Citrus Sinensis ID: 023689

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------28
Protein Sequence
MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHS
Secondary Structure (PSIPRED)
ccccccccccEEEEEccccHHHHHHHHHHHHccccEEEEEEccccccHHHHcccccccccEEEEEccccccccHHHHHccccEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHccccEEEEEcccEEEEcccccccccccccccccHHHHHHccccHHHHHHHHHHHHHHHHHHccccEEEEEcccccccccccccccHHHHHHHHHccccccccccccccEEHHHHHHHHHHHHccccccccEEEEcccccHHHHHHHHHHHcccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccEEEEEccHHHHHHHHHHHHHHcccEEEEEEEccccccHHHHHHccccHHccEEEEEcccccccHHHHHccccEEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccEEEcccccccccccccccccHHHHHHcccEEHHHHHHHHHHHHHHHHHccccEEEEEccEEEcccccccccHHHHHHHHHHcccHHHHHHHHEcEEEHHHHHHHHHHHHcccccccEEEEEcccccHHHHHHHHHHHcccccccc
Coil and Loop (DISEMBL)
MASEAEKEEETVCVTGANGFIGTWLVKTLLdnnytsinatvfpgsdsshlfalpgagdanlRVFEADVLDSGAVSRAVEGckgvfhvaspctledpvdpekeliLPAVQGTLNVLEAAKRFGVRRVVVTSSIsaivpnpgwkgkvfdetswtdleycksrkkwypvSKTLAEKAAWEFAEKHgvdvvaihpatclgplmqpylNASCAVLQQLLQgskdtqeyhwlgavpvkdVAKAQVLLFespaasgrylctnGIYQFGDFAERvsklfpefpvhs
Flexible Loop (DISEMBL)
maseaekeeetvcvtgangFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTssisaivpnpgwkgkvfdetsWTDLeycksrkkwypVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFespaasgrylCTNGIYQFGDFAERVSKLFPEFPVHS
Low Complexity Region (SEG)
MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHS
Disordered region (IsUnstruct)
**********TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFP******
Disordered Region (DISOPRED)
*************VTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPV**
Disordered Region (DISEMBL)
***********VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHS
Disordered Region (DISPRO)
********EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHS
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	278	2.2.26 [Sep-21-2011]
Q500U8	326	Tetraketide alpha-pyrone	no	no	0.938	0.800	0.393	4e-53
Q9S9N9	344	Cinnamoyl-CoA reductase 1	no	no	0.935	0.755	0.440	1e-49
Q9SAH9	332	Cinnamoyl-CoA reductase 2	no	no	0.928	0.777	0.425	6e-47
Q9XES5	348	Bifunctional dihydroflavo	N/A	no	0.956	0.764	0.362	5e-45
Q84KP0	347	Bifunctional dihydroflavo	N/A	no	0.956	0.766	0.358	2e-44
P51110	337	Dihydroflavonol-4-reducta	no	no	0.953	0.786	0.375	1e-43
P51102	382	Dihydroflavonol-4-reducta	no	no	0.953	0.693	0.395	2e-42
P14720	380	Dihydroflavonol-4-reducta	N/A	no	0.928	0.678	0.388	8e-42
P51104	360	Dihydroflavonol-4-reducta	N/A	no	0.928	0.716	0.372	1e-41
P51106	354	Dihydroflavonol-4-reducta	N/A	no	0.910	0.714	0.370	8e-41

>sp|Q500U8|TKPR1_ARATH Tetraketide alpha-pyrone reductase 1 OS=Arabidopsis thaliana GN=TKPR1 PE=2 SV=1

 Score =  208 bits (529), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 107/272 (39%), Positives = 177/272 (65%), Gaps = 11/272 (4%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS--SHLFALPGAGDANLRVFEADVL 69
           VCVTGA+GF+ +WLVK LL   Y  I     PG++   +HL+ L GA +  LR+ +AD++
Sbjct: 8   VCVTGASGFLASWLVKRLLLEGYEVIGTVRDPGNEKKLAHLWKLEGAKE-RLRLVKADLM 66

Query: 70  DSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-GVRRVVV 128
           + G+   A+ GC+GVFH ASP  L+   +PE+E++ PA++GTLNVL + ++   ++RVV+
Sbjct: 67  EEGSFDNAIMGCQGVFHTASP-VLKPTSNPEEEILRPAIEGTLNVLRSCRKNPSLKRVVL 125

Query: 129 TSSISAIVPNPGWKGKV-FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVV 187
           TSS S +     +  K+  DE+ WT +E CK  + WY +SKTLAE+AAW+F+E++G+D+V
Sbjct: 126 TSSSSTVRIRDDFDPKIPLDESIWTSVELCKRFQVWYALSKTLAEQAAWKFSEENGIDLV 185

Query: 188 AIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW---LGAVPVKDVAKAQVLLFES 244
            + P+  +GP + P L ++ + +  LL+G  +T+++ W   +G V + DVA+  +++FE 
Sbjct: 186 TVLPSFLVGPSLPPDLCSTASDVLGLLKG--ETEKFQWHGQMGYVHIDDVARTHIVVFEH 243

Query: 245 PAASGRYLCTNGIYQFGDFAERVSKLFPEFPV 276
            AA GRY+C++ +    +    +S  +P  P+
Sbjct: 244 EAAQGRYICSSNVISLEELVSFLSARYPSLPI 275

Involved in the biosynthesis of hydroxylated tetraketide compounds that serve as sporopollenin precursors (the main constituents of exine). Is essential for pollen wall development. Acts on tetraketide alpha-pyrones and reduces the carbonyl function on the tetraketide alkyl chain to a secondary alcohol function.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: -

>sp|Q9S9N9|CCR1_ARATH Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1

 Score =  196 bits (499), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 119/270 (44%), Positives = 170/270 (62%), Gaps = 10/270 (3%)

Query: 10  ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD--SSHLFALPGAGDANLRVFEAD 67
           +TVCVTGA G+I +W+VK LL+  YT +  TV    D  ++HL  L G G   L + +AD
Sbjct: 11  KTVCVTGAGGYIASWIVKILLERGYT-VKGTVRNPDDPKNTHLRELEG-GKERLILCKAD 68

Query: 68  VLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVV 127
           + D  A+  A++GC GVFH ASP T +DP    ++++ PAV G   V+ AA    V+RVV
Sbjct: 69  LQDYEALKAAIDGCDGVFHTASPVT-DDP----EQMVEPAVNGAKFVINAAAEAKVKRVV 123

Query: 128 VTSSISAIVPNPGWKGK-VFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDV 186
           +TSSI A+  +P    + V DE+ W+DL++CK+ K WY   K +AE+AAWE A++ GVD+
Sbjct: 124 ITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEKGVDL 183

Query: 187 VAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA 246
           V ++P   LGP +QP +NAS   + + L GS  T        V V+DVA A VL++E+P+
Sbjct: 184 VVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALAHVLVYEAPS 243

Query: 247 ASGRYLCTNGIYQFGDFAERVSKLFPEFPV 276
           ASGRYL        G+  E ++KLFPE+P+
Sbjct: 244 ASGRYLLAESARHRGEVVEILAKLFPEYPL 273

Involved in the latter stages of lignin biosynthesis. Catalyzes one of the last steps of monolignol biosynthesis, the conversion of cinnamoyl-CoAs into their corresponding cinnamaldehydes.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 4

EC: 4

>sp|Q9SAH9|CCR2_ARATH Cinnamoyl-CoA reductase 2 OS=Arabidopsis thaliana GN=CCR2 PE=1 SV=1

 Score =  187 bits (475), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 114/268 (42%), Positives = 164/268 (61%), Gaps = 10/268 (3%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD--SSHLFALPGAGDANLRVFEADVL 69
           VCVTGA G+I +W+VK LL+  YT +  TV   +D  ++HL  L GA +  L +  AD+L
Sbjct: 8   VCVTGAGGYIASWIVKLLLERGYT-VRGTVRNPTDPKNNHLRELQGAKE-RLTLHSADLL 65

Query: 70  DSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVT 129
           D  A+   ++GC GVFH ASP T +DP    + ++ PAV G   V++AA +  V+RVV T
Sbjct: 66  DYEALCATIDGCDGVFHTASPMT-DDP----ETMLEPAVNGAKFVIDAAAKAKVKRVVFT 120

Query: 130 SSISAIVPNPGWKGK-VFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVA 188
           SSI A+  NP    + + DE  W+DL++CK+ K WY   K LAE++AWE A+  GVD+V 
Sbjct: 121 SSIGAVYMNPNRDTQAIVDENCWSDLDFCKNTKNWYCYGKMLAEQSAWETAKAKGVDLVV 180

Query: 189 IHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAAS 248
           ++P   LGP +Q  +NAS   + + L GS  T        V V+DVA   VL++E+P+AS
Sbjct: 181 LNPVLVLGPPLQSAINASLVHILKYLTGSAKTYANLTQVYVDVRDVALGHVLVYEAPSAS 240

Query: 249 GRYLCTNGIYQFGDFAERVSKLFPEFPV 276
           GRY+        G+  E ++K FPE+P+
Sbjct: 241 GRYILAETALHRGEVVEILAKFFPEYPL 268

Cinnamoyl-CoA reductase probably involved in the formation of phenolic compounds associated with the hypersensitive response. Seems not to be involved in lignin biosynthesis.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 4

EC: 4

>sp|Q9XES5|DFRA_MALDO Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Malus domestica GN=DFR PE=1 SV=1

 Score =  181 bits (459), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 100/276 (36%), Positives = 164/276 (59%), Gaps = 10/276 (3%)

Query: 8   EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS---HLFALPGAGDANLRVF 64
           E E+VCVTGA+GFIG+WLV  LL++ YT + ATV   ++     HL  LP A + +L ++
Sbjct: 4   ESESVCVTGASGFIGSWLVMRLLEHGYT-VRATVRDPTNQKKVKHLLDLPKA-ETHLTLW 61

Query: 65  EADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR 124
           +AD+ D G+   A++GC GVFHVA+P   E   DPE E+I P + G L++L+A ++    
Sbjct: 62  KADLADEGSFDEAIQGCSGVFHVATPMDFESK-DPENEVIKPTINGLLDILKACQKAKTV 120

Query: 125 RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK--W-YPVSKTLAEKAAWEFAEK 181
           R +V +S +  V     +  V+DE++W+D+E+C+S K   W Y VSKTLAE+AAW++A++
Sbjct: 121 RKLVFTSSAGTVNVEEHQKPVYDESNWSDVEFCRSVKMTGWMYFVSKTLAEQAAWKYAKE 180

Query: 182 HGVDVVAIHPATCLGPLMQPYLNASCAV-LQQLLQGSKDTQEYHWLGAVPVKDVAKAQVL 240
           + +D + I P   +GP + P +  S    L  +L+             V + D+  + + 
Sbjct: 181 NNIDFITIIPTLVIGPFLMPSMPPSLITGLSPILRNESHYGIIKQGQYVHLDDLCLSHIY 240

Query: 241 LFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPV 276
           L+E P A GRY+C++      +  + + + +PE+ +
Sbjct: 241 LYEHPKAEGRYICSSHDATIHELVKMLREKYPEYNI 276

Bifunctional enzyme involved in the flavonoid metabolism. May use dihydroquercetin, dihydrokaempferol, eriodictyol, garbanzol (5-deoxydihydrokaempferol), dihydrofisetin (5-deoxydihydroquercetin), naringenin to a low extent (10%), but not 5-deoxynaringenin or butin (5-deoxyeriodictyol) as substrate.

Malus domestica (taxid: 3750)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 3

EC: 4

>sp|Q84KP0|DFRA_PYRCO Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Pyrus communis GN=DFR PE=1 SV=1

 Score =  179 bits (455), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 99/276 (35%), Positives = 164/276 (59%), Gaps = 10/276 (3%)

Query: 8   EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS---HLFALPGAGDANLRVF 64
           E E+VCVTGA+GFIG+WLV  LL++ YT + ATV   ++     HL  LP A + +L ++
Sbjct: 4   ESESVCVTGASGFIGSWLVMRLLEHGYT-VRATVRDPTNQKKVKHLLDLPKA-ETHLTLW 61

Query: 65  EADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR 124
           +AD+ D G+   A++GC GVFHVA+P   E   DPE E+I P + G L++L+A ++    
Sbjct: 62  KADLADEGSFDEAIQGCSGVFHVATPMDFESR-DPENEVIKPTINGLLDILKACQKAKTV 120

Query: 125 RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK--W-YPVSKTLAEKAAWEFAEK 181
           R +V +S +  V     +  V+DE++W+D+E+C+S K   W Y VSKTLAE+AAW++A++
Sbjct: 121 RKLVFTSSAGTVNVEEHQKPVYDESNWSDVEFCRSVKMTGWMYFVSKTLAEQAAWKYAKE 180

Query: 182 HGVDVVAIHPATCLGPLMQPYLNASCAV-LQQLLQGSKDTQEYHWLGAVPVKDVAKAQVL 240
           + +D + I P   +GP + P +  S    L  +L+             V + D+  + + 
Sbjct: 181 NNIDFITIIPTLVIGPFLMPSMPPSLITGLSPILRNESHYGIIKQGQYVHLDDLCLSHIY 240

Query: 241 LFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPV 276
           L++ P A GRY+C++      +  + + + +PE+ +
Sbjct: 241 LYKHPKAEGRYICSSHDATIHELVKMLREKYPEYNI 276

Bifunctional enzyme involved in the flavonoid metabolism. May use dihydroquercetin, eriodictyol, garbanzol (5-deoxydihydrokaempferol), dihydrofisetin (5-deoxydihydroquercetin), dihydrokaempferol to a low extent (5%), but not naringenin, 5-deoxynaringenin or butin (5-deoxyeriodictyol) as substrate.

Pyrus communis (taxid: 23211)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 3

EC: 4

>sp|P51110|DFRA_VITVI Dihydroflavonol-4-reductase OS=Vitis vinifera GN=DFR PE=1 SV=1

 Score =  176 bits (447), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 104/277 (37%), Positives = 166/277 (59%), Gaps = 12/277 (4%)

Query: 8   EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS---HLFALPGAGDANLRVF 64
           + ETVCVTGA+GFIG+WLV  LL+   T + ATV   ++     HL  LP A + +L ++
Sbjct: 4   QSETVCVTGASGFIGSWLVMRLLERRLT-VRATVRDPTNVKKVKHLLDLPKA-ETHLTLW 61

Query: 65  EADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEA-AKRFGV 123
           +AD+ D G+   A++GC GVFHVA+P   E   DPE E+I P ++G L ++++ A    V
Sbjct: 62  KADLADEGSFDEAIKGCTGVFHVATPMDFESK-DPENEVIKPTIEGMLGIMKSCAAAKTV 120

Query: 124 RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK--W-YPVSKTLAEKAAWEFAE 180
           RR+V TSS +  V     +  V+DE+ W+D+E+C+++K   W Y VSKTLAE+AAW++A+
Sbjct: 121 RRLVFTSS-AGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAK 179

Query: 181 KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA-VPVKDVAKAQV 239
           ++ +D + I P   +GP +   +  S       + G++        G  V + D+  A +
Sbjct: 180 ENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDDLCNAHI 239

Query: 240 LLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPV 276
            LFE+P A GRY+C++      D A+ + + +PE+ +
Sbjct: 240 YLFENPKAEGRYICSSHDCIILDLAKMLREKYPEYNI 276

Vitis vinifera (taxid: 29760)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|P51102|DFRA_ARATH Dihydroflavonol-4-reductase OS=Arabidopsis thaliana GN=DFRA PE=3 SV=2

 Score =  172 bits (436), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/281 (39%), Positives = 161/281 (57%), Gaps = 16/281 (5%)

Query: 8   EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVF-PGS--DSSHLFALPGAGDANLRVF 64
           ++ETVCVTGA+GFIG+WLV  LL+  Y  + ATV  PG+     HL  LP A    L ++
Sbjct: 4   QKETVCVTGASGFIGSWLVMRLLERGYF-VRATVRDPGNLKKVQHLLDLPNAKTL-LTLW 61

Query: 65  EADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEA-AKRFGV 123
           +AD+ + G+   A+ GC GVFHVA+P   E   DPE E+I P V G L +++A  K   V
Sbjct: 62  KADLSEEGSYDDAINGCDGVFHVATPMDFESK-DPENEVIKPTVNGMLGIMKACVKAKTV 120

Query: 124 RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK--W-YPVSKTLAEKAAWEFAE 180
           RR V TSS   +      K  V+DE  W+DLE+  S+K   W Y VSKTLAEKAAW+FAE
Sbjct: 121 RRFVFTSSAGTVNVEEHQKN-VYDENDWSDLEFIMSKKMTGWMYFVSKTLAEKAAWDFAE 179

Query: 181 KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA---VPVKDVAKA 237
           + G+D ++I P   +GP +   +  S  ++  L   +++   Y  +     V + D+  A
Sbjct: 180 EKGLDFISIIPTLVVGPFITTSMPPS--LITALSPITRNEAHYSIIRQGQYVHLDDLCNA 237

Query: 238 QVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHS 278
            + L+E  AA GRY+C++        ++ +   +PE+ V S
Sbjct: 238 HIFLYEQAAAKGRYICSSHDATILTISKFLRPKYPEYNVPS 278

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|P14720|DFRA_PETHY Dihydroflavonol-4-reductase OS=Petunia hybrida GN=DFRA PE=2 SV=2

 Score =  170 bits (431), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 108/278 (38%), Positives = 161/278 (57%), Gaps = 20/278 (7%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS---HLFALPGAGDANLRVFEAD 67
           TVCVTGA GFIG+WLV  LL+  Y +++ATV    +     HL  LP A D NL +++AD
Sbjct: 17  TVCVTGAAGFIGSWLVMRLLERGY-NVHATVRDPENKKKVKHLLELPKA-DTNLTLWKAD 74

Query: 68  VLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEA-AKRFGVRRV 126
           +   G+   A++GC+GVFHVA+P   E   DPE E+I P V+G L+++E+ AK   V+R+
Sbjct: 75  LTVEGSFDEAIQGCQGVFHVATPMDFESK-DPENEVIKPTVRGMLSIIESCAKANTVKRL 133

Query: 127 VVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK--W-YPVSKTLAEKAAWEFAEKHG 183
           V TSS   +      K   +D+TSW+DL++  ++K   W Y  SK LAEKAA E A+K  
Sbjct: 134 VFTSSAGTLDVQEQQK-LFYDQTSWSDLDFIYAKKMTGWMYFASKILAEKAAMEEAKKKN 192

Query: 184 VDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL-----GAVPVKDVAKAQ 238
           +D ++I P   +GP + P    S      L+ G+    E H+        V + D+ +A 
Sbjct: 193 IDFISIIPPLVVGPFITPTFPPSLITALSLITGN----EAHYCIIKQGQYVHLDDLCEAH 248

Query: 239 VLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPV 276
           + L+E P A GR++C++      D A+ V + +PE+ V
Sbjct: 249 IFLYEHPKADGRFICSSHHAIIYDVAKMVREKWPEYYV 286

Petunia hybrida (taxid: 4102)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|P51104|DFRA_DIACA Dihydroflavonol-4-reductase OS=Dianthus caryophyllus GN=A PE=2 SV=1

 Score =  169 bits (429), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 104/279 (37%), Positives = 164/279 (58%), Gaps = 21/279 (7%)

Query: 10  ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS---SHLFALPGAGDANLRVFEA 66
           ETVCVTGA+GFIG+WL+  LL+  YT + ATV    ++    HL  LP A   NL +++A
Sbjct: 23  ETVCVTGASGFIGSWLIMRLLERGYT-VRATVRDPDNTKKVQHLLDLPNA-KTNLTLWKA 80

Query: 67  DVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRV 126
           D+ + G+   AV+GC GVFH+A+P   E   DPE E+I P + G L++L++  +  +RRV
Sbjct: 81  DLHEEGSFDAAVDGCTGVFHIATPMDFESK-DPENEMIKPTINGMLDILKSCVKAKLRRV 139

Query: 127 VVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK--W-YPVSKTLAEKAAWEFAEKHG 183
           V TSS    V     +  V+DET W+ L++ +S K   W Y VSK LAE+AAW++A ++ 
Sbjct: 140 VFTSS-GGTVNVEATQKPVYDETCWSALDFIRSVKMTGWMYFVSKILAEQAAWKYAAENN 198

Query: 184 VDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA---VPVKDVAKAQVL 240
           ++ ++I P   +GP + P +  S  ++  L   ++    Y  +     V + D+  + + 
Sbjct: 199 LEFISIIPPLVVGPFIMPSMPPS--LITALSPITRTESHYTIIKQGQFVHLDDLCMSHIF 256

Query: 241 LFESPAASGRYL---CTNGIYQFGDFAERVSKLFPEFPV 276
           L+E+P A+GRY+   C   IY   D A+ + + +PE+ V
Sbjct: 257 LYENPKANGRYIASACAATIY---DIAKMLREEYPEYNV 292

Dianthus caryophyllus (taxid: 3570)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|P51106|DFRA_HORVU Dihydroflavonol-4-reductase OS=Hordeum vulgare GN=ANT18 PE=3 SV=1

 Score =  167 bits (423), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 104/281 (37%), Positives = 159/281 (56%), Gaps = 28/281 (9%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD---SSHLFALPGAGDANLRVFEADV 68
           V VTGA+GF+G+WLV  LL   YT + ATV   ++   +  L  LPGA +  L +++AD+
Sbjct: 8   VVVTGASGFVGSWLVMKLLQAGYT-VRATVRDPANVEKTKPLLELPGAKE-RLSIWKADL 65

Query: 69  LDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRRVV 127
            + G+ + A+ GC GVFHVA+P    D  DPE E+I P V+G L+++ A K  G V+R+V
Sbjct: 66  SEDGSFNEAIAGCTGVFHVATPMDF-DSQDPENEVIKPTVEGMLSIMRACKEAGTVKRIV 124

Query: 128 VTSSISAI----VPNPGWKGKVFDETSWTDLEYCKSRKK--W-YPVSKTLAEKAAWEFAE 180
            TSS  ++     P P      +D+ +W+D++YC+  K   W Y VSK LAEKAA E+A 
Sbjct: 125 FTSSAGSVNIEERPRPA-----YDQDNWSDIDYCRRVKMTGWMYFVSKALAEKAAMEYAS 179

Query: 181 KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW-----LGAVPVKDVA 235
           ++G+D ++I P   +GP +   +  S      L+ G+    E H+     +  V + D+ 
Sbjct: 180 ENGLDFISIIPTLVVGPFLSAGMPPSLVTALALITGN----EAHYSILKQVQLVHLDDLC 235

Query: 236 KAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPV 276
            A   LFE P A+GRY+C++        A  +   FPE+ +
Sbjct: 236 DAMTFLFEHPEANGRYICSSHDATIHGLARMLQDRFPEYDI 276

Hordeum vulgare (taxid: 4513)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	278
225465312	333	PREDICTED: bifunctional dihydroflavonol	0.985	0.822	0.789	1e-128
224129534	330	predicted protein [Populus trichocarpa]	0.974	0.821	0.791	1e-128
255556687	334	cinnamoyl-CoA reductase, putative [Ricin	0.992	0.826	0.766	1e-126
449478087	326	PREDICTED: tetraketide alpha-pyrone redu	0.971	0.828	0.766	1e-121
449431910	326	PREDICTED: tetraketide alpha-pyrone redu	0.971	0.828	0.762	1e-121
15226955	318	Rossmann-fold NAD(P)-binding domain-cont	0.964	0.842	0.718	1e-117
297817868	318	cinnamoyl-CoA reductase family [Arabidop	0.964	0.842	0.711	1e-116
357448325	333	Dihydroflavonol-4-reductase [Medicago tr	0.985	0.822	0.669	1e-105
147765772	293	hypothetical protein VITISV_004153 [Viti	0.845	0.802	0.686	1e-105
356555831	330	PREDICTED: bifunctional dihydroflavonol	0.982	0.827	0.675	1e-101

>gi|225465312|ref|XP_002269382.1| PREDICTED: bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase [Vitis vinifera] gi|297739432|emb|CBI29614.3| unnamed protein product [Vitis vinifera]

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 217/275 (78%), Positives = 253/275 (92%), Gaps = 1/275 (0%)

Query: 4   EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRV 63
           EA+K++E VCVTGANGFIG+WLV+TL+++ YT+I+A++FPGSD+SHLF+LPGA  A++ V
Sbjct: 5   EADKKKEAVCVTGANGFIGSWLVRTLVEHGYTTIHASIFPGSDASHLFSLPGAAAADIVV 64

Query: 64  FEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV 123
           +EAD+LD+ AV+RAVEGC GVFHVASPC+LEDP DPEKEL++PAV+GT NVLEAA+RF V
Sbjct: 65  YEADLLDAEAVARAVEGCTGVFHVASPCSLEDPKDPEKELLMPAVEGTKNVLEAARRFQV 124

Query: 124 RRVVVTSSISAIVPNPGWKGKV-FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH 182
           RRVV+TSSISA+VPNP W   + F+ETSWTDL YCKSR+KWYPVSKTLAEKAAWEFA KH
Sbjct: 125 RRVVLTSSISALVPNPSWPPNIPFNETSWTDLHYCKSRQKWYPVSKTLAEKAAWEFAGKH 184

Query: 183 GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLF 242
           G+DVVAIHPATCLG L+QP LNASCAVLQQLL+GS +TQEYHWLGAV VKDVAKAQVLLF
Sbjct: 185 GIDVVAIHPATCLGELLQPRLNASCAVLQQLLEGSTETQEYHWLGAVHVKDVAKAQVLLF 244

Query: 243 ESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVH 277
           E+PAASGRYLCT+GIYQF DFAERVSKLFPEFPVH
Sbjct: 245 ETPAASGRYLCTDGIYQFADFAERVSKLFPEFPVH 279

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224129534|ref|XP_002328740.1| predicted protein [Populus trichocarpa] gi|222839038|gb|EEE77389.1| predicted protein [Populus trichocarpa]

 Score =  464 bits (1193), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 217/274 (79%), Positives = 250/274 (91%), Gaps = 3/274 (1%)

Query: 7   KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDAN--LRVF 64
           K++E VCVTGANGFIG+WLV+TLLD  YT I+A+++PGSD SHLF +PGA DA+  L VF
Sbjct: 3   KQKEAVCVTGANGFIGSWLVRTLLDQGYTKIHASIYPGSDPSHLFEIPGATDASVSLEVF 62

Query: 65  EADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR 124
           EADVLD  A+ +AVEGC+GVFHVASPCTLEDP DP++EL++PAVQGTLNVLEAAK+F VR
Sbjct: 63  EADVLDHDAICKAVEGCQGVFHVASPCTLEDPKDPQEELVMPAVQGTLNVLEAAKKFKVR 122

Query: 125 RVVVTSSISAIVPNPGW-KGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHG 183
           RVVVTSSISA+VPNP W + KVFDE+SWTDL+YCKSR+KWYPVSKTLAEKAAWEFA ++G
Sbjct: 123 RVVVTSSISALVPNPSWPREKVFDESSWTDLDYCKSRQKWYPVSKTLAEKAAWEFAGRNG 182

Query: 184 VDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFE 243
           +DVVAIHPATCLGPL+QP LNASCAVLQQLLQGS+DTQEYHWLGAV V+DVA+AQVLLFE
Sbjct: 183 MDVVAIHPATCLGPLLQPALNASCAVLQQLLQGSRDTQEYHWLGAVHVRDVARAQVLLFE 242

Query: 244 SPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVH 277
           +P ASGRYLCTNGIYQFGDFA  VS+LFPEFP+H
Sbjct: 243 TPTASGRYLCTNGIYQFGDFAATVSRLFPEFPLH 276

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255556687|ref|XP_002519377.1| cinnamoyl-CoA reductase, putative [Ricinus communis] gi|223541444|gb|EEF42994.1| cinnamoyl-CoA reductase, putative [Ricinus communis]

 Score =  456 bits (1173), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 217/283 (76%), Positives = 256/283 (90%), Gaps = 7/283 (2%)

Query: 1   MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGA---G 57
           MA++ +KE   VCVTGANGFIG+WL++TLL + YT+I+A+++P SD SHLF L  +   G
Sbjct: 1   MATQNKKE--AVCVTGANGFIGSWLIQTLLQHGYTTIHASIYPASDPSHLFHLISSSSHG 58

Query: 58  DA-NLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLE 116
           D  NL+++EAD+LD  A+ +AVEGC+GVFHVASPCTLE+P DPEKEL+LPAVQGT+NVLE
Sbjct: 59  DIINLKLYEADLLDYDAICKAVEGCQGVFHVASPCTLEEPKDPEKELVLPAVQGTINVLE 118

Query: 117 AAKRFGVRRVVVTSSISAIVPNPGW-KGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAA 175
           AA++F VRRVV+TSSISA+VPNP W  GKVFDE+SWTDL+YCKSR+KWYPVSK+LAEKAA
Sbjct: 119 AARKFKVRRVVLTSSISALVPNPNWPAGKVFDESSWTDLDYCKSRQKWYPVSKSLAEKAA 178

Query: 176 WEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVA 235
           WEFAEKHG+DVVAIHP+TC+GPL+QP LNAS AVLQQLL+GSKDTQEYHWLGAV VKDVA
Sbjct: 179 WEFAEKHGMDVVAIHPSTCIGPLLQPSLNASSAVLQQLLEGSKDTQEYHWLGAVHVKDVA 238

Query: 236 KAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHS 278
           KAQVLLFE+P+ASGRYLCTNGIYQFGDFA+RVSKLFPEFPVHS
Sbjct: 239 KAQVLLFEAPSASGRYLCTNGIYQFGDFADRVSKLFPEFPVHS 281

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449478087|ref|XP_004155219.1| PREDICTED: tetraketide alpha-pyrone reductase 1-like [Cucumis sativus]

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 210/274 (76%), Positives = 245/274 (89%), Gaps = 4/274 (1%)

Query: 7   KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAG-DANLRVF 64
           KE+E VCVTGANGFIG+W+V+ LL++ YT+I+ ++FPGSDSSHL   LP    +ANLRVF
Sbjct: 5   KEKEPVCVTGANGFIGSWVVRALLESGYTTIHTSIFPGSDSSHLLNLLPSTNPNANLRVF 64

Query: 65  EADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR 124
           EAD++D  AV+RAVEGCKGVFH+ASPCTLEDPVDP+KEL+ PAVQGT+NVL AAK+FGVR
Sbjct: 65  EADLMDGEAVARAVEGCKGVFHIASPCTLEDPVDPQKELVEPAVQGTVNVLNAAKKFGVR 124

Query: 125 RVVVTSSISAIVPNPGWKGKV-FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHG 183
           RVV+TSSISA+VPNPGW   + FDE+SWTDLEYC SRKKWYPVSKTLAEK+AWEFAE HG
Sbjct: 125 RVVLTSSISALVPNPGWPSHMPFDESSWTDLEYCISRKKWYPVSKTLAEKSAWEFAENHG 184

Query: 184 VDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFE 243
           +DVV+I PATCLGPL+QP LNASCAVLQQLL GS+DTQEYHWLGAV VKDVAKAQ+LLFE
Sbjct: 185 LDVVSILPATCLGPLLQPTLNASCAVLQQLLHGSQDTQEYHWLGAVHVKDVAKAQILLFE 244

Query: 244 SPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVH 277
           SP  SGRYLCTNGIYQF +FA++V+K+ P+FPVH
Sbjct: 245 SP-TSGRYLCTNGIYQFSEFADKVAKICPQFPVH 277

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449431910|ref|XP_004133743.1| PREDICTED: tetraketide alpha-pyrone reductase 1-like [Cucumis sativus]

 Score =  440 bits (1131), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 209/274 (76%), Positives = 245/274 (89%), Gaps = 4/274 (1%)

Query: 7   KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAG-DANLRVF 64
           KE+E VCVTGANGFIG+W+V+ LL++ YT+I+ ++FPGSDSSHL   LP    +ANLR+F
Sbjct: 5   KEKEPVCVTGANGFIGSWVVRALLESGYTTIHTSIFPGSDSSHLLNLLPSTNPNANLRIF 64

Query: 65  EADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR 124
           EAD++D  AV+RAVEGCKGVFH+ASPCTLEDPVDP+KEL+ PAVQGT+NVL AAK+FGVR
Sbjct: 65  EADLMDGEAVARAVEGCKGVFHIASPCTLEDPVDPQKELVEPAVQGTVNVLNAAKKFGVR 124

Query: 125 RVVVTSSISAIVPNPGWKGKV-FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHG 183
           RVV+TSSISA+VPNPGW   + FDE+SWTDLEYC SRKKWYPVSKTLAEK+AWEFAE HG
Sbjct: 125 RVVLTSSISALVPNPGWPSHMPFDESSWTDLEYCISRKKWYPVSKTLAEKSAWEFAENHG 184

Query: 184 VDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFE 243
           +DVV+I PATCLGPL+QP LNASCAVLQQLL GS+DTQEYHWLGAV VKDVAKAQ+LLFE
Sbjct: 185 LDVVSILPATCLGPLLQPTLNASCAVLQQLLHGSQDTQEYHWLGAVHVKDVAKAQILLFE 244

Query: 244 SPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVH 277
           SP  SGRYLCTNGIYQF +FA++V+K+ P+FPVH
Sbjct: 245 SP-TSGRYLCTNGIYQFSEFADKVAKICPQFPVH 277

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15226955|ref|NP_178345.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|3894172|gb|AAC78522.1| putative cinnamoyl-CoA reductase [Arabidopsis thaliana] gi|28973736|gb|AAO64184.1| putative cinnamoyl-CoA reductase [Arabidopsis thaliana] gi|29824207|gb|AAP04064.1| putative cinnamoyl-CoA reductase [Arabidopsis thaliana] gi|110736834|dbj|BAF00375.1| putative cinnamoyl-CoA reductase [Arabidopsis thaliana] gi|330250482|gb|AEC05576.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana]

 Score =  426 bits (1096), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 194/270 (71%), Positives = 238/270 (88%), Gaps = 2/270 (0%)

Query: 9   EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADV 68
           +ETVCVTGANGFIG+W+++TL++  YT I+A+++PGSD +HL  LPG+ D+ +++FEAD+
Sbjct: 3   KETVCVTGANGFIGSWIIRTLIEKGYTKIHASIYPGSDPTHLLQLPGS-DSKIKIFEADL 61

Query: 69  LDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVV 128
           LDS A+SRA++GC GVFHVASPCTL+ PVDPEKEL+ PAV+GT+NVLEAAKRF VRRVV+
Sbjct: 62  LDSDAISRAIDGCAGVFHVASPCTLDPPVDPEKELVEPAVKGTINVLEAAKRFNVRRVVI 121

Query: 129 TSSISAIVPNPGWKGKV-FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVV 187
           TSSISA+VPNP W  KV  DE+SW+DL++CKSR+KWYP+SKTLAEKAAWEF+EKHG ++V
Sbjct: 122 TSSISALVPNPNWPEKVPVDESSWSDLDFCKSRQKWYPISKTLAEKAAWEFSEKHGTNIV 181

Query: 188 AIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAA 247
            IHP+TCLGPL+QP LNASCAVL QLLQGS +TQE+HWLG V VKDVAK  V+LFE+P A
Sbjct: 182 TIHPSTCLGPLLQPNLNASCAVLLQLLQGSTETQEHHWLGVVHVKDVAKGHVMLFETPDA 241

Query: 248 SGRYLCTNGIYQFGDFAERVSKLFPEFPVH 277
           SGR+LCTNGIYQF +FA  VSKLFPEF VH
Sbjct: 242 SGRFLCTNGIYQFSEFAALVSKLFPEFAVH 271

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297817868|ref|XP_002876817.1| cinnamoyl-CoA reductase family [Arabidopsis lyrata subsp. lyrata] gi|297322655|gb|EFH53076.1| cinnamoyl-CoA reductase family [Arabidopsis lyrata subsp. lyrata]

 Score =  422 bits (1086), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 192/270 (71%), Positives = 237/270 (87%), Gaps = 2/270 (0%)

Query: 9   EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADV 68
           +ETVCVTGANGFIG+W+++TL++  YT I+A+V+PGSD +HL  LPG+ D+ +++FEAD+
Sbjct: 3   KETVCVTGANGFIGSWIIRTLIEKGYTKIHASVYPGSDPTHLLKLPGS-DSKIKIFEADL 61

Query: 69  LDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVV 128
           LDS A+SRA++GC GVFHVASPCTL+ PV+PEKEL+ PAV+GT+NVLEAAKRF VRRVV+
Sbjct: 62  LDSDAISRAIDGCAGVFHVASPCTLDPPVNPEKELVEPAVKGTINVLEAAKRFNVRRVVI 121

Query: 129 TSSISAIVPNPGWKGKV-FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVV 187
           TSSISA+VPNP W  +V  DE+SWTDL++CKS +KWYP+SKTLAEKAAWEF+EKHG ++V
Sbjct: 122 TSSISALVPNPNWPERVPVDESSWTDLDFCKSMQKWYPISKTLAEKAAWEFSEKHGTNIV 181

Query: 188 AIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAA 247
            IHP+TCLGPL+QP LNASCAVL QLLQGS +TQE+HWLG V V+DVAK  V+LFE+P A
Sbjct: 182 TIHPSTCLGPLLQPNLNASCAVLLQLLQGSTETQEHHWLGVVHVRDVAKGHVMLFETPEA 241

Query: 248 SGRYLCTNGIYQFGDFAERVSKLFPEFPVH 277
           SGR+LCTNGIYQF +FA  VSKLFPEF VH
Sbjct: 242 SGRFLCTNGIYQFSEFAALVSKLFPEFAVH 271

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357448325|ref|XP_003594438.1| Dihydroflavonol-4-reductase [Medicago truncatula] gi|355483486|gb|AES64689.1| Dihydroflavonol-4-reductase [Medicago truncatula]

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 186/278 (66%), Positives = 222/278 (79%), Gaps = 4/278 (1%)

Query: 5   AEKEEETVCVTGANGFIGTWLVKTLL--DNNYTSINATVFPGSDSSHLFALPGAGDANLR 62
           +E  EE VCVTGANGFIG+WLV TLL   N +  I+AT+FP SD SHLF L     + + 
Sbjct: 3   SENREEVVCVTGANGFIGSWLVHTLLSKQNPHYKIHATIFPNSDPSHLFTLHPEAQSRIT 62

Query: 63  VFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG 122
           +F  ++LDS AVS A+ GC GVFHVASPCTLEDP DP+KEL+ PAVQGTLNVLEA+KR G
Sbjct: 63  IFPVNILDSTAVSNAINGCSGVFHVASPCTLEDPTDPQKELLEPAVQGTLNVLEASKRAG 122

Query: 123 VRRVVVTSSISAIVPNPGW-KGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK 181
           V+RVV+TSSISA+VPNP W + K  DE SWTD+EYCK R KWYPVSKT AEK AWEF EK
Sbjct: 123 VKRVVLTSSISAMVPNPNWPENKAIDEGSWTDVEYCKLRGKWYPVSKTEAEKVAWEFCEK 182

Query: 182 H-GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVL 240
           H GVDVVA+HP TCLGPL+Q  +NAS AVLQ+L+ G KDTQE +WLGAV VKDVA+A VL
Sbjct: 183 HSGVDVVAVHPGTCLGPLLQNQMNASSAVLQRLMMGEKDTQECYWLGAVHVKDVARAHVL 242

Query: 241 LFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHS 278
           ++E+P A+GRYLC NGIYQF  FA+ VS+L+ ++P+HS
Sbjct: 243 VYETPTAAGRYLCVNGIYQFSSFAKIVSELYHDYPIHS 280

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147765772|emb|CAN68983.1| hypothetical protein VITISV_004153 [Vitis vinifera]

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 188/274 (68%), Positives = 220/274 (80%), Gaps = 39/274 (14%)

Query: 4   EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRV 63
           EA+K++E VCVTGANGFIG+WLV+TL+++ YT+I+A++FPGSD+SHLF+LPGA  A++ V
Sbjct: 5   EADKKKEAVCVTGANGFIGSWLVRTLVEHGYTTIHASIFPGSDASHLFSLPGAAAADIVV 64

Query: 64  FEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV 123
           +EAD+LD+ AV+RAVEGC GVFHVASPC+LEDP DPEKEL++PAV+GT NVLEAA+RF  
Sbjct: 65  YEADLLDAEAVARAVEGCTGVFHVASPCSLEDPKDPEKELLMPAVEGTKNVLEAARRF-- 122

Query: 124 RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHG 183
                                                +KWYPVSKTLAEKAAWEFA KHG
Sbjct: 123 -------------------------------------QKWYPVSKTLAEKAAWEFAGKHG 145

Query: 184 VDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFE 243
           +DVVAIHPATCLG L+QP LNASCAVLQQLL+GS +TQEYHWLGAV VKDVAKAQVLLFE
Sbjct: 146 IDVVAIHPATCLGELLQPRLNASCAVLQQLLEGSTETQEYHWLGAVHVKDVAKAQVLLFE 205

Query: 244 SPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVH 277
           +PAASGRYLCT+GIYQF DFAERVSKLFPEFPVH
Sbjct: 206 TPAASGRYLCTDGIYQFADFAERVSKLFPEFPVH 239

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356555831|ref|XP_003546233.1| PREDICTED: bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase-like [Glycine max]

 Score =  373 bits (958), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 189/280 (67%), Positives = 230/280 (82%), Gaps = 7/280 (2%)

Query: 1   MASEAEKEEETVCVTGANGFIGTWLVKTLLD--NNYTSINATVFPGSDSSHLFALPGAGD 58
           MA+E    +E VCVTGANGFIG+WLV+TLL+  N   +I+AT+FPGSD+SHLF L  +  
Sbjct: 1   MANEI-PHDEVVCVTGANGFIGSWLVRTLLEKENPRYTIHATIFPGSDASHLFNLHPSAA 59

Query: 59  ANLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAA 118
           + L +F AD+LD+ A+SRA+  C GVFHVASPCTLEDP DP+++L+ PAVQGTLNVL AA
Sbjct: 60  SRLTLFPADLLDAAALSRAITACSGVFHVASPCTLEDPTDPQRDLLEPAVQGTLNVLTAA 119

Query: 119 KRFGVRRVVVTSSISAIVPNPGW-KGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWE 177
           +R GVRRVV+TSSISA+VPNPGW  G+  DE SWTD+EYCK R KWYPV+KT AE+AAW 
Sbjct: 120 RRVGVRRVVLTSSISAMVPNPGWPAGRAADEASWTDVEYCKGRGKWYPVAKTEAERAAWA 179

Query: 178 FAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKA 237
           F    GV+VVA+ PATCLGPL+QP LNAS AVL++L+ GS++TQEYHWLGAV VKDVAKA
Sbjct: 180 F---DGVEVVAVLPATCLGPLLQPDLNASSAVLRELMMGSRETQEYHWLGAVHVKDVAKA 236

Query: 238 QVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVH 277
            VLL+E+P A+GRYLCTNGIYQF  FA  VS+L+PEFP+H
Sbjct: 237 NVLLYETPTAAGRYLCTNGIYQFSSFAAMVSELYPEFPIH 276

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	278
TAIR|locus:2056171	318	AT2G02400 [Arabidopsis thalian	0.964	0.842	0.718	3.8e-110
TAIR|locus:2171258	324	AT5G58490 [Arabidopsis thalian	0.960	0.824	0.509	4.9e-69
TAIR|locus:2033904	325	AT1G51410 [Arabidopsis thalian	0.956	0.818	0.438	1.8e-55
TAIR|locus:2150315	326	AT5G19440 [Arabidopsis thalian	0.953	0.812	0.454	1.8e-55
TAIR|locus:2051018	321	CRL2 "CCR(Cinnamoyl coA:NADP o	0.917	0.794	0.456	4.8e-55
TAIR|locus:2051008	321	CRL1 "CCR(Cinnamoyl coA:NADP o	0.953	0.825	0.436	3.8e-53
TAIR|locus:2200427	344	CCR1 "cinnamoyl coa reductase	0.956	0.773	0.448	6.3e-53
TAIR|locus:2122093	326	DRL1 "dihydroflavonol 4-reduct	0.938	0.800	0.393	4.4e-52
TAIR|locus:2033394	319	AT1G66800 [Arabidopsis thalian	0.931	0.811	0.431	7.2e-52
TAIR|locus:2012280	325	AT1G09500 [Arabidopsis thalian	0.935	0.8	0.424	1.9e-51

TAIR|locus:2056171 AT2G02400 [Arabidopsis thaliana (taxid:3702)]

 Score = 1088 (388.1 bits), Expect = 3.8e-110, P = 3.8e-110
 Identities = 194/270 (71%), Positives = 238/270 (88%)

Query:     9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADV 68
             +ETVCVTGANGFIG+W+++TL++  YT I+A+++PGSD +HL  LPG+ D+ +++FEAD+
Sbjct:     3 KETVCVTGANGFIGSWIIRTLIEKGYTKIHASIYPGSDPTHLLQLPGS-DSKIKIFEADL 61

Query:    69 LDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVV 128
             LDS A+SRA++GC GVFHVASPCTL+ PVDPEKEL+ PAV+GT+NVLEAAKRF VRRVV+
Sbjct:    62 LDSDAISRAIDGCAGVFHVASPCTLDPPVDPEKELVEPAVKGTINVLEAAKRFNVRRVVI 121

Query:   129 TSSISAIVPNPGWKGKV-FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVV 187
             TSSISA+VPNP W  KV  DE+SW+DL++CKSR+KWYP+SKTLAEKAAWEF+EKHG ++V
Sbjct:   122 TSSISALVPNPNWPEKVPVDESSWSDLDFCKSRQKWYPISKTLAEKAAWEFSEKHGTNIV 181

Query:   188 AIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAA 247
              IHP+TCLGPL+QP LNASCAVL QLLQGS +TQE+HWLG V VKDVAK  V+LFE+P A
Sbjct:   182 TIHPSTCLGPLLQPNLNASCAVLLQLLQGSTETQEHHWLGVVHVKDVAKGHVMLFETPDA 241

Query:   248 SGRYLCTNGIYQFGDFAERVSKLFPEFPVH 277
             SGR+LCTNGIYQF +FA  VSKLFPEF VH
Sbjct:   242 SGRFLCTNGIYQFSEFAALVSKLFPEFAVH 271

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0016621 "cinnamoyl-CoA reductase activity" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

TAIR|locus:2171258 AT5G58490 [Arabidopsis thaliana (taxid:3702)]

 Score = 700 (251.5 bits), Expect = 4.9e-69, P = 4.9e-69
 Identities = 139/273 (50%), Positives = 187/273 (68%)

Query:     8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD---SSHLFALPGAGDANLRVF 64
             E E VCVTGA+G IG+WLV  LL   Y S++ATV    D   + HL  L GA    L +F
Sbjct:     5 EREVVCVTGASGCIGSWLVHQLLLRGY-SVHATVKNLQDEKETKHLEGLEGAA-TRLHLF 62

Query:    65 EADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR 124
             E D+L    VS A+ GC GVFH+ASPC +++  DP+K+L+ PAV+GT+NVL AAK   V+
Sbjct:    63 EMDLLQYDTVSAAINGCSGVFHLASPCIVDEVQDPQKQLLDPAVKGTINVLTAAKEASVK 122

Query:   125 RVVVTSSISAIVPNPGWKG-KVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHG 183
             RVVVTSSISAI P+P W   K+ +E  W   +YC+    WYP+SKTLAEKAAWEFAE+ G
Sbjct:   123 RVVVTSSISAITPSPNWPADKIKNEECWAAEDYCRQNGLWYPLSKTLAEKAAWEFAEEKG 182

Query:   184 VDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFE 243
             +DVV ++P T +GP++ P LNAS  +L +LLQG  +T E  ++G+V  KDVA A +L++E
Sbjct:   183 LDVVVVNPGTVMGPVIPPSLNASMHMLLRLLQGCTETYENFFMGSVHFKDVALAHILVYE 242

Query:   244 SPAASGRYLCTNGIYQFGDFAERVSKLFPEFPV 276
              P + GR+LC   I  +GDF  +V++L+P + V
Sbjct:   243 DPYSKGRHLCVEAISHYGDFVAKVAELYPNYNV 275

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0016621 "cinnamoyl-CoA reductase activity" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

TAIR|locus:2033904 AT1G51410 [Arabidopsis thaliana (taxid:3702)]

 Score = 572 (206.4 bits), Expect = 1.8e-55, P = 1.8e-55
 Identities = 121/276 (43%), Positives = 181/276 (65%)

Query:     5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD---SSHLFALPGAGDANL 61
             + +EE+TVCVTGA+G+I +W+VK LL   YT + A+V   +D   + HL AL GA +  L
Sbjct:     2 SSEEEKTVCVTGASGYIASWIVKLLLLRGYT-VKASVRDPNDPRKTEHLLALEGA-EERL 59

Query:    62 RVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAA-KR 120
             ++F+A++L+ G+   A++GC+GVFH ASP    D  DP+ EL+ PAV+GT+NVL +  K 
Sbjct:    60 KLFKANLLEEGSFDSAIDGCEGVFHTASPF-YHDVKDPQAELLDPAVKGTINVLSSCLKT 118

Query:   121 FGVRRVVVTSSISAIVPN--PGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEF 178
               V+RVV+TSSI+A+  N  P     + DET + D +YC++ K WY +SKTLAE AAW+F
Sbjct:   119 SSVKRVVLTSSIAAVAFNGMPRTPETIVDETWFADPDYCRASKLWYVLSKTLAENAAWKF 178

Query:   179 AEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQ 238
             A+++ + +V+I+PA  +GPL+QP LN S A +  L++G++ T      G V VKDVA A 
Sbjct:   179 AKENNLQLVSINPAMVIGPLLQPTLNTSAAAVLSLIKGAQ-TFPNATFGWVNVKDVANAH 237

Query:   239 VLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEF 274
             +  FE+P A GRY     +  + +    +  L+P+F
Sbjct:   238 IQAFENPDADGRYCLVERVAHYSEVVNILHDLYPDF 273

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS

GO:0048610 "cellular process involved in reproduction" evidence=RCA

GO:0048868 "pollen tube development" evidence=RCA

TAIR|locus:2150315 AT5G19440 [Arabidopsis thaliana (taxid:3702)]

 Score = 572 (206.4 bits), Expect = 1.8e-55, P = 1.8e-55
 Identities = 125/275 (45%), Positives = 174/275 (63%)

Query:     8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD---SSHLFALPGAGDANLRVF 64
             E + VCVTGA+G+I +WLVK LL   YT + A+V   SD   + HL +L GA +  L +F
Sbjct:     6 EGKVVCVTGASGYIASWLVKFLLSRGYT-VKASVRDPSDPKKTQHLVSLEGAKE-RLHLF 63

Query:    65 EADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEA-AKRFGV 123
             +AD+L+ G+   A++GC GVFH ASP    D  DP+ ELI PAV+GTLNVL + AK   V
Sbjct:    64 KADLLEQGSFDSAIDGCHGVFHTASPF-FNDAKDPQAELIDPAVKGTLNVLNSCAKASSV 122

Query:   124 RRVVVTSSISAIVPN--PGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK 181
             +RVVVTSS++A+  N  P       DET ++D E C++ K WY +SKTLAE AAW+ A++
Sbjct:   123 KRVVVTSSMAAVGYNGKPRTPDVTVDETWFSDPELCEASKMWYVLSKTLAEDAAWKLAKE 182

Query:   182 HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLL 241
              G+D+V I+PA  +GPL+QP LN S A +  L+ G+K      + G V VKDVA A +  
Sbjct:   183 KGLDIVTINPAMVIGPLLQPTLNTSAAAILNLINGAKTFPNLSF-GWVNVKDVANAHIQA 241

Query:   242 FESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPV 276
             FE P+A+GRY     +    +    + +L+P  P+
Sbjct:   242 FEVPSANGRYCLVERVVHHSEIVNILRELYPNLPL 276

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0046482 "para-aminobenzoic acid metabolic process" evidence=RCA

TAIR|locus:2051018 CRL2 "CCR(Cinnamoyl coA:NADP oxidoreductase)-like 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 568 (205.0 bits), Expect = 4.8e-55, P = 4.8e-55
 Identities = 122/267 (45%), Positives = 177/267 (66%)

Query:    12 VCVTGANGFIGTWLVKTLLDNNYTSINATVF-PGSDS-SHLFALPGAGDANLRVFEADVL 69
             VCVTGA GF+G+W+V  LL  +Y  ++ TV  PG++  +HL  L  AGD  L++F+AD+L
Sbjct:     9 VCVTGAGGFLGSWVVNHLLSRDYF-VHGTVRDPGNEKYAHLKKLDKAGD-KLKLFKADLL 66

Query:    70 DSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVT 129
             + G++  A+ GC GVFHVA P       +PE +LI PAV GTLNVL+A     V+RVV  
Sbjct:    67 NYGSLQSAIAGCSGVFHVACPVPSASVPNPEVDLIAPAVDGTLNVLKACVEAKVKRVVYV 126

Query:   130 SSISAIVPNPGW-KGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVA 188
             SS+SA+  NP W K +V DET+W+D +YCK  + WY +SKT AE  A+EFA++ G+D+V+
Sbjct:   127 SSVSAVAMNPMWSKSQVLDETAWSDQDYCKKTENWYSLSKTRAESEAFEFAKRTGLDLVS 186

Query:   189 IHPATCLGPLMQPY-LNASCAVLQQLL-QG--SKDTQEYHWLGAVPVKDVAKAQVLLFES 244
             + P   LGP++Q + +NAS  VL +LL +G  S++ QE H    V V+DVA+A +L++E 
Sbjct:   187 VCPTLVLGPVLQQHTVNASSLVLLKLLKEGYESRNNQERH---LVDVRDVAQALLLVYEK 243

Query:   245 PAASGRYLCTNGIYQFGDFAERVSKLF 271
               A GRY+C     +  + AE++  L+
Sbjct:   244 AEAEGRYICIGHTVREQEVAEKLKSLY 270

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0016621 "cinnamoyl-CoA reductase activity" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

TAIR|locus:2051008 CRL1 "CCR(Cinnamoyl coA:NADP oxidoreductase)-like 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
 Identities = 121/277 (43%), Positives = 175/277 (63%)

Query:     5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVF-PGSDS-SHLFALPGAGDANLR 62
             A+  +  VCVTGA GF+G+W+V  LL  +Y  ++ TV  P ++  +HL  L  AGD  L+
Sbjct:     2 ADVHKGKVCVTGAGGFLGSWVVDLLLSKDYF-VHGTVRDPDNEKYAHLKKLEKAGD-KLK 59

Query:    63 VFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG 122
             +F+AD+LD G++  A+ GC GVFHVA P       +PE ELI PAV GTLNVL+A     
Sbjct:    60 LFKADLLDYGSLQSAIAGCSGVFHVACPVPPASVPNPEVELIAPAVDGTLNVLKACIEAN 119

Query:   123 VRRVVVTSSISAIVPNPGW-KGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK 181
             V+RVV  SS++A   NP W K +V DE  W+D EYCK  + WY ++KT AE  A+EFA++
Sbjct:   120 VKRVVYVSSVAAAFMNPMWSKNQVLDEACWSDQEYCKKTENWYCLAKTRAESEAFEFAKR 179

Query:   182 HGVDVVAIHPATCLGPLMQPY-LNASCAVLQQLL-QG--SKDTQEYHWLGAVPVKDVAKA 237
              G+ +V++ P   LGP++Q   +NAS  VL +LL +G  ++D QE H    V V+DVA+A
Sbjct:   180 TGLHLVSVCPTLVLGPILQQNTVNASSLVLLKLLKEGFETRDNQERH---LVDVRDVAQA 236

Query:   238 QVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEF 274
              +L++E   A GRY+CT+   +     E++   +P +
Sbjct:   237 LLLVYEKAEAEGRYICTSHTVKEEIVVEKLKSFYPHY 273

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0016621 "cinnamoyl-CoA reductase activity" evidence=ISS

GO:0050662 "coenzyme binding" evidence=IEA

GO:0009408 "response to heat" evidence=IEP

GO:0009414 "response to water deprivation" evidence=IEP

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

GO:0046686 "response to cadmium ion" evidence=IEP

TAIR|locus:2200427 CCR1 "cinnamoyl coa reductase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
 Identities = 125/279 (44%), Positives = 174/279 (62%)

Query:     1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD--SSHLFALPGAGD 58
             +AS A K   TVCVTGA G+I +W+VK LL+  YT +  TV    D  ++HL  L G G 
Sbjct:     5 VASPAGK---TVCVTGAGGYIASWIVKILLERGYT-VKGTVRNPDDPKNTHLRELEG-GK 59

Query:    59 ANLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAA 118
               L + +AD+ D  A+  A++GC GVFH ASP T  D  DPE +++ PAV G   V+ AA
Sbjct:    60 ERLILCKADLQDYEALKAAIDGCDGVFHTASPVT--D--DPE-QMVEPAVNGAKFVINAA 114

Query:   119 KRFGVRRVVVTSSISAIVPNPGWKGK-VFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWE 177
                 V+RVV+TSSI A+  +P    + V DE+ W+DL++CK+ K WY   K +AE+AAWE
Sbjct:   115 AEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWE 174

Query:   178 FAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKA 237
              A++ GVD+V ++P   LGP +QP +NAS   + + L GS  T        V V+DVA A
Sbjct:   175 TAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALA 234

Query:   238 QVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPV 276
              VL++E+P+ASGRYL        G+  E ++KLFPE+P+
Sbjct:   235 HVLVYEAPSASGRYLLAESARHRGEVVEILAKLFPEYPL 273

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0050662 "coenzyme binding" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=IDA

GO:0016621 "cinnamoyl-CoA reductase activity" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0006623 "protein targeting to vacuole" evidence=RCA

GO:0007623 "circadian rhythm" evidence=IEP

GO:0009409 "response to cold" evidence=IEP

TAIR|locus:2122093 DRL1 "dihydroflavonol 4-reductase-like1" [Arabidopsis thaliana (taxid:3702)]

 Score = 540 (195.1 bits), Expect = 4.4e-52, P = 4.4e-52
 Identities = 107/272 (39%), Positives = 177/272 (65%)

Query:    12 VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS--SHLFALPGAGDANLRVFEADVL 69
             VCVTGA+GF+ +WLVK LL   Y  I     PG++   +HL+ L GA +  LR+ +AD++
Sbjct:     8 VCVTGASGFLASWLVKRLLLEGYEVIGTVRDPGNEKKLAHLWKLEGAKE-RLRLVKADLM 66

Query:    70 DSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-GVRRVVV 128
             + G+   A+ GC+GVFH ASP  L+   +PE+E++ PA++GTLNVL + ++   ++RVV+
Sbjct:    67 EEGSFDNAIMGCQGVFHTASP-VLKPTSNPEEEILRPAIEGTLNVLRSCRKNPSLKRVVL 125

Query:   129 TSSISAIVPNPGWKGKV-FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVV 187
             TSS S +     +  K+  DE+ WT +E CK  + WY +SKTLAE+AAW+F+E++G+D+V
Sbjct:   126 TSSSSTVRIRDDFDPKIPLDESIWTSVELCKRFQVWYALSKTLAEQAAWKFSEENGIDLV 185

Query:   188 AIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW---LGAVPVKDVAKAQVLLFES 244
              + P+  +GP + P L ++ + +  LL+G  +T+++ W   +G V + DVA+  +++FE 
Sbjct:   186 TVLPSFLVGPSLPPDLCSTASDVLGLLKG--ETEKFQWHGQMGYVHIDDVARTHIVVFEH 243

Query:   245 PAASGRYLCTNGIYQFGDFAERVSKLFPEFPV 276
              AA GRY+C++ +    +    +S  +P  P+
Sbjct:   244 EAAQGRYICSSNVISLEELVSFLSARYPSLPI 275

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0009555 "pollen development" evidence=IMP

GO:0048316 "seed development" evidence=IMP

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0010584 "pollen exine formation" evidence=IMP

GO:0080110 "sporopollenin biosynthetic process" evidence=IMP

TAIR|locus:2033394 AT1G66800 [Arabidopsis thaliana (taxid:3702)]

 Score = 538 (194.4 bits), Expect = 7.2e-52, P = 7.2e-52
 Identities = 117/271 (43%), Positives = 172/271 (63%)

Query:     8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS---SHLFALPGAGDANLRVF 64
             E + VCVTGA+G+I +W+VK LL   YT + ATV    D+   +HL  L GA +  L++F
Sbjct:     4 EGKVVCVTGASGYIASWIVKLLLLRGYT-VRATVRNPMDTKKTNHLLTLEGASE-RLKLF 61

Query:    65 EADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEA-AKRFGV 123
             ++D+L+ G+  +A+EGC GVFH ASP +L    DP+ E+I PAV GTLNVL   AK   V
Sbjct:    62 KSDLLEEGSFDQAIEGCDGVFHTASPVSLT-VTDPQTEMIDPAVNGTLNVLRTCAKVSSV 120

Query:   124 RRVVVTSSISAIVP-NPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH 182
             +RV+VTSS +A +  NP     V DET +TDL    + K WY  SKTLAE+ AW FA+++
Sbjct:   121 KRVIVTSSTAATLSINPN---DVVDETVFTDLSVYLAMKAWYGYSKTLAEETAWRFAKEN 177

Query:   183 GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLF 242
             G+D+V ++P   +GP++QP LN S  V+  L+ G   +  +++   + V+DV+ A +  F
Sbjct:   178 GIDLVVMNPGNVIGPVLQPTLNYSVEVIVDLINGKNPSNSFYYR-FMDVRDVSLAHIKAF 236

Query:   243 ESPAASGRYLCTNGIYQFGDFAERVSKLFPE 273
             E P+ASGRY+  +      D  + + +LFP+
Sbjct:   237 EVPSASGRYILADPDVTMKDIQKLLHELFPD 267

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=ISS

GO:0050662 "coenzyme binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS

TAIR|locus:2012280 AT1G09500 [Arabidopsis thaliana (taxid:3702)]

 Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
 Identities = 115/271 (42%), Positives = 169/271 (62%)

Query:    10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD---SSHLFALPGAGDANLRVFEA 66
             + VCVTGA+G+I +W+VK LL   YT INATV    D   + HL AL GA +  L++F+A
Sbjct:     6 KVVCVTGASGYIASWIVKLLLFRGYT-INATVRDPKDRKKTDHLLALDGAKE-RLKLFKA 63

Query:    67 DVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRR 125
             D+LD G+   A++GC+ VFH ASP  +    DP+ ELI PAV GT+NVL    +   V+R
Sbjct:    64 DLLDEGSFELAIDGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKR 123

Query:   126 VVVTSSISAIVPNPGWK---GKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH 182
             V++TSS++A++  P  K     V DET +T+  + + RK+WY +SKTLAE AAW FA+ +
Sbjct:   124 VILTSSMAAVLA-PETKLGPNDVVDETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDN 182

Query:   183 GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLF 242
              +D++ ++P    GP++QP LN S AV+ +L++G       H    V V+DVA A V   
Sbjct:   183 EIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPFNTTHHR-FVDVRDVALAHVKAL 241

Query:   243 ESPAASGRYLCTNGIYQFGDFAERVSKLFPE 273
             E+P+A+GRY+    +    D    + + FP+
Sbjct:   242 ETPSANGRYIIDGPVVTIKDIENVLREFFPD 272

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=ISS

GO:0050662 "coenzyme binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00035376001 SubName- Full=Chromosome undetermined scaffold_77, whole genome shotgun sequence; (333 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	278
cd08958	293	cd08958, FR_SDR_e, flavonoid reductase (FR), exten	1e-128
PLN02662	322	PLN02662, PLN02662, cinnamyl-alcohol dehydrogenase	9e-84
cd05227	301	cd05227, AR_SDR_e, aldehyde reductase, extended (e	2e-73
PLN02989	325	PLN02989, PLN02989, cinnamyl-alcohol dehydrogenase	9e-66
PLN02214	342	PLN02214, PLN02214, cinnamoyl-CoA reductase	1e-65
PLN02986	322	PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase	2e-65
PLN02650	351	PLN02650, PLN02650, dihydroflavonol-4-reductase	4e-63
cd05193	295	cd05193, AR_like_SDR_e, aldehyde reductase, flavon	5e-59
PLN00198	338	PLN00198, PLN00198, anthocyanidin reductase; Provi	2e-55
PLN02896	353	PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase	8e-51
PLN02583	297	PLN02583, PLN02583, cinnamoyl-CoA reductase	9e-47
cd05228	318	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr	3e-38
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	3e-36
PLN02686	367	PLN02686, PLN02686, cinnamoyl-CoA reductase	1e-33
TIGR03466	328	TIGR03466, HpnA, hopanoid-associated sugar epimera	2e-30
cd05257	316	cd05257, Arna_like_SDR_e, Arna decarboxylase_like,	3e-27
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	4e-24
cd05241	331	cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d	3e-21
cd08946	200	cd08946, SDR_e, extended (e) SDRs	4e-20
cd05256	304	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e	2e-19
TIGR04180	297	TIGR04180, EDH_00030, NAD dependent epimerase/dehy	4e-18
cd05263	293	cd05263, MupV_like_SDR_e, Pseudomonas fluorescens	8e-18
cd05232	303	cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase,	1e-17
pfam01073	280	pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr	4e-17
cd09811	354	cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD	3e-16
cd09813	335	cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD	5e-14
cd05230	305	cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase	2e-12
cd05243	203	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	2e-12
cd05234	305	cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase,	7e-12
cd05251	242	cd05251, NmrA_like_SDR_a, NmrA (a transcriptional	1e-11
pfam13460	182	pfam13460, NAD_binding_10, NADH(P)-binding	2e-11
cd05264	300	cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase	2e-11
COG1086	588	COG1086, COG1086, Predicted nucleoside-diphosphate	6e-11
cd05258	337	cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, e	1e-09
pfam02719	280	pfam02719, Polysacc_synt_2, Polysaccharide biosynt	1e-09
cd05244	207	cd05244, BVR-B_like_SDR_a, biliverdin IX beta redu	1e-08
cd05237	287	cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-l	3e-08
cd05269	272	cd05269, TMR_SDR_a, triphenylmethane reductase (TM	4e-08
cd05238	305	cd05238, Gne_like_SDR_e, Escherichia coli Gne (a n	9e-08
cd05247	323	cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase,	1e-07
cd05240	306	cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase	2e-07
COG1087	329	COG1087, GalE, UDP-glucose 4-epimerase [Cell envel	2e-07
cd05252	336	cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydrata	3e-07
cd05271	273	cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub	3e-07
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	4e-07
TIGR01179	328	TIGR01179, galE, UDP-glucose-4-epimerase GalE	5e-07
pfam08659	181	pfam08659, KR, KR domain	1e-06
cd08957	307	cd08957, WbmH_like_SDR_e, Bordetella bronchiseptic	1e-06
cd05229	302	cd05229, SDR_a3, atypical (a) SDRs, subgroup 3	1e-06
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	1e-06
TIGR04130	337	TIGR04130, FnlA, UDP-N-acetylglucosamine 4,6-dehyd	2e-06
cd05239	300	cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, exte	3e-06
cd05273	328	cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-	4e-06
cd05245	293	cd05245, SDR_a2, atypical (a) SDRs, subgroup 2	6e-06
cd05231	259	cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcript	9e-06
COG1089	345	COG1089, Gmd, GDP-D-mannose dehydratase [Cell enve	1e-05
PLN02657	390	PLN02657, PLN02657, 3,8-divinyl protochlorophyllid	2e-05
cd05272	308	cd05272, TDH_SDR_e, L-threonine dehydrogenase, ext	2e-05
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	2e-05
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	2e-05
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-05
cd09812	339	cd09812, 3b-HSD_like_1_SDR_e, 3beta-hydroxysteroid	2e-05
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	3e-05
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	3e-05
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	4e-05
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	4e-05
TIGR03589	324	TIGR03589, PseB, UDP-N-acetylglucosamine 4,6-dehyd	1e-04
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	1e-04
pfam07993	245	pfam07993, NAD_binding_4, Male sterility protein	1e-04
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	1e-04
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	2e-04
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	2e-04
cd05246	315	cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydra	2e-04
cd05260	316	cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase	3e-04
TIGR02622	349	TIGR02622, CDP_4_6_dhtase, CDP-glucose 4,6-dehydra	3e-04
PRK05865	854	PRK05865, PRK05865, hypothetical protein; Provisio	4e-04
COG3320	382	COG3320, COG3320, Putative dehydrogenase domain of	4e-04
PLN02166	436	PLN02166, PLN02166, dTDP-glucose 4,6-dehydratase	4e-04
cd05253	332	cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimera	7e-04
PLN02206	442	PLN02206, PLN02206, UDP-glucuronate decarboxylase	7e-04
cd05233	234	cd05233, SDR_c, classical (c) SDRs	8e-04
cd08947	224	cd08947, NmrA_TMR_like_SDR_a, NmrA (a transcriptio	0.001
PLN02240	352	PLN02240, PLN02240, UDP-glucose 4-epimerase	0.001
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	0.002
cd05262	291	cd05262, SDR_a7, atypical (a) SDRs, subgroup 7	0.002
TIGR01746	367	TIGR01746, Thioester-redct, thioester reductase do	0.002
PLN02695	370	PLN02695, PLN02695, GDP-D-mannose-3',5'-epimerase	0.003

>gnl|CDD|187661 cd08958, FR_SDR_e, flavonoid reductase (FR), extended (e) SDRs

 Score =  364 bits (938), Expect = e-128
 Identities = 134/272 (49%), Positives = 190/272 (69%), Gaps = 8/272 (2%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS---SHLFALPGAGDANLRVFEADV 68
           VCVTGA+GFIG+WLVK LL   YT + ATV    D    +HL  L GA +  L++F+AD+
Sbjct: 1   VCVTGASGFIGSWLVKRLLQRGYT-VRATVRDPGDEKKVAHLLELEGAKE-RLKLFKADL 58

Query: 69  LDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRRVV 127
           LD G+   A++GC GVFHVASP    D  DPE+E+I PAV+GTLNVLEA  +   V+RVV
Sbjct: 59  LDYGSFDAAIDGCDGVFHVASPVDF-DSEDPEEEMIEPAVKGTLNVLEACAKAKSVKRVV 117

Query: 128 VTSSISAIVPNPGWK-GKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDV 186
            TSS++A+V NP    GKV DE+ W+DL++CK  K WY +SKTLAEKAAWEFAE++G+D+
Sbjct: 118 FTSSVAAVVWNPNRGEGKVVDESCWSDLDFCKKTKLWYALSKTLAEKAAWEFAEENGLDL 177

Query: 187 VAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA 246
           V ++P+  +GP +QP LN+S  ++  LL+G+ +  +   L  V V DVA A +LL+E P+
Sbjct: 178 VTVNPSLVVGPFLQPSLNSSSQLILSLLKGNAEMYQNGSLALVHVDDVADAHILLYEKPS 237

Query: 247 ASGRYLCTNGIYQFGDFAERVSKLFPEFPVHS 278
           ASGRY+C++ +    + A  ++K +P++ + +
Sbjct: 238 ASGRYICSSHVVTRPELAALLAKKYPQYNIPT 269

This subgroup contains FRs of the extended SDR-type and related proteins. These FRs act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites; they have the characteristic active site triad of the SDRs (though not the upstream active site Asn) and a NADP-binding motif that is very similar to the typical extended SDR motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|178268 PLN02662, PLN02662, cinnamyl-alcohol dehydrogenase family protein

 Score =  253 bits (649), Expect = 9e-84
 Identities = 123/275 (44%), Positives = 176/275 (64%), Gaps = 10/275 (3%)

Query: 8   EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD---SSHLFALPGAGDANLRVF 64
           E + VCVTGA+G+I +WLVK LL   YT + ATV   +D   + HL AL GA +  L +F
Sbjct: 3   EGKVVCVTGASGYIASWLVKLLLQRGYT-VKATVRDPNDPKKTEHLLALDGAKE-RLHLF 60

Query: 65  EADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEA-AKRFGV 123
           +A++L+ G+    V+GC+GVFH ASP    D  DP+ ELI PAV+GTLNVL + AK   V
Sbjct: 61  KANLLEEGSFDSVVDGCEGVFHTASP-FYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSV 119

Query: 124 RRVVVTSSISAIVPN--PGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK 181
           +RVVVTSS++A+  N  P     V DET ++D  +C+  K WY +SKTLAE+AAW+FA++
Sbjct: 120 KRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKE 179

Query: 182 HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLL 241
           +G+D+V I+PA  +GPL+QP LN S   +  L+ G++ T        V V+DVA A +  
Sbjct: 180 NGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQ-TFPNASYRWVDVRDVANAHIQA 238

Query: 242 FESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPV 276
           FE P+ASGRY     +  + +  + + +L+P   +
Sbjct: 239 FEIPSASGRYCLVERVVHYSEVVKILHELYPTLQL 273

Length = 322

>gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs

 Score =  226 bits (578), Expect = 2e-73
 Identities = 111/277 (40%), Positives = 149/277 (53%), Gaps = 17/277 (6%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS---HLFALPGAGDANLRVFEAD 67
            V VTGA GFI + +V+ LL   Y  +  TV   S S+    L    G  D  L     D
Sbjct: 1   LVLVTGATGFIASHIVEQLLKAGY-KVRGTVRSLSKSAKLKALLKAAGYND-RLEFVIVD 58

Query: 68  -VLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRR 125
            +    A   A++G   V HVASP     P D E ++I PAV+GTLNVLEAAK  G V+R
Sbjct: 59  DLTAPNAWDEALKGVDYVIHVASPFPFTGP-DAEDDVIDPAVEGTLNVLEAAKAAGSVKR 117

Query: 126 VVVTSSISAIV-PNPGWKGKVFDETSWTDLEYCKSRKKW-YPVSKTLAEKAAWEFAE--K 181
           VV+TSS++A+  P     GKVF E  W DL   KS     Y  SKTLAEKAAWEF +  K
Sbjct: 118 VVLTSSVAAVGDPTAEDPGKVFTEEDWNDLTISKSNGLDAYIASKTLAEKAAWEFVKENK 177

Query: 182 HGVDVVAIHPATCLGPLMQP-YLNASCAVLQQLLQGSKDT--QEYHWLGAVPVKDVAKAQ 238
              +++ I+P   LGP +    LN+S  ++ +LL G          + G V V+DVA A 
Sbjct: 178 PKFELITINPGYVLGPSLLADELNSSNELINKLLDGKLPAIPPNLPF-GYVDVRDVADAH 236

Query: 239 VLLFESPAASG-RYLCTNGIYQFGDFAERVSKLFPEF 274
           V   ESP A+G R++ + G + F + A+ + + FP+ 
Sbjct: 237 VRALESPEAAGQRFIVSAGPFSFQEIADLLREEFPQL 273

This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301

>gnl|CDD|178569 PLN02989, PLN02989, cinnamyl-alcohol dehydrogenase family protein

 Score =  207 bits (529), Expect = 9e-66
 Identities = 113/271 (41%), Positives = 168/271 (61%), Gaps = 9/271 (3%)

Query: 10  ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD---SSHLFALPGAGDANLRVFEA 66
           + VCVTGA+G+I +W+VK LL   Y +INATV    D   + HL AL GA +  L++F+A
Sbjct: 6   KVVCVTGASGYIASWIVKLLLFRGY-TINATVRDPKDRKKTDHLLALDGAKE-RLKLFKA 63

Query: 67  DVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRR 125
           D+LD G+   A++GC+ VFH ASP  +    DP+ ELI PAV GT+NVL    +   V+R
Sbjct: 64  DLLDEGSFELAIDGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKR 123

Query: 126 VVVTSSISAIVPNPGWKG--KVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHG 183
           V++TSS++A++      G   V DET +T+  + + RK+WY +SKTLAE AAW FA+ + 
Sbjct: 124 VILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDNE 183

Query: 184 VDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFE 243
           +D++ ++P    GP++QP LN S AV+ +L++G       H    V V+DVA A V   E
Sbjct: 184 IDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPFNTTHHR-FVDVRDVALAHVKALE 242

Query: 244 SPAASGRYLCTNGIYQFGDFAERVSKLFPEF 274
           +P+A+GRY+    +    D    + + FP+ 
Sbjct: 243 TPSANGRYIIDGPVVTIKDIENVLREFFPDL 273

Length = 325

>gnl|CDD|177862 PLN02214, PLN02214, cinnamoyl-CoA reductase

 Score =  208 bits (529), Expect = 1e-65
 Identities = 119/270 (44%), Positives = 170/270 (62%), Gaps = 10/270 (3%)

Query: 10  ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD--SSHLFALPGAGDANLRVFEAD 67
           +TVCVTGA G+I +W+VK LL+  YT +  TV    D  ++HL  L G G   L + +AD
Sbjct: 11  KTVCVTGAGGYIASWIVKILLERGYT-VKGTVRNPDDPKNTHLRELEG-GKERLILCKAD 68

Query: 68  VLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVV 127
           + D  A+  A++GC GVFH ASP T +DP    ++++ PAV G   V+ AA    V+RVV
Sbjct: 69  LQDYEALKAAIDGCDGVFHTASPVT-DDP----EQMVEPAVNGAKFVINAAAEAKVKRVV 123

Query: 128 VTSSISAIVPNPGWKGK-VFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDV 186
           +TSSI A+  +P    + V DE+ W+DL++CK+ K WY   K +AE+AAWE A++ GVD+
Sbjct: 124 ITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEKGVDL 183

Query: 187 VAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA 246
           V ++P   LGP +QP +NAS   + + L GS  T        V V+DVA A VL++E+P+
Sbjct: 184 VVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALAHVLVYEAPS 243

Query: 247 ASGRYLCTNGIYQFGDFAERVSKLFPEFPV 276
           ASGRYL        G+  E ++KLFPE+P+
Sbjct: 244 ASGRYLLAESARHRGEVVEILAKLFPEYPL 273

Length = 342

>gnl|CDD|178567 PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase family protein

 Score =  207 bits (527), Expect = 2e-65
 Identities = 113/271 (41%), Positives = 166/271 (61%), Gaps = 10/271 (3%)

Query: 10  ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD---SSHLFALPGAGDANLRVFEA 66
           + VCVTGA+G+I +W+VK LL   YT + ATV   +D   + HL AL GA +  L++F+A
Sbjct: 6   KLVCVTGASGYIASWIVKLLLLRGYT-VKATVRDLTDRKKTEHLLALDGAKE-RLKLFKA 63

Query: 67  DVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-GVRR 125
           D+L+  +  +A+EGC  VFH ASP       DP+ ELI PA++GT+NVL   K    V+R
Sbjct: 64  DLLEESSFEQAIEGCDAVFHTASP-VFFTVKDPQTELIDPALKGTINVLNTCKETPSVKR 122

Query: 126 VVVTSSISAIVPN--PGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHG 183
           V++TSS +A++    P     V DET ++D   C+  K WYP+SK LAE AAWEFA+ +G
Sbjct: 123 VILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKDNG 182

Query: 184 VDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFE 243
           +D+V ++P    GPL+QP LN S  ++   + G K+     +   V V+DVA A +   E
Sbjct: 183 IDMVVLNPGFICGPLLQPTLNFSVELIVDFING-KNLFNNRFYRFVDVRDVALAHIKALE 241

Query: 244 SPAASGRYLCTNGIYQFGDFAERVSKLFPEF 274
           +P+A+GRY+    I    D  + + +LFP+ 
Sbjct: 242 TPSANGRYIIDGPIMSVNDIIDILRELFPDL 272

Length = 322

>gnl|CDD|178256 PLN02650, PLN02650, dihydroflavonol-4-reductase

 Score =  201 bits (514), Expect = 4e-63
 Identities = 112/281 (39%), Positives = 166/281 (59%), Gaps = 20/281 (7%)

Query: 8   EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVF-PGS--DSSHLFALPGAGDANLRVF 64
           ++ETVCVTGA+GFIG+WLV  LL+  YT + ATV  P +     HL  LPGA    L ++
Sbjct: 4   QKETVCVTGASGFIGSWLVMRLLERGYT-VRATVRDPANVKKVKHLLDLPGA-TTRLTLW 61

Query: 65  EADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-V 123
           +AD+   G+   A+ GC GVFHVA+P   E   DPE E+I P V G L++++A  +   V
Sbjct: 62  KADLAVEGSFDDAIRGCTGVFHVATPMDFE-SKDPENEVIKPTVNGMLSIMKACAKAKTV 120

Query: 124 RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK--W-YPVSKTLAEKAAWEFAE 180
           RR+V TSS +  V     +  V+DE  W+DL++C+ +K   W Y VSKTLAEKAAW++A 
Sbjct: 121 RRIVFTSS-AGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAA 179

Query: 181 KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW-----LGAVPVKDVA 235
           ++G+D ++I P   +GP +   +  S      L+ G+    E H+        V + D+ 
Sbjct: 180 ENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGN----EAHYSIIKQGQFVHLDDLC 235

Query: 236 KAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPV 276
            A + LFE PAA GRY+C++      D A+ + + +PE+ +
Sbjct: 236 NAHIFLFEHPAAEGRYICSSHDATIHDLAKMLREKYPEYNI 276

Length = 351

>gnl|CDD|187536 cd05193, AR_like_SDR_e, aldehyde reductase, flavonoid reductase, and related proteins, extended (e) SDRs

 Score =  189 bits (482), Expect = 5e-59
 Identities = 98/282 (34%), Positives = 146/282 (51%), Gaps = 26/282 (9%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD---SSHLFALPGAGDANLRVFEADV 68
           V VTGA+GF+ + +V+ LL+  Y  + ATV   S     +HL  L  A    L +  AD+
Sbjct: 1   VLVTGASGFVASHVVEQLLERGYK-VRATVRDPSKVKKVNHLLDLD-AKPGRLELAVADL 58

Query: 69  LDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRRVV 127
            D  +    ++GC GVFHVA+P +     DP  E+I PA+ GTLN L+AA     V+R V
Sbjct: 59  TDEQSFDEVIKGCAGVFHVATPVSFSSK-DPN-EVIKPAIGGTLNALKAAAAAKSVKRFV 116

Query: 128 VTSSISAI-VPNPGWKGKVFDETSWTDLEYCKSRKK--W-YPVSKTLAEKAAWEFAEKHG 183
           +TSS  ++ +P P  +G V DE SW   E+    KK  W Y  SKTLAEKAAW+FA+++ 
Sbjct: 117 LTSSAGSVLIPKPNVEGIVLDEKSWNLEEFDSDPKKSAWVYAASKTLAEKAAWKFADENN 176

Query: 184 VDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSK---------DTQEYHWLGAVPVKDV 234
           +D++ + P   +G +      +S      L+ G++             Y     V V D+
Sbjct: 177 IDLITVIPTLTIGTIFDSETPSSSGWAMSLITGNEGVSPALALIPPGYY-----VHVVDI 231

Query: 235 AKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPV 276
             A +   E P A GRY+CT G + +    + + K +P +  
Sbjct: 232 CLAHIGCLELPIARGRYICTAGNFDWNTLLKTLRKKYPSYTF 273

This subgroup contains aldehyde reductase and flavonoid reductase of the extended SDR-type and related proteins. Proteins in this subgroup have a complete SDR-type active site tetrad and a close match to the canonical extended SDR NADP-binding motif. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 295

>gnl|CDD|215100 PLN00198, PLN00198, anthocyanidin reductase; Provisional

 Score =  182 bits (462), Expect = 2e-55
 Identities = 106/298 (35%), Positives = 162/298 (54%), Gaps = 28/298 (9%)

Query: 1   MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS---SHLFALPGAG 57
           MA+     ++T CV G  GF+ + L+K LL   Y ++N TV    +    +HL AL   G
Sbjct: 1   MATLTPTGKKTACVIGGTGFLASLLIKLLLQKGY-AVNTTVRDPENQKKIAHLRALQELG 59

Query: 58  DANLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEA 117
           D  L++F AD+ D  +    + GC  VFHVA+P       DPE ++I PA+QG  NVL+A
Sbjct: 60  D--LKIFGADLTDEESFEAPIAGCDLVFHVATPVNFASE-DPENDMIKPAIQGVHNVLKA 116

Query: 118 -AKRFGVRRVVVTSSISAI-VPNPGWKGKVFDETSWTDLEYCKSRK--KW-YPVSKTLAE 172
            AK   V+RV++TSS +A+ +      G V +E +WTD+E+  S K   W YP SKTLAE
Sbjct: 117 CAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPPTWGYPASKTLAE 176

Query: 173 KAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA---- 228
           KAAW+FAE++ +D++ + P    GP +   + +S ++   L+ G     E+   G     
Sbjct: 177 KAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITG----NEFLINGLKGMQ 232

Query: 229 --------VPVKDVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHS 278
                     V+DV +A + L E  +ASGRY+C        + A+ + K +P++ V +
Sbjct: 233 MLSGSISITHVEDVCRAHIFLAEKESASGRYICCAANTSVPELAKFLIKRYPQYQVPT 290

Length = 338

>gnl|CDD|178484 PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase

 Score =  170 bits (431), Expect = 8e-51
 Identities = 105/294 (35%), Positives = 160/294 (54%), Gaps = 29/294 (9%)

Query: 3   SEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLR 62
              E    T CVTGA G+IG+WLVK LL   YT ++AT+   + S HL +    GD  LR
Sbjct: 4   EGRESATGTYCVTGATGYIGSWLVKLLLQRGYT-VHATLRDPAKSLHLLSKWKEGD-RLR 61

Query: 63  VFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPE-------KELILPAVQGTLNVL 115
           +F AD+ + G+   AV+GC GVFHVA+    +   D          ++I PA++GTLNVL
Sbjct: 62  LFRADLQEEGSFDEAVKGCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVL 121

Query: 116 EAAKRFG-VRRVVVTSSISAIVP---NPGWKGKVFDETSWTDLEYCKSRKK--W-YPVSK 168
           ++  +   V+RVV TSSIS +     N  W+  V DET  T +++  + K   W Y +SK
Sbjct: 122 KSCLKSKTVKRVVFTSSISTLTAKDSNGRWR-AVVDETCQTPIDHVWNTKASGWVYVLSK 180

Query: 169 TLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA 228
            L E+AA+++A+++G+D+V++   T  GP + P + +S  VL   + G  D++ +  L A
Sbjct: 181 LLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITG--DSKLFSILSA 238

Query: 229 VP----------VKDVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFP 272
           V           ++D+  A + L E   A GRY+C    Y   +    +SK +P
Sbjct: 239 VNSRMGSIALVHIEDICDAHIFLMEQTKAEGRYICCVDSYDMSELINHLSKEYP 292

Length = 353

>gnl|CDD|178195 PLN02583, PLN02583, cinnamoyl-CoA reductase

 Score =  157 bits (400), Expect = 9e-47
 Identities = 89/267 (33%), Positives = 138/267 (51%), Gaps = 36/267 (13%)

Query: 6   EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDAN--LRV 63
           ++  ++VCV  A+G++G WLVK LL   YT ++A V    ++     + G       L+V
Sbjct: 3   DESSKSVCVMDASGYVGFWLVKRLLSRGYT-VHAAVQKNGETEIEKEIRGLSCEEERLKV 61

Query: 64  FEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVD--PEKELILPA-VQGTLNVLEA-AK 119
           F+ D LD  ++  A++GC G+F     C  + P D     E ++   V+   NVLEA A+
Sbjct: 62  FDVDPLDYHSILDALKGCSGLF-----CCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQ 116

Query: 120 RFGVRRVVVTSSISAIVPNPGWKG------KVFDETSWTDLEYCKSRKKWYPVSKTLAEK 173
              + +VV TSS++A++    W+       K  DE SW+D  +C+  K W+ ++KTL+EK
Sbjct: 117 TDTIEKVVFTSSLTAVI----WRDDNISTQKDVDERSWSDQNFCRKFKLWHALAKTLSEK 172

Query: 174 AAWEFAEKHGVDVVAIHPATCLGP-LMQ--PYLNASCAVLQQLLQGSKDTQEYHWLGAVP 230
            AW  A   GV++V+I+    +GP L Q  PY           L+G+    E   L  V 
Sbjct: 173 TAWALAMDRGVNMVSINAGLLMGPSLTQHNPY-----------LKGAAQMYENGVLVTVD 221

Query: 231 VKDVAKAQVLLFESPAASGRYLCTNGI 257
           V  +  A +  FE  ++ GRYLC N I
Sbjct: 222 VNFLVDAHIRAFEDVSSYGRYLCFNHI 248

Length = 297

>gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs

 Score =  136 bits (344), Expect = 3e-38
 Identities = 86/245 (35%), Positives = 118/245 (48%), Gaps = 29/245 (11%)

Query: 14  VTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGA 73
           VTGA GF+G+ LV+ LL   Y  + A V  GSD+  L  LP      + V E D+ D+ +
Sbjct: 3   VTGATGFLGSNLVRALLAQGYR-VRALVRSGSDAVLLDGLP------VEVVEGDLTDAAS 55

Query: 74  VSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSIS 133
           ++ A++GC  VFH+A+  +L    D  KEL    V+GT NVL+AA   GVRRVV TSSI+
Sbjct: 56  LAAAMKGCDRVFHLAAFTSLWAK-DR-KELYRTNVEGTRNVLDAALEAGVRRVVHTSSIA 113

Query: 134 AIVPNPGWKGKVFDETS-WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPA 192
           A+   P       DET+ W +  +       Y  SK LAE    E A + G+DVV ++P+
Sbjct: 114 ALGGPP---DGRIDETTPWNERPFPND----YYRSKLLAELEVLEAAAE-GLDVVIVNPS 165

Query: 193 TCLGPLMQPYLNAS-----CAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAA 247
              GP        S        L   L              V V+DVA+  +   E    
Sbjct: 166 AVFGPG--DEGPTSTGLDVLDYLNGKLPAYPPG----GTSFVDVRDVAEGHIAAMEKGRR 219

Query: 248 SGRYL 252
             RY+
Sbjct: 220 GERYI 224

This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score =  130 bits (329), Expect = 3e-36
 Identities = 73/274 (26%), Positives = 106/274 (38%), Gaps = 26/274 (9%)

Query: 14  VTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGA 73
           VTG  GFIG+ LV+ LL   +         G D       P    + +     D+ D   
Sbjct: 5   VTGGAGFIGSHLVERLLAAGHDVR------GLDRLRDGLDPL--LSGVEFVVLDLTDRDL 56

Query: 74  VSRAVEGCK-GVFHVASPCTLEDPVDPEKELIL-PAVQGTLNVLEAAKRFGVRRVVVTSS 131
           V    +G    V H+A+  ++ D    +    L   V GTLN+LEAA+  GV+R V  SS
Sbjct: 57  VDELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASS 116

Query: 132 ISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHP 191
           +S +  +P       DE               Y VSK  AE+    +A  +G+ VV + P
Sbjct: 117 VSVVYGDP--PPLPIDEDLGPPRPL-----NPYGVSKLAAEQLLRAYARLYGLPVVILRP 169

Query: 192 ATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP-------VKDVAKAQVLLFES 244
               GP  +P L +S  V   + Q  K        G          V DVA A +L  E+
Sbjct: 170 FNVYGPGDKPDL-SSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALEN 228

Query: 245 PAASGRYLCTNGI-YQFGDFAERVSKLFPEFPVH 277
           P      + +        + AE V++        
Sbjct: 229 PDGGVFNIGSGTAEITVRELAEAVAEAVGSKAPL 262

Length = 314

>gnl|CDD|215370 PLN02686, PLN02686, cinnamoyl-CoA reductase

 Score =  125 bits (315), Expect = 1e-33
 Identities = 85/291 (29%), Positives = 132/291 (45%), Gaps = 36/291 (12%)

Query: 1   MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL-----FALPG 55
             + A+ E   VCVTG   F+G  +V  LL + Y S+   V    D   L     F   G
Sbjct: 45  GDAGADAEARLVCVTGGVSFLGLAIVDRLLRHGY-SVRIAVDTQEDKEKLREMEMFGEMG 103

Query: 56  AGDANLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDP------EKELILPAVQ 109
             +  +    A++ +  ++  A +GC GVFH ++       VDP       K +     +
Sbjct: 104 RSNDGIWTVMANLTEPESLHEAFDGCAGVFHTSAF------VDPAGLSGYTKSMAELEAK 157

Query: 110 GTLNVLEAAKRF-GVRRVVVTSSISAIVPNPGWKGK-------VFDETSWTDLEYCKSRK 161
            + NV+EA  R   VR+ V TSS+ A V    W+         V DE SW+D  +C+  K
Sbjct: 158 ASENVIEACVRTESVRKCVFTSSLLACV----WRQNYPHDLPPVIDEESWSDESFCRDNK 213

Query: 162 KWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ 221
            WY + K  AEKAAW  A   G+ +  I PA   GP    +   +       L+G+++  
Sbjct: 214 LWYALGKLKAEKAAWRAARGKGLKLATICPALVTGP---GFFRRNSTATIAYLKGAQEML 270

Query: 222 EYHWLGAVPVKDVAKAQVLLFE---SPAASGRYLCTNGIYQFGDFAERVSK 269
               L    V+ +A+A V ++E   +  A GRY+C + +    D AE +++
Sbjct: 271 ADGLLATADVERLAEAHVCVYEAMGNKTAFGRYICFDHVVSREDEAEELAR 321

Length = 367

>gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase

 Score =  115 bits (291), Expect = 2e-30
 Identities = 71/192 (36%), Positives = 103/192 (53%), Gaps = 24/192 (12%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            V VTGA GF+G+ +V+ LL+     +   V P SD  +L  L         + E D+ D
Sbjct: 2   KVLVTGATGFVGSAVVRLLLEQGEE-VRVLVRPTSDRRNLEGLDV------EIVEGDLRD 54

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
             ++ +AV GC+ +FHVA+   L  P DPE E+    V+GT N+L AA   GV RVV TS
Sbjct: 55  PASLRKAVAGCRALFHVAADYRLWAP-DPE-EMYAANVEGTRNLLRAALEAGVERVVYTS 112

Query: 131 SISAIVPNPGWKGKVFDETSWTDLE-----YCKSRKKWYPVSKTLAEKAAWEFAEKHGVD 185
           S++ +       G   DET+ + L+     Y +        SK LAE+AA E A + G+ 
Sbjct: 113 SVATLGVRG--DGTPADETTPSSLDDMIGHYKR--------SKFLAEQAALEMAAEKGLP 162

Query: 186 VVAIHPATCLGP 197
           VV ++P+T +GP
Sbjct: 163 VVIVNPSTPIGP 174

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328

>gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs

 Score =  107 bits (268), Expect = 3e-27
 Identities = 60/193 (31%), Positives = 81/193 (41%), Gaps = 19/193 (9%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            V VTGA+GFIG+ L + LL   +  + A     S +S    L  A          DV D
Sbjct: 1   NVLVTGADGFIGSHLTERLLREGH-EVRALDIYNSFNSW-GLLDNAVHDRFHFISGDVRD 58

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDP-VDPEKELILPAVQGTLNVLEAAKRFGVRRVVVT 129
           +  V   V+ C  VFH+A+   +      P    +   V GTLNVLEAA     +RVV T
Sbjct: 59  ASEVEYLVKKCDVVFHLAALIAIPYSYTAPL-SYVETNVFGTLNVLEAACVLYRKRVVHT 117

Query: 130 SS-----ISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGV 184
           S+      +  VP         DE     L Y    +  Y  SK  A++ A+ +    G+
Sbjct: 118 STSEVYGTAQDVP--------IDEDH--PLLYINKPRSPYSASKQGADRLAYSYGRSFGL 167

Query: 185 DVVAIHPATCLGP 197
            V  I P    GP
Sbjct: 168 PVTIIRPFNTYGP 180

Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score = 97.0 bits (242), Expect = 4e-24
 Identities = 69/255 (27%), Positives = 98/255 (38%), Gaps = 40/255 (15%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           + VTG  GFIG+ LV+ LL   Y  I          S            +R  E D+ D 
Sbjct: 1   ILVTGGTGFIGSHLVRRLLQEGYEVIV---LGRRRRSESL-----NTGRIRFHEGDLTDP 52

Query: 72  GAVSRAVEGCK--GVFHVASPC----TLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRR 125
            A+ R +   +   V H+A+      + EDP D     I   V GTL +LEAA+R GV+R
Sbjct: 53  DALERLLAEVQPDAVIHLAAQSGVGASFEDPAD----FIRANVLGTLRLLEAARRAGVKR 108

Query: 126 VVVTSSISAIVPNPGWKGKVFDETSWT-DLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGV 184
            V  SS S +  +         E +    L         Y  +K  AE+    +A  +G+
Sbjct: 109 FVFASS-SEVYGDVA--DPPITEDTPLGPLSP-------YAAAKLAAERLVEAYARAYGL 158

Query: 185 DVVAIHPATCLGPLMQ--------PYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAK 236
             V +      GP           P L       + +L     TQ   +   + V DVA+
Sbjct: 159 RAVILRLFNVYGPGNPDPFVTHVIPALIRRILEGKPILLLGDGTQRRDF---LYVDDVAR 215

Query: 237 AQVLLFESPAASGRY 251
           A +L  E P     Y
Sbjct: 216 AILLALEHPDGGEIY 230

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs

 Score = 91.0 bits (226), Expect = 3e-21
 Identities = 64/199 (32%), Positives = 87/199 (43%), Gaps = 22/199 (11%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
           +V VTG +GF G  LVK LL+   T +    F  +      AL      N+   + D+ D
Sbjct: 1   SVLVTGGSGFFGERLVKQLLERGGTYVR--SFDIAPP--GEALSAWQHPNIEFLKGDITD 56

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
              V +A+ G   VFH A+   L  P D   E+    V GT NVL+A +R GV++ V TS
Sbjct: 57  RNDVEQALSGADCVFHTAAIVPLAGPRDLYWEV---NVGGTQNVLDACQRCGVQKFVYTS 113

Query: 131 SISAIVPNPGWKGKVF---DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVV 187
           S S I       G+     DET    L Y       Y  +K +AE    E   +  +   
Sbjct: 114 SSSVIFG-----GQNIHNGDET----LPYPPLDSDMYAETKAIAEIIVLEANGRDDLLTC 164

Query: 188 AIHPATCLGP---LMQPYL 203
           A+ PA   GP    + P L
Sbjct: 165 ALRPAGIFGPGDQGLVPIL 183

Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331

>gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs

 Score = 85.4 bits (212), Expect = 4e-20
 Identities = 63/250 (25%), Positives = 96/250 (38%), Gaps = 66/250 (26%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           + VTG  GFIG+ LV+ LL+  +                            V   D LD 
Sbjct: 1   ILVTGGAGFIGSHLVRRLLERGH---------------------------EVVVIDRLDV 33

Query: 72  GAVSRAVEGCKGVFHVAS----PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVV 127
                       V H+A+    P + ++P     E     V GTLN+LEAA++ GV+R V
Sbjct: 34  ------------VVHLAALVGVPASWDNPD----EDFETNVVGTLNLLEAARKAGVKRFV 77

Query: 128 VTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVV 187
             SS S        +G   +E +        S    Y VSK  AE     + E +G+ VV
Sbjct: 78  YASSASV---YGSPEGLPEEEETPP---RPLSP---YGVSKLAAEHLLRSYGESYGLPVV 128

Query: 188 AIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY-------HWLGAVPVKDVAKAQVL 240
            +  A   GP  +P L+    V+   ++ + + +              + V DV +A + 
Sbjct: 129 ILRLANVYGPGQRPRLD---GVVNDFIRRALEGKPLTVFGGGNQTRDFIHVDDVVRAILH 185

Query: 241 LFESPAASGR 250
             E+P   G 
Sbjct: 186 ALENPLEGGG 195

Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200

>gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs

 Score = 85.7 bits (213), Expect = 2e-19
 Identities = 74/255 (29%), Positives = 109/255 (42%), Gaps = 37/255 (14%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           V VTG  GFIG+ LV+ LL+  +  I   V     +     LP     N++  E D+ D 
Sbjct: 2   VLVTGGAGFIGSHLVERLLERGHEVI---VLDNLSTGKKENLP-EVKPNVKFIEGDIRDD 57

Query: 72  GAVSRAVEGCKGVFHVAS----PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVV 127
             V  A EG   VFH A+    P ++EDP+   +  +L    GTLN+LEAA++ GV+R V
Sbjct: 58  ELVEFAFEGVDYVFHQAAQASVPRSIEDPIKDHEVNVL----GTLNLLEAARKAGVKRFV 113

Query: 128 VTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVV 187
             SS S     P       DE    +          Y VSK   E     FA  +G+  V
Sbjct: 114 YASSSSVYGDPP---YLPKDEDHPPNPLSP------YAVSKYAGELYCQVFARLYGLPTV 164

Query: 188 AIHPATCLGPLMQP---YLNASCAVLQQLLQG--------SKDTQEYHWLGAVPVKDVAK 236
           ++      GP   P   Y       +++ L+G         + T+++       V+DV +
Sbjct: 165 SLRYFNVYGPRQDPNGGYAAVIPIFIERALKGEPPTIYGDGEQTRDF-----TYVEDVVE 219

Query: 237 AQVLLFESPAASGRY 251
           A +L   + A    Y
Sbjct: 220 ANLLAATAGAGGEVY 234

This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304

>gnl|CDD|200431 TIGR04180, EDH_00030, NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family

 Score = 81.6 bits (202), Expect = 4e-18
 Identities = 49/129 (37%), Positives = 68/129 (52%), Gaps = 17/129 (13%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSH--LFALPGAGDANLRVFEADVL 69
           V VTGA+GFIG+ LV+ L+   Y  + A V   S +S   L   P      + V   D+ 
Sbjct: 1   VLVTGADGFIGSHLVEALVRQGYE-VRAFVLYNSFNSWGWLDTSPPEVKDKIEVVTGDIR 59

Query: 70  DSGAVSRAVEGCKGVFHVAS----PCTLEDP---VDPEKELILPAVQGTLNVLEAAKRFG 122
           D  +V +A++GC  VFH+A+    P +   P   VD         V GTLNVL+AA+  G
Sbjct: 60  DPDSVRKAMKGCDVVFHLAALIAIPYSYIAPDSYVDTN-------VTGTLNVLQAARDLG 112

Query: 123 VRRVVVTSS 131
           V +VV TS+
Sbjct: 113 VEKVVHTST 121

This clade within the NAD dependent epimerase/dehydratase superfamily (pfam01370) is characterized by inclusion of its members within a cassette of seven distinctive enzymes. These include four genes homologous to the elements of the neuraminic (sialic) acid biosynthesis cluster (NeuABCD), an aminotransferase and a nucleotidyltransferase in addition to the epimerase/dehydratase. Together it is very likely that these enzymes direct the biosynthesis of a nine-carbon sugar analagous to CMP-neuraminic acid. These seven genes form the core of the cassette, although they are often accompanied by additional genes that may further modify the product sugar. Although this cassette is widely distributed in bacteria, the family nomenclature arises from the instance in Leptospira interrogans serovar Lai, str. 56601, where it appears as the 30th gene in the 91-gene lipopolysaccharide biosynthesis cluster. Length = 297

>gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs

 Score = 80.9 bits (200), Expect = 8e-18
 Identities = 65/276 (23%), Positives = 99/276 (35%), Gaps = 32/276 (11%)

Query: 14  VTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS--SHLFALPGAGDANLRVFEADV--- 68
           VTG  GF+G  LVK LL+N +  +   V   S           G     +RV E D+   
Sbjct: 3   VTGGTGFLGRHLVKRLLENGF-KVLVLVRSESLGEAHERIEEAGLEADRVRVLEGDLTQP 61

Query: 69  ---LDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRR 125
              L + A          V H A+     D   P ++     + GT +VLE A R  ++R
Sbjct: 62  NLGLSAAASRELAGKVDHVIHCAA---SYDFQAPNEDAWRTNIDGTEHVLELAARLDIQR 118

Query: 126 VVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVD 185
               S+        G           T+L   ++ K  Y  SK  AE+     A +  + 
Sbjct: 119 FHYVSTAYVAGNREGN-------IRETELNPGQNFKNPYEQSKAEAEQLVRAAATQ--IP 169

Query: 186 VVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY--------HWLGAVPVKDVAKA 237
           +    P+  +G      +      L +LL        +          L  VPV  VA A
Sbjct: 170 LTVYRPSIVVGDSKTGRIE-KIDGLYELLNLLAKLGRWLPMPGNKGARLNLVPVDYVADA 228

Query: 238 QVLLFESPAASGR-YLCTNG-IYQFGDFAERVSKLF 271
            V L + P A+G+ +  T+       + A+     F
Sbjct: 229 IVYLSKKPEANGQIFHLTDPTPQTLREIADLFKSAF 264

This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs

 Score = 80.9 bits (200), Expect = 1e-17
 Identities = 50/189 (26%), Positives = 70/189 (37%), Gaps = 23/189 (12%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            V VTGANGFIG  LV  LL        A         +      +         A++ D
Sbjct: 1   KVLVTGANGFIGRALVDKLLSRGEEVRIA-------VRNAENAEPSVVL------AELPD 47

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAV--QGTLNVLEAAKRFGVRRVVV 128
             + +    G   V H+A+   + +    +       V  + T  +  AA R GV+R V 
Sbjct: 48  IDSFTDLFLGVDAVVHLAARVHVMNDQGADPLSDYRKVNTELTRRLARAAARQGVKRFVF 107

Query: 129 TSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVA 188
            SS+          G  FDET     +        Y  SK  AE+A  E     G++VV 
Sbjct: 108 LSSVKVNG-EGT-VGAPFDETDPPAPQ------DAYGRSKLEAERALLELGASDGMEVVI 159

Query: 189 IHPATCLGP 197
           + P    GP
Sbjct: 160 LRPPMVYGP 168

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303

>gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family

 Score = 78.9 bits (195), Expect = 4e-17
 Identities = 71/280 (25%), Positives = 108/280 (38%), Gaps = 39/280 (13%)

Query: 14  VTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVF-EADVLDSG 72
           VTG  GF+G  +V+ LL          VF    S  L  L       +  + E DV D  
Sbjct: 2   VTGGGGFLGRHIVRLLLREG-ELQEVRVFDLRFSPEL--LEDFSKLQVITYIEGDVTDKQ 58

Query: 73  AVSRAVEGCKGVFHVASPCTLED--PVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
            + RA++G   V H A+   + D         ++   V+GT NVL+A  + GVR +V TS
Sbjct: 59  DLRRALQGSDVVIHTAA---IIDVFGKAYRDTIMKVNVKGTQNVLDACVKAGVRVLVYTS 115

Query: 131 SISAIVPNPGWKGKVF---DETSWTDLEYCKSRKKWYPVSKTLAEKA-----AWEFAEKH 182
           S+  + PN    G+     DET      Y  + +  YP SK LAEK              
Sbjct: 116 SMEVVGPNSY--GQPIVNGDET----TPYESTHQDPYPESKALAEKLVLKANGSTLKNGG 169

Query: 183 GVDVVAIHPATCLGP---LMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQV 239
            +   A+ PA   G     + P+L           +             V V +VA A +
Sbjct: 170 RLYTCALRPAGIFGEGDPFLFPFLVRLLKNGLAKFRTGDKNVLSDR---VYVGNVAWAHI 226

Query: 240 LL-------FESPAASGR-YLCTNG--IYQFGDFAERVSK 269
           L         ++ + +G+ Y  ++      + DF   + K
Sbjct: 227 LAARALQDPKKASSIAGQFYFISDDTPHNSYDDFNRTLLK 266

The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280

>gnl|CDD|187671 cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD (hydroxysteroid dehydrogenase) and HSD3B1(delta 5-delta 4-isomerase)-like, extended (e) SDRs

 Score = 77.2 bits (190), Expect = 3e-16
 Identities = 51/164 (31%), Positives = 70/164 (42%), Gaps = 8/164 (4%)

Query: 14  VTGANGFIGTWLVKTLLDNNYTSINATVF---PGSDSSHLFALPGAGDANLRVFEADVLD 70
           VTG  GF+G  +++ LL+         V     G +    F     G   +   E D+ D
Sbjct: 4   VTGGGGFLGQHIIRLLLERKEELKEIRVLDKAFGPELIEHFE-KSQGKTYVTDIEGDIKD 62

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
              + RA +G   V H A+   +  P + E EL    V GT  VLEA  +  V+R+V TS
Sbjct: 63  LSFLFRACQGVSVVIHTAAIVDVFGPPNYE-ELEEVNVNGTQAVLEACVQNNVKRLVYTS 121

Query: 131 SISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKA 174
           SI    PN  +KG+        D  Y  +    Y  SK LAE  
Sbjct: 122 SIEVAGPN--FKGRPI-FNGVEDTPYEDTSTPPYASSKLLAENI 162

This extended-SDR subgroup includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7], and related proteins. These proteins have the characteristic active site tetrad and NAD(P)-binding motif of extended SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. C(27) 3beta-HSD is a membrane-bound enzyme of the endoplasmic reticulum, it catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 354

>gnl|CDD|187673 cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD(P)H steroid dehydrogenase-like protein)-like, extended (e) SDRs

 Score = 70.5 bits (173), Expect = 5e-14
 Identities = 74/274 (27%), Positives = 115/274 (41%), Gaps = 37/274 (13%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
           +  V G +GF+G  LV+ LL     +++  VF   D    F L  +    ++    D+ D
Sbjct: 1   SCLVVGGSGFLGRHLVEQLLRRGNPTVH--VF---DIRPTFELDPSSSGRVQFHTGDLTD 55

Query: 71  SGAVSRAVEGCKG---VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVV 127
              + +A    KG   VFH ASP    +     K      VQGT NV+EA ++ GV+++V
Sbjct: 56  PQDLEKAFN-EKGPNVVFHTASPDHGSNDDLYYK----VNVQGTRNVIEACRKCGVKKLV 110

Query: 128 VTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEF-AEKHGVDV 186
            TSS S +           DE+    L Y    +  Y  +K LAEK   +    + G+  
Sbjct: 111 YTSSASVVFNGQDIING--DES----LPYPDKHQDAYNETKALAEKLVLKANDPESGLLT 164

Query: 187 VAIHPATCLGP---LMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFE 243
            A+ PA   GP    + P L  +    +   Q       + +     V++VA A +L  +
Sbjct: 165 CALRPAGIFGPGDRQLVPGLLKAAKNGKTKFQIGDGNNLFDF---TYVENVAHAHILAAD 221

Query: 244 -------SPAASGR-YLCTNG--IYQFGDFAERV 267
                  +   +G  +  TN   IY F DFA  +
Sbjct: 222 ALLSSSHAETVAGEAFFITNDEPIY-FWDFARAI 254

This subgroup includes human NSDHL and related proteins. These proteins have the characteristic active site tetrad of extended SDRs, and also have a close match to their NAD(P)-binding motif. Human NSDHL is a 3beta-hydroxysteroid dehydrogenase (3 beta-HSD) which functions in the cholesterol biosynthetic pathway. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Mutations in the gene encoding NSDHL cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. This subgroup also includes an unusual bifunctional [3beta-hydroxysteroid dehydrogenase (3b-HSD)/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 335

>gnl|CDD|187541 cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs

 Score = 65.7 bits (161), Expect = 2e-12
 Identities = 53/217 (24%), Positives = 79/217 (36%), Gaps = 62/217 (28%)

Query: 10  ETVCVTGANGFIGTWLVKTLL---------DNNYTSINATVFPGSDSSHLFALPGAGDAN 60
           + + +TG  GF+G+ L   LL         DN +T     +       HL      G  N
Sbjct: 1   KRILITGGAGFLGSHLCDRLLEDGHEVICVDNFFTGRKRNI------EHL-----IGHPN 49

Query: 61  LRVFEADVLDS--GAVSRAVEGCKGVFHVASPCT----LEDPVDPEKELILPAVQGTLNV 114
                 DV +     V +       ++H+A P +      +P+    + +   V GTLN+
Sbjct: 50  FEFIRHDVTEPLYLEVDQ-------IYHLACPASPVHYQYNPI----KTLKTNVLGTLNM 98

Query: 115 LEAAKRFGVRRVVVTSSISA-----IVPNPGWKGKVFDETSW-----TDLEYCKSRKKWY 164
           L  AKR G  RV++ S+        + P P        E+ W          C      Y
Sbjct: 99  LGLAKRVGA-RVLLASTSEVYGDPEVHPQP--------ESYWGNVNPIGPRSC------Y 143

Query: 165 PVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQP 201
              K +AE     +  +HGVDV         GP M P
Sbjct: 144 DEGKRVAETLCMAYHRQHGVDVRIARIFNTYGPRMHP 180

UGD catalyzes the formation of UDP-xylose from UDP-glucuronate; it is an extended-SDR, and has the characteristic glycine-rich NAD-binding pattern, TGXXGXXG, and active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5

 Score = 64.2 bits (157), Expect = 2e-12
 Identities = 42/137 (30%), Positives = 63/137 (45%), Gaps = 16/137 (11%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            V V GA G +G  +V+ LLD  Y  + A V   S +  L A      A   V   D+ D
Sbjct: 1   KVLVVGATGKVGRHVVRELLDRGYQ-VRALVRDPSQAEKLEA------AGAEVVVGDLTD 53

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAV--QGTLNVLEAAKRFGVRRVVV 128
           + +++ A+EG   V   A     +     E      AV   G +N+++AAK+ GV+R V+
Sbjct: 54  AESLAAALEGIDAVISAAG-SGGKGGPRTE------AVDYDGNINLIDAAKKAGVKRFVL 106

Query: 129 TSSISAIVPNPGWKGKV 145
            SSI A  P+   +   
Sbjct: 107 VSSIGADKPSHPLEALG 123

This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|187545 cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, subgroup 2, extended (e) SDRs

 Score = 64.2 bits (157), Expect = 7e-12
 Identities = 41/122 (33%), Positives = 56/122 (45%), Gaps = 7/122 (5%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPG-SDSSHLFALPGAGDANLRVFEADVLD 70
           + VTG  GFIG+ LV  LL+         V    S        P   +   R  + D+LD
Sbjct: 2   ILVTGGAGFIGSHLVDRLLEEGN---EVVVVDNLSSGRRENIEPEFENKAFRFVKRDLLD 58

Query: 71  SGAVSRAVEGCKGVFHVAS-PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVT 129
           + A   A +    VFH+A+ P       DP+ +L    V  T NVLEA +  GV+R+V  
Sbjct: 59  T-ADKVAKKDGDTVFHLAANPDVRLGATDPDIDLEE-NVLATYNVLEAMRANGVKRIVFA 116

Query: 130 SS 131
           SS
Sbjct: 117 SS 118

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of archaeal and bacterial proteins, and has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187561 cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs

 Score = 62.7 bits (153), Expect = 1e-11
 Identities = 40/135 (29%), Positives = 59/135 (43%), Gaps = 18/135 (13%)

Query: 14  VTGANGFIGTWLVKTLLDNNYTSINA-TVFPGSDSSHLFALPGAGDANLRVFEADVLDSG 72
           V GA G  G  +V+ LL +    + A T  P S ++   A PG       V + D+ D  
Sbjct: 3   VFGATGKQGGSVVRALLKDPGFKVRALTRDPSSPAAKALAAPGV-----EVVQGDLDDPE 57

Query: 73  AVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSI 132
           ++  A++G  GVF V            E E+     QG  NV++AAKR GV+  V +S  
Sbjct: 58  SLEAALKGVYGVFLVTDF----WEAGGEDEI----AQGK-NVVDAAKRAGVQHFVFSSVP 108

Query: 133 SA---IVPNPGWKGK 144
                 +  P +  K
Sbjct: 109 DVEKLTLAVPHFDSK 123

NmrA and HSCARG like proteins. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 242

>gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding

 Score = 60.8 bits (148), Expect = 2e-11
 Identities = 48/224 (21%), Positives = 67/224 (29%), Gaps = 51/224 (22%)

Query: 14  VTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGA 73
           V GA G  G  LVK LL         T    + S        A    +   + D+ D   
Sbjct: 3   VIGATGKTGRRLVKELLARG---HQVTALSRNPSK-------APAPGVTPVQKDLFDLAD 52

Query: 74  VSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSIS 133
           ++ A+ G   V           P D +         G  ++L+AA R GVRR+VV S+  
Sbjct: 53  LAEALAGVDAVVDAFGA----RPDDSD---------GVKHLLDAAARAGVRRIVVVSAAG 99

Query: 134 AIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPAT 193
                PG                              A+ AA E     G+D   + P  
Sbjct: 100 LYRDEPGTFRLDDAPL---------------FPPYARAKAAAEELLRASGLDWTIVRP-- 142

Query: 194 CLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKA 237
             G L               +    D        ++   DVA A
Sbjct: 143 --GALFDEEGE------TYEIGTEGDPAG---ESSISRADVAAA 175

Length = 182

>gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs

 Score = 62.3 bits (152), Expect = 2e-11
 Identities = 47/191 (24%), Positives = 75/191 (39%), Gaps = 18/191 (9%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           V + G NGFIG+ LV  LL+         VF    S   + LP  G   +   + D  + 
Sbjct: 2   VLIVGGNGFIGSHLVDALLEE---GPQVRVF--DRSIPPYELPLGG---VDYIKGDYENR 53

Query: 72  GAVSRAVEGCKGVFHVASPCT-LEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
             +  A+ G   V H+AS         +P  + I   V  T+ +LEA    G+ +++  S
Sbjct: 54  ADLESALVGIDTVIHLASTTNPATSNKNPILD-IQTNVAPTVQLLEACAAAGIGKIIFAS 112

Query: 131 SISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIH 190
           S   +   P  +     E+  T           Y +SK   EK    +   +G+D   + 
Sbjct: 113 SGGTVYGVP--EQLPISESDPTLPI------SSYGISKLAIEKYLRLYQYLYGLDYTVLR 164

Query: 191 PATCLGPLMQP 201
            +   GP  +P
Sbjct: 165 ISNPYGPGQRP 175

This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|224011 COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 62.3 bits (152), Expect = 6e-11
 Identities = 50/138 (36%), Positives = 68/138 (49%), Gaps = 18/138 (13%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP-----GAGDANLRVFE 65
           TV VTG  G IG+ L + +L  N   I   +F   D   L+ +         +  LR + 
Sbjct: 252 TVLVTGGGGSIGSELCRQILKFNPKEI--ILF-SRDEYKLYLIDMELREKFPELKLRFYI 308

Query: 66  ADVLDSGAVSRAVEGCK--GVFHVAS----PCTLEDPVDPEKELILPAVQGTLNVLEAAK 119
            DV D   V RA+EG K   VFH A+    P  +E   +PE E I   V GT NV EAA 
Sbjct: 309 GDVRDRDRVERAMEGHKVDIVFHAAALKHVP-LVEY--NPE-EAIKTNVLGTENVAEAAI 364

Query: 120 RFGVRRVVVTSSISAIVP 137
           + GV++ V+ S+  A+ P
Sbjct: 365 KNGVKKFVLISTDKAVNP 382

Length = 588

>gnl|CDD|187568 cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, extended (e) SDRs

 Score = 57.7 bits (140), Expect = 1e-09
 Identities = 33/147 (22%), Positives = 58/147 (39%), Gaps = 5/147 (3%)

Query: 10  ETVCVTGANGFIGTWLVKTLLDNNY--TSINATVFPGSDSSHLFALPGAGDANLRVFEAD 67
             V +TG  GFIG+ L +  L   +     +  +  GS  +  +      D  +R    D
Sbjct: 1   MRVLITGGAGFIGSNLARFFLKQGWEVIGFDNLMRRGSFGNLAWLKANREDGGVRFVHGD 60

Query: 68  VLDSGAVSRAVEGCKGVFHVAS-PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRV 126
           + +   +    E    + H A+ P        P  +    A+ GTLNVLEAA++      
Sbjct: 61  IRNRNDLEDLFEDIDLIIHTAAQPSVTTSASSPRLDFETNAL-GTLNVLEAARQHAPNAP 119

Query: 127 VVTSSISAIVPN-PGWKGKVFDETSWT 152
            + +S + +  + P +      ET + 
Sbjct: 120 FIFTSTNKVYGDLPNYLPLEELETRYE 146

CDP-tyvelose 2-epimerase is a tetrameric SDR that catalyzes the conversion of CDP-D-paratose to CDP-D-tyvelose, the last step in tyvelose biosynthesis. This subgroup is a member of the extended SDR subfamily, with a characteristic active site tetrad and NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 337

>gnl|CDD|217199 pfam02719, Polysacc_synt_2, Polysaccharide biosynthesis protein

 Score = 57.5 bits (140), Expect = 1e-09
 Identities = 47/137 (34%), Positives = 62/137 (45%), Gaps = 18/137 (13%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL-----PGAGDANLRVFEA 66
           V VTG  G IG+ L + +L  N   I   +F   D   L+ +         D  LR F  
Sbjct: 1   VLVTGGGGSIGSELCRQILKFNPKKI--ILF-SRDEFKLYEIRQELRQEYNDPKLRFFIG 57

Query: 67  DVLDSGAVSRAVE--GCKGVFHVAS----PCTLEDPVDPEKELILPAVQGTLNVLEAAKR 120
           DV D   + RA+E  G   VFH A+    P    +P+    E I   V GT NV EAA  
Sbjct: 58  DVRDRERLERAMEQHGVDTVFHAAALKHVPLVEYNPM----EAIKTNVLGTENVAEAAIE 113

Query: 121 FGVRRVVVTSSISAIVP 137
            GV + V+ S+  A+ P
Sbjct: 114 NGVEKFVLISTDKAVNP 130

This is a family of diverse bacterial polysaccharide biosynthesis proteins including the CapD protein, WalL protein mannosyl-transferase and several putative epimerases (e.g. WbiI). Length = 280

>gnl|CDD|187555 cd05244, BVR-B_like_SDR_a, biliverdin IX beta reductase (BVR-B, aka flavin reductase)-like proteins; atypical (a) SDRs

 Score = 53.4 bits (129), Expect = 1e-08
 Identities = 38/183 (20%), Positives = 60/183 (32%), Gaps = 34/183 (18%)

Query: 14  VTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGA 73
           + GA G  G+ +V+  L   +     T     D + L A        L+V + DVLD   
Sbjct: 4   IIGATGRTGSAIVREALARGH---EVTALV-RDPAKLPAE----HEKLKVVQGDVLDLED 55

Query: 74  VSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSIS 133
           V  A+EG   V           P            +GT N++ A K  GV+R++V     
Sbjct: 56  VKEALEGQDAVISALGTRNDLSPTTL-------HSEGTRNIVSAMKAAGVKRLIVVGGAG 108

Query: 134 AIVPNPG----WKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAI 189
           ++   P         +F                   V          +   + G+D  A+
Sbjct: 109 SLDDRPKVTLVLDTLLF-------------PPALRRV--AEDHARMLKVLRESGLDWTAV 153

Query: 190 HPA 192
            P 
Sbjct: 154 RPP 156

Human BVR-B catalyzes pyridine nucleotide-dependent production of bilirubin-IX beta during fetal development; in the adult BVR-B has flavin and ferric reductase activities. Human BVR-B catalyzes the reduction of FMN, FAD, and riboflavin. Recognition of flavin occurs mostly by hydrophobic interactions, accounting for the broad substrate specificity. Atypical SDRs are distinct from classical SDRs. BVR-B does not share the key catalytic triad, or conserved tyrosine typical of SDRs. The glycine-rich NADP-binding motif of BVR-B is GXXGXXG, which is similar but not identical to the pattern seen in extended SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 207

>gnl|CDD|187548 cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-linked N-acetylglucosamine) inverting 4,6-dehydratase, extended (e) SDRs

 Score = 53.0 bits (128), Expect = 3e-08
 Identities = 45/138 (32%), Positives = 61/138 (44%), Gaps = 18/138 (13%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF----ALPGAGDA-NLRVFE 65
           T+ VTG  G IG+ LV+ +L          +    D + L      L        LR   
Sbjct: 4   TILVTGGAGSIGSELVRQILK---FGPKKLIVFDRDENKLHELVRELRSRFPHDKLRFII 60

Query: 66  ADVLDSGAVSRAVE--GCKGVFHVAS----PCTLEDPVDPEKELILPAVQGTLNVLEAAK 119
            DV D   + RA +  G   VFH A+    P ++ED   PE E I   V GT NV++AA 
Sbjct: 61  GDVRDKERLRRAFKERGPDIVFHAAALKHVP-SMEDN--PE-EAIKTNVLGTKNVIDAAI 116

Query: 120 RFGVRRVVVTSSISAIVP 137
             GV + V  S+  A+ P
Sbjct: 117 ENGVEKFVCISTDKAVNP 134

UDP-Glcnac inverting 4,6-dehydratase was identified in Helicobacter pylori as the hexameric flaA1 gene product (FlaA1). FlaA1 is hexameric, possesses UDP-GlcNAc-inverting 4,6-dehydratase activity, and catalyzes the first step in the creation of a pseudaminic acid derivative in protein glycosylation. Although this subgroup has the NADP-binding motif characteristic of extended SDRs, its members tend to have a Met substituted for the active site Tyr found in most SDR families. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 287

>gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs

 Score = 52.7 bits (127), Expect = 4e-08
 Identities = 39/155 (25%), Positives = 59/155 (38%), Gaps = 23/155 (14%)

Query: 14  VTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGA 73
           VTGA G +GT +V+ LL     S+ A V     +   FA  G       V + D  D   
Sbjct: 3   VTGATGKLGTAVVELLLAKV-ASVVALVRNPEKAK-AFAADGV-----EVRQGDYDDPET 55

Query: 74  VSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS--- 130
           + RA EG   +  ++    LED +   K           N ++AAK+ GV+ +V  S   
Sbjct: 56  LERAFEGVDRLLLISPSD-LEDRIQQHK-----------NFIDAAKQAGVKHIVYLSASG 103

Query: 131 -SISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWY 164
               +        G        + + Y   R  W+
Sbjct: 104 ADEDSPFLLARDHGATEKYLEASGIPYTILRPGWF 138

TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272

>gnl|CDD|187549 cd05238, Gne_like_SDR_e, Escherichia coli Gne (a nucleoside-diphosphate-sugar 4-epimerase)-like, extended (e) SDRs

 Score = 52.0 bits (125), Expect = 9e-08
 Identities = 46/192 (23%), Positives = 72/192 (37%), Gaps = 23/192 (11%)

Query: 11  TVCVTGANGFIGTWLVKTLLDN--NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADV 68
            V +TGA+GF+G  L + LL +  N   I   V      S        G   +     D+
Sbjct: 2   KVLITGASGFVGQRLAERLLSDVPNERLILIDVVSPKAPS--------GAPRVTQIAGDL 53

Query: 69  LDSGAVSRAVEG-CKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRRV 126
                +     G    VFH+A+  +     D +    +  V GT N+LEA ++ G   R 
Sbjct: 54  AVPALIEALANGRPDVVFHLAAIVSGGAEADFDLGYRV-NVDGTRNLLEALRKNGPKPRF 112

Query: 127 VVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDV 186
           V TSS++           V D T+             Y   K + E    +++ +  VD 
Sbjct: 113 VFTSSLAVYGLPL--PNPVTDHTALDPASS-------YGAQKAMCELLLNDYSRRGFVDG 163

Query: 187 VAIHPAT-CLGP 197
             +   T C+ P
Sbjct: 164 RTLRLPTVCVRP 175

Nucleoside-diphosphate-sugar 4-epimerase has the characteristic active site tetrad and NAD-binding motif of the extended SDR, and is related to more specifically defined epimerases such as UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), which catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup includes Escherichia coli 055:H7 Gne, a UDP-GlcNAc 4-epimerase, essential for O55 antigen synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187558 cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs

 Score = 51.8 bits (125), Expect = 1e-07
 Identities = 39/129 (30%), Positives = 56/129 (43%), Gaps = 17/129 (13%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            V VTG  G+IG+  V  LL+  Y   +  V     + H  ALP      +  +E D+ D
Sbjct: 1   KVLVTGGAGYIGSHTVVELLEAGY---DVVVLDNLSNGHREALPRIEKIRIEFYEGDIRD 57

Query: 71  SGAVSRAVEGCK--GVFHVASPCTLEDPVDPEKELILPA------VQGTLNVLEAAKRFG 122
             A+ +     K   V H A+   + + V        P       V GTLN+LEA +  G
Sbjct: 58  RAALDKVFAEHKIDAVIHFAALKAVGESVQ------KPLKYYDNNVVGTLNLLEAMRAHG 111

Query: 123 VRRVVVTSS 131
           V+  V +SS
Sbjct: 112 VKNFVFSSS 120

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 323

>gnl|CDD|187551 cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs

 Score = 50.8 bits (122), Expect = 2e-07
 Identities = 55/192 (28%), Positives = 71/192 (36%), Gaps = 26/192 (13%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVF-EADVLD 70
           + VTGA G +G  L + L  +    +            L      G      +   D+ D
Sbjct: 1   ILVTGAAGGLGRLLARRLAASPR--VIGVDG-------LDRRRPPGSPPKVEYVRLDIRD 51

Query: 71  SGAVSRAVE-GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVT 129
             A     E     V H+A    L+ P D   E     V GT NVL+A    GV RVVVT
Sbjct: 52  PAAADVFREREADAVVHLAF--ILDPPRDGA-ERHRINVDGTQNVLDACAAAGVPRVVVT 108

Query: 130 SSI---SAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH-GVD 185
           SS+    A   NP         T    L         Y   K   E+   EF  +H  ++
Sbjct: 109 SSVAVYGAHPDNPAP------LTEDAPLRGSPEFA--YSRDKAEVEQLLAEFRRRHPELN 160

Query: 186 VVAIHPATCLGP 197
           V  + PAT LGP
Sbjct: 161 VTVLRPATILGP 172

Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 306

>gnl|CDD|224012 COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

 Score = 50.6 bits (122), Expect = 2e-07
 Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 16/127 (12%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            V VTG  G+IG+  V+ LL   +      V     + H  AL        + +E D+LD
Sbjct: 2   KVLVTGGAGYIGSHTVRQLLKTGH---EVVVLDNLSNGHKIALL---KLQFKFYEGDLLD 55

Query: 71  SGAVSR--AVEGCKGVFHVAS----PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR 124
              ++          V H A+      ++++P+    +     V GTLN++EA  + GV+
Sbjct: 56  RALLTAVFEENKIDAVVHFAASISVGESVQNPL----KYYDNNVVGTLNLIEAMLQTGVK 111

Query: 125 RVVVTSS 131
           + + +S+
Sbjct: 112 KFIFSST 118

Length = 329

>gnl|CDD|187562 cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydratase, extended (e) SDRs

 Score = 50.8 bits (122), Expect = 3e-07
 Identities = 41/132 (31%), Positives = 59/132 (44%), Gaps = 21/132 (15%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVF----PGSDSSHLFALPGAGDANLRVFEA 66
            V VTG  GF G+WL   L +     + A V         + +LF L    D  +     
Sbjct: 6   RVLVTGHTGFKGSWLSLWLQE-----LGAKVIGYSLDPPTNPNLFEL-ANLDNKISSTRG 59

Query: 67  DVLDSGAVSRAVEGCKG--VFHVA-SPC---TLEDPVDPEKELILPAVQGTLNVLEAAKR 120
           D+ D  A+  A+   +   VFH+A  P    + +DPV    E     V GT+N+LEA + 
Sbjct: 60  DIRDLNALREAIREYEPEIVFHLAAQPLVRLSYKDPV----ETFETNVMGTVNLLEAIRE 115

Query: 121 FG-VRRVVVTSS 131
            G V+ VV  +S
Sbjct: 116 TGSVKAVVNVTS 127

This subgroup contains CDP-D-glucose 4,6-dehydratase, an extended SDR, which catalyzes the conversion of CDP-D-glucose to CDP-4-keto-6-deoxy-D-glucose. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 336

>gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs

 Score = 49.9 bits (120), Expect = 3e-07
 Identities = 35/131 (26%), Positives = 54/131 (41%), Gaps = 21/131 (16%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDA-NLRVFEADVL 69
            V V GA GFIG ++V  L       I     P    ++   L   GD   +   E D+ 
Sbjct: 2   VVTVFGATGFIGRYVVNRLAKRGSQVI----VPYRCEAYARRLLVMGDLGQVLFVEFDLR 57

Query: 70  DSGAVSRAVEGCK------GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV 123
           D  ++ +A+EG        G  +     + ED V          V+G   + +AAK  GV
Sbjct: 58  DDESIRKALEGSDVVINLVGRLYETKNFSFED-VH---------VEGPERLAKAAKEAGV 107

Query: 124 RRVVVTSSISA 134
            R++  S++ A
Sbjct: 108 ERLIHISALGA 118

This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 49.5 bits (119), Expect = 4e-07
 Identities = 39/150 (26%), Positives = 55/150 (36%), Gaps = 27/150 (18%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS-DSSHLFALPGAGDANLRVFEADVL 69
            V +TG +  IG  L   L    Y      V   + +   L +L    + NL V E DV 
Sbjct: 2   VVLITGCSSGIGLALALALAAQGYR-----VIATARNPDKLESLGELLNDNLEVLELDVT 56

Query: 70  DSGAVSRAVEGCKGVFH----------VASPCTLEDPVDPE--KELILPAVQGTLNVLEA 117
           D  ++  AV+     F                 LE+    E  +EL    V G L V  A
Sbjct: 57  DEESIKAAVKEVIERFGRIDVLVNNAGYGLFGPLEE-TSIEEVRELFEVNVFGPLRVTRA 115

Query: 118 A------KRFGVRRVVVTSSISAIVPNPGW 141
                  +  G  R+V  SS++ +VP P  
Sbjct: 116 FLPLMRKQGSG--RIVNVSSVAGLVPTPFL 143

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|213592 TIGR01179, galE, UDP-glucose-4-epimerase GalE

 Score = 49.6 bits (119), Expect = 5e-07
 Identities = 35/123 (28%), Positives = 57/123 (46%), Gaps = 6/123 (4%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVF-EADVLD 70
           + VTG  G+IG+  V+ LL++ +  +   +     +    ALP         F E D+ D
Sbjct: 2   ILVTGGAGYIGSHTVRQLLESGHEVV---ILDNLSNGSREALPRGERITPVTFVEGDLRD 58

Query: 71  SGAVSRAVEGCK--GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVV 128
              + R  E  K   V H A    + + V    +     V GTLN+LEA ++ GV++ + 
Sbjct: 59  RELLDRLFEEHKIDAVIHFAGLIAVGESVQKPLKYYRNNVVGTLNLLEAMQQAGVKKFIF 118

Query: 129 TSS 131
           +SS
Sbjct: 119 SSS 121

Alternate name: UDPgalactose 4-epimerase This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from This model and described by a separate model [Energy metabolism, Sugars]. Length = 328

>gnl|CDD|219957 pfam08659, KR, KR domain

 Score = 47.5 bits (114), Expect = 1e-06
 Identities = 39/147 (26%), Positives = 59/147 (40%), Gaps = 20/147 (13%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINAT---VFPGSDSSHLFA-LPGAGDANLRVFEA 66
           T  VTG  G +G  L + L +     +        P  ++  L A L   G A + V   
Sbjct: 2   TYLVTGGLGGLGLELARWLAERGARHLVLLSRSGAPDPEAEALLAELEARG-AEVTVVAC 60

Query: 67  DVLDSGAVSRAVEGC-------KGVFHVASPCTLED----PVDPE--KELILPAVQGTLN 113
           DV D  AV   +          +GV H A    L D     +  E    ++ P V G  N
Sbjct: 61  DVSDRDAVRALLAEIRADGPPLRGVIHAAG--VLRDALLANMTAEDFARVLAPKVTGAWN 118

Query: 114 VLEAAKRFGVRRVVVTSSISAIVPNPG 140
           + EA +   +   V+ SSI+ ++ +PG
Sbjct: 119 LHEATRDRPLDFFVLFSSIAGVLGSPG 145

This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181

>gnl|CDD|187660 cd08957, WbmH_like_SDR_e, Bordetella bronchiseptica enzymes WbmH and WbmG-like, extended (e) SDRs

 Score = 48.7 bits (116), Expect = 1e-06
 Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 10/118 (8%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           V +TG  G IG+ L++ LL+  +  +    F      HL   P     NL V E  + D 
Sbjct: 3   VLITGGAGQIGSHLIEHLLERGHQVVVIDNFATGRREHLPDHP-----NLTVVEGSIADK 57

Query: 72  GAVSRAVEGCK--GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVV 127
             V +     K   V H A+    +DP D  ++  L  V G  NV++AAK+ GV+R++
Sbjct: 58  ALVDKLFGDFKPDAVVHTAA--AYKDPDDWYED-TLTNVVGGANVVQAAKKAGVKRLI 112

Bordetella bronchiseptica enzymes WbmH and WbmG, and related proteins. This subgroup exhibits the active site tetrad and NAD-binding motif of the extended SDR family. It has been proposed that the active site in Bordetella WbmG and WbmH cannot function as an epimerase, and that it plays a role in O-antigen synthesis pathway from UDP-2,3-diacetamido-2,3-dideoxy-l-galacturonic acid. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 307

>gnl|CDD|187540 cd05229, SDR_a3, atypical (a) SDRs, subgroup 3

 Score = 48.5 bits (116), Expect = 1e-06
 Identities = 50/247 (20%), Positives = 88/247 (35%), Gaps = 40/247 (16%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
           T  V GA+G IG  + + L    +     +               A    + +  AD +D
Sbjct: 1   TAHVLGASGPIGREVARELRRRGWDVRLVSRSGSKL---------AWLPGVEIVAADAMD 51

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
           + +V  A  G   ++H A+P           EL  P ++   NV+ AA+  G  ++V+  
Sbjct: 52  ASSVIAAARGADVIYHCANPAYTRWE-----ELFPPLME---NVVAAAEANG-AKLVLPG 102

Query: 131 SISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIH 190
           ++    P  G    + ++T +       +RK      +   E+       K  +  + + 
Sbjct: 103 NVYMYGPQAG--SPITEDTPFQPT----TRKGRI---RAEMEERLLAAHAKGDIRALIVR 153

Query: 191 PATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP-------VKDVAKAQVLLFE 243
                GP       A  + L   L      +   + G +        + DVA+A V L E
Sbjct: 154 APDFYGP------GAINSWLGAALFAILQGKTAVFPGNLDTPHEWTYLPDVARALVTLAE 207

Query: 244 SPAASGR 250
            P A G 
Sbjct: 208 EPDAFGE 214

These atypical SDR family members of unknown function have a glycine-rich NAD(P)-binding motif consensus that is very similar to the extended SDRs, GXXGXXG. Generally, this group has poor conservation of the active site tetrad, However, individual sequences do contain matches to the YXXXK active site motif, and generally Tyr or Asn in place of the upstream Ser found in most SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 302

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 47.0 bits (112), Expect = 1e-06
 Identities = 48/195 (24%), Positives = 72/195 (36%), Gaps = 33/195 (16%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           + + GA GFIG  L + LL+  +     T+   +       L       + V E D+ D 
Sbjct: 1   ILILGATGFIGRALARELLEQGH---EVTLLVRNTK----RLSKEDQEPVAVVEGDLRDL 53

Query: 72  GAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS 131
            ++S AV+G   V H+A           +   +    +GT NVLEAAK  GV+  +  SS
Sbjct: 54  DSLSDAVQGVDVVIHLAG----APRDTRDFCEVDV--EGTRNVLEAAKEAGVKHFIFISS 107

Query: 132 ISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFA-EKHGVDVVAIH 190
           + A         +                    P S  LA KA  E    +  +    + 
Sbjct: 108 LGA---YGDLHEETEPS----------------PSSPYLAVKAKTEAVLREASLPYTIVR 148

Query: 191 PATCLGPLMQPYLNA 205
           P    G L +   NA
Sbjct: 149 PGVIYGDLARAIANA 163

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|200381 TIGR04130, FnlA, UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase

 Score = 48.0 bits (114), Expect = 2e-06
 Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 10/134 (7%)

Query: 8   EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEAD 67
           +++ + +TG  G  G  +++  LD +   I   +F   +           ++ L+ +  D
Sbjct: 3   KDKILLITGGTGSFGNAVLRRFLDTDIKEIR--IFSRDEKKQDDMRKKYNNSKLKFYIGD 60

Query: 68  VLDSGAVSRAVEGCKGVFHVAS----PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV 123
           V D  ++  A  G   ++H A+    P     P++  K  +L    GT NVLEAA   GV
Sbjct: 61  VRDYRSILNATRGVDFIYHAAALKQVPSCEFHPMEAVKTNVL----GTENVLEAAIANGV 116

Query: 124 RRVVVTSSISAIVP 137
           +RVV  S+  A+ P
Sbjct: 117 KRVVCLSTDKAVYP 130

The FnlA enzyme is the first step in the biosynthesis of UDP-FucNAc from UDP-GlcNAc in E. coli (along with FnlB and FnlC). The proteins identified by this model include FnlA homologs in the O-antigen clusters of O4, O25, O26, O29 (Shigella D11), O118, O145 and O172 serotype strains, all of which produce O-antigens containing FucNAc (or the further modified FucNAm). A homolog from Pseudomonas aerugiosa serotype O11, WbjB, also involved in the biosynthesis of UDP-FucNAc has been characterized and is now believed to carry out both the initial 4,6-dehydratase reaction and the subsequent epimerization of the resulting methyl group at C-5. A phylogenetic tree of related sequences shows a distinct clade of enzymes involved in the biosynthesis of UDP-QuiNAc (Qui=qinovosamine). This clade appears to be descendant from the common ancestor of the Pseudomonas and E. coli fucose-biosynthesis enzymes. It has been hypothesized that the first step in the biosynthesis of these two compounds may be the same, and thus that these enzymes all have the same function. At present, lacking sufficient confirmation of this, the current model trusted cutoff only covers the tree segment surrounding the E. coli genes. The clades containing the Pseudomonas and QuiNAc biosynthesis enzymes score above the noise cutoff. Immediately below the noise cutoff are enzymes involved in the biosynthesis of UDP-RhaNAc (Rha=rhamnose), which again may or may not produce the same product. Length = 337

>gnl|CDD|187550 cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs

 Score = 47.2 bits (113), Expect = 3e-06
 Identities = 47/196 (23%), Positives = 77/196 (39%), Gaps = 40/196 (20%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            + VTG  G +G+ +V+ L    Y ++   VF  S                   E D+ D
Sbjct: 1   KILVTGHRGLVGSAIVRVLARRGYENV---VFRTSK------------------ELDLTD 39

Query: 71  SGAVSRAVEGCK--GVFHVASPC-----TLEDPVDPEKELILPAVQGTLNVLEAAKRFGV 123
             AV    E  K   V H+A+        +  P D     +   +    NV+ AA RFGV
Sbjct: 40  QEAVRAFFEKEKPDYVIHLAAKVGGIVANMTYPAD----FLRDNLLINDNVIHAAHRFGV 95

Query: 124 RRVVVTSSISAIVPNPGWKGKV-FDETS-WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK 181
           +++V   S S I P+         DE+   T     +   + Y ++K    K    + ++
Sbjct: 96  KKLVFLGS-SCIYPD---LAPQPIDESDLLT--GPPEPTNEGYAIAKRAGLKLCEAYRKQ 149

Query: 182 HGVDVVAIHPATCLGP 197
           +G D +++ P    GP
Sbjct: 150 YGCDYISVMPTNLYGP 165

GDP-fucose synthetase (aka 3, 5-epimerase-4-reductase) acts in the NADP-dependent synthesis of GDP-fucose from GDP-mannose. Two activities have been proposed for the same active site: epimerization and reduction. Proteins in this subgroup are extended SDRs, which have a characteristic active site tetrad and an NADP-binding motif, [AT]GXXGXXG, that is a close match to the archetypical form. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|187581 cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME)-like, extended (e) SDRs

 Score = 47.1 bits (112), Expect = 4e-06
 Identities = 42/200 (21%), Positives = 68/200 (34%), Gaps = 30/200 (15%)

Query: 10  ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFE---A 66
           +   VTGA GFIG+ L + L    +         G+D       P          E    
Sbjct: 1   QRALVTGAGGFIGSHLAERLKAEGHYVR------GADWKS----PEHMTQPTDDDEFHLV 50

Query: 67  DVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELIL-PAVQGTLNVLEAAKRFGVRR 125
           D+ +     +A EG   VFH+A+       +     +I+        N+LEAA+  GV R
Sbjct: 51  DLREMENCLKATEGVDHVFHLAADMGGMGYIQSNHAVIMYNNTLINFNMLEAARINGVER 110

Query: 126 VVVTSS-------ISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEF 178
            +  SS                 +    +E +W         +  Y   K   E+    +
Sbjct: 111 FLFASSACVYPEFKQLETTVVRLR----EEDAWPA-----EPQDAYGWEKLATERLCQHY 161

Query: 179 AEKHGVDVVAIHPATCLGPL 198
            E +G++   +      GP 
Sbjct: 162 NEDYGIETRIVRFHNIYGPR 181

This subgroup of NDP-sugar epimerase/dehydratases are extended SDRs; they have the characteristic active site tetrad, and an NAD-binding motif: TGXXGXX[AG], which is a close match to the canonical NAD-binding motif. Members include Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME) which catalyzes the epimerization of two positions of GDP-alpha-D-mannose to form GDP-beta-L-galactose. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 328

>gnl|CDD|187556 cd05245, SDR_a2, atypical (a) SDRs, subgroup 2

 Score = 46.6 bits (111), Expect = 6e-06
 Identities = 30/124 (24%), Positives = 51/124 (41%), Gaps = 14/124 (11%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           V VTGA G++G  LV  LL   +  + A V        L   P +    + V   D+ D 
Sbjct: 1   VLVTGATGYVGGRLVPRLLQEGH-QVRALV---RSPEKLADRPWSE--RVTVVRGDLEDP 54

Query: 72  GAVSRAVEGCKGVFH-VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
            ++  A+EG    ++ V S  +  D  + ++           N   AA+  GV+R++   
Sbjct: 55  ESLRAALEGIDTAYYLVHSMGSGGDFEEADRRA-------ARNFARAARAAGVKRIIYLG 107

Query: 131 SISA 134
            +  
Sbjct: 108 GLIP 111

This subgroup contains atypical SDRs, one member is identified as Escherichia coli protein ybjT, function unknown. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that generally matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187542 cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcriptional regulator) and triphenylmethane reductase (TMR) like proteins, subgroup 1, atypical (a) SDRs

 Score = 45.8 bits (109), Expect = 9e-06
 Identities = 36/127 (28%), Positives = 52/127 (40%), Gaps = 16/127 (12%)

Query: 14  VTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-SHLFALPGAGDANLRVFEADVLDSG 72
           VTGA G IG+ +  TLL+             SD  +   A  GA      V   D+ D  
Sbjct: 3   VTGATGRIGSKVATTLLEAGR---PVRALVRSDERAAALAARGA-----EVVVGDLDDPA 54

Query: 73  AVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSI 132
            ++ A+ G   VF +A P     P    +   + A +       A +  GV+RVV  SS+
Sbjct: 55  VLAAALAGVDAVFFLAPP----APTADARPGYVQAAE---AFASALREAGVKRVVNLSSV 107

Query: 133 SAIVPNP 139
            A   +P
Sbjct: 108 GADPESP 114

Atypical SDRs related to NMRa, TMR, and HSCARG (an NADPH sensor). This subgroup resembles the SDRs and has a partially conserved characteristic [ST]GXXGXXG NAD-binding motif, but lacks the conserved active site residues. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 259

>gnl|CDD|224014 COG1089, Gmd, GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

 Score = 45.4 bits (108), Expect = 1e-05
 Identities = 30/116 (25%), Positives = 55/116 (47%), Gaps = 9/116 (7%)

Query: 14  VTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS----HLFALPGAGDANLRVFEADVL 69
           +TG  G  G++L + LL+  Y  ++      S  +    HL+  P   D  L +   D+ 
Sbjct: 7   ITGITGQDGSYLAELLLEKGYE-VHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLT 65

Query: 70  DSGAVSRAVEGCKG--VFHVASPCTLEDPVD-PEKELILPAVQGTLNVLEAAKRFG 122
           DS  + R +E  +   ++++A+   +    + PE    + A+ GTL +LEA +  G
Sbjct: 66  DSSNLLRILEEVQPDEIYNLAAQSHVGVSFEQPEYTADVDAI-GTLRLLEAIRILG 120

Length = 345

>gnl|CDD|178263 PLN02657, PLN02657, 3,8-divinyl protochlorophyllide a 8-vinyl reductase

 Score = 45.1 bits (107), Expect = 2e-05
 Identities = 36/140 (25%), Positives = 57/140 (40%), Gaps = 14/140 (10%)

Query: 6   EKEEETVCVTGANGFIGTWLVKTLLDNNYTSI----NATVFPGSDSS--HLFALPGAGDA 59
           E ++ TV V GA G+IG ++V+ L+   Y  +      +   G +        LPGA   
Sbjct: 57  EPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGA--- 113

Query: 60  NLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAK 119
              V   DV D+ ++ + +        V   C L       K+      Q T N L+A +
Sbjct: 114 --EVVFGDVTDADSLRKVLFSEGDPVDVVVSC-LASRTGGVKDSWKIDYQATKNSLDAGR 170

Query: 120 RFGVRRVVVTSSISAIVPNP 139
             G +  V+ S+I   V  P
Sbjct: 171 EVGAKHFVLLSAIC--VQKP 188

Length = 390

>gnl|CDD|187580 cd05272, TDH_SDR_e, L-threonine dehydrogenase, extended (e) SDRs

 Score = 45.0 bits (107), Expect = 2e-05
 Identities = 49/183 (26%), Positives = 69/183 (37%), Gaps = 31/183 (16%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFE-ADVLD 70
           + +TG  G IG+ L K LL   Y   N      SD       P A       FE  DVLD
Sbjct: 2   ILITGGLGQIGSELAK-LLRKRYGKDNVIA---SD----IRKPPAHVVLSGPFEYLDVLD 53

Query: 71  SGAVSRAVE--GCKGVFHVAS--PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRV 126
             ++   V       + H+A+      E       ++    + G  NVLE A+   + R+
Sbjct: 54  FKSLEEIVVNHKITWIIHLAALLSAVGEKNPPLAWDV---NMNGLHNVLELAREHNL-RI 109

Query: 127 VVTSSISAIVPNPGWKGKVFDETSWTDL--EYCKSR-KKWYPVSKTLAEKAAWEFAEKHG 183
            V S+I A           F  T+  +   +    R +  Y VSK  AE     +  K G
Sbjct: 110 FVPSTIGA-----------FGPTTPRNNTPDDTIQRPRTIYGVSKVAAELLGEYYHHKFG 158

Query: 184 VDV 186
           VD 
Sbjct: 159 VDF 161

This subgroup contains members identified as L-threonine dehydrogenase (TDH). TDH catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. This group is distinct from TDHs that are members of the medium chain dehydrogenase/reductase family. This group has the NAD-binding motif and active site tetrad of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 308

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 44.6 bits (106), Expect = 2e-05
 Identities = 49/202 (24%), Positives = 73/202 (36%), Gaps = 47/202 (23%)

Query: 14  VTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGA 73
           +TGA+  IG  LV+ LL     ++ AT    S ++ L AL GA  + L + E DV D  A
Sbjct: 3   ITGASRGIGLELVRQLLARGNNTVIATCRDPSAATELAAL-GASHSRLHILELDVTDEIA 61

Query: 74  VS----RAVEGCKG---VFH---VASPCTLEDPVDPEKELILPAVQ--GTLNVLEAAK-- 119
            S        G  G   + +   +         VD E  L +  V   G L + +A    
Sbjct: 62  ESAEAVAERLGDAGLDVLINNAGILHSYGPASEVDSEDLLEVFQVNVLGPLLLTQAFLPL 121

Query: 120 -RFGVRRVVVT-----SSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKT---- 169
              G R  ++       SI        +                      Y  SK     
Sbjct: 122 LLKGARAKIINISSRVGSIGDNTSGGWYS---------------------YRASKAALNM 160

Query: 170 LAEKAAWEFAEKHGVDVVAIHP 191
           L +  A E  ++ G+ VV++HP
Sbjct: 161 LTKSLAVEL-KRDGITVVSLHP 181

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 45.1 bits (107), Expect = 2e-05
 Identities = 38/151 (25%), Positives = 54/151 (35%), Gaps = 18/151 (11%)

Query: 7   KEEETVCVTGANGFIGTWLVKTLLDN---NYTSINATVFPGSDSSHLFALPGAGD--ANL 61
           K      VTG  G IG  L + L          +  +  P  +      L       A +
Sbjct: 203 KPGGVYLVTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAALEALGARV 262

Query: 62  RVFEADVLDSGAVSRAVEGCK-------GVFHVA---SPCTLEDPVDPE--KELILPAVQ 109
               ADV D+ AV R +E  +       GV H A       L      E  + ++ P V 
Sbjct: 263 LYISADVTDAAAVRRLLEKVRERYGAIDGVIHAAGVLRDALLAQ-KTAEDFEAVLAPKVD 321

Query: 110 GTLNVLEAAKRFGVRRVVVTSSISAIVPNPG 140
           G LN+ +A     +   V+ SS+SA     G
Sbjct: 322 GLLNLAQALADEPLDFFVLFSSVSAFFGGAG 352

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 44.4 bits (106), Expect = 2e-05
 Identities = 40/152 (26%), Positives = 56/152 (36%), Gaps = 28/152 (18%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPG---AGDANLRVFEAD 67
           T  VTGA+  IG  +   L  +    +       S+     AL     A     RV   D
Sbjct: 7   TALVTGASRGIGRAIALRLAADGAKVVIY----DSNEEAAEALAAELRAAGGEARVLVFD 62

Query: 68  VLDSGAVSRAVE-------GCKGVFHVA---SPCTLEDPVDPE--KELILPAVQGTLNVL 115
           V D  AV   +E           + + A       L   +  E    +I   + GT NV+
Sbjct: 63  VSDEAAVRALIEAAVEAFGALDILVNNAGITRDALLPR-MSEEDWDRVIDVNLTGTFNVV 121

Query: 116 EAA------KRFGVRRVVVTSSISAIVPNPGW 141
            AA       R+G  R+V  SS+S +  NPG 
Sbjct: 122 RAALPPMIKARYG--RIVNISSVSGVTGNPGQ 151

Length = 246

>gnl|CDD|187672 cd09812, 3b-HSD_like_1_SDR_e, 3beta-hydroxysteroid dehydrogenase (3b-HSD)-like, subgroup1, extended (e) SDRs

 Score = 44.8 bits (106), Expect = 2e-05
 Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 11/126 (8%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
           +V +TG  G+ G  L   L  +    I   +           LP      ++  +ADV D
Sbjct: 1   SVLITGGGGYFGFRLGCALAKSGVHVILFDI-----RRPQQELP----EGIKFIQADVRD 51

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPA-VQGTLNVLEAAKRFGVRRVVVT 129
              + +AV G   VFH+AS   +       +ELI    V+GT N+++   R  V R++ T
Sbjct: 52  LSQLEKAVAGVDCVFHIAS-YGMSGREQLNRELIEEINVRGTENIIQVCVRRRVPRLIYT 110

Query: 130 SSISAI 135
           S+ + I
Sbjct: 111 STFNVI 116

An uncharacterized subgroup of the 3b-HSD-like extended-SDR family. Proteins in this subgroup have the characteristic active site tetrad and NAD(P)-binding motif of extended-SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 339

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 43.3 bits (103), Expect = 3e-05
 Identities = 38/154 (24%), Positives = 61/154 (39%), Gaps = 33/154 (21%)

Query: 11  TVCVTGANGFIGT----WLVK------TLLDNNYTSINATVFPGSDSSHLFA-LPGAGDA 59
           TV +TG  G +G     WL         L+            P   ++ L A L   G A
Sbjct: 2   TVLITGGTGGLGLALARWLAAEGARHLVLVSRR--------GPAPGAAELVAELEALG-A 52

Query: 60  NLRVFEADVLDSGAVSRAVEGCK-------GVFH---VASPCTLEDPVDPE--KELILPA 107
            + V   DV D  A++  +           GV H   V     LE+ + PE  + ++ P 
Sbjct: 53  EVTVAACDVADRDALAALLAALPAALGPLDGVVHNAGVLDDGPLEE-LTPERFERVLAPK 111

Query: 108 VQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGW 141
           V G  N+ E  +   +   V+ SS++ ++ +PG 
Sbjct: 112 VTGAWNLHELTRDLDLGAFVLFSSVAGVLGSPGQ 145

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 43.2 bits (103), Expect = 3e-05
 Identities = 37/151 (24%), Positives = 57/151 (37%), Gaps = 28/151 (18%)

Query: 11  TVCVTGANGFIG----TWLVKT-----LLDNNYTSINATVFPGSDSSHLFALPGAGDANL 61
           T  +TG  G +G     WL +      +L     S +    PG+    L A   A  A +
Sbjct: 2   TYLITGGLGGLGRALARWLAERGARRLVL----LSRSGPDAPGAA--ALLAELEAAGARV 55

Query: 62  RVFEADVLDSGAVSRAVEGC-------KGVFH---VASPCTLEDPVDPE--KELILPAVQ 109
            V   DV D  A++  +           GV H   V     L   + PE    ++ P   
Sbjct: 56  TVVACDVADRDALAAVLAAIPAVEGPLTGVIHAAGVLDDGVLAS-LTPERFAAVLAPKAA 114

Query: 110 GTLNVLEAAKRFGVRRVVVTSSISAIVPNPG 140
           G  N+ E      +   V+ SSI+ ++ +PG
Sbjct: 115 GAWNLHELTADLPLDFFVLFSSIAGVLGSPG 145

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 43.5 bits (103), Expect = 4e-05
 Identities = 48/198 (24%), Positives = 81/198 (40%), Gaps = 34/198 (17%)

Query: 8   EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEAD 67
           +++TV VTGAN  IG   V++LL +    + A V     ++HL A  G     LR+   D
Sbjct: 2   KDKTVLVTGANRGIGKAFVESLLAHGAKKVYAAVRDPGSAAHLVAKYGDKVVPLRL---D 58

Query: 68  VLDSGAVSRAVEGCK---------GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEA- 117
           V D  ++  A    K         GV   A+          ++E+ +  V G L + +A 
Sbjct: 59  VTDPESIKAAAAQAKDVDVVINNAGVLKPATLLEEGALEALKQEMDV-NVFGLLRLAQAF 117

Query: 118 ---AKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKA 174
               K  G   +V  +S++++   P                Y  S+   Y +++ L    
Sbjct: 118 APVLKANGGGAIVNLNSVASLKNFPAMGT------------YSASKSAAYSLTQGLRA-- 163

Query: 175 AWEFAEKHGVDVVAIHPA 192
             E A + G  V+++HP 
Sbjct: 164 --ELAAQ-GTLVLSVHPG 178

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score = 43.4 bits (103), Expect = 4e-05
 Identities = 57/261 (21%), Positives = 88/261 (33%), Gaps = 57/261 (21%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
              VTGA   IG  +   L  +    I   +     ++    +  AG    R  + DV D
Sbjct: 8   VALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGG-KARARQVDVRD 66

Query: 71  SGAVSRAVE-------GCKGVFH---VASPCTLEDPVDPE--KELILPAVQGTLNVLEAA 118
             A+  AV            +     +       + +D E  + +I   + GT  + +AA
Sbjct: 67  RAALKAAVAAGVEDFGRLDILVANAGIFPLTPFAE-MDDEQWERVIDVNLTGTFLLTQAA 125

Query: 119 ----KRFGVRRVVVTSSISA-IVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEK 173
                R G  R+V+TSS++   V  PG               Y  S  K   V  T A  
Sbjct: 126 LPALIRAGGGRIVLTSSVAGPRVGYPGLAH------------YAAS--KAGLVGFTRA-- 169

Query: 174 AAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVK- 232
            A E A    + V ++HP     P+     +A     + +              A+P+  
Sbjct: 170 LALELAA-RNITVNSVHPGGVDTPMAGNLGDAQ--WAEAIAA------------AIPLGR 214

Query: 233 -----DVAKAQVLLFESPAAS 248
                D+A A VL   S  A 
Sbjct: 215 LGEPEDIAAA-VLFLASDEAR 234

Length = 251

>gnl|CDD|132628 TIGR03589, PseB, UDP-N-acetylglucosamine 4,6-dehydratase

 Score = 42.8 bits (101), Expect = 1e-04
 Identities = 39/136 (28%), Positives = 56/136 (41%), Gaps = 19/136 (13%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFP-----GSDSSHLFALPGAGDANLRVFE 65
           ++ +TG  G  G   +  LL  NY      ++        +    F  P      LR F 
Sbjct: 6   SILITGGTGSFGKAFISRLL-ENYNPKKIIIYSRDELKQWEMQQKFPAP-----CLRFFI 59

Query: 66  ADVLDSGAVSRAVEGCKGVFHVAS----PCTLEDPVDPEKELILPAVQGTLNVLEAAKRF 121
            DV D   ++RA+ G   V H A+    P    +P     E I   + G  NV++AA   
Sbjct: 60  GDVRDKERLTRALRGVDYVVHAAALKQVPAAEYNPF----ECIRTNINGAQNVIDAAIDN 115

Query: 122 GVRRVVVTSSISAIVP 137
           GV+RVV  S+  A  P
Sbjct: 116 GVKRVVALSTDKAANP 131

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. Length = 324

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score = 42.1 bits (99), Expect = 1e-04
 Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 2/70 (2%)

Query: 10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSH-LFALPGAGDANLRVFEADV 68
          +   VTGA   IG+ + + LL++ Y  I AT F G+D +   F   G  +  +R+ E DV
Sbjct: 3  KIALVTGAKRGIGSAIARELLNDGYRVI-ATYFSGNDCAKDWFEEYGFTEDQVRLKELDV 61

Query: 69 LDSGAVSRAV 78
           D+   + A+
Sbjct: 62 TDTEECAEAL 71

Length = 245

>gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein

 Score = 42.2 bits (100), Expect = 1e-04
 Identities = 36/186 (19%), Positives = 60/186 (32%), Gaps = 37/186 (19%)

Query: 14  VTGANGFIGTWLVKTLLDNNYTSINATVF----PGSDSS-----------HLFALPGAGD 58
           +TGA GF+G  L++ LL    ++    ++         S           +         
Sbjct: 1   LTGATGFLGKVLLEKLLR---STPEVKIYCLVRAKDGESALERLRQELLKYGLFDRLKAL 57

Query: 59  ANLRVFEADV------LDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTL 112
             +     D+      L         E    + H A+       V+P  +L    V GT 
Sbjct: 58  ERIIPVAGDLSEPNLGLSDEDFQELAEEVDVIIHNAATVNF---VEPYSDLRATNVLGTR 114

Query: 113 NVLEAAKRFGVRRVV-VTSSISAIVPNPGWKGKVFDETSWTDLEYC-KSRKKW---YPVS 167
            VL  AK+        V+++        G +G + +E  +   E            Y  S
Sbjct: 115 EVLRLAKQMKKLPFHHVSTAYVN-----GERGGLLEEKPYKLDEDEPALLGGLPNGYTQS 169

Query: 168 KTLAEK 173
           K LAE+
Sbjct: 170 KWLAEQ 175

This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 42.6 bits (101), Expect = 1e-04
 Identities = 37/134 (27%), Positives = 54/134 (40%), Gaps = 23/134 (17%)

Query: 14  VTGANGFIGTWLVKTLLDNNYTS-INATVFPGS-----------DSSHLFALPG-AGDAN 60
           VTG  GFIG  LV  LLD    + ++  V   S            +  +  L G   +  
Sbjct: 5   VTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPG 64

Query: 61  LRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKR 120
           L + EAD+ + G +         V H+A+   + D    E+      V GT NV+E A+R
Sbjct: 65  LGLSEADIAELGDIDH-------VVHLAA---IYDLTADEEAQRAANVDGTRNVVELAER 114

Query: 121 FGVRRVVVTSSISA 134
                    SSI+ 
Sbjct: 115 LQAATFHHVSSIAV 128

Length = 657

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score = 41.7 bits (98), Expect = 2e-04
 Identities = 44/209 (21%), Positives = 71/209 (33%), Gaps = 43/209 (20%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           V +TG  G +G      L       +       +  S    LPG     LR+   D++D 
Sbjct: 10  VAITGGFGGLGRATAAWLA-ARGARVALIGRGAAPLSQ--TLPGVPADALRIGGIDLVDP 66

Query: 72  GAVSRAVE-------GCKGVFHVA---SPCTLEDPVDPEKELILPA-VQGTLNVLEAA-- 118
            A  RAV+           + ++A      T+ D      + +    V+ TLN  +AA  
Sbjct: 67  QAARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALP 126

Query: 119 --KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKT----LAE 172
                G  R+V   + +A+   PG                       Y  +K     L E
Sbjct: 127 ALTASGGGRIVNIGAGAALKAGPGMGA--------------------YAAAKAGVARLTE 166

Query: 173 KAAWEFAEKHGVDVVAIHPATCLGPLMQP 201
             A E  ++ G+ V A+ P+    P  + 
Sbjct: 167 ALAAELLDR-GITVNAVLPSIIDTPPNRA 194

Length = 239

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score = 41.3 bits (97), Expect = 2e-04
 Identities = 56/267 (20%), Positives = 87/267 (32%), Gaps = 52/267 (19%)

Query: 14  VTGANGFIGTWLVKTLLDNNYTS-INATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDS 71
           VTGA+  IG  + + L        + A       +  L A +  AG        ADV D 
Sbjct: 10  VTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDD 69

Query: 72  -GAVSRAVEGCK-------------GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEA 117
             +V   V   +             G+    +P       D ++ + +  +   L    A
Sbjct: 70  EESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAA 129

Query: 118 AKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK----TLAEK 173
                 +R+V  SS++ +   PG                       Y  SK     L + 
Sbjct: 130 LPLMKKQRIVNISSVAGLGGPPGQAA--------------------YAASKAALIGLTKA 169

Query: 174 AAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG-AVPVK 232
            A E A   G+ V A+ P     P+     +A    L++L            LG     +
Sbjct: 170 LALELA-PRGIRVNAVAPGYIDTPMTAALESAELEALKRLAAR-------IPLGRLGTPE 221

Query: 233 DVAKAQVLLFESPAAS---GRYLCTNG 256
           +VA A   L    AAS   G+ L  +G
Sbjct: 222 EVAAAVAFLASDEAASYITGQTLPVDG 248

Length = 251

>gnl|CDD|187557 cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs

 Score = 41.8 bits (99), Expect = 2e-04
 Identities = 54/184 (29%), Positives = 78/184 (42%), Gaps = 25/184 (13%)

Query: 14  VTGANGFIGTWLVKTLLDN--NYTSINA-TVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
           VTG  GFIG+  V+ LL+   +Y  IN   +    +  +L  +  +     R  + D+ D
Sbjct: 5   VTGGAGFIGSNFVRYLLNKYPDYKIINLDKLTYAGNLENLEDV--SSSPRYRFVKGDICD 62

Query: 71  SGAVSRAVEGCK--GVFHVASPCTLEDPVD-----PEKELILPAVQGTLNVLEAAKRFGV 123
           +  V R  E  K   V H A+    E  VD     PE   I   V GT  +LEAA+++GV
Sbjct: 63  AELVDRLFEEEKIDAVIHFAA----ESHVDRSISDPE-PFIRTNVLGTYTLLEAARKYGV 117

Query: 124 RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHG 183
           +R V  S+    V         F ETS        +    Y  SK  A+     +   +G
Sbjct: 118 KRFVHISTDE--VYGDLLDDGEFTETS----PLAPTSP--YSASKAAADLLVRAYHRTYG 169

Query: 184 VDVV 187
           + VV
Sbjct: 170 LPVV 173

This subgroup contains dTDP-D-glucose 4,6-dehydratase and related proteins, members of the extended-SDR family, with the characteristic Rossmann fold core region, active site tetrad and NAD(P)-binding motif. dTDP-D-glucose 4,6-dehydratase is closely related to other sugar epimerases of the SDR family. dTDP-D-dlucose 4,6,-dehydratase catalyzes the second of four steps in the dTDP-L-rhamnose pathway (the dehydration of dTDP-D-glucose to dTDP-4-keto-6-deoxy-D-glucose) in the synthesis of L-rhamnose, a cell wall component of some pathogenic bacteria. In many gram negative bacteria, L-rhamnose is an important constituent of lipopoylsaccharide O-antigen. The larger N-terminal portion of dTDP-D-Glucose 4,6-dehydratase forms a Rossmann fold NAD-binding domain, while the C-terminus binds the sugar substrate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 315

>gnl|CDD|187570 cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase, extended (e) SDRs

 Score = 41.0 bits (97), Expect = 3e-04
 Identities = 31/135 (22%), Positives = 55/135 (40%), Gaps = 18/135 (13%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS----HLFALPGAGDANLRVFEA 66
              +TG  G  G++L + LL+  Y          S ++    HL+         + +   
Sbjct: 1   RALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTDRIDHLY----INKDRITLHYG 56

Query: 67  DVLDSGAVSRAVEGCKG--VFHVA----SPCTLEDPVDPEKELILPAVQGTLNVLEAAKR 120
           D+ DS ++ RA+E  +   ++H+A       + +DP             GTLN+LEA + 
Sbjct: 57  DLTDSSSLRRAIEKVRPDEIYHLAAQSHVKVSFDDPE----YTAEVNAVGTLNLLEAIRI 112

Query: 121 FGVRRVVVTSSISAI 135
            G+      +S S  
Sbjct: 113 LGLDARFYQASSSEE 127

GDP-mannose 4,6 dehydratase, a homodimeric SDR, catalyzes the NADP(H)-dependent conversion of GDP-(D)-mannose to GDP-4-keto, 6-deoxy-(D)-mannose in the fucose biosynthesis pathway. These proteins have the canonical active site triad and NAD-binding pattern, however the active site Asn is often missing and may be substituted with Asp. A Glu residue has been identified as an important active site base. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|233954 TIGR02622, CDP_4_6_dhtase, CDP-glucose 4,6-dehydratase

 Score = 41.1 bits (97), Expect = 3e-04
 Identities = 37/129 (28%), Positives = 55/129 (42%), Gaps = 22/129 (17%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVF-----PGSDSSHLFALPGAGDANLRVFE 65
            V VTG  GF G+WL   L       + A V+     P +  +    L  A         
Sbjct: 6   KVLVTGHTGFKGSWLSLWL-----LELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHF-- 58

Query: 66  ADVLDSGAVSRAVEGCKG--VFHVAS-PC---TLEDPVDPEKELILPAVQGTLNVLEAAK 119
            D+ D+  + +A+   K   VFH+A+ P    +  DP+    E     V GT+N+LEA +
Sbjct: 59  GDIRDAAKLRKAIAEFKPEIVFHLAAQPLVRKSYADPL----ETFETNVMGTVNLLEAIR 114

Query: 120 RFGVRRVVV 128
             G  + VV
Sbjct: 115 AIGSVKAVV 123

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 349

>gnl|CDD|235630 PRK05865, PRK05865, hypothetical protein; Provisional

 Score = 41.6 bits (97), Expect = 4e-04
 Identities = 34/120 (28%), Positives = 48/120 (40%), Gaps = 19/120 (15%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           + VTGA+G +G  L   LL   +  +      G       + P + D       AD+ D+
Sbjct: 3   IAVTGASGVLGRGLTARLLSQGHEVV------GIARHRPDSWPSSAD----FIAADIRDA 52

Query: 72  GAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS 131
            AV  A+ G   V H A              +    + GT NVL+A    G  R+V TSS
Sbjct: 53  TAVESAMTGADVVAHCAW------VRGRNDHI---NIDGTANVLKAMAETGTGRIVFTSS 103

Length = 854

>gnl|CDD|225857 COG3320, COG3320, Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

 Score = 41.2 bits (97), Expect = 4e-04
 Identities = 51/203 (25%), Positives = 69/203 (33%), Gaps = 20/203 (9%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDA----------N 60
            V +TGA GF+G +L+  LLD +   +   V   SD + L  L    D            
Sbjct: 2   NVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADR 61

Query: 61  LRVFEADV------LDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNV 114
           + V   D+      L         E    + H A+   L + V P  EL    V GT  V
Sbjct: 62  VEVVAGDLAEPDLGLSERTWQELAENVDLIIHNAA---LVNHVFPYSELRGANVLGTAEV 118

Query: 115 LEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKA 174
           L  A     + +   SSIS           V  +         +     Y  SK +AEK 
Sbjct: 119 LRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKL 178

Query: 175 AWEFAEKHGVDVVAIHPATCLGP 197
             E A   G+ V    P    G 
Sbjct: 179 VRE-AGDRGLPVTIFRPGYITGD 200

Length = 382

>gnl|CDD|165812 PLN02166, PLN02166, dTDP-glucose 4,6-dehydratase

 Score = 41.1 bits (96), Expect = 4e-04
 Identities = 55/201 (27%), Positives = 83/201 (41%), Gaps = 38/201 (18%)

Query: 12  VCVTGANGFIGTWLVKTLL---------DNNYTSINATVFPGSDSSHLFALPGAGDANLR 62
           + VTG  GF+G+ LV  L+         DN +T     +       HLF     G+    
Sbjct: 123 IVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLV------HLF-----GNPRFE 171

Query: 63  VFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPV----DPEKELILPAVQGTLNVLEAA 118
           +   DV++   +         ++H+A P +   PV    +P K  I   V GTLN+L  A
Sbjct: 172 LIRHDVVEPILLE-----VDQIYHLACPAS---PVHYKYNPVKT-IKTNVMGTLNMLGLA 222

Query: 119 KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEF 178
           KR G R ++  +S S +  +P    +   ET W ++     R   Y   K  AE  A ++
Sbjct: 223 KRVGARFLL--TSTSEVYGDPLEHPQ--KETYWGNVNPIGER-SCYDEGKRTAETLAMDY 277

Query: 179 AEKHGVDVVAIHPATCLGPLM 199
               GV+V         GP M
Sbjct: 278 HRGAGVEVRIARIFNTYGPRM 298

Length = 436

>gnl|CDD|187563 cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimerase, extended (e) SDRs

 Score = 40.0 bits (94), Expect = 7e-04
 Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 17/134 (12%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYT-----SINATVFPGSDSSHLFALPGAGDANLRVFE 65
            + VTGA GFIG  + K LL+         ++N         + L  L  +G    +  +
Sbjct: 2   KILVTGAAGFIGFHVAKRLLERGDEVVGIDNLNDYYDVRLKEARLELLGKSGGF--KFVK 59

Query: 66  ADVLDSGAVSRAVEGCK--GVFHVASPC----TLEDPVDPEKELILPAVQGTLNVLEAAK 119
            D+ D  A+ R  +  +   V H+A+      +LE+P       +   + G LN+LE  +
Sbjct: 60  GDLEDREALRRLFKDHEFDAVIHLAAQAGVRYSLENP----HAYVDSNIVGFLNLLELCR 115

Query: 120 RFGVRRVVVTSSIS 133
            FGV+ +V  SS S
Sbjct: 116 HFGVKHLVYASSSS 129

This subgroup contains UDP-D-glucuronic acid 4-epimerase, an extended SDR, which catalyzes the conversion of UDP-alpha-D-glucuronic acid to UDP-alpha-D-galacturonic acid. This group has the SDR's canonical catalytic tetrad and the TGxxGxxG NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 332

>gnl|CDD|177856 PLN02206, PLN02206, UDP-glucuronate decarboxylase

 Score = 40.3 bits (94), Expect = 7e-04
 Identities = 56/201 (27%), Positives = 82/201 (40%), Gaps = 38/201 (18%)

Query: 12  VCVTGANGFIGTWLVKTLL---------DNNYTSINATVFPGSDSSHLFALPGAGDANLR 62
           V VTG  GF+G+ LV  L+         DN +T     V       H F+ P     N  
Sbjct: 122 VVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVM------HHFSNP-----NFE 170

Query: 63  VFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPV----DPEKELILPAVQGTLNVLEAA 118
           +   DV++   +         ++H+A P +   PV    +P K  I   V GTLN+L  A
Sbjct: 171 LIRHDVVEPILLE-----VDQIYHLACPAS---PVHYKFNPVKT-IKTNVVGTLNMLGLA 221

Query: 119 KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEF 178
           KR G R ++  +S S +  +P    +V  ET W ++     R   Y   K  AE    ++
Sbjct: 222 KRVGARFLL--TSTSEVYGDPLQHPQV--ETYWGNVNPIGVR-SCYDEGKRTAETLTMDY 276

Query: 179 AEKHGVDVVAIHPATCLGPLM 199
                V+V         GP M
Sbjct: 277 HRGANVEVRIARIFNTYGPRM 297

Length = 442

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score = 39.6 bits (93), Expect = 8e-04
 Identities = 45/215 (20%), Positives = 69/215 (32%), Gaps = 54/215 (25%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNY----TSINATVFPGSDSSHLFALPGAGDANLRVFEAD 67
             VTGA+  IG  + + L            N       ++    A   A   N    +AD
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADRNE------EALAELAAIEALGGNAVAVQAD 54

Query: 68  VLDSGAVSRAVEGCK-------GVFH---VASPCTLEDPVDPEKEL-------ILPAVQG 110
           V D   V   VE           + +   +A P  LE+    +++        +      
Sbjct: 55  VSDEEDVEALVEEALEEFGRLDILVNNAGIARPGPLEE--LTDEDWDRVLDVNLTGVFLL 112

Query: 111 TLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK-- 168
           T   L   K+ G  R+V  SS++ + P PG               Y          SK  
Sbjct: 113 TRAALPHMKKQGGGRIVNISSVAGLRPLPGQ------------AAYA--------ASKAA 152

Query: 169 --TLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQP 201
              L    A E A  +G+ V A+ P     P++  
Sbjct: 153 LEGLTRSLALELA-PYGIRVNAVAPGLVDTPMLAK 186

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|187651 cd08947, NmrA_TMR_like_SDR_a, NmrA (a transcriptional regulator), HSCARG (an NADPH sensor), and triphenylmethane reductase (TMR) like proteins, atypical (a) SDRs

 Score = 39.5 bits (92), Expect = 0.001
 Identities = 48/235 (20%), Positives = 76/235 (32%), Gaps = 30/235 (12%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           + VTGA G  G  +++ LL    + + A V     ++ L A  G       V + D    
Sbjct: 1   IAVTGATGQQGGSVIRHLLAKGASQVRAVVRNVEKAATL-ADQGV-----EVRQGDYNQP 54

Query: 72  GAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS 131
             + +A  G   +F +        P       I    QG  NV +AA+R GV+ +  T  
Sbjct: 55  ELLQKAFAGASKLFIITG------PHYDNTLEI---KQGK-NVADAARRAGVKHIYSTGY 104

Query: 132 ISAIVPNPG-WKGKVFDETSWTD--LEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVA 188
             A          K+  E +     + Y   R   Y       E    E          A
Sbjct: 105 AFAEESAIPLAHVKLAVEYAIRTTGIPYTFLRNGLY------TENFVSEGLPAADTGSGA 158

Query: 189 IHPATCLGPLMQPYLNAS---CAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVL 240
           I      GP+  P +  +    A  Q L +   + +  + +          A  L
Sbjct: 159 IVLPAGDGPV--PSVTRNDLGPAAAQLLKEEGHEGKTINLVSNCRWTPDELAAAL 211

Atypical SDRs belonging to this subgroup include NmrA, HSCARG, and TMR, these proteins bind NAD(P) but they lack the usual catalytic residues of the SDRs. Atypical SDRs are distinct from classical SDRs. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. TMR, an NADP-binding protein, lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 224

>gnl|CDD|177883 PLN02240, PLN02240, UDP-glucose 4-epimerase

 Score = 39.2 bits (92), Expect = 0.001
 Identities = 34/135 (25%), Positives = 54/135 (40%), Gaps = 11/135 (8%)

Query: 5   AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS------HLFALPGAGD 58
                 T+ VTG  G+IG+  V  LL   Y      V    D+S       +  L G   
Sbjct: 1   MSLMGRTILVTGGAGYIGSHTVLQLLLAGYK---VVVIDNLDNSSEEALRRVKELAGDLG 57

Query: 59  ANLRVFEADVLDSGAVSRAVEGCK--GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLE 116
            NL   + D+ D  A+ +     +   V H A    + + V          + GT+N+LE
Sbjct: 58  DNLVFHKVDLRDKEALEKVFASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLE 117

Query: 117 AAKRFGVRRVVVTSS 131
              + G +++V +SS
Sbjct: 118 VMAKHGCKKLVFSSS 132

Length = 352

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 38.8 bits (91), Expect = 0.002
 Identities = 23/93 (24%), Positives = 36/93 (38%), Gaps = 12/93 (12%)

Query: 8  EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGA-----GDANLR 62
          + +T+ +TGA G IG+ LVK +L+     I A +    D   L  L  +         L 
Sbjct: 3  KGKTILITGAGGLIGSALVKAILEAGGIVIAADI----DKEALNELLESLGKEFKSKKLS 58

Query: 63 VFEADVLDSGAVSRA---VEGCKGVFHVASPCT 92
          + E D+ D  ++           G    A  C 
Sbjct: 59 LVELDITDQESLEEFLSKSAEKYGKIDGAVNCA 91

Length = 256

>gnl|CDD|187572 cd05262, SDR_a7, atypical (a) SDRs, subgroup 7

 Score = 38.9 bits (91), Expect = 0.002
 Identities = 57/268 (21%), Positives = 89/268 (33%), Gaps = 42/268 (15%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           V VTGA GFIG+ +V+ L+   +  +          +      GA     +V   D+ D 
Sbjct: 3   VFVTGATGFIGSAVVRELVAAGHEVVGLARSD--AGAAKLEAAGA-----QVHRGDLEDL 55

Query: 72  GAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS 131
             + +A      V H+A      D      E+   A++     L        + ++ TS 
Sbjct: 56  DILRKAAAEADAVIHLAFTHDF-DNFAQACEVDRRAIEALGEALRGTG----KPLIYTSG 110

Query: 132 ISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDV-VAIH 190
           I  + P         +E      +          VS    E AA E AE+ GV   V   
Sbjct: 111 IWLLGP-----TGGQEEDEEAPDD--PPTPAARAVS----EAAALELAER-GVRASVVRL 158

Query: 191 PATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG-------AVPVKDVAKAQVLLFE 243
           P    G             +  L+  +++     ++G       AV   D A+   L  E
Sbjct: 159 PPVVHGR-------GDHGFVPMLIAIAREKGVSAYVGDGKNRWPAVHRDDAARLYRLALE 211

Query: 244 SPAASGRYLCT--NGIYQFGDFAERVSK 269
              A   Y      GI    D AE + +
Sbjct: 212 KGKAGSVYHAVAEEGI-PVKDIAEAIGR 238

This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 291

>gnl|CDD|233557 TIGR01746, Thioester-redct, thioester reductase domain

 Score = 38.5 bits (90), Expect = 0.002
 Identities = 62/264 (23%), Positives = 87/264 (32%), Gaps = 36/264 (13%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFALPGAGDA---------- 59
           TV +TGA GF+G +L++ LL  +    +   V   S+   +  L  A  +          
Sbjct: 1   TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWHEDLAR 60

Query: 60  -NLRVFEADV------LDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTL 112
             + V   D+      L      R  E    + H  +   L + V P  EL    V GT 
Sbjct: 61  ERIEVVAGDLSEPRLGLSDAEWERLAENVDTIVHNGA---LVNWVYPYSELRGANVLGTR 117

Query: 113 NVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAE 172
            VL  A     + +   S+IS             D+ + T           Y  SK +AE
Sbjct: 118 EVLRLAASGRAKPLHYVSTISVGAAIDL-STVTEDDATVTPPPGLAGG---YAQSKWVAE 173

Query: 173 KAAWEFAEKHGVDVVAIHPATCLGP------LMQPYL-NASCAVLQQLLQGSKDTQEYHW 225
               E A   G+ V  + P   LG            L       L               
Sbjct: 174 LLVRE-ASDRGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAYPQSPELTEDL 232

Query: 226 LGAVPVKDVAKAQVLLFESPAASG 249
               PV  VA+A V+L   PAAS 
Sbjct: 233 ---TPVDFVARAIVVLSSRPAASA 253

This model includes the terminal domain from the fungal alpha aminoadipate reductase enzyme (also known as aminoadipate semialdehyde dehydrogenase) which is involved in the biosynthesis of lysine , as well as the reductase-containing component of the myxochelin biosynthetic gene cluster, MxcG. The mechanism of reduction involves activation of the substrate by adenylation and transfer to a covalently-linked pantetheine cofactor as a thioester. This thioester is then reduced to give an aldehyde (thus releasing the product) and a regenerated pantetheine thiol. (In myxochelin biosynthesis this aldehyde is further reduced to an alcohol or converted to an amine by an aminotransferase.) This is a fundamentally different reaction than beta-ketoreductase domains of polyketide synthases which act at a carbonyl two carbons removed from the thioester and forms an alcohol as a product. This domain is invariably found at the C-terminus of the proteins which contain it (presumably because it results in the release of the product). The majority of hits to this model are non-ribosomal peptide synthetases in which this domain is similarly located proximal to a thiolation domain (pfam00550). In some cases this domain is found at the end of a polyketide synthetase enzyme, but is unlike ketoreductase domains which are found before the thiolase domains. Exceptions to this observed relationship with the thiolase domain include three proteins which consist of stand-alone reductase domains (GP|466833 from M. leprae, GP|435954 from Anabaena and OMNI|NTL02SC1199 from Strep. coelicolor) and one protein (OMNI|NTL01NS2636 from Nostoc) which contains N-terminal homology with a small group of hypothetical proteins but no evidence of a thiolation domain next to the putative reductase domain. Below the noise cutoff to this model are proteins containing more distantly related ketoreductase and dehydratase/epimerase domains. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. Length = 367

>gnl|CDD|178298 PLN02695, PLN02695, GDP-D-mannose-3',5'-epimerase

 Score = 38.3 bits (89), Expect = 0.003
 Identities = 31/126 (24%), Positives = 52/126 (41%), Gaps = 18/126 (14%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINA-----TVFPGSDSSHLFALPGAGDANLRVFEA 66
           +C+TGA GFI + + + L    +  I +              H F L      +LRV E 
Sbjct: 24  ICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSEDMFCHEFHL-----VDLRVMEN 78

Query: 67  DVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELIL-PAVQGTLNVLEAAKRFGVRR 125
            +       +  +G   VF++A+       +     +I+      + N+LEAA+  GV+R
Sbjct: 79  CL-------KVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKR 131

Query: 126 VVVTSS 131
               SS
Sbjct: 132 FFYASS 137

Length = 370

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	278
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	100.0
PLN02214	342	cinnamoyl-CoA reductase	100.0
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	100.0
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	100.0
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	100.0
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	100.0
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	100.0
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	100.0
PLN00198	338	anthocyanidin reductase; Provisional	100.0
PLN02650	351	dihydroflavonol-4-reductase	100.0
PLN02583	297	cinnamoyl-CoA reductase	100.0
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	100.0
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	100.0
PLN02427	386	UDP-apiose/xylose synthase	100.0
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	100.0
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	100.0
PLN02572	442	UDP-sulfoquinovose synthase	100.0
PLN02896	353	cinnamyl-alcohol dehydrogenase	100.0
PLN02686	367	cinnamoyl-CoA reductase	100.0
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	100.0
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	100.0
PLN02260	668	probable rhamnose biosynthetic enzyme	100.0
PLN02166	436	dTDP-glucose 4,6-dehydratase	100.0
PLN02695	370	GDP-D-mannose-3',5'-epimerase	100.0
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	100.0
PLN02206	442	UDP-glucuronate decarboxylase	100.0
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	100.0
PLN02653	340	GDP-mannose 4,6-dehydratase	100.0
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	100.0
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	100.0
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	100.0
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	100.0
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	100.0
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	100.0
PLN02240	352	UDP-glucose 4-epimerase	100.0
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	100.0
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	100.0
PRK10675	338	UDP-galactose-4-epimerase; Provisional	100.0
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	100.0
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	100.0
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	100.0
PLN02996	491	fatty acyl-CoA reductase	100.0
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	100.0
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	100.0
CHL00194	317	ycf39 Ycf39; Provisional	100.0
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	100.0
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	100.0
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	100.0
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	100.0
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	100.0
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.97
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.97
PRK07201	657	short chain dehydrogenase; Provisional	99.97
PLN02778	298	3,5-epimerase/4-reductase	99.97
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.97
PLN00016	378	RNA-binding protein; Provisional	99.97
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.96
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.96
PRK05865	854	hypothetical protein; Provisional	99.96
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.96
PRK06482	276	short chain dehydrogenase; Provisional	99.96
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.96
PLN02503	605	fatty acyl-CoA reductase 2	99.96
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.95
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	99.95
PRK06180	277	short chain dehydrogenase; Provisional	99.95
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.95
PRK08263	275	short chain dehydrogenase; Provisional	99.95
PRK12320	699	hypothetical protein; Provisional	99.95
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.95
PRK05876	275	short chain dehydrogenase; Provisional	99.94
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.94
PRK06182	273	short chain dehydrogenase; Validated	99.94
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.94
PRK07775	274	short chain dehydrogenase; Provisional	99.94
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.94
PRK07060	245	short chain dehydrogenase; Provisional	99.94
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.94
PRK06914	280	short chain dehydrogenase; Provisional	99.94
PRK07067	257	sorbitol dehydrogenase; Provisional	99.94
PRK12746	254	short chain dehydrogenase; Provisional	99.94
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.94
PRK09135	249	pteridine reductase; Provisional	99.94
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.94
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	99.94
PLN02260	668	probable rhamnose biosynthetic enzyme	99.94
PRK06138	252	short chain dehydrogenase; Provisional	99.93
PRK06179	270	short chain dehydrogenase; Provisional	99.93
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.93
PRK07774	250	short chain dehydrogenase; Provisional	99.93
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.93
PRK07074	257	short chain dehydrogenase; Provisional	99.93
PRK06128	300	oxidoreductase; Provisional	99.93
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.93
PRK07806	248	short chain dehydrogenase; Provisional	99.93
PRK06194	287	hypothetical protein; Provisional	99.93
PLN03209	576	translocon at the inner envelope of chloroplast su	99.93
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.93
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.93
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.93
PRK05875	276	short chain dehydrogenase; Provisional	99.93
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.93
PRK05993	277	short chain dehydrogenase; Provisional	99.93
PRK08628	258	short chain dehydrogenase; Provisional	99.93
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.93
PRK06398	258	aldose dehydrogenase; Validated	99.93
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.93
PRK06500	249	short chain dehydrogenase; Provisional	99.93
PRK12827	249	short chain dehydrogenase; Provisional	99.93
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.93
PRK07985	294	oxidoreductase; Provisional	99.93
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.93
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.93
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.93
PRK08265	261	short chain dehydrogenase; Provisional	99.93
PLN02253	280	xanthoxin dehydrogenase	99.93
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.93
PRK12829	264	short chain dehydrogenase; Provisional	99.93
PRK09134	258	short chain dehydrogenase; Provisional	99.93
PRK06841	255	short chain dehydrogenase; Provisional	99.93
PRK07063	260	short chain dehydrogenase; Provisional	99.92
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.92
PRK07478	254	short chain dehydrogenase; Provisional	99.92
PRK07856	252	short chain dehydrogenase; Provisional	99.92
PRK05717	255	oxidoreductase; Validated	99.92
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.92
PRK07890	258	short chain dehydrogenase; Provisional	99.92
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.92
PRK12939	250	short chain dehydrogenase; Provisional	99.92
PRK06701	290	short chain dehydrogenase; Provisional	99.92
PRK06114	254	short chain dehydrogenase; Provisional	99.92
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.92
PRK12828	239	short chain dehydrogenase; Provisional	99.92
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.92
PRK06523	260	short chain dehydrogenase; Provisional	99.92
PRK08589	272	short chain dehydrogenase; Validated	99.92
PRK07024	257	short chain dehydrogenase; Provisional	99.92
PRK08226	263	short chain dehydrogenase; Provisional	99.92
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.92
PRK10538	248	malonic semialdehyde reductase; Provisional	99.92
PRK07035	252	short chain dehydrogenase; Provisional	99.92
PRK07576	264	short chain dehydrogenase; Provisional	99.92
PRK06172	253	short chain dehydrogenase; Provisional	99.92
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.92
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.92
PRK07454	241	short chain dehydrogenase; Provisional	99.92
PRK09291	257	short chain dehydrogenase; Provisional	99.92
PRK05867	253	short chain dehydrogenase; Provisional	99.92
PRK08264	238	short chain dehydrogenase; Validated	99.91
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.91
PRK06181	263	short chain dehydrogenase; Provisional	99.91
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.91
PRK07825	273	short chain dehydrogenase; Provisional	99.91
PRK05872	296	short chain dehydrogenase; Provisional	99.91
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.91
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.91
PRK09186	256	flagellin modification protein A; Provisional	99.91
PRK06101	240	short chain dehydrogenase; Provisional	99.91
PRK12747	252	short chain dehydrogenase; Provisional	99.91
PRK06139	330	short chain dehydrogenase; Provisional	99.91
PRK08643	256	acetoin reductase; Validated	99.91
PRK05693	274	short chain dehydrogenase; Provisional	99.91
PRK07814	263	short chain dehydrogenase; Provisional	99.91
PRK06123	248	short chain dehydrogenase; Provisional	99.91
KOG2774	366	consensus NAD dependent epimerase [General functio	99.91
PRK05650	270	short chain dehydrogenase; Provisional	99.91
PRK08339	263	short chain dehydrogenase; Provisional	99.91
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.91
PRK08267	260	short chain dehydrogenase; Provisional	99.91
PRK12742	237	oxidoreductase; Provisional	99.91
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.91
PRK08219	227	short chain dehydrogenase; Provisional	99.91
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.91
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.91
PRK06196	315	oxidoreductase; Provisional	99.91
PRK06949	258	short chain dehydrogenase; Provisional	99.91
PRK07109	334	short chain dehydrogenase; Provisional	99.91
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.91
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.91
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.91
PRK06197	306	short chain dehydrogenase; Provisional	99.91
PRK09242	257	tropinone reductase; Provisional	99.9
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.9
PRK12937	245	short chain dehydrogenase; Provisional	99.9
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.9
PRK08017	256	oxidoreductase; Provisional	99.9
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.9
PRK07577	234	short chain dehydrogenase; Provisional	99.9
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.9
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.9
PRK06198	260	short chain dehydrogenase; Provisional	99.9
PRK12743	256	oxidoreductase; Provisional	99.9
PRK07677	252	short chain dehydrogenase; Provisional	99.9
PRK08278	273	short chain dehydrogenase; Provisional	99.9
PRK08324	681	short chain dehydrogenase; Validated	99.9
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.9
PRK07326	237	short chain dehydrogenase; Provisional	99.9
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.9
PRK05866	293	short chain dehydrogenase; Provisional	99.9
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.9
PRK06057	255	short chain dehydrogenase; Provisional	99.9
PRK06483	236	dihydromonapterin reductase; Provisional	99.9
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	99.89
PRK07102	243	short chain dehydrogenase; Provisional	99.89
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.89
PRK12744	257	short chain dehydrogenase; Provisional	99.89
PRK07041	230	short chain dehydrogenase; Provisional	99.89
PRK07791	286	short chain dehydrogenase; Provisional	99.89
PRK08251	248	short chain dehydrogenase; Provisional	99.89
PRK07904	253	short chain dehydrogenase; Provisional	99.89
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.89
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.89
PRK08703	239	short chain dehydrogenase; Provisional	99.89
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.89
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.89
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.89
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.89
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.89
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.89
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.89
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.89
PRK06484	520	short chain dehydrogenase; Validated	99.89
PRK06924	251	short chain dehydrogenase; Provisional	99.89
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.89
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.89
PRK07831	262	short chain dehydrogenase; Provisional	99.89
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.89
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.88
PRK07069	251	short chain dehydrogenase; Validated	99.88
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.88
PRK09072	263	short chain dehydrogenase; Provisional	99.88
PRK07023	243	short chain dehydrogenase; Provisional	99.88
PRK07062	265	short chain dehydrogenase; Provisional	99.88
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.88
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.88
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.88
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.88
PRK06125	259	short chain dehydrogenase; Provisional	99.88
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.87
PRK06953	222	short chain dehydrogenase; Provisional	99.87
PRK05854	313	short chain dehydrogenase; Provisional	99.87
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.87
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.87
PRK07832	272	short chain dehydrogenase; Provisional	99.87
PRK07578	199	short chain dehydrogenase; Provisional	99.87
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.87
PRK08303	305	short chain dehydrogenase; Provisional	99.87
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.87
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.86
PRK06940	275	short chain dehydrogenase; Provisional	99.86
PRK07201	657	short chain dehydrogenase; Provisional	99.86
PRK05599	246	hypothetical protein; Provisional	99.86
PRK05855	582	short chain dehydrogenase; Validated	99.86
PRK12367	245	short chain dehydrogenase; Provisional	99.86
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.85
PLN02780	320	ketoreductase/ oxidoreductase	99.85
PRK05884	223	short chain dehydrogenase; Provisional	99.85
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.85
PRK08177	225	short chain dehydrogenase; Provisional	99.85
PRK06484	520	short chain dehydrogenase; Validated	99.85
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	99.84
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	99.84
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.84
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.83
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.83
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.83
KOG0725	270	consensus Reductases with broad range of substrate	99.82
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.82
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.82
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.82
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	99.8
PRK08862	227	short chain dehydrogenase; Provisional	99.8
PLN00015	308	protochlorophyllide reductase	99.79
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.79
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.79
COG2910	211	Putative NADH-flavin reductase [General function p	99.79
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.77
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.76
KOG1208	314	consensus Dehydrogenases with different specificit	99.76
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.75
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.74
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.74
COG1028	251	FabG Dehydrogenases with different specificities (	99.7
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.7
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.68
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.68
KOG4288	283	consensus Predicted oxidoreductase [General functi	99.66
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.66
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.66
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.62
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	99.62
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.58
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.53
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	99.48
KOG3019	315	consensus Predicted nucleoside-diphosphate sugar e	99.46
PRK06720	169	hypothetical protein; Provisional	99.41
PTZ00325	321	malate dehydrogenase; Provisional	99.4
PLN00106	323	malate dehydrogenase	99.3
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	99.29
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.29
PRK08309	177	short chain dehydrogenase; Provisional	99.26
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.13
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	99.09
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	99.0
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	98.93
PRK05086	312	malate dehydrogenase; Provisional	98.9
PRK09620	229	hypothetical protein; Provisional	98.89
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.84
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	98.79
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	98.75
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.61
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.6
PRK14982	340	acyl-ACP reductase; Provisional	98.56
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	98.55
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.52
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.44
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	98.37
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	98.3
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	98.24
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.23
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	98.23
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	98.22
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.19
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.18
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	98.16
PRK05442	326	malate dehydrogenase; Provisional	98.13
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	98.08
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	98.06
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	98.05
COG0569	225	TrkA K+ transport systems, NAD-binding component [	98.02
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	98.01
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	98.0
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	97.95
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.9
COG3268	382	Uncharacterized conserved protein [Function unknow	97.88
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	97.84
COG4982	866	3-oxoacyl-[acyl-carrier protein]	97.84
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.84
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	97.84
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	97.83
PLN00112	444	malate dehydrogenase (NADP); Provisional	97.81
PRK04148	134	hypothetical protein; Provisional	97.8
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	97.8
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	97.77
PRK09496	453	trkA potassium transporter peripheral membrane com	97.77
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	97.75
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	97.69
KOG1494	345	consensus NAD-dependent malate dehydrogenase [Ener	97.67
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	97.67
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	97.66
PTZ00082	321	L-lactate dehydrogenase; Provisional	97.63
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.61
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	97.61
PRK00048	257	dihydrodipicolinate reductase; Provisional	97.59
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	97.58
PTZ00117	319	malate dehydrogenase; Provisional	97.57
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	97.55
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	97.54
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	97.54
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.53
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	97.52
PRK06223	307	malate dehydrogenase; Reviewed	97.52
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	97.51
PLN02602	350	lactate dehydrogenase	97.47
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.46
PRK09496	453	trkA potassium transporter peripheral membrane com	97.44
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	97.42
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	97.42
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	97.41
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	97.39
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.36
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	97.35
PRK08223	287	hypothetical protein; Validated	97.35
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	97.34
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	97.34
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.33
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	97.32
PLN02383	344	aspartate semialdehyde dehydrogenase	97.32
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	97.3
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.28
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	97.27
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	97.27
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.25
PRK08328	231	hypothetical protein; Provisional	97.24
PRK15116	268	sulfur acceptor protein CsdL; Provisional	97.24
COG0002	349	ArgC Acetylglutamate semialdehyde dehydrogenase [A	97.24
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	97.23
PRK08306	296	dipicolinate synthase subunit A; Reviewed	97.22
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	97.2
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.19
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	97.15
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	97.15
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	97.13
PRK06598	369	aspartate-semialdehyde dehydrogenase; Reviewed	97.13
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	97.13
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.11
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	97.11
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	97.1
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	97.1
PRK10669	558	putative cation:proton antiport protein; Provision	97.09
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	97.09
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	97.09
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.07
PRK06019	372	phosphoribosylaminoimidazole carboxylase ATPase su	97.07
PRK08057	248	cobalt-precorrin-6x reductase; Reviewed	97.04
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.04
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	97.0
PRK06719	157	precorrin-2 dehydrogenase; Validated	97.0
KOG2018	430	consensus Predicted dinucleotide-utilizing enzyme	97.0
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	97.0
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.99
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	96.99
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.97
PLN00203	519	glutamyl-tRNA reductase	96.96
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.95
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.95
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.94
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	96.94
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	96.93
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	96.91
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	96.91
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	96.89
TIGR00978	341	asd_EA aspartate-semialdehyde dehydrogenase (non-p	96.89
COG0289	266	DapB Dihydrodipicolinate reductase [Amino acid tra	96.88
PRK08655	437	prephenate dehydrogenase; Provisional	96.87
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.84
PRK07574	385	formate dehydrogenase; Provisional	96.84
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.84
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.81
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.81
TIGR01851	310	argC_other N-acetyl-gamma-glutamyl-phosphate reduc	96.8
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.78
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.77
PRK03659	601	glutathione-regulated potassium-efflux system prot	96.76
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	96.76
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	96.75
PRK11863	313	N-acetyl-gamma-glutamyl-phosphate reductase; Provi	96.75
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	96.74
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.73
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	96.73
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	96.71
PRK14851	679	hypothetical protein; Provisional	96.7
PRK06728	347	aspartate-semialdehyde dehydrogenase; Provisional	96.67
PRK03562	621	glutathione-regulated potassium-efflux system prot	96.64
TIGR01019	286	sucCoAalpha succinyl-CoA synthetase, alpha subunit	96.64
PRK08040	336	putative semialdehyde dehydrogenase; Provisional	96.63
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	96.62
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	96.62
PRK14852	989	hypothetical protein; Provisional	96.61
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	96.6
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	96.59
COG0136	334	Asd Aspartate-semialdehyde dehydrogenase [Amino ac	96.58
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.57
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	96.55
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	96.52
PRK06849	389	hypothetical protein; Provisional	96.51
PRK07411	390	hypothetical protein; Validated	96.51
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	96.5
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	96.5
COG0026	375	PurK Phosphoribosylaminoimidazole carboxylase (NCA	96.48
PLN02948	577	phosphoribosylaminoimidazole carboxylase	96.46
PF02571	249	CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro:	96.45
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.45
KOG2013	603	consensus SMT3/SUMO-activating complex, catalytic	96.44
COG2099	257	CobK Precorrin-6x reductase [Coenzyme metabolism]	96.44
cd01486	307	Apg7 Apg7 is an E1-like protein, that activates tw	96.43
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	96.4
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	96.39
PRK00094	325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	96.39
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	96.37
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	96.37
PRK07877	722	hypothetical protein; Provisional	96.36
TIGR01771	299	L-LDH-NAD L-lactate dehydrogenase. This model repr	96.35
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.35
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	96.34
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	96.33
KOG0172	445	consensus Lysine-ketoglutarate reductase/saccharop	96.33
PLN02353	473	probable UDP-glucose 6-dehydrogenase	96.32
cd01339	300	LDH-like_MDH L-lactate dehydrogenase-like malate d	96.31
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	96.3
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.29
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	96.28
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	96.27
COG0240	329	GpsA Glycerol-3-phosphate dehydrogenase [Energy pr	96.26
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.25
cd01491	286	Ube1_repeat1 Ubiquitin activating enzyme (E1), rep	96.25
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	96.22
TIGR01142	380	purT phosphoribosylglycinamide formyltransferase 2	96.22
PRK13304	265	L-aspartate dehydrogenase; Reviewed	96.22
PRK13303	265	L-aspartate dehydrogenase; Provisional	96.22
PTZ00075	476	Adenosylhomocysteinase; Provisional	96.2
PRK15461	296	NADH-dependent gamma-hydroxybutyrate dehydrogenase	96.16
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	96.15
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	96.14
PRK07417	279	arogenate dehydrogenase; Reviewed	96.14
PRK14179	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.14
PRK06153	393	hypothetical protein; Provisional	96.13
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	96.11
TIGR01745	366	asd_gamma aspartate-semialdehyde dehydrogenase, ga	96.09
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	96.08

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=100.00  E-value=6e-48  Score=311.85  Aligned_cols=268  Identities=49%  Similarity=0.868  Sum_probs=239.7

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcc---cccCCCCCCCceEEEEccCCChhhHHHHhcCccEE
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSH---LFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~---~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~v   84 (278)
                      .+|+|+|||||||||++++++|+++|| .|++++|++++.+.   +..+++.+. +.+.+.+|++|++++.+++++||+|
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY-~V~gtVR~~~~~k~~~~L~~l~~a~~-~l~l~~aDL~d~~sf~~ai~gcdgV   82 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGY-TVRGTVRDPEDEKKTEHLRKLEGAKE-RLKLFKADLLDEGSFDKAIDGCDGV   82 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCC-EEEEEEcCcchhhhHHHHHhcccCcc-cceEEeccccccchHHHHHhCCCEE
Confidence            678999999999999999999999999 99999999887444   566665555 6999999999999999999999999


Q ss_pred             EEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcC-CCEEEEecceeeeecC-CCC-CCccccCCCCCchhhhhccC
Q 023689           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRRVVVTSSISAIVPN-PGW-KGKVFDETSWTDLEYCKSRK  161 (278)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~v~~Ss~~~~~~~-~~~-~~~~~~E~~~~~~~~~~~~~  161 (278)
                      ||.|.+..+.... +..+.++..+.|+.|++++|++.. ++|+|++||++++... +.. ....++|+.|.++.++....
T Consensus        83 fH~Asp~~~~~~~-~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~  161 (327)
T KOG1502|consen   83 FHTASPVDFDLED-PEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKK  161 (327)
T ss_pred             EEeCccCCCCCCC-cHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhH
Confidence            9999987764433 455899999999999999999987 9999999999999876 222 56789999999999988888


Q ss_pred             chhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHHHHHHHHHhh
Q 023689          162 KWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLL  241 (278)
Q Consensus       162 ~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  241 (278)
                      ..|..+|.++|+.+++++++.+++.+.+.|+.|+||...+........+.+++.|.....+.....++|++|+|.+.+.+
T Consensus       162 ~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n~~~~~VdVrDVA~AHv~a  241 (327)
T KOG1502|consen  162 LWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPNFWLAFVDVRDVALAHVLA  241 (327)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCCCCceeeEeHHHHHHHHHHH
Confidence            99999999999999999999999999999999999998886666677788888987777777777799999999999999


Q ss_pred             hcCCCCCceEEecCccccHHHHHHHHHHhCCCCCCCC
Q 023689          242 FESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHS  278 (278)
Q Consensus       242 ~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~p~  278 (278)
                      ++++.+.|+|++.++..++.|+++.+.+.+|.+++|.
T Consensus       242 ~E~~~a~GRyic~~~~~~~~ei~~~l~~~~P~~~ip~  278 (327)
T KOG1502|consen  242 LEKPSAKGRYICVGEVVSIKEIADILRELFPDYPIPK  278 (327)
T ss_pred             HcCcccCceEEEecCcccHHHHHHHHHHhCCCCCCCC
Confidence            9999999999999999899999999999999988874

>PLN02214 cinnamoyl-CoA reductase

Probab=100.00  E-value=6e-43  Score=296.44  Aligned_cols=267  Identities=43%  Similarity=0.728  Sum_probs=210.3

Q ss_pred             cccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcc--cccCCCCCCCceEEEEccCCChhhHHHHhcC
Q 023689            3 SEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSH--LFALPGAGDANLRVFEADVLDSGAVSRAVEG   80 (278)
Q Consensus         3 ~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~--~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~   80 (278)
                      ++..++||+||||||+||||++|+++|+++|+ .|++++|+.+....  +..+.... .+++++.+|++|.+++.+++++
T Consensus         4 ~~~~~~~~~vlVTGatGfIG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~~   81 (342)
T PLN02214          4 DVASPAGKTVCVTGAGGYIASWIVKILLERGY-TVKGTVRNPDDPKNTHLRELEGGK-ERLILCKADLQDYEALKAAIDG   81 (342)
T ss_pred             ccccCCCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCchhhhHHHHHHhhCCC-CcEEEEecCcCChHHHHHHHhc
Confidence            45567789999999999999999999999999 89999887543211  11221111 2688999999999999999999


Q ss_pred             ccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCC-CCccccCCCCCchhhhhc
Q 023689           81 CKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGW-KGKVFDETSWTDLEYCKS  159 (278)
Q Consensus        81 ~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~-~~~~~~E~~~~~~~~~~~  159 (278)
                      +|+|||+|+...     .++...+++|+.++.+++++|++.++++||++||.+++|+.+.. ...+++|+++....+...
T Consensus        82 ~d~Vih~A~~~~-----~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~  156 (342)
T PLN02214         82 CDGVFHTASPVT-----DDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKN  156 (342)
T ss_pred             CCEEEEecCCCC-----CCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhccc
Confidence            999999998642     35678899999999999999999999999999998777764332 123578887644333333


Q ss_pred             cCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCC-chhHHHHHHHhhCCCCcccccccCcccHHHHHHHH
Q 023689          160 RKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL-NASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQ  238 (278)
Q Consensus       160 ~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  238 (278)
                      +.+.|+.+|.++|.+++.++++++++++++||++||||...... .....+ .....+.....+++.++|||++|+|+++
T Consensus       157 p~~~Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~i~V~Dva~a~  235 (342)
T PLN02214        157 TKNWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHV-LKYLTGSAKTYANLTQAYVDVRDVALAH  235 (342)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHH-HHHHcCCcccCCCCCcCeeEHHHHHHHH
Confidence            45789999999999999999888999999999999999865432 122222 2445565555566789999999999999


Q ss_pred             HhhhcCCCCCceEEecCccccHHHHHHHHHHhCCCCCCC
Q 023689          239 VLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVH  277 (278)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~p  277 (278)
                      +.+++++...++|+++++..++.|+++.+.+.+|+.++|
T Consensus       236 ~~al~~~~~~g~yn~~~~~~~~~el~~~i~~~~~~~~~~  274 (342)
T PLN02214        236 VLVYEAPSASGRYLLAESARHRGEVVEILAKLFPEYPLP  274 (342)
T ss_pred             HHHHhCcccCCcEEEecCCCCHHHHHHHHHHHCCCCCCC
Confidence            999988766678887777899999999999999865544

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=1.1e-42  Score=273.90  Aligned_cols=251  Identities=23%  Similarity=0.261  Sum_probs=202.7

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEec-CCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc--CccEEEE
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVF-PGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFH   86 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r-~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vi~   86 (278)
                      |+||||||+||||+|.+.+|++.|+ +|++++. +....+.+...      ..+|+++|+.|.+.+.++++  ++|.|||
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~-~vvV~DNL~~g~~~~v~~~------~~~f~~gDi~D~~~L~~vf~~~~idaViH   73 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGH-EVVVLDNLSNGHKIALLKL------QFKFYEGDLLDRALLTAVFEENKIDAVVH   73 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCC-eEEEEecCCCCCHHHhhhc------cCceEEeccccHHHHHHHHHhcCCCEEEE
Confidence            5899999999999999999999999 6766665 33333333321      26899999999999999997  6899999


Q ss_pred             ecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhh
Q 023689           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPV  166 (278)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~  166 (278)
                      +||...+..+.+.+.++++.|+.||.+|+++|++.++++||| ||++++|+.+..  .|++|+.+..|.      ++||.
T Consensus        74 FAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vF-SStAavYG~p~~--~PI~E~~~~~p~------NPYG~  144 (329)
T COG1087          74 FAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIF-SSTAAVYGEPTT--SPISETSPLAPI------NPYGR  144 (329)
T ss_pred             CccccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEE-ecchhhcCCCCC--cccCCCCCCCCC------Ccchh
Confidence            999888877788899999999999999999999999999999 555888888875  899999988875      89999


Q ss_pred             HHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCC-------CchhHHHHHHHhhCCCCcc-----------cccccCc
Q 023689          167 SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY-------LNASCAVLQQLLQGSKDTQ-----------EYHWLGA  228 (278)
Q Consensus       167 sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~-------~~~~~~~~~~~~~~~~~~~-----------~~~~~~~  228 (278)
                      ||.+.|++++.+++.++++++++|.+++.|......       ......++.+...|+...+           +...||+
T Consensus       145 sKlm~E~iL~d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDY  224 (329)
T COG1087         145 SKLMSEEILRDAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDY  224 (329)
T ss_pred             HHHHHHHHHHHHHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeee
Confidence            999999999999999999999999999998754321       1223333334344443322           2268999


Q ss_pred             ccHHHHHHHHHhhhcCCCCCc---eEEec-CccccHHHHHHHHHHhCCCCCCC
Q 023689          229 VPVKDVAKAQVLLFESPAASG---RYLCT-NGIYQFGDFAERVSKLFPEFPVH  277 (278)
Q Consensus       229 i~~~D~a~~~~~~~~~~~~~~---~~~~~-~~~~s~~e~~~~i~~~~~~~~~p  277 (278)
                      ||+.|+|++-+.+++....+|   +|+++ +..+|+.|+++.+++..+ .++|
T Consensus       225 IHV~DLA~aH~~Al~~L~~~g~~~~~NLG~G~G~SV~evi~a~~~vtg-~~ip  276 (329)
T COG1087         225 IHVDDLADAHVLALKYLKEGGSNNIFNLGSGNGFSVLEVIEAAKKVTG-RDIP  276 (329)
T ss_pred             eehhHHHHHHHHHHHHHHhCCceeEEEccCCCceeHHHHHHHHHHHhC-CcCc
Confidence            999999999999987654333   57655 779999999999999984 4444

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=4.1e-41  Score=283.71  Aligned_cols=268  Identities=40%  Similarity=0.703  Sum_probs=210.0

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCC--CCCCceEEEEccCCChhhHHHHhcCccEE
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPG--AGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~--~~~~~v~~~~~Dl~d~~~~~~~~~~~d~v   84 (278)
                      ..+|+|||||||||||++++++|+++|+ +|+++.|+.........+..  ....+++++.+|++|++.+.++++++|+|
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   81 (322)
T PLN02986          3 GGGKLVCVTGASGYIASWIVKLLLLRGY-TVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAV   81 (322)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEE
Confidence            4468999999999999999999999999 89988887654332221110  01127899999999999999999999999


Q ss_pred             EEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhc-CCCEEEEecceeeee-cCCC-CCCccccCCCCCchhhhhccC
Q 023689           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-GVRRVVVTSSISAIV-PNPG-WKGKVFDETSWTDLEYCKSRK  161 (278)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~v~~Ss~~~~~-~~~~-~~~~~~~E~~~~~~~~~~~~~  161 (278)
                      ||+|+..... ..++....+++|+.|+.+++++|++. ++++||++||.++++ +.+. ....+++|+++..+.++..+.
T Consensus        82 ih~A~~~~~~-~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~  160 (322)
T PLN02986         82 FHTASPVFFT-VKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETK  160 (322)
T ss_pred             EEeCCCcCCC-CCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhccc
Confidence            9999874432 12334567899999999999999886 689999999977653 3221 123568888876654444445


Q ss_pred             chhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHHHHHHHHHhh
Q 023689          162 KWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLL  241 (278)
Q Consensus       162 ~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  241 (278)
                      +.|+.+|.++|.+++.+.++++++++++||+++|||...........++..+..+.+. .+.+.++++|++|+|++++.+
T Consensus       161 ~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~v~v~Dva~a~~~a  239 (322)
T PLN02986        161 NWYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNL-FNNRFYRFVDVRDVALAHIKA  239 (322)
T ss_pred             cchHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCC-CCCcCcceeEHHHHHHHHHHH
Confidence            7899999999999999998899999999999999998654333334556666666653 455678999999999999999


Q ss_pred             hcCCCCCceEEecCccccHHHHHHHHHHhCCCCCCC
Q 023689          242 FESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVH  277 (278)
Q Consensus       242 ~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~p  277 (278)
                      ++++...++|+++++.+++.|+++.+.+.+|+..+|
T Consensus       240 l~~~~~~~~yni~~~~~s~~e~~~~i~~~~~~~~~~  275 (322)
T PLN02986        240 LETPSANGRYIIDGPIMSVNDIIDILRELFPDLCIA  275 (322)
T ss_pred             hcCcccCCcEEEecCCCCHHHHHHHHHHHCCCCCCC
Confidence            998766678988888899999999999999875554

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=4.4e-41  Score=283.66  Aligned_cols=266  Identities=43%  Similarity=0.748  Sum_probs=206.4

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc---CCCCCCCceEEEEccCCChhhHHHHhcCccEE
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA---LPGAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~---~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~v   84 (278)
                      ++|+|||||||||||++|+++|+++|+ .|++++|+.........   ..... .+++++++|++|++.+.++++++|+|
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~d~V   80 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGY-TVKATVRDPNDPKKTEHLLALDGAK-ERLHLFKANLLEEGSFDSVVDGCEGV   80 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCC-EEEEEEcCCCchhhHHHHHhccCCC-CceEEEeccccCcchHHHHHcCCCEE
Confidence            468999999999999999999999999 89888887643221111   11111 27899999999999999999999999


Q ss_pred             EEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhc-CCCEEEEecceeee-ecC-CCCCCccccCCCCCchhhhhccC
Q 023689           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-GVRRVVVTSSISAI-VPN-PGWKGKVFDETSWTDLEYCKSRK  161 (278)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~v~~Ss~~~~-~~~-~~~~~~~~~E~~~~~~~~~~~~~  161 (278)
                      ||+|+..... ..+.....+++|+.++.+++++|++. ++++||++||.+++ |+. +.....+++|+.+..+.++..+.
T Consensus        81 ih~A~~~~~~-~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~  159 (322)
T PLN02662         81 FHTASPFYHD-VTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESK  159 (322)
T ss_pred             EEeCCcccCC-CCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhccc
Confidence            9999865421 12222478899999999999999887 88999999997653 432 21122467888776665555555


Q ss_pred             chhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHHHHHHHHHhh
Q 023689          162 KWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLL  241 (278)
Q Consensus       162 ~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  241 (278)
                      +.|+.+|.++|++++.++++++++++++||+++|||............+.+...+.+ ..+.+.++|+|++|+|++++.+
T Consensus       160 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~a~~~~  238 (322)
T PLN02662        160 LWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQ-TFPNASYRWVDVRDVANAHIQA  238 (322)
T ss_pred             chHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCc-cCCCCCcCeEEHHHHHHHHHHH
Confidence            789999999999999998888999999999999999865433334445555555544 3456789999999999999999


Q ss_pred             hcCCCCCceEEecCccccHHHHHHHHHHhCCCCCCC
Q 023689          242 FESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVH  277 (278)
Q Consensus       242 ~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~p  277 (278)
                      ++++...|.|++++.+++++|+++.+.+.+|..++|
T Consensus       239 ~~~~~~~~~~~~~g~~~s~~e~~~~i~~~~~~~~~~  274 (322)
T PLN02662        239 FEIPSASGRYCLVERVVHYSEVVKILHELYPTLQLP  274 (322)
T ss_pred             hcCcCcCCcEEEeCCCCCHHHHHHHHHHHCCCCCCC
Confidence            988665677877788899999999999988765443

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=1.5e-40  Score=280.74  Aligned_cols=263  Identities=41%  Similarity=0.715  Sum_probs=207.8

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc---CCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA---LPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~---~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      +|++|||||+||||++++++|+++|+ +|++..|+.........   .... ..+++++.+|++|++++.++++++|+||
T Consensus         5 ~k~vlVtG~~G~IG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~d~vi   82 (325)
T PLN02989          5 GKVVCVTGASGYIASWIVKLLLFRGY-TINATVRDPKDRKKTDHLLALDGA-KERLKLFKADLLDEGSFELAIDGCETVF   82 (325)
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCC-EEEEEEcCCcchhhHHHHHhccCC-CCceEEEeCCCCCchHHHHHHcCCCEEE
Confidence            68999999999999999999999999 88888777654322111   1111 1268899999999999999999999999


Q ss_pred             EecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhc-CCCEEEEecceeeeecCCC--CCCccccCCCCCchhhhhccCc
Q 023689           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-GVRRVVVTSSISAIVPNPG--WKGKVFDETSWTDLEYCKSRKK  162 (278)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~v~~Ss~~~~~~~~~--~~~~~~~E~~~~~~~~~~~~~~  162 (278)
                      |+|+........+++...+++|+.++.+++++|.+. +.++||++||.+++++...  ....+++|+++..|.....+.+
T Consensus        83 h~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~  162 (325)
T PLN02989         83 HTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQ  162 (325)
T ss_pred             EeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhccccc
Confidence            999975443334566788999999999999999885 5789999999877765421  1235688988877654334457


Q ss_pred             hhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHHHHHHHHHhhh
Q 023689          163 WYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLF  242 (278)
Q Consensus       163 ~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  242 (278)
                      .|+.+|.++|++++.++++++++++++||+++|||...........++.++..+..+. ..+.++|+|++|+|++++.++
T Consensus       163 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~-~~~~r~~i~v~Dva~a~~~~l  241 (325)
T PLN02989        163 WYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPF-NTTHHRFVDVRDVALAHVKAL  241 (325)
T ss_pred             chHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCC-CCcCcCeeEHHHHHHHHHHHh
Confidence            8999999999999999988899999999999999987654334445566666665443 345689999999999999999


Q ss_pred             cCCCCCceEEecCccccHHHHHHHHHHhCCCC
Q 023689          243 ESPAASGRYLCTNGIYQFGDFAERVSKLFPEF  274 (278)
Q Consensus       243 ~~~~~~~~~~~~~~~~s~~e~~~~i~~~~~~~  274 (278)
                      +++...++|+++++.+|++|+++.+.+.+|..
T Consensus       242 ~~~~~~~~~ni~~~~~s~~ei~~~i~~~~~~~  273 (325)
T PLN02989        242 ETPSANGRYIIDGPVVTIKDIENVLREFFPDL  273 (325)
T ss_pred             cCcccCceEEEecCCCCHHHHHHHHHHHCCCC
Confidence            87665578888888999999999999999754

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=100.00  E-value=6.5e-41  Score=284.90  Aligned_cols=256  Identities=16%  Similarity=0.096  Sum_probs=199.3

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCc-ccccCC----CCCCCceEEEEccCCChhhHHHHhcCc
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS-HLFALP----GAGDANLRVFEADVLDSGAVSRAVEGC   81 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~-~~~~~~----~~~~~~v~~~~~Dl~d~~~~~~~~~~~   81 (278)
                      +++|+|||||||||||++|+++|+++|+ +|++++|...... ....+.    .....+++++.+|++|.+.+.++++++
T Consensus        13 ~~~~~vlVtGatGfiG~~lv~~L~~~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~   91 (348)
T PRK15181         13 LAPKRWLITGVAGFIGSGLLEELLFLNQ-TVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNV   91 (348)
T ss_pred             ccCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCC
Confidence            4678999999999999999999999999 8999987543211 111110    000116889999999999999999999


Q ss_pred             cEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccC
Q 023689           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRK  161 (278)
Q Consensus        82 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  161 (278)
                      |+|||+|+.........++...+++|+.|+.+++++|++.++++|||+||.+++ +...  ..+..|+++..|.      
T Consensus        92 d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vy-g~~~--~~~~~e~~~~~p~------  162 (348)
T PRK15181         92 DYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTY-GDHP--DLPKIEERIGRPL------  162 (348)
T ss_pred             CEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhh-CCCC--CCCCCCCCCCCCC------
Confidence            999999997654333455677899999999999999999999999999986554 4322  2445666654442      


Q ss_pred             chhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCC---CchhHHHHHHHhhCCCCcc---cccccCcccHHHHH
Q 023689          162 KWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY---LNASCAVLQQLLQGSKDTQ---EYHWLGAVPVKDVA  235 (278)
Q Consensus       162 ~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~---~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~D~a  235 (278)
                      ++|+.+|.++|.+++.++++++++++++||+++|||.....   ...+..++.+...+.++..   +.+.++++|++|+|
T Consensus       163 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a  242 (348)
T PRK15181        163 SPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVI  242 (348)
T ss_pred             ChhhHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHH
Confidence            68999999999999999888899999999999999976433   1346677777777776654   34689999999999


Q ss_pred             HHHHhhhcCCC---CCceEEe-cCccccHHHHHHHHHHhCC
Q 023689          236 KAQVLLFESPA---ASGRYLC-TNGIYQFGDFAERVSKLFP  272 (278)
Q Consensus       236 ~~~~~~~~~~~---~~~~~~~-~~~~~s~~e~~~~i~~~~~  272 (278)
                      ++++.++....   .+++|++ +++++|++|+++.+.+.++
T Consensus       243 ~a~~~~~~~~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~~  283 (348)
T PRK15181        243 QANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLN  283 (348)
T ss_pred             HHHHHHHhcccccCCCCEEEecCCCcEeHHHHHHHHHHHhC
Confidence            99988775432   3457866 4678999999999998875

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=1.6e-40  Score=260.57  Aligned_cols=254  Identities=19%  Similarity=0.236  Sum_probs=213.5

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCC-eEEEEecCCC--CCcccccCCCCCCCceEEEEccCCChhhHHHHhc--CccEE
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYT-SINATVFPGS--DSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGV   84 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~-~v~~~~r~~~--~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~v   84 (278)
                      |++|||||.||||+.+++.++++..+ .|+.++.-.-  ..+.+..+.+  +.+..|+++|++|.+.+.++++  .+|+|
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~--~~~~~fv~~DI~D~~~v~~~~~~~~~D~V   78 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVED--SPRYRFVQGDICDRELVDRLFKEYQPDAV   78 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhc--CCCceEEeccccCHHHHHHHHHhcCCCeE
Confidence            58999999999999999999988652 3666655221  1222222322  1289999999999999999998  58999


Q ss_pred             EEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCC-EEEEecceeeeecCCCCCCccccCCCCCchhhhhccCch
Q 023689           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW  163 (278)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~-~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  163 (278)
                      +|+|+..+++.+...+..++++|+.||.+||+++++...+ +|+++|| ..+|+........++|+++..|.      ++
T Consensus        79 vhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HIST-DEVYG~l~~~~~~FtE~tp~~Ps------SP  151 (340)
T COG1088          79 VHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHIST-DEVYGDLGLDDDAFTETTPYNPS------SP  151 (340)
T ss_pred             EEechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEecc-ccccccccCCCCCcccCCCCCCC------CC
Confidence            9999999998888999999999999999999999999754 8999997 77777765544579999988885      79


Q ss_pred             hhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcc-c--ccccCcccHHHHHHHHHh
Q 023689          164 YPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ-E--YHWLGAVPVKDVAKAQVL  240 (278)
Q Consensus       164 y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~i~~~D~a~~~~~  240 (278)
                      |+.||+.++.++++|.+.+|+++++.|+++-|||.+.+- .+++..+...+.|.++.+ +  .+.|||+|++|-|+++..
T Consensus       152 YSASKAasD~lVray~~TYglp~~ItrcSNNYGPyqfpE-KlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~  230 (340)
T COG1088         152 YSASKAASDLLVRAYVRTYGLPATITRCSNNYGPYQFPE-KLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDL  230 (340)
T ss_pred             cchhhhhHHHHHHHHHHHcCCceEEecCCCCcCCCcCch-hhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHH
Confidence            999999999999999999999999999999999987654 567788888888888766 4  489999999999999999


Q ss_pred             hhcCCCCCceEEec-CccccHHHHHHHHHHhCCC
Q 023689          241 LFESPAASGRYLCT-NGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       241 ~~~~~~~~~~~~~~-~~~~s~~e~~~~i~~~~~~  273 (278)
                      ++.+...+.+|+++ +...+-.|+++.|++.+++
T Consensus       231 Vl~kg~~GE~YNIgg~~E~~Nlevv~~i~~~l~~  264 (340)
T COG1088         231 VLTKGKIGETYNIGGGNERTNLEVVKTICELLGK  264 (340)
T ss_pred             HHhcCcCCceEEeCCCccchHHHHHHHHHHHhCc
Confidence            99998886688765 5578899999999999864

>PLN00198 anthocyanidin reductase; Provisional

Probab=100.00  E-value=6.2e-39  Score=272.15  Aligned_cols=272  Identities=36%  Similarity=0.612  Sum_probs=199.7

Q ss_pred             CccccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccc---ccCCCCCCCceEEEEccCCChhhHHHH
Q 023689            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL---FALPGAGDANLRVFEADVLDSGAVSRA   77 (278)
Q Consensus         1 m~~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~---~~~~~~~~~~v~~~~~Dl~d~~~~~~~   77 (278)
                      |......++|+||||||+||||++|+++|+++|+ +|+++.|+.......   ..+... + +++++.+|++|++++.++
T Consensus         1 ~~~~~~~~~~~vlItG~~GfIG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~-~-~~~~~~~Dl~d~~~~~~~   77 (338)
T PLN00198          1 MATLTPTGKKTACVIGGTGFLASLLIKLLLQKGY-AVNTTVRDPENQKKIAHLRALQEL-G-DLKIFGADLTDEESFEAP   77 (338)
T ss_pred             CCcccCCCCCeEEEECCchHHHHHHHHHHHHCCC-EEEEEECCCCCHHHHHHHHhcCCC-C-ceEEEEcCCCChHHHHHH
Confidence            4444456678999999999999999999999999 888888876432211   111111 1 688999999999999999


Q ss_pred             hcCccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhc-CCCEEEEecceeeeecCCCC-CCccccCCCCCchh
Q 023689           78 VEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-GVRRVVVTSSISAIVPNPGW-KGKVFDETSWTDLE  155 (278)
Q Consensus        78 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~v~~Ss~~~~~~~~~~-~~~~~~E~~~~~~~  155 (278)
                      ++++|+|||+|+..... ..+.....+++|+.++.++++++++. ++++||++||.++++..... ...+++|+.+....
T Consensus        78 ~~~~d~vih~A~~~~~~-~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~  156 (338)
T PLN00198         78 IAGCDLVFHVATPVNFA-SEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVE  156 (338)
T ss_pred             HhcCCEEEEeCCCCccC-CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchh
Confidence            99999999999864321 12333457899999999999999886 58899999997776543211 12345665432211


Q ss_pred             h---hhccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcc-c-------cc
Q 023689          156 Y---CKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ-E-------YH  224 (278)
Q Consensus       156 ~---~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~-~-------~~  224 (278)
                      .   ...+.++|+.||.++|.+++.++++++++++++||+++|||............+.+...+.+... +       ++
T Consensus       157 ~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  236 (338)
T PLN00198        157 FLTSEKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQMLSG  236 (338)
T ss_pred             hhhhcCCccchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCccccccccccccccC
Confidence            0   11234679999999999999999889999999999999999864332222223344455544322 1       12


Q ss_pred             ccCcccHHHHHHHHHhhhcCCCCCceEEecCccccHHHHHHHHHHhCCCCCC
Q 023689          225 WLGAVPVKDVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPV  276 (278)
Q Consensus       225 ~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~  276 (278)
                      .++++|++|+|++++.++++....+.|++++..+++.|+++.+.+.+|..++
T Consensus       237 ~~~~i~V~D~a~a~~~~~~~~~~~~~~~~~~~~~s~~el~~~i~~~~~~~~~  288 (338)
T PLN00198        237 SISITHVEDVCRAHIFLAEKESASGRYICCAANTSVPELAKFLIKRYPQYQV  288 (338)
T ss_pred             CcceeEHHHHHHHHHHHhhCcCcCCcEEEecCCCCHHHHHHHHHHHCCCCCC
Confidence            4799999999999999998765556788888889999999999999875433

>PLN02650 dihydroflavonol-4-reductase

Probab=100.00  E-value=1.5e-38  Score=271.02  Aligned_cols=264  Identities=38%  Similarity=0.683  Sum_probs=195.1

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCC--CCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGA--GDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~--~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      +.|+||||||+||||++|+++|+++|+ +|++++|+......+..+...  ...+++++.+|++|.+.+.++++++|+||
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~Vi   82 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGY-TVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVF   82 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCC-EEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEE
Confidence            347999999999999999999999999 899888876544322211100  01158899999999999999999999999


Q ss_pred             EecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcC-CCEEEEecceeeeecCCCCCCccccCCCCCchhh---hhccC
Q 023689           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEY---CKSRK  161 (278)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~---~~~~~  161 (278)
                      |+|+..... ..++....+++|+.++.+++++|++.+ +++||++||.+++++.... ...++|+.+.....   ...+.
T Consensus        83 H~A~~~~~~-~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~-~~~~~E~~~~~~~~~~~~~~~~  160 (351)
T PLN02650         83 HVATPMDFE-SKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQ-KPVYDEDCWSDLDFCRRKKMTG  160 (351)
T ss_pred             EeCCCCCCC-CCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCC-CCccCcccCCchhhhhcccccc
Confidence            999865432 123345789999999999999999876 7899999997666543321 12256665422111   11223


Q ss_pred             chhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHH--HhhCCCCcc-cccccCcccHHHHHHHH
Q 023689          162 KWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQ--LLQGSKDTQ-EYHWLGAVPVKDVAKAQ  238 (278)
Q Consensus       162 ~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~i~~~D~a~~~  238 (278)
                      ++|+.||.++|.+++.+++++|++++++||+++|||......  ...++..  ...+..... ..+.++|+|++|+|+++
T Consensus       161 ~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~r~~v~V~Dva~a~  238 (351)
T PLN02650        161 WMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSM--PPSLITALSLITGNEAHYSIIKQGQFVHLDDLCNAH  238 (351)
T ss_pred             chHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCC--CccHHHHHHHhcCCccccCcCCCcceeeHHHHHHHH
Confidence            579999999999999999899999999999999999765431  1111211  122332212 12458999999999999


Q ss_pred             HhhhcCCCCCceEEecCccccHHHHHHHHHHhCCCCCC
Q 023689          239 VLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPV  276 (278)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~  276 (278)
                      +.+++++...+.|+++++++++.|+++.+.+.+|...+
T Consensus       239 ~~~l~~~~~~~~~i~~~~~~s~~el~~~i~~~~~~~~~  276 (351)
T PLN02650        239 IFLFEHPAAEGRYICSSHDATIHDLAKMLREKYPEYNI  276 (351)
T ss_pred             HHHhcCcCcCceEEecCCCcCHHHHHHHHHHhCcccCC
Confidence            99998766566888888899999999999998875444

>PLN02583 cinnamoyl-CoA reductase

Probab=100.00  E-value=1.6e-38  Score=264.58  Aligned_cols=257  Identities=32%  Similarity=0.543  Sum_probs=200.3

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcc---cccCCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSH---LFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~---~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      +|+|||||||||||++++++|+++|+ +|+++.|+......   +..+.... .+++++++|++|.+++.+++.++|.|+
T Consensus         6 ~k~vlVTGatG~IG~~lv~~Ll~~G~-~V~~~~R~~~~~~~~~~~~~l~~~~-~~~~~~~~Dl~d~~~~~~~l~~~d~v~   83 (297)
T PLN02583          6 SKSVCVMDASGYVGFWLVKRLLSRGY-TVHAAVQKNGETEIEKEIRGLSCEE-ERLKVFDVDPLDYHSILDALKGCSGLF   83 (297)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEEcCchhhhHHHHHHhcccCC-CceEEEEecCCCHHHHHHHHcCCCEEE
Confidence            47899999999999999999999999 89988885432211   12221111 268899999999999999999999999


Q ss_pred             EecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhc-CCCEEEEecceeeeecC-CC-CCCccccCCCCCchhhhhccCc
Q 023689           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-GVRRVVVTSSISAIVPN-PG-WKGKVFDETSWTDLEYCKSRKK  162 (278)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~v~~Ss~~~~~~~-~~-~~~~~~~E~~~~~~~~~~~~~~  162 (278)
                      |.++.....  ...++..+++|+.|+.+++++|.+. ++++||++||.++++.. .. ....+++|++|..+.++..+..
T Consensus        84 ~~~~~~~~~--~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  161 (297)
T PLN02583         84 CCFDPPSDY--PSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKL  161 (297)
T ss_pred             EeCccCCcc--cccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhccc
Confidence            987643321  2235788999999999999999886 58899999998776422 11 1235688888876666555556


Q ss_pred             hhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHHHHHHHHHhhh
Q 023689          163 WYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLF  242 (278)
Q Consensus       163 ~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  242 (278)
                      .|+.||.++|++++.++++++++++++||+.||||......        ....+.....+...+++||++|+|++++.++
T Consensus       162 ~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~--------~~~~~~~~~~~~~~~~~v~V~Dva~a~~~al  233 (297)
T PLN02583        162 WHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHN--------PYLKGAAQMYENGVLVTVDVNFLVDAHIRAF  233 (297)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCch--------hhhcCCcccCcccCcceEEHHHHHHHHHHHh
Confidence            89999999999999998888999999999999999764321        1223333333445678999999999999999


Q ss_pred             cCCCCCceEEecCcccc-HHHHHHHHHHhCCCCCCC
Q 023689          243 ESPAASGRYLCTNGIYQ-FGDFAERVSKLFPEFPVH  277 (278)
Q Consensus       243 ~~~~~~~~~~~~~~~~s-~~e~~~~i~~~~~~~~~p  277 (278)
                      +.+...++|++.++..+ +.++++.+.+.+|+.++|
T Consensus       234 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~p~~~~~  269 (297)
T PLN02583        234 EDVSSYGRYLCFNHIVNTEEDAVKLAQMLSPLIPSP  269 (297)
T ss_pred             cCcccCCcEEEecCCCccHHHHHHHHHHhCCCCCCC
Confidence            98777789988877655 678999999999998776

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=100.00  E-value=1.9e-38  Score=269.99  Aligned_cols=254  Identities=17%  Similarity=0.286  Sum_probs=195.3

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHC-CCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCC-ChhhHHHHhcCccEEEE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVL-DSGAVSRAVEGCKGVFH   86 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~-g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~-d~~~~~~~~~~~d~vi~   86 (278)
                      ||+|||||||||||++|+++|+++ |+ +|++++|+......+..     ...++++.+|++ +.+.+.++++++|+|||
T Consensus         1 m~~ilVtGatGfiGs~l~~~L~~~~~~-~V~~~~r~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH   74 (347)
T PRK11908          1 MKKVLILGVNGFIGHHLSKRILETTDW-EVYGMDMQTDRLGDLVN-----HPRMHFFEGDITINKEWIEYHVKKCDVILP   74 (347)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhCCCC-eEEEEeCcHHHHHHhcc-----CCCeEEEeCCCCCCHHHHHHHHcCCCEEEE
Confidence            578999999999999999999987 68 89999886533222111     116899999998 67788888999999999


Q ss_pred             ecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCch-hhhhccCchhh
Q 023689           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDL-EYCKSRKKWYP  165 (278)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~-~~~~~~~~~y~  165 (278)
                      +|+.........++...+++|+.++.+++++|++.+ ++||++||..+ |+...  ..+++|++.+.. .+...+.+.|+
T Consensus        75 ~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~-~~~v~~SS~~v-yg~~~--~~~~~ee~~~~~~~~~~~p~~~Y~  150 (347)
T PRK11908         75 LVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEV-YGMCP--DEEFDPEASPLVYGPINKPRWIYA  150 (347)
T ss_pred             CcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC-CeEEEEeccee-eccCC--CcCcCccccccccCcCCCccchHH
Confidence            998755433345667889999999999999999987 79999999765 44322  134566543211 01112346899


Q ss_pred             hHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCC-------CCchhHHHHHHHhhCCCCcc---cccccCcccHHHHH
Q 023689          166 VSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQP-------YLNASCAVLQQLLQGSKDTQ---EYHWLGAVPVKDVA  235 (278)
Q Consensus       166 ~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~-------~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~D~a  235 (278)
                      .+|.++|++++.++++++++++++||+++|||....       ....+..++.++..+.+..+   +.+.++++|++|+|
T Consensus       151 ~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a  230 (347)
T PRK11908        151 CSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGI  230 (347)
T ss_pred             HHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHHH
Confidence            999999999999998899999999999999997532       12346677777777877554   34789999999999


Q ss_pred             HHHHhhhcCCC---CCceEEecC-c-cccHHHHHHHHHHhCC
Q 023689          236 KAQVLLFESPA---ASGRYLCTN-G-IYQFGDFAERVSKLFP  272 (278)
Q Consensus       236 ~~~~~~~~~~~---~~~~~~~~~-~-~~s~~e~~~~i~~~~~  272 (278)
                      ++++.+++++.   .++.|++++ + .+|++|+++.|.+.++
T Consensus       231 ~a~~~~~~~~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~  272 (347)
T PRK11908        231 DALMKIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAA  272 (347)
T ss_pred             HHHHHHHhCccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhc
Confidence            99999998753   244787765 3 6999999999998764

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=100.00  E-value=1.7e-38  Score=260.48  Aligned_cols=247  Identities=30%  Similarity=0.333  Sum_probs=184.1

Q ss_pred             EEeCcchhhHHHHHHHHHHCCC-CeEEEEecCCCCCc--ccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEecc
Q 023689           13 CVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSS--HLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (278)
Q Consensus        13 lItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a~   89 (278)
                      |||||+||||++|+++|+++|. ..|.++++......  .....     ....++++|++|++++.++++++|+|||+|+
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~-----~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa   75 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKS-----GVKEYIQGDITDPESLEEALEGVDVVFHTAA   75 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcc-----cceeEEEeccccHHHHHHHhcCCceEEEeCc
Confidence            6999999999999999999993 38888887654432  11111     0334999999999999999999999999999


Q ss_pred             cCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCC-CCccccCCCCCchhhhhccCchhhhHH
Q 023689           90 PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGW-KGKVFDETSWTDLEYCKSRKKWYPVSK  168 (278)
Q Consensus        90 ~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~-~~~~~~E~~~~~~~~~~~~~~~y~~sK  168 (278)
                      ...... ....+..+++|+.||++++++|++.++++|||+||.+++...... .-...+|+.+.    .......|+.||
T Consensus        76 ~~~~~~-~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~----~~~~~~~Y~~SK  150 (280)
T PF01073_consen   76 PVPPWG-DYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPY----PSSPLDPYAESK  150 (280)
T ss_pred             cccccC-cccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcc----cccccCchHHHH
Confidence            765432 356788999999999999999999999999999999887653221 11123454432    223457899999


Q ss_pred             HHHHHHHHHHHH---h--cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCC-CCcc--cccccCcccHHHHHHHHHh
Q 023689          169 TLAEKAAWEFAE---K--HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGS-KDTQ--EYHWLGAVPVKDVAKAQVL  240 (278)
Q Consensus       169 ~~~e~~~~~~~~---~--~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~i~~~D~a~~~~~  240 (278)
                      .++|++++++..   +  ..+.+++|||+.||||.+.........   ....|. .+..  +....+++|++|+|.+.+.
T Consensus       151 ~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~---~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvl  227 (280)
T PF01073_consen  151 ALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVK---MVRSGLFLFQIGDGNNLFDFVYVENVAHAHVL  227 (280)
T ss_pred             HHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccchhhH---HHHhcccceeecCCCceECcEeHHHHHHHHHH
Confidence            999999998765   2  259999999999999987655333322   333332 2222  3468999999999999988


Q ss_pred             hhcC---C----CCCc-eEE-ecCcccc-HHHHHHHHHHhCC
Q 023689          241 LFES---P----AASG-RYL-CTNGIYQ-FGDFAERVSKLFP  272 (278)
Q Consensus       241 ~~~~---~----~~~~-~~~-~~~~~~s-~~e~~~~i~~~~~  272 (278)
                      +.+.   +    ...| .|+ ..+++.. +.|+.+.+.+.++
T Consensus       228 A~~~L~~~~~~~~~~G~~y~itd~~p~~~~~~f~~~~~~~~G  269 (280)
T PF01073_consen  228 AAQALLEPGKPERVAGQAYFITDGEPVPSFWDFMRPLWEALG  269 (280)
T ss_pred             HHHHhccccccccCCCcEEEEECCCccCcHHHHHHHHHHHCC
Confidence            7653   2    2345 564 5567888 9999999999884

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PLN02427 UDP-apiose/xylose synthase

Probab=100.00  E-value=3e-38  Score=272.37  Aligned_cols=262  Identities=17%  Similarity=0.232  Sum_probs=193.2

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHC-CCCeEEEEecCCCCCcccccCCC-CCCCceEEEEccCCChhhHHHHhcCccEE
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPGSDSSHLFALPG-AGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~-g~~~v~~~~r~~~~~~~~~~~~~-~~~~~v~~~~~Dl~d~~~~~~~~~~~d~v   84 (278)
                      .+.|+|||||||||||++|+++|+++ |+ +|++++|+......+..... ....+++++.+|++|.+.+.++++++|+|
T Consensus        12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~-~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~V   90 (386)
T PLN02427         12 IKPLTICMIGAGGFIGSHLCEKLMTETPH-KVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMADLT   90 (386)
T ss_pred             ccCcEEEEECCcchHHHHHHHHHHhcCCC-EEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCCEE
Confidence            35679999999999999999999998 57 89999886544332221110 01127899999999999999999999999


Q ss_pred             EEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchh---------
Q 023689           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLE---------  155 (278)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~---------  155 (278)
                      ||+|+.........+....+..|+.++.+++++|++.+ ++||++||.+. |+....  .+++|+.+..+.         
T Consensus        91 iHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~-~r~v~~SS~~v-Yg~~~~--~~~~e~~p~~~~~~~~~~~e~  166 (386)
T PLN02427         91 INLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEV-YGKTIG--SFLPKDHPLRQDPAFYVLKED  166 (386)
T ss_pred             EEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC-CEEEEEeeeee-eCCCcC--CCCCccccccccccccccccc
Confidence            99998755432333445667889999999999998887 89999999665 443211  223333322110         


Q ss_pred             -------hhhccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCC----------CchhHHHHHHHhhCCC
Q 023689          156 -------YCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY----------LNASCAVLQQLLQGSK  218 (278)
Q Consensus       156 -------~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~----------~~~~~~~~~~~~~~~~  218 (278)
                             +...+.+.|+.+|.++|+++..++++++++++++||++||||.....          ...+..++..+..+.+
T Consensus       167 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  246 (386)
T PLN02427        167 ESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREP  246 (386)
T ss_pred             ccccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCC
Confidence                   00112357999999999999999888899999999999999975311          1233445566667776


Q ss_pred             Ccc---cccccCcccHHHHHHHHHhhhcCCC-C-CceEEecC--ccccHHHHHHHHHHhCCC
Q 023689          219 DTQ---EYHWLGAVPVKDVAKAQVLLFESPA-A-SGRYLCTN--GIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       219 ~~~---~~~~~~~i~~~D~a~~~~~~~~~~~-~-~~~~~~~~--~~~s~~e~~~~i~~~~~~  273 (278)
                      ..+   +.+.++++|++|+|++++.+++++. . +++|++++  +.++++|+++.+.+.++.
T Consensus       247 ~~~~g~g~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g~  308 (386)
T PLN02427        247 LKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYAK  308 (386)
T ss_pred             eEEECCCCceECcEeHHHHHHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhcc
Confidence            543   3467899999999999999998763 3 34787764  489999999999998863

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=100.00  E-value=4.5e-38  Score=268.73  Aligned_cols=255  Identities=18%  Similarity=0.204  Sum_probs=194.8

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCC-CCCceEEEEccCCChhhHHHHhcC--ccEEE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGA-GDANLRVFEADVLDSGAVSRAVEG--CKGVF   85 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~~~~~~~~--~d~vi   85 (278)
                      ||+|||||||||||+++++.|+++|++++++.++.... .....+... ...+++++.+|++|.+++.+++++  +|+||
T Consensus         1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vi   79 (355)
T PRK10217          1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYA-GNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVM   79 (355)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccc-cchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEEE
Confidence            57999999999999999999999998445444443221 111111110 112678999999999999999984  89999


Q ss_pred             EecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHh---------cCCCEEEEecceeeeecCCCCCCccccCCCCCchhh
Q 023689           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKR---------FGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEY  156 (278)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~---------~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~  156 (278)
                      |+||..........+...+++|+.++.+++++|++         .++++||++||.+. |+.......+++|+.+..+. 
T Consensus        80 h~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~v-yg~~~~~~~~~~E~~~~~p~-  157 (355)
T PRK10217         80 HLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEV-YGDLHSTDDFFTETTPYAPS-  157 (355)
T ss_pred             ECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhh-cCCCCCCCCCcCCCCCCCCC-
Confidence            99987654333445688999999999999999976         24679999998654 44322223457887765443 


Q ss_pred             hhccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcc---cccccCcccHHH
Q 023689          157 CKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ---EYHWLGAVPVKD  233 (278)
Q Consensus       157 ~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~D  233 (278)
                           +.|+.||.++|.+++.++++++++++++||+++|||..... ..+..++.+...+.++..   +++.++++|++|
T Consensus       158 -----s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~-~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D  231 (355)
T PRK10217        158 -----SPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPE-KLIPLMILNALAGKPLPVYGNGQQIRDWLYVED  231 (355)
T ss_pred             -----ChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcc-cHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHH
Confidence                 68999999999999999988999999999999999986432 355666677777765433   457899999999


Q ss_pred             HHHHHHhhhcCCCCCceEEec-CccccHHHHHHHHHHhCC
Q 023689          234 VAKAQVLLFESPAASGRYLCT-NGIYQFGDFAERVSKLFP  272 (278)
Q Consensus       234 ~a~~~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~i~~~~~  272 (278)
                      +|++++.++++...+++|+++ ++.+|++|+++.+.+.++
T Consensus       232 ~a~a~~~~~~~~~~~~~yni~~~~~~s~~~~~~~i~~~~~  271 (355)
T PRK10217        232 HARALYCVATTGKVGETYNIGGHNERKNLDVVETICELLE  271 (355)
T ss_pred             HHHHHHHHHhcCCCCCeEEeCCCCcccHHHHHHHHHHHhc
Confidence            999999999876555678665 668999999999999774

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=100.00  E-value=6.8e-38  Score=266.76  Aligned_cols=256  Identities=20%  Similarity=0.201  Sum_probs=198.6

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcC--ccEEE
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG--CKGVF   85 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~--~d~vi   85 (278)
                      ++|+||||||+||||+++++.|+++|+ +|++++|+.............. .+++++.+|++|.+++.++++.  +|+||
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi   80 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGA-EVYGYSLDPPTSPNLFELLNLA-KKIEDHFGDIRDAAKLRKAIAEFKPEIVF   80 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCC-EEEEEeCCCccchhHHHHHhhc-CCceEEEccCCCHHHHHHHHhhcCCCEEE
Confidence            468999999999999999999999999 8888888765433221111111 1677899999999999999885  69999


Q ss_pred             EecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcC-CCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchh
Q 023689           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWY  164 (278)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y  164 (278)
                      |+|+.........++...+++|+.++.+++++|++.+ +++||++||... |+.... ..+++|+++..|      .++|
T Consensus        81 h~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~v-yg~~~~-~~~~~e~~~~~p------~~~Y  152 (349)
T TIGR02622        81 HLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKC-YRNDEW-VWGYRETDPLGG------HDPY  152 (349)
T ss_pred             ECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhh-hCCCCC-CCCCccCCCCCC------CCcc
Confidence            9999655444445677899999999999999998876 789999998654 443221 134667665444      3689


Q ss_pred             hhHHHHHHHHHHHHHHhc-------CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcc--cccccCcccHHHHH
Q 023689          165 PVSKTLAEKAAWEFAEKH-------GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ--EYHWLGAVPVKDVA  235 (278)
Q Consensus       165 ~~sK~~~e~~~~~~~~~~-------~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~D~a  235 (278)
                      +.+|.++|.+++.+++++       +++++++||+.+|||........+..++.....|.++.+  +.+.++|+|++|+|
T Consensus       153 ~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~rd~i~v~D~a  232 (349)
T TIGR02622       153 SSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIRNPDATRPWQHVLEPL  232 (349)
T ss_pred             hhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEECCCCcccceeeHHHHH
Confidence            999999999999888764       899999999999999753333456777888888877665  34899999999999


Q ss_pred             HHHHhhhcCC-----CCCceEEecC---ccccHHHHHHHHHHhCCC
Q 023689          236 KAQVLLFESP-----AASGRYLCTN---GIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       236 ~~~~~~~~~~-----~~~~~~~~~~---~~~s~~e~~~~i~~~~~~  273 (278)
                      ++++.++++.     ..++.|+++.   ++.++.|+++.+.+.++.
T Consensus       233 ~a~~~~~~~~~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~~  278 (349)
T TIGR02622       233 SGYLLLAEKLFTGQAEFAGAWNFGPRASDNARVVELVVDALEFWWG  278 (349)
T ss_pred             HHHHHHHHHHhhcCccccceeeeCCCcccCcCHHHHHHHHHHHhcC
Confidence            9999887642     1245787763   589999999999987754

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN02572 UDP-sulfoquinovose synthase

Probab=100.00  E-value=6.6e-38  Score=272.77  Aligned_cols=261  Identities=19%  Similarity=0.199  Sum_probs=190.0

Q ss_pred             cccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCC---CC----ccc----------ccCCCCCCCceEEEEcc
Q 023689            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS---DS----SHL----------FALPGAGDANLRVFEAD   67 (278)
Q Consensus         5 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~---~~----~~~----------~~~~~~~~~~v~~~~~D   67 (278)
                      +.++||+||||||+||||++|+++|+++|+ +|+++++...   ..    +..          ..+......+++++.+|
T Consensus        43 ~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~D  121 (442)
T PLN02572         43 SSSKKKKVMVIGGDGYCGWATALHLSKRGY-EVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGD  121 (442)
T ss_pred             ccccCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECC
Confidence            356789999999999999999999999999 8888764211   10    000          00000001168899999


Q ss_pred             CCChhhHHHHhc--CccEEEEecccCCCCCCC---CchhhhhhhHHhHHHHHHHHHHhcCCC-EEEEecceeeeecCCCC
Q 023689           68 VLDSGAVSRAVE--GCKGVFHVASPCTLEDPV---DPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTSSISAIVPNPGW  141 (278)
Q Consensus        68 l~d~~~~~~~~~--~~d~vi~~a~~~~~~~~~---~~~~~~~~~n~~~~~~ll~~~~~~~~~-~~v~~Ss~~~~~~~~~~  141 (278)
                      ++|.+.+.++++  ++|+|||+|+........   .++...+++|+.|+.+++++|++.+++ +||++||... |+... 
T Consensus       122 l~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~v-YG~~~-  199 (442)
T PLN02572        122 ICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGE-YGTPN-  199 (442)
T ss_pred             CCCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeccee-cCCCC-
Confidence            999999999998  489999999764432211   123566789999999999999999875 8999998655 44321 


Q ss_pred             CCccccCCCCC--------chhhhhccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCC-----------
Q 023689          142 KGKVFDETSWT--------DLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY-----------  202 (278)
Q Consensus       142 ~~~~~~E~~~~--------~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~-----------  202 (278)
                        .+++|....        .+..+..+.++|+.+|.++|.+++.+++++|++++++||+++|||+....           
T Consensus       200 --~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~  277 (442)
T PLN02572        200 --IDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLD  277 (442)
T ss_pred             --CCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccC
Confidence              122322100        00011233468999999999999999989999999999999999985431           


Q ss_pred             -----CchhHHHHHHHhhCCCCcc---cccccCcccHHHHHHHHHhhhcCCCCCc---eEEecCccccHHHHHHHHHHh
Q 023689          203 -----LNASCAVLQQLLQGSKDTQ---EYHWLGAVPVKDVAKAQVLLFESPAASG---RYLCTNGIYQFGDFAERVSKL  270 (278)
Q Consensus       203 -----~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~D~a~~~~~~~~~~~~~~---~~~~~~~~~s~~e~~~~i~~~  270 (278)
                           ...+..++.+...|.++.+   +++.++|+|++|+|++++.++++....|   +|+++++.+|++|+++.+.+.
T Consensus       278 ~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nigs~~~si~el~~~i~~~  356 (442)
T PLN02572        278 YDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQFTEQFSVNELAKLVTKA  356 (442)
T ss_pred             cccchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChhhcCceeEEEeCCCceeHHHHHHHHHHH
Confidence                 1234556667777776543   3578999999999999999998653333   577777889999999999998

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=2.7e-37  Score=263.47  Aligned_cols=265  Identities=37%  Similarity=0.616  Sum_probs=191.4

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhcCccEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~v   84 (278)
                      +.++|+||||||+||||++++++|+++|+ .|+++.|+......+. .+.. . .+++++.+|++|.+++.++++++|+|
T Consensus         7 ~~~~~~vLVtG~~GfIG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~-~-~~~~~~~~Dl~~~~~~~~~~~~~d~V   83 (353)
T PLN02896          7 ESATGTYCVTGATGYIGSWLVKLLLQRGY-TVHATLRDPAKSLHLLSKWKE-G-DRLRLFRADLQEEGSFDEAVKGCDGV   83 (353)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHhhcc-C-CeEEEEECCCCCHHHHHHHHcCCCEE
Confidence            45678999999999999999999999999 8888888654332221 1111 1 27889999999999999999999999


Q ss_pred             EEecccCCCCC--CCCchhh-----hhhhHHhHHHHHHHHHHhcC-CCEEEEecceeeeecCCCC--CCccccCCCCCch
Q 023689           85 FHVASPCTLED--PVDPEKE-----LILPAVQGTLNVLEAAKRFG-VRRVVVTSSISAIVPNPGW--KGKVFDETSWTDL  154 (278)
Q Consensus        85 i~~a~~~~~~~--~~~~~~~-----~~~~n~~~~~~ll~~~~~~~-~~~~v~~Ss~~~~~~~~~~--~~~~~~E~~~~~~  154 (278)
                      ||+|+......  ...++..     .++.|+.++.+++++|++.+ +++||++||.++++..+..  ...+++|+.+...
T Consensus        84 ih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~  163 (353)
T PLN02896         84 FHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPI  163 (353)
T ss_pred             EECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcH
Confidence            99998755321  1223333     44556799999999998874 7899999997665432211  1135677633221


Q ss_pred             hh---hhccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccc----c----
Q 023689          155 EY---CKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQE----Y----  223 (278)
Q Consensus       155 ~~---~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~----~----  223 (278)
                      .+   ...+.++|+.||.++|+++..++++++++++++||+++|||............+.....|.....+    .    
T Consensus       164 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  243 (353)
T PLN02896        164 DHVWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFSILSAVNSRM  243 (353)
T ss_pred             HHhhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCcccccccccccccc
Confidence            10   122345899999999999999998899999999999999997654322111112222234322211    1    


Q ss_pred             cccCcccHHHHHHHHHhhhcCCCCCceEEecCccccHHHHHHHHHHhCCC
Q 023689          224 HWLGAVPVKDVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       224 ~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~~~  273 (278)
                      ..++|||++|+|++++.+++.+...++|++++.+++++|+++.+.+.+|.
T Consensus       244 ~~~dfi~v~Dva~a~~~~l~~~~~~~~~~~~~~~~s~~el~~~i~~~~~~  293 (353)
T PLN02896        244 GSIALVHIEDICDAHIFLMEQTKAEGRYICCVDSYDMSELINHLSKEYPC  293 (353)
T ss_pred             CceeEEeHHHHHHHHHHHHhCCCcCccEEecCCCCCHHHHHHHHHHhCCC
Confidence            24699999999999999998755556788888899999999999999864

>PLN02686 cinnamoyl-CoA reductase

Probab=100.00  E-value=1.9e-37  Score=264.75  Aligned_cols=264  Identities=30%  Similarity=0.460  Sum_probs=196.5

Q ss_pred             cccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCC-----CCCceEEEEccCCChhhHHHHhc
Q 023689            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGA-----GDANLRVFEADVLDSGAVSRAVE   79 (278)
Q Consensus         5 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-----~~~~v~~~~~Dl~d~~~~~~~~~   79 (278)
                      ...++|+||||||+||||++++++|+++|+ +|+++.|+.+....+..+...     ...+++++.+|++|.+++.++++
T Consensus        49 ~~~~~k~VLVTGatGfIG~~lv~~L~~~G~-~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~  127 (367)
T PLN02686         49 ADAEARLVCVTGGVSFLGLAIVDRLLRHGY-SVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD  127 (367)
T ss_pred             cCCCCCEEEEECCchHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHH
Confidence            356689999999999999999999999999 888877765433222221100     01157899999999999999999


Q ss_pred             CccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhc-CCCEEEEeccee-eeecCC--CCCCccccCCCCCchh
Q 023689           80 GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-GVRRVVVTSSIS-AIVPNP--GWKGKVFDETSWTDLE  155 (278)
Q Consensus        80 ~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~v~~Ss~~-~~~~~~--~~~~~~~~E~~~~~~~  155 (278)
                      ++|.|||+|+..........+....++|+.++.+++++|++. ++++||++||.+ .+|+..  .....+++|+++....
T Consensus       128 ~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~  207 (367)
T PLN02686        128 GCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDES  207 (367)
T ss_pred             hccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChh
Confidence            999999999875432211223456788999999999999986 799999999964 344321  1111346777655433


Q ss_pred             hhhccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHHHHH
Q 023689          156 YCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVA  235 (278)
Q Consensus       156 ~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  235 (278)
                      .+..+.+.|+.+|.++|.+++.+++++|++++++||++||||.......  .. +.+...+.....++..++++|++|+|
T Consensus       208 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~--~~-~~~~~~g~~~~~g~g~~~~v~V~Dva  284 (367)
T PLN02686        208 FCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNS--TA-TIAYLKGAQEMLADGLLATADVERLA  284 (367)
T ss_pred             hcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCC--hh-HHHHhcCCCccCCCCCcCeEEHHHHH
Confidence            3334456899999999999999988889999999999999997543211  11 22344454444456667899999999


Q ss_pred             HHHHhhhcCC---CCCceEEecCccccHHHHHHHHHHhCC
Q 023689          236 KAQVLLFESP---AASGRYLCTNGIYQFGDFAERVSKLFP  272 (278)
Q Consensus       236 ~~~~~~~~~~---~~~~~~~~~~~~~s~~e~~~~i~~~~~  272 (278)
                      ++++.+++..   ..+++|+++++.++++|+++.+.+.++
T Consensus       285 ~A~~~al~~~~~~~~~~~yi~~g~~~s~~e~~~~i~~~~g  324 (367)
T PLN02686        285 EAHVCVYEAMGNKTAFGRYICFDHVVSREDEAEELARQIG  324 (367)
T ss_pred             HHHHHHHhccCCCCCCCcEEEeCCCccHHHHHHHHHHHcC
Confidence            9999999852   334578888999999999999999985

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=100.00  E-value=7.2e-37  Score=279.12  Aligned_cols=257  Identities=19%  Similarity=0.289  Sum_probs=198.2

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHC-CCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhh-HHHHhcCccEE
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGA-VSRAVEGCKGV   84 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~-g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~-~~~~~~~~d~v   84 (278)
                      +.+|+|||||||||||++|+++|+++ |+ +|++++|..........     ..+++++.+|++|.+. +.++++++|+|
T Consensus       313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~-~V~~l~r~~~~~~~~~~-----~~~~~~~~gDl~d~~~~l~~~l~~~D~V  386 (660)
T PRK08125        313 KRRTRVLILGVNGFIGNHLTERLLRDDNY-EVYGLDIGSDAISRFLG-----HPRFHFVEGDISIHSEWIEYHIKKCDVV  386 (660)
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHhCCCc-EEEEEeCCchhhhhhcC-----CCceEEEeccccCcHHHHHHHhcCCCEE
Confidence            45789999999999999999999986 68 99999986643221111     1168999999998765 57788999999


Q ss_pred             EEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhh-hccCch
Q 023689           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYC-KSRKKW  163 (278)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~-~~~~~~  163 (278)
                      ||+|+..........+...+++|+.++.+++++|++.+ ++|||+||.+. |+...  ..+++|+++..+..+ ..+.+.
T Consensus       387 iHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~-~~~V~~SS~~v-yg~~~--~~~~~E~~~~~~~~p~~~p~s~  462 (660)
T PRK08125        387 LPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN-KRIIFPSTSEV-YGMCT--DKYFDEDTSNLIVGPINKQRWI  462 (660)
T ss_pred             EECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC-CeEEEEcchhh-cCCCC--CCCcCccccccccCCCCCCccc
Confidence            99999766533445567789999999999999999988 89999999654 44332  245778765321111 123357


Q ss_pred             hhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCC-------CchhHHHHHHHhhCCCCcc---cccccCcccHHH
Q 023689          164 YPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY-------LNASCAVLQQLLQGSKDTQ---EYHWLGAVPVKD  233 (278)
Q Consensus       164 y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~-------~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~D  233 (278)
                      |+.||.++|++++.++++++++++++||+++|||.....       ...+..++.++..+.++..   +.+.++++|++|
T Consensus       463 Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~D  542 (660)
T PRK08125        463 YSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRD  542 (660)
T ss_pred             hHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHHH
Confidence            999999999999999988899999999999999975431       2346677777777776543   347899999999


Q ss_pred             HHHHHHhhhcCCC--C-CceEEecC-c-cccHHHHHHHHHHhCCC
Q 023689          234 VAKAQVLLFESPA--A-SGRYLCTN-G-IYQFGDFAERVSKLFPE  273 (278)
Q Consensus       234 ~a~~~~~~~~~~~--~-~~~~~~~~-~-~~s~~e~~~~i~~~~~~  273 (278)
                      +|++++.++++..  . +++|++++ + .+|++|+++.+.+.++.
T Consensus       543 va~a~~~~l~~~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g~  587 (660)
T PRK08125        543 GIEALFRIIENKDNRCDGQIINIGNPDNEASIRELAEMLLASFEK  587 (660)
T ss_pred             HHHHHHHHHhccccccCCeEEEcCCCCCceeHHHHHHHHHHHhcc
Confidence            9999999998753  2 34687664 3 69999999999998753

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=100.00  E-value=1.4e-36  Score=258.09  Aligned_cols=252  Identities=16%  Similarity=0.153  Sum_probs=193.3

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCC--cccccCC----CCCCCceEEEEccCCChhhHHHHhcC--c
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS--SHLFALP----GAGDANLRVFEADVLDSGAVSRAVEG--C   81 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~--~~~~~~~----~~~~~~v~~~~~Dl~d~~~~~~~~~~--~   81 (278)
                      |+||||||+||||++|+++|++.|+ +|++++|+.+..  ..+..+.    .....+++++++|++|.+++.+++++  +
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~   79 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGY-EVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKP   79 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCC-EEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCC
Confidence            5899999999999999999999999 899988875421  1111111    00012689999999999999999985  6


Q ss_pred             cEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCC---EEEEecceeeeecCCCCCCccccCCCCCchhhhh
Q 023689           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR---RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCK  158 (278)
Q Consensus        82 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~---~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~  158 (278)
                      |+|||+|+..............+++|+.|+.+++++|++.+++   +||++||.+. |+...  ..+++|+.+..|.   
T Consensus        80 d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~v-yg~~~--~~~~~E~~~~~p~---  153 (343)
T TIGR01472        80 TEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSEL-YGKVQ--EIPQNETTPFYPR---  153 (343)
T ss_pred             CEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHh-hCCCC--CCCCCCCCCCCCC---
Confidence            9999999976543333445677889999999999999988753   8999998655 44332  2457787765543   


Q ss_pred             ccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCC--CchhHHHHHHHhhCCCC--cc--cccccCcccHH
Q 023689          159 SRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY--LNASCAVLQQLLQGSKD--TQ--EYHWLGAVPVK  232 (278)
Q Consensus       159 ~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~--~~~~~~~~~~~~~~~~~--~~--~~~~~~~i~~~  232 (278)
                         +.|+.||.++|.+++.+++++++++...|+.++|||.....  ...+..++.++..+.+.  ..  +++.++|+|++
T Consensus       154 ---~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~  230 (343)
T TIGR01472       154 ---SPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAK  230 (343)
T ss_pred             ---ChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeHH
Confidence               68999999999999999988899999999999999974332  12344455556566532  22  45899999999


Q ss_pred             HHHHHHHhhhcCCCCCceEEe-cCccccHHHHHHHHHHhCC
Q 023689          233 DVAKAQVLLFESPAASGRYLC-TNGIYQFGDFAERVSKLFP  272 (278)
Q Consensus       233 D~a~~~~~~~~~~~~~~~~~~-~~~~~s~~e~~~~i~~~~~  272 (278)
                      |+|++++.+++++. .+.|++ +++++|++|+++.+.+.++
T Consensus       231 D~a~a~~~~~~~~~-~~~yni~~g~~~s~~e~~~~i~~~~g  270 (343)
T TIGR01472       231 DYVEAMWLMLQQDK-PDDYVIATGETHSVREFVEVSFEYIG  270 (343)
T ss_pred             HHHHHHHHHHhcCC-CccEEecCCCceeHHHHHHHHHHHcC
Confidence            99999999988654 356755 5789999999999999886

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=100.00  E-value=3e-36  Score=276.28  Aligned_cols=257  Identities=21%  Similarity=0.229  Sum_probs=196.7

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHC--CCCeEEEEecCCC--CCcccccCCCCCCCceEEEEccCCChhhHHHHh--c
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDN--NYTSINATVFPGS--DSSHLFALPGAGDANLRVFEADVLDSGAVSRAV--E   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~--g~~~v~~~~r~~~--~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~--~   79 (278)
                      ..++|+|||||||||||++|+++|+++  ++ +|++++|...  ....+....  ...+++++.+|++|.+.+.+++  .
T Consensus         3 ~~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~-~V~~~d~~~~~~~~~~l~~~~--~~~~v~~~~~Dl~d~~~~~~~~~~~   79 (668)
T PLN02260          3 TYEPKNILITGAAGFIASHVANRLIRNYPDY-KIVVLDKLDYCSNLKNLNPSK--SSPNFKFVKGDIASADLVNYLLITE   79 (668)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHhCCCC-EEEEEeCCCccchhhhhhhcc--cCCCeEEEECCCCChHHHHHHHhhc
Confidence            356789999999999999999999998  56 7888877431  111111110  1127899999999998888765  5


Q ss_pred             CccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcC-CCEEEEecceeeeecCCCCC-CccccCCCCCchhhh
Q 023689           80 GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRRVVVTSSISAIVPNPGWK-GKVFDETSWTDLEYC  157 (278)
Q Consensus        80 ~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~v~~Ss~~~~~~~~~~~-~~~~~E~~~~~~~~~  157 (278)
                      ++|+|||+|+.........+..+.+++|+.++.+++++|++.+ +++||++||... |+..... ....+|+++..|   
T Consensus        80 ~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~v-yg~~~~~~~~~~~E~~~~~p---  155 (668)
T PLN02260         80 GIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEV-YGETDEDADVGNHEASQLLP---  155 (668)
T ss_pred             CCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHH-hCCCccccccCccccCCCCC---
Confidence            7999999999866543344556788999999999999999987 899999999655 4433211 112355554433   


Q ss_pred             hccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcc---cccccCcccHHHH
Q 023689          158 KSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ---EYHWLGAVPVKDV  234 (278)
Q Consensus       158 ~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~D~  234 (278)
                         .+.|+.+|..+|++++.++++++++++++||++|||+..... ..+..++.....+.++.+   +.+.++++|++|+
T Consensus       156 ---~~~Y~~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~-~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dv  231 (668)
T PLN02260        156 ---TNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE-KLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDV  231 (668)
T ss_pred             ---CCCcHHHHHHHHHHHHHHHHHcCCCEEEECcccccCcCCCcc-cHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHH
Confidence               368999999999999999888899999999999999986432 345566666667766544   3468999999999


Q ss_pred             HHHHHhhhcCCCCCceEEec-CccccHHHHHHHHHHhCCC
Q 023689          235 AKAQVLLFESPAASGRYLCT-NGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       235 a~~~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~i~~~~~~  273 (278)
                      |+++..++++...+++|+++ ++.++++|+++.+.+.++.
T Consensus       232 a~a~~~~l~~~~~~~vyni~~~~~~s~~el~~~i~~~~g~  271 (668)
T PLN02260        232 AEAFEVVLHKGEVGHVYNIGTKKERRVIDVAKDICKLFGL  271 (668)
T ss_pred             HHHHHHHHhcCCCCCEEEECCCCeeEHHHHHHHHHHHhCC
Confidence            99999998876666788765 6789999999999998863

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=2.9e-36  Score=261.39  Aligned_cols=251  Identities=23%  Similarity=0.286  Sum_probs=190.7

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCC-CcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~-~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      +.|||||||||||||++|+++|+++|+ +|++++|.... ......+..  ..+++++.+|+.+..     +.++|+|||
T Consensus       119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~-~V~~ldr~~~~~~~~~~~~~~--~~~~~~~~~Di~~~~-----~~~~D~ViH  190 (436)
T PLN02166        119 KRLRIVVTGGAGFVGSHLVDKLIGRGD-EVIVIDNFFTGRKENLVHLFG--NPRFELIRHDVVEPI-----LLEVDQIYH  190 (436)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCCCccHhHhhhhcc--CCceEEEECcccccc-----ccCCCEEEE
Confidence            357999999999999999999999999 89988874321 111111111  126788899997653     468999999


Q ss_pred             ecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhh
Q 023689           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPV  166 (278)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~  166 (278)
                      +|+......+..+....+++|+.|+.+++++|++.+. +||++||.++ |+...  ..+.+|+.+.... +..+.+.|+.
T Consensus       191 lAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~-r~V~~SS~~V-Yg~~~--~~p~~E~~~~~~~-p~~p~s~Yg~  265 (436)
T PLN02166        191 LACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-RFLLTSTSEV-YGDPL--EHPQKETYWGNVN-PIGERSCYDE  265 (436)
T ss_pred             CceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECcHHH-hCCCC--CCCCCccccccCC-CCCCCCchHH
Confidence            9987554333345678899999999999999999885 8999998654 44432  2456776432111 1122467999


Q ss_pred             HHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCC-CchhHHHHHHHhhCCCCcc-c--ccccCcccHHHHHHHHHhhh
Q 023689          167 SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY-LNASCAVLQQLLQGSKDTQ-E--YHWLGAVPVKDVAKAQVLLF  242 (278)
Q Consensus       167 sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~-~--~~~~~~i~~~D~a~~~~~~~  242 (278)
                      +|..+|++++.++++++++++++||+++||+..... ...+..++.++..+.++.+ +  .+.++|+|++|+|++++.++
T Consensus       266 SK~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~~  345 (436)
T PLN02166        266 GKRTAETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALM  345 (436)
T ss_pred             HHHHHHHHHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHH
Confidence            999999999999988899999999999999975432 2356677888888877654 3  36899999999999999998


Q ss_pred             cCCCCCceEEe-cCccccHHHHHHHHHHhCC
Q 023689          243 ESPAASGRYLC-TNGIYQFGDFAERVSKLFP  272 (278)
Q Consensus       243 ~~~~~~~~~~~-~~~~~s~~e~~~~i~~~~~  272 (278)
                      ++. ..|+|++ +++.+|++|+++.+.+.++
T Consensus       346 ~~~-~~giyNIgs~~~~Si~ela~~I~~~~g  375 (436)
T PLN02166        346 EGE-HVGPFNLGNPGEFTMLELAEVVKETID  375 (436)
T ss_pred             hcC-CCceEEeCCCCcEeHHHHHHHHHHHhC
Confidence            754 3467765 5678999999999999885

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=100.00  E-value=1e-35  Score=254.41  Aligned_cols=253  Identities=16%  Similarity=0.141  Sum_probs=188.9

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEe
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~   87 (278)
                      +.|+|||||||||||++|++.|.++|+ +|++++|.....  ....   .. .++++.+|++|.+.+..+++++|+|||+
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~-~V~~v~r~~~~~--~~~~---~~-~~~~~~~Dl~d~~~~~~~~~~~D~Vih~   92 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGH-YIIASDWKKNEH--MSED---MF-CHEFHLVDLRVMENCLKVTKGVDHVFNL   92 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCC-EEEEEEeccccc--cccc---cc-cceEEECCCCCHHHHHHHHhCCCEEEEc
Confidence            457999999999999999999999999 899998854321  1110   00 3578899999999999999999999999


Q ss_pred             cccCCCC-CCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCC--CCccccCCCCCchhhhhccCchh
Q 023689           88 ASPCTLE-DPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGW--KGKVFDETSWTDLEYCKSRKKWY  164 (278)
Q Consensus        88 a~~~~~~-~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~--~~~~~~E~~~~~~~~~~~~~~~y  164 (278)
                      |+..... .........+..|+.++.+++++|++.++++|||+||... |+....  ...++.|++..    +..+.+.|
T Consensus        93 Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~v-Yg~~~~~~~~~~~~E~~~~----p~~p~s~Y  167 (370)
T PLN02695         93 AADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACI-YPEFKQLETNVSLKESDAW----PAEPQDAY  167 (370)
T ss_pred             ccccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhh-cCCccccCcCCCcCcccCC----CCCCCCHH
Confidence            9865321 1122345567899999999999999999999999999655 443221  11235555421    11223689


Q ss_pred             hhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCC---CchhHHHHHHHhhC-CCCcc---cccccCcccHHHHHHH
Q 023689          165 PVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY---LNASCAVLQQLLQG-SKDTQ---EYHWLGAVPVKDVAKA  237 (278)
Q Consensus       165 ~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~---~~~~~~~~~~~~~~-~~~~~---~~~~~~~i~~~D~a~~  237 (278)
                      +.+|..+|++++.++++++++++++||+++|||.....   ...+..++.++..+ .++.+   +++.++++|++|++++
T Consensus       168 g~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~a  247 (370)
T PLN02695        168 GLEKLATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEG  247 (370)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHHH
Confidence            99999999999999888899999999999999975322   12344566665543 44333   3478999999999999


Q ss_pred             HHhhhcCCCCCceEEe-cCccccHHHHHHHHHHhCCC
Q 023689          238 QVLLFESPAASGRYLC-TNGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       238 ~~~~~~~~~~~~~~~~-~~~~~s~~e~~~~i~~~~~~  273 (278)
                      ++.++++. ..+.|++ +++.+|++|+++.+.+.++.
T Consensus       248 i~~~~~~~-~~~~~nv~~~~~~s~~el~~~i~~~~g~  283 (370)
T PLN02695        248 VLRLTKSD-FREPVNIGSDEMVSMNEMAEIALSFENK  283 (370)
T ss_pred             HHHHHhcc-CCCceEecCCCceeHHHHHHHHHHHhCC
Confidence            99987764 3456755 46789999999999988753

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=100.00  E-value=5.3e-36  Score=255.69  Aligned_cols=255  Identities=20%  Similarity=0.205  Sum_probs=191.7

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCC--CCcccccCCCCCCCceEEEEccCCChhhHHHHhc--CccEEE
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS--DSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVF   85 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~--~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vi   85 (278)
                      |||||||||||||++|+++|+++|++.|++.++...  .......+..  ..+++++.+|++|.+++.++++  ++|+||
T Consensus         1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   78 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSD--SERYVFEHADICDRAELDRIFAQHQPDAVM   78 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhccc--CCceEEEEecCCCHHHHHHHHHhcCCCEEE
Confidence            489999999999999999999999845665554321  1111111111  1267889999999999999987  489999


Q ss_pred             EecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhc---------CCCEEEEecceeeeecCCCC-------CCccccCC
Q 023689           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF---------GVRRVVVTSSISAIVPNPGW-------KGKVFDET  149 (278)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~---------~~~~~v~~Ss~~~~~~~~~~-------~~~~~~E~  149 (278)
                      |+|+..........++..+++|+.|+.+++++|++.         ++++||++||.+.+......       ...+++|+
T Consensus        79 h~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~  158 (352)
T PRK10084         79 HLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTET  158 (352)
T ss_pred             ECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCcccc
Confidence            999975543334556889999999999999999874         46689999986654321110       01235666


Q ss_pred             CCCchhhhhccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcc---ccccc
Q 023689          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ---EYHWL  226 (278)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~  226 (278)
                      ++..|      .+.|+.+|.++|.+++.++++++++++++||+.+|||..... ..+..++.....+.++..   +++.+
T Consensus       159 ~~~~p------~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~  231 (352)
T PRK10084        159 TAYAP------SSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPE-KLIPLVILNALEGKPLPIYGKGDQIR  231 (352)
T ss_pred             CCCCC------CChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCcc-chHHHHHHHHhcCCCeEEeCCCCeEE
Confidence            65444      368999999999999999888999999999999999985332 345566666666665432   45789


Q ss_pred             CcccHHHHHHHHHhhhcCCCCCceEEec-CccccHHHHHHHHHHhCCC
Q 023689          227 GAVPVKDVAKAQVLLFESPAASGRYLCT-NGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       227 ~~i~~~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~i~~~~~~  273 (278)
                      +++|++|+|++++.++++...++.|+++ ++.++++|+++.+.+.++.
T Consensus       232 ~~v~v~D~a~a~~~~l~~~~~~~~yni~~~~~~s~~~~~~~i~~~~~~  279 (352)
T PRK10084        232 DWLYVEDHARALYKVVTEGKAGETYNIGGHNEKKNLDVVLTICDLLDE  279 (352)
T ss_pred             eeEEHHHHHHHHHHHHhcCCCCceEEeCCCCcCcHHHHHHHHHHHhcc
Confidence            9999999999999998875555678665 6688999999999888753

>PLN02206 UDP-glucuronate decarboxylase

Probab=100.00  E-value=5.4e-36  Score=260.11  Aligned_cols=251  Identities=22%  Similarity=0.247  Sum_probs=188.3

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCC-CcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~-~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      ++|||||||||||||++|++.|+++|+ +|++++|.... .+......  ...+++++.+|+.++.     +.++|+|||
T Consensus       118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~-~V~~ld~~~~~~~~~~~~~~--~~~~~~~i~~D~~~~~-----l~~~D~ViH  189 (442)
T PLN02206        118 KGLRVVVTGGAGFVGSHLVDRLMARGD-SVIVVDNFFTGRKENVMHHF--SNPNFELIRHDVVEPI-----LLEVDQIYH  189 (442)
T ss_pred             CCCEEEEECcccHHHHHHHHHHHHCcC-EEEEEeCCCccchhhhhhhc--cCCceEEEECCccChh-----hcCCCEEEE
Confidence            468999999999999999999999999 88888764221 11111111  1126888999997753     467999999


Q ss_pred             ecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhh
Q 023689           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPV  166 (278)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~  166 (278)
                      +|+......+..++...+++|+.++.+++++|++.+. +||++||..+| +...  ..+.+|+.+....+ ..+.+.|+.
T Consensus       190 lAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~-r~V~~SS~~VY-g~~~--~~p~~E~~~~~~~P-~~~~s~Y~~  264 (442)
T PLN02206        190 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVY-GDPL--QHPQVETYWGNVNP-IGVRSCYDE  264 (442)
T ss_pred             eeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECChHHh-CCCC--CCCCCccccccCCC-CCccchHHH
Confidence            9987554333445678999999999999999999985 89999996554 4332  24566664321111 122367999


Q ss_pred             HHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCC-CchhHHHHHHHhhCCCCcc---cccccCcccHHHHHHHHHhhh
Q 023689          167 SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY-LNASCAVLQQLLQGSKDTQ---EYHWLGAVPVKDVAKAQVLLF  242 (278)
Q Consensus       167 sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~D~a~~~~~~~  242 (278)
                      +|.++|+++..+.++++++++++||+++|||..... ...+..++.+...+.++.+   +++.++++|++|+|++++.++
T Consensus       265 SK~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~  344 (442)
T PLN02206        265 GKRTAETLTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLM  344 (442)
T ss_pred             HHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHHHH
Confidence            999999999999888899999999999999975422 2345667777777776554   346899999999999999998


Q ss_pred             cCCCCCceEEe-cCccccHHHHHHHHHHhCC
Q 023689          243 ESPAASGRYLC-TNGIYQFGDFAERVSKLFP  272 (278)
Q Consensus       243 ~~~~~~~~~~~-~~~~~s~~e~~~~i~~~~~  272 (278)
                      ++. ..|.|++ +++.++++|+++.+.+.++
T Consensus       345 e~~-~~g~yNIgs~~~~sl~Elae~i~~~~g  374 (442)
T PLN02206        345 EGE-HVGPFNLGNPGEFTMLELAKVVQETID  374 (442)
T ss_pred             hcC-CCceEEEcCCCceeHHHHHHHHHHHhC
Confidence            764 3467765 5678999999999999873

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=100.00  E-value=5.1e-35  Score=247.32  Aligned_cols=249  Identities=31%  Similarity=0.442  Sum_probs=195.3

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEecc
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a~   89 (278)
                      |+||||||+||||+++++.|+++|+ .|+++.|+++....+..      .+++++.+|++|.+++.++++++|+|||+|+
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~------~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~   73 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGE-EVRVLVRPTSDRRNLEG------LDVEIVEGDLRDPASLRKAVAGCRALFHVAA   73 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCC-EEEEEEecCcccccccc------CCceEEEeeCCCHHHHHHHHhCCCEEEEece
Confidence            4799999999999999999999999 89999987654332221      1688999999999999999999999999997


Q ss_pred             cCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhhHHH
Q 023689           90 PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKT  169 (278)
Q Consensus        90 ~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~  169 (278)
                      ....  +...+...+++|+.++.++++++++.+++++|++||.+++.....  ..+.+|+.+..+.   ...+.|+.+|.
T Consensus        74 ~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~--~~~~~e~~~~~~~---~~~~~Y~~sK~  146 (328)
T TIGR03466        74 DYRL--WAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGD--GTPADETTPSSLD---DMIGHYKRSKF  146 (328)
T ss_pred             eccc--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCC--CCCcCccCCCCcc---cccChHHHHHH
Confidence            5432  334567889999999999999999999999999999766543222  2567777654432   22357999999


Q ss_pred             HHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHHHHHHHHHhhhcCCCCCc
Q 023689          170 LAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASG  249 (278)
Q Consensus       170 ~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~  249 (278)
                      ++|++++.++.+++++++++||+.+||+....... ...++.....+......+...+++|++|+|++++.++++...+.
T Consensus       147 ~~e~~~~~~~~~~~~~~~ilR~~~~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~  225 (328)
T TIGR03466       147 LAEQAALEMAAEKGLPVVIVNPSTPIGPRDIKPTP-TGRIIVDFLNGKMPAYVDTGLNLVHVDDVAEGHLLALERGRIGE  225 (328)
T ss_pred             HHHHHHHHHHHhcCCCEEEEeCCccCCCCCCCCCc-HHHHHHHHHcCCCceeeCCCcceEEHHHHHHHHHHHHhCCCCCc
Confidence            99999999988889999999999999997643321 22233333333333334456789999999999999998765444


Q ss_pred             eEEecCccccHHHHHHHHHHhCCC
Q 023689          250 RYLCTNGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       250 ~~~~~~~~~s~~e~~~~i~~~~~~  273 (278)
                      .|+++++.++++|+++.+.+.++.
T Consensus       226 ~~~~~~~~~s~~e~~~~i~~~~g~  249 (328)
T TIGR03466       226 RYILGGENLTLKQILDKLAEITGR  249 (328)
T ss_pred             eEEecCCCcCHHHHHHHHHHHhCC
Confidence            688888899999999999998863

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=100.00  E-value=3.2e-35  Score=249.61  Aligned_cols=254  Identities=16%  Similarity=0.141  Sum_probs=194.3

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCC--CcccccCCC---CCCCceEEEEccCCChhhHHHHhcC-
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD--SSHLFALPG---AGDANLRVFEADVLDSGAVSRAVEG-   80 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~--~~~~~~~~~---~~~~~v~~~~~Dl~d~~~~~~~~~~-   80 (278)
                      .++|+||||||+||||++|+++|++.|+ +|+++.|+...  ...+..+..   ....++.++.+|++|.+++.++++. 
T Consensus         4 ~~~~~vlVTGatGfiG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   82 (340)
T PLN02653          4 PPRKVALITGITGQDGSYLTEFLLSKGY-EVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI   82 (340)
T ss_pred             CCCCEEEEECCCCccHHHHHHHHHHCCC-EEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc
Confidence            4578999999999999999999999999 88888876532  112221110   0112688999999999999998884 


Q ss_pred             -ccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCC-----EEEEecceeeeecCCCCCCccccCCCCCch
Q 023689           81 -CKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-----RVVVTSSISAIVPNPGWKGKVFDETSWTDL  154 (278)
Q Consensus        81 -~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~-----~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~  154 (278)
                       +|+|||+|+..........+...+++|+.|+.+++++|++.+++     +||++||.+. |+...   .+++|+.+..|
T Consensus        83 ~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~v-yg~~~---~~~~E~~~~~p  158 (340)
T PLN02653         83 KPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEM-YGSTP---PPQSETTPFHP  158 (340)
T ss_pred             CCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHH-hCCCC---CCCCCCCCCCC
Confidence             69999999976543334456777899999999999999988765     8999998554 44332   26778776554


Q ss_pred             hhhhccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCC--CchhHHHHHHHhhCCCCcc----cccccCc
Q 023689          155 EYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY--LNASCAVLQQLLQGSKDTQ----EYHWLGA  228 (278)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~--~~~~~~~~~~~~~~~~~~~----~~~~~~~  228 (278)
                      .      +.|+.||.++|.+++.++.+++++++..|+.++|||.....  ...+..++..+..+.+...    +++.+++
T Consensus       159 ~------~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~  232 (340)
T PLN02653        159 R------SPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDW  232 (340)
T ss_pred             C------ChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecc
Confidence            3      68999999999999999988999999999999999964432  1223344445556654322    3578999


Q ss_pred             ccHHHHHHHHHhhhcCCCCCceEE-ecCccccHHHHHHHHHHhCC
Q 023689          229 VPVKDVAKAQVLLFESPAASGRYL-CTNGIYQFGDFAERVSKLFP  272 (278)
Q Consensus       229 i~~~D~a~~~~~~~~~~~~~~~~~-~~~~~~s~~e~~~~i~~~~~  272 (278)
                      +|++|+|++++.++++.. .+.|+ .+++++|++|+++.+.+.++
T Consensus       233 i~v~D~a~a~~~~~~~~~-~~~yni~~g~~~s~~e~~~~i~~~~g  276 (340)
T PLN02653        233 GFAGDYVEAMWLMLQQEK-PDDYVVATEESHTVEEFLEEAFGYVG  276 (340)
T ss_pred             eeHHHHHHHHHHHHhcCC-CCcEEecCCCceeHHHHHHHHHHHcC
Confidence            999999999999998753 35675 45778999999999999885

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=100.00  E-value=5.6e-35  Score=245.58  Aligned_cols=247  Identities=29%  Similarity=0.360  Sum_probs=198.2

Q ss_pred             eEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCc-cEEEEecc
Q 023689           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGC-KGVFHVAS   89 (278)
Q Consensus        11 ~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~-d~vi~~a~   89 (278)
                      +|||||||||||++|+++|++.|+ +|++++|.........       ..+.++.+|++|.+.+.+.++.+ |+|||+|+
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~~~d~vih~aa   73 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAAGH-DVRGLDRLRDGLDPLL-------SGVEFVVLDLTDRDLVDELAKGVPDAVIHLAA   73 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhCCC-eEEEEeCCCccccccc-------cccceeeecccchHHHHHHHhcCCCEEEEccc
Confidence            499999999999999999999999 9999999776554433       17889999999998888888888 99999999


Q ss_pred             cCCCCCCCC-chhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCC-CCCchhhhhccCchhhhH
Q 023689           90 PCTLEDPVD-PEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDET-SWTDLEYCKSRKKWYPVS  167 (278)
Q Consensus        90 ~~~~~~~~~-~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~-~~~~~~~~~~~~~~y~~s  167 (278)
                      ......... ++...+.+|+.++.+++++|++.++++||+.||.+.++.. . ...+++|+ .+..|.      +.|+.+
T Consensus        74 ~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~-~-~~~~~~E~~~~~~p~------~~Yg~s  145 (314)
T COG0451          74 QSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGD-P-PPLPIDEDLGPPRPL------NPYGVS  145 (314)
T ss_pred             cCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCC-C-CCCCcccccCCCCCC------CHHHHH
Confidence            876533222 3456899999999999999999999999997776666654 2 23478887 343332      479999


Q ss_pred             HHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCC--chhHHHHHHHhhCCC-Cccc---ccccCcccHHHHHHHHHhh
Q 023689          168 KTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL--NASCAVLQQLLQGSK-DTQE---YHWLGAVPVKDVAKAQVLL  241 (278)
Q Consensus       168 K~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~--~~~~~~~~~~~~~~~-~~~~---~~~~~~i~~~D~a~~~~~~  241 (278)
                      |.++|+++..+.+.++++++++||+++|||......  .....++.....+.+ ....   ...++++|++|++++++.+
T Consensus       146 K~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  225 (314)
T COG0451         146 KLAAEQLLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLA  225 (314)
T ss_pred             HHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHH
Confidence            999999999999888999999999999999876642  234445555666766 3332   3568999999999999999


Q ss_pred             hcCCCCCceEEecCc--cccHHHHHHHHHHhCCCC
Q 023689          242 FESPAASGRYLCTNG--IYQFGDFAERVSKLFPEF  274 (278)
Q Consensus       242 ~~~~~~~~~~~~~~~--~~s~~e~~~~i~~~~~~~  274 (278)
                      ++++... .|+++++  ..+++|+++.+.+.++..
T Consensus       226 ~~~~~~~-~~ni~~~~~~~~~~e~~~~~~~~~~~~  259 (314)
T COG0451         226 LENPDGG-VFNIGSGTAEITVRELAEAVAEAVGSK  259 (314)
T ss_pred             HhCCCCc-EEEeCCCCCcEEHHHHHHHHHHHhCCC
Confidence            9987766 8877654  799999999999988643

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=4.7e-35  Score=246.32  Aligned_cols=252  Identities=20%  Similarity=0.223  Sum_probs=194.3

Q ss_pred             eEEEeCcchhhHHHHHHHHHHCCC-CeEEEEecCCC--CCcccccCCCCCCCceEEEEccCCChhhHHHHhcC--ccEEE
Q 023689           11 TVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGS--DSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG--CKGVF   85 (278)
Q Consensus        11 ~vlItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~--~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~--~d~vi   85 (278)
                      +|||||||||||++++++|++.|. .+|+++.|...  ..+.+..+.. . .+++++.+|++|++++.+++++  +|+||
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi   78 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLED-N-PRYRFVKGDIGDRELVSRLFTEHQPDAVV   78 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhcc-C-CCcEEEEcCCcCHHHHHHHHhhcCCCEEE
Confidence            589999999999999999999872 27887766321  1111222211 1 2688999999999999999987  89999


Q ss_pred             EecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCC-EEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchh
Q 023689           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWY  164 (278)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~-~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y  164 (278)
                      |+|+..........+...+++|+.++.+++++|++.+.+ ++|++||...+.....  ..+++|.++..+      .+.|
T Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~--~~~~~e~~~~~~------~~~Y  150 (317)
T TIGR01181        79 HFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEK--GDAFTETTPLAP------SSPY  150 (317)
T ss_pred             EcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCC--CCCcCCCCCCCC------CCch
Confidence            999876543334456788999999999999999887543 8999998665433222  125777765544      2689


Q ss_pred             hhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcc---cccccCcccHHHHHHHHHhh
Q 023689          165 PVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ---EYHWLGAVPVKDVAKAQVLL  241 (278)
Q Consensus       165 ~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~D~a~~~~~~  241 (278)
                      +.+|..+|.+++.++.+.+++++++||+.+||+..... ..+..++.+...+.++..   +++.++++|++|+|+++..+
T Consensus       151 ~~sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~  229 (317)
T TIGR01181       151 SASKAASDHLVRAYHRTYGLPALITRCSNNYGPYQFPE-KLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLV  229 (317)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCcc-cHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHH
Confidence            99999999999999888899999999999999975432 355667777777765443   34688999999999999999


Q ss_pred             hcCCCCCceEEe-cCccccHHHHHHHHHHhCCC
Q 023689          242 FESPAASGRYLC-TNGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       242 ~~~~~~~~~~~~-~~~~~s~~e~~~~i~~~~~~  273 (278)
                      +++...+++|++ +++.++++|+++.+.+.++.
T Consensus       230 ~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~~  262 (317)
T TIGR01181       230 LEKGRVGETYNIGGGNERTNLEVVETILELLGK  262 (317)
T ss_pred             HcCCCCCceEEeCCCCceeHHHHHHHHHHHhCC
Confidence            987655567866 56789999999999999864

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=100.00  E-value=3.4e-35  Score=247.26  Aligned_cols=235  Identities=19%  Similarity=0.155  Sum_probs=182.9

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCC--CCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNN--YTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g--~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      ++|+||||||+||||++++++|+++|  + .|++++|+......+..... . .+++++.+|++|++++.++++++|+||
T Consensus         3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~-~V~~~~r~~~~~~~~~~~~~-~-~~~~~v~~Dl~d~~~l~~~~~~iD~Vi   79 (324)
T TIGR03589         3 NNKSILITGGTGSFGKAFISRLLENYNPK-KIIIYSRDELKQWEMQQKFP-A-PCLRFFIGDVRDKERLTRALRGVDYVV   79 (324)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhCCCc-EEEEEcCChhHHHHHHHHhC-C-CcEEEEEccCCCHHHHHHHHhcCCEEE
Confidence            46899999999999999999999986  5 78888876543222211111 1 268899999999999999999999999


Q ss_pred             EecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhh
Q 023689           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYP  165 (278)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~  165 (278)
                      |+||.........++...+++|+.|+.+++++|++.++++||++||.....                 |      .++|+
T Consensus        80 h~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~~~-----------------p------~~~Y~  136 (324)
T TIGR03589        80 HAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKAAN-----------------P------INLYG  136 (324)
T ss_pred             ECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCCC-----------------C------CCHHH
Confidence            999975443334455789999999999999999999989999999843210                 1      15799


Q ss_pred             hHHHHHHHHHHHHH---HhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCC-CCcc--cccccCcccHHHHHHHHH
Q 023689          166 VSKTLAEKAAWEFA---EKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGS-KDTQ--EYHWLGAVPVKDVAKAQV  239 (278)
Q Consensus       166 ~sK~~~e~~~~~~~---~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~i~~~D~a~~~~  239 (278)
                      .+|.++|.++..++   .++|++++++||+++||+..    ..+..+......+. +..+  +.+.++|+|++|+|++++
T Consensus       137 ~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~----~~i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~  212 (324)
T TIGR03589       137 ATKLASDKLFVAANNISGSKGTRFSVVRYGNVVGSRG----SVVPFFKSLKEEGVTELPITDPRMTRFWITLEQGVNFVL  212 (324)
T ss_pred             HHHHHHHHHHHHHHhhccccCcEEEEEeecceeCCCC----CcHHHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHHHH
Confidence            99999999987754   35699999999999999863    24455555555554 3333  446789999999999999


Q ss_pred             hhhcCCCCCceEEecCccccHHHHHHHHHHhCC
Q 023689          240 LLFESPAASGRYLCTNGIYQFGDFAERVSKLFP  272 (278)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~~  272 (278)
                      .++++...+.+|+.++..+++.|+++.+.+..+
T Consensus       213 ~al~~~~~~~~~~~~~~~~sv~el~~~i~~~~~  245 (324)
T TIGR03589       213 KSLERMLGGEIFVPKIPSMKITDLAEAMAPECP  245 (324)
T ss_pred             HHHhhCCCCCEEccCCCcEEHHHHHHHHHhhCC
Confidence            999875333467766778999999999998764

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=100.00  E-value=1.2e-35  Score=239.79  Aligned_cols=228  Identities=29%  Similarity=0.365  Sum_probs=187.5

Q ss_pred             EEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCc--cEEEEecc
Q 023689           12 VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGC--KGVFHVAS   89 (278)
Q Consensus        12 vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~--d~vi~~a~   89 (278)
                      |||||||||||++++++|+++|+ .|+.+.|+...........     +++++.+|+.|.+.+.+++++.  |+|||+|+
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~-----~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~   74 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGH-EVIVLSRSSNSESFEEKKL-----NVEFVIGDLTDKEQLEKLLEKANIDVVIHLAA   74 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTT-EEEEEESCSTGGHHHHHHT-----TEEEEESETTSHHHHHHHHHHHTESEEEEEBS
T ss_pred             EEEEccCCHHHHHHHHHHHHcCC-ccccccccccccccccccc-----eEEEEEeeccccccccccccccCceEEEEeec
Confidence            79999999999999999999999 7888888776543322110     7899999999999999999865  99999998


Q ss_pred             cCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhhHHH
Q 023689           90 PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKT  169 (278)
Q Consensus        90 ~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~  169 (278)
                      ..............++.|+.++.+++++|++.+++++|++||. ..|+...  ..+++|+++..+.      +.|+.+|.
T Consensus        75 ~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~-~~y~~~~--~~~~~e~~~~~~~------~~Y~~~K~  145 (236)
T PF01370_consen   75 FSSNPESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSA-SVYGDPD--GEPIDEDSPINPL------SPYGASKR  145 (236)
T ss_dssp             SSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEG-GGGTSSS--SSSBETTSGCCHS------SHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccc-ccccccc--ccccccccccccc------cccccccc
Confidence            7532112245678899999999999999999999999999984 4455442  3778888877553      67999999


Q ss_pred             HHHHHHHHHHHhcCCceEEEecceeeCCC--CCCCCchhHHHHHHHhhCCCCcc---cccccCcccHHHHHHHHHhhhcC
Q 023689          170 LAEKAAWEFAEKHGVDVVAIHPATCLGPL--MQPYLNASCAVLQQLLQGSKDTQ---EYHWLGAVPVKDVAKAQVLLFES  244 (278)
Q Consensus       170 ~~e~~~~~~~~~~~~~~~~lrp~~i~g~~--~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~D~a~~~~~~~~~  244 (278)
                      .+|++++.+.++++++++++||+.+||+.  ..........++.++..+.+...   +++.++++|++|+|++++.++++
T Consensus       146 ~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  225 (236)
T PF01370_consen  146 AAEELLRDYAKKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALEN  225 (236)
T ss_dssp             HHHHHHHHHHHHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhC
Confidence            99999999999899999999999999999  12223567788889988887555   45899999999999999999999


Q ss_pred             CC-CCceEEec
Q 023689          245 PA-ASGRYLCT  254 (278)
Q Consensus       245 ~~-~~~~~~~~  254 (278)
                      +. .+++|+++
T Consensus       226 ~~~~~~~yNig  236 (236)
T PF01370_consen  226 PKAAGGIYNIG  236 (236)
T ss_dssp             SCTTTEEEEES
T ss_pred             CCCCCCEEEeC
Confidence            88 56688764

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=100.00  E-value=1.5e-34  Score=240.77  Aligned_cols=225  Identities=17%  Similarity=0.137  Sum_probs=173.5

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc--CccEEEEe
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFHV   87 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vi~~   87 (278)
                      |+||||||+||||++|+++|+++|  +|++++|...                 .+.+|++|.+.+.++++  ++|+|||+
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g--~V~~~~~~~~-----------------~~~~Dl~d~~~~~~~~~~~~~D~Vih~   61 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG--NLIALDVHST-----------------DYCGDFSNPEGVAETVRKIRPDVIVNA   61 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC--CEEEeccccc-----------------cccCCCCCHHHHHHHHHhcCCCEEEEC
Confidence            489999999999999999999998  3666766421                 23489999999999988  58999999


Q ss_pred             cccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhhH
Q 023689           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVS  167 (278)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~s  167 (278)
                      |+......+..++...+.+|+.++.+++++|++.+. +||++||..++ +...  ..+++|+++..|.      +.|+.+
T Consensus        62 Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g~-~~v~~Ss~~Vy-~~~~--~~p~~E~~~~~P~------~~Yg~s  131 (299)
T PRK09987         62 AAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGA-WVVHYSTDYVF-PGTG--DIPWQETDATAPL------NVYGET  131 (299)
T ss_pred             CccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEccceEE-CCCC--CCCcCCCCCCCCC------CHHHHH
Confidence            998776555566778889999999999999999985 79999986654 3322  2578888876553      689999


Q ss_pred             HHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcc-cc----cccCcccHHHHHHHHHhhh
Q 023689          168 KTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ-EY----HWLGAVPVKDVAKAQVLLF  242 (278)
Q Consensus       168 K~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~i~~~D~a~~~~~~~  242 (278)
                      |.++|+++..+    ..+.+++||+++|||...   .+...++.....+.++.+ ++    +.+.+.+++|+++++..++
T Consensus       132 K~~~E~~~~~~----~~~~~ilR~~~vyGp~~~---~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~~  204 (299)
T PRK09987        132 KLAGEKALQEH----CAKHLIFRTSWVYAGKGN---NFAKTMLRLAKEREELSVINDQFGAPTGAELLADCTAHAIRVAL  204 (299)
T ss_pred             HHHHHHHHHHh----CCCEEEEecceecCCCCC---CHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHHhh
Confidence            99999998754    456799999999999653   245566666666665543 33    3344566777888888777


Q ss_pred             cCCCCCceEEe-cCccccHHHHHHHHHHh
Q 023689          243 ESPAASGRYLC-TNGIYQFGDFAERVSKL  270 (278)
Q Consensus       243 ~~~~~~~~~~~-~~~~~s~~e~~~~i~~~  270 (278)
                      ......|+|++ +++.+|+.|+++.|.+.
T Consensus       205 ~~~~~~giyni~~~~~~s~~e~~~~i~~~  233 (299)
T PRK09987        205 NKPEVAGLYHLVASGTTTWHDYAALVFEE  233 (299)
T ss_pred             ccCCCCCeEEeeCCCCccHHHHHHHHHHH
Confidence            65444578865 56789999999999775

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=100.00  E-value=1.1e-34  Score=225.85  Aligned_cols=251  Identities=24%  Similarity=0.313  Sum_probs=207.4

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEec-CCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVF-PGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r-~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      +.++|+||||+||||+||+++|..+|+ .|++++. .......+....+.  .+++.+..|+..+     ++..+|.|+|
T Consensus        26 ~~lrI~itGgaGFIgSHLvdkLm~egh-~VIa~Dn~ftg~k~n~~~~~~~--~~fel~~hdv~~p-----l~~evD~Iyh   97 (350)
T KOG1429|consen   26 QNLRILITGGAGFIGSHLVDKLMTEGH-EVIALDNYFTGRKENLEHWIGH--PNFELIRHDVVEP-----LLKEVDQIYH   97 (350)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHhcCC-eEEEEecccccchhhcchhccC--cceeEEEeechhH-----HHHHhhhhhh
Confidence            468999999999999999999999998 8888875 22223333332221  2777788887654     7889999999


Q ss_pred             ecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhh
Q 023689           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPV  166 (278)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~  166 (278)
                      +|+..++......+...+.+|+.++.+++-.|++.+ ++|++.|| +.+|+.+..  .+..|+.|..-. +..+.+.|..
T Consensus        98 LAapasp~~y~~npvktIktN~igtln~lglakrv~-aR~l~aST-seVYgdp~~--hpq~e~ywg~vn-pigpr~cyde  172 (350)
T KOG1429|consen   98 LAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARFLLAST-SEVYGDPLV--HPQVETYWGNVN-PIGPRSCYDE  172 (350)
T ss_pred             hccCCCCcccccCccceeeecchhhHHHHHHHHHhC-ceEEEeec-ccccCCccc--CCCccccccccC-cCCchhhhhH
Confidence            999988876677788999999999999999999998 79999997 677777653  666666665442 3556678999


Q ss_pred             HHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCC-CchhHHHHHHHhhCCCCcc---cccccCcccHHHHHHHHHhhh
Q 023689          167 SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY-LNASCAVLQQLLQGSKDTQ---EYHWLGAVPVKDVAKAQVLLF  242 (278)
Q Consensus       167 sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~D~a~~~~~~~  242 (278)
                      .|..+|.+...+.++.|+.+.|.|+.++|||..... ......++.+.+++.|+.+   +.+.|+|.+++|+++++++++
T Consensus       173 gKr~aE~L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Vegll~Lm  252 (350)
T KOG1429|consen  173 GKRVAETLCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEGLLRLM  252 (350)
T ss_pred             HHHHHHHHHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHHHHHHh
Confidence            999999999999999999999999999999987655 3456778888899999887   458999999999999999999


Q ss_pred             cCCCCCceEEecCccccHHHHHHHHHHhC
Q 023689          243 ESPAASGRYLCTNGIYQFGDFAERVSKLF  271 (278)
Q Consensus       243 ~~~~~~~~~~~~~~~~s~~e~~~~i~~~~  271 (278)
                      +++....+++.+++.+|+.|+++.+.+..
T Consensus       253 ~s~~~~pvNiGnp~e~Tm~elAemv~~~~  281 (350)
T KOG1429|consen  253 ESDYRGPVNIGNPGEFTMLELAEMVKELI  281 (350)
T ss_pred             cCCCcCCcccCCccceeHHHHHHHHHHHc
Confidence            99877667788889999999999999987

>PLN02240 UDP-glucose 4-epimerase

Probab=100.00  E-value=4.5e-34  Score=243.86  Aligned_cols=256  Identities=19%  Similarity=0.188  Sum_probs=190.3

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCc----ccccCCCCCCCceEEEEccCCChhhHHHHhc--C
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS----HLFALPGAGDANLRVFEADVLDSGAVSRAVE--G   80 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~----~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~   80 (278)
                      +++|+|||||||||||++|+++|++.|+ +|++++|......    .+.........+++++.+|++|++.+.++++  +
T Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~   81 (352)
T PLN02240          3 LMGRTILVTGGAGYIGSHTVLQLLLAGY-KVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTR   81 (352)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCC
Confidence            4468999999999999999999999999 8888876432211    1111111011168899999999999999886  6


Q ss_pred             ccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhcc
Q 023689           81 CKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSR  160 (278)
Q Consensus        81 ~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  160 (278)
                      +|+|||+|+........+.+...+++|+.++.+++++|++.++++||++||.. +|+...  ..+++|+.+..+.     
T Consensus        82 ~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~-vyg~~~--~~~~~E~~~~~~~-----  153 (352)
T PLN02240         82 FDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSAT-VYGQPE--EVPCTEEFPLSAT-----  153 (352)
T ss_pred             CCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHH-HhCCCC--CCCCCCCCCCCCC-----
Confidence            89999999875443334567789999999999999999998989999999854 454332  3568888766553     


Q ss_pred             CchhhhHHHHHHHHHHHHHHh-cCCceEEEecceeeCCCCCC--------CCchhHHHHHHHhhCCCCc-----------
Q 023689          161 KKWYPVSKTLAEKAAWEFAEK-HGVDVVAIHPATCLGPLMQP--------YLNASCAVLQQLLQGSKDT-----------  220 (278)
Q Consensus       161 ~~~y~~sK~~~e~~~~~~~~~-~~~~~~~lrp~~i~g~~~~~--------~~~~~~~~~~~~~~~~~~~-----------  220 (278)
                       +.|+.+|.++|++++.+++. .+++++++|++++||+....        ....+..++.+...+....           
T Consensus       154 -~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  232 (352)
T PLN02240        154 -NPYGRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTK  232 (352)
T ss_pred             -CHHHHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCC
Confidence             68999999999999988754 58999999999999974321        1112233444444443211           


Q ss_pred             ccccccCcccHHHHHHHHHhhhcCC----CCC-ceEEe-cCccccHHHHHHHHHHhCC
Q 023689          221 QEYHWLGAVPVKDVAKAQVLLFESP----AAS-GRYLC-TNGIYQFGDFAERVSKLFP  272 (278)
Q Consensus       221 ~~~~~~~~i~~~D~a~~~~~~~~~~----~~~-~~~~~-~~~~~s~~e~~~~i~~~~~  272 (278)
                      .+.+.++++|++|+|++++.++++.    ... ++|++ +++++|++|+++.+.+.++
T Consensus       233 ~g~~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g  290 (352)
T PLN02240        233 DGTGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEKASG  290 (352)
T ss_pred             CCCEEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCcEeHHHHHHHHHHHhC
Confidence            2347899999999999998888642    222 47865 5789999999999999885

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=100.00  E-value=2.7e-34  Score=240.77  Aligned_cols=237  Identities=19%  Similarity=0.213  Sum_probs=172.3

Q ss_pred             EEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCCh---hh-HHHHhc-----Ccc
Q 023689           12 VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS---GA-VSRAVE-----GCK   82 (278)
Q Consensus        12 vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~---~~-~~~~~~-----~~d   82 (278)
                      |||||||||||++|+++|+++|+ .++++.|+.......          ..+..+|+.|.   +. +.++++     ++|
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~-~~v~~~~~~~~~~~~----------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d   70 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGI-TDILVVDNLKDGTKF----------VNLVDLDIADYMDKEDFLAQIMAGDDFGDIE   70 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCC-ceEEEecCCCcchHH----------HhhhhhhhhhhhhHHHHHHHHhcccccCCcc
Confidence            79999999999999999999998 555555543321110          11233555554   33 233332     689


Q ss_pred             EEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCc
Q 023689           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK  162 (278)
Q Consensus        83 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  162 (278)
                      +|||+|+......  .+....++.|+.++.+++++|++.++ +||++||.+. |+...  ..+.+|+.+..|.      +
T Consensus        71 ~Vih~A~~~~~~~--~~~~~~~~~n~~~t~~ll~~~~~~~~-~~i~~SS~~v-yg~~~--~~~~~E~~~~~p~------~  138 (308)
T PRK11150         71 AIFHEGACSSTTE--WDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAAT-YGGRT--DDFIEEREYEKPL------N  138 (308)
T ss_pred             EEEECceecCCcC--CChHHHHHHHHHHHHHHHHHHHHcCC-cEEEEcchHH-hCcCC--CCCCccCCCCCCC------C
Confidence            9999998644321  23456799999999999999999886 6999998665 44332  1356676655443      6


Q ss_pred             hhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCC---chhHHHHHHHhhCCCCc-c-c--ccccCcccHHHHH
Q 023689          163 WYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL---NASCAVLQQLLQGSKDT-Q-E--YHWLGAVPVKDVA  235 (278)
Q Consensus       163 ~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~---~~~~~~~~~~~~~~~~~-~-~--~~~~~~i~~~D~a  235 (278)
                      .|+.+|.++|+.++.++.+++++++++||+++||+......   .....+..++..+.++. . +  +..++++|++|+|
T Consensus       139 ~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a  218 (308)
T PRK11150        139 VYGYSKFLFDEYVRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVA  218 (308)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHH
Confidence            89999999999999998888999999999999999764421   12234445666665432 2 2  3579999999999


Q ss_pred             HHHHhhhcCCCCCceEEe-cCccccHHHHHHHHHHhCC
Q 023689          236 KAQVLLFESPAASGRYLC-TNGIYQFGDFAERVSKLFP  272 (278)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~-~~~~~s~~e~~~~i~~~~~  272 (278)
                      ++++.++++.. .++|++ +++++|+.|+++.+.+.++
T Consensus       219 ~a~~~~~~~~~-~~~yni~~~~~~s~~el~~~i~~~~~  255 (308)
T PRK11150        219 AVNLWFWENGV-SGIFNCGTGRAESFQAVADAVLAYHK  255 (308)
T ss_pred             HHHHHHHhcCC-CCeEEcCCCCceeHHHHHHHHHHHhC
Confidence            99999987643 467876 4668999999999999875

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=100.00  E-value=2.2e-33  Score=233.10  Aligned_cols=226  Identities=21%  Similarity=0.211  Sum_probs=180.4

Q ss_pred             eEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCc--cEEEEec
Q 023689           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGC--KGVFHVA   88 (278)
Q Consensus        11 ~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~--d~vi~~a   88 (278)
                      +|||||||||||++++++|+++|+ +|++++|.                     .+|+.|.+++.++++++  |+|||+|
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~-~v~~~~r~---------------------~~d~~~~~~~~~~~~~~~~d~vi~~a   58 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGR-VVVALTSS---------------------QLDLTDPEALERLLRAIRPDAVVNTA   58 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCC-EEEEeCCc---------------------ccCCCCHHHHHHHHHhCCCCEEEECC
Confidence            589999999999999999999999 89888774                     27999999999999865  9999999


Q ss_pred             ccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhhHH
Q 023689           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK  168 (278)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK  168 (278)
                      +..............+++|+.++.+++++|++.+. +||++||.+.+.+ ..  ..+++|+++..+.      +.|+.+|
T Consensus        59 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~Ss~~vy~~-~~--~~~~~E~~~~~~~------~~Y~~~K  128 (287)
T TIGR01214        59 AYTDVDGAESDPEKAFAVNALAPQNLARAAARHGA-RLVHISTDYVFDG-EG--KRPYREDDATNPL------NVYGQSK  128 (287)
T ss_pred             ccccccccccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeeeeecC-CC--CCCCCCCCCCCCc------chhhHHH
Confidence            87554333345677899999999999999998875 8999998655433 22  3568888765443      6899999


Q ss_pred             HHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcc-cccccCcccHHHHHHHHHhhhcCC-C
Q 023689          169 TLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ-EYHWLGAVPVKDVAKAQVLLFESP-A  246 (278)
Q Consensus       169 ~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~D~a~~~~~~~~~~-~  246 (278)
                      ..+|..++.    .+.+++++||+.+||+....  .+...++.....+.+... +++.++++|++|+|+++..++.++ .
T Consensus       129 ~~~E~~~~~----~~~~~~ilR~~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~  202 (287)
T TIGR01214       129 LAGEQAIRA----AGPNALIVRTSWLYGGGGGR--NFVRTMLRLAGRGEELRVVDDQIGSPTYAKDLARVIAALLQRLAR  202 (287)
T ss_pred             HHHHHHHHH----hCCCeEEEEeeecccCCCCC--CHHHHHHHHhhcCCCceEecCCCcCCcCHHHHHHHHHHHHhhccC
Confidence            999998874    37899999999999998432  244555666665555443 557889999999999999999876 3


Q ss_pred             CCceEE-ecCccccHHHHHHHHHHhCCCC
Q 023689          247 ASGRYL-CTNGIYQFGDFAERVSKLFPEF  274 (278)
Q Consensus       247 ~~~~~~-~~~~~~s~~e~~~~i~~~~~~~  274 (278)
                      ..++|+ ++++.+++.|+++.+.+.++..
T Consensus       203 ~~~~~ni~~~~~~s~~e~~~~i~~~~~~~  231 (287)
T TIGR01214       203 ARGVYHLANSGQCSWYEFAQAIFEEAGAD  231 (287)
T ss_pred             CCCeEEEECCCCcCHHHHHHHHHHHhCcc
Confidence            456775 5577899999999999998643

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=100.00  E-value=1.4e-33  Score=239.59  Aligned_cols=254  Identities=18%  Similarity=0.157  Sum_probs=184.8

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcc-cccCCCCCCCceEEEEccCCChhhHHHHhc--CccEEEE
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSH-LFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFH   86 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~-~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vi~   86 (278)
                      |+|||||||||||++|+++|+++|+ +|++++|....... ...+......++.++.+|++|++++.++++  ++|+|||
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh   79 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQNGH-DVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIH   79 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEE
Confidence            5899999999999999999999999 88887664322211 111111111257788999999999999886  5899999


Q ss_pred             ecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhh
Q 023689           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPV  166 (278)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~  166 (278)
                      +|+..............+++|+.++.+++++|+++++++||++||... |+...  ..+++|+++...     +.+.|+.
T Consensus        80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~-yg~~~--~~~~~E~~~~~~-----p~~~Y~~  151 (338)
T PRK10675         80 FAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATV-YGDQP--KIPYVESFPTGT-----PQSPYGK  151 (338)
T ss_pred             CCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHh-hCCCC--CCccccccCCCC-----CCChhHH
Confidence            998754322234456789999999999999999999999999998654 44332  256788776421     1368999


Q ss_pred             HHHHHHHHHHHHHHhc-CCceEEEecceeeCCCCCCC--------CchhHHHHHHHhhCC-C-C---------ccccccc
Q 023689          167 SKTLAEKAAWEFAEKH-GVDVVAIHPATCLGPLMQPY--------LNASCAVLQQLLQGS-K-D---------TQEYHWL  226 (278)
Q Consensus       167 sK~~~e~~~~~~~~~~-~~~~~~lrp~~i~g~~~~~~--------~~~~~~~~~~~~~~~-~-~---------~~~~~~~  226 (278)
                      +|.++|++++.+++.. +++++++|++.+||+.....        ...+...+.++..+. + +         ..+.+.+
T Consensus       152 sK~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  231 (338)
T PRK10675        152 SKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVR  231 (338)
T ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCcEEE
Confidence            9999999999987654 89999999999999742111        111223344444332 1 1         1134679


Q ss_pred             CcccHHHHHHHHHhhhcCC--CCC-ceEEec-CccccHHHHHHHHHHhCC
Q 023689          227 GAVPVKDVAKAQVLLFESP--AAS-GRYLCT-NGIYQFGDFAERVSKLFP  272 (278)
Q Consensus       227 ~~i~~~D~a~~~~~~~~~~--~~~-~~~~~~-~~~~s~~e~~~~i~~~~~  272 (278)
                      +++|++|+|++++.++++.  ... ++|+++ ++.+|++|+++.+.+.++
T Consensus       232 ~~v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g  281 (338)
T PRK10675        232 DYIHVMDLADGHVAAMEKLANKPGVHIYNLGAGVGSSVLDVVNAFSKACG  281 (338)
T ss_pred             eeEEHHHHHHHHHHHHHhhhccCCCceEEecCCCceeHHHHHHHHHHHhC
Confidence            9999999999999998752  222 468664 678999999999999885

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=100.00  E-value=1.1e-33  Score=237.03  Aligned_cols=235  Identities=19%  Similarity=0.205  Sum_probs=177.0

Q ss_pred             EEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc--CccEEEEeccc
Q 023689           13 CVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFHVASP   90 (278)
Q Consensus        13 lItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vi~~a~~   90 (278)
                      ||||||||||++|+++|++.|+ .|++..+.                    ..+|++|.+++.++++  ++|+|||+|+.
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~-~v~~~~~~--------------------~~~Dl~~~~~l~~~~~~~~~d~Vih~A~~   59 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGF-TNLVLRTH--------------------KELDLTRQADVEAFFAKEKPTYVILAAAK   59 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCC-cEEEeecc--------------------ccCCCCCHHHHHHHHhccCCCEEEEeeee
Confidence            6999999999999999999998 55544321                    1289999999999887  47999999987


Q ss_pred             CCC-CCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhhHHH
Q 023689           91 CTL-EDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKT  169 (278)
Q Consensus        91 ~~~-~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~  169 (278)
                      ... ..+..++...+++|+.++.+++++|++.++++||++||... |+...  ..+++|+++.... ..+....|+.+|.
T Consensus        60 ~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~v-yg~~~--~~~~~E~~~~~~~-~~p~~~~Y~~sK~  135 (306)
T PLN02725         60 VGGIHANMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCI-YPKFA--PQPIPETALLTGP-PEPTNEWYAIAKI  135 (306)
T ss_pred             ecccchhhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceee-cCCCC--CCCCCHHHhccCC-CCCCcchHHHHHH
Confidence            543 22234556789999999999999999999999999999665 44322  3567887643211 0111135999999


Q ss_pred             HHHHHHHHHHHhcCCceEEEecceeeCCCCCCC---CchhHHHHH----HHhhCCCCcc----cccccCcccHHHHHHHH
Q 023689          170 LAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY---LNASCAVLQ----QLLQGSKDTQ----EYHWLGAVPVKDVAKAQ  238 (278)
Q Consensus       170 ~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~---~~~~~~~~~----~~~~~~~~~~----~~~~~~~i~~~D~a~~~  238 (278)
                      ++|++++.+.+.++++++++||+.+||+.....   ...+..++.    ....+.+...    +.+.++++|++|+++++
T Consensus       136 ~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~  215 (306)
T PLN02725        136 AGIKMCQAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAV  215 (306)
T ss_pred             HHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHH
Confidence            999999999888899999999999999975321   122333333    2334555433    34678999999999999


Q ss_pred             HhhhcCCCCCceEEe-cCccccHHHHHHHHHHhCC
Q 023689          239 VLLFESPAASGRYLC-TNGIYQFGDFAERVSKLFP  272 (278)
Q Consensus       239 ~~~~~~~~~~~~~~~-~~~~~s~~e~~~~i~~~~~  272 (278)
                      +.++++....+.|++ ++..+++.|+++.+.+.++
T Consensus       216 ~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~  250 (306)
T PLN02725        216 VFLMRRYSGAEHVNVGSGDEVTIKELAELVKEVVG  250 (306)
T ss_pred             HHHHhccccCcceEeCCCCcccHHHHHHHHHHHhC
Confidence            999987544456655 4678999999999999885

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.6e-33  Score=239.99  Aligned_cols=240  Identities=24%  Similarity=0.185  Sum_probs=207.9

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCCC-CCCceEEEEccCCChhhHHHHhcC--c
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGA-GDANLRVFEADVLDSGAVSRAVEG--C   81 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~~-~~~~v~~~~~Dl~d~~~~~~~~~~--~   81 (278)
                      -+++|+||||||+|-||+++|+++++.+..+++.+.|++.+...+.. +... ...+..++.+|++|.+.+.+++++  +
T Consensus       247 ~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kv  326 (588)
T COG1086         247 MLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKV  326 (588)
T ss_pred             HcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCCC
Confidence            35789999999999999999999999998899999997765433321 1111 112789999999999999999998  9


Q ss_pred             cEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccC
Q 023689           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRK  161 (278)
Q Consensus        82 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  161 (278)
                      |+|||+|+..++..++.++.+.+++|+.||.|++++|.+.++++||++||..++++.                       
T Consensus       327 d~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKAV~Pt-----------------------  383 (588)
T COG1086         327 DIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKAVNPT-----------------------  383 (588)
T ss_pred             ceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCcccCCc-----------------------
Confidence            999999999999999999999999999999999999999999999999998887552                       


Q ss_pred             chhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccc--ccccCcccHHHHHH
Q 023689          162 KWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQE--YHWLGAVPVKDVAK  236 (278)
Q Consensus       162 ~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~D~a~  236 (278)
                      +.||.||.++|.+..++++..   +-.++++|+|+|.|-.    .+.++.+.+++.+|.|+.+.  +-.|-|+.+.|+++
T Consensus       384 NvmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSr----GSViPlFk~QI~~GgplTvTdp~mtRyfMTI~EAv~  459 (588)
T COG1086         384 NVMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSR----GSVIPLFKKQIAEGGPLTVTDPDMTRFFMTIPEAVQ  459 (588)
T ss_pred             hHhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCC----CCCHHHHHHHHHcCCCccccCCCceeEEEEHHHHHH
Confidence            689999999999999998744   3899999999999986    34678888999999999885  46788999999999


Q ss_pred             HHHhhhcCCCCCceEEec-CccccHHHHHHHHHHhCC
Q 023689          237 AQVLLFESPAASGRYLCT-NGIYQFGDFAERVSKLFP  272 (278)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~i~~~~~  272 (278)
                      .++.+......+.+|+.. |+++++.|+++.+.+..+
T Consensus       460 LVlqA~a~~~gGeifvldMGepvkI~dLAk~mi~l~g  496 (588)
T COG1086         460 LVLQAGAIAKGGEIFVLDMGEPVKIIDLAKAMIELAG  496 (588)
T ss_pred             HHHHHHhhcCCCcEEEEcCCCCeEHHHHHHHHHHHhC
Confidence            999999876665689886 799999999999999884

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=5.6e-33  Score=221.85  Aligned_cols=222  Identities=22%  Similarity=0.232  Sum_probs=192.8

Q ss_pred             eEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc--CccEEEEec
Q 023689           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFHVA   88 (278)
Q Consensus        11 ~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vi~~a   88 (278)
                      +|||||++|.+|++|++.|. .++ +|++++|..                     .|++|++.+.++++  ++|+|||+|
T Consensus         2 ~iLi~G~~GqLG~~L~~~l~-~~~-~v~a~~~~~---------------------~Ditd~~~v~~~i~~~~PDvVIn~A   58 (281)
T COG1091           2 KILITGANGQLGTELRRALP-GEF-EVIATDRAE---------------------LDITDPDAVLEVIRETRPDVVINAA   58 (281)
T ss_pred             cEEEEcCCChHHHHHHHHhC-CCc-eEEeccCcc---------------------ccccChHHHHHHHHhhCCCEEEECc
Confidence            49999999999999999998 556 888887754                     89999999999998  579999999


Q ss_pred             ccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhhHH
Q 023689           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK  168 (278)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK  168 (278)
                      +...++.++.+++.++.+|..|+.++.++|++.|. ++||+||..++.+..+   .++.|++++.|.      +.||.||
T Consensus        59 Ayt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga-~lVhiSTDyVFDG~~~---~~Y~E~D~~~P~------nvYG~sK  128 (281)
T COG1091          59 AYTAVDKAESEPELAFAVNATGAENLARAAAEVGA-RLVHISTDYVFDGEKG---GPYKETDTPNPL------NVYGRSK  128 (281)
T ss_pred             cccccccccCCHHHHHHhHHHHHHHHHHHHHHhCC-eEEEeecceEecCCCC---CCCCCCCCCCCh------hhhhHHH
Confidence            99999989999999999999999999999999995 7999999888777543   679999988886      7999999


Q ss_pred             HHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcc-cccccCcccHHHHHHHHHhhhcCCCC
Q 023689          169 TLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ-EYHWLGAVPVKDVAKAQVLLFESPAA  247 (278)
Q Consensus       169 ~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~D~a~~~~~~~~~~~~  247 (278)
                      +++|..++    +.+-+..++|.+.+||....   .+...+++....++++.+ .++..+++++.|+|+++..++.....
T Consensus       129 l~GE~~v~----~~~~~~~I~Rtswv~g~~g~---nFv~tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~i~~ll~~~~~  201 (281)
T COG1091         129 LAGEEAVR----AAGPRHLILRTSWVYGEYGN---NFVKTMLRLAKEGKELKVVDDQYGSPTYTEDLADAILELLEKEKE  201 (281)
T ss_pred             HHHHHHHH----HhCCCEEEEEeeeeecCCCC---CHHHHHHHHhhcCCceEEECCeeeCCccHHHHHHHHHHHHhcccc
Confidence            99999997    55789999999999999763   356667777777777665 56899999999999999999998877


Q ss_pred             CceEEec-CccccHHHHHHHHHHhCC
Q 023689          248 SGRYLCT-NGIYQFGDFAERVSKLFP  272 (278)
Q Consensus       248 ~~~~~~~-~~~~s~~e~~~~i~~~~~  272 (278)
                      .|+|+++ .+..||.|+++.|.+.++
T Consensus       202 ~~~yH~~~~g~~Swydfa~~I~~~~~  227 (281)
T COG1091         202 GGVYHLVNSGECSWYEFAKAIFEEAG  227 (281)
T ss_pred             CcEEEEeCCCcccHHHHHHHHHHHhC
Confidence            7788665 456799999999999874

>PLN02996 fatty acyl-CoA reductase

Probab=100.00  E-value=3.2e-33  Score=245.84  Aligned_cols=265  Identities=18%  Similarity=0.198  Sum_probs=187.2

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCC--CeEEEEecCCCCCcccccC----C-------------CC----CCCceEE
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNY--TSINATVFPGSDSSHLFAL----P-------------GA----GDANLRV   63 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~--~~v~~~~r~~~~~~~~~~~----~-------------~~----~~~~v~~   63 (278)
                      .++|+|||||||||||++|+++|++.+.  ..|+++.|..........+    .             ..    ...++++
T Consensus         9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~   88 (491)
T PLN02996          9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP   88 (491)
T ss_pred             hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence            4679999999999999999999998643  4689999866533221110    0             00    0137999


Q ss_pred             EEccCC-------ChhhHHHHhcCccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhc-CCCEEEEecceeee
Q 023689           64 FEADVL-------DSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-GVRRVVVTSSISAI  135 (278)
Q Consensus        64 ~~~Dl~-------d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~v~~Ss~~~~  135 (278)
                      +.+|++       +.+.++++++++|+|||+|+....   ..++...+++|+.|+.+++++|++. ++++||++||.+++
T Consensus        89 i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vy  165 (491)
T PLN02996         89 VPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNF---DERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVC  165 (491)
T ss_pred             EecccCCcCCCCChHHHHHHHHhCCCEEEECccccCC---cCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEe
Confidence            999998       445577888899999999997654   2456789999999999999999886 68899999986665


Q ss_pred             ecCCCC-CCccccCCC-CC-----c-----------------------------------hhhhhccCchhhhHHHHHHH
Q 023689          136 VPNPGW-KGKVFDETS-WT-----D-----------------------------------LEYCKSRKKWYPVSKTLAEK  173 (278)
Q Consensus       136 ~~~~~~-~~~~~~E~~-~~-----~-----------------------------------~~~~~~~~~~y~~sK~~~e~  173 (278)
                      +...+. ...++++.. +.     +                                   +.......+.|+.||.++|.
T Consensus       166 G~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~  245 (491)
T PLN02996        166 GEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEM  245 (491)
T ss_pred             cCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHHH
Confidence            432211 111121110 00     0                                   00011123679999999999


Q ss_pred             HHHHHHHhcCCceEEEecceeeCCCCCCCCch------hHHHHHHHhhCCCCcc---cccccCcccHHHHHHHHHhhhcC
Q 023689          174 AAWEFAEKHGVDVVAIHPATCLGPLMQPYLNA------SCAVLQQLLQGSKDTQ---EYHWLGAVPVKDVAKAQVLLFES  244 (278)
Q Consensus       174 ~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~------~~~~~~~~~~~~~~~~---~~~~~~~i~~~D~a~~~~~~~~~  244 (278)
                      ++..++  .+++++++||++|+|+...+....      ...++.....|.....   +++.+|++|+||++++++.++.+
T Consensus       246 lv~~~~--~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~~~  323 (491)
T PLN02996        246 LLGNFK--ENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVAMAA  323 (491)
T ss_pred             HHHHhc--CCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHHHHH
Confidence            998764  389999999999999986553222      2334444555655433   45799999999999999999875


Q ss_pred             C--C--CCceEEec-C--ccccHHHHHHHHHHhCCCCCC
Q 023689          245 P--A--ASGRYLCT-N--GIYQFGDFAERVSKLFPEFPV  276 (278)
Q Consensus       245 ~--~--~~~~~~~~-~--~~~s~~e~~~~i~~~~~~~~~  276 (278)
                      .  .  ...+|+++ +  .++|+.|+++.+.+.+.+.|+
T Consensus       324 ~~~~~~~~~vYNi~s~~~~~~s~~ei~~~~~~~~~~~p~  362 (491)
T PLN02996        324 HAGGQGSEIIYHVGSSLKNPVKFSNLHDFAYRYFSKNPW  362 (491)
T ss_pred             hhccCCCCcEEEecCCCCCcccHHHHHHHHHHHhhhCCC
Confidence            3  1  22368765 4  589999999999998866654

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=100.00  E-value=1.8e-34  Score=231.77  Aligned_cols=234  Identities=24%  Similarity=0.172  Sum_probs=180.4

Q ss_pred             EEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCC-CCCCceE----EEEccCCChhhHHHHhc--CccE
Q 023689           12 VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPG-AGDANLR----VFEADVLDSGAVSRAVE--GCKG   83 (278)
Q Consensus        12 vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~-~~~~~v~----~~~~Dl~d~~~~~~~~~--~~d~   83 (278)
                      ||||||+|.||+.|+++|++.+...+++++++....-.+.. +.. ....++.    .+.+|++|.+.+.++++  ++|+
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi   80 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI   80 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence            79999999999999999999987789999997655433322 210 0111343    45899999999999999  8999


Q ss_pred             EEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCch
Q 023689           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW  163 (278)
Q Consensus        84 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  163 (278)
                      |||.|+..++..++..+.+++++|+.||.+++++|.++++++||++||..++.+                       .+.
T Consensus        81 VfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKAv~P-----------------------tnv  137 (293)
T PF02719_consen   81 VFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKAVNP-----------------------TNV  137 (293)
T ss_dssp             EEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGCSS-------------------------SH
T ss_pred             EEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccccCCC-----------------------CcH
Confidence            999999988877788999999999999999999999999999999999766533                       168


Q ss_pred             hhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcc--cccccCcccHHHHHHHH
Q 023689          164 YPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ--EYHWLGAVPVKDVAKAQ  238 (278)
Q Consensus       164 y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~D~a~~~  238 (278)
                      ||.||.++|+++..++...   +..++++|+|+|.|-.    .+.++.+..++.+|.|+.+  ++..|-|+.++|+++.+
T Consensus       138 mGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~----GSVip~F~~Qi~~g~PlTvT~p~mtRffmti~EAv~Lv  213 (293)
T PF02719_consen  138 MGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSR----GSVIPLFKKQIKNGGPLTVTDPDMTRFFMTIEEAVQLV  213 (293)
T ss_dssp             HHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGT----TSCHHHHHHHHHTTSSEEECETT-EEEEE-HHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCC----CcHHHHHHHHHHcCCcceeCCCCcEEEEecHHHHHHHH
Confidence            9999999999999888765   6899999999999975    3577888999999999887  45779999999999999


Q ss_pred             HhhhcCCCCCceEEec-CccccHHHHHHHHHHhCC
Q 023689          239 VLLFESPAASGRYLCT-NGIYQFGDFAERVSKLFP  272 (278)
Q Consensus       239 ~~~~~~~~~~~~~~~~-~~~~s~~e~~~~i~~~~~  272 (278)
                      +.+......+.+|+.. ++++++.|+++.+.+.++
T Consensus       214 l~a~~~~~~geifvl~mg~~v~I~dlA~~~i~~~g  248 (293)
T PF02719_consen  214 LQAAALAKGGEIFVLDMGEPVKILDLAEAMIELSG  248 (293)
T ss_dssp             HHHHHH--TTEEEEE---TCEECCCHHHHHHHHTT
T ss_pred             HHHHhhCCCCcEEEecCCCCcCHHHHHHHHHhhcc
Confidence            9998876665688876 689999999999999885

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=100.00  E-value=4.1e-33  Score=217.21  Aligned_cols=252  Identities=22%  Similarity=0.279  Sum_probs=198.5

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHC--CCCeEEEEecCCC--CCcccccCCCCCCCceEEEEccCCChhhHHHHhc--Cc
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDN--NYTSINATVFPGS--DSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GC   81 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~--g~~~v~~~~r~~~--~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~   81 (278)
                      +-+++|||||.||||++.+..+...  .+ ..+.++.-.-  ....+++..  ...+.+++++|+.+...+.-.+.  .+
T Consensus         5 ~~~~vlItgg~gfi~Sn~~~~~~~~~p~~-~~v~idkL~~~s~~~~l~~~~--n~p~ykfv~~di~~~~~~~~~~~~~~i   81 (331)
T KOG0747|consen    5 KEKNVLITGGAGFIGSNFINYLVDKYPDY-KFVNLDKLDYCSNLKNLEPVR--NSPNYKFVEGDIADADLVLYLFETEEI   81 (331)
T ss_pred             ccceEEEecCcCcchhhhhhhcccCCCCC-cEEEEeecccccccchhhhhc--cCCCceEeeccccchHHHHhhhccCch
Confidence            3479999999999999999999876  34 4444443111  122222222  23388999999999988888775  68


Q ss_pred             cEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhc-CCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhcc
Q 023689           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSR  160 (278)
Q Consensus        82 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  160 (278)
                      |.|+|+|+..+...+..+..+....|+.++..|+++++.. ++++|||+|| ..+|+..+. .....|.+.+.|.     
T Consensus        82 d~vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvST-deVYGds~~-~~~~~E~s~~nPt-----  154 (331)
T KOG0747|consen   82 DTVIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVST-DEVYGDSDE-DAVVGEASLLNPT-----  154 (331)
T ss_pred             hhhhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecc-cceecCccc-cccccccccCCCC-----
Confidence            9999999998888888888999999999999999999998 5999999998 455555543 2333377777775     


Q ss_pred             CchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcc-c--ccccCcccHHHHHHH
Q 023689          161 KKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ-E--YHWLGAVPVKDVAKA  237 (278)
Q Consensus       161 ~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~i~~~D~a~~  237 (278)
                       ++|+.+|+++|..++++.+++|++++++|.++||||.+..- ..++.++.....+.+... +  .+.++|+|++|++++
T Consensus       155 -npyAasKaAaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~-klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea  232 (331)
T KOG0747|consen  155 -NPYAASKAAAEMLVRSYGRSYGLPVVTTRMNNVYGPNQYPE-KLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEA  232 (331)
T ss_pred             -CchHHHHHHHHHHHHHHhhccCCcEEEEeccCccCCCcChH-HHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHH
Confidence             89999999999999999999999999999999999997664 456677775555555444 3  388999999999999


Q ss_pred             HHhhhcCCCCCceEEe-cCccccHHHHHHHHHHhC
Q 023689          238 QVLLFESPAASGRYLC-TNGIYQFGDFAERVSKLF  271 (278)
Q Consensus       238 ~~~~~~~~~~~~~~~~-~~~~~s~~e~~~~i~~~~  271 (278)
                      +..+++..+.+.+|++ ++.+.+..|+++.+++.+
T Consensus       233 ~~~v~~Kg~~geIYNIgtd~e~~~~~l~k~i~eli  267 (331)
T KOG0747|consen  233 FKAVLEKGELGEIYNIGTDDEMRVIDLAKDICELF  267 (331)
T ss_pred             HHHHHhcCCccceeeccCcchhhHHHHHHHHHHHH
Confidence            9999998665668865 577888888888777754

>CHL00194 ycf39 Ycf39; Provisional

Probab=100.00  E-value=1.9e-32  Score=230.21  Aligned_cols=219  Identities=17%  Similarity=0.157  Sum_probs=169.3

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEecc
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a~   89 (278)
                      |+|||||||||||++|+++|+++|+ +|++++|+.+....+..      .+++++.+|++|++++.++++++|+|||+++
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g~-~V~~l~R~~~~~~~l~~------~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~   73 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEGY-QVRCLVRNLRKASFLKE------WGAELVYGDLSLPETLPPSFKGVTAIIDAST   73 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcChHHhhhHhh------cCCEEEECCCCCHHHHHHHHCCCCEEEECCC
Confidence            4899999999999999999999999 89999997654332221      1789999999999999999999999999976


Q ss_pred             cCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhhHHH
Q 023689           90 PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKT  169 (278)
Q Consensus        90 ~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~  169 (278)
                      ...     .+....+++|+.++.+++++|++.++++||++||..+. ..+                     ...|..+|.
T Consensus        74 ~~~-----~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~-~~~---------------------~~~~~~~K~  126 (317)
T CHL00194         74 SRP-----SDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAE-QYP---------------------YIPLMKLKS  126 (317)
T ss_pred             CCC-----CCccchhhhhHHHHHHHHHHHHHcCCCEEEEecccccc-ccC---------------------CChHHHHHH
Confidence            421     23456788999999999999999999999999984321 100                     135788999


Q ss_pred             HHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcc--cccccCcccHHHHHHHHHhhhcCCCC
Q 023689          170 LAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ--EYHWLGAVPVKDVAKAQVLLFESPAA  247 (278)
Q Consensus       170 ~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~D~a~~~~~~~~~~~~  247 (278)
                      .+|++++    +++++++++||+.+|+.....       .......+.+...  +.+.+++||++|+|++++.+++++..
T Consensus       127 ~~e~~l~----~~~l~~tilRp~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~  195 (317)
T CHL00194        127 DIEQKLK----KSGIPYTIFRLAGFFQGLISQ-------YAIPILEKQPIWITNESTPISYIDTQDAAKFCLKSLSLPET  195 (317)
T ss_pred             HHHHHHH----HcCCCeEEEeecHHhhhhhhh-------hhhhhccCCceEecCCCCccCccCHHHHHHHHHHHhcCccc
Confidence            9998875    679999999999888642111       1111222333333  34678999999999999999987654


Q ss_pred             C-ceEEe-cCccccHHHHHHHHHHhCCC
Q 023689          248 S-GRYLC-TNGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       248 ~-~~~~~-~~~~~s~~e~~~~i~~~~~~  273 (278)
                      . ++|++ +++.+|++|+++.+.+.+++
T Consensus       196 ~~~~~ni~g~~~~s~~el~~~~~~~~g~  223 (317)
T CHL00194        196 KNKTFPLVGPKSWNSSEIISLCEQLSGQ  223 (317)
T ss_pred             cCcEEEecCCCccCHHHHHHHHHHHhCC
Confidence            4 46755 56789999999999999864

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=100.00  E-value=1.9e-33  Score=232.02  Aligned_cols=224  Identities=24%  Similarity=0.267  Sum_probs=171.4

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc--CccEEEEe
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFHV   87 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vi~~   87 (278)
                      ||||||||+|+||++|.+.|.+.|+ +|+++.|.                     ..|++|.+.+.+.++  ++|+|||+
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~-~v~~~~r~---------------------~~dl~d~~~~~~~~~~~~pd~Vin~   58 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGY-EVIATSRS---------------------DLDLTDPEAVAKLLEAFKPDVVINC   58 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSE-EEEEESTT---------------------CS-TTSHHHHHHHHHHH--SEEEE-
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCC-EEEEeCch---------------------hcCCCCHHHHHHHHHHhCCCeEecc
Confidence            6999999999999999999999998 88888665                     289999999999987  48999999


Q ss_pred             cccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhhH
Q 023689           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVS  167 (278)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~s  167 (278)
                      |+...++.++.+++..+.+|+.++.+|.++|++.+. ++||+||..++.+..   ..+++|++++.|.      +.||.+
T Consensus        59 aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~~-~li~~STd~VFdG~~---~~~y~E~d~~~P~------~~YG~~  128 (286)
T PF04321_consen   59 AAYTNVDACEKNPEEAYAINVDATKNLAEACKERGA-RLIHISTDYVFDGDK---GGPYTEDDPPNPL------NVYGRS  128 (286)
T ss_dssp             -----HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT--EEEEEEEGGGS-SST---SSSB-TTS----S------SHHHHH
T ss_pred             ceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcCC-cEEEeeccEEEcCCc---ccccccCCCCCCC------CHHHHH
Confidence            998777667778899999999999999999999985 899999977766553   3668999887774      799999


Q ss_pred             HHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcc-cccccCcccHHHHHHHHHhhhcCCC
Q 023689          168 KTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ-EYHWLGAVPVKDVAKAQVLLFESPA  246 (278)
Q Consensus       168 K~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~D~a~~~~~~~~~~~  246 (278)
                      |..+|+.++.    ..-+..++|++.+||+...   .+..+++..+..++++.. .+..+++++++|+|+++..++++..
T Consensus       129 K~~~E~~v~~----~~~~~~IlR~~~~~g~~~~---~~~~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~~i~~l~~~~~  201 (286)
T PF04321_consen  129 KLEGEQAVRA----ACPNALILRTSWVYGPSGR---NFLRWLLRRLRQGEPIKLFDDQYRSPTYVDDLARVILELIEKNL  201 (286)
T ss_dssp             HHHHHHHHHH----H-SSEEEEEE-SEESSSSS---SHHHHHHHHHHCTSEEEEESSCEE--EEHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHH----hcCCEEEEecceecccCCC---chhhhHHHHHhcCCeeEeeCCceeCCEEHHHHHHHHHHHHHhcc
Confidence            9999999974    3348999999999999332   467777788877777766 4578899999999999999998754


Q ss_pred             C----CceEE-ecCccccHHHHHHHHHHhCC
Q 023689          247 A----SGRYL-CTNGIYQFGDFAERVSKLFP  272 (278)
Q Consensus       247 ~----~~~~~-~~~~~~s~~e~~~~i~~~~~  272 (278)
                      .    .|+|+ ++++.+|+.|+++.+.+.++
T Consensus       202 ~~~~~~Giyh~~~~~~~S~~e~~~~i~~~~~  232 (286)
T PF04321_consen  202 SGASPWGIYHLSGPERVSRYEFAEAIAKILG  232 (286)
T ss_dssp             H-GGG-EEEE---BS-EEHHHHHHHHHHHHT
T ss_pred             cccccceeEEEecCcccCHHHHHHHHHHHhC
Confidence            3    57885 56778999999999999874

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=100.00  E-value=5.8e-32  Score=227.35  Aligned_cols=241  Identities=21%  Similarity=0.202  Sum_probs=179.6

Q ss_pred             EEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc----CccEEEEe
Q 023689           12 VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----GCKGVFHV   87 (278)
Q Consensus        12 vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~----~~d~vi~~   87 (278)
                      |||||||||||++++++|.++|+.+|++++|..... .+..+      ....+..|+.+.+.++.+.+    ++|+|||+
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~~~~------~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~   73 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KFLNL------ADLVIADYIDKEDFLDRLEKGAFGKIEAIFHQ   73 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hhhhh------hheeeeccCcchhHHHHHHhhccCCCCEEEEC
Confidence            699999999999999999999974677776644321 11111      22356788988887777664    79999999


Q ss_pred             cccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhhH
Q 023689           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVS  167 (278)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~s  167 (278)
                      |+....  ...++...+++|+.++.+++++|++.++ +||++||.. +|+...   .++.|+++..     .+.+.|+.+
T Consensus        74 A~~~~~--~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~v~~SS~~-vy~~~~---~~~~e~~~~~-----~p~~~Y~~s  141 (314)
T TIGR02197        74 GACSDT--TETDGEYMMENNYQYSKRLLDWCAEKGI-PFIYASSAA-TYGDGE---AGFREGRELE-----RPLNVYGYS  141 (314)
T ss_pred             ccccCc--cccchHHHHHHHHHHHHHHHHHHHHhCC-cEEEEccHH-hcCCCC---CCcccccCcC-----CCCCHHHHH
Confidence            986443  2345678899999999999999999886 799999865 444332   3455555322     123689999


Q ss_pred             HHHHHHHHHHHHH--hcCCceEEEecceeeCCCCCCC---CchhHHHHHHHhhCCCCcc---------cccccCcccHHH
Q 023689          168 KTLAEKAAWEFAE--KHGVDVVAIHPATCLGPLMQPY---LNASCAVLQQLLQGSKDTQ---------EYHWLGAVPVKD  233 (278)
Q Consensus       168 K~~~e~~~~~~~~--~~~~~~~~lrp~~i~g~~~~~~---~~~~~~~~~~~~~~~~~~~---------~~~~~~~i~~~D  233 (278)
                      |..+|.+++++..  ..+++++++||+.+||+.....   ...+..++..+..+.++..         +++.++++|++|
T Consensus       142 K~~~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D  221 (314)
T TIGR02197       142 KFLFDQYVRRRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKD  221 (314)
T ss_pred             HHHHHHHHHHHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHH
Confidence            9999999987543  2367999999999999985432   2344566666666654432         346789999999


Q ss_pred             HHHHHHhhhcCCCCCceEEe-cCccccHHHHHHHHHHhCC
Q 023689          234 VAKAQVLLFESPAASGRYLC-TNGIYQFGDFAERVSKLFP  272 (278)
Q Consensus       234 ~a~~~~~~~~~~~~~~~~~~-~~~~~s~~e~~~~i~~~~~  272 (278)
                      +++++..++.+ ...++|++ +++++|++|+++.+.+.++
T Consensus       222 ~a~~i~~~~~~-~~~~~yni~~~~~~s~~e~~~~i~~~~g  260 (314)
T TIGR02197       222 VVDVNLWLLEN-GVSGIFNLGTGRARSFNDLADAVFKALG  260 (314)
T ss_pred             HHHHHHHHHhc-ccCceEEcCCCCCccHHHHHHHHHHHhC
Confidence            99999999987 45568865 4679999999999999885

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=100.00  E-value=1.3e-32  Score=219.22  Aligned_cols=253  Identities=22%  Similarity=0.239  Sum_probs=196.9

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEec-CCCCCccccc---CCCCCCCceEEEEccCCChhhHHHHhc--Ccc
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVF-PGSDSSHLFA---LPGAGDANLRVFEADVLDSGAVSRAVE--GCK   82 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r-~~~~~~~~~~---~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d   82 (278)
                      .++||||||.||||+|.+-+|+++|+ .|++++. +......+..   +....+ ++.++++|++|.+.++++++  ++|
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy-~v~~vDNl~n~~~~sl~r~~~l~~~~~-~v~f~~~Dl~D~~~L~kvF~~~~fd   79 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGY-GVVIVDNLNNSYLESLKRVRQLLGEGK-SVFFVEGDLNDAEALEKLFSEVKFD   79 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCC-cEEEEecccccchhHHHHHHHhcCCCC-ceEEEEeccCCHHHHHHHHhhcCCc
Confidence            47899999999999999999999999 7777765 3333333332   222223 89999999999999999998  579


Q ss_pred             EEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCc-hhhhhccC
Q 023689           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD-LEYCKSRK  161 (278)
Q Consensus        83 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~-~~~~~~~~  161 (278)
                      .|+|+|+..........+..+++.|+.|+.+|++.|++++++.+|+.|| +.+|+.+..  .|++|+.+.. |.      
T Consensus        80 ~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sss-atvYG~p~~--ip~te~~~t~~p~------  150 (343)
T KOG1371|consen   80 AVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSS-ATVYGLPTK--VPITEEDPTDQPT------  150 (343)
T ss_pred             eEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecc-eeeecCcce--eeccCcCCCCCCC------
Confidence            9999999877755666778999999999999999999999999999887 666776664  8999999877 43      


Q ss_pred             chhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCC--CCCC---C---chhHHHHHHHhhC---------CCCcc--c
Q 023689          162 KWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPL--MQPY---L---NASCAVLQQLLQG---------SKDTQ--E  222 (278)
Q Consensus       162 ~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~--~~~~---~---~~~~~~~~~~~~~---------~~~~~--~  222 (278)
                      ++|+.+|.+.|++...+...+++.++.||.++++|..  .+..   .   ..+...+.+...+         .+...  +
T Consensus       151 ~pyg~tK~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~g~d~~t~dg  230 (343)
T KOG1371|consen  151 NPYGKTKKAIEEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVVGRDYTTIDG  230 (343)
T ss_pred             CcchhhhHHHHHHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceeecCcccccCC
Confidence            7999999999999999999999999999999999932  2111   0   1111122222111         11111  3


Q ss_pred             ccccCcccHHHHHHHHHhhhcCCCCC---ceEEec-CccccHHHHHHHHHHhCC
Q 023689          223 YHWLGAVPVKDVAKAQVLLFESPAAS---GRYLCT-NGIYQFGDFAERVSKLFP  272 (278)
Q Consensus       223 ~~~~~~i~~~D~a~~~~~~~~~~~~~---~~~~~~-~~~~s~~e~~~~i~~~~~  272 (278)
                      +..+++||+-|.|+..+.++......   ++|+.+ +...++.+++.++++..+
T Consensus       231 t~vrdyi~v~Dla~~h~~al~k~~~~~~~~i~Nlgtg~g~~V~~lv~a~~k~~g  284 (343)
T KOG1371|consen  231 TIVRDYIHVLDLADGHVAALGKLRGAAEFGVYNLGTGKGSSVLELVTAFEKALG  284 (343)
T ss_pred             CeeecceeeEehHHHHHHHhhccccchheeeEeecCCCCccHHHHHHHHHHHhc
Confidence            47899999999999999999886542   467654 668899999999999984

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=100.00  E-value=3.8e-31  Score=223.55  Aligned_cols=251  Identities=20%  Similarity=0.188  Sum_probs=185.0

Q ss_pred             eEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCC-CcccccCCCCCCCceEEEEccCCChhhHHHHhc--CccEEEEe
Q 023689           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFHV   87 (278)
Q Consensus        11 ~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~-~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vi~~   87 (278)
                      +||||||||+||++++++|+++|+ +|++.+|.... ......... .. +++++.+|+++++++.++++  ++|+|||+
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~-~V~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~   77 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGH-EVVVLDNLSNGSPEALKRGER-IT-RVTFVEGDLRDRELLDRLFEEHKIDAVIHF   77 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCC-eEEEEeCCCccchhhhhhhcc-cc-ceEEEECCCCCHHHHHHHHHhCCCcEEEEC
Confidence            589999999999999999999999 78777653322 111111111 11 57788999999999999986  68999999


Q ss_pred             cccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhhH
Q 023689           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVS  167 (278)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~s  167 (278)
                      |+..............++.|+.++.+++++|++.+++++|++||... |+...  ..+++|+++..+.      +.|+.+
T Consensus        78 ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~-~g~~~--~~~~~e~~~~~~~------~~y~~s  148 (328)
T TIGR01179        78 AGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAV-YGEPS--SIPISEDSPLGPI------NPYGRS  148 (328)
T ss_pred             ccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhh-cCCCC--CCCccccCCCCCC------CchHHH
Confidence            99754433334556788999999999999999998889999998654 43332  2467887765542      689999


Q ss_pred             HHHHHHHHHHHHHh-cCCceEEEecceeeCCCCCCC--------CchhHHHHHHHh-hCCCC---------cccccccCc
Q 023689          168 KTLAEKAAWEFAEK-HGVDVVAIHPATCLGPLMQPY--------LNASCAVLQQLL-QGSKD---------TQEYHWLGA  228 (278)
Q Consensus       168 K~~~e~~~~~~~~~-~~~~~~~lrp~~i~g~~~~~~--------~~~~~~~~~~~~-~~~~~---------~~~~~~~~~  228 (278)
                      |..+|.+++.++++ .+++++++||+.+||+.....        ......+..... ...+.         ..+.+.+++
T Consensus       149 K~~~e~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  228 (328)
T TIGR01179       149 KLMSERILRDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDY  228 (328)
T ss_pred             HHHHHHHHHHHHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEee
Confidence            99999999999877 799999999999999864321        112222222222 11111         123467899


Q ss_pred             ccHHHHHHHHHhhhcCC---CCCceEEe-cCccccHHHHHHHHHHhCCC
Q 023689          229 VPVKDVAKAQVLLFESP---AASGRYLC-TNGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       229 i~~~D~a~~~~~~~~~~---~~~~~~~~-~~~~~s~~e~~~~i~~~~~~  273 (278)
                      ||++|+|++++.++.+.   ...+.|++ +++.+|++|+++.+.+.++.
T Consensus       229 v~~~D~a~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~ei~~~~~~~~g~  277 (328)
T TIGR01179       229 IHVMDLADAHLAALEYLLNGGESHVYNLGYGQGFSVLEVIEAFKKVSGV  277 (328)
T ss_pred             eeHHHHHHHHHHHHhhhhcCCCcceEEcCCCCcccHHHHHHHHHHHhCC
Confidence            99999999999998753   22357866 56789999999999999853

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=100.00  E-value=3.6e-31  Score=218.69  Aligned_cols=255  Identities=27%  Similarity=0.302  Sum_probs=188.2

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCC-CCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNN-YTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g-~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      ++.++|||||+||+|+||+++|++++ ..+++..+..+..........+..+..++.+++|+.|..++..++.++ .|+|
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~-~Vvh   81 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGA-VVVH   81 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccCc-eEEE
Confidence            35799999999999999999999998 238888877664322222211101228999999999999999999999 8999


Q ss_pred             ecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhh
Q 023689           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPV  166 (278)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~  166 (278)
                      +|+.........+.+..+++|+.||.+++++|++.+++++||+||..++.+...  ....+|+.+. |   ....+.|+.
T Consensus        82 ~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~--~~n~~E~~p~-p---~~~~d~Y~~  155 (361)
T KOG1430|consen   82 CAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEP--IINGDESLPY-P---LKHIDPYGE  155 (361)
T ss_pred             eccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCee--cccCCCCCCC-c---cccccccch
Confidence            998777666666789999999999999999999999999999999888776433  1333444332 2   111258999


Q ss_pred             HHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcc---cccccCcccHHHHHHHHHhhhc
Q 023689          167 SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ---EYHWLGAVPVKDVAKAQVLLFE  243 (278)
Q Consensus       167 sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~D~a~~~~~~~~  243 (278)
                      ||..+|+++.+.+...++..++|||+.||||++.....   .+..-+..|.-...   ++.+.++++++.++.+.+.+..
T Consensus       156 sKa~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~~~~~---~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~~  232 (361)
T KOG1430|consen  156 SKALAEKLVLEANGSDDLYTCALRPPGIYGPGDKRLLP---KIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHILAAR  232 (361)
T ss_pred             HHHHHHHHHHHhcCCCCeeEEEEccccccCCCCccccH---HHHHHHHccCceEEeeccccccceEEechhHHHHHHHHH
Confidence            99999999998876667999999999999999876533   33333444443222   3478889999988877755532


Q ss_pred             -----CCCCCc-eE-EecCccccHHHHHHHHHHhCC
Q 023689          244 -----SPAASG-RY-LCTNGIYQFGDFAERVSKLFP  272 (278)
Q Consensus       244 -----~~~~~~-~~-~~~~~~~s~~e~~~~i~~~~~  272 (278)
                           .+...| .| +..+.+....+++..+.+.++
T Consensus       233 aL~~~~~~~~Gq~yfI~d~~p~~~~~~~~~l~~~lg  268 (361)
T KOG1430|consen  233 ALLDKSPSVNGQFYFITDDTPVRFFDFLSPLVKALG  268 (361)
T ss_pred             HHHhcCCccCceEEEEeCCCcchhhHHHHHHHHhcC
Confidence                 233456 45 566677766666667777763

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.97  E-value=1.6e-29  Score=210.35  Aligned_cols=238  Identities=18%  Similarity=0.203  Sum_probs=164.8

Q ss_pred             EEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEecccC
Q 023689           12 VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVASPC   91 (278)
Q Consensus        12 vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~   91 (278)
                      |||||||||||+++++.|++.|+ +|++++|+..........      .+    .|+.+ ....+.+.++|+|||+|+..
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~------~~----~~~~~-~~~~~~~~~~D~Vvh~a~~~   68 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGH-EVTILTRSPPAGANTKWE------GY----KPWAP-LAESEALEGADAVINLAGEP   68 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCC-EEEEEeCCCCCCCcccce------ee----ecccc-cchhhhcCCCCEEEECCCCC
Confidence            69999999999999999999999 999999977654332110      11    12222 44566778999999999864


Q ss_pred             CCCC--CCCchhhhhhhHHhHHHHHHHHHHhcCCC--EEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhhH
Q 023689           92 TLED--PVDPEKELILPAVQGTLNVLEAAKRFGVR--RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVS  167 (278)
Q Consensus        92 ~~~~--~~~~~~~~~~~n~~~~~~ll~~~~~~~~~--~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~s  167 (278)
                      ....  ..+.....+++|+.++.+++++|++++++  .||+.|| ..+|+...  ..+++|+++..+.      +.|+..
T Consensus        69 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~-~~~yg~~~--~~~~~E~~~~~~~------~~~~~~  139 (292)
T TIGR01777        69 IADKRWTEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASA-VGYYGTSE--DRVFTEEDSPAGD------DFLAEL  139 (292)
T ss_pred             cccccCCHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeee-EEEeCCCC--CCCcCcccCCCCC------ChHHHH
Confidence            4311  12344678899999999999999999864  3444443 44555432  2567787743221      346666


Q ss_pred             HHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHHHHHHHHHhhhcCCCC
Q 023689          168 KTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAA  247 (278)
Q Consensus       168 K~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  247 (278)
                      +...|..+..+ ++.+++++++||+.+||+..... ......+ ....+.+...+++.+++||++|+|+++..+++++..
T Consensus       140 ~~~~e~~~~~~-~~~~~~~~ilR~~~v~G~~~~~~-~~~~~~~-~~~~~~~~g~~~~~~~~i~v~Dva~~i~~~l~~~~~  216 (292)
T TIGR01777       140 CRDWEEAAQAA-EDLGTRVVLLRTGIVLGPKGGAL-AKMLPPF-RLGLGGPLGSGRQWFSWIHIEDLVQLILFALENASI  216 (292)
T ss_pred             HHHHHHHhhhc-hhcCCceEEEeeeeEECCCcchh-HHHHHHH-hcCcccccCCCCcccccEeHHHHHHHHHHHhcCccc
Confidence            66666665543 35689999999999999964211 1111111 112223333355789999999999999999988666


Q ss_pred             CceEEe-cCccccHHHHHHHHHHhCCC
Q 023689          248 SGRYLC-TNGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       248 ~~~~~~-~~~~~s~~e~~~~i~~~~~~  273 (278)
                      .++|++ +++.+|++|+++.+.+.++.
T Consensus       217 ~g~~~~~~~~~~s~~di~~~i~~~~g~  243 (292)
T TIGR01777       217 SGPVNATAPEPVRNKEFAKALARALHR  243 (292)
T ss_pred             CCceEecCCCccCHHHHHHHHHHHhCC
Confidence            677765 56789999999999999853

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.97  E-value=1.5e-29  Score=217.00  Aligned_cols=251  Identities=23%  Similarity=0.232  Sum_probs=177.6

Q ss_pred             eEEEeCcchhhHHHHHHHHHHCCC-CeEEEEecCCCCCccccc---------CCCC--CCCceEEEEccCCCh------h
Q 023689           11 TVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFA---------LPGA--GDANLRVFEADVLDS------G   72 (278)
Q Consensus        11 ~vlItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~~~---------~~~~--~~~~v~~~~~Dl~d~------~   72 (278)
                      +|||||||||||++|+++|+++|+ ..|++++|+.+.......         +...  ...+++++.+|++++      +
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            589999999999999999999984 179999997653211100         0000  002789999999764      4


Q ss_pred             hHHHHhcCccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCC
Q 023689           73 AVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (278)
Q Consensus        73 ~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~  152 (278)
                      .+.++.+++|+|||+|+....   ..++....++|+.++.+++++|.+.++++|+++||.+++.....   ....|++..
T Consensus        81 ~~~~~~~~~d~vih~a~~~~~---~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~---~~~~~~~~~  154 (367)
T TIGR01746        81 EWERLAENVDTIVHNGALVNW---VYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDL---STVTEDDAI  154 (367)
T ss_pred             HHHHHHhhCCEEEeCCcEecc---CCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCC---CCccccccc
Confidence            567777899999999987553   34567788899999999999999998888999999776544222   123344332


Q ss_pred             chhhhhccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCC---CchhHHHHHHHhhCCCCcccc-cccCc
Q 023689          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY---LNASCAVLQQLLQGSKDTQEY-HWLGA  228 (278)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~~  228 (278)
                      .+. .....+.|+.+|..+|.++..+.+. |++++++||+.++|+.....   ......++............. ...++
T Consensus       155 ~~~-~~~~~~~Y~~sK~~~E~~~~~~~~~-g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  232 (367)
T TIGR01746       155 VTP-PPGLAGGYAQSKWVAELLVREASDR-GLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAYPDSPELTEDL  232 (367)
T ss_pred             ccc-ccccCCChHHHHHHHHHHHHHHHhc-CCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCCCCCCCccccCc
Confidence            221 1122357999999999999877644 99999999999999843322   122333333332222111122 36789


Q ss_pred             ccHHHHHHHHHhhhcCCCC---CceEEe-cCccccHHHHHHHHHH
Q 023689          229 VPVKDVAKAQVLLFESPAA---SGRYLC-TNGIYQFGDFAERVSK  269 (278)
Q Consensus       229 i~~~D~a~~~~~~~~~~~~---~~~~~~-~~~~~s~~e~~~~i~~  269 (278)
                      +|++|+|++++.++.++..   +++|++ +++.+++.|+++.+.+
T Consensus       233 ~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~~~s~~e~~~~i~~  277 (367)
T TIGR01746       233 TPVDYVARAIVALSSQPAASAGGPVFHVVNPEPVSLDEFLEWLER  277 (367)
T ss_pred             ccHHHHHHHHHHHHhCCCcccCCceEEecCCCCCCHHHHHHHHHH
Confidence            9999999999999877654   346755 5688999999999998

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.2e-29  Score=233.18  Aligned_cols=247  Identities=25%  Similarity=0.236  Sum_probs=176.4

Q ss_pred             ceEEEeCcchhhHHHHHHHHH--HCCCCeEEEEecCCCCCcccccCC-CCCCCceEEEEccCCCh------hhHHHHhcC
Q 023689           10 ETVCVTGANGFIGTWLVKTLL--DNNYTSINATVFPGSDSSHLFALP-GAGDANLRVFEADVLDS------GAVSRAVEG   80 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~--~~g~~~v~~~~r~~~~~~~~~~~~-~~~~~~v~~~~~Dl~d~------~~~~~~~~~   80 (278)
                      |+|||||||||||++|+++|+  +.|+ .|++++|+.... .+..+. .....+++++.+|++|+      +.+.++ ++
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g~-~V~~l~R~~~~~-~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~~   77 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRREA-TVHVLVRRQSLS-RLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-GD   77 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCCC-EEEEEECcchHH-HHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-cC
Confidence            489999999999999999999  4788 899999864321 111110 00112789999999984      345555 89


Q ss_pred             ccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhcc
Q 023689           81 CKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSR  160 (278)
Q Consensus        81 ~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  160 (278)
                      +|+|||+|+.....   .......++|+.++.+++++|++.++++||++||.+++....    ...+|+++..+   ...
T Consensus        78 ~D~Vih~Aa~~~~~---~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~----~~~~e~~~~~~---~~~  147 (657)
T PRK07201         78 IDHVVHLAAIYDLT---ADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYE----GVFREDDFDEG---QGL  147 (657)
T ss_pred             CCEEEECceeecCC---CCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCcc----Cccccccchhh---cCC
Confidence            99999999975532   345678899999999999999999999999999876643322    23455543221   122


Q ss_pred             CchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCc------hhHHHHHHHhhCCCCcc-----cccccCcc
Q 023689          161 KKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLN------ASCAVLQQLLQGSKDTQ-----EYHWLGAV  229 (278)
Q Consensus       161 ~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~------~~~~~~~~~~~~~~~~~-----~~~~~~~i  229 (278)
                      .+.|+.+|..+|+++.+   ..+++++++||+.|||+.......      .....+..+ ...+...     +....+++
T Consensus       148 ~~~Y~~sK~~~E~~~~~---~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v  223 (657)
T PRK07201        148 PTPYHRTKFEAEKLVRE---ECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKL-AKLPSWLPMVGPDGGRTNIV  223 (657)
T ss_pred             CCchHHHHHHHHHHHHH---cCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHh-ccCCcccccccCCCCeeeee
Confidence            35799999999999863   358999999999999986543211      122233333 1112111     23568999


Q ss_pred             cHHHHHHHHHhhhcCCCCCc-eEEe-cCccccHHHHHHHHHHhCCC
Q 023689          230 PVKDVAKAQVLLFESPAASG-RYLC-TNGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       230 ~~~D~a~~~~~~~~~~~~~~-~~~~-~~~~~s~~e~~~~i~~~~~~  273 (278)
                      |++|+++++..++..+...| +|++ ++++++++|+++.+.+.++.
T Consensus       224 ~vddva~ai~~~~~~~~~~g~~~ni~~~~~~s~~el~~~i~~~~g~  269 (657)
T PRK07201        224 PVDYVADALDHLMHKDGRDGQTFHLTDPKPQRVGDIYNAFARAAGA  269 (657)
T ss_pred             eHHHHHHHHHHHhcCcCCCCCEEEeCCCCCCcHHHHHHHHHHHhCC
Confidence            99999999999987655444 7765 46799999999999999854

>PLN02778 3,5-epimerase/4-reductase

Probab=99.97  E-value=2.9e-29  Score=208.54  Aligned_cols=221  Identities=13%  Similarity=0.151  Sum_probs=159.8

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc--CccEEEE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFH   86 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vi~   86 (278)
                      .|+||||||+||||++|++.|+++|+ +|+...                        .|+.|.+.+...++  ++|+|||
T Consensus         9 ~~kiLVtG~tGfiG~~l~~~L~~~g~-~V~~~~------------------------~~~~~~~~v~~~l~~~~~D~ViH   63 (298)
T PLN02778          9 TLKFLIYGKTGWIGGLLGKLCQEQGI-DFHYGS------------------------GRLENRASLEADIDAVKPTHVFN   63 (298)
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCC-EEEEec------------------------CccCCHHHHHHHHHhcCCCEEEE
Confidence            47899999999999999999999999 665321                        34456666666665  6899999


Q ss_pred             ecccCCCC---CCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCC-C--CCccccCCCCCchhhhhcc
Q 023689           87 VASPCTLE---DPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPG-W--KGKVFDETSWTDLEYCKSR  160 (278)
Q Consensus        87 ~a~~~~~~---~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~-~--~~~~~~E~~~~~~~~~~~~  160 (278)
                      +||.....   .+..++..++++|+.++.+++++|++.+++ ++++||.+.+..... .  ...+++|++++.+     +
T Consensus        64 ~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~-~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~-----~  137 (298)
T PLN02778         64 AAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERGLV-LTNYATGCIFEYDDAHPLGSGIGFKEEDTPNF-----T  137 (298)
T ss_pred             CCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCC-EEEEecceEeCCCCCCCcccCCCCCcCCCCCC-----C
Confidence            99976532   234567889999999999999999999986 555676554432111 0  1234677665332     2


Q ss_pred             CchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHHHHHHHHHh
Q 023689          161 KKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVL  240 (278)
Q Consensus       161 ~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  240 (278)
                      .+.|+.+|.++|.++..++     +..++|+...+|+....    ...++..+..+.+...-  ..+++|++|++++++.
T Consensus       138 ~s~Yg~sK~~~E~~~~~y~-----~~~~lr~~~~~~~~~~~----~~~fi~~~~~~~~~~~~--~~s~~yv~D~v~al~~  206 (298)
T PLN02778        138 GSFYSKTKAMVEELLKNYE-----NVCTLRVRMPISSDLSN----PRNFITKITRYEKVVNI--PNSMTILDELLPISIE  206 (298)
T ss_pred             CCchHHHHHHHHHHHHHhh-----ccEEeeecccCCccccc----HHHHHHHHHcCCCeeEc--CCCCEEHHHHHHHHHH
Confidence            3689999999999997664     45678887777764221    22356677766553221  2479999999999999


Q ss_pred             hhcCCCCCceEEe-cCccccHHHHHHHHHHhCC
Q 023689          241 LFESPAASGRYLC-TNGIYQFGDFAERVSKLFP  272 (278)
Q Consensus       241 ~~~~~~~~~~~~~-~~~~~s~~e~~~~i~~~~~  272 (278)
                      ++.+.. .|.|++ +++.+|++|+++.+++.++
T Consensus       207 ~l~~~~-~g~yNigs~~~iS~~el~~~i~~~~~  238 (298)
T PLN02778        207 MAKRNL-TGIYNFTNPGVVSHNEILEMYRDYID  238 (298)
T ss_pred             HHhCCC-CCeEEeCCCCcccHHHHHHHHHHHhC
Confidence            987643 468865 5778999999999999885

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.97  E-value=1.7e-29  Score=217.11  Aligned_cols=227  Identities=17%  Similarity=0.121  Sum_probs=171.5

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcc---cccCCCCCCCceEEEEccCCChhhHHHHhc----
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSH---LFALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~---~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~----   79 (278)
                      .++|+|||||||||||++++++|+++|+ +|++++|+......   ........ .+++++.+|++|++++.++++    
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~-~~v~~v~~Dl~d~~~l~~~~~~~~~  135 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGY-NVVAVAREKSGIRGKNGKEDTKKEL-PGAEVVFGDVTDADSLRKVLFSEGD  135 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEechhhccccchhhHHhhhc-CCceEEEeeCCCHHHHHHHHHHhCC
Confidence            3578999999999999999999999999 89999997643221   01110011 178999999999999999988    


Q ss_pred             CccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhc
Q 023689           80 GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKS  159 (278)
Q Consensus        80 ~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~  159 (278)
                      ++|+||||++....     .....+++|+.++.+++++|++.++++||++||.+++.+                      
T Consensus       136 ~~D~Vi~~aa~~~~-----~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~p----------------------  188 (390)
T PLN02657        136 PVDVVVSCLASRTG-----GVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQKP----------------------  188 (390)
T ss_pred             CCcEEEECCccCCC-----CCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccCc----------------------
Confidence            59999999875321     123557889999999999999999999999998654211                      


Q ss_pred             cCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcc-cc--c-ccCcccHHHHH
Q 023689          160 RKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ-EY--H-WLGAVPVKDVA  235 (278)
Q Consensus       160 ~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~-~~~~i~~~D~a  235 (278)
                       ...|..+|...|+.+..  +..+++++++||+.+|++..        ..+.....+.+... ++  . ..++||++|+|
T Consensus       189 -~~~~~~sK~~~E~~l~~--~~~gl~~tIlRp~~~~~~~~--------~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA  257 (390)
T PLN02657        189 -LLEFQRAKLKFEAELQA--LDSDFTYSIVRPTAFFKSLG--------GQVEIVKDGGPYVMFGDGKLCACKPISEADLA  257 (390)
T ss_pred             -chHHHHHHHHHHHHHHh--ccCCCCEEEEccHHHhcccH--------HHHHhhccCCceEEecCCcccccCceeHHHHH
Confidence             13578899999988764  34799999999999997531        22344455666533 33  2 23679999999


Q ss_pred             HHHHhhhcCCCCC-ceEEecC--ccccHHHHHHHHHHhCCC
Q 023689          236 KAQVLLFESPAAS-GRYLCTN--GIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       236 ~~~~~~~~~~~~~-~~~~~~~--~~~s~~e~~~~i~~~~~~  273 (278)
                      ++++.++.++... .+|++++  +.+|++|+++.+.+.+++
T Consensus       258 ~~i~~~~~~~~~~~~~~~Iggp~~~~S~~Eia~~l~~~lG~  298 (390)
T PLN02657        258 SFIADCVLDESKINKVLPIGGPGKALTPLEQGEMLFRILGK  298 (390)
T ss_pred             HHHHHHHhCccccCCEEEcCCCCcccCHHHHHHHHHHHhCC
Confidence            9999998765443 4676653  589999999999999864

>PLN00016 RNA-binding protein; Provisional

Probab=99.97  E-value=3.3e-29  Score=215.33  Aligned_cols=229  Identities=18%  Similarity=0.179  Sum_probs=168.0

Q ss_pred             CCceEEEe----CcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-----CCCCCCCceEEEEccCCChhhHHHHh
Q 023689            8 EEETVCVT----GANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-----LPGAGDANLRVFEADVLDSGAVSRAV   78 (278)
Q Consensus         8 ~~~~vlIt----GatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-----~~~~~~~~v~~~~~Dl~d~~~~~~~~   78 (278)
                      .+|+||||    |||||||++|+++|+++|+ +|++++|+......+..     +......+++++.+|+.|.+.+. ..
T Consensus        51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~~~-~~  128 (378)
T PLN00016         51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGH-EVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPADVKSKV-AG  128 (378)
T ss_pred             ccceEEEEeccCCCceeEhHHHHHHHHHCCC-EEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHHHHhhh-cc
Confidence            35789999    9999999999999999999 99999997654222110     00001115889999998733222 22


Q ss_pred             cCccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhh
Q 023689           79 EGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCK  158 (278)
Q Consensus        79 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~  158 (278)
                      .++|+|||+++.                +..++.+++++|++.++++||++||..+ |+...  ..+..|+++..+.   
T Consensus       129 ~~~d~Vi~~~~~----------------~~~~~~~ll~aa~~~gvkr~V~~SS~~v-yg~~~--~~p~~E~~~~~p~---  186 (378)
T PLN00016        129 AGFDVVYDNNGK----------------DLDEVEPVADWAKSPGLKQFLFCSSAGV-YKKSD--EPPHVEGDAVKPK---  186 (378)
T ss_pred             CCccEEEeCCCC----------------CHHHHHHHHHHHHHcCCCEEEEEccHhh-cCCCC--CCCCCCCCcCCCc---
Confidence            479999998642                1346889999999999999999999655 44322  2455666554331   


Q ss_pred             ccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcc---cccccCcccHHHHH
Q 023689          159 SRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ---EYHWLGAVPVKDVA  235 (278)
Q Consensus       159 ~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~D~a  235 (278)
                            . +|..+|.+++    +.+++++++||+++||+.....  ....++..+..+.+..+   +.+.++++|++|+|
T Consensus       187 ------~-sK~~~E~~l~----~~~l~~~ilRp~~vyG~~~~~~--~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva  253 (378)
T PLN00016        187 ------A-GHLEVEAYLQ----KLGVNWTSFRPQYIYGPGNNKD--CEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLA  253 (378)
T ss_pred             ------c-hHHHHHHHHH----HcCCCeEEEeceeEECCCCCCc--hHHHHHHHHHcCCceeecCCCCeeeceecHHHHH
Confidence                  1 7999998775    5699999999999999975432  34455666667766544   34678999999999


Q ss_pred             HHHHhhhcCCCC-CceEEec-CccccHHHHHHHHHHhCCC
Q 023689          236 KAQVLLFESPAA-SGRYLCT-NGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       236 ~~~~~~~~~~~~-~~~~~~~-~~~~s~~e~~~~i~~~~~~  273 (278)
                      ++++.++.++.. +++|+++ ++.+|+.|+++.+.+.++.
T Consensus       254 ~ai~~~l~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~  293 (378)
T PLN00016        254 SMFALVVGNPKAAGQIFNIVSDRAVTFDGMAKACAKAAGF  293 (378)
T ss_pred             HHHHHHhcCccccCCEEEecCCCccCHHHHHHHHHHHhCC
Confidence            999999988654 3467655 6689999999999998853

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.96  E-value=2.1e-29  Score=204.54  Aligned_cols=218  Identities=25%  Similarity=0.254  Sum_probs=130.8

Q ss_pred             EeCcchhhHHHHHHHHHHCCC-CeEEEEecCCCCCccccc----CCCC---------CCCceEEEEccCCCh------hh
Q 023689           14 VTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFA----LPGA---------GDANLRVFEADVLDS------GA   73 (278)
Q Consensus        14 ItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~~~----~~~~---------~~~~v~~~~~Dl~d~------~~   73 (278)
                      |||||||+|++|+++|++.+. ..|++++|..+.....+.    +...         ...+++++.+|++++      +.
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999875 289999997644222111    1110         023999999999885      56


Q ss_pred             HHHHhcCccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCC---
Q 023689           74 VSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETS---  150 (278)
Q Consensus        74 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~---  150 (278)
                      ++++.+++|+|||+|+...+   ..++...+++|+.|+.++++.|.+...++|+|+|| +.+.+....   ...|..   
T Consensus        81 ~~~L~~~v~~IiH~Aa~v~~---~~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iST-a~v~~~~~~---~~~~~~~~~  153 (249)
T PF07993_consen   81 YQELAEEVDVIIHCAASVNF---NAPYSELRAVNVDGTRNLLRLAAQGKRKRFHYIST-AYVAGSRPG---TIEEKVYPE  153 (249)
T ss_dssp             HHHHHHH--EEEE--SS-SB---S-S--EEHHHHHHHHHHHHHHHTSSS---EEEEEE-GGGTTS-TT---T--SSS-HH
T ss_pred             hhccccccceeeecchhhhh---cccchhhhhhHHHHHHHHHHHHHhccCcceEEecc-ccccCCCCC---ccccccccc
Confidence            77778899999999998775   34667799999999999999999776679999998 444433221   111110   


Q ss_pred             -CCchhhhhccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCC---CchhHH-HHHHHhhCCCCccc---
Q 023689          151 -WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY---LNASCA-VLQQLLQGSKDTQE---  222 (278)
Q Consensus       151 -~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~---~~~~~~-~~~~~~~~~~~~~~---  222 (278)
                       ...........+.|..||+++|++++.++++.|++++++|||.|+|......   ...... +......+..+...   
T Consensus       154 ~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~  233 (249)
T PF07993_consen  154 EEDDLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGAFPDLPGDP  233 (249)
T ss_dssp             H--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-EEES-SB--
T ss_pred             ccccchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCCcccccCCC
Confidence             0001111223368999999999999999988899999999999999544433   232333 33334444433232   


Q ss_pred             ccccCcccHHHHHHHH
Q 023689          223 YHWLGAVPVKDVAKAQ  238 (278)
Q Consensus       223 ~~~~~~i~~~D~a~~~  238 (278)
                      +...+++++|.+|+++
T Consensus       234 ~~~~d~vPVD~va~aI  249 (249)
T PF07993_consen  234 DARLDLVPVDYVARAI  249 (249)
T ss_dssp             -TT--EEEHHHHHHHH
T ss_pred             CceEeEECHHHHHhhC
Confidence            2569999999999985

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.96  E-value=2.5e-27  Score=185.21  Aligned_cols=234  Identities=19%  Similarity=0.215  Sum_probs=171.1

Q ss_pred             EEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc-CccEEEEeccc
Q 023689           12 VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-GCKGVFHVASP   90 (278)
Q Consensus        12 vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-~~d~vi~~a~~   90 (278)
                      |+|||||||||++|+.+|.+.|| .|+.++|++.........      .       +...+.+.+... ++|+|||+||.
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh-~v~iltR~~~~~~~~~~~------~-------v~~~~~~~~~~~~~~DavINLAG~   66 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGH-QVTILTRRPPKASQNLHP------N-------VTLWEGLADALTLGIDAVINLAGE   66 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCC-eEEEEEcCCcchhhhcCc------c-------ccccchhhhcccCCCCEEEECCCC
Confidence            68999999999999999999999 999999988765442211      1       112234555555 79999999997


Q ss_pred             CCCCC-CC-CchhhhhhhHHhHHHHHHHHHHhc--CCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhh
Q 023689           91 CTLED-PV-DPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPV  166 (278)
Q Consensus        91 ~~~~~-~~-~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~  166 (278)
                      .-.+. |. +.-+..++.-+..|..|.++..+.  +++.+|. +|..++|++..  ...++|+++....+       -+.
T Consensus        67 ~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~is-aSAvGyYG~~~--~~~~tE~~~~g~~F-------la~  136 (297)
T COG1090          67 PIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLIS-ASAVGYYGHSG--DRVVTEESPPGDDF-------LAQ  136 (297)
T ss_pred             ccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEe-cceEEEecCCC--ceeeecCCCCCCCh-------HHH
Confidence            66543 22 233667778899999999988754  4555665 45678888765  48899997654432       222


Q ss_pred             HHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHHHHHHHHHhhhcCCC
Q 023689          167 SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA  246 (278)
Q Consensus       167 sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~  246 (278)
                      ....=|+.... ++..|.+++.+|.|.|.++.......  .....+...|.++..+.++++|||++|+++++.+++++..
T Consensus       137 lc~~WE~~a~~-a~~~gtRvvllRtGvVLs~~GGaL~~--m~~~fk~glGG~~GsGrQ~~SWIhieD~v~~I~fll~~~~  213 (297)
T COG1090         137 LCQDWEEEALQ-AQQLGTRVVLLRTGVVLSPDGGALGK--MLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLLENEQ  213 (297)
T ss_pred             HHHHHHHHHhh-hhhcCceEEEEEEEEEecCCCcchhh--hcchhhhccCCccCCCCceeeeeeHHHHHHHHHHHHhCcC
Confidence            22222333322 22459999999999999986543311  1223456678888888999999999999999999999988


Q ss_pred             CCceEE-ecCccccHHHHHHHHHHhCC
Q 023689          247 ASGRYL-CTNGIYQFGDFAERVSKLFP  272 (278)
Q Consensus       247 ~~~~~~-~~~~~~s~~e~~~~i~~~~~  272 (278)
                      ..|.|| .++.+++..+|.+++.+.+.
T Consensus       214 lsGp~N~taP~PV~~~~F~~al~r~l~  240 (297)
T COG1090         214 LSGPFNLTAPNPVRNKEFAHALGRALH  240 (297)
T ss_pred             CCCcccccCCCcCcHHHHHHHHHHHhC
Confidence            888765 56889999999999999984

>PRK05865 hypothetical protein; Provisional

Probab=99.96  E-value=2.4e-27  Score=216.69  Aligned_cols=197  Identities=25%  Similarity=0.234  Sum_probs=155.1

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEecc
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a~   89 (278)
                      |+|||||||||||++++++|+++|+ .|++++|+....  ..       .+++++.+|++|.+++.++++++|+|||+|+
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G~-~Vv~l~R~~~~~--~~-------~~v~~v~gDL~D~~~l~~al~~vD~VVHlAa   70 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQGH-EVVGIARHRPDS--WP-------SSADFIAADIRDATAVESAMTGADVVAHCAW   70 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcC-EEEEEECCchhh--cc-------cCceEEEeeCCCHHHHHHHHhCCCEEEECCC
Confidence            4799999999999999999999999 899998864321  10       1678999999999999999999999999997


Q ss_pred             cCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhhHHH
Q 023689           90 PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKT  169 (278)
Q Consensus        90 ~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~  169 (278)
                      ...         ..+++|+.++.+++++|++.++++||++||..                                  |.
T Consensus        71 ~~~---------~~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~----------------------------------K~  107 (854)
T PRK05865         71 VRG---------RNDHINIDGTANVLKAMAETGTGRIVFTSSGH----------------------------------QP  107 (854)
T ss_pred             ccc---------chHHHHHHHHHHHHHHHHHcCCCeEEEECCcH----------------------------------HH
Confidence            532         15689999999999999999999999999721                                  77


Q ss_pred             HHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccc--ccccCcccHHHHHHHHHhhhcCCC-
Q 023689          170 LAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQE--YHWLGAVPVKDVAKAQVLLFESPA-  246 (278)
Q Consensus       170 ~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~D~a~~~~~~~~~~~-  246 (278)
                      .+|+++.    +++++++++||+++||+...       .++..+........+  ...++++|++|+|+++..++++.. 
T Consensus       108 aaE~ll~----~~gl~~vILRp~~VYGP~~~-------~~i~~ll~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~~  176 (854)
T PRK05865        108 RVEQMLA----DCGLEWVAVRCALIFGRNVD-------NWVQRLFALPVLPAGYADRVVQVVHSDDAQRLLVRALLDTVI  176 (854)
T ss_pred             HHHHHHH----HcCCCEEEEEeceEeCCChH-------HHHHHHhcCceeccCCCCceEeeeeHHHHHHHHHHHHhCCCc
Confidence            7887664    57999999999999999621       223332221111222  246799999999999999986543 


Q ss_pred             CCceEEe-cCccccHHHHHHHHHHh
Q 023689          247 ASGRYLC-TNGIYQFGDFAERVSKL  270 (278)
Q Consensus       247 ~~~~~~~-~~~~~s~~e~~~~i~~~  270 (278)
                      ..++|++ +++.+|++|+++.+.+.
T Consensus       177 ~ggvyNIgsg~~~Si~EIae~l~~~  201 (854)
T PRK05865        177 DSGPVNLAAPGELTFRRIAAALGRP  201 (854)
T ss_pred             CCCeEEEECCCcccHHHHHHHHhhh
Confidence            3467755 57789999999999874

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.96  E-value=6.6e-28  Score=197.56  Aligned_cols=226  Identities=20%  Similarity=0.199  Sum_probs=160.3

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc---
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE---   79 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---   79 (278)
                      |..+++|++|||||+|+||++++++|+++|+ .|++..|+++...... .+.... .++.++++|++|.+++.++++   
T Consensus         2 ~~~~~~~~vlItGasg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~   79 (262)
T PRK13394          2 MSNLNGKTAVVTGAASGIGKEIALELARAGA-AVAIADLNQDGANAVADEINKAG-GKAIGVAMDVTNEDAVNAGIDKVA   79 (262)
T ss_pred             cccCCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHhcC-ceEEEEECCCCCHHHHHHHHHHHH
Confidence            4456689999999999999999999999999 8888888765432222 121112 268889999999998888765   


Q ss_pred             ----CccEEEEecccCCCC----CCCCchhhhhhhHHhH----HHHHHHHH-HhcCCCEEEEecceeeeecCCCCCCccc
Q 023689           80 ----GCKGVFHVASPCTLE----DPVDPEKELILPAVQG----TLNVLEAA-KRFGVRRVVVTSSISAIVPNPGWKGKVF  146 (278)
Q Consensus        80 ----~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~----~~~ll~~~-~~~~~~~~v~~Ss~~~~~~~~~~~~~~~  146 (278)
                          ++|+|||+|+.....    ...+.++..+++|+.+    +.++++++ ++.+.++||++||..+..+.+.      
T Consensus        80 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~~~------  153 (262)
T PRK13394         80 ERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPL------  153 (262)
T ss_pred             HHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCCCC------
Confidence                379999999875432    1234567788899999    66677777 6667889999999665443222      


Q ss_pred             cCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCch--------hHHHHHHHhh
Q 023689          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNA--------SCAVLQQLLQ  215 (278)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~--------~~~~~~~~~~  215 (278)
                                    ...|+.+|...+.+++.++.+   .+++++++||+.++|+........        ..........
T Consensus       154 --------------~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (262)
T PRK13394        154 --------------KSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVML  219 (262)
T ss_pred             --------------CcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHh
Confidence                          146999999998888887765   489999999999999864322100        1112222222


Q ss_pred             CCCCcccccccCcccHHHHHHHHHhhhcCCCC--Cce-EEecCc
Q 023689          216 GSKDTQEYHWLGAVPVKDVAKAQVLLFESPAA--SGR-YLCTNG  256 (278)
Q Consensus       216 ~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~~-~~~~~~  256 (278)
                      +.     ....++++++|++++++.++.....  .|. |++.++
T Consensus       220 ~~-----~~~~~~~~~~dva~a~~~l~~~~~~~~~g~~~~~~~g  258 (262)
T PRK13394        220 GK-----TVDGVFTTVEDVAQTVLFLSSFPSAALTGQSFVVSHG  258 (262)
T ss_pred             cC-----CCCCCCCCHHHHHHHHHHHcCccccCCcCCEEeeCCc
Confidence            21     2357899999999999999876533  354 455443

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.5e-27  Score=195.62  Aligned_cols=232  Identities=21%  Similarity=0.194  Sum_probs=165.8

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc-------Ccc
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GCK   82 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d   82 (278)
                      |++|||||+||||++++++|+++|+ .|++..|+.+....+....  . .++.++++|++|.+++.++++       ++|
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~--~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   78 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGD-RVAATVRRPDALDDLKARY--G-DRLWVLQLDVTDSAAVRAVVDRAFAALGRID   78 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhc--c-CceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            6899999999999999999999999 8998888765433322211  1 278899999999998887764       479


Q ss_pred             EEEEecccCCCCC----CCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccCCCCCch
Q 023689           83 GVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDL  154 (278)
Q Consensus        83 ~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~  154 (278)
                      +|||+||......    ..+.++..+++|+.++.++++++    ++.+.++||++||..+..+.+.              
T Consensus        79 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------  144 (276)
T PRK06482         79 VVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYPG--------------  144 (276)
T ss_pred             EEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCCCC--------------
Confidence            9999999765422    12345778899999999999987    5566789999999665433222              


Q ss_pred             hhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEeccee---eCCCCCCC------CchhHHHHHHHhhCCCCccc
Q 023689          155 EYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATC---LGPLMQPY------LNASCAVLQQLLQGSKDTQE  222 (278)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i---~g~~~~~~------~~~~~~~~~~~~~~~~~~~~  222 (278)
                            .+.|+.+|.+.|.+.+.++.+   +|++++++|||.+   ||+.....      .......+.+.....+.   
T Consensus       145 ------~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  215 (276)
T PRK06482        145 ------FSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGSF---  215 (276)
T ss_pred             ------CchhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhccC---
Confidence                  257999999999999888765   6999999999988   44332211      00111112222222221   


Q ss_pred             ccccCcccHHHHHHHHHhhhcCCCCCceEEec-CccccHHHHHHHHHHhC
Q 023689          223 YHWLGAVPVKDVAKAQVLLFESPAASGRYLCT-NGIYQFGDFAERVSKLF  271 (278)
Q Consensus       223 ~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~i~~~~  271 (278)
                         .-+.+++|++++++.++.++.....|+++ +...++.|+++.+.+.+
T Consensus       216 ---~~~~d~~~~~~a~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  262 (276)
T PRK06482        216 ---AIPGDPQKMVQAMIASADQTPAPRRLTLGSDAYASIRAALSERLAAL  262 (276)
T ss_pred             ---CCCCCHHHHHHHHHHHHcCCCCCeEEecChHHHHHHHHHHHHHHHHH
Confidence               12468999999999999876555567665 55677777777666544

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.96  E-value=7.6e-28  Score=196.68  Aligned_cols=254  Identities=24%  Similarity=0.211  Sum_probs=173.0

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccC----C------CCCCCceEEEEccCCCh------hh
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL----P------GAGDANLRVFEADVLDS------GA   73 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~----~------~~~~~~v~~~~~Dl~d~------~~   73 (278)
                      +++|+||||||+|++|+..|+..-.-+|+|++|..+......++    .      .....+++.+.+|+..+      ..
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            47999999999999999999976444899999977643332221    1      12233899999999843      67


Q ss_pred             HHHHhcCccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCC-CccccCCCCC
Q 023689           74 VSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWK-GKVFDETSWT  152 (278)
Q Consensus        74 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~-~~~~~E~~~~  152 (278)
                      ++++.+++|.|||+|+..+.   ..++.+....|+.||..+++.|...+.|.++|+||+++........ ..-..|+++.
T Consensus        81 ~~~La~~vD~I~H~gA~Vn~---v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~  157 (382)
T COG3320          81 WQELAENVDLIIHNAALVNH---VFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEISPT  157 (382)
T ss_pred             HHHHhhhcceEEecchhhcc---cCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCcccccccccc
Confidence            88889999999999998664   5778999999999999999999988888999999988776543321 1111122222


Q ss_pred             chhhhhccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCC---CchhHHHHHHHhh-CCCCcccccccCc
Q 023689          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY---LNASCAVLQQLLQ-GSKDTQEYHWLGA  228 (278)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~  228 (278)
                      .. ......+.|++||+.+|.++++.... |++++++|||.|.|+.....   ..+...+.....+ |..+.. ....+.
T Consensus       158 ~~-~~~~~~~GY~~SKwvaE~Lvr~A~~r-GLpv~I~Rpg~I~gds~tG~~n~~D~~~Rlv~~~~~lg~~P~~-~~~~~~  234 (382)
T COG3320         158 RN-VGQGLAGGYGRSKWVAEKLVREAGDR-GLPVTIFRPGYITGDSRTGALNTRDFLTRLVLGLLQLGIAPDS-EYSLDM  234 (382)
T ss_pred             cc-ccCccCCCcchhHHHHHHHHHHHhhc-CCCeEEEecCeeeccCccCccccchHHHHHHHHHHHhCCCCCc-ccchhh
Confidence            21 12334478999999999999998866 99999999999999977333   2233344333332 222211 123444


Q ss_pred             ccHHHHHHHH-----------HhhhcCCC-CCceEE--ecCccccHHHHHHHHHH
Q 023689          229 VPVKDVAKAQ-----------VLLFESPA-ASGRYL--CTNGIYQFGDFAERVSK  269 (278)
Q Consensus       229 i~~~D~a~~~-----------~~~~~~~~-~~~~~~--~~~~~~s~~e~~~~i~~  269 (278)
                      ++++++++++           ..+..++. .-.+|.  .-+..+.+.++.+.+.+
T Consensus       235 ~p~~~v~~~v~~~~~~~~~~~~~l~~~~~~~f~~~~~~~~~~~i~l~~~~~w~~~  289 (382)
T COG3320         235 LPVDHVARAVVAPSVQVAEAIAALGAHSDIRFNQLHMLTHPDEIGLDEYVDWLIS  289 (382)
T ss_pred             CccceeeEEeehhhhhHHHHHHHhccCccchhhheecccCCCccchhHHHHhHhh
Confidence            4444443333           33332111 112343  33678899999988877

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.96  E-value=4.7e-27  Score=208.46  Aligned_cols=259  Identities=16%  Similarity=0.179  Sum_probs=176.0

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCC--CeEEEEecCCCCCcccccC----C------------CC-----CCCceEEE
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNY--TSINATVFPGSDSSHLFAL----P------------GA-----GDANLRVF   64 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~--~~v~~~~r~~~~~~~~~~~----~------------~~-----~~~~v~~~   64 (278)
                      ++|+|||||||||||++|+++|++.+.  ..|++++|........+.+    .            +.     ...+++++
T Consensus       118 ~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v  197 (605)
T PLN02503        118 RGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPV  197 (605)
T ss_pred             cCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEE
Confidence            579999999999999999999998754  3789999965433211111    0            00     01278999


Q ss_pred             EccCCCh------hhHHHHhcCccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhc-CCCEEEEecceeeeec
Q 023689           65 EADVLDS------GAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-GVRRVVVTSSISAIVP  137 (278)
Q Consensus        65 ~~Dl~d~------~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~v~~Ss~~~~~~  137 (278)
                      .+|++++      +..+.+.+++|+|||+|+....   ..+++..+++|+.|+.+++++|++. ++++||++||.+.+ +
T Consensus       198 ~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f---~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVy-G  273 (605)
T PLN02503        198 VGNVCESNLGLEPDLADEIAKEVDVIINSAANTTF---DERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVN-G  273 (605)
T ss_pred             EeeCCCcccCCCHHHHHHHHhcCCEEEECcccccc---ccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceee-c
Confidence            9999987      4566677789999999998664   2457889999999999999999886 57889999986554 4


Q ss_pred             CCCCCCccccCCCCC----------------------ch-----------h--------------------hhhccCchh
Q 023689          138 NPGWKGKVFDETSWT----------------------DL-----------E--------------------YCKSRKKWY  164 (278)
Q Consensus       138 ~~~~~~~~~~E~~~~----------------------~~-----------~--------------------~~~~~~~~y  164 (278)
                      ...   ..+.|..++                      ++           .                    ....-.+.|
T Consensus       274 ~~~---G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtY  350 (605)
T PLN02503        274 QRQ---GRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTY  350 (605)
T ss_pred             CCC---CeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChH
Confidence            331   123333221                      00           0                    001112689


Q ss_pred             hhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCc------hhHHHHHHHhhCCCCcc---cccccCcccHHHHH
Q 023689          165 PVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLN------ASCAVLQQLLQGSKDTQ---EYHWLGAVPVKDVA  235 (278)
Q Consensus       165 ~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~------~~~~~~~~~~~~~~~~~---~~~~~~~i~~~D~a  235 (278)
                      ..||.++|.++....  .+++++++||+.|.+....+...      .....+.....|....+   ++...|.|++|.++
T Consensus       351 t~TK~lAE~lV~~~~--~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~~~~DiVPVD~vv  428 (605)
T PLN02503        351 VFTKAMGEMVINSMR--GDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDVVPADMVV  428 (605)
T ss_pred             HHHHHHHHHHHHHhc--CCCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCCCeeEeEEeecHHH
Confidence            999999999998553  48999999999995533222110      01111111123332212   44789999999999


Q ss_pred             HHHHhhhcC-C---C-CCceEEec-C--ccccHHHHHHHHHHhCCCCC
Q 023689          236 KAQVLLFES-P---A-ASGRYLCT-N--GIYQFGDFAERVSKLFPEFP  275 (278)
Q Consensus       236 ~~~~~~~~~-~---~-~~~~~~~~-~--~~~s~~e~~~~i~~~~~~~~  275 (278)
                      .+++.+... .   . ...+|+++ +  .++++.++.+.+.+.+.+.|
T Consensus       429 na~i~a~a~~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~~~P  476 (605)
T PLN02503        429 NATLAAMAKHGGAAKPEINVYQIASSVVNPLVFQDLARLLYEHYKSSP  476 (605)
T ss_pred             HHHHHHHHhhhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHhhCC
Confidence            999888432 1   1 22378764 4  58999999999998774433

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.95  E-value=1.3e-26  Score=181.08  Aligned_cols=253  Identities=19%  Similarity=0.190  Sum_probs=201.3

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcc----cccCCCCCCCceEEEEccCCChhhHHHHhc--Ccc
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSH----LFALPGAGDANLRVFEADVLDSGAVSRAVE--GCK   82 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~----~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d   82 (278)
                      +|++||||-||+-|++|++.|++.|+ +|.++.|+.+....    +...+-....+++++.+|++|...+.++++  .+|
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY-~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~Pd   80 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGY-EVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPD   80 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCc-EEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCch
Confidence            58999999999999999999999999 99999986544322    223322233368899999999999999998  569


Q ss_pred             EEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCC--CEEEEecceeeeecCCCCCCccccCCCCCchhhhhcc
Q 023689           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV--RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSR  160 (278)
Q Consensus        83 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~--~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  160 (278)
                      -|+|+|+..++..+++.+....+++..|+.+||++.+-.+.  .+|...|| +..|+...  ..+.+|++|..|.     
T Consensus        81 EIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQASt-SE~fG~v~--~~pq~E~TPFyPr-----  152 (345)
T COG1089          81 EIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQAST-SELYGLVQ--EIPQKETTPFYPR-----  152 (345)
T ss_pred             hheeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEeccc-HHhhcCcc--cCccccCCCCCCC-----
Confidence            99999999998888889999999999999999999998763  34555554 77776544  4889999988885     


Q ss_pred             CchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCC--CchhHHHHHHHhhCCCCcc--c--ccccCcccHHHH
Q 023689          161 KKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY--LNASCAVLQQLLQGSKDTQ--E--YHWLGAVPVKDV  234 (278)
Q Consensus       161 ~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~--~~~~~~~~~~~~~~~~~~~--~--~~~~~~i~~~D~  234 (278)
                       ++|+.+|..+..+...|.+.+|+-.+.=...+--+|.+...  ...+...+.++..|.....  +  +..|||-|+.|.
T Consensus       153 -SPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DY  231 (345)
T COG1089         153 -SPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDY  231 (345)
T ss_pred             -CHHHHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHHH
Confidence             79999999999999999999998777766666667765443  2344555555556655443  4  389999999999


Q ss_pred             HHHHHhhhcCCCCCceE-EecCccccHHHHHHHHHHhCC
Q 023689          235 AKAQVLLFESPAASGRY-LCTNGIYQFGDFAERVSKLFP  272 (278)
Q Consensus       235 a~~~~~~~~~~~~~~~~-~~~~~~~s~~e~~~~i~~~~~  272 (278)
                      ++++...+.++.+ ..| +.+++..|++|+++...+..+
T Consensus       232 Ve~mwlmLQq~~P-ddyViATg~t~sVrefv~~Af~~~g  269 (345)
T COG1089         232 VEAMWLMLQQEEP-DDYVIATGETHSVREFVELAFEMVG  269 (345)
T ss_pred             HHHHHHHHccCCC-CceEEecCceeeHHHHHHHHHHHcC
Confidence            9999988887764 345 667899999999998887764

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=99.95  E-value=3e-27  Score=178.70  Aligned_cols=238  Identities=18%  Similarity=0.187  Sum_probs=183.9

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCC--CeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc--CccEE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNY--TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGV   84 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~--~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~v   84 (278)
                      ||||||||++|.+|+++.+.+.+.|.  ++.+.....                     .+|+++..+.+++++  ++..|
T Consensus         1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~sk---------------------d~DLt~~a~t~~lF~~ekPthV   59 (315)
T KOG1431|consen    1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGSK---------------------DADLTNLADTRALFESEKPTHV   59 (315)
T ss_pred             CceEEEecCCchHHHHHHHHHHhcCCCCcceEEeccc---------------------cccccchHHHHHHHhccCCcee
Confidence            57999999999999999999998876  222222111                     189999999999987  57999


Q ss_pred             EEecccCCC-CCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCch
Q 023689           85 FHVASPCTL-EDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW  163 (278)
Q Consensus        85 i~~a~~~~~-~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  163 (278)
                      ||+|+..+. -........++..|+....|+++.|-++|+++++++.|++.+.   .....|++|+..+..++ .+..-.
T Consensus        60 IhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfP---dkt~yPIdEtmvh~gpp-hpsN~g  135 (315)
T KOG1431|consen   60 IHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFP---DKTSYPIDETMVHNGPP-HPSNFG  135 (315)
T ss_pred             eehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecC---CCCCCCCCHHHhccCCC-CCCchH
Confidence            999986553 2334566789999999999999999999999999998867643   23348899988655432 222246


Q ss_pred             hhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCC---CchhHHHHHHHh----hCC-CCcc---cccccCcccHH
Q 023689          164 YPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY---LNASCAVLQQLL----QGS-KDTQ---EYHWLGAVPVK  232 (278)
Q Consensus       164 y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~---~~~~~~~~~~~~----~~~-~~~~---~~~~~~~i~~~  232 (278)
                      |+..|.++.-..+.|..++|..++++-|.++|||.+...   ...++.+++++-    .|. ++.+   +...|+|+|.+
T Consensus       136 YsyAKr~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~  215 (315)
T KOG1431|consen  136 YSYAKRMIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSD  215 (315)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHh
Confidence            999999999888999999999999999999999987654   345666666543    233 2222   44789999999


Q ss_pred             HHHHHHHhhhcCCCCCc-eEEecCc--cccHHHHHHHHHHhC
Q 023689          233 DVAKAQVLLFESPAASG-RYLCTNG--IYQFGDFAERVSKLF  271 (278)
Q Consensus       233 D~a~~~~~~~~~~~~~~-~~~~~~~--~~s~~e~~~~i~~~~  271 (278)
                      |+|+++++++++-+.-. +.+.+++  .+|++|+++++.+++
T Consensus       216 DLA~l~i~vlr~Y~~vEpiils~ge~~EVtI~e~aeaV~ea~  257 (315)
T KOG1431|consen  216 DLADLFIWVLREYEGVEPIILSVGESDEVTIREAAEAVVEAV  257 (315)
T ss_pred             HHHHHHHHHHHhhcCccceEeccCccceeEHHHHHHHHHHHh
Confidence            99999999998754333 4555666  899999999999986

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.3e-26  Score=191.29  Aligned_cols=223  Identities=17%  Similarity=0.138  Sum_probs=159.0

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc-------Cc
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~   81 (278)
                      +|++|||||+|+||++++++|+++|+ +|+++.|+++....+...   ...++.++.+|++|++++.++++       ++
T Consensus         4 ~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~l~~~---~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~   79 (277)
T PRK06180          4 MKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEAARADFEAL---HPDRALARLLDVTDFDAIDAVVADAEATFGPI   79 (277)
T ss_pred             CCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHHHHHHHHhh---cCCCeeEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            57899999999999999999999999 899999876544333221   11268889999999999888776       47


Q ss_pred             cEEEEecccCCCCC----CCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccCCCCCc
Q 023689           82 KGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (278)
Q Consensus        82 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~  153 (278)
                      |+|||+||......    ..+.+...+++|+.++.++++++    ++.+.+++|++||.++..+.++.            
T Consensus        80 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~~~------------  147 (277)
T PRK06180         80 DVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPGI------------  147 (277)
T ss_pred             CEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCCCc------------
Confidence            99999999754321    22345677999999999999885    44556799999997776543332            


Q ss_pred             hhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCC----chhHHH---HHHHhhCCCCcccc
Q 023689          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYL----NASCAV---LQQLLQGSKDTQEY  223 (278)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~----~~~~~~---~~~~~~~~~~~~~~  223 (278)
                              ..|+.+|...+.+.+.++.+   +|++++++|||.+.++......    ......   ........   ...
T Consensus       148 --------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~  216 (277)
T PRK06180        148 --------GYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAR---EAK  216 (277)
T ss_pred             --------chhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHH---Hhh
Confidence                    57999999999988888764   5999999999999887532211    011111   11110000   001


Q ss_pred             cccCcccHHHHHHHHHhhhcCCCCCceEEecCccc
Q 023689          224 HWLGAVPVKDVAKAQVLLFESPAASGRYLCTNGIY  258 (278)
Q Consensus       224 ~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~~~  258 (278)
                      ....+.+++|+|++++.+++++.....|+.+.+..
T Consensus       217 ~~~~~~~~~dva~~~~~~l~~~~~~~~~~~g~~~~  251 (277)
T PRK06180        217 SGKQPGDPAKAAQAILAAVESDEPPLHLLLGSDAL  251 (277)
T ss_pred             ccCCCCCHHHHHHHHHHHHcCCCCCeeEeccHHHH
Confidence            12446789999999999998776655676665443

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.95  E-value=1.8e-26  Score=178.40  Aligned_cols=214  Identities=19%  Similarity=0.173  Sum_probs=161.8

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc----
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~----   79 (278)
                      |+..++|.++|||||++||.++++.|.+.|+ .|++..|+.+..+.+..-...  ..+..+..|++|++++..+++    
T Consensus         1 m~~~~~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~--~~~~~~~~DVtD~~~~~~~i~~~~~   77 (246)
T COG4221           1 MTTLKGKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGA--GAALALALDVTDRAAVEAAIEALPE   77 (246)
T ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhcc--CceEEEeeccCCHHHHHHHHHHHHH
Confidence            5566779999999999999999999999999 899999988766665432221  268899999999988666654    


Q ss_pred             ---CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHH----HHhcCCCEEEEecceeeeecCCCCCCccccC
Q 023689           80 ---GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEA----AKRFGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (278)
Q Consensus        80 ---~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~----~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E  148 (278)
                         ++|++|||||....    +...++|+.++++|+.|..+..++    +.+++.+.+|++||+++.++.++.       
T Consensus        78 ~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~-------  150 (246)
T COG4221          78 EFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGG-------  150 (246)
T ss_pred             hhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCC-------
Confidence               68999999997554    234568999999998776665554    566677799999999998887664       


Q ss_pred             CCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCC-chhHHHHHHHhhCCCCccccc
Q 023689          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYL-NASCAVLQQLLQGSKDTQEYH  224 (278)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  224 (278)
                                   +.|+.+|+....+...+..+   ++++++.+.||.+-+....... ........+...         
T Consensus       151 -------------~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y~---------  208 (246)
T COG4221         151 -------------AVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKVYK---------  208 (246)
T ss_pred             -------------ccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCchhhhHHHHhc---------
Confidence                         67999999888777666654   4899999999999665433221 111222223222         


Q ss_pred             ccCcccHHHHHHHHHhhhcCCCCCc
Q 023689          225 WLGAVPVKDVAKAQVLLFESPAASG  249 (278)
Q Consensus       225 ~~~~i~~~D~a~~~~~~~~~~~~~~  249 (278)
                      ....+.++|+|+.+.+++.+|..-.
T Consensus       209 ~~~~l~p~dIA~~V~~~~~~P~~vn  233 (246)
T COG4221         209 GGTALTPEDIAEAVLFAATQPQHVN  233 (246)
T ss_pred             cCCCCCHHHHHHHHHHHHhCCCccc
Confidence            3456899999999999999987643

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.7e-26  Score=190.51  Aligned_cols=231  Identities=20%  Similarity=0.130  Sum_probs=169.2

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc-------Cc
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~   81 (278)
                      +|+||||||+|+||++++++|+++|+ .|+++.|+.+..+.+....   ...+.++++|++|++++.++++       ++
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALERGD-RVVATARDTATLADLAEKY---GDRLLPLALDVTDRAAVFAAVETAVEHFGRL   78 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhc---cCCeeEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            47899999999999999999999999 8999988765433322211   1167889999999998877765       57


Q ss_pred             cEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccCCCCCc
Q 023689           82 KGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (278)
Q Consensus        82 d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~  153 (278)
                      |+|||+||.....    ...+.++..+++|+.++..+++++    ++.+.+++|++||.+++.+.+..            
T Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~------------  146 (275)
T PRK08263         79 DIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPMS------------  146 (275)
T ss_pred             CEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCCc------------
Confidence            9999999976542    223467888999999987777765    55667899999997776554332            


Q ss_pred             hhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCC------chhHHHHHHHhhCCCCccccc
Q 023689          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYL------NASCAVLQQLLQGSKDTQEYH  224 (278)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~------~~~~~~~~~~~~~~~~~~~~~  224 (278)
                              ..|+.+|...+.+.+.++.+   +|++++++|||.+.++......      .........+....      .
T Consensus       147 --------~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~------~  212 (275)
T PRK08263        147 --------GIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQW------S  212 (275)
T ss_pred             --------cHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHH------H
Confidence                    57999999999888888764   6999999999999887643210      00111111111111      1


Q ss_pred             ccCc-ccHHHHHHHHHhhhcCCCCCceEEecC--ccccHHHHHHHHHH
Q 023689          225 WLGA-VPVKDVAKAQVLLFESPAASGRYLCTN--GIYQFGDFAERVSK  269 (278)
Q Consensus       225 ~~~~-i~~~D~a~~~~~~~~~~~~~~~~~~~~--~~~s~~e~~~~i~~  269 (278)
                      ...+ ++++|+|++++.+++.+...+.|+++.  +.+++.++.+.+.+
T Consensus       213 ~~~~~~~p~dva~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (275)
T PRK08263        213 ERSVDGDPEAAAEALLKLVDAENPPLRLFLGSGVLDLAKADYERRLAT  260 (275)
T ss_pred             hccCCCCHHHHHHHHHHHHcCCCCCeEEEeCchHHHHHHHHHHHHHHH
Confidence            2345 899999999999999877767776554  46788888888776

>PRK12320 hypothetical protein; Provisional

Probab=99.95  E-value=1.1e-25  Score=201.93  Aligned_cols=203  Identities=17%  Similarity=0.159  Sum_probs=152.3

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEecc
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a~   89 (278)
                      ||||||||+||||++|+++|+++|+ +|++++|.+....        . .+++++.+|++|+. +.++++++|+|||+|+
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~~G~-~Vi~ldr~~~~~~--------~-~~ve~v~~Dl~d~~-l~~al~~~D~VIHLAa   69 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIAAGH-TVSGIAQHPHDAL--------D-PRVDYVCASLRNPV-LQELAGEADAVIHLAP   69 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCC-EEEEEeCChhhcc--------c-CCceEEEccCCCHH-HHHHhcCCCEEEEcCc
Confidence            4899999999999999999999999 9999988643211        0 17889999999985 7888889999999998


Q ss_pred             cCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhhHHH
Q 023689           90 PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKT  169 (278)
Q Consensus        90 ~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~  169 (278)
                      ....        ....+|+.++.+++++|++.++ ++|++||.+   +.+.                      .|.    
T Consensus        70 ~~~~--------~~~~vNv~Gt~nLleAA~~~Gv-RiV~~SS~~---G~~~----------------------~~~----  111 (699)
T PRK12320         70 VDTS--------APGGVGITGLAHVANAAARAGA-RLLFVSQAA---GRPE----------------------LYR----  111 (699)
T ss_pred             cCcc--------chhhHHHHHHHHHHHHHHHcCC-eEEEEECCC---CCCc----------------------ccc----
Confidence            6321        1235899999999999999997 799999742   2111                      122    


Q ss_pred             HHHHHHHHHHHhcCCceEEEecceeeCCCCCCC-CchhHHHHHHHhhCCCCcccccccCcccHHHHHHHHHhhhcCCCCC
Q 023689          170 LAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY-LNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAAS  248 (278)
Q Consensus       170 ~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~  248 (278)
                      .+|.++.    .++++++++|++++||+..... ...+..++.....+.++       .++|++|++++++.+++... .
T Consensus       112 ~aE~ll~----~~~~p~~ILR~~nVYGp~~~~~~~r~I~~~l~~~~~~~pI-------~vIyVdDvv~alv~al~~~~-~  179 (699)
T PRK12320        112 QAETLVS----TGWAPSLVIRIAPPVGRQLDWMVCRTVATLLRSKVSARPI-------RVLHLDDLVRFLVLALNTDR-N  179 (699)
T ss_pred             HHHHHHH----hcCCCEEEEeCceecCCCCcccHhHHHHHHHHHHHcCCce-------EEEEHHHHHHHHHHHHhCCC-C
Confidence            3566553    4579999999999999965432 22344445444444443       35899999999999987643 4


Q ss_pred             ceEE-ecCccccHHHHHHHHHHhCCC
Q 023689          249 GRYL-CTNGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       249 ~~~~-~~~~~~s~~e~~~~i~~~~~~  273 (278)
                      |+|+ ++++.+|+.|+++.+....|.
T Consensus       180 GiyNIG~~~~~Si~el~~~i~~~~p~  205 (699)
T PRK12320        180 GVVDLATPDTTNVVTAWRLLRSVDPH  205 (699)
T ss_pred             CEEEEeCCCeeEHHHHHHHHHHhCCC
Confidence            6775 567899999999999887553

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.95  E-value=9.2e-26  Score=183.61  Aligned_cols=229  Identities=21%  Similarity=0.247  Sum_probs=158.3

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCC-hhhHHHHh-cCccE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD-SGAVSRAV-EGCKG   83 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d-~~~~~~~~-~~~d~   83 (278)
                      +.++|+||||||||+||+.++++|++.|+ .|+++.|+++.......  . . .+++++++|++| .+.+.+.+ .++|+
T Consensus        14 ~~~~~~ilItGasG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~--~-~-~~~~~~~~Dl~d~~~~l~~~~~~~~d~   88 (251)
T PLN00141         14 NVKTKTVFVAGATGRTGKRIVEQLLAKGF-AVKAGVRDVDKAKTSLP--Q-D-PSLQIVRADVTEGSDKLVEAIGDDSDA   88 (251)
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhCCC-EEEEEecCHHHHHHhcc--c-C-CceEEEEeeCCCCHHHHHHHhhcCCCE
Confidence            34689999999999999999999999999 89999887654322211  1 1 168999999998 46777777 68999


Q ss_pred             EEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhc-cCc
Q 023689           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKS-RKK  162 (278)
Q Consensus        84 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~-~~~  162 (278)
                      |||+++....   . +....+++|..++.++++++++.++++||++||.+++.....   .+..      +.|... ...
T Consensus        89 vi~~~g~~~~---~-~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~---~~~~------~~~~~~~~~~  155 (251)
T PLN00141         89 VICATGFRRS---F-DPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMG---QILN------PAYIFLNLFG  155 (251)
T ss_pred             EEECCCCCcC---C-CCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCcc---cccC------cchhHHHHHH
Confidence            9999876321   1 123346789999999999999999999999999765322111   1111      111111 113


Q ss_pred             hhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHHHHHHHHHhhh
Q 023689          163 WYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLF  242 (278)
Q Consensus       163 ~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  242 (278)
                      .|..+|..+|++++    +++++++++||+.++++......  .      ...+     ......+|+.+|+|++++.++
T Consensus       156 ~~~~~k~~~e~~l~----~~gi~~~iirpg~~~~~~~~~~~--~------~~~~-----~~~~~~~i~~~dvA~~~~~~~  218 (251)
T PLN00141        156 LTLVAKLQAEKYIR----KSGINYTIVRPGGLTNDPPTGNI--V------MEPE-----DTLYEGSISRDQVAEVAVEAL  218 (251)
T ss_pred             HHHHHHHHHHHHHH----hcCCcEEEEECCCccCCCCCceE--E------ECCC-----CccccCcccHHHHHHHHHHHh
Confidence            35567888887664    56999999999999987532110  0      0000     001235799999999999999


Q ss_pred             cCCCCCc-eE-Eec---CccccHHHHHHHHHH
Q 023689          243 ESPAASG-RY-LCT---NGIYQFGDFAERVSK  269 (278)
Q Consensus       243 ~~~~~~~-~~-~~~---~~~~s~~e~~~~i~~  269 (278)
                      .++...+ ++ +++   +-..++.+++..+++
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (251)
T PLN00141        219 LCPESSYKVVEIVARADAPKRSYKDLFASIKQ  250 (251)
T ss_pred             cChhhcCcEEEEecCCCCCchhHHHHHHHhhc
Confidence            8876543 44 444   224799999988875

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.94  E-value=3.1e-26  Score=188.65  Aligned_cols=240  Identities=19%  Similarity=0.124  Sum_probs=160.3

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc---
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE---   79 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---   79 (278)
                      |+.+++|++|||||+|+||++++++|.++|+ .|++..|+.+..+... .+..... ++.++.+|++|++++.++++   
T Consensus         1 ~~~~~~k~vlVTGas~gIG~ala~~La~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~   78 (275)
T PRK05876          1 MDGFPGRGAVITGGASGIGLATGTEFARRGA-RVVLGDVDKPGLRQAVNHLRAEGF-DVHGVMCDVRHREEVTHLADEAF   78 (275)
T ss_pred             CCCcCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC-eEEEEeCCCCCHHHHHHHHHHHH
Confidence            4556789999999999999999999999999 7888887654433221 2211111 68889999999999888775   


Q ss_pred             ----CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHHH----hcC-CCEEEEecceeeeecCCCCCCccc
Q 023689           80 ----GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAK----RFG-VRRVVVTSSISAIVPNPGWKGKVF  146 (278)
Q Consensus        80 ----~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~-~~~~v~~Ss~~~~~~~~~~~~~~~  146 (278)
                          ++|+|||+||....    +...+.++..+++|+.++.++++++.    +++ .+++|++||..++.+.+..     
T Consensus        79 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~~-----  153 (275)
T PRK05876         79 RLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGL-----  153 (275)
T ss_pred             HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCCC-----
Confidence                47999999997543    22234567788999999999888874    343 4689999997776543332     


Q ss_pred             cCCCCCchhhhhccCchhhhHHHHHHHHHHHHHH---hcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCC-Cccc
Q 023689          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSK-DTQE  222 (278)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~-~~~~  222 (278)
                                     ..|+.+|...+.+.+.++.   .+|+++++++|+.+.++.........   ......... ...+
T Consensus       154 ---------------~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~~  215 (275)
T PRK05876        154 ---------------GAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIR---GAACAQSSTTGSPG  215 (275)
T ss_pred             ---------------chHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhc---Cccccccccccccc
Confidence                           5799999975555555543   35899999999999988643220000   000000000 1111


Q ss_pred             --ccccCcccHHHHHHHHHhhhcCCCCCceEEecCc--cccHHHHHHHHHHhC
Q 023689          223 --YHWLGAVPVKDVAKAQVLLFESPAASGRYLCTNG--IYQFGDFAERVSKLF  271 (278)
Q Consensus       223 --~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~--~~s~~e~~~~i~~~~  271 (278)
                        ...+++++++|+|++++.++.+..   .+++.+.  ..++.+..+.+...+
T Consensus       216 ~~~~~~~~~~~~dva~~~~~ai~~~~---~~~~~~~~~~~~~~~~~~~~~~~~  265 (275)
T PRK05876        216 PLPLQDDNLGVDDIAQLTADAILANR---LYVLPHAASRASIRRRFERIDRTF  265 (275)
T ss_pred             cccccccCCCHHHHHHHHHHHHHcCC---eEEecChhhHHHHHHHHHHHHHhc
Confidence              135678999999999999987642   3554422  223444444444444

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.94  E-value=6.4e-26  Score=184.56  Aligned_cols=223  Identities=24%  Similarity=0.224  Sum_probs=159.6

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      .+++|++|||||+|+||++++++|+++|+ .|+++.|+........ .+..... ++.++.+|+.|++++.++++     
T Consensus         3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (251)
T PRK12826          3 DLEGRVALVTGAARGIGRAIAVRLAADGA-EVIVVDICGDDAAATAELVEAAGG-KARARQVDVRDRAALKAAVAAGVED   80 (251)
T ss_pred             CCCCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC-eEEEEECCCCCHHHHHHHHHHHHHH
Confidence            34568999999999999999999999999 8999998754322221 1111112 68899999999999888875     


Q ss_pred             --CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeee-ecCCCCCCccccC
Q 023689           80 --GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAI-VPNPGWKGKVFDE  148 (278)
Q Consensus        80 --~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~-~~~~~~~~~~~~E  148 (278)
                        .+|+|||+++....    .....++...+++|+.++.++++++    ++.+.++||++||..+. .+.+.        
T Consensus        81 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~--------  152 (251)
T PRK12826         81 FGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYPG--------  152 (251)
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCCCC--------
Confidence              68999999987554    2223456778999999999999887    34567889999987654 22111        


Q ss_pred             CCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccc
Q 023689          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (278)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (278)
                                  ...|+.+|...+.+++.++.+   .+++++++||+.++|+........  ..........+      .
T Consensus       153 ------------~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~--~~~~~~~~~~~------~  212 (251)
T PRK12826        153 ------------LAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDA--QWAEAIAAAIP------L  212 (251)
T ss_pred             ------------ccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCch--HHHHHHHhcCC------C
Confidence                        156999999999998888754   489999999999999975433111  11122222222      2


Q ss_pred             cCcccHHHHHHHHHhhhcCCCC--Cc-eEEecCccc
Q 023689          226 LGAVPVKDVAKAQVLLFESPAA--SG-RYLCTNGIY  258 (278)
Q Consensus       226 ~~~i~~~D~a~~~~~~~~~~~~--~~-~~~~~~~~~  258 (278)
                      ..+++++|+|+++..++.....  .| .+.+.++..
T Consensus       213 ~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~  248 (251)
T PRK12826        213 GRLGEPEDIAAAVLFLASDEARYITGQTLPVDGGAT  248 (251)
T ss_pred             CCCcCHHHHHHHHHHHhCccccCcCCcEEEECCCcc
Confidence            3678999999999998865432  34 455555443

>PRK06182 short chain dehydrogenase; Validated

Probab=99.94  E-value=1e-25  Score=185.70  Aligned_cols=216  Identities=19%  Similarity=0.177  Sum_probs=154.5

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc-------C
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~   80 (278)
                      ++|+++||||+|+||++++++|+++|+ .|++..|+.+..+.+..      .+++++.+|++|++++.++++       +
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~------~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~   74 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLAS------LGVHPLSLDVTDEASIKAAVDTIIAEEGR   74 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHh------CCCeEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            358999999999999999999999999 89998887654333221      167899999999999988876       6


Q ss_pred             ccEEEEecccCCCC----CCCCchhhhhhhHHhHH----HHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCC
Q 023689           81 CKGVFHVASPCTLE----DPVDPEKELILPAVQGT----LNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (278)
Q Consensus        81 ~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~----~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~  152 (278)
                      +|+|||+||.....    ...++++..+++|+.++    ..+++.+++.+.+++|++||..+..+.+.            
T Consensus        75 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~------------  142 (273)
T PRK06182         75 IDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPL------------  142 (273)
T ss_pred             CCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCCC------------
Confidence            89999999875432    12346788899999884    55556667777789999999665333222            


Q ss_pred             chhhhhccCchhhhHHHHHHHHHHHHHH---hcCCceEEEecceeeCCCCCCCCch---------hHH----HHHHHhhC
Q 023689          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLNA---------SCA----VLQQLLQG  216 (278)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lrp~~i~g~~~~~~~~~---------~~~----~~~~~~~~  216 (278)
                              ...|+.+|.+.+.+.+.++.   .+|+++++++||.+.++........         ...    ....+...
T Consensus       143 --------~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (273)
T PRK06182        143 --------GAWYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRST  214 (273)
T ss_pred             --------ccHhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHh
Confidence                    14699999999988776663   4599999999999998853211000         000    01111111


Q ss_pred             CCCcccccccCcccHHHHHHHHHhhhcCCCCCceEEecCc
Q 023689          217 SKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGRYLCTNG  256 (278)
Q Consensus       217 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~  256 (278)
                      .      ....+.+++|+|++++.++........|+++..
T Consensus       215 ~------~~~~~~~~~~vA~~i~~~~~~~~~~~~~~~g~~  248 (273)
T PRK06182        215 Y------GSGRLSDPSVIADAISKAVTARRPKTRYAVGFG  248 (273)
T ss_pred             h------ccccCCCHHHHHHHHHHHHhCCCCCceeecCcc
Confidence            1      134578999999999999986554456766544

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.94  E-value=9.4e-26  Score=183.23  Aligned_cols=219  Identities=19%  Similarity=0.172  Sum_probs=156.1

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCC-ccccc-CCCCCCCceEEEEccCCChhhHHHHhc----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-SHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~-~~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~----   79 (278)
                      .+++|+||||||||+||++|+++|+++|+ .|++..|+.... +.... ..... .+++++.+|++|++++.++++    
T Consensus         3 ~~~~~~vlItGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~   80 (249)
T PRK12825          3 SLMGRVALVTGAARGLGRAIALRLARAGA-DVVVHYRSDEEAAEELVEAVEALG-RRAQAVQADVTDKAALEAAVAAAVE   80 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcC-CceEEEECCcCCHHHHHHHHHHHHH
Confidence            34568999999999999999999999999 777766654321 11111 11111 268899999999998888764    


Q ss_pred             ---CccEEEEecccCCCCC----CCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccC
Q 023689           80 ---GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (278)
Q Consensus        80 ---~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E  148 (278)
                         ++|+|||+||......    ....+...+++|+.++.++++.+    ++.+.+++|++||..++++....       
T Consensus        81 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~~~-------  153 (249)
T PRK12825         81 RFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGR-------  153 (249)
T ss_pred             HcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCCCc-------
Confidence               5799999999654322    23456788999999999998887    45678899999997776543321       


Q ss_pred             CCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccc
Q 023689          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (278)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (278)
                                   ..|+.+|...+.+++.++++   .+++++++||+.++|+......  ....... ....      ..
T Consensus       154 -------------~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~--~~~~~~~-~~~~------~~  211 (249)
T PRK12825        154 -------------SNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATI--EEAREAK-DAET------PL  211 (249)
T ss_pred             -------------hHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCcccccc--chhHHhh-hccC------CC
Confidence                         56999999999888877765   5999999999999999754431  1111111 0011      13


Q ss_pred             cCcccHHHHHHHHHhhhcCCC--CCc-eEEecC
Q 023689          226 LGAVPVKDVAKAQVLLFESPA--ASG-RYLCTN  255 (278)
Q Consensus       226 ~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~  255 (278)
                      ..+++++|+++++.+++.+..  ..| .|.+.+
T Consensus       212 ~~~~~~~dva~~~~~~~~~~~~~~~g~~~~i~~  244 (249)
T PRK12825        212 GRSGTPEDIARAVAFLCSDASDYITGQVIEVTG  244 (249)
T ss_pred             CCCcCHHHHHHHHHHHhCccccCcCCCEEEeCC
Confidence            448999999999999997653  235 454443

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.94  E-value=7.2e-26  Score=186.61  Aligned_cols=223  Identities=15%  Similarity=0.131  Sum_probs=155.6

Q ss_pred             cccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc----
Q 023689            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (278)
Q Consensus         5 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~----   79 (278)
                      ...++|++|||||+|+||++++++|+++|+ .|++..|+.+...... .+..... +++++.+|++|++++.++++    
T Consensus         6 ~~~~~~~vlVtGa~g~iG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~   83 (274)
T PRK07775          6 PHPDRRPALVAGASSGIGAATAIELAAAGF-PVALGARRVEKCEELVDKIRADGG-EAVAFPLDVTDPDSVKSFVAQAEE   83 (274)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC-eEEEEECCCCCHHHHHHHHHHHHH
Confidence            345678999999999999999999999999 8888887654322221 1111111 68889999999999888775    


Q ss_pred             ---CccEEEEecccCCCCC----CCCchhhhhhhHHhHHHHHHHHHH----hcCCCEEEEecceeeeecCCCCCCccccC
Q 023689           80 ---GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (278)
Q Consensus        80 ---~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E  148 (278)
                         .+|+|||+||......    ..+.+...+++|+.++.++++++.    +.+.++||++||..++.+.+.        
T Consensus        84 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~~--------  155 (274)
T PRK07775         84 ALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRPH--------  155 (274)
T ss_pred             hcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCC--------
Confidence               4799999998754321    223456778999999999988764    345678999999766543322        


Q ss_pred             CCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCC-CchhHHHHHHHhhCCCCccccc
Q 023689          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPY-LNASCAVLQQLLQGSKDTQEYH  224 (278)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  224 (278)
                                  ...|+.+|.+.|.+.+.++.+.   |++++++|||.+.++..... .......+.......    ...
T Consensus       156 ------------~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~~----~~~  219 (274)
T PRK07775        156 ------------MGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKWG----QAR  219 (274)
T ss_pred             ------------cchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHhc----ccc
Confidence                        1579999999999999888654   99999999998877643221 111111222211100    112


Q ss_pred             ccCcccHHHHHHHHHhhhcCCCCCceEEe
Q 023689          225 WLGAVPVKDVAKAQVLLFESPAASGRYLC  253 (278)
Q Consensus       225 ~~~~i~~~D~a~~~~~~~~~~~~~~~~~~  253 (278)
                      ...+++++|+|++++.+++++.....|++
T Consensus       220 ~~~~~~~~dva~a~~~~~~~~~~~~~~~~  248 (274)
T PRK07775        220 HDYFLRASDLARAITFVAETPRGAHVVNM  248 (274)
T ss_pred             cccccCHHHHHHHHHHHhcCCCCCCeeEE
Confidence            45689999999999999987644334543

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.94  E-value=9.7e-26  Score=184.29  Aligned_cols=222  Identities=22%  Similarity=0.247  Sum_probs=153.8

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc-------
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------   79 (278)
                      ++|++|||||||+||++++++|+++|+ .|+++.|+++...... .+..... +++++.+|++|++++.++++       
T Consensus         3 ~~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~   80 (258)
T PRK12429          3 KGKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAAAEALQKAGG-KAIGVAMDVTDEEAINAGIDYAVETFG   80 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            458999999999999999999999999 8999988765543322 1111112 78899999999999888776       


Q ss_pred             CccEEEEecccCCCCC----CCCchhhhhhhHHhHHH----HHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCC
Q 023689           80 GCKGVFHVASPCTLED----PVDPEKELILPAVQGTL----NVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (278)
Q Consensus        80 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~----~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~  151 (278)
                      ++|+|||+|+......    ..+.++..+++|+.++.    .+++++++.+.++||++||..++++.++.          
T Consensus        81 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~----------  150 (258)
T PRK12429         81 GVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAGK----------  150 (258)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCc----------
Confidence            5799999998655422    22345667888988844    45555566678899999997776554332          


Q ss_pred             CchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCch--------hHHHHHHHhhCCCCc
Q 023689          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNA--------SCAVLQQLLQGSKDT  220 (278)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~--------~~~~~~~~~~~~~~~  220 (278)
                                +.|+.+|.+.+.+.+.++.+   .+++++++||+.++|+........        ...........    
T Consensus       151 ----------~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  216 (258)
T PRK12429        151 ----------AAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLP----  216 (258)
T ss_pred             ----------chhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhc----
Confidence                      56888888888777766654   489999999999999864321000        00011111111    


Q ss_pred             ccccccCcccHHHHHHHHHhhhcCCCC--Cce-EEecCc
Q 023689          221 QEYHWLGAVPVKDVAKAQVLLFESPAA--SGR-YLCTNG  256 (278)
Q Consensus       221 ~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~~-~~~~~~  256 (278)
                       ....+++++++|+|+++..++.....  .|. |+++++
T Consensus       217 -~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g  254 (258)
T PRK12429        217 -LVPQKRFTTVEEIADYALFLASFAAKGVTGQAWVVDGG  254 (258)
T ss_pred             -cCCccccCCHHHHHHHHHHHcCccccCccCCeEEeCCC
Confidence             11246799999999999999876433  354 455443

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.94  E-value=1.5e-25  Score=181.85  Aligned_cols=218  Identities=22%  Similarity=0.222  Sum_probs=160.9

Q ss_pred             CccccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc-
Q 023689            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-   79 (278)
Q Consensus         1 m~~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-   79 (278)
                      |+.|..+++|+++||||+|+||+++++.|.++|+ .|+++.|+.+....+....     ++.++.+|++|.+++.++++ 
T Consensus         1 ~~~~~~~~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~   74 (245)
T PRK07060          1 MNMAFDFSGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGET-----GCEPLRLDVGDDAAIRAALAA   74 (245)
T ss_pred             CCcccccCCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh-----CCeEEEecCCCHHHHHHHHHH
Confidence            7777778889999999999999999999999999 8999988765433322110     46688999999998888876 


Q ss_pred             --CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHhc----C-CCEEEEecceeeeecCCCCCCccccC
Q 023689           80 --GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF----G-VRRVVVTSSISAIVPNPGWKGKVFDE  148 (278)
Q Consensus        80 --~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~----~-~~~~v~~Ss~~~~~~~~~~~~~~~~E  148 (278)
                        ++|+|||+|+.....    ...++++..+.+|+.++.++++++.+.    + .++||++||..++++.+..       
T Consensus        75 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-------  147 (245)
T PRK07060         75 AGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDH-------  147 (245)
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCCC-------
Confidence              489999999875432    123456777889999999999888543    2 3689999997776554332       


Q ss_pred             CCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccc
Q 023689          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (278)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (278)
                                   ..|+.+|.+.+.+++.++.+   .+++++.+||+.++++........ ...........      ..
T Consensus       148 -------------~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~-~~~~~~~~~~~------~~  207 (245)
T PRK07060        148 -------------LAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSD-PQKSGPMLAAI------PL  207 (245)
T ss_pred             -------------cHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccC-HHHHHHHHhcC------CC
Confidence                         57999999999999988865   489999999999999864321111 11111122211      14


Q ss_pred             cCcccHHHHHHHHHhhhcCCCC--CceE
Q 023689          226 LGAVPVKDVAKAQVLLFESPAA--SGRY  251 (278)
Q Consensus       226 ~~~i~~~D~a~~~~~~~~~~~~--~~~~  251 (278)
                      ..+++++|+|+++..++..+..  .|.+
T Consensus       208 ~~~~~~~d~a~~~~~l~~~~~~~~~G~~  235 (245)
T PRK07060        208 GRFAEVDDVAAPILFLLSDAASMVSGVS  235 (245)
T ss_pred             CCCCCHHHHHHHHHHHcCcccCCccCcE
Confidence            5689999999999999976542  3544

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.94  E-value=1.6e-25  Score=182.79  Aligned_cols=213  Identities=20%  Similarity=0.178  Sum_probs=154.9

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc---
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE---   79 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---   79 (278)
                      |.++++|++|||||+|+||++++++|+++|+ .|++..|+.+..+... .+...+ .++.++++|++|+++++++++   
T Consensus         5 ~~~~~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~-~~~~~~~~D~~~~~~~~~~~~~~~   82 (255)
T PRK07523          5 LFDLTGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPAKLAAAAESLKGQG-LSAHALAFDVTDHDAVRAAIDAFE   82 (255)
T ss_pred             ccCCCCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcC-ceEEEEEccCCCHHHHHHHHHHHH
Confidence            3356789999999999999999999999999 8888888764432221 121111 268899999999999888876   


Q ss_pred             ----CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHh----cCCCEEEEecceeeeecCCCCCCcccc
Q 023689           80 ----GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFD  147 (278)
Q Consensus        80 ----~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~  147 (278)
                          .+|+|||+||.....    ...+.++..+++|+.++.++++++.+    .+.+++|++||..+..+.+.       
T Consensus        83 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~-------  155 (255)
T PRK07523         83 AEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARPG-------  155 (255)
T ss_pred             HhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCCC-------
Confidence                479999999875432    22345577888999999999998864    35678999998655433222       


Q ss_pred             CCCCCchhhhhccCchhhhHHHHHHHHHHHHHH---hcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccc
Q 023689          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (278)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (278)
                                   ...|+.+|...+.+.+.++.   ++|++++++||+.+.++....... .......+....+      
T Consensus       156 -------------~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~-~~~~~~~~~~~~~------  215 (255)
T PRK07523        156 -------------IAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVA-DPEFSAWLEKRTP------  215 (255)
T ss_pred             -------------CccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhcc-CHHHHHHHHhcCC------
Confidence                         25799999999999888876   459999999999999986432211 1111122222222      


Q ss_pred             ccCcccHHHHHHHHHhhhcCC
Q 023689          225 WLGAVPVKDVAKAQVLLFESP  245 (278)
Q Consensus       225 ~~~~i~~~D~a~~~~~~~~~~  245 (278)
                      ...+.+++|+|+++++++...
T Consensus       216 ~~~~~~~~dva~~~~~l~~~~  236 (255)
T PRK07523        216 AGRWGKVEELVGACVFLASDA  236 (255)
T ss_pred             CCCCcCHHHHHHHHHHHcCch
Confidence            345778999999999998753

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.94  E-value=6e-26  Score=187.79  Aligned_cols=227  Identities=20%  Similarity=0.160  Sum_probs=159.2

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccC-CC-CCCCceEEEEccCCChhhHHHHhc-------
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL-PG-AGDANLRVFEADVLDSGAVSRAVE-------   79 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~-~~-~~~~~v~~~~~Dl~d~~~~~~~~~-------   79 (278)
                      +|++|||||+|+||+++++.|+++|+ .|++..|+++..+..... .. ....+++++.+|++|++++.+ ++       
T Consensus         3 ~k~~lItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~   80 (280)
T PRK06914          3 KKIAIVTGASSGFGLLTTLELAKKGY-LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIG   80 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcC
Confidence            47899999999999999999999999 898888876544333211 10 011278999999999988776 43       


Q ss_pred             CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccCCCC
Q 023689           80 GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (278)
Q Consensus        80 ~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~  151 (278)
                      ++|+|||+||.....    ...+.++..+++|+.++.++++++    ++.+.++||++||..+.++.+..          
T Consensus        81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~----------  150 (280)
T PRK06914         81 RIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPGL----------  150 (280)
T ss_pred             CeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCCC----------
Confidence            479999999865432    122455677889999988888875    55667899999997776554332          


Q ss_pred             CchhhhhccCchhhhHHHHHHHHHHHHH---HhcCCceEEEecceeeCCCCCCCCc----------hhHHHHHHHhhCCC
Q 023689          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFA---EKHGVDVVAIHPATCLGPLMQPYLN----------ASCAVLQQLLQGSK  218 (278)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~---~~~~~~~~~lrp~~i~g~~~~~~~~----------~~~~~~~~~~~~~~  218 (278)
                                ..|+.+|...+.+++.++   .++|++++++|||.++++.......          .....+....... 
T Consensus       151 ----------~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  219 (280)
T PRK06914        151 ----------SPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHI-  219 (280)
T ss_pred             ----------chhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHH-
Confidence                      579999999999888876   3569999999999999985332100          0011111111100 


Q ss_pred             CcccccccCcccHHHHHHHHHhhhcCCCCCceEEec-CccccHH
Q 023689          219 DTQEYHWLGAVPVKDVAKAQVLLFESPAASGRYLCT-NGIYQFG  261 (278)
Q Consensus       219 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~  261 (278)
                         ......+++++|+|++++.++.++.....|+++ +..+++.
T Consensus       220 ---~~~~~~~~~~~dva~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (280)
T PRK06914        220 ---NSGSDTFGNPIDVANLIVEIAESKRPKLRYPIGKGVKLMIL  260 (280)
T ss_pred             ---hhhhhccCCHHHHHHHHHHHHcCCCCCcccccCCchHHHHH
Confidence               112356789999999999999987665556654 4444443

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.94  E-value=2e-25  Score=182.39  Aligned_cols=223  Identities=17%  Similarity=0.133  Sum_probs=159.9

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc----
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~----   79 (278)
                      |+.+++|++|||||+|+||+++++.|+++|+ .|++..|+.+..+.+....  . .++.++.+|++|++++.++++    
T Consensus         1 ~~~l~~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~--~-~~~~~~~~D~~~~~~~~~~~~~~~~   76 (257)
T PRK07067          1 MMRLQGKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPARARLAALEI--G-PAAIAVSLDVTRQDSIDRIVAAAVE   76 (257)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHh--C-CceEEEEccCCCHHHHHHHHHHHHH
Confidence            4457778999999999999999999999999 8888888765443332211  1 168899999999999888776    


Q ss_pred             ---CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHhc----C-CCEEEEecceeeeecCCCCCCcccc
Q 023689           80 ---GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF----G-VRRVVVTSSISAIVPNPGWKGKVFD  147 (278)
Q Consensus        80 ---~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~----~-~~~~v~~Ss~~~~~~~~~~~~~~~~  147 (278)
                         .+|++||+|+.....    ...++++..+++|+.++.++++++...    + .+++|++||..+.++.+.       
T Consensus        77 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-------  149 (257)
T PRK07067         77 RFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEAL-------  149 (257)
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCCC-------
Confidence               579999999865431    223467888999999999999988543    1 257999999766544322       


Q ss_pred             CCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchh-------H-HHHHHHhhC
Q 023689          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNAS-------C-AVLQQLLQG  216 (278)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~-------~-~~~~~~~~~  216 (278)
                                   ...|+.+|...+.+.+.++.+   +|+++++++||.++|+.........       . ........+
T Consensus       150 -------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (257)
T PRK07067        150 -------------VSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEA  216 (257)
T ss_pred             -------------CchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhc
Confidence                         257999999999998888763   6999999999999998643211000       0 000111111


Q ss_pred             CCCcccccccCcccHHHHHHHHHhhhcCCCC--Cc-eEEecCc
Q 023689          217 SKDTQEYHWLGAVPVKDVAKAQVLLFESPAA--SG-RYLCTNG  256 (278)
Q Consensus       217 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~-~~~~~~~  256 (278)
                            .....+++++|+|+++.+++.....  .| .+++.++
T Consensus       217 ------~~~~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg  253 (257)
T PRK07067        217 ------VPLGRMGVPDDLTGMALFLASADADYIVAQTYNVDGG  253 (257)
T ss_pred             ------CCCCCccCHHHHHHHHHHHhCcccccccCcEEeecCC
Confidence                  1356789999999999999876432  34 4555543

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.94  E-value=2.3e-25  Score=181.73  Aligned_cols=223  Identities=17%  Similarity=0.160  Sum_probs=154.3

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEE-ecCCCCCccc-ccCCCCCCCceEEEEccCCChhhHHHHhc--
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINAT-VFPGSDSSHL-FALPGAGDANLRVFEADVLDSGAVSRAVE--   79 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~-~r~~~~~~~~-~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--   79 (278)
                      |+++++|+++||||+|+||++++++|+++|+ .|++. .|+.+..+.. ..+.... ..++++.+|++|++++.++++  
T Consensus         1 ~~~~~~~~ilItGasg~iG~~la~~l~~~G~-~v~i~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~d~~~i~~~~~~~   78 (254)
T PRK12746          1 MKNLDGKVALVTGASRGIGRAIAMRLANDGA-LVAIHYGRNKQAADETIREIESNG-GKAFLIEADLNSIDGVKKLVEQL   78 (254)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcC-CcEEEEEcCcCCHHHHHHHHHHH
Confidence            4555678999999999999999999999999 67664 4544322111 1111111 268899999999999887765  


Q ss_pred             -----------CccEEEEecccCCCCC----CCCchhhhhhhHHhHHHHHHHHHHhc--CCCEEEEecceeeeecCCCCC
Q 023689           80 -----------GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWK  142 (278)
Q Consensus        80 -----------~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~Ss~~~~~~~~~~~  142 (278)
                                 ++|++||+||......    ..+.+...+++|+.++.++++++.+.  ..+++|++||..++.+.++. 
T Consensus        79 ~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~~~~-  157 (254)
T PRK12746         79 KNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGFTGS-  157 (254)
T ss_pred             HHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCCCCC-
Confidence                       4899999998754322    22344677889999999999988653  34689999987665443321 


Q ss_pred             CccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCC
Q 023689          143 GKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKD  219 (278)
Q Consensus       143 ~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~  219 (278)
                                         ..|+.+|.+.+.+.+.++++   +++++++++||.++++........ .. +........ 
T Consensus       158 -------------------~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~-~~-~~~~~~~~~-  215 (254)
T PRK12746        158 -------------------IAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDD-PE-IRNFATNSS-  215 (254)
T ss_pred             -------------------cchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccC-hh-HHHHHHhcC-
Confidence                               57999999999988888764   589999999999998864322110 11 111111111 


Q ss_pred             cccccccCcccHHHHHHHHHhhhcCCCC--Cc-eEEecC
Q 023689          220 TQEYHWLGAVPVKDVAKAQVLLFESPAA--SG-RYLCTN  255 (278)
Q Consensus       220 ~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~-~~~~~~  255 (278)
                          ....+++++|+|+++..++.+...  .| .|++.+
T Consensus       216 ----~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~i~~  250 (254)
T PRK12746        216 ----VFGRIGQVEDIADAVAFLASSDSRWVTGQIIDVSG  250 (254)
T ss_pred             ----CcCCCCCHHHHHHHHHHHcCcccCCcCCCEEEeCC
Confidence                134577999999999988876432  24 555543

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.94  E-value=1.1e-24  Score=215.26  Aligned_cols=256  Identities=22%  Similarity=0.199  Sum_probs=178.5

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCC----CCeEEEEecCCCCCcccccCC----------CCCCCceEEEEccCCCh---
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNN----YTSINATVFPGSDSSHLFALP----------GAGDANLRVFEADVLDS---   71 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g----~~~v~~~~r~~~~~~~~~~~~----------~~~~~~v~~~~~Dl~d~---   71 (278)
                      .++|||||||||+|++++++|++++    + .|+++.|..........+.          .....+++++.+|++++   
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~-~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNF-KVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCc-EEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence            5799999999999999999999887    5 8999999754432221110          00112789999999754   


Q ss_pred             ---hhHHHHhcCccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCC-------
Q 023689           72 ---GAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGW-------  141 (278)
Q Consensus        72 ---~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~-------  141 (278)
                         +.+.++..++|+|||+|+....   ...+......|+.|+.+++++|++.++++|+|+||.+++......       
T Consensus      1050 l~~~~~~~l~~~~d~iiH~Aa~~~~---~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~~~~~ 1126 (1389)
T TIGR03443      1050 LSDEKWSDLTNEVDVIIHNGALVHW---VYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLSDELV 1126 (1389)
T ss_pred             cCHHHHHHHHhcCCEEEECCcEecC---ccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchhhhhh
Confidence               5667777899999999997653   234555667899999999999998888999999997765321110       


Q ss_pred             --CCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCC---chhHHHHHHHhhC
Q 023689          142 --KGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL---NASCAVLQQLLQG  216 (278)
Q Consensus       142 --~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~---~~~~~~~~~~~~~  216 (278)
                        ....+.|+.+..+. .....+.|+.||+.+|.++..+++ .|++++++||+.|||+......   ..+..++.....-
T Consensus      1127 ~~~~~~~~e~~~~~~~-~~~~~~~Y~~sK~~aE~l~~~~~~-~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~ 1204 (1389)
T TIGR03443      1127 QAGGAGIPESDDLMGS-SKGLGTGYGQSKWVAEYIIREAGK-RGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCIQL 1204 (1389)
T ss_pred             hccCCCCCcccccccc-cccCCCChHHHHHHHHHHHHHHHh-CCCCEEEECCCccccCCCcCCCCchhHHHHHHHHHHHh
Confidence              01123444332221 112235799999999999988765 5999999999999999654431   2233333322221


Q ss_pred             CCCcccccccCcccHHHHHHHHHhhhcCCCC--C-ceEEec-CccccHHHHHHHHHHh
Q 023689          217 SKDTQEYHWLGAVPVKDVAKAQVLLFESPAA--S-GRYLCT-NGIYQFGDFAERVSKL  270 (278)
Q Consensus       217 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~-~~~~~~-~~~~s~~e~~~~i~~~  270 (278)
                      .........+++++++|+|++++.++.++..  . .+|+++ +..+++.++++.+.+.
T Consensus      1205 ~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~ 1262 (1389)
T TIGR03443      1205 GLIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPRIRFNDFLGTLKTY 1262 (1389)
T ss_pred             CCcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCCCcHHHHHHHHHHh
Confidence            1111223578999999999999999876542  2 257554 5588999999999764

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PRK09135 pteridine reductase; Provisional

Probab=99.94  E-value=5.1e-25  Score=179.05  Aligned_cols=222  Identities=19%  Similarity=0.179  Sum_probs=151.4

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCC-Ccccc-cCCCCCCCceEEEEccCCChhhHHHHhc----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~-~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~----   79 (278)
                      ..+++++|||||+||||++++++|+++|+ .|+++.|+... .+.+. .+.......+.++.+|++|.+++.++++    
T Consensus         3 ~~~~~~vlItGa~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   81 (249)
T PRK09135          3 TDSAKVALITGGARRIGAAIARTLHAAGY-RVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVA   81 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            34568999999999999999999999999 88888876432 11111 1111111268899999999999888876    


Q ss_pred             ---CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHhc---CCCEEEEecceeeeecCCCCCCccccCC
Q 023689           80 ---GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKVFDET  149 (278)
Q Consensus        80 ---~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~v~~Ss~~~~~~~~~~~~~~~~E~  149 (278)
                         ++|+|||+||.....    ...++++..+++|+.++.++++++.+.   ..+.++++++..+..+            
T Consensus        82 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------------  149 (249)
T PRK09135         82 AFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHAERP------------  149 (249)
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhhcCC------------
Confidence               479999999864431    122356788999999999999998642   2245666654322111            


Q ss_pred             CCCchhhhhccCchhhhHHHHHHHHHHHHHHhc--CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccC
Q 023689          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (278)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (278)
                        .      .+...|+.+|...|.+++.++++.  +++++++||+.++|+......  ..........+.+.      ..
T Consensus       150 --~------~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~--~~~~~~~~~~~~~~------~~  213 (249)
T PRK09135        150 --L------KGYPVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNSF--DEEARQAILARTPL------KR  213 (249)
T ss_pred             --C------CCchhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccccC--CHHHHHHHHhcCCc------CC
Confidence              1      112579999999999999998765  699999999999999864321  22222333333321      22


Q ss_pred             cccHHHHHHHHHhhhcCCC-CCc-eEEecCc
Q 023689          228 AVPVKDVAKAQVLLFESPA-ASG-RYLCTNG  256 (278)
Q Consensus       228 ~i~~~D~a~~~~~~~~~~~-~~~-~~~~~~~  256 (278)
                      +.+++|+|+++..++.... ..| .|+++++
T Consensus       214 ~~~~~d~a~~~~~~~~~~~~~~g~~~~i~~g  244 (249)
T PRK09135        214 IGTPEDIAEAVRFLLADASFITGQILAVDGG  244 (249)
T ss_pred             CcCHHHHHHHHHHHcCccccccCcEEEECCC
Confidence            3468999999966665432 234 5766543

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.94  E-value=3.1e-25  Score=180.16  Aligned_cols=222  Identities=18%  Similarity=0.127  Sum_probs=156.6

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEec-CCCCCccc-ccCCCCCCCceEEEEccCCChhhHHHHhcC-
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVF-PGSDSSHL-FALPGAGDANLRVFEADVLDSGAVSRAVEG-   80 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r-~~~~~~~~-~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~-   80 (278)
                      |..+++|++|||||+|+||++++++|+++|+ .|++..+ +++..+.. ..+.... .++.++.+|++|++++.++++. 
T Consensus         1 ~~~~~~~~~lItG~s~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~~   78 (247)
T PRK12935          1 MVQLNGKVAIVTGGAKGIGKAITVALAQEGA-KVVINYNSSKEAAENLVNELGKEG-HDVYAVQADVSKVEDANRLVEEA   78 (247)
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEcCCcHHHHHHHHHHHHhcC-CeEEEEECCCCCHHHHHHHHHHH
Confidence            3445678999999999999999999999999 6766544 32222211 1111111 2688999999999998888764 


Q ss_pred             ------ccEEEEecccCCCCC----CCCchhhhhhhHHhHHHHHHHHHHh----cCCCEEEEecceeeeecCCCCCCccc
Q 023689           81 ------CKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVF  146 (278)
Q Consensus        81 ------~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~  146 (278)
                            +|+|||+|+......    ..+.+++.+++|+.++..+++++..    .+.+++|++||..+..+.+.      
T Consensus        79 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~------  152 (247)
T PRK12935         79 VNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFG------  152 (247)
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCCC------
Confidence                  799999998754321    2256688899999999999998854    34568999999766544322      


Q ss_pred             cCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccc
Q 023689          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (278)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (278)
                                    ...|+.+|.+.+.+.+.++.+   .++++++++||.+.++.....   ..........+.      
T Consensus       153 --------------~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~---~~~~~~~~~~~~------  209 (247)
T PRK12935        153 --------------QTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEV---PEEVRQKIVAKI------  209 (247)
T ss_pred             --------------CcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhc---cHHHHHHHHHhC------
Confidence                          257999999998888777765   399999999999987753321   112222222222      


Q ss_pred             cccCcccHHHHHHHHHhhhcCCC-CCc-eEEecCc
Q 023689          224 HWLGAVPVKDVAKAQVLLFESPA-ASG-RYLCTNG  256 (278)
Q Consensus       224 ~~~~~i~~~D~a~~~~~~~~~~~-~~~-~~~~~~~  256 (278)
                      ..+.+.+++|++++++++++... ..| .|++.++
T Consensus       210 ~~~~~~~~edva~~~~~~~~~~~~~~g~~~~i~~g  244 (247)
T PRK12935        210 PKKRFGQADEIAKGVVYLCRDGAYITGQQLNINGG  244 (247)
T ss_pred             CCCCCcCHHHHHHHHHHHcCcccCccCCEEEeCCC
Confidence            24568999999999999886542 234 5655544

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=99.94  E-value=1.4e-25  Score=175.27  Aligned_cols=229  Identities=19%  Similarity=0.172  Sum_probs=175.2

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCC-CCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS-DSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~-~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      ..|-.+-|.|||||+|+.++.+|.+.|. .|++--|.++ ....++.....+  .+.+...|+.|+++++++++...+||
T Consensus        59 ~sGiVaTVFGAtGFlGryvvnklak~GS-QviiPyR~d~~~~r~lkvmGdLG--Qvl~~~fd~~DedSIr~vvk~sNVVI  135 (391)
T KOG2865|consen   59 VSGIVATVFGATGFLGRYVVNKLAKMGS-QVIIPYRGDEYDPRHLKVMGDLG--QVLFMKFDLRDEDSIRAVVKHSNVVI  135 (391)
T ss_pred             ccceEEEEecccccccHHHHHHHhhcCC-eEEEeccCCccchhheeeccccc--ceeeeccCCCCHHHHHHHHHhCcEEE
Confidence            4466789999999999999999999998 7877777443 344444433333  79999999999999999999999999


Q ss_pred             EecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhh
Q 023689           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYP  165 (278)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~  165 (278)
                      |+.|--.    +.....+.++|+.+.+.+.+.|++.|+.+||++|+..+-   -.            .       .+-|-
T Consensus       136 NLIGrd~----eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lgan---v~------------s-------~Sr~L  189 (391)
T KOG2865|consen  136 NLIGRDY----ETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGAN---VK------------S-------PSRML  189 (391)
T ss_pred             Eeecccc----ccCCcccccccchHHHHHHHHHHhhChhheeehhhcccc---cc------------C-------hHHHH
Confidence            9987532    223357789999999999999999999999999985531   11            0       14689


Q ss_pred             hHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcc-c-ccccCcccHHHHHHHHHhhhc
Q 023689          166 VSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ-E-YHWLGAVPVKDVAKAQVLLFE  243 (278)
Q Consensus       166 ~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~i~~~D~a~~~~~~~~  243 (278)
                      .+|.++|+.++.    .-.+.+|+||+.|||..++..... ..+.++ ..-.|+.. + +....++++-|+|.+++.+++
T Consensus       190 rsK~~gE~aVrd----afPeAtIirPa~iyG~eDrfln~y-a~~~rk-~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvk  263 (391)
T KOG2865|consen  190 RSKAAGEEAVRD----AFPEATIIRPADIYGTEDRFLNYY-ASFWRK-FGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVK  263 (391)
T ss_pred             HhhhhhHHHHHh----hCCcceeechhhhcccchhHHHHH-HHHHHh-cCceeeecCCcceeeccEEEehHHHHHHHhcc
Confidence            999999999973    357899999999999986543111 111222 11122222 2 167889999999999999999


Q ss_pred             CCCCCc-eE-EecCccccHHHHHHHHHHh
Q 023689          244 SPAASG-RY-LCTNGIYQFGDFAERVSKL  270 (278)
Q Consensus       244 ~~~~~~-~~-~~~~~~~s~~e~~~~i~~~  270 (278)
                      .+.+.| .| .+++..+.+.|+++.+-+.
T Consensus       264 Dp~s~Gktye~vGP~~yql~eLvd~my~~  292 (391)
T KOG2865|consen  264 DPDSMGKTYEFVGPDRYQLSELVDIMYDM  292 (391)
T ss_pred             CccccCceeeecCCchhhHHHHHHHHHHH
Confidence            998777 68 7788899999999877664

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.94  E-value=5.4e-25  Score=202.15  Aligned_cols=219  Identities=14%  Similarity=0.156  Sum_probs=156.6

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc--CccEEEE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFH   86 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vi~   86 (278)
                      .|+||||||+||||++|++.|.++|+ +|.                        +..+|++|.+.+...++  ++|+|||
T Consensus       380 ~mkiLVtGa~G~iG~~l~~~L~~~g~-~v~------------------------~~~~~l~d~~~v~~~i~~~~pd~Vih  434 (668)
T PLN02260        380 SLKFLIYGRTGWIGGLLGKLCEKQGI-AYE------------------------YGKGRLEDRSSLLADIRNVKPTHVFN  434 (668)
T ss_pred             CceEEEECCCchHHHHHHHHHHhCCC-eEE------------------------eeccccccHHHHHHHHHhhCCCEEEE
Confidence            47899999999999999999999998 552                        11156788888888876  6899999


Q ss_pred             ecccCCC---CCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCC---CCCCccccCCCCCchhhhhcc
Q 023689           87 VASPCTL---EDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNP---GWKGKVFDETSWTDLEYCKSR  160 (278)
Q Consensus        87 ~a~~~~~---~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~---~~~~~~~~E~~~~~~~~~~~~  160 (278)
                      +|+....   +.+..++..++++|+.++.+|+++|++.+++ +|++||.+.+.+..   .....+++|++.+.+.     
T Consensus       435 ~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~~-~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~-----  508 (668)
T PLN02260        435 AAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGLL-MMNFATGCIFEYDAKHPEGSGIGFKEEDKPNFT-----  508 (668)
T ss_pred             CCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCCe-EEEEcccceecCCcccccccCCCCCcCCCCCCC-----
Confidence            9997642   2345567899999999999999999999985 67778755543221   1112467777654332     


Q ss_pred             CchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCC-CcccccccCcccHHHHHHHHH
Q 023689          161 KKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSK-DTQEYHWLGAVPVKDVAKAQV  239 (278)
Q Consensus       161 ~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~D~a~~~~  239 (278)
                      .+.|+.||.++|.++..+.     +..++|+..+|+.......    .++..++.... +.++   .+..+++|++.+++
T Consensus       509 ~~~Yg~sK~~~E~~~~~~~-----~~~~~r~~~~~~~~~~~~~----nfv~~~~~~~~~~~vp---~~~~~~~~~~~~~~  576 (668)
T PLN02260        509 GSFYSKTKAMVEELLREYD-----NVCTLRVRMPISSDLSNPR----NFITKISRYNKVVNIP---NSMTVLDELLPISI  576 (668)
T ss_pred             CChhhHHHHHHHHHHHhhh-----hheEEEEEEecccCCCCcc----HHHHHHhccceeeccC---CCceehhhHHHHHH
Confidence            2689999999999997553     4677788888865422211    23333333322 2223   35677888998888


Q ss_pred             hhhcCCCCCceEEec-CccccHHHHHHHHHHhC
Q 023689          240 LLFESPAASGRYLCT-NGIYQFGDFAERVSKLF  271 (278)
Q Consensus       240 ~~~~~~~~~~~~~~~-~~~~s~~e~~~~i~~~~  271 (278)
                      .+++. ..+|+|+++ ++.+|++|+++.|.+.+
T Consensus       577 ~l~~~-~~~giyni~~~~~~s~~e~a~~i~~~~  608 (668)
T PLN02260        577 EMAKR-NLRGIWNFTNPGVVSHNEILEMYKDYI  608 (668)
T ss_pred             HHHHh-CCCceEEecCCCcCcHHHHHHHHHHhc
Confidence            88764 335788655 56799999999998876

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.93  E-value=5.8e-25  Score=179.09  Aligned_cols=218  Identities=20%  Similarity=0.155  Sum_probs=155.6

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      .+++|++|||||+|+||++++++|+++|+ +|+++.|+.+...... .+. . ..++.++++|++|+++++++++     
T Consensus         2 ~~~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~-~-~~~~~~~~~D~~~~~~~~~~~~~i~~~   78 (252)
T PRK06138          2 RLAGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERVAAAIA-A-GGRAFARQGDVGSAEAVEALVDFVAAR   78 (252)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHHHHHHh-c-CCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            35678999999999999999999999999 8888888765432221 111 1 1268899999999999888765     


Q ss_pred             --CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccCC
Q 023689           80 --GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (278)
Q Consensus        80 --~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~  149 (278)
                        ++|+|||+|+.....    ...+.++..+++|+.++.++.+++    ++++.++||++||..+.++.+..        
T Consensus        79 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~--------  150 (252)
T PRK06138         79 WGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRGR--------  150 (252)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCCc--------
Confidence              689999999975431    223445677999999987666654    55677899999998776654332        


Q ss_pred             CCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCch--hHHHHHHHhhCCCCccccc
Q 023689          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNA--SCAVLQQLLQGSKDTQEYH  224 (278)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~  224 (278)
                                  ..|+.+|.+.+.+.+.++.+.   |++++++|||.++++........  ..............     
T Consensus       151 ------------~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~-----  213 (252)
T PRK06138        151 ------------AAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHP-----  213 (252)
T ss_pred             ------------cHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhcCC-----
Confidence                        579999999999998887654   89999999999998864322110  01111111111111     


Q ss_pred             ccCcccHHHHHHHHHhhhcCCCC--CceE
Q 023689          225 WLGAVPVKDVAKAQVLLFESPAA--SGRY  251 (278)
Q Consensus       225 ~~~~i~~~D~a~~~~~~~~~~~~--~~~~  251 (278)
                      ...+++++|+|++++.++.++..  .|.+
T Consensus       214 ~~~~~~~~d~a~~~~~l~~~~~~~~~g~~  242 (252)
T PRK06138        214 MNRFGTAEEVAQAALFLASDESSFATGTT  242 (252)
T ss_pred             CCCCcCHHHHHHHHHHHcCchhcCccCCE
Confidence            23478999999999999887543  3544

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.93  E-value=6.7e-25  Score=180.57  Aligned_cols=216  Identities=20%  Similarity=0.185  Sum_probs=154.5

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcC-------c
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG-------C   81 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~-------~   81 (278)
                      +++++||||+|+||++++++|.++|+ .|++..|+.+.....        .+++++++|++|++++.++++.       +
T Consensus         4 ~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~--------~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~   74 (270)
T PRK06179          4 SKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAAPI--------PGVELLELDVTDDASVQAAVDEVIARAGRI   74 (270)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhcccc--------CCCeeEEeecCCHHHHHHHHHHHHHhCCCC
Confidence            47899999999999999999999999 899999876543221        1788999999999999888763       6


Q ss_pred             cEEEEecccCCCCC----CCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccCCCCCc
Q 023689           82 KGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (278)
Q Consensus        82 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~  153 (278)
                      |+|||+||......    ..++++..+++|+.++.++++++    ++.+.++||++||..++.+.+..            
T Consensus        75 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~------------  142 (270)
T PRK06179         75 DVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPYM------------  142 (270)
T ss_pred             CEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCCCc------------
Confidence            99999999755421    23456888999999988888874    56678899999997765443321            


Q ss_pred             hhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCc---hhHHHHHHHhhCCCCcccccccC
Q 023689          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN---ASCAVLQQLLQGSKDTQEYHWLG  227 (278)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~  227 (278)
                              ..|+.+|...+.+.+.++.+   +|+++++++||.+.++.......   ..... .................
T Consensus       143 --------~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  213 (270)
T PRK06179        143 --------ALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEY-DRERAVVSKAVAKAVKK  213 (270)
T ss_pred             --------cHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhh-HHHHHHHHHHHHhcccc
Confidence                    57999999999888887654   59999999999999886433210   00000 00000000000001233


Q ss_pred             cccHHHHHHHHHhhhcCCCCCceEEec
Q 023689          228 AVPVKDVAKAQVLLFESPAASGRYLCT  254 (278)
Q Consensus       228 ~i~~~D~a~~~~~~~~~~~~~~~~~~~  254 (278)
                      ...++|+|+.++.++..+...-.|..+
T Consensus       214 ~~~~~~va~~~~~~~~~~~~~~~~~~~  240 (270)
T PRK06179        214 ADAPEVVADTVVKAALGPWPKMRYTAG  240 (270)
T ss_pred             CCCHHHHHHHHHHHHcCCCCCeeEecC
Confidence            568899999999998876544456554

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.93  E-value=4.7e-25  Score=179.93  Aligned_cols=221  Identities=19%  Similarity=0.223  Sum_probs=152.8

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHh-------cCc
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAV-------EGC   81 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~-------~~~   81 (278)
                      ||++|||||+|+||++++++|+++|+ .|+++.|+.+..+.+.........++.++++|+.|++++.+++       .++
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   79 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGL   79 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            47899999999999999999999999 8999988765433322211111126889999999999666554       357


Q ss_pred             cEEEEecccCCCCC----CCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccCCCCCc
Q 023689           82 KGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (278)
Q Consensus        82 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~  153 (278)
                      |+|||+|+......    ..++++..++.|+.++..+++++    ++.+.+++|++||..++.+.+..            
T Consensus        80 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~~------------  147 (255)
T TIGR01963        80 DILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPFK------------  147 (255)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCCCC------------
Confidence            99999998754321    22344677889999988877776    55677899999987665443221            


Q ss_pred             hhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCc--------hhHHHHHHHhhCCCCccc
Q 023689          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN--------ASCAVLQQLLQGSKDTQE  222 (278)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~--------~~~~~~~~~~~~~~~~~~  222 (278)
                              ..|+.+|...+.+.+.++.+   .+++++++||+.++|+.......        ...........     .+
T Consensus       148 --------~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~  214 (255)
T TIGR01963       148 --------SAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVML-----PG  214 (255)
T ss_pred             --------chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHH-----cc
Confidence                    46999999888888777654   48999999999999985321100        00000111110     12


Q ss_pred             ccccCcccHHHHHHHHHhhhcCCCC--Cce-EEecC
Q 023689          223 YHWLGAVPVKDVAKAQVLLFESPAA--SGR-YLCTN  255 (278)
Q Consensus       223 ~~~~~~i~~~D~a~~~~~~~~~~~~--~~~-~~~~~  255 (278)
                      ...+++++++|+|+++++++.+...  .|. |++++
T Consensus       215 ~~~~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~~~~  250 (255)
T TIGR01963       215 QPTKRFVTVDEVAETALFLASDAAAGITGQAIVLDG  250 (255)
T ss_pred             CccccCcCHHHHHHHHHHHcCccccCccceEEEEcC
Confidence            2456899999999999999976432  344 55553

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.93  E-value=8e-25  Score=178.07  Aligned_cols=219  Identities=17%  Similarity=0.189  Sum_probs=157.9

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCCCCCCceEEEEccCCChhhHHHHhc---
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE---   79 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~---   79 (278)
                      |..+++|++|||||+|+||++++++|+++|+ .|+++.|+......+.. +.... .++.++.+|++|.+++.++++   
T Consensus         1 ~~~~~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~   78 (250)
T PRK07774          1 MGRFDDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADG-GTAIAVQVDVSDPDSAKAMADATV   78 (250)
T ss_pred             CcccCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHH
Confidence            4456778999999999999999999999999 89889887543322211 11111 167889999999998877665   


Q ss_pred             ----CccEEEEecccCCC-------CCCCCchhhhhhhHHhHHHHHHHHHHhc----CCCEEEEecceeeeecCCCCCCc
Q 023689           80 ----GCKGVFHVASPCTL-------EDPVDPEKELILPAVQGTLNVLEAAKRF----GVRRVVVTSSISAIVPNPGWKGK  144 (278)
Q Consensus        80 ----~~d~vi~~a~~~~~-------~~~~~~~~~~~~~n~~~~~~ll~~~~~~----~~~~~v~~Ss~~~~~~~~~~~~~  144 (278)
                          ++|+|||+||....       ....+.++..+++|+.++.++++++.+.    +.++||++||..++.+       
T Consensus        79 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-------  151 (250)
T PRK07774         79 SAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWLY-------  151 (250)
T ss_pred             HHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccCC-------
Confidence                57999999997431       1123456778999999999988888643    4578999998665321       


Q ss_pred             cccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcc
Q 023689          145 VFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ  221 (278)
Q Consensus       145 ~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~  221 (278)
                                      .+.|+.+|.+.+.+.+.+++++   ++++++++||.+.++......  ..........+.+.  
T Consensus       152 ----------------~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~--~~~~~~~~~~~~~~--  211 (250)
T PRK07774        152 ----------------SNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVT--PKEFVADMVKGIPL--  211 (250)
T ss_pred             ----------------ccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccC--CHHHHHHHHhcCCC--
Confidence                            1469999999999999998764   899999999999888654321  12233344444332  


Q ss_pred             cccccCcccHHHHHHHHHhhhcCCC--CCc-eEEecC
Q 023689          222 EYHWLGAVPVKDVAKAQVLLFESPA--ASG-RYLCTN  255 (278)
Q Consensus       222 ~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~  255 (278)
                          ..+.+++|+|++++.++....  ..| .|++.+
T Consensus       212 ----~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~v~~  244 (250)
T PRK07774        212 ----SRMGTPEDLVGMCLFLLSDEASWITGQIFNVDG  244 (250)
T ss_pred             ----CCCcCHHHHHHHHHHHhChhhhCcCCCEEEECC
Confidence                235689999999999987643  234 455544

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.93  E-value=1.4e-24  Score=177.75  Aligned_cols=221  Identities=17%  Similarity=0.067  Sum_probs=151.5

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc------
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~------   79 (278)
                      ++++|++|||||+|+||++++++|.++|+ .|++..|+....+....+..... ++.++.+|++|++++.++++      
T Consensus         5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (260)
T PRK12823          5 RFAGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGG-EALALTADLETYAGAQAAMAAAVEAF   82 (260)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHHHHHHHhcCC-eEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence            35678999999999999999999999999 88888886432211112211122 67889999999988877765      


Q ss_pred             -CccEEEEecccCCC-----CCCCCchhhhhhhHHhHHHHHHH----HHHhcCCCEEEEecceeeeecCCCCCCccccCC
Q 023689           80 -GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLE----AAKRFGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (278)
Q Consensus        80 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~----~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~  149 (278)
                       ++|++||+||....     ....+++...+++|+.++..+++    .+++.+.++||++||..++..  .         
T Consensus        83 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~--~---------  151 (260)
T PRK12823         83 GRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRGI--N---------  151 (260)
T ss_pred             CCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccCC--C---------
Confidence             57999999985321     22344567788999887775544    445566679999999655311  1         


Q ss_pred             CCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCC----------CCchhHHHHHHHhhC
Q 023689          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQP----------YLNASCAVLQQLLQG  216 (278)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~----------~~~~~~~~~~~~~~~  216 (278)
                                 ...|+.+|.+.+.+.+.++.+.   |+++++++||.++++....          .......+..+...+
T Consensus       152 -----------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (260)
T PRK12823        152 -----------RVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDS  220 (260)
T ss_pred             -----------CCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhcc
Confidence                       1469999999999999888664   9999999999999974210          001122233333333


Q ss_pred             CCCcccccccCcccHHHHHHHHHhhhcCCC--CCc-eEEecCc
Q 023689          217 SKDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASG-RYLCTNG  256 (278)
Q Consensus       217 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  256 (278)
                      .+      ...+.+++|+|+++++++....  ..| .+++.++
T Consensus       221 ~~------~~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg  257 (260)
T PRK12823        221 SL------MKRYGTIDEQVAAILFLASDEASYITGTVLPVGGG  257 (260)
T ss_pred             CC------cccCCCHHHHHHHHHHHcCcccccccCcEEeecCC
Confidence            33      2345689999999999886543  235 3455443

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.93  E-value=9.2e-25  Score=178.48  Aligned_cols=231  Identities=18%  Similarity=0.140  Sum_probs=164.1

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCCCCCCceEEEEccCCChhhHHHHhc-------C
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~   80 (278)
                      +|++|||||+|+||+++++.|.++|+ .|++++|+.+..+.+.. +.   ..+++++++|++|.+++.++++       +
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALG---DARFVPVACDLTDAASLAAALANAAAERGP   77 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhc---CCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999 89999887654333221 21   1268899999999999887775       4


Q ss_pred             ccEEEEecccCCCCC----CCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccCCCCC
Q 023689           81 CKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (278)
Q Consensus        81 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~  152 (278)
                      +|+|||++|......    ....+...+.+|+.++.++++++    .+.+.+++|++||..+.... +            
T Consensus        78 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-~------------  144 (257)
T PRK07074         78 VDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAAL-G------------  144 (257)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCCC-C------------
Confidence            799999998754321    12334566789999998888877    34556789999985543211 1            


Q ss_pred             chhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcc
Q 023689          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (278)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  229 (278)
                              ...|+.+|.+.+.+++.++.+.   |++++++|||.++++...........+........      ...+++
T Consensus       145 --------~~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~------~~~~~~  210 (257)
T PRK07074        145 --------HPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKWY------PLQDFA  210 (257)
T ss_pred             --------CcccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhcC------CCCCCC
Confidence                    1369999999999988888654   79999999999998864322111222222222222      246899


Q ss_pred             cHHHHHHHHHhhhcCCC--CCceE-Eec-CccccHHHHHHHHHHh
Q 023689          230 PVKDVAKAQVLLFESPA--ASGRY-LCT-NGIYQFGDFAERVSKL  270 (278)
Q Consensus       230 ~~~D~a~~~~~~~~~~~--~~~~~-~~~-~~~~s~~e~~~~i~~~  270 (278)
                      +++|+++++++++....  ..|.+ .+. +...+.+|+.+.+.+.
T Consensus       211 ~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~  255 (257)
T PRK07074        211 TPDDVANAVLFLASPAARAITGVCLPVDGGLTAGNREMARTLTLE  255 (257)
T ss_pred             CHHHHHHHHHHHcCchhcCcCCcEEEeCCCcCcCChhhhhhhccc
Confidence            99999999999996532  23543 344 4566799998887653

>PRK06128 oxidoreductase; Provisional

Probab=99.93  E-value=1.4e-24  Score=181.21  Aligned_cols=224  Identities=17%  Similarity=0.191  Sum_probs=158.8

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCC--cccc-cCCCCCCCceEEEEccCCChhhHHHHhc-
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS--SHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-   79 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~--~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-   79 (278)
                      |..+++|++|||||+|+||++++++|.++|+ +|++..++.+..  +... .+...+ .++.++.+|++|++++.++++ 
T Consensus        50 ~~~l~~k~vlITGas~gIG~~~a~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~  127 (300)
T PRK06128         50 FGRLQGRKALITGADSGIGRATAIAFAREGA-DIALNYLPEEEQDAAEVVQLIQAEG-RKAVALPGDLKDEAFCRQLVER  127 (300)
T ss_pred             ccccCCCEEEEecCCCcHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHHHcC-CeEEEEecCCCCHHHHHHHHHH
Confidence            4456679999999999999999999999999 777766543321  1111 111111 267889999999988887765 


Q ss_pred             ------CccEEEEecccCCC-----CCCCCchhhhhhhHHhHHHHHHHHHHhc--CCCEEEEecceeeeecCCCCCCccc
Q 023689           80 ------GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVF  146 (278)
Q Consensus        80 ------~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~  146 (278)
                            ++|+|||+||....     +...+.++..+++|+.++.++++++.+.  ..++||++||..++.+.+..     
T Consensus       128 ~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-----  202 (300)
T PRK06128        128 AVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSPTL-----  202 (300)
T ss_pred             HHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCCCc-----
Confidence                  57999999986432     1234567899999999999999998653  23589999997776543332     


Q ss_pred             cCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccc
Q 023689          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (278)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (278)
                                     ..|+.+|.+.+.+.+.++.+   +|+++++++||.+.++..... .........+....+     
T Consensus       203 ---------------~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~-~~~~~~~~~~~~~~p-----  261 (300)
T PRK06128        203 ---------------LDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSG-GQPPEKIPDFGSETP-----  261 (300)
T ss_pred             ---------------hhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccC-CCCHHHHHHHhcCCC-----
Confidence                           46999999999999888865   599999999999999864321 111222223222222     


Q ss_pred             cccCcccHHHHHHHHHhhhcCCCC--Cc-eEEecCc
Q 023689          224 HWLGAVPVKDVAKAQVLLFESPAA--SG-RYLCTNG  256 (278)
Q Consensus       224 ~~~~~i~~~D~a~~~~~~~~~~~~--~~-~~~~~~~  256 (278)
                       ...+.+++|+|.++++++.....  .| .+.+.++
T Consensus       262 -~~r~~~p~dva~~~~~l~s~~~~~~~G~~~~v~gg  296 (300)
T PRK06128        262 -MKRPGQPVEMAPLYVLLASQESSYVTGEVFGVTGG  296 (300)
T ss_pred             -CCCCcCHHHHHHHHHHHhCccccCccCcEEeeCCC
Confidence             34577999999999998865432  35 3444443

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.93  E-value=7.3e-25  Score=169.96  Aligned_cols=183  Identities=30%  Similarity=0.396  Sum_probs=140.3

Q ss_pred             EEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEecccC
Q 023689           12 VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVASPC   91 (278)
Q Consensus        12 vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~   91 (278)
                      |+|+||||++|+.++++|+++|+ +|+++.|++.+... .       .+++++.+|+.|++++.++++++|+||++++..
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~-~-------~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~   71 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED-S-------PGVEIIQGDLFDPDSVKAALKGADAVIHAAGPP   71 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH-C-------TTEEEEESCTTCHHHHHHHHTTSSEEEECCHST
T ss_pred             eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc-c-------cccccceeeehhhhhhhhhhhhcchhhhhhhhh
Confidence            79999999999999999999998 99999998875444 1       199999999999999999999999999998653


Q ss_pred             CCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhhHHHHH
Q 023689           92 TLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLA  171 (278)
Q Consensus        92 ~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~  171 (278)
                      ..             +...+.+++++|++.+++++|++||...+.....   ....+..   +.+     ..|...|..+
T Consensus        72 ~~-------------~~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~---~~~~~~~---~~~-----~~~~~~~~~~  127 (183)
T PF13460_consen   72 PK-------------DVDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPG---LFSDEDK---PIF-----PEYARDKREA  127 (183)
T ss_dssp             TT-------------HHHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTS---EEEGGTC---GGG-----HHHHHHHHHH
T ss_pred             cc-------------cccccccccccccccccccceeeeccccCCCCCc---ccccccc---cch-----hhhHHHHHHH
Confidence            31             1778889999999999999999998664332211   1111111   111     3578888888


Q ss_pred             HHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHHHHHHHHHhhhcC
Q 023689          172 EKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFES  244 (278)
Q Consensus       172 e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~  244 (278)
                      |++++    +.+++++++||+.+||+..... .....            .+....++|+.+|+|++++.++++
T Consensus       128 e~~~~----~~~~~~~ivrp~~~~~~~~~~~-~~~~~------------~~~~~~~~i~~~DvA~~~~~~l~~  183 (183)
T PF13460_consen  128 EEALR----ESGLNWTIVRPGWIYGNPSRSY-RLIKE------------GGPQGVNFISREDVAKAIVEALEN  183 (183)
T ss_dssp             HHHHH----HSTSEEEEEEESEEEBTTSSSE-EEESS------------TSTTSHCEEEHHHHHHHHHHHHH-
T ss_pred             HHHHH----hcCCCEEEEECcEeEeCCCcce-eEEec------------cCCCCcCcCCHHHHHHHHHHHhCC
Confidence            87774    6699999999999999975432 11100            122356899999999999998864

...

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.93  E-value=6.5e-25  Score=178.43  Aligned_cols=228  Identities=19%  Similarity=0.126  Sum_probs=156.4

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCC-Cccc-ccCCCCCCCceEEEEccCCChhhHHHHhc--
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHL-FALPGAGDANLRVFEADVLDSGAVSRAVE--   79 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~-~~~~-~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--   79 (278)
                      |..+++|++|||||+||||++++++|+++|+ +|++..|+.+. .+.+ ..+...+ .++.++++|++|++++.++++  
T Consensus         1 ~~~~~~k~vlItGasggiG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~~   78 (248)
T PRK07806          1 MGDLPGKTALVTGSSRGIGADTAKILAGAGA-HVVVNYRQKAPRANKVVAEIEAAG-GRASAVGADLTDEESVAALMDTA   78 (248)
T ss_pred             CCCCCCcEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCchHhHHHHHHHHHhcC-CceEEEEcCCCCHHHHHHHHHHH
Confidence            3445678999999999999999999999999 88888886532 1111 1111111 167899999999998887765  


Q ss_pred             -----CccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhc--CCCEEEEecceeeeecCCCCCCccccCCCCC
Q 023689           80 -----GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (278)
Q Consensus        80 -----~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~  152 (278)
                           ++|+|||+|+....  ...++...+++|+.++.++++++.+.  ..+++|++||..+.+...       .+..  
T Consensus        79 ~~~~~~~d~vi~~ag~~~~--~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~-------~~~~--  147 (248)
T PRK07806         79 REEFGGLDALVLNASGGME--SGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPT-------VKTM--  147 (248)
T ss_pred             HHhCCCCcEEEECCCCCCC--CCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCcc-------ccCC--
Confidence                 58999999986432  22346778999999999999999764  235899999854422110       0000  


Q ss_pred             chhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCc-hhHHHHHHHhhCCCCcccccccCc
Q 023689          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN-ASCAVLQQLLQGSKDTQEYHWLGA  228 (278)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  228 (278)
                       +.     ...|+.+|...|.+++.++.+   .++++++++|+.+-|+....... .........        ......+
T Consensus       148 -~~-----~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~  213 (248)
T PRK07806        148 -PE-----YEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRLNPGAIEAR--------REAAGKL  213 (248)
T ss_pred             -cc-----ccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccCCHHHHHHH--------Hhhhccc
Confidence             11     257999999999999988764   58999999999887764221100 000111000        0013478


Q ss_pred             ccHHHHHHHHHhhhcCCCCCc-eEEecCccc
Q 023689          229 VPVKDVAKAQVLLFESPAASG-RYLCTNGIY  258 (278)
Q Consensus       229 i~~~D~a~~~~~~~~~~~~~~-~~~~~~~~~  258 (278)
                      ++++|+|++++.++++....| .|++++...
T Consensus       214 ~~~~dva~~~~~l~~~~~~~g~~~~i~~~~~  244 (248)
T PRK07806        214 YTVSEFAAEVARAVTAPVPSGHIEYVGGADY  244 (248)
T ss_pred             CCHHHHHHHHHHHhhccccCccEEEecCccc
Confidence            999999999999998766566 466665543

>PRK06194 hypothetical protein; Provisional

Probab=99.93  E-value=5.2e-25  Score=182.82  Aligned_cols=173  Identities=14%  Similarity=0.096  Sum_probs=129.9

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccc-ccCCCCCCCceEEEEccCCChhhHHHHhc---
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL-FALPGAGDANLRVFEADVLDSGAVSRAVE---   79 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~-~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---   79 (278)
                      |..+++|++|||||+|+||++++++|+++|+ .|++++|+.+..... ..+... ..++.++.+|++|.+++.++++   
T Consensus         1 m~~~~~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~~   78 (287)
T PRK06194          1 MKDFAGKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQ-GAEVLGVRTDVSDAAQVEALADAAL   78 (287)
T ss_pred             CcCCCCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHH
Confidence            3445578999999999999999999999999 888888865433222 111111 1268889999999999988876   


Q ss_pred             ----CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHH----HHhcCC------CEEEEecceeeeecCCCC
Q 023689           80 ----GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEA----AKRFGV------RRVVVTSSISAIVPNPGW  141 (278)
Q Consensus        80 ----~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~----~~~~~~------~~~v~~Ss~~~~~~~~~~  141 (278)
                          ++|+|||+||.....    ...+.++..+++|+.++.+++++    +.+.+.      +++|++||.+++++.+..
T Consensus        79 ~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~  158 (287)
T PRK06194         79 ERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAM  158 (287)
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCC
Confidence                479999999976542    22345677799999999987776    444433      589999998776553321


Q ss_pred             CCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc-----CCceEEEecceeeCCC
Q 023689          142 KGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH-----GVDVVAIHPATCLGPL  198 (278)
Q Consensus       142 ~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~-----~~~~~~lrp~~i~g~~  198 (278)
                                          +.|+.+|.+.+.+.+.++.+.     +++++.+.|+.+.++.
T Consensus       159 --------------------~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~  200 (287)
T PRK06194        159 --------------------GIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGI  200 (287)
T ss_pred             --------------------cchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCcc
Confidence                                579999999999998887654     4788888998886664

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.93  E-value=2.2e-24  Score=188.38  Aligned_cols=232  Identities=16%  Similarity=0.149  Sum_probs=158.5

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CC-------C-CCCCceEEEEccCCChhhHHHH
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LP-------G-AGDANLRVFEADVLDSGAVSRA   77 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~-------~-~~~~~v~~~~~Dl~d~~~~~~~   77 (278)
                      +++|+||||||+|+||++++++|++.|+ +|++++|+.+....+.. +.       + ....+++++.+|++|.+++.++
T Consensus        78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~-~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~a  156 (576)
T PLN03209         78 KDEDLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPA  156 (576)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHH
Confidence            3578999999999999999999999999 89999997765433211 10       0 0112688999999999999999


Q ss_pred             hcCccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhh
Q 023689           78 VEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYC  157 (278)
Q Consensus        78 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~  157 (278)
                      +.++|+|||++|....  ...++...+++|+.|+.+++++|++.++++||++||.++....       ..+..     + 
T Consensus       157 LggiDiVVn~AG~~~~--~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g-------~p~~~-----~-  221 (576)
T PLN03209        157 LGNASVVICCIGASEK--EVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVG-------FPAAI-----L-  221 (576)
T ss_pred             hcCCCEEEEccccccc--cccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccC-------ccccc-----h-
Confidence            9999999999986432  1224567789999999999999999999999999997652110       00000     1 


Q ss_pred             hccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHHHHHHH
Q 023689          158 KSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKA  237 (278)
Q Consensus       158 ~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  237 (278)
                      . ....|...|..+|+.+.    .+|+++++||||.++++.......  ..+ .....+.      .....+..+|+|++
T Consensus       222 ~-sk~~~~~~KraaE~~L~----~sGIrvTIVRPG~L~tp~d~~~~t--~~v-~~~~~d~------~~gr~isreDVA~v  287 (576)
T PLN03209        222 N-LFWGVLCWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKET--HNL-TLSEEDT------LFGGQVSNLQVAEL  287 (576)
T ss_pred             h-hHHHHHHHHHHHHHHHH----HcCCCEEEEECCeecCCccccccc--cce-eeccccc------cCCCccCHHHHHHH
Confidence            0 11346677777787765    679999999999999875432100  000 0000010      12345899999999


Q ss_pred             HHhhhcCCC-CCc-eE-EecCcc---ccHHHHHHHHH
Q 023689          238 QVLLFESPA-ASG-RY-LCTNGI---YQFGDFAERVS  268 (278)
Q Consensus       238 ~~~~~~~~~-~~~-~~-~~~~~~---~s~~e~~~~i~  268 (278)
                      ++.++.++. ..+ ++ ++.+..   ..+.+++..+-
T Consensus       288 VvfLasd~~as~~kvvevi~~~~~p~~~~~~~~~~ip  324 (576)
T PLN03209        288 MACMAKNRRLSYCKVVEVIAETTAPLTPMEELLAKIP  324 (576)
T ss_pred             HHHHHcCchhccceEEEEEeCCCCCCCCHHHHHHhcc
Confidence            999998664 334 45 444432   45555554443

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.93  E-value=5.2e-25  Score=179.36  Aligned_cols=226  Identities=14%  Similarity=0.078  Sum_probs=154.6

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCC-CCcc-cccCCCCCCCceEEEEccCCChhhHHHHhc--
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS-DSSH-LFALPGAGDANLRVFEADVLDSGAVSRAVE--   79 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~-~~~~-~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--   79 (278)
                      |++++++++|||||+|+||++++++|+++|+ .|++..|+.. .... ...+...+. ++.++.+|+++++++.++++  
T Consensus         1 ~~~~~~~~vlitGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~   78 (252)
T PRK06077          1 MYSLKDKVVVVTGSGRGIGRAIAVRLAKEGS-LVVVNAKKRAEEMNETLKMVKENGG-EGIGVLADVSTREGCETLAKAT   78 (252)
T ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHcCC-eeEEEEeccCCHHHHHHHHHHH
Confidence            3445678999999999999999999999999 7766665332 1111 111111112 67788999999998877765  


Q ss_pred             -----CccEEEEecccCCCCC----CCCchhhhhhhHHhHHHHHHHHHHhc--CCCEEEEecceeeeecCCCCCCccccC
Q 023689           80 -----GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDE  148 (278)
Q Consensus        80 -----~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~E  148 (278)
                           ++|+|||+||......    ..+.++..+++|+.++.++++++.+.  ..++||++||..++.+.+.        
T Consensus        79 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------  150 (252)
T PRK06077         79 IDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRPAYG--------  150 (252)
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCCCCC--------
Confidence                 5799999998644321    12234677899999999998888653  2368999999776543322        


Q ss_pred             CCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc--CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccccc
Q 023689          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (278)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (278)
                                  ...|+.+|...+.+.+.++++.  ++.+++++||.+.++.....................     ...
T Consensus       151 ------------~~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~-----~~~  213 (252)
T PRK06077        151 ------------LSIYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKFT-----LMG  213 (252)
T ss_pred             ------------chHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhcccccHHHHHHhcC-----cCC
Confidence                        2579999999999999988765  799999999999887532211000000011111111     134


Q ss_pred             CcccHHHHHHHHHhhhcCCCCCc-eEEecCc
Q 023689          227 GAVPVKDVAKAQVLLFESPAASG-RYLCTNG  256 (278)
Q Consensus       227 ~~i~~~D~a~~~~~~~~~~~~~~-~~~~~~~  256 (278)
                      .+++++|+|++++.++.++...| .|++.++
T Consensus       214 ~~~~~~dva~~~~~~~~~~~~~g~~~~i~~g  244 (252)
T PRK06077        214 KILDPEEVAEFVAAILKIESITGQVFVLDSG  244 (252)
T ss_pred             CCCCHHHHHHHHHHHhCccccCCCeEEecCC
Confidence            68999999999999997655444 5665543

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.93  E-value=1.1e-24  Score=177.32  Aligned_cols=216  Identities=20%  Similarity=0.207  Sum_probs=155.6

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCCCCCCceEEEEccCCChhhHHHHhc------
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE------   79 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~------   79 (278)
                      +++|++|||||+|+||++++++|+++|+ +|+++.|+++....+.. +.. + .++.++++|++|++++.++++      
T Consensus         3 ~~~~~vlItGasg~iG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   79 (251)
T PRK07231          3 LEGKVAIVTGASSGIGEGIARRFAAEGA-RVVVTDRNEEAAERVAAEILA-G-GRAIAVAADVSDEADVEAAVAAALERF   79 (251)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhc-C-CeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            5678999999999999999999999999 79999998755433221 111 1 268899999999999988775      


Q ss_pred             -CccEEEEecccCCCC-----CCCCchhhhhhhHHhHHHHHHHHHH----hcCCCEEEEecceeeeecCCCCCCccccCC
Q 023689           80 -GCKGVFHVASPCTLE-----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (278)
Q Consensus        80 -~~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~  149 (278)
                       ++|+|||+|+.....     ...+.++..+++|+.++.++++.+.    +.+.++||++||..++++.+..        
T Consensus        80 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~--------  151 (251)
T PRK07231         80 GSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPGL--------  151 (251)
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCCc--------
Confidence             469999999864321     1234567889999988777776664    4567899999997776554332        


Q ss_pred             CCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCc-hhHHHHHHHhhCCCCcccccc
Q 023689          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN-ASCAVLQQLLQGSKDTQEYHW  225 (278)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  225 (278)
                                  ..|+.+|...+.+.+.++.+   .++++++++||.+.++....... ........+....+      .
T Consensus       152 ------------~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~------~  213 (251)
T PRK07231        152 ------------GWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATIP------L  213 (251)
T ss_pred             ------------hHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcCCC------C
Confidence                        56999999999888887764   38999999999998875432211 01111122222222      3


Q ss_pred             cCcccHHHHHHHHHhhhcCCCC--CceE
Q 023689          226 LGAVPVKDVAKAQVLLFESPAA--SGRY  251 (278)
Q Consensus       226 ~~~i~~~D~a~~~~~~~~~~~~--~~~~  251 (278)
                      ..+++++|+|++++.++.....  .|.+
T Consensus       214 ~~~~~~~dva~~~~~l~~~~~~~~~g~~  241 (251)
T PRK07231        214 GRLGTPEDIANAALFLASDEASWITGVT  241 (251)
T ss_pred             CCCcCHHHHHHHHHHHhCccccCCCCCe
Confidence            4678999999999999975432  3554

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.93  E-value=1.1e-24  Score=177.29  Aligned_cols=219  Identities=17%  Similarity=0.141  Sum_probs=151.6

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEE-EecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc------
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINA-TVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~-~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~------   79 (278)
                      .+|++|||||+|+||++++++|+++|+ .|++ ..|+....+... .+.... .++.++.+|++|++++.++++      
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGY-DIAVNYARSRKAAEETAEEIEALG-RKALAVKANVGDVEKIKEMFAQIDEEF   80 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcC-CeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            357999999999999999999999999 6654 456543322211 111111 268899999999998888776      


Q ss_pred             -CccEEEEecccCCCCC----CCCchhhhhhhHHhHHHHHHHHHHh----cCCCEEEEecceeeeecCCCCCCccccCCC
Q 023689           80 -GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (278)
Q Consensus        80 -~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~  150 (278)
                       ++|+|||+||......    ..+.+...+++|+.++.++++++.+    .+.++||++||..+..+.+.          
T Consensus        81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~----------  150 (250)
T PRK08063         81 GRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLEN----------  150 (250)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCC----------
Confidence             4799999998654322    2234456788999999888887754    45679999999766443222          


Q ss_pred             CCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccC
Q 023689          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (278)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (278)
                                ...|+.+|.+.+.+++.++.+   .|+++++++|+.+.++....... ...+........+      ...
T Consensus       151 ----------~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~-~~~~~~~~~~~~~------~~~  213 (250)
T PRK08063        151 ----------YTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPN-REELLEDARAKTP------AGR  213 (250)
T ss_pred             ----------ccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccC-chHHHHHHhcCCC------CCC
Confidence                      157999999999999888764   58999999999998876432211 1122222221111      235


Q ss_pred             cccHHHHHHHHHhhhcCCCC--Cce-EEecC
Q 023689          228 AVPVKDVAKAQVLLFESPAA--SGR-YLCTN  255 (278)
Q Consensus       228 ~i~~~D~a~~~~~~~~~~~~--~~~-~~~~~  255 (278)
                      +++++|+|+++++++.++..  .|. +++.+
T Consensus       214 ~~~~~dva~~~~~~~~~~~~~~~g~~~~~~g  244 (250)
T PRK08063        214 MVEPEDVANAVLFLCSPEADMIRGQTIIVDG  244 (250)
T ss_pred             CcCHHHHHHHHHHHcCchhcCccCCEEEECC
Confidence            79999999999999876432  354 44443

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.93  E-value=3.2e-24  Score=177.12  Aligned_cols=236  Identities=24%  Similarity=0.204  Sum_probs=165.2

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCC-CCCceEEEEccCCChhhHHHHhc-----
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGA-GDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~-~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      +++|++|||||+|+||+++++.|+++|+ .|+++.|+.+...... .+... ...++.++.+|++|++++.++++     
T Consensus         5 ~~~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (276)
T PRK05875          5 FQDRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAW   83 (276)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4568999999999999999999999999 8998888754432221 11110 01268899999999998888776     


Q ss_pred             --CccEEEEecccCCC-----CCCCCchhhhhhhHHhHHHHHHHHHHh----cCCCEEEEecceeeeecCCCCCCccccC
Q 023689           80 --GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (278)
Q Consensus        80 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~E  148 (278)
                        ++|++||+||....     ....+++...+++|+.++.++++++.+    .+.++|+++||..+..+.+.        
T Consensus        84 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~--------  155 (276)
T PRK05875         84 HGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRW--------  155 (276)
T ss_pred             cCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCCC--------
Confidence              67999999985422     122334678899999999999887644    34468999998665433221        


Q ss_pred             CCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccc
Q 023689          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (278)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (278)
                                  .+.|+.+|.+.|.+++.++.+.   +++++++||+.+.++....... ............+      .
T Consensus       156 ------------~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~-~~~~~~~~~~~~~------~  216 (276)
T PRK05875        156 ------------FGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITE-SPELSADYRACTP------L  216 (276)
T ss_pred             ------------CcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCcccccccc-CHHHHHHHHcCCC------C
Confidence                        2579999999999999888654   7999999999998876433211 1111222222222      3


Q ss_pred             cCcccHHHHHHHHHhhhcCCCC--Cc-eEEec-Cccc----cHHHHHHHHHHh
Q 023689          226 LGAVPVKDVAKAQVLLFESPAA--SG-RYLCT-NGIY----QFGDFAERVSKL  270 (278)
Q Consensus       226 ~~~i~~~D~a~~~~~~~~~~~~--~~-~~~~~-~~~~----s~~e~~~~i~~~  270 (278)
                      ..+++++|+|+++.+++.++..  .| .+++. +..+    +..|+++.+.+.
T Consensus       217 ~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~  269 (276)
T PRK05875        217 PRVGEVEDVANLAMFLLSDAASWITGQVINVDGGHMLRRGPDFSSMLEPVFGA  269 (276)
T ss_pred             CCCcCHHHHHHHHHHHcCchhcCcCCCEEEECCCeeccCCccHHHHHHHHhhH
Confidence            4567899999999999987543  25 45544 4444    777777776654

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.93  E-value=2.3e-24  Score=175.81  Aligned_cols=223  Identities=16%  Similarity=0.127  Sum_probs=159.0

Q ss_pred             CccccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc
Q 023689            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE   79 (278)
Q Consensus         1 m~~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~   79 (278)
                      |..+..+++|++|||||+|+||++++++|+++|+ +|++..|+.+...... .+.... .++.++.+|++|++++.++++
T Consensus         1 ~~~~~~l~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dl~~~~~~~~~~~   78 (254)
T PRK08085          1 MNDLFSLAGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEG-IKAHAAPFNVTHKQEVEAAIE   78 (254)
T ss_pred             CcccccCCCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcC-CeEEEEecCCCCHHHHHHHHH
Confidence            4445567789999999999999999999999999 8888888754432221 111111 267888999999998888764


Q ss_pred             -------CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHHHh----cCCCEEEEecceeeeecCCCCCCc
Q 023689           80 -------GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGK  144 (278)
Q Consensus        80 -------~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~  144 (278)
                             ++|+|||+||....    +...++++..+++|+.++..+++++.+    .+.++||++||..+..+.+.    
T Consensus        79 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~----  154 (254)
T PRK08085         79 HIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDT----  154 (254)
T ss_pred             HHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCCC----
Confidence                   47999999986432    223456788999999998888887644    45578999999766544322    


Q ss_pred             cccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcc
Q 023689          145 VFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ  221 (278)
Q Consensus       145 ~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~  221 (278)
                                      ...|+.+|.+.+.+.+.++.+   +|+++++++||.+.++....... ............|   
T Consensus       155 ----------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~-~~~~~~~~~~~~p---  214 (254)
T PRK08085        155 ----------------ITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVE-DEAFTAWLCKRTP---  214 (254)
T ss_pred             ----------------CcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhcc-CHHHHHHHHhcCC---
Confidence                            157999999999999888765   48999999999999986433211 1111222222222   


Q ss_pred             cccccCcccHHHHHHHHHhhhcCCC--CCceEE
Q 023689          222 EYHWLGAVPVKDVAKAQVLLFESPA--ASGRYL  252 (278)
Q Consensus       222 ~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~  252 (278)
                         ...+..++|+|.++.+++....  ..|..+
T Consensus       215 ---~~~~~~~~~va~~~~~l~~~~~~~i~G~~i  244 (254)
T PRK08085        215 ---AARWGDPQELIGAAVFLSSKASDFVNGHLL  244 (254)
T ss_pred             ---CCCCcCHHHHHHHHHHHhCccccCCcCCEE
Confidence               3457789999999999987533  345443

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.93  E-value=2.8e-24  Score=177.42  Aligned_cols=215  Identities=21%  Similarity=0.251  Sum_probs=152.2

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc--------C
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--------G   80 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--------~   80 (278)
                      +|++|||||+|+||++++++|.++|+ .|++..|+++..+.+...      +++++.+|++|.++++++++        .
T Consensus         4 ~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~------~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~   76 (277)
T PRK05993          4 KRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAE------GLEAFQLDYAEPESIAALVAQVLELSGGR   76 (277)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHC------CceEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            47899999999999999999999999 899999876654433321      67889999999988877664        4


Q ss_pred             ccEEEEecccCCCCC----CCCchhhhhhhHHhH----HHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCC
Q 023689           81 CKGVFHVASPCTLED----PVDPEKELILPAVQG----TLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (278)
Q Consensus        81 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~----~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~  152 (278)
                      +|+|||+||......    ..+.++..+++|+.|    +..+++.+++.+.++||++||..++.+.+.            
T Consensus        77 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~------------  144 (277)
T PRK05993         77 LDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKY------------  144 (277)
T ss_pred             ccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCCCc------------
Confidence            699999998755422    223457789999988    666777777787889999999766543322            


Q ss_pred             chhhhhccCchhhhHHHHHHHHHHHHHH---hcCCceEEEecceeeCCCCCCCCchh------------HHHHHHH--hh
Q 023689          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLNAS------------CAVLQQL--LQ  215 (278)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lrp~~i~g~~~~~~~~~~------------~~~~~~~--~~  215 (278)
                              ...|+.+|.+.+.+.+.++.   .+|+++++++||.+.++.........            ..+....  ..
T Consensus       145 --------~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (277)
T PRK05993        145 --------RGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRFRANALAAFKRWIDIENSVHRAAYQQQMARLE  216 (277)
T ss_pred             --------cchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCchhhHHHHHHhhhhccccchhHHHHHHHHHHHH
Confidence                    15799999999998887763   46999999999999887533211000            0000000  00


Q ss_pred             CCCCcccccccCcccHHHHHHHHHhhhcCCCCCceEEec
Q 023689          216 GSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGRYLCT  254 (278)
Q Consensus       216 ~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~  254 (278)
                      ...    ......+.++++|+.++.++.+......|+.+
T Consensus       217 ~~~----~~~~~~~~~~~va~~i~~a~~~~~~~~~~~~~  251 (277)
T PRK05993        217 GGG----SKSRFKLGPEAVYAVLLHALTAPRPRPHYRVT  251 (277)
T ss_pred             hhh----hccccCCCHHHHHHHHHHHHcCCCCCCeeeeC
Confidence            000    01122468999999999999876554455543

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.93  E-value=1.4e-24  Score=177.54  Aligned_cols=230  Identities=18%  Similarity=0.160  Sum_probs=160.4

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc------
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~------   79 (278)
                      ++++|++|||||+|+||++++++|+++|+ .|+++.|+++..+....+..... ++.++.+|+++++++.++++      
T Consensus         4 ~l~~~~ilItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (258)
T PRK08628          4 NLKDKVVIVTGGASGIGAAISLRLAEEGA-IPVIFGRSAPDDEFAEELRALQP-RAEFVQVDLTDDAQCRDAVEQTVAKF   81 (258)
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHcCC-cEEEEcCChhhHHHHHHHHhcCC-ceEEEEccCCCHHHHHHHHHHHHHhc
Confidence            36678999999999999999999999999 78888887654322222211122 68899999999998888775      


Q ss_pred             -CccEEEEecccCCC---CCCCCchhhhhhhHHhHHHHHHHHHHh---cCCCEEEEecceeeeecCCCCCCccccCCCCC
Q 023689           80 -GCKGVFHVASPCTL---EDPVDPEKELILPAVQGTLNVLEAAKR---FGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (278)
Q Consensus        80 -~~d~vi~~a~~~~~---~~~~~~~~~~~~~n~~~~~~ll~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~  152 (278)
                       ++|+|||+||....   +...++++..+++|+.++.++.+++.+   .+.++||++||..+.++.+..           
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~-----------  150 (258)
T PRK08628         82 GRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQGGT-----------  150 (258)
T ss_pred             CCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCCCCC-----------
Confidence             57999999986432   111245778899999999998887743   234689999998776554332           


Q ss_pred             chhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCc---hhHHHHHHHhhCCCCccccccc
Q 023689          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN---ASCAVLQQLLQGSKDTQEYHWL  226 (278)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~  226 (278)
                               ..|+.+|...+.+.+.++.+   ++++++.++||.++++.......   .............+.     ..
T Consensus       151 ---------~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~  216 (258)
T PRK08628        151 ---------SGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPL-----GH  216 (258)
T ss_pred             ---------chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCc-----cc
Confidence                     57999999999999988753   58999999999999985322110   011111122111111     12


Q ss_pred             CcccHHHHHHHHHhhhcCCC--CCce-EEecCccccHHH
Q 023689          227 GAVPVKDVAKAQVLLFESPA--ASGR-YLCTNGIYQFGD  262 (278)
Q Consensus       227 ~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~~~s~~e  262 (278)
                      .++.++|+|+++++++....  ..|. +.+.++...+++
T Consensus       217 ~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~~~~~~  255 (258)
T PRK08628        217 RMTTAEEIADTAVFLLSERSSHTTGQWLFVDGGYVHLDR  255 (258)
T ss_pred             cCCCHHHHHHHHHHHhChhhccccCceEEecCCcccccc
Confidence            46889999999999987643  3353 444444444433

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.93  E-value=3.3e-24  Score=174.24  Aligned_cols=220  Identities=18%  Similarity=0.128  Sum_probs=155.6

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc-------
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------   79 (278)
                      +++|++|||||+|+||++++++|+++|+ .|++..|+... +....+...+ .++.++++|+++++++.++++       
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~~~-~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (248)
T TIGR01832         3 LEGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSEPS-ETQQQVEALG-RRFLSLTADLSDIEAIKALVDSAVEEFG   79 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCchHH-HHHHHHHhcC-CceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            5689999999999999999999999999 88888875421 1111111111 268899999999998887664       


Q ss_pred             CccEEEEecccCCCCC----CCCchhhhhhhHHhHHHHHHHHHHh----cC-CCEEEEecceeeeecCCCCCCccccCCC
Q 023689           80 GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKR----FG-VRRVVVTSSISAIVPNPGWKGKVFDETS  150 (278)
Q Consensus        80 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~----~~-~~~~v~~Ss~~~~~~~~~~~~~~~~E~~  150 (278)
                      ++|++||+||......    ..+.++..+++|+.++.++++++.+    .+ .+++|++||..++.+.+..         
T Consensus        80 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~---------  150 (248)
T TIGR01832        80 HIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRV---------  150 (248)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCC---------
Confidence            5899999998754321    2245678899999999998888743    33 4689999997665433221         


Q ss_pred             CCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccC
Q 023689          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (278)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (278)
                                 ..|+.+|.+.+.+.+.++.+.   |+++++++||.+.++....... ............+      ...
T Consensus       151 -----------~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~~------~~~  212 (248)
T TIGR01832       151 -----------PSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRA-DEDRNAAILERIP------AGR  212 (248)
T ss_pred             -----------chhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhcccc-ChHHHHHHHhcCC------CCC
Confidence                       469999999999999888764   8999999999999886432111 0111111111111      356


Q ss_pred             cccHHHHHHHHHhhhcCCCC--CceEEecCc
Q 023689          228 AVPVKDVAKAQVLLFESPAA--SGRYLCTNG  256 (278)
Q Consensus       228 ~i~~~D~a~~~~~~~~~~~~--~~~~~~~~~  256 (278)
                      +++++|+|+++++++.....  .|.++..++
T Consensus       213 ~~~~~dva~~~~~l~s~~~~~~~G~~i~~dg  243 (248)
T TIGR01832       213 WGTPDDIGGPAVFLASSASDYVNGYTLAVDG  243 (248)
T ss_pred             CcCHHHHHHHHHHHcCccccCcCCcEEEeCC
Confidence            89999999999999875432  465544433

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK06398 aldose dehydrogenase; Validated

Probab=99.93  E-value=8e-24  Score=172.92  Aligned_cols=210  Identities=15%  Similarity=0.125  Sum_probs=152.2

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc----
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~----   79 (278)
                      |+++++|++|||||+|+||++++++|.++|+ .|++..|+.....           ++.++++|++|++++.++++    
T Consensus         1 ~~~l~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~~-----------~~~~~~~D~~~~~~i~~~~~~~~~   68 (258)
T PRK06398          1 DLGLKDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSYN-----------DVDYFKVDVSNKEQVIKGIDYVIS   68 (258)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccccC-----------ceEEEEccCCCHHHHHHHHHHHHH
Confidence            4456789999999999999999999999999 8888888654311           67899999999998888775    


Q ss_pred             ---CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHHH----hcCCCEEEEecceeeeecCCCCCCccccC
Q 023689           80 ---GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (278)
Q Consensus        80 ---~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E  148 (278)
                         ++|++||+||....    +...++++..+++|+.++..+++++.    +.+.+++|++||..+..+.+.        
T Consensus        69 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------  140 (258)
T PRK06398         69 KYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRN--------  140 (258)
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCC--------
Confidence               57999999987443    12234567889999999988887764    345678999999776544332        


Q ss_pred             CCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc--CCceEEEecceeeCCCCCCCC-----chhHH---HHHHHhhCCC
Q 023689          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQPYL-----NASCA---VLQQLLQGSK  218 (278)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~~~~~~lrp~~i~g~~~~~~~-----~~~~~---~~~~~~~~~~  218 (278)
                                  ...|+.+|.+.+.+.+.++.+.  ++++++++||.+.++......     .....   ......... 
T Consensus       141 ------------~~~Y~~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  207 (258)
T PRK06398        141 ------------AAAYVTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMH-  207 (258)
T ss_pred             ------------CchhhhhHHHHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcC-
Confidence                        2579999999999999988764  499999999999887432110     00000   011111111 


Q ss_pred             CcccccccCcccHHHHHHHHHhhhcCCC--CCceE
Q 023689          219 DTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRY  251 (278)
Q Consensus       219 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~  251 (278)
                           ....+..++|+|+++++++....  ..|..
T Consensus       208 -----~~~~~~~p~eva~~~~~l~s~~~~~~~G~~  237 (258)
T PRK06398        208 -----PMKRVGKPEEVAYVVAFLASDLASFITGEC  237 (258)
T ss_pred             -----CcCCCcCHHHHHHHHHHHcCcccCCCCCcE
Confidence                 12356789999999999886533  24544

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.93  E-value=6.6e-25  Score=174.66  Aligned_cols=207  Identities=21%  Similarity=0.216  Sum_probs=153.3

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCCCCCCceEEEEccCCChhhHHHHhc------
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE------   79 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~------   79 (278)
                      .+++++||||||++||.+++++|.++|+ +|+++.|+.++...++. +....+..++++.+|+++++++.++.+      
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~   82 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG   82 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence            4568999999999999999999999999 99999998887665543 333333478899999999998888764      


Q ss_pred             -CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccCCC
Q 023689           80 -GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (278)
Q Consensus        80 -~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~  150 (278)
                       .+|++|||||....+    ..++..++.+++|+.+...|.++.    .+++.+++|+++|.+++.+.+..         
T Consensus        83 ~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~~---------  153 (265)
T COG0300          83 GPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYM---------  153 (265)
T ss_pred             CcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcch---------
Confidence             589999999976653    345566889999987776665554    66677899999999988776553         


Q ss_pred             CCchhhhhccCchhhhHHHHHHHHHHHHH---HhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccC
Q 023689          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFA---EKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (278)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~---~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (278)
                                 +.|+.||...-.+...+.   +.+|+.++.+.||.+.++.....             +.........+-
T Consensus       154 -----------avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~~-------------~~~~~~~~~~~~  209 (265)
T COG0300         154 -----------AVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDAK-------------GSDVYLLSPGEL  209 (265)
T ss_pred             -----------HHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCcccccccccc-------------ccccccccchhh
Confidence                       456666655543333333   26799999999999998875311             111111112456


Q ss_pred             cccHHHHHHHHHhhhcCCCC
Q 023689          228 AVPVKDVAKAQVLLFESPAA  247 (278)
Q Consensus       228 ~i~~~D~a~~~~~~~~~~~~  247 (278)
                      ++.++|+|+..+..+++.+.
T Consensus       210 ~~~~~~va~~~~~~l~~~k~  229 (265)
T COG0300         210 VLSPEDVAEAALKALEKGKR  229 (265)
T ss_pred             ccCHHHHHHHHHHHHhcCCc
Confidence            78999999999999987543

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.93  E-value=1.6e-24  Score=176.14  Aligned_cols=211  Identities=20%  Similarity=0.147  Sum_probs=152.1

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc---
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE---   79 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---   79 (278)
                      |..+++|+++||||+|+||++++++|+++|+ .|+++.|+.+...... .+   +. ++.++++|++|.+++.++++   
T Consensus         1 m~~~~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~---~~-~~~~~~~D~~~~~~~~~~~~~~~   75 (249)
T PRK06500          1 MSRLQGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAEL---GE-SALVIRADAGDVAAQKALAQALA   75 (249)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHh---CC-ceEEEEecCCCHHHHHHHHHHHH
Confidence            3455678999999999999999999999999 8888888654322221 11   11 67889999999987766544   


Q ss_pred             ----CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHhc--CCCEEEEecceeeeecCCCCCCccccCC
Q 023689           80 ----GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDET  149 (278)
Q Consensus        80 ----~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~E~  149 (278)
                          ++|+|||+||.....    ...+.++..+++|+.++.++++++.+.  ..+++|++||..+.++.+..        
T Consensus        76 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~~~~--------  147 (249)
T PRK06500         76 EAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGMPNS--------  147 (249)
T ss_pred             HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCCCCc--------
Confidence                579999999865432    223466789999999999999999752  33578888887766554322        


Q ss_pred             CCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCC---CchhHHHHHHHhhCCCCcccc
Q 023689          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPY---LNASCAVLQQLLQGSKDTQEY  223 (278)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~  223 (278)
                                  ..|+.+|.+.|.+.+.++.+   .|++++++|||.++++.....   ......+........+.    
T Consensus       148 ------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~----  211 (249)
T PRK06500        148 ------------SVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPL----  211 (249)
T ss_pred             ------------cHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCC----
Confidence                        57999999999999888764   389999999999999853211   01112222333333322    


Q ss_pred             cccCcccHHHHHHHHHhhhcCC
Q 023689          224 HWLGAVPVKDVAKAQVLLFESP  245 (278)
Q Consensus       224 ~~~~~i~~~D~a~~~~~~~~~~  245 (278)
                        ..+.+++|+|+++.+++...
T Consensus       212 --~~~~~~~~va~~~~~l~~~~  231 (249)
T PRK06500        212 --GRFGTPEEIAKAVLYLASDE  231 (249)
T ss_pred             --CCCcCHHHHHHHHHHHcCcc
Confidence              23568999999999988653

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.93  E-value=2.9e-24  Score=174.65  Aligned_cols=209  Identities=20%  Similarity=0.174  Sum_probs=151.4

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCC-Ccccc----cCCCCCCCceEEEEccCCChhhHHHHh
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHLF----ALPGAGDANLRVFEADVLDSGAVSRAV   78 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~-~~~~~----~~~~~~~~~v~~~~~Dl~d~~~~~~~~   78 (278)
                      |..+++|++|||||+|+||++++++|.++|+ +|+++.|.... .+...    .+.... .++.++.+|++|++++.+++
T Consensus         1 ~~~~~~~~ilItGasg~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~   78 (249)
T PRK12827          1 MASLDSRRVLITGGSGGLGRAIAVRLAADGA-DVIVLDIHPMRGRAEADAVAAGIEAAG-GKALGLAFDVRDFAATRAAL   78 (249)
T ss_pred             CCCcCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEcCcccccHHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHH
Confidence            3445578999999999999999999999999 78776653221 11111    111111 26889999999999888876


Q ss_pred             c-------CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHHH-----hcCCCEEEEecceeeeecCCCCC
Q 023689           79 E-------GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAK-----RFGVRRVVVTSSISAIVPNPGWK  142 (278)
Q Consensus        79 ~-------~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~-----~~~~~~~v~~Ss~~~~~~~~~~~  142 (278)
                      +       ++|+|||+||....    ....+++...+++|+.++.++++++.     +.+.+++|++||..++++.... 
T Consensus        79 ~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-  157 (249)
T PRK12827         79 DAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQ-  157 (249)
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCCCC-
Confidence            4       58999999987552    22234567789999999999999987     4566789999997776554332 


Q ss_pred             CccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCC
Q 023689          143 GKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKD  219 (278)
Q Consensus       143 ~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~  219 (278)
                                         ..|+.+|...+.+.+.++.+   .+++++++|||.+.++......  ..   .......+ 
T Consensus       158 -------------------~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~--~~---~~~~~~~~-  212 (249)
T PRK12827        158 -------------------VNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAA--PT---EHLLNPVP-  212 (249)
T ss_pred             -------------------chhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccc--hH---HHHHhhCC-
Confidence                               56999999999888888764   4899999999999998654321  11   11122222 


Q ss_pred             cccccccCcccHHHHHHHHHhhhcCC
Q 023689          220 TQEYHWLGAVPVKDVAKAQVLLFESP  245 (278)
Q Consensus       220 ~~~~~~~~~i~~~D~a~~~~~~~~~~  245 (278)
                           ...+.+++|+|+++..++...
T Consensus       213 -----~~~~~~~~~va~~~~~l~~~~  233 (249)
T PRK12827        213 -----VQRLGEPDEVAALVAFLVSDA  233 (249)
T ss_pred             -----CcCCcCHHHHHHHHHHHcCcc
Confidence                 223568999999999988654

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.93  E-value=1.7e-24  Score=175.51  Aligned_cols=218  Identities=24%  Similarity=0.210  Sum_probs=155.4

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCCCCCCceEEEEccCCChhhHHHHhc------
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE------   79 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~------   79 (278)
                      +.+|++|||||+|+||++++++|.++|+ .|+++.|++...+.... +..... +++++.+|++|++++.++++      
T Consensus         3 ~~~~~ilItGasg~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (246)
T PRK05653          3 LQGKTALVTGASRGIGRAIALRLAADGA-KVVIYDSNEEAAEALAAELRAAGG-EARVLVFDVSDEAAVRALIEAAVEAF   80 (246)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCC-ceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            3457999999999999999999999999 79999987654332211 111122 68899999999998887765      


Q ss_pred             -CccEEEEecccCCCCC----CCCchhhhhhhHHhHHHHHHHHHH----hcCCCEEEEecceeeeecCCCCCCccccCCC
Q 023689           80 -GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (278)
Q Consensus        80 -~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~  150 (278)
                       .+|+|||+||......    ..+.+...++.|+.++.++++++.    +.+.++||++||..+.++...          
T Consensus        81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~~----------  150 (246)
T PRK05653         81 GALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNPG----------  150 (246)
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCCC----------
Confidence             3599999998754421    223456778999999999988884    456789999998766543222          


Q ss_pred             CCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccC
Q 023689          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (278)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (278)
                                ...|+.+|...+.+.+.++++   .+++++++||+.++|+.....   ............+      ...
T Consensus       151 ----------~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~---~~~~~~~~~~~~~------~~~  211 (246)
T PRK05653        151 ----------QTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGL---PEEVKAEILKEIP------LGR  211 (246)
T ss_pred             ----------CcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhh---hHHHHHHHHhcCC------CCC
Confidence                      156999999998888887754   489999999999999875431   1111111222211      366


Q ss_pred             cccHHHHHHHHHhhhcCCCC--Cc-eEEecC
Q 023689          228 AVPVKDVAKAQVLLFESPAA--SG-RYLCTN  255 (278)
Q Consensus       228 ~i~~~D~a~~~~~~~~~~~~--~~-~~~~~~  255 (278)
                      +++++|+|+++.+++.....  .| .+.+.+
T Consensus       212 ~~~~~dva~~~~~~~~~~~~~~~g~~~~~~g  242 (246)
T PRK05653        212 LGQPEEVANAVAFLASDAASYITGQVIPVNG  242 (246)
T ss_pred             CcCHHHHHHHHHHHcCchhcCccCCEEEeCC
Confidence            78999999999999865332  34 344444

>PRK07985 oxidoreductase; Provisional

Probab=99.93  E-value=3.4e-24  Score=178.19  Aligned_cols=213  Identities=16%  Similarity=0.125  Sum_probs=151.7

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCC--CcccccCCCCCCCceEEEEccCCChhhHHHHhc----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD--SSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~--~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~----   79 (278)
                      .+++|++|||||+|+||++++++|+++|+ +|++..|+...  .+.+.........++.++.+|++|++++.++++    
T Consensus        46 ~~~~k~vlITGas~gIG~aia~~L~~~G~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~  124 (294)
T PRK07985         46 RLKDRKALVTGGDSGIGRAAAIAYAREGA-DVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHK  124 (294)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            45668999999999999999999999999 78776654321  122221111111267889999999988877764    


Q ss_pred             ---CccEEEEecccCCC-----CCCCCchhhhhhhHHhHHHHHHHHHHhc--CCCEEEEecceeeeecCCCCCCccccCC
Q 023689           80 ---GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDET  149 (278)
Q Consensus        80 ---~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~E~  149 (278)
                         ++|++||+||....     +...++++..+++|+.++..+++++.+.  ..++||++||..++.+.+..        
T Consensus       125 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~~~--------  196 (294)
T PRK07985        125 ALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPHL--------  196 (294)
T ss_pred             HhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCCCCc--------
Confidence               57999999986321     2234567889999999999999988653  23689999998776543332        


Q ss_pred             CCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccccc
Q 023689          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (278)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (278)
                                  ..|+.+|...+.+.+.++.+   +|+++++++||.+.++...... ........+....+      ..
T Consensus       197 ------------~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~-~~~~~~~~~~~~~~------~~  257 (294)
T PRK07985        197 ------------LDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGG-QTQDKIPQFGQQTP------MK  257 (294)
T ss_pred             ------------chhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccC-CCHHHHHHHhccCC------CC
Confidence                        46999999999998888875   5999999999999998642211 11122222222222      23


Q ss_pred             CcccHHHHHHHHHhhhcCCC
Q 023689          227 GAVPVKDVAKAQVLLFESPA  246 (278)
Q Consensus       227 ~~i~~~D~a~~~~~~~~~~~  246 (278)
                      .+..++|+|+++++++....
T Consensus       258 r~~~pedva~~~~fL~s~~~  277 (294)
T PRK07985        258 RAGQPAELAPVYVYLASQES  277 (294)
T ss_pred             CCCCHHHHHHHHHhhhChhc
Confidence            46789999999999987543

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.93  E-value=2.7e-24  Score=177.69  Aligned_cols=228  Identities=17%  Similarity=0.158  Sum_probs=158.1

Q ss_pred             CccccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc
Q 023689            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE   79 (278)
Q Consensus         1 m~~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~   79 (278)
                      |+.+..+++|+++||||+|+||++++++|.++|+ .|+++.|+.+..+.+. .+.... .++.++++|++|++++.++++
T Consensus         2 ~~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~   79 (278)
T PRK08277          2 MPNLFSLKGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAG-GEALAVKADVLDKESLEQARQ   79 (278)
T ss_pred             CCceeccCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CeEEEEECCCCCHHHHHHHHH
Confidence            4455566789999999999999999999999999 8888888754432221 111111 268899999999988887764


Q ss_pred             -------CccEEEEecccCCCC-------------------CCCCchhhhhhhHHhHHHHHHHH----HHhcCCCEEEEe
Q 023689           80 -------GCKGVFHVASPCTLE-------------------DPVDPEKELILPAVQGTLNVLEA----AKRFGVRRVVVT  129 (278)
Q Consensus        80 -------~~d~vi~~a~~~~~~-------------------~~~~~~~~~~~~n~~~~~~ll~~----~~~~~~~~~v~~  129 (278)
                             ++|++||+||.....                   ...++++..+++|+.++..++++    +++.+.+++|++
T Consensus        80 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~i  159 (278)
T PRK08277         80 QILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINI  159 (278)
T ss_pred             HHHHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEE
Confidence                   689999999854321                   11345678899999988765554    445556789999


Q ss_pred             cceeeeecCCCCCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCC---
Q 023689          130 SSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYL---  203 (278)
Q Consensus       130 Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~---  203 (278)
                      ||..++.+.+..                    ..|+.+|.+.+.+.+.++.+.   |+++++++||.+.++......   
T Consensus       160 sS~~~~~~~~~~--------------------~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~  219 (278)
T PRK08277        160 SSMNAFTPLTKV--------------------PAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNE  219 (278)
T ss_pred             ccchhcCCCCCC--------------------chhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccc
Confidence            997775543321                    469999999999998888765   899999999999998533210   


Q ss_pred             -chhHHHHHHHhhCCCCcccccccCcccHHHHHHHHHhhhcC-CC--CCceEEecCc
Q 023689          204 -NASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFES-PA--ASGRYLCTNG  256 (278)
Q Consensus       204 -~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~-~~--~~~~~~~~~~  256 (278)
                       ..............|      ...+..++|+|+++++++.. ..  ..|..+..++
T Consensus       220 ~~~~~~~~~~~~~~~p------~~r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdg  270 (278)
T PRK08277        220 DGSLTERANKILAHTP------MGRFGKPEELLGTLLWLADEKASSFVTGVVLPVDG  270 (278)
T ss_pred             cccchhHHHHHhccCC------ccCCCCHHHHHHHHHHHcCccccCCcCCCEEEECC
Confidence             001111122222222      34567899999999998865 32  2455443333

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.93  E-value=2.5e-24  Score=178.54  Aligned_cols=203  Identities=18%  Similarity=0.223  Sum_probs=147.3

Q ss_pred             eEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHh------cC-ccE
Q 023689           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAV------EG-CKG   83 (278)
Q Consensus        11 ~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~------~~-~d~   83 (278)
                      +||||||||++|++++++|++.|+ +|++++|+++....         .+++.+.+|+.|++++.+++      ++ +|.
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~-~V~~~~R~~~~~~~---------~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~   70 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASV-PFLVASRSSSSSAG---------PNEKHVKFDWLDEDTWDNPFSSDDGMEPEISA   70 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCC-cEEEEeCCCccccC---------CCCccccccCCCHHHHHHHHhcccCcCCceeE
Confidence            589999999999999999999999 89999998764321         16677889999999999998      57 999


Q ss_pred             EEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCch
Q 023689           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW  163 (278)
Q Consensus        84 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  163 (278)
                      |+|+++...     +.        .....+++++|++.|+++||++||.....+.                         
T Consensus        71 v~~~~~~~~-----~~--------~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~~-------------------------  112 (285)
T TIGR03649        71 VYLVAPPIP-----DL--------APPMIKFIDFARSKGVRRFVLLSASIIEKGG-------------------------  112 (285)
T ss_pred             EEEeCCCCC-----Ch--------hHHHHHHHHHHHHcCCCEEEEeeccccCCCC-------------------------
Confidence            999976421     11        2245689999999999999999974432110                         


Q ss_pred             hhhHHHHHHHHHHHHHHh-cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCc--ccccccCcccHHHHHHHHHh
Q 023689          164 YPVSKTLAEKAAWEFAEK-HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT--QEYHWLGAVPVKDVAKAQVL  240 (278)
Q Consensus       164 y~~sK~~~e~~~~~~~~~-~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~D~a~~~~~  240 (278)
                        ..+...|+.++    + .|++++++||+.++.+.....      ..........+.  .++...++|+++|+|++++.
T Consensus       113 --~~~~~~~~~l~----~~~gi~~tilRp~~f~~~~~~~~------~~~~~~~~~~~~~~~g~~~~~~v~~~Dva~~~~~  180 (285)
T TIGR03649       113 --PAMGQVHAHLD----SLGGVEYTVLRPTWFMENFSEEF------HVEAIRKENKIYSATGDGKIPFVSADDIARVAYR  180 (285)
T ss_pred             --chHHHHHHHHH----hccCCCEEEEeccHHhhhhcccc------cccccccCCeEEecCCCCccCcccHHHHHHHHHH
Confidence              01112233332    4 499999999999886542111      011111212222  24578999999999999999


Q ss_pred             hhcCCCCC-ceE-EecCccccHHHHHHHHHHhCCC
Q 023689          241 LFESPAAS-GRY-LCTNGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       241 ~~~~~~~~-~~~-~~~~~~~s~~e~~~~i~~~~~~  273 (278)
                      ++.++... +.| +++++.+|+.|+++.+.+.+++
T Consensus       181 ~l~~~~~~~~~~~l~g~~~~s~~eia~~l~~~~g~  215 (285)
T TIGR03649       181 ALTDKVAPNTDYVVLGPELLTYDDVAEILSRVLGR  215 (285)
T ss_pred             HhcCCCcCCCeEEeeCCccCCHHHHHHHHHHHhCC
Confidence            99876543 456 5567899999999999999864

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.93  E-value=2.4e-24  Score=174.16  Aligned_cols=211  Identities=16%  Similarity=0.119  Sum_probs=154.9

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc---
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE---   79 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---   79 (278)
                      |+.+++++++||||+|+||++++++|+++|+ .|+++.|++...+... .+.... .++.++.+|+++++++.++++   
T Consensus         2 ~~~~~~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~   79 (239)
T PRK07666          2 AQSLQGKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYG-VKVVIATADVSDYEEVTAAIEQLK   79 (239)
T ss_pred             CccCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhC-CeEEEEECCCCCHHHHHHHHHHHH
Confidence            4456678999999999999999999999999 8999998765432221 111111 278899999999999888876   


Q ss_pred             ----CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHH----hcCCCEEEEecceeeeecCCCCCCcccc
Q 023689           80 ----GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFD  147 (278)
Q Consensus        80 ----~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~  147 (278)
                          ++|+|||+||.....    ...+++++.+++|+.++.++++++.    +.+.+++|++||..++++.+..      
T Consensus        80 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~------  153 (239)
T PRK07666         80 NELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAVT------  153 (239)
T ss_pred             HHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCCC------
Confidence                689999999875432    1224557889999999998888775    3456789999997776554332      


Q ss_pred             CCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccc
Q 023689          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (278)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (278)
                                    ..|+.+|.+.+.+++.++.+   .|++++++|||.+.++.....         ....+.       
T Consensus       154 --------------~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~---------~~~~~~-------  203 (239)
T PRK07666        154 --------------SAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDL---------GLTDGN-------  203 (239)
T ss_pred             --------------cchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhc---------cccccC-------
Confidence                          46999999988888777643   599999999999988753221         000111       


Q ss_pred             ccCcccHHHHHHHHHhhhcCCCCCceEEec
Q 023689          225 WLGAVPVKDVAKAQVLLFESPAASGRYLCT  254 (278)
Q Consensus       225 ~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~  254 (278)
                      ...++.++|+|+.++.+++++  .+.++-+
T Consensus       204 ~~~~~~~~~~a~~~~~~l~~~--~~~~~~~  231 (239)
T PRK07666        204 PDKVMQPEDLAEFIVAQLKLN--KRTFIKS  231 (239)
T ss_pred             CCCCCCHHHHHHHHHHHHhCC--CceEEEE
Confidence            234688999999999999875  3345433

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.93  E-value=4.6e-24  Score=174.65  Aligned_cols=213  Identities=18%  Similarity=0.175  Sum_probs=152.3

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc----
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~----   79 (278)
                      |..+++|++|||||+|+||++++++|.++|+ .|++..|+.+..+.+....  . .++.++++|++|++++.++++    
T Consensus         1 m~~~~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~--~-~~~~~~~~Dl~~~~~~~~~~~~~~~   76 (261)
T PRK08265          1 MIGLAGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASL--G-ERARFIATDITDDAAIERAVATVVA   76 (261)
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh--C-CeeEEEEecCCCHHHHHHHHHHHHH
Confidence            4456779999999999999999999999999 8998888765433322211  1 168899999999998887765    


Q ss_pred             ---CccEEEEecccCCC---CCCCCchhhhhhhHHhHHHHHHHHHHh---cCCCEEEEecceeeeecCCCCCCccccCCC
Q 023689           80 ---GCKGVFHVASPCTL---EDPVDPEKELILPAVQGTLNVLEAAKR---FGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (278)
Q Consensus        80 ---~~d~vi~~a~~~~~---~~~~~~~~~~~~~n~~~~~~ll~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~  150 (278)
                         .+|++||+||....   ....+.++..+++|+.++..+++++..   .+.+++|++||.++..+.++.         
T Consensus        77 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~---------  147 (261)
T PRK08265         77 RFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQTGR---------  147 (261)
T ss_pred             HhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCC---------
Confidence               57999999986432   223446778899999999988887643   334689999998776654432         


Q ss_pred             CCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccC
Q 023689          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (278)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (278)
                                 ..|+.+|...+.+.+.++.+   +|+++++++||.+.++....................   .  ....
T Consensus       148 -----------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~---~--p~~r  211 (261)
T PRK08265        148 -----------WLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAPF---H--LLGR  211 (261)
T ss_pred             -----------chhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhhccc---C--CCCC
Confidence                       46999999999888888765   489999999999887753221110011111111100   0  1234


Q ss_pred             cccHHHHHHHHHhhhcCC
Q 023689          228 AVPVKDVAKAQVLLFESP  245 (278)
Q Consensus       228 ~i~~~D~a~~~~~~~~~~  245 (278)
                      +..++|+|+++.+++...
T Consensus       212 ~~~p~dva~~~~~l~s~~  229 (261)
T PRK08265        212 VGDPEEVAQVVAFLCSDA  229 (261)
T ss_pred             ccCHHHHHHHHHHHcCcc
Confidence            578999999999998754

>PLN02253 xanthoxin dehydrogenase

Probab=99.93  E-value=4.7e-24  Score=176.46  Aligned_cols=213  Identities=19%  Similarity=0.153  Sum_probs=151.2

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc------
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~------   79 (278)
                      .+++|++|||||+|+||++++++|+++|+ .|++..|+.+..+.+....... .+++++++|++|++++.++++      
T Consensus        15 ~l~~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~~~~~~~   92 (280)
T PLN02253         15 RLLGKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQDDLGQNVCDSLGGE-PNVCFFHCDVTVEDDVSRAVDFTVDKF   92 (280)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCC-CceEEEEeecCCHHHHHHHHHHHHHHh
Confidence            44578999999999999999999999999 8888887654332222111111 268899999999999988876      


Q ss_pred             -CccEEEEecccCCC------CCCCCchhhhhhhHHhHHHHHHHHHHh----cCCCEEEEecceeeeecCCCCCCccccC
Q 023689           80 -GCKGVFHVASPCTL------EDPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (278)
Q Consensus        80 -~~d~vi~~a~~~~~------~~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~E  148 (278)
                       ++|+|||+||....      +...++++..+++|+.++.++++++.+    .+.+++|++||..+.++.+..       
T Consensus        93 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~-------  165 (280)
T PLN02253         93 GTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGP-------  165 (280)
T ss_pred             CCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCCC-------
Confidence             58999999987432      112345688999999999998887753    334689999987776554332       


Q ss_pred             CCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCc---hhHHHHH---HHhh-CCC
Q 023689          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLN---ASCAVLQ---QLLQ-GSK  218 (278)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~---~~~~~~~---~~~~-~~~  218 (278)
                                   ..|+.+|.+.+.+.+.++.+.   |+++++++||.+.++.......   .....+.   .... +.+
T Consensus       166 -------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (280)
T PLN02253        166 -------------HAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNAN  232 (280)
T ss_pred             -------------cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCC
Confidence                         469999999999999888754   8999999999998875321100   0011111   1111 111


Q ss_pred             CcccccccCcccHHHHHHHHHhhhcCC
Q 023689          219 DTQEYHWLGAVPVKDVAKAQVLLFESP  245 (278)
Q Consensus       219 ~~~~~~~~~~i~~~D~a~~~~~~~~~~  245 (278)
                      .     ....++++|+|+++++++...
T Consensus       233 l-----~~~~~~~~dva~~~~~l~s~~  254 (280)
T PLN02253        233 L-----KGVELTVDDVANAVLFLASDE  254 (280)
T ss_pred             C-----cCCCCCHHHHHHHHHhhcCcc
Confidence            1     123478999999999998653

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.93  E-value=2.7e-24  Score=174.97  Aligned_cols=210  Identities=19%  Similarity=0.189  Sum_probs=151.4

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCCCCCCceEEEEccCCChhhHHHHhc-------
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------   79 (278)
                      ++|++|||||+|+||++++++|+++|+ .|++..|+.+....+.. +..... ++.++++|++|.++++++++       
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~   79 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNREAAEKVAADIRAKGG-NAQAFACDITDRDSVDTAVAAAEQALG   79 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            468999999999999999999999999 88888887654332211 111111 68899999999998888775       


Q ss_pred             CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHH----hcCCCEEEEecceeeeecCCCCCCccccCCCC
Q 023689           80 GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (278)
Q Consensus        80 ~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~  151 (278)
                      ++|+|||+|+.....    ...+.++..+++|+.++.++++++.    +.+.+++|++||..++.+.+..          
T Consensus        80 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~~----------  149 (250)
T TIGR03206        80 PVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSGE----------  149 (250)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCCC----------
Confidence            579999999864321    1223456789999999998888764    4567899999997776554332          


Q ss_pred             CchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCC---chhHHHHHHHhhCCCCcccccc
Q 023689          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYL---NASCAVLQQLLQGSKDTQEYHW  225 (278)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~  225 (278)
                                ..|+.+|.+.+.+.+.++++.   +++++++|||.++++......   .....+...+....+      .
T Consensus       150 ----------~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~  213 (250)
T TIGR03206       150 ----------AVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIP------L  213 (250)
T ss_pred             ----------chHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCC------c
Confidence                      469999999988888887654   899999999999988532210   011112222222222      2


Q ss_pred             cCcccHHHHHHHHHhhhcCC
Q 023689          226 LGAVPVKDVAKAQVLLFESP  245 (278)
Q Consensus       226 ~~~i~~~D~a~~~~~~~~~~  245 (278)
                      ..+..++|+|+++..++...
T Consensus       214 ~~~~~~~dva~~~~~l~~~~  233 (250)
T TIGR03206       214 GRLGQPDDLPGAILFFSSDD  233 (250)
T ss_pred             cCCcCHHHHHHHHHHHcCcc
Confidence            33568899999999988754

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.93  E-value=3.3e-24  Score=175.87  Aligned_cols=211  Identities=21%  Similarity=0.199  Sum_probs=149.8

Q ss_pred             cccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         5 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      ..+++|++|||||+|+||++++++|+++|+ .|+++.|+.+..+.+..... .. ++.++.+|++|++++.++++     
T Consensus         7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~~~~~~~~~~~~   83 (264)
T PRK12829          7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGA-RVHVCDVSEAALAATAARLP-GA-KVTATVADVADPAQVERVFDTAVER   83 (264)
T ss_pred             hccCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHh-cC-ceEEEEccCCCHHHHHHHHHHHHHH
Confidence            345678999999999999999999999999 89999987654333221111 11 56889999999998887765     


Q ss_pred             --CccEEEEecccCCC-----CCCCCchhhhhhhHHhHHHHHHHHHH----hcCC-CEEEEecceeeeecCCCCCCcccc
Q 023689           80 --GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAK----RFGV-RRVVVTSSISAIVPNPGWKGKVFD  147 (278)
Q Consensus        80 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~-~~~v~~Ss~~~~~~~~~~~~~~~~  147 (278)
                        ++|+|||+|+....     ....+.+...+++|+.++.++++++.    +.+. +.++++||.++..+.+..      
T Consensus        84 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~~------  157 (264)
T PRK12829         84 FGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPGR------  157 (264)
T ss_pred             hCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCCC------
Confidence              68999999987522     11234568889999999999888773    3344 568888876654443321      


Q ss_pred             CCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCch--------hHHHHHHHhhC
Q 023689          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNA--------SCAVLQQLLQG  216 (278)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~--------~~~~~~~~~~~  216 (278)
                                    ..|+.+|...+.+++.++.+   .+++++++|||.++|+........        ...........
T Consensus       158 --------------~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (264)
T PRK12829        158 --------------TPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEK  223 (264)
T ss_pred             --------------chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHhc
Confidence                          46999999999998888764   389999999999999864321100        00000111111


Q ss_pred             CCCcccccccCcccHHHHHHHHHhhhcC
Q 023689          217 SKDTQEYHWLGAVPVKDVAKAQVLLFES  244 (278)
Q Consensus       217 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~  244 (278)
                      .      ....+++++|+|+++..++..
T Consensus       224 ~------~~~~~~~~~d~a~~~~~l~~~  245 (264)
T PRK12829        224 I------SLGRMVEPEDIAATALFLASP  245 (264)
T ss_pred             C------CCCCCCCHHHHHHHHHHHcCc
Confidence            1      134689999999999888754

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.93  E-value=4.3e-24  Score=174.59  Aligned_cols=226  Identities=17%  Similarity=0.140  Sum_probs=155.5

Q ss_pred             ccccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCC-CCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc
Q 023689            2 ASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG-SDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE   79 (278)
Q Consensus         2 ~~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~-~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~   79 (278)
                      |.|+...+|++|||||+|+||++++++|.++|+ .|++..++. +..+.+. .+.... .++.++.+|++|.+++.++++
T Consensus         2 ~~~~~~~~k~vlItGas~giG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~   79 (258)
T PRK09134          2 PPMSMAAPRAALVTGAARRIGRAIALDLAAHGF-DVAVHYNRSRDEAEALAAEIRALG-RRAVALQADLADEAEVRALVA   79 (258)
T ss_pred             CCCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcC-CeEEEEEcCCCCHHHHHHHHH
Confidence            345566788999999999999999999999999 776665533 2222111 111111 268899999999998888765


Q ss_pred             -------CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHHHhc----CCCEEEEecceeeeecCCCCCCc
Q 023689           80 -------GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKRF----GVRRVVVTSSISAIVPNPGWKGK  144 (278)
Q Consensus        80 -------~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~----~~~~~v~~Ss~~~~~~~~~~~~~  144 (278)
                             ++|+|||+||....    +...+.++..+++|+.++.++++++.+.    +.+++|++||...+.+.+.    
T Consensus        80 ~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p~----  155 (258)
T PRK09134         80 RASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNPD----  155 (258)
T ss_pred             HHHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCCC----
Confidence                   47999999986443    2233456888999999999999987553    3457888877544322221    


Q ss_pred             cccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc--CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccc
Q 023689          145 VFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQE  222 (278)
Q Consensus       145 ~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (278)
                                      ...|+.+|...+.+.+.++++.  ++++++++||.+.+.....    . ..........+    
T Consensus       156 ----------------~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~~----~-~~~~~~~~~~~----  210 (258)
T PRK09134        156 ----------------FLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQS----P-EDFARQHAATP----  210 (258)
T ss_pred             ----------------chHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCcccC----h-HHHHHHHhcCC----
Confidence                            1469999999999999988754  4999999999988754221    1 11122222222    


Q ss_pred             ccccCcccHHHHHHHHHhhhcCCCCCce-EEecC-ccccH
Q 023689          223 YHWLGAVPVKDVAKAQVLLFESPAASGR-YLCTN-GIYQF  260 (278)
Q Consensus       223 ~~~~~~i~~~D~a~~~~~~~~~~~~~~~-~~~~~-~~~s~  260 (278)
                        .....+++|+|++++.+++++...|. +.+.+ ..++|
T Consensus       211 --~~~~~~~~d~a~~~~~~~~~~~~~g~~~~i~gg~~~~~  248 (258)
T PRK09134        211 --LGRGSTPEEIAAAVRYLLDAPSVTGQMIAVDGGQHLAW  248 (258)
T ss_pred             --CCCCcCHHHHHHHHHHHhcCCCcCCCEEEECCCeeccc
Confidence              12357899999999999987666664 44443 33443

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.93  E-value=5.4e-24  Score=173.71  Aligned_cols=216  Identities=20%  Similarity=0.127  Sum_probs=156.7

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc------
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~------   79 (278)
                      ++++|++|||||+|+||++++++|.++|+ .|++..|+............   ..+..+.+|+++++++.++++      
T Consensus        12 ~~~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~~~   87 (255)
T PRK06841         12 DLSGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQLLG---GNAKGLVCDVSDSQSVEAAVAAVISAF   87 (255)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhhC---CceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            45678999999999999999999999999 89888887643222222211   157789999999998888765      


Q ss_pred             -CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHh----cCCCEEEEecceeeeecCCCCCCccccCCC
Q 023689           80 -GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (278)
Q Consensus        80 -~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~  150 (278)
                       ++|+|||+||.....    ...+.++..+++|+.++.++++++..    .+.++||++||..+.++.+..         
T Consensus        88 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~---------  158 (255)
T PRK06841         88 GRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERH---------  158 (255)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCCC---------
Confidence             579999999875432    12345577899999999999988754    456799999997776554332         


Q ss_pred             CCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccC
Q 023689          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (278)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (278)
                                 ..|+.+|.+.+.+.+.++.+   .|++++.++||.+.++.......  .........+.+      ...
T Consensus       159 -----------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~--~~~~~~~~~~~~------~~~  219 (255)
T PRK06841        159 -----------VAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWA--GEKGERAKKLIP------AGR  219 (255)
T ss_pred             -----------chHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccc--hhHHHHHHhcCC------CCC
Confidence                       46999999998888888765   48999999999998886432211  111112222222      346


Q ss_pred             cccHHHHHHHHHhhhcCCCC--CceEEe
Q 023689          228 AVPVKDVAKAQVLLFESPAA--SGRYLC  253 (278)
Q Consensus       228 ~i~~~D~a~~~~~~~~~~~~--~~~~~~  253 (278)
                      +.+++|+|+++++++.....  .|..+.
T Consensus       220 ~~~~~~va~~~~~l~~~~~~~~~G~~i~  247 (255)
T PRK06841        220 FAYPEEIAAAALFLASDAAAMITGENLV  247 (255)
T ss_pred             CcCHHHHHHHHHHHcCccccCccCCEEE
Confidence            78999999999999876433  465543

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.92  E-value=3.8e-24  Score=175.11  Aligned_cols=226  Identities=19%  Similarity=0.157  Sum_probs=156.9

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCC-CCCceEEEEccCCChhhHHHHhc--
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGA-GDANLRVFEADVLDSGAVSRAVE--   79 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~-~~~~v~~~~~Dl~d~~~~~~~~~--   79 (278)
                      |..+++|++|||||+|+||++++++|+++|+ .|++..|+.+..+... .+... ...++.++++|++|++++.++++  
T Consensus         2 ~~~l~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   80 (260)
T PRK07063          2 MNRLAGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAA   80 (260)
T ss_pred             CcccCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHH
Confidence            3456789999999999999999999999999 8888888665433322 11110 11268899999999998888775  


Q ss_pred             -----CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHHH----hcCCCEEEEecceeeeecCCCCCCccc
Q 023689           80 -----GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVF  146 (278)
Q Consensus        80 -----~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~  146 (278)
                           .+|++||+||....    ....++++..+++|+.++..+++++.    +++.+++|++||..+..+.+..     
T Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----  155 (260)
T PRK07063         81 EEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGC-----  155 (260)
T ss_pred             HHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCCc-----
Confidence                 58999999986433    12335678889999999988888764    3456789999997665443321     


Q ss_pred             cCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCc---hhHHHHHHHhhCCCCc
Q 023689          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN---ASCAVLQQLLQGSKDT  220 (278)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~---~~~~~~~~~~~~~~~~  220 (278)
                                     ..|+.+|.+.+.+.+.++.+   +|+++++++||.+-++.......   .............|  
T Consensus       156 ---------------~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--  218 (260)
T PRK07063        156 ---------------FPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQP--  218 (260)
T ss_pred             ---------------hHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCC--
Confidence                           46999999999888888765   38999999999998875322100   00111111111111  


Q ss_pred             ccccccCcccHHHHHHHHHhhhcCCC--CCceEEecCc
Q 023689          221 QEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLCTNG  256 (278)
Q Consensus       221 ~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~~  256 (278)
                          ...+..++|+|.++++++....  ..|..+..++
T Consensus       219 ----~~r~~~~~~va~~~~fl~s~~~~~itG~~i~vdg  252 (260)
T PRK07063        219 ----MKRIGRPEEVAMTAVFLASDEAPFINATCITIDG  252 (260)
T ss_pred             ----CCCCCCHHHHHHHHHHHcCccccccCCcEEEECC
Confidence                2346689999999999987543  3455443333

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.92  E-value=1.5e-23  Score=170.87  Aligned_cols=204  Identities=19%  Similarity=0.135  Sum_probs=150.8

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc------
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~------   79 (278)
                      .+++|++|||||+|+||+.++++|+++|+ +|++..|+.     ....   . .++.++++|++|++++.++++      
T Consensus         5 ~~~~k~vlItGas~~iG~~la~~l~~~G~-~v~~~~~~~-----~~~~---~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   74 (252)
T PRK08220          5 DFSGKTVWVTGAAQGIGYAVALAFVEAGA-KVIGFDQAF-----LTQE---D-YPFATFVLDVSDAAAVAQVCQRLLAET   74 (252)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecch-----hhhc---C-CceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            46678999999999999999999999999 888888865     1111   1 178899999999999988876      


Q ss_pred             -CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHH----hcCCCEEEEecceeeeecCCCCCCccccCCC
Q 023689           80 -GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (278)
Q Consensus        80 -~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~  150 (278)
                       ++|+|||+|+.....    ...+++...+++|+.++..+++++.    +.+.+++|++||..+..+.+.          
T Consensus        75 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~----------  144 (252)
T PRK08220         75 GPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIG----------  144 (252)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCC----------
Confidence             379999999875432    1234667889999999999988874    345578999998665433222          


Q ss_pred             CCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCch-------hHHHHHHHhhCCCCc
Q 023689          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNA-------SCAVLQQLLQGSKDT  220 (278)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~-------~~~~~~~~~~~~~~~  220 (278)
                                ...|+.+|...+.+.+.++.+   +++++++++||.++++........       ..........+.   
T Consensus       145 ----------~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  211 (252)
T PRK08220        145 ----------MAAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGI---  211 (252)
T ss_pred             ----------CchhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcC---
Confidence                      157999999999998888865   699999999999999864321000       000111111221   


Q ss_pred             ccccccCcccHHHHHHHHHhhhcCC
Q 023689          221 QEYHWLGAVPVKDVAKAQVLLFESP  245 (278)
Q Consensus       221 ~~~~~~~~i~~~D~a~~~~~~~~~~  245 (278)
                         ....+++++|+|+++++++...
T Consensus       212 ---~~~~~~~~~dva~~~~~l~~~~  233 (252)
T PRK08220        212 ---PLGKIARPQEIANAVLFLASDL  233 (252)
T ss_pred             ---CCcccCCHHHHHHHHHHHhcch
Confidence               2456899999999999988653

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.92  E-value=4.8e-24  Score=173.95  Aligned_cols=213  Identities=17%  Similarity=0.159  Sum_probs=150.4

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc---
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE---   79 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---   79 (278)
                      |+++++|++|||||+|+||.+++++|.++|+ .|+++.|+++..+.+. .+.... .++.++.+|++|++++.++++   
T Consensus         1 ~~~~~~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~   78 (254)
T PRK07478          1 MMRLNGKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEG-GEAVALAGDVRDEAYAKALVALAV   78 (254)
T ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHH
Confidence            3456678999999999999999999999999 8888888765443322 111111 268899999999998888775   


Q ss_pred             ----CccEEEEecccCCC-----CCCCCchhhhhhhHHhHHHHHHH----HHHhcCCCEEEEecceeeee-cCCCCCCcc
Q 023689           80 ----GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLE----AAKRFGVRRVVVTSSISAIV-PNPGWKGKV  145 (278)
Q Consensus        80 ----~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~----~~~~~~~~~~v~~Ss~~~~~-~~~~~~~~~  145 (278)
                          ++|++||+||....     +...++++..+++|+.++..+.+    .+++.+.+++|++||..++. +.+.     
T Consensus        79 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~-----  153 (254)
T PRK07478         79 ERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPG-----  153 (254)
T ss_pred             HhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCCCC-----
Confidence                57999999987432     12234568889999987776655    44556667899999866542 2221     


Q ss_pred             ccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccc
Q 023689          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQE  222 (278)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (278)
                                     ...|+.+|.+.+.+.+.++.+.   |+++++++||.+.++....... .... ........    
T Consensus       154 ---------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-~~~~-~~~~~~~~----  212 (254)
T PRK07478        154 ---------------MAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGD-TPEA-LAFVAGLH----  212 (254)
T ss_pred             ---------------cchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccC-CHHH-HHHHHhcC----
Confidence                           2579999999999998888754   7999999999998884332211 1111 11111111    


Q ss_pred             ccccCcccHHHHHHHHHhhhcCC
Q 023689          223 YHWLGAVPVKDVAKAQVLLFESP  245 (278)
Q Consensus       223 ~~~~~~i~~~D~a~~~~~~~~~~  245 (278)
                       ....+..++|+|+.+++++.+.
T Consensus       213 -~~~~~~~~~~va~~~~~l~s~~  234 (254)
T PRK07478        213 -ALKRMAQPEEIAQAALFLASDA  234 (254)
T ss_pred             -CCCCCcCHHHHHHHHHHHcCch
Confidence             1234678999999999988654

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.9e-23  Score=170.20  Aligned_cols=212  Identities=18%  Similarity=0.133  Sum_probs=154.0

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc------
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~------   79 (278)
                      .+++|++|||||+|+||++++++|.++|+ .|+++.|+.+..  .      ...+++++++|++|++++.++++      
T Consensus         3 ~~~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~~--~------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   73 (252)
T PRK07856          3 DLTGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPET--V------DGRPAEFHAADVRDPDQVAALVDAIVERH   73 (252)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhhh--h------cCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            46789999999999999999999999999 888888876431  0      11178899999999998888775      


Q ss_pred             -CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHh----c-CCCEEEEecceeeeecCCCCCCccccCC
Q 023689           80 -GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----F-GVRRVVVTSSISAIVPNPGWKGKVFDET  149 (278)
Q Consensus        80 -~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~----~-~~~~~v~~Ss~~~~~~~~~~~~~~~~E~  149 (278)
                       ++|+|||+||.....    ...+.++..+++|+.++..+++++.+    + +.++||++||..+..+.+..        
T Consensus        74 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~--------  145 (252)
T PRK07856         74 GRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGT--------  145 (252)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCCC--------
Confidence             459999999865431    22345678899999999999998754    2 34689999997776544332        


Q ss_pred             CCCchhhhhccCchhhhHHHHHHHHHHHHHHhc--CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccC
Q 023689          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (278)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (278)
                                  ..|+.+|...+.+.+.++.+.  .++++.++||.+.++........ ...........|      ...
T Consensus       146 ------------~~Y~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~------~~~  206 (252)
T PRK07856        146 ------------AAYGAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHYGD-AEGIAAVAATVP------LGR  206 (252)
T ss_pred             ------------chhHHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhhccC-HHHHHHHhhcCC------CCC
Confidence                        579999999999999888754  38999999999988853321111 111122222222      234


Q ss_pred             cccHHHHHHHHHhhhcCCC--CCceEEe
Q 023689          228 AVPVKDVAKAQVLLFESPA--ASGRYLC  253 (278)
Q Consensus       228 ~i~~~D~a~~~~~~~~~~~--~~~~~~~  253 (278)
                      +..++|+|+++++++....  ..|..+.
T Consensus       207 ~~~p~~va~~~~~L~~~~~~~i~G~~i~  234 (252)
T PRK07856        207 LATPADIAWACLFLASDLASYVSGANLE  234 (252)
T ss_pred             CcCHHHHHHHHHHHcCcccCCccCCEEE
Confidence            5789999999999886533  2455433

>PRK05717 oxidoreductase; Validated

Probab=99.92  E-value=9.1e-24  Score=172.37  Aligned_cols=208  Identities=16%  Similarity=0.097  Sum_probs=150.6

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc------
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~------   79 (278)
                      .+++|++|||||+|+||++++++|+++|+ .|+++.|+...........  . .++.++++|++|.+++.++++      
T Consensus         7 ~~~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~--~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~   82 (255)
T PRK05717          7 GHNGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKAL--G-ENAWFIAMDVADEAQVAAGVAEVLGQF   82 (255)
T ss_pred             ccCCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHc--C-CceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            45689999999999999999999999999 8888877654332221111  1 168899999999988876654      


Q ss_pred             -CccEEEEecccCCCC------CCCCchhhhhhhHHhHHHHHHHHHHhc---CCCEEEEecceeeeecCCCCCCccccCC
Q 023689           80 -GCKGVFHVASPCTLE------DPVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKVFDET  149 (278)
Q Consensus        80 -~~d~vi~~a~~~~~~------~~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~v~~Ss~~~~~~~~~~~~~~~~E~  149 (278)
                       ++|++||+||.....      ...++++..+++|+.++.++++++.+.   ..+++|++||..+.++.+..        
T Consensus        83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~~~~--------  154 (255)
T PRK05717         83 GRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSEPDT--------  154 (255)
T ss_pred             CCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCCCCC--------
Confidence             479999999875421      123456789999999999999998542   23689999997776554332        


Q ss_pred             CCCchhhhhccCchhhhHHHHHHHHHHHHHHhc--CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccC
Q 023689          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (278)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (278)
                                  ..|+.+|.+.+.+.+.++.+.  ++++++++||.+.++......  .... ........   +  ...
T Consensus       155 ------------~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~~--~~~~-~~~~~~~~---~--~~~  214 (255)
T PRK05717        155 ------------EAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQRR--AEPL-SEADHAQH---P--AGR  214 (255)
T ss_pred             ------------cchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCcccccc--chHH-HHHHhhcC---C--CCC
Confidence                        569999999999999988775  599999999999998633221  1111 11111111   1  235


Q ss_pred             cccHHHHHHHHHhhhcCC
Q 023689          228 AVPVKDVAKAQVLLFESP  245 (278)
Q Consensus       228 ~i~~~D~a~~~~~~~~~~  245 (278)
                      +.+++|+|.++.+++...
T Consensus       215 ~~~~~~va~~~~~l~~~~  232 (255)
T PRK05717        215 VGTVEDVAAMVAWLLSRQ  232 (255)
T ss_pred             CcCHHHHHHHHHHHcCch
Confidence            679999999999888653

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.92  E-value=1.1e-23  Score=172.03  Aligned_cols=217  Identities=20%  Similarity=0.225  Sum_probs=153.5

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCC-cc-cccCCCCCCCceEEEEccCCChhhHHHHhc-------C
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-SH-LFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~-~~-~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~   80 (278)
                      |++|||||+|+||++++++|.++|+ +|+++.|+.... .. ...+.... .++.++++|++|++++.++++       .
T Consensus         3 k~vlItG~sg~iG~~la~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (256)
T PRK12745          3 PVALVTGGRRGIGLGIARALAAAGF-DLAINDRPDDEELAATQQELRALG-VEVIFFPADVADLSAHEAMLDAAQAAWGR   80 (256)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHhcC-CceEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            6899999999999999999999999 888888764321 11 11111111 278899999999988877765       5


Q ss_pred             ccEEEEecccCCC------CCCCCchhhhhhhHHhHHHHHHHHHHhc-----C-----CCEEEEecceeeeecCCCCCCc
Q 023689           81 CKGVFHVASPCTL------EDPVDPEKELILPAVQGTLNVLEAAKRF-----G-----VRRVVVTSSISAIVPNPGWKGK  144 (278)
Q Consensus        81 ~d~vi~~a~~~~~------~~~~~~~~~~~~~n~~~~~~ll~~~~~~-----~-----~~~~v~~Ss~~~~~~~~~~~~~  144 (278)
                      +|+|||+||....      ....+.++..+++|+.++.++++++.+.     +     .++||++||..+.++....   
T Consensus        81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~---  157 (256)
T PRK12745         81 IDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNR---  157 (256)
T ss_pred             CCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCCC---
Confidence            7999999986432      1123566788999999999998887432     1     4679999997776554321   


Q ss_pred             cccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcc
Q 023689          145 VFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ  221 (278)
Q Consensus       145 ~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~  221 (278)
                                       +.|+.+|.+.+.+.+.++.+   +|+++++++||.+.++......   .........+..   
T Consensus       158 -----------------~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~---~~~~~~~~~~~~---  214 (256)
T PRK12745        158 -----------------GEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVT---AKYDALIAKGLV---  214 (256)
T ss_pred             -----------------cccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccc---hhHHhhhhhcCC---
Confidence                             57999999999999988864   6899999999999987643321   111122212111   


Q ss_pred             cccccCcccHHHHHHHHHhhhcCCC--CCc-eEEecCc
Q 023689          222 EYHWLGAVPVKDVAKAQVLLFESPA--ASG-RYLCTNG  256 (278)
Q Consensus       222 ~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  256 (278)
                        ....+.+++|+++++..++....  ..| .|.+.++
T Consensus       215 --~~~~~~~~~d~a~~i~~l~~~~~~~~~G~~~~i~gg  250 (256)
T PRK12745        215 --PMPRWGEPEDVARAVAALASGDLPYSTGQAIHVDGG  250 (256)
T ss_pred             --CcCCCcCHHHHHHHHHHHhCCcccccCCCEEEECCC
Confidence              13467899999999998876542  234 4555543

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.92  E-value=2e-24  Score=176.61  Aligned_cols=210  Identities=16%  Similarity=0.161  Sum_probs=151.1

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCCCCCCceEEEEccCCChhhHHHHhc------
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE------   79 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~------   79 (278)
                      +++|++|||||+|+||++++++|+++|+ .|++..|++...+.+.. +.... .++.++.+|++|++++.++++      
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLG-RRALAVPTDITDEDQCANLVALALERF   80 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhC-CceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            3468999999999999999999999999 88888887644332221 11111 268899999999998877764      


Q ss_pred             -CccEEEEecccCCC-----CCCCCchhhhhhhHHhHHHHHHHHHHhc---CCCEEEEecceeeeecCCCCCCccccCCC
Q 023689           80 -GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (278)
Q Consensus        80 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~  150 (278)
                       ++|+|||+|+....     +...+++...+++|+.++..+++++.+.   ..++||++||..+..+.+.          
T Consensus        81 g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~----------  150 (258)
T PRK07890         81 GRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHSQPK----------  150 (258)
T ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccCCCC----------
Confidence             57999999986432     2233566888999999999999988642   2358999999766544322          


Q ss_pred             CCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCc--------hhHHHHHHHhhCCCC
Q 023689          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN--------ASCAVLQQLLQGSKD  219 (278)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~--------~~~~~~~~~~~~~~~  219 (278)
                                ...|+.+|.+.+.+++.++.+   .++++++++||.++|+.......        .............  
T Consensus       151 ----------~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  218 (258)
T PRK07890        151 ----------YGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANS--  218 (258)
T ss_pred             ----------cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcC--
Confidence                      157999999999999988864   48999999999999986322100        0011111111111  


Q ss_pred             cccccccCcccHHHHHHHHHhhhcC
Q 023689          220 TQEYHWLGAVPVKDVAKAQVLLFES  244 (278)
Q Consensus       220 ~~~~~~~~~i~~~D~a~~~~~~~~~  244 (278)
                          ....+.+++|+|++++.++..
T Consensus       219 ----~~~~~~~~~dva~a~~~l~~~  239 (258)
T PRK07890        219 ----DLKRLPTDDEVASAVLFLASD  239 (258)
T ss_pred             ----CccccCCHHHHHHHHHHHcCH
Confidence                123477899999999998875

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.92  E-value=7.1e-24  Score=173.13  Aligned_cols=221  Identities=19%  Similarity=0.163  Sum_probs=157.8

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      .+++|+++||||+|+||++++++|.++|+ .|++..|+.+....+. .+...+. ++.++.+|++|++++.++++     
T Consensus         8 ~~~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~   85 (256)
T PRK06124          8 SLAGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAALRAAGG-AAEALAFDIADEEAVAAAFARIDAE   85 (256)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEccCCCHHHHHHHHHHHHHh
Confidence            46689999999999999999999999999 8999988764332221 1111122 68899999999998887765     


Q ss_pred             --CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHH----hcCCCEEEEecceeeeecCCCCCCccccCC
Q 023689           80 --GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (278)
Q Consensus        80 --~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~  149 (278)
                        .+|++||+|+.....    ...++++..+++|+.++..+++++.    +.+.+++|++||..+..+.++.        
T Consensus        86 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~--------  157 (256)
T PRK06124         86 HGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGD--------  157 (256)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCCc--------
Confidence              469999999864431    2234567789999999998886664    3567899999997765544332        


Q ss_pred             CCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccccc
Q 023689          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (278)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (278)
                                  ..|+.+|.+.+.+++.++.+   .++++++++||.+.++....... ............+      ..
T Consensus       158 ------------~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~-~~~~~~~~~~~~~------~~  218 (256)
T PRK06124        158 ------------AVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAA-DPAVGPWLAQRTP------LG  218 (256)
T ss_pred             ------------cHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhcc-ChHHHHHHHhcCC------CC
Confidence                        56999999998888877654   48999999999999986432211 1112222222222      24


Q ss_pred             CcccHHHHHHHHHhhhcCCCC--CceEEecC
Q 023689          227 GAVPVKDVAKAQVLLFESPAA--SGRYLCTN  255 (278)
Q Consensus       227 ~~i~~~D~a~~~~~~~~~~~~--~~~~~~~~  255 (278)
                      .+++++|+++++++++.....  .|.++..+
T Consensus       219 ~~~~~~~~a~~~~~l~~~~~~~~~G~~i~~d  249 (256)
T PRK06124        219 RWGRPEEIAGAAVFLASPAASYVNGHVLAVD  249 (256)
T ss_pred             CCCCHHHHHHHHHHHcCcccCCcCCCEEEEC
Confidence            578999999999999976543  46554333

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.92  E-value=7.1e-24  Score=172.45  Aligned_cols=212  Identities=23%  Similarity=0.219  Sum_probs=154.0

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc---
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE---   79 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---   79 (278)
                      |..+++|++|||||+|+||++++++|+++|+ +|+++.|+++...... .+.... .++.++.+|++|++++.++++   
T Consensus         2 ~~~~~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~   79 (250)
T PRK12939          2 ASNLAGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEARELAAALEAAG-GRAHAIAADLADPASVQRFFDAAA   79 (250)
T ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHH
Confidence            4456679999999999999999999999999 8888888665433221 111111 268899999999999888774   


Q ss_pred             ----CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHh----cCCCEEEEecceeeeecCCCCCCcccc
Q 023689           80 ----GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFD  147 (278)
Q Consensus        80 ----~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~  147 (278)
                          ++|+|||++|.....    .....++..++.|+.++.++++++.+    .+.+++|++||..+..+.+..      
T Consensus        80 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~------  153 (250)
T PRK12939         80 AALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPKL------  153 (250)
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCCc------
Confidence                589999999875431    12235577788999999998888743    345689999997665443321      


Q ss_pred             CCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccc
Q 023689          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (278)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (278)
                                    ..|+.+|...+.+.+.++.+   .+++++.++||.+.++.......  .........+.+      
T Consensus       154 --------------~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~--~~~~~~~~~~~~------  211 (250)
T PRK12939        154 --------------GAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPA--DERHAYYLKGRA------  211 (250)
T ss_pred             --------------chHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCC--hHHHHHHHhcCC------
Confidence                          46999999999999887754   48999999999998886433211  012222222222      


Q ss_pred             ccCcccHHHHHHHHHhhhcCC
Q 023689          225 WLGAVPVKDVAKAQVLLFESP  245 (278)
Q Consensus       225 ~~~~i~~~D~a~~~~~~~~~~  245 (278)
                      ...+++++|+|++++.++...
T Consensus       212 ~~~~~~~~dva~~~~~l~~~~  232 (250)
T PRK12939        212 LERLQVPDDVAGAVLFLLSDA  232 (250)
T ss_pred             CCCCCCHHHHHHHHHHHhCcc
Confidence            456789999999999998764

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.4e-23  Score=174.22  Aligned_cols=211  Identities=16%  Similarity=0.139  Sum_probs=153.8

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCC-Ccccc-cCCCCCCCceEEEEccCCChhhHHHHhc----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~-~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~----   79 (278)
                      .+++|++|||||+|+||++++++|+++|+ .|++..|+... .+... .+...+ .++.++.+|++|.+++.++++    
T Consensus        43 ~~~~k~iLItGasggIG~~la~~l~~~G~-~V~l~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~i~~  120 (290)
T PRK06701         43 KLKGKVALITGGDSGIGRAVAVLFAKEGA-DIAIVYLDEHEDANETKQRVEKEG-VKCLLIPGDVSDEAFCKDAVEETVR  120 (290)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcC-CeEEEEEccCCCHHHHHHHHHHHHH
Confidence            45678999999999999999999999999 88888776432 11111 111112 268899999999998888765    


Q ss_pred             ---CccEEEEecccCCC-----CCCCCchhhhhhhHHhHHHHHHHHHHhc--CCCEEEEecceeeeecCCCCCCccccCC
Q 023689           80 ---GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDET  149 (278)
Q Consensus        80 ---~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~E~  149 (278)
                         ++|+|||+|+....     +...+.+...+++|+.++.++++++.+.  ..+++|++||..++.+.+..        
T Consensus       121 ~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~~~--------  192 (290)
T PRK06701        121 ELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNETL--------  192 (290)
T ss_pred             HcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCCCc--------
Confidence               57999999986432     1222456788999999999999988653  23689999997776554332        


Q ss_pred             CCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccccc
Q 023689          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (278)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (278)
                                  ..|+.+|.+.+.+.+.++.+.   |++++.++||.++++......  .......+....      ...
T Consensus       193 ------------~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~--~~~~~~~~~~~~------~~~  252 (290)
T PRK06701        193 ------------IDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDF--DEEKVSQFGSNT------PMQ  252 (290)
T ss_pred             ------------chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCccccccc--CHHHHHHHHhcC------CcC
Confidence                        469999999999988888764   899999999999998643321  112222222211      135


Q ss_pred             CcccHHHHHHHHHhhhcCCC
Q 023689          227 GAVPVKDVAKAQVLLFESPA  246 (278)
Q Consensus       227 ~~i~~~D~a~~~~~~~~~~~  246 (278)
                      .+.+++|+|+++++++....
T Consensus       253 ~~~~~~dva~~~~~ll~~~~  272 (290)
T PRK06701        253 RPGQPEELAPAYVFLASPDS  272 (290)
T ss_pred             CCcCHHHHHHHHHHHcCccc
Confidence            67899999999999987643

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.2e-23  Score=171.62  Aligned_cols=215  Identities=18%  Similarity=0.168  Sum_probs=152.2

Q ss_pred             cccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCC-ccc-ccCCCCCCCceEEEEccCCChhhHHHHhc-
Q 023689            3 SEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-SHL-FALPGAGDANLRVFEADVLDSGAVSRAVE-   79 (278)
Q Consensus         3 ~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~-~~~-~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-   79 (278)
                      .|.++++|++|||||+|+||++++++|.++|+ +|++..|+.+.. +.. ..+..... ++.++.+|++|++++.++++ 
T Consensus         2 ~~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~i~~~~~~   79 (254)
T PRK06114          2 QLFDLDGQVAFVTGAGSGIGQRIAIGLAQAGA-DVALFDLRTDDGLAETAEHIEAAGR-RAIQIAADVTSKADLRAAVAR   79 (254)
T ss_pred             CccCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHH
Confidence            45667889999999999999999999999999 888888765321 111 11211122 68889999999998888765 


Q ss_pred             ------CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCcc
Q 023689           80 ------GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKV  145 (278)
Q Consensus        80 ------~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~  145 (278)
                            ++|++||+||....    +...++++..+++|+.++..+++++    ++.+.+++|++||.++..+.+..    
T Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~----  155 (254)
T PRK06114         80 TEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGL----  155 (254)
T ss_pred             HHHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCC----
Confidence                  46999999997543    1233567888999999997776665    44556789999997766543321    


Q ss_pred             ccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccc
Q 023689          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQE  222 (278)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (278)
                                    ....|+.+|.+.+.+.+.++.+   +|+++++++||.+.++..... .. ...........|    
T Consensus       156 --------------~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~-~~-~~~~~~~~~~~p----  215 (254)
T PRK06114        156 --------------LQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRP-EM-VHQTKLFEEQTP----  215 (254)
T ss_pred             --------------CcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccc-cc-hHHHHHHHhcCC----
Confidence                          0146999999888888888763   589999999999998864321 11 111122222222    


Q ss_pred             ccccCcccHHHHHHHHHhhhcCC
Q 023689          223 YHWLGAVPVKDVAKAQVLLFESP  245 (278)
Q Consensus       223 ~~~~~~i~~~D~a~~~~~~~~~~  245 (278)
                        ...+..++|+|+.+++++.+.
T Consensus       216 --~~r~~~~~dva~~~~~l~s~~  236 (254)
T PRK06114        216 --MQRMAKVDEMVGPAVFLLSDA  236 (254)
T ss_pred             --CCCCcCHHHHHHHHHHHcCcc
Confidence              234678999999999988653

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.92  E-value=9.7e-24  Score=171.74  Aligned_cols=219  Identities=14%  Similarity=0.098  Sum_probs=153.4

Q ss_pred             cccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         5 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      ..+++|++|||||+|+||++++++|.++|+ .|++..|+... .....+...+. ++.++.+|++|++++.++++     
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~-~vv~~~~~~~~-~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (251)
T PRK12481          4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGA-DIVGVGVAEAP-ETQAQVEALGR-KFHFITADLIQQKDIDSIVSQAVEV   80 (251)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCchHH-HHHHHHHHcCC-eEEEEEeCCCCHHHHHHHHHHHHHH
Confidence            356789999999999999999999999999 78777765321 11111111122 68899999999999888875     


Q ss_pred             --CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHh----cC-CCEEEEecceeeeecCCCCCCccccC
Q 023689           80 --GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FG-VRRVVVTSSISAIVPNPGWKGKVFDE  148 (278)
Q Consensus        80 --~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~----~~-~~~~v~~Ss~~~~~~~~~~~~~~~~E  148 (278)
                        ++|++||+||.....    ...++++..+++|+.++..+.+++.+    .+ .+++|++||..++.+.+..       
T Consensus        81 ~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~-------  153 (251)
T PRK12481         81 MGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRV-------  153 (251)
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCC-------
Confidence              579999999975432    22356788999999998888776633    33 3689999998776543322       


Q ss_pred             CCCCchhhhhccCchhhhHHHHHHHHHHHHHH---hcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccc
Q 023689          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (278)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (278)
                                   ..|+.+|.+.+.+.+.++.   .+|+++++++||.+-++....... ............|      .
T Consensus       154 -------------~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~p------~  213 (251)
T PRK12481        154 -------------PSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRA-DTARNEAILERIP------A  213 (251)
T ss_pred             -------------cchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhccc-ChHHHHHHHhcCC------C
Confidence                         4699999999988887776   459999999999998875332111 1111122222222      2


Q ss_pred             cCcccHHHHHHHHHhhhcCCC--CCceEEe
Q 023689          226 LGAVPVKDVAKAQVLLFESPA--ASGRYLC  253 (278)
Q Consensus       226 ~~~i~~~D~a~~~~~~~~~~~--~~~~~~~  253 (278)
                      ..+..++|+|+++.+++....  ..|..+.
T Consensus       214 ~~~~~peeva~~~~~L~s~~~~~~~G~~i~  243 (251)
T PRK12481        214 SRWGTPDDLAGPAIFLSSSASDYVTGYTLA  243 (251)
T ss_pred             CCCcCHHHHHHHHHHHhCccccCcCCceEE
Confidence            346789999999999986533  3454443

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.92  E-value=6.7e-24  Score=171.36  Aligned_cols=211  Identities=21%  Similarity=0.225  Sum_probs=153.2

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccc-ccCCCCCCCceEEEEccCCChhhHHHHhc---
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL-FALPGAGDANLRVFEADVLDSGAVSRAVE---   79 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~-~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---   79 (278)
                      |..+++|++|||||+|+||++++++|+++|+ .|+++.|++.+.... ..+..   ..++++.+|++|.+++.++++   
T Consensus         2 ~~~~~~k~vlItGatg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~   77 (239)
T PRK12828          2 EHSLQGKVVAITGGFGGLGRATAAWLAARGA-RVALIGRGAAPLSQTLPGVPA---DALRIGGIDLVDPQAARRAVDEVN   77 (239)
T ss_pred             CCCCCCCEEEEECCCCcHhHHHHHHHHHCCC-eEEEEeCChHhHHHHHHHHhh---cCceEEEeecCCHHHHHHHHHHHH
Confidence            3456689999999999999999999999999 899999976542221 11111   156788899999998887765   


Q ss_pred             ----CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHH----hcCCCEEEEecceeeeecCCCCCCcccc
Q 023689           80 ----GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFD  147 (278)
Q Consensus        80 ----~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~  147 (278)
                          ++|+|||+++.....    ...+.+.+.++.|+.++.++++++.    +.+.+++|++||..++.+.+.       
T Consensus        78 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-------  150 (239)
T PRK12828         78 RQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPG-------  150 (239)
T ss_pred             HHhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCCC-------
Confidence                579999999864431    1223456778899999999888774    456789999999776544322       


Q ss_pred             CCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccc
Q 023689          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (278)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (278)
                                   ...|+.+|.+.+.+++.++..   .+++++++|||.++++......              +   ...
T Consensus       151 -------------~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~~--------------~---~~~  200 (239)
T PRK12828        151 -------------MGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRADM--------------P---DAD  200 (239)
T ss_pred             -------------cchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhcC--------------C---chh
Confidence                         146999999988888777654   4899999999999998432210              0   001


Q ss_pred             ccCcccHHHHHHHHHhhhcCCCC--Cce-EEecC
Q 023689          225 WLGAVPVKDVAKAQVLLFESPAA--SGR-YLCTN  255 (278)
Q Consensus       225 ~~~~i~~~D~a~~~~~~~~~~~~--~~~-~~~~~  255 (278)
                      ...+++++|+|+++.+++.+...  .|. +.+.+
T Consensus       201 ~~~~~~~~dva~~~~~~l~~~~~~~~g~~~~~~g  234 (239)
T PRK12828        201 FSRWVTPEQIAAVIAFLLSDEAQAITGASIPVDG  234 (239)
T ss_pred             hhcCCCHHHHHHHHHHHhCcccccccceEEEecC
Confidence            23478999999999999986532  354 44444

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.92  E-value=1e-23  Score=172.34  Aligned_cols=210  Identities=15%  Similarity=0.091  Sum_probs=150.5

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      .+++|++|||||+|+||++++++|+++|+ .|++..|+. ..+.+.. +.... .++.++++|++|.+++.++++     
T Consensus        12 ~l~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~   88 (258)
T PRK06935         12 SLDGKVAIVTGGNTGLGQGYAVALAKAGA-DIIITTHGT-NWDETRRLIEKEG-RKVTFVQVDLTKPESAEKVVKEALEE   88 (258)
T ss_pred             cCCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCc-HHHHHHHHHHhcC-CceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            56789999999999999999999999999 888887762 2222221 11112 268899999999998888776     


Q ss_pred             --CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccCC
Q 023689           80 --GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (278)
Q Consensus        80 --~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~  149 (278)
                        .+|++||+||....    +...+.++..+++|+.++..+++++    ++.+.+++|++||..++.+.+..        
T Consensus        89 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------  160 (258)
T PRK06935         89 FGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFV--------  160 (258)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCCc--------
Confidence              57999999987543    1223467788999999987777655    44556789999997765443321        


Q ss_pred             CCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccccc
Q 023689          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (278)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (278)
                                  ..|+.+|.+.+.+.+.++++   +|+++++++||.+.++........ ...........+      ..
T Consensus       161 ------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~-~~~~~~~~~~~~------~~  221 (258)
T PRK06935        161 ------------PAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRAD-KNRNDEILKRIP------AG  221 (258)
T ss_pred             ------------hhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccC-hHHHHHHHhcCC------CC
Confidence                        46999999999998888875   489999999999998854321110 111112222111      34


Q ss_pred             CcccHHHHHHHHHhhhcCC
Q 023689          227 GAVPVKDVAKAQVLLFESP  245 (278)
Q Consensus       227 ~~i~~~D~a~~~~~~~~~~  245 (278)
                      .+..++|+|..+.+++...
T Consensus       222 ~~~~~~dva~~~~~l~s~~  240 (258)
T PRK06935        222 RWGEPDDLMGAAVFLASRA  240 (258)
T ss_pred             CCCCHHHHHHHHHHHcChh
Confidence            5788899999999988653

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.92  E-value=4.7e-23  Score=168.64  Aligned_cols=210  Identities=17%  Similarity=0.140  Sum_probs=149.3

Q ss_pred             CccccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc-
Q 023689            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-   79 (278)
Q Consensus         1 m~~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-   79 (278)
                      |+.+.++++|++|||||+|+||++++++|.++|+ +|+++.|+.....        . .++.++++|++|++++.++++ 
T Consensus         1 ~~~~~~~~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~--------~-~~~~~~~~D~~~~~~~~~~~~~   70 (260)
T PRK06523          1 MSFFLELAGKRALVTGGTKGIGAATVARLLEAGA-RVVTTARSRPDDL--------P-EGVEFVAADLTTAEGCAAVARA   70 (260)
T ss_pred             CCcCcCCCCCEEEEECCCCchhHHHHHHHHHCCC-EEEEEeCChhhhc--------C-CceeEEecCCCCHHHHHHHHHH
Confidence            4445577889999999999999999999999999 8988888754311        1 168899999999988776653 


Q ss_pred             ------CccEEEEecccCCC------CCCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCC
Q 023689           80 ------GCKGVFHVASPCTL------EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKG  143 (278)
Q Consensus        80 ------~~d~vi~~a~~~~~------~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~  143 (278)
                            ++|+|||+||....      ....++++..+++|+.++..+++++    ++.+.+++|++||..+..+.+.   
T Consensus        71 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~---  147 (260)
T PRK06523         71 VLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPE---  147 (260)
T ss_pred             HHHHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCC---
Confidence                  57999999985421      1233567888999999987776554    4555678999999766433210   


Q ss_pred             ccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCc--------hhHHHHHH
Q 023689          144 KVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN--------ASCAVLQQ  212 (278)
Q Consensus       144 ~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~--------~~~~~~~~  212 (278)
                                      ....|+.+|...+.+.+.++.+   .|+++++++||.+.++.......        ........
T Consensus       148 ----------------~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  211 (260)
T PRK06523        148 ----------------STTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQI  211 (260)
T ss_pred             ----------------CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHH
Confidence                            1257999999999888888764   48999999999999986321100        00011111


Q ss_pred             H---hhCCCCcccccccCcccHHHHHHHHHhhhcCC
Q 023689          213 L---LQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP  245 (278)
Q Consensus       213 ~---~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  245 (278)
                      +   ..+.|      ...+..++|+|+++.+++...
T Consensus       212 ~~~~~~~~p------~~~~~~~~~va~~~~~l~s~~  241 (260)
T PRK06523        212 IMDSLGGIP------LGRPAEPEEVAELIAFLASDR  241 (260)
T ss_pred             HHHHhccCc------cCCCCCHHHHHHHHHHHhCcc
Confidence            1   11111      234568999999999998653

>PRK08589 short chain dehydrogenase; Validated

Probab=99.92  E-value=1.3e-23  Score=173.09  Aligned_cols=222  Identities=20%  Similarity=0.177  Sum_probs=151.5

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcc-cccCCCCCCCceEEEEccCCChhhHHHHhc---
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSH-LFALPGAGDANLRVFEADVLDSGAVSRAVE---   79 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~-~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---   79 (278)
                      |..+++|++|||||+|+||++++++|+++|+ .|++..|+ +.... ...+.... .++.++++|++|++++.++++   
T Consensus         1 m~~l~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~-~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~   77 (272)
T PRK08589          1 MKRLENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIA-EAVSETVDKIKSNG-GKAKAYHVDISDEQQVKDFASEIK   77 (272)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCc-HHHHHHHHHHHhcC-CeEEEEEeecCCHHHHHHHHHHHH
Confidence            4456789999999999999999999999999 88888887 33222 22222111 268899999999988887765   


Q ss_pred             ----CccEEEEecccCCC-----CCCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccc
Q 023689           80 ----GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVF  146 (278)
Q Consensus        80 ----~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~  146 (278)
                          ++|++||+||....     +...+.++..+++|+.++..+++++    ++.+ +++|++||..+..+.+..     
T Consensus        78 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~-----  151 (272)
T PRK08589         78 EQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAADLYR-----  151 (272)
T ss_pred             HHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCCCCCC-----
Confidence                47999999987532     1122356778899998887666665    4444 689999997765543321     


Q ss_pred             cCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhH-HHHHHHhhCCCCccc
Q 023689          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASC-AVLQQLLQGSKDTQE  222 (278)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~-~~~~~~~~~~~~~~~  222 (278)
                                     ..|+.+|.+.+.+.+.++.+   .|+++++++||.|.++.......... .............. 
T Consensus       152 ---------------~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~-  215 (272)
T PRK08589        152 ---------------SGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMT-  215 (272)
T ss_pred             ---------------chHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccC-
Confidence                           56999999999999888864   48999999999999885432111000 10011100000001 


Q ss_pred             ccccCcccHHHHHHHHHhhhcCCC--CCceE
Q 023689          223 YHWLGAVPVKDVAKAQVLLFESPA--ASGRY  251 (278)
Q Consensus       223 ~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~  251 (278)
                       ....+..++|+|+++++++....  ..|..
T Consensus       216 -~~~~~~~~~~va~~~~~l~s~~~~~~~G~~  245 (272)
T PRK08589        216 -PLGRLGKPEEVAKLVVFLASDDSSFITGET  245 (272)
T ss_pred             -CCCCCcCHHHHHHHHHHHcCchhcCcCCCE
Confidence             12346789999999999987533  24544

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.92  E-value=6.7e-24  Score=173.35  Aligned_cols=196  Identities=19%  Similarity=0.150  Sum_probs=147.7

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCCCCCCceEEEEccCCChhhHHHHhc-------C
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~   80 (278)
                      +|++|||||+|+||++++++|.++|+ +|++++|+.+..+.... +.. .. ++.++.+|++|++++.++++       .
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~-~~-~~~~~~~Dl~~~~~i~~~~~~~~~~~g~   78 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPK-AA-RVSVYAADVRDADALAAAAADFIAAHGL   78 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccc-CC-eeEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            47999999999999999999999999 88888887654333222 211 12 68899999999999888765       3


Q ss_pred             ccEEEEecccCCCC-----CCCCchhhhhhhHHhHHHHHHH----HHHhcCCCEEEEecceeeeecCCCCCCccccCCCC
Q 023689           81 CKGVFHVASPCTLE-----DPVDPEKELILPAVQGTLNVLE----AAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (278)
Q Consensus        81 ~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~ll~----~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~  151 (278)
                      +|++||+||.....     ...+.++..+++|+.++.++++    ++++.+.++||++||..++++.+..          
T Consensus        79 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~~~----------  148 (257)
T PRK07024         79 PDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLPGA----------  148 (257)
T ss_pred             CCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCC----------
Confidence            79999999875431     1224567889999999988776    5566667899999998876654432          


Q ss_pred             CchhhhhccCchhhhHHHHHHHHHHHHHH---hcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCc
Q 023689          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (278)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (278)
                                ..|+.+|...+.+.+.++.   .+|+++++++||.+.++.....             ..+      ...+
T Consensus       149 ----------~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~-------------~~~------~~~~  199 (257)
T PRK07024        149 ----------GAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAHN-------------PYP------MPFL  199 (257)
T ss_pred             ----------cchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhcC-------------CCC------CCCc
Confidence                      5699999999999888763   4599999999999998753211             000      1123


Q ss_pred             ccHHHHHHHHHhhhcCCC
Q 023689          229 VPVKDVAKAQVLLFESPA  246 (278)
Q Consensus       229 i~~~D~a~~~~~~~~~~~  246 (278)
                      ++++|+|+.++.++.+..
T Consensus       200 ~~~~~~a~~~~~~l~~~~  217 (257)
T PRK07024        200 MDADRFAARAARAIARGR  217 (257)
T ss_pred             cCHHHHHHHHHHHHhCCC
Confidence            689999999999997643

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.92  E-value=9.3e-24  Score=173.12  Aligned_cols=227  Identities=20%  Similarity=0.195  Sum_probs=156.5

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc----
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~----   79 (278)
                      |+.+++|++|||||+|+||++++++|+++|+ .|+++.|+....+....+.... .++.++.+|+++++++.++++    
T Consensus         1 ~~~~~~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~   78 (263)
T PRK08226          1 MGKLTGKTALITGALQGIGEGIARVFARHGA-NLILLDISPEIEKLADELCGRG-HRCTAVVADVRDPASVAAAIKRAKE   78 (263)
T ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhC-CceEEEECCCCCHHHHHHHHHHHHH
Confidence            4456679999999999999999999999999 7888888653222222221111 267899999999998888765    


Q ss_pred             ---CccEEEEecccCCCCC----CCCchhhhhhhHHhHHHHHHHHHHh----cCCCEEEEecceeee-ecCCCCCCcccc
Q 023689           80 ---GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAI-VPNPGWKGKVFD  147 (278)
Q Consensus        80 ---~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~v~~Ss~~~~-~~~~~~~~~~~~  147 (278)
                         .+|+|||+||......    ..+.+++.+++|+.++..+++++.+    .+.+++|++||..+. .+.+.       
T Consensus        79 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~-------  151 (263)
T PRK08226         79 KEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPG-------  151 (263)
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCCCC-------
Confidence               5799999999754321    2234566799999999998887643    345789999986542 11111       


Q ss_pred             CCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCC-----chhHHHHHHHhhCCCC
Q 023689          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYL-----NASCAVLQQLLQGSKD  219 (278)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~-----~~~~~~~~~~~~~~~~  219 (278)
                                   ...|+.+|...+.+.+.++.+.   +++++.++||.+.++......     ............+.| 
T Consensus       152 -------------~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p-  217 (263)
T PRK08226        152 -------------ETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIP-  217 (263)
T ss_pred             -------------cchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCC-
Confidence                         1469999999999998888654   899999999999988532110     011223333333322 


Q ss_pred             cccccccCcccHHHHHHHHHhhhcCC--CCCceEEecCccc
Q 023689          220 TQEYHWLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGIY  258 (278)
Q Consensus       220 ~~~~~~~~~i~~~D~a~~~~~~~~~~--~~~~~~~~~~~~~  258 (278)
                           ...+..++|+|+++.+++...  ...|.++..++..
T Consensus       218 -----~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~dgg~  253 (263)
T PRK08226        218 -----LRRLADPLEVGELAAFLASDESSYLTGTQNVIDGGS  253 (263)
T ss_pred             -----CCCCCCHHHHHHHHHHHcCchhcCCcCceEeECCCc
Confidence                 234679999999998887543  2345554434433

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.92  E-value=4.4e-23  Score=166.32  Aligned_cols=203  Identities=16%  Similarity=0.141  Sum_probs=148.2

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCCh-hhHHHHhcCccEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS-GAVSRAVEGCKGV   84 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~-~~~~~~~~~~d~v   84 (278)
                      ++++|++|||||+|+||+++++.|.++|+ .|++..|+.....        . .++.++.+|++++ +.+.+.+.++|+|
T Consensus         2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~--------~-~~~~~~~~D~~~~~~~~~~~~~~id~l   71 (235)
T PRK06550          2 EFMTKTVLITGAASGIGLAQARAFLAQGA-QVYGVDKQDKPDL--------S-GNFHFLQLDLSDDLEPLFDWVPSVDIL   71 (235)
T ss_pred             CCCCCEEEEcCCCchHHHHHHHHHHHCCC-EEEEEeCCccccc--------C-CcEEEEECChHHHHHHHHHhhCCCCEE
Confidence            35678999999999999999999999999 8888887653311        1 1688999999997 4455555678999


Q ss_pred             EEecccCCC-----CCCCCchhhhhhhHHhHHHHHHHHHHh----cCCCEEEEecceeeeecCCCCCCccccCCCCCchh
Q 023689           85 FHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLE  155 (278)
Q Consensus        85 i~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~  155 (278)
                      ||+||....     +...++++..+++|+.++.++++++..    .+.++||++||..+..+.++.              
T Consensus        72 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~--------------  137 (235)
T PRK06550         72 CNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGGG--------------  137 (235)
T ss_pred             EECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCC--------------
Confidence            999985421     223346678899999999999888743    445689999997776543332              


Q ss_pred             hhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHH
Q 023689          156 YCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVK  232 (278)
Q Consensus       156 ~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  232 (278)
                            ..|+.+|...+.+.+.++.+.   |+++++++||.+.++....... ............+      ...+..++
T Consensus       138 ------~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~~------~~~~~~~~  204 (235)
T PRK06550        138 ------AAYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFE-PGGLADWVARETP------IKRWAEPE  204 (235)
T ss_pred             ------cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccC-chHHHHHHhccCC------cCCCCCHH
Confidence                  469999999888888777654   8999999999999886432211 1112222222222      34577899


Q ss_pred             HHHHHHHhhhcCC
Q 023689          233 DVAKAQVLLFESP  245 (278)
Q Consensus       233 D~a~~~~~~~~~~  245 (278)
                      |+|+++++++.+.
T Consensus       205 ~~a~~~~~l~s~~  217 (235)
T PRK06550        205 EVAELTLFLASGK  217 (235)
T ss_pred             HHHHHHHHHcChh
Confidence            9999999998653

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.92  E-value=1.7e-23  Score=170.11  Aligned_cols=205  Identities=18%  Similarity=0.172  Sum_probs=146.4

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc-------Ccc
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GCK   82 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d   82 (278)
                      |+++||||||+||.++++.|+++|+ +|++..|+++..+.+....  . .++.++.+|++|.+++.++++       ++|
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~--~-~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id   76 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDEL--G-DNLYIAQLDVRNRAAIEEMLASLPAEWRNID   76 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHh--c-cceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            5899999999999999999999999 8999988765443332211  1 168899999999998887765       689


Q ss_pred             EEEEecccCCC-----CCCCCchhhhhhhHHhHHHHHHHH----HHhcCCCEEEEecceeeeecCCCCCCccccCCCCCc
Q 023689           83 GVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEA----AKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (278)
Q Consensus        83 ~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~----~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~  153 (278)
                      +|||+||....     ....++++..+++|+.++..++++    +++.+.+++|++||..+..+..+             
T Consensus        77 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-------------  143 (248)
T PRK10538         77 VLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAG-------------  143 (248)
T ss_pred             EEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCCC-------------
Confidence            99999986421     123346678899999986655554    45566789999999765433222             


Q ss_pred             hhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCC-CchhHHHHHHHhhCCCCcccccccCcc
Q 023689          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPY-LNASCAVLQQLLQGSKDTQEYHWLGAV  229 (278)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i  229 (278)
                             ...|+.+|.+.+.+.+.++.+   .++++++++||.+.|+..... .............         ...++
T Consensus       144 -------~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~~~~~~---------~~~~~  207 (248)
T PRK10538        144 -------GNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQ---------NTVAL  207 (248)
T ss_pred             -------CchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcHHHHHhhcc---------ccCCC
Confidence                   157999999999999888765   489999999999987653221 0000011111111         22457


Q ss_pred             cHHHHHHHHHhhhcCCCC
Q 023689          230 PVKDVAKAQVLLFESPAA  247 (278)
Q Consensus       230 ~~~D~a~~~~~~~~~~~~  247 (278)
                      .++|+|+++++++..+..
T Consensus       208 ~~~dvA~~~~~l~~~~~~  225 (248)
T PRK10538        208 TPEDVSEAVWWVATLPAH  225 (248)
T ss_pred             CHHHHHHHHHHHhcCCCc
Confidence            999999999999876544

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.92  E-value=2.3e-23  Score=169.77  Aligned_cols=214  Identities=16%  Similarity=0.160  Sum_probs=153.4

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc---
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE---   79 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---   79 (278)
                      |+.+++|++|||||+|+||.+++++|.++|+ .|+++.|+....+.+. .+.... .++.++++|++|.+++.++++   
T Consensus         3 ~~~l~~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~   80 (252)
T PRK07035          3 LFDLTGKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAG-GKAEALACHIGEMEQIDALFAHIR   80 (252)
T ss_pred             ccccCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CeEEEEEcCCCCHHHHHHHHHHHH
Confidence            3456779999999999999999999999999 8888888654432222 111111 167889999999998877765   


Q ss_pred             ----CccEEEEecccCCC-----CCCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccc
Q 023689           80 ----GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVF  146 (278)
Q Consensus        80 ----~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~  146 (278)
                          ++|++||+|+....     ....+.++..+++|+.++..+++++    ++.+.+++|++||..+..+.+.      
T Consensus        81 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~------  154 (252)
T PRK07035         81 ERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDF------  154 (252)
T ss_pred             HHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCCC------
Confidence                47999999985321     2233456788999999988877766    4455678999998766544322      


Q ss_pred             cCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccc
Q 023689          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (278)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (278)
                                    .+.|+.+|.+.+.+.+.++++.   |+++++++||.+.++........ ...........+     
T Consensus       155 --------------~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~-~~~~~~~~~~~~-----  214 (252)
T PRK07035        155 --------------QGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKN-DAILKQALAHIP-----  214 (252)
T ss_pred             --------------CcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCC-HHHHHHHHccCC-----
Confidence                          1579999999999999888653   89999999999988754332111 122222222222     


Q ss_pred             cccCcccHHHHHHHHHhhhcCCC
Q 023689          224 HWLGAVPVKDVAKAQVLLFESPA  246 (278)
Q Consensus       224 ~~~~~i~~~D~a~~~~~~~~~~~  246 (278)
                       ...+..++|+|+++.+++.+..
T Consensus       215 -~~~~~~~~~va~~~~~l~~~~~  236 (252)
T PRK07035        215 -LRRHAEPSEMAGAVLYLASDAS  236 (252)
T ss_pred             -CCCcCCHHHHHHHHHHHhCccc
Confidence             2446789999999999987653

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.3e-23  Score=172.31  Aligned_cols=223  Identities=21%  Similarity=0.153  Sum_probs=154.7

Q ss_pred             CccccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc
Q 023689            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE   79 (278)
Q Consensus         1 m~~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~   79 (278)
                      |.-|+.+++|++|||||+|+||++++++|++.|+ .|+++.|+++...... .+..... ++.++.+|++|++++.++++
T Consensus         1 ~~~~~~~~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~i~~~~~   78 (264)
T PRK07576          1 MTTMFDFAGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGP-EGLGVSADVRDYAAVEAAFA   78 (264)
T ss_pred             CCccccCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCC-ceEEEECCCCCHHHHHHHHH
Confidence            4456778889999999999999999999999999 8988888765432221 1111111 67889999999998888765


Q ss_pred             -------CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHHHhc---CCCEEEEecceeeeecCCCCCCcc
Q 023689           80 -------GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKV  145 (278)
Q Consensus        80 -------~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~v~~Ss~~~~~~~~~~~~~~  145 (278)
                             ++|++||+|+....    +...+++...+++|+.++.++++++...   ..+++|++||..+..+.+..    
T Consensus        79 ~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~~~~~----  154 (264)
T PRK07576         79 QIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVPMPMQ----  154 (264)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccCCCCc----
Confidence                   46999999975432    2223456778899999999999887542   22689999997665433321    


Q ss_pred             ccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCC-CCCCCchhHHHHHHHhhCCCCcc
Q 023689          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPL-MQPYLNASCAVLQQLLQGSKDTQ  221 (278)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~-~~~~~~~~~~~~~~~~~~~~~~~  221 (278)
                                      ..|+.+|...+.+.+.++.+   .|+++++++|+.+.+.. ...... ............+   
T Consensus       155 ----------------~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~-~~~~~~~~~~~~~---  214 (264)
T PRK07576        155 ----------------AHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAP-SPELQAAVAQSVP---  214 (264)
T ss_pred             ----------------cHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhccc-CHHHHHHHHhcCC---
Confidence                            57999999999998888754   48999999999987532 111100 0111111111111   


Q ss_pred             cccccCcccHHHHHHHHHhhhcCCC--CCceEE
Q 023689          222 EYHWLGAVPVKDVAKAQVLLFESPA--ASGRYL  252 (278)
Q Consensus       222 ~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~  252 (278)
                         ...+..++|+|+++++++....  ..|.++
T Consensus       215 ---~~~~~~~~dva~~~~~l~~~~~~~~~G~~~  244 (264)
T PRK07576        215 ---LKRNGTKQDIANAALFLASDMASYITGVVL  244 (264)
T ss_pred             ---CCCCCCHHHHHHHHHHHcChhhcCccCCEE
Confidence               3456789999999999997533  245543

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.4e-23  Score=171.08  Aligned_cols=219  Identities=18%  Similarity=0.112  Sum_probs=155.4

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      .+++|++|||||+|+||++++++|.++|+ +|+++.|+++..+... .+.... .+++++.+|++|.+++.++++     
T Consensus         4 ~l~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~   81 (253)
T PRK06172          4 TFSGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAAGGEETVALIREAG-GEALFVACDVTRDAEVKALVEQTIAA   81 (253)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcC-CceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            46679999999999999999999999999 8888888765432221 111111 268899999999998888765     


Q ss_pred             --CccEEEEecccCCC-----CCCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccC
Q 023689           80 --GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (278)
Q Consensus        80 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E  148 (278)
                        ++|+|||+||....     +...++++..+++|+.++..+++++    .+.+.+++|++||..++.+.++.       
T Consensus        82 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~-------  154 (253)
T PRK06172         82 YGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKM-------  154 (253)
T ss_pred             hCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCC-------
Confidence              46999999986432     1223466788999999987766644    44556789999997776554332       


Q ss_pred             CCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccc
Q 023689          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (278)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (278)
                                   ..|+.+|.+.+.+.+.++.+.   |+++++++||.+-++....................+      .
T Consensus       155 -------------~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~------~  215 (253)
T PRK06172        155 -------------SIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHP------V  215 (253)
T ss_pred             -------------chhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccCC------C
Confidence                         579999999999998888764   799999999999887643321111122222222222      2


Q ss_pred             cCcccHHHHHHHHHhhhcCCC--CCceEE
Q 023689          226 LGAVPVKDVAKAQVLLFESPA--ASGRYL  252 (278)
Q Consensus       226 ~~~i~~~D~a~~~~~~~~~~~--~~~~~~  252 (278)
                      ..+..++|+++.+.+++....  ..|.++
T Consensus       216 ~~~~~p~~ia~~~~~l~~~~~~~~~G~~i  244 (253)
T PRK06172        216 GRIGKVEEVASAVLYLCSDGASFTTGHAL  244 (253)
T ss_pred             CCccCHHHHHHHHHHHhCccccCcCCcEE
Confidence            346789999999999987543  346554

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.92  E-value=2e-23  Score=170.73  Aligned_cols=219  Identities=15%  Similarity=0.126  Sum_probs=152.7

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCCC-CCCceEEEEccCCChhhHHHHhc-------
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGA-GDANLRVFEADVLDSGAVSRAVE-------   79 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~~-~~~~v~~~~~Dl~d~~~~~~~~~-------   79 (278)
                      +|++|||||+|+||+++++.|.++|+ .|+++.|+......... +... ...++.++.+|++|.+++.++++       
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   80 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFG   80 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            47899999999999999999999999 88888887543322211 1110 11168899999999988887765       


Q ss_pred             CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHh----cC-CCEEEEecceeeeecCCCCCCccccCCC
Q 023689           80 GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FG-VRRVVVTSSISAIVPNPGWKGKVFDETS  150 (278)
Q Consensus        80 ~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~----~~-~~~~v~~Ss~~~~~~~~~~~~~~~~E~~  150 (278)
                      .+|+|||+||.....    ...++++..+++|+.++..+++++.+    .+ .+++|++||..+.++.+.          
T Consensus        81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~----------  150 (259)
T PRK12384         81 RVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKH----------  150 (259)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCC----------
Confidence            579999999865432    22345677889999998877776643    44 468999998766544322          


Q ss_pred             CCchhhhhccCchhhhHHHHHHHHHHHHHH---hcCCceEEEecceeeCCCCCCCCchhHHHHH-----------HHhhC
Q 023689          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLNASCAVLQ-----------QLLQG  216 (278)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~-----------~~~~~  216 (278)
                                ...|+.+|.+.+.+.+.++.   ++|++++++|||.++++.....  .+..+..           ....+
T Consensus       151 ----------~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  218 (259)
T PRK12384        151 ----------NSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQS--LLPQYAKKLGIKPDEVEQYYIDK  218 (259)
T ss_pred             ----------CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhh--hhHHHHHhcCCChHHHHHHHHHh
Confidence                      15799999999888888875   4699999999999887643221  1111111           11111


Q ss_pred             CCCcccccccCcccHHHHHHHHHhhhcCCCC--Cc-eEEecCc
Q 023689          217 SKDTQEYHWLGAVPVKDVAKAQVLLFESPAA--SG-RYLCTNG  256 (278)
Q Consensus       217 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~-~~~~~~~  256 (278)
                            .....+++++|++++++.++.+...  .| .++++++
T Consensus       219 ------~~~~~~~~~~dv~~~~~~l~~~~~~~~~G~~~~v~~g  255 (259)
T PRK12384        219 ------VPLKRGCDYQDVLNMLLFYASPKASYCTGQSINVTGG  255 (259)
T ss_pred             ------CcccCCCCHHHHHHHHHHHcCcccccccCceEEEcCC
Confidence                  1356789999999999988865432  34 4555544

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.92  E-value=3e-23  Score=169.12  Aligned_cols=225  Identities=15%  Similarity=0.113  Sum_probs=156.5

Q ss_pred             CccccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc-
Q 023689            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-   79 (278)
Q Consensus         1 m~~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-   79 (278)
                      |++| ++++|++|||||+|+||++++++|.++|+ .|++..++.. .+....+..... ++..+++|++|.+++.++++ 
T Consensus         3 ~~~~-~l~~k~~lItG~~~gIG~a~a~~l~~~G~-~vv~~~~~~~-~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~   78 (253)
T PRK08993          3 LDAF-SLEGKVAVVTGCDTGLGQGMALGLAEAGC-DIVGINIVEP-TETIEQVTALGR-RFLSLTADLRKIDGIPALLER   78 (253)
T ss_pred             cccc-CCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEecCcch-HHHHHHHHhcCC-eEEEEECCCCCHHHHHHHHHH
Confidence            3455 46789999999999999999999999999 7877765432 111112211122 68899999999998888775 


Q ss_pred             ------CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHh----cC-CCEEEEecceeeeecCCCCCCc
Q 023689           80 ------GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FG-VRRVVVTSSISAIVPNPGWKGK  144 (278)
Q Consensus        80 ------~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~----~~-~~~~v~~Ss~~~~~~~~~~~~~  144 (278)
                            ++|++||+||.....    ...++++..+++|+.++.++++++..    ++ -+++|++||..++.+.+..   
T Consensus        79 ~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---  155 (253)
T PRK08993         79 AVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRV---  155 (253)
T ss_pred             HHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCC---
Confidence                  479999999975431    22356789999999999988887743    22 3689999997766543332   


Q ss_pred             cccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcc
Q 023689          145 VFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ  221 (278)
Q Consensus       145 ~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~  221 (278)
                                       ..|+.+|.+.+.+.+.++.+   +|++++.++||.+.++....... ............|   
T Consensus       156 -----------------~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~-~~~~~~~~~~~~p---  214 (253)
T PRK08993        156 -----------------PSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRA-DEQRSAEILDRIP---  214 (253)
T ss_pred             -----------------cchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhcc-chHHHHHHHhcCC---
Confidence                             46999999999888888765   58999999999999885432110 0111112222212   


Q ss_pred             cccccCcccHHHHHHHHHhhhcCCCC--CceEEecCc
Q 023689          222 EYHWLGAVPVKDVAKAQVLLFESPAA--SGRYLCTNG  256 (278)
Q Consensus       222 ~~~~~~~i~~~D~a~~~~~~~~~~~~--~~~~~~~~~  256 (278)
                         ...+..++|+|+.+++++.+...  .|..+..++
T Consensus       215 ---~~r~~~p~eva~~~~~l~s~~~~~~~G~~~~~dg  248 (253)
T PRK08993        215 ---AGRWGLPSDLMGPVVFLASSASDYINGYTIAVDG  248 (253)
T ss_pred             ---CCCCcCHHHHHHHHHHHhCccccCccCcEEEECC
Confidence               23477899999999999875432  455443333

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.92  E-value=8.7e-24  Score=171.07  Aligned_cols=207  Identities=18%  Similarity=0.175  Sum_probs=150.2

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCCCCCCceEEEEccCCChhhHHHHhc---
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE---   79 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~---   79 (278)
                      |...+||++|||||+|+||+.++++|+++|+ .|+++.|+++....+.. +.... .++.++.+|++|++++.++++   
T Consensus         1 ~~~~~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~   78 (241)
T PRK07454          1 MSLNSMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTG-VKAAAYSIDLSNPEAIAPGIAELL   78 (241)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCC-CcEEEEEccCCCHHHHHHHHHHHH
Confidence            4445688999999999999999999999999 89999987654332221 11111 278899999999998877765   


Q ss_pred             ----CccEEEEecccCCCCC----CCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCcccc
Q 023689           80 ----GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFD  147 (278)
Q Consensus        80 ----~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~  147 (278)
                          ++|+|||+||......    ..+.++..+++|+.++.++++++    ++.+.+++|++||..++.+.+.       
T Consensus        79 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-------  151 (241)
T PRK07454         79 EQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQ-------  151 (241)
T ss_pred             HHcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCC-------
Confidence                4799999998754321    22456778999999888877765    4455678999999766543322       


Q ss_pred             CCCCCchhhhhccCchhhhHHHHHHHHHHHHHH---hcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccc
Q 023689          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (278)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (278)
                                   ...|+.+|.+.+.+.+.+++   ..|++++++|||.+.++......  .    .   ..      ..
T Consensus       152 -------------~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~~--~----~---~~------~~  203 (241)
T PRK07454        152 -------------WGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTET--V----Q---AD------FD  203 (241)
T ss_pred             -------------ccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCcccccc--c----c---cc------cc
Confidence                         15699999999988887764   34999999999999887532110  0    0   00      00


Q ss_pred             ccCcccHHHHHHHHHhhhcCCCC
Q 023689          225 WLGAVPVKDVAKAQVLLFESPAA  247 (278)
Q Consensus       225 ~~~~i~~~D~a~~~~~~~~~~~~  247 (278)
                      ...+++++|+|++++.++.++..
T Consensus       204 ~~~~~~~~~va~~~~~l~~~~~~  226 (241)
T PRK07454        204 RSAMLSPEQVAQTILHLAQLPPS  226 (241)
T ss_pred             cccCCCHHHHHHHHHHHHcCCcc
Confidence            12357999999999999987643

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.92  E-value=6.6e-24  Score=173.40  Aligned_cols=217  Identities=20%  Similarity=0.183  Sum_probs=145.8

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc-CccEEEEe
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-GCKGVFHV   87 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-~~d~vi~~   87 (278)
                      +|++|||||||+||++++++|++.|+ .|+++.|++.....+.........++.++.+|++|++++.+++. ++|+|||+
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~   80 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNN   80 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEEC
Confidence            46899999999999999999999999 88888887544332221111111268899999999999998887 89999999


Q ss_pred             cccCCCC----CCCCchhhhhhhHHhHHHHHHH----HHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhc
Q 023689           88 ASPCTLE----DPVDPEKELILPAVQGTLNVLE----AAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKS  159 (278)
Q Consensus        88 a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~----~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~  159 (278)
                      ||.....    ...+.++..+++|+.++.++.+    .+++.+.++||++||..+..+.+.                   
T Consensus        81 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~-------------------  141 (257)
T PRK09291         81 AGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITGPF-------------------  141 (257)
T ss_pred             CCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCCCC-------------------
Confidence            9865431    2233456788999888776555    445566789999999766443222                   


Q ss_pred             cCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHHHHHH
Q 023689          160 RKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAK  236 (278)
Q Consensus       160 ~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  236 (278)
                       ...|+.+|.+.|.+.+.++..   .|++++++|||.+.++...........+........+........+.+.++|+++
T Consensus       142 -~~~Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (257)
T PRK09291        142 -TGAYCASKHALEAIAEAMHAELKPFGIQVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDPEDLAFPLEQFDPQEMID  220 (257)
T ss_pred             -cchhHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccchhhhhhhhhhhcchhhHHHhhhhhhccccCCCHHHHHH
Confidence             157999999999888776653   5999999999988665422111000000000000000000112335578999999


Q ss_pred             HHHhhhcCCC
Q 023689          237 AQVLLFESPA  246 (278)
Q Consensus       237 ~~~~~~~~~~  246 (278)
                      .++.++.++.
T Consensus       221 ~~~~~l~~~~  230 (257)
T PRK09291        221 AMVEVIPADT  230 (257)
T ss_pred             HHHHHhcCCC
Confidence            9998886543

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.92  E-value=2.3e-23  Score=169.79  Aligned_cols=220  Identities=17%  Similarity=0.160  Sum_probs=154.3

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCCCCCCceEEEEccCCChhhHHHHhc---
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE---   79 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~---   79 (278)
                      |..+++|++|||||+|+||++++++|+++|+ +|++..|+.+..+.+.. +.... .++.++.+|++|++++.++++   
T Consensus         4 ~~~~~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~~~   81 (253)
T PRK05867          4 LFDLHGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSG-GKVVPVCCDVSQHQQVTSMLDQVT   81 (253)
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcC-CeEEEEEccCCCHHHHHHHHHHHH
Confidence            3456789999999999999999999999999 88888887654333321 11111 268899999999998888765   


Q ss_pred             ----CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHh----cC-CCEEEEecceeeeecCCCCCCccc
Q 023689           80 ----GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FG-VRRVVVTSSISAIVPNPGWKGKVF  146 (278)
Q Consensus        80 ----~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~----~~-~~~~v~~Ss~~~~~~~~~~~~~~~  146 (278)
                          ++|++||+||.....    ...+.++..+++|+.++..+++++..    .+ .+++|++||..+......      
T Consensus        82 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~------  155 (253)
T PRK05867         82 AELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVP------  155 (253)
T ss_pred             HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCC------
Confidence                689999999875432    22345677889999999988887743    22 357999988665321100      


Q ss_pred             cCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccc
Q 023689          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (278)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (278)
                                  .....|+.+|.+.+.+.+.++.+   +|+++++++||.+-++.....    ...........+     
T Consensus       156 ------------~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~----~~~~~~~~~~~~-----  214 (253)
T PRK05867        156 ------------QQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPY----TEYQPLWEPKIP-----  214 (253)
T ss_pred             ------------CCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccc----hHHHHHHHhcCC-----
Confidence                        00146999999999998888765   489999999999988864322    111122222222     


Q ss_pred             cccCcccHHHHHHHHHhhhcCCC--CCceEEe
Q 023689          224 HWLGAVPVKDVAKAQVLLFESPA--ASGRYLC  253 (278)
Q Consensus       224 ~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~  253 (278)
                       ...+..++|+|+++++++....  ..|..+.
T Consensus       215 -~~r~~~p~~va~~~~~L~s~~~~~~tG~~i~  245 (253)
T PRK05867        215 -LGRLGRPEELAGLYLYLASEASSYMTGSDIV  245 (253)
T ss_pred             -CCCCcCHHHHHHHHHHHcCcccCCcCCCeEE
Confidence             2346789999999999986533  2454433

>PRK08264 short chain dehydrogenase; Validated

Probab=99.91  E-value=3.7e-23  Score=167.05  Aligned_cols=192  Identities=22%  Similarity=0.191  Sum_probs=145.8

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc---C
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---G   80 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---~   80 (278)
                      |++.+++++|||||+|+||+++++.|+++|++.|++..|+.+....      .. .+++++.+|+.|.+++.++++   .
T Consensus         1 ~~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~------~~-~~~~~~~~D~~~~~~~~~~~~~~~~   73 (238)
T PRK08264          1 MMDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD------LG-PRVVPLQLDVTDPASVAAAAEAASD   73 (238)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh------cC-CceEEEEecCCCHHHHHHHHHhcCC
Confidence            3446678999999999999999999999998578888887654332      11 278999999999999988877   4


Q ss_pred             ccEEEEecccCC-C----CCCCCchhhhhhhHHhHHHHHHHHHH----hcCCCEEEEecceeeeecCCCCCCccccCCCC
Q 023689           81 CKGVFHVASPCT-L----EDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (278)
Q Consensus        81 ~d~vi~~a~~~~-~----~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~  151 (278)
                      +|+|||+|+... .    ....+.+...+++|+.++.++++++.    +.+.++||++||..++.+.+.           
T Consensus        74 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~-----------  142 (238)
T PRK08264         74 VTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPN-----------  142 (238)
T ss_pred             CCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCCC-----------
Confidence            799999998732 2    22335567789999999999988864    456678999998766544332           


Q ss_pred             CchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCc
Q 023689          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (278)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (278)
                               ...|+.+|...+.+.+.++.+   .+++++++||+.+.++.....                      ....
T Consensus       143 ---------~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~~----------------------~~~~  191 (238)
T PRK08264        143 ---------LGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAGL----------------------DAPK  191 (238)
T ss_pred             ---------chHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccccccC----------------------CcCC
Confidence                     157999999999998888765   389999999999987752211                      0114


Q ss_pred             ccHHHHHHHHHhhhcC
Q 023689          229 VPVKDVAKAQVLLFES  244 (278)
Q Consensus       229 i~~~D~a~~~~~~~~~  244 (278)
                      +.++|+++.++..+..
T Consensus       192 ~~~~~~a~~~~~~~~~  207 (238)
T PRK08264        192 ASPADVARQILDALEA  207 (238)
T ss_pred             CCHHHHHHHHHHHHhC
Confidence            6778888888777765

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.91  E-value=2.7e-23  Score=169.98  Aligned_cols=213  Identities=20%  Similarity=0.182  Sum_probs=153.6

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      ++++|++|||||+|+||++++++|+++|+ .|+...|+.+..+.... +.... .++.++.+|++|+++++++++     
T Consensus         9 ~~~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~-~~~~~~~~Dl~d~~~i~~~~~~~~~~   86 (259)
T PRK08213          9 DLSGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALG-IDALWIAADVADEADIERLAEETLER   86 (259)
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcC-CeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            45679999999999999999999999999 88888886644332221 11111 267889999999999877664     


Q ss_pred             --CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHHHhc-----CCCEEEEecceeeeecCCCCCCccccC
Q 023689           80 --GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKRF-----GVRRVVVTSSISAIVPNPGWKGKVFDE  148 (278)
Q Consensus        80 --~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~-----~~~~~v~~Ss~~~~~~~~~~~~~~~~E  148 (278)
                        ++|+|||+|+....    ....+.++..+++|+.++.++++++.+.     +.++||++||..++++.+..       
T Consensus        87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~-------  159 (259)
T PRK08213         87 FGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPE-------  159 (259)
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCcc-------
Confidence              57999999986432    2223456778999999999999987554     56789999997666543221       


Q ss_pred             CCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccc
Q 023689          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (278)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (278)
                               ......|+.+|.+.+.+++.++++   +|+++++++|+.+.++.....   .......+..+.+.      
T Consensus       160 ---------~~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~---~~~~~~~~~~~~~~------  221 (259)
T PRK08213        160 ---------VMDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGT---LERLGEDLLAHTPL------  221 (259)
T ss_pred             ---------ccCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhh---hHHHHHHHHhcCCC------
Confidence                     011257999999999999998875   389999999999987754322   22333343333332      


Q ss_pred             cCcccHHHHHHHHHhhhcCC
Q 023689          226 LGAVPVKDVAKAQVLLFESP  245 (278)
Q Consensus       226 ~~~i~~~D~a~~~~~~~~~~  245 (278)
                      ..+..++|+|..+.+++...
T Consensus       222 ~~~~~~~~va~~~~~l~~~~  241 (259)
T PRK08213        222 GRLGDDEDLKGAALLLASDA  241 (259)
T ss_pred             CCCcCHHHHHHHHHHHhCcc
Confidence            33457899999988887653

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.7e-23  Score=171.56  Aligned_cols=205  Identities=19%  Similarity=0.168  Sum_probs=149.6

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc-------C
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~   80 (278)
                      |+++|||||+|+||++++++|+++|+ .|++++|+....+.+. .+.... .++.++.+|++|++++.++++       +
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   78 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLASLAQELADHG-GEALVVPTDVSDAEACERLIEAAVARFGG   78 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            47899999999999999999999999 8999988764432221 111112 278899999999998888776       5


Q ss_pred             ccEEEEecccCCCCC-----CCCchhhhhhhHHhHHHHHHHHHHh---cCCCEEEEecceeeeecCCCCCCccccCCCCC
Q 023689           81 CKGVFHVASPCTLED-----PVDPEKELILPAVQGTLNVLEAAKR---FGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (278)
Q Consensus        81 ~d~vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~ll~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~  152 (278)
                      +|+|||+|+......     ..+.+.+.+++|+.++.++++.+.+   .+.+++|++||..++.+.++.           
T Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-----------  147 (263)
T PRK06181         79 IDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGVPTR-----------  147 (263)
T ss_pred             CCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCCCCc-----------
Confidence            799999998755421     1223567799999999999998853   234789999997776544332           


Q ss_pred             chhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCc-ccccccCc
Q 023689          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT-QEYHWLGA  228 (278)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  228 (278)
                               ..|+.+|...+.+.+.++.+   +++++++++||.+.++........         .+.+.. .+....++
T Consensus       148 ---------~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~---------~~~~~~~~~~~~~~~  209 (263)
T PRK06181        148 ---------SGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRALDG---------DGKPLGKSPMQESKI  209 (263)
T ss_pred             ---------cHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhhccc---------cccccccccccccCC
Confidence                     57999999999888777643   589999999999988754321100         011111 11123478


Q ss_pred             ccHHHHHHHHHhhhcC
Q 023689          229 VPVKDVAKAQVLLFES  244 (278)
Q Consensus       229 i~~~D~a~~~~~~~~~  244 (278)
                      ++++|+|++++.+++.
T Consensus       210 ~~~~dva~~i~~~~~~  225 (263)
T PRK06181        210 MSAEECAEAILPAIAR  225 (263)
T ss_pred             CCHHHHHHHHHHHhhC
Confidence            9999999999999975

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.91  E-value=6.8e-23  Score=168.26  Aligned_cols=212  Identities=20%  Similarity=0.200  Sum_probs=151.6

Q ss_pred             CccccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc-
Q 023689            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-   79 (278)
Q Consensus         1 m~~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-   79 (278)
                      |+++..+++|++|||||+|+||++++++|.++|+ .|++..++......         .++.++++|++|++++.++++ 
T Consensus         1 ~~~~~~l~~k~vlItG~s~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~---------~~~~~~~~D~~~~~~~~~~~~~   70 (266)
T PRK06171          1 MQDWLNLQGKIIIVTGGSSGIGLAIVKELLANGA-NVVNADIHGGDGQH---------ENYQFVPTDVSSAEEVNHTVAE   70 (266)
T ss_pred             CcccccCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcccccc---------CceEEEEccCCCHHHHHHHHHH
Confidence            6666677889999999999999999999999999 88888876543221         167889999999998888765 


Q ss_pred             ------CccEEEEecccCCCC-------------CCCCchhhhhhhHHhHHHHHHHHHHh----cCCCEEEEecceeeee
Q 023689           80 ------GCKGVFHVASPCTLE-------------DPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIV  136 (278)
Q Consensus        80 ------~~d~vi~~a~~~~~~-------------~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~v~~Ss~~~~~  136 (278)
                            .+|++||+||.....             ...++++..+++|+.++..+++++.+    .+.+++|++||..+..
T Consensus        71 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~  150 (266)
T PRK06171         71 IIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLE  150 (266)
T ss_pred             HHHHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccC
Confidence                  479999999864321             12345677899999999999888754    3456899999977755


Q ss_pred             cCCCCCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceee-CCCCCCCCc--------
Q 023689          137 PNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCL-GPLMQPYLN--------  204 (278)
Q Consensus       137 ~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~-g~~~~~~~~--------  204 (278)
                      +.++.                    ..|+.+|.+.+.+.+.++.+   +|+++++++||.+. ++.......        
T Consensus       151 ~~~~~--------------------~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~  210 (266)
T PRK06171        151 GSEGQ--------------------SCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRG  210 (266)
T ss_pred             CCCCC--------------------chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccC
Confidence            43332                    57999999999988888765   48999999999885 332211000        


Q ss_pred             -hhHHHHHHHhhCCCCcccccccCcccHHHHHHHHHhhhcCCC
Q 023689          205 -ASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA  246 (278)
Q Consensus       205 -~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~  246 (278)
                       .............  ..  ....+..++|+|.++.+++....
T Consensus       211 ~~~~~~~~~~~~~~--~~--p~~r~~~~~eva~~~~fl~s~~~  249 (266)
T PRK06171        211 ITVEQLRAGYTKTS--TI--PLGRSGKLSEVADLVCYLLSDRA  249 (266)
T ss_pred             CCHHHHHhhhcccc--cc--cCCCCCCHHHhhhheeeeecccc
Confidence             0011111111100  01  13456788999999999987543

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.91  E-value=2.4e-23  Score=171.61  Aligned_cols=198  Identities=20%  Similarity=0.131  Sum_probs=145.8

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc-------
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------   79 (278)
                      +++|++|||||||+||++++++|.++|+ .|++..|+++..+.......    +++++.+|++|++++.++++       
T Consensus         3 ~~~~~ilVtGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~~   77 (273)
T PRK07825          3 LRGKVVAITGGARGIGLATARALAALGA-RVAIGDLDEALAKETAAELG----LVVGGPLDVTDPASFAAFLDAVEADLG   77 (273)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhc----cceEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4568999999999999999999999999 88888887654433221111    47789999999998777664       


Q ss_pred             CccEEEEecccCCCCC----CCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccCCCC
Q 023689           80 GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (278)
Q Consensus        80 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~  151 (278)
                      ++|++||+||......    ..+.+...+++|+.++.++++++    ++.+.++||++||.++..+.++.          
T Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----------  147 (273)
T PRK07825         78 PIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGM----------  147 (273)
T ss_pred             CCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCCC----------
Confidence            4799999999754321    22356778999998888766655    45677899999998776544332          


Q ss_pred             CchhhhhccCchhhhHHHHHHHHHHHHHH---hcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCc
Q 023689          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (278)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (278)
                                ..|+.+|...+.+.+.++.   ..|+++++++|+.+.++.....            .+      .....+
T Consensus       148 ----------~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~------------~~------~~~~~~  199 (273)
T PRK07825        148 ----------ATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGT------------GG------AKGFKN  199 (273)
T ss_pred             ----------cchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhccc------------cc------ccCCCC
Confidence                      5699999888776666554   3599999999999876642211            00      012357


Q ss_pred             ccHHHHHHHHHhhhcCCCC
Q 023689          229 VPVKDVAKAQVLLFESPAA  247 (278)
Q Consensus       229 i~~~D~a~~~~~~~~~~~~  247 (278)
                      ++++|+|+.++.++.++..
T Consensus       200 ~~~~~va~~~~~~l~~~~~  218 (273)
T PRK07825        200 VEPEDVAAAIVGTVAKPRP  218 (273)
T ss_pred             CCHHHHHHHHHHHHhCCCC
Confidence            8999999999999987544

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.91  E-value=3.4e-23  Score=172.51  Aligned_cols=219  Identities=22%  Similarity=0.127  Sum_probs=156.3

Q ss_pred             CccccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc-
Q 023689            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-   79 (278)
Q Consensus         1 m~~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-   79 (278)
                      |..|..+++|++|||||+|+||.++++.|.++|+ .|++..|+.+..+.+....+.. ..+..+.+|++|.+++.++++ 
T Consensus         1 ~~~~~~l~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~-~~~~~~~~Dv~d~~~v~~~~~~   78 (296)
T PRK05872          1 GPPMTSLAGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGGD-DRVLTVVADVTDLAAMQAAAEE   78 (296)
T ss_pred             CCCCCCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCC-CcEEEEEecCCCHHHHHHHHHH
Confidence            3456677889999999999999999999999999 8888888765433332211111 256777899999998887764 


Q ss_pred             ------CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHhc---CCCEEEEecceeeeecCCCCCCccc
Q 023689           80 ------GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKVF  146 (278)
Q Consensus        80 ------~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~v~~Ss~~~~~~~~~~~~~~~  146 (278)
                            ++|+|||+||.....    ...+.++..+++|+.++.++++++...   ..++||++||..++.+.++.     
T Consensus        79 ~~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----  153 (296)
T PRK05872         79 AVERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAAPGM-----  153 (296)
T ss_pred             HHHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCCCCc-----
Confidence                  579999999975431    223456788999999999998887432   23689999997776544332     


Q ss_pred             cCCCCCchhhhhccCchhhhHHHHHHHHHHHHHH---hcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccc
Q 023689          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (278)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (278)
                                     ..|+.+|...+.+.+.++.   ..|+.+++++||.+.++......... .....+....+.    
T Consensus       154 ---------------~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~-~~~~~~~~~~~~----  213 (296)
T PRK05872        154 ---------------AAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADL-PAFRELRARLPW----  213 (296)
T ss_pred             ---------------hHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccc-hhHHHHHhhCCC----
Confidence                           5799999999988887774   35899999999999887543321110 111222221111    


Q ss_pred             cccCcccHHHHHHHHHhhhcCCC
Q 023689          224 HWLGAVPVKDVAKAQVLLFESPA  246 (278)
Q Consensus       224 ~~~~~i~~~D~a~~~~~~~~~~~  246 (278)
                      ....+++++|+|++++.++.+..
T Consensus       214 p~~~~~~~~~va~~i~~~~~~~~  236 (296)
T PRK05872        214 PLRRTTSVEKCAAAFVDGIERRA  236 (296)
T ss_pred             cccCCCCHHHHHHHHHHHHhcCC
Confidence            13456799999999999987643

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.91  E-value=3.3e-23  Score=168.01  Aligned_cols=209  Identities=17%  Similarity=0.124  Sum_probs=147.2

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc----
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~----   79 (278)
                      |.++++|++|||||+|+||+++++.|+++|+ .|+...|+.+..+.+....  + .+++++.+|++|.+++.++++    
T Consensus         1 ~~~~~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~--~-~~~~~~~~D~~~~~~~~~~~~~~~~   76 (245)
T PRK12936          1 MFDLSGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAEL--G-ERVKIFPANLSDRDEVKALGQKAEA   76 (245)
T ss_pred             CcCCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHh--C-CceEEEEccCCCHHHHHHHHHHHHH
Confidence            3345678999999999999999999999999 8887777654433222111  1 168899999999998887754    


Q ss_pred             ---CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHH----hcCCCEEEEecceeeeecCCCCCCccccC
Q 023689           80 ---GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (278)
Q Consensus        80 ---~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E  148 (278)
                         ++|+|||+|+.....    ...++++..+++|+.++.++++++.    +.+.++||++||..+.++.+..       
T Consensus        77 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-------  149 (245)
T PRK12936         77 DLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPGQ-------  149 (245)
T ss_pred             HcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCCC-------
Confidence               589999999875431    1234667889999999988888764    2456789999997776654432       


Q ss_pred             CCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccc
Q 023689          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (278)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (278)
                                   ..|+.+|...+.+.+.++++   .++++++++|+.+.++......   ...........+      .
T Consensus       150 -------------~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~---~~~~~~~~~~~~------~  207 (245)
T PRK12936        150 -------------ANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLN---DKQKEAIMGAIP------M  207 (245)
T ss_pred             -------------cchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccC---hHHHHHHhcCCC------C
Confidence                         45888888777666666543   4899999999988776533221   111111111111      3


Q ss_pred             cCcccHHHHHHHHHhhhcCC
Q 023689          226 LGAVPVKDVAKAQVLLFESP  245 (278)
Q Consensus       226 ~~~i~~~D~a~~~~~~~~~~  245 (278)
                      ..+.+++|+++++.+++...
T Consensus       208 ~~~~~~~~ia~~~~~l~~~~  227 (245)
T PRK12936        208 KRMGTGAEVASAVAYLASSE  227 (245)
T ss_pred             CCCcCHHHHHHHHHHHcCcc
Confidence            44678999999998887653

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.91  E-value=6e-23  Score=166.67  Aligned_cols=207  Identities=21%  Similarity=0.214  Sum_probs=147.5

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCC-Cccc-ccCCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHL-FALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~-~~~~-~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      +++|++|||||||+||+++++.|+++|+ .|+++.|+... .... ..+.... .++.++.+|++|.+++.++++     
T Consensus         3 ~~~~~vlItG~sg~iG~~l~~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (248)
T PRK05557          3 LEGKVALVTGASRGIGRAIAERLAAQGA-NVVINYASSEAGAEALVAEIGALG-GKALAVQGDVSDAESVERAVDEAKAE   80 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHHHHHHhcC-CceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3568999999999999999999999999 77667665432 1111 1111111 278899999999998888765     


Q ss_pred             --CccEEEEecccCCCCC----CCCchhhhhhhHHhHHHHHHHHHHh----cCCCEEEEecceeeeecCCCCCCccccCC
Q 023689           80 --GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (278)
Q Consensus        80 --~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~  149 (278)
                        ++|+|||+|+......    ..+.+...+.+|+.++.++++++..    .+.++||++||..+.++.+..        
T Consensus        81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~~--------  152 (248)
T PRK05557         81 FGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQ--------  152 (248)
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCCC--------
Confidence              5799999998754321    2234567788999999999888864    356789999997776654332        


Q ss_pred             CCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccccc
Q 023689          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (278)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (278)
                                  ..|+.+|.+.+.+++.++++   .++++++++||.+.++.....   ............+      ..
T Consensus       153 ------------~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~---~~~~~~~~~~~~~------~~  211 (248)
T PRK05557        153 ------------ANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDAL---PEDVKEAILAQIP------LG  211 (248)
T ss_pred             ------------chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCcccccc---ChHHHHHHHhcCC------CC
Confidence                        56999999999888777653   489999999998877653322   1222222222222      23


Q ss_pred             CcccHHHHHHHHHhhhcC
Q 023689          227 GAVPVKDVAKAQVLLFES  244 (278)
Q Consensus       227 ~~i~~~D~a~~~~~~~~~  244 (278)
                      .+++++|+|+++..++..
T Consensus       212 ~~~~~~~va~~~~~l~~~  229 (248)
T PRK05557        212 RLGQPEEIASAVAFLASD  229 (248)
T ss_pred             CCcCHHHHHHHHHHHcCc
Confidence            467999999999888765

>PRK09186 flagellin modification protein A; Provisional

Probab=99.91  E-value=3.9e-23  Score=168.71  Aligned_cols=222  Identities=20%  Similarity=0.213  Sum_probs=149.4

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCC-CCCCceEEEEccCCChhhHHHHhcC-----
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPG-AGDANLRVFEADVLDSGAVSRAVEG-----   80 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~-~~~~~v~~~~~Dl~d~~~~~~~~~~-----   80 (278)
                      ++|++|||||+|+||++++++|.++|+ .|++..|+++..+... .+.. .....+.++.+|++|++++.++++.     
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   81 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY   81 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            468999999999999999999999999 8888888765533221 1111 0111567889999999999888763     


Q ss_pred             --ccEEEEecccCCC-------CCCCCchhhhhhhHHhHHHHHHH----HHHhcCCCEEEEecceeeeecCCCCCCcccc
Q 023689           81 --CKGVFHVASPCTL-------EDPVDPEKELILPAVQGTLNVLE----AAKRFGVRRVVVTSSISAIVPNPGWKGKVFD  147 (278)
Q Consensus        81 --~d~vi~~a~~~~~-------~~~~~~~~~~~~~n~~~~~~ll~----~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~  147 (278)
                        +|+|||+|+....       +...+.+...+++|+.++..+++    ++++.+.++||++||..+++....    ...
T Consensus        82 ~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----~~~  157 (256)
T PRK09186         82 GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKF----EIY  157 (256)
T ss_pred             CCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccc----hhc
Confidence              7999999975321       12224467778889877665555    445566789999999776543211    111


Q ss_pred             CCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccc
Q 023689          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (278)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (278)
                      |+.+..      ....|+.+|...+.+.+.++.+   .++++++++||.++++...       .+........+      
T Consensus       158 ~~~~~~------~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~-------~~~~~~~~~~~------  218 (256)
T PRK09186        158 EGTSMT------SPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPE-------AFLNAYKKCCN------  218 (256)
T ss_pred             cccccC------CcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCH-------HHHHHHHhcCC------
Confidence            211111      1136999999999998877764   4899999999998865411       11122211111      


Q ss_pred             ccCcccHHHHHHHHHhhhcCCCC--CceEEe
Q 023689          225 WLGAVPVKDVAKAQVLLFESPAA--SGRYLC  253 (278)
Q Consensus       225 ~~~~i~~~D~a~~~~~~~~~~~~--~~~~~~  253 (278)
                      ...+++++|+|+++++++.+...  .|.++.
T Consensus       219 ~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~  249 (256)
T PRK09186        219 GKGMLDPDDICGTLVFLLSDQSKYITGQNII  249 (256)
T ss_pred             ccCCCCHHHhhhhHhheeccccccccCceEE
Confidence            24578999999999999976432  355443

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.91  E-value=2.9e-23  Score=167.89  Aligned_cols=193  Identities=20%  Similarity=0.179  Sum_probs=147.1

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcC----ccEE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG----CKGV   84 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~----~d~v   84 (278)
                      |++++||||||+||++++++|+++|+ +|+++.|+++..+.+...   .. ++.++++|++|++++.++++.    .|.+
T Consensus         1 ~~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~---~~-~~~~~~~D~~~~~~~~~~~~~~~~~~d~~   75 (240)
T PRK06101          1 MTAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHTQ---SA-NIFTLAFDVTDHPGTKAALSQLPFIPELW   75 (240)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHh---cC-CCeEEEeeCCCHHHHHHHHHhcccCCCEE
Confidence            47899999999999999999999999 899998876543333221   11 688999999999999998875    5899


Q ss_pred             EEecccCCC-C---CCCCchhhhhhhHHhHHHHHHHHHHhc--CCCEEEEecceeeeecCCCCCCccccCCCCCchhhhh
Q 023689           85 FHVASPCTL-E---DPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCK  158 (278)
Q Consensus        85 i~~a~~~~~-~---~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~  158 (278)
                      +|+||.... .   ...+.++..+++|+.++.++++++...  +.+++|++||..+.++.+..                 
T Consensus        76 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~-----------------  138 (240)
T PRK06101         76 IFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELALPRA-----------------  138 (240)
T ss_pred             EEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccCCCCC-----------------
Confidence            999985432 1   122345778999999999999998763  33579999987765543332                 


Q ss_pred             ccCchhhhHHHHHHHHHHHHHH---hcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHHHHH
Q 023689          159 SRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVA  235 (278)
Q Consensus       159 ~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  235 (278)
                         ..|+.+|...+.+.+.++.   .+|++++++|||.++++......           ..        ....++++|+|
T Consensus       139 ---~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~~-----------~~--------~~~~~~~~~~a  196 (240)
T PRK06101        139 ---EAYGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDKNT-----------FA--------MPMIITVEQAS  196 (240)
T ss_pred             ---chhhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCCC-----------CC--------CCcccCHHHHH
Confidence               5799999999998887763   45999999999999998643210           00        11247899999


Q ss_pred             HHHHhhhcCC
Q 023689          236 KAQVLLFESP  245 (278)
Q Consensus       236 ~~~~~~~~~~  245 (278)
                      +.++..+++.
T Consensus       197 ~~i~~~i~~~  206 (240)
T PRK06101        197 QEIRAQLARG  206 (240)
T ss_pred             HHHHHHHhcC
Confidence            9999999874

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.91  E-value=3.4e-23  Score=168.73  Aligned_cols=209  Identities=15%  Similarity=0.167  Sum_probs=144.7

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEe-cCCCCCccc-ccCCCCCCCceEEEEccCCChhhHHHHhc------
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATV-FPGSDSSHL-FALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~-r~~~~~~~~-~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~------   79 (278)
                      ++|++|||||+|+||++++++|.+.|+ .|++.. ++.+..+.. ..+.... ..+..+.+|+++.+++..+++      
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEEAEETVYEIQSNG-GSAFSIGANLESLHGVEALYSSLDNEL   80 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHHHhcC-CceEEEecccCCHHHHHHHHHHHHHHh
Confidence            468999999999999999999999999 777654 333322211 1111111 157788999999876655432      


Q ss_pred             -------CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHhc--CCCEEEEecceeeeecCCCCCCccc
Q 023689           80 -------GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVF  146 (278)
Q Consensus        80 -------~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~  146 (278)
                             ++|++||+||.....    ...+.++..+++|+.++..+++++.+.  ..+++|++||..+..+.+..     
T Consensus        81 ~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----  155 (252)
T PRK12747         81 QNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDF-----  155 (252)
T ss_pred             hhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCCCCc-----
Confidence                   589999999964321    122346888899999999999877553  23689999998775443321     


Q ss_pred             cCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccc
Q 023689          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (278)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (278)
                                     ..|+.+|.+.+.+.+.++.+   +|+++++++||.|.++........  ...........     
T Consensus       156 ---------------~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~-----  213 (252)
T PRK12747        156 ---------------IAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSD--PMMKQYATTIS-----  213 (252)
T ss_pred             ---------------hhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccC--HHHHHHHHhcC-----
Confidence                           57999999999998888765   489999999999999864322110  11111111110     


Q ss_pred             cccCcccHHHHHHHHHhhhcCC
Q 023689          224 HWLGAVPVKDVAKAQVLLFESP  245 (278)
Q Consensus       224 ~~~~~i~~~D~a~~~~~~~~~~  245 (278)
                      ....+.+++|+|+++.+++...
T Consensus       214 ~~~~~~~~~dva~~~~~l~s~~  235 (252)
T PRK12747        214 AFNRLGEVEDIADTAAFLASPD  235 (252)
T ss_pred             cccCCCCHHHHHHHHHHHcCcc
Confidence            1345789999999999987643

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.91  E-value=2.6e-23  Score=174.98  Aligned_cols=210  Identities=18%  Similarity=0.136  Sum_probs=150.5

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc---
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE---   79 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---   79 (278)
                      |+.+++|++|||||||+||++++++|.++|+ +|++..|+.+..+.+. .+...+. ++.++.+|++|+++++++++   
T Consensus         2 ~~~l~~k~vlITGAs~GIG~aia~~la~~G~-~Vvl~~R~~~~l~~~~~~~~~~g~-~~~~~~~Dv~d~~~v~~~~~~~~   79 (330)
T PRK06139          2 MGPLHGAVVVITGASSGIGQATAEAFARRGA-RLVLAARDEEALQAVAEECRALGA-EVLVVPTDVTDADQVKALATQAA   79 (330)
T ss_pred             CcCCCCCEEEEcCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCC-cEEEEEeeCCCHHHHHHHHHHHH
Confidence            4456789999999999999999999999999 8888888765433222 1111122 67889999999999888774   


Q ss_pred             ----CccEEEEecccCCCCC----CCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCcccc
Q 023689           80 ----GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFD  147 (278)
Q Consensus        80 ----~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~  147 (278)
                          .+|++|||||......    ..+.++..+++|+.++.++.+++    ++++.+++|++||..++.+.+..      
T Consensus        80 ~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p~~------  153 (330)
T PRK06139         80 SFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPYA------  153 (330)
T ss_pred             HhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCCCc------
Confidence                5799999998654422    22455778999999888877665    45556789999997765544332      


Q ss_pred             CCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh----cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccc
Q 023689          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK----HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (278)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~----~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (278)
                                    ..|+.+|.....+.+.++.+    .+++++.+.||.+.++........         .+...   .
T Consensus       154 --------------~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~---------~~~~~---~  207 (330)
T PRK06139        154 --------------AAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANY---------TGRRL---T  207 (330)
T ss_pred             --------------hhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccccccc---------ccccc---c
Confidence                          56999999777666666543    389999999999999864322100         00000   0


Q ss_pred             cccCcccHHHHHHHHHhhhcCCCC
Q 023689          224 HWLGAVPVKDVAKAQVLLFESPAA  247 (278)
Q Consensus       224 ~~~~~i~~~D~a~~~~~~~~~~~~  247 (278)
                      .....++++|+|++++.++.++..
T Consensus       208 ~~~~~~~pe~vA~~il~~~~~~~~  231 (330)
T PRK06139        208 PPPPVYDPRRVAKAVVRLADRPRA  231 (330)
T ss_pred             CCCCCCCHHHHHHHHHHHHhCCCC
Confidence            123467999999999999987543

>PRK08643 acetoin reductase; Validated

Probab=99.91  E-value=4.9e-23  Score=168.15  Aligned_cols=217  Identities=20%  Similarity=0.218  Sum_probs=150.1

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCCCCCCceEEEEccCCChhhHHHHhc-------C
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~   80 (278)
                      +|++|||||+|+||+++++.|+++|+ .|+++.|+.+....+.. +..... ++.++++|++|++++.++++       +
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   79 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAAADKLSKDGG-KAIAVKADVSDRDQVFAAVRQVVDTFGD   79 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC-eEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            57999999999999999999999999 88888887654333221 111122 68889999999998888765       5


Q ss_pred             ccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHh----cC-CCEEEEecceeeeecCCCCCCccccCCCC
Q 023689           81 CKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FG-VRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (278)
Q Consensus        81 ~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~----~~-~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~  151 (278)
                      +|+|||+||.....    ...+.++..+++|+.++..+++++.+    .+ .+++|++||..+.++.++.          
T Consensus        80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~----------  149 (256)
T PRK08643         80 LNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPEL----------  149 (256)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCCC----------
Confidence            79999999864431    12345678899999998877766643    22 3689999997776554332          


Q ss_pred             CchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCC-------chhHHH-HHHHhhCCCCc
Q 023689          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYL-------NASCAV-LQQLLQGSKDT  220 (278)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~-------~~~~~~-~~~~~~~~~~~  220 (278)
                                ..|+.+|...+.+.+.++.+   .|++++.++||.+.++......       .....+ ........+  
T Consensus       150 ----------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  217 (256)
T PRK08643        150 ----------AVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDIT--  217 (256)
T ss_pred             ----------chhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccCC--
Confidence                      57999999999888887764   5899999999999887532110       000000 111111111  


Q ss_pred             ccccccCcccHHHHHHHHHhhhcCCC--CCceEEe
Q 023689          221 QEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLC  253 (278)
Q Consensus       221 ~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~  253 (278)
                          ...+..++|+|.++.+++....  ..|..+.
T Consensus       218 ----~~~~~~~~~va~~~~~L~~~~~~~~~G~~i~  248 (256)
T PRK08643        218 ----LGRLSEPEDVANCVSFLAGPDSDYITGQTII  248 (256)
T ss_pred             ----CCCCcCHHHHHHHHHHHhCccccCccCcEEE
Confidence                2346789999999999986543  3455433

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.91  E-value=3.1e-23  Score=171.02  Aligned_cols=215  Identities=19%  Similarity=0.156  Sum_probs=150.3

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc-------Cc
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~   81 (278)
                      ||++|||||+|+||++++++|.++|+ .|+++.|+.+..+.+...      +++++.+|++|.+++.++++       ++
T Consensus         1 mk~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~------~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   73 (274)
T PRK05693          1 MPVVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEALAAA------GFTAVQLDVNDGAALARLAEELEAEHGGL   73 (274)
T ss_pred             CCEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHC------CCeEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            57999999999999999999999999 898888876543333221      57788999999988887764       57


Q ss_pred             cEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHh---cCCCEEEEecceeeeecCCCCCCccccCCCCCch
Q 023689           82 KGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR---FGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDL  154 (278)
Q Consensus        82 d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~  154 (278)
                      |+|||+||.....    ...++++..+++|+.++.++++++..   .+.+++|++||..+..+.+..             
T Consensus        74 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------------  140 (274)
T PRK05693         74 DVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVTPFA-------------  140 (274)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCCCCc-------------
Confidence            9999999865432    22345678899999999888887733   234689999997775543321             


Q ss_pred             hhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccc---------
Q 023689          155 EYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQE---------  222 (278)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~---------  222 (278)
                             ..|+.+|...+.+.+.++.+   +|+++++++||.+.++..........    ..........+         
T Consensus       141 -------~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~  209 (274)
T PRK05693        141 -------GAYCASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQFASNASREAE----QLLAEQSPWWPLREHIQARA  209 (274)
T ss_pred             -------cHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccccccccccccchh----hcCCCCCccHHHHHHHHHHH
Confidence                   57999999999888777654   69999999999998875432110000    00000000000         


Q ss_pred             -ccccCcccHHHHHHHHHhhhcCCCCCceEEec
Q 023689          223 -YHWLGAVPVKDVAKAQVLLFESPAASGRYLCT  254 (278)
Q Consensus       223 -~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~  254 (278)
                       ........++|+|+.++.++.++.....+..+
T Consensus       210 ~~~~~~~~~~~~~a~~i~~~~~~~~~~~~~~~g  242 (274)
T PRK05693        210 RASQDNPTPAAEFARQLLAAVQQSPRPRLVRLG  242 (274)
T ss_pred             HhccCCCCCHHHHHHHHHHHHhCCCCCceEEec
Confidence             00122468999999999999876554444443

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.91  E-value=4e-23  Score=169.33  Aligned_cols=211  Identities=16%  Similarity=0.100  Sum_probs=152.2

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      .+++|++|||||+|+||++++++|+++|+ +|+++.|+.+..+.+. .+.... .++.++.+|+++++++.++++     
T Consensus         7 ~~~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~   84 (263)
T PRK07814          7 RLDDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAG-RRAHVVAADLAHPEATAGLAGQAVEA   84 (263)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            45678999999999999999999999999 8998988765433221 111111 268899999999998887765     


Q ss_pred             --CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHHHh-----cCCCEEEEecceeeeecCCCCCCccccC
Q 023689           80 --GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKR-----FGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (278)
Q Consensus        80 --~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~-----~~~~~~v~~Ss~~~~~~~~~~~~~~~~E  148 (278)
                        ++|+|||+||....    +...+.+...+++|+.++.++.+++.+     .+.+++|++||..+..+.++        
T Consensus        85 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~--------  156 (263)
T PRK07814         85 FGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRG--------  156 (263)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCCC--------
Confidence              57999999986433    122345688899999999999999864     45678999999766544332        


Q ss_pred             CCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc--CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccccc
Q 023689          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (278)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (278)
                                  ...|+.+|.+.+.+.+.++.+.  +++++.++||.+.++....... ...+........+      ..
T Consensus       157 ------------~~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~~-~~~~~~~~~~~~~------~~  217 (263)
T PRK07814        157 ------------FAAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVVAA-NDELRAPMEKATP------LR  217 (263)
T ss_pred             ------------CchhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhccC-CHHHHHHHHhcCC------CC
Confidence                        1579999999999999888754  6899999999998774322100 1111112111111      23


Q ss_pred             CcccHHHHHHHHHhhhcCC
Q 023689          227 GAVPVKDVAKAQVLLFESP  245 (278)
Q Consensus       227 ~~i~~~D~a~~~~~~~~~~  245 (278)
                      .+..++|+|+++++++...
T Consensus       218 ~~~~~~~va~~~~~l~~~~  236 (263)
T PRK07814        218 RLGDPEDIAAAAVYLASPA  236 (263)
T ss_pred             CCcCHHHHHHHHHHHcCcc
Confidence            3568999999999998653

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.91  E-value=2.6e-23  Score=169.02  Aligned_cols=207  Identities=18%  Similarity=0.190  Sum_probs=145.4

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEec-CCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc-------C
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVF-PGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r-~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~   80 (278)
                      +++|||||+|+||++++++|+++|+ .|+...+ ++....... .+..... ++.++.+|++|.+++.++++       .
T Consensus         3 ~~~lVtG~~~~iG~~~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   80 (248)
T PRK06123          3 KVMIITGASRGIGAATALLAAERGY-AVCLNYLRNRDAAEAVVQAIRRQGG-EALAVAADVADEADVLRLFEAVDRELGR   80 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCC-eEEEecCCCHHHHHHHHHHHHhCCC-cEEEEEeccCCHHHHHHHHHHHHHHhCC
Confidence            6899999999999999999999998 5655543 322221111 1111112 67899999999998888776       5


Q ss_pred             ccEEEEecccCCCC-----CCCCchhhhhhhHHhHHHHHHHHHHhc----C---CCEEEEecceeeeecCCCCCCccccC
Q 023689           81 CKGVFHVASPCTLE-----DPVDPEKELILPAVQGTLNVLEAAKRF----G---VRRVVVTSSISAIVPNPGWKGKVFDE  148 (278)
Q Consensus        81 ~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~ll~~~~~~----~---~~~~v~~Ss~~~~~~~~~~~~~~~~E  148 (278)
                      +|+|||+|+.....     ...+++...+++|+.++.++++++.+.    +   .+++|++||.++.++.+..       
T Consensus        81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~-------  153 (248)
T PRK06123         81 LDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGE-------  153 (248)
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCC-------
Confidence            79999999875421     123456788999999999988877543    1   2469999998776654321       


Q ss_pred             CCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccc
Q 023689          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (278)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (278)
                                  ...|+.+|...+.+++.++.+.   |++++++||+.++|+.....  .............|      .
T Consensus       154 ------------~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~--~~~~~~~~~~~~~p------~  213 (248)
T PRK06123        154 ------------YIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASG--GEPGRVDRVKAGIP------M  213 (248)
T ss_pred             ------------ccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhcc--CCHHHHHHHHhcCC------C
Confidence                        1359999999999998888754   89999999999999964322  11222222222222      1


Q ss_pred             cCcccHHHHHHHHHhhhcCC
Q 023689          226 LGAVPVKDVAKAQVLLFESP  245 (278)
Q Consensus       226 ~~~i~~~D~a~~~~~~~~~~  245 (278)
                      ..+.+++|+++++++++...
T Consensus       214 ~~~~~~~d~a~~~~~l~~~~  233 (248)
T PRK06123        214 GRGGTAEEVARAILWLLSDE  233 (248)
T ss_pred             CCCcCHHHHHHHHHHHhCcc
Confidence            22357899999999988754

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=99.91  E-value=2.9e-23  Score=158.30  Aligned_cols=251  Identities=18%  Similarity=0.174  Sum_probs=187.2

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHC-CCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc--CccEE
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGV   84 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~-g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~v   84 (278)
                      +..+|||||+-|.+|..+++.|... |.+.|+..+-.+.......        .=.++..|+.|...+++++-  .+|.+
T Consensus        43 ~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V~~--------~GPyIy~DILD~K~L~eIVVn~RIdWL  114 (366)
T KOG2774|consen   43 KAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPANVTD--------VGPYIYLDILDQKSLEEIVVNKRIDWL  114 (366)
T ss_pred             CCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchhhcc--------cCCchhhhhhccccHHHhhccccccee
Confidence            4579999999999999999988765 6556665543332222211        23478899999999999874  68999


Q ss_pred             EEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchh
Q 023689           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWY  164 (278)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y  164 (278)
                      ||..+..+... +.+...+..+|+.|..|+++.+++++.+ +..-||++++++....  .+.+      ......+...|
T Consensus       115 ~HfSALLSAvG-E~NVpLA~~VNI~GvHNil~vAa~~kL~-iFVPSTIGAFGPtSPR--NPTP------dltIQRPRTIY  184 (366)
T KOG2774|consen  115 VHFSALLSAVG-ETNVPLALQVNIRGVHNILQVAAKHKLK-VFVPSTIGAFGPTSPR--NPTP------DLTIQRPRTIY  184 (366)
T ss_pred             eeHHHHHHHhc-ccCCceeeeecchhhhHHHHHHHHcCee-EeecccccccCCCCCC--CCCC------CeeeecCceee
Confidence            99998665433 3445678999999999999999999875 5555998888775433  1121      11233456789


Q ss_pred             hhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCC--CchhHHHH-HHHhhCCCCc--ccccccCcccHHHHHHHHH
Q 023689          165 PVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY--LNASCAVL-QQLLQGSKDT--QEYHWLGAVPVKDVAKAQV  239 (278)
Q Consensus       165 ~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~--~~~~~~~~-~~~~~~~~~~--~~~~~~~~i~~~D~a~~~~  239 (278)
                      |.||..+|.+-+.+..++|+++-++|++.++.......  .......+ .+..+|+-..  .|+.+.++.+.+||.++++
T Consensus       185 GVSKVHAEL~GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpmmy~~dc~~~~~  264 (366)
T KOG2774|consen  185 GVSKVHAELLGEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPMMYDTDCMASVI  264 (366)
T ss_pred             chhHHHHHHHHHHHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCceeehHHHHHHHH
Confidence            99999999999999999999999999888876533222  22333334 3444555433  2778999999999999999


Q ss_pred             hhhcCCCCC---ceEEecCccccHHHHHHHHHHhCCCCCC
Q 023689          240 LLFESPAAS---GRYLCTNGIYQFGDFAERVSKLFPEFPV  276 (278)
Q Consensus       240 ~~~~~~~~~---~~~~~~~~~~s~~e~~~~i~~~~~~~~~  276 (278)
                      .++..+...   .+|++.+-.++-.|+++.+.+..|++.+
T Consensus       265 ~~~~a~~~~lkrr~ynvt~~sftpee~~~~~~~~~p~~~i  304 (366)
T KOG2774|consen  265 QLLAADSQSLKRRTYNVTGFSFTPEEIADAIRRVMPGFEI  304 (366)
T ss_pred             HHHhCCHHHhhhheeeeceeccCHHHHHHHHHhhCCCcee
Confidence            998876543   3699999999999999999999987643

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.91  E-value=4e-23  Score=170.00  Aligned_cols=204  Identities=16%  Similarity=0.150  Sum_probs=147.0

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc-------Cc
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~   81 (278)
                      |++|||||+|+||++++++|.++|+ .|++.+|+.+..+... .+...+ .++.++++|++|++++.++++       ++
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i   78 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGW-RLALADVNEEGGEETLKLLREAG-GDGFYQRCDVRDYSQLTALAQACEEKWGGI   78 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            5799999999999999999999999 8888888765433221 121112 278899999999998888765       58


Q ss_pred             cEEEEecccCCCCC----CCCchhhhhhhHHhHHHHHHHH----HHhcCCCEEEEecceeeeecCCCCCCccccCCCCCc
Q 023689           82 KGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEA----AKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (278)
Q Consensus        82 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~----~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~  153 (278)
                      |+|||+||......    ..+.++..+++|+.++.++.++    +++++.+++|++||..++.+.+..            
T Consensus        79 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~------------  146 (270)
T PRK05650         79 DVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPAM------------  146 (270)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCCCc------------
Confidence            99999999754321    2235566789998877776655    456677899999997765543321            


Q ss_pred             hhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCch---hHHHHHHHhhCCCCcccccccC
Q 023689          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNA---SCAVLQQLLQGSKDTQEYHWLG  227 (278)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~  227 (278)
                              ..|+.+|.+.+.+.+.++.+   .|+++++++|+.+.++........   ....+....          ...
T Consensus       147 --------~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~----------~~~  208 (270)
T PRK05650        147 --------SSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGKLL----------EKS  208 (270)
T ss_pred             --------hHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHHHHHh----------hcC
Confidence                    57999999988877777765   489999999999998864432111   111111111          124


Q ss_pred             cccHHHHHHHHHhhhcCC
Q 023689          228 AVPVKDVAKAQVLLFESP  245 (278)
Q Consensus       228 ~i~~~D~a~~~~~~~~~~  245 (278)
                      +++++|+|+.++.++++.
T Consensus       209 ~~~~~~vA~~i~~~l~~~  226 (270)
T PRK05650        209 PITAADIADYIYQQVAKG  226 (270)
T ss_pred             CCCHHHHHHHHHHHHhCC
Confidence            579999999999999864

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.91  E-value=2.9e-23  Score=170.04  Aligned_cols=220  Identities=12%  Similarity=0.089  Sum_probs=150.5

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc------
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~------   79 (278)
                      +++|++|||||+|+||++++++|.++|+ +|++..|+.+..+... .+......++.++++|++|+++++++++      
T Consensus         6 l~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g   84 (263)
T PRK08339          6 LSGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIG   84 (263)
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhC
Confidence            5679999999999999999999999999 8888888755433222 1111111268899999999998888875      


Q ss_pred             CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHH----HHHHhcCCCEEEEecceeeeecCCCCCCccccCCCC
Q 023689           80 GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVL----EAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (278)
Q Consensus        80 ~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll----~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~  151 (278)
                      ++|++||+||....    +...++|+..+++|+.+...+.    +.+++++.+++|++||..+..+.+..          
T Consensus        85 ~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~~~----------  154 (263)
T PRK08339         85 EPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPNI----------  154 (263)
T ss_pred             CCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCCcc----------
Confidence            47999999986443    2234567888999977665554    44455666799999997765443321          


Q ss_pred             CchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCC-------c-hhHHHHHHHhhCCCCc
Q 023689          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYL-------N-ASCAVLQQLLQGSKDT  220 (278)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~-------~-~~~~~~~~~~~~~~~~  220 (278)
                                ..|+.+|...+.+.+.++.+   +|++++++.||.+.++......       . ........+....|  
T Consensus       155 ----------~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--  222 (263)
T PRK08339        155 ----------ALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIP--  222 (263)
T ss_pred             ----------hhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCC--
Confidence                      45888888888777777664   4899999999999887421100       0 00111112211111  


Q ss_pred             ccccccCcccHHHHHHHHHhhhcCCC--CCceEEe
Q 023689          221 QEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLC  253 (278)
Q Consensus       221 ~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~  253 (278)
                          ...+..++|+|+++.+++....  ..|..+.
T Consensus       223 ----~~r~~~p~dva~~v~fL~s~~~~~itG~~~~  253 (263)
T PRK08339        223 ----LGRLGEPEEIGYLVAFLASDLGSYINGAMIP  253 (263)
T ss_pred             ----cccCcCHHHHHHHHHHHhcchhcCccCceEE
Confidence                3456789999999999986533  3455443

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.91  E-value=7.5e-23  Score=166.76  Aligned_cols=207  Identities=16%  Similarity=0.121  Sum_probs=145.8

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEec-CCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcC-----
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVF-PGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG-----   80 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r-~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~-----   80 (278)
                      +++|++|||||+|+||+++++.|+++|+ +|++..+ +.+..+.+....  . .++.++++|++|++++.++++.     
T Consensus         3 l~~k~ilItGas~gIG~~la~~l~~~G~-~vv~~~~~~~~~~~~~~~~~--~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (253)
T PRK08642          3 ISEQTVLVTGGSRGLGAAIARAFAREGA-RVVVNYHQSEDAAEALADEL--G-DRAIALQADVTDREQVQAMFATATEHF   78 (253)
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHh--C-CceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            4568999999999999999999999999 6766544 332222221111  1 2788999999999988887753     


Q ss_pred             ---ccEEEEecccCCC----------CCCCCchhhhhhhHHhHHHHHHHHHH----hcCCCEEEEecceeeeecCCCCCC
Q 023689           81 ---CKGVFHVASPCTL----------EDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKG  143 (278)
Q Consensus        81 ---~d~vi~~a~~~~~----------~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~  143 (278)
                         +|++||+|+....          +...+++...+++|+.++.++++++.    +.+.+++|++||.....+.     
T Consensus        79 g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~-----  153 (253)
T PRK08642         79 GKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNPV-----  153 (253)
T ss_pred             CCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCCC-----
Confidence               8999999975311          11224557789999999999999885    3456789999985432111     


Q ss_pred             ccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCc
Q 023689          144 KVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT  220 (278)
Q Consensus       144 ~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~  220 (278)
                                     .+...|+.+|.+.+.+++.++++   .|++++.++||.+.++.....  .............|  
T Consensus       154 ---------------~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~--~~~~~~~~~~~~~~--  214 (253)
T PRK08642        154 ---------------VPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAA--TPDEVFDLIAATTP--  214 (253)
T ss_pred             ---------------CCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhcc--CCHHHHHHHHhcCC--
Confidence                           11257999999999999999876   489999999999988743321  11122222222222  


Q ss_pred             ccccccCcccHHHHHHHHHhhhcCC
Q 023689          221 QEYHWLGAVPVKDVAKAQVLLFESP  245 (278)
Q Consensus       221 ~~~~~~~~i~~~D~a~~~~~~~~~~  245 (278)
                          ...+.+++|+|+++.+++...
T Consensus       215 ----~~~~~~~~~va~~~~~l~~~~  235 (253)
T PRK08642        215 ----LRKVTTPQEFADAVLFFASPW  235 (253)
T ss_pred             ----cCCCCCHHHHHHHHHHHcCch
Confidence                245789999999999998753

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.91  E-value=5.1e-23  Score=168.48  Aligned_cols=203  Identities=23%  Similarity=0.193  Sum_probs=148.5

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc--------C
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--------G   80 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--------~   80 (278)
                      ||++|||||||+||++++++|+++|+ .|+++.|+.+..+.+.....  ..+++++++|++|.+++.++++        +
T Consensus         1 mk~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~   77 (260)
T PRK08267          1 MKSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELG--AGNAWTGALDVTDRAAWDAALADFAAATGGR   77 (260)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            57899999999999999999999999 89888887655433322111  1278999999999998887765        4


Q ss_pred             ccEEEEecccCCCCC----CCCchhhhhhhHHhHHHHHHHHHH----hcCCCEEEEecceeeeecCCCCCCccccCCCCC
Q 023689           81 CKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (278)
Q Consensus        81 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~  152 (278)
                      +|+|||+||......    ..++++..+++|+.++.++++++.    +.+.+++|++||..+.++..+.           
T Consensus        78 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~-----------  146 (260)
T PRK08267         78 LDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPGL-----------  146 (260)
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCCc-----------
Confidence            699999999754321    224567889999999999988774    3456789999998777665432           


Q ss_pred             chhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcc
Q 023689          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (278)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  229 (278)
                               ..|+.+|...+.+.+.++.+   .++++++++||.+.++.........   ......        .....+
T Consensus       147 ---------~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~---~~~~~~--------~~~~~~  206 (260)
T PRK08267        147 ---------AVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTSNEV---DAGSTK--------RLGVRL  206 (260)
T ss_pred             ---------hhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcccccccchh---hhhhHh--------hccCCC
Confidence                     56999999999888888754   4899999999999877533210000   000000        011236


Q ss_pred             cHHHHHHHHHhhhcCC
Q 023689          230 PVKDVAKAQVLLFESP  245 (278)
Q Consensus       230 ~~~D~a~~~~~~~~~~  245 (278)
                      .++|+|++++.++++.
T Consensus       207 ~~~~va~~~~~~~~~~  222 (260)
T PRK08267        207 TPEDVAEAVWAAVQHP  222 (260)
T ss_pred             CHHHHHHHHHHHHhCC
Confidence            7799999999998654

>PRK12742 oxidoreductase; Provisional

Probab=99.91  E-value=8.7e-23  Score=164.79  Aligned_cols=213  Identities=15%  Similarity=0.107  Sum_probs=148.7

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecC-CCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc---
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFP-GSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---   79 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~-~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---   79 (278)
                      |+.+++|++|||||+|+||++++++|.++|+ +|++..++ .+..+.+...   .  ++.++.+|++|.+++.++++   
T Consensus         1 m~~~~~k~vlItGasggIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~---~--~~~~~~~D~~~~~~~~~~~~~~~   74 (237)
T PRK12742          1 MGAFTGKKVLVLGGSRGIGAAIVRRFVTDGA-NVRFTYAGSKDAAERLAQE---T--GATAVQTDSADRDAVIDVVRKSG   74 (237)
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHH---h--CCeEEecCCCCHHHHHHHHHHhC
Confidence            4456689999999999999999999999999 77766543 2222222110   0  45688899999988887765   


Q ss_pred             CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHhc--CCCEEEEecceeeee-cCCCCCCccccCCCCC
Q 023689           80 GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIV-PNPGWKGKVFDETSWT  152 (278)
Q Consensus        80 ~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~Ss~~~~~-~~~~~~~~~~~E~~~~  152 (278)
                      ++|++||+||.....    ...++++..+++|+.++..+++.+.+.  ..+++|++||..+.. +.+             
T Consensus        75 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~-------------  141 (237)
T PRK12742         75 ALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDRMPVA-------------  141 (237)
T ss_pred             CCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccccCCCC-------------
Confidence            489999999875431    223467889999999999988766553  346899999865421 111             


Q ss_pred             chhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcc
Q 023689          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (278)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  229 (278)
                             ....|+.+|.+.+.+.+.++.+   .|+++++++||.+.++......    ..........+      ...+.
T Consensus       142 -------~~~~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~----~~~~~~~~~~~------~~~~~  204 (237)
T PRK12742        142 -------GMAAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANG----PMKDMMHSFMA------IKRHG  204 (237)
T ss_pred             -------CCcchHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCcccccc----HHHHHHHhcCC------CCCCC
Confidence                   1257999999999999888764   4899999999999887643221    11111111111      23467


Q ss_pred             cHHHHHHHHHhhhcCCCC--CceEE
Q 023689          230 PVKDVAKAQVLLFESPAA--SGRYL  252 (278)
Q Consensus       230 ~~~D~a~~~~~~~~~~~~--~~~~~  252 (278)
                      +++|+++++.+++.....  .|..+
T Consensus       205 ~p~~~a~~~~~l~s~~~~~~~G~~~  229 (237)
T PRK12742        205 RPEEVAGMVAWLAGPEASFVTGAMH  229 (237)
T ss_pred             CHHHHHHHHHHHcCcccCcccCCEE
Confidence            899999999998865432  45443

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.91  E-value=1.6e-22  Score=164.62  Aligned_cols=219  Identities=14%  Similarity=0.110  Sum_probs=153.2

Q ss_pred             cCCceEEEeCcc--hhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            7 KEEETVCVTGAN--GFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         7 ~~~~~vlItGat--G~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      +++|+++||||+  ++||+.++++|.++|+ .|++..|+.+..+.+.++..   ..+.++++|++|+++++++++     
T Consensus         5 l~~k~~lItGas~~~gIG~a~a~~la~~G~-~Vi~~~r~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~v~~~~~~~~~~   80 (252)
T PRK06079          5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGA-TVIYTYQNDRMKKSLQKLVD---EEDLLVECDVASDESIERAFATIKER   80 (252)
T ss_pred             cCCCEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEecCchHHHHHHHhhcc---CceeEEeCCCCCHHHHHHHHHHHHHH
Confidence            567999999999  7999999999999999 78888776332222222221   267899999999998887764     


Q ss_pred             --CccEEEEecccCCC--------CCCCCchhhhhhhHHhHHHHHHHHHHhc--CCCEEEEecceeeeecCCCCCCcccc
Q 023689           80 --GCKGVFHVASPCTL--------EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFD  147 (278)
Q Consensus        80 --~~d~vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~  147 (278)
                        ++|++|||||....        +...++++..+++|+.++..+.+++...  ..+++|++||.++..+.+.       
T Consensus        81 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~~~-------  153 (252)
T PRK06079         81 VGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERAIPN-------  153 (252)
T ss_pred             hCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccccCCc-------
Confidence              47999999986432        1233467888999999988888877543  2368999998665433222       


Q ss_pred             CCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccc
Q 023689          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (278)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (278)
                                   ...|+.+|...+.+.+.++.+   +|+++++|.||.|-++....... ............|      
T Consensus       154 -------------~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~-~~~~~~~~~~~~p------  213 (252)
T PRK06079        154 -------------YNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKG-HKDLLKESDSRTV------  213 (252)
T ss_pred             -------------chhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCC-hHHHHHHHHhcCc------
Confidence                         156999999999888888865   48999999999998875322111 1122222222222      


Q ss_pred             ccCcccHHHHHHHHHhhhcCCC--CCceEEecCc
Q 023689          225 WLGAVPVKDVAKAQVLLFESPA--ASGRYLCTNG  256 (278)
Q Consensus       225 ~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~~  256 (278)
                      ...+..++|+|+++.+++....  ..|..+..++
T Consensus       214 ~~r~~~pedva~~~~~l~s~~~~~itG~~i~vdg  247 (252)
T PRK06079        214 DGVGVTIEEVGNTAAFLLSDLSTGVTGDIIYVDK  247 (252)
T ss_pred             ccCCCCHHHHHHHHHHHhCcccccccccEEEeCC
Confidence            2347889999999999986532  3455444333

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.91  E-value=4.6e-23  Score=165.26  Aligned_cols=204  Identities=24%  Similarity=0.228  Sum_probs=144.3

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc---CccEEE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---GCKGVF   85 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---~~d~vi   85 (278)
                      ||++|||||+|+||+++++.|+++ + .|+++.|+....+.+...   .. +++++++|++|++++.++++   ++|+||
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~-~V~~~~r~~~~~~~~~~~---~~-~~~~~~~D~~~~~~~~~~~~~~~~id~vi   76 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-H-TLLLGGRPAERLDELAAE---LP-GATPFPVDLTDPEAIAAAVEQLGRLDVLV   76 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-C-CEEEEeCCHHHHHHHHHH---hc-cceEEecCCCCHHHHHHHHHhcCCCCEEE
Confidence            579999999999999999999999 7 899999876543322211   11 67899999999999999887   589999


Q ss_pred             EecccCCCCC----CCCchhhhhhhHHhHHH----HHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhh
Q 023689           86 HVASPCTLED----PVDPEKELILPAVQGTL----NVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYC  157 (278)
Q Consensus        86 ~~a~~~~~~~----~~~~~~~~~~~n~~~~~----~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~  157 (278)
                      |++|......    ..+.+...+++|+.+..    ++++++++.+ +++|++||..++.+.++                 
T Consensus        77 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~v~~ss~~~~~~~~~-----------------  138 (227)
T PRK08219         77 HNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAH-GHVVFINSGAGLRANPG-----------------  138 (227)
T ss_pred             ECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CeEEEEcchHhcCcCCC-----------------
Confidence            9998754321    12345667889988844    4555555554 68999998776544322                 


Q ss_pred             hccCchhhhHHHHHHHHHHHHHHhc-C-CceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHHHHH
Q 023689          158 KSRKKWYPVSKTLAEKAAWEFAEKH-G-VDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVA  235 (278)
Q Consensus       158 ~~~~~~y~~sK~~~e~~~~~~~~~~-~-~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  235 (278)
                         ...|+.+|...+.+.+.++... + +++++++||.+.++.....       ...  .+..    .....+++++|+|
T Consensus       139 ---~~~y~~~K~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~-------~~~--~~~~----~~~~~~~~~~dva  202 (227)
T PRK08219        139 ---WGSYAASKFALRALADALREEEPGNVRVTSVHPGRTDTDMQRGL-------VAQ--EGGE----YDPERYLRPETVA  202 (227)
T ss_pred             ---CchHHHHHHHHHHHHHHHHHHhcCCceEEEEecCCccchHhhhh-------hhh--hccc----cCCCCCCCHHHHH
Confidence               1579999999998888776542 5 8999999988766532211       000  1111    0134679999999


Q ss_pred             HHHHhhhcCCCCCceEE
Q 023689          236 KAQVLLFESPAASGRYL  252 (278)
Q Consensus       236 ~~~~~~~~~~~~~~~~~  252 (278)
                      ++++.+++++.....+.
T Consensus       203 ~~~~~~l~~~~~~~~~~  219 (227)
T PRK08219        203 KAVRFAVDAPPDAHITE  219 (227)
T ss_pred             HHHHHHHcCCCCCccce
Confidence            99999998765433443

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.91  E-value=1e-22  Score=171.72  Aligned_cols=192  Identities=15%  Similarity=0.073  Sum_probs=132.1

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc---
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE---   79 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---   79 (278)
                      |+..++|+++||||+|+||.+++++|+++|+ .|++..|+.+..+... .+.. ...++.++.+|++|.+++.++++   
T Consensus         1 m~~~~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~   78 (322)
T PRK07453          1 MSQDAKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGI-PPDSYTIIHIDLGDLDSVRRFVDDFR   78 (322)
T ss_pred             CCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhc-cCCceEEEEecCCCHHHHHHHHHHHH
Confidence            4455678999999999999999999999999 8888888765433221 1211 11268899999999999888775   


Q ss_pred             ----CccEEEEecccCCC-----CCCCCchhhhhhhHHhHHHHHHHHHHh----cC--CCEEEEecceeeeecCCC-CC-
Q 023689           80 ----GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAKR----FG--VRRVVVTSSISAIVPNPG-WK-  142 (278)
Q Consensus        80 ----~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~~----~~--~~~~v~~Ss~~~~~~~~~-~~-  142 (278)
                          ++|+|||+||....     ....+.++..+++|+.|+.++++++..    .+  .+++|++||....+.... .. 
T Consensus        79 ~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~  158 (322)
T PRK07453         79 ALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIP  158 (322)
T ss_pred             HhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccC
Confidence                38999999996432     112346788899999999988887743    33  358999999776542111 00 


Q ss_pred             -CccccCCCC-------Cch-----hhhhccCchhhhHHHHHHHHHHHHHHhc----CCceEEEecceeeCC
Q 023689          143 -GKVFDETSW-------TDL-----EYCKSRKKWYPVSKTLAEKAAWEFAEKH----GVDVVAIHPATCLGP  197 (278)
Q Consensus       143 -~~~~~E~~~-------~~~-----~~~~~~~~~y~~sK~~~e~~~~~~~~~~----~~~~~~lrp~~i~g~  197 (278)
                       ....+.++.       ..+     .....+...|+.||.+.+.+.+.+++++    |+++++++||.|++.
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t  230 (322)
T PRK07453        159 IPAPADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADT  230 (322)
T ss_pred             CCCccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCC
Confidence             000000000       000     0001223679999999988888777654    799999999999853

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.91  E-value=9.5e-23  Score=165.49  Aligned_cols=215  Identities=18%  Similarity=0.163  Sum_probs=151.9

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEE-ecCCCCCccccc-CCCCCCCceEEEEccCCChhhHHHHhc----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINAT-VFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~-~r~~~~~~~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~----   79 (278)
                      +++||++|||||+|+||++++++|+++|+ .|+++ .|+.+..+.+.. +.... .++.++.+|++|++++.++++    
T Consensus         2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~   79 (247)
T PRK05565          2 KLMGKVAIVTGASGGIGRAIAELLAKEGA-KVVIAYDINEEAAQELLEEIKEEG-GDAIAVKADVSSEEDVENLVEQIVE   79 (247)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcC-CeEEEEECCCCCHHHHHHHHHHHHH
Confidence            35678999999999999999999999999 77777 776544322211 11111 168899999999999888775    


Q ss_pred             ---CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHHH----hcCCCEEEEecceeeeecCCCCCCccccC
Q 023689           80 ---GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (278)
Q Consensus        80 ---~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E  148 (278)
                         ++|+|||++|....    +...+.++..+++|+.++.++++++.    +.+.+++|++||...+++.+..       
T Consensus        80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~-------  152 (247)
T PRK05565         80 KFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCE-------  152 (247)
T ss_pred             HhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCCc-------
Confidence               68999999987533    12234567889999999888877764    3456789999997776654332       


Q ss_pred             CCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccc
Q 023689          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (278)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (278)
                                   ..|+.+|...+.+++.++++   .|++++++|||.+.++.......   ..........      ..
T Consensus       153 -------------~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~---~~~~~~~~~~------~~  210 (247)
T PRK05565        153 -------------VLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSE---EDKEGLAEEI------PL  210 (247)
T ss_pred             -------------cHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccCh---HHHHHHHhcC------CC
Confidence                         46899998888777776654   48999999999998776443211   1111111111      12


Q ss_pred             cCcccHHHHHHHHHhhhcCCC--CCceE
Q 023689          226 LGAVPVKDVAKAQVLLFESPA--ASGRY  251 (278)
Q Consensus       226 ~~~i~~~D~a~~~~~~~~~~~--~~~~~  251 (278)
                      ..+..++|+++.+++++.+..  ..|++
T Consensus       211 ~~~~~~~~va~~~~~l~~~~~~~~~g~~  238 (247)
T PRK05565        211 GRLGKPEEIAKVVLFLASDDASYITGQI  238 (247)
T ss_pred             CCCCCHHHHHHHHHHHcCCccCCccCcE
Confidence            446789999999999987643  24554

>PRK06196 oxidoreductase; Provisional

Probab=99.91  E-value=1.1e-22  Score=170.95  Aligned_cols=220  Identities=19%  Similarity=0.109  Sum_probs=147.7

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc------
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~------   79 (278)
                      +++|+||||||||+||++++++|+++|+ .|++..|+.+..+... .+.     ++.++++|++|.++++++++      
T Consensus        24 l~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~-----~v~~~~~Dl~d~~~v~~~~~~~~~~~   97 (315)
T PRK06196         24 LSGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGID-----GVEVVMLDLADLESVRAFAERFLDSG   97 (315)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhh-----hCeEEEccCCCHHHHHHHHHHHHhcC
Confidence            3578999999999999999999999999 8888888765433221 111     47889999999998888764      


Q ss_pred             -CccEEEEecccCCC--CCCCCchhhhhhhHHhHHHHHHH----HHHhcCCCEEEEecceeeeecCCCCCCccccCCCCC
Q 023689           80 -GCKGVFHVASPCTL--EDPVDPEKELILPAVQGTLNVLE----AAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (278)
Q Consensus        80 -~~d~vi~~a~~~~~--~~~~~~~~~~~~~n~~~~~~ll~----~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~  152 (278)
                       ++|+|||+||....  ....+.++..+++|+.++..+++    .+++.+.+++|++||..........  .......+.
T Consensus        98 ~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~--~~~~~~~~~  175 (315)
T PRK06196         98 RRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRW--DDPHFTRGY  175 (315)
T ss_pred             CCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCc--cccCccCCC
Confidence             58999999996432  22234678889999999666555    4455555799999986543321111  000001111


Q ss_pred             chhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhh--CCCCcccccccC
Q 023689          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQ--GSKDTQEYHWLG  227 (278)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  227 (278)
                            .+...|+.||.+.+.+.+.++++   +|+++++++||.+.++......... ........  +.+.     ...
T Consensus       176 ------~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~-~~~~~~~~~~~~~~-----~~~  243 (315)
T PRK06196        176 ------DKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREE-QVALGWVDEHGNPI-----DPG  243 (315)
T ss_pred             ------ChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhh-hhhhhhhhhhhhhh-----hhh
Confidence                  11257999999999988888764   4899999999999998654321100 00000000  0010     012


Q ss_pred             cccHHHHHHHHHhhhcCCC
Q 023689          228 AVPVKDVAKAQVLLFESPA  246 (278)
Q Consensus       228 ~i~~~D~a~~~~~~~~~~~  246 (278)
                      +..++|.|..+++++..+.
T Consensus       244 ~~~~~~~a~~~~~l~~~~~  262 (315)
T PRK06196        244 FKTPAQGAATQVWAATSPQ  262 (315)
T ss_pred             cCCHhHHHHHHHHHhcCCc
Confidence            4678999999999986543

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.91  E-value=9.3e-23  Score=166.71  Aligned_cols=224  Identities=17%  Similarity=0.147  Sum_probs=156.4

Q ss_pred             CccccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCCCCCCceEEEEccCCChhhHHHHhc
Q 023689            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE   79 (278)
Q Consensus         1 m~~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~   79 (278)
                      |+-...+++|++|||||+|+||++++++|.++|+ .|+++.|+.+..+.+.. +.... .+++++.+|+++++++.++++
T Consensus         1 ~~~~~~~~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~   78 (258)
T PRK06949          1 MGRSINLEGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEG-GAAHVVSLDVTDYQSIKAAVA   78 (258)
T ss_pred             CCcccCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHH
Confidence            3333456679999999999999999999999999 89999887654333322 11111 268899999999998888776


Q ss_pred             -------CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHh----cC--------CCEEEEecceeeee
Q 023689           80 -------GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FG--------VRRVVVTSSISAIV  136 (278)
Q Consensus        80 -------~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~----~~--------~~~~v~~Ss~~~~~  136 (278)
                             ++|++||+|+.....    ...++++..+++|+.++..+++++..    ..        .+++|++||..++.
T Consensus        79 ~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~  158 (258)
T PRK06949         79 HAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLR  158 (258)
T ss_pred             HHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccC
Confidence                   579999999864431    12345778899999999988887642    22        35899999866643


Q ss_pred             cCCCCCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHH
Q 023689          137 PNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQL  213 (278)
Q Consensus       137 ~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~  213 (278)
                      +.+.                    ...|+.+|.+.+.+.+.++.+   .++++++++||.++++.......  .......
T Consensus       159 ~~~~--------------------~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~--~~~~~~~  216 (258)
T PRK06949        159 VLPQ--------------------IGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWE--TEQGQKL  216 (258)
T ss_pred             CCCC--------------------ccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccC--hHHHHHH
Confidence            3221                    157999999999888888765   48999999999999987543211  1111111


Q ss_pred             hhCCCCcccccccCcccHHHHHHHHHhhhcCCC--CCceEEec
Q 023689          214 LQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLCT  254 (278)
Q Consensus       214 ~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~~  254 (278)
                       ....     ....+..++|+++.+.+++....  ..|.++..
T Consensus       217 -~~~~-----~~~~~~~p~~~~~~~~~l~~~~~~~~~G~~i~~  253 (258)
T PRK06949        217 -VSML-----PRKRVGKPEDLDGLLLLLAADESQFINGAIISA  253 (258)
T ss_pred             -HhcC-----CCCCCcCHHHHHHHHHHHhChhhcCCCCcEEEe
Confidence             1111     12456778999999999987533  34555433

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.91  E-value=3.7e-23  Score=174.74  Aligned_cols=208  Identities=16%  Similarity=0.083  Sum_probs=147.7

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc---
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE---   79 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---   79 (278)
                      |..+++|+++||||||+||++++++|.++|+ .|+++.|+.+..+... .+...+. ++.++.+|++|+++++++++   
T Consensus         3 ~~~l~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~-~~~~v~~Dv~d~~~v~~~~~~~~   80 (334)
T PRK07109          3 LKPIGRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEEGLEALAAEIRAAGG-EALAVVADVADAEAVQAAADRAE   80 (334)
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCC-cEEEEEecCCCHHHHHHHHHHHH
Confidence            3456678999999999999999999999999 8888888765433221 1111122 78899999999999888765   


Q ss_pred             ----CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHH----HHHHHHhcCCCEEEEecceeeeecCCCCCCcccc
Q 023689           80 ----GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLN----VLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFD  147 (278)
Q Consensus        80 ----~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~----ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~  147 (278)
                          .+|++||+|+....    +...++++..+++|+.++.+    +++.+++++.++||++||..++.+.+..      
T Consensus        81 ~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~~~------  154 (334)
T PRK07109         81 EELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPLQ------  154 (334)
T ss_pred             HHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCCcc------
Confidence                58999999986433    12234567788898776655    5555566666899999998776543321      


Q ss_pred             CCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh-----cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccc
Q 023689          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK-----HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQE  222 (278)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-----~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (278)
                                    ..|+.+|...+.+.+.++.+     .++++++++|+.+.++.....        .......    .
T Consensus       155 --------------~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~--------~~~~~~~----~  208 (334)
T PRK07109        155 --------------SAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWA--------RSRLPVE----P  208 (334)
T ss_pred             --------------hHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhh--------hhhcccc----c
Confidence                          56999999888877776643     369999999999988742211        1111111    1


Q ss_pred             ccccCcccHHHHHHHHHhhhcCC
Q 023689          223 YHWLGAVPVKDVAKAQVLLFESP  245 (278)
Q Consensus       223 ~~~~~~i~~~D~a~~~~~~~~~~  245 (278)
                      .....+.+++|+|+++++++.++
T Consensus       209 ~~~~~~~~pe~vA~~i~~~~~~~  231 (334)
T PRK07109        209 QPVPPIYQPEVVADAILYAAEHP  231 (334)
T ss_pred             cCCCCCCCHHHHHHHHHHHHhCC
Confidence            11335678999999999999875

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.91  E-value=1.4e-22  Score=165.46  Aligned_cols=210  Identities=16%  Similarity=0.161  Sum_probs=151.7

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      ++++|++|||||+|+||++++++|.++|+ .|++..|+.+..+.+.. +...+. ++.++.+|++|.+++.++++     
T Consensus         8 ~l~~k~vlVtG~s~gIG~~la~~l~~~G~-~vv~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~i~~~~~~~~~~   85 (255)
T PRK06113          8 RLDGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGG-QAFACRCDITSEQELSALADFALSK   85 (255)
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHH
Confidence            45679999999999999999999999999 78888776543322211 111112 68889999999998887764     


Q ss_pred             --CccEEEEecccCCCC---CCCCchhhhhhhHHhHHHHHHHHHH----hcCCCEEEEecceeeeecCCCCCCccccCCC
Q 023689           80 --GCKGVFHVASPCTLE---DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (278)
Q Consensus        80 --~~d~vi~~a~~~~~~---~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~  150 (278)
                        ++|++||+|+.....   ...+.++..+++|+.++.++++++.    +.+.+++|++||..+..+.+.          
T Consensus        86 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~----------  155 (255)
T PRK06113         86 LGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNIN----------  155 (255)
T ss_pred             cCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCC----------
Confidence              479999999864432   2234566779999999999999885    334468999999776543322          


Q ss_pred             CCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccC
Q 023689          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (278)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (278)
                                ...|+.+|.+.+.+.+.++.+   .+++++++.||.+.++.....  .......+.....+      ...
T Consensus       156 ----------~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~--~~~~~~~~~~~~~~------~~~  217 (255)
T PRK06113        156 ----------MTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSV--ITPEIEQKMLQHTP------IRR  217 (255)
T ss_pred             ----------cchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccc--cCHHHHHHHHhcCC------CCC
Confidence                      146999999999999888754   489999999999998764322  11222233333222      234


Q ss_pred             cccHHHHHHHHHhhhcCC
Q 023689          228 AVPVKDVAKAQVLLFESP  245 (278)
Q Consensus       228 ~i~~~D~a~~~~~~~~~~  245 (278)
                      +..++|+++++++++...
T Consensus       218 ~~~~~d~a~~~~~l~~~~  235 (255)
T PRK06113        218 LGQPQDIANAALFLCSPA  235 (255)
T ss_pred             CcCHHHHHHHHHHHcCcc
Confidence            679999999999998653

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.91  E-value=1.3e-22  Score=166.59  Aligned_cols=211  Identities=16%  Similarity=0.092  Sum_probs=151.3

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc------
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~------   79 (278)
                      +.+|++|||||+|+||++++++|+++|+ .|++..|+.+..+... .+...+ .++.++++|++|++++.++++      
T Consensus         8 ~~~k~~lItGa~~~iG~~ia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~   85 (265)
T PRK07097          8 LKGKIALITGASYGIGFAIAKAYAKAGA-TIVFNDINQELVDKGLAAYRELG-IEAHGYVCDVTDEDGVQAMVSQIEKEV   85 (265)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcC-CceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            3568999999999999999999999999 7888877665433222 111111 268899999999999888775      


Q ss_pred             -CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHHH----hcCCCEEEEecceeeeecCCCCCCccccCCC
Q 023689           80 -GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (278)
Q Consensus        80 -~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~  150 (278)
                       ++|++||+||....    +...+.+...+++|+.++..+++++.    +.+.++||++||..+.++.+..         
T Consensus        86 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  156 (265)
T PRK07097         86 GVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETV---------  156 (265)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCCCC---------
Confidence             47999999997553    22345668888999998887777663    3456799999997665543321         


Q ss_pred             CCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCc-----hhHHHHHHHhhCCCCccc
Q 023689          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLN-----ASCAVLQQLLQGSKDTQE  222 (278)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~  222 (278)
                                 ..|+.+|...+.+.+.++.+.   |++++.++||.+.++.......     ....+........+    
T Consensus       157 -----------~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~----  221 (265)
T PRK07097        157 -----------SAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTP----  221 (265)
T ss_pred             -----------ccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCC----
Confidence                       579999999999999888764   8999999999999985432110     00011111111111    


Q ss_pred             ccccCcccHHHHHHHHHhhhcCC
Q 023689          223 YHWLGAVPVKDVAKAQVLLFESP  245 (278)
Q Consensus       223 ~~~~~~i~~~D~a~~~~~~~~~~  245 (278)
                        ...+..++|+|+.+.+++...
T Consensus       222 --~~~~~~~~dva~~~~~l~~~~  242 (265)
T PRK07097        222 --AARWGDPEDLAGPAVFLASDA  242 (265)
T ss_pred             --ccCCcCHHHHHHHHHHHhCcc
Confidence              234678999999999998763

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.91  E-value=1.5e-22  Score=165.18  Aligned_cols=218  Identities=15%  Similarity=0.128  Sum_probs=149.5

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCC-CcccccCCCCCCCceEEEEccCCChhhHHHHhc------
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~-~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~------   79 (278)
                      +++|+++||||+|+||++++++|.++|+ .|++..++.+. ...+...      ++.++.+|++|++++.++++      
T Consensus         5 l~~k~~lItGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~------~~~~~~~Dl~~~~~~~~~~~~~~~~~   77 (255)
T PRK06463          5 FKGKVALITGGTRGIGRAIAEAFLREGA-KVAVLYNSAENEAKELREK------GVFTIKCDVGNRDQVKKSKEVVEKEF   77 (255)
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHhC------CCeEEEecCCCHHHHHHHHHHHHHHc
Confidence            5678999999999999999999999999 77766554322 2222111      57889999999999888775      


Q ss_pred             -CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHH----HHHHHhcCCCEEEEecceeeeecCCCCCCccccCCC
Q 023689           80 -GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNV----LEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (278)
Q Consensus        80 -~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l----l~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~  150 (278)
                       ++|+|||+||.....    ...++++..+++|+.++..+    ++.+++.+.+++|++||..++.....          
T Consensus        78 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~----------  147 (255)
T PRK06463         78 GRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAE----------  147 (255)
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCCC----------
Confidence             579999999875421    12345678899999996554    55555555679999999766432110          


Q ss_pred             CCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCC--chhHHHHHHHhhCCCCcccccc
Q 023689          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYL--NASCAVLQQLLQGSKDTQEYHW  225 (278)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~  225 (278)
                               ....|+.+|.+.+.+.+.++.+   +|+++++++||.+-++......  ..............+      .
T Consensus       148 ---------~~~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~------~  212 (255)
T PRK06463        148 ---------GTTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTV------L  212 (255)
T ss_pred             ---------CccHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCC------c
Confidence                     0146999999999998888864   4899999999999877532210  011111111222222      3


Q ss_pred             cCcccHHHHHHHHHhhhcCCC--CCce-EEecCc
Q 023689          226 LGAVPVKDVAKAQVLLFESPA--ASGR-YLCTNG  256 (278)
Q Consensus       226 ~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  256 (278)
                      ..+..++|+|+++++++....  ..|. +.+.++
T Consensus       213 ~~~~~~~~va~~~~~l~s~~~~~~~G~~~~~dgg  246 (255)
T PRK06463        213 KTTGKPEDIANIVLFLASDDARYITGQVIVADGG  246 (255)
T ss_pred             CCCcCHHHHHHHHHHHcChhhcCCCCCEEEECCC
Confidence            456789999999999987543  2454 344443

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.91  E-value=3.3e-22  Score=167.44  Aligned_cols=191  Identities=18%  Similarity=0.112  Sum_probs=133.2

Q ss_pred             ccccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccc-ccCCCC-CCCceEEEEccCCChhhHHHHhc
Q 023689            2 ASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL-FALPGA-GDANLRVFEADVLDSGAVSRAVE   79 (278)
Q Consensus         2 ~~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~-~~~~~~-~~~~v~~~~~Dl~d~~~~~~~~~   79 (278)
                      ++|.++++|+||||||+|+||++++++|.++|+ .|++..|+.+..... ..+... ...++.++++|++|.+++.++++
T Consensus         9 ~~~~~~~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~   87 (306)
T PRK06197          9 ADIPDQSGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAAD   87 (306)
T ss_pred             cccccCCCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHH
Confidence            356677889999999999999999999999999 888888865442221 111110 11268899999999998888765


Q ss_pred             -------CccEEEEecccCCCC--CCCCchhhhhhhHHhH----HHHHHHHHHhcCCCEEEEecceeeee-cCCCCCCcc
Q 023689           80 -------GCKGVFHVASPCTLE--DPVDPEKELILPAVQG----TLNVLEAAKRFGVRRVVVTSSISAIV-PNPGWKGKV  145 (278)
Q Consensus        80 -------~~d~vi~~a~~~~~~--~~~~~~~~~~~~n~~~----~~~ll~~~~~~~~~~~v~~Ss~~~~~-~~~~~~~~~  145 (278)
                             ++|+|||+||.....  ...+.++..+++|+.+    +..+++.+++.+.++||++||..+.. +....  ..
T Consensus        88 ~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~--~~  165 (306)
T PRK06197         88 ALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHF--DD  165 (306)
T ss_pred             HHHhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCc--cc
Confidence                   579999999875432  2335667889999998    56667777766667999999876533 21111  11


Q ss_pred             ccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEE--ecceeeCCCCCC
Q 023689          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAI--HPATCLGPLMQP  201 (278)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~l--rp~~i~g~~~~~  201 (278)
                      ..++...      .+...|+.||.+.+.+.+.++++.   +++++++  .||.|.++....
T Consensus       166 ~~~~~~~------~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~  220 (306)
T PRK06197        166 LQWERRY------NRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARN  220 (306)
T ss_pred             cCcccCC------CcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCccccc
Confidence            1111111      122579999999999998888654   6666554  799998886543

>PRK09242 tropinone reductase; Provisional

Probab=99.90  E-value=1.7e-22  Score=165.07  Aligned_cols=214  Identities=16%  Similarity=0.136  Sum_probs=154.4

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCCC-CCCceEEEEccCCChhhHHHHhc--
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGA-GDANLRVFEADVLDSGAVSRAVE--   79 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~~-~~~~v~~~~~Dl~d~~~~~~~~~--   79 (278)
                      |..+++|++|||||+|+||++++++|.++|+ +|+++.|+.+..+.+.. +... .+.++.++++|+++++++.++++  
T Consensus         4 ~~~~~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   82 (257)
T PRK09242          4 RWRLDGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWV   82 (257)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence            4456789999999999999999999999999 89888887654332221 1111 11278899999999988777664  


Q ss_pred             -----CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHHH----hcCCCEEEEecceeeeecCCCCCCccc
Q 023689           80 -----GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVF  146 (278)
Q Consensus        80 -----~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~  146 (278)
                           ++|+|||+||....    +...++++..+++|+.++..+++++.    +.+.+++|++||..+..+.+..     
T Consensus        83 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~-----  157 (257)
T PRK09242         83 EDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSG-----  157 (257)
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCCC-----
Confidence                 57999999986432    22345678889999999998888774    4556789999997665443321     


Q ss_pred             cCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccc
Q 023689          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (278)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (278)
                                     ..|+.+|...+.+++.++.+   .+++++.++||.+.++........ ...........+     
T Consensus       158 ---------------~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~-~~~~~~~~~~~~-----  216 (257)
T PRK09242        158 ---------------APYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSD-PDYYEQVIERTP-----  216 (257)
T ss_pred             ---------------cchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCC-hHHHHHHHhcCC-----
Confidence                           56999999999988887754   489999999999999875433211 222222222222     


Q ss_pred             cccCcccHHHHHHHHHhhhcCC
Q 023689          224 HWLGAVPVKDVAKAQVLLFESP  245 (278)
Q Consensus       224 ~~~~~i~~~D~a~~~~~~~~~~  245 (278)
                       ...+..++|++.++.+++...
T Consensus       217 -~~~~~~~~~va~~~~~l~~~~  237 (257)
T PRK09242        217 -MRRVGEPEEVAAAVAFLCMPA  237 (257)
T ss_pred             -CCCCcCHHHHHHHHHHHhCcc
Confidence             233557899999999998653

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.90  E-value=7.9e-23  Score=167.29  Aligned_cols=228  Identities=14%  Similarity=0.094  Sum_probs=151.3

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCC-CCCccc-ccCCCCCCCceEEEEccCCChhhHHHHhc--
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG-SDSSHL-FALPGAGDANLRVFEADVLDSGAVSRAVE--   79 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~-~~~~~~-~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--   79 (278)
                      |..+++|++|||||+++||++++++|++.|+ .|++..|+. +..+.. ..+......++.++.+|++|++++.++++  
T Consensus         3 ~~~l~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   81 (260)
T PRK08416          3 SNEMKGKTLVISGGTRGIGKAIVYEFAQSGV-NIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKI   81 (260)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence            4466789999999999999999999999999 777665433 222211 11111111278899999999998887765  


Q ss_pred             -----CccEEEEecccCCC----------CCCCCchhhhhhhHHhHHHHHHHH----HHhcCCCEEEEecceeeeecCCC
Q 023689           80 -----GCKGVFHVASPCTL----------EDPVDPEKELILPAVQGTLNVLEA----AKRFGVRRVVVTSSISAIVPNPG  140 (278)
Q Consensus        80 -----~~d~vi~~a~~~~~----------~~~~~~~~~~~~~n~~~~~~ll~~----~~~~~~~~~v~~Ss~~~~~~~~~  140 (278)
                           ++|++||+||....          +.....+...+++|+.+...+.+.    +++.+.++||++||..+..+.+.
T Consensus        82 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  161 (260)
T PRK08416         82 DEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIEN  161 (260)
T ss_pred             HHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCCCC
Confidence                 47999999975321          111234567788888776655554    44445578999999665433322


Q ss_pred             CCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCC
Q 023689          141 WKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGS  217 (278)
Q Consensus       141 ~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~  217 (278)
                      .                    ..|+.+|.+.+.+.+.++.+.   |+++++++||.+.++....... ............
T Consensus       162 ~--------------------~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~-~~~~~~~~~~~~  220 (260)
T PRK08416        162 Y--------------------AGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTN-YEEVKAKTEELS  220 (260)
T ss_pred             c--------------------ccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccC-CHHHHHHHHhcC
Confidence            1                    469999999999998888764   8999999999998875322111 111222222222


Q ss_pred             CCcccccccCcccHHHHHHHHHhhhcCCC--CCceEEecCcccc
Q 023689          218 KDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLCTNGIYQ  259 (278)
Q Consensus       218 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~~~~s  259 (278)
                      |      ...+..++|+|+++++++....  ..|.++..++..+
T Consensus       221 ~------~~r~~~p~~va~~~~~l~~~~~~~~~G~~i~vdgg~~  258 (260)
T PRK08416        221 P------LNRMGQPEDLAGACLFLCSEKASWLTGQTIVVDGGTT  258 (260)
T ss_pred             C------CCCCCCHHHHHHHHHHHcChhhhcccCcEEEEcCCee
Confidence            2      2346789999999999986532  2455443333333

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.1e-22  Score=165.00  Aligned_cols=210  Identities=22%  Similarity=0.256  Sum_probs=149.1

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCC-Cccc-ccCCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHL-FALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~-~~~~-~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      +++|++|||||+|+||+++++.|.++|+ .|+++.|+... ...+ ..+.... .++.++.+|++|++++.++++     
T Consensus         3 ~~~~~vlItG~~~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (245)
T PRK12937          3 LSNKVAIVTGASRGIGAAIARRLAADGF-AVAVNYAGSAAAADELVAEIEAAG-GRAIAVQADVADAAAVTRLFDAAETA   80 (245)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHHHhcC-CeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            5568999999999999999999999999 67666654322 1111 1111111 278899999999999888876     


Q ss_pred             --CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHHHhc--CCCEEEEecceeeeecCCCCCCccccCCCC
Q 023689           80 --GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (278)
Q Consensus        80 --~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~  151 (278)
                        ++|+|||+||....    ....+.++..+++|+.++.++++++.+.  ..+++|++||.....+.+.           
T Consensus        81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~-----------  149 (245)
T PRK12937         81 FGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALPLPG-----------  149 (245)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCCCCC-----------
Confidence              58999999987542    1223456788999999999999888654  2358999998655433222           


Q ss_pred             CchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCc
Q 023689          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (278)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (278)
                               ...|+.+|...+.+++.++.+   .++++++++||.+.++.....  ........+....+      ...+
T Consensus       150 ---------~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~--~~~~~~~~~~~~~~------~~~~  212 (245)
T PRK12937        150 ---------YGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNG--KSAEQIDQLAGLAP------LERL  212 (245)
T ss_pred             ---------CchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhccc--CCHHHHHHHHhcCC------CCCC
Confidence                     257999999999999888765   389999999999888753211  11222333333332      2345


Q ss_pred             ccHHHHHHHHHhhhcCCC
Q 023689          229 VPVKDVAKAQVLLFESPA  246 (278)
Q Consensus       229 i~~~D~a~~~~~~~~~~~  246 (278)
                      .+++|+|+++.+++....
T Consensus       213 ~~~~d~a~~~~~l~~~~~  230 (245)
T PRK12937        213 GTPEEIAAAVAFLAGPDG  230 (245)
T ss_pred             CCHHHHHHHHHHHcCccc
Confidence            688999999999986543

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.90  E-value=1.3e-22  Score=166.31  Aligned_cols=211  Identities=20%  Similarity=0.133  Sum_probs=149.8

Q ss_pred             cccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         5 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      ..+++|++|||||+|+||++++++|.++|+ .|++..|+.+..+.+....   ..++.++++|++|++++.++++     
T Consensus         2 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (263)
T PRK06200          2 GWLHGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRF---GDHVLVVEGDVTSYADNQRAVDQTVDA   77 (263)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHHh
Confidence            345678999999999999999999999999 8888888765443332211   1167889999999988887765     


Q ss_pred             --CccEEEEecccCCC-----CCCCC----chhhhhhhHHhHHHHHHHHHHhc---CCCEEEEecceeeeecCCCCCCcc
Q 023689           80 --GCKGVFHVASPCTL-----EDPVD----PEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKV  145 (278)
Q Consensus        80 --~~d~vi~~a~~~~~-----~~~~~----~~~~~~~~n~~~~~~ll~~~~~~---~~~~~v~~Ss~~~~~~~~~~~~~~  145 (278)
                        ++|++||+||....     +...+    .++..+++|+.++..+++++...   ..+++|++||..++.+.++.    
T Consensus        78 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~----  153 (263)
T PRK06200         78 FGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPGGGG----  153 (263)
T ss_pred             cCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCCC----
Confidence              57999999996432     11112    26678899999988888877432   23689999997776543321    


Q ss_pred             ccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc--CCceEEEecceeeCCCCCCCC--------chhHHHHHHHhh
Q 023689          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQPYL--------NASCAVLQQLLQ  215 (278)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~~~~~~lrp~~i~g~~~~~~~--------~~~~~~~~~~~~  215 (278)
                                      ..|+.+|.+.+.+.+.++.+.  +++++++.||.+.++......        ............
T Consensus       154 ----------------~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (263)
T PRK06200        154 ----------------PLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAA  217 (263)
T ss_pred             ----------------chhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhc
Confidence                            469999999999998888754  599999999999887532110        000111111111


Q ss_pred             CCCCcccccccCcccHHHHHHHHHhhhcCC
Q 023689          216 GSKDTQEYHWLGAVPVKDVAKAQVLLFESP  245 (278)
Q Consensus       216 ~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  245 (278)
                      ..|      ...+..++|+|+++++++...
T Consensus       218 ~~p------~~r~~~~~eva~~~~fl~s~~  241 (263)
T PRK06200        218 ITP------LQFAPQPEDHTGPYVLLASRR  241 (263)
T ss_pred             CCC------CCCCCCHHHHhhhhhheeccc
Confidence            111      345778999999999998654

>PRK08017 oxidoreductase; Provisional

Probab=99.90  E-value=1.6e-22  Score=165.09  Aligned_cols=225  Identities=20%  Similarity=0.194  Sum_probs=153.6

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc--------Cc
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--------GC   81 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--------~~   81 (278)
                      |++|||||+|+||+++++.|.++|+ +|+++.|+.+..+.+...      +++.+++|++|.+++.++++        .+
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~------~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~   75 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDDVARMNSL------GFTGILLDLDDPESVERAADEVIALTDNRL   75 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHhHHHHhC------CCeEEEeecCCHHHHHHHHHHHHHhcCCCC
Confidence            6899999999999999999999999 888888876554333221      57889999999988776553        36


Q ss_pred             cEEEEecccCCCC----CCCCchhhhhhhHHhHHHHH----HHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCc
Q 023689           82 KGVFHVASPCTLE----DPVDPEKELILPAVQGTLNV----LEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (278)
Q Consensus        82 d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l----l~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~  153 (278)
                      |.++|+||.....    ...+.++..+++|+.|+.++    ++.+++.+.+++|++||..+..+.+.             
T Consensus        76 ~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~-------------  142 (256)
T PRK08017         76 YGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTPG-------------  142 (256)
T ss_pred             eEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCCC-------------
Confidence            8999999864431    12335568899999988775    56666777789999999765443322             


Q ss_pred             hhhhhccCchhhhHHHHHHHHHHHHHH---hcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcc-cccccCcc
Q 023689          154 LEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ-EYHWLGAV  229 (278)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i  229 (278)
                             ...|+.+|...|.+.+.++.   ..+++++++|||.+.++.......        .....+... +...+.++
T Consensus       143 -------~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~--------~~~~~~~~~~~~~~~~~~  207 (256)
T PRK08017        143 -------RGAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQ--------TQSDKPVENPGIAARFTL  207 (256)
T ss_pred             -------ccHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhcccc--------hhhccchhhhHHHhhcCC
Confidence                   15799999999988766543   458999999998887654222100        000011111 11235679


Q ss_pred             cHHHHHHHHHhhhcCCCCCceEEecCccccHHHHHHHHHHhCCC
Q 023689          230 PVKDVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       230 ~~~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~~~  273 (278)
                      +++|+++++..+++++.....+ ..   ..+..+...+.+.+|+
T Consensus       208 ~~~d~a~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~p~  247 (256)
T PRK08017        208 GPEAVVPKLRHALESPKPKLRY-PV---TLVTHAVMVLKRLLPG  247 (256)
T ss_pred             CHHHHHHHHHHHHhCCCCCcee-ec---CcchHHHHHHHHHCCH
Confidence            9999999999999876553222 10   1122444555666653

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.90  E-value=7.2e-23  Score=166.24  Aligned_cols=208  Identities=16%  Similarity=0.124  Sum_probs=143.4

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEE-ecCCCCCccc-ccCCCCCCCceEEEEccCCChhhHHHHhc-------
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINAT-VFPGSDSSHL-FALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~-~r~~~~~~~~-~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------   79 (278)
                      |+++|||||+|+||++++++|+++|+ .|++. .|+.+..... ..+.... .++.++++|++|++++.++++       
T Consensus         1 ~~~~lItGa~g~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~d~~~i~~~~~~~~~~~~   78 (247)
T PRK09730          1 MAIALVTGGSRGIGRATALLLAQEGY-TVAVNYQQNLHAAQEVVNLITQAG-GKAFVLQADISDENQVVAMFTAIDQHDE   78 (247)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhCC-CeEEEEEccCCCHHHHHHHHHHHHHhCC
Confidence            47899999999999999999999999 67654 4544322211 1111111 268889999999999888776       


Q ss_pred             CccEEEEecccCCCC-----CCCCchhhhhhhHHhHHHHHHHHHHhc-------CCCEEEEecceeeeecCCCCCCcccc
Q 023689           80 GCKGVFHVASPCTLE-----DPVDPEKELILPAVQGTLNVLEAAKRF-------GVRRVVVTSSISAIVPNPGWKGKVFD  147 (278)
Q Consensus        80 ~~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~ll~~~~~~-------~~~~~v~~Ss~~~~~~~~~~~~~~~~  147 (278)
                      ++|+|||+|+.....     ...++++..+++|+.++..+++++...       +.++||++||..++++.+..      
T Consensus        79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~------  152 (247)
T PRK09730         79 PLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGE------  152 (247)
T ss_pred             CCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCc------
Confidence            358999999864321     122345688999999998777765332       13579999997776553321      


Q ss_pred             CCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccc
Q 023689          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (278)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (278)
                                   ...|+.+|...+.+++.++.+   .+++++++||+.++|+......  ............+.     
T Consensus       153 -------------~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~--~~~~~~~~~~~~~~-----  212 (247)
T PRK09730        153 -------------YVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGG--EPGRVDRVKSNIPM-----  212 (247)
T ss_pred             -------------ccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCC--CHHHHHHHHhcCCC-----
Confidence                         135999999999888877654   4899999999999999643321  11222222222221     


Q ss_pred             ccCcccHHHHHHHHHhhhcCC
Q 023689          225 WLGAVPVKDVAKAQVLLFESP  245 (278)
Q Consensus       225 ~~~~i~~~D~a~~~~~~~~~~  245 (278)
                       ....+++|+|+++++++.+.
T Consensus       213 -~~~~~~~dva~~~~~~~~~~  232 (247)
T PRK09730        213 -QRGGQPEEVAQAIVWLLSDK  232 (247)
T ss_pred             -CCCcCHHHHHHHHHhhcChh
Confidence             12348899999999988754

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.90  E-value=6.7e-22  Score=159.28  Aligned_cols=198  Identities=17%  Similarity=0.145  Sum_probs=143.0

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc------Ccc
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------GCK   82 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~------~~d   82 (278)
                      +|++|||||+|+||++++++|.++|+ .|+++.|+....     .      ..+++++|++|.+++.++++      ++|
T Consensus         3 ~k~vlItG~s~~iG~~ia~~l~~~G~-~v~~~~r~~~~~-----~------~~~~~~~D~~~~~~~~~~~~~~~~~~~~d   70 (234)
T PRK07577          3 SRTVLVTGATKGIGLALSLRLANLGH-QVIGIARSAIDD-----F------PGELFACDLADIEQTAATLAQINEIHPVD   70 (234)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCcccc-----c------CceEEEeeCCCHHHHHHHHHHHHHhCCCc
Confidence            57999999999999999999999999 898888876431     1      23578899999998888776      579


Q ss_pred             EEEEecccCCCCC----CCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccCCCCCch
Q 023689           83 GVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDL  154 (278)
Q Consensus        83 ~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~  154 (278)
                      +|||+|+......    ..+++...+++|+.++.++.+++    ++.+.+++|++||... ++.+.              
T Consensus        71 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~-~~~~~--------------  135 (234)
T PRK07577         71 AIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAI-FGALD--------------  135 (234)
T ss_pred             EEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccc-cCCCC--------------
Confidence            9999999755422    23456678899998887776655    4566789999998643 33222              


Q ss_pred             hhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccH
Q 023689          155 EYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPV  231 (278)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  231 (278)
                            ...|+.+|...+.+.+.++.+   +|++++++|||.+.++....................+      ...+..+
T Consensus       136 ------~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~  203 (234)
T PRK07577        136 ------RTSYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIP------MRRLGTP  203 (234)
T ss_pred             ------chHHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcCC------CCCCcCH
Confidence                  157999999999888877653   4999999999999988643221111111122222222      2234588


Q ss_pred             HHHHHHHHhhhcCC
Q 023689          232 KDVAKAQVLLFESP  245 (278)
Q Consensus       232 ~D~a~~~~~~~~~~  245 (278)
                      +|+|++++.++..+
T Consensus       204 ~~~a~~~~~l~~~~  217 (234)
T PRK07577        204 EEVAAAIAFLLSDD  217 (234)
T ss_pred             HHHHHHHHHHhCcc
Confidence            99999999998764

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.90  E-value=2e-22  Score=164.68  Aligned_cols=225  Identities=14%  Similarity=0.059  Sum_probs=153.1

Q ss_pred             CccccccCCceEEEeCcc--hhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHh
Q 023689            1 MASEAEKEEETVCVTGAN--GFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAV   78 (278)
Q Consensus         1 m~~m~~~~~~~vlItGat--G~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~   78 (278)
                      |+.+.++++|++|||||+  ++||++++++|+++|+ .|++..|+.+..+.+..+..... .+.++++|++|++++.+++
T Consensus         2 ~~~~~~~~~k~~lItGas~g~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~   79 (258)
T PRK07533          2 MQPLLPLAGKRGLVVGIANEQSIAWGCARAFRALGA-ELAVTYLNDKARPYVEPLAEELD-APIFLPLDVREPGQLEAVF   79 (258)
T ss_pred             CCcccccCCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHHHhhc-cceEEecCcCCHHHHHHHH
Confidence            555556778999999998  5999999999999999 78777776533222222211111 4567899999999888776


Q ss_pred             c-------CccEEEEecccCCC--------CCCCCchhhhhhhHHhHHHHHHHHHHhc--CCCEEEEecceeeeecCCCC
Q 023689           79 E-------GCKGVFHVASPCTL--------EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGW  141 (278)
Q Consensus        79 ~-------~~d~vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~Ss~~~~~~~~~~  141 (278)
                      +       ++|++|||||....        +...++++..+++|+.++..+.+++...  .-+++|++||..+..+.+. 
T Consensus        80 ~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~~~~~-  158 (258)
T PRK07533         80 ARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEKVVEN-  158 (258)
T ss_pred             HHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccccccCCcc-
Confidence            4       47999999986432        1223567889999999999888877442  2257999998655432221 


Q ss_pred             CCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCC
Q 023689          142 KGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSK  218 (278)
Q Consensus       142 ~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~  218 (278)
                                         ...|+.+|.+.+.+.+.++.+   +|++++++.||.+.++....... ............|
T Consensus       159 -------------------~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~p  218 (258)
T PRK07533        159 -------------------YNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDD-FDALLEDAAERAP  218 (258)
T ss_pred             -------------------chhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCC-cHHHHHHHHhcCC
Confidence                               146889999888888777754   58999999999998875332111 1122222222222


Q ss_pred             CcccccccCcccHHHHHHHHHhhhcCCC--CCceEEec
Q 023689          219 DTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLCT  254 (278)
Q Consensus       219 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~~  254 (278)
                            ...+..++|+|+++++++....  ..|..+..
T Consensus       219 ------~~r~~~p~dva~~~~~L~s~~~~~itG~~i~v  250 (258)
T PRK07533        219 ------LRRLVDIDDVGAVAAFLASDAARRLTGNTLYI  250 (258)
T ss_pred             ------cCCCCCHHHHHHHHHHHhChhhccccCcEEee
Confidence                  2346789999999999986532  34554433

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.90  E-value=1e-22  Score=163.42  Aligned_cols=220  Identities=20%  Similarity=0.187  Sum_probs=152.8

Q ss_pred             cccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccc-ccCCCCCCC-ceEEEEccCCChhhHHHHhc-
Q 023689            3 SEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL-FALPGAGDA-NLRVFEADVLDSGAVSRAVE-   79 (278)
Q Consensus         3 ~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~-~~~~~~~~~-~v~~~~~Dl~d~~~~~~~~~-   79 (278)
                      .|..+++|+|+|||||++||.+++.+|.+.|. .++...|+.+..+.+ +.+...... ++..+++|++|.+++.++++ 
T Consensus         6 ~~e~~~~kvVvITGASsGIG~~lA~~la~~G~-~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~   84 (282)
T KOG1205|consen    6 FMERLAGKVVLITGASSGIGEALAYELAKRGA-KLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEW   84 (282)
T ss_pred             cHHHhCCCEEEEeCCCcHHHHHHHHHHHhCCC-ceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHH
Confidence            35677899999999999999999999999999 666677766655555 333222222 59999999999999997764 


Q ss_pred             ------CccEEEEecccCCCCC----CCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCcc
Q 023689           80 ------GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKV  145 (278)
Q Consensus        80 ------~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~  145 (278)
                            ++|++|||||......    ...+....+++|+.|+..+.+++    ++++-++||.+||+.+..+.+..    
T Consensus        85 ~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~----  160 (282)
T KOG1205|consen   85 AIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFR----  160 (282)
T ss_pred             HHHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCcc----
Confidence                  6899999999866422    22345778999988877777666    55566799999999987765542    


Q ss_pred             ccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceE-EEecceeeCCCCCCCCchhHHHHHHHhhCCCCcc
Q 023689          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVV-AIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ  221 (278)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~-~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~  221 (278)
                                      +.|..||.+.+.+...+..+.   +..+. ++.||.|-++......           .+.... 
T Consensus       161 ----------------~~Y~ASK~Al~~f~etLR~El~~~~~~i~i~V~PG~V~Te~~~~~~-----------~~~~~~-  212 (282)
T KOG1205|consen  161 ----------------SIYSASKHALEGFFETLRQELIPLGTIIIILVSPGPIETEFTGKEL-----------LGEEGK-  212 (282)
T ss_pred             ----------------cccchHHHHHHHHHHHHHHHhhccCceEEEEEecCceeecccchhh-----------cccccc-
Confidence                            479999999998888877665   22122 5889999888543321           111000 


Q ss_pred             cccccCcccHHHHHH--HHHhhhcCCCCCc--eEEecCc
Q 023689          222 EYHWLGAVPVKDVAK--AQVLLFESPAASG--RYLCTNG  256 (278)
Q Consensus       222 ~~~~~~~i~~~D~a~--~~~~~~~~~~~~~--~~~~~~~  256 (278)
                       .........+|.+.  .+...+..+...+  .++..+.
T Consensus       213 -~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~  250 (282)
T KOG1205|consen  213 -SQQGPFLRTEDVADPEAVAYAISTPPCRQVEDIIIAPS  250 (282)
T ss_pred             -ccccchhhhhhhhhHHHHHHHHhcCcccchhheeeccc
Confidence             12234445566644  7777776665544  3555444

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.1e-22  Score=166.37  Aligned_cols=215  Identities=14%  Similarity=0.082  Sum_probs=152.6

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc---
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE---   79 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---   79 (278)
                      |+.+++|+++||||+|+||++++++|.++|++.|+++.|+.+...... .+.... ..+.++.+|+++++++.++++   
T Consensus         1 ~~~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~~~   79 (260)
T PRK06198          1 MGRLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALG-AKAVFVQADLSDVEDCRRVVAAAD   79 (260)
T ss_pred             CCCCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcC-CeEEEEEccCCCHHHHHHHHHHHH
Confidence            455677999999999999999999999999933888888654432211 111111 267889999999998888765   


Q ss_pred             ----CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHHHh----cC-CCEEEEecceeeeecCCCCCCccc
Q 023689           80 ----GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKR----FG-VRRVVVTSSISAIVPNPGWKGKVF  146 (278)
Q Consensus        80 ----~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~----~~-~~~~v~~Ss~~~~~~~~~~~~~~~  146 (278)
                          ++|++||+|+....    +...+.++..+++|+.++.++++++.+    .+ .+++|++||..++.+.+..     
T Consensus        80 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~-----  154 (260)
T PRK06198         80 EAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFL-----  154 (260)
T ss_pred             HHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCCc-----
Confidence                47999999987543    122345577899999999999887743    22 3579999997765443321     


Q ss_pred             cCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCC----CchhHHHHHHHhhCCCC
Q 023689          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPY----LNASCAVLQQLLQGSKD  219 (278)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~----~~~~~~~~~~~~~~~~~  219 (278)
                                     ..|+.+|...|.+.+.++.+.   +++++.++|+.++++.....    ......++.......+ 
T Consensus       155 ---------------~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~-  218 (260)
T PRK06198        155 ---------------AAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQP-  218 (260)
T ss_pred             ---------------chhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccCC-
Confidence                           579999999999998887654   79999999999999863211    0011122222221111 


Q ss_pred             cccccccCcccHHHHHHHHHhhhcCC
Q 023689          220 TQEYHWLGAVPVKDVAKAQVLLFESP  245 (278)
Q Consensus       220 ~~~~~~~~~i~~~D~a~~~~~~~~~~  245 (278)
                           ...+++++|+|+++.+++...
T Consensus       219 -----~~~~~~~~~~a~~~~~l~~~~  239 (260)
T PRK06198        219 -----FGRLLDPDEVARAVAFLLSDE  239 (260)
T ss_pred             -----ccCCcCHHHHHHHHHHHcChh
Confidence                 355789999999999988654

>PRK12743 oxidoreductase; Provisional

Probab=99.90  E-value=1.2e-22  Score=165.77  Aligned_cols=212  Identities=18%  Similarity=0.190  Sum_probs=148.1

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCC-CCCccc-ccCCCCCCCceEEEEccCCChhhHHHHhc-------
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG-SDSSHL-FALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~-~~~~~~-~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------   79 (278)
                      +|++|||||+|+||++++++|+++|+ .|++..++. +..+.+ ..+...+ .+++++.+|++|++++.++++       
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGF-DIGITWHSDEEGAKETAEEVRSHG-VRAEIRQLDLSDLPEGAQALDKLIQRLG   79 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcC-CceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            57999999999999999999999999 777665433 222221 1111112 278899999999998877765       


Q ss_pred             CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHhc----C-CCEEEEecceeeeecCCCCCCccccCCC
Q 023689           80 GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF----G-VRRVVVTSSISAIVPNPGWKGKVFDETS  150 (278)
Q Consensus        80 ~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~----~-~~~~v~~Ss~~~~~~~~~~~~~~~~E~~  150 (278)
                      .+|+|||+||.....    ...+.++..+++|+.++..+++++...    + .+++|++||..+..+.++          
T Consensus        80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~----------  149 (256)
T PRK12743         80 RIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPG----------  149 (256)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCC----------
Confidence            479999999875432    123456788999999999999887543    2 358999998665433222          


Q ss_pred             CCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccC
Q 023689          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (278)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (278)
                                ...|+.+|.+.+.+++.++.+   .|++++.++||.+.++......   .........+.+      ...
T Consensus       150 ----------~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~---~~~~~~~~~~~~------~~~  210 (256)
T PRK12743        150 ----------ASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDD---SDVKPDSRPGIP------LGR  210 (256)
T ss_pred             ----------cchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccC---hHHHHHHHhcCC------CCC
Confidence                      157999999999998888764   4899999999999998643221   111111222222      223


Q ss_pred             cccHHHHHHHHHhhhcCCC--CCceE
Q 023689          228 AVPVKDVAKAQVLLFESPA--ASGRY  251 (278)
Q Consensus       228 ~i~~~D~a~~~~~~~~~~~--~~~~~  251 (278)
                      +.+++|+|.++.+++....  ..|.+
T Consensus       211 ~~~~~dva~~~~~l~~~~~~~~~G~~  236 (256)
T PRK12743        211 PGDTHEIASLVAWLCSEGASYTTGQS  236 (256)
T ss_pred             CCCHHHHHHHHHHHhCccccCcCCcE
Confidence            5689999999999886543  24544

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.7e-22  Score=164.56  Aligned_cols=209  Identities=16%  Similarity=0.123  Sum_probs=146.5

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCCCCCCceEEEEccCCChhhHHHHhc-------C
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~   80 (278)
                      +|++|||||+|+||+++++.|.++|+ .|++..|+....+.... +.... .++.++++|++|++++.++++       +
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFP-GQVLTVQMDVRNPEDVQKMVEQIDEKFGR   78 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            47999999999999999999999999 88888887654333221 11111 278899999999998888764       5


Q ss_pred             ccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHHHh----cC-CCEEEEecceeeeecCCCCCCccccCCCC
Q 023689           81 CKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKR----FG-VRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (278)
Q Consensus        81 ~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~----~~-~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~  151 (278)
                      +|+|||+||....    +...+.++..+++|+.++.++++++.+    .+ .+++|++||..+..+...           
T Consensus        79 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~-----------  147 (252)
T PRK07677         79 IDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPG-----------  147 (252)
T ss_pred             ccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCC-----------
Confidence            7999999985332    223345688999999999999998843    22 368999998765433222           


Q ss_pred             CchhhhhccCchhhhHHHHHHHHHHHHHHh----cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccC
Q 023689          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK----HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (278)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~----~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (278)
                               ...|+.+|.+.+.+.+.++.+    +|+++++++||.+.++.............+......+      ...
T Consensus       148 ---------~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~------~~~  212 (252)
T PRK07677        148 ---------VIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVP------LGR  212 (252)
T ss_pred             ---------CcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhccCC------CCC
Confidence                     146888888888888776654    4899999999999864321111011222333332222      234


Q ss_pred             cccHHHHHHHHHhhhcCC
Q 023689          228 AVPVKDVAKAQVLLFESP  245 (278)
Q Consensus       228 ~i~~~D~a~~~~~~~~~~  245 (278)
                      +..++|+|+++.+++...
T Consensus       213 ~~~~~~va~~~~~l~~~~  230 (252)
T PRK07677        213 LGTPEEIAGLAYFLLSDE  230 (252)
T ss_pred             CCCHHHHHHHHHHHcCcc
Confidence            678999999998887653

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.7e-22  Score=166.41  Aligned_cols=216  Identities=22%  Similarity=0.236  Sum_probs=150.1

Q ss_pred             cccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccc--------ccCCCCCCCceEEEEccCCChhhHHH
Q 023689            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL--------FALPGAGDANLRVFEADVLDSGAVSR   76 (278)
Q Consensus         5 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~--------~~~~~~~~~~v~~~~~Dl~d~~~~~~   76 (278)
                      +.+++|++|||||+|+||++++++|.++|+ +|+++.|+.+....+        ..+...+. ++.++++|++|++++.+
T Consensus         2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~D~~~~~~i~~   79 (273)
T PRK08278          2 MSLSGKTLFITGASRGIGLAIALRAARDGA-NIVIAAKTAEPHPKLPGTIHTAAEEIEAAGG-QALPLVGDVRDEDQVAA   79 (273)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecccccccchhhHHHHHHHHHHhcCC-ceEEEEecCCCHHHHHH
Confidence            346678999999999999999999999999 888888865432111        11111112 68899999999998888


Q ss_pred             Hhc-------CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHh----cCCCEEEEecceeeeecCCCC
Q 023689           77 AVE-------GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGW  141 (278)
Q Consensus        77 ~~~-------~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~v~~Ss~~~~~~~~~~  141 (278)
                      +++       ++|+|||+||.....    ...++++..+++|+.++.++++++..    ++.+++|++||..+..+.   
T Consensus        80 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~---  156 (273)
T PRK08278         80 AVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPK---  156 (273)
T ss_pred             HHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhcccc---
Confidence            765       579999999875432    12245677899999999999998853    334679998875432211   


Q ss_pred             CCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecce-eeCCCCCCCCchhHHHHHHHhhCC
Q 023689          142 KGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPAT-CLGPLMQPYLNASCAVLQQLLQGS  217 (278)
Q Consensus       142 ~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~-i~g~~~~~~~~~~~~~~~~~~~~~  217 (278)
                               +      ......|+.+|.+.+.+.+.++.+.   +++++.+.|+. +.++....           ...+.
T Consensus       157 ---------~------~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~-----------~~~~~  210 (273)
T PRK08278        157 ---------W------FAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRN-----------LLGGD  210 (273)
T ss_pred             ---------c------cCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHh-----------ccccc
Confidence                     0      0112579999999999999988764   89999999984 44432111           00111


Q ss_pred             CCcccccccCcccHHHHHHHHHhhhcCCC--CCceEEecCc
Q 023689          218 KDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLCTNG  256 (278)
Q Consensus       218 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~~  256 (278)
                      .     ....+..++|+|+++++++....  ..|.++..++
T Consensus       211 ~-----~~~~~~~p~~va~~~~~l~~~~~~~~~G~~~~~~~  246 (273)
T PRK08278        211 E-----AMRRSRTPEIMADAAYEILSRPAREFTGNFLIDEE  246 (273)
T ss_pred             c-----cccccCCHHHHHHHHHHHhcCccccceeEEEeccc
Confidence            1     12346789999999999987643  3466655433

>PRK08324 short chain dehydrogenase; Validated

Probab=99.90  E-value=1.2e-22  Score=186.33  Aligned_cols=224  Identities=22%  Similarity=0.199  Sum_probs=157.7

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCCCCCCceEEEEccCCChhhHHHHhc------
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE------   79 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~------   79 (278)
                      +.+|++|||||+|+||++++++|.++|+ .|++++|+.+..+.... +...  .++.++.+|++|++++.++++      
T Consensus       420 l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~~r~~~~~~~~~~~l~~~--~~v~~v~~Dvtd~~~v~~~~~~~~~~~  496 (681)
T PRK08324        420 LAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLADLDEEAAEAAAAELGGP--DRALGVACDVTDEAAVQAAFEEAALAF  496 (681)
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHHhcc--CcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            4578999999999999999999999999 89999887654333222 2111  278899999999998888765      


Q ss_pred             -CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHH----HhcCC-CEEEEecceeeeecCCCCCCccccCC
Q 023689           80 -GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGV-RRVVVTSSISAIVPNPGWKGKVFDET  149 (278)
Q Consensus        80 -~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~-~~~v~~Ss~~~~~~~~~~~~~~~~E~  149 (278)
                       ++|+|||+||.....    ...+.++..+++|+.++..+++++    ++++. ++||++||..++.+.++.        
T Consensus       497 g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~~--------  568 (681)
T PRK08324        497 GGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNF--------  568 (681)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCCc--------
Confidence             589999999965431    223456788999999999997766    44454 789999997776554332        


Q ss_pred             CCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceee-CCCCCCCCchhHHHHHHHhhCCCCc-----
Q 023689          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCL-GPLMQPYLNASCAVLQQLLQGSKDT-----  220 (278)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~-g~~~~~~~~~~~~~~~~~~~~~~~~-----  220 (278)
                                  ..|+.+|...+.+.+.++.+.   |+++++++|+.+| +....... .  ...+....+....     
T Consensus       569 ------------~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~-~--~~~~~~~~g~~~~~~~~~  633 (681)
T PRK08324        569 ------------GAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGE-W--IEARAAAYGLSEEELEEF  633 (681)
T ss_pred             ------------HHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccch-h--hhhhhhhccCChHHHHHH
Confidence                        579999999999999988654   6999999999998 44321110 0  0000011111100     


Q ss_pred             c--cccccCcccHHHHHHHHHhhhc--CCCCCc-eEEecCc
Q 023689          221 Q--EYHWLGAVPVKDVAKAQVLLFE--SPAASG-RYLCTNG  256 (278)
Q Consensus       221 ~--~~~~~~~i~~~D~a~~~~~~~~--~~~~~~-~~~~~~~  256 (278)
                      +  +...+.+++++|+|+++++++.  .....| .+++.++
T Consensus       634 ~~~~~~l~~~v~~~DvA~a~~~l~s~~~~~~tG~~i~vdgG  674 (681)
T PRK08324        634 YRARNLLKREVTPEDVAEAVVFLASGLLSKTTGAIITVDGG  674 (681)
T ss_pred             HHhcCCcCCccCHHHHHHHHHHHhCccccCCcCCEEEECCC
Confidence            0  1235678999999999999884  333345 4555443

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.90  E-value=1.3e-22  Score=166.20  Aligned_cols=211  Identities=20%  Similarity=0.136  Sum_probs=149.6

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc------
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~------   79 (278)
                      .+++|+++||||+|+||++++++|+++|+ +|++..|+.+..+.+...   ...++.++++|++|.+++.++++      
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (262)
T TIGR03325         2 RLKGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAA---HGDAVVGVEGDVRSLDDHKEAVARCVAAF   77 (262)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhh---cCCceEEEEeccCCHHHHHHHHHHHHHHh
Confidence            35679999999999999999999999999 888888876543333221   11168889999999988877765      


Q ss_pred             -CccEEEEecccCCC-----CCCC----CchhhhhhhHHhHHHHHHHHHHhc---CCCEEEEecceeeeecCCCCCCccc
Q 023689           80 -GCKGVFHVASPCTL-----EDPV----DPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKVF  146 (278)
Q Consensus        80 -~~d~vi~~a~~~~~-----~~~~----~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~v~~Ss~~~~~~~~~~~~~~~  146 (278)
                       ++|++||+||....     +...    +.++..+++|+.++..+++++.+.   ..+++|++||..++.+.+..     
T Consensus        78 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~-----  152 (262)
T TIGR03325        78 GKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYPNGGG-----  152 (262)
T ss_pred             CCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecCCCCC-----
Confidence             57999999986421     1111    246789999999999999988543   22579999887776543321     


Q ss_pred             cCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc--CCceEEEecceeeCCCCCCC-CchhHH-----HHHHHhhCCC
Q 023689          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQPY-LNASCA-----VLQQLLQGSK  218 (278)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~~~~~~lrp~~i~g~~~~~~-~~~~~~-----~~~~~~~~~~  218 (278)
                                     ..|+.+|.+.+.+.+.++.+.  .++++.+.||.+.++..... ......     ...+......
T Consensus       153 ---------------~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (262)
T TIGR03325       153 ---------------PLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVL  217 (262)
T ss_pred             ---------------chhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCCccccccccccccccccchhhhhhhcC
Confidence                           469999999999999988764  48999999999998854321 000000     0111111111


Q ss_pred             CcccccccCcccHHHHHHHHHhhhcCC
Q 023689          219 DTQEYHWLGAVPVKDVAKAQVLLFESP  245 (278)
Q Consensus       219 ~~~~~~~~~~i~~~D~a~~~~~~~~~~  245 (278)
                           ....+..++|+|+++++++...
T Consensus       218 -----p~~r~~~p~eva~~~~~l~s~~  239 (262)
T TIGR03325       218 -----PIGRMPDAEEYTGAYVFFATRG  239 (262)
T ss_pred             -----CCCCCCChHHhhhheeeeecCC
Confidence                 1345678999999999988753

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.7e-22  Score=163.03  Aligned_cols=201  Identities=19%  Similarity=0.164  Sum_probs=147.1

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      .+.+++++||||+|+||++++++|+++|+ .|++++|++.....+. .+...  .+++++++|++|.+++.++++     
T Consensus         3 ~~~~~~ilItGatg~iG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (237)
T PRK07326          3 SLKGKVALITGGSKGIGFAIAEALLAEGY-KVAITARDQKELEEAAAELNNK--GNVLGLAADVRDEADVQRAVDAIVAA   79 (237)
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEeeCCHHHHHHHHHHHhcc--CcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            34568999999999999999999999999 8999998765433221 11111  278899999999998888775     


Q ss_pred             --CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHh---cCCCEEEEecceeeeecCCCCCCccccCCC
Q 023689           80 --GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR---FGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (278)
Q Consensus        80 --~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~  150 (278)
                        ++|+|||+++.....    ...+++...+++|+.++..+++++.+   .+.+++|++||..+..+...          
T Consensus        80 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~----------  149 (237)
T PRK07326         80 FGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNFFAG----------  149 (237)
T ss_pred             cCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccCCCC----------
Confidence              689999999865432    12334567899999999998888754   24578999998765433221          


Q ss_pred             CCchhhhhccCchhhhHHHHHHHHHHHHHH---hcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccC
Q 023689          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (278)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (278)
                                ...|+.+|...+.+.+.++.   ..|++++++||+.+.++.......            .      ....
T Consensus       150 ----------~~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~~------------~------~~~~  201 (237)
T PRK07326        150 ----------GAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTPS------------E------KDAW  201 (237)
T ss_pred             ----------CchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcccccccc------------h------hhhc
Confidence                      14699999988888877753   359999999999998775322100            0      0012


Q ss_pred             cccHHHHHHHHHhhhcCCCC
Q 023689          228 AVPVKDVAKAQVLLFESPAA  247 (278)
Q Consensus       228 ~i~~~D~a~~~~~~~~~~~~  247 (278)
                      .+.++|+++.++.++..+..
T Consensus       202 ~~~~~d~a~~~~~~l~~~~~  221 (237)
T PRK07326        202 KIQPEDIAQLVLDLLKMPPR  221 (237)
T ss_pred             cCCHHHHHHHHHHHHhCCcc
Confidence            37899999999999987654

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.90  E-value=2.7e-22  Score=164.12  Aligned_cols=224  Identities=14%  Similarity=0.138  Sum_probs=149.8

Q ss_pred             ccccCCceEEEeCc--chhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc--
Q 023689            4 EAEKEEETVCVTGA--NGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--   79 (278)
Q Consensus         4 m~~~~~~~vlItGa--tG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--   79 (278)
                      |..+++|++|||||  +++||++++++|.++|+ .|++..|+....+.+.++..... ....+++|++|+++++++++  
T Consensus         1 ~~~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~   78 (261)
T PRK08690          1 MGFLQGKKILITGMISERSIAYGIAKACREQGA-ELAFTYVVDKLEERVRKMAAELD-SELVFRCDVASDDEINQVFADL   78 (261)
T ss_pred             CCccCCcEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHhccC-CceEEECCCCCHHHHHHHHHHH
Confidence            44567789999997  67999999999999999 77776654322222322221111 34578999999999888774  


Q ss_pred             -----CccEEEEecccCCCC---------CCCCchhhhhhhHHhHHHHHHHHHHhc---CCCEEEEecceeeeecCCCCC
Q 023689           80 -----GCKGVFHVASPCTLE---------DPVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWK  142 (278)
Q Consensus        80 -----~~d~vi~~a~~~~~~---------~~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~v~~Ss~~~~~~~~~~~  142 (278)
                           ++|++|||||.....         ...+.++..+++|+.++..+.+++...   +.+++|++||..+..+.++. 
T Consensus        79 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~~~~~~-  157 (261)
T PRK08690         79 GKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAIPNY-  157 (261)
T ss_pred             HHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccccccCCCCc-
Confidence                 579999999975421         112345677889998887777765331   22679999987765443321 


Q ss_pred             CccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHH---hcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCC
Q 023689          143 GKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKD  219 (278)
Q Consensus       143 ~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~  219 (278)
                                         ..|+.+|...+.+.+.++.   .+|++++++.||.+-++....... ............| 
T Consensus       158 -------------------~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~-~~~~~~~~~~~~p-  216 (261)
T PRK08690        158 -------------------NVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIAD-FGKLLGHVAAHNP-  216 (261)
T ss_pred             -------------------ccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCc-hHHHHHHHhhcCC-
Confidence                               5699999998888777764   458999999999998875322111 1112222222222 


Q ss_pred             cccccccCcccHHHHHHHHHhhhcCCC--CCceEEecCc
Q 023689          220 TQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLCTNG  256 (278)
Q Consensus       220 ~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~~  256 (278)
                           ...+..++|+|+++++++....  ..|..+..++
T Consensus       217 -----~~r~~~peevA~~v~~l~s~~~~~~tG~~i~vdg  250 (261)
T PRK08690        217 -----LRRNVTIEEVGNTAAFLLSDLSSGITGEITYVDG  250 (261)
T ss_pred             -----CCCCCCHHHHHHHHHHHhCcccCCcceeEEEEcC
Confidence                 2447789999999999987543  3455444333

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.6e-22  Score=167.99  Aligned_cols=200  Identities=15%  Similarity=0.130  Sum_probs=145.5

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      .+++|++|||||+|+||++++++|.++|+ +|+++.|+.+..+.+.. +..... .+.++++|++|++++.++++     
T Consensus        37 ~~~~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~-~~~~~~~Dl~d~~~v~~~~~~~~~~  114 (293)
T PRK05866         37 DLTGKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGG-DAMAVPCDLSDLDAVDALVADVEKR  114 (293)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHH
Confidence            34568999999999999999999999999 89999987654332221 111111 67899999999999888876     


Q ss_pred             --CccEEEEecccCCCCCC------CCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeec-CCCCCCccc
Q 023689           80 --GCKGVFHVASPCTLEDP------VDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVP-NPGWKGKVF  146 (278)
Q Consensus        80 --~~d~vi~~a~~~~~~~~------~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~-~~~~~~~~~  146 (278)
                        ++|++||+||.......      ...++..+++|+.++.++++++    ++.+.+++|++||.+++.. .+.      
T Consensus       115 ~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~p~------  188 (293)
T PRK05866        115 IGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEASPL------  188 (293)
T ss_pred             cCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCC------
Confidence              68999999987544221      1234678899999887777755    4566789999998544321 111      


Q ss_pred             cCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccc
Q 023689          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (278)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (278)
                                    ...|+.+|.+.+.+.+.++.+   +|+++++++||.+-++......           ..       
T Consensus       189 --------------~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~~-----------~~-------  236 (293)
T PRK05866        189 --------------FSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPTK-----------AY-------  236 (293)
T ss_pred             --------------cchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccccc-----------cc-------
Confidence                          257999999999888877654   4899999999988887533210           00       


Q ss_pred             cccCcccHHHHHHHHHhhhcCC
Q 023689          224 HWLGAVPVKDVAKAQVLLFESP  245 (278)
Q Consensus       224 ~~~~~i~~~D~a~~~~~~~~~~  245 (278)
                      .....+.++++|+.++.++++.
T Consensus       237 ~~~~~~~pe~vA~~~~~~~~~~  258 (293)
T PRK05866        237 DGLPALTADEAAEWMVTAARTR  258 (293)
T ss_pred             cCCCCCCHHHHHHHHHHHHhcC
Confidence            0122468999999999999864

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.90  E-value=4.1e-22  Score=162.65  Aligned_cols=222  Identities=15%  Similarity=0.101  Sum_probs=150.1

Q ss_pred             ccccCCceEEEeCcc--hhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCC-CCCceEEEEccCCChhhHHHHhc-
Q 023689            4 EAEKEEETVCVTGAN--GFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGA-GDANLRVFEADVLDSGAVSRAVE-   79 (278)
Q Consensus         4 m~~~~~~~vlItGat--G~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~~~~~~~-   79 (278)
                      |..+++|+++||||+  ++||++++++|.++|+ .|++..|+....+.+.++... ...++.++++|++|+++++++++ 
T Consensus         2 ~~~~~~k~~lItGa~~s~GIG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~   80 (257)
T PRK08594          2 MLSLEGKTYVVMGVANKRSIAWGIARSLHNAGA-KLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFET   80 (257)
T ss_pred             ccccCCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHH
Confidence            445678999999997  8999999999999999 787776653322222221110 11268899999999998888764 


Q ss_pred             ------CccEEEEecccCCC--------CCCCCchhhhhhhHHhHHHHHHHHHHhc--CCCEEEEecceeeeecCCCCCC
Q 023689           80 ------GCKGVFHVASPCTL--------EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKG  143 (278)
Q Consensus        80 ------~~d~vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~  143 (278)
                            ++|++|||||....        +...+.+...+++|+.+...+++++...  ..+++|++||..+..+.+..  
T Consensus        81 ~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~--  158 (257)
T PRK08594         81 IKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERVVQNY--  158 (257)
T ss_pred             HHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccCCCCC--
Confidence                  47999999986431        1223456778899999988877776543  23689999997765433221  


Q ss_pred             ccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCc
Q 023689          144 KVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT  220 (278)
Q Consensus       144 ~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~  220 (278)
                                        ..|+.+|.+.+.+.+.++.+   +|++++++.||.+.++....... ............|  
T Consensus       159 ------------------~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~p--  217 (257)
T PRK08594        159 ------------------NVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGG-FNSILKEIEERAP--  217 (257)
T ss_pred             ------------------chhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhcc-ccHHHHHHhhcCC--
Confidence                              46899999998888887764   48999999999998874221100 0111111111111  


Q ss_pred             ccccccCcccHHHHHHHHHhhhcCCC--CCceEEe
Q 023689          221 QEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLC  253 (278)
Q Consensus       221 ~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~  253 (278)
                          ...+..++|+|+++++++....  ..|..+.
T Consensus       218 ----~~r~~~p~~va~~~~~l~s~~~~~~tG~~~~  248 (257)
T PRK08594        218 ----LRRTTTQEEVGDTAAFLFSDLSRGVTGENIH  248 (257)
T ss_pred             ----ccccCCHHHHHHHHHHHcCcccccccceEEE
Confidence                2346789999999999986543  2455443

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.90  E-value=2.8e-22  Score=163.63  Aligned_cols=208  Identities=17%  Similarity=0.137  Sum_probs=144.6

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      .+++|+||||||+|+||++++++|.++|+ .|+++.|+....+... .+      ...++++|++|++++.++++     
T Consensus         4 ~~~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~------~~~~~~~D~~~~~~~~~~~~~~~~~   76 (255)
T PRK06057          4 RLAGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPEAGKAAADEV------GGLFVPTDVTDEDAVNALFDTAAET   76 (255)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHc------CCcEEEeeCCCHHHHHHHHHHHHHH
Confidence            45679999999999999999999999999 8888888765432221 11      23578899999998888775     


Q ss_pred             --CccEEEEecccCCCC------CCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCcccc
Q 023689           80 --GCKGVFHVASPCTLE------DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFD  147 (278)
Q Consensus        80 --~~d~vi~~a~~~~~~------~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~  147 (278)
                        ++|+|||+||.....      ...+.++..+++|+.++..+++.+    ++.+.+++|++||..+.++.+..      
T Consensus        77 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~~------  150 (255)
T PRK06057         77 YGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATS------  150 (255)
T ss_pred             cCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCCC------
Confidence              579999999864321      122346788999999988777665    34455789999986665543210      


Q ss_pred             CCCCCchhhhhccCchhhhHHHHHHHHHHHHHH---hcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccc
Q 023689          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (278)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (278)
                                   ...|+.+|.+.+.+.+.++.   ..|+++++++||.+.++..............+.....    +  
T Consensus       151 -------------~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~----~--  211 (255)
T PRK06057        151 -------------QISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARRLVHV----P--  211 (255)
T ss_pred             -------------CcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHHhcC----C--
Confidence                         14699999877766665544   3489999999999998864332111111111111111    1  


Q ss_pred             ccCcccHHHHHHHHHhhhcCC
Q 023689          225 WLGAVPVKDVAKAQVLLFESP  245 (278)
Q Consensus       225 ~~~~i~~~D~a~~~~~~~~~~  245 (278)
                      ...+.+++|+++++..++...
T Consensus       212 ~~~~~~~~~~a~~~~~l~~~~  232 (255)
T PRK06057        212 MGRFAEPEEIAAAVAFLASDD  232 (255)
T ss_pred             CCCCcCHHHHHHHHHHHhCcc
Confidence            235789999999998887653

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.90  E-value=9.4e-22  Score=158.66  Aligned_cols=206  Identities=20%  Similarity=0.151  Sum_probs=145.9

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCc-ccccCCCCCCCceEEEEccCCChhhHHHHhc-------C
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS-HLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~-~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~   80 (278)
                      +|++|||||+|+||++++++|.++|+ +|++..|+++... .+...      +++++.+|++|++++.++++       +
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~------~~~~~~~D~~~~~~~~~~~~~~~~~~~~   74 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQ-PVIVSYRTHYPAIDGLRQA------GAQCIQADFSTNAGIMAFIDELKQHTDG   74 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHc------CCEEEEcCCCCHHHHHHHHHHHHhhCCC
Confidence            36999999999999999999999999 8888888764321 11111      46789999999988877664       4


Q ss_pred             ccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHh----cC--CCEEEEecceeeeecCCCCCCccccCCC
Q 023689           81 CKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FG--VRRVVVTSSISAIVPNPGWKGKVFDETS  150 (278)
Q Consensus        81 ~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~----~~--~~~~v~~Ss~~~~~~~~~~~~~~~~E~~  150 (278)
                      +|++||+||.....    ...++++..+++|+.++..+.+++.+    .+  .+++|++||..+..+.+.          
T Consensus        75 id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~----------  144 (236)
T PRK06483         75 LRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDK----------  144 (236)
T ss_pred             ccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCC----------
Confidence            79999999864332    12346788899999988876665533    33  468999998665433222          


Q ss_pred             CCchhhhhccCchhhhHHHHHHHHHHHHHHhc--CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCc
Q 023689          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (278)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (278)
                                ...|+.+|...+.+.+.++.+.  ++++++++||.+..+....     ...........+      ...+
T Consensus       145 ----------~~~Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~~-----~~~~~~~~~~~~------~~~~  203 (236)
T PRK06483        145 ----------HIAYAASKAALDNMTLSFAAKLAPEVKVNSIAPALILFNEGDD-----AAYRQKALAKSL------LKIE  203 (236)
T ss_pred             ----------CccHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCceecCCCCC-----HHHHHHHhccCc------cccC
Confidence                      1579999999999999998864  6999999999986543211     111122222222      1224


Q ss_pred             ccHHHHHHHHHhhhcCCCCCceEE
Q 023689          229 VPVKDVAKAQVLLFESPAASGRYL  252 (278)
Q Consensus       229 i~~~D~a~~~~~~~~~~~~~~~~~  252 (278)
                      ..++|+|+++.+++.+....|..+
T Consensus       204 ~~~~~va~~~~~l~~~~~~~G~~i  227 (236)
T PRK06483        204 PGEEEIIDLVDYLLTSCYVTGRSL  227 (236)
T ss_pred             CCHHHHHHHHHHHhcCCCcCCcEE
Confidence            578999999999997544556443

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=99.89  E-value=1.3e-22  Score=172.43  Aligned_cols=263  Identities=21%  Similarity=0.234  Sum_probs=179.3

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCC--CCeEEEEecCCCCCcccccC----------------CCCCCCceEEEEccC
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNN--YTSINATVFPGSDSSHLFAL----------------PGAGDANLRVFEADV   68 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g--~~~v~~~~r~~~~~~~~~~~----------------~~~~~~~v~~~~~Dl   68 (278)
                      +++|+|||||||||+|+-++++|++.-  ...+..+.|.....+..+.+                +...+ ++..+.||+
T Consensus        10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~-Kv~pi~GDi   88 (467)
T KOG1221|consen   10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALE-KVVPIAGDI   88 (467)
T ss_pred             hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCcccee-cceeccccc
Confidence            468999999999999999999999863  35788888866544222211                11112 788999999


Q ss_pred             CCh------hhHHHHhcCccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhc-CCCEEEEecceeeeecCCCC
Q 023689           69 LDS------GAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-GVRRVVVTSSISAIVPNPGW  141 (278)
Q Consensus        69 ~d~------~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~v~~Ss~~~~~~~~~~  141 (278)
                      .++      ..++...+.+|+|||+|+-..+   .+..+....+|+.|++++++.|++. +.+.++++||...-......
T Consensus        89 ~~~~LGis~~D~~~l~~eV~ivih~AAtvrF---de~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~i  165 (467)
T KOG1221|consen   89 SEPDLGISESDLRTLADEVNIVIHSAATVRF---DEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGHI  165 (467)
T ss_pred             cCcccCCChHHHHHHHhcCCEEEEeeeeecc---chhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheecccccc
Confidence            876      4566678899999999997665   3556789999999999999999887 58899999997765221111


Q ss_pred             CCccccCCCCCchh--------------------hhhccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCC
Q 023689          142 KGKVFDETSWTDLE--------------------YCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQP  201 (278)
Q Consensus       142 ~~~~~~E~~~~~~~--------------------~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~  201 (278)
                      .+.++.+.....+.                    ......+.|..+|+++|.++...  ..+++++|+||+.|......+
T Consensus       166 ~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~--~~~lPivIiRPsiI~st~~EP  243 (467)
T KOG1221|consen  166 EEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKE--AENLPLVIIRPSIITSTYKEP  243 (467)
T ss_pred             cccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhh--ccCCCeEEEcCCceeccccCC
Confidence            22222222111110                    11112367999999999999866  458999999999999877655


Q ss_pred             CCchhHH------HHHHHhhCCCCcc---cccccCcccHHHHHHHHHhhhcC----CCC--CceEEecC---ccccHHHH
Q 023689          202 YLNASCA------VLQQLLQGSKDTQ---EYHWLGAVPVKDVAKAQVLLFES----PAA--SGRYLCTN---GIYQFGDF  263 (278)
Q Consensus       202 ~~~~~~~------~~~~~~~~~~~~~---~~~~~~~i~~~D~a~~~~~~~~~----~~~--~~~~~~~~---~~~s~~e~  263 (278)
                      ...++..      ++-....|.....   ++...+.|++|.|+.+++.+...    ...  ..+|+++.   .+++|.++
T Consensus       244 ~pGWidn~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~Np~t~~~~  323 (467)
T KOG1221|consen  244 FPGWIDNLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDNPVTWGDF  323 (467)
T ss_pred             CCCccccCCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccCcccHHHH
Confidence            4322211      1111122221111   34789999999999999877632    111  22686543   26899999


Q ss_pred             HHHHHHhCCCCC
Q 023689          264 AERVSKLFPEFP  275 (278)
Q Consensus       264 ~~~i~~~~~~~~  275 (278)
                      .+...+.+.+.|
T Consensus       324 ~e~~~~~~~~~P  335 (467)
T KOG1221|consen  324 IELALRYFEKIP  335 (467)
T ss_pred             HHHHHHhcccCC
Confidence            999999886544

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.9e-22  Score=163.43  Aligned_cols=197  Identities=15%  Similarity=0.091  Sum_probs=145.3

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc----CccE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE----GCKG   83 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~----~~d~   83 (278)
                      ||+++||||+|+||.++++.|+++|+ .|++++|+++..+... .+......+++++++|++|++++.++++    .+|+
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~   79 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAAGA-RLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDI   79 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCE
Confidence            57999999999999999999999999 8999988765433221 1111112278999999999998888766    4699


Q ss_pred             EEEecccCCCCC----CCCchhhhhhhHHhHHHHHHHHHHh----cCCCEEEEecceeeeecCCCCCCccccCCCCCchh
Q 023689           84 VFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLE  155 (278)
Q Consensus        84 vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~  155 (278)
                      +||++|......    ..+++...+++|+.++.++++++..    .+.+++|++||..+..+.++.              
T Consensus        80 vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~--------------  145 (243)
T PRK07102         80 VLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRASN--------------  145 (243)
T ss_pred             EEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCCCC--------------
Confidence            999998644321    2233456789999999988887644    456889999997665443321              


Q ss_pred             hhhccCchhhhHHHHHHHHHHHHHH---hcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHH
Q 023689          156 YCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVK  232 (278)
Q Consensus       156 ~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  232 (278)
                            ..|+.+|...+.+.+.++.   +.|+++++++|+.++++.....             ..+      ....++++
T Consensus       146 ------~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~-------------~~~------~~~~~~~~  200 (243)
T PRK07102        146 ------YVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGL-------------KLP------GPLTAQPE  200 (243)
T ss_pred             ------cccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhhcc-------------CCC------ccccCCHH
Confidence                  4699999999988888764   4489999999999998743211             000      12357899


Q ss_pred             HHHHHHHhhhcCC
Q 023689          233 DVAKAQVLLFESP  245 (278)
Q Consensus       233 D~a~~~~~~~~~~  245 (278)
                      |+|+.++.+++++
T Consensus       201 ~~a~~i~~~~~~~  213 (243)
T PRK07102        201 EVAKDIFRAIEKG  213 (243)
T ss_pred             HHHHHHHHHHhCC
Confidence            9999999998864

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.89  E-value=3.9e-22  Score=161.92  Aligned_cols=207  Identities=16%  Similarity=0.139  Sum_probs=144.4

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEec-CCCCC-cccccCCCCCCCceEEEEccCCChhhHHHHhc------
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVF-PGSDS-SHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r-~~~~~-~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~------   79 (278)
                      ++|++|||||+|+||++++++|.++|+ .|++..+ +.... +.+..+.... .++..+.+|++|.+++.++++      
T Consensus         2 ~~k~~lVtG~s~giG~~~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   79 (246)
T PRK12938          2 SQRIAYVTGGMGGIGTSICQRLHKDGF-KVVAGCGPNSPRRVKWLEDQKALG-FDFIASEGNVGDWDSTKAAFDKVKAEV   79 (246)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            368999999999999999999999999 6766543 22211 1112111111 167788999999998887765      


Q ss_pred             -CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccCCC
Q 023689           80 -GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (278)
Q Consensus        80 -~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~  150 (278)
                       ++|+|||+||....    +...++++..+++|+.++..+++++    ++.+.+++|++||..+..+.++.         
T Consensus        80 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~---------  150 (246)
T PRK12938         80 GEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQ---------  150 (246)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCCCC---------
Confidence             57999999987542    2233567888999999977655544    55667899999997665443221         


Q ss_pred             CCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccC
Q 023689          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (278)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (278)
                                 ..|+.+|.+.+.+.+.++++   .++++++++||.+.++.....   ............+      ...
T Consensus       151 -----------~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~---~~~~~~~~~~~~~------~~~  210 (246)
T PRK12938        151 -----------TNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAI---RPDVLEKIVATIP------VRR  210 (246)
T ss_pred             -----------hhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhc---ChHHHHHHHhcCC------ccC
Confidence                       57999999888887777654   589999999999998864322   1222223222222      344


Q ss_pred             cccHHHHHHHHHhhhcCC
Q 023689          228 AVPVKDVAKAQVLLFESP  245 (278)
Q Consensus       228 ~i~~~D~a~~~~~~~~~~  245 (278)
                      +..++|+++++.+++...
T Consensus       211 ~~~~~~v~~~~~~l~~~~  228 (246)
T PRK12938        211 LGSPDEIGSIVAWLASEE  228 (246)
T ss_pred             CcCHHHHHHHHHHHcCcc
Confidence            678999999999887653

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.89  E-value=3.3e-22  Score=163.36  Aligned_cols=215  Identities=16%  Similarity=0.207  Sum_probs=144.3

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCC-CCcccc----cCCCCCCCceEEEEccCCChhhHHHHh
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS-DSSHLF----ALPGAGDANLRVFEADVLDSGAVSRAV   78 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~-~~~~~~----~~~~~~~~~v~~~~~Dl~d~~~~~~~~   78 (278)
                      ++.+++|++|||||+|+||++++++|+++|+ .|+.+.++.. ..+...    .+.... .+++++++|++|++++.+++
T Consensus         3 ~~~l~~k~vlItGa~~gIG~~~a~~l~~~G~-~vv~i~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~~~~~~   80 (257)
T PRK12744          3 DHSLKGKVVLIAGGAKNLGGLIARDLAAQGA-KAVAIHYNSAASKADAEETVAAVKAAG-AKAVAFQADLTTAAAVEKLF   80 (257)
T ss_pred             CCCCCCcEEEEECCCchHHHHHHHHHHHCCC-cEEEEecCCccchHHHHHHHHHHHHhC-CcEEEEecCcCCHHHHHHHH
Confidence            3346679999999999999999999999999 6555554332 111111    111111 26889999999999988876


Q ss_pred             c-------CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHHHhc--CCCEEEEe-cceeeeecCCCCCCc
Q 023689           79 E-------GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVT-SSISAIVPNPGWKGK  144 (278)
Q Consensus        79 ~-------~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~-Ss~~~~~~~~~~~~~  144 (278)
                      +       ++|++||+||....    +...+.++..+++|+.++..+++++.+.  ..++++++ ||..+.+. +.    
T Consensus        81 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~-~~----  155 (257)
T PRK12744         81 DDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFT-PF----  155 (257)
T ss_pred             HHHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccC-CC----
Confidence            5       57999999997432    2233467888999999999999988654  12456665 44333221 11    


Q ss_pred             cccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcc
Q 023689          145 VFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ  221 (278)
Q Consensus       145 ~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~  221 (278)
                                      ...|+.+|.+.+.+.+.++++.   |+++++++||.+.++...+... . .... .........
T Consensus       156 ----------------~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~-~-~~~~-~~~~~~~~~  216 (257)
T PRK12744        156 ----------------YSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEG-A-EAVA-YHKTAAALS  216 (257)
T ss_pred             ----------------cccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccc-c-chhh-ccccccccc
Confidence                            1579999999999999998764   7999999999998875322110 0 0000 000000001


Q ss_pred             cccccCcccHHHHHHHHHhhhcC
Q 023689          222 EYHWLGAVPVKDVAKAQVLLFES  244 (278)
Q Consensus       222 ~~~~~~~i~~~D~a~~~~~~~~~  244 (278)
                      +.....+.+++|+|.++.+++..
T Consensus       217 ~~~~~~~~~~~dva~~~~~l~~~  239 (257)
T PRK12744        217 PFSKTGLTDIEDIVPFIRFLVTD  239 (257)
T ss_pred             ccccCCCCCHHHHHHHHHHhhcc
Confidence            11223578999999999999885

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.89  E-value=2.8e-22  Score=161.12  Aligned_cols=214  Identities=19%  Similarity=0.132  Sum_probs=153.0

Q ss_pred             EEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhcC---ccEEEEec
Q 023689           13 CVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVEG---CKGVFHVA   88 (278)
Q Consensus        13 lItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~---~d~vi~~a   88 (278)
                      |||||+|+||++++++|+++|+ .|++..|+.+...... .+. . ..+++++.+|++|++++.++++.   +|++||++
T Consensus         1 lItGas~~iG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~-~-~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~a   77 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGA-RVTIASRSRDRLAAAARALG-G-GAPVRTAALDITDEAAVDAFFAEAGPFDHVVITA   77 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHh-c-CCceEEEEccCCCHHHHHHHHHhcCCCCEEEECC
Confidence            6999999999999999999999 8988888754432221 111 1 12788999999999999998874   79999999


Q ss_pred             ccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchh
Q 023689           89 SPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWY  164 (278)
Q Consensus        89 ~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y  164 (278)
                      +.....    ...++++..+++|+.++.+++++....+.+++|++||..++.+.+..                    ..|
T Consensus        78 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~~~~~~--------------------~~Y  137 (230)
T PRK07041         78 ADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVRPSASG--------------------VLQ  137 (230)
T ss_pred             CCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcCCCCcc--------------------hHH
Confidence            875432    12346788899999999999996665566899999997775543321                    579


Q ss_pred             hhHHHHHHHHHHHHHHhc-CCceEEEecceeeCCCCCCCCc-hhHHHHHHHhhCCCCcccccccCcccHHHHHHHHHhhh
Q 023689          165 PVSKTLAEKAAWEFAEKH-GVDVVAIHPATCLGPLMQPYLN-ASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLF  242 (278)
Q Consensus       165 ~~sK~~~e~~~~~~~~~~-~~~~~~lrp~~i~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  242 (278)
                      +.+|.+.+.+.+.++.+. ++++++++|+.+.++....... .............+      ...+.+++|+|+++..++
T Consensus       138 ~~sK~a~~~~~~~la~e~~~irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~dva~~~~~l~  211 (230)
T PRK07041        138 GAINAALEALARGLALELAPVRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLP------ARRVGQPEDVANAILFLA  211 (230)
T ss_pred             HHHHHHHHHHHHHHHHHhhCceEEEEeecccccHHHHhhhccchHHHHHHHHhcCC------CCCCcCHHHHHHHHHHHh
Confidence            999999999998888664 6899999999987765321100 11112222222222      123457899999999999


Q ss_pred             cCCCCCc-eEEecC
Q 023689          243 ESPAASG-RYLCTN  255 (278)
Q Consensus       243 ~~~~~~~-~~~~~~  255 (278)
                      .+....| .|.+.+
T Consensus       212 ~~~~~~G~~~~v~g  225 (230)
T PRK07041        212 ANGFTTGSTVLVDG  225 (230)
T ss_pred             cCCCcCCcEEEeCC
Confidence            8654545 455443

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.89  E-value=2.3e-22  Score=166.66  Aligned_cols=220  Identities=19%  Similarity=0.170  Sum_probs=149.8

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCC---------CCCccc-ccCCCCCCCceEEEEccCCChhh
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG---------SDSSHL-FALPGAGDANLRVFEADVLDSGA   73 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~---------~~~~~~-~~~~~~~~~~v~~~~~Dl~d~~~   73 (278)
                      |..+++|++|||||+++||++++++|.+.|+ .|++..++.         +..... ..+...+. ++.++.+|++|+++
T Consensus         1 m~~l~~k~~lITGas~GIG~aia~~la~~G~-~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~Dv~~~~~   78 (286)
T PRK07791          1 MGLLDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGG-EAVANGDDIADWDG   78 (286)
T ss_pred             CCccCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeeCCccccccccchhHHHHHHHHHHhcCC-ceEEEeCCCCCHHH
Confidence            3456789999999999999999999999999 777776653         111111 11211122 67889999999988


Q ss_pred             HHHHhc-------CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHHH----hcC------CCEEEEecce
Q 023689           74 VSRAVE-------GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAK----RFG------VRRVVVTSSI  132 (278)
Q Consensus        74 ~~~~~~-------~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~------~~~~v~~Ss~  132 (278)
                      +.++++       ++|++|||||....    +...+.++..+++|+.++..+++++.    +..      .++||++||.
T Consensus        79 v~~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~  158 (286)
T PRK07791         79 AANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSG  158 (286)
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCch
Confidence            887764       57999999997542    22335678899999999988877763    221      2589999998


Q ss_pred             eeeecCCCCCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHH
Q 023689          133 SAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAV  209 (278)
Q Consensus       133 ~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~  209 (278)
                      ++..+.++.                    ..|+.+|.+.+.+.+.++.+   +|++++.|.|+ +.++...       ..
T Consensus       159 ~~~~~~~~~--------------------~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~-------~~  210 (286)
T PRK07791        159 AGLQGSVGQ--------------------GNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTE-------TV  210 (286)
T ss_pred             hhCcCCCCc--------------------hhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcch-------hh
Confidence            876654432                    56999999988888877764   58999999998 5443211       11


Q ss_pred             HHHHhhCCCCcccccccCcccHHHHHHHHHhhhcCCC--CCceEE-ecCcc
Q 023689          210 LQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYL-CTNGI  257 (278)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~-~~~~~  257 (278)
                      ........+    .....+..++|+|+++++++....  ..|.++ +.++.
T Consensus       211 ~~~~~~~~~----~~~~~~~~pedva~~~~~L~s~~~~~itG~~i~vdgG~  257 (286)
T PRK07791        211 FAEMMAKPE----EGEFDAMAPENVSPLVVWLGSAESRDVTGKVFEVEGGK  257 (286)
T ss_pred             HHHHHhcCc----ccccCCCCHHHHHHHHHHHhCchhcCCCCcEEEEcCCc
Confidence            111111111    112245789999999999986532  356554 43443

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.89  E-value=4.1e-22  Score=161.95  Aligned_cols=197  Identities=21%  Similarity=0.142  Sum_probs=146.1

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCCC-CCCceEEEEccCCChhhHHHHhc-------
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGA-GDANLRVFEADVLDSGAVSRAVE-------   79 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~~-~~~~v~~~~~Dl~d~~~~~~~~~-------   79 (278)
                      +|++|||||+|+||++++++|+++|+ .|++..|+++..+.+.. +... ...+++++++|++|++++.++++       
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELG   80 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            47899999999999999999999998 88888887654332211 1110 11278899999999988877665       


Q ss_pred             CccEEEEecccCCCCC----CCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccCCCC
Q 023689           80 GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (278)
Q Consensus        80 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~  151 (278)
                      ++|++||+||......    ..+.+...+++|+.++.++++++    ++.+.++||++||..+..+.+..          
T Consensus        81 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~----------  150 (248)
T PRK08251         81 GLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPGV----------  150 (248)
T ss_pred             CCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCCCC----------
Confidence            5899999998754421    22344677899999998888876    34567799999997776553321          


Q ss_pred             CchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCc
Q 023689          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (278)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (278)
                               ...|+.+|...+.+.+.++.+   .++++++++||.+.++.....             +.       ....
T Consensus       151 ---------~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~-------------~~-------~~~~  201 (248)
T PRK08251        151 ---------KAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKA-------------KS-------TPFM  201 (248)
T ss_pred             ---------cccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhcc-------------cc-------CCcc
Confidence                     146999999999888877764   379999999999988753221             00       1235


Q ss_pred             ccHHHHHHHHHhhhcCC
Q 023689          229 VPVKDVAKAQVLLFESP  245 (278)
Q Consensus       229 i~~~D~a~~~~~~~~~~  245 (278)
                      ++.+|.|++++.++++.
T Consensus       202 ~~~~~~a~~i~~~~~~~  218 (248)
T PRK08251        202 VDTETGVKALVKAIEKE  218 (248)
T ss_pred             CCHHHHHHHHHHHHhcC
Confidence            78999999999999764

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.89  E-value=7.8e-22  Score=160.62  Aligned_cols=198  Identities=15%  Similarity=0.170  Sum_probs=140.3

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCC-CCeEEEEecCCCC-Cccc-ccCCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNN-YTSINATVFPGSD-SSHL-FALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g-~~~v~~~~r~~~~-~~~~-~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      +.|+||||||+|+||++++++|+++| + .|++..|+.+. .+.+ ..+......+++++.+|++|++++.++++     
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   85 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAG   85 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhc
Confidence            45799999999999999999999995 7 88888887664 2221 12221122268999999999988666554     


Q ss_pred             -CccEEEEecccCCCC-CCCCch---hhhhhhHHhHHHH----HHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCC
Q 023689           80 -GCKGVFHVASPCTLE-DPVDPE---KELILPAVQGTLN----VLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (278)
Q Consensus        80 -~~d~vi~~a~~~~~~-~~~~~~---~~~~~~n~~~~~~----ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~  150 (278)
                       ++|++||++|..... ....+.   .+.+++|+.++..    +++++++++.++||++||..+..+.+.          
T Consensus        86 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~~~----------  155 (253)
T PRK07904         86 GDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVRRS----------  155 (253)
T ss_pred             CCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCCCC----------
Confidence             689999999875431 111111   2468999887765    666777777789999999765433221          


Q ss_pred             CCchhhhhccCchhhhHHHHHHHHHHHHHH---hcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccC
Q 023689          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (278)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (278)
                                ...|+.||.+...+.+.++.   .+++++++++||.+.++.....            ..        ...
T Consensus       156 ----------~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~------------~~--------~~~  205 (253)
T PRK07904        156 ----------NFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHA------------KE--------APL  205 (253)
T ss_pred             ----------CcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccC------------CC--------CCC
Confidence                      14699999988866555543   4699999999999998743211            00        012


Q ss_pred             cccHHHHHHHHHhhhcCCC
Q 023689          228 AVPVKDVAKAQVLLFESPA  246 (278)
Q Consensus       228 ~i~~~D~a~~~~~~~~~~~  246 (278)
                      .+.++|+|+.++..+.++.
T Consensus       206 ~~~~~~~A~~i~~~~~~~~  224 (253)
T PRK07904        206 TVDKEDVAKLAVTAVAKGK  224 (253)
T ss_pred             CCCHHHHHHHHHHHHHcCC
Confidence            4789999999999998653

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.89  E-value=1.1e-21  Score=159.02  Aligned_cols=205  Identities=21%  Similarity=0.237  Sum_probs=146.5

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCC-Cccc-ccCCCCCCCceEEEEccCCChhhHHHHhc-------C
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHL-FALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~-~~~~-~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~   80 (278)
                      |++|||||+|+||++++++|.++|+ .|++..|+... .... ..... ...++.++.+|++|.+++.++++       +
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~   80 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGY-RVIATYFSGNDCAKDWFEEYGF-TEDQVRLKELDVTDTEECAEALAEIEEEEGP   80 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCcHHHHHHHHHHhhc-cCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            6899999999999999999999998 88888887531 1111 11111 12268899999999998888765       4


Q ss_pred             ccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHH----HHhcCCCEEEEecceeeeecCCCCCCccccCCCCC
Q 023689           81 CKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEA----AKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (278)
Q Consensus        81 ~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~----~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~  152 (278)
                      +|++||+||....    +...+.++..+++|+.++.++.++    +++.+.++||++||..+..+.++.           
T Consensus        81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~-----------  149 (245)
T PRK12824         81 VDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFGQ-----------  149 (245)
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCCC-----------
Confidence            7999999986543    223356678899999998887554    455667899999997665443321           


Q ss_pred             chhhhhccCchhhhHHHHHHHHHHHHHH---hcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcc
Q 023689          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (278)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  229 (278)
                               ..|+.+|.+.+.+.+.++.   +.++++++++|+.+.++......   ...........+      ...+.
T Consensus       150 ---------~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~---~~~~~~~~~~~~------~~~~~  211 (245)
T PRK12824        150 ---------TNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQMG---PEVLQSIVNQIP------MKRLG  211 (245)
T ss_pred             ---------hHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcC---HHHHHHHHhcCC------CCCCC
Confidence                     4699999988888777765   34899999999999988644321   122222222222      34466


Q ss_pred             cHHHHHHHHHhhhcCC
Q 023689          230 PVKDVAKAQVLLFESP  245 (278)
Q Consensus       230 ~~~D~a~~~~~~~~~~  245 (278)
                      .++|+++++..++...
T Consensus       212 ~~~~va~~~~~l~~~~  227 (245)
T PRK12824        212 TPEEIAAAVAFLVSEA  227 (245)
T ss_pred             CHHHHHHHHHHHcCcc
Confidence            8899999998887543

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.89  E-value=3.8e-22  Score=162.14  Aligned_cols=215  Identities=20%  Similarity=0.154  Sum_probs=145.4

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEe-cCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc-------
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATV-FPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~-r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------   79 (278)
                      ||++|||||+|+||+.+++.|+++|+ .|++.. |+.+..+... .+.... .++.++++|++|.+++.++++       
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGW-SVGINYARDAAAAEETADAVRAAG-GRACVVAGDVANEADVIAMFDAVQSAFG   79 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcC-CcEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence            47999999999999999999999999 666554 4433222211 111111 278899999999988877664       


Q ss_pred             CccEEEEecccCCCC-----CCCCchhhhhhhHHhHHHHHHHHHHhc----C---CCEEEEecceeeeecCCCCCCcccc
Q 023689           80 GCKGVFHVASPCTLE-----DPVDPEKELILPAVQGTLNVLEAAKRF----G---VRRVVVTSSISAIVPNPGWKGKVFD  147 (278)
Q Consensus        80 ~~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~ll~~~~~~----~---~~~~v~~Ss~~~~~~~~~~~~~~~~  147 (278)
                      ++|++||+||.....     ...+++...+++|+.++..+++++.+.    +   -++||++||..+.++.+..      
T Consensus        80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~------  153 (248)
T PRK06947         80 RLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNE------  153 (248)
T ss_pred             CCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCCC------
Confidence            589999999865321     122345677999999998887654322    1   2469999997776553321      


Q ss_pred             CCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccc
Q 023689          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (278)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (278)
                                   ...|+.+|...+.+.+.++++.   |++++++|||.+.++..... .. ...........+      
T Consensus       154 -------------~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~-~~-~~~~~~~~~~~~------  212 (248)
T PRK06947        154 -------------YVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASG-GQ-PGRAARLGAQTP------  212 (248)
T ss_pred             -------------CcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCccccccccc-CC-HHHHHHHhhcCC------
Confidence                         1369999999998888887654   89999999999999864321 01 111111111111      


Q ss_pred             ccCcccHHHHHHHHHhhhcCCC--CCceEE
Q 023689          225 WLGAVPVKDVAKAQVLLFESPA--ASGRYL  252 (278)
Q Consensus       225 ~~~~i~~~D~a~~~~~~~~~~~--~~~~~~  252 (278)
                      ......++|+|+.+++++.++.  ..|.++
T Consensus       213 ~~~~~~~e~va~~~~~l~~~~~~~~~G~~~  242 (248)
T PRK06947        213 LGRAGEADEVAETIVWLLSDAASYVTGALL  242 (248)
T ss_pred             CCCCcCHHHHHHHHHHHcCccccCcCCceE
Confidence            1224688999999999987654  245543

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.89  E-value=7.1e-22  Score=159.69  Aligned_cols=203  Identities=14%  Similarity=0.060  Sum_probs=144.1

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCCCCCCceEEEEccCCC--hhhHHHHh--
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLD--SGAVSRAV--   78 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~~~~Dl~d--~~~~~~~~--   78 (278)
                      |..+++|+++||||+|+||++++++|+++|+ .|+++.|+.+..+.... +.......+.++.+|+.+  .+++.+++  
T Consensus         1 ~~~l~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   79 (239)
T PRK08703          1 MATLSDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAAT   79 (239)
T ss_pred             CCCCCCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHH
Confidence            5556778999999999999999999999999 89999987754332211 111111156788899976  33444433  


Q ss_pred             ------cCccEEEEecccCCC-----CCCCCchhhhhhhHHhHHHHHHHHHHh----cCCCEEEEecceeeeecCCCCCC
Q 023689           79 ------EGCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKG  143 (278)
Q Consensus        79 ------~~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~  143 (278)
                            .++|+|||+||....     +...+++...+++|+.++.++++++.+    .+.++++++||..+..+.+.   
T Consensus        80 i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~---  156 (239)
T PRK08703         80 IAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAY---  156 (239)
T ss_pred             HHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCCCC---
Confidence                  457999999986432     122345567899999998888887743    34578999998665433222   


Q ss_pred             ccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc----CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCC
Q 023689          144 KVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH----GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKD  219 (278)
Q Consensus       144 ~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~----~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~  219 (278)
                                       ...|+.+|.+.+.+.+.++.+.    ++++++++||.|.++......           .+.  
T Consensus       157 -----------------~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~-----------~~~--  206 (239)
T PRK08703        157 -----------------WGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSH-----------PGE--  206 (239)
T ss_pred             -----------------ccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccccC-----------CCC--
Confidence                             1469999999999998888764    599999999999998643210           011  


Q ss_pred             cccccccCcccHHHHHHHHHhhhcC
Q 023689          220 TQEYHWLGAVPVKDVAKAQVLLFES  244 (278)
Q Consensus       220 ~~~~~~~~~i~~~D~a~~~~~~~~~  244 (278)
                          ....+...+|++.++.+++..
T Consensus       207 ----~~~~~~~~~~~~~~~~~~~~~  227 (239)
T PRK08703        207 ----AKSERKSYGDVLPAFVWWASA  227 (239)
T ss_pred             ----CccccCCHHHHHHHHHHHhCc
Confidence                112356899999999999873

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.89  E-value=1.1e-21  Score=160.24  Aligned_cols=221  Identities=14%  Similarity=0.079  Sum_probs=149.3

Q ss_pred             ccCCceEEEeCcch--hhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc----
Q 023689            6 EKEEETVCVTGANG--FIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG--~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~----   79 (278)
                      .+++|++|||||++  +||+++++.|.++|+ .|++..|+....+....+..... .+.++.+|++|+++++++++    
T Consensus         3 ~l~~k~~lITGas~~~GIG~aia~~la~~G~-~vil~~r~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~   80 (262)
T PRK07984          3 FLSGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLG-SDIVLPCDVAEDASIDAMFAELGK   80 (262)
T ss_pred             ccCCCEEEEeCCCCCccHHHHHHHHHHHCCC-EEEEEecchhHHHHHHHHHhccC-CceEeecCCCCHHHHHHHHHHHHh
Confidence            35678999999985  999999999999999 77777775321222222222111 56788999999999888774    


Q ss_pred             ---CccEEEEecccCCCC---------CCCCchhhhhhhHHhHHHHHHHHHHhc--CCCEEEEecceeeeecCCCCCCcc
Q 023689           80 ---GCKGVFHVASPCTLE---------DPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKV  145 (278)
Q Consensus        80 ---~~d~vi~~a~~~~~~---------~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~  145 (278)
                         ++|++|||||.....         ...+.++..+++|+.+...+.+++...  .-+++|++||.++..+.++.    
T Consensus        81 ~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~~~~~~----  156 (262)
T PRK07984         81 VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNY----  156 (262)
T ss_pred             hcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCCCCCCc----
Confidence               479999999864321         122355678899999888888776432  22689999986654332221    


Q ss_pred             ccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccc
Q 023689          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQE  222 (278)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (278)
                                      ..|+.+|...+.+.+.++.+   +|++++++.||.+.++....... ............|    
T Consensus       157 ----------------~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~-~~~~~~~~~~~~p----  215 (262)
T PRK07984        157 ----------------NVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKD-FRKMLAHCEAVTP----  215 (262)
T ss_pred             ----------------chhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCc-hHHHHHHHHHcCC----
Confidence                            46999999999998888864   48999999999998864221101 1111122211112    


Q ss_pred             ccccCcccHHHHHHHHHhhhcCCC--CCceEEecC
Q 023689          223 YHWLGAVPVKDVAKAQVLLFESPA--ASGRYLCTN  255 (278)
Q Consensus       223 ~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~  255 (278)
                        ...+..++|+|+++++++....  ..|..+..+
T Consensus       216 --~~r~~~pedva~~~~~L~s~~~~~itG~~i~vd  248 (262)
T PRK07984        216 --IRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVD  248 (262)
T ss_pred             --CcCCCCHHHHHHHHHHHcCcccccccCcEEEEC
Confidence              2346789999999999987533  345554333

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.89  E-value=9.1e-22  Score=161.74  Aligned_cols=220  Identities=14%  Similarity=0.092  Sum_probs=148.3

Q ss_pred             cCCceEEEeCcch--hhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            7 KEEETVCVTGANG--FIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         7 ~~~~~vlItGatG--~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      +++|++|||||++  +||++++++|.++|+ .|++..|+....+.+..+..... ....+++|++|+++++++++     
T Consensus         5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~g-~~~~~~~Dv~d~~~v~~~~~~~~~~   82 (271)
T PRK06505          5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGA-ELAFTYQGEALGKRVKPLAESLG-SDFVLPCDVEDIASVDAVFEALEKK   82 (271)
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHhCCC-EEEEecCchHHHHHHHHHHHhcC-CceEEeCCCCCHHHHHHHHHHHHHH
Confidence            4578999999997  999999999999999 78777775432222222211111 23578899999998888765     


Q ss_pred             --CccEEEEecccCCC--------CCCCCchhhhhhhHHhHHHHHHHHHHhc--CCCEEEEecceeeeecCCCCCCcccc
Q 023689           80 --GCKGVFHVASPCTL--------EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFD  147 (278)
Q Consensus        80 --~~d~vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~  147 (278)
                        ++|++|||||....        +...++|+..+++|+.++.++++++...  .-+++|++||.++..+.+..      
T Consensus        83 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~~~~~------  156 (271)
T PRK06505         83 WGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRVMPNY------  156 (271)
T ss_pred             hCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccccCCcc------
Confidence              57999999996431        2234567888999999998888766432  22689999997665433321      


Q ss_pred             CCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccc
Q 023689          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (278)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (278)
                                    ..|+.+|...+.+.+.++.+   +|+++++|.||.+.++....... ............|      
T Consensus       157 --------------~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~-~~~~~~~~~~~~p------  215 (271)
T PRK06505        157 --------------NVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGD-ARAIFSYQQRNSP------  215 (271)
T ss_pred             --------------chhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcc-hHHHHHHHhhcCC------
Confidence                          46888888888777777764   58999999999998875322111 1111111111112      


Q ss_pred             ccCcccHHHHHHHHHhhhcCCC--CCceEEecC
Q 023689          225 WLGAVPVKDVAKAQVLLFESPA--ASGRYLCTN  255 (278)
Q Consensus       225 ~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~  255 (278)
                      ...+..++|+|+++++++....  ..|..+..+
T Consensus       216 ~~r~~~peeva~~~~fL~s~~~~~itG~~i~vd  248 (271)
T PRK06505        216 LRRTVTIDEVGGSALYLLSDLSSGVTGEIHFVD  248 (271)
T ss_pred             ccccCCHHHHHHHHHHHhCccccccCceEEeec
Confidence            2345689999999999986533  246544333

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.89  E-value=5.6e-22  Score=160.17  Aligned_cols=214  Identities=21%  Similarity=0.158  Sum_probs=150.6

Q ss_pred             EEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCC-CCccc-ccCCCCCCCceEEEEccCCChhhHHHHhc-------Ccc
Q 023689           12 VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS-DSSHL-FALPGAGDANLRVFEADVLDSGAVSRAVE-------GCK   82 (278)
Q Consensus        12 vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~-~~~~~-~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d   82 (278)
                      +||||++|+||++++++|+++|+ .|+++.|+.. ..... ..+.... .+++++.+|++|+++++++++       .+|
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   78 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGA-KVIITYRSSEEGAEEVVEELKAYG-VKALGVVCDVSDREDVKAVVEEIEEELGPID   78 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHHHHHHhcC-CceEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            58999999999999999999999 8888887652 11111 1111111 268899999999998888765       469


Q ss_pred             EEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHHHh----cCCCEEEEecceeeeecCCCCCCccccCCCCCch
Q 023689           83 GVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDL  154 (278)
Q Consensus        83 ~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~  154 (278)
                      +|||+||....    +...+.++..+++|+.++.++++++.+    .+.++|+++||.+++++.+..             
T Consensus        79 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~~-------------  145 (239)
T TIGR01830        79 ILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAGQ-------------  145 (239)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCC-------------
Confidence            99999997542    122345678899999999999998865    356789999997777654432             


Q ss_pred             hhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccH
Q 023689          155 EYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPV  231 (278)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  231 (278)
                             ..|+.+|.+.+.+.+.++++   .|+++++++|+.+.++.....   ............+      ...+.++
T Consensus       146 -------~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~---~~~~~~~~~~~~~------~~~~~~~  209 (239)
T TIGR01830       146 -------ANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDKL---SEKVKKKILSQIP------LGRFGTP  209 (239)
T ss_pred             -------chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhhc---ChHHHHHHHhcCC------cCCCcCH
Confidence                   56999999998888777654   499999999998877643222   1111222222222      2346789


Q ss_pred             HHHHHHHHhhhcCCC--CCc-eEEecCc
Q 023689          232 KDVAKAQVLLFESPA--ASG-RYLCTNG  256 (278)
Q Consensus       232 ~D~a~~~~~~~~~~~--~~~-~~~~~~~  256 (278)
                      +|+|++++.++....  ..| .|++.++
T Consensus       210 ~~~a~~~~~~~~~~~~~~~g~~~~~~~g  237 (239)
T TIGR01830       210 EEVANAVAFLASDEASYITGQVIHVDGG  237 (239)
T ss_pred             HHHHHHHHHHhCcccCCcCCCEEEeCCC
Confidence            999999988885432  234 4555543

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.89  E-value=1.3e-21  Score=159.84  Aligned_cols=213  Identities=18%  Similarity=0.139  Sum_probs=147.1

Q ss_pred             ccCCceEEEeCcch--hhHHHHHHHHHHCCCCeEEEEecCCCC-----------Cccc-ccCCCCCCCceEEEEccCCCh
Q 023689            6 EKEEETVCVTGANG--FIGTWLVKTLLDNNYTSINATVFPGSD-----------SSHL-FALPGAGDANLRVFEADVLDS   71 (278)
Q Consensus         6 ~~~~~~vlItGatG--~iG~~l~~~L~~~g~~~v~~~~r~~~~-----------~~~~-~~~~~~~~~~v~~~~~Dl~d~   71 (278)
                      .+++|++|||||||  +||.+++++|.++|+ .|++..|++..           ...+ ..+.... .+++++.+|++|.
T Consensus         2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~   79 (256)
T PRK12748          2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGI-DIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYG-VRCEHMEIDLSQP   79 (256)
T ss_pred             CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCC-cEEEEcCCccccccccccchhhHHHHHHHHHhcC-CeEEEEECCCCCH
Confidence            34678999999995  799999999999999 88888876211           0001 1111111 2689999999999


Q ss_pred             hhHHHHhc-------CccEEEEecccCCCCC----CCCchhhhhhhHHhHHHHHHHHHHhc----CCCEEEEecceeeee
Q 023689           72 GAVSRAVE-------GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKRF----GVRRVVVTSSISAIV  136 (278)
Q Consensus        72 ~~~~~~~~-------~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~~----~~~~~v~~Ss~~~~~  136 (278)
                      +++.++++       ++|+|||+||......    ..+.++..+++|+.++..+++++.+.    +.+++|++||..++.
T Consensus        80 ~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~  159 (256)
T PRK12748         80 YAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLG  159 (256)
T ss_pred             HHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccC
Confidence            98877665       4799999998754321    22346778999999999999987543    456899999876644


Q ss_pred             cCCCCCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHH
Q 023689          137 PNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQL  213 (278)
Q Consensus       137 ~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~  213 (278)
                      +.++.                    ..|+.+|.+.+.+++.++.+   .+++++.++||.+.++.....      .....
T Consensus       160 ~~~~~--------------------~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~~------~~~~~  213 (256)
T PRK12748        160 PMPDE--------------------LAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITEE------LKHHL  213 (256)
T ss_pred             CCCCc--------------------hHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCChh------HHHhh
Confidence            33221                    46999999999998887765   489999999998887643211      11111


Q ss_pred             hhCCCCcccccccCcccHHHHHHHHHhhhcCCC--CCceEE
Q 023689          214 LQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYL  252 (278)
Q Consensus       214 ~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~  252 (278)
                      ....+      ...+..++|+|+++.+++....  ..|.++
T Consensus       214 ~~~~~------~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~  248 (256)
T PRK12748        214 VPKFP------QGRVGEPVDAARLIAFLVSEEAKWITGQVI  248 (256)
T ss_pred             hccCC------CCCCcCHHHHHHHHHHHhCcccccccCCEE
Confidence            11111      1234568999999988876533  235443

>TIGR02415 23BDH acetoin reductases

Probab=99.89  E-value=5.5e-22  Score=161.78  Aligned_cols=217  Identities=18%  Similarity=0.208  Sum_probs=150.6

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc-------Cc
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~   81 (278)
                      |+++||||+|+||.+++++|++.|+ .|+++.|+.+...... .+.... .++.++.+|++|++++.++++       .+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i   78 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGF-AVAVADLNEETAKETAKEINQAG-GKAVAYKLDVSDKDQVFSAIDQAAEKFGGF   78 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            5899999999999999999999999 8888888654322221 111111 268899999999999888764       46


Q ss_pred             cEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHHH----hcC-CCEEEEecceeeeecCCCCCCccccCCCCC
Q 023689           82 KGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAK----RFG-VRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (278)
Q Consensus        82 d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~  152 (278)
                      |+|||+|+....    +...++++..+++|+.++..+++++.    +.+ .+++|++||..+.++.+..           
T Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-----------  147 (254)
T TIGR02415        79 DVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPIL-----------  147 (254)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCCC-----------
Confidence            999999987443    22234567889999999887766653    333 3689999997776654432           


Q ss_pred             chhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCch--------hHHHHHHHhhCCCCcc
Q 023689          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNA--------SCAVLQQLLQGSKDTQ  221 (278)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~~--------~~~~~~~~~~~~~~~~  221 (278)
                               +.|+.+|.+.+.+++.++.+.   ++++++++||.+.++........        ............    
T Consensus       148 ---------~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  214 (254)
T TIGR02415       148 ---------SAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEI----  214 (254)
T ss_pred             ---------cchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhC----
Confidence                     579999999999988877653   89999999999977753211000        000011111111    


Q ss_pred             cccccCcccHHHHHHHHHhhhcCCCC--CceEEec
Q 023689          222 EYHWLGAVPVKDVAKAQVLLFESPAA--SGRYLCT  254 (278)
Q Consensus       222 ~~~~~~~i~~~D~a~~~~~~~~~~~~--~~~~~~~  254 (278)
                        ....+.+++|+++++.+++.+...  .|.++..
T Consensus       215 --~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~  247 (254)
T TIGR02415       215 --ALGRPSEPEDVAGLVSFLASEDSDYITGQSILV  247 (254)
T ss_pred             --CCCCCCCHHHHHHHHHhhcccccCCccCcEEEe
Confidence              123478999999999999987543  3555443

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.89  E-value=1.1e-21  Score=159.77  Aligned_cols=217  Identities=16%  Similarity=0.151  Sum_probs=151.1

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc------
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~------   79 (278)
                      ++++++|||||+|+||+.+++.|.++|+ .|++..|+.+..+... .+.... .++.++++|++|++++.++++      
T Consensus         3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (253)
T PRK08217          3 LKDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEAVAECGALG-TEVRGYAANVTDEEDVEATFAQIAEDF   80 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            5678999999999999999999999999 8888888764322221 111111 268889999999988877665      


Q ss_pred             -CccEEEEecccCCCC-------------CCCCchhhhhhhHHhHHHHHHHHH----Hhc-CCCEEEEecceeeeecCCC
Q 023689           80 -GCKGVFHVASPCTLE-------------DPVDPEKELILPAVQGTLNVLEAA----KRF-GVRRVVVTSSISAIVPNPG  140 (278)
Q Consensus        80 -~~d~vi~~a~~~~~~-------------~~~~~~~~~~~~n~~~~~~ll~~~----~~~-~~~~~v~~Ss~~~~~~~~~  140 (278)
                       .+|+|||+||.....             ...+.+...+++|+.++..+.+++    .+. .-++++++||.. .++.+.
T Consensus        81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~-~~~~~~  159 (253)
T PRK08217         81 GQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIA-RAGNMG  159 (253)
T ss_pred             CCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEcccc-ccCCCC
Confidence             469999999864321             112345677889999998776654    232 235688888754 333222


Q ss_pred             CCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCC
Q 023689          141 WKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGS  217 (278)
Q Consensus       141 ~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~  217 (278)
                                          ...|+.+|.+.+.+++.++.+   .++++++++|+.+.++.....   ............
T Consensus       160 --------------------~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~---~~~~~~~~~~~~  216 (253)
T PRK08217        160 --------------------QTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAM---KPEALERLEKMI  216 (253)
T ss_pred             --------------------CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcccccc---CHHHHHHHHhcC
Confidence                                157999999999998888864   589999999999998865332   122333333333


Q ss_pred             CCcccccccCcccHHHHHHHHHhhhcCCCCCc-eEEecC
Q 023689          218 KDTQEYHWLGAVPVKDVAKAQVLLFESPAASG-RYLCTN  255 (278)
Q Consensus       218 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~-~~~~~~  255 (278)
                      +      ...+.+++|+|+++..++......| .+.+.+
T Consensus       217 ~------~~~~~~~~~~a~~~~~l~~~~~~~g~~~~~~g  249 (253)
T PRK08217        217 P------VGRLGEPEEIAHTVRFIIENDYVTGRVLEIDG  249 (253)
T ss_pred             C------cCCCcCHHHHHHHHHHHHcCCCcCCcEEEeCC
Confidence            2      3456799999999999987654455 344443

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.89  E-value=1e-21  Score=160.41  Aligned_cols=222  Identities=14%  Similarity=0.118  Sum_probs=150.3

Q ss_pred             cccCCceEEEeCcc--hhhHHHHHHHHHHCCCCeEEEEecCCCC---CcccccCCCCCCCceEEEEccCCChhhHHHHhc
Q 023689            5 AEKEEETVCVTGAN--GFIGTWLVKTLLDNNYTSINATVFPGSD---SSHLFALPGAGDANLRVFEADVLDSGAVSRAVE   79 (278)
Q Consensus         5 ~~~~~~~vlItGat--G~iG~~l~~~L~~~g~~~v~~~~r~~~~---~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~   79 (278)
                      .++++|++|||||+  ++||++++++|.++|+ .|++..|+.+.   .+.+.++..... .+.++++|++|++++.++++
T Consensus         2 ~~l~~k~~lItGas~~~GIG~aia~~la~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~d~~~v~~~~~   79 (258)
T PRK07370          2 LDLTGKKALVTGIANNRSIAWGIAQQLHAAGA-ELGITYLPDEKGRFEKKVRELTEPLN-PSLFLPCDVQDDAQIEETFE   79 (258)
T ss_pred             cccCCcEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEEecCcccchHHHHHHHHHhccC-cceEeecCcCCHHHHHHHHH
Confidence            34667999999986  8999999999999999 77666554321   111222211111 56788999999999888765


Q ss_pred             -------CccEEEEecccCCC--------CCCCCchhhhhhhHHhHHHHHHHHHHhc--CCCEEEEecceeeeecCCCCC
Q 023689           80 -------GCKGVFHVASPCTL--------EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWK  142 (278)
Q Consensus        80 -------~~d~vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~Ss~~~~~~~~~~~  142 (278)
                             ++|++|||||....        +...++++..+++|+.++..+.+++...  .-+++|++||..+..+.+.  
T Consensus        80 ~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~--  157 (258)
T PRK07370         80 TIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVRAIPN--  157 (258)
T ss_pred             HHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccccccCCcc--
Confidence                   57999999996431        1233567889999999998888876432  1268999998766433322  


Q ss_pred             CccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCC
Q 023689          143 GKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKD  219 (278)
Q Consensus       143 ~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~  219 (278)
                                        ...|+.+|.+.+.+.+.++.+   +|++++++.||.+.++....... ............| 
T Consensus       158 ------------------~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~-~~~~~~~~~~~~p-  217 (258)
T PRK07370        158 ------------------YNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGG-ILDMIHHVEEKAP-  217 (258)
T ss_pred             ------------------cchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhcccc-chhhhhhhhhcCC-
Confidence                              156999999999888888865   48999999999998875321110 1111112111112 


Q ss_pred             cccccccCcccHHHHHHHHHhhhcCCC--CCceEEecC
Q 023689          220 TQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLCTN  255 (278)
Q Consensus       220 ~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~  255 (278)
                           ...+..++|++.++.+++....  ..|..+..+
T Consensus       218 -----~~r~~~~~dva~~~~fl~s~~~~~~tG~~i~vd  250 (258)
T PRK07370        218 -----LRRTVTQTEVGNTAAFLLSDLASGITGQTIYVD  250 (258)
T ss_pred             -----cCcCCCHHHHHHHHHHHhChhhccccCcEEEEC
Confidence                 2356788999999999986533  245443333

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.89  E-value=1.3e-21  Score=160.24  Aligned_cols=225  Identities=15%  Similarity=0.106  Sum_probs=150.5

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCC-Cccc-ccCCCCCCCceEEEEccCCChhhHHHHhc----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHL-FALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~-~~~~-~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~----   79 (278)
                      .+++|++|||||+|+||++++++|.++|+ .|++..|+... .... ..+..... ++.++.+|++|.+++.++++    
T Consensus         4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~-~vvi~~~~~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~i~~~~~~~~~   81 (261)
T PRK08936          4 DLEGKVVVITGGSTGLGRAMAVRFGKEKA-KVVINYRSDEEEANDVAEEIKKAGG-EAIAVKGDVTVESDVVNLIQTAVK   81 (261)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHHcCC-eEEEEEecCCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999 77776664322 1111 11111122 67899999999998887765    


Q ss_pred             ---CccEEEEecccCCCCC----CCCchhhhhhhHHhHHHHHH----HHHHhcC-CCEEEEecceeeeecCCCCCCcccc
Q 023689           80 ---GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVL----EAAKRFG-VRRVVVTSSISAIVPNPGWKGKVFD  147 (278)
Q Consensus        80 ---~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll----~~~~~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~  147 (278)
                         ++|++||+|+......    ..+.++..+++|+.++..++    +.+++.+ .+++|++||..+..+.+.       
T Consensus        82 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~-------  154 (261)
T PRK08936         82 EFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPL-------  154 (261)
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCC-------
Confidence               4799999998754321    22456778999987776544    4455554 468999998655433222       


Q ss_pred             CCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccc
Q 023689          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (278)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (278)
                                   ...|+.+|.+.+.+.+.++.+   .|+++++++||.+.++........ ...........+      
T Consensus       155 -------------~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~-~~~~~~~~~~~~------  214 (261)
T PRK08936        155 -------------FVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFAD-PKQRADVESMIP------  214 (261)
T ss_pred             -------------CcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCC-HHHHHHHHhcCC------
Confidence                         157999998888777776654   489999999999999864322111 111122222222      


Q ss_pred             ccCcccHHHHHHHHHhhhcCCC--CCceEEecCcccc
Q 023689          225 WLGAVPVKDVAKAQVLLFESPA--ASGRYLCTNGIYQ  259 (278)
Q Consensus       225 ~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~~~~s  259 (278)
                      ...+..++|+++.+.+++....  ..|.++..+....
T Consensus       215 ~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~d~g~~  251 (261)
T PRK08936        215 MGYIGKPEEIAAVAAWLASSEASYVTGITLFADGGMT  251 (261)
T ss_pred             CCCCcCHHHHHHHHHHHcCcccCCccCcEEEECCCcc
Confidence            2356788999999999887543  2455544444333

>PRK06484 short chain dehydrogenase; Validated

Probab=99.89  E-value=7.9e-22  Score=176.80  Aligned_cols=220  Identities=18%  Similarity=0.164  Sum_probs=157.5

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc-------
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------   79 (278)
                      ..+|++|||||+|+||++++++|.++|+ .|++..|+.+..+.+....  . .++..+.+|++|++++.++++       
T Consensus       267 ~~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~--~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g  342 (520)
T PRK06484        267 ESPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLAEAL--G-DEHLSVQADITDEAAVESAFAQIQARWG  342 (520)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh--C-CceeEEEccCCCHHHHHHHHHHHHHHcC
Confidence            3578999999999999999999999999 8888888765443332211  1 167788999999998888775       


Q ss_pred             CccEEEEecccCCC-----CCCCCchhhhhhhHHhHHHHHHHHHHhc--CCCEEEEecceeeeecCCCCCCccccCCCCC
Q 023689           80 GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (278)
Q Consensus        80 ~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~  152 (278)
                      .+|++|||||....     +...+.++..+++|+.++.++++++...  +.++||++||.++..+.++.           
T Consensus       343 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----------  411 (520)
T PRK06484        343 RLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLALPPR-----------  411 (520)
T ss_pred             CCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCCCCC-----------
Confidence            47999999997532     2223467888999999999999887653  34689999998776554332           


Q ss_pred             chhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcc
Q 023689          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (278)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  229 (278)
                               ..|+.+|...+.+.+.++.+.   |+++++++||.|.++....................+      ...+.
T Consensus       412 ---------~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~  476 (520)
T PRK06484        412 ---------NAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIP------LGRLG  476 (520)
T ss_pred             ---------chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCC------CCCCc
Confidence                     579999999999988887653   899999999999988543211111111222222222      23457


Q ss_pred             cHHHHHHHHHhhhcCCC--CCceE-EecCc
Q 023689          230 PVKDVAKAQVLLFESPA--ASGRY-LCTNG  256 (278)
Q Consensus       230 ~~~D~a~~~~~~~~~~~--~~~~~-~~~~~  256 (278)
                      .++|+|+++++++....  ..|.. .+.++
T Consensus       477 ~~~dia~~~~~l~s~~~~~~~G~~i~vdgg  506 (520)
T PRK06484        477 DPEEVAEAIAFLASPAASYVNGATLTVDGG  506 (520)
T ss_pred             CHHHHHHHHHHHhCccccCccCcEEEECCC
Confidence            89999999999986532  34544 44433

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.89  E-value=6.6e-22  Score=161.03  Aligned_cols=215  Identities=17%  Similarity=0.118  Sum_probs=143.7

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCc-------
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGC-------   81 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~-------   81 (278)
                      ||++|||||+|+||++++++|.++|+ +|+++.|++.+  .+..+......+++++.+|++|++++.++++.+       
T Consensus         1 ~k~vlItGasggiG~~ia~~l~~~g~-~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   77 (251)
T PRK06924          1 MRYVIITGTSQGLGEAIANQLLEKGT-HVISISRTENK--ELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQED   77 (251)
T ss_pred             CcEEEEecCCchHHHHHHHHHHhcCC-EEEEEeCCchH--HHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCcc
Confidence            57999999999999999999999999 88888886521  111111111127889999999999988877532       


Q ss_pred             ----cEEEEecccCCC-----CCCCCchhhhhhhHHhHHHHHHHHH----Hhc-CCCEEEEecceeeeecCCCCCCcccc
Q 023689           82 ----KGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAA----KRF-GVRRVVVTSSISAIVPNPGWKGKVFD  147 (278)
Q Consensus        82 ----d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~-~~~~~v~~Ss~~~~~~~~~~~~~~~~  147 (278)
                          +++||+||....     +...+.+...+++|+.+...+++++    ++. +.++||++||..+..+.+.       
T Consensus        78 ~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-------  150 (251)
T PRK06924         78 NVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFG-------  150 (251)
T ss_pred             cCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCCC-------
Confidence                278999986432     2233456778889988866555544    443 3468999998665433221       


Q ss_pred             CCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh-----cCCceEEEecceeeCCCCCCC---CchhHHHHHHHhhCCCC
Q 023689          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK-----HGVDVVAIHPATCLGPLMQPY---LNASCAVLQQLLQGSKD  219 (278)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-----~~~~~~~lrp~~i~g~~~~~~---~~~~~~~~~~~~~~~~~  219 (278)
                                   ...|+.+|.+.+.+.+.++.+     .+++++.++||.+-++.....   ...............+ 
T Consensus       151 -------------~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-  216 (251)
T PRK06924        151 -------------WSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLKE-  216 (251)
T ss_pred             -------------cHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHhh-
Confidence                         257999999999999888754     479999999998877642110   0000000111111101 


Q ss_pred             cccccccCcccHHHHHHHHHhhhcC-CCCCceEE
Q 023689          220 TQEYHWLGAVPVKDVAKAQVLLFES-PAASGRYL  252 (278)
Q Consensus       220 ~~~~~~~~~i~~~D~a~~~~~~~~~-~~~~~~~~  252 (278)
                           ...+..++|+|+.++.++.. ....|.++
T Consensus       217 -----~~~~~~~~dva~~~~~l~~~~~~~~G~~~  245 (251)
T PRK06924        217 -----EGKLLSPEYVAKALRNLLETEDFPNGEVI  245 (251)
T ss_pred             -----cCCcCCHHHHHHHHHHHHhcccCCCCCEe
Confidence                 12368999999999999886 33445543

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.89  E-value=8.5e-22  Score=162.06  Aligned_cols=219  Identities=13%  Similarity=0.093  Sum_probs=146.5

Q ss_pred             ccCCceEEEeCcc--hhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc----
Q 023689            6 EKEEETVCVTGAN--GFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (278)
Q Consensus         6 ~~~~~~vlItGat--G~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~----   79 (278)
                      .+++|++|||||+  ++||++++++|.++|+ .|++..|+....+.+..+....... .++++|++|++++.++++    
T Consensus         2 ~l~~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~   79 (274)
T PRK08415          2 IMKGKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNEALKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLKK   79 (274)
T ss_pred             ccCCcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHHH
Confidence            3457999999997  7999999999999999 7887777642212222211111113 578999999998888765    


Q ss_pred             ---CccEEEEecccCCC--------CCCCCchhhhhhhHHhHHHHHHHHHHhc--CCCEEEEecceeeeecCCCCCCccc
Q 023689           80 ---GCKGVFHVASPCTL--------EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVF  146 (278)
Q Consensus        80 ---~~d~vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~  146 (278)
                         ++|++|||||....        +...+.++..+++|+.++..+.+++...  .-+++|++||.++..+.+..     
T Consensus        80 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~~~~~-----  154 (274)
T PRK08415         80 DLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVKYVPHY-----  154 (274)
T ss_pred             HcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCccCCCcc-----
Confidence               57999999996431        2233567889999999988888876442  22589999987654433221     


Q ss_pred             cCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHh-hCCCCccc
Q 023689          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLL-QGSKDTQE  222 (278)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~-~~~~~~~~  222 (278)
                                     ..|+.+|.+.+.+.+.++.+   +|++++++.||.|.++........ .. ..... ...|    
T Consensus       155 ---------------~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~-~~-~~~~~~~~~p----  213 (274)
T PRK08415        155 ---------------NVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDF-RM-ILKWNEINAP----  213 (274)
T ss_pred             ---------------hhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchh-hH-HhhhhhhhCc----
Confidence                           46888888888777777754   589999999999988642211000 00 00110 1111    


Q ss_pred             ccccCcccHHHHHHHHHhhhcCCC--CCceEEec
Q 023689          223 YHWLGAVPVKDVAKAQVLLFESPA--ASGRYLCT  254 (278)
Q Consensus       223 ~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~~  254 (278)
                        ...+..++|+|+++++++....  ..|..+..
T Consensus       214 --l~r~~~pedva~~v~fL~s~~~~~itG~~i~v  245 (274)
T PRK08415        214 --LKKNVSIEEVGNSGMYLLSDLSSGVTGEIHYV  245 (274)
T ss_pred             --hhccCCHHHHHHHHHHHhhhhhhcccccEEEE
Confidence              2346789999999999987532  34654433

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.89  E-value=1.7e-21  Score=159.30  Aligned_cols=213  Identities=13%  Similarity=0.072  Sum_probs=144.8

Q ss_pred             ccccCCceEEEeCc--chhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc--
Q 023689            4 EAEKEEETVCVTGA--NGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--   79 (278)
Q Consensus         4 m~~~~~~~vlItGa--tG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--   79 (278)
                      |..+++|++|||||  +++||++++++|.++|+ .|++..|.....+.+..+..... ....+++|++|+++++++++  
T Consensus         1 ~~~l~~k~vlItGas~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~   78 (260)
T PRK06997          1 MGFLAGKRILITGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFG-SDLVFPCDVASDEQIDALFASL   78 (260)
T ss_pred             CCccCCcEEEEeCCCCCCcHHHHHHHHHHHCCC-eEEEEccchHHHHHHHHHHHhcC-CcceeeccCCCHHHHHHHHHHH
Confidence            44566799999996  68999999999999999 77766543221222222111111 23468899999999888875  


Q ss_pred             -----CccEEEEecccCCCC---------CCCCchhhhhhhHHhHHHHHHHHHHhc--CCCEEEEecceeeeecCCCCCC
Q 023689           80 -----GCKGVFHVASPCTLE---------DPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKG  143 (278)
Q Consensus        80 -----~~d~vi~~a~~~~~~---------~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~  143 (278)
                           ++|++|||||.....         ...++++..+++|+.++..+.+++...  +.+++|++||..+..+.+..  
T Consensus        79 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~~~~~~--  156 (260)
T PRK06997         79 GQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERVVPNY--  156 (260)
T ss_pred             HHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccccCCCCc--
Confidence                 579999999875321         123467788999999998888877543  23689999987664433221  


Q ss_pred             ccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCc
Q 023689          144 KVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT  220 (278)
Q Consensus       144 ~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~  220 (278)
                                        ..|+.+|...+.+.+.++.+   +|++++++.||.+-++....... ............|  
T Consensus       157 ------------------~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~-~~~~~~~~~~~~p--  215 (260)
T PRK06997        157 ------------------NTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKD-FGKILDFVESNAP--  215 (260)
T ss_pred             ------------------chHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccc-hhhHHHHHHhcCc--
Confidence                              46899999998888888764   48999999999998864321111 1111111111112  


Q ss_pred             ccccccCcccHHHHHHHHHhhhcCC
Q 023689          221 QEYHWLGAVPVKDVAKAQVLLFESP  245 (278)
Q Consensus       221 ~~~~~~~~i~~~D~a~~~~~~~~~~  245 (278)
                          ...+..++|+|+++.+++...
T Consensus       216 ----~~r~~~pedva~~~~~l~s~~  236 (260)
T PRK06997        216 ----LRRNVTIEEVGNVAAFLLSDL  236 (260)
T ss_pred             ----ccccCCHHHHHHHHHHHhCcc
Confidence                234678999999999998753

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.89  E-value=2.4e-21  Score=158.79  Aligned_cols=216  Identities=19%  Similarity=0.183  Sum_probs=152.2

Q ss_pred             CCceEEEeCcch-hhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCC-CCCCceEEEEccCCChhhHHHHhc-----
Q 023689            8 EEETVCVTGANG-FIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPG-AGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         8 ~~~~vlItGatG-~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~-~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      ++|++|||||+| +||+++++.|.++|+ .|++..|+.+..+... .+.. .+..++.++++|+++++++.++++     
T Consensus        16 ~~k~vlItG~sg~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   94 (262)
T PRK07831         16 AGKVVLVTAAAGTGIGSATARRALEEGA-RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVER   94 (262)
T ss_pred             CCCEEEEECCCcccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            468999999997 799999999999999 7888887664432221 1111 111268899999999988887765     


Q ss_pred             --CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHHHh----cC-CCEEEEecceeeeecCCCCCCccccC
Q 023689           80 --GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKR----FG-VRRVVVTSSISAIVPNPGWKGKVFDE  148 (278)
Q Consensus        80 --~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~----~~-~~~~v~~Ss~~~~~~~~~~~~~~~~E  148 (278)
                        .+|+|||+||....    +...+.+...+++|+.++..+++++..    .+ .+++|++||..+..+.+.        
T Consensus        95 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~--------  166 (262)
T PRK07831         95 LGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHG--------  166 (262)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCC--------
Confidence              57999999996432    122345678889999999888877643    33 468999888665443222        


Q ss_pred             CCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccc
Q 023689          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (278)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (278)
                                  ...|+.+|.+.+.+.+.++.+   +|+++++++||.+.++......  ............+      .
T Consensus       167 ------------~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~--~~~~~~~~~~~~~------~  226 (262)
T PRK07831        167 ------------QAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVT--SAELLDELAAREA------F  226 (262)
T ss_pred             ------------CcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCccccccc--CHHHHHHHHhcCC------C
Confidence                        156999999999999998865   5899999999999998643221  1222233333222      2


Q ss_pred             cCcccHHHHHHHHHhhhcCCC--CCceEE
Q 023689          226 LGAVPVKDVAKAQVLLFESPA--ASGRYL  252 (278)
Q Consensus       226 ~~~i~~~D~a~~~~~~~~~~~--~~~~~~  252 (278)
                      ..+..++|+|+++++++....  ..|..+
T Consensus       227 ~r~~~p~~va~~~~~l~s~~~~~itG~~i  255 (262)
T PRK07831        227 GRAAEPWEVANVIAFLASDYSSYLTGEVV  255 (262)
T ss_pred             CCCcCHHHHHHHHHHHcCchhcCcCCceE
Confidence            346788999999999887543  245443

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.89  E-value=5.6e-21  Score=155.97  Aligned_cols=218  Identities=19%  Similarity=0.158  Sum_probs=148.7

Q ss_pred             ccccCCceEEEeCcch--hhHHHHHHHHHHCCCCeEEEEecCCC--------CCc---cc-ccCCCCCCCceEEEEccCC
Q 023689            4 EAEKEEETVCVTGANG--FIGTWLVKTLLDNNYTSINATVFPGS--------DSS---HL-FALPGAGDANLRVFEADVL   69 (278)
Q Consensus         4 m~~~~~~~vlItGatG--~iG~~l~~~L~~~g~~~v~~~~r~~~--------~~~---~~-~~~~~~~~~~v~~~~~Dl~   69 (278)
                      |..+++|++|||||+|  +||++++++|+++|+ .|++..|...        ..+   .. ..+...+ .++.++++|++
T Consensus         1 ~~~l~~k~vlVtGas~~~giG~~~a~~l~~~G~-~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~D~~   78 (256)
T PRK12859          1 MNQLKNKVAVVTGVSRLDGIGAAICKELAEAGA-DIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNG-VKVSSMELDLT   78 (256)
T ss_pred             CCCcCCcEEEEECCCCCCChHHHHHHHHHHCCC-eEEEEecccccccccccccHHHHHHHHHHHHhcC-CeEEEEEcCCC
Confidence            5567889999999995  899999999999999 7776643210        001   00 1111112 26889999999


Q ss_pred             ChhhHHHHhc-------CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceee
Q 023689           70 DSGAVSRAVE-------GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISA  134 (278)
Q Consensus        70 d~~~~~~~~~-------~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~  134 (278)
                      |.+++.++++       .+|++||+||....    +...+.++..+++|+.+...+.+++    ++.+.++||++||..+
T Consensus        79 ~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~  158 (256)
T PRK12859         79 QNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQF  158 (256)
T ss_pred             CHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEccccc
Confidence            9998888775       36999999986433    2223456778999999888775444    4444579999999766


Q ss_pred             eecCCCCCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHH
Q 023689          135 IVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQ  211 (278)
Q Consensus       135 ~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~  211 (278)
                      ..+.++                    ...|+.+|.+.+.+.+.++.+   ++++++.++||.+.++....      ....
T Consensus       159 ~~~~~~--------------------~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~------~~~~  212 (256)
T PRK12859        159 QGPMVG--------------------ELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTE------EIKQ  212 (256)
T ss_pred             CCCCCC--------------------chHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCH------HHHH
Confidence            433322                    257999999999998888765   58999999999998764221      1111


Q ss_pred             HHhhCCCCcccccccCcccHHHHHHHHHhhhcCCC--CCceEEecC
Q 023689          212 QLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLCTN  255 (278)
Q Consensus       212 ~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~  255 (278)
                      .+....+      ...+..++|+|+++.+++....  ..|.++..+
T Consensus       213 ~~~~~~~------~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~d  252 (256)
T PRK12859        213 GLLPMFP------FGRIGEPKDAARLIKFLASEEAEWITGQIIHSE  252 (256)
T ss_pred             HHHhcCC------CCCCcCHHHHHHHHHHHhCccccCccCcEEEeC
Confidence            1211111      2345688999999999876532  245554433

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.88  E-value=2e-21  Score=158.94  Aligned_cols=221  Identities=14%  Similarity=0.074  Sum_probs=148.9

Q ss_pred             cCCceEEEeCcch--hhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            7 KEEETVCVTGANG--FIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         7 ~~~~~vlItGatG--~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      +++|++|||||++  +||++++++|.++|+ .|++..|+....+.++.+..... ...++++|++|+++++++++     
T Consensus         6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~-~v~~~~r~~~~~~~~~~l~~~~g-~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (260)
T PRK06603          6 LQGKKGLITGIANNMSISWAIAQLAKKHGA-ELWFTYQSEVLEKRVKPLAEEIG-CNFVSELDVTNPKSISNLFDDIKEK   83 (260)
T ss_pred             cCCcEEEEECCCCCcchHHHHHHHHHHcCC-EEEEEeCchHHHHHHHHHHHhcC-CceEEEccCCCHHHHHHHHHHHHHH
Confidence            4568999999997  899999999999999 77777765321222222211111 23467899999999888775     


Q ss_pred             --CccEEEEecccCCC--------CCCCCchhhhhhhHHhHHHHHHHHHHhc--CCCEEEEecceeeeecCCCCCCcccc
Q 023689           80 --GCKGVFHVASPCTL--------EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFD  147 (278)
Q Consensus        80 --~~d~vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~  147 (278)
                        ++|++||+|+....        +...+.++..+++|+.+...+++++...  .-+++|++||..+..+.+..      
T Consensus        84 ~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~~------  157 (260)
T PRK06603         84 WGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKVIPNY------  157 (260)
T ss_pred             cCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccccCCCcc------
Confidence              47999999986431        2233567889999999999888876432  12589999986664332221      


Q ss_pred             CCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccc
Q 023689          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (278)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (278)
                                    ..|+.+|...+.+.+.++.+   +|++++++.||.+-++....... ............|      
T Consensus       158 --------------~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~p------  216 (260)
T PRK06603        158 --------------NVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGD-FSTMLKSHAATAP------  216 (260)
T ss_pred             --------------cchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCC-cHHHHHHHHhcCC------
Confidence                          46899999988888887764   58999999999998874321101 1111222222222      


Q ss_pred             ccCcccHHHHHHHHHhhhcCCC--CCceEEecCc
Q 023689          225 WLGAVPVKDVAKAQVLLFESPA--ASGRYLCTNG  256 (278)
Q Consensus       225 ~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~~  256 (278)
                      ...+..++|+|+++++++....  ..|..+..++
T Consensus       217 ~~r~~~pedva~~~~~L~s~~~~~itG~~i~vdg  250 (260)
T PRK06603        217 LKRNTTQEDVGGAAVYLFSELSKGVTGEIHYVDC  250 (260)
T ss_pred             cCCCCCHHHHHHHHHHHhCcccccCcceEEEeCC
Confidence            2346789999999999987533  3455443333

>PRK07069 short chain dehydrogenase; Validated

Probab=99.88  E-value=2.1e-21  Score=158.04  Aligned_cols=208  Identities=18%  Similarity=0.195  Sum_probs=144.9

Q ss_pred             eEEEeCcchhhHHHHHHHHHHCCCCeEEEEecC-CCCCcccc-cCCCC-CCCceEEEEccCCChhhHHHHhc-------C
Q 023689           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFP-GSDSSHLF-ALPGA-GDANLRVFEADVLDSGAVSRAVE-------G   80 (278)
Q Consensus        11 ~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~-~~~~~~~~-~~~~~-~~~~v~~~~~Dl~d~~~~~~~~~-------~   80 (278)
                      +++||||+|+||+++++.|.++|+ +|++..|+ .+..+.+. .+... ....+..+++|++|++++.++++       +
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   79 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGA-KVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGG   79 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            489999999999999999999999 88888886 33222221 11111 11134568899999998877764       5


Q ss_pred             ccEEEEecccCCCC----CCCCchhhhhhhHHh----HHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCC
Q 023689           81 CKGVFHVASPCTLE----DPVDPEKELILPAVQ----GTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (278)
Q Consensus        81 ~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~----~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~  152 (278)
                      +|+|||+||.....    ...+++...+++|+.    ++..+++++++.+.++||++||..++.+.+..           
T Consensus        80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~-----------  148 (251)
T PRK07069         80 LSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPDY-----------  148 (251)
T ss_pred             ccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCCC-----------
Confidence            79999999875432    122345677889987    77788888888777899999997776554332           


Q ss_pred             chhhhhccCchhhhHHHHHHHHHHHHHHhc-----CCceEEEecceeeCCCCCCCCch--hHHHHHHHhhCCCCcccccc
Q 023689          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEKH-----GVDVVAIHPATCLGPLMQPYLNA--SCAVLQQLLQGSKDTQEYHW  225 (278)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~-----~~~~~~lrp~~i~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  225 (278)
                               ..|+.+|...+.+.+.++.+.     +++++.++|+.+.++........  ..........+.+      .
T Consensus       149 ---------~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~------~  213 (251)
T PRK07069        149 ---------TAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVP------L  213 (251)
T ss_pred             ---------chhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCC------C
Confidence                     469999999988888777542     48999999999999864322100  0111112222222      2


Q ss_pred             cCcccHHHHHHHHHhhhcCC
Q 023689          226 LGAVPVKDVAKAQVLLFESP  245 (278)
Q Consensus       226 ~~~i~~~D~a~~~~~~~~~~  245 (278)
                      ..+.+++|+|+++++++..+
T Consensus       214 ~~~~~~~~va~~~~~l~~~~  233 (251)
T PRK07069        214 GRLGEPDDVAHAVLYLASDE  233 (251)
T ss_pred             CCCcCHHHHHHHHHHHcCcc
Confidence            34678999999999987653

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.88  E-value=2.2e-21  Score=177.25  Aligned_cols=225  Identities=18%  Similarity=0.148  Sum_probs=153.1

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCC-CCCCceEEEEccCCChhhHHHHhc--
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPG-AGDANLRVFEADVLDSGAVSRAVE--   79 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~-~~~~~v~~~~~Dl~d~~~~~~~~~--   79 (278)
                      ...+++|++|||||+|+||++++++|+++|+ .|++..|+.+..+... .+.. .....+..+++|++|++++.++++  
T Consensus       409 ~~~l~gkvvLVTGasggIG~aiA~~La~~Ga-~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i  487 (676)
T TIGR02632       409 EKTLARRVAFVTGGAGGIGRETARRLAAEGA-HVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADV  487 (676)
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHH
Confidence            3456689999999999999999999999999 8888888765433221 1110 011257789999999999988876  


Q ss_pred             -----CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHH----HhcC-CCEEEEecceeeeecCCCCCCcc
Q 023689           80 -----GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFG-VRRVVVTSSISAIVPNPGWKGKV  145 (278)
Q Consensus        80 -----~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~----~~~~-~~~~v~~Ss~~~~~~~~~~~~~~  145 (278)
                           ++|+|||+||.....    ...+.+...+++|+.+...+.+.+    ++++ .+++|++||..++++.++.    
T Consensus       488 ~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~~----  563 (676)
T TIGR02632       488 ALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNA----  563 (676)
T ss_pred             HHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCCC----
Confidence                 589999999975431    123456778889988877665443    4444 3589999997776654432    


Q ss_pred             ccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCC-CCCCCCch----------hHHHHH
Q 023689          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGP-LMQPYLNA----------SCAVLQ  211 (278)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~-~~~~~~~~----------~~~~~~  211 (278)
                                      ..|+.+|.+.+.+++.++.+   .|+++++++|+.|+.+ ........          ......
T Consensus       564 ----------------~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~  627 (676)
T TIGR02632       564 ----------------SAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEE  627 (676)
T ss_pred             ----------------HHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHH
Confidence                            57999999999999988875   4899999999999742 21110000          000001


Q ss_pred             HHhhCCCCcccccccCcccHHHHHHHHHhhhcCCC--CCceE-EecC
Q 023689          212 QLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRY-LCTN  255 (278)
Q Consensus       212 ~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~-~~~~  255 (278)
                      ....+.      ....+++++|+|+++.+++....  ..|.+ .+.+
T Consensus       628 ~~~~r~------~l~r~v~peDVA~av~~L~s~~~~~~TG~~i~vDG  668 (676)
T TIGR02632       628 HYAKRT------LLKRHIFPADIAEAVFFLASSKSEKTTGCIITVDG  668 (676)
T ss_pred             HHHhcC------CcCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECC
Confidence            111111      23567899999999998876432  34544 4443

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.88  E-value=1.6e-21  Score=159.85  Aligned_cols=204  Identities=18%  Similarity=0.129  Sum_probs=147.8

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc------C
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------G   80 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~------~   80 (278)
                      .+++++|||||+|+||++++++|+++|+ .|++++|+.+..+.+....... .++.++.+|++|++++.++++      +
T Consensus         3 ~~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~~~~~~~~   80 (263)
T PRK09072          3 LKDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYP-GRHRWVVADLTSEAGREAVLARAREMGG   80 (263)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcC-CceEEEEccCCCHHHHHHHHHHHHhcCC
Confidence            4568999999999999999999999999 8999988765433332111112 278899999999998877654      5


Q ss_pred             ccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHh----cCCCEEEEecceeeeecCCCCCCccccCCCCC
Q 023689           81 CKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (278)
Q Consensus        81 ~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~  152 (278)
                      +|+|||+||.....    ...+.+...+++|+.++.++++++.+    .+.+++|++||..+..+.++.           
T Consensus        81 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~-----------  149 (263)
T PRK09072         81 INVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPGY-----------  149 (263)
T ss_pred             CCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCCCc-----------
Confidence            79999999875431    12234577889999999998888744    345689999987665543332           


Q ss_pred             chhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcc
Q 023689          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (278)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  229 (278)
                               ..|+.+|...+.+++.++.+   .+++++++.||.+.++......       .. ....      ......
T Consensus       150 ---------~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~-------~~-~~~~------~~~~~~  206 (263)
T PRK09072        150 ---------ASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAV-------QA-LNRA------LGNAMD  206 (263)
T ss_pred             ---------cHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhhhc-------cc-cccc------ccCCCC
Confidence                     46999999988888877764   4899999999988776432110       00 0000      012357


Q ss_pred             cHHHHHHHHHhhhcCCC
Q 023689          230 PVKDVAKAQVLLFESPA  246 (278)
Q Consensus       230 ~~~D~a~~~~~~~~~~~  246 (278)
                      .++|+|++++.++++..
T Consensus       207 ~~~~va~~i~~~~~~~~  223 (263)
T PRK09072        207 DPEDVAAAVLQAIEKER  223 (263)
T ss_pred             CHHHHHHHHHHHHhCCC
Confidence            89999999999998753

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.88  E-value=2.2e-21  Score=157.20  Aligned_cols=205  Identities=16%  Similarity=0.081  Sum_probs=140.9

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc---------
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---------   79 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---------   79 (278)
                      ||++|||||||+||++++++|+++|+ .|+++.|+..... ...    ...++.++++|++|.+++.++++         
T Consensus         1 ~~~vlItGasggiG~~ia~~l~~~G~-~v~~~~r~~~~~~-~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   74 (243)
T PRK07023          1 AVRAIVTGHSRGLGAALAEQLLQPGI-AVLGVARSRHPSL-AAA----AGERLAEVELDLSDAAAAAAWLAGDLLAAFVD   74 (243)
T ss_pred             CceEEEecCCcchHHHHHHHHHhCCC-EEEEEecCcchhh-hhc----cCCeEEEEEeccCCHHHHHHHHHHHHHHHhcc
Confidence            57999999999999999999999999 8888888654321 111    11268899999999998887442         


Q ss_pred             --CccEEEEecccCCCC-----CCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccC
Q 023689           80 --GCKGVFHVASPCTLE-----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (278)
Q Consensus        80 --~~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E  148 (278)
                        .+|++||+|+.....     ...+.++..+++|+.++..+.+.+    ++.+.+++|++||..+..+.++        
T Consensus        75 ~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------  146 (243)
T PRK07023         75 GASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAG--------  146 (243)
T ss_pred             CCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCCC--------
Confidence              468999999865431     123456788999999966665554    4445679999999766544322        


Q ss_pred             CCCCchhhhhccCchhhhHHHHHHHHHHHHHHh--cCCceEEEecceeeCCCCCCC----CchhHHHHHHHhhCCCCccc
Q 023689          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK--HGVDVVAIHPATCLGPLMQPY----LNASCAVLQQLLQGSKDTQE  222 (278)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~--~~~~~~~lrp~~i~g~~~~~~----~~~~~~~~~~~~~~~~~~~~  222 (278)
                                  ...|+.+|...|.+++.++.+  .++++++++||.+-++.....    .... .....+....     
T Consensus       147 ------------~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~-~~~~~~~~~~-----  208 (243)
T PRK07023        147 ------------WSVYCATKAALDHHARAVALDANRALRIVSLAPGVVDTGMQATIRATDEERF-PMRERFRELK-----  208 (243)
T ss_pred             ------------chHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccHHHHHHHhcccccc-hHHHHHHHhh-----
Confidence                        157999999999999988864  589999999999877632100    0000 0000111100     


Q ss_pred             ccccCcccHHHHHHHHHhhhcCCC
Q 023689          223 YHWLGAVPVKDVAKAQVLLFESPA  246 (278)
Q Consensus       223 ~~~~~~i~~~D~a~~~~~~~~~~~  246 (278)
                       ....++.++|+|+.++..+.++.
T Consensus       209 -~~~~~~~~~~va~~~~~~l~~~~  231 (243)
T PRK07023        209 -ASGALSTPEDAARRLIAYLLSDD  231 (243)
T ss_pred             -hcCCCCCHHHHHHHHHHHHhccc
Confidence             02346788999997666665544

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.88  E-value=3.1e-21  Score=158.35  Aligned_cols=214  Identities=18%  Similarity=0.100  Sum_probs=144.7

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCC-CCCceEEEEccCCChhhHHHHhc----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGA-GDANLRVFEADVLDSGAVSRAVE----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~-~~~~v~~~~~Dl~d~~~~~~~~~----   79 (278)
                      .+++|++|||||+|+||++++++|+++|+ .|++..|+.+..+... .+... ...++..+.+|++|++++.++++    
T Consensus         5 ~l~~k~~lItGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   83 (265)
T PRK07062          5 QLEGRVAVVTGGSSGIGLATVELLLEAGA-SVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEA   83 (265)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHH
Confidence            45679999999999999999999999999 8888888765433221 11111 11267889999999998877764    


Q ss_pred             ---CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccC
Q 023689           80 ---GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (278)
Q Consensus        80 ---~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E  148 (278)
                         .+|++||+||....    +...+.+...+++|+.+...+++++    ++.+.+++|++||..+..+.+..       
T Consensus        84 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------  156 (265)
T PRK07062         84 RFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPHM-------  156 (265)
T ss_pred             hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCCCc-------
Confidence               47999999986443    1223457788899987776666554    44556799999997765443321       


Q ss_pred             CCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCc-------hhHHHHHHHhhCCC
Q 023689          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN-------ASCAVLQQLLQGSK  218 (278)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~-------~~~~~~~~~~~~~~  218 (278)
                                   ..|+.+|...+.+.+.++.+   .|+++++++||.+.++.......       ..............
T Consensus       157 -------------~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (265)
T PRK07062        157 -------------VATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKG  223 (265)
T ss_pred             -------------hHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCC
Confidence                         45778888777766666553   58999999999998875321100       00111111110000


Q ss_pred             CcccccccCcccHHHHHHHHHhhhcC
Q 023689          219 DTQEYHWLGAVPVKDVAKAQVLLFES  244 (278)
Q Consensus       219 ~~~~~~~~~~i~~~D~a~~~~~~~~~  244 (278)
                        .  ....+..++|+|+++++++..
T Consensus       224 --~--p~~r~~~p~~va~~~~~L~s~  245 (265)
T PRK07062        224 --I--PLGRLGRPDEAARALFFLASP  245 (265)
T ss_pred             --C--CcCCCCCHHHHHHHHHHHhCc
Confidence              0  123467899999999998864

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.88  E-value=2.5e-21  Score=158.41  Aligned_cols=215  Identities=15%  Similarity=0.084  Sum_probs=144.0

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc-------Cc
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~   81 (278)
                      |++|||||+|+||++++++|.++|+ .|++..|+++..+... .+.. .. ++.++++|++|++++.++++       ++
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~-~~-~~~~~~~Dv~d~~~~~~~~~~~~~~~g~i   77 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKE-YG-EVYAVKADLSDKDDLKNLVKEAWELLGGI   77 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHh-cC-CceEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            5899999999999999999999999 8888888764432221 1211 11 67889999999998888764       57


Q ss_pred             cEEEEecccCCC------CCCCCchhhhhhhHHhHHHHHH----HHHH-hcCCCEEEEecceeeeecCCCCCCccccCCC
Q 023689           82 KGVFHVASPCTL------EDPVDPEKELILPAVQGTLNVL----EAAK-RFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (278)
Q Consensus        82 d~vi~~a~~~~~------~~~~~~~~~~~~~n~~~~~~ll----~~~~-~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~  150 (278)
                      |++||+||....      +....++...+++|+.++..+.    ..+. +.+.++||++||..+..+.+..         
T Consensus        78 d~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~~---------  148 (259)
T PRK08340         78 DALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPPL---------  148 (259)
T ss_pred             CEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCCc---------
Confidence            999999986431      1122345566778877655444    3333 3345789999997664433221         


Q ss_pred             CCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCc--------hhHH-HHHHHhhCCC
Q 023689          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLN--------ASCA-VLQQLLQGSK  218 (278)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~--------~~~~-~~~~~~~~~~  218 (278)
                                 ..|+.+|...+.+.+.++.+.   |++++.+.||.+-++.......        .... .........|
T Consensus       149 -----------~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  217 (259)
T PRK08340        149 -----------VLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTP  217 (259)
T ss_pred             -----------hHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCC
Confidence                       468889988888888888754   8999999999998875321100        0000 1111111111


Q ss_pred             CcccccccCcccHHHHHHHHHhhhcCCC--CCceEEe
Q 023689          219 DTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLC  253 (278)
Q Consensus       219 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~  253 (278)
                            ...+..++|+|+++.+++....  ..|..+.
T Consensus       218 ------~~r~~~p~dva~~~~fL~s~~~~~itG~~i~  248 (259)
T PRK08340        218 ------LKRTGRWEELGSLIAFLLSENAEYMLGSTIV  248 (259)
T ss_pred             ------ccCCCCHHHHHHHHHHHcCcccccccCceEe
Confidence                  2346789999999999987543  2455443

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.88  E-value=3e-21  Score=158.72  Aligned_cols=223  Identities=13%  Similarity=0.069  Sum_probs=151.0

Q ss_pred             cCCceEEEeCcc--hhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            7 KEEETVCVTGAN--GFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         7 ~~~~~vlItGat--G~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      +++|++|||||+  ++||++++++|.++|+ .|++..|+....+.+..+..... ...++++|++|+++++++++     
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la~~G~-~V~l~~r~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~   85 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACRAAGA-ELAFTYQGDALKKRVEPLAAELG-AFVAGHCDVTDEASIDAVFETLEKK   85 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHHHhcC-CceEEecCCCCHHHHHHHHHHHHHh
Confidence            456899999997  8999999999999999 77777665322222222211111 35678999999999888765     


Q ss_pred             --CccEEEEecccCCC--------CCCCCchhhhhhhHHhHHHHHHHHHHhc--CCCEEEEecceeeeecCCCCCCcccc
Q 023689           80 --GCKGVFHVASPCTL--------EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFD  147 (278)
Q Consensus        80 --~~d~vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~  147 (278)
                        ++|++||+||....        +...+.++..+++|+.++..+++++...  +-+++|++||.++..+.+.       
T Consensus        86 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~p~-------  158 (272)
T PRK08159         86 WGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKVMPH-------  158 (272)
T ss_pred             cCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccCCCc-------
Confidence              47999999987531        1233467889999999999999887553  2368999998655433222       


Q ss_pred             CCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhh-CCCCcccc
Q 023689          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQ-GSKDTQEY  223 (278)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~  223 (278)
                              +     ..|+.+|...+.+.+.++.+   +|++++++.||.+.++....... . ........ ..|     
T Consensus       159 --------~-----~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~-~-~~~~~~~~~~~p-----  218 (272)
T PRK08159        159 --------Y-----NVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGD-F-RYILKWNEYNAP-----  218 (272)
T ss_pred             --------c-----hhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCc-c-hHHHHHHHhCCc-----
Confidence                    1     56999999998888888765   48999999999998864321111 0 01111111 112     


Q ss_pred             cccCcccHHHHHHHHHhhhcCCC--CCceEEecCcccc
Q 023689          224 HWLGAVPVKDVAKAQVLLFESPA--ASGRYLCTNGIYQ  259 (278)
Q Consensus       224 ~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~~~~s  259 (278)
                       ...+..++|+|+++++++....  ..|..+..++.+.
T Consensus       219 -~~r~~~peevA~~~~~L~s~~~~~itG~~i~vdgG~~  255 (272)
T PRK08159        219 -LRRTVTIEEVGDSALYLLSDLSRGVTGEVHHVDSGYH  255 (272)
T ss_pred             -ccccCCHHHHHHHHHHHhCccccCccceEEEECCCce
Confidence             2345789999999999987543  3465554444443

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.88  E-value=8e-21  Score=155.01  Aligned_cols=219  Identities=16%  Similarity=0.127  Sum_probs=146.5

Q ss_pred             ccccCCceEEEeCc--chhhHHHHHHHHHHCCCCeEEEEecCC--CCCcccccCCCCCCCceEEEEccCCChhhHHHHhc
Q 023689            4 EAEKEEETVCVTGA--NGFIGTWLVKTLLDNNYTSINATVFPG--SDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE   79 (278)
Q Consensus         4 m~~~~~~~vlItGa--tG~iG~~l~~~L~~~g~~~v~~~~r~~--~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~   79 (278)
                      |+.+++|+++||||  +++||.+++++|.++|+ .|++..|+.  +..+.+....  .. .+.++++|++|+++++++++
T Consensus         2 ~~~~~~k~~lItGa~~s~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~--~~-~~~~~~~Dv~~~~~i~~~~~   77 (256)
T PRK07889          2 MGLLEGKRILVTGVITDSSIAFHVARVAQEQGA-EVVLTGFGRALRLTERIAKRL--PE-PAPVLELDVTNEEHLASLAD   77 (256)
T ss_pred             cccccCCEEEEeCCCCcchHHHHHHHHHHHCCC-EEEEecCccchhHHHHHHHhc--CC-CCcEEeCCCCCHHHHHHHHH
Confidence            45677899999999  89999999999999999 888877653  1112221111  11 57789999999998888764


Q ss_pred             -------CccEEEEecccCCC--------CCCCCchhhhhhhHHhHHHHHHHHHHhc--CCCEEEEecceeeeecCCCCC
Q 023689           80 -------GCKGVFHVASPCTL--------EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWK  142 (278)
Q Consensus        80 -------~~d~vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~Ss~~~~~~~~~~~  142 (278)
                             ++|++||+||....        +...+.++..+++|+.++..+.+++...  .-+++|++|+... .+.+   
T Consensus        78 ~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~-~~~~---  153 (256)
T PRK07889         78 RVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDAT-VAWP---  153 (256)
T ss_pred             HHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeeccc-ccCC---
Confidence                   57999999997532        1123455677999999988888776432  2257888875321 1111   


Q ss_pred             CccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCC
Q 023689          143 GKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKD  219 (278)
Q Consensus       143 ~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~  219 (278)
                                  .|     ..|+.+|...+.+.+.++.+   +|++++++.||.+.++....... ............|.
T Consensus       154 ------------~~-----~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~p~  215 (256)
T PRK07889        154 ------------AY-----DWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPG-FELLEEGWDERAPL  215 (256)
T ss_pred             ------------cc-----chhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccC-cHHHHHHHHhcCcc
Confidence                        12     46888888888887777764   58999999999998875332111 11111111121221


Q ss_pred             cccccccCcccHHHHHHHHHhhhcCCC--CCceEEe
Q 023689          220 TQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLC  253 (278)
Q Consensus       220 ~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~  253 (278)
                           .+.+..++|+|+++++++....  ..|.++.
T Consensus       216 -----~~~~~~p~evA~~v~~l~s~~~~~~tG~~i~  246 (256)
T PRK07889        216 -----GWDVKDPTPVARAVVALLSDWFPATTGEIVH  246 (256)
T ss_pred             -----ccccCCHHHHHHHHHHHhCcccccccceEEE
Confidence                 1246789999999999987543  2455443

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.88  E-value=1e-20  Score=158.20  Aligned_cols=231  Identities=18%  Similarity=0.179  Sum_probs=156.6

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCC-CCccc-ccCCCCCCCceEEEEccCCChhhHHHHhc----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS-DSSHL-FALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~-~~~~~-~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~----   79 (278)
                      .+++|++|||||+|+||++++++|+++|+ .|++..++.. ..+.. ..+...+. ++.++.+|++|.+++.++++    
T Consensus         9 ~l~~k~~lVTGas~gIG~~ia~~L~~~Ga-~Vv~~~~~~~~~~~~~~~~i~~~g~-~~~~~~~Dv~d~~~~~~~~~~~~~   86 (306)
T PRK07792          9 DLSGKVAVVTGAAAGLGRAEALGLARLGA-TVVVNDVASALDASDVLDEIRAAGA-KAVAVAGDISQRATADELVATAVG   86 (306)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCchhHHHHHHHHHHhcCC-eEEEEeCCCCCHHHHHHHHHHHHH
Confidence            56789999999999999999999999999 7777766432 21111 11211122 78899999999988888765    


Q ss_pred             --CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHhc-----------CCCEEEEecceeeeecCCCCC
Q 023689           80 --GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF-----------GVRRVVVTSSISAIVPNPGWK  142 (278)
Q Consensus        80 --~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~-----------~~~~~v~~Ss~~~~~~~~~~~  142 (278)
                        ++|++||+||.....    ....+++..+++|+.++.++++++..+           ..+++|++||.++..+.++. 
T Consensus        87 ~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-  165 (306)
T PRK07792         87 LGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQ-  165 (306)
T ss_pred             hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCCCC-
Confidence              579999999975432    223467788999999999998876421           12589999997765543332 


Q ss_pred             CccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCC
Q 023689          143 GKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKD  219 (278)
Q Consensus       143 ~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~  219 (278)
                                         ..|+.+|.+.+.+.+.++.+   +|++++++.|+. .++.....       +    ...+.
T Consensus       166 -------------------~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~~~~~~-------~----~~~~~  214 (306)
T PRK07792        166 -------------------ANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTAMTADV-------F----GDAPD  214 (306)
T ss_pred             -------------------chHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCchhhhh-------c----cccch
Confidence                               46999999999988887764   689999999973 22221110       0    00000


Q ss_pred             cccccccCcccHHHHHHHHHhhhcCCC--CCc-eEEec-------------------CccccHHHHHHHHHHhC
Q 023689          220 TQEYHWLGAVPVKDVAKAQVLLFESPA--ASG-RYLCT-------------------NGIYQFGDFAERVSKLF  271 (278)
Q Consensus       220 ~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~-------------------~~~~s~~e~~~~i~~~~  271 (278)
                       .......+++++|+|.++.+++....  ..| .+.+.                   +++++..|+.+.+.+.+
T Consensus       215 -~~~~~~~~~~pe~va~~v~~L~s~~~~~~tG~~~~v~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (306)
T PRK07792        215 -VEAGGIDPLSPEHVVPLVQFLASPAAAEVNGQVFIVYGPMVTLVAAPVVERRFDADGDAWDPGELSATLRDYF  287 (306)
T ss_pred             -hhhhccCCCCHHHHHHHHHHHcCccccCCCCCEEEEcCCeEEEEeeeeecceecCCCCCCCHHHHHHHHHHHh
Confidence             00012345689999999988876432  233 22221                   14578888888888874

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.88  E-value=4.3e-21  Score=156.96  Aligned_cols=227  Identities=17%  Similarity=0.137  Sum_probs=152.9

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCCCCCCceEEEEccCCChhhHHHHhc---Cc
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE---GC   81 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~---~~   81 (278)
                      .+++|++|||||+|+||++++++|.++|+ .|+++.|+.+....... +......++.++.+|++|++++.++++   .+
T Consensus         4 ~~~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~i   82 (259)
T PRK06125          4 HLAGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDI   82 (259)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCC
Confidence            45679999999999999999999999999 89888887654333211 111111268899999999999888775   58


Q ss_pred             cEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccCCCCCc
Q 023689           82 KGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (278)
Q Consensus        82 d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~  153 (278)
                      |++||+||....    +...++++..+++|+.+...+++++    ++.+.+++|++||..+..+...             
T Consensus        83 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~-------------  149 (259)
T PRK06125         83 DILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDAD-------------  149 (259)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCCC-------------
Confidence            999999986543    1223466888999999888877766    4444568999998665433221             


Q ss_pred             hhhhhccCchhhhHHHHHHHHHHHHHH---hcCCceEEEecceeeCCCCCCCC-------chhHHHHHHHhhCCCCcccc
Q 023689          154 LEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYL-------NASCAVLQQLLQGSKDTQEY  223 (278)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lrp~~i~g~~~~~~~-------~~~~~~~~~~~~~~~~~~~~  223 (278)
                        +     ..|+.+|.+.+.+.+.++.   .+|++++.++||.+.++......       ..............|     
T Consensus       150 --~-----~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  217 (259)
T PRK06125        150 --Y-----ICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLP-----  217 (259)
T ss_pred             --c-----hHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhccCC-----
Confidence              1     4588889888888877765   35899999999999887421100       000111111111111     


Q ss_pred             cccCcccHHHHHHHHHhhhcCCC--CCceEEecCcccc
Q 023689          224 HWLGAVPVKDVAKAQVLLFESPA--ASGRYLCTNGIYQ  259 (278)
Q Consensus       224 ~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~~~~s  259 (278)
                       ...+..++|+|+++++++....  ..|..+..++..+
T Consensus       218 -~~~~~~~~~va~~~~~l~~~~~~~~~G~~i~vdgg~~  254 (259)
T PRK06125        218 -LGRPATPEEVADLVAFLASPRSGYTSGTVVTVDGGIS  254 (259)
T ss_pred             -cCCCcCHHHHHHHHHHHcCchhccccCceEEecCCee
Confidence             2346789999999999986432  3455443333333

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.87  E-value=2.9e-21  Score=156.91  Aligned_cols=203  Identities=17%  Similarity=0.164  Sum_probs=145.0

Q ss_pred             cccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCC--ChhhHHHHh---
Q 023689            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVL--DSGAVSRAV---   78 (278)
Q Consensus         5 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~--d~~~~~~~~---   78 (278)
                      ..+++|++|||||+|+||.+++++|++.|+ .|++++|+.+..+.+. .+......+++++.+|++  +++++.+++   
T Consensus         8 ~~~~~k~vlItG~~g~iG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~   86 (247)
T PRK08945          8 DLLKDRIILVTGAGDGIGREAALTYARHGA-TVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTI   86 (247)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHH
Confidence            345679999999999999999999999999 8888988765432221 121112226778888886  555555443   


Q ss_pred             ----cCccEEEEecccCCC-----CCCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCcc
Q 023689           79 ----EGCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKV  145 (278)
Q Consensus        79 ----~~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~  145 (278)
                          ..+|+|||+|+....     +...+.++..+++|+.++.++++++    ++++.++||++||..+..+.+..    
T Consensus        87 ~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~----  162 (247)
T PRK08945         87 EEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRANW----  162 (247)
T ss_pred             HHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCCCC----
Confidence                367999999986433     2223456888999999988888876    45567899999997665443332    


Q ss_pred             ccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccc
Q 023689          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQE  222 (278)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (278)
                                      ..|+.+|.+.+.+++.++.+.   ++++++++|+.+.++......           ....    
T Consensus       163 ----------------~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~~-----------~~~~----  211 (247)
T PRK08945        163 ----------------GAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAF-----------PGED----  211 (247)
T ss_pred             ----------------cccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhhc-----------Cccc----
Confidence                            469999999999988887654   799999999988776422110           0000    


Q ss_pred             ccccCcccHHHHHHHHHhhhcCC
Q 023689          223 YHWLGAVPVKDVAKAQVLLFESP  245 (278)
Q Consensus       223 ~~~~~~i~~~D~a~~~~~~~~~~  245 (278)
                        ...+..++|+++.+.+++...
T Consensus       212 --~~~~~~~~~~~~~~~~~~~~~  232 (247)
T PRK08945        212 --PQKLKTPEDIMPLYLYLMGDD  232 (247)
T ss_pred             --ccCCCCHHHHHHHHHHHhCcc
Confidence              124678899999999987543

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.87  E-value=9.3e-21  Score=151.44  Aligned_cols=190  Identities=17%  Similarity=0.123  Sum_probs=143.8

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc-----CccE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----GCKG   83 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----~~d~   83 (278)
                      ||+++||||+|+||++++++|++.|+ +|+++.|+.+..+.+...      +++++.+|++|.+++.++++     ++|+
T Consensus         1 ~~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~~~~~~~------~~~~~~~D~~~~~~v~~~~~~~~~~~~d~   73 (222)
T PRK06953          1 MKTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAALAALQAL------GAEALALDVADPASVAGLAWKLDGEALDA   73 (222)
T ss_pred             CceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHHHHHHhc------cceEEEecCCCHHHHHHHHHHhcCCCCCE
Confidence            57999999999999999999999999 898888876554433321      56789999999998888642     4799


Q ss_pred             EEEecccCCC------CCCCCchhhhhhhHHhHHHHHHHHHHhc---CCCEEEEecceeeeecCCCCCCccccCCCCCch
Q 023689           84 VFHVASPCTL------EDPVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDL  154 (278)
Q Consensus        84 vi~~a~~~~~------~~~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~  154 (278)
                      |||+++....      ....++++..+++|+.++.++++++.+.   ..++++++||..+.++....             
T Consensus        74 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------------  140 (222)
T PRK06953         74 AVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDATG-------------  140 (222)
T ss_pred             EEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccccC-------------
Confidence            9999987532      1134467889999999999999988642   23579999987665442110             


Q ss_pred             hhhhccCchhhhHHHHHHHHHHHHHHhc-CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHHH
Q 023689          155 EYCKSRKKWYPVSKTLAEKAAWEFAEKH-GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKD  233 (278)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~~-~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  233 (278)
                          .+...|+.+|...+.+++.++.+. +++++.++||.+.++....                        ...+..++
T Consensus       141 ----~~~~~Y~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~~~------------------------~~~~~~~~  192 (222)
T PRK06953        141 ----TTGWLYRASKAALNDALRAASLQARHATCIALHPGWVRTDMGGA------------------------QAALDPAQ  192 (222)
T ss_pred             ----CCccccHHhHHHHHHHHHHHhhhccCcEEEEECCCeeecCCCCC------------------------CCCCCHHH
Confidence                011359999999999999888665 8999999999999885321                        11357788


Q ss_pred             HHHHHHhhhcCCC
Q 023689          234 VAKAQVLLFESPA  246 (278)
Q Consensus       234 ~a~~~~~~~~~~~  246 (278)
                      .++.+..++....
T Consensus       193 ~~~~~~~~~~~~~  205 (222)
T PRK06953        193 SVAGMRRVIAQAT  205 (222)
T ss_pred             HHHHHHHHHHhcC
Confidence            8888888776543

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.87  E-value=1.7e-21  Score=163.39  Aligned_cols=188  Identities=20%  Similarity=0.146  Sum_probs=136.8

Q ss_pred             cccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccc-ccCCCC-CCCceEEEEccCCChhhHHHHhc-
Q 023689            3 SEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL-FALPGA-GDANLRVFEADVLDSGAVSRAVE-   79 (278)
Q Consensus         3 ~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~-~~~~~~-~~~~v~~~~~Dl~d~~~~~~~~~-   79 (278)
                      +|..+++|+++||||+|+||.+++++|.++|+ .|++..|+.+..+.. ..+... ...++.++++|++|.+++.++++ 
T Consensus         8 ~~~~l~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~   86 (313)
T PRK05854          8 TVPDLSGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQ   86 (313)
T ss_pred             cCcccCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHH
Confidence            45566789999999999999999999999999 888888876543222 111111 11268899999999999888765 


Q ss_pred             ------CccEEEEecccCCC---CCCCCchhhhhhhHHhHHHHHHHHHHh---cCCCEEEEecceeeeecCCCCCCcccc
Q 023689           80 ------GCKGVFHVASPCTL---EDPVDPEKELILPAVQGTLNVLEAAKR---FGVRRVVVTSSISAIVPNPGWKGKVFD  147 (278)
Q Consensus        80 ------~~d~vi~~a~~~~~---~~~~~~~~~~~~~n~~~~~~ll~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~  147 (278)
                            .+|++||+||....   ....+.++..+.+|+.+...+.+.+..   .+.+++|++||.....+....  ..+.
T Consensus        87 ~~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~--~~~~  164 (313)
T PRK05854         87 LRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINW--DDLN  164 (313)
T ss_pred             HHHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCc--cccc
Confidence                  47999999997543   223467788999999998877776642   234689999997776543222  2222


Q ss_pred             CCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh-----cCCceEEEecceeeCCCC
Q 023689          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK-----HGVDVVAIHPATCLGPLM  199 (278)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-----~~~~~~~lrp~~i~g~~~  199 (278)
                      ++...      .....|+.||.+.+.+.+.++++     .|+.++++.||.+.++..
T Consensus       165 ~~~~~------~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~  215 (313)
T PRK05854        165 WERSY------AGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLL  215 (313)
T ss_pred             ccccC------cchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCcc
Confidence            22211      11257999999999999988763     479999999999988754

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.87  E-value=5.6e-21  Score=154.67  Aligned_cols=205  Identities=20%  Similarity=0.186  Sum_probs=142.4

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecC-CCCCccc-ccCCCCCCCceEEEEccCCChhhHHHHhc-------C
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFP-GSDSSHL-FALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~-~~~~~~~-~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~   80 (278)
                      |++|||||+|+||++++++|+++|+ .|+++.|+ ....... ....... .++.++.+|++|++++.++++       .
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGY-RVAANCGPNEERAEAWLQEQGALG-FDFRVVEGDVSSFESCKAAVAKVEAELGP   78 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhhC-CceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            5899999999999999999999999 78877773 2221111 1111111 278899999999988877664       4


Q ss_pred             ccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHH----HHHhcCCCEEEEecceeeeecCCCCCCccccCCCCC
Q 023689           81 CKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLE----AAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (278)
Q Consensus        81 ~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~----~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~  152 (278)
                      +|+|||+||....    ....++++..+++|+.++..+++    .+++.+.+++|++||..+..+..+.           
T Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~-----------  147 (242)
T TIGR01829        79 IDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFGQ-----------  147 (242)
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCc-----------
Confidence            7999999986542    22234567788999998777554    4455677899999986655433221           


Q ss_pred             chhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcc
Q 023689          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (278)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  229 (278)
                               ..|+.+|...+.+.+.++++   .+++++.++|+.+.++.....   ............+      ...+.
T Consensus       148 ---------~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~---~~~~~~~~~~~~~------~~~~~  209 (242)
T TIGR01829       148 ---------TNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMAM---REDVLNSIVAQIP------VGRLG  209 (242)
T ss_pred             ---------chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCcccccc---chHHHHHHHhcCC------CCCCc
Confidence                     46999999888777776653   489999999999998864332   1222222322222      23456


Q ss_pred             cHHHHHHHHHhhhcCC
Q 023689          230 PVKDVAKAQVLLFESP  245 (278)
Q Consensus       230 ~~~D~a~~~~~~~~~~  245 (278)
                      .++|+++++.++..++
T Consensus       210 ~~~~~a~~~~~l~~~~  225 (242)
T TIGR01829       210 RPEEIAAAVAFLASEE  225 (242)
T ss_pred             CHHHHHHHHHHHcCch
Confidence            7899999998877653

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.87  E-value=3.8e-21  Score=155.40  Aligned_cols=202  Identities=22%  Similarity=0.214  Sum_probs=144.4

Q ss_pred             EEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCC-CCccc-ccCCCCCCCceEEEEccCCChhhHHHHhc-------Ccc
Q 023689           12 VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS-DSSHL-FALPGAGDANLRVFEADVLDSGAVSRAVE-------GCK   82 (278)
Q Consensus        12 vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~-~~~~~-~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d   82 (278)
                      +|||||+|+||.+++++|.++|+ +|++..|+.+ ..+.. ..+..... ++.++.+|++|.+++.++++       .+|
T Consensus         1 vlItGas~giG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~   78 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGF-EICVHYHSGRSDAESVVSAIQAQGG-NARLLQFDVADRVACRTLLEADIAEHGAYY   78 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHHcCC-eEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            58999999999999999999999 7777766432 22111 11111122 78999999999998887765       469


Q ss_pred             EEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHH-----HhcCCCEEEEecceeeeecCCCCCCccccCCCCCc
Q 023689           83 GVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA-----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (278)
Q Consensus        83 ~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~-----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~  153 (278)
                      ++||+||....    +...++++..+++|+.++.++++++     ++.+.+++|++||.++.++.+..            
T Consensus        79 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~------------  146 (239)
T TIGR01831        79 GVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRGQ------------  146 (239)
T ss_pred             EEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCCC------------
Confidence            99999986543    1234567889999999999998865     22445789999998877664432            


Q ss_pred             hhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCccc
Q 023689          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP  230 (278)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  230 (278)
                              ..|+.+|.+.+.+.+.++.+   .|++++.++||.+.++.....    ...........|      ...+..
T Consensus       147 --------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~----~~~~~~~~~~~~------~~~~~~  208 (239)
T TIGR01831       147 --------VNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAEV----EHDLDEALKTVP------MNRMGQ  208 (239)
T ss_pred             --------cchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchhh----hHHHHHHHhcCC------CCCCCC
Confidence                    46888998888777777654   489999999999988864432    111122222222      234678


Q ss_pred             HHHHHHHHHhhhcCC
Q 023689          231 VKDVAKAQVLLFESP  245 (278)
Q Consensus       231 ~~D~a~~~~~~~~~~  245 (278)
                      ++|+++++.+++...
T Consensus       209 ~~~va~~~~~l~~~~  223 (239)
T TIGR01831       209 PAEVASLAGFLMSDG  223 (239)
T ss_pred             HHHHHHHHHHHcCch
Confidence            899999999998754

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.87  E-value=5.7e-21  Score=157.35  Aligned_cols=207  Identities=18%  Similarity=0.120  Sum_probs=141.7

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccc-ccCCCCCCCceEEEEccCCChhhHHHHhc-------Cc
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL-FALPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~-~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~   81 (278)
                      |+++||||+|+||++++++|.++|+ .|+++.|+.+..+.. ..+.......+.++.+|++|++++.++++       ++
T Consensus         1 k~vlItGas~giG~~la~~la~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGA-ELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSM   79 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            5799999999999999999999999 788888865432222 11111112134567899999988777654       47


Q ss_pred             cEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHHHh----c-CCCEEEEecceeeeecCCCCCCccccCCCCC
Q 023689           82 KGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKR----F-GVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (278)
Q Consensus        82 d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~----~-~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~  152 (278)
                      |+|||+||....    +...++++..+++|+.++.++++++..    . ..+++|++||..+..+.+..           
T Consensus        80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~-----------  148 (272)
T PRK07832         80 DVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPWH-----------  148 (272)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCCC-----------
Confidence            999999986543    223345688899999999999998742    2 24689999997665443321           


Q ss_pred             chhhhhccCchhhhHHHHHHHHHHHHHH---hcCCceEEEecceeeCCCCCCCC----chhHHHHHHHhhCCCCcccccc
Q 023689          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYL----NASCAVLQQLLQGSKDTQEYHW  225 (278)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lrp~~i~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~  225 (278)
                               ..|+.+|...+.+.+.++.   .+++++++++||.+.++......    .............       ..
T Consensus       149 ---------~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-------~~  212 (272)
T PRK07832        149 ---------AAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVDR-------FR  212 (272)
T ss_pred             ---------cchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHHh-------cc
Confidence                     4688899877766665553   46899999999999988643210    0000101111100       12


Q ss_pred             cCcccHHHHHHHHHhhhcC
Q 023689          226 LGAVPVKDVAKAQVLLFES  244 (278)
Q Consensus       226 ~~~i~~~D~a~~~~~~~~~  244 (278)
                      ...+.++|+|+.++.++.+
T Consensus       213 ~~~~~~~~vA~~~~~~~~~  231 (272)
T PRK07832        213 GHAVTPEKAAEKILAGVEK  231 (272)
T ss_pred             cCCCCHHHHHHHHHHHHhc
Confidence            3457999999999999964

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.87  E-value=1.1e-20  Score=148.53  Aligned_cols=179  Identities=18%  Similarity=0.181  Sum_probs=136.1

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc---CccEEEE
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---GCKGVFH   86 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---~~d~vi~   86 (278)
                      |++|||||+|+||++++++|.++ + .|++..|+..                 .+++|++|+++++++++   ++|++||
T Consensus         1 ~~vlItGas~giG~~la~~l~~~-~-~vi~~~r~~~-----------------~~~~D~~~~~~~~~~~~~~~~id~lv~   61 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR-H-EVITAGRSSG-----------------DVQVDITDPASIRALFEKVGKVDAVVS   61 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc-C-cEEEEecCCC-----------------ceEecCCChHHHHHHHHhcCCCCEEEE
Confidence            47999999999999999999998 7 8888887542                 35699999999988876   6899999


Q ss_pred             ecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHhc--CCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhcc
Q 023689           87 VASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSR  160 (278)
Q Consensus        87 ~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  160 (278)
                      +||.....    ...+++...+++|+.++.++++++.+.  +.++|+++||..+..+.++.                   
T Consensus        62 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~~~~~-------------------  122 (199)
T PRK07578         62 AAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEPIPGG-------------------  122 (199)
T ss_pred             CCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCCCCCc-------------------
Confidence            99865432    223457788999999999999987553  33679999987765443322                   


Q ss_pred             CchhhhHHHHHHHHHHHHHHh--cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHHHHHHHH
Q 023689          161 KKWYPVSKTLAEKAAWEFAEK--HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQ  238 (278)
Q Consensus       161 ~~~y~~sK~~~e~~~~~~~~~--~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  238 (278)
                       ..|+.+|...+.+.+.++.+  .|++++.++||.+-++....         ....       +  ...+++++|+|+.+
T Consensus       123 -~~Y~~sK~a~~~~~~~la~e~~~gi~v~~i~Pg~v~t~~~~~---------~~~~-------~--~~~~~~~~~~a~~~  183 (199)
T PRK07578        123 -ASAATVNGALEGFVKAAALELPRGIRINVVSPTVLTESLEKY---------GPFF-------P--GFEPVPAARVALAY  183 (199)
T ss_pred             -hHHHHHHHHHHHHHHHHHHHccCCeEEEEEcCCcccCchhhh---------hhcC-------C--CCCCCCHHHHHHHH
Confidence             57999999999988888774  58999999999886543110         0000       0  13468999999999


Q ss_pred             HhhhcCC
Q 023689          239 VLLFESP  245 (278)
Q Consensus       239 ~~~~~~~  245 (278)
                      ..++++.
T Consensus       184 ~~~~~~~  190 (199)
T PRK07578        184 VRSVEGA  190 (199)
T ss_pred             HHHhccc
Confidence            9998764

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.87  E-value=6.9e-21  Score=141.16  Aligned_cols=209  Identities=19%  Similarity=0.184  Sum_probs=163.4

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc-------
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------   79 (278)
                      ..|..+||||+.+||++++..|.++|+ +|...+++...++... .+.+.  .+...+.+|+.+..+++..++       
T Consensus        13 ~sk~~~vtGg~sGIGrAia~~la~~Ga-rv~v~dl~~~~A~ata~~L~g~--~~h~aF~~DVS~a~~v~~~l~e~~k~~g   89 (256)
T KOG1200|consen   13 MSKVAAVTGGSSGIGRAIAQLLAKKGA-RVAVADLDSAAAEATAGDLGGY--GDHSAFSCDVSKAHDVQNTLEEMEKSLG   89 (256)
T ss_pred             hcceeEEecCCchHHHHHHHHHHhcCc-EEEEeecchhhHHHHHhhcCCC--CccceeeeccCcHHHHHHHHHHHHHhcC
Confidence            457899999999999999999999999 7777776655444333 34332  266788999999988777554       


Q ss_pred             CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHHHhc------CCCEEEEecceeeeecCCCCCCccccCC
Q 023689           80 GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKRF------GVRRVVVTSSISAIVPNPGWKGKVFDET  149 (278)
Q Consensus        80 ~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~------~~~~~v~~Ss~~~~~~~~~~~~~~~~E~  149 (278)
                      .+++++||||+...    ....++|+..+.+|+.|+....+++.+.      +..++|++||+-+..++.+.        
T Consensus        90 ~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQ--------  161 (256)
T KOG1200|consen   90 TPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQ--------  161 (256)
T ss_pred             CCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccc--------
Confidence            57999999998765    3345789999999999998887776332      23389999998887776653        


Q ss_pred             CCCchhhhhccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcc
Q 023689          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (278)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  229 (278)
                          ..|.++|....|++|.++.++.     +.+++++.+.||+|-+|.....   .+..+.++....|      ...+-
T Consensus       162 ----tnYAAsK~GvIgftktaArEla-----~knIrvN~VlPGFI~tpMT~~m---p~~v~~ki~~~iP------mgr~G  223 (256)
T KOG1200|consen  162 ----TNYAASKGGVIGFTKTAARELA-----RKNIRVNVVLPGFIATPMTEAM---PPKVLDKILGMIP------MGRLG  223 (256)
T ss_pred             ----hhhhhhcCceeeeeHHHHHHHh-----hcCceEeEeccccccChhhhhc---CHHHHHHHHccCC------ccccC
Confidence                4588899999999999999988     6799999999999999975443   4566666666665      45667


Q ss_pred             cHHHHHHHHHhhhcCC
Q 023689          230 PVKDVAKAQVLLFESP  245 (278)
Q Consensus       230 ~~~D~a~~~~~~~~~~  245 (278)
                      ..+|+|..++++....
T Consensus       224 ~~EevA~~V~fLAS~~  239 (256)
T KOG1200|consen  224 EAEEVANLVLFLASDA  239 (256)
T ss_pred             CHHHHHHHHHHHhccc
Confidence            8999999999987443

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.87  E-value=6.6e-21  Score=158.97  Aligned_cols=226  Identities=18%  Similarity=0.121  Sum_probs=144.9

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCC----------Ccccc-cCCCCCCCceEEEEccCCChh
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD----------SSHLF-ALPGAGDANLRVFEADVLDSG   72 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~----------~~~~~-~~~~~~~~~v~~~~~Dl~d~~   72 (278)
                      |..+++|++|||||+++||++++++|++.|+ .|++..|+...          .+.+. .+...+ .++.++++|++|++
T Consensus         3 ~~~l~~k~~lITGgs~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~Dv~~~~   80 (305)
T PRK08303          3 MKPLRGKVALVAGATRGAGRGIAVELGAAGA-TVYVTGRSTRARRSEYDRPETIEETAELVTAAG-GRGIAVQVDHLVPE   80 (305)
T ss_pred             CcCCCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecccccccccccccchHHHHHHHHHhcC-CceEEEEcCCCCHH
Confidence            5567789999999999999999999999999 88888886421          11111 111111 25778999999999


Q ss_pred             hHHHHhc-------CccEEEEec-ccCC-----C---CCCCCchhhhhhhHHhHHHHHHHHHH----hcCCCEEEEecce
Q 023689           73 AVSRAVE-------GCKGVFHVA-SPCT-----L---EDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSI  132 (278)
Q Consensus        73 ~~~~~~~-------~~d~vi~~a-~~~~-----~---~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~v~~Ss~  132 (278)
                      +++++++       ++|++|||| +...     .   +...+++...+++|+.+...+.+++.    +.+-++||++||.
T Consensus        81 ~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~  160 (305)
T PRK08303         81 QVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDG  160 (305)
T ss_pred             HHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCc
Confidence            8887765       579999999 6421     1   11234567788899888877776663    3334689999985


Q ss_pred             eeeecCCCCCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHH
Q 023689          133 SAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAV  209 (278)
Q Consensus       133 ~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~  209 (278)
                      .+.......                 .....|+.+|.....+.+.++.+   +|+++++|.||.|-++............
T Consensus       161 ~~~~~~~~~-----------------~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~  223 (305)
T PRK08303        161 TAEYNATHY-----------------RLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTEEN  223 (305)
T ss_pred             cccccCcCC-----------------CCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccCccc
Confidence            543211100                 00145888998888887777764   4899999999999877421100000000


Q ss_pred             HHHHhhCCCCcccccccCcccHHHHHHHHHhhhcCCC---CCceEEe
Q 023689          210 LQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA---ASGRYLC  253 (278)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~---~~~~~~~  253 (278)
                      ........|.     ...+..++|+|.++++++....   ..|.++.
T Consensus       224 ~~~~~~~~p~-----~~~~~~peevA~~v~fL~s~~~~~~itG~~l~  265 (305)
T PRK08303        224 WRDALAKEPH-----FAISETPRYVGRAVAALAADPDVARWNGQSLS  265 (305)
T ss_pred             hhhhhccccc-----cccCCCHHHHHHHHHHHHcCcchhhcCCcEEE
Confidence            0000111110     1234578999999999987653   2455543

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.87  E-value=1.7e-20  Score=154.14  Aligned_cols=205  Identities=17%  Similarity=0.143  Sum_probs=136.6

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCC-CCCccc-ccCCCCCCCceEEEEccCCChhhH----HHHh-----
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG-SDSSHL-FALPGAGDANLRVFEADVLDSGAV----SRAV-----   78 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~-~~~~~~-~~~~~~~~~~v~~~~~Dl~d~~~~----~~~~-----   78 (278)
                      ++++||||+|+||++++++|+++|+ .|++..|+. +..+.+ ..+......++.++.+|++|.+++    .+++     
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~   80 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGY-RVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFR   80 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCC-eEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHH
Confidence            5799999999999999999999999 777765542 222221 122111112577889999998754    3332     


Q ss_pred             --cCccEEEEecccCCCCCC----C-----------CchhhhhhhHHhHHHHHHHHHHhcC----------CCEEEEecc
Q 023689           79 --EGCKGVFHVASPCTLEDP----V-----------DPEKELILPAVQGTLNVLEAAKRFG----------VRRVVVTSS  131 (278)
Q Consensus        79 --~~~d~vi~~a~~~~~~~~----~-----------~~~~~~~~~n~~~~~~ll~~~~~~~----------~~~~v~~Ss  131 (278)
                        .++|+||||||.......    .           ..+...+++|+.++..+++++.+..          ...++++||
T Consensus        81 ~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s  160 (267)
T TIGR02685        81 AFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCD  160 (267)
T ss_pred             ccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehh
Confidence              358999999986443111    1           1256789999999999888764321          235888877


Q ss_pred             eeeeecCCCCCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHH
Q 023689          132 ISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCA  208 (278)
Q Consensus       132 ~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~  208 (278)
                      ..+..+.+.                    ...|+.+|...+.+.+.++.+   .|+++++++||.+.++....     ..
T Consensus       161 ~~~~~~~~~--------------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~-----~~  215 (267)
T TIGR02685       161 AMTDQPLLG--------------------FTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMP-----FE  215 (267)
T ss_pred             hhccCCCcc--------------------cchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccc-----hh
Confidence            554322221                    257999999999999988766   59999999999987663221     11


Q ss_pred             HHHHHhhCCCCcccccccCcccHHHHHHHHHhhhcCC
Q 023689          209 VLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP  245 (278)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  245 (278)
                      .........+.     ...+..++|+++++++++...
T Consensus       216 ~~~~~~~~~~~-----~~~~~~~~~va~~~~~l~~~~  247 (267)
T TIGR02685       216 VQEDYRRKVPL-----GQREASAEQIADVVIFLVSPK  247 (267)
T ss_pred             HHHHHHHhCCC-----CcCCCCHHHHHHHHHHHhCcc
Confidence            11122111111     123568999999999998754

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.86  E-value=8.1e-21  Score=144.38  Aligned_cols=221  Identities=19%  Similarity=0.189  Sum_probs=163.3

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCC-CCCCceEEEEccCCChhhHHHHhc-----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPG-AGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~-~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      ++++|++++||+.|+||+.+.++|+++|. .+.++..+.+..+...++.. ..+..+.|+++|+++..+++++++     
T Consensus         2 ~~tGKna~vtggagGIGl~~sk~Ll~kgi-k~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~   80 (261)
T KOG4169|consen    2 DLTGKNALVTGGAGGIGLATSKALLEKGI-KVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILAT   80 (261)
T ss_pred             cccCceEEEecCCchhhHHHHHHHHHcCc-hheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHH
Confidence            56799999999999999999999999999 55555555544444444433 233489999999999988888876     


Q ss_pred             --CccEEEEecccCCCCCCCCchhhhhhhHH----hHHHHHHHHHHhcC---CCEEEEecceeeeecCCCCCCccccCCC
Q 023689           80 --GCKGVFHVASPCTLEDPVDPEKELILPAV----QGTLNVLEAAKRFG---VRRVVVTSSISAIVPNPGWKGKVFDETS  150 (278)
Q Consensus        80 --~~d~vi~~a~~~~~~~~~~~~~~~~~~n~----~~~~~ll~~~~~~~---~~~~v~~Ss~~~~~~~~~~~~~~~~E~~  150 (278)
                        .+|++||.||+..    .++|+..+.+|+    .+|...++++.+.+   .+-+|++||..+.++.+-.         
T Consensus        81 fg~iDIlINgAGi~~----dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~---------  147 (261)
T KOG4169|consen   81 FGTIDILINGAGILD----DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVF---------  147 (261)
T ss_pred             hCceEEEEccccccc----chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccc---------
Confidence              4699999999866    477999999995    56667788886542   4569999998888876654         


Q ss_pred             CCchhhhhccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCC------CCchhHHHHHHHhhCCCCccccc
Q 023689          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQP------YLNASCAVLQQLLQGSKDTQEYH  224 (278)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~  224 (278)
                         |.|++++++..++++.++...-   .+++|+++..++||.+-+.....      +...... +...+.         
T Consensus       148 ---pVY~AsKaGVvgFTRSla~~ay---y~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~-~~~~l~---------  211 (261)
T KOG4169|consen  148 ---PVYAASKAGVVGFTRSLADLAY---YQRSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDS-IKEALE---------  211 (261)
T ss_pred             ---hhhhhcccceeeeehhhhhhhh---HhhcCEEEEEECCCcchHHHHHHHHhcCCcccccHH-HHHHHH---------
Confidence               7799999999999999988543   34779999999999876542111      1111111 222222         


Q ss_pred             ccCcccHHHHHHHHHhhhcCCCCCceEEecCc
Q 023689          225 WLGAVPVKDVAKAQVLLFESPAASGRYLCTNG  256 (278)
Q Consensus       225 ~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~  256 (278)
                      +....+..+++..++.++|.+.++-+|+++.+
T Consensus       212 ~~~~q~~~~~a~~~v~aiE~~~NGaiw~v~~g  243 (261)
T KOG4169|consen  212 RAPKQSPACCAINIVNAIEYPKNGAIWKVDSG  243 (261)
T ss_pred             HcccCCHHHHHHHHHHHHhhccCCcEEEEecC
Confidence            22345789999999999999766557876644

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.86  E-value=1.9e-20  Score=154.35  Aligned_cols=230  Identities=19%  Similarity=0.159  Sum_probs=147.8

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc------Ccc
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE------GCK   82 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~------~~d   82 (278)
                      |+++|||+ |+||++++++|. +|+ .|++..|+.+..+... .+...+ .++.++++|++|++++.++++      ++|
T Consensus         3 k~~lItGa-~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id   78 (275)
T PRK06940          3 EVVVVIGA-GGIGQAIARRVG-AGK-KVLLADYNEENLEAAAKTLREAG-FDVSTQEVDVSSRESVKALAATAQTLGPVT   78 (275)
T ss_pred             CEEEEECC-ChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhcC-CeEEEEEeecCCHHHHHHHHHHHHhcCCCC
Confidence            67899998 699999999996 898 8888888654432221 121111 268889999999998888765      589


Q ss_pred             EEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhc--CCCEEEEecceeeeecCCCC--CCc---cccCCCCCchh
Q 023689           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGW--KGK---VFDETSWTDLE  155 (278)
Q Consensus        83 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~Ss~~~~~~~~~~--~~~---~~~E~~~~~~~  155 (278)
                      ++||+||....   ..+++..+++|+.++.++++++.+.  ..+++|++||.++.......  ...   .++..+.....
T Consensus        79 ~li~nAG~~~~---~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (275)
T PRK06940         79 GLVHTAGVSPS---QASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLP  155 (275)
T ss_pred             EEEECCCcCCc---hhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhccccccccccccccc
Confidence            99999997532   3568899999999999999988553  12457888887665432000  000   00111100000


Q ss_pred             h--h---hccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCC-chhHHHHHHHhhCCCCccccccc
Q 023689          156 Y--C---KSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYL-NASCAVLQQLLQGSKDTQEYHWL  226 (278)
Q Consensus       156 ~--~---~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  226 (278)
                      +  .   ......|+.||.+.+.+.+.++.+   +|++++++.||.+.++...... .........+....|      ..
T Consensus       156 ~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p------~~  229 (275)
T PRK06940        156 FLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKSP------AG  229 (275)
T ss_pred             cccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhhCC------cc
Confidence            0  0   012357999999999888877764   4899999999999988542211 001111122222222      23


Q ss_pred             CcccHHHHHHHHHhhhcCCC--CCceEE
Q 023689          227 GAVPVKDVAKAQVLLFESPA--ASGRYL  252 (278)
Q Consensus       227 ~~i~~~D~a~~~~~~~~~~~--~~~~~~  252 (278)
                      .+..++|+|+++.+++....  ..|..+
T Consensus       230 r~~~peeia~~~~fL~s~~~~~itG~~i  257 (275)
T PRK06940        230 RPGTPDEIAALAEFLMGPRGSFITGSDF  257 (275)
T ss_pred             cCCCHHHHHHHHHHHcCcccCcccCceE
Confidence            47899999999999886433  245433

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.86  E-value=1e-20  Score=174.20  Aligned_cols=200  Identities=17%  Similarity=0.191  Sum_probs=148.4

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      .+++|++|||||||+||++++++|.++|+ .|+++.|+++..+.+. .+.... .++.++.+|++|.++++++++     
T Consensus       368 ~~~~k~vlItGas~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~~~~~~~~~~~~  445 (657)
T PRK07201        368 PLVGKVVLITGASSGIGRATAIKVAEAGA-TVFLVARNGEALDELVAEIRAKG-GTAHAYTCDLTDSAAVDHTVKDILAE  445 (657)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHHHHHHh
Confidence            34578999999999999999999999999 8999988765433321 111111 278899999999999888876     


Q ss_pred             --CccEEEEecccCCCCC---C---CCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCcccc
Q 023689           80 --GCKGVFHVASPCTLED---P---VDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFD  147 (278)
Q Consensus        80 --~~d~vi~~a~~~~~~~---~---~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~  147 (278)
                        ++|++||+||......   .   .++++..+++|+.++.++++++    ++.+.++||++||.+++.+.+..      
T Consensus       446 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~------  519 (657)
T PRK07201        446 HGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPRF------  519 (657)
T ss_pred             cCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCc------
Confidence              5899999999643211   1   1356788999999988776654    55667899999997765443321      


Q ss_pred             CCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccc
Q 023689          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (278)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (278)
                                    +.|+.+|.+.+.+.+.++.+   +|+++++++||.|.++.......         .         .
T Consensus       520 --------------~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~~---------~---------~  567 (657)
T PRK07201        520 --------------SAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPTKR---------Y---------N  567 (657)
T ss_pred             --------------chHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcccc---------c---------c
Confidence                          57999999999998887764   48999999999999886432200         0         0


Q ss_pred             ccCcccHHHHHHHHHhhhcCC
Q 023689          225 WLGAVPVKDVAKAQVLLFESP  245 (278)
Q Consensus       225 ~~~~i~~~D~a~~~~~~~~~~  245 (278)
                      ....++++++|+.++..+.+.
T Consensus       568 ~~~~~~~~~~a~~i~~~~~~~  588 (657)
T PRK07201        568 NVPTISPEEAADMVVRAIVEK  588 (657)
T ss_pred             CCCCCCHHHHHHHHHHHHHhC
Confidence            123578999999999887653

>PRK05599 hypothetical protein; Provisional

Probab=99.86  E-value=6.7e-20  Score=148.70  Aligned_cols=203  Identities=15%  Similarity=0.082  Sum_probs=141.0

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc-------Cc
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~   81 (278)
                      |++|||||+++||++++++|. +|+ .|++..|+.+..+.+. .+.......+.++.+|++|+++++++++       ++
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   78 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGE-DVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEI   78 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCC
Confidence            579999999999999999998 598 8888888765443332 2222122247889999999998887764       57


Q ss_pred             cEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHH----HHHhcC-CCEEEEecceeeeecCCCCCCccccCCCCC
Q 023689           82 KGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLE----AAKRFG-VRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (278)
Q Consensus        82 d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~----~~~~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~  152 (278)
                      |++||+||.....    .....+.+.+++|+.+...+++    .+++++ -+++|++||..+..+.++.           
T Consensus        79 d~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~-----------  147 (246)
T PRK05599         79 SLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRAN-----------  147 (246)
T ss_pred             CEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcCC-----------
Confidence            9999999875431    1122334566778777765544    444443 4689999997775443321           


Q ss_pred             chhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcc
Q 023689          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (278)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  229 (278)
                               ..|+.+|...+.+.+.++.+   .|++++++.||.+.++......              +.      .-..
T Consensus       148 ---------~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~~--------------~~------~~~~  198 (246)
T PRK05599        148 ---------YVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTTGMK--------------PA------PMSV  198 (246)
T ss_pred             ---------cchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhcCCC--------------CC------CCCC
Confidence                     46999999988888887765   4899999999999887532110              00      0125


Q ss_pred             cHHHHHHHHHhhhcCCCCCceEEec
Q 023689          230 PVKDVAKAQVLLFESPAASGRYLCT  254 (278)
Q Consensus       230 ~~~D~a~~~~~~~~~~~~~~~~~~~  254 (278)
                      .++|+|++++.++.+......+...
T Consensus       199 ~pe~~a~~~~~~~~~~~~~~~~~~~  223 (246)
T PRK05599        199 YPRDVAAAVVSAITSSKRSTTLWIP  223 (246)
T ss_pred             CHHHHHHHHHHHHhcCCCCceEEeC
Confidence            7899999999999876543344443

>PRK05855 short chain dehydrogenase; Validated

Probab=99.86  E-value=1.6e-20  Score=170.61  Aligned_cols=214  Identities=18%  Similarity=0.091  Sum_probs=150.4

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      ..+++++|||||+|+||++++++|.++|+ .|++..|+.+..+.+.. +...+. ++.++.+|++|++++.++++     
T Consensus       312 ~~~~~~~lv~G~s~giG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~~~~~~~~~~~~  389 (582)
T PRK05855        312 PFSGKLVVVTGAGSGIGRETALAFAREGA-EVVASDIDEAAAERTAELIRAAGA-VAHAYRVDVSDADAMEAFAEWVRAE  389 (582)
T ss_pred             cCCCCEEEEECCcCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHHHHHHHHHh
Confidence            34568999999999999999999999999 78888887654333221 111122 68899999999999888775     


Q ss_pred             --CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHH----HhcC-CCEEEEecceeeeecCCCCCCccccC
Q 023689           80 --GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFG-VRRVVVTSSISAIVPNPGWKGKVFDE  148 (278)
Q Consensus        80 --~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~----~~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~E  148 (278)
                        .+|++|||||.....    ...++++..+++|+.|+.++++++    ++++ .++||++||.+++.+.++.       
T Consensus       390 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~-------  462 (582)
T PRK05855        390 HGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSL-------  462 (582)
T ss_pred             cCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCC-------
Confidence              479999999975432    233466788999999998888765    3333 3689999998776544332       


Q ss_pred             CCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCC--chh---HHHHHHHhhCCCCc
Q 023689          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYL--NAS---CAVLQQLLQGSKDT  220 (278)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~--~~~---~~~~~~~~~~~~~~  220 (278)
                                   ..|+.+|.+.+.+.+.++.+   +|+++++++||.|-++......  ...   ...........   
T Consensus       463 -------------~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~---  526 (582)
T PRK05855        463 -------------PAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKL---  526 (582)
T ss_pred             -------------cHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhhh---
Confidence                         57999999999888877754   4899999999999887543321  000   00000000000   


Q ss_pred             ccccccCcccHHHHHHHHHhhhcCCCC
Q 023689          221 QEYHWLGAVPVKDVAKAQVLLFESPAA  247 (278)
Q Consensus       221 ~~~~~~~~i~~~D~a~~~~~~~~~~~~  247 (278)
                         .......++|+|++++.++.++..
T Consensus       527 ---~~~~~~~p~~va~~~~~~~~~~~~  550 (582)
T PRK05855        527 ---YQRRGYGPEKVAKAIVDAVKRNKA  550 (582)
T ss_pred             ---ccccCCCHHHHHHHHHHHHHcCCC
Confidence               011235789999999999987543

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.86  E-value=4.8e-20  Score=148.98  Aligned_cols=190  Identities=13%  Similarity=0.072  Sum_probs=131.5

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      ++++|+++||||+|+||++++++|+++|+ .|++..|+....... .. . .  ...++.+|++|.+++.+.+.++|++|
T Consensus        11 ~l~~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~~~~~~~-~~-~-~--~~~~~~~D~~~~~~~~~~~~~iDilV   84 (245)
T PRK12367         11 TWQGKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSKINNSES-ND-E-S--PNEWIKWECGKEESLDKQLASLDVLI   84 (245)
T ss_pred             hhCCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCchhhhhh-hc-c-C--CCeEEEeeCCCHHHHHHhcCCCCEEE
Confidence            55678999999999999999999999999 888888865221111 10 0 1  23578899999999999999999999


Q ss_pred             EecccCCC-CCCCCchhhhhhhHHhHHHHHHHHHHhc-------CCCEEEEecceeeeecCCCCCCccccCCCCCchhhh
Q 023689           86 HVASPCTL-EDPVDPEKELILPAVQGTLNVLEAAKRF-------GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYC  157 (278)
Q Consensus        86 ~~a~~~~~-~~~~~~~~~~~~~n~~~~~~ll~~~~~~-------~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~  157 (278)
                      ||||.... ....++++..+++|+.++.++++++.+.       +.+.++..||.++..+ +.                 
T Consensus        85 nnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~-~~-----------------  146 (245)
T PRK12367         85 LNHGINPGGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP-AL-----------------  146 (245)
T ss_pred             ECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC-CC-----------------
Confidence            99987443 2234577889999999999999877432       1223444454333211 11                 


Q ss_pred             hccCchhhhHHHHHHHHH---HHHH---HhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccH
Q 023689          158 KSRKKWYPVSKTLAEKAA---WEFA---EKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPV  231 (278)
Q Consensus       158 ~~~~~~y~~sK~~~e~~~---~~~~---~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  231 (278)
                         ...|+.||.+.+.+.   .+++   .+.++.+..+.||.+.++..                  +       ...+.+
T Consensus       147 ---~~~Y~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~------------------~-------~~~~~~  198 (245)
T PRK12367        147 ---SPSYEISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSELN------------------P-------IGIMSA  198 (245)
T ss_pred             ---CchhHHHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCcccccC------------------c-------cCCCCH
Confidence               146999999875432   2221   14588888999887654421                  0       124689


Q ss_pred             HHHHHHHHhhhcCCCC
Q 023689          232 KDVAKAQVLLFESPAA  247 (278)
Q Consensus       232 ~D~a~~~~~~~~~~~~  247 (278)
                      +|+|+.++.++.+...
T Consensus       199 ~~vA~~i~~~~~~~~~  214 (245)
T PRK12367        199 DFVAKQILDQANLGLY  214 (245)
T ss_pred             HHHHHHHHHHHhcCCc
Confidence            9999999999876543

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.85  E-value=1.6e-20  Score=151.71  Aligned_cols=205  Identities=19%  Similarity=0.208  Sum_probs=144.0

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      ++++|+||||||+|+||+++++.|.++|+ .|++..|+++....+. .... .. +++++++|++|++++.++++     
T Consensus         2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~-~~-~~~~~~~Dl~~~~~~~~~~~~~~~~   78 (238)
T PRK05786          2 RLKGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRMKKTLSK-YG-NIHYVVGDVSSTESARNVIEKAAKV   78 (238)
T ss_pred             CcCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHh-cC-CeEEEECCCCCHHHHHHHHHHHHHH
Confidence            35678999999999999999999999999 8999999765443331 1111 11 68899999999998887664     


Q ss_pred             --CccEEEEecccCCCCC--CCCchhhhhhhHHhHHHHHHHHHHhc--CCCEEEEecceeeeecCCCCCCccccCCCCCc
Q 023689           80 --GCKGVFHVASPCTLED--PVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (278)
Q Consensus        80 --~~d~vi~~a~~~~~~~--~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~  153 (278)
                        ++|.++|+++......  ..+.++..++.|+.+...+++.+.+.  ..+++|++||..+.+...              
T Consensus        79 ~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~--------------  144 (238)
T PRK05786         79 LNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKAS--------------  144 (238)
T ss_pred             hCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcccCC--------------
Confidence              3699999998543211  11345677899999888888777543  235799999865532110              


Q ss_pred             hhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCccc
Q 023689          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP  230 (278)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  230 (278)
                           .....|+.+|...+.+.+.++.+   .+++++++||+.++++.....     . ....        ......+++
T Consensus       145 -----~~~~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~-----~-~~~~--------~~~~~~~~~  205 (238)
T PRK05786        145 -----PDQLSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPER-----N-WKKL--------RKLGDDMAP  205 (238)
T ss_pred             -----CCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCchh-----h-hhhh--------ccccCCCCC
Confidence                 01146999999999888887765   399999999999999753211     0 0010        001123578


Q ss_pred             HHHHHHHHHhhhcCCC
Q 023689          231 VKDVAKAQVLLFESPA  246 (278)
Q Consensus       231 ~~D~a~~~~~~~~~~~  246 (278)
                      .+|+++.+++++....
T Consensus       206 ~~~va~~~~~~~~~~~  221 (238)
T PRK05786        206 PEDFAKVIIWLLTDEA  221 (238)
T ss_pred             HHHHHHHHHHHhcccc
Confidence            8999999999986533

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.85  E-value=2.4e-20  Score=156.59  Aligned_cols=196  Identities=17%  Similarity=0.122  Sum_probs=139.5

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCC-CCCceEEEEccCCC--hhhHH---HHhcC
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGA-GDANLRVFEADVLD--SGAVS---RAVEG   80 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~-~~~~v~~~~~Dl~d--~~~~~---~~~~~   80 (278)
                      .+++++||||||+||++++++|.++|+ +|++..|+++..+.+. ++... ...++..+.+|+++  .+.+.   +.+.+
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~  130 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGL-NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEG  130 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcC
Confidence            478999999999999999999999999 8888998776543322 11111 11267788899985  23333   33343


Q ss_pred             --ccEEEEecccCCC------CCCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeec--CCCCCCccc
Q 023689           81 --CKGVFHVASPCTL------EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVP--NPGWKGKVF  146 (278)
Q Consensus        81 --~d~vi~~a~~~~~------~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~--~~~~~~~~~  146 (278)
                        +|++|||||....      +...++++..+++|+.++..+.+++    .+++.+++|++||.+++..  .+.      
T Consensus       131 ~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~p~------  204 (320)
T PLN02780        131 LDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPL------  204 (320)
T ss_pred             CCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCcc------
Confidence              5699999997532      1223456778999999988888776    3456678999999776531  121      


Q ss_pred             cCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccc
Q 023689          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (278)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (278)
                                    .+.|+.||...+.+.+.++.+   +|+++++++||.+-++.....             ..      
T Consensus       205 --------------~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~~-------------~~------  251 (320)
T PLN02780        205 --------------YAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASIR-------------RS------  251 (320)
T ss_pred             --------------chHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCccccc-------------CC------
Confidence                          157999999999888888765   489999999999988753210             00      


Q ss_pred             cccCcccHHHHHHHHHhhhcC
Q 023689          224 HWLGAVPVKDVAKAQVLLFES  244 (278)
Q Consensus       224 ~~~~~i~~~D~a~~~~~~~~~  244 (278)
                       .....+++++|+.++..+..
T Consensus       252 -~~~~~~p~~~A~~~~~~~~~  271 (320)
T PLN02780        252 -SFLVPSSDGYARAALRWVGY  271 (320)
T ss_pred             -CCCCCCHHHHHHHHHHHhCC
Confidence             11135889999999999864

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.85  E-value=4.4e-20  Score=147.50  Aligned_cols=185  Identities=12%  Similarity=0.113  Sum_probs=135.4

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc----CccEEE
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----GCKGVF   85 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~----~~d~vi   85 (278)
                      |+++||||+|+||+++++.|.++|+ .|++..|+.+..+.....     .+++++++|++|++++.++++    ++|++|
T Consensus         1 m~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv   74 (223)
T PRK05884          1 VEVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKE-----LDVDAIVCDNTDPASLEEARGLFPHHLDTIV   74 (223)
T ss_pred             CeEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHh-----ccCcEEecCCCCHHHHHHHHHHHhhcCcEEE
Confidence            3799999999999999999999999 888888876543322210     046788999999999888775    589999


Q ss_pred             EecccCCC---------CCCCCchhhhhhhHHhHHHHHHHHHHhc--CCCEEEEecceeeeecCCCCCCccccCCCCCch
Q 023689           86 HVASPCTL---------EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDL  154 (278)
Q Consensus        86 ~~a~~~~~---------~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~  154 (278)
                      |+|+....         ....+.++..+++|+.++.++++++...  ..+++|++||..    .+.              
T Consensus        75 ~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~----~~~--------------  136 (223)
T PRK05884         75 NVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPEN----PPA--------------  136 (223)
T ss_pred             ECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCC----CCC--------------
Confidence            99974211         0123467889999999999999987542  236899999844    111              


Q ss_pred             hhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccH
Q 023689          155 EYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPV  231 (278)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  231 (278)
                            ...|+.+|...+.+.+.++.+   +|++++++.||.+.++...           .. ...|         ...+
T Consensus       137 ------~~~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~-----------~~-~~~p---------~~~~  189 (223)
T PRK05884        137 ------GSAEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPGYD-----------GL-SRTP---------PPVA  189 (223)
T ss_pred             ------ccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchhhh-----------hc-cCCC---------CCCH
Confidence                  146888998888888877764   5899999999998765311           00 0111         1278


Q ss_pred             HHHHHHHHhhhcCC
Q 023689          232 KDVAKAQVLLFESP  245 (278)
Q Consensus       232 ~D~a~~~~~~~~~~  245 (278)
                      +|+++.+.+++...
T Consensus       190 ~~ia~~~~~l~s~~  203 (223)
T PRK05884        190 AEIARLALFLTTPA  203 (223)
T ss_pred             HHHHHHHHHHcCch
Confidence            99999999987653

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.85  E-value=1.3e-20  Score=151.75  Aligned_cols=217  Identities=25%  Similarity=0.326  Sum_probs=147.0

Q ss_pred             EEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCC--CcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEecc
Q 023689           12 VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD--SSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (278)
Q Consensus        12 vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~--~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a~   89 (278)
                      |+|+||||.+|+++++.|++.++ .|.++.|+...  ...+...      +++.+.+|+.|++++.++++++|+||.+.+
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~-~V~~l~R~~~~~~~~~l~~~------g~~vv~~d~~~~~~l~~al~g~d~v~~~~~   73 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGF-SVRALVRDPSSDRAQQLQAL------GAEVVEADYDDPESLVAALKGVDAVFSVTP   73 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTG-CEEEEESSSHHHHHHHHHHT------TTEEEES-TT-HHHHHHHHTTCSEEEEESS
T ss_pred             CEEECCccHHHHHHHHHHHhCCC-CcEEEEeccchhhhhhhhcc------cceEeecccCCHHHHHHHHcCCceEEeecC
Confidence            79999999999999999999998 99999998733  2222222      778899999999999999999999998865


Q ss_pred             cCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhhHHH
Q 023689           90 PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKT  169 (278)
Q Consensus        90 ~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~  169 (278)
                      ...            ..-.....+++++|++.|+++||+ ||....+...          ....|.      ...-..|.
T Consensus        74 ~~~------------~~~~~~~~~li~Aa~~agVk~~v~-ss~~~~~~~~----------~~~~p~------~~~~~~k~  124 (233)
T PF05368_consen   74 PSH------------PSELEQQKNLIDAAKAAGVKHFVP-SSFGADYDES----------SGSEPE------IPHFDQKA  124 (233)
T ss_dssp             CSC------------CCHHHHHHHHHHHHHHHT-SEEEE-SEESSGTTTT----------TTSTTH------HHHHHHHH
T ss_pred             cch------------hhhhhhhhhHHHhhhccccceEEE-EEeccccccc----------cccccc------chhhhhhh
Confidence            432            112444678999999999999986 5533322111          000111      22445777


Q ss_pred             HHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCC-CCcc---cccccCc-ccHHHHHHHHHhhhcC
Q 023689          170 LAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGS-KDTQ---EYHWLGA-VPVKDVAKAQVLLFES  244 (278)
Q Consensus       170 ~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~-i~~~D~a~~~~~~~~~  244 (278)
                      ..|+.++    +.+++++++|||..+.........     ........ ...+   ++....+ ++.+|++++++.++.+
T Consensus       125 ~ie~~l~----~~~i~~t~i~~g~f~e~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~  195 (233)
T PF05368_consen  125 EIEEYLR----ESGIPYTIIRPGFFMENLLPPFAP-----VVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLD  195 (233)
T ss_dssp             HHHHHHH----HCTSEBEEEEE-EEHHHHHTTTHH-----TTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHS
T ss_pred             hhhhhhh----hccccceeccccchhhhhhhhhcc-----cccccccceEEEEccCCCccccccccHHHHHHHHHHHHcC
Confidence            7787775    569999999999876554222100     00000110 0111   1234555 4999999999999998


Q ss_pred             CCCC--ce-EEecCccccHHHHHHHHHHhCCC
Q 023689          245 PAAS--GR-YLCTNGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       245 ~~~~--~~-~~~~~~~~s~~e~~~~i~~~~~~  273 (278)
                      +...  +. +.+.++.+|+.|+++.+.+.+++
T Consensus       196 p~~~~~~~~~~~~~~~~t~~eia~~~s~~~G~  227 (233)
T PF05368_consen  196 PEKHNNGKTIFLAGETLTYNEIAAILSKVLGK  227 (233)
T ss_dssp             GGGTTEEEEEEEGGGEEEHHHHHHHHHHHHTS
T ss_pred             hHHhcCCEEEEeCCCCCCHHHHHHHHHHHHCC
Confidence            7654  44 45667889999999999998864

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.2e-19  Score=145.27  Aligned_cols=191  Identities=19%  Similarity=0.213  Sum_probs=139.2

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc-----CccE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----GCKG   83 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----~~d~   83 (278)
                      ||+++||||+|+||++++++|.++|+ .|+++.|++...+.+...     .++.++.+|++|++++.++++     ++|+
T Consensus         1 ~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~-----~~~~~~~~D~~d~~~~~~~~~~~~~~~id~   74 (225)
T PRK08177          1 KRTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTALQAL-----PGVHIEKLDMNDPASLDQLLQRLQGQRFDL   74 (225)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHHHhc-----cccceEEcCCCCHHHHHHHHHHhhcCCCCE
Confidence            47899999999999999999999999 899999987654433322     167788899999988888776     5899


Q ss_pred             EEEecccCCC------CCCCCchhhhhhhHHhHHHHHHHHHHhc---CCCEEEEecceeeeecCCCCCCccccCCCCCch
Q 023689           84 VFHVASPCTL------EDPVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDL  154 (278)
Q Consensus        84 vi~~a~~~~~------~~~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~  154 (278)
                      |||+||....      +...+++...+++|+.++..+++++...   +...++++||..+..+...              
T Consensus        75 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~~~~~~--------------  140 (225)
T PRK08177         75 LFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGSVELPD--------------  140 (225)
T ss_pred             EEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCccccccCC--------------
Confidence            9999987532      1123456778899999999888887543   3357888887543321110              


Q ss_pred             hhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccH
Q 023689          155 EYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPV  231 (278)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  231 (278)
                         ......|+.+|.+.+.+++.++++   ++++++.++||.+-++.....                        ..++.
T Consensus       141 ---~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~~~~~------------------------~~~~~  193 (225)
T PRK08177        141 ---GGEMPLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDMGGDN------------------------APLDV  193 (225)
T ss_pred             ---CCCccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecCCCCCC------------------------CCCCH
Confidence               011246999999999999988765   479999999999988763221                        01355


Q ss_pred             HHHHHHHHhhhcCCC
Q 023689          232 KDVAKAQVLLFESPA  246 (278)
Q Consensus       232 ~D~a~~~~~~~~~~~  246 (278)
                      ...++.++..+++..
T Consensus       194 ~~~~~~~~~~~~~~~  208 (225)
T PRK08177        194 ETSVKGLVEQIEAAS  208 (225)
T ss_pred             HHHHHHHHHHHHhCC
Confidence            666677777776654

>PRK06484 short chain dehydrogenase; Validated

Probab=99.85  E-value=6.4e-20  Score=164.49  Aligned_cols=209  Identities=17%  Similarity=0.134  Sum_probs=148.9

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc------
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~------   79 (278)
                      +.++|++|||||+++||.+++++|.++|+ .|++..|+.+..+.+..-.  + .++.++++|++|+++++++++      
T Consensus         2 ~~~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~--~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (520)
T PRK06484          2 KAQSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVERARERADSL--G-PDHHALAMDVSDEAQIREGFEQLHREF   77 (520)
T ss_pred             CCCCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh--C-CceeEEEeccCCHHHHHHHHHHHHHHh
Confidence            34678999999999999999999999999 8888888765433322211  1 167889999999998888765      


Q ss_pred             -CccEEEEecccCCC------CCCCCchhhhhhhHHhHHHHHHHHHHhc----CCC-EEEEecceeeeecCCCCCCcccc
Q 023689           80 -GCKGVFHVASPCTL------EDPVDPEKELILPAVQGTLNVLEAAKRF----GVR-RVVVTSSISAIVPNPGWKGKVFD  147 (278)
Q Consensus        80 -~~d~vi~~a~~~~~------~~~~~~~~~~~~~n~~~~~~ll~~~~~~----~~~-~~v~~Ss~~~~~~~~~~~~~~~~  147 (278)
                       ++|++||+||....      +...++++..+++|+.++..+++++...    +.+ ++|++||..+..+.++.      
T Consensus        78 g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~~------  151 (520)
T PRK06484         78 GRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKR------  151 (520)
T ss_pred             CCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCCC------
Confidence             47999999986321      2234567889999999999888877442    333 89999998776554332      


Q ss_pred             CCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccc
Q 023689          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (278)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (278)
                                    ..|+.+|...+.+.+.++.+   .++++++++||.+.++....................+      
T Consensus       152 --------------~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~------  211 (520)
T PRK06484        152 --------------TAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRIP------  211 (520)
T ss_pred             --------------chHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhcCC------
Confidence                          57999999999988887765   4899999999999877533211000000011111111      


Q ss_pred             ccCcccHHHHHHHHHhhhcC
Q 023689          225 WLGAVPVKDVAKAQVLLFES  244 (278)
Q Consensus       225 ~~~~i~~~D~a~~~~~~~~~  244 (278)
                      ...+..++|+|+++.+++..
T Consensus       212 ~~~~~~~~~va~~v~~l~~~  231 (520)
T PRK06484        212 LGRLGRPEEIAEAVFFLASD  231 (520)
T ss_pred             CCCCcCHHHHHHHHHHHhCc
Confidence            22356889999999988764

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=99.84  E-value=3.3e-20  Score=142.62  Aligned_cols=250  Identities=16%  Similarity=0.164  Sum_probs=182.2

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCC-----cccccCC-CCCCCceEEEEccCCChhhHHHHhc--Cc
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-----SHLFALP-GAGDANLRVFEADVLDSGAVSRAVE--GC   81 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~-----~~~~~~~-~~~~~~v~~~~~Dl~d~~~~~~~~~--~~   81 (278)
                      |..||||-||.=|++|++.|+.+|+ +|.++.|+.+.-     +.+..-+ ......+....+|++|...+.+++.  ++
T Consensus        29 kvALITGItGQDGSYLaEfLL~KgY-eVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ikP  107 (376)
T KOG1372|consen   29 KVALITGITGQDGSYLAEFLLSKGY-EVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIKP  107 (376)
T ss_pred             eEEEEecccCCCchHHHHHHHhCCc-eeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccCc
Confidence            5789999999999999999999999 999998865542     2221111 1122378899999999999999987  56


Q ss_pred             cEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCC---CEEEEecceeeeecCCCCCCccccCCCCCchhhhh
Q 023689           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV---RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCK  158 (278)
Q Consensus        82 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~---~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~  158 (278)
                      +-|+|+|+..+...+.+-++..-++...|+..|+++.+..+.   -+|--.| ++..|+...  ..|..|.+|..|.   
T Consensus       108 tEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAs-tSElyGkv~--e~PQsE~TPFyPR---  181 (376)
T KOG1372|consen  108 TEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQAS-TSELYGKVQ--EIPQSETTPFYPR---  181 (376)
T ss_pred             hhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecc-cHhhccccc--CCCcccCCCCCCC---
Confidence            899999999888777788888899999999999999988742   2455545 477776443  4778888887775   


Q ss_pred             ccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeC---CCCCCC--CchhHHHHHHHhhCCCCcc--cc--cccCcc
Q 023689          159 SRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLG---PLMQPY--LNASCAVLQQLLQGSKDTQ--EY--HWLGAV  229 (278)
Q Consensus       159 ~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g---~~~~~~--~~~~~~~~~~~~~~~~~~~--~~--~~~~~i  229 (278)
                         ++|+.+|..+..++..|.+.+++=.+   -|..|-   |.+...  ...+..-+.++..|+...+  ++  ..+||-
T Consensus       182 ---SPYa~aKmy~~WivvNyREAYnmfAc---NGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWG  255 (376)
T KOG1372|consen  182 ---SPYAAAKMYGYWIVVNYREAYNMFAC---NGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRDWG  255 (376)
T ss_pred             ---ChhHHhhhhheEEEEEhHHhhcceee---ccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhcccc
Confidence               79999999999888888777765322   333343   332221  1122222333333433222  33  789999


Q ss_pred             cHHHHHHHHHhhhcCCCCCceEEecCccccHHHHHHHHHHhCC
Q 023689          230 PVKDVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFP  272 (278)
Q Consensus       230 ~~~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~~  272 (278)
                      |+.|-+++++..+.+..+....+..++..|++|+++.--...+
T Consensus       256 hA~dYVEAMW~mLQ~d~PdDfViATge~hsVrEF~~~aF~~ig  298 (376)
T KOG1372|consen  256 HAGDYVEAMWLMLQQDSPDDFVIATGEQHSVREFCNLAFAEIG  298 (376)
T ss_pred             hhHHHHHHHHHHHhcCCCCceEEecCCcccHHHHHHHHHHhhC
Confidence            9999999999999887765555778999999999987655543

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.84  E-value=1.3e-19  Score=144.25  Aligned_cols=208  Identities=13%  Similarity=0.094  Sum_probs=147.0

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccc-ccCCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL-FALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~-~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      +.++++||||||++++|+.++.++.++|. .+++.+.+.+..... +..... . +++.+.+|++|++++.+..+     
T Consensus        35 ~v~g~~vLITGgg~GlGr~ialefa~rg~-~~vl~Din~~~~~etv~~~~~~-g-~~~~y~cdis~~eei~~~a~~Vk~e  111 (300)
T KOG1201|consen   35 SVSGEIVLITGGGSGLGRLIALEFAKRGA-KLVLWDINKQGNEETVKEIRKI-G-EAKAYTCDISDREEIYRLAKKVKKE  111 (300)
T ss_pred             hccCCEEEEeCCCchHHHHHHHHHHHhCC-eEEEEeccccchHHHHHHHHhc-C-ceeEEEecCCCHHHHHHHHHHHHHh
Confidence            45688999999999999999999999999 888888776654333 222221 1 79999999999998887765     


Q ss_pred             --CccEEEEecccCCC----CCCCCchhhhhhhHHhHHH----HHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCC
Q 023689           80 --GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTL----NVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (278)
Q Consensus        80 --~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~----~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~  149 (278)
                        .+|++|||||+...    +...+..+..+++|+.+..    +++..+.+.+-+++|.++|.++..+.++.        
T Consensus       112 ~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~gl--------  183 (300)
T KOG1201|consen  112 VGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAGL--------  183 (300)
T ss_pred             cCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCccc--------
Confidence              57999999998665    3334456888999987655    46666677667899999999998776664        


Q ss_pred             CCCchhhhhccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcc
Q 023689          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (278)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  229 (278)
                          ..|+++|.+.-|.-+.+.+++...  ...|++.+.+.|+.+-+..-...            ...+     ...+.+
T Consensus       184 ----~~YcaSK~a~vGfhesL~~EL~~~--~~~~IktTlv~P~~i~Tgmf~~~------------~~~~-----~l~P~L  240 (300)
T KOG1201|consen  184 ----ADYCASKFAAVGFHESLSMELRAL--GKDGIKTTLVCPYFINTGMFDGA------------TPFP-----TLAPLL  240 (300)
T ss_pred             ----hhhhhhHHHHHHHHHHHHHHHHhc--CCCCeeEEEEeeeeccccccCCC------------CCCc-----cccCCC
Confidence                224444444444444443333211  12379999999998875431110            1111     267789


Q ss_pred             cHHHHHHHHHhhhcCCCC
Q 023689          230 PVKDVAKAQVLLFESPAA  247 (278)
Q Consensus       230 ~~~D~a~~~~~~~~~~~~  247 (278)
                      .++.+|+.++.++.....
T Consensus       241 ~p~~va~~Iv~ai~~n~~  258 (300)
T KOG1201|consen  241 EPEYVAKRIVEAILTNQA  258 (300)
T ss_pred             CHHHHHHHHHHHHHcCCc
Confidence            999999999999887554

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.84  E-value=2.2e-19  Score=150.66  Aligned_cols=236  Identities=14%  Similarity=0.094  Sum_probs=147.7

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCC-CCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc-------
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNN-YTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g-~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------   79 (278)
                      +|++|||||+++||.+++++|.++| + .|++..|+.+..+.+. .+.. ....+.++.+|++|.++++++++       
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~G~~-~V~l~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   80 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAATGEW-HVIMACRDFLKAEQAAKSLGM-PKDSYTIMHLDLGSLDSVRQFVQQFRESGR   80 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCC-EEEEEeCCHHHHHHHHHHhcC-CCCeEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            4799999999999999999999999 8 8888888665433222 2211 11267889999999998887764       


Q ss_pred             CccEEEEecccCCCC-----CCCCchhhhhhhHHhHHHHHHHHH----HhcC--CCEEEEecceeeeecCCCC-CCcccc
Q 023689           80 GCKGVFHVASPCTLE-----DPVDPEKELILPAVQGTLNVLEAA----KRFG--VRRVVVTSSISAIVPNPGW-KGKVFD  147 (278)
Q Consensus        80 ~~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~ll~~~----~~~~--~~~~v~~Ss~~~~~~~~~~-~~~~~~  147 (278)
                      ++|++||+||.....     ...+.++..+++|+.++..+++++    ++.+  .++||++||..+....... ...+.+
T Consensus        81 ~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~  160 (314)
T TIGR01289        81 PLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKAN  160 (314)
T ss_pred             CCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCccc
Confidence            489999999974321     123456788999999887776654    4432  4699999997765321100 000000


Q ss_pred             CCC-------CCch-----hhhhccCchhhhHHHHHHHHHHHHHHh----cCCceEEEecceee-CCCCCCCCchhHHHH
Q 023689          148 ETS-------WTDL-----EYCKSRKKWYPVSKTLAEKAAWEFAEK----HGVDVVAIHPATCL-GPLMQPYLNASCAVL  210 (278)
Q Consensus       148 E~~-------~~~~-----~~~~~~~~~y~~sK~~~e~~~~~~~~~----~~~~~~~lrp~~i~-g~~~~~~~~~~~~~~  210 (278)
                      ..+       +..+     .....+...|+.||.+...+.+.++++    .|+.+++++||.|. ++...........+.
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~~~~~~  240 (314)
T TIGR01289       161 LGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPLFRTLF  240 (314)
T ss_pred             ccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHHHHHHH
Confidence            000       0000     000012246999999988888877764    47999999999995 554332211111111


Q ss_pred             HHHhhCCCCcccccccCcccHHHHHHHHHhhhcCCC--CCceEEe
Q 023689          211 QQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLC  253 (278)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~  253 (278)
                      .......       ...+.++++.|+.++.++....  ..|.|+.
T Consensus       241 ~~~~~~~-------~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~  278 (314)
T TIGR01289       241 PPFQKYI-------TKGYVSEEEAGERLAQVVSDPKLKKSGVYWS  278 (314)
T ss_pred             HHHHHHH-------hccccchhhhhhhhHHhhcCcccCCCceeee
Confidence            1110000       1124688999999988876543  3466653

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.83  E-value=2.2e-19  Score=158.14  Aligned_cols=205  Identities=20%  Similarity=0.139  Sum_probs=143.5

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc-------
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------   79 (278)
                      ++++++|||||+|+||..+++.|.++|+ +|+++.++... +.+..+....  +..++.+|++|++++.++++       
T Consensus       208 ~~g~~vlItGasggIG~~la~~l~~~Ga-~vi~~~~~~~~-~~l~~~~~~~--~~~~~~~Dv~~~~~~~~~~~~~~~~~g  283 (450)
T PRK08261        208 LAGKVALVTGAARGIGAAIAEVLARDGA-HVVCLDVPAAG-EALAAVANRV--GGTALALDITAPDAPARIAEHLAERHG  283 (450)
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCccH-HHHHHHHHHc--CCeEEEEeCCCHHHHHHHHHHHHHhCC
Confidence            4578999999999999999999999999 78888774322 1111110000  34678899999998887765       


Q ss_pred             CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHhcC----CCEEEEecceeeeecCCCCCCccccCCCC
Q 023689           80 GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRFG----VRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (278)
Q Consensus        80 ~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~~----~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~  151 (278)
                      ++|+|||+||.....    ...+.++..+++|+.++.++.+++....    .++||++||.+++.+.++.          
T Consensus       284 ~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~~----------  353 (450)
T PRK08261        284 GLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRGQ----------  353 (450)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCC----------
Confidence            579999999975431    2235678889999999999999986632    3689999998776554432          


Q ss_pred             CchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCc
Q 023689          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (278)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (278)
                                ..|+.+|...+.+.+.++.+   +|++++++.||.+-++..... ..   .........     ......
T Consensus       354 ----------~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~-~~---~~~~~~~~~-----~~l~~~  414 (450)
T PRK08261        354 ----------TNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAI-PF---ATREAGRRM-----NSLQQG  414 (450)
T ss_pred             ----------hHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhcc-ch---hHHHHHhhc-----CCcCCC
Confidence                      56999999877777776643   589999999999876543221 11   111111110     012234


Q ss_pred             ccHHHHHHHHHhhhcC
Q 023689          229 VPVKDVAKAQVLLFES  244 (278)
Q Consensus       229 i~~~D~a~~~~~~~~~  244 (278)
                      ..++|+|+++.+++..
T Consensus       415 ~~p~dva~~~~~l~s~  430 (450)
T PRK08261        415 GLPVDVAETIAWLASP  430 (450)
T ss_pred             CCHHHHHHHHHHHhCh
Confidence            5678999999998864

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.83  E-value=5e-20  Score=150.42  Aligned_cols=207  Identities=16%  Similarity=0.097  Sum_probs=141.4

Q ss_pred             eEEEeCcchhhHHHHHHHHHH----CCCCeEEEEecCCCCCcccc-cCCCC-CCCceEEEEccCCChhhHHHHhcC----
Q 023689           11 TVCVTGANGFIGTWLVKTLLD----NNYTSINATVFPGSDSSHLF-ALPGA-GDANLRVFEADVLDSGAVSRAVEG----   80 (278)
Q Consensus        11 ~vlItGatG~iG~~l~~~L~~----~g~~~v~~~~r~~~~~~~~~-~~~~~-~~~~v~~~~~Dl~d~~~~~~~~~~----   80 (278)
                      .+|||||+++||.+++++|.+    .|+ .|++..|+.+..+.+. .+... ...++.++.+|++|+++++++++.    
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   80 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGS-VLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALREL   80 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCc-EEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhc
Confidence            589999999999999999997    798 8888888765433322 12110 112688999999999988887642    


Q ss_pred             -------ccEEEEecccCCCC----C---CCCchhhhhhhHHhHHHHHHHHHHh----c-C-CCEEEEecceeeeecCCC
Q 023689           81 -------CKGVFHVASPCTLE----D---PVDPEKELILPAVQGTLNVLEAAKR----F-G-VRRVVVTSSISAIVPNPG  140 (278)
Q Consensus        81 -------~d~vi~~a~~~~~~----~---~~~~~~~~~~~n~~~~~~ll~~~~~----~-~-~~~~v~~Ss~~~~~~~~~  140 (278)
                             .|++||+||.....    .   ..+.++..+++|+.++..+.+++.+    . + .+++|++||..+..+.+.
T Consensus        81 ~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~~  160 (256)
T TIGR01500        81 PRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKG  160 (256)
T ss_pred             cccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCCC
Confidence                   26899999864321    1   1245678999999998777766533    2 2 358999999776544332


Q ss_pred             CCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCc--hhHHHHHHHhh
Q 023689          141 WKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN--ASCAVLQQLLQ  215 (278)
Q Consensus       141 ~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~--~~~~~~~~~~~  215 (278)
                      .                    ..|+.+|.+.+.+.+.++.+   .|++++++.||.+-++.......  ........+..
T Consensus       161 ~--------------------~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  220 (256)
T TIGR01500       161 W--------------------ALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQE  220 (256)
T ss_pred             c--------------------hHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCChhHHHHHHH
Confidence            2                    57999999999999888765   48999999999998774221000  00011111111


Q ss_pred             CCCCcccccccCcccHHHHHHHHHhhhcC
Q 023689          216 GSKDTQEYHWLGAVPVKDVAKAQVLLFES  244 (278)
Q Consensus       216 ~~~~~~~~~~~~~i~~~D~a~~~~~~~~~  244 (278)
                      ..|      ...+..++|+|+.++.++.+
T Consensus       221 ~~~------~~~~~~p~eva~~~~~l~~~  243 (256)
T TIGR01500       221 LKA------KGKLVDPKVSAQKLLSLLEK  243 (256)
T ss_pred             HHh------cCCCCCHHHHHHHHHHHHhc
Confidence            111      23467999999999999863

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.83  E-value=1.2e-18  Score=140.48  Aligned_cols=202  Identities=18%  Similarity=0.160  Sum_probs=138.5

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCC-CeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc---CccEEE
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---GCKGVF   85 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---~~d~vi   85 (278)
                      |+++||||||+||++++++|.++|. ..|....|+....  .      ...+++++++|++|.++++++.+   ++|+||
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~--~------~~~~~~~~~~Dls~~~~~~~~~~~~~~id~li   72 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD--F------QHDNVQWHALDVTDEAEIKQLSEQFTQLDWLI   72 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc--c------ccCceEEEEecCCCHHHHHHHHHhcCCCCEEE
Confidence            5899999999999999999999863 1555555543221  1      11278899999999988777544   789999


Q ss_pred             EecccCCCCC----------CCCchhhhhhhHHhHHHHHHHHHHh----cCCCEEEEecceeeeecCCCCCCccccCCCC
Q 023689           86 HVASPCTLED----------PVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (278)
Q Consensus        86 ~~a~~~~~~~----------~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~  151 (278)
                      |+||......          ..+.+...+++|+.+...+++.+..    .+.++++++||..+....          .. 
T Consensus        73 ~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~----------~~-  141 (235)
T PRK09009         73 NCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISD----------NR-  141 (235)
T ss_pred             ECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeeccccccc----------CC-
Confidence            9999764211          1134567889998888877776643    345688998874331110          00 


Q ss_pred             CchhhhhccCchhhhHHHHHHHHHHHHHHh-----cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccccc
Q 023689          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK-----HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (278)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-----~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (278)
                            .+....|+.+|...+.+.+.++.+     .+++++.+.||.+.++.....           ....+      ..
T Consensus       142 ------~~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~-----------~~~~~------~~  198 (235)
T PRK09009        142 ------LGGWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPF-----------QQNVP------KG  198 (235)
T ss_pred             ------CCCcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcch-----------hhccc------cC
Confidence                  011246999999999888887754     489999999999988864321           11111      23


Q ss_pred             CcccHHHHHHHHHhhhcCCC--CCceEEe
Q 023689          227 GAVPVKDVAKAQVLLFESPA--ASGRYLC  253 (278)
Q Consensus       227 ~~i~~~D~a~~~~~~~~~~~--~~~~~~~  253 (278)
                      .++.++|+|+.++.++....  ..|.++.
T Consensus       199 ~~~~~~~~a~~~~~l~~~~~~~~~g~~~~  227 (235)
T PRK09009        199 KLFTPEYVAQCLLGIIANATPAQSGSFLA  227 (235)
T ss_pred             CCCCHHHHHHHHHHHHHcCChhhCCcEEe
Confidence            46799999999999998753  3455543

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.82  E-value=7.6e-19  Score=143.00  Aligned_cols=229  Identities=19%  Similarity=0.181  Sum_probs=154.0

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCC--CCCCceEEEEccCCChhhHHHHhc-
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPG--AGDANLRVFEADVLDSGAVSRAVE-   79 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~--~~~~~v~~~~~Dl~d~~~~~~~~~-   79 (278)
                      |..+++|++||||++.+||++++++|.+.|+ .|++..|+.+..+... .+..  ....++..+.+|+++.++..++++ 
T Consensus         3 ~~~l~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~   81 (270)
T KOG0725|consen    3 GGRLAGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEF   81 (270)
T ss_pred             CccCCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHH
Confidence            4568899999999999999999999999999 8888888776533322 1111  111268999999999877666653 


Q ss_pred             -------CccEEEEecccCCC-----CCCCCchhhhhhhHHhH-HHHHHHHHH----hcCCCEEEEecceeeeecCCCCC
Q 023689           80 -------GCKGVFHVASPCTL-----EDPVDPEKELILPAVQG-TLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWK  142 (278)
Q Consensus        80 -------~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~-~~~ll~~~~----~~~~~~~v~~Ss~~~~~~~~~~~  142 (278)
                             ++|+++|+||....     +...+.|+..+++|+.| ...+.+++.    +.+-..++++||..+..+.... 
T Consensus        82 ~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~~-  160 (270)
T KOG0725|consen   82 AVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPGS-  160 (270)
T ss_pred             HHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCC-
Confidence                   58999999997664     33456789999999995 556655553    3345678888886665443221 


Q ss_pred             CccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHH---hcCCceEEEecceeeCCCCCCCC--chhHHHHHHHhhCC
Q 023689          143 GKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYL--NASCAVLQQLLQGS  217 (278)
Q Consensus       143 ~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lrp~~i~g~~~~~~~--~~~~~~~~~~~~~~  217 (278)
                                        ...|+.+|.+.+.+.+..+.   ++|++++++-||.|.++......  .....+........
T Consensus       161 ------------------~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~  222 (270)
T KOG0725|consen  161 ------------------GVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKG  222 (270)
T ss_pred             ------------------cccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhcccc
Confidence                              03588888888877777765   46999999999999999722111  11112222100011


Q ss_pred             CCcccccccCcccHHHHHHHHHhhhcCCCC--CceEEecCc
Q 023689          218 KDTQEYHWLGAVPVKDVAKAQVLLFESPAA--SGRYLCTNG  256 (278)
Q Consensus       218 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~~~~~~~~  256 (278)
                      ..    ..-.+..++|+|..+.++......  .|..++.++
T Consensus       223 ~~----p~gr~g~~~eva~~~~fla~~~asyitG~~i~vdg  259 (270)
T KOG0725|consen  223 AV----PLGRVGTPEEVAEAAAFLASDDASYITGQTIIVDG  259 (270)
T ss_pred             cc----ccCCccCHHHHHHhHHhhcCcccccccCCEEEEeC
Confidence            10    134567899999999888876433  354444433

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.82  E-value=2.4e-18  Score=142.56  Aligned_cols=219  Identities=13%  Similarity=0.054  Sum_probs=143.1

Q ss_pred             ccCCceEEEeCc--chhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-c-----------CCCC-CCCceEEEEccC--
Q 023689            6 EKEEETVCVTGA--NGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-A-----------LPGA-GDANLRVFEADV--   68 (278)
Q Consensus         6 ~~~~~~vlItGa--tG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~-----------~~~~-~~~~v~~~~~Dl--   68 (278)
                      .+++|++|||||  +.+||.++++.|.+.|+ .|++ .|+.+..+... .           .... .......+.+|+  
T Consensus         6 ~l~gk~alITGa~~s~GIG~a~A~~la~~Ga-~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   83 (303)
T PLN02730          6 DLRGKRAFIAGVADDNGYGWAIAKALAAAGA-EILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVF   83 (303)
T ss_pred             CCCCCEEEEeCCCCCCcHHHHHHHHHHHCCC-EEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceec
Confidence            378999999999  89999999999999999 7776 44322211111 0           0000 001246788898  


Q ss_pred             CChh------------------hHHHHhc-------CccEEEEecccCC----C--CCCCCchhhhhhhHHhHHHHHHHH
Q 023689           69 LDSG------------------AVSRAVE-------GCKGVFHVASPCT----L--EDPVDPEKELILPAVQGTLNVLEA  117 (278)
Q Consensus        69 ~d~~------------------~~~~~~~-------~~d~vi~~a~~~~----~--~~~~~~~~~~~~~n~~~~~~ll~~  117 (278)
                      ++++                  +++++++       ++|++|||||...    .  +...++|+..+++|+.++..+.++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~  163 (303)
T PLN02730         84 DTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQH  163 (303)
T ss_pred             CccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHH
Confidence            3333                  5555544       4799999996432    1  233467899999999999888877


Q ss_pred             HHhc--CCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh----cCCceEEEec
Q 023689          118 AKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK----HGVDVVAIHP  191 (278)
Q Consensus       118 ~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~----~~~~~~~lrp  191 (278)
                      +...  .-+++|++||..+..+.+..                   ...|+.+|...+.+.+.++.+    +|+++++|.|
T Consensus       164 ~~p~m~~~G~II~isS~a~~~~~p~~-------------------~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~P  224 (303)
T PLN02730        164 FGPIMNPGGASISLTYIASERIIPGY-------------------GGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISA  224 (303)
T ss_pred             HHHHHhcCCEEEEEechhhcCCCCCC-------------------chhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEee
Confidence            6443  12689999997765443321                   136999999999888888864    4799999999


Q ss_pred             ceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHHHHHHHHHhhhcCCC--CCceEE
Q 023689          192 ATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYL  252 (278)
Q Consensus       192 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~  252 (278)
                      |.+.++..... ..............|      ...+..++|++.++++++....  ..|..+
T Consensus       225 G~v~T~~~~~~-~~~~~~~~~~~~~~p------l~r~~~peevA~~~~fLaS~~a~~itG~~l  280 (303)
T PLN02730        225 GPLGSRAAKAI-GFIDDMIEYSYANAP------LQKELTADEVGNAAAFLASPLASAITGATI  280 (303)
T ss_pred             CCccCchhhcc-cccHHHHHHHHhcCC------CCCCcCHHHHHHHHHHHhCccccCccCCEE
Confidence            99998864321 111111111111112      1235689999999999986433  245443

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.82  E-value=1.3e-18  Score=148.78  Aligned_cols=190  Identities=17%  Similarity=0.070  Sum_probs=129.7

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      +++|+++||||+|+||++++++|.++|+ .|+++.|+++......  .... ..+..+.+|++|++++.+.+.++|++||
T Consensus       176 l~gK~VLITGASgGIG~aLA~~La~~G~-~Vi~l~r~~~~l~~~~--~~~~-~~v~~v~~Dvsd~~~v~~~l~~IDiLIn  251 (406)
T PRK07424        176 LKGKTVAVTGASGTLGQALLKELHQQGA-KVVALTSNSDKITLEI--NGED-LPVKTLHWQVGQEAALAELLEKVDILII  251 (406)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHH--hhcC-CCeEEEEeeCCCHHHHHHHhCCCCEEEE
Confidence            4678999999999999999999999999 8888887654322111  1111 1567889999999999999999999999


Q ss_pred             ecccCCC-CCCCCchhhhhhhHHhHHHHHHHHHHh----cCC---C-EEEEecceeeeecCCCCCCccccCCCCCchhhh
Q 023689           87 VASPCTL-EDPVDPEKELILPAVQGTLNVLEAAKR----FGV---R-RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYC  157 (278)
Q Consensus        87 ~a~~~~~-~~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~---~-~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~  157 (278)
                      +||.... +...++++..+++|+.++.++++++.+    .+.   + .+|++|+ +...+ +.                 
T Consensus       252 nAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~~~~-~~-----------------  312 (406)
T PRK07424        252 NHGINVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AEVNP-AF-----------------  312 (406)
T ss_pred             CCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-ccccC-CC-----------------
Confidence            9987543 223345678999999999999988743    221   2 2444443 22111 11                 


Q ss_pred             hccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHHHHHHH
Q 023689          158 KSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKA  237 (278)
Q Consensus       158 ~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  237 (278)
                         ...|+.||.+.+.+........++.+..+.||.+.++..                         ....++++|+|+.
T Consensus       313 ---~~~Y~ASKaAl~~l~~l~~~~~~~~I~~i~~gp~~t~~~-------------------------~~~~~spe~vA~~  364 (406)
T PRK07424        313 ---SPLYELSKRALGDLVTLRRLDAPCVVRKLILGPFKSNLN-------------------------PIGVMSADWVAKQ  364 (406)
T ss_pred             ---chHHHHHHHHHHHHHHHHHhCCCCceEEEEeCCCcCCCC-------------------------cCCCCCHHHHHHH
Confidence               136999999998875433333455555555544322210                         1124789999999


Q ss_pred             HHhhhcCCCC
Q 023689          238 QVLLFESPAA  247 (278)
Q Consensus       238 ~~~~~~~~~~  247 (278)
                      ++.+++++..
T Consensus       365 il~~i~~~~~  374 (406)
T PRK07424        365 ILKLAKRDFR  374 (406)
T ss_pred             HHHHHHCCCC
Confidence            9999976543

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.82  E-value=5.2e-19  Score=136.05  Aligned_cols=164  Identities=23%  Similarity=0.286  Sum_probs=125.3

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccc----ccCCCCCCCceEEEEccCCChhhHHHHhc------
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL----FALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~----~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~------   79 (278)
                      ++++||||+|+||.+++++|.++|++.|++..|+.......    ..+.... .++.++.+|+++++++.++++      
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   79 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALG-AEVTVVACDVADRAALAAALAAIPARL   79 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcC-CeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            57999999999999999999999975677777765443221    1111111 267889999999988887765      


Q ss_pred             -CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCch
Q 023689           80 -GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDL  154 (278)
Q Consensus        80 -~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~  154 (278)
                       .+|.|||+|+....    ....+.++..+++|+.++.++++++++.+.+++|++||..+.++....             
T Consensus        80 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~~~~~~~-------------  146 (180)
T smart00822       80 GPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGVLGNPGQ-------------  146 (180)
T ss_pred             CCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHhcCCCCc-------------
Confidence             36999999986443    122345678899999999999999988888899999997776654332             


Q ss_pred             hhhhccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceee
Q 023689          155 EYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCL  195 (278)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~  195 (278)
                             ..|+.+|...+.+.+.+. ..+++++.+.||.+-
T Consensus       147 -------~~y~~sk~~~~~~~~~~~-~~~~~~~~~~~g~~~  179 (180)
T smart00822      147 -------ANYAAANAFLDALAAHRR-ARGLPATSINWGAWA  179 (180)
T ss_pred             -------hhhHHHHHHHHHHHHHHH-hcCCceEEEeecccc
Confidence                   569999999999886554 679999999988764

It uses NADPH to reduce the keto group to a hydroxy group.

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.80  E-value=1e-17  Score=138.05  Aligned_cols=217  Identities=21%  Similarity=0.260  Sum_probs=158.6

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEecc
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a~   89 (278)
                      |+||||||||++|++++++|+++|+ +|.+.+|+++...... .      .+++..+|+.++.++..+++++|.++++.+
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~-~v~~~~r~~~~~~~~~-~------~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~   72 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGH-EVRAAVRNPEAAAALA-G------GVEVVLGDLRDPKSLVAGAKGVDGVLLISG   72 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCC-EEEEEEeCHHHHHhhc-C------CcEEEEeccCCHhHHHHHhccccEEEEEec
Confidence            5899999999999999999999999 9999999887766555 1      899999999999999999999999999987


Q ss_pred             cCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhhHHH
Q 023689           90 PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKT  169 (278)
Q Consensus        90 ~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~  169 (278)
                      ... ...     ...........+..+++. .+.++++++|...+....                      ...|..+|.
T Consensus        73 ~~~-~~~-----~~~~~~~~~~~~~a~~a~-~~~~~~~~~s~~~~~~~~----------------------~~~~~~~~~  123 (275)
T COG0702          73 LLD-GSD-----AFRAVQVTAVVRAAEAAG-AGVKHGVSLSVLGADAAS----------------------PSALARAKA  123 (275)
T ss_pred             ccc-ccc-----chhHHHHHHHHHHHHHhc-CCceEEEEeccCCCCCCC----------------------ccHHHHHHH
Confidence            533 111     122222333344444443 346778888764331110                      146999999


Q ss_pred             HHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCc-ccccccCcccHHHHHHHHHhhhcCCCCC
Q 023689          170 LAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT-QEYHWLGAVPVKDVAKAQVLLFESPAAS  248 (278)
Q Consensus       170 ~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~D~a~~~~~~~~~~~~~  248 (278)
                      ..|.++.    ..|++++++|+..+|.+.....      .......+.+.. .+....+++..+|++..+...+..+...
T Consensus       124 ~~e~~l~----~sg~~~t~lr~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~i~~~d~a~~~~~~l~~~~~~  193 (275)
T COG0702         124 AVEAALR----SSGIPYTTLRRAAFYLGAGAAF------IEAAEAAGLPVIPRGIGRLSPIAVDDVAEALAAALDAPATA  193 (275)
T ss_pred             HHHHHHH----hcCCCeEEEecCeeeeccchhH------HHHHHhhCCceecCCCCceeeeEHHHHHHHHHHHhcCCccc
Confidence            9999997    7799999999887777653321      122223333322 2345789999999999999999877544


Q ss_pred             c-eE-EecCccccHHHHHHHHHHhCCC
Q 023689          249 G-RY-LCTNGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       249 ~-~~-~~~~~~~s~~e~~~~i~~~~~~  273 (278)
                      + .| +.+++..+..++.+.+.+..++
T Consensus       194 ~~~~~l~g~~~~~~~~~~~~l~~~~gr  220 (275)
T COG0702         194 GRTYELAGPEALTLAELASGLDYTIGR  220 (275)
T ss_pred             CcEEEccCCceecHHHHHHHHHHHhCC
Confidence            4 56 4556789999999999998743

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.80  E-value=1.3e-18  Score=139.22  Aligned_cols=197  Identities=9%  Similarity=0.071  Sum_probs=134.2

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      ++++|+++||||+++||++++++|.++|+ .|++..|+.+..+... .+..... ++..+.+|++|+++++++++     
T Consensus         2 ~~~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~i~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~   79 (227)
T PRK08862          2 DIKSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQSALKDTYEQCSALTD-NVYSFQLKDFSQESIRHLFDAIEQQ   79 (227)
T ss_pred             CCCCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCC-CeEEEEccCCCHHHHHHHHHHHHHH
Confidence            35678999999999999999999999999 8888888765433321 1111122 67788999999998887653     


Q ss_pred             ---CccEEEEecccCCCC-----CCCCchhhhhhhHHhHHHHHHH----HHHhcC-CCEEEEecceeeeecCCCCCCccc
Q 023689           80 ---GCKGVFHVASPCTLE-----DPVDPEKELILPAVQGTLNVLE----AAKRFG-VRRVVVTSSISAIVPNPGWKGKVF  146 (278)
Q Consensus        80 ---~~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~ll~----~~~~~~-~~~~v~~Ss~~~~~~~~~~~~~~~  146 (278)
                         ++|++||+||.....     ...+.+.+.+++|+.++..+.+    .+++++ .+.+|++||..+.   +..     
T Consensus        80 ~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~---~~~-----  151 (227)
T PRK08862         80 FNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH---QDL-----  151 (227)
T ss_pred             hCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC---CCc-----
Confidence               589999999743321     1223445567778777665544    444443 4689999984331   111     


Q ss_pred             cCCCCCchhhhhccCchhhhHHHHHHHHHHHHHH---hcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccc
Q 023689          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (278)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (278)
                                     ..|+.+|...+.+.+.++.   .+|++++.+.||.+-++....     ..-...           
T Consensus       152 ---------------~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~~~~-----~~~~~~-----------  200 (227)
T PRK08862        152 ---------------TGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSANGELD-----AVHWAE-----------  200 (227)
T ss_pred             ---------------chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCCccC-----HHHHHH-----------
Confidence                           4588888888877777765   358999999999998884221     110111           


Q ss_pred             cccCcccHHHHHHHHHhhhcCCCCCc
Q 023689          224 HWLGAVPVKDVAKAQVLLFESPAASG  249 (278)
Q Consensus       224 ~~~~~i~~~D~a~~~~~~~~~~~~~~  249 (278)
                           + .+|++.+..+++.++.-.|
T Consensus       201 -----~-~~~~~~~~~~l~~~~~~tg  220 (227)
T PRK08862        201 -----I-QDELIRNTEYIVANEYFSG  220 (227)
T ss_pred             -----H-HHHHHhheeEEEecccccc
Confidence                 1 1788888888886544444

>PLN00015 protochlorophyllide reductase

Probab=99.79  E-value=2.6e-18  Score=143.87  Aligned_cols=230  Identities=15%  Similarity=0.096  Sum_probs=142.0

Q ss_pred             EEeCcchhhHHHHHHHHHHCC-CCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc-------CccE
Q 023689           13 CVTGANGFIGTWLVKTLLDNN-YTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-------GCKG   83 (278)
Q Consensus        13 lItGatG~iG~~l~~~L~~~g-~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   83 (278)
                      |||||+++||.+++++|.++| + .|++..|+.+...... .+.... ..+.++++|++|.+++.++++       ++|+
T Consensus         1 lITGas~GIG~aia~~l~~~G~~-~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~   78 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKW-HVVMACRDFLKAERAAKSAGMPK-DSYTVMHLDLASLDSVRQFVDNFRRSGRPLDV   78 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCC-EEEEEeCCHHHHHHHHHHhcCCC-CeEEEEEecCCCHHHHHHHHHHHHhcCCCCCE
Confidence            699999999999999999999 8 8888888654433221 121111 268889999999998887764       4799


Q ss_pred             EEEecccCCC-----CCCCCchhhhhhhHHhHHHHHHHHH----HhcC--CCEEEEecceeeeecCCC-C-CC----c--
Q 023689           84 VFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAA----KRFG--VRRVVVTSSISAIVPNPG-W-KG----K--  144 (278)
Q Consensus        84 vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~--~~~~v~~Ss~~~~~~~~~-~-~~----~--  144 (278)
                      +|||||....     +...+.++..+++|+.|+..+++++    ++.+  .+++|++||..+...... . ..    .  
T Consensus        79 lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~  158 (308)
T PLN00015         79 LVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDL  158 (308)
T ss_pred             EEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhh
Confidence            9999987432     1123467889999999977776554    4443  478999999766422110 0 00    0  


Q ss_pred             -----cccCCCCC---chhhhhccCchhhhHHHHHHHHHHHHHHh----cCCceEEEecceee-CCCCCCCCchhHHHHH
Q 023689          145 -----VFDETSWT---DLEYCKSRKKWYPVSKTLAEKAAWEFAEK----HGVDVVAIHPATCL-GPLMQPYLNASCAVLQ  211 (278)
Q Consensus       145 -----~~~E~~~~---~~~~~~~~~~~y~~sK~~~e~~~~~~~~~----~~~~~~~lrp~~i~-g~~~~~~~~~~~~~~~  211 (278)
                           ...+....   .. ........|+.||.+.....+.++++    .|+.+++++||.|. ++............. 
T Consensus       159 ~~~~~~~~~~~~~~~~~~-~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~~~~-  236 (308)
T PLN00015        159 RGLAGGLNGLNSSAMIDG-GEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRLLF-  236 (308)
T ss_pred             hhhhcccCCccchhhccc-cCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHHHHHHH-
Confidence                 00000000   00 00011246999999977766777664    47999999999995 444322211111000 


Q ss_pred             HHhhCCCCcccccccCcccHHHHHHHHHhhhcCCC--CCceEE
Q 023689          212 QLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYL  252 (278)
Q Consensus       212 ~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~  252 (278)
                      ......+      ...+..+++.|+.++.++....  ..|.|+
T Consensus       237 ~~~~~~~------~~~~~~pe~~a~~~~~l~~~~~~~~~G~~~  273 (308)
T PLN00015        237 PPFQKYI------TKGYVSEEEAGKRLAQVVSDPSLTKSGVYW  273 (308)
T ss_pred             HHHHHHH------hcccccHHHhhhhhhhhccccccCCCcccc
Confidence            0000000      1124688999999998876533  346664

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.79  E-value=1.2e-18  Score=130.48  Aligned_cols=170  Identities=19%  Similarity=0.170  Sum_probs=130.1

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc------
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~------   79 (278)
                      +.++.+||||||+++||..|++++++.|. .|++..|+.+.....+...    ..+....+|+.|.++.+++++      
T Consensus         2 k~tgnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~----p~~~t~v~Dv~d~~~~~~lvewLkk~~   76 (245)
T COG3967           2 KTTGNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAEN----PEIHTEVCDVADRDSRRELVEWLKKEY   76 (245)
T ss_pred             cccCcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcC----cchheeeecccchhhHHHHHHHHHhhC
Confidence            56788999999999999999999999998 8888888776544433221    177888899999998777764      


Q ss_pred             -CccEEEEecccCCCCC------CCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccC
Q 023689           80 -GCKGVFHVASPCTLED------PVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (278)
Q Consensus        80 -~~d~vi~~a~~~~~~~------~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E  148 (278)
                       +.+++|||||+.....      ..++.++-+++|+.++.+|..+.    .++.-..+|.+||.-++-+....       
T Consensus        77 P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~-------  149 (245)
T COG3967          77 PNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMAST-------  149 (245)
T ss_pred             CchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCccccc-------
Confidence             5699999999866522      22334666788988777766655    44545679999997777665442       


Q ss_pred             CCCCchhhhhccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCC
Q 023689          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGP  197 (278)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~  197 (278)
                           |.||..|+....+|+.+-|++-     ..++++.-+-|+.|-++
T Consensus       150 -----PvYcaTKAaiHsyt~aLR~Qlk-----~t~veVIE~~PP~V~t~  188 (245)
T COG3967         150 -----PVYCATKAAIHSYTLALREQLK-----DTSVEVIELAPPLVDTT  188 (245)
T ss_pred             -----ccchhhHHHHHHHHHHHHHHhh-----hcceEEEEecCCceecC
Confidence                 6688888888888888777654     56899999999999986

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.79  E-value=3.5e-19  Score=135.94  Aligned_cols=151  Identities=21%  Similarity=0.234  Sum_probs=118.4

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecC--CCCCccc-ccCCCCCCCceEEEEccCCChhhHHHHhc-------
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFP--GSDSSHL-FALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~--~~~~~~~-~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------   79 (278)
                      |+++||||+|.||+.++++|+++|...|+++.|+  .+....+ ..+.... .++.++++|++++++++++++       
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPG-AKITFIECDLSDPESIRALIEEVIKRFG   79 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTT-SEEEEEESETTSHHHHHHHHHHHHHHHS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccc-cccccccccccccccccccccccccccc
Confidence            6899999999999999999999976578888887  2222222 2222222 289999999999998888875       


Q ss_pred             CccEEEEecccCCCCC----CCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchh
Q 023689           80 GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLE  155 (278)
Q Consensus        80 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~  155 (278)
                      .+|++||+||......    ..+.++..+++|+.+...+.+++..++.+++|++||..+..+.+..              
T Consensus        80 ~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~--------------  145 (167)
T PF00106_consen   80 PLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGVRGSPGM--------------  145 (167)
T ss_dssp             SESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGTSSSTTB--------------
T ss_pred             cccccccccccccccccccccchhhhhccccccceeeeeeehheeccccceEEecchhhccCCCCC--------------
Confidence            5799999999866421    2245678999999999999999988767899999998887665543              


Q ss_pred             hhhccCchhhhHHHHHHHHHHHHHHh
Q 023689          156 YCKSRKKWYPVSKTLAEKAAWEFAEK  181 (278)
Q Consensus       156 ~~~~~~~~y~~sK~~~e~~~~~~~~~  181 (278)
                            ..|+.+|.+.+.+.+.++++
T Consensus       146 ------~~Y~askaal~~~~~~la~e  165 (167)
T PF00106_consen  146 ------SAYSASKAALRGLTQSLAAE  165 (167)
T ss_dssp             ------HHHHHHHHHHHHHHHHHHHH
T ss_pred             ------hhHHHHHHHHHHHHHHHHHh
Confidence                  57999999999999888765

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=99.79  E-value=1.2e-17  Score=123.08  Aligned_cols=203  Identities=19%  Similarity=0.240  Sum_probs=149.6

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEecc
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a~   89 (278)
                      |||-|+||||.+|+++++..+++|| +|++++|++.+....+        .+.+++.|+.|++++.+.+.+.|+||..-+
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGH-eVTAivRn~~K~~~~~--------~~~i~q~Difd~~~~a~~l~g~DaVIsA~~   71 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGH-EVTAIVRNASKLAARQ--------GVTILQKDIFDLTSLASDLAGHDAVISAFG   71 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCC-eeEEEEeChHhccccc--------cceeecccccChhhhHhhhcCCceEEEecc
Confidence            6899999999999999999999999 9999999987755432        788999999999999999999999998765


Q ss_pred             cCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhhHHH
Q 023689           90 PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKT  169 (278)
Q Consensus        90 ~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~  169 (278)
                      ....    + .+..   .......|++..+..++.|++.++..+..+-.++.  ..++-..++.        ..|...+.
T Consensus        72 ~~~~----~-~~~~---~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~--rLvD~p~fP~--------ey~~~A~~  133 (211)
T COG2910          72 AGAS----D-NDEL---HSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGT--RLVDTPDFPA--------EYKPEALA  133 (211)
T ss_pred             CCCC----C-hhHH---HHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCc--eeecCCCCch--------hHHHHHHH
Confidence            5321    1 1111   13336778888888899999999987777766552  3333222222        24777777


Q ss_pred             HHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCC-CcccccccCcccHHHHHHHHHhhhcCCCCC
Q 023689          170 LAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSK-DTQEYHWLGAVPVKDVAKAQVLLFESPAAS  248 (278)
Q Consensus       170 ~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~  248 (278)
                      .+|.+ ..+..+.+++|+.+.|+..|-|+.+..         +..-|+. +.....-.++|+..|.|.+++.-++++...
T Consensus       134 ~ae~L-~~Lr~~~~l~WTfvSPaa~f~PGerTg---------~yrlggD~ll~n~~G~SrIS~aDYAiA~lDe~E~~~h~  203 (211)
T COG2910         134 QAEFL-DSLRAEKSLDWTFVSPAAFFEPGERTG---------NYRLGGDQLLVNAKGESRISYADYAIAVLDELEKPQHI  203 (211)
T ss_pred             HHHHH-HHHhhccCcceEEeCcHHhcCCccccC---------ceEeccceEEEcCCCceeeeHHHHHHHHHHHHhccccc
Confidence            77743 344445569999999999999876544         1122332 333335678999999999999999987654


Q ss_pred             c
Q 023689          249 G  249 (278)
Q Consensus       249 ~  249 (278)
                      .
T Consensus       204 r  204 (211)
T COG2910         204 R  204 (211)
T ss_pred             c
Confidence            3

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.77  E-value=1.8e-17  Score=126.27  Aligned_cols=195  Identities=21%  Similarity=0.183  Sum_probs=138.2

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHC-CCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc---------
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---------   79 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~-g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---------   79 (278)
                      +.|+||||+.+||..|+++|++. |.+.++...|+++.+..........+.++++++.|+++.+++.++++         
T Consensus         4 ksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~~   83 (249)
T KOG1611|consen    4 KSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGSD   83 (249)
T ss_pred             ccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhcccC
Confidence            57999999999999999999976 55455556666766433333333344599999999999988888765         


Q ss_pred             CccEEEEecccCCC-----CCCCCchhhhhhhHHhHHHHHHHHH----HhcCCC-----------EEEEecceeeeecCC
Q 023689           80 GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVR-----------RVVVTSSISAIVPNP  139 (278)
Q Consensus        80 ~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~-----------~~v~~Ss~~~~~~~~  139 (278)
                      +.|.++++||....     +...+.+...+++|..++..+.+++    ++...+           .+|++||.++-.+..
T Consensus        84 GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~~~  163 (249)
T KOG1611|consen   84 GLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIGGF  163 (249)
T ss_pred             CceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccccCCC
Confidence            56999999997554     2223457889999988777665554    333222           699898877652211


Q ss_pred             CCCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhC
Q 023689          140 GWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQG  216 (278)
Q Consensus       140 ~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~  216 (278)
                      .                 ..+...|.+||.+.....++.+-+   .++-++.++||.|-+......              
T Consensus       164 ~-----------------~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg~~--------------  212 (249)
T KOG1611|consen  164 R-----------------PGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGGKK--------------  212 (249)
T ss_pred             C-----------------CcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCCCC--------------
Confidence            1                 112257999999999888877743   478888999999998875432              


Q ss_pred             CCCcccccccCcccHHHHHHHHHhhhcCC
Q 023689          217 SKDTQEYHWLGAVPVKDVAKAQVLLFESP  245 (278)
Q Consensus       217 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  245 (278)
                                ..+.+++-+..++..+.+-
T Consensus       213 ----------a~ltveeSts~l~~~i~kL  231 (249)
T KOG1611|consen  213 ----------AALTVEESTSKLLASINKL  231 (249)
T ss_pred             ----------cccchhhhHHHHHHHHHhc
Confidence                      2357777777777776653

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.76  E-value=7.2e-17  Score=133.70  Aligned_cols=228  Identities=11%  Similarity=0.065  Sum_probs=137.9

Q ss_pred             ccccCCceEEEeCcc--hhhHHHHHHHHHHCCCCeEEEEecCC--------CCCcccccC-CCCCCC-----ceEEEEcc
Q 023689            4 EAEKEEETVCVTGAN--GFIGTWLVKTLLDNNYTSINATVFPG--------SDSSHLFAL-PGAGDA-----NLRVFEAD   67 (278)
Q Consensus         4 m~~~~~~~vlItGat--G~iG~~l~~~L~~~g~~~v~~~~r~~--------~~~~~~~~~-~~~~~~-----~v~~~~~D   67 (278)
                      |..+++|++|||||+  .+||+++++.|.++|+ .|++.++.+        ......... ......     .+..+..|
T Consensus         3 ~~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga-~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d   81 (299)
T PRK06300          3 KIDLTGKIAFIAGIGDDQGYGWGIAKALAEAGA-TILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDAS   81 (299)
T ss_pred             CcCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCC-EEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhh
Confidence            346788999999995  9999999999999999 676654321        000000000 000000     00011233


Q ss_pred             CCChh------------------hHHHHhc-------CccEEEEecccCC--C----CCCCCchhhhhhhHHhHHHHHHH
Q 023689           68 VLDSG------------------AVSRAVE-------GCKGVFHVASPCT--L----EDPVDPEKELILPAVQGTLNVLE  116 (278)
Q Consensus        68 l~d~~------------------~~~~~~~-------~~d~vi~~a~~~~--~----~~~~~~~~~~~~~n~~~~~~ll~  116 (278)
                      +.+.+                  +++++++       ++|++|||||...  .    +...++|+..+++|+.+..++.+
T Consensus        82 ~~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~  161 (299)
T PRK06300         82 FDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLS  161 (299)
T ss_pred             cCCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            33332                  2444433       5899999997532  1    22345778899999999999888


Q ss_pred             HHHhc--CCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh----cCCceEEEe
Q 023689          117 AAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK----HGVDVVAIH  190 (278)
Q Consensus       117 ~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~----~~~~~~~lr  190 (278)
                      ++...  .-+++|++||..+..+.+..                   ...|+.+|...+.+.+.++.+    +|+++++|.
T Consensus       162 a~~p~m~~~G~ii~iss~~~~~~~p~~-------------------~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~  222 (299)
T PRK06300        162 HFGPIMNPGGSTISLTYLASMRAVPGY-------------------GGGMSSAKAALESDTKVLAWEAGRRWGIRVNTIS  222 (299)
T ss_pred             HHHHHhhcCCeEEEEeehhhcCcCCCc-------------------cHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEE
Confidence            77543  23579999887665443321                   025899999988888877764    389999999


Q ss_pred             cceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHHHHHHHHHhhhcCCC--CCceEEecCccc
Q 023689          191 PATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLCTNGIY  258 (278)
Q Consensus       191 p~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~~~~  258 (278)
                      ||.+.++..... ..............+      ...+..++|+|.++++++....  ..|..+..++.+
T Consensus       223 PG~v~T~~~~~~-~~~~~~~~~~~~~~p------~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~  285 (299)
T PRK06300        223 AGPLASRAGKAI-GFIERMVDYYQDWAP------LPEPMEAEQVGAAAAFLVSPLASAITGETLYVDHGA  285 (299)
T ss_pred             eCCccChhhhcc-cccHHHHHHHHhcCC------CCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            999988753221 001111111111111      2345689999999999886532  345443333333

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.76  E-value=5.4e-17  Score=134.13  Aligned_cols=223  Identities=17%  Similarity=0.086  Sum_probs=152.9

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCC-CCCCCceEEEEccCCChhhHHHHhc----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALP-GAGDANLRVFEADVLDSGAVSRAVE----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~-~~~~~~v~~~~~Dl~d~~~~~~~~~----   79 (278)
                      ...+++++||||+++||.+++++|..+|. .|+...|+.+..+... .+. .....++.++++|++|.++++++.+    
T Consensus        32 ~~~~~~~vVTGansGIG~eta~~La~~Ga-~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~  110 (314)
T KOG1208|consen   32 DLSGKVALVTGATSGIGFETARELALRGA-HVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKK  110 (314)
T ss_pred             cCCCcEEEEECCCCchHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence            34568999999999999999999999998 8999999875433332 222 1233378899999999999998875    


Q ss_pred             ---CccEEEEecccCCCCC--CCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccCCC
Q 023689           80 ---GCKGVFHVASPCTLED--PVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (278)
Q Consensus        80 ---~~d~vi~~a~~~~~~~--~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~  150 (278)
                         ..|++|+|||+.....  ..+..+..+.+|..|...|.+.+    +.....|+|++||... ...... .....|..
T Consensus       111 ~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~-~~~~~~-~~l~~~~~  188 (314)
T KOG1208|consen  111 KEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG-GGKIDL-KDLSGEKA  188 (314)
T ss_pred             cCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc-cCccch-hhccchhc
Confidence               4699999999876533  34568999999988877666655    5554479999999665 111111 12222222


Q ss_pred             CCchhhhhccCchhhhHHHHHHHHHHHHHHhc--CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCc
Q 023689          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (278)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (278)
                      .....     ...|+.||.+......+++++.  |+.++++.||.+.++...........+...+.. .         -+
T Consensus       189 ~~~~~-----~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~l~r~~~~~~~l~~~l~~-~---------~~  253 (314)
T KOG1208|consen  189 KLYSS-----DAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTGLSRVNLLLRLLAKKLSW-P---------LT  253 (314)
T ss_pred             cCccc-----hhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccceecchHHHHHHHHHHHH-H---------hc
Confidence            10111     1259999999999999888876  699999999999999543321112222222211 0         01


Q ss_pred             ccHHHHHHHHHhhhcCCC
Q 023689          229 VPVKDVAKAQVLLFESPA  246 (278)
Q Consensus       229 i~~~D~a~~~~~~~~~~~  246 (278)
                      -..+.-|...+.+..+++
T Consensus       254 ks~~~ga~t~~~~a~~p~  271 (314)
T KOG1208|consen  254 KSPEQGAATTCYAALSPE  271 (314)
T ss_pred             cCHHHHhhheehhccCcc
Confidence            256778888888877764

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.75  E-value=5.2e-18  Score=137.26  Aligned_cols=213  Identities=19%  Similarity=0.185  Sum_probs=149.0

Q ss_pred             Ccc--hhhHHHHHHHHHHCCCCeEEEEecCCCCC-cccccCCCCCCCceEEEEccCCChhhHHHHhc--------CccEE
Q 023689           16 GAN--GFIGTWLVKTLLDNNYTSINATVFPGSDS-SHLFALPGAGDANLRVFEADVLDSGAVSRAVE--------GCKGV   84 (278)
Q Consensus        16 Gat--G~iG~~l~~~L~~~g~~~v~~~~r~~~~~-~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--------~~d~v   84 (278)
                      |++  ++||+++++.|+++|+ +|++..|+.+.. ..+..+....  ...++++|++|+++++++++        ++|++
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga-~V~~~~~~~~~~~~~~~~l~~~~--~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~l   77 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGA-NVILTDRNEEKLADALEELAKEY--GAEVIQCDLSDEESVEALFDEAVERFGGRIDIL   77 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTE-EEEEEESSHHHHHHHHHHHHHHT--TSEEEESCTTSHHHHHHHHHHHHHHHCSSESEE
T ss_pred             CCCCCCChHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHHHc--CCceEeecCcchHHHHHHHHHHHhhcCCCeEEE
Confidence            666  9999999999999999 899999977652 1122221111  34469999999998888753        57999


Q ss_pred             EEecccCCC----C----CCCCchhhhhhhHHhHHHHHHHHHHhc--CCCEEEEecceeeeecCCCCCCccccCCCCCch
Q 023689           85 FHVASPCTL----E----DPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDL  154 (278)
Q Consensus        85 i~~a~~~~~----~----~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~  154 (278)
                      ||+++....    .    ...+.+...+++|+.+...+++++.+.  .-+++|++||..+..+.+..             
T Consensus        78 V~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~~~~~-------------  144 (241)
T PF13561_consen   78 VNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRPMPGY-------------  144 (241)
T ss_dssp             EEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSBSTTT-------------
T ss_pred             EecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcccCccc-------------
Confidence            999986553    1    122467888999999999888887443  23679999987664443321             


Q ss_pred             hhhhccCchhhhHHHHHHHHHHHHHH---h-cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCccc
Q 023689          155 EYCKSRKKWYPVSKTLAEKAAWEFAE---K-HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP  230 (278)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e~~~~~~~~---~-~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  230 (278)
                             ..|+.+|...+.+.+.++.   + +||++++|.||.+.++..... .....+........|.      ..+..
T Consensus       145 -------~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~-~~~~~~~~~~~~~~pl------~r~~~  210 (241)
T PF13561_consen  145 -------SAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERI-PGNEEFLEELKKRIPL------GRLGT  210 (241)
T ss_dssp             -------HHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHH-HTHHHHHHHHHHHSTT------SSHBE
T ss_pred             -------hhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhcc-ccccchhhhhhhhhcc------CCCcC
Confidence                   4688888888877777764   4 689999999999988752211 1123344444444443      44679


Q ss_pred             HHHHHHHHHhhhcCC--CCCceEEecCccc
Q 023689          231 VKDVAKAQVLLFESP--AASGRYLCTNGIY  258 (278)
Q Consensus       231 ~~D~a~~~~~~~~~~--~~~~~~~~~~~~~  258 (278)
                      ++|+|+++.+++...  .-.|+.+..|+.+
T Consensus       211 ~~evA~~v~fL~s~~a~~itG~~i~vDGG~  240 (241)
T PF13561_consen  211 PEEVANAVLFLASDAASYITGQVIPVDGGF  240 (241)
T ss_dssp             HHHHHHHHHHHHSGGGTTGTSEEEEESTTG
T ss_pred             HHHHHHHHHHHhCccccCccCCeEEECCCc
Confidence            999999999999765  3457766665544

...

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.74  E-value=2.3e-16  Score=126.36  Aligned_cols=170  Identities=25%  Similarity=0.295  Sum_probs=130.7

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc-------
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------   79 (278)
                      ...|-|||||+-.+.|+.||++|.++|+ .|++....++..+.+.....  +.+...++.|++++++++++.+       
T Consensus        27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf-~V~Agcl~~~gae~L~~~~~--s~rl~t~~LDVT~~esi~~a~~~V~~~l~  103 (322)
T KOG1610|consen   27 LSDKAVLITGCDSGFGRLLAKKLDKKGF-RVFAGCLTEEGAESLRGETK--SPRLRTLQLDVTKPESVKEAAQWVKKHLG  103 (322)
T ss_pred             cCCcEEEEecCCcHHHHHHHHHHHhcCC-EEEEEeecCchHHHHhhhhc--CCcceeEeeccCCHHHHHHHHHHHHHhcc
Confidence            4568899999999999999999999999 88887765555555443321  2388888999999999999875       


Q ss_pred             --CccEEEEecccCCC--CC---CCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccC
Q 023689           80 --GCKGVFHVASPCTL--ED---PVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (278)
Q Consensus        80 --~~d~vi~~a~~~~~--~~---~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E  148 (278)
                        +...||||||+...  +.   ..+++...+++|+.|+..+.++.    +++. +|+|++||..+.-+.+..       
T Consensus       104 ~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar-GRvVnvsS~~GR~~~p~~-------  175 (322)
T KOG1610|consen  104 EDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR-GRVVNVSSVLGRVALPAL-------  175 (322)
T ss_pred             cccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc-CeEEEecccccCccCccc-------
Confidence              45899999996543  11   23577899999999888777766    4444 699999998875554432       


Q ss_pred             CCCCchhhhhccCchhhhHHHHHHHHHHHHHH---hcCCceEEEecceeeCCCCC
Q 023689          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQ  200 (278)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lrp~~i~g~~~~  200 (278)
                                   ++|..||.+.|.....+.+   .+|+.+.++-||..-++...
T Consensus       176 -------------g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l~~  217 (322)
T KOG1610|consen  176 -------------GPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNLAN  217 (322)
T ss_pred             -------------ccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCccccccCC
Confidence                         6899999999977766654   46999999999966555543

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.74  E-value=4e-18  Score=124.32  Aligned_cols=214  Identities=17%  Similarity=0.142  Sum_probs=149.5

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcC---cc
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG---CK   82 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~---~d   82 (278)
                      .+.|+.|++||+.-+||++++.+|.+.|. .|++..|++.....+.+...   .-+..+.+|+.+.+.+.+.+..   +|
T Consensus         4 ~laG~~vlvTgagaGIG~~~v~~La~aGA-~ViAvaR~~a~L~sLV~e~p---~~I~Pi~~Dls~wea~~~~l~~v~pid   79 (245)
T KOG1207|consen    4 SLAGVIVLVTGAGAGIGKEIVLSLAKAGA-QVIAVARNEANLLSLVKETP---SLIIPIVGDLSAWEALFKLLVPVFPID   79 (245)
T ss_pred             cccceEEEeecccccccHHHHHHHHhcCC-EEEEEecCHHHHHHHHhhCC---cceeeeEecccHHHHHHHhhcccCchh
Confidence            35789999999999999999999999999 99999998876555433211   1477889999998888888764   59


Q ss_pred             EEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHHHh-----cCCCEEEEecceeeeecCCCCCCccccCCCCCc
Q 023689           83 GVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKR-----FGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (278)
Q Consensus        83 ~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~-----~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~  153 (278)
                      .++|+||+...    +...++.+..|++|+.+..++.+...+     +-.+.+|++||.+...+..+.            
T Consensus        80 gLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~nH------------  147 (245)
T KOG1207|consen   80 GLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDNH------------  147 (245)
T ss_pred             hhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCCc------------
Confidence            99999986432    233456788899999988887776433     224569999998876554332            


Q ss_pred             hhhhhccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHHH
Q 023689          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKD  233 (278)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  233 (278)
                      ..||+.+...-..+|.++-++-     ...++++.+.|..+.+...+...+ .+.--..++...|      ...|..+++
T Consensus       148 tvYcatKaALDmlTk~lAlELG-----p~kIRVNsVNPTVVmT~MG~dnWS-DP~K~k~mL~riP------l~rFaEV~e  215 (245)
T KOG1207|consen  148 TVYCATKAALDMLTKCLALELG-----PQKIRVNSVNPTVVMTDMGRDNWS-DPDKKKKMLDRIP------LKRFAEVDE  215 (245)
T ss_pred             eEEeecHHHHHHHHHHHHHhhC-----cceeEeeccCCeEEEecccccccC-CchhccchhhhCc------hhhhhHHHH
Confidence            2244444444444444444433     457999999999999876543311 1222233333333      456788999


Q ss_pred             HHHHHHhhhcCCCC
Q 023689          234 VAKAQVLLFESPAA  247 (278)
Q Consensus       234 ~a~~~~~~~~~~~~  247 (278)
                      +..++.+++.+.+.
T Consensus       216 VVnA~lfLLSd~ss  229 (245)
T KOG1207|consen  216 VVNAVLFLLSDNSS  229 (245)
T ss_pred             HHhhheeeeecCcC
Confidence            99999999876543

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.70  E-value=2.8e-16  Score=127.89  Aligned_cols=173  Identities=20%  Similarity=0.172  Sum_probs=123.7

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCC--CcccccCCCCCC-CceEEEEccCCC-hhhHHHHhc---
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD--SSHLFALPGAGD-ANLRVFEADVLD-SGAVSRAVE---   79 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~--~~~~~~~~~~~~-~~v~~~~~Dl~d-~~~~~~~~~---   79 (278)
                      +++|++|||||+++||..+++.|.+.|+ .|++..++...  .+.......... ..+.+..+|+++ .++++.+++   
T Consensus         3 ~~~~~ilITGas~GiG~aia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~   81 (251)
T COG1028           3 LSGKVALVTGASSGIGRAIARALAREGA-RVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAE   81 (251)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-eEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHH
Confidence            5678999999999999999999999999 76666665443  111111110111 267788899998 877776664   


Q ss_pred             ----CccEEEEecccCCC-----CCCCCchhhhhhhHHhHHHHHHHHHHhcC-CCEEEEecceeeeecCCCCCCccccCC
Q 023689           80 ----GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAKRFG-VRRVVVTSSISAIVPNPGWKGKVFDET  149 (278)
Q Consensus        80 ----~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~E~  149 (278)
                          .+|+++|+||....     +...+.++..+++|+.+...+.+++...- .+++|++||..+. ..+..        
T Consensus        82 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~-~~~~~--------  152 (251)
T COG1028          82 EEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGL-GGPPG--------  152 (251)
T ss_pred             HHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhc-CCCCC--------
Confidence                47999999997542     23345789999999999888888443221 1189999997775 43220        


Q ss_pred             CCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCC
Q 023689          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQ  200 (278)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~  200 (278)
                                 ...|+.||.+.+.+.+.++.+   +|++++.+.||.+-++...
T Consensus       153 -----------~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~~~  195 (251)
T COG1028         153 -----------QAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPMTA  195 (251)
T ss_pred             -----------cchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcchh
Confidence                       146899999888877777743   6899999999977766543

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.70  E-value=6.4e-16  Score=125.01  Aligned_cols=207  Identities=14%  Similarity=0.082  Sum_probs=135.6

Q ss_pred             HHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc----CccEEEEecccCCCCCCCCch
Q 023689           25 LVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----GCKGVFHVASPCTLEDPVDPE  100 (278)
Q Consensus        25 l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~----~~d~vi~~a~~~~~~~~~~~~  100 (278)
                      ++++|+++|+ +|++.+|+.+...           ..+++++|++|.++++++++    ++|+|||+||...    ..++
T Consensus         1 ~a~~l~~~G~-~Vv~~~r~~~~~~-----------~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~----~~~~   64 (241)
T PRK12428          1 TARLLRFLGA-RVIGVDRREPGMT-----------LDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPG----TAPV   64 (241)
T ss_pred             ChHHHHhCCC-EEEEEeCCcchhh-----------hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCC----CCCH
Confidence            4788999999 8888888764321           23467899999999998886    5899999998753    2467


Q ss_pred             hhhhhhHHhHHHHHHHHHHhc--CCCEEEEecceeeeecCCCCCCccccCC----CCCch--h----hhhccCchhhhHH
Q 023689          101 KELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDET----SWTDL--E----YCKSRKKWYPVSK  168 (278)
Q Consensus       101 ~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~E~----~~~~~--~----~~~~~~~~y~~sK  168 (278)
                      +..+++|+.++..+++++.+.  ..++||++||.+++.....   .+..|.    .....  .    ........|+.+|
T Consensus        65 ~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK  141 (241)
T PRK12428         65 ELVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQR---LELHKALAATASFDEGAAWLAAHPVALATGYQLSK  141 (241)
T ss_pred             HHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccc---hHHHHhhhccchHHHHHHhhhccCCCcccHHHHHH
Confidence            899999999999999988653  2368999999877532111   111110    00000  0    0112236799999


Q ss_pred             HHHHHHHHHHH----HhcCCceEEEecceeeCCCCCCCCchh-HHHHHHHhhCCCCcccccccCcccHHHHHHHHHhhhc
Q 023689          169 TLAEKAAWEFA----EKHGVDVVAIHPATCLGPLMQPYLNAS-CAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFE  243 (278)
Q Consensus       169 ~~~e~~~~~~~----~~~~~~~~~lrp~~i~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  243 (278)
                      .+.+.+.+.++    ..+|+++++++||.+.++......... .....   ..   ..  ....+..++|+|+++++++.
T Consensus       142 ~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~~~~~~~~---~~---~~--~~~~~~~pe~va~~~~~l~s  213 (241)
T PRK12428        142 EALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLGQERVD---SD---AK--RMGRPATADEQAAVLVFLCS  213 (241)
T ss_pred             HHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccchhhhhhHhhh---hc---cc--ccCCCCCHHHHHHHHHHHcC
Confidence            99998888777    345899999999999998643221110 00000   00   00  12345789999999999875


Q ss_pred             CCC--CCceEEecCccc
Q 023689          244 SPA--ASGRYLCTNGIY  258 (278)
Q Consensus       244 ~~~--~~~~~~~~~~~~  258 (278)
                      ...  ..|..+..++.+
T Consensus       214 ~~~~~~~G~~i~vdgg~  230 (241)
T PRK12428        214 DAARWINGVNLPVDGGL  230 (241)
T ss_pred             hhhcCccCcEEEecCch
Confidence            432  235544444443

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.68  E-value=3.3e-16  Score=118.10  Aligned_cols=165  Identities=20%  Similarity=0.221  Sum_probs=126.5

Q ss_pred             CceEEEeCc-chhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc-------
Q 023689            9 EETVCVTGA-NGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (278)
Q Consensus         9 ~~~vlItGa-tG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------   79 (278)
                      .|+|||||+ +|+||.+|++.+.++|+ .|++..|+.+.-..+. ..      ++...+.|+++++++.+...       
T Consensus         7 ~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~------gl~~~kLDV~~~~~V~~v~~evr~~~~   79 (289)
T KOG1209|consen    7 PKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQF------GLKPYKLDVSKPEEVVTVSGEVRANPD   79 (289)
T ss_pred             CCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhh------CCeeEEeccCChHHHHHHHHHHhhCCC
Confidence            478999886 58999999999999999 9999999877655544 22      78889999999998887753       


Q ss_pred             -CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHH----hcCCCEEEEecceeeeecCCCCCCccccCCC
Q 023689           80 -GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (278)
Q Consensus        80 -~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~  150 (278)
                       +.|.++|+||.....    .....-+..+++|+.|..++.++..    +.. +.+|+++|..++-+.+..         
T Consensus        80 Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaK-GtIVnvgSl~~~vpfpf~---------  149 (289)
T KOG1209|consen   80 GKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAK-GTIVNVGSLAGVVPFPFG---------  149 (289)
T ss_pred             CceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHcc-ceEEEecceeEEeccchh---------
Confidence             369999999975542    2223447889999888766666553    333 579999998887665542         


Q ss_pred             CCchhhhhccCchhhhHHHHHHHHHHHHH---HhcCCceEEEecceeeCCCCCC
Q 023689          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFA---EKHGVDVVAIHPATCLGPLMQP  201 (278)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~---~~~~~~~~~lrp~~i~g~~~~~  201 (278)
                                 +.|..||++.-.+.+.+.   +.+|++++.+-+|.|-+...+.
T Consensus       150 -----------~iYsAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T~Ia~k  192 (289)
T KOG1209|consen  150 -----------SIYSASKAAIHAYARTLRLELKPFGVRVINAITGGVATDIADK  192 (289)
T ss_pred             -----------hhhhHHHHHHHHhhhhcEEeeeccccEEEEecccceecccccC
Confidence                       679999998877765544   2459999999999998887655

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.68  E-value=3.3e-16  Score=120.81  Aligned_cols=161  Identities=24%  Similarity=0.308  Sum_probs=115.0

Q ss_pred             eEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCC-CCC---cccccCCCCCCCceEEEEccCCChhhHHHHhc-------
Q 023689           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG-SDS---SHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (278)
Q Consensus        11 ~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~-~~~---~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------   79 (278)
                      ++|||||+|.||..+++.|.++|...++++.|+. ...   ..+..+...+. ++..+.+|++|++++.++++       
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~-~v~~~~~Dv~d~~~v~~~~~~~~~~~~   80 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGA-RVEYVQCDVTDPEAVAAALAQLRQRFG   80 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT--EEEEEE--TTSHHHHHHHHHTSHTTSS
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCC-ceeeeccCccCHHHHHHHHHHHHhccC
Confidence            6899999999999999999999987899998883 222   12223322222 89999999999999999985       


Q ss_pred             CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchh
Q 023689           80 GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLE  155 (278)
Q Consensus        80 ~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~  155 (278)
                      .++.|||+|+.....    ...+..+..+..-+.|+.+|.++.....+..||++||+++..+.++.              
T Consensus        81 ~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~G~~gq--------------  146 (181)
T PF08659_consen   81 PIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLLGGPGQ--------------  146 (181)
T ss_dssp             -EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHTT-TTB--------------
T ss_pred             CcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhccCcch--------------
Confidence            358999999875431    12234466677779999999999988889999999999998877663              


Q ss_pred             hhhccCchhhhHHHHHHHHHHHHHHhcCCceEEEecce
Q 023689          156 YCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPAT  193 (278)
Q Consensus       156 ~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~  193 (278)
                            ..|+..-...+.+..... ..|.++.+|..+.
T Consensus       147 ------~~YaaAN~~lda~a~~~~-~~g~~~~sI~wg~  177 (181)
T PF08659_consen  147 ------SAYAAANAFLDALARQRR-SRGLPAVSINWGA  177 (181)
T ss_dssp             ------HHHHHHHHHHHHHHHHHH-HTTSEEEEEEE-E
T ss_pred             ------HhHHHHHHHHHHHHHHHH-hCCCCEEEEEccc
Confidence                  579888888888776554 5689988888654

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=99.66  E-value=1.4e-15  Score=116.05  Aligned_cols=217  Identities=18%  Similarity=0.122  Sum_probs=157.3

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEecc
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a~   89 (278)
                      -+.++.|+.||.|+++++.....++ .|-.+.|+.. ...+..+.+    .+.|.++|.....-+.....++..++-+++
T Consensus        53 e~tlvlggnpfsgs~vlk~A~~vv~-svgilsen~~-k~~l~sw~~----~vswh~gnsfssn~~k~~l~g~t~v~e~~g  126 (283)
T KOG4288|consen   53 EWTLVLGGNPFSGSEVLKNATNVVH-SVGILSENEN-KQTLSSWPT----YVSWHRGNSFSSNPNKLKLSGPTFVYEMMG  126 (283)
T ss_pred             HHHhhhcCCCcchHHHHHHHHhhce-eeeEeecccC-cchhhCCCc----ccchhhccccccCcchhhhcCCcccHHHhc
Confidence            3689999999999999999999999 8888888765 333344433    788999999988888888888888888876


Q ss_pred             cCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhhHHH
Q 023689           90 PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKT  169 (278)
Q Consensus        90 ~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~  169 (278)
                      ..      .....+..+|-....+..+++++.|+++|+|+|- ..+...+..            +       ..|-.+|+
T Consensus       127 gf------gn~~~m~~ing~ani~a~kaa~~~gv~~fvyISa-~d~~~~~~i------------~-------rGY~~gKR  180 (283)
T KOG4288|consen  127 GF------GNIILMDRINGTANINAVKAAAKAGVPRFVYISA-HDFGLPPLI------------P-------RGYIEGKR  180 (283)
T ss_pred             Cc------cchHHHHHhccHhhHHHHHHHHHcCCceEEEEEh-hhcCCCCcc------------c-------hhhhccch
Confidence            53      3456778888888889999999999999999994 332221111            1       36999999


Q ss_pred             HHHHHHHHHHHhcCCceEEEecceeeCCCCCCCC----chhHHHHHHHhhCC------CCcccccccCcccHHHHHHHHH
Q 023689          170 LAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL----NASCAVLQQLLQGS------KDTQEYHWLGAVPVKDVAKAQV  239 (278)
Q Consensus       170 ~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~----~~~~~~~~~~~~~~------~~~~~~~~~~~i~~~D~a~~~~  239 (278)
                      .+|.-+.+   .++.+-.++|||++||.+.-...    ......+.......      .+..+.-..+.+.++++|.+.+
T Consensus       181 ~AE~Ell~---~~~~rgiilRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~VA~aal  257 (283)
T KOG4288|consen  181 EAEAELLK---KFRFRGIILRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVESVALAAL  257 (283)
T ss_pred             HHHHHHHH---hcCCCceeeccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHHHHHHHH
Confidence            99965543   56799999999999998543221    12222222222222      2223446788999999999999


Q ss_pred             hhhcCCCCCceEEecCccccHHHHHHHHH
Q 023689          240 LLFESPAASGRYLCTNGIYQFGDFAERVS  268 (278)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~s~~e~~~~i~  268 (278)
                      .+++++...|+       +++.|+.+.-.
T Consensus       258 ~ai~dp~f~Gv-------v~i~eI~~~a~  279 (283)
T KOG4288|consen  258 KAIEDPDFKGV-------VTIEEIKKAAH  279 (283)
T ss_pred             HhccCCCcCce-------eeHHHHHHHHH
Confidence            99999877653       45666555433

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.66  E-value=3.6e-15  Score=119.34  Aligned_cols=205  Identities=21%  Similarity=0.175  Sum_probs=147.1

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCC--CceEEEEccCCChhhHHHHhcC-------
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGD--ANLRVFEADVLDSGAVSRAVEG-------   80 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~--~~v~~~~~Dl~d~~~~~~~~~~-------   80 (278)
                      .+|+|||||.++|..++..+..+|+ +|.+..|+..+...+++..+...  ..+.+..+|+.|++++...++.       
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga-~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~  112 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGA-DVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGP  112 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccC-ceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCC
Confidence            5899999999999999999999999 99999998776554443222111  1366888999999998888763       


Q ss_pred             ccEEEEecccCCCCC----CCCchhhhhhhHHhHHHHHHHHHHhc-----CCCEEEEecceeeeecCCCCCCccccCCCC
Q 023689           81 CKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKRF-----GVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (278)
Q Consensus        81 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~~-----~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~  151 (278)
                      +|.+|+|||......    .....+...++|..|+.++++++...     +.++|+.+||..+..+..+.          
T Consensus       113 ~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~Gy----------  182 (331)
T KOG1210|consen  113 IDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGY----------  182 (331)
T ss_pred             cceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcccc----------
Confidence            599999999755522    22345788999999999998877332     24589999998887776552          


Q ss_pred             CchhhhhccCchhhhHHHHHHHHHHHHHH---hcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcc--ccccc
Q 023689          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ--EYHWL  226 (278)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  226 (278)
                                +.|..+|.+..-+.....+   ++++.++...|+.+.+|+-..-           ..-+|...  -...-
T Consensus       183 ----------saYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~E-----------n~tkP~~t~ii~g~s  241 (331)
T KOG1210|consen  183 ----------SAYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERE-----------NKTKPEETKIIEGGS  241 (331)
T ss_pred             ----------cccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCccccc-----------cccCchheeeecCCC
Confidence                      5677777666555444443   5699999999999999852211           01111111  12345


Q ss_pred             CcccHHHHHHHHHhhhcCCC
Q 023689          227 GAVPVKDVAKAQVLLFESPA  246 (278)
Q Consensus       227 ~~i~~~D~a~~~~~~~~~~~  246 (278)
                      +.+..+++|++++.-+.+..
T Consensus       242 s~~~~e~~a~~~~~~~~rg~  261 (331)
T KOG1210|consen  242 SVIKCEEMAKAIVKGMKRGN  261 (331)
T ss_pred             CCcCHHHHHHHHHhHHhhcC
Confidence            56899999999988887654

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.66  E-value=1.2e-15  Score=153.75  Aligned_cols=169  Identities=21%  Similarity=0.208  Sum_probs=132.8

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHC-CCCeEEEEecCCCCCc--------------------------------------
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPGSDSS--------------------------------------   48 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~-g~~~v~~~~r~~~~~~--------------------------------------   48 (278)
                      +++++|||||+++||..++++|.++ |+ .|+++.|++....                                      
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga-~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~ 2074 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQA-HFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVR 2074 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCC-EEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhccc
Confidence            4689999999999999999999998 57 8888888721000                                      


Q ss_pred             ----------ccccCCCCCCCceEEEEccCCChhhHHHHhc------CccEEEEecccCCC----CCCCCchhhhhhhHH
Q 023689           49 ----------HLFALPGAGDANLRVFEADVLDSGAVSRAVE------GCKGVFHVASPCTL----EDPVDPEKELILPAV  108 (278)
Q Consensus        49 ----------~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~------~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~  108 (278)
                                .+..+...+ ..+.++.+|++|.+++.++++      ++|+|||+||....    +...++++..+++|+
T Consensus      2075 ~~~~~~ei~~~la~l~~~G-~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv 2153 (2582)
T TIGR02813      2075 PVLSSLEIAQALAAFKAAG-ASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKV 2153 (2582)
T ss_pred             ccchhHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHH
Confidence                      000011111 268899999999999888875      47999999997543    223457788999999


Q ss_pred             hHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc-CCceE
Q 023689          109 QGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH-GVDVV  187 (278)
Q Consensus       109 ~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~-~~~~~  187 (278)
                      .|+.++++++.....++||++||..++++..+.                    ..|+.+|...+.+...++.+. +++++
T Consensus      2154 ~G~~~Ll~al~~~~~~~IV~~SSvag~~G~~gq--------------------s~YaaAkaaL~~la~~la~~~~~irV~ 2213 (2582)
T TIGR02813      2154 DGLLSLLAALNAENIKLLALFSSAAGFYGNTGQ--------------------SDYAMSNDILNKAALQLKALNPSAKVM 2213 (2582)
T ss_pred             HHHHHHHHHHHHhCCCeEEEEechhhcCCCCCc--------------------HHHHHHHHHHHHHHHHHHHHcCCcEEE
Confidence            999999999988777889999999988776553                    579999999888888877665 78999


Q ss_pred             EEecceeeCCC
Q 023689          188 AIHPATCLGPL  198 (278)
Q Consensus       188 ~lrp~~i~g~~  198 (278)
                      ++.||.+-|+.
T Consensus      2214 sI~wG~wdtgm 2224 (2582)
T TIGR02813      2214 SFNWGPWDGGM 2224 (2582)
T ss_pred             EEECCeecCCc
Confidence            99999987764

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.62  E-value=3.7e-15  Score=113.75  Aligned_cols=215  Identities=19%  Similarity=0.112  Sum_probs=142.3

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc------
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~------   79 (278)
                      ....+.+|+||+|.+||..++..+..++.+.++.. ++....+ ++.+.-..........+|++....+.+..+      
T Consensus         3 ~~~r~villTGaSrgiG~~~v~~i~aed~e~~r~g-~~r~~a~-~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~   80 (253)
T KOG1204|consen    3 LNMRKVILLTGASRGIGTGSVATILAEDDEALRYG-VARLLAE-LEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKG   80 (253)
T ss_pred             cccceEEEEecCCCCccHHHHHHHHhcchHHHHHh-hhccccc-ccceEEEecCCcceechHHHHHHHHHHHHhhhhhcC
Confidence            34457899999999999999999998876333222 2222222 221100000022233455555443333332      


Q ss_pred             -CccEEEEecccCCC-------CCCCCchhhhhhhHHhHHHHHHHHHHh----cC-CCEEEEecceeeeecCCCCCCccc
Q 023689           80 -GCKGVFHVASPCTL-------EDPVDPEKELILPAVQGTLNVLEAAKR----FG-VRRVVVTSSISAIVPNPGWKGKVF  146 (278)
Q Consensus        80 -~~d~vi~~a~~~~~-------~~~~~~~~~~~~~n~~~~~~ll~~~~~----~~-~~~~v~~Ss~~~~~~~~~~~~~~~  146 (278)
                       +-|+||||||....       ....+.|..+|+.|+.....|...+.+    .. .+.+|++||.+++.+...+     
T Consensus        81 gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~w-----  155 (253)
T KOG1204|consen   81 GKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSSW-----  155 (253)
T ss_pred             CceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccHH-----
Confidence             35999999997554       223467899999999888887776643    22 3679999998888776654     


Q ss_pred             cCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc--CCceEEEecceeeCCCCCCC------CchhHHHHHHHhhCCC
Q 023689          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQPY------LNASCAVLQQLLQGSK  218 (278)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~~~~~~lrp~~i~g~~~~~~------~~~~~~~~~~~~~~~~  218 (278)
                                     +.|..+|++-+.+.+.++.+.  ++.+..++||.+-++.....      .+.....++++..   
T Consensus       156 ---------------a~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~---  217 (253)
T KOG1204|consen  156 ---------------AAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKE---  217 (253)
T ss_pred             ---------------HHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHHh---
Confidence                           789999999999999888654  89999999999998864322      1122333333333   


Q ss_pred             CcccccccCcccHHHHHHHHHhhhcCC-CCCceE
Q 023689          219 DTQEYHWLGAVPVKDVAKAQVLLFESP-AASGRY  251 (278)
Q Consensus       219 ~~~~~~~~~~i~~~D~a~~~~~~~~~~-~~~~~~  251 (278)
                            .-+++++.+.|+.+..++++. ...|.|
T Consensus       218 ------~~~ll~~~~~a~~l~~L~e~~~f~sG~~  245 (253)
T KOG1204|consen  218 ------SGQLLDPQVTAKVLAKLLEKGDFVSGQH  245 (253)
T ss_pred             ------cCCcCChhhHHHHHHHHHHhcCcccccc
Confidence                  345678899999999998876 444543

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=99.62  E-value=4.9e-14  Score=118.53  Aligned_cols=212  Identities=25%  Similarity=0.171  Sum_probs=133.6

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCCh-hhHHHHhcC----c
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS-GAVSRAVEG----C   81 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~-~~~~~~~~~----~   81 (278)
                      .++++|||+||||.+|+-+++.|+++|+ .|.+++|+......+..... .+....-+..|.... +.+....+.    .
T Consensus        77 ~~~~~VlVvGatG~vG~~iv~~llkrgf-~vra~VRd~~~a~~~~~~~~-~d~~~~~v~~~~~~~~d~~~~~~~~~~~~~  154 (411)
T KOG1203|consen   77 KKPTTVLVVGATGKVGRRIVKILLKRGF-SVRALVRDEQKAEDLLGVFF-VDLGLQNVEADVVTAIDILKKLVEAVPKGV  154 (411)
T ss_pred             CCCCeEEEecCCCchhHHHHHHHHHCCC-eeeeeccChhhhhhhhcccc-cccccceeeeccccccchhhhhhhhccccc
Confidence            3457999999999999999999999998 99999998877666543111 111344444444443 333333332    3


Q ss_pred             cEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccC
Q 023689           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRK  161 (278)
Q Consensus        82 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  161 (278)
                      .+++-+++.....  + +...-+.+...|+.++++||+..|+++++++||+..--.....            +..  .-.
T Consensus       155 ~~v~~~~ggrp~~--e-d~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~~~~~~~------------~~~--~~~  217 (411)
T KOG1203|consen  155 VIVIKGAGGRPEE--E-DIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGTKFNQPP------------NIL--LLN  217 (411)
T ss_pred             eeEEecccCCCCc--c-cCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCcccCCCc------------hhh--hhh
Confidence            4566665543321  1 2334456778999999999999999999999886553222110            000  001


Q ss_pred             chhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcc-cccccCcccHHHHHHHHHh
Q 023689          162 KWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ-EYHWLGAVPVKDVAKAQVL  240 (278)
Q Consensus       162 ~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~D~a~~~~~  240 (278)
                      ..+-.+|..+|+.++    ++|+++++|||+...-+.......        .....+... .+..--.+.-.|+|+.++.
T Consensus       218 ~~~~~~k~~~e~~~~----~Sgl~ytiIR~g~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~i~r~~vael~~~  285 (411)
T KOG1203|consen  218 GLVLKAKLKAEKFLQ----DSGLPYTIIRPGGLEQDTGGQREV--------VVDDEKELLTVDGGAYSISRLDVAELVAK  285 (411)
T ss_pred             hhhhHHHHhHHHHHH----hcCCCcEEEeccccccCCCCccee--------cccCccccccccccceeeehhhHHHHHHH
Confidence            235577888887775    789999999999776543322100        000111111 1111136788999999999


Q ss_pred             hhcCCCCCc
Q 023689          241 LFESPAASG  249 (278)
Q Consensus       241 ~~~~~~~~~  249 (278)
                      ++.+....+
T Consensus       286 all~~~~~~  294 (411)
T KOG1203|consen  286 ALLNEAATF  294 (411)
T ss_pred             HHhhhhhcc
Confidence            998877655

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.58  E-value=6.2e-15  Score=107.64  Aligned_cols=216  Identities=19%  Similarity=0.191  Sum_probs=152.2

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccc-ccCCCCCCCceEEEEccCCChhhHHHHhc------
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL-FALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~-~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~------   79 (278)
                      .++-..|||||.+++|+..+++|.+.|. .|..++...++.... +++.+    ++.|...|++++++++.++.      
T Consensus         7 ~kglvalvtggasglg~ataerlakqga-sv~lldlp~skg~~vakelg~----~~vf~padvtsekdv~aala~ak~kf   81 (260)
T KOG1199|consen    7 TKGLVALVTGGASGLGKATAERLAKQGA-SVALLDLPQSKGADVAKELGG----KVVFTPADVTSEKDVRAALAKAKAKF   81 (260)
T ss_pred             hcCeeEEeecCcccccHHHHHHHHhcCc-eEEEEeCCcccchHHHHHhCC----ceEEeccccCcHHHHHHHHHHHHhhc
Confidence            3456899999999999999999999999 888888766654443 33322    89999999999999998875      


Q ss_pred             -CccEEEEecccCCCC----------CCCCchhhhhhhHHhHHHHHHHHHHh--------c-C-CCEEEEecceeeeecC
Q 023689           80 -GCKGVFHVASPCTLE----------DPVDPEKELILPAVQGTLNVLEAAKR--------F-G-VRRVVVTSSISAIVPN  138 (278)
Q Consensus        80 -~~d~vi~~a~~~~~~----------~~~~~~~~~~~~n~~~~~~ll~~~~~--------~-~-~~~~v~~Ss~~~~~~~  138 (278)
                       ..|..+||||.....          ....+....+++|+.||.|+++....        + | -+.+|++.|.+++.++
T Consensus        82 grld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq  161 (260)
T KOG1199|consen   82 GRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQ  161 (260)
T ss_pred             cceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCc
Confidence             469999999865431          11235577899999999999886521        1 1 2348888888888776


Q ss_pred             CCCCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCC
Q 023689          139 PGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSK  218 (278)
Q Consensus       139 ~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~  218 (278)
                      .+.            ..|.+++....|.+--.+..+.     ..|++++.+-||.+-+|.....    +.-.+.++....
T Consensus       162 ~gq------------aaysaskgaivgmtlpiardla-----~~gir~~tiapglf~tpllssl----pekv~~fla~~i  220 (260)
T KOG1199|consen  162 TGQ------------AAYSASKGAIVGMTLPIARDLA-----GDGIRFNTIAPGLFDTPLLSSL----PEKVKSFLAQLI  220 (260)
T ss_pred             cch------------hhhhcccCceEeeechhhhhcc-----cCceEEEeecccccCChhhhhh----hHHHHHHHHHhC
Confidence            653            3355555555555544444443     5699999999999888875443    333333333221


Q ss_pred             CcccccccCcccHHHHHHHHHhhhcCCCCCceEE
Q 023689          219 DTQEYHWLGAVPVKDVAKAQVLLFESPAASGRYL  252 (278)
Q Consensus       219 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~  252 (278)
                      + +   ...+-|+.+.+..+..+++++--.|..+
T Consensus       221 p-f---psrlg~p~eyahlvqaiienp~lngevi  250 (260)
T KOG1199|consen  221 P-F---PSRLGHPHEYAHLVQAIIENPYLNGEVI  250 (260)
T ss_pred             C-C---chhcCChHHHHHHHHHHHhCcccCCeEE
Confidence            1 1   2345688999999999999987666433

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.53  E-value=4.4e-14  Score=113.36  Aligned_cols=171  Identities=13%  Similarity=0.137  Sum_probs=126.7

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCCCCCCceEEEEccCCChhh----HHHHhcC--c
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGA----VSRAVEG--C   81 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~~~~Dl~d~~~----~~~~~~~--~   81 (278)
                      +.-+.|||||.+||++.+++|.++|. +|+++.|+.++.+.+++ +.+..+..++++..|.++.+.    +.+.+.+  +
T Consensus        49 g~WAVVTGaTDGIGKayA~eLAkrG~-nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~V  127 (312)
T KOG1014|consen   49 GSWAVVTGATDGIGKAYARELAKRGF-NVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDV  127 (312)
T ss_pred             CCEEEEECCCCcchHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCce
Confidence            46799999999999999999999999 89999999887666543 332222478999999998775    4444454  5


Q ss_pred             cEEEEecccCCC------CCCCCchhhhhhhHHhHHHHHH----HHHHhcCCCEEEEecceeeeecCCCCCCccccCCCC
Q 023689           82 KGVFHVASPCTL------EDPVDPEKELILPAVQGTLNVL----EAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (278)
Q Consensus        82 d~vi~~a~~~~~------~~~~~~~~~~~~~n~~~~~~ll----~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~  151 (278)
                      -++|||+|....      +...+.....+.+|+.++..+.    ..+.+.+-+-+|++||.++.-+.+.+          
T Consensus       128 gILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~----------  197 (312)
T KOG1014|consen  128 GILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLL----------  197 (312)
T ss_pred             EEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhH----------
Confidence            679999997663      1122244677888877655444    44555556679999998887665543          


Q ss_pred             CchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCC
Q 023689          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQ  200 (278)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~  200 (278)
                                +.|+.||...+.+-..+.++   +|+.+-.+-|..|-++...
T Consensus       198 ----------s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~  239 (312)
T KOG1014|consen  198 ----------SVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAK  239 (312)
T ss_pred             ----------HHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheeccccc
Confidence                      67999998777665555544   4999999999999988643

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=99.48  E-value=1.2e-12  Score=96.10  Aligned_cols=161  Identities=18%  Similarity=0.165  Sum_probs=119.1

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCC-CeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      .+||..+|.||||-.|+.|++.+++.+. ..|+++.|+....+....       .+.....|....+++.....++|+.|
T Consensus        16 mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at~k-------~v~q~~vDf~Kl~~~a~~~qg~dV~F   88 (238)
T KOG4039|consen   16 MQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPATDK-------VVAQVEVDFSKLSQLATNEQGPDVLF   88 (238)
T ss_pred             hhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccccc-------eeeeEEechHHHHHHHhhhcCCceEE
Confidence            3578999999999999999999999874 577777765422211111       67778899988899999999999999


Q ss_pred             EecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhh
Q 023689           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYP  165 (278)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~  165 (278)
                      .+-|-....   ...+-++.++-.-...+.+++++.|+++|+.+||..+. +..                     .-.|-
T Consensus        89 caLgTTRgk---aGadgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GAd-~sS---------------------rFlY~  143 (238)
T KOG4039|consen   89 CALGTTRGK---AGADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGAD-PSS---------------------RFLYM  143 (238)
T ss_pred             Eeecccccc---cccCceEeechHHHHHHHHHHHhCCCeEEEEEeccCCC-ccc---------------------ceeee
Confidence            776654432   22456677777778889999999999999999995542 111                     13588


Q ss_pred             hHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCC
Q 023689          166 VSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY  202 (278)
Q Consensus       166 ~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~  202 (278)
                      ..|-..|.-+.++.   --.+.++|||.+.|.+....
T Consensus       144 k~KGEvE~~v~eL~---F~~~~i~RPG~ll~~R~esr  177 (238)
T KOG4039|consen  144 KMKGEVERDVIELD---FKHIIILRPGPLLGERTESR  177 (238)
T ss_pred             eccchhhhhhhhcc---ccEEEEecCcceeccccccc
Confidence            88888887665432   34688999999999876543

>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]

Probab=99.46  E-value=1.2e-12  Score=100.03  Aligned_cols=232  Identities=14%  Similarity=0.112  Sum_probs=147.7

Q ss_pred             CceEEEeCcchhhHHHHHH-----HHHHCC----CCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc
Q 023689            9 EETVCVTGANGFIGTWLVK-----TLLDNN----YTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE   79 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~-----~L~~~g----~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~   79 (278)
                      .++.++-+++|+|+..|..     ++-+.+    | .|+.+.|.+.....            +|-+.|....-      -
T Consensus        12 sr~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h-~vtv~sR~pg~~ri------------tw~el~~~Gip------~   72 (315)
T KOG3019|consen   12 SRDAVSNWSNGIIRENLGSETSCCHDTNVHSADNH-AVTVLSRSPGKARI------------TWPELDFPGIP------I   72 (315)
T ss_pred             cccCCCCccccchhccccCcccccccCCCCccccc-ceEEEecCCCCccc------------ccchhcCCCCc------e
Confidence            4678999999999988876     333333    5 89999998765433            23223322211      1


Q ss_pred             CccEEEEecccCCCCCCCCchhhhhhhH-----HhHHHHHHHHHHhcC--CCEEEEecceeeeecCCCCCCccccCCCCC
Q 023689           80 GCKGVFHVASPCTLEDPVDPEKELILPA-----VQGTLNVLEAAKRFG--VRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (278)
Q Consensus        80 ~~d~vi~~a~~~~~~~~~~~~~~~~~~n-----~~~~~~ll~~~~~~~--~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~  152 (278)
                      .|+..++.++..... ...-|..-|+-|     +..+..|.++..+..  .+.+|++|..+ +|....  ...++|+++.
T Consensus        73 sc~a~vna~g~n~l~-P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva-~y~pS~--s~eY~e~~~~  148 (315)
T KOG3019|consen   73 SCVAGVNAVGNNALL-PIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVA-VYVPSE--SQEYSEKIVH  148 (315)
T ss_pred             ehHHHHhhhhhhccC-chhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeE-Eecccc--cccccccccc
Confidence            334444444322211 112233334444     556777888887663  45688888644 443322  2556666654


Q ss_pred             chhhhhccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHH
Q 023689          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVK  232 (278)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  232 (278)
                      ..        .--.++...|.-....-....++.+++|.|.|.|.+......  ..+.-++..|.|+..+.++++|||++
T Consensus       149 qg--------fd~~srL~l~WE~aA~~~~~~~r~~~iR~GvVlG~gGGa~~~--M~lpF~~g~GGPlGsG~Q~fpWIHv~  218 (315)
T KOG3019|consen  149 QG--------FDILSRLCLEWEGAALKANKDVRVALIRIGVVLGKGGGALAM--MILPFQMGAGGPLGSGQQWFPWIHVD  218 (315)
T ss_pred             CC--------hHHHHHHHHHHHHHhhccCcceeEEEEEEeEEEecCCcchhh--hhhhhhhccCCcCCCCCeeeeeeehH
Confidence            33        122333333321111111236999999999999987554322  22334678899999999999999999


Q ss_pred             HHHHHHHhhhcCCCCCceEE-ecCccccHHHHHHHHHHhCCC
Q 023689          233 DVAKAQVLLFESPAASGRYL-CTNGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       233 D~a~~~~~~~~~~~~~~~~~-~~~~~~s~~e~~~~i~~~~~~  273 (278)
                      |++..+-.+++++...|+.+ +.+.+.+..|+++.+.+++..
T Consensus       219 DL~~li~~ale~~~v~GViNgvAP~~~~n~Ef~q~lg~aL~R  260 (315)
T KOG3019|consen  219 DLVNLIYEALENPSVKGVINGVAPNPVRNGEFCQQLGSALSR  260 (315)
T ss_pred             HHHHHHHHHHhcCCCCceecccCCCccchHHHHHHHHHHhCC
Confidence            99999999999998888765 568899999999999999854

>PRK06720 hypothetical protein; Provisional

Probab=99.41  E-value=2e-12  Score=98.24  Aligned_cols=128  Identities=11%  Similarity=0.067  Sum_probs=83.1

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccc-ccCCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL-FALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~-~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      .+++|+++||||+|+||+.+++.|.+.|+ .|++..|+.+..... ..+..... ...++.+|+++.+++.++++     
T Consensus        13 ~l~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~v~~~~~~   90 (169)
T PRK06720         13 KLAGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQESGQATVEEITNLGG-EALFVSYDMEKQGDWQRVISITLNA   90 (169)
T ss_pred             ccCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHH
Confidence            35678999999999999999999999999 888888765433221 22211111 56788999999988877653     


Q ss_pred             --CccEEEEecccCCCCCCC-C-chhhhhhhHHhHHHH----HHHHHHhc-------CCCEEEEecceeee
Q 023689           80 --GCKGVFHVASPCTLEDPV-D-PEKELILPAVQGTLN----VLEAAKRF-------GVRRVVVTSSISAI  135 (278)
Q Consensus        80 --~~d~vi~~a~~~~~~~~~-~-~~~~~~~~n~~~~~~----ll~~~~~~-------~~~~~v~~Ss~~~~  135 (278)
                        ++|++||+||........ + ........|+.++..    +...++++       ..++|-.+||.++.
T Consensus        91 ~G~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (169)
T PRK06720         91 FSRIDMLFQNAGLYKIDSIFSRQQENDSNVLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQS  161 (169)
T ss_pred             cCCCCEEEECCCcCCCCCcccccchhHhhceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEecccccc
Confidence              589999999975532211 1 111122444444433    33333333       35678888876653

>PTZ00325 malate dehydrogenase; Provisional

Probab=99.40  E-value=4.6e-12  Score=105.29  Aligned_cols=181  Identities=16%  Similarity=0.093  Sum_probs=123.9

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCC-CeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~v   84 (278)
                      .++|+||.|||++|.||+.++..|...+. .++.+++++......+ .+...   .......+.+|+.++.+.++++|+|
T Consensus         5 ~~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~-Dl~~~---~~~~~v~~~td~~~~~~~l~gaDvV   80 (321)
T PTZ00325          5 ALKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAA-DLSHI---DTPAKVTGYADGELWEKALRGADLV   80 (321)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCccccc-chhhc---CcCceEEEecCCCchHHHhCCCCEE
Confidence            46789999999999999999999986653 4788888732222111 11110   1123345666766667889999999


Q ss_pred             EEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchh
Q 023689           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWY  164 (278)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y  164 (278)
                      |++||....  ....+...+..|+.++.++++++++++++++|+++|.... .........+.+.+..      ++...|
T Consensus        81 VitaG~~~~--~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvd-v~~~~~~~~~~~~sg~------p~~~vi  151 (321)
T PTZ00325         81 LICAGVPRK--PGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVN-STVPIAAETLKKAGVY------DPRKLF  151 (321)
T ss_pred             EECCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHH-HHHHHHHhhhhhccCC------Chhhee
Confidence            999997543  2345788999999999999999999999999999984332 1110000000111111      223568


Q ss_pred             hhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCC
Q 023689          165 PVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQ  200 (278)
Q Consensus       165 ~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~  200 (278)
                      |.+-...-++-...++..+++...++ +.|+|+...
T Consensus       152 G~g~LDs~R~r~~la~~l~v~~~~V~-~~VlGeHGd  186 (321)
T PTZ00325        152 GVTTLDVVRARKFVAEALGMNPYDVN-VPVVGGHSG  186 (321)
T ss_pred             echhHHHHHHHHHHHHHhCcChhheE-EEEEeecCC
Confidence            88755566666667777899999998 899998866

>PLN00106 malate dehydrogenase

Probab=99.30  E-value=5.5e-11  Score=99.02  Aligned_cols=175  Identities=18%  Similarity=0.112  Sum_probs=122.4

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCC-CeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEec
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a   88 (278)
                      +||.|||++|.||+.++..|...+. +++.+++.++.....+ .+...   .......++.+.+++.+.++++|+|||+|
T Consensus        19 ~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~-Dl~~~---~~~~~i~~~~~~~d~~~~l~~aDiVVitA   94 (323)
T PLN00106         19 FKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAA-DVSHI---NTPAQVRGFLGDDQLGDALKGADLVIIPA   94 (323)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEc-hhhhC---CcCceEEEEeCCCCHHHHcCCCCEEEEeC
Confidence            6999999999999999999987664 4788888766222111 11111   11123345555566888999999999999


Q ss_pred             ccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhhHH
Q 023689           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK  168 (278)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK  168 (278)
                      |.....  ...+.+.+..|...+.++.+.+++++...+|+++|.-.....+ .....+...+.      .++...||.++
T Consensus        95 G~~~~~--g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPvD~~~~-i~t~~~~~~s~------~p~~~viG~~~  165 (323)
T PLN00106         95 GVPRKP--GMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPVNSTVP-IAAEVLKKAGV------YDPKKLFGVTT  165 (323)
T ss_pred             CCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCccccHH-HHHHHHHHcCC------CCcceEEEEec
Confidence            985542  3467899999999999999999999999999999833310000 00000111111      12336799999


Q ss_pred             HHHHHHHHHHHHhcCCceEEEecceeeCCC
Q 023689          169 TLAEKAAWEFAEKHGVDVVAIHPATCLGPL  198 (278)
Q Consensus       169 ~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~  198 (278)
                      ...+++-..++++.|++...++ +.|+|+.
T Consensus       166 LDs~Rl~~~lA~~lgv~~~~V~-~~ViGeH  194 (323)
T PLN00106        166 LDVVRANTFVAEKKGLDPADVD-VPVVGGH  194 (323)
T ss_pred             chHHHHHHHHHHHhCCChhheE-EEEEEeC
Confidence            9999999999999999999985 6788876

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=99.29  E-value=3.5e-10  Score=86.94  Aligned_cols=213  Identities=13%  Similarity=0.097  Sum_probs=139.2

Q ss_pred             ccCCceEEEeCcc--hhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc----
Q 023689            6 EKEEETVCVTGAN--GFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (278)
Q Consensus         6 ~~~~~~vlItGat--G~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~----   79 (278)
                      .+++|++||+|-.  .-|+..+++.|.++|. ++...-..+...+.++++-.... ...+++||+++.+++.++++    
T Consensus         3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GA-eL~fTy~~e~l~krv~~la~~~~-s~~v~~cDV~~d~~i~~~f~~i~~   80 (259)
T COG0623           3 LLEGKRILIMGVANNRSIAWGIAKALAEQGA-ELAFTYQGERLEKRVEELAEELG-SDLVLPCDVTNDESIDALFATIKK   80 (259)
T ss_pred             ccCCceEEEEEecccccHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHHHhhcc-CCeEEecCCCCHHHHHHHHHHHHH
Confidence            4679999999975  5799999999999999 77766665544444443322111 34578899999998888875    


Q ss_pred             ---CccEEEEecccCCC--------CCCCCchhhhhhhHHhHHHHHHHHHHhc--CCCEEEEecceeeeecCCCCCCccc
Q 023689           80 ---GCKGVFHVASPCTL--------EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVF  146 (278)
Q Consensus        80 ---~~d~vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~  146 (278)
                         +.|.++|+-+...-        +...+.+...+++-......+.++++..  .-+.+|-+|=    ++..    ..+
T Consensus        81 ~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtY----lgs~----r~v  152 (259)
T COG0623          81 KWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTY----LGSE----RVV  152 (259)
T ss_pred             hhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEe----ccce----eec
Confidence               57999999987553        1122334455555566666677777653  2345555442    2210    111


Q ss_pred             cCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccc
Q 023689          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (278)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (278)
                             |.|     +..|..|..-|.-++.++...   |++++.+..|.|-+-....- ..+..++.......|     
T Consensus       153 -------PnY-----NvMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI-~~f~~~l~~~e~~aP-----  214 (259)
T COG0623         153 -------PNY-----NVMGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGI-GDFRKMLKENEANAP-----  214 (259)
T ss_pred             -------CCC-----chhHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhcc-ccHHHHHHHHHhhCC-----
Confidence                   334     789999999999888888754   78888888765543322221 223444444444444     


Q ss_pred             cccCcccHHHHHHHHHhhhcCCCC
Q 023689          224 HWLGAVPVKDVAKAQVLLFESPAA  247 (278)
Q Consensus       224 ~~~~~i~~~D~a~~~~~~~~~~~~  247 (278)
                       .+..+..+||+...++++..-..
T Consensus       215 -l~r~vt~eeVG~tA~fLlSdLss  237 (259)
T COG0623         215 -LRRNVTIEEVGNTAAFLLSDLSS  237 (259)
T ss_pred             -ccCCCCHHHhhhhHHHHhcchhc
Confidence             45667899999998888876443

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.29  E-value=7.4e-11  Score=91.80  Aligned_cols=181  Identities=20%  Similarity=0.191  Sum_probs=125.9

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCC----eEEEEecCCCCCccc----ccCCCCCCCceEEEEccCCChhhHHHHhc--
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYT----SINATVFPGSDSSHL----FALPGAGDANLRVFEADVLDSGAVSRAVE--   79 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~----~v~~~~r~~~~~~~~----~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--   79 (278)
                      |.+||||+++++|-.+|.+|++...+    .+....|+.++++..    +.+-.+...+++++..|+++..++.++.+  
T Consensus         4 KvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~di   83 (341)
T KOG1478|consen    4 KVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKDI   83 (341)
T ss_pred             eEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHHH
Confidence            67999999999999999999987543    234445666555443    22222233489999999999988777754  


Q ss_pred             -----CccEEEEecccCCCCC-------------------------------CCCchhhhhhhHHhHHHHHHHHHHhc--
Q 023689           80 -----GCKGVFHVASPCTLED-------------------------------PVDPEKELILPAVQGTLNVLEAAKRF--  121 (278)
Q Consensus        80 -----~~d~vi~~a~~~~~~~-------------------------------~~~~~~~~~~~n~~~~~~ll~~~~~~--  121 (278)
                           ..|.|+-+||....+.                               ..++-.+.|++||.|...+++.....  
T Consensus        84 ~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pll~  163 (341)
T KOG1478|consen   84 KQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPLLC  163 (341)
T ss_pred             HHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhHhh
Confidence                 5699999998765421                               12344678999999999888876543  


Q ss_pred             --CCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhc-cCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceee
Q 023689          122 --GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKS-RKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCL  195 (278)
Q Consensus       122 --~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~-~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~  195 (278)
                        ...++|++||..+.-.+...            ....-. ...+|.-||++.+.+..+..+..   |+...++.||...
T Consensus       164 ~~~~~~lvwtSS~~a~kk~lsl------------eD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~t  231 (341)
T KOG1478|consen  164 HSDNPQLVWTSSRMARKKNLSL------------EDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFT  231 (341)
T ss_pred             cCCCCeEEEEeecccccccCCH------------HHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceee
Confidence              23489999997764332221            111111 12479999999998877666543   7888999999888


Q ss_pred             CCCCCCC
Q 023689          196 GPLMQPY  202 (278)
Q Consensus       196 g~~~~~~  202 (278)
                      +......
T Consensus       232 t~~~~~~  238 (341)
T KOG1478|consen  232 TNSFSEY  238 (341)
T ss_pred             cchhhhh
Confidence            7765444

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.26  E-value=1.9e-10  Score=87.90  Aligned_cols=155  Identities=10%  Similarity=0.055  Sum_probs=104.8

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCCCCCCceEEEEccCCChhhHHHHhcC-------c
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVEG-------C   81 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~~-------~   81 (278)
                      |+++|||||||+|. +++.|.+.|+ +|++..|+++....+.. +.. . ..+.++.+|++|++++.++++.       +
T Consensus         1 m~vlVtGGtG~gg~-la~~L~~~G~-~V~v~~R~~~~~~~l~~~l~~-~-~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~i   76 (177)
T PRK08309          1 MHALVIGGTGMLKR-VSLWLCEKGF-HVSVIARREVKLENVKRESTT-P-ESITPLPLDYHDDDALKLAIKSTIEKNGPF   76 (177)
T ss_pred             CEEEEECcCHHHHH-HHHHHHHCcC-EEEEEECCHHHHHHHHHHhhc-C-CcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            57999999988776 9999999999 88888887654433322 211 1 2688899999999999888763       4


Q ss_pred             cEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCC----EEEEecceeeeecCCCCCCccccCCCCCchhhh
Q 023689           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR----RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYC  157 (278)
Q Consensus        82 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~----~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~  157 (278)
                      |.+|+...                  +.++.++..+|++.+++    +|+++=...+..                     
T Consensus        77 d~lv~~vh------------------~~~~~~~~~~~~~~gv~~~~~~~~h~~gs~~~~---------------------  117 (177)
T PRK08309         77 DLAVAWIH------------------SSAKDALSVVCRELDGSSETYRLFHVLGSAASD---------------------  117 (177)
T ss_pred             eEEEEecc------------------ccchhhHHHHHHHHccCCCCceEEEEeCCcCCc---------------------
Confidence            66665533                  33577899999999988    888874322210                     


Q ss_pred             hccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHHHHHHH
Q 023689          158 KSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKA  237 (278)
Q Consensus       158 ~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  237 (278)
                           .    +...+...     ...+.+.-+..|++.-+....                          |+.=+++++.
T Consensus       118 -----~----~~~~~~~~-----~~~~~~~~i~lgf~~~~~~~r--------------------------wlt~~ei~~g  157 (177)
T PRK08309        118 -----P----RIPSEKIG-----PARCSYRRVILGFVLEDTYSR--------------------------WLTHEEISDG  157 (177)
T ss_pred             -----h----hhhhhhhh-----hcCCceEEEEEeEEEeCCccc--------------------------cCchHHHHHH
Confidence                 0    11122222     235677778888887665332                          3455778888


Q ss_pred             HHhhhcCCCC
Q 023689          238 QVLLFESPAA  247 (278)
Q Consensus       238 ~~~~~~~~~~  247 (278)
                      ++.++++..+
T Consensus       158 v~~~~~~~~~  167 (177)
T PRK08309        158 VIKAIESDAD  167 (177)
T ss_pred             HHHHHhcCCC
Confidence            8888876544

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.13  E-value=2.4e-09  Score=90.11  Aligned_cols=173  Identities=16%  Similarity=0.086  Sum_probs=103.6

Q ss_pred             cCCceEEEeCcchhhHHH--HHHHHHHCCCCeEEEEecCCCCCc------------ccc-cCCCCCCCceEEEEccCCCh
Q 023689            7 KEEETVCVTGANGFIGTW--LVKTLLDNNYTSINATVFPGSDSS------------HLF-ALPGAGDANLRVFEADVLDS   71 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~--l~~~L~~~g~~~v~~~~r~~~~~~------------~~~-~~~~~~~~~v~~~~~Dl~d~   71 (278)
                      ..+|++||||+++++|.+  +++.| +.|+ .++++.+..+...            ... .....+ ..+..+.+|++++
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA-~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G-~~a~~i~~DVss~  115 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGA-DTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAG-LYAKSINGDAFSD  115 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCC-eEEEEecCcchhhhcccccccchHHHHHHHHHhcC-CceEEEEcCCCCH
Confidence            346899999999999999  89999 9999 7777764321111            111 111111 1567889999999


Q ss_pred             hhHHHHhc-------CccEEEEecccCCCCCC------------------------------------CCchhhhhhhHH
Q 023689           72 GAVSRAVE-------GCKGVFHVASPCTLEDP------------------------------------VDPEKELILPAV  108 (278)
Q Consensus        72 ~~~~~~~~-------~~d~vi~~a~~~~~~~~------------------------------------~~~~~~~~~~n~  108 (278)
                      +++.++++       ++|++||++|.......                                    ..+.+..-.+.+
T Consensus       116 E~v~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv~v  195 (398)
T PRK13656        116 EIKQKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTVKV  195 (398)
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHHHh
Confidence            88877765       57999999987643220                                    000011122334


Q ss_pred             hHHHHHHHHH---HhcC----CCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh
Q 023689          109 QGTLNVLEAA---KRFG----VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK  181 (278)
Q Consensus       109 ~~~~~ll~~~---~~~~----~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~  181 (278)
                      .|......++   ...+    -.++|-+|....--..               |.|   ..+..|..|...|..++.++.+
T Consensus       196 Mggedw~~Wi~al~~a~lla~g~~~va~TY~G~~~t~---------------p~Y---~~g~mG~AKa~LE~~~r~La~~  257 (398)
T PRK13656        196 MGGEDWELWIDALDEAGVLAEGAKTVAYSYIGPELTH---------------PIY---WDGTIGKAKKDLDRTALALNEK  257 (398)
T ss_pred             hccchHHHHHHHHHhcccccCCcEEEEEecCCcceee---------------ccc---CCchHHHHHHHHHHHHHHHHHH
Confidence            4443322222   1111    1344444432211100               112   0135789999999888888765


Q ss_pred             c---CCceEEEecceeeCCCCC
Q 023689          182 H---GVDVVAIHPATCLGPLMQ  200 (278)
Q Consensus       182 ~---~~~~~~lrp~~i~g~~~~  200 (278)
                      .   |++++++.++.+-+....
T Consensus       258 L~~~giran~i~~g~~~T~Ass  279 (398)
T PRK13656        258 LAAKGGDAYVSVLKAVVTQASS  279 (398)
T ss_pred             hhhcCCEEEEEecCcccchhhh
Confidence            3   899999999888876543

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=99.09  E-value=2.2e-09  Score=90.03  Aligned_cols=177  Identities=17%  Similarity=0.044  Sum_probs=103.1

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCC------CeEEEEecCCCCCcccccCC-CCCCCceEEEEccCCChhhHHHHhcCcc
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNY------TSINATVFPGSDSSHLFALP-GAGDANLRVFEADVLDSGAVSRAVEGCK   82 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~------~~v~~~~r~~~~~~~~~~~~-~~~~~~v~~~~~Dl~d~~~~~~~~~~~d   82 (278)
                      .||+||||+|+||++++..|+..+.      .+++++++++.. +.+.... ...+ .......|+....++.+.++++|
T Consensus         3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~-~~~~g~~~Dl~d-~~~~~~~~~~~~~~~~~~l~~aD   80 (325)
T cd01336           3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPAL-KALEGVVMELQD-CAFPLLKSVVATTDPEEAFKDVD   80 (325)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCcc-ccccceeeehhh-ccccccCCceecCCHHHHhCCCC
Confidence            4799999999999999999998552      178888886532 1111100 0000 00022345555567788899999


Q ss_pred             EEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcC-CCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccC
Q 023689           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRK  161 (278)
Q Consensus        83 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  161 (278)
                      +|||+||.....  ..+..+.++.|+.....+.+..+++. ...++.+-|.-. .-.    ...+.+.+...+.-. ...
T Consensus        81 iVI~tAG~~~~~--~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsNPv-D~~----t~~~~k~~~~~~~~~-ig~  152 (325)
T cd01336          81 VAILVGAMPRKE--GMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGNPA-NTN----ALILLKYAPSIPKEN-FTA  152 (325)
T ss_pred             EEEEeCCcCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecCcH-HHH----HHHHHHHcCCCCHHH-EEe
Confidence            999999985542  34568899999999999999888873 344444433110 000    011111111111110 111


Q ss_pred             chhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCC
Q 023689          162 KWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQ  200 (278)
Q Consensus       162 ~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~  200 (278)
                      ..+.-+.+    +-..++++.+++...++-..|+|+...
T Consensus       153 gt~LDs~R----~r~~la~~l~v~~~~v~~~~V~GeHG~  187 (325)
T cd01336         153 LTRLDHNR----AKSQIALKLGVPVSDVKNVIIWGNHSS  187 (325)
T ss_pred             eehHHHHH----HHHHHHHHhCcChhhceEeEEEEcCCC
Confidence            12223333    333344467888888887778887654

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=99.00  E-value=1.8e-09  Score=91.21  Aligned_cols=99  Identities=23%  Similarity=0.315  Sum_probs=79.2

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEec
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a   88 (278)
                      ||+|||.|+ |+||+.++..|.++|..+|++.+|+.++...+.....   .+++.++.|+.|.+.+.+++++.|+|||++
T Consensus         1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~---~~v~~~~vD~~d~~al~~li~~~d~VIn~~   76 (389)
T COG1748           1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIG---GKVEALQVDAADVDALVALIKDFDLVINAA   76 (389)
T ss_pred             CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhcc---ccceeEEecccChHHHHHHHhcCCEEEEeC
Confidence            689999999 9999999999999994499999999877666544321   179999999999999999999999999998


Q ss_pred             ccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEec
Q 023689           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS  130 (278)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~S  130 (278)
                      ....                  ...++++|.+.|+. ++=+|
T Consensus        77 p~~~------------------~~~i~ka~i~~gv~-yvDts   99 (389)
T COG1748          77 PPFV------------------DLTILKACIKTGVD-YVDTS   99 (389)
T ss_pred             Cchh------------------hHHHHHHHHHhCCC-EEEcc
Confidence            6532                  23677888888753 44433

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=98.93  E-value=1.2e-08  Score=85.29  Aligned_cols=173  Identities=14%  Similarity=0.075  Sum_probs=113.6

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCC-C-----eEEEEecCCCC--Ccc-cccCCCCC-C--CceEEEEccCCChhhHHH
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNY-T-----SINATVFPGSD--SSH-LFALPGAG-D--ANLRVFEADVLDSGAVSR   76 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~-~-----~v~~~~r~~~~--~~~-~~~~~~~~-~--~~v~~~~~Dl~d~~~~~~   76 (278)
                      .+||.|+|++|.||..++..|+..|. .     ++.+++.++..  ..- ...+.... .  .+++     ++  ....+
T Consensus         2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~-----i~--~~~~~   74 (322)
T cd01338           2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIV-----IT--DDPNV   74 (322)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceE-----Ee--cCcHH
Confidence            36999999999999999999988775 4     57777764322  111 11111100 0  0111     12  12356


Q ss_pred             HhcCccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCC-CEEEEecceeeeecCCCCCCccccCCCCCchh
Q 023689           77 AVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV-RRVVVTSSISAIVPNPGWKGKVFDETSWTDLE  155 (278)
Q Consensus        77 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~  155 (278)
                      .++++|+||.+||.....  .....+.+..|+.....+.+..++++. ..++.+-|.-. .-...   ...... .    
T Consensus        75 ~~~daDivvitaG~~~k~--g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPv-D~~t~---~~~k~s-g----  143 (322)
T cd01338          75 AFKDADWALLVGAKPRGP--GMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPC-NTNAL---IAMKNA-P----  143 (322)
T ss_pred             HhCCCCEEEEeCCCCCCC--CCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcH-HHHHH---HHHHHc-C----
Confidence            789999999999975432  345788899999999999999988873 44444444111 00000   001111 0    


Q ss_pred             hhhccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCC
Q 023689          156 YCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQ  200 (278)
Q Consensus       156 ~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~  200 (278)
                       ..++...||.++...+++...+++..|++...+|...|+|+...
T Consensus       144 -~~p~~~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeHG~  187 (322)
T cd01338         144 -DIPPDNFTAMTRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNHSP  187 (322)
T ss_pred             -CCChHheEEehHHHHHHHHHHHHHHhCcChhHeEEEEEEeCCcc
Confidence             01223579999999999999999999999999999999999853

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK05086 malate dehydrogenase; Provisional

Probab=98.90  E-value=3.3e-08  Score=82.54  Aligned_cols=173  Identities=14%  Similarity=0.063  Sum_probs=105.7

Q ss_pred             ceEEEeCcchhhHHHHHHHHHH-CCC-CeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEe
Q 023689           10 ETVCVTGANGFIGTWLVKTLLD-NNY-TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~-~g~-~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~   87 (278)
                      |||+|+||||.+|++++..|.. .+. +++.++++++........+.. .. ....+.+  ++.+++.+.++++|+||.+
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~~-~~-~~~~i~~--~~~~d~~~~l~~~DiVIit   76 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSH-IP-TAVKIKG--FSGEDPTPALEGADVVLIS   76 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhhc-CC-CCceEEE--eCCCCHHHHcCCCCEEEEc
Confidence            6899999999999999988854 222 377777776432111111111 00 1112223  2334556777899999999


Q ss_pred             cccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceee----eecCCCCCCccccCCCCCchhhhhccCch
Q 023689           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISA----IVPNPGWKGKVFDETSWTDLEYCKSRKKW  163 (278)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~----~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  163 (278)
                      +|.....  .......+..|.....++++++++++.+++|.+.|.-.    +....    ...+....+.       ...
T Consensus        77 aG~~~~~--~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvsNP~D~~t~~~~~----~~~~~sg~p~-------~rv  143 (312)
T PRK05086         77 AGVARKP--GMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIITNPVNTTVAIAAE----VLKKAGVYDK-------NKL  143 (312)
T ss_pred             CCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCchHHHHHHHHH----HHHHhcCCCH-------HHE
Confidence            9975542  23568899999999999999999999899999887222    00000    0001111110       112


Q ss_pred             hhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCC
Q 023689          164 YPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQ  200 (278)
Q Consensus       164 y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~  200 (278)
                      .|..-...-++....++..+++..-++ +.|+|+...
T Consensus       144 ig~~~Lds~R~~~~ia~~l~~~~~~v~-~~v~GeHg~  179 (312)
T PRK05086        144 FGVTTLDVIRSETFVAELKGKQPGEVE-VPVIGGHSG  179 (312)
T ss_pred             EeeecHHHHHHHHHHHHHhCCChhheE-EEEEEecCC
Confidence            333323333444455556788888887 888998743

>PRK09620 hypothetical protein; Provisional

Probab=98.89  E-value=7.3e-09  Score=82.33  Aligned_cols=81  Identities=14%  Similarity=0.151  Sum_probs=56.7

Q ss_pred             CCceEEEeCcc----------------hhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCCh
Q 023689            8 EEETVCVTGAN----------------GFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS   71 (278)
Q Consensus         8 ~~~~vlItGat----------------G~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~   71 (278)
                      ++|+||||+|.                ||+|++|++.|+++|+ +|+++.+.......  ....  ...+..+..|....
T Consensus         2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga-~V~li~g~~~~~~~--~~~~--~~~~~~V~s~~d~~   76 (229)
T PRK09620          2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGA-HVIYLHGYFAEKPN--DINN--QLELHPFEGIIDLQ   76 (229)
T ss_pred             CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCC-eEEEEeCCCcCCCc--ccCC--ceeEEEEecHHHHH
Confidence            57999999886                9999999999999999 88877653221111  0100  01445566644444


Q ss_pred             hhHHHHhc--CccEEEEecccCCC
Q 023689           72 GAVSRAVE--GCKGVFHVASPCTL   93 (278)
Q Consensus        72 ~~~~~~~~--~~d~vi~~a~~~~~   93 (278)
                      +.+.++++  ++|+|||+|+...+
T Consensus        77 ~~l~~~~~~~~~D~VIH~AAvsD~  100 (229)
T PRK09620         77 DKMKSIITHEKVDAVIMAAAGSDW  100 (229)
T ss_pred             HHHHHHhcccCCCEEEECccccce
Confidence            67888885  68999999998554

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.84  E-value=1.4e-08  Score=81.01  Aligned_cols=69  Identities=14%  Similarity=0.217  Sum_probs=48.2

Q ss_pred             CcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCC--hhhHHHHhcCccEEEEecccCC
Q 023689           16 GANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD--SGAVSRAVEGCKGVFHVASPCT   92 (278)
Q Consensus        16 GatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d--~~~~~~~~~~~d~vi~~a~~~~   92 (278)
                      .+|||+|++|++.|+++|+ .|+++.|+.......       ..+++++.++-.+  .+.+.+.++++|+|||+||...
T Consensus        23 ~SSG~iG~aLA~~L~~~G~-~V~li~r~~~~~~~~-------~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~AAvsd   93 (229)
T PRK06732         23 HSTGQLGKIIAETFLAAGH-EVTLVTTKTAVKPEP-------HPNLSIIEIENVDDLLETLEPLVKDHDVLIHSMAVSD   93 (229)
T ss_pred             ccchHHHHHHHHHHHhCCC-EEEEEECcccccCCC-------CCCeEEEEEecHHHHHHHHHHHhcCCCEEEeCCccCC
Confidence            3488999999999999999 888887654321100       0156666654332  2456667778999999999855

>cd00704 MDH Malate dehydrogenase

Probab=98.79  E-value=5.9e-08  Score=81.26  Aligned_cols=166  Identities=16%  Similarity=0.096  Sum_probs=102.6

Q ss_pred             eEEEeCcchhhHHHHHHHHHHCCC-C-----eEEEEecCCCCCcccccCCCCCCCceEEEEccCCCh-----------hh
Q 023689           11 TVCVTGANGFIGTWLVKTLLDNNY-T-----SINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS-----------GA   73 (278)
Q Consensus        11 ~vlItGatG~iG~~l~~~L~~~g~-~-----~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~-----------~~   73 (278)
                      ||.||||+|.||+.++..|...|. .     ++.+.++++.. +           ..+....|+.|.           ..
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~-~-----------~~~g~~~Dl~d~~~~~~~~~~i~~~   69 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAM-K-----------ALEGVVMELQDCAFPLLKGVVITTD   69 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCcc-C-----------ccceeeeehhhhcccccCCcEEecC
Confidence            799999999999999999987664 2     47777776521 1           111222333332           34


Q ss_pred             HHHHhcCccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhc-CCCEEEEecceeeeecCCCCCCccccCCCCC
Q 023689           74 VSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-GVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (278)
Q Consensus        74 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~  152 (278)
                      ..+.++++|+|||+||.....  .......+..|+...+.+.+..+++ +...++.+-|.-. .-..   ....+.....
T Consensus        70 ~~~~~~~aDiVVitAG~~~~~--g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPv-D~~t---~~~~k~sg~~  143 (323)
T cd00704          70 PEEAFKDVDVAILVGAFPRKP--GMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVGNPA-NTNA---LIALKNAPNL  143 (323)
T ss_pred             hHHHhCCCCEEEEeCCCCCCc--CCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeCCcH-HHHH---HHHHHHcCCC
Confidence            567889999999999975442  3467889999999999999999888 3554444443111 0000   0001111100


Q ss_pred             chhhhhccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCC
Q 023689          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQ  200 (278)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~  200 (278)
                            ++....+.+....-++-...+++.+++...+.-..|.|+...
T Consensus       144 ------p~~~vig~t~LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG~  185 (323)
T cd00704         144 ------PPKNFTALTRLDHNRAKAQVARKLGVRVSDVKNVIIWGNHSN  185 (323)
T ss_pred             ------CHHHEEEeeHHHHHHHHHHHHHHhCcCHHHceeeeEEecccC
Confidence                  111233445555555555666677888777766678887644

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=98.75  E-value=1e-07  Score=76.90  Aligned_cols=94  Identities=18%  Similarity=0.154  Sum_probs=68.8

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc--CccEEEEe
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFHV   87 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vi~~   87 (278)
                      |+|||+||||. |+.|++.|.+.|+ +|++.++.......+...      +...+..+..|.+++.+.++  ++|+||+.
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~-~v~~s~~t~~~~~~~~~~------g~~~v~~g~l~~~~l~~~l~~~~i~~VIDA   72 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGI-EILVTVTTSEGKHLYPIH------QALTVHTGALDPQELREFLKRHSIDILVDA   72 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCC-eEEEEEccCCcccccccc------CCceEEECCCCHHHHHHHHHhcCCCEEEEc
Confidence            58999999999 9999999999998 999999987655544332      23345567778888888886  58999999


Q ss_pred             cccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEE
Q 023689           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRV  126 (278)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~  126 (278)
                      ++...               ...+.++.++|++.++..+
T Consensus        73 tHPfA---------------~~is~~a~~a~~~~~ipyl   96 (256)
T TIGR00715        73 THPFA---------------AQITTNATAVCKELGIPYV   96 (256)
T ss_pred             CCHHH---------------HHHHHHHHHHHHHhCCcEE
Confidence            76522               1235566666766665433

This enzyme was found to be a monomer by gel filtration.

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.61  E-value=1.2e-07  Score=82.17  Aligned_cols=77  Identities=19%  Similarity=0.291  Sum_probs=58.3

Q ss_pred             EEEeCcchhhHHHHHHHHHHCCCC-eEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEeccc
Q 023689           12 VCVTGANGFIGTWLVKTLLDNNYT-SINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVASP   90 (278)
Q Consensus        12 vlItGatG~iG~~l~~~L~~~g~~-~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~   90 (278)
                      |+|.|+ |++|+.+++.|.+++.. +|++.+|+.++.+.+....  ...++.+++.|+.|.+++.++++++|+|||+++.
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp   77 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL--LGDRVEAVQVDVNDPESLAELLRGCDVVINCAGP   77 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT----TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSG
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc--cccceeEEEEecCCHHHHHHHHhcCCEEEECCcc
Confidence            799999 99999999999998753 7888899887654443211  1128999999999999999999999999999876


Q ss_pred             C
Q 023689           91 C   91 (278)
Q Consensus        91 ~   91 (278)
                      .
T Consensus        78 ~   78 (386)
T PF03435_consen   78 F   78 (386)
T ss_dssp             G
T ss_pred             c
Confidence            3

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.60  E-value=6.6e-08  Score=75.47  Aligned_cols=82  Identities=17%  Similarity=0.129  Sum_probs=62.2

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCCCCCCceEEEEccCCChhhHHHHhcCccEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~v   84 (278)
                      .+++++++|+||+|.+|+.+++.|.+.|+ +|++..|+.++...+.. +....  +......|..+.+++.++++++|+|
T Consensus        25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~diV  101 (194)
T cd01078          25 DLKGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAADSLRARF--GEGVGAVETSDDAARAAAIKGADVV  101 (194)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhhc--CCcEEEeeCCCHHHHHHHHhcCCEE
Confidence            34678999999999999999999999998 88888887654333322 11001  3445667888999999999999999


Q ss_pred             EEeccc
Q 023689           85 FHVASP   90 (278)
Q Consensus        85 i~~a~~   90 (278)
                      |++.+.
T Consensus       102 i~at~~  107 (194)
T cd01078         102 FAAGAA  107 (194)
T ss_pred             EECCCC
Confidence            987654

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.56  E-value=6.9e-08  Score=80.73  Aligned_cols=75  Identities=23%  Similarity=0.191  Sum_probs=54.5

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHC-CCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~-g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~v   84 (278)
                      .+++|+|+||||+|+||+.++++|.++ |...++...|+......+..         ++..+|+.   .+.+++.++|+|
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~---------el~~~~i~---~l~~~l~~aDiV  219 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQA---------ELGGGKIL---SLEEALPEADIV  219 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHH---------HhccccHH---hHHHHHccCCEE
Confidence            456799999999999999999999864 55588888886554433321         11124443   466888999999


Q ss_pred             EEecccCC
Q 023689           85 FHVASPCT   92 (278)
Q Consensus        85 i~~a~~~~   92 (278)
                      ||+++...
T Consensus       220 v~~ts~~~  227 (340)
T PRK14982        220 VWVASMPK  227 (340)
T ss_pred             EECCcCCc
Confidence            99998644

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=98.55  E-value=1.2e-06  Score=73.43  Aligned_cols=166  Identities=18%  Similarity=0.132  Sum_probs=99.8

Q ss_pred             eEEEeCcchhhHHHHHHHHHHCCCC------eEEEEecCCCCCcccccCCCCCCCceEEEEccCCChh-----------h
Q 023689           11 TVCVTGANGFIGTWLVKTLLDNNYT------SINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSG-----------A   73 (278)
Q Consensus        11 ~vlItGatG~iG~~l~~~L~~~g~~------~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~-----------~   73 (278)
                      +|.|+|++|.||+.++..|...+..      +++++++++...            ..+....|+.|..           .
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~------------~a~g~~~Dl~d~~~~~~~~~~~~~~   68 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK------------VLEGVVMELMDCAFPLLDGVVPTHD   68 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc------------ccceeEeehhcccchhcCceeccCC
Confidence            5899999999999999999876542      477777754321            1112223333332           3


Q ss_pred             HHHHhcCccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcC-CCEEEEecceeeeecCCCCCCccccCCCCC
Q 023689           74 VSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (278)
Q Consensus        74 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~  152 (278)
                      ..+.++++|+|||+||....+  ...+.+.+..|+...+.+.+..+++. ...++.+-|.-. .-..    ....+.+..
T Consensus        69 ~~~~~~~aDiVVitAG~~~~~--~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvsNPv-Dv~t----~v~~~~sg~  141 (324)
T TIGR01758        69 PAVAFTDVDVAILVGAFPRKE--GMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVGNPA-NTNA----LVLSNYAPS  141 (324)
T ss_pred             hHHHhCCCCEEEEcCCCCCCC--CCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcH-HHHH----HHHHHHcCC
Confidence            467889999999999975442  24578999999999999999999883 545555444111 0000    000000000


Q ss_pred             chhhhhccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCC
Q 023689          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQ  200 (278)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~  200 (278)
                      .+     +...-.-+....-++-...+++.+++...++-..|+|+...
T Consensus       142 ~~-----~~vig~gt~LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG~  184 (324)
T TIGR01758       142 IP-----PKNFSALTRLDHNRALAQVAERAGVPVSDVKNVIIWGNHSS  184 (324)
T ss_pred             CC-----cceEEEeeehHHHHHHHHHHHHhCCChhhceEeEEEECCCC
Confidence            00     00111112333334444445577898888887888888654

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.52  E-value=3.6e-07  Score=78.57  Aligned_cols=76  Identities=17%  Similarity=0.140  Sum_probs=58.5

Q ss_pred             ccCCceEEEeCc----------------chhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCC
Q 023689            6 EKEEETVCVTGA----------------NGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVL   69 (278)
Q Consensus         6 ~~~~~~vlItGa----------------tG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~   69 (278)
                      .+++|++|||||                ||.+|.++++.|.+.|+ +|+++.++... ..    +   . .  ....|++
T Consensus       185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga-~V~~v~~~~~~-~~----~---~-~--~~~~dv~  252 (399)
T PRK05579        185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGA-DVTLVSGPVNL-PT----P---A-G--VKRIDVE  252 (399)
T ss_pred             ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCC-EEEEeCCCccc-cC----C---C-C--cEEEccC
Confidence            356899999999                88899999999999999 88888775421 11    0   0 2  2357999


Q ss_pred             ChhhHHHHhc----CccEEEEecccCCC
Q 023689           70 DSGAVSRAVE----GCKGVFHVASPCTL   93 (278)
Q Consensus        70 d~~~~~~~~~----~~d~vi~~a~~~~~   93 (278)
                      +.+++.+++.    .+|++||+||+...
T Consensus       253 ~~~~~~~~v~~~~~~~DilI~~Aav~d~  280 (399)
T PRK05579        253 SAQEMLDAVLAALPQADIFIMAAAVADY  280 (399)
T ss_pred             CHHHHHHHHHHhcCCCCEEEEccccccc
Confidence            9888777764    58999999997554

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.44  E-value=4.1e-07  Score=75.38  Aligned_cols=84  Identities=11%  Similarity=0.027  Sum_probs=62.0

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCC---CCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhcCc
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG---SDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVEGC   81 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~---~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~   81 (278)
                      ..++|+++|||| |++|++++..|.+.|+.+|.+..|+.   ++.+.+. .+.... ..+.+...|+.+.+++.+.++.+
T Consensus       123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~-~~~~~~~~d~~~~~~~~~~~~~~  200 (289)
T PRK12548        123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEV-PECIVNVYDLNDTEKLKAEIASS  200 (289)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcC-CCceeEEechhhhhHHHhhhccC
Confidence            345789999999 89999999999999996698888875   2322222 121111 14556678998888888888899


Q ss_pred             cEEEEecccC
Q 023689           82 KGVFHVASPC   91 (278)
Q Consensus        82 d~vi~~a~~~   91 (278)
                      |+|||+....
T Consensus       201 DilINaTp~G  210 (289)
T PRK12548        201 DILVNATLVG  210 (289)
T ss_pred             CEEEEeCCCC
Confidence            9999987554

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=98.37  E-value=8.8e-07  Score=65.19  Aligned_cols=113  Identities=13%  Similarity=0.096  Sum_probs=75.6

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCC-CeEEEEecCCCCCcccc-cCC---CCCCCceEEEEccCCChhhHHHHhcCccEE
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLF-ALP---GAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~~-~~~---~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~v   84 (278)
                      |||.|+|++|.+|++++-.|...+. .++.++++++...+-.. .+.   ...........   .    ..+.++++|+|
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~----~~~~~~~aDiv   73 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS---G----DYEALKDADIV   73 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE---S----SGGGGTTESEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc---c----cccccccccEE
Confidence            5899999999999999999999875 57888888754321110 000   00000111111   2    23457799999


Q ss_pred             EEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      |-.||.....  .....+.++.|....+.+.+..++++...++.+-|
T Consensus        74 vitag~~~~~--g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivvt  118 (141)
T PF00056_consen   74 VITAGVPRKP--GMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVVT  118 (141)
T ss_dssp             EETTSTSSST--TSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-S
T ss_pred             EEeccccccc--cccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEeC
Confidence            9999875432  34578899999999999999999987544444443

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=98.30  E-value=9.1e-06  Score=67.64  Aligned_cols=169  Identities=18%  Similarity=0.129  Sum_probs=103.3

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCC-CeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEec
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a   88 (278)
                      |||.|+|++|.+|+.++..|...+. .++.+++.+...... ..+..... ..++..  ....+++.+.++++|+||-.|
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~~a~g~a-lDL~~~~~-~~~i~~--~~~~~~~y~~~~daDivvita   76 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIVNTPGVA-ADLSHINT-PAKVTG--YLGPEELKKALKGADVVVIPA   76 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecCccceee-hHhHhCCC-cceEEE--ecCCCchHHhcCCCCEEEEeC
Confidence            5899999999999999999988874 477777776211111 11111000 111111  102234567889999999999


Q ss_pred             ccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCC-----Ccc-ccCCCCCchhhhhccCc
Q 023689           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWK-----GKV-FDETSWTDLEYCKSRKK  162 (278)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~-----~~~-~~E~~~~~~~~~~~~~~  162 (278)
                      |.....  .......++.|......+.+..++++...++.+-|      +|-..     ... .....++       +..
T Consensus        77 G~~~k~--g~tR~dll~~N~~i~~~i~~~i~~~~p~a~vivvt------NPvDv~~~i~t~~~~~~s~~p-------~~r  141 (310)
T cd01337          77 GVPRKP--GMTRDDLFNINAGIVRDLATAVAKACPKALILIIS------NPVNSTVPIAAEVLKKAGVYD-------PKR  141 (310)
T ss_pred             CCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc------CchhhHHHHHHHHHHHhcCCC-------HHH
Confidence            975432  34578999999999999999999987655555544      22100     000 0011110       112


Q ss_pred             hhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCC
Q 023689          163 WYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPL  198 (278)
Q Consensus       163 ~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~  198 (278)
                      ..|.+-.-.-++-...++..+++...++ +.|+|++
T Consensus       142 viG~~~LDs~R~~~~la~~l~v~~~~V~-~~v~GeH  176 (310)
T cd01337         142 LFGVTTLDVVRANTFVAELLGLDPAKVN-VPVIGGH  176 (310)
T ss_pred             EEeeechHHHHHHHHHHHHhCcCHHHEE-EEEEecC
Confidence            3444434434555555667788888888 8999988

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=98.24  E-value=1.1e-05  Score=67.55  Aligned_cols=118  Identities=13%  Similarity=0.144  Sum_probs=79.5

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCC-CeEEEEecCCCCCccc-ccCCCCCC--CceEEEEccCCChhhHHHHhc
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHL-FALPGAGD--ANLRVFEADVLDSGAVSRAVE   79 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~-~~~~~~~~--~~v~~~~~Dl~d~~~~~~~~~   79 (278)
                      |.++.++||.|+|+ |.+|..++-.|...|. .++..++++.+..... ..+.....  .++.+. .  .+   . +.++
T Consensus         1 ~~~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~-~--~~---~-~~~~   72 (315)
T PRK00066          1 MMKKQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIY-A--GD---Y-SDCK   72 (315)
T ss_pred             CCCCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEE-e--CC---H-HHhC
Confidence            45667789999998 9999999999998886 4688888766543221 11111000  022222 1  11   2 4579


Q ss_pred             CccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           80 GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        80 ~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      ++|+||..||.....  ..+....+..|....+.+++.+++++...++.+-|
T Consensus        73 ~adivIitag~~~k~--g~~R~dll~~N~~i~~~i~~~i~~~~~~~~vivvs  122 (315)
T PRK00066         73 DADLVVITAGAPQKP--GETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVAS  122 (315)
T ss_pred             CCCEEEEecCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            999999999874432  24567899999999999999998887555444443

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.23  E-value=5.2e-06  Score=71.27  Aligned_cols=105  Identities=12%  Similarity=0.137  Sum_probs=69.6

Q ss_pred             ccCCceEEEeCc----------------chhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCC
Q 023689            6 EKEEETVCVTGA----------------NGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVL   69 (278)
Q Consensus         6 ~~~~~~vlItGa----------------tG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~   69 (278)
                      .+++|++|||||                ||.+|..+++.|...|+ +|+.+.++....     .+.    .+  ...|+.
T Consensus       182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga-~V~~~~g~~~~~-----~~~----~~--~~~~v~  249 (390)
T TIGR00521       182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGA-DVTLITGPVSLL-----TPP----GV--KSIKVS  249 (390)
T ss_pred             ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCC-EEEEeCCCCccC-----CCC----Cc--EEEEec
Confidence            367899999999                35699999999999999 888776654321     000    22  457888


Q ss_pred             ChhhH-HHHh----cCccEEEEecccCCCCCC---CC---chhhhhhhHHhHHHHHHHHHHhcC
Q 023689           70 DSGAV-SRAV----EGCKGVFHVASPCTLEDP---VD---PEKELILPAVQGTLNVLEAAKRFG  122 (278)
Q Consensus        70 d~~~~-~~~~----~~~d~vi~~a~~~~~~~~---~~---~~~~~~~~n~~~~~~ll~~~~~~~  122 (278)
                      +.+++ ++++    .++|++|++||+......   ..   .....+..|+.-+..+++..++..
T Consensus       250 ~~~~~~~~~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~~~  313 (390)
T TIGR00521       250 TAEEMLEAALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRKIK  313 (390)
T ss_pred             cHHHHHHHHHHhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHHhhC
Confidence            88777 4444    368999999998655211   11   111234466666677777776543

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=98.23  E-value=2.7e-05  Score=65.28  Aligned_cols=175  Identities=16%  Similarity=0.132  Sum_probs=104.9

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCC-C-----eEEEEecCCCC--Ccc-cccCCCCCCCceEEEEccCCChhhHHHHhc
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNY-T-----SINATVFPGSD--SSH-LFALPGAGDANLRVFEADVLDSGAVSRAVE   79 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~-~-----~v~~~~r~~~~--~~~-~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~   79 (278)
                      ..||.|+|++|++|+.++..|...|. .     ++.+++.++..  ..- ...+...   .. ....+..-.....+.++
T Consensus         3 p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~---~~-~~~~~~~i~~~~~~~~~   78 (323)
T TIGR01759         3 PVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDC---AF-PLLAGVVATTDPEEAFK   78 (323)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhc---cc-cccCCcEEecChHHHhC
Confidence            35899999999999999999988875 4     57777765421  111 1111100   00 00001100123356788


Q ss_pred             CccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCC-CEEEEecceeeeecCCCCC-CccccCCCCCchhhh
Q 023689           80 GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV-RRVVVTSSISAIVPNPGWK-GKVFDETSWTDLEYC  157 (278)
Q Consensus        80 ~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~~v~~Ss~~~~~~~~~~~-~~~~~E~~~~~~~~~  157 (278)
                      ++|+||..||...-.  ..+..+.+..|+...+.+.+.++++.. ..++.+-|      +|-.. .....+.++     .
T Consensus        79 daDvVVitAG~~~k~--g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs------NPvDv~t~v~~k~s~-----g  145 (323)
T TIGR01759        79 DVDAALLVGAFPRKP--GMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVG------NPANTNALIASKNAP-----D  145 (323)
T ss_pred             CCCEEEEeCCCCCCC--CCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC------CcHHHHHHHHHHHcC-----C
Confidence            999999999975432  356788999999999999999999875 55555554      11100 000000000     0


Q ss_pred             hccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCC
Q 023689          158 KSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQ  200 (278)
Q Consensus       158 ~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~  200 (278)
                      .++....|.+....-++-...+++.+++...++-..|+|+...
T Consensus       146 ~p~~rViG~t~LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG~  188 (323)
T TIGR01759       146 IPPKNFSAMTRLDHNRAKYQLAAKAGVPVSDVKNVIIWGNHSN  188 (323)
T ss_pred             CCHHHEEEeeHHHHHHHHHHHHHHhCcChHHeEEeEEEecCCC
Confidence            0111234555555556666666677898888887788888653

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=98.22  E-value=3.3e-06  Score=67.33  Aligned_cols=68  Identities=10%  Similarity=0.132  Sum_probs=46.5

Q ss_pred             EEeCc-chhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHh-------cCccEE
Q 023689           13 CVTGA-NGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAV-------EGCKGV   84 (278)
Q Consensus        13 lItGa-tG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~-------~~~d~v   84 (278)
                      .||.. ||+||+++++.|.+.|+ .|++..+...    +...        ....+|+.+.+++.+++       .++|++
T Consensus        18 ~itN~SSGgIG~AIA~~la~~Ga-~Vvlv~~~~~----l~~~--------~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiL   84 (227)
T TIGR02114        18 SITNHSTGHLGKIITETFLSAGH-EVTLVTTKRA----LKPE--------PHPNLSIREIETTKDLLITLKELVQEHDIL   84 (227)
T ss_pred             eecCCcccHHHHHHHHHHHHCCC-EEEEEcChhh----cccc--------cCCcceeecHHHHHHHHHHHHHHcCCCCEE
Confidence            44443 89999999999999999 7777655221    1000        01347888877766554       358999


Q ss_pred             EEecccCCC
Q 023689           85 FHVASPCTL   93 (278)
Q Consensus        85 i~~a~~~~~   93 (278)
                      ||+||....
T Consensus        85 VnnAgv~d~   93 (227)
T TIGR02114        85 IHSMAVSDY   93 (227)
T ss_pred             EECCEeccc
Confidence            999997543

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.19  E-value=2.1e-06  Score=70.55  Aligned_cols=81  Identities=14%  Similarity=0.281  Sum_probs=62.5

Q ss_pred             eEEEeCcchhhHHHHHHHHHH----CCCCeEEEEecCCCCCccc-ccCC----CCCCCceEEEEccCCChhhHHHHhcCc
Q 023689           11 TVCVTGANGFIGTWLVKTLLD----NNYTSINATVFPGSDSSHL-FALP----GAGDANLRVFEADVLDSGAVSRAVEGC   81 (278)
Q Consensus        11 ~vlItGatG~iG~~l~~~L~~----~g~~~v~~~~r~~~~~~~~-~~~~----~~~~~~v~~~~~Dl~d~~~~~~~~~~~   81 (278)
                      -++|-|||||-|..+++.+++    .|. .+-+..|++.+.... +...    ...+..+ ++.+|..|++++.+.++.+
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~-slavAGRn~~KL~~vL~~~~~k~~~~ls~~~-i~i~D~~n~~Sl~emak~~   84 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGL-SLAVAGRNEKKLQEVLEKVGEKTGTDLSSSV-ILIADSANEASLDEMAKQA   84 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCc-eEEEecCCHHHHHHHHHHHhhccCCCcccce-EEEecCCCHHHHHHHHhhh
Confidence            479999999999999999998    666 677777877654332 2211    1122244 8999999999999999999


Q ss_pred             cEEEEecccCCC
Q 023689           82 KGVFHVASPCTL   93 (278)
Q Consensus        82 d~vi~~a~~~~~   93 (278)
                      -+|+||+|+...
T Consensus        85 ~vivN~vGPyR~   96 (423)
T KOG2733|consen   85 RVIVNCVGPYRF   96 (423)
T ss_pred             EEEEecccccee
Confidence            999999997554

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.18  E-value=4.7e-07  Score=66.22  Aligned_cols=79  Identities=15%  Similarity=0.109  Sum_probs=57.4

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      ++++++++|.|+ |+.|+.++..|.+.|+.+|++..|+.++...+......  ..+.++     +.+++.+.+.++|+||
T Consensus         9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~--~~~~~~-----~~~~~~~~~~~~DivI   80 (135)
T PF01488_consen    9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGG--VNIEAI-----PLEDLEEALQEADIVI   80 (135)
T ss_dssp             TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTG--CSEEEE-----EGGGHCHHHHTESEEE
T ss_pred             CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCc--ccccee-----eHHHHHHHHhhCCeEE
Confidence            567899999998 88999999999999997799999987766555432110  023332     2344557888999999


Q ss_pred             EecccCC
Q 023689           86 HVASPCT   92 (278)
Q Consensus        86 ~~a~~~~   92 (278)
                      ++.+...
T Consensus        81 ~aT~~~~   87 (135)
T PF01488_consen   81 NATPSGM   87 (135)
T ss_dssp             E-SSTTS
T ss_pred             EecCCCC
Confidence            9976543

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=98.16  E-value=8.7e-06  Score=69.78  Aligned_cols=102  Identities=18%  Similarity=0.185  Sum_probs=64.1

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHH-hcCccEEEE
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFH   86 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~-~~~~d~vi~   86 (278)
                      ++|||.|.||||++|++|++.|.++...++..+.++....+.+...      .......|+.+.+.+... ++++|+||-
T Consensus        37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~------~~~l~~~~~~~~~~~~~~~~~~~DvVf~  110 (381)
T PLN02968         37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGSV------FPHLITQDLPNLVAVKDADFSDVDAVFC  110 (381)
T ss_pred             cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhh------CccccCccccceecCCHHHhcCCCEEEE
Confidence            3569999999999999999999998544888887754433222211      111222444433333332 578999997


Q ss_pred             ecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeee
Q 023689           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAI  135 (278)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~  135 (278)
                      +.+..                  ....++..++ .+ .++|-+|+..-.
T Consensus       111 Alp~~------------------~s~~i~~~~~-~g-~~VIDlSs~fRl  139 (381)
T PLN02968        111 CLPHG------------------TTQEIIKALP-KD-LKIVDLSADFRL  139 (381)
T ss_pred             cCCHH------------------HHHHHHHHHh-CC-CEEEEcCchhcc
Confidence            65321                  2445666653 45 578888875543

>PRK05442 malate dehydrogenase; Provisional

Probab=98.13  E-value=5.3e-05  Score=63.68  Aligned_cols=173  Identities=17%  Similarity=0.092  Sum_probs=101.9

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCC-C-----eEEEEecCCCC--Cc-ccccCCCCC-C--CceEEEEccCCChhhHHH
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNY-T-----SINATVFPGSD--SS-HLFALPGAG-D--ANLRVFEADVLDSGAVSR   76 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~-~-----~v~~~~r~~~~--~~-~~~~~~~~~-~--~~v~~~~~Dl~d~~~~~~   76 (278)
                      ++||.|+|++|.+|+.++..|...|. .     ++.+++.++..  .. ....+.... .  .+++     ++  ....+
T Consensus         4 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~-----i~--~~~y~   76 (326)
T PRK05442          4 PVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVV-----IT--DDPNV   76 (326)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcE-----Ee--cChHH
Confidence            46999999999999999999887664 3     67777764421  11 111111000 0  0111     12  12356


Q ss_pred             HhcCccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcC-CCEEEEecceeeeecCCCCCCccccCCCCCchh
Q 023689           77 AVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLE  155 (278)
Q Consensus        77 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~  155 (278)
                      .++++|+||-+||.....  ..+..+.+..|+...+.+.+...++. ...++.+-|.-. .-..    ....+.++    
T Consensus        77 ~~~daDiVVitaG~~~k~--g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPv-Dv~t----~v~~k~s~----  145 (326)
T PRK05442         77 AFKDADVALLVGARPRGP--GMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVGNPA-NTNA----LIAMKNAP----  145 (326)
T ss_pred             HhCCCCEEEEeCCCCCCC--CCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCCch-HHHH----HHHHHHcC----
Confidence            788999999999874432  35678999999999999999998854 344444443111 0000    00000000    


Q ss_pred             hhhccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCC
Q 023689          156 YCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQ  200 (278)
Q Consensus       156 ~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~  200 (278)
                       ..++....|.+....-++-...+++.+++...++.-.|+|+...
T Consensus       146 -g~p~~rViG~t~LDs~R~r~~la~~l~v~~~~V~~~vV~GeHG~  189 (326)
T PRK05442        146 -DLPAENFTAMTRLDHNRALSQLAAKAGVPVADIKKMTVWGNHSA  189 (326)
T ss_pred             -CCCHHHEEeeeHHHHHHHHHHHHHHhCcChHHeEEeEEEECCcC
Confidence             00111245555555556666666677888888886677887643

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=98.08  E-value=2.9e-05  Score=65.72  Aligned_cols=94  Identities=19%  Similarity=0.197  Sum_probs=58.6

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCC--CeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNY--TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~--~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      |++|+|.||||++|++|++.|.+++|  .++..+.++....+.+. +.     +......|+.+.     .++++|+||-
T Consensus         1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~-~~-----g~~i~v~d~~~~-----~~~~vDvVf~   69 (334)
T PRK14874          1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELS-FK-----GKELKVEDLTTF-----DFSGVDIALF   69 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeee-eC-----CceeEEeeCCHH-----HHcCCCEEEE
Confidence            57999999999999999999999776  24566666544333332 11     223344455432     2468999997


Q ss_pred             ecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecce
Q 023689           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSI  132 (278)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~  132 (278)
                      +++...                  +..+.....+.|. ++|=.|+.
T Consensus        70 A~g~g~------------------s~~~~~~~~~~G~-~VIDlS~~   96 (334)
T PRK14874         70 SAGGSV------------------SKKYAPKAAAAGA-VVIDNSSA   96 (334)
T ss_pred             CCChHH------------------HHHHHHHHHhCCC-EEEECCch
Confidence            764311                  3344455555664 56666653

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=98.06  E-value=2e-05  Score=60.55  Aligned_cols=77  Identities=14%  Similarity=0.176  Sum_probs=47.2

Q ss_pred             cCCceEEEeCc----------------chhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCC
Q 023689            7 KEEETVCVTGA----------------NGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD   70 (278)
Q Consensus         7 ~~~~~vlItGa----------------tG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d   70 (278)
                      +++|+||||+|                ||-.|.+|++.+...|+ +|+.+...... ...        ..++.+...=.+
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga-~V~li~g~~~~-~~p--------~~~~~i~v~sa~   70 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGA-EVTLIHGPSSL-PPP--------PGVKVIRVESAE   70 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT--EEEEEE-TTS-------------TTEEEEE-SSHH
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCC-EEEEEecCccc-ccc--------ccceEEEecchh
Confidence            36789999986                79999999999999999 88877765321 110        156666543322


Q ss_pred             h--hhHHHHhcCccEEEEecccCCC
Q 023689           71 S--GAVSRAVEGCKGVFHVASPCTL   93 (278)
Q Consensus        71 ~--~~~~~~~~~~d~vi~~a~~~~~   93 (278)
                      .  +.+.+.+++.|++||+|++..+
T Consensus        71 em~~~~~~~~~~~Di~I~aAAVsDf   95 (185)
T PF04127_consen   71 EMLEAVKELLPSADIIIMAAAVSDF   95 (185)
T ss_dssp             HHHHHHHHHGGGGSEEEE-SB--SE
T ss_pred             hhhhhhccccCcceeEEEecchhhe
Confidence            1  3444555678999999998665

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=98.05  E-value=4.5e-05  Score=63.82  Aligned_cols=117  Identities=19%  Similarity=0.154  Sum_probs=73.6

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCC-CeEEEEecCCCCCcccccCCCC-CCCc--eEEEEccCCChhhHHHHhcCccEEE
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFALPGA-GDAN--LRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~~~~~~~-~~~~--v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      |||.|+|++|.+|..++..|+..|. .+|++++++. ..+.+...... .+ .  .......++-..+. +.++++|+||
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~-~~~~l~~~~~dl~d-~~~~~~~~~~i~~~~d~-~~l~~aDiVi   77 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPK-SLEKLKGLRLDIYD-ALAAAGIDAEIKISSDL-SDVAGSDIVI   77 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcc-cccccccccchhhh-chhccCCCcEEEECCCH-HHhCCCCEEE
Confidence            5899999999999999999999987 3588888843 11222111000 00 0  00000112111123 3489999999


Q ss_pred             EecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCC-EEEEecc
Q 023689           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTSS  131 (278)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~-~~v~~Ss  131 (278)
                      -++|.....  ..+....++.|+.-...+.+...+.... .+|.+++
T Consensus        78 itag~p~~~--~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~n  122 (309)
T cd05294          78 ITAGVPRKE--GMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTN  122 (309)
T ss_pred             EecCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence            999874431  2345778899999999999988777533 4555554

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=98.02  E-value=1.4e-05  Score=63.69  Aligned_cols=71  Identities=17%  Similarity=0.277  Sum_probs=60.2

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc--CCCCCCCceEEEEccCCChhhHHHH-hcCccEEEE
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA--LPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFH   86 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~--~~~~~~~~v~~~~~Dl~d~~~~~~~-~~~~d~vi~   86 (278)
                      |+++|.|+ |-+|+.+++.|.+.|+ +|+++.++++.......  .      ..+.+.+|-+|++.+.++ ++++|+++-
T Consensus         1 m~iiIiG~-G~vG~~va~~L~~~g~-~Vv~Id~d~~~~~~~~~~~~------~~~~v~gd~t~~~~L~~agi~~aD~vva   72 (225)
T COG0569           1 MKIIIIGA-GRVGRSVARELSEEGH-NVVLIDRDEERVEEFLADEL------DTHVVIGDATDEDVLEEAGIDDADAVVA   72 (225)
T ss_pred             CEEEEECC-cHHHHHHHHHHHhCCC-ceEEEEcCHHHHHHHhhhhc------ceEEEEecCCCHHHHHhcCCCcCCEEEE
Confidence            57899988 9999999999999999 89999888776544222  2      788999999999999998 889999986


Q ss_pred             ec
Q 023689           87 VA   88 (278)
Q Consensus        87 ~a   88 (278)
                      ..
T Consensus        73 ~t   74 (225)
T COG0569          73 AT   74 (225)
T ss_pred             ee
Confidence            64

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=98.01  E-value=8.3e-06  Score=76.47  Aligned_cols=163  Identities=18%  Similarity=0.183  Sum_probs=110.1

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCC----cccccCCCCCCCceEEEEccCCChhhHHHHhc------
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS----SHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~----~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~------   79 (278)
                      |.++|+||-|+.|.+|++.|.++|.+.++...|+.-+.    ..+..+...+- .|.+-.-|++..+.-+++++      
T Consensus      1769 ksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GV-qV~vsT~nitt~~ga~~Li~~s~kl~ 1847 (2376)
T KOG1202|consen 1769 KSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGV-QVQVSTSNITTAEGARGLIEESNKLG 1847 (2376)
T ss_pred             ceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCe-EEEEecccchhhhhHHHHHHHhhhcc
Confidence            68999999999999999999999997777777754332    12222322221 45555577776665566554      


Q ss_pred             CccEEEEecccCCCCCCC----CchhhhhhhHHhHHHHHHHHHHhcC--CCEEEEecceeeeecCCCCCCccccCCCCCc
Q 023689           80 GCKGVFHVASPCTLEDPV----DPEKELILPAVQGTLNVLEAAKRFG--VRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (278)
Q Consensus        80 ~~d~vi~~a~~~~~~~~~----~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~  153 (278)
                      .+-.|||+|++......+    ++.+..-+.-+.||.+|=+..++..  .+.||.+||.+.-.++.+.            
T Consensus      1848 ~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvscGRGN~GQ------------ 1915 (2376)
T KOG1202|consen 1848 PVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSSVSCGRGNAGQ------------ 1915 (2376)
T ss_pred             cccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEeecccCCCCcc------------
Confidence            357899999875542222    2233333444678888888888774  6789999987764444432            


Q ss_pred             hhhhhccCchhhhHHHHHHHHHHHHHHhcCCceEEEeccee
Q 023689          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATC  194 (278)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i  194 (278)
                              +-||++..+.|++...- +.+|++-+.+--|.|
T Consensus      1916 --------tNYG~aNS~MERiceqR-r~~GfPG~AiQWGAI 1947 (2376)
T KOG1202|consen 1916 --------TNYGLANSAMERICEQR-RHEGFPGTAIQWGAI 1947 (2376)
T ss_pred             --------cccchhhHHHHHHHHHh-hhcCCCcceeeeecc
Confidence                    56999999999988653 356888877765433

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=98.00  E-value=7.6e-05  Score=53.44  Aligned_cols=97  Identities=18%  Similarity=0.191  Sum_probs=54.5

Q ss_pred             eEEEeCcchhhHHHHHHHHHHCCCCeEEEE-ecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEecc
Q 023689           11 TVCVTGANGFIGTWLVKTLLDNNYTSINAT-VFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (278)
Q Consensus        11 ~vlItGatG~iG~~l~~~L~~~g~~~v~~~-~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a~   89 (278)
                      ||.|+||||++|+.|++.|.++..-+++.+ .++.+....+..........-....-| .+.    +.++++|+||.+.+
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~Dvvf~a~~   75 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVED-ADP----EELSDVDVVFLALP   75 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEE-TSG----HHHTTESEEEE-SC
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEee-cch----hHhhcCCEEEecCc
Confidence            689999999999999999999754354444 444423333332211000011111111 222    23489999998853


Q ss_pred             cCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           90 PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        90 ~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      ..                  ....+.+.+.+.|+ ++|=.|+
T Consensus        76 ~~------------------~~~~~~~~~~~~g~-~ViD~s~   98 (121)
T PF01118_consen   76 HG------------------ASKELAPKLLKAGI-KVIDLSG   98 (121)
T ss_dssp             HH------------------HHHHHHHHHHHTTS-EEEESSS
T ss_pred             hh------------------HHHHHHHHHhhCCc-EEEeCCH
Confidence            21                  13456666677775 5666665

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=97.95  E-value=0.00021  Score=59.74  Aligned_cols=175  Identities=17%  Similarity=0.096  Sum_probs=100.3

Q ss_pred             eEEEeCcchhhHHHHHHHHHHCCC-CeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEecc
Q 023689           11 TVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (278)
Q Consensus        11 ~vlItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a~   89 (278)
                      ||.|+|++|.||..++..|...+. .++.+++.++.....+ .+..... ...+....  +.+++.+.++++|+||-.||
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~g~a~-DL~~~~~-~~~i~~~~--~~~~~~~~~~daDivvitaG   76 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAAGVAA-DLSHIPT-AASVKGFS--GEEGLENALKGADVVVIPAG   76 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCcEEEc-hhhcCCc-CceEEEec--CCCchHHHcCCCCEEEEeCC
Confidence            689999999999999999988875 5788887765221111 1111000 11111101  11235678999999999999


Q ss_pred             cCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCC-CccccCCCCCchhhhhccCchhhhHH
Q 023689           90 PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWK-GKVFDETSWTDLEYCKSRKKWYPVSK  168 (278)
Q Consensus        90 ~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~-~~~~~E~~~~~~~~~~~~~~~y~~sK  168 (278)
                      .....  .......+..|......+.+..++++...++.+-|      +|-.. ...+++-.+..  ...++....|..-
T Consensus        77 ~~~~~--g~~R~dll~~N~~I~~~i~~~i~~~~p~~iiivvs------NPvDv~~~i~t~~~~~~--sg~p~~rViG~g~  146 (312)
T TIGR01772        77 VPRKP--GMTRDDLFNVNAGIVKDLVAAVAESCPKAMILVIT------NPVNSTVPIAAEVLKKK--GVYDPNKLFGVTT  146 (312)
T ss_pred             CCCCC--CccHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEec------CchhhHHHHHHHHHHHh--cCCChHHEEeeec
Confidence            75432  34578899999999999999998887555555544      22100 00000000000  0000111233332


Q ss_pred             HHHHHHHHHHHHhcCCceEEEecceeeCCCCC
Q 023689          169 TLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQ  200 (278)
Q Consensus       169 ~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~  200 (278)
                      ...-++-..++++.+++...+ -+.|+|++..
T Consensus       147 LDsaR~r~~la~~l~v~~~~v-~~~ViGeHg~  177 (312)
T TIGR01772       147 LDIVRANTFVAELKGKDPMEV-NVPVIGGHSG  177 (312)
T ss_pred             chHHHHHHHHHHHhCCCHHHe-EEEEEEecCC
Confidence            333444555555677877775 4688888743

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.90  E-value=3.7e-05  Score=68.08  Aligned_cols=76  Identities=21%  Similarity=0.100  Sum_probs=54.7

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCC-Ccc-cccCCCCCCCceEEEEccCCChhhHHHHhcCccE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSH-LFALPGAGDANLRVFEADVLDSGAVSRAVEGCKG   83 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~-~~~-~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~   83 (278)
                      .+++|+++|+|+++ +|..+++.|.+.|+ .|++.+++... ... ...+..   .+++++.+|..+     +...++|+
T Consensus         2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~-~V~~~d~~~~~~~~~~~~~l~~---~~~~~~~~~~~~-----~~~~~~d~   71 (450)
T PRK14106          2 ELKGKKVLVVGAGV-SGLALAKFLKKLGA-KVILTDEKEEDQLKEALEELGE---LGIELVLGEYPE-----EFLEGVDL   71 (450)
T ss_pred             CcCCCEEEEECCCH-HHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHh---cCCEEEeCCcch-----hHhhcCCE
Confidence            35678999999977 99999999999999 89888876422 111 111111   156778888876     34567999


Q ss_pred             EEEecccC
Q 023689           84 VFHVASPC   91 (278)
Q Consensus        84 vi~~a~~~   91 (278)
                      ||++++..
T Consensus        72 vv~~~g~~   79 (450)
T PRK14106         72 VVVSPGVP   79 (450)
T ss_pred             EEECCCCC
Confidence            99998863

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.88  E-value=2.1e-05  Score=64.31  Aligned_cols=78  Identities=14%  Similarity=0.106  Sum_probs=60.8

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEecc
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a~   89 (278)
                      ..++|-||+||.|.-++++|.++|. .-.+..|+..+...+....     +..+-..++.+++.+++.++.+++|+||+|
T Consensus         7 ~d~iiYGAtGy~G~lvae~l~~~g~-~~aLAgRs~~kl~~l~~~L-----G~~~~~~p~~~p~~~~~~~~~~~VVlncvG   80 (382)
T COG3268           7 YDIIIYGATGYAGGLVAEYLAREGL-TAALAGRSSAKLDALRASL-----GPEAAVFPLGVPAALEAMASRTQVVLNCVG   80 (382)
T ss_pred             eeEEEEccccchhHHHHHHHHHcCC-chhhccCCHHHHHHHHHhc-----CccccccCCCCHHHHHHHHhcceEEEeccc
Confidence            4789999999999999999999998 5666677766655444322     333444566669999999999999999999


Q ss_pred             cCCC
Q 023689           90 PCTL   93 (278)
Q Consensus        90 ~~~~   93 (278)
                      +...
T Consensus        81 Pyt~   84 (382)
T COG3268          81 PYTR   84 (382)
T ss_pred             cccc
Confidence            7664

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=97.84  E-value=5e-05  Score=72.42  Aligned_cols=78  Identities=17%  Similarity=0.148  Sum_probs=57.7

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCC-CC------------eEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhH
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNN-YT------------SINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAV   74 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g-~~------------~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~   74 (278)
                      .||+|+|.|+ |++|+..++.|.+.+ ++            .|.+.+++.+..+.+....   . +++.++.|+.|.+++
T Consensus       568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~---~-~~~~v~lDv~D~e~L  642 (1042)
T PLN02819        568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGI---E-NAEAVQLDVSDSESL  642 (1042)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhc---C-CCceEEeecCCHHHH
Confidence            4789999998 999999999998763 21            2555555544443332211   1 567899999999999


Q ss_pred             HHHhcCccEEEEeccc
Q 023689           75 SRAVEGCKGVFHVASP   90 (278)
Q Consensus        75 ~~~~~~~d~vi~~a~~   90 (278)
                      .++++++|+||.+...
T Consensus       643 ~~~v~~~DaVIsalP~  658 (1042)
T PLN02819        643 LKYVSQVDVVISLLPA  658 (1042)
T ss_pred             HHhhcCCCEEEECCCc
Confidence            9999999999998753

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=97.84  E-value=0.0013  Score=58.43  Aligned_cols=204  Identities=18%  Similarity=0.120  Sum_probs=115.0

Q ss_pred             cCCceEEEeCcc-hhhHHHHHHHHHHCCCCeEEEEecCCCC--CcccccCC---CCCCCceEEEEccCCChhhHHHHhc-
Q 023689            7 KEEETVCVTGAN-GFIGTWLVKTLLDNNYTSINATVFPGSD--SSHLFALP---GAGDANLRVFEADVLDSGAVSRAVE-   79 (278)
Q Consensus         7 ~~~~~vlItGat-G~iG~~l~~~L~~~g~~~v~~~~r~~~~--~~~~~~~~---~~~~~~v~~~~~Dl~d~~~~~~~~~-   79 (278)
                      .+.+.+|||||+ |-||..++..|+.-|. .|+++..+-+.  .+..+.+-   ......+-++..++.++.++..+++ 
T Consensus       394 y~d~valVTGA~~gSIaa~Vv~~LL~gGA-tVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIew  472 (866)
T COG4982         394 YGDKVALVTGASKGSIAAAVVARLLAGGA-TVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEW  472 (866)
T ss_pred             cccceEEEecCCCcchHHHHHHHHHhCCc-EEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHH
Confidence            346899999987 7899999999999999 66666543322  22222221   1112245566688877766666653 


Q ss_pred             --------------------CccEEEEecccCCCCC-CC--CchhhhhhhHHhHHHHHHHHHHhcCCC-------EEEEe
Q 023689           80 --------------------GCKGVFHVASPCTLED-PV--DPEKELILPAVQGTLNVLEAAKRFGVR-------RVVVT  129 (278)
Q Consensus        80 --------------------~~d~vi~~a~~~~~~~-~~--~~~~~~~~~n~~~~~~ll~~~~~~~~~-------~~v~~  129 (278)
                                          ..|.+|-+|++..-.. ..  ...+..+++-+.....++-..++++..       ++|.-
T Consensus       473 Ig~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsraE~~~rilLw~V~Rliggl~~~~s~r~v~~R~hVVLP  552 (866)
T COG4982         473 IGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRAEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLHVVLP  552 (866)
T ss_pred             hccccccccCCcceecccccCcceeeecccCCccCccccCCchHHHHHHHHHHHHHHHHHHhhhhccccCcccceEEEec
Confidence                                2488898887644321 11  112444555566666677666665422       24444


Q ss_pred             cceeeeecCCCCCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhcC----CceEEEecceeeCCCCCCCCch
Q 023689          130 SSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHG----VDVVAIHPATCLGPLMQPYLNA  205 (278)
Q Consensus       130 Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~----~~~~~lrp~~i~g~~~~~~~~~  205 (278)
                      .|-.- +...                    ..+.|+.+|...+.++..|..+++    +.++-.+.|.+-|.+.-.....
T Consensus       553 gSPNr-G~FG--------------------gDGaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWtrGTGLMg~Ndi  611 (866)
T COG4982         553 GSPNR-GMFG--------------------GDGAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWTRGTGLMGHNDI  611 (866)
T ss_pred             CCCCC-CccC--------------------CCcchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeeeccccccCCcch
Confidence            44110 0011                    115799999999999998887663    3333344455544443222222


Q ss_pred             hHHHHHHHhhCCCCcccccccCcccHHHHHHHHHhhhc
Q 023689          206 SCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFE  243 (278)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  243 (278)
                      +...+.++  |         ..--+.+++|..++-++.
T Consensus       612 iv~aiEk~--G---------V~tyS~~EmA~~LLgL~s  638 (866)
T COG4982         612 IVAAIEKA--G---------VRTYSTDEMAFNLLGLAS  638 (866)
T ss_pred             hHHHHHHh--C---------ceecCHHHHHHHHHhhcc
Confidence            33333332  1         122355777776666654

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.84  E-value=9e-05  Score=62.06  Aligned_cols=167  Identities=16%  Similarity=0.139  Sum_probs=98.5

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCC-CeEEEEecCCCCCccccc-CCCC---CCCceEEEEccCCChhhHHHHhcCccEE
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFA-LPGA---GDANLRVFEADVLDSGAVSRAVEGCKGV   84 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~~~-~~~~---~~~~v~~~~~Dl~d~~~~~~~~~~~d~v   84 (278)
                      +||.|+|+ |.+|+.++..|+..|. +++.+.+++.+..+.... +...   .........   .+   . +.++++|+|
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~---~~---~-~~l~~aDIV   72 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA---GD---Y-SDCKDADIV   72 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc---CC---H-HHhCCCCEE
Confidence            47999997 9999999999999994 389999887765433221 1000   000222211   12   2 246899999


Q ss_pred             EEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCC--CCccccCCCCCchhhhhccCc
Q 023689           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGW--KGKVFDETSWTDLEYCKSRKK  162 (278)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~--~~~~~~E~~~~~~~~~~~~~~  162 (278)
                      |.++|.....  ..+....++.|....+.+.+.+++++...++.+-|      +|-.  .....+...+       ++..
T Consensus        73 Iitag~~~~~--g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvs------NP~d~~~~~~~~~~g~-------p~~~  137 (306)
T cd05291          73 VITAGAPQKP--GETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVAS------NPVDVITYVVQKLSGL-------PKNR  137 (306)
T ss_pred             EEccCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEec------ChHHHHHHHHHHHhCc-------CHHH
Confidence            9999875432  34567899999999999999999887555444443      1110  0000000000       0011


Q ss_pred             hhhh-HHHHHHHHHHHHHHhcCCceEEEecceeeCCCCC
Q 023689          163 WYPV-SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQ  200 (278)
Q Consensus       163 ~y~~-sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~  200 (278)
                      ..|. +....-++....+++.+++...++. .|+|+...
T Consensus       138 v~g~gt~LDs~R~~~~la~~l~v~~~~v~~-~V~G~Hg~  175 (306)
T cd05291         138 VIGTGTSLDTARLRRALAEKLNVDPRSVHA-YVLGEHGD  175 (306)
T ss_pred             EeeccchHHHHHHHHHHHHHHCCCcccceE-EEEecCCC
Confidence            2333 2222333444444566888888885 79998643

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=97.84  E-value=0.00011  Score=62.46  Aligned_cols=101  Identities=20%  Similarity=0.185  Sum_probs=58.7

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEE-EccCCChhhHHHHhcCccEEEEe
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVF-EADVLDSGAVSRAVEGCKGVFHV   87 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~-~~Dl~d~~~~~~~~~~~d~vi~~   87 (278)
                      |++|.|+||||++|+++++.|.++...+++++.++.+..+.+.....    .+..+ ..++.+.+..  ..+++|+||-+
T Consensus         2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g~~l~~~~~----~~~~~~~~~~~~~~~~--~~~~vD~Vf~a   75 (343)
T PRK00436          2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAGKPLSDVHP----HLRGLVDLVLEPLDPE--ILAGADVVFLA   75 (343)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccCcchHHhCc----ccccccCceeecCCHH--HhcCCCEEEEC
Confidence            47999999999999999999998743367666654332222221100    11111 1233343332  45789999876


Q ss_pred             cccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceee
Q 023689           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISA  134 (278)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~  134 (278)
                      ...        .          ....+...+.+.| +++|=.|+...
T Consensus        76 lP~--------~----------~~~~~v~~a~~aG-~~VID~S~~fR  103 (343)
T PRK00436         76 LPH--------G----------VSMDLAPQLLEAG-VKVIDLSADFR  103 (343)
T ss_pred             CCc--------H----------HHHHHHHHHHhCC-CEEEECCcccC
Confidence            422        0          1234555665666 46787776543

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=97.83  E-value=0.00025  Score=58.66  Aligned_cols=173  Identities=16%  Similarity=0.079  Sum_probs=98.3

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCC-eEEEEecCCCCCccc-ccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEe
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYT-SINATVFPGSDSSHL-FALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~-~v~~~~r~~~~~~~~-~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~   87 (278)
                      +||.|+|+ |+||+.++-.|+.++.- ++.+++...+..+-. ..+....  ........+..... .+.++++|+|+-.
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~--~~~~~~~~i~~~~~-y~~~~~aDiVvit   76 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAA--APLGSDVKITGDGD-YEDLKGADIVVIT   76 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcc--hhccCceEEecCCC-hhhhcCCCEEEEe
Confidence            58999999 99999999999888764 788888874332111 1111000  00001111211111 4567899999999


Q ss_pred             cccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhhH
Q 023689           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVS  167 (278)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~s  167 (278)
                      ||...-..  ....+.++.|......+.+...+.+..-++.+-|.-+ .-..    ...-+.+..+.     +...-+-+
T Consensus        77 AG~prKpG--mtR~DLl~~Na~I~~~i~~~i~~~~~d~ivlVvtNPv-D~~t----y~~~k~sg~p~-----~rvig~gt  144 (313)
T COG0039          77 AGVPRKPG--MTRLDLLEKNAKIVKDIAKAIAKYAPDAIVLVVTNPV-DILT----YIAMKFSGFPK-----NRVIGSGT  144 (313)
T ss_pred             CCCCCCCC--CCHHHHHHhhHHHHHHHHHHHHhhCCCeEEEEecCcH-HHHH----HHHHHhcCCCc-----cceecccc
Confidence            98755432  3568899999999999999999887655665554111 0000    00000000000     00122333


Q ss_pred             HHHHHHHHHHHHHhcCCceEEEecceeeCCCC
Q 023689          168 KTLAEKAAWEFAEKHGVDVVAIHPATCLGPLM  199 (278)
Q Consensus       168 K~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~  199 (278)
                      ....-++-...+++.+++...++ +.|.|++.
T Consensus       145 ~LDsaR~~~~lae~~~v~~~~V~-~~ViGeHG  175 (313)
T COG0039         145 VLDSARFRTFLAEKLGVSPKDVH-AYVIGEHG  175 (313)
T ss_pred             hHHHHHHHHHHHHHhCCChhHce-eeEeccCC
Confidence            44444555555567788777777 45666543

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=97.81  E-value=0.00012  Score=63.61  Aligned_cols=172  Identities=13%  Similarity=0.021  Sum_probs=99.6

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHC-------CC-CeEEEEecCCCCCcccc-cCCCCC-C--CceEEEEccCCChhhHHHH
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDN-------NY-TSINATVFPGSDSSHLF-ALPGAG-D--ANLRVFEADVLDSGAVSRA   77 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~-------g~-~~v~~~~r~~~~~~~~~-~~~~~~-~--~~v~~~~~Dl~d~~~~~~~   77 (278)
                      -||.|+|++|.||.+++-.|...       |. .+++.++++.+...-.. .+.... .  .++.+. .      .-.+.
T Consensus       101 ~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~-~------~~ye~  173 (444)
T PLN00112        101 INVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIG-I------DPYEV  173 (444)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEe-c------CCHHH
Confidence            48999999999999999999877       43 35777777665432211 111100 0  011111 1      11456


Q ss_pred             hcCccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHh-cCCCEEEEecceeeeecCCCCCCccccCCCCCchhh
Q 023689           78 VEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKR-FGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEY  156 (278)
Q Consensus        78 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~  156 (278)
                      ++++|+||-.||.....  ..+..+.++.|+...+.+.+...+ .+...+|.+-|.-. .-..    ...-+.+...+  
T Consensus       174 ~kdaDiVVitAG~prkp--G~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVsNPv-Dv~t----~v~~k~sg~~~--  244 (444)
T PLN00112        174 FQDAEWALLIGAKPRGP--GMERADLLDINGQIFAEQGKALNEVASRNVKVIVVGNPC-NTNA----LICLKNAPNIP--  244 (444)
T ss_pred             hCcCCEEEECCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCCcH-HHHH----HHHHHHcCCCC--
Confidence            88999999999875432  346788999999999999999988 45444444443111 0000    00000000000  


Q ss_pred             hhccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCC
Q 023689          157 CKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQ  200 (278)
Q Consensus       157 ~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~  200 (278)
                         +...-.-+....-++-...+++.+++...++-.+|.|+...
T Consensus       245 ---~rViGtgT~LDsaR~r~~LA~~l~V~~~~V~~~~V~GeHGd  285 (444)
T PLN00112        245 ---AKNFHALTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHST  285 (444)
T ss_pred             ---cceEEeeccHHHHHHHHHHHHHhCcCHHHcccceEEecCCC
Confidence               01111223333334444445577899999888889998654

>PRK04148 hypothetical protein; Provisional

Probab=97.80  E-value=0.00015  Score=52.16  Aligned_cols=96  Identities=18%  Similarity=0.289  Sum_probs=72.0

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEe
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~   87 (278)
                      +++++++.|. | -|.+++..|.+.|+ +|++++.++...+..+..      .++++.+|+++++  .+.-+++|.|+-+
T Consensus        16 ~~~kileIG~-G-fG~~vA~~L~~~G~-~ViaIDi~~~aV~~a~~~------~~~~v~dDlf~p~--~~~y~~a~liysi   84 (134)
T PRK04148         16 KNKKIVELGI-G-FYFKVAKKLKESGF-DVIVIDINEKAVEKAKKL------GLNAFVDDLFNPN--LEIYKNAKLIYSI   84 (134)
T ss_pred             cCCEEEEEEe-c-CCHHHHHHHHHCCC-EEEEEECCHHHHHHHHHh------CCeEEECcCCCCC--HHHHhcCCEEEEe
Confidence            4578999988 5 89999999999999 999999988755444332      6789999999987  5567889999865


Q ss_pred             cccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      =          ++.+.       ...+++.+++.+..-+|..-|
T Consensus        85 r----------pp~el-------~~~~~~la~~~~~~~~i~~l~  111 (134)
T PRK04148         85 R----------PPRDL-------QPFILELAKKINVPLIIKPLS  111 (134)
T ss_pred             C----------CCHHH-------HHHHHHHHHHcCCCEEEEcCC
Confidence            1          12121       346888999998776666543

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.80  E-value=0.00016  Score=61.11  Aligned_cols=96  Identities=18%  Similarity=0.247  Sum_probs=56.7

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCC--CeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNY--TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~--~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      |++|.|+||||++|+.|++.|.++++  .++..+... +.......+.     +   ...++.+.+.. + ++++|+||-
T Consensus         4 ~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~-~~aG~~l~~~-----~---~~l~~~~~~~~-~-~~~vD~vFl   72 (336)
T PRK05671          4 PLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASS-ESAGHSVPFA-----G---KNLRVREVDSF-D-FSQVQLAFF   72 (336)
T ss_pred             CCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECc-ccCCCeeccC-----C---cceEEeeCChH-H-hcCCCEEEE
Confidence            47999999999999999999997655  233344333 2222111111     1   12344333322 2 478999997


Q ss_pred             ecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceee
Q 023689           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISA  134 (278)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~  134 (278)
                      +.+. .         .        ...+++.+.+.|+ ++|=.|+..-
T Consensus        73 a~p~-~---------~--------s~~~v~~~~~~G~-~VIDlS~~fR  101 (336)
T PRK05671         73 AAGA-A---------V--------SRSFAEKARAAGC-SVIDLSGALP  101 (336)
T ss_pred             cCCH-H---------H--------HHHHHHHHHHCCC-eEEECchhhc
Confidence            6532 1         0        2336667767774 5777776554

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=97.77  E-value=0.00013  Score=52.36  Aligned_cols=95  Identities=22%  Similarity=0.330  Sum_probs=55.4

Q ss_pred             ceEEEeCcchhhHHHHHHHHHH-CCCCeEEEEecCCCCC--cccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689           10 ETVCVTGANGFIGTWLVKTLLD-NNYTSINATVFPGSDS--SHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~-~g~~~v~~~~r~~~~~--~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      |||.|.|++|-+|+.+++.+.+ .+.+-+-+++|+++..  .....+.+...       ..+.-.++++++++.+|++|.
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~-------~~~~v~~~l~~~~~~~DVvID   73 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGP-------LGVPVTDDLEELLEEADVVID   73 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST--------SSBEBS-HHHHTTH-SEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCC-------cccccchhHHHhcccCCEEEE
Confidence            5899999999999999999999 5663344445544211  11111111111       222223678888888999999


Q ss_pred             ecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEec
Q 023689           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS  130 (278)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~S  130 (278)
                      +...                  ..+...++.|.++++ .+|.-+
T Consensus        74 fT~p------------------~~~~~~~~~~~~~g~-~~ViGT   98 (124)
T PF01113_consen   74 FTNP------------------DAVYDNLEYALKHGV-PLVIGT   98 (124)
T ss_dssp             ES-H------------------HHHHHHHHHHHHHT--EEEEE-
T ss_pred             cCCh------------------HHhHHHHHHHHhCCC-CEEEEC
Confidence            8522                  224567788888874 455433

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.77  E-value=5.3e-05  Score=67.16  Aligned_cols=71  Identities=18%  Similarity=0.227  Sum_probs=58.9

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCCCCCCceEEEEccCCChhhHHHH-hcCccEEEEe
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFHV   87 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~-~~~~d~vi~~   87 (278)
                      |+|+|+|+ |.+|+++++.|.+.|+ .|+++.++++..+.+.. .      ++.++.+|.++.+.+.++ ++++|.||-+
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~g~-~v~vid~~~~~~~~~~~~~------~~~~~~gd~~~~~~l~~~~~~~a~~vi~~   72 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGENN-DVTVIDTDEERLRRLQDRL------DVRTVVGNGSSPDVLREAGAEDADLLIAV   72 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCC-cEEEEECCHHHHHHHHhhc------CEEEEEeCCCCHHHHHHcCCCcCCEEEEe
Confidence            47999998 9999999999999999 88888887765444332 1      688999999999999888 8889998876


Q ss_pred             c
Q 023689           88 A   88 (278)
Q Consensus        88 a   88 (278)
                      .
T Consensus        73 ~   73 (453)
T PRK09496         73 T   73 (453)
T ss_pred             c
Confidence            4

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=97.75  E-value=0.0065  Score=44.88  Aligned_cols=185  Identities=17%  Similarity=0.186  Sum_probs=103.7

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCC-----hhhHHHH----h--
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD-----SGAVSRA----V--   78 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d-----~~~~~~~----~--   78 (278)
                      .+|+|-||-|-+|+..++.+..++| -|.-++.......           .. .|..|..+     .+++.+-    +  
T Consensus         4 grVivYGGkGALGSacv~~Fkanny-wV~siDl~eNe~A-----------d~-sI~V~~~~swtEQe~~v~~~vg~sL~g   70 (236)
T KOG4022|consen    4 GRVIVYGGKGALGSACVEFFKANNY-WVLSIDLSENEQA-----------DS-SILVDGNKSWTEQEQSVLEQVGSSLQG   70 (236)
T ss_pred             ceEEEEcCcchHhHHHHHHHHhcCe-EEEEEeecccccc-----------cc-eEEecCCcchhHHHHHHHHHHHHhhcc
Confidence            4899999999999999999999998 6666654332211           11 11223222     1222222    2  


Q ss_pred             cCccEEEEecccCCCCC-CCC----chhhhhhhHHhHHHHHHHHHHhc-CCCEEEEe-cceeeeecCCCCCCccccCCCC
Q 023689           79 EGCKGVFHVASPCTLED-PVD----PEKELILPAVQGTLNVLEAAKRF-GVRRVVVT-SSISAIVPNPGWKGKVFDETSW  151 (278)
Q Consensus        79 ~~~d~vi~~a~~~~~~~-~~~----~~~~~~~~n~~~~~~ll~~~~~~-~~~~~v~~-Ss~~~~~~~~~~~~~~~~E~~~  151 (278)
                      +++|.||..||...... ..+    +.+.+++-.+....--.+.+.++ ..+-++-+ +--.+..+.++.          
T Consensus        71 ekvDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAkaAl~gTPgM----------  140 (236)
T KOG4022|consen   71 EKVDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAKAALGGTPGM----------  140 (236)
T ss_pred             cccceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeecccccccCCCCcc----------
Confidence            25899999987544322 111    12222222222222222222222 22234443 333333333332          


Q ss_pred             CchhhhhccCchhhhHHHHHHHHHHHHHHhc-CCc----eEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccccc
Q 023689          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH-GVD----VVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (278)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~-~~~----~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (278)
                                -.||..|.+..++.++++.+. |++    ...+-|-+.-+|..+.+++..                 ..-
T Consensus       141 ----------IGYGMAKaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwMP~A-----------------Dfs  193 (236)
T KOG4022|consen  141 ----------IGYGMAKAAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWMPNA-----------------DFS  193 (236)
T ss_pred             ----------cchhHHHHHHHHHHHHhcccccCCCCCceeEEEeeeeccCccccccCCCC-----------------ccc
Confidence                      369999999999999988653 544    455566667777665552110                 135


Q ss_pred             CcccHHHHHHHHHhhhcC
Q 023689          227 GAVPVKDVAKAQVLLFES  244 (278)
Q Consensus       227 ~~i~~~D~a~~~~~~~~~  244 (278)
                      +|.+...+++-++.....
T Consensus       194 sWTPL~fi~e~flkWtt~  211 (236)
T KOG4022|consen  194 SWTPLSFISEHFLKWTTE  211 (236)
T ss_pred             CcccHHHHHHHHHHHhcc
Confidence            678888888888777643

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=97.69  E-value=0.0002  Score=61.01  Aligned_cols=102  Identities=18%  Similarity=0.164  Sum_probs=58.2

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEE-ecCCCCCcccccCCCCCCCceEEE-EccCCChhhHHHHhcCccEEEEe
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINAT-VFPGSDSSHLFALPGAGDANLRVF-EADVLDSGAVSRAVEGCKGVFHV   87 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~-~r~~~~~~~~~~~~~~~~~~v~~~-~~Dl~d~~~~~~~~~~~d~vi~~   87 (278)
                      ++|.|.||||++|+.+++.|.++...+++.+ .++....+.+.....    .+... ..++.+. +..++++++|+||-+
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sagk~~~~~~~----~l~~~~~~~~~~~-~~~~~~~~~DvVf~a   75 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAGKPVSEVHP----HLRGLVDLNLEPI-DEEEIAEDADVVFLA   75 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcCCChHHhCc----cccccCCceeecC-CHHHhhcCCCEEEEC
Confidence            4899999999999999999998744366644 433322222211000    11111 1122211 233444689999977


Q ss_pred             cccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeee
Q 023689           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAI  135 (278)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~  135 (278)
                      ....                  ....+...+.+.| +++|-.|+..-.
T Consensus        76 lP~~------------------~s~~~~~~~~~~G-~~VIDlS~~fR~  104 (346)
T TIGR01850        76 LPHG------------------VSAELAPELLAAG-VKVIDLSADFRL  104 (346)
T ss_pred             CCch------------------HHHHHHHHHHhCC-CEEEeCChhhhc
Confidence            5321                  1345666666666 578888875543

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]

Probab=97.67  E-value=0.00041  Score=55.54  Aligned_cols=116  Identities=16%  Similarity=0.083  Sum_probs=75.3

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCC-CeEEEEecCCC--CCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEE
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGS--DSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~--~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~v   84 (278)
                      .+-||.|.||+|+||+.|.-.|..+.. .+....+-...  -...+-.+      +-.......+-++.+.++++++|+|
T Consensus        27 ~~~KVAvlGAaGGIGQPLSLLlK~np~Vs~LaLYDi~~~~GVaaDlSHI------~T~s~V~g~~g~~~L~~al~~advV  100 (345)
T KOG1494|consen   27 RGLKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIANTPGVAADLSHI------NTNSSVVGFTGADGLENALKGADVV  100 (345)
T ss_pred             CcceEEEEecCCccCccHHHHHhcCcccceeeeeecccCCccccccccc------CCCCceeccCChhHHHHHhcCCCEE
Confidence            356999999999999999876654332 22222222111  11111111      1122223344457899999999999


Q ss_pred             EEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      +--||+..-...  ..+..|++|......|..++.+.....+|.+-|
T Consensus       101 vIPAGVPRKPGM--TRDDLFn~NAgIv~~l~~aia~~cP~A~i~vIs  145 (345)
T KOG1494|consen  101 VIPAGVPRKPGM--TRDDLFNINAGIVKTLAAAIAKCCPNALILVIS  145 (345)
T ss_pred             EecCCCCCCCCC--cHHHhhhcchHHHHHHHHHHHhhCccceeEeec
Confidence            999997554332  246899999999999999998887665555554

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=97.67  E-value=0.0008  Score=56.20  Aligned_cols=168  Identities=15%  Similarity=0.110  Sum_probs=99.6

Q ss_pred             eEEEeCcchhhHHHHHHHHHHCCC-CeEEEEecCCCCCccc-ccCCC----CCCCceEEEEccCCChhhHHHHhcCccEE
Q 023689           11 TVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHL-FALPG----AGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (278)
Q Consensus        11 ~vlItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~-~~~~~----~~~~~v~~~~~Dl~d~~~~~~~~~~~d~v   84 (278)
                      ||.|.|+ |.||..++..|+..+. .++.+++.+.+...-. ..+..    ....++++..+|       .+.++++|+|
T Consensus         1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~-------y~~~~~aDiv   72 (307)
T cd05290           1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGD-------YDDCADADII   72 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECC-------HHHhCCCCEE
Confidence            5889998 9999999999998875 5788888765432211 11111    000023333222       4578999999


Q ss_pred             EEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCC--CCccccCCCCCchhhhhccCc
Q 023689           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGW--KGKVFDETSWTDLEYCKSRKK  162 (278)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~--~~~~~~E~~~~~~~~~~~~~~  162 (278)
                      |-.||.........+....+..|+.....+.+...+++...++.+-|      +|-.  .........+       ++.-
T Consensus        73 vitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~~p~~i~ivvs------NPvDv~t~~~~k~sg~-------p~~r  139 (307)
T cd05290          73 VITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKVTKEAVIILIT------NPLDIAVYIAATEFDY-------PANK  139 (307)
T ss_pred             EECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEec------CcHHHHHHHHHHHhCc-------Chhh
Confidence            99998754322111257899999999999999999998666666555      2210  0000000000       0111


Q ss_pred             hhhh-HHHHHHHHHHHHHHhcCCceEEEecceeeCCCCC
Q 023689          163 WYPV-SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQ  200 (278)
Q Consensus       163 ~y~~-sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~  200 (278)
                      ..|. +-...-++-...++..+++...++. .|.|++..
T Consensus       140 viG~gt~LDs~R~~~~la~~l~v~~~~V~~-~ViGeHGd  177 (307)
T cd05290         140 VIGTGTMLDTARLRRIVADKYGVDPKNVTG-YVLGEHGS  177 (307)
T ss_pred             eecccchHHHHHHHHHHHHHhCCCcccEEE-EEEecCCC
Confidence            2333 3333334444445567898888886 48888753

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=97.66  E-value=0.00027  Score=59.89  Aligned_cols=69  Identities=17%  Similarity=0.228  Sum_probs=44.1

Q ss_pred             eEEEeCcchhhHHHHHHHHHHCCCC--eEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEec
Q 023689           11 TVCVTGANGFIGTWLVKTLLDNNYT--SINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (278)
Q Consensus        11 ~vlItGatG~iG~~l~~~L~~~g~~--~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a   88 (278)
                      +|.|.||||++|+.|++.|.++++.  .+..+.+.......+. +.     +......|+.     .+.++++|+||-++
T Consensus         1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~~~-~~-----~~~~~~~~~~-----~~~~~~~D~v~~a~   69 (339)
T TIGR01296         1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAGRKVT-FK-----GKELEVNEAK-----IESFEGIDIALFSA   69 (339)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCCeee-eC-----CeeEEEEeCC-----hHHhcCCCEEEECC
Confidence            5899999999999999999987772  2233334433332222 11     3344555553     22357899999887


Q ss_pred             cc
Q 023689           89 SP   90 (278)
Q Consensus        89 ~~   90 (278)
                      +.
T Consensus        70 g~   71 (339)
T TIGR01296        70 GG   71 (339)
T ss_pred             CH
Confidence            54

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=97.63  E-value=0.0016  Score=54.82  Aligned_cols=115  Identities=16%  Similarity=0.133  Sum_probs=74.4

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCc--ccccC--CCCCCCceEEEEccCCChhhHHHHhcCccEE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS--HLFAL--PGAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~--~~~~~--~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~v   84 (278)
                      .+||.|+|+ |.+|..++..+...|...+.+.+.+++...  .+...  ........++..  -.|   + +.++++|+|
T Consensus         6 ~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~--~~d---~-~~l~~aDiV   78 (321)
T PTZ00082          6 RRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIG--TNN---Y-EDIAGSDVV   78 (321)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEE--CCC---H-HHhCCCCEE
Confidence            479999996 999999999999889546888888776431  11000  000000122221  022   3 467999999


Q ss_pred             EEecccCCCCCCCC---chhhhhhhHHhHHHHHHHHHHhcCCC-EEEEec
Q 023689           85 FHVASPCTLEDPVD---PEKELILPAVQGTLNVLEAAKRFGVR-RVVVTS  130 (278)
Q Consensus        85 i~~a~~~~~~~~~~---~~~~~~~~n~~~~~~ll~~~~~~~~~-~~v~~S  130 (278)
                      |.+++........+   +..+.+..|+.....+.+.+.+...+ .++..|
T Consensus        79 I~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~s  128 (321)
T PTZ00082         79 IVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFVIVIT  128 (321)
T ss_pred             EECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            99998754322111   45778888999999999999888755 455555

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.61  E-value=0.0016  Score=55.14  Aligned_cols=106  Identities=13%  Similarity=0.163  Sum_probs=68.5

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc----------------------CCCC-CCCceE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA----------------------LPGA-GDANLR   62 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~----------------------~~~~-~~~~v~   62 (278)
                      +++.++|+|.|+ |.+|+++++.|...|...+++++++.-....+..                      +... ...+++
T Consensus        21 ~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~   99 (338)
T PRK12475         21 KIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIV   99 (338)
T ss_pred             hhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEE
Confidence            445679999998 7899999999999998778877775422222111                      0000 122566


Q ss_pred             EEEccCCChhhHHHHhcCccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           63 VFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        63 ~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      .+..|++ .+.+.++++++|+||.+..         +...        -..+-++|.+.++ .+|+.+.
T Consensus       100 ~~~~~~~-~~~~~~~~~~~DlVid~~D---------~~~~--------r~~in~~~~~~~i-p~i~~~~  149 (338)
T PRK12475        100 PVVTDVT-VEELEELVKEVDLIIDATD---------NFDT--------RLLINDLSQKYNI-PWIYGGC  149 (338)
T ss_pred             EEeccCC-HHHHHHHhcCCCEEEEcCC---------CHHH--------HHHHHHHHHHcCC-CEEEEEe
Confidence            6777775 4568888999999998741         1111        1224467777775 4677553

>cd05295 MDH_like Malate dehydrogenase-like

Probab=97.61  E-value=8.6e-05  Score=64.57  Aligned_cols=170  Identities=15%  Similarity=0.092  Sum_probs=100.5

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHC---CCC---eEEEEecCCCCCccccc----CCCC----CCCceEEEEccCCChhhHH
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDN---NYT---SINATVFPGSDSSHLFA----LPGA----GDANLRVFEADVLDSGAVS   75 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~---g~~---~v~~~~r~~~~~~~~~~----~~~~----~~~~v~~~~~Dl~d~~~~~   75 (278)
                      -+|+||||+|.||.+|+-.+.+=   |.+   .+.+++..+ ..+.+..    +...    .. ++.+     ++  .-.
T Consensus       124 ~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~-~~~~l~G~amDL~D~a~pll~-~v~i-----~~--~~~  194 (452)
T cd05295         124 LQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPE-NLEKLKGLVMEVEDLAFPLLR-GISV-----TT--DLD  194 (452)
T ss_pred             eEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCC-chhhHHHHHHHHHHhHHhhcC-CcEE-----EE--CCH
Confidence            47999999999999999988752   321   233333321 1111110    0000    00 1222     11  225


Q ss_pred             HHhcCccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCC--CEEEEecceeeeecCCCCCCccccCCCCCc
Q 023689           76 RAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV--RRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (278)
Q Consensus        76 ~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~--~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~  153 (278)
                      +.++++|+||-.||.....  .......++.|+.......++..++..  .+++.+.|.-+ ....    ...-..++  
T Consensus       195 ea~~daDvvIitag~prk~--G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~tNPv-D~~t----~i~~k~ap--  265 (452)
T cd05295         195 VAFKDAHVIVLLDDFLIKE--GEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGRTFL-NLKT----SILIKYAP--  265 (452)
T ss_pred             HHhCCCCEEEECCCCCCCc--CCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcH-HHHH----HHHHHHcC--
Confidence            7789999999999875432  245788999999999999999988865  56666665111 0000    00000000  


Q ss_pred             hhhhhccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCC
Q 023689          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQ  200 (278)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~  200 (278)
                         ..++....|.+....-++....+++.+++...++-..|.|+...
T Consensus       266 ---giP~~rVig~gtlds~R~r~~LA~kl~V~~~~V~~~~VwGeHG~  309 (452)
T cd05295         266 ---SIPRKNIIAVARLQENRAKALLARKLNVNSAGIKDVIVWGNIGG  309 (452)
T ss_pred             ---CCCHHHEEEecchHHHHHHHHHHHHhCcCHHHceeeEEEEccCC
Confidence               01112345666666556666667778999888888888887654

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=97.59  E-value=0.00057  Score=55.71  Aligned_cols=67  Identities=18%  Similarity=0.188  Sum_probs=44.9

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHC-CCCeEEE-EecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDN-NYTSINA-TVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~-g~~~v~~-~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      +++|.|+|++|.+|+.+++.+.+. +. ++.+ .+++++.....             -..++...+++.++++++|+||+
T Consensus         1 ~mkV~IiG~~G~mG~~i~~~l~~~~~~-elvav~d~~~~~~~~~-------------~~~~i~~~~dl~~ll~~~DvVid   66 (257)
T PRK00048          1 MIKVAVAGASGRMGRELIEAVEAAEDL-ELVAAVDRPGSPLVGQ-------------GALGVAITDDLEAVLADADVLID   66 (257)
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCC-EEEEEEecCCcccccc-------------CCCCccccCCHHHhccCCCEEEE
Confidence            468999999999999999988864 56 5555 44444332211             11234344556777778999998


Q ss_pred             ecc
Q 023689           87 VAS   89 (278)
Q Consensus        87 ~a~   89 (278)
                      ++.
T Consensus        67 ~t~   69 (257)
T PRK00048         67 FTT   69 (257)
T ss_pred             CCC
Confidence            873

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=97.58  E-value=0.0022  Score=46.81  Aligned_cols=102  Identities=17%  Similarity=0.234  Sum_probs=66.8

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCC-------C--------------CCCCceEEEEccC
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP-------G--------------AGDANLRVFEADV   68 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~-------~--------------~~~~~v~~~~~Dl   68 (278)
                      ++|+|.|+ |.+|+.+++.|...|...+++.+.+.-....+....       +              ....+++.+..++
T Consensus         3 ~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~~   81 (135)
T PF00899_consen    3 KRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEKI   81 (135)
T ss_dssp             -EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESHC
T ss_pred             CEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeeccc
Confidence            68999988 999999999999999978888877443332222210       0              0112566666777


Q ss_pred             CChhhHHHHhcCccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           69 LDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        69 ~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                       +.+...+.++++|+||.+...                 ...-..+.+.|++.+. .+|+.++
T Consensus        82 -~~~~~~~~~~~~d~vi~~~d~-----------------~~~~~~l~~~~~~~~~-p~i~~~~  125 (135)
T PF00899_consen   82 -DEENIEELLKDYDIVIDCVDS-----------------LAARLLLNEICREYGI-PFIDAGV  125 (135)
T ss_dssp             -SHHHHHHHHHTSSEEEEESSS-----------------HHHHHHHHHHHHHTT--EEEEEEE
T ss_pred             -ccccccccccCCCEEEEecCC-----------------HHHHHHHHHHHHHcCC-CEEEEEe
Confidence             446677888899999987321                 1123356678888875 6777664

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PTZ00117 malate dehydrogenase; Provisional

Probab=97.57  E-value=0.00065  Score=57.18  Aligned_cols=117  Identities=15%  Similarity=0.129  Sum_probs=74.5

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      +.+||.|+|| |.+|..++..|...|..++..++.+++...... .+.. .. ........+....+++ .++++|+||.
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~-~~-~~~~~~~~i~~~~d~~-~l~~ADiVVi   79 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKH-FS-TLVGSNINILGTNNYE-DIKDSDVVVI   79 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhh-hc-cccCCCeEEEeCCCHH-HhCCCCEEEE
Confidence            3469999998 999999999999888337888887665432111 0100 00 0000001111112344 6799999999


Q ss_pred             ecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCE-EEEec
Q 023689           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRR-VVVTS  130 (278)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~-~v~~S  130 (278)
                      +++.....  .......+..|......+.+.+.+...+. +|++|
T Consensus        80 tag~~~~~--g~~r~dll~~n~~i~~~i~~~i~~~~p~a~vivvs  122 (319)
T PTZ00117         80 TAGVQRKE--EMTREDLLTINGKIMKSVAESVKKYCPNAFVICVT  122 (319)
T ss_pred             CCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            99864432  23457788899988889999998887555 55544

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=97.55  E-value=0.00021  Score=50.66  Aligned_cols=69  Identities=20%  Similarity=0.249  Sum_probs=54.3

Q ss_pred             EEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHH-hcCccEEEEec
Q 023689           12 VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFHVA   88 (278)
Q Consensus        12 vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~-~~~~d~vi~~a   88 (278)
                      |+|.|. |-+|+.+++.|.+.+. .|+++.++++..+.+...      .+.++.+|.+|++.++++ +++++.|+-+.
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~------~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~   70 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGI-DVVVIDRDPERVEELREE------GVEVIYGDATDPEVLERAGIEKADAVVILT   70 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHT------TSEEEES-TTSHHHHHHTTGGCESEEEEES
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhc------ccccccccchhhhHHhhcCccccCEEEEcc
Confidence            578888 7899999999999776 899998887665555433      688999999999999886 67888888663

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=97.54  E-value=0.0023  Score=49.94  Aligned_cols=112  Identities=14%  Similarity=0.190  Sum_probs=68.7

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccC----------------------CCC-CCCceE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL----------------------PGA-GDANLR   62 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~----------------------~~~-~~~~v~   62 (278)
                      .++..+|+|.|++| +|.++++.|...|..+++..+.+.-....+...                      ... ...+++
T Consensus        16 ~L~~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~   94 (198)
T cd01485          16 KLRSAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLS   94 (198)
T ss_pred             HHhhCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEE
Confidence            44567999999855 999999999999997888887654322222110                      000 112445


Q ss_pred             EEEccCCC-hhhHHHHhcCccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeec
Q 023689           63 VFEADVLD-SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVP  137 (278)
Q Consensus        63 ~~~~Dl~d-~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~  137 (278)
                      .+..++.+ .+...+.++++|+||.+.         ++..        ....+-+.|++.++ .+|+.++ .+.++
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~dvVi~~~---------d~~~--------~~~~ln~~c~~~~i-p~i~~~~-~G~~G  151 (198)
T cd01485          95 IVEEDSLSNDSNIEEYLQKFTLVIATE---------ENYE--------RTAKVNDVCRKHHI-PFISCAT-YGLIG  151 (198)
T ss_pred             EEecccccchhhHHHHHhCCCEEEECC---------CCHH--------HHHHHHHHHHHcCC-CEEEEEe-ecCEE
Confidence            55555542 345566778889888652         1111        12346678888885 5777764 44444

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=97.54  E-value=0.0015  Score=52.21  Aligned_cols=106  Identities=15%  Similarity=0.161  Sum_probs=67.5

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccC--------------------CCC-CCCceEEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL--------------------PGA-GDANLRVF   64 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~--------------------~~~-~~~~v~~~   64 (278)
                      +++.++|+|.|+ |++|+++++.|...|...+++.+.+.-....+...                    ... ...+++.+
T Consensus        18 ~L~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~   96 (228)
T cd00757          18 KLKNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAY   96 (228)
T ss_pred             HHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence            455679999987 99999999999999987777776543222222110                    000 11145555


Q ss_pred             EccCCChhhHHHHhcCccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           65 EADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        65 ~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      ..++ +.+.+.+.++++|+||.+...         +.        .-..+-++|+++++ .+|+.+.
T Consensus        97 ~~~i-~~~~~~~~~~~~DvVi~~~d~---------~~--------~r~~l~~~~~~~~i-p~i~~g~  144 (228)
T cd00757          97 NERL-DAENAEELIAGYDLVLDCTDN---------FA--------TRYLINDACVKLGK-PLVSGAV  144 (228)
T ss_pred             ccee-CHHHHHHHHhCCCEEEEcCCC---------HH--------HHHHHHHHHHHcCC-CEEEEEe
Confidence            5555 345677788899999987421         11        12346677888874 5777653

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.53  E-value=0.0025  Score=54.06  Aligned_cols=106  Identities=20%  Similarity=0.250  Sum_probs=69.0

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc----------------------CCCC-CCCceE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA----------------------LPGA-GDANLR   62 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~----------------------~~~~-~~~~v~   62 (278)
                      +++.++|+|.|+ |++|+++++.|...|...+.+++.+.-....+..                      +... ....++
T Consensus        21 ~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~   99 (339)
T PRK07688         21 KLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVE   99 (339)
T ss_pred             HhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEE
Confidence            455679999999 9999999999999998788888775422211111                      1000 112455


Q ss_pred             EEEccCCChhhHHHHhcCccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           63 VFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        63 ~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      .+..+++ .+.+.++++++|+||.+.         ++.        ..-..+-++|.+.++ .+|+.++
T Consensus       100 ~~~~~~~-~~~~~~~~~~~DlVid~~---------Dn~--------~~r~~ln~~~~~~~i-P~i~~~~  149 (339)
T PRK07688        100 AIVQDVT-AEELEELVTGVDLIIDAT---------DNF--------ETRFIVNDAAQKYGI-PWIYGAC  149 (339)
T ss_pred             EEeccCC-HHHHHHHHcCCCEEEEcC---------CCH--------HHHHHHHHHHHHhCC-CEEEEee
Confidence            6666764 455777888999999773         111        112246677888874 5777664

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=97.52  E-value=0.00041  Score=56.80  Aligned_cols=171  Identities=17%  Similarity=0.103  Sum_probs=97.3

Q ss_pred             EEEeCcchhhHHHHHHHHHHCC--C-CeEEEEecCCCCCccccc-CCCCCCCceEEEEccCCChhhHHHHhcCccEEEEe
Q 023689           12 VCVTGANGFIGTWLVKTLLDNN--Y-TSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (278)
Q Consensus        12 vlItGatG~iG~~l~~~L~~~g--~-~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~   87 (278)
                      |.|+||+|.+|..++..|+..|  . .++.+.+.+++..+.... +....  ... ....+.-.++..++++++|+||..
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~--~~~-~~~~i~~~~d~~~~~~~aDiVv~t   77 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAV--EPL-ADIKVSITDDPYEAFKDADVVIIT   77 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhh--hhc-cCcEEEECCchHHHhCCCCEEEEC
Confidence            4799999999999999999888  2 278888876654332211 11100  000 012222223456788999999999


Q ss_pred             cccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhh-hccCchhhh
Q 023689           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYC-KSRKKWYPV  166 (278)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~-~~~~~~y~~  166 (278)
                      ++......  .........|+...+.+.+.+++.....++.+-|      +|-.   .++.--   ..+. .++....|.
T Consensus        78 ~~~~~~~g--~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~~t------NP~d---~~t~~~---~~~sg~~~~kviG~  143 (263)
T cd00650          78 AGVGRKPG--MGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIVVS------NPVD---IITYLV---WRYSGLPKEKVIGL  143 (263)
T ss_pred             CCCCCCcC--CCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec------CcHH---HHHHHH---HHHhCCCchhEEEe
Confidence            98755432  3456788899999999999998886444444333      1110   000000   0000 001112222


Q ss_pred             HHHHHHHHHHHHHHhcCCceEEEecceeeCCCCC
Q 023689          167 SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQ  200 (278)
Q Consensus       167 sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~  200 (278)
                      .....-++-...++..+++..-++ +.++|....
T Consensus       144 ~~ld~~r~~~~la~~l~v~~~~v~-~~v~G~hg~  176 (263)
T cd00650         144 GTLDPIRFRRILAEKLGVDPDDVK-VYILGEHGG  176 (263)
T ss_pred             ecchHHHHHHHHHHHhCCCccceE-EEEEEcCCC
Confidence            222222233333446688888888 888888654

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PRK06223 malate dehydrogenase; Reviewed

Probab=97.52  E-value=0.00058  Score=57.32  Aligned_cols=116  Identities=15%  Similarity=0.158  Sum_probs=72.7

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEe
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~   87 (278)
                      ||||.|+|+ |.+|..++..+...|..+|++.+++++...... .+....  ........++...+. +.++++|+||.+
T Consensus         2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~--~~~~~~~~i~~~~d~-~~~~~aDiVii~   77 (307)
T PRK06223          2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAA--PVEGFDTKITGTNDY-EDIAGSDVVVIT   77 (307)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhh--hhcCCCcEEEeCCCH-HHHCCCCEEEEC
Confidence            579999999 999999999999887327888887655432211 110000  000000111111223 357899999999


Q ss_pred             cccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCE-EEEec
Q 023689           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRR-VVVTS  130 (278)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~-~v~~S  130 (278)
                      ++.....  .....+.+..|+.....+++.+.+..... +|..|
T Consensus        78 ~~~p~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~t  119 (307)
T PRK06223         78 AGVPRKP--GMSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVT  119 (307)
T ss_pred             CCCCCCc--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            8764432  23456777889999999999888876444 55544

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=97.51  E-value=0.0029  Score=53.04  Aligned_cols=112  Identities=15%  Similarity=0.212  Sum_probs=74.5

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCC-CeEEEEecCCCCCcc-cccCCCCCC--CceEEEEccCCChhhHHHHhcCccEEE
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSH-LFALPGAGD--ANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~-~~~~~~~~~--~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      |||.|.|+ |.+|..++..|...|. ++|.+++++.+.... ...+.....  .......   .|   . +.++++|+||
T Consensus         1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~---~d---~-~~l~~aDiVi   72 (308)
T cd05292           1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYA---GD---Y-ADCKGADVVV   72 (308)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEee---CC---H-HHhCCCCEEE
Confidence            47999998 9999999999999983 488888887654331 111111000  0122111   12   2 3578999999


Q ss_pred             EecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      .+++.....  .......+..|+.....+.+..++++.+-++.+-|
T Consensus        73 ita~~~~~~--~~~r~dl~~~n~~i~~~~~~~l~~~~~~giiiv~t  116 (308)
T cd05292          73 ITAGANQKP--GETRLDLLKRNVAIFKEIIPQILKYAPDAILLVVT  116 (308)
T ss_pred             EccCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            999864432  34567788999999999999988876444554444

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN02602 lactate dehydrogenase

Probab=97.47  E-value=0.00086  Score=56.97  Aligned_cols=113  Identities=14%  Similarity=0.160  Sum_probs=74.1

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCC-CeEEEEecCCCCCccc-ccCCCCC--CCceEEEEccCCChhhHHHHhcCccEEE
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHL-FALPGAG--DANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~-~~~~~~~--~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      +||.|+|+ |.||+.++..|+..+. .++.+++.+++...-. ..+....  .... -+..+ .|   . +.++++|+||
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~-~i~~~-~d---y-~~~~daDiVV  110 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRT-KILAS-TD---Y-AVTAGSDLCI  110 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCC-EEEeC-CC---H-HHhCCCCEEE
Confidence            69999997 9999999999988875 5788888765433211 1111000  0011 11111 12   2 3489999999


Q ss_pred             EecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      -.||.....  .......+..|+.....+.+..++++.+.++.+-|
T Consensus       111 itAG~~~k~--g~tR~dll~~N~~I~~~i~~~I~~~~p~~ivivvt  154 (350)
T PLN02602        111 VTAGARQIP--GESRLNLLQRNVALFRKIIPELAKYSPDTILLIVS  154 (350)
T ss_pred             ECCCCCCCc--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            999975432  24567889999999999999998887554444443

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.46  E-value=0.0018  Score=50.74  Aligned_cols=107  Identities=15%  Similarity=0.118  Sum_probs=67.1

Q ss_pred             cccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc--------------------CCCCC-CCceEE
Q 023689            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA--------------------LPGAG-DANLRV   63 (278)
Q Consensus         5 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~--------------------~~~~~-~~~v~~   63 (278)
                      .+++.++|+|.|+ |.+|+++++.|...|...+++++.+.-....+..                    +.... ..+++.
T Consensus        17 ~kl~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~   95 (202)
T TIGR02356        17 QRLLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTA   95 (202)
T ss_pred             HHhcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEE
Confidence            3556789999986 9999999999999998788888775322222211                    00111 113444


Q ss_pred             EEccCCChhhHHHHhcCccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           64 FEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        64 ~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      +..++. .+.+.+.++++|+||.+...         ...        -..+-+.|++++. .+|+.++
T Consensus        96 ~~~~i~-~~~~~~~~~~~D~Vi~~~d~---------~~~--------r~~l~~~~~~~~i-p~i~~~~  144 (202)
T TIGR02356        96 LKERVT-AENLELLINNVDLVLDCTDN---------FAT--------RYLINDACVALGT-PLISAAV  144 (202)
T ss_pred             ehhcCC-HHHHHHHHhCCCEEEECCCC---------HHH--------HHHHHHHHHHcCC-CEEEEEe
Confidence            444453 35677788999999877421         111        2246677888874 4777653

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.44  E-value=0.00079  Score=59.73  Aligned_cols=74  Identities=20%  Similarity=0.269  Sum_probs=58.1

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHH-hcCccEEEE
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFH   86 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~-~~~~d~vi~   86 (278)
                      .+++++|.|+ |.+|+.+++.|.+.|+ .|+++.++++..+.+....   . ++.++.+|.++++.+.++ ++++|.||-
T Consensus       230 ~~~~iiIiG~-G~~g~~l~~~L~~~~~-~v~vid~~~~~~~~~~~~~---~-~~~~i~gd~~~~~~L~~~~~~~a~~vi~  303 (453)
T PRK09496        230 PVKRVMIVGG-GNIGYYLAKLLEKEGY-SVKLIERDPERAEELAEEL---P-NTLVLHGDGTDQELLEEEGIDEADAFIA  303 (453)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHC---C-CCeEEECCCCCHHHHHhcCCccCCEEEE
Confidence            4689999999 9999999999999999 8888888776544433211   1 577899999999988664 568898875


Q ss_pred             e
Q 023689           87 V   87 (278)
Q Consensus        87 ~   87 (278)
                      +
T Consensus       304 ~  304 (453)
T PRK09496        304 L  304 (453)
T ss_pred             C
Confidence            4

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=97.42  E-value=0.00039  Score=59.01  Aligned_cols=77  Identities=17%  Similarity=0.110  Sum_probs=54.4

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc----Ccc
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----GCK   82 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~----~~d   82 (278)
                      .+++.|||.||+|++|+..++.+...|. ..++..++.+..+..+.+...       ...|..+++..++..+    ++|
T Consensus       156 ~~g~~vLv~ggsggVG~~aiQlAk~~~~-~~v~t~~s~e~~~l~k~lGAd-------~vvdy~~~~~~e~~kk~~~~~~D  227 (347)
T KOG1198|consen  156 SKGKSVLVLGGSGGVGTAAIQLAKHAGA-IKVVTACSKEKLELVKKLGAD-------EVVDYKDENVVELIKKYTGKGVD  227 (347)
T ss_pred             CCCCeEEEEeCCcHHHHHHHHHHHhcCC-cEEEEEcccchHHHHHHcCCc-------EeecCCCHHHHHHHHhhcCCCcc
Confidence            4578999999999999999999988894 455556666666655555221       1256666554444444    599


Q ss_pred             EEEEecccC
Q 023689           83 GVFHVASPC   91 (278)
Q Consensus        83 ~vi~~a~~~   91 (278)
                      +|++|.+..
T Consensus       228 vVlD~vg~~  236 (347)
T KOG1198|consen  228 VVLDCVGGS  236 (347)
T ss_pred             EEEECCCCC
Confidence            999998763

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=97.42  E-value=0.00022  Score=59.81  Aligned_cols=36  Identities=14%  Similarity=0.138  Sum_probs=31.7

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCC
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD   46 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~   46 (278)
                      +|+|.|+| +|.+|..++..|.+.|+ .|++.+++++.
T Consensus         2 ~~~V~VIG-~G~mG~~iA~~la~~G~-~V~v~d~~~~~   37 (308)
T PRK06129          2 MGSVAIIG-AGLIGRAWAIVFARAGH-EVRLWDADPAA   37 (308)
T ss_pred             CcEEEEEC-ccHHHHHHHHHHHHCCC-eeEEEeCCHHH
Confidence            36899999 59999999999999999 89999987654

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.41  E-value=0.00064  Score=58.03  Aligned_cols=36  Identities=22%  Similarity=0.396  Sum_probs=29.7

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCC
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG   44 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   44 (278)
                      +++|.|+||||++|++|++.|.++...++.++.++.
T Consensus         3 ~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~   38 (349)
T PRK08664          3 KLKVGILGATGMVGQRFVQLLANHPWFEVTALAASE   38 (349)
T ss_pred             CcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcCh
Confidence            369999999999999999999987655777774544

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=97.39  E-value=0.0023  Score=50.49  Aligned_cols=106  Identities=15%  Similarity=0.219  Sum_probs=64.7

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccC-------------------CCC-CCCceEEEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL-------------------PGA-GDANLRVFE   65 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~-------------------~~~-~~~~v~~~~   65 (278)
                      +++..+|+|.|+ |++|+++++.|...|...+++.+.+.-....+...                   ... ...+++.+.
T Consensus        25 ~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~  103 (212)
T PRK08644         25 KLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHN  103 (212)
T ss_pred             HHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEe
Confidence            455679999997 99999999999999987788887753222222110                   000 111444444


Q ss_pred             ccCCChhhHHHHhcCccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhc-CCCEEEEecc
Q 023689           66 ADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-GVRRVVVTSS  131 (278)
Q Consensus        66 ~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~v~~Ss  131 (278)
                      ..+++ +.+.+.++++|+||.+.         +.+        .....+.+.|.+. +. .+|+.+.
T Consensus       104 ~~i~~-~~~~~~~~~~DvVI~a~---------D~~--------~~r~~l~~~~~~~~~~-p~I~~~~  151 (212)
T PRK08644        104 EKIDE-DNIEELFKDCDIVVEAF---------DNA--------ETKAMLVETVLEHPGK-KLVAASG  151 (212)
T ss_pred             eecCH-HHHHHHHcCCCEEEECC---------CCH--------HHHHHHHHHHHHhCCC-CEEEeeh
Confidence            55543 44666778888888762         111        1123456677776 63 5777654

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.36  E-value=0.00017  Score=59.51  Aligned_cols=77  Identities=17%  Similarity=0.168  Sum_probs=52.4

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      +++++++|+|+ |++|+.++..|...|..+|++..|+.++.+.+........ .+.+   ++    ...+.+.++|+||+
T Consensus       121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~-~~~~---~~----~~~~~~~~~DivIn  191 (278)
T PRK00258        121 LKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALG-KAEL---DL----ELQEELADFDLIIN  191 (278)
T ss_pred             CCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc-ceee---cc----cchhccccCCEEEE
Confidence            56789999997 9999999999999995589999998765544432111000 1111   11    23456678999999


Q ss_pred             ecccCC
Q 023689           87 VASPCT   92 (278)
Q Consensus        87 ~a~~~~   92 (278)
                      +.....
T Consensus       192 aTp~g~  197 (278)
T PRK00258        192 ATSAGM  197 (278)
T ss_pred             CCcCCC
Confidence            976543

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=97.35  E-value=0.0011  Score=50.25  Aligned_cols=57  Identities=16%  Similarity=0.194  Sum_probs=46.8

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      ++.+++|+|+|+++.+|..+++.|.++|. .|....|+.                           +.+.+.++.+|+||
T Consensus        41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r~~---------------------------~~l~~~l~~aDiVI   92 (168)
T cd01080          41 DLAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHSKT---------------------------KNLKEHTKQADIVI   92 (168)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEECCc---------------------------hhHHHHHhhCCEEE
Confidence            46789999999977889999999999999 777666531                           35677889999999


Q ss_pred             Eeccc
Q 023689           86 HVASP   90 (278)
Q Consensus        86 ~~a~~   90 (278)
                      .+.+.
T Consensus        93 sat~~   97 (168)
T cd01080          93 VAVGK   97 (168)
T ss_pred             EcCCC
Confidence            88765

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK08223 hypothetical protein; Validated

Probab=97.35  E-value=0.0039  Score=51.15  Aligned_cols=108  Identities=13%  Similarity=0.134  Sum_probs=67.2

Q ss_pred             cccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCC--------------------CC-CCCceEE
Q 023689            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP--------------------GA-GDANLRV   63 (278)
Q Consensus         5 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~--------------------~~-~~~~v~~   63 (278)
                      .+++..+|+|.|+ |++|++++..|...|...+.+++.+.-....+....                    .. ...+++.
T Consensus        23 ~kL~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~  101 (287)
T PRK08223         23 QRLRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRA  101 (287)
T ss_pred             HHHhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEE
Confidence            4556679999988 999999999999999878888777543333332110                    00 1114455


Q ss_pred             EEccCCChhhHHHHhcCccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEec
Q 023689           64 FEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS  130 (278)
Q Consensus        64 ~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~S  130 (278)
                      +...++ ++.+.++++++|+|+.+.         +..      +...-..+-++|++.++ .+|+.+
T Consensus       102 ~~~~l~-~~n~~~ll~~~DlVvD~~---------D~~------~~~~r~~ln~~c~~~~i-P~V~~~  151 (287)
T PRK08223        102 FPEGIG-KENADAFLDGVDVYVDGL---------DFF------EFDARRLVFAACQQRGI-PALTAA  151 (287)
T ss_pred             EecccC-ccCHHHHHhCCCEEEECC---------CCC------cHHHHHHHHHHHHHcCC-CEEEEe
Confidence            555554 345677788888887542         110      01112346678888874 477754

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=97.34  E-value=0.0011  Score=55.44  Aligned_cols=113  Identities=14%  Similarity=0.130  Sum_probs=73.8

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCC-CeEEEEecCCCCCccc-ccCCCCC--CCceEEEEccCCChhhHHHHhcCccEEE
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHL-FALPGAG--DANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~-~~~~~~~--~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      +||.|+|+ |.||..++-.|...|. .++.+++.+.+...-. ..+....  .....+..     ..+.+ .++++|+||
T Consensus         4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~-----~~dy~-~~~~adivv   76 (312)
T cd05293           4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEA-----DKDYS-VTANSKVVI   76 (312)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEE-----CCCHH-HhCCCCEEE
Confidence            58999997 9999999999988875 5788887765432111 1111000  00111111     11233 379999999


Q ss_pred             EecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      -+||.....  .......+..|....+.+.+..++++.+.++.+-|
T Consensus        77 itaG~~~k~--g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvs  120 (312)
T cd05293          77 VTAGARQNE--GESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVS  120 (312)
T ss_pred             ECCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEcc
Confidence            999875532  24567889999999999999999987554444443

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=97.34  E-value=0.0045  Score=49.85  Aligned_cols=105  Identities=12%  Similarity=0.067  Sum_probs=65.5

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCC--------------------CC-CCCceEEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP--------------------GA-GDANLRVF   64 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~--------------------~~-~~~~v~~~   64 (278)
                      +++..+|+|.|+ |++|+++++.|...|...+++.+.+.-....+....                    .. ...+++.+
T Consensus        21 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~   99 (240)
T TIGR02355        21 ALKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPI   99 (240)
T ss_pred             HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEE
Confidence            456679999988 999999999999999878888877554433332110                    00 01133444


Q ss_pred             EccCCChhhHHHHhcCccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEec
Q 023689           65 EADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS  130 (278)
Q Consensus        65 ~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~S  130 (278)
                      ...+ +.+.+.+.++++|+||.+..         ...        ....+-++|.+.++ .+|+-+
T Consensus       100 ~~~i-~~~~~~~~~~~~DlVvd~~D---------~~~--------~r~~ln~~~~~~~i-p~v~~~  146 (240)
T TIGR02355       100 NAKL-DDAELAALIAEHDIVVDCTD---------NVE--------VRNQLNRQCFAAKV-PLVSGA  146 (240)
T ss_pred             eccC-CHHHHHHHhhcCCEEEEcCC---------CHH--------HHHHHHHHHHHcCC-CEEEEE
Confidence            3333 33456677788888887631         111        12345577888875 477654

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.33  E-value=0.00024  Score=53.19  Aligned_cols=77  Identities=12%  Similarity=0.002  Sum_probs=50.9

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      .++++++|+|+ |.+|+.+++.|.+.|.+.|.+..|+.+.........     ....+..+..+   ..+.++++|+||.
T Consensus        17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~-----~~~~~~~~~~~---~~~~~~~~Dvvi~   87 (155)
T cd01065          17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERF-----GELGIAIAYLD---LEELLAEADLIIN   87 (155)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHH-----hhcccceeecc---hhhccccCCEEEe
Confidence            45689999998 899999999999986338888888765543322110     11111123333   3444789999999


Q ss_pred             ecccCC
Q 023689           87 VASPCT   92 (278)
Q Consensus        87 ~a~~~~   92 (278)
                      +.....
T Consensus        88 ~~~~~~   93 (155)
T cd01065          88 TTPVGM   93 (155)
T ss_pred             CcCCCC
Confidence            986533

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=97.32  E-value=0.009  Score=44.01  Aligned_cols=101  Identities=16%  Similarity=0.208  Sum_probs=62.8

Q ss_pred             eEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccC--------------------CCCC-CCceEEEEccCC
Q 023689           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL--------------------PGAG-DANLRVFEADVL   69 (278)
Q Consensus        11 ~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~--------------------~~~~-~~~v~~~~~Dl~   69 (278)
                      +|+|.|+ |.+|+++++.|...|...+.+.+.+.-....+...                    .... ..+++.+..++.
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~   79 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS   79 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence            5899997 99999999999999987788887643322222110                    0000 113444555554


Q ss_pred             ChhhHHHHhcCccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           70 DSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        70 d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      +. ...+.++++|+||.+...                 ......+.++|++.++ .+|..++
T Consensus        80 ~~-~~~~~~~~~diVi~~~d~-----------------~~~~~~l~~~~~~~~i-~~i~~~~  122 (143)
T cd01483          80 ED-NLDDFLDGVDLVIDAIDN-----------------IAVRRALNRACKELGI-PVIDAGG  122 (143)
T ss_pred             hh-hHHHHhcCCCEEEECCCC-----------------HHHHHHHHHHHHHcCC-CEEEEcC
Confidence            33 235667888888876422                 1224457788888874 4777665

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=97.32  E-value=0.0033  Score=53.37  Aligned_cols=96  Identities=17%  Similarity=0.172  Sum_probs=53.6

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCC--CeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNY--TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~--~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      .++|.|.||||++|++|++.|.+++|  .++..+.........+.. .     +......++.     .+.++++|+||.
T Consensus         7 ~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~~~-~-----~~~~~v~~~~-----~~~~~~~D~vf~   75 (344)
T PLN02383          7 GPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAGKKVTF-E-----GRDYTVEELT-----EDSFDGVDIALF   75 (344)
T ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCCCeeee-c-----CceeEEEeCC-----HHHHcCCCEEEE
Confidence            36899999999999999999998665  233333332221111111 1     1122222332     123578999997


Q ss_pred             ecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceee
Q 023689           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISA  134 (278)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~  134 (278)
                      +++...                  ...+...+.+.| .++|=.|+..-
T Consensus        76 a~p~~~------------------s~~~~~~~~~~g-~~VIDlS~~fR  104 (344)
T PLN02383         76 SAGGSI------------------SKKFGPIAVDKG-AVVVDNSSAFR  104 (344)
T ss_pred             CCCcHH------------------HHHHHHHHHhCC-CEEEECCchhh
Confidence            764311                  223444454555 35777776443

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=97.30  E-value=0.0052  Score=47.94  Aligned_cols=110  Identities=13%  Similarity=0.101  Sum_probs=65.4

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccC--------------------CCC-CCCceEEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL--------------------PGA-GDANLRVF   64 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~--------------------~~~-~~~~v~~~   64 (278)
                      +++.++|+|.|+ |.+|.++++.|...|...++..+.+.-....+...                    ... ...+++.+
T Consensus        18 ~L~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~   96 (197)
T cd01492          18 RLRSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVD   96 (197)
T ss_pred             HHHhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEE
Confidence            455679999987 55999999999999997788887643322222110                    010 11134444


Q ss_pred             EccCCChhhHHHHhcCccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeec
Q 023689           65 EADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVP  137 (278)
Q Consensus        65 ~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~  137 (278)
                      ...+.+  ...+.++++|+||.+..         +..        .-..+-++|++.++ .+|+.++ .+.++
T Consensus        97 ~~~~~~--~~~~~~~~~dvVi~~~~---------~~~--------~~~~ln~~c~~~~i-p~i~~~~-~G~~G  148 (197)
T cd01492          97 TDDISE--KPEEFFSQFDVVVATEL---------SRA--------ELVKINELCRKLGV-KFYATGV-HGLFG  148 (197)
T ss_pred             ecCccc--cHHHHHhCCCEEEECCC---------CHH--------HHHHHHHHHHHcCC-CEEEEEe-cCCEE
Confidence            444442  23556778888886521         111        12345578888886 4777664 44333

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.28  E-value=0.00063  Score=56.30  Aligned_cols=70  Identities=14%  Similarity=0.117  Sum_probs=51.3

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      ++.+++++|+|. |.+|+.+++.|...|+ +|+...|+.+........      +...     ...+.+.+.++++|+||
T Consensus       148 ~l~gk~v~IiG~-G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~------g~~~-----~~~~~l~~~l~~aDiVi  214 (287)
T TIGR02853       148 TIHGSNVMVLGF-GRTGMTIARTFSALGA-RVFVGARSSADLARITEM------GLIP-----FPLNKLEEKVAEIDIVI  214 (287)
T ss_pred             CCCCCEEEEEcC-hHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHC------CCee-----ecHHHHHHHhccCCEEE
Confidence            456899999999 8899999999999999 898888876543222111      1111     13456778889999999


Q ss_pred             Eec
Q 023689           86 HVA   88 (278)
Q Consensus        86 ~~a   88 (278)
                      ++.
T Consensus       215 nt~  217 (287)
T TIGR02853       215 NTI  217 (287)
T ss_pred             ECC
Confidence            975

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=97.27  E-value=0.0013  Score=56.36  Aligned_cols=172  Identities=14%  Similarity=0.032  Sum_probs=94.8

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCe----EEE--E--ecCCCCCcccc-cCCCCC-C--CceEEEEccCCChhhHHHH
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTS----INA--T--VFPGSDSSHLF-ALPGAG-D--ANLRVFEADVLDSGAVSRA   77 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~----v~~--~--~r~~~~~~~~~-~~~~~~-~--~~v~~~~~Dl~d~~~~~~~   77 (278)
                      -||.|+|++|.+|.+++-.|...|.-.    |.+  +  +++.+...-.. .+.... .  .++.+     +.  .-.+.
T Consensus        45 ~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i-----~~--~~y~~  117 (387)
T TIGR01757        45 VNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSI-----GI--DPYEV  117 (387)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEE-----ec--CCHHH
Confidence            489999999999999999998877522    222  2  33333321110 111000 0  01111     11  12466


Q ss_pred             hcCccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcC-CCEEEEecceeeeecCCCCCCccccCCCCCchhh
Q 023689           78 VEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEY  156 (278)
Q Consensus        78 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~  156 (278)
                      ++++|+||..||.....  .....+.++.|+...+.+.+...++. ...+|.+-|.-. .-..    ...-+.+...+  
T Consensus       118 ~kdaDIVVitAG~prkp--g~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVsNPv-Dv~t----~v~~k~sg~~~--  188 (387)
T TIGR01757       118 FEDADWALLIGAKPRGP--GMERADLLDINGQIFADQGKALNAVASKNCKVLVVGNPC-NTNA----LIAMKNAPNIP--  188 (387)
T ss_pred             hCCCCEEEECCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCcH-HHHH----HHHHHHcCCCc--
Confidence            88999999999875432  34678899999999999999998853 444444443111 0000    00000000000  


Q ss_pred             hhccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCC
Q 023689          157 CKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQ  200 (278)
Q Consensus       157 ~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~  200 (278)
                         +...=.-+....-++-...+++.+++...++-+.|.|+...
T Consensus       189 ---~rviG~gT~LDsaR~r~~LA~~l~v~~~~V~~~~V~GeHGd  229 (387)
T TIGR01757       189 ---RKNFHALTRLDENRAKCQLALKSGKFYTSVSNVTIWGNHST  229 (387)
T ss_pred             ---ccEEEecchhHHHHHHHHHHHHHCcChhHcceeEEEecCCC
Confidence               00111223334444444555567888888877788888653

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=97.27  E-value=0.0017  Score=54.43  Aligned_cols=94  Identities=18%  Similarity=0.088  Sum_probs=67.6

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEec
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a   88 (278)
                      +++|+|+|++ ++|...++.+...|. +|++++|++++.+..+++      +...+.-.- |++.+.+.-+.+|++|.++
T Consensus       167 G~~V~I~G~G-GlGh~avQ~Aka~ga-~Via~~~~~~K~e~a~~l------GAd~~i~~~-~~~~~~~~~~~~d~ii~tv  237 (339)
T COG1064         167 GKWVAVVGAG-GLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKL------GADHVINSS-DSDALEAVKEIADAIIDTV  237 (339)
T ss_pred             CCEEEEECCc-HHHHHHHHHHHHcCC-eEEEEeCChHHHHHHHHh------CCcEEEEcC-CchhhHHhHhhCcEEEECC
Confidence            7899999995 999999998888998 999999999887766665      333332222 6666666655699999987


Q ss_pred             ccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      + ...                 ....++.++..|  +++.++=
T Consensus       238 ~-~~~-----------------~~~~l~~l~~~G--~~v~vG~  260 (339)
T COG1064         238 G-PAT-----------------LEPSLKALRRGG--TLVLVGL  260 (339)
T ss_pred             C-hhh-----------------HHHHHHHHhcCC--EEEEECC
Confidence            6 221                 224556666655  7888773

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.25  E-value=0.00042  Score=60.25  Aligned_cols=77  Identities=12%  Similarity=0.078  Sum_probs=57.5

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      .+.++++||.|+ |.+|+.+++.|...|...+++..|+.++...+....+    .     +.....+++.+.+..+|+||
T Consensus       178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~----~-----~~~~~~~~l~~~l~~aDiVI  247 (414)
T PRK13940        178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFR----N-----ASAHYLSELPQLIKKADIII  247 (414)
T ss_pred             CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhc----C-----CeEecHHHHHHHhccCCEEE
Confidence            456799999998 9999999999999997689988888765554433111    1     12233456788889999999


Q ss_pred             EecccCC
Q 023689           86 HVASPCT   92 (278)
Q Consensus        86 ~~a~~~~   92 (278)
                      ++.+...
T Consensus       248 ~aT~a~~  254 (414)
T PRK13940        248 AAVNVLE  254 (414)
T ss_pred             ECcCCCC
Confidence            9987644

>PRK08328 hypothetical protein; Provisional

Probab=97.24  E-value=0.0069  Score=48.52  Aligned_cols=111  Identities=14%  Similarity=0.132  Sum_probs=66.5

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccC---------------------CC-CCCCceEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL---------------------PG-AGDANLRV   63 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~---------------------~~-~~~~~v~~   63 (278)
                      +++..+|+|.|+ |++|+++++.|...|...+++.+.+.-....+...                     .. .....++.
T Consensus        24 ~L~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~  102 (231)
T PRK08328         24 KLKKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIET  102 (231)
T ss_pred             HHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEE
Confidence            455679999988 89999999999999987888776543222222110                     00 01113444


Q ss_pred             EEccCCChhhHHHHhcCccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeec
Q 023689           64 FEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVP  137 (278)
Q Consensus        64 ~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~  137 (278)
                      +...+ +.+.+.+.++++|+||.+.-.         ..        .-..+-++|++.++ .+|+.++ .+.++
T Consensus       103 ~~~~~-~~~~~~~~l~~~D~Vid~~d~---------~~--------~r~~l~~~~~~~~i-p~i~g~~-~g~~G  156 (231)
T PRK08328        103 FVGRL-SEENIDEVLKGVDVIVDCLDN---------FE--------TRYLLDDYAHKKGI-PLVHGAV-EGTYG  156 (231)
T ss_pred             EeccC-CHHHHHHHHhcCCEEEECCCC---------HH--------HHHHHHHHHHHcCC-CEEEEee-ccCEE
Confidence            44444 344566777888888876311         11        11234467788875 4777554 44443

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=97.24  E-value=0.007  Score=49.35  Aligned_cols=39  Identities=21%  Similarity=0.436  Sum_probs=32.7

Q ss_pred             cccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCC
Q 023689            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG   44 (278)
Q Consensus         5 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   44 (278)
                      ..++..+|+|.|+ |++|+++++.|...|...+++++.+.
T Consensus        26 ~kL~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~   64 (268)
T PRK15116         26 QLFADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDD   64 (268)
T ss_pred             HHhcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCE
Confidence            4556789999988 99999999999999976888887644

>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=97.24  E-value=0.00073  Score=56.17  Aligned_cols=36  Identities=19%  Similarity=0.209  Sum_probs=29.6

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCC
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG   44 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   44 (278)
                      |+||.|.||||+.|.+|++.|..+..-++...+.+.
T Consensus         2 ~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss~~   37 (349)
T COG0002           2 MIKVGIVGASGYTGLELLRLLAGHPDVELILISSRE   37 (349)
T ss_pred             CceEEEEcCCCCcHHHHHHHHhcCCCeEEEEeechh
Confidence            679999999999999999999998764565555444

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=97.23  E-value=0.00061  Score=55.90  Aligned_cols=110  Identities=15%  Similarity=0.063  Sum_probs=67.0

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEe
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~   87 (278)
                      ++++++|.|| |+.+++++..|++.|..+|++..|+.++.+.+........  ......++.+.+...    .+|+|||+
T Consensus       125 ~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~--~~~~~~~~~~~~~~~----~~dliINa  197 (283)
T COG0169         125 TGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELG--AAVEAAALADLEGLE----EADLLINA  197 (283)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc--ccccccccccccccc----ccCEEEEC
Confidence            4689999998 9999999999999997689999998887776655332211  011112222222111    78999998


Q ss_pred             cccCCCCCCCC---------chhhhhhhHHhH-HHHHHHHHHhcCCC
Q 023689           88 ASPCTLEDPVD---------PEKELILPAVQG-TLNVLEAAKRFGVR  124 (278)
Q Consensus        88 a~~~~~~~~~~---------~~~~~~~~n~~~-~~~ll~~~~~~~~~  124 (278)
                      ...........         ...-.++++... ---|++.|+++|.+
T Consensus       198 Tp~Gm~~~~~~~~~~~~~l~~~~~v~D~vY~P~~TplL~~A~~~G~~  244 (283)
T COG0169         198 TPVGMAGPEGDSPVPAELLPKGAIVYDVVYNPLETPLLREARAQGAK  244 (283)
T ss_pred             CCCCCCCCCCCCCCcHHhcCcCCEEEEeccCCCCCHHHHHHHHcCCe
Confidence            76533321100         111223333331 23588889888854

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=97.22  E-value=0.00087  Score=55.80  Aligned_cols=69  Identities=17%  Similarity=0.199  Sum_probs=51.5

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      ..+++++|+|. |.+|+.++..|...|+ +|++.+|+++........      +.+++     ..+.+.+.++++|+||+
T Consensus       150 l~g~kvlViG~-G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~------G~~~~-----~~~~l~~~l~~aDiVI~  216 (296)
T PRK08306        150 IHGSNVLVLGF-GRTGMTLARTLKALGA-NVTVGARKSAHLARITEM------GLSPF-----HLSELAEEVGKIDIIFN  216 (296)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHc------CCeee-----cHHHHHHHhCCCCEEEE
Confidence            35789999998 7899999999999999 899998876543333222      22322     23467788899999999


Q ss_pred             ec
Q 023689           87 VA   88 (278)
Q Consensus        87 ~a   88 (278)
                      ++
T Consensus       217 t~  218 (296)
T PRK08306        217 TI  218 (296)
T ss_pred             CC
Confidence            75

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.20  E-value=0.0016  Score=53.41  Aligned_cols=99  Identities=15%  Similarity=0.152  Sum_probs=70.1

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCC-CcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~-~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      .++++-|+|++| +|+--++.-...|+ +|+++++...+ .+..+.+      +.+++..-..|++.+.++.+..|.++|
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKAMG~-rV~vis~~~~kkeea~~~L------GAd~fv~~~~d~d~~~~~~~~~dg~~~  252 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKAMGM-RVTVISTSSKKKEEAIKSL------GADVFVDSTEDPDIMKAIMKTTDGGID  252 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHHhCc-EEEEEeCCchhHHHHHHhc------CcceeEEecCCHHHHHHHHHhhcCcce
Confidence            368999999988 99988888888899 99999998744 4444445      555555445588999998888888888


Q ss_pred             ecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      .+.....    ..           ...++.+++..|  ++|+++-
T Consensus       253 ~v~~~a~----~~-----------~~~~~~~lk~~G--t~V~vg~  280 (360)
T KOG0023|consen  253 TVSNLAE----HA-----------LEPLLGLLKVNG--TLVLVGL  280 (360)
T ss_pred             eeeeccc----cc-----------hHHHHHHhhcCC--EEEEEeC
Confidence            7653211    11           224566676665  7888874

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.19  E-value=0.00075  Score=59.76  Aligned_cols=76  Identities=11%  Similarity=-0.035  Sum_probs=49.2

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcc-cccCCCCCCCceEEEEccCCChhhHHHHhc-CccEE
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSH-LFALPGAGDANLRVFEADVLDSGAVSRAVE-GCKGV   84 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~-~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-~~d~v   84 (278)
                      +++|+++|||++| +|...++.|.+.|+ .|.+.+++...... ...+...   ++.+..++.  +..   .+. ++|.|
T Consensus         3 ~~~k~v~v~G~g~-~G~s~a~~l~~~G~-~V~~~d~~~~~~~~~~~~l~~~---g~~~~~~~~--~~~---~~~~~~d~v   72 (447)
T PRK02472          3 YQNKKVLVLGLAK-SGYAAAKLLHKLGA-NVTVNDGKPFSENPEAQELLEE---GIKVICGSH--PLE---LLDEDFDLM   72 (447)
T ss_pred             cCCCEEEEEeeCH-HHHHHHHHHHHCCC-EEEEEcCCCccchhHHHHHHhc---CCEEEeCCC--CHH---HhcCcCCEE
Confidence            5678999999987 99999999999999 88888765432211 1112111   444443322  111   233 48999


Q ss_pred             EEecccCC
Q 023689           85 FHVASPCT   92 (278)
Q Consensus        85 i~~a~~~~   92 (278)
                      |..+|+..
T Consensus        73 V~s~gi~~   80 (447)
T PRK02472         73 VKNPGIPY   80 (447)
T ss_pred             EECCCCCC
Confidence            99988744

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.15  E-value=0.0095  Score=50.97  Aligned_cols=106  Identities=18%  Similarity=0.070  Sum_probs=67.5

Q ss_pred             cccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccC--------------------CCC-CCCceEE
Q 023689            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL--------------------PGA-GDANLRV   63 (278)
Q Consensus         5 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~--------------------~~~-~~~~v~~   63 (278)
                      .+++..+|+|.|+ |++|+++++.|...|...+++++.+.-....+...                    ... ...+++.
T Consensus        24 ~~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~  102 (355)
T PRK05597         24 QSLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTV  102 (355)
T ss_pred             HHHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEE
Confidence            3456679999988 99999999999999987888887754333222211                    000 1124555


Q ss_pred             EEccCCChhhHHHHhcCccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEec
Q 023689           64 FEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS  130 (278)
Q Consensus        64 ~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~S  130 (278)
                      +...++ .+...+.++++|+||.+..         ...        .-..+-++|.+.++ .+|+.+
T Consensus       103 ~~~~i~-~~~~~~~~~~~DvVvd~~d---------~~~--------~r~~~n~~c~~~~i-p~v~~~  150 (355)
T PRK05597        103 SVRRLT-WSNALDELRDADVILDGSD---------NFD--------TRHLASWAAARLGI-PHVWAS  150 (355)
T ss_pred             EEeecC-HHHHHHHHhCCCEEEECCC---------CHH--------HHHHHHHHHHHcCC-CEEEEE
Confidence            555554 3456677889999998742         111        12235567777775 477755

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=97.15  E-value=0.0095  Score=48.18  Aligned_cols=105  Identities=14%  Similarity=0.100  Sum_probs=65.9

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc--------------------CCCC-CCCceEEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA--------------------LPGA-GDANLRVF   64 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~--------------------~~~~-~~~~v~~~   64 (278)
                      +++.++|+|.|+ |++|+++++.|...|...+++++.+.-....+..                    +... ...+++.+
T Consensus        29 ~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~  107 (245)
T PRK05690         29 KLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETI  107 (245)
T ss_pred             HhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEE
Confidence            445679999998 9999999999999998777777664332222211                    0000 11244555


Q ss_pred             EccCCChhhHHHHhcCccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEec
Q 023689           65 EADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS  130 (278)
Q Consensus        65 ~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~S  130 (278)
                      ...++ .+.+.+.++++|+||.+..         .+.        .-..+-++|++++. .+|+.+
T Consensus       108 ~~~i~-~~~~~~~~~~~DiVi~~~D---------~~~--------~r~~ln~~~~~~~i-p~v~~~  154 (245)
T PRK05690        108 NARLD-DDELAALIAGHDLVLDCTD---------NVA--------TRNQLNRACFAAKK-PLVSGA  154 (245)
T ss_pred             eccCC-HHHHHHHHhcCCEEEecCC---------CHH--------HHHHHHHHHHHhCC-EEEEee
Confidence            55554 4556778889999998742         111        12245677878774 577644

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=97.13  E-value=0.0036  Score=52.39  Aligned_cols=115  Identities=15%  Similarity=0.107  Sum_probs=71.1

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccc-ccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEec
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL-FALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~-~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a   88 (278)
                      |||-|.|+ |.+|..++..|...|..+|++.+...+..... ..+....  ........+.-..++.+ ++++|+||-++
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~--~~~~~~~~i~~t~d~~~-~~~aDiVIita   77 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEAS--PVGGFDTKVTGTNNYAD-TANSDIVVITA   77 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhh--hccCCCcEEEecCCHHH-hCCCCEEEEcC
Confidence            58999997 99999999999998753577777754432211 0010000  00000111211122343 68999999999


Q ss_pred             ccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCE-EEEec
Q 023689           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRR-VVVTS  130 (278)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~-~v~~S  130 (278)
                      +.....  .......+..|+.....+++...+++... +|.+|
T Consensus        78 g~p~~~--~~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~t  118 (305)
T TIGR01763        78 GLPRKP--GMSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVS  118 (305)
T ss_pred             CCCCCc--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            864432  23566788999999999999888875443 44444

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.13  E-value=0.003  Score=53.80  Aligned_cols=96  Identities=15%  Similarity=0.105  Sum_probs=54.1

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCe---EEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTS---INATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~---v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      |++|-|.||||++|+.+++.|+++..-.   +..+..+. .......+.+    . .....++.+++.    ++++|++|
T Consensus         1 m~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~~-sg~~~~~f~g----~-~~~v~~~~~~~~----~~~~Divf   70 (369)
T PRK06598          1 MKKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTSQ-AGGAAPSFGG----K-EGTLQDAFDIDA----LKKLDIII   70 (369)
T ss_pred             CeEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecchh-hCCcccccCC----C-cceEEecCChhH----hcCCCEEE
Confidence            4689999999999999999777664323   55544332 2222222221    1 112234443332    46799999


Q ss_pred             EecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCC-EEEEecce
Q 023689           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTSSI  132 (278)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~-~~v~~Ss~  132 (278)
                      .+++...                  ...+...+.+.|.+ .+|=.||.
T Consensus        71 ~a~~~~~------------------s~~~~~~~~~aG~~~~VID~Ss~  100 (369)
T PRK06598         71 TCQGGDY------------------TNEVYPKLRAAGWQGYWIDAAST  100 (369)
T ss_pred             ECCCHHH------------------HHHHHHHHHhCCCCeEEEECChH
Confidence            8764311                  33456666666753 35555553

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=97.13  E-value=0.0036  Score=52.29  Aligned_cols=111  Identities=15%  Similarity=0.147  Sum_probs=72.8

Q ss_pred             EEEeCcchhhHHHHHHHHHHCCC-CeEEEEecCCCCCcccc-cCCCCCC--CceEEEEccCCChhhHHHHhcCccEEEEe
Q 023689           12 VCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLF-ALPGAGD--ANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (278)
Q Consensus        12 vlItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~~-~~~~~~~--~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~   87 (278)
                      |.|.|+ |.+|..++-.|+..|. +++.+++.+.+...... .+.....  ...++...  .|    .+.++++|+||.+
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~----~~~l~~aDiVIit   73 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GD----YADAADADIVVIT   73 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CC----HHHhCCCCEEEEc
Confidence            468887 8899999999998883 37888888665432221 1111000  01122111  11    3478999999999


Q ss_pred             cccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      ||.....  ..+....+..|+...+.+.+..++++.+.++.+-|
T Consensus        74 ag~p~~~--~~~R~~l~~~n~~i~~~~~~~i~~~~p~~~viv~s  115 (300)
T cd00300          74 AGAPRKP--GETRLDLINRNAPILRSVITNLKKYGPDAIILVVS  115 (300)
T ss_pred             CCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            9875432  34567889999999999999999887554444443

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.11  E-value=0.00057  Score=56.50  Aligned_cols=79  Identities=14%  Similarity=-0.051  Sum_probs=53.8

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      .++++++|.|+ |+.|+.++..|.+.|..+|++..|+.++.+.+........ .+  .  .+...+++...+..+|+|||
T Consensus       123 ~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~-~~--~--~~~~~~~~~~~~~~~DiVIn  196 (282)
T TIGR01809       123 LAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVG-VI--T--RLEGDSGGLAIEKAAEVLVS  196 (282)
T ss_pred             cCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcC-cc--e--eccchhhhhhcccCCCEEEE
Confidence            45789999988 9999999999999998789999998776655543211000 11  1  11111334556678999999


Q ss_pred             ecccC
Q 023689           87 VASPC   91 (278)
Q Consensus        87 ~a~~~   91 (278)
                      +....
T Consensus       197 aTp~g  201 (282)
T TIGR01809       197 TVPAD  201 (282)
T ss_pred             CCCCC
Confidence            97653

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=97.11  E-value=0.0015  Score=54.07  Aligned_cols=81  Identities=15%  Similarity=0.054  Sum_probs=51.4

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCC---CCcccccCCCC-CCCceEEEEccCCChhhHHHHhcCcc
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS---DSSHLFALPGA-GDANLRVFEADVLDSGAVSRAVEGCK   82 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~---~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~~~~~~~~~d   82 (278)
                      .++|+++|.|+ |+.+++++..|...|..+|.+..|+.+   +.+.+...... ....+.+  .++.+.+.+.+.+.++|
T Consensus       122 ~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~--~~~~~~~~l~~~~~~aD  198 (288)
T PRK12749        122 IKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTV--TDLADQQAFAEALASAD  198 (288)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEE--echhhhhhhhhhcccCC
Confidence            45689999998 666999999999999878999999754   33333221110 0001222  22322333555677899


Q ss_pred             EEEEeccc
Q 023689           83 GVFHVASP   90 (278)
Q Consensus        83 ~vi~~a~~   90 (278)
                      +|||+...
T Consensus       199 ivINaTp~  206 (288)
T PRK12749        199 ILTNGTKV  206 (288)
T ss_pred             EEEECCCC
Confidence            99998644

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=97.10  E-value=0.004  Score=48.89  Aligned_cols=75  Identities=20%  Similarity=0.138  Sum_probs=52.8

Q ss_pred             ccccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCc
Q 023689            2 ASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGC   81 (278)
Q Consensus         2 ~~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~   81 (278)
                      |-|-+++++++||.|| |-+|..-++.|++.|+ .|+++..+..  +.+..+...+  +++++..+...     ..++++
T Consensus         2 P~~l~l~gk~vlVvGg-G~va~rk~~~Ll~~ga-~VtVvsp~~~--~~l~~l~~~~--~i~~~~~~~~~-----~dl~~~   70 (205)
T TIGR01470         2 PVFANLEGRAVLVVGG-GDVALRKARLLLKAGA-QLRVIAEELE--SELTLLAEQG--GITWLARCFDA-----DILEGA   70 (205)
T ss_pred             CeEEEcCCCeEEEECc-CHHHHHHHHHHHHCCC-EEEEEcCCCC--HHHHHHHHcC--CEEEEeCCCCH-----HHhCCc
Confidence            3455788999999998 9999999999999999 7877754332  2222221111  78888888753     235778


Q ss_pred             cEEEEe
Q 023689           82 KGVFHV   87 (278)
Q Consensus        82 d~vi~~   87 (278)
                      |.||-+
T Consensus        71 ~lVi~a   76 (205)
T TIGR01470        71 FLVIAA   76 (205)
T ss_pred             EEEEEC
Confidence            888744

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=97.10  E-value=0.00057  Score=52.88  Aligned_cols=66  Identities=15%  Similarity=0.054  Sum_probs=42.5

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEE-ecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEe
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINAT-VFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~-~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~   87 (278)
                      ||++.|. |+|-||+.|+++|.+.|| +|+.. +|.++.........+     ..      -...+..++++.+|+||-.
T Consensus         1 m~~~~i~-GtGniG~alA~~~a~ag~-eV~igs~r~~~~~~a~a~~l~-----~~------i~~~~~~dA~~~aDVVvLA   67 (211)
T COG2085           1 MMIIAII-GTGNIGSALALRLAKAGH-EVIIGSSRGPKALAAAAAALG-----PL------ITGGSNEDAAALADVVVLA   67 (211)
T ss_pred             CcEEEEe-ccChHHHHHHHHHHhCCC-eEEEecCCChhHHHHHHHhhc-----cc------cccCChHHHHhcCCEEEEe
Confidence            4566665 559999999999999999 56555 555443333322111     00      2234567788889999865

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=97.09  E-value=0.00073  Score=61.53  Aligned_cols=70  Identities=13%  Similarity=0.179  Sum_probs=57.2

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHH-hcCccEEEEe
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFHV   87 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~-~~~~d~vi~~   87 (278)
                      .+++|.|. |-+|+++++.|.++|+ +|++++.+++..+..++.      +...+.+|.+|++.++++ ++++|.++-+
T Consensus       418 ~hiiI~G~-G~~G~~la~~L~~~g~-~vvvId~d~~~~~~~~~~------g~~~i~GD~~~~~~L~~a~i~~a~~viv~  488 (558)
T PRK10669        418 NHALLVGY-GRVGSLLGEKLLAAGI-PLVVIETSRTRVDELRER------GIRAVLGNAANEEIMQLAHLDCARWLLLT  488 (558)
T ss_pred             CCEEEECC-ChHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHC------CCeEEEcCCCCHHHHHhcCccccCEEEEE
Confidence            36889987 9999999999999999 888888877665555432      788999999999988875 5688877654

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=97.09  E-value=0.0028  Score=55.78  Aligned_cols=76  Identities=16%  Similarity=0.136  Sum_probs=53.0

Q ss_pred             ccCCceEEEeCc----------------chhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCC
Q 023689            6 EKEEETVCVTGA----------------NGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVL   69 (278)
Q Consensus         6 ~~~~~~vlItGa----------------tG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~   69 (278)
                      .++||+||||+|                ||-.|.+|++.+...|+ +|+.+.-... ...    +    .+++.+.  +.
T Consensus       253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA-~VtlI~Gp~~-~~~----p----~~v~~i~--V~  320 (475)
T PRK13982        253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGA-EVTLISGPVD-LAD----P----QGVKVIH--VE  320 (475)
T ss_pred             ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCC-cEEEEeCCcC-CCC----C----CCceEEE--ec
Confidence            478999999987                79999999999999999 7877753221 110    1    1555554  33


Q ss_pred             ChhhHHHHhc---CccEEEEecccCCC
Q 023689           70 DSGAVSRAVE---GCKGVFHVASPCTL   93 (278)
Q Consensus        70 d~~~~~~~~~---~~d~vi~~a~~~~~   93 (278)
                      ...++.+++.   ..|++|++|++..+
T Consensus       321 ta~eM~~av~~~~~~Di~I~aAAVaDy  347 (475)
T PRK13982        321 SARQMLAAVEAALPADIAIFAAAVADW  347 (475)
T ss_pred             CHHHHHHHHHhhCCCCEEEEeccccce
Confidence            4445555543   37999999998654

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=97.09  E-value=0.0094  Score=51.22  Aligned_cols=105  Identities=17%  Similarity=0.153  Sum_probs=66.2

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccC--------------------CCC-CCCceEEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL--------------------PGA-GDANLRVF   64 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~--------------------~~~-~~~~v~~~   64 (278)
                      ++...+|+|.|+ |++|.++++.|...|...+++.+.+.-....+...                    ... ...+++.+
T Consensus        38 ~l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~  116 (370)
T PRK05600         38 RLHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNAL  116 (370)
T ss_pred             HhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEEe
Confidence            455679999988 99999999999999987888887753332222211                    000 11245555


Q ss_pred             EccCCChhhHHHHhcCccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEec
Q 023689           65 EADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS  130 (278)
Q Consensus        65 ~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~S  130 (278)
                      ...++ .+.+.++++++|+||.+.-         ....        -..+-++|.+.++ .+|+.+
T Consensus       117 ~~~i~-~~~~~~~~~~~DlVid~~D---------n~~~--------r~~in~~~~~~~i-P~v~~~  163 (370)
T PRK05600        117 RERLT-AENAVELLNGVDLVLDGSD---------SFAT--------KFLVADAAEITGT-PLVWGT  163 (370)
T ss_pred             eeecC-HHHHHHHHhCCCEEEECCC---------CHHH--------HHHHHHHHHHcCC-CEEEEE
Confidence            55554 4567778889999987742         1211        2234567777775 466654

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.07  E-value=0.00099  Score=55.11  Aligned_cols=76  Identities=17%  Similarity=0.152  Sum_probs=52.1

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCC-CCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP-GAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~-~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      .++++++|.|+ |+.|+.++..|.+.|..+|++..|+.++.+.+.... .... ...+..     .+++.+.+.++|+||
T Consensus       125 ~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~-~~~~~~-----~~~~~~~~~~aDiVI  197 (284)
T PRK12549        125 ASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFP-AARATA-----GSDLAAALAAADGLV  197 (284)
T ss_pred             ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCC-CeEEEe-----ccchHhhhCCCCEEE
Confidence            45689999998 889999999999999878999999876655543211 1111 122211     133455678899999


Q ss_pred             Eecc
Q 023689           86 HVAS   89 (278)
Q Consensus        86 ~~a~   89 (278)
                      ++..
T Consensus       198 naTp  201 (284)
T PRK12549        198 HATP  201 (284)
T ss_pred             ECCc
Confidence            9954

>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed

Probab=97.07  E-value=0.0027  Score=54.79  Aligned_cols=67  Identities=19%  Similarity=0.216  Sum_probs=52.4

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      ||+|+|.|+ |.+|+.++..+.+.|+ .|++++.++.....  .+      .-.++.+|..|.+.+.++++.+|+|.
T Consensus         2 ~~~igilG~-Gql~~ml~~aa~~lG~-~v~~~d~~~~~pa~--~~------ad~~~~~~~~D~~~l~~~a~~~dvit   68 (372)
T PRK06019          2 MKTIGIIGG-GQLGRMLALAAAPLGY-KVIVLDPDPDSPAA--QV------ADEVIVADYDDVAALRELAEQCDVIT   68 (372)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCC-EEEEEeCCCCCchh--Hh------CceEEecCCCCHHHHHHHHhcCCEEE
Confidence            578999999 8999999999999999 88888765433211  11      22356689999999999999999875

>PRK08057 cobalt-precorrin-6x reductase; Reviewed

Probab=97.04  E-value=0.018  Score=46.45  Aligned_cols=95  Identities=13%  Similarity=0.103  Sum_probs=68.4

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc--CccEEEE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFH   86 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vi~   86 (278)
                      |++|||.|||+ =|+.|++.|.+.|+ .++..+......  ...      ..+....+-+.|.+.+.+.++  +++.||+
T Consensus         2 ~~~IlvlgGT~-egr~la~~L~~~g~-~v~~Svat~~g~--~~~------~~~~v~~G~l~~~~~l~~~l~~~~i~~VID   71 (248)
T PRK08057          2 MPRILLLGGTS-EARALARALAAAGV-DIVLSLAGRTGG--PAD------LPGPVRVGGFGGAEGLAAYLREEGIDLVID   71 (248)
T ss_pred             CceEEEEechH-HHHHHHHHHHhCCC-eEEEEEccCCCC--ccc------CCceEEECCCCCHHHHHHHHHHCCCCEEEE
Confidence            57899999975 69999999999998 776666544332  111      166777888879899999987  7899999


Q ss_pred             ecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEE
Q 023689           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVV  128 (278)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~  128 (278)
                      ...+..               ...+.++.++|++.++..+=|
T Consensus        72 ATHPfA---------------~~is~~a~~ac~~~~ipyiR~   98 (248)
T PRK08057         72 ATHPYA---------------AQISANAAAACRALGIPYLRL   98 (248)
T ss_pred             CCCccH---------------HHHHHHHHHHHHHhCCcEEEE
Confidence            865422               223567778887777654443

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.04  E-value=0.0015  Score=56.11  Aligned_cols=75  Identities=15%  Similarity=0.049  Sum_probs=55.1

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEe
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~   87 (278)
                      ..++++|+|+ |-+|+..++.|...|. +|++.+|+++..+.+....     . ..+..+..+.+.+.+.++++|+||++
T Consensus       166 ~~~~VlViGa-G~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~-----g-~~v~~~~~~~~~l~~~l~~aDvVI~a  237 (370)
T TIGR00518       166 EPGDVTIIGG-GVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEF-----G-GRIHTRYSNAYEIEDAVKRADLLIGA  237 (370)
T ss_pred             CCceEEEEcC-CHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhc-----C-ceeEeccCCHHHHHHHHccCCEEEEc
Confidence            4568999988 8999999999999999 7888888765433332211     1 12234556677888899999999998


Q ss_pred             ccc
Q 023689           88 ASP   90 (278)
Q Consensus        88 a~~   90 (278)
                      +..
T Consensus       238 ~~~  240 (370)
T TIGR00518       238 VLI  240 (370)
T ss_pred             ccc
Confidence            754

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.00  E-value=0.0036  Score=54.04  Aligned_cols=106  Identities=19%  Similarity=0.145  Sum_probs=65.3

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc--------------------CCCC-CCCceEEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA--------------------LPGA-GDANLRVF   64 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~--------------------~~~~-~~~~v~~~   64 (278)
                      +++.++|+|.|+ |++|+++++.|...|...+++++++.-....+..                    +... ...+++.+
T Consensus       132 ~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~  210 (376)
T PRK08762        132 RLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAV  210 (376)
T ss_pred             HHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEE
Confidence            455679999977 8899999999999998788888775221111110                    1000 11133444


Q ss_pred             EccCCChhhHHHHhcCccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           65 EADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        65 ~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      ...+. .+.+.+.++++|+||++..         ....        -..+-++|.+.++ .+|+.+.
T Consensus       211 ~~~~~-~~~~~~~~~~~D~Vv~~~d---------~~~~--------r~~ln~~~~~~~i-p~i~~~~  258 (376)
T PRK08762        211 QERVT-SDNVEALLQDVDVVVDGAD---------NFPT--------RYLLNDACVKLGK-PLVYGAV  258 (376)
T ss_pred             eccCC-hHHHHHHHhCCCEEEECCC---------CHHH--------HHHHHHHHHHcCC-CEEEEEe
Confidence            44443 3456777888999998742         1111        1235577888875 5777653

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=97.00  E-value=0.0033  Score=47.08  Aligned_cols=69  Identities=12%  Similarity=0.146  Sum_probs=45.4

Q ss_pred             cccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEE
Q 023689            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (278)
Q Consensus         5 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~v   84 (278)
                      -++++++|+|.|| |-+|...++.|++.|+ .|+.+.  ++..+.+..+.     .+++..-.+..     .-++++|.|
T Consensus         9 l~l~~~~vlVvGG-G~va~rka~~Ll~~ga-~V~VIs--p~~~~~l~~l~-----~i~~~~~~~~~-----~dl~~a~lV   74 (157)
T PRK06719          9 FNLHNKVVVIIGG-GKIAYRKASGLKDTGA-FVTVVS--PEICKEMKELP-----YITWKQKTFSN-----DDIKDAHLI   74 (157)
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHhCCC-EEEEEc--CccCHHHHhcc-----CcEEEecccCh-----hcCCCceEE
Confidence            4678999999998 9999999999999999 777663  33333333221     34444333322     125677877


Q ss_pred             EEe
Q 023689           85 FHV   87 (278)
Q Consensus        85 i~~   87 (278)
                      |-+
T Consensus        75 iaa   77 (157)
T PRK06719         75 YAA   77 (157)
T ss_pred             EEC
Confidence            754

>KOG2018 consensus Predicted dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis [Posttranslational modification, protein turnover, chaperones]

Probab=97.00  E-value=0.0071  Score=49.40  Aligned_cols=42  Identities=26%  Similarity=0.432  Sum_probs=32.7

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCC
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD   46 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~   46 (278)
                      |.++++.-|+|.|+ |++|++++.-|++.|+..+.+++-+.-.
T Consensus        69 m~kl~~syVVVVG~-GgVGSwv~nmL~RSG~qKi~iVDfdqVS  110 (430)
T KOG2018|consen   69 MEKLTNSYVVVVGA-GGVGSWVANMLLRSGVQKIRIVDFDQVS  110 (430)
T ss_pred             HHHhcCcEEEEEec-CchhHHHHHHHHHhcCceEEEechhhcc
Confidence            44555666888877 9999999999999999777777664433

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=97.00  E-value=0.0012  Score=55.40  Aligned_cols=73  Identities=15%  Similarity=0.111  Sum_probs=52.9

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      +.+++|+|.|+ |-+|..+++.|...|.+.|++..|++++...+....     +.     +..+.+++.+.+..+|+||.
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~-----g~-----~~~~~~~~~~~l~~aDvVi~  244 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKEL-----GG-----NAVPLDELLELLNEADVVIS  244 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc-----CC-----eEEeHHHHHHHHhcCCEEEE
Confidence            46789999988 999999999999877658888888766543332211     11     22233467777889999998


Q ss_pred             eccc
Q 023689           87 VASP   90 (278)
Q Consensus        87 ~a~~   90 (278)
                      +.+.
T Consensus       245 at~~  248 (311)
T cd05213         245 ATGA  248 (311)
T ss_pred             CCCC
Confidence            8764

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.99  E-value=0.0033  Score=51.82  Aligned_cols=56  Identities=14%  Similarity=0.181  Sum_probs=45.3

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      .+++|+++|.|++|.+|+.++..|+++|+ .|+...|+.                           ..+.+.++++|+||
T Consensus       156 ~l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~t---------------------------~~L~~~~~~aDIvI  207 (283)
T PRK14192        156 ELAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSRT---------------------------QNLPELVKQADIIV  207 (283)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCCc---------------------------hhHHHHhccCCEEE
Confidence            45789999999999999999999999999 777665411                           23556668999999


Q ss_pred             Eecc
Q 023689           86 HVAS   89 (278)
Q Consensus        86 ~~a~   89 (278)
                      ++.|
T Consensus       208 ~AtG  211 (283)
T PRK14192        208 GAVG  211 (283)
T ss_pred             EccC
Confidence            9986

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=96.99  E-value=0.015  Score=46.52  Aligned_cols=108  Identities=12%  Similarity=0.164  Sum_probs=64.4

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCC--------------------CC-CCCceE
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP--------------------GA-GDANLR   62 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~--------------------~~-~~~~v~   62 (278)
                      |..++..+|+|.|. |++|+++++.|...|...+++++.+.-....+....                    .. ...+++
T Consensus         6 ~~~L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~   84 (231)
T cd00755           6 LEKLRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVD   84 (231)
T ss_pred             HHHHhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEE
Confidence            34566789999988 999999999999999878887776442222221100                    00 011344


Q ss_pred             EEEccCCChhhHHHHhc-CccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           63 VFEADVLDSGAVSRAVE-GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        63 ~~~~Dl~d~~~~~~~~~-~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      .+...++ ++.+.+.+. ++|+||.+..         .        ...-..+.++|++.+++ +|...+
T Consensus        85 ~~~~~i~-~~~~~~l~~~~~D~VvdaiD---------~--------~~~k~~L~~~c~~~~ip-~I~s~g  135 (231)
T cd00755          85 AVEEFLT-PDNSEDLLGGDPDFVVDAID---------S--------IRAKVALIAYCRKRKIP-VISSMG  135 (231)
T ss_pred             EeeeecC-HhHHHHHhcCCCCEEEEcCC---------C--------HHHHHHHHHHHHHhCCC-EEEEeC
Confidence            4444443 344555553 5888887631         1        12234577888888754 555443

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.97  E-value=0.0011  Score=57.04  Aligned_cols=76  Identities=18%  Similarity=0.171  Sum_probs=61.7

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      +++++++||.|| |=+|.-+++.|.+.|...|++..|..+++..+..-.       .   ++....+.+...+..+|+||
T Consensus       175 ~L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~-------~---~~~~~l~el~~~l~~~DvVi  243 (414)
T COG0373         175 SLKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKL-------G---AEAVALEELLEALAEADVVI  243 (414)
T ss_pred             ccccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHh-------C---CeeecHHHHHHhhhhCCEEE
Confidence            357899999999 999999999999999779999999887776654421       1   55667778899999999999


Q ss_pred             EecccCC
Q 023689           86 HVASPCT   92 (278)
Q Consensus        86 ~~a~~~~   92 (278)
                      -+.+...
T Consensus       244 ssTsa~~  250 (414)
T COG0373         244 SSTSAPH  250 (414)
T ss_pred             EecCCCc
Confidence            9876544

>PLN00203 glutamyl-tRNA reductase

Probab=96.96  E-value=0.0011  Score=59.23  Aligned_cols=76  Identities=20%  Similarity=0.173  Sum_probs=54.6

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      +.+++|+|.|+ |.+|+.+++.|...|...|++..|+.+....+....+    ++..   .+...+++.+++.++|+||.
T Consensus       264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~----g~~i---~~~~~~dl~~al~~aDVVIs  335 (519)
T PLN00203        264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFP----DVEI---IYKPLDEMLACAAEADVVFT  335 (519)
T ss_pred             CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhC----CCce---EeecHhhHHHHHhcCCEEEE
Confidence            56789999999 9999999999999997679999888766555433111    1111   12233456778889999998


Q ss_pred             eccc
Q 023689           87 VASP   90 (278)
Q Consensus        87 ~a~~   90 (278)
                      +.+.
T Consensus       336 AT~s  339 (519)
T PLN00203        336 STSS  339 (519)
T ss_pred             ccCC
Confidence            7654

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.95  E-value=0.00098  Score=52.14  Aligned_cols=39  Identities=26%  Similarity=0.316  Sum_probs=33.2

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCC
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD   46 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~   46 (278)
                      ++++|+++|+|. |.+|+++++.|.+.|+ +|++.+++.+.
T Consensus        25 ~l~gk~v~I~G~-G~vG~~~A~~L~~~G~-~Vvv~D~~~~~   63 (200)
T cd01075          25 SLEGKTVAVQGL-GKVGYKLAEHLLEEGA-KLIVADINEEA   63 (200)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCC-EEEEEcCCHHH
Confidence            466899999998 6899999999999999 88877776543

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.95  E-value=0.0015  Score=57.35  Aligned_cols=73  Identities=16%  Similarity=0.169  Sum_probs=53.2

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      +.+++++|+|+ |.+|+.+++.|...|...|++..|+.+....+....     +     ++..+.+++.+.+.++|+||.
T Consensus       180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~-----g-----~~~~~~~~~~~~l~~aDvVI~  248 (423)
T PRK00045        180 LSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEF-----G-----GEAIPLDELPEALAEADIVIS  248 (423)
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc-----C-----CcEeeHHHHHHHhccCCEEEE
Confidence            56789999987 999999999999999767888888765544332211     1     122333566777889999999


Q ss_pred             eccc
Q 023689           87 VASP   90 (278)
Q Consensus        87 ~a~~   90 (278)
                      +.+.
T Consensus       249 aT~s  252 (423)
T PRK00045        249 STGA  252 (423)
T ss_pred             CCCC
Confidence            8754

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.94  E-value=0.004  Score=51.12  Aligned_cols=58  Identities=16%  Similarity=0.181  Sum_probs=47.3

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      ++.+|+++|+|+++.+|+.++..|.++|+ .|+...++.                           ..+.+.++++|+||
T Consensus       155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~ga-tVtv~~s~t---------------------------~~l~~~~~~ADIVI  206 (286)
T PRK14175        155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNA-SVTILHSRS---------------------------KDMASYLKDADVIV  206 (286)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCc---------------------------hhHHHHHhhCCEEE
Confidence            46789999999999999999999999999 676554321                           24677889999999


Q ss_pred             EecccC
Q 023689           86 HVASPC   91 (278)
Q Consensus        86 ~~a~~~   91 (278)
                      ...|..
T Consensus       207 sAvg~p  212 (286)
T PRK14175        207 SAVGKP  212 (286)
T ss_pred             ECCCCC
Confidence            888763

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=96.94  E-value=0.019  Score=47.99  Aligned_cols=102  Identities=21%  Similarity=0.217  Sum_probs=63.8

Q ss_pred             eEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCC--------------------C-CCCCceEEEEccCC
Q 023689           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP--------------------G-AGDANLRVFEADVL   69 (278)
Q Consensus        11 ~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~--------------------~-~~~~~v~~~~~Dl~   69 (278)
                      +|||.|+ |++|.++++.|...|...+.+++.+.-....+....                    . ....+++.+..++.
T Consensus         1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~   79 (312)
T cd01489           1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIK   79 (312)
T ss_pred             CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCC
Confidence            5899997 999999999999999888888876544333332110                    0 01124556666776


Q ss_pred             ChhhHHHHhcCccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           70 DSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        70 d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      +.+...+.++++|+||.+.         +.        ...-..+-+.|..+++ .+|..++
T Consensus        80 ~~~~~~~f~~~~DvVv~a~---------Dn--------~~ar~~in~~c~~~~i-p~I~~gt  123 (312)
T cd01489          80 DPDFNVEFFKQFDLVFNAL---------DN--------LAARRHVNKMCLAADV-PLIESGT  123 (312)
T ss_pred             CccchHHHHhcCCEEEECC---------CC--------HHHHHHHHHHHHHCCC-CEEEEec
Confidence            5433456677888888652         11        1223345567777774 4676554

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=96.93  E-value=0.0022  Score=54.17  Aligned_cols=45  Identities=20%  Similarity=0.147  Sum_probs=36.5

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccC
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL   53 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~   53 (278)
                      .+.+|||+||+|.+|..+++.+...|. .|+++++++++.+.+..+
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~-~Vi~~~~s~~~~~~~~~l  182 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKVAYLKKL  182 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHc
Confidence            367999999999999999998888899 788888876655555443

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=96.91  E-value=0.0015  Score=53.72  Aligned_cols=74  Identities=14%  Similarity=0.112  Sum_probs=48.5

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEe
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~   87 (278)
                      ++|+++|+|+ |.+|+.++..|.+.|+ .|++..|+.++.+.+........ .+...  +..+     ....++|+||++
T Consensus       116 ~~k~vliiGa-Gg~g~aia~~L~~~g~-~v~v~~R~~~~~~~la~~~~~~~-~~~~~--~~~~-----~~~~~~DivIna  185 (270)
T TIGR00507       116 PNQRVLIIGA-GGAARAVALPLLKADC-NVIIANRTVSKAEELAERFQRYG-EIQAF--SMDE-----LPLHRVDLIINA  185 (270)
T ss_pred             cCCEEEEEcC-cHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhcC-ceEEe--chhh-----hcccCccEEEEC
Confidence            4689999998 7999999999999998 88888887655443322111100 11211  1111     123578999999


Q ss_pred             cccC
Q 023689           88 ASPC   91 (278)
Q Consensus        88 a~~~   91 (278)
                      .+..
T Consensus       186 tp~g  189 (270)
T TIGR00507       186 TSAG  189 (270)
T ss_pred             CCCC
Confidence            8764

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=96.91  E-value=0.00057  Score=51.67  Aligned_cols=64  Identities=14%  Similarity=0.150  Sum_probs=46.7

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEe
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~   87 (278)
                      ||+|-+.|- |-+|+.+++.|.+.|+ .|.+.+|+++..+.+...      +       ..-.++..++++++|+|+-+
T Consensus         1 m~~Ig~IGl-G~mG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~------g-------~~~~~s~~e~~~~~dvvi~~   64 (163)
T PF03446_consen    1 MMKIGFIGL-GNMGSAMARNLAKAGY-EVTVYDRSPEKAEALAEA------G-------AEVADSPAEAAEQADVVILC   64 (163)
T ss_dssp             -BEEEEE---SHHHHHHHHHHHHTTT-EEEEEESSHHHHHHHHHT------T-------EEEESSHHHHHHHBSEEEE-
T ss_pred             CCEEEEEch-HHHHHHHHHHHHhcCC-eEEeeccchhhhhhhHHh------h-------hhhhhhhhhHhhcccceEee
Confidence            689999987 9999999999999999 899999887665554432      2       12224567788888999876

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=96.89  E-value=0.0017  Score=53.66  Aligned_cols=81  Identities=15%  Similarity=0.213  Sum_probs=52.4

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      .++|+++|.|+ |+.|++++..|.+.|+..+.+..|+.++.+.+................+   ...+.+.+..+|+|||
T Consensus       125 ~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~~---~~~~~~~~~~~divIN  200 (283)
T PRK14027        125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVD---ARGIEDVIAAADGVVN  200 (283)
T ss_pred             cCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEEecC---HhHHHHHHhhcCEEEE
Confidence            45689999998 9999999999999998788889887766555532111000010011122   2223444567899999


Q ss_pred             ecccC
Q 023689           87 VASPC   91 (278)
Q Consensus        87 ~a~~~   91 (278)
                      +....
T Consensus       201 aTp~G  205 (283)
T PRK14027        201 ATPMG  205 (283)
T ss_pred             cCCCC
Confidence            87543

>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms)

Probab=96.89  E-value=0.0094  Score=50.77  Aligned_cols=33  Identities=33%  Similarity=0.486  Sum_probs=26.9

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEec
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVF   42 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r   42 (278)
                      ++|.|+|+||++|++|++.|.+++..++..+..
T Consensus         1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~   33 (341)
T TIGR00978         1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVA   33 (341)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEE
Confidence            479999999999999999998876436666643

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.

>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]

Probab=96.88  E-value=0.0098  Score=47.70  Aligned_cols=37  Identities=32%  Similarity=0.459  Sum_probs=28.6

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCC-CCeEEEEecCCC
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNN-YTSINATVFPGS   45 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g-~~~v~~~~r~~~   45 (278)
                      |+||.|.|++|-+|+.+++.+.+.+ .+-+-++.|.++
T Consensus         2 ~iki~V~Ga~GRMG~~ii~~v~~~~~~~L~aa~~~~~~   39 (266)
T COG0289           2 MIKVAVAGASGRMGRTLIRAVLEAPDLELVAAFDRPGS   39 (266)
T ss_pred             CceEEEEcCCChHHHHHHHHHhcCCCceEEEEEecCCc
Confidence            5799999999999999999999876 434444455443

>PRK08655 prephenate dehydrogenase; Provisional

Probab=96.87  E-value=0.0016  Score=57.31  Aligned_cols=67  Identities=12%  Similarity=0.202  Sum_probs=46.4

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEecc
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a~   89 (278)
                      |+|.|+||+|.+|+.+++.|.+.|+ .|++..|+++.........     ++.     .  .....+.+.++|+||-+..
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~~G~-~V~v~~r~~~~~~~~a~~~-----gv~-----~--~~~~~e~~~~aDvVIlavp   67 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKEKGF-EVIVTGRDPKKGKEVAKEL-----GVE-----Y--ANDNIDAAKDADIVIISVP   67 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHHCCC-EEEEEECChHHHHHHHHHc-----CCe-----e--ccCHHHHhccCCEEEEecC
Confidence            4799999999999999999999998 8999888765432221100     221     1  1234556778898887753

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.84  E-value=0.005  Score=48.15  Aligned_cols=80  Identities=13%  Similarity=0.179  Sum_probs=52.6

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecC---CCCCcccc----cCC------------C-CCCCceEEEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFP---GSDSSHLF----ALP------------G-AGDANLRVFE   65 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~---~~~~~~~~----~~~------------~-~~~~~v~~~~   65 (278)
                      +++.++|+|.|+ |.+|+.++..|.+.|...+++.+++   .+......    .+.            . ....+++.+.
T Consensus        18 ~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~~   96 (200)
T TIGR02354        18 KLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAYD   96 (200)
T ss_pred             HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEee
Confidence            455679999998 8899999999999998678888776   22221100    000            0 0011344555


Q ss_pred             ccCCChhhHHHHhcCccEEEEe
Q 023689           66 ADVLDSGAVSRAVEGCKGVFHV   87 (278)
Q Consensus        66 ~Dl~d~~~~~~~~~~~d~vi~~   87 (278)
                      .+++ .+.+.++++++|+||.+
T Consensus        97 ~~i~-~~~~~~~~~~~DlVi~a  117 (200)
T TIGR02354        97 EKIT-EENIDKFFKDADIVCEA  117 (200)
T ss_pred             eeCC-HhHHHHHhcCCCEEEEC
Confidence            5554 45677788889999876

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK07574 formate dehydrogenase; Provisional

Probab=96.84  E-value=0.0053  Score=52.89  Aligned_cols=69  Identities=19%  Similarity=0.092  Sum_probs=49.9

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      ++.+|+|.|.|. |-||+.+++.|..-|. +|++.+|.....+....             .++.-..++.++++.+|+|+
T Consensus       189 ~L~gktVGIvG~-G~IG~~vA~~l~~fG~-~V~~~dr~~~~~~~~~~-------------~g~~~~~~l~ell~~aDvV~  253 (385)
T PRK07574        189 DLEGMTVGIVGA-GRIGLAVLRRLKPFDV-KLHYTDRHRLPEEVEQE-------------LGLTYHVSFDSLVSVCDVVT  253 (385)
T ss_pred             ecCCCEEEEECC-CHHHHHHHHHHHhCCC-EEEEECCCCCchhhHhh-------------cCceecCCHHHHhhcCCEEE
Confidence            467899999987 9999999999999999 89988876532211111             11222345888999999998


Q ss_pred             Eecc
Q 023689           86 HVAS   89 (278)
Q Consensus        86 ~~a~   89 (278)
                      .+..
T Consensus       254 l~lP  257 (385)
T PRK07574        254 IHCP  257 (385)
T ss_pred             EcCC
Confidence            7653

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.84  E-value=0.0022  Score=56.14  Aligned_cols=74  Identities=14%  Similarity=0.082  Sum_probs=53.1

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      .+.+++++|+|+ |.+|..+++.|...|...|++..|+.+....+....     +...     .+.+++.+.+.++|+||
T Consensus       177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~-----g~~~-----i~~~~l~~~l~~aDvVi  245 (417)
T TIGR01035       177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKEL-----GGEA-----VKFEDLEEYLAEADIVI  245 (417)
T ss_pred             CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc-----CCeE-----eeHHHHHHHHhhCCEEE
Confidence            356789999997 999999999999999558998988765543332211     1111     12346778888999999


Q ss_pred             Eeccc
Q 023689           86 HVASP   90 (278)
Q Consensus        86 ~~a~~   90 (278)
                      .+.+.
T Consensus       246 ~aT~s  250 (417)
T TIGR01035       246 SSTGA  250 (417)
T ss_pred             ECCCC
Confidence            98654

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.81  E-value=0.0018  Score=49.73  Aligned_cols=71  Identities=13%  Similarity=0.023  Sum_probs=49.5

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccE
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKG   83 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~   83 (278)
                      ..++.+++|.|.|. |-||+.+++.|..-|. +|++.+|...........      .        ....++.++++.+|+
T Consensus        31 ~~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~------~--------~~~~~l~ell~~aDi   94 (178)
T PF02826_consen   31 GRELRGKTVGIIGY-GRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEF------G--------VEYVSLDELLAQADI   94 (178)
T ss_dssp             BS-STTSEEEEEST-SHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHT------T--------EEESSHHHHHHH-SE
T ss_pred             ccccCCCEEEEEEE-cCCcCeEeeeeecCCc-eeEEecccCChhhhcccc------c--------ceeeehhhhcchhhh
Confidence            34667899999977 9999999999999999 999999877543311110      1        123467788899999


Q ss_pred             EEEeccc
Q 023689           84 VFHVASP   90 (278)
Q Consensus        84 vi~~a~~   90 (278)
                      |+.+...
T Consensus        95 v~~~~pl  101 (178)
T PF02826_consen   95 VSLHLPL  101 (178)
T ss_dssp             EEE-SSS
T ss_pred             hhhhhcc
Confidence            9877643

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.81  E-value=0.0047  Score=48.40  Aligned_cols=75  Identities=15%  Similarity=0.095  Sum_probs=49.3

Q ss_pred             ccccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCc
Q 023689            2 ASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGC   81 (278)
Q Consensus         2 ~~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~   81 (278)
                      |-|-++++|+|||.|| |-+|...++.|++.|+ .|+.+.+..  .+.+..+...  ..+.+..-++.     ...++++
T Consensus         3 Pl~l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga-~V~VIs~~~--~~~l~~l~~~--~~i~~~~~~~~-----~~~l~~a   71 (202)
T PRK06718          3 PLMIDLSNKRVVIVGG-GKVAGRRAITLLKYGA-HIVVISPEL--TENLVKLVEE--GKIRWKQKEFE-----PSDIVDA   71 (202)
T ss_pred             ceEEEcCCCEEEEECC-CHHHHHHHHHHHHCCC-eEEEEcCCC--CHHHHHHHhC--CCEEEEecCCC-----hhhcCCc
Confidence            4455788999999999 9999999999999998 887775432  2222221111  14555543332     2335778


Q ss_pred             cEEEEe
Q 023689           82 KGVFHV   87 (278)
Q Consensus        82 d~vi~~   87 (278)
                      |.||-+
T Consensus        72 dlViaa   77 (202)
T PRK06718         72 FLVIAA   77 (202)
T ss_pred             eEEEEc
Confidence            888754

>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form

Probab=96.80  E-value=0.0082  Score=49.82  Aligned_cols=82  Identities=9%  Similarity=0.076  Sum_probs=51.5

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEecc
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a~   89 (278)
                      -||.|.||||+.|.+|++.|..+.+-++..+..+..                    .   ++.+..++++++|++|.+..
T Consensus         2 ~~v~IvGasGy~G~el~rlL~~HP~~el~~l~s~~~--------------------~---~~~~~~~~~~~~D~vFlalp   58 (310)
T TIGR01851         2 PKVFIDGEAGTTGLQIRERLSGRDDIELLSIAPDRR--------------------K---DAAERAKLLNAADVAILCLP   58 (310)
T ss_pred             CeEEEECCCChhHHHHHHHHhCCCCeEEEEEecccc--------------------c---CcCCHhHhhcCCCEEEECCC
Confidence            379999999999999999999887645555533221                    0   11123456678999987642


Q ss_pred             cCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEeccee
Q 023689           90 PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSIS  133 (278)
Q Consensus        90 ~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~  133 (278)
                      ..        .          ...+...+.+.++ ++|=.|+..
T Consensus        59 ~~--------~----------s~~~~~~~~~~g~-~VIDlSadf   83 (310)
T TIGR01851        59 DD--------A----------AREAVSLVDNPNT-CIIDASTAY   83 (310)
T ss_pred             HH--------H----------HHHHHHHHHhCCC-EEEECChHH
Confidence            20        0          2234444545553 588777644

This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.78  E-value=0.029  Score=49.81  Aligned_cols=125  Identities=14%  Similarity=0.068  Sum_probs=70.9

Q ss_pred             ceEE----EeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689           10 ETVC----VTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus        10 ~~vl----ItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      ..+|    |+||+|.+|..+++.|...|. +|+...+..........      .++.-+..|.+..+...++.       
T Consensus        35 ~~~~~~~~l~~~~~g~~~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~------~~~~~~~~d~~~~~~~~~l~-------  100 (450)
T PRK08261         35 QPLLDGPVLVGGAGRLAEALAALLAGLGY-DVVANNDGGLTWAAGWG------DRFGALVFDATGITDPADLK-------  100 (450)
T ss_pred             CCCCCCceEEccCchhHHHHHHHHhhCCC-eeeecCccccccccCcC------CcccEEEEECCCCCCHHHHH-------
Confidence            3556    889999999999999999999 88876554432111110      03333334444333222211       


Q ss_pred             EecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhh
Q 023689           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYP  165 (278)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~  165 (278)
                                      ..    .......++.+.+  .++||+++|......   .                    ..|+
T Consensus       101 ----------------~~----~~~~~~~l~~l~~--~griv~i~s~~~~~~---~--------------------~~~~  135 (450)
T PRK08261        101 ----------------AL----YEFFHPVLRSLAP--CGRVVVLGRPPEAAA---D--------------------PAAA  135 (450)
T ss_pred             ----------------HH----HHHHHHHHHhccC--CCEEEEEccccccCC---c--------------------hHHH
Confidence                            00    0112222333222  358999988544211   0                    2477


Q ss_pred             hHHHHHHHHHHHHHHhc--CCceEEEecce
Q 023689          166 VSKTLAEKAAWEFAEKH--GVDVVAIHPAT  193 (278)
Q Consensus       166 ~sK~~~e~~~~~~~~~~--~~~~~~lrp~~  193 (278)
                      .+|...+.+.+.++.+.  ++.+..+.|+.
T Consensus       136 ~akaal~gl~rsla~E~~~gi~v~~i~~~~  165 (450)
T PRK08261        136 AAQRALEGFTRSLGKELRRGATAQLVYVAP  165 (450)
T ss_pred             HHHHHHHHHHHHHHHHhhcCCEEEEEecCC
Confidence            78888887777777653  77887787753

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.77  E-value=0.005  Score=50.86  Aligned_cols=57  Identities=12%  Similarity=0.152  Sum_probs=46.7

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      ++.||+|.|.|.+|.+|+.++..|+++|+ .|+...+...                           ++.++++.+|+||
T Consensus       156 ~l~Gk~V~vIG~s~ivG~PmA~~L~~~ga-tVtv~~~~t~---------------------------~l~e~~~~ADIVI  207 (301)
T PRK14194        156 DLTGKHAVVIGRSNIVGKPMAALLLQAHC-SVTVVHSRST---------------------------DAKALCRQADIVV  207 (301)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCC-EEEEECCCCC---------------------------CHHHHHhcCCEEE
Confidence            46799999999999999999999999999 7877644321                           4677788889999


Q ss_pred             Eeccc
Q 023689           86 HVASP   90 (278)
Q Consensus        86 ~~a~~   90 (278)
                      -+.|.
T Consensus       208 savg~  212 (301)
T PRK14194        208 AAVGR  212 (301)
T ss_pred             EecCC
Confidence            88765

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=96.76  E-value=0.0023  Score=58.72  Aligned_cols=70  Identities=17%  Similarity=0.193  Sum_probs=58.6

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHH-hcCccEEEEe
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFHV   87 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~-~~~~d~vi~~   87 (278)
                      ++|+|.|. |-+|+.+++.|.++|+ .+++++++++..+...+.      +...+.+|.+|++.++++ ++++|.++-+
T Consensus       401 ~~vII~G~-Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~------g~~v~~GDat~~~~L~~agi~~A~~vv~~  471 (601)
T PRK03659        401 PQVIIVGF-GRFGQVIGRLLMANKM-RITVLERDISAVNLMRKY------GYKVYYGDATQLELLRAAGAEKAEAIVIT  471 (601)
T ss_pred             CCEEEecC-chHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhC------CCeEEEeeCCCHHHHHhcCCccCCEEEEE
Confidence            57899986 9999999999999999 888998888766555443      778999999999988876 6788988865

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=96.76  E-value=0.0073  Score=51.03  Aligned_cols=75  Identities=19%  Similarity=0.085  Sum_probs=50.0

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHH---h--cCcc
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA---V--EGCK   82 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~---~--~~~d   82 (278)
                      .+.+++|+|+++.+|..+++.+...|+ .|+...++.+....+...      .... ..|..+.+....+   .  .++|
T Consensus       166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~------~~~~-~~~~~~~~~~~~~~~~~~~~~~d  237 (342)
T cd08266         166 PGETVLVHGAGSGVGSAAIQIAKLFGA-TVIATAGSEDKLERAKEL------GADY-VIDYRKEDFVREVRELTGKRGVD  237 (342)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHc------CCCe-EEecCChHHHHHHHHHhCCCCCc
Confidence            467999999999999999999999999 788887766544333222      1111 1344444333332   2  2589


Q ss_pred             EEEEeccc
Q 023689           83 GVFHVASP   90 (278)
Q Consensus        83 ~vi~~a~~   90 (278)
                      .++++++.
T Consensus       238 ~~i~~~g~  245 (342)
T cd08266         238 VVVEHVGA  245 (342)
T ss_pred             EEEECCcH
Confidence            99998763

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=96.75  E-value=0.0027  Score=54.01  Aligned_cols=44  Identities=18%  Similarity=0.141  Sum_probs=36.2

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA   52 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~   52 (278)
                      .+.++||+||+|.+|..+++.+...|. .|+++++++++.+.++.
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~-~Vi~~~~~~~~~~~~~~  194 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGC-YVVGSAGSDEKVDLLKN  194 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH
Confidence            367999999999999999998888999 78888887665555443

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional

Probab=96.75  E-value=0.0092  Score=49.82  Aligned_cols=34  Identities=15%  Similarity=0.164  Sum_probs=27.4

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEec
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVF   42 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r   42 (278)
                      +.+|.|.||||++|..|++.|.++..-++..+..
T Consensus         2 ~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s   35 (313)
T PRK11863          2 KPKVFIDGEAGTTGLQIRERLAGRSDIELLSIPE   35 (313)
T ss_pred             CcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEec
Confidence            3689999999999999999998887545554543

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=96.74  E-value=0.025  Score=49.15  Aligned_cols=111  Identities=19%  Similarity=0.074  Sum_probs=66.5

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccC--------------------CCCC-CCceEEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL--------------------PGAG-DANLRVF   64 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~--------------------~~~~-~~~v~~~   64 (278)
                      +++..+|||.|+ |++|+++++.|...|...+.+++.+.-....+...                    .... ..+++.+
T Consensus        39 ~L~~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~  117 (392)
T PRK07878         39 RLKNARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLH  117 (392)
T ss_pred             HHhcCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEE
Confidence            445679999988 99999999999999987777776644332222210                    0000 1134444


Q ss_pred             EccCCChhhHHHHhcCccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeec
Q 023689           65 EADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVP  137 (278)
Q Consensus        65 ~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~  137 (278)
                      ...++. +...+.++++|+||.+.         ++.        ..-..+-++|.+.++ .+|+.++ .++++
T Consensus       118 ~~~i~~-~~~~~~~~~~D~Vvd~~---------d~~--------~~r~~ln~~~~~~~~-p~v~~~~-~g~~G  170 (392)
T PRK07878        118 EFRLDP-SNAVELFSQYDLILDGT---------DNF--------ATRYLVNDAAVLAGK-PYVWGSI-YRFEG  170 (392)
T ss_pred             eccCCh-hHHHHHHhcCCEEEECC---------CCH--------HHHHHHHHHHHHcCC-CEEEEEe-ccCEE
Confidence            555543 44667788889888763         111        112235567777774 4777553 33333

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.73  E-value=0.03  Score=42.76  Aligned_cols=75  Identities=16%  Similarity=0.213  Sum_probs=48.5

Q ss_pred             eEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-------------------CCCC-CCCceEEEEccCCC
Q 023689           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-------------------LPGA-GDANLRVFEADVLD   70 (278)
Q Consensus        11 ~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-------------------~~~~-~~~~v~~~~~Dl~d   70 (278)
                      +|+|.|+ |.+|+++++.|...|..++++.+.+.-....+..                   +... ...+++.+...+..
T Consensus         1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~~   79 (174)
T cd01487           1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKIDE   79 (174)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecCh
Confidence            5899987 9999999999999998778888775422111110                   0000 11144445555533


Q ss_pred             hhhHHHHhcCccEEEEe
Q 023689           71 SGAVSRAVEGCKGVFHV   87 (278)
Q Consensus        71 ~~~~~~~~~~~d~vi~~   87 (278)
                       +.+.+.++++|+||.+
T Consensus        80 -~~~~~~l~~~DlVi~~   95 (174)
T cd01487          80 -NNLEGLFGDCDIVVEA   95 (174)
T ss_pred             -hhHHHHhcCCCEEEEC
Confidence             4567778888988876

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=96.73  E-value=0.0046  Score=53.32  Aligned_cols=35  Identities=20%  Similarity=0.345  Sum_probs=31.4

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecC
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFP   43 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~   43 (278)
                      .+++|.|.||.|.+|+.+++.|.+.|+ .|.+.+++
T Consensus        97 ~~~~I~IiGG~GlmG~slA~~l~~~G~-~V~~~d~~  131 (374)
T PRK11199         97 DLRPVVIVGGKGQLGRLFAKMLTLSGY-QVRILEQD  131 (374)
T ss_pred             ccceEEEEcCCChhhHHHHHHHHHCCC-eEEEeCCC
Confidence            357999999999999999999999998 88888774

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=96.71  E-value=0.033  Score=44.61  Aligned_cols=102  Identities=18%  Similarity=0.117  Sum_probs=62.1

Q ss_pred             eEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccC--CC-------------------CCCCceEEEEccCC
Q 023689           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL--PG-------------------AGDANLRVFEADVL   69 (278)
Q Consensus        11 ~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~--~~-------------------~~~~~v~~~~~Dl~   69 (278)
                      +|||.|+ |++|.++++.|...|...+.+++.+.-....+...  ..                   ....+++.+..++.
T Consensus         1 kVlvvG~-GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~   79 (234)
T cd01484           1 KVLLVGA-GGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVG   79 (234)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCC
Confidence            5899986 99999999999999987888887744333322110  00                   01124556666665


Q ss_pred             ChhhH-HHHhcCccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           70 DSGAV-SRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        70 d~~~~-~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      +...+ .+.++++|+||.+.         +.        ...-..+-+.|.+.++ .+|..++
T Consensus        80 ~~~~~~~~f~~~~DvVi~a~---------Dn--------~~aR~~ln~~c~~~~i-plI~~g~  124 (234)
T cd01484          80 PEQDFNDTFFEQFHIIVNAL---------DN--------IIARRYVNGMLIFLIV-PLIESGT  124 (234)
T ss_pred             hhhhchHHHHhCCCEEEECC---------CC--------HHHHHHHHHHHHHcCC-CEEEEcc
Confidence            43332 34667788887652         11        2223446667777774 4776554

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>PRK14851 hypothetical protein; Provisional

Probab=96.70  E-value=0.023  Score=52.67  Aligned_cols=107  Identities=13%  Similarity=0.164  Sum_probs=67.9

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccC--------------------CC-CCCCceEEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL--------------------PG-AGDANLRVF   64 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~--------------------~~-~~~~~v~~~   64 (278)
                      +++..+|+|.|. |++|++++..|...|..++++++.+.-...++...                    .. ....+++.+
T Consensus        40 kL~~~~VlIvG~-GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~~  118 (679)
T PRK14851         40 RLAEAKVAIPGM-GGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITPF  118 (679)
T ss_pred             HHhcCeEEEECc-CHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEEE
Confidence            456789999986 99999999999999987777776533222222110                    00 012256677


Q ss_pred             EccCCChhhHHHHhcCccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEec
Q 023689           65 EADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS  130 (278)
Q Consensus        65 ~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~S  130 (278)
                      ...++ .+.+.++++++|+||.+.-...               ...-..+.+.|++.++. +|+.+
T Consensus       119 ~~~i~-~~n~~~~l~~~DvVid~~D~~~---------------~~~r~~l~~~c~~~~iP-~i~~g  167 (679)
T PRK14851        119 PAGIN-ADNMDAFLDGVDVVLDGLDFFQ---------------FEIRRTLFNMAREKGIP-VITAG  167 (679)
T ss_pred             ecCCC-hHHHHHHHhCCCEEEECCCCCc---------------HHHHHHHHHHHHHCCCC-EEEee
Confidence            77775 4567888999999996631100               11122466778888754 55543

>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional

Probab=96.67  E-value=0.013  Score=49.56  Aligned_cols=95  Identities=20%  Similarity=0.219  Sum_probs=53.6

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCe---EEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTS---INATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~---v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      ++|-|.||||++|+.+++.|.++..-.   +..+.........+ .+.+  . .+.+...   |++    .++++|++|.
T Consensus         6 ~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~saGk~~-~~~~--~-~l~v~~~---~~~----~~~~~Divf~   74 (347)
T PRK06728          6 YHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSAGKTV-QFKG--R-EIIIQEA---KIN----SFEGVDIAFF   74 (347)
T ss_pred             CEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccCCCCe-eeCC--c-ceEEEeC---CHH----HhcCCCEEEE
Confidence            689999999999999999998643324   44444333222222 2211  1 2222222   222    2367999997


Q ss_pred             ecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceee
Q 023689           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISA  134 (278)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~  134 (278)
                      +++...                  ...+...+.+.| ..+|=.||..-
T Consensus        75 a~~~~~------------------s~~~~~~~~~~G-~~VID~Ss~fR  103 (347)
T PRK06728         75 SAGGEV------------------SRQFVNQAVSSG-AIVIDNTSEYR  103 (347)
T ss_pred             CCChHH------------------HHHHHHHHHHCC-CEEEECchhhc
Confidence            764311                  334555555566 35776676443

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=96.64  E-value=0.003  Score=58.14  Aligned_cols=70  Identities=16%  Similarity=0.220  Sum_probs=58.2

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHH-hcCccEEEEe
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFHV   87 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~-~~~~d~vi~~   87 (278)
                      ++|+|.|. |-+|+.+++.|.++|. .+++++.+++..+...+.      +...+.+|.+|++.++++ ++++|.++-+
T Consensus       401 ~~vII~G~-Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~------g~~v~~GDat~~~~L~~agi~~A~~vvv~  471 (621)
T PRK03562        401 PRVIIAGF-GRFGQIVGRLLLSSGV-KMTVLDHDPDHIETLRKF------GMKVFYGDATRMDLLESAGAAKAEVLINA  471 (621)
T ss_pred             CcEEEEec-ChHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhc------CCeEEEEeCCCHHHHHhcCCCcCCEEEEE
Confidence            57999987 9999999999999999 888898888766655442      678999999999988764 6688888865

>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit

Probab=96.64  E-value=0.051  Score=44.87  Aligned_cols=88  Identities=19%  Similarity=0.243  Sum_probs=60.9

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcC--ccEEEEe
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG--CKGVFHV   87 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~--~d~vi~~   87 (278)
                      -+|+|-|.||.+|+.+.+.|...|. .+++.+....-.+.+               ..+.-..++.++-+.  +|.++-+
T Consensus         7 ~~~~~~g~~~~~~~~~~~~~~~~g~-~~v~~V~p~~~~~~v---------------~G~~~y~sv~dlp~~~~~Dlavi~   70 (286)
T TIGR01019         7 TKVIVQGITGSQGSFHTEQMLAYGT-NIVGGVTPGKGGTTV---------------LGLPVFDSVKEAVEETGANASVIF   70 (286)
T ss_pred             CcEEEecCCcHHHHHHHHHHHhCCC-CEEEEECCCCCccee---------------cCeeccCCHHHHhhccCCCEEEEe
Confidence            4899999999999999999999998 455544433112211               233445566666665  7988876


Q ss_pred             cccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      ...          .        .+...++.|.+.|++.+|.+|+
T Consensus        71 vpa----------~--------~v~~~l~e~~~~Gvk~avIis~   96 (286)
T TIGR01019        71 VPA----------P--------FAADAIFEAIDAGIELIVCITE   96 (286)
T ss_pred             cCH----------H--------HHHHHHHHHHHCCCCEEEEECC
Confidence            432          1        1445777888899999988886

ATP citrate lyases appear to form an outgroup.

>PRK08040 putative semialdehyde dehydrogenase; Provisional

Probab=96.63  E-value=0.011  Score=49.95  Aligned_cols=95  Identities=21%  Similarity=0.209  Sum_probs=54.7

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHC--CCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDN--NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~--g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      .++|.|.||||++|+.|++.|.++  ...++..+..+......+. +.+.   .+.+-  |+   +.  ..++++|++|.
T Consensus         4 ~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~saG~~~~-~~~~---~~~v~--~~---~~--~~~~~~Dvvf~   72 (336)
T PRK08040          4 GWNIALLGATGAVGEALLELLAERQFPVGELYALASEESAGETLR-FGGK---SVTVQ--DA---AE--FDWSQAQLAFF   72 (336)
T ss_pred             CCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccCcCCceEE-ECCc---ceEEE--eC---ch--hhccCCCEEEE
Confidence            368999999999999999999884  4446666654433222222 2110   12221  22   21  22467899987


Q ss_pred             ecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEeccee
Q 023689           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSIS  133 (278)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~  133 (278)
                      +++...                  ...+...+.+.|+ ++|=.|+..
T Consensus        73 a~p~~~------------------s~~~~~~~~~~g~-~VIDlS~~f  100 (336)
T PRK08040         73 VAGREA------------------SAAYAEEATNAGC-LVIDSSGLF  100 (336)
T ss_pred             CCCHHH------------------HHHHHHHHHHCCC-EEEECChHh
Confidence            753211                  3345555555664 577777644

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=96.62  E-value=0.0096  Score=51.83  Aligned_cols=71  Identities=15%  Similarity=0.109  Sum_probs=52.5

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc--CccEEE
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVF   85 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vi   85 (278)
                      +.|+|+|+|+ |..|+.++..+.+.|+ .|+.++.++......  .      .-.++..|..|.+.+.++++  ++|.|+
T Consensus        11 ~~~~ilIiG~-g~~~~~~~~a~~~~G~-~v~~~~~~~~~~~~~--~------ad~~~~~~~~d~~~l~~~~~~~~id~vi   80 (395)
T PRK09288         11 SATRVMLLGS-GELGKEVAIEAQRLGV-EVIAVDRYANAPAMQ--V------AHRSHVIDMLDGDALRAVIEREKPDYIV   80 (395)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCC-EEEEEeCCCCCchHH--h------hhheEECCCCCHHHHHHHHHHhCCCEEE
Confidence            3479999987 7899999999999999 788777765432111  0      11256688889999988888  789888


Q ss_pred             Eec
Q 023689           86 HVA   88 (278)
Q Consensus        86 ~~a   88 (278)
                      ...
T Consensus        81 ~~~   83 (395)
T PRK09288         81 PEI   83 (395)
T ss_pred             Eee
Confidence            643

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=96.62  E-value=0.011  Score=44.15  Aligned_cols=59  Identities=15%  Similarity=0.168  Sum_probs=42.9

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      ++.+|+++|.|.+..+|+.|+..|.++|. .|.......                           ..+++.++.+|+||
T Consensus        33 ~l~Gk~v~VvGrs~~VG~Pla~lL~~~~a-tVt~~h~~T---------------------------~~l~~~~~~ADIVV   84 (160)
T PF02882_consen   33 DLEGKKVVVVGRSNIVGKPLAMLLLNKGA-TVTICHSKT---------------------------KNLQEITRRADIVV   84 (160)
T ss_dssp             STTT-EEEEE-TTTTTHHHHHHHHHHTT--EEEEE-TTS---------------------------SSHHHHHTTSSEEE
T ss_pred             CCCCCEEEEECCcCCCChHHHHHHHhCCC-eEEeccCCC---------------------------CcccceeeeccEEe
Confidence            46789999999999999999999999998 665442211                           34677888999999


Q ss_pred             EecccCC
Q 023689           86 HVASPCT   92 (278)
Q Consensus        86 ~~a~~~~   92 (278)
                      -.+|...
T Consensus        85 sa~G~~~   91 (160)
T PF02882_consen   85 SAVGKPN   91 (160)
T ss_dssp             E-SSSTT
T ss_pred             eeecccc
Confidence            8887644

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PRK14852 hypothetical protein; Provisional

Probab=96.61  E-value=0.024  Score=54.03  Aligned_cols=109  Identities=14%  Similarity=0.155  Sum_probs=68.5

Q ss_pred             cccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccC--------------------CC-CCCCceEE
Q 023689            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL--------------------PG-AGDANLRV   63 (278)
Q Consensus         5 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~--------------------~~-~~~~~v~~   63 (278)
                      .+++..+|+|.|. |++|+.++..|...|.-.+++.+.+.-...++...                    .. ....+++.
T Consensus       328 ~kL~~srVlVvGl-GGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~v~I~~  406 (989)
T PRK14852        328 RRLLRSRVAIAGL-GGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPFLDIRS  406 (989)
T ss_pred             HHHhcCcEEEECC-cHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCCCeEEE
Confidence            3556679999986 99999999999999987777776643332222210                    00 01124555


Q ss_pred             EEccCCChhhHHHHhcCccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           64 FEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        64 ~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      +...+ +.+.+.++++++|+||.+.-...               +..-..+.+.|.+.++. +|+.++
T Consensus       407 ~~~~I-~~en~~~fl~~~DiVVDa~D~~~---------------~~~rr~l~~~c~~~~IP-~I~ag~  457 (989)
T PRK14852        407 FPEGV-AAETIDAFLKDVDLLVDGIDFFA---------------LDIRRRLFNRALELGIP-VITAGP  457 (989)
T ss_pred             EecCC-CHHHHHHHhhCCCEEEECCCCcc---------------HHHHHHHHHHHHHcCCC-EEEeec
Confidence            55555 45678888999999997631100               11124566778777754 666543

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=96.60  E-value=0.0022  Score=51.01  Aligned_cols=38  Identities=18%  Similarity=0.092  Sum_probs=32.9

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCc
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS   48 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~   48 (278)
                      |+|.|+||+|.+|+.+++.|.+.|+ +|.+..|+++..+
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~~G~-~V~v~~r~~~~~~   38 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAKAGN-KIIIGSRDLEKAE   38 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCC-EEEEEEcCHHHHH
Confidence            4799999999999999999999998 8888888765543

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=96.59  E-value=0.0045  Score=52.34  Aligned_cols=98  Identities=21%  Similarity=0.146  Sum_probs=59.8

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCCh---hhHHHHhc--CccE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS---GAVSRAVE--GCKG   83 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~---~~~~~~~~--~~d~   83 (278)
                      +.+|||+||+|.+|...++.+...|+ .+++.+.+.++.+.++++.      ...+ .|..+.   +.+.+...  ++|+
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~-~~v~~~~s~~k~~~~~~lG------Ad~v-i~y~~~~~~~~v~~~t~g~gvDv  214 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGA-TVVAVVSSSEKLELLKELG------ADHV-INYREEDFVEQVRELTGGKGVDV  214 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCC-cEEEEecCHHHHHHHHhcC------CCEE-EcCCcccHHHHHHHHcCCCCceE
Confidence            68999999999999999999999997 5555555554444444432      1111 223332   23444443  5899


Q ss_pred             EEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceee
Q 023689           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISA  134 (278)
Q Consensus        84 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~  134 (278)
                      |+...|...                  ....+++++..  ++++.+...+.
T Consensus       215 v~D~vG~~~------------------~~~~l~~l~~~--G~lv~ig~~~g  245 (326)
T COG0604         215 VLDTVGGDT------------------FAASLAALAPG--GRLVSIGALSG  245 (326)
T ss_pred             EEECCCHHH------------------HHHHHHHhccC--CEEEEEecCCC
Confidence            998865411                  11234444444  57888876553

>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=96.58  E-value=0.019  Score=47.90  Aligned_cols=25  Identities=32%  Similarity=0.493  Sum_probs=22.5

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCC
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNN   33 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g   33 (278)
                      +++|-|.||||.+|+.+++.|.++.
T Consensus         1 ~~~VavvGATG~VG~~~~~~L~e~~   25 (334)
T COG0136           1 KLNVAVLGATGAVGQVLLELLEERH   25 (334)
T ss_pred             CcEEEEEeccchHHHHHHHHHHhcC
Confidence            4689999999999999999999854

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.57  E-value=0.0037  Score=52.74  Aligned_cols=73  Identities=23%  Similarity=0.175  Sum_probs=48.0

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCC-hhhHHHHhcCccEEEEe
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD-SGAVSRAVEGCKGVFHV   87 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d-~~~~~~~~~~~d~vi~~   87 (278)
                      +.++||+||+|.+|..+++.+...|. .|+++.++++..+.+..+.     ...++  |..+ .+.+.+. .++|+++++
T Consensus       163 ~~~vlI~ga~g~vG~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~-----~~~~~--~~~~~~~~~~~~-~~~d~v~~~  233 (332)
T cd08259         163 GDTVLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSPEKLKILKELG-----ADYVI--DGSKFSEDVKKL-GGADVVIEL  233 (332)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHcC-----CcEEE--ecHHHHHHHHhc-cCCCEEEEC
Confidence            56899999999999999999999999 8888887665444433221     11111  2211 1222222 368999998


Q ss_pred             ccc
Q 023689           88 ASP   90 (278)
Q Consensus        88 a~~   90 (278)
                      ++.
T Consensus       234 ~g~  236 (332)
T cd08259         234 VGS  236 (332)
T ss_pred             CCh
Confidence            764

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=96.55  E-value=0.003  Score=56.98  Aligned_cols=42  Identities=17%  Similarity=0.071  Sum_probs=35.1

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccc
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL   50 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~   50 (278)
                      +++|+++|+|+ |++|+.++..|.+.|+ +|++..|+.++.+.+
T Consensus       377 ~~~k~vlIlGa-GGagrAia~~L~~~G~-~V~i~nR~~e~a~~l  418 (529)
T PLN02520        377 LAGKLFVVIGA-GGAGKALAYGAKEKGA-RVVIANRTYERAKEL  418 (529)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHH
Confidence            45689999999 8999999999999999 888888876554444

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=96.52  E-value=0.0099  Score=46.97  Aligned_cols=39  Identities=26%  Similarity=0.507  Sum_probs=31.7

Q ss_pred             cccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCC
Q 023689            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG   44 (278)
Q Consensus         5 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   44 (278)
                      ..++.-+|+|.|. |++|++.++.|.+.|.-.+.+++-+.
T Consensus        26 ekl~~~~V~VvGi-GGVGSw~veALaRsGig~itlID~D~   64 (263)
T COG1179          26 EKLKQAHVCVVGI-GGVGSWAVEALARSGIGRITLIDMDD   64 (263)
T ss_pred             HHHhhCcEEEEec-CchhHHHHHHHHHcCCCeEEEEeccc
Confidence            3445568999998 99999999999999987777776543

>PRK06849 hypothetical protein; Provisional

Probab=96.51  E-value=0.0083  Score=52.14  Aligned_cols=37  Identities=16%  Similarity=0.077  Sum_probs=32.5

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCC
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS   45 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~   45 (278)
                      ++|+|||||++..+|..+++.|.+.|+ +|++.+.++.
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~-~Vi~~d~~~~   39 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGH-TVILADSLKY   39 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCch
Confidence            358999999999999999999999999 8888877653

>PRK07411 hypothetical protein; Validated

Probab=96.51  E-value=0.02  Score=49.65  Aligned_cols=81  Identities=17%  Similarity=0.131  Sum_probs=53.9

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccC--------------------CC-CCCCceEEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL--------------------PG-AGDANLRVF   64 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~--------------------~~-~~~~~v~~~   64 (278)
                      +++..+|+|.|+ |++|.++++.|...|...+++++.+.-....+...                    .. ....+++.+
T Consensus        35 ~L~~~~VlivG~-GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~~  113 (390)
T PRK07411         35 RLKAASVLCIGT-GGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDLY  113 (390)
T ss_pred             HHhcCcEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEEE
Confidence            445679999988 89999999999999987787777644333222211                    00 011245555


Q ss_pred             EccCCChhhHHHHhcCccEEEEec
Q 023689           65 EADVLDSGAVSRAVEGCKGVFHVA   88 (278)
Q Consensus        65 ~~Dl~d~~~~~~~~~~~d~vi~~a   88 (278)
                      ...++. +...+.++++|+||.+.
T Consensus       114 ~~~~~~-~~~~~~~~~~D~Vvd~~  136 (390)
T PRK07411        114 ETRLSS-ENALDILAPYDVVVDGT  136 (390)
T ss_pred             ecccCH-HhHHHHHhCCCEEEECC
Confidence            555554 44667788899998774

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=96.50  E-value=0.003  Score=50.37  Aligned_cols=75  Identities=21%  Similarity=0.302  Sum_probs=49.9

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCC--eEEEEecCC----CCCccc----ccCCCCCCCceEEEEccCCChhhHH
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYT--SINATVFPG----SDSSHL----FALPGAGDANLRVFEADVLDSGAVS   75 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~--~v~~~~r~~----~~~~~~----~~~~~~~~~~v~~~~~Dl~d~~~~~   75 (278)
                      ++++++++|.|+ |..|+.++..|.+.|..  +++..+|+.    +..+.+    ..+....  +.    .+. + .++.
T Consensus        22 ~l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~--~~----~~~-~-~~l~   92 (226)
T cd05311          22 KIEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKET--NP----EKT-G-GTLK   92 (226)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHh--cc----Ccc-c-CCHH
Confidence            466789999999 99999999999999986  799998873    322111    1110000  00    011 1 2455


Q ss_pred             HHhcCccEEEEecc
Q 023689           76 RAVEGCKGVFHVAS   89 (278)
Q Consensus        76 ~~~~~~d~vi~~a~   89 (278)
                      +.++++|+||++.+
T Consensus        93 ~~l~~~dvlIgaT~  106 (226)
T cd05311          93 EALKGADVFIGVSR  106 (226)
T ss_pred             HHHhcCCEEEeCCC
Confidence            67788999999876

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=96.50  E-value=0.0078  Score=52.41  Aligned_cols=67  Identities=16%  Similarity=0.069  Sum_probs=47.9

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      +.+++|+|+|. |.||+.+++.|...|. .|++..+++.........      +..     +.   .+.++++++|+||.
T Consensus       210 l~Gk~VlViG~-G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~------G~~-----v~---~l~eal~~aDVVI~  273 (425)
T PRK05476        210 IAGKVVVVAGY-GDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMD------GFR-----VM---TMEEAAELGDIFVT  273 (425)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhc------CCE-----ec---CHHHHHhCCCEEEE
Confidence            46899999997 8999999999999999 888888776543221111      221     11   24567789999998


Q ss_pred             ecc
Q 023689           87 VAS   89 (278)
Q Consensus        87 ~a~   89 (278)
                      +.|
T Consensus       274 aTG  276 (425)
T PRK05476        274 ATG  276 (425)
T ss_pred             CCC
Confidence            653

>COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]

Probab=96.48  E-value=0.014  Score=49.18  Aligned_cols=68  Identities=16%  Similarity=0.134  Sum_probs=52.0

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      ||+|-|.|| |.+|+-++..-...|+ .|+.++-+++.....  +      .-..+..+.+|++.+.++++.+|+|-.
T Consensus         1 ~~tvgIlGG-GQLgrMm~~aa~~lG~-~v~vLdp~~~~PA~~--v------a~~~i~~~~dD~~al~ela~~~DViT~   68 (375)
T COG0026           1 MKTVGILGG-GQLGRMMALAAARLGI-KVIVLDPDADAPAAQ--V------ADRVIVAAYDDPEALRELAAKCDVITY   68 (375)
T ss_pred             CCeEEEEcC-cHHHHHHHHHHHhcCC-EEEEecCCCCCchhh--c------ccceeecCCCCHHHHHHHHhhCCEEEE
Confidence            578999998 9999999999999999 887776544322111  1      224666777899999999999998853

>PLN02948 phosphoribosylaminoimidazole carboxylase

Probab=96.46  E-value=0.017  Score=52.76  Aligned_cols=73  Identities=16%  Similarity=0.116  Sum_probs=54.6

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccE
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKG   83 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~   83 (278)
                      |..+.+|+|+|.|+ |.+|+.+++.+.+.|+ +|++++.++... .. .+      .-..+.+|..|.+.+.++.+++|+
T Consensus        17 ~~~~~~k~IgIIGg-Gqlg~mla~aA~~lG~-~Vi~ld~~~~ap-a~-~~------AD~~~v~~~~D~~~l~~~a~~~dv   86 (577)
T PLN02948         17 VHGVSETVVGVLGG-GQLGRMLCQAASQMGI-KVKVLDPLEDCP-AS-SV------AARHVVGSFDDRAAVREFAKRCDV   86 (577)
T ss_pred             ccCCCCCEEEEECC-CHHHHHHHHHHHHCCC-EEEEEeCCCCCc-hh-hh------CceeeeCCCCCHHHHHHHHHHCCE
Confidence            44566789999998 7999999999999999 888887655321 11 11      112455888999999998888888


Q ss_pred             EEE
Q 023689           84 VFH   86 (278)
Q Consensus        84 vi~   86 (278)
                      |..
T Consensus        87 It~   89 (577)
T PLN02948         87 LTV   89 (577)
T ss_pred             EEE
Confidence            744

>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt

Probab=96.45  E-value=0.056  Score=43.77  Aligned_cols=95  Identities=19%  Similarity=0.256  Sum_probs=61.8

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc--CccEEEEe
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFHV   87 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vi~~   87 (278)
                      |+|||.|||+ =|+.|++.|.+.|+ .++.+.-+ ........    ....+..+.+-+.|.+.+.+.++  +++.||..
T Consensus         1 m~ILvlgGTt-E~r~la~~L~~~g~-v~~sv~t~-~g~~~~~~----~~~~~~v~~G~lg~~~~l~~~l~~~~i~~vIDA   73 (249)
T PF02571_consen    1 MKILVLGGTT-EGRKLAERLAEAGY-VIVSVATS-YGGELLKP----ELPGLEVRVGRLGDEEGLAEFLRENGIDAVIDA   73 (249)
T ss_pred             CEEEEEechH-HHHHHHHHHHhcCC-EEEEEEhh-hhHhhhcc----ccCCceEEECCCCCHHHHHHHHHhCCCcEEEEC
Confidence            6899999976 69999999999997 33322221 11111111    00156677788889999999986  79999998


Q ss_pred             cccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEE
Q 023689           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRV  126 (278)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~  126 (278)
                      ..+..               ...+.++.++|++.++..+
T Consensus        74 THPfA---------------~~is~na~~a~~~~~ipyl   97 (249)
T PF02571_consen   74 THPFA---------------AEISQNAIEACRELGIPYL   97 (249)
T ss_pred             CCchH---------------HHHHHHHHHHHhhcCcceE
Confidence            65422               1225566677766665433

Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.45  E-value=0.022  Score=48.52  Aligned_cols=74  Identities=15%  Similarity=0.130  Sum_probs=49.7

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc---CccEE
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---GCKGV   84 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---~~d~v   84 (278)
                      .+.+|+|+|+ |.+|...++.+...|.+.|++.++++++.+..+++      ++..+ .|..+. ++.+..+   ++|+|
T Consensus       169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~l------Ga~~v-i~~~~~-~~~~~~~~~g~~D~v  239 (343)
T PRK09880        169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREM------GADKL-VNPQND-DLDHYKAEKGYFDVS  239 (343)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHc------CCcEE-ecCCcc-cHHHHhccCCCCCEE
Confidence            4679999986 99999999988888985688888877666555544      22221 233322 2333332   48999


Q ss_pred             EEeccc
Q 023689           85 FHVASP   90 (278)
Q Consensus        85 i~~a~~   90 (278)
                      |.++|.
T Consensus       240 id~~G~  245 (343)
T PRK09880        240 FEVSGH  245 (343)
T ss_pred             EECCCC
Confidence            998764

>KOG2013 consensus SMT3/SUMO-activating complex, catalytic component UBA2 [Posttranslational modification, protein turnover, chaperones]

Probab=96.44  E-value=0.01  Score=51.27  Aligned_cols=77  Identities=26%  Similarity=0.138  Sum_probs=54.2

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhh------HHHHhcCcc
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGA------VSRAVEGCK   82 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~------~~~~~~~~d   82 (278)
                      +-+|||.|| |+||.+|.+-|.-.|.++|.+++.+.-+...+..       ..-|.+-|+..+.+      +.+.-.+++
T Consensus        12 ~~riLvVGa-GGIGCELLKnLal~gf~~IhiIDlDTIDlSNLNR-------QFLFrkkhVgqsKA~vA~~~v~~Fnpn~~   83 (603)
T KOG2013|consen   12 SGRILVVGA-GGIGCELLKNLALTGFEEIHIIDLDTIDLSNLNR-------QFLFRKKHVGQSKATVAAKAVKQFNPNIK   83 (603)
T ss_pred             cCeEEEEec-CcccHHHHHHHHHhcCCeeEEEeccceeccchhh-------hheeehhhcCchHHHHHHHHHHHhCCCCc
Confidence            458999998 9999999999999999889888876655444432       34455566765532      222233678


Q ss_pred             EEEEecccCCC
Q 023689           83 GVFHVASPCTL   93 (278)
Q Consensus        83 ~vi~~a~~~~~   93 (278)
                      ++.+.|.+...
T Consensus        84 l~~yhanI~e~   94 (603)
T KOG2013|consen   84 LVPYHANIKEP   94 (603)
T ss_pred             eEeccccccCc
Confidence            88888776443

>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]

Probab=96.44  E-value=0.05  Score=43.41  Aligned_cols=96  Identities=16%  Similarity=0.140  Sum_probs=61.1

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc--CccEEEE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFH   86 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vi~   86 (278)
                      +++|||.|||+ =++.|+++|...+. .++..+-.....+.....       ...+.+=..+.+.+.+.++  ++|.||.
T Consensus         2 ~~~ilvlGGT~-Dar~la~~L~~~~~-~~~~ss~t~~g~~l~~~~-------~~~~~~G~l~~e~l~~~l~e~~i~llID   72 (257)
T COG2099           2 MMRILLLGGTS-DARALAKKLAAAPV-DIILSSLTGYGAKLAEQI-------GPVRVGGFLGAEGLAAFLREEGIDLLID   72 (257)
T ss_pred             CceEEEEeccH-HHHHHHHHhhccCc-cEEEEEcccccccchhcc-------CCeeecCcCCHHHHHHHHHHcCCCEEEE
Confidence            57899999986 58999999999885 444444333222222221       1133355567788888886  6899998


Q ss_pred             ecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEE
Q 023689           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVV  128 (278)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~  128 (278)
                      ...+..               ...+.|.+++|++.|+..+-|
T Consensus        73 ATHPyA---------------a~iS~Na~~aake~gipy~r~   99 (257)
T COG2099          73 ATHPYA---------------ARISQNAARAAKETGIPYLRL   99 (257)
T ss_pred             CCChHH---------------HHHHHHHHHHHHHhCCcEEEE
Confidence            754321               233667777777777654444

>cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively

Probab=96.43  E-value=0.039  Score=45.58  Aligned_cols=32  Identities=22%  Similarity=0.223  Sum_probs=27.9

Q ss_pred             eEEEeCcchhhHHHHHHHHHHCCCCeEEEEecC
Q 023689           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFP   43 (278)
Q Consensus        11 ~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~   43 (278)
                      ||||.|+ |.+|.++++.|...|...+++++.+
T Consensus         1 kVLIvGa-GGLGs~vA~~La~aGVg~ItlvD~D   32 (307)
T cd01486           1 KCLLLGA-GTLGCNVARNLLGWGVRHITFVDSG   32 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCCeEEEECCC
Confidence            5899988 8999999999999998778777653

This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole.

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=96.40  E-value=0.0077  Score=53.68  Aligned_cols=103  Identities=15%  Similarity=0.071  Sum_probs=67.0

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCCh-------------h--
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS-------------G--   72 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~-------------~--   72 (278)
                      .+.+|+|+|+ |-+|...+..+...|. +|++.+++++..+..+.+      +.+++..|..+.             +  
T Consensus       164 pg~kVlViGa-G~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aesl------GA~~v~i~~~e~~~~~~gya~~~s~~~~  235 (509)
T PRK09424        164 PPAKVLVIGA-GVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESM------GAEFLELDFEEEGGSGDGYAKVMSEEFI  235 (509)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc------CCeEEEeccccccccccchhhhcchhHH
Confidence            3679999998 9999999999999999 899999988776666554      445444433221             1  


Q ss_pred             -----hHHHHhcCccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           73 -----AVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        73 -----~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                           .+.+..+++|+||.+++......    + ..+      +...++.++..  +.++.++.
T Consensus       236 ~~~~~~~~~~~~gaDVVIetag~pg~~a----P-~li------t~~~v~~mkpG--gvIVdvg~  286 (509)
T PRK09424        236 KAEMALFAEQAKEVDIIITTALIPGKPA----P-KLI------TAEMVASMKPG--SVIVDLAA  286 (509)
T ss_pred             HHHHHHHHhccCCCCEEEECCCCCcccC----c-chH------HHHHHHhcCCC--CEEEEEcc
Confidence                 11222357999999998643211    1 111      24456666544  35777764

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=96.39  E-value=0.01  Score=51.48  Aligned_cols=67  Identities=13%  Similarity=0.067  Sum_probs=48.5

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      +.+++|+|.|+ |.||+.+++.+...|. .|++..+++.+.......      ++..+     +   +.++++++|+||.
T Consensus       200 l~GktVvViG~-G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~------G~~~~-----~---~~e~v~~aDVVI~  263 (413)
T cd00401         200 IAGKVAVVAGY-GDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAME------GYEVM-----T---MEEAVKEGDIFVT  263 (413)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhc------CCEEc-----c---HHHHHcCCCEEEE
Confidence            45889999988 8999999999999999 788887776554333322      22221     1   2356778999998


Q ss_pred             ecc
Q 023689           87 VAS   89 (278)
Q Consensus        87 ~a~   89 (278)
                      ++|
T Consensus       264 atG  266 (413)
T cd00401         264 TTG  266 (413)
T ss_pred             CCC
Confidence            765

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated

Probab=96.39  E-value=0.0044  Score=52.38  Aligned_cols=77  Identities=14%  Similarity=0.145  Sum_probs=47.2

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCC--CceEEEEccCCChhhHHHHhcCccEEEE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGD--ANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~--~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      ||+|.|.|+ |.+|..++..|.+.|+ +|.+..|+++..+.+........  ..... ...+.-..+..+.++++|+||-
T Consensus         1 mmkI~iiG~-G~mG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~D~vi~   77 (325)
T PRK00094          1 MMKIAVLGA-GSWGTALAIVLARNGH-DVTLWARDPEQAAEINADRENPRYLPGIKL-PDNLRATTDLAEALADADLILV   77 (325)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHcCcccccCCCCcC-CCCeEEeCCHHHHHhCCCEEEE
Confidence            468999987 9999999999999999 89989887654433322100000  00000 0011112345556778899887


Q ss_pred             ec
Q 023689           87 VA   88 (278)
Q Consensus        87 ~a   88 (278)
                      +.
T Consensus        78 ~v   79 (325)
T PRK00094         78 AV   79 (325)
T ss_pred             eC
Confidence            64

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=96.37  E-value=0.017  Score=48.53  Aligned_cols=67  Identities=13%  Similarity=0.252  Sum_probs=49.8

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      .+.+|++.|.|- |-||+.+++.|..-|+ +|++.++..+...           .+..+    ...+++.++++++|+|+
T Consensus       133 ~l~g~tvgIvG~-G~IG~~vA~~l~afG~-~V~~~~~~~~~~~-----------~~~~~----~~~~~l~e~l~~aDvvv  195 (312)
T PRK15469        133 HREDFTIGILGA-GVLGSKVAQSLQTWGF-PLRCWSRSRKSWP-----------GVQSF----AGREELSAFLSQTRVLI  195 (312)
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCC-EEEEEeCCCCCCC-----------Cceee----cccccHHHHHhcCCEEE
Confidence            456899999976 9999999999999999 8988887543211           11111    13457899999999998


Q ss_pred             Eecc
Q 023689           86 HVAS   89 (278)
Q Consensus        86 ~~a~   89 (278)
                      .+..
T Consensus       196 ~~lP  199 (312)
T PRK15469        196 NLLP  199 (312)
T ss_pred             ECCC
Confidence            7753

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.37  E-value=0.02  Score=41.95  Aligned_cols=58  Identities=16%  Similarity=0.143  Sum_probs=46.3

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      ++++|+|+|.|.+.-+|+.|+..|.++|. .|....++.                           .++++.++.+|+|+
T Consensus        25 ~~~gk~v~VvGrs~~vG~pla~lL~~~ga-tV~~~~~~t---------------------------~~l~~~v~~ADIVv   76 (140)
T cd05212          25 RLDGKKVLVVGRSGIVGAPLQCLLQRDGA-TVYSCDWKT---------------------------IQLQSKVHDADVVV   76 (140)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeCCCC---------------------------cCHHHHHhhCCEEE
Confidence            46789999999999999999999999998 666553321                           14667888999999


Q ss_pred             EecccC
Q 023689           86 HVASPC   91 (278)
Q Consensus        86 ~~a~~~   91 (278)
                      -..+..
T Consensus        77 sAtg~~   82 (140)
T cd05212          77 VGSPKP   82 (140)
T ss_pred             EecCCC
Confidence            887654

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PRK07877 hypothetical protein; Provisional

Probab=96.36  E-value=0.029  Score=52.27  Aligned_cols=105  Identities=19%  Similarity=0.223  Sum_probs=68.7

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCC-CeEEEEecCCCCCcccccCC-------------------C-CCCCceEEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFALP-------------------G-AGDANLRVF   64 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~~~~~-------------------~-~~~~~v~~~   64 (278)
                      +++..+|+|.|. | +|+.++..|...|. -.+++.+.+.-...++....                   . ....+++.+
T Consensus       104 ~L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~  181 (722)
T PRK07877        104 RLGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVF  181 (722)
T ss_pred             HHhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEE
Confidence            455679999999 7 99999999999994 57777766443332222210                   0 012266777


Q ss_pred             EccCCChhhHHHHhcCccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           65 EADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        65 ~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      ...++ .+.+.++++++|+|+.+.         ++.        ..-..+-++|.++++ .+|+-++
T Consensus       182 ~~~i~-~~n~~~~l~~~DlVvD~~---------D~~--------~~R~~ln~~a~~~~i-P~i~~~~  229 (722)
T PRK07877        182 TDGLT-EDNVDAFLDGLDVVVEEC---------DSL--------DVKVLLREAARARRI-PVLMATS  229 (722)
T ss_pred             eccCC-HHHHHHHhcCCCEEEECC---------CCH--------HHHHHHHHHHHHcCC-CEEEEcC
Confidence            77775 577888999999999873         211        112235567788875 4776554

>TIGR01771 L-LDH-NAD L-lactate dehydrogenase

Probab=96.35  E-value=0.037  Score=46.22  Aligned_cols=162  Identities=16%  Similarity=0.150  Sum_probs=92.7

Q ss_pred             EeCcchhhHHHHHHHHHHCCC-CeEEEEecCCCCCccc-ccCCCC---CCCceEEEEccCCChhhHHHHhcCccEEEEec
Q 023689           14 VTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHL-FALPGA---GDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (278)
Q Consensus        14 ItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~-~~~~~~---~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a   88 (278)
                      |+|+ |.||..++..|...+. .++.+++.+.+...-. ..+...   ...++++. .  .+    .+.++++|+||-.|
T Consensus         1 iIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~-~--~~----~~~~~daDivVita   72 (299)
T TIGR01771         1 IIGA-GNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIR-S--GD----YSDCKDADLVVITA   72 (299)
T ss_pred             CCCc-CHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEe-c--CC----HHHHCCCCEEEECC
Confidence            4666 9999999999988875 5688888765432211 111100   00022222 1  12    35789999999999


Q ss_pred             ccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCC--CCccccCCCCCchhhhhccCchhhh
Q 023689           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGW--KGKVFDETSWTDLEYCKSRKKWYPV  166 (278)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~--~~~~~~E~~~~~~~~~~~~~~~y~~  166 (278)
                      |.....  ..+....++.|+...+.+.+.+++++...++.+-|      +|..  ..........       ++....|.
T Consensus        73 g~~rk~--g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvs------NP~d~~t~~~~~~sg~-------p~~~viG~  137 (299)
T TIGR01771        73 GAPQKP--GETRLELVGRNVRIMKSIVPEVVKSGFDGIFLVAT------NPVDILTYVAWKLSGF-------PKNRVIGS  137 (299)
T ss_pred             CCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeC------CHHHHHHHHHHHHhCC-------CHHHEEec
Confidence            875432  24567899999999999999998887554444433      1110  0000000000       00012333


Q ss_pred             -HHHHHHHHHHHHHHhcCCceEEEecceeeCCCC
Q 023689          167 -SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLM  199 (278)
Q Consensus       167 -sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~  199 (278)
                       +....-++-...+++.+++...++. .|+|++.
T Consensus       138 gt~LDs~R~~~~la~~l~v~~~~V~~-~v~GeHG  170 (299)
T TIGR01771       138 GTVLDTARLRYLLAEKLGVDPQSVHA-YIIGEHG  170 (299)
T ss_pred             cchHHHHHHHHHHHHHhCcCcCeEEE-EEEecCC
Confidence             2222334444445567888888884 5888864

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.35  E-value=0.007  Score=51.09  Aligned_cols=74  Identities=19%  Similarity=0.213  Sum_probs=49.8

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChh---hHHHHh-cCccE
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSG---AVSRAV-EGCKG   83 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~---~~~~~~-~~~d~   83 (278)
                      .+.++||+||+|.+|..+++.+...|. .|+++.+++++.+.++.+      ++..+ .|..+.+   .+.+.. .++|+
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~-~vi~~~~s~~~~~~l~~~------Ga~~v-i~~~~~~~~~~v~~~~~~gvd~  214 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGC-KVIGCAGSDDKVAWLKEL------GFDAV-FNYKTVSLEEALKEAAPDGIDC  214 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHc------CCCEE-EeCCCccHHHHHHHHCCCCcEE
Confidence            357999999999999999999988999 788888877665555443      22211 2222222   233322 35899


Q ss_pred             EEEecc
Q 023689           84 VFHVAS   89 (278)
Q Consensus        84 vi~~a~   89 (278)
                      |+++.+
T Consensus       215 vld~~g  220 (329)
T cd08294         215 YFDNVG  220 (329)
T ss_pred             EEECCC
Confidence            998765

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=96.34  E-value=0.026  Score=43.41  Aligned_cols=79  Identities=13%  Similarity=0.138  Sum_probs=50.9

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCC-hhhHHHHhcCccEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD-SGAVSRAVEGCKGV   84 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d-~~~~~~~~~~~d~v   84 (278)
                      ++++|+++|.|.|.-+|+.|+..|+++|+ .|+....+....   +.  ...  ....-.....| +..+.+.++.+|+|
T Consensus        59 ~l~GK~vvVIGrS~iVGkPla~lL~~~~A-tVti~~~~~~~~---~~--~~~--~~~hs~t~~~~~~~~l~~~~~~ADIV  130 (197)
T cd01079          59 RLYGKTITIINRSEVVGRPLAALLANDGA-RVYSVDINGIQV---FT--RGE--SIRHEKHHVTDEEAMTLDCLSQSDVV  130 (197)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHHCCC-EEEEEecCcccc---cc--ccc--ccccccccccchhhHHHHHhhhCCEE
Confidence            57899999999999999999999999999 777664322110   00  000  00000011112 23478889999999


Q ss_pred             EEecccCC
Q 023689           85 FHVASPCT   92 (278)
Q Consensus        85 i~~a~~~~   92 (278)
                      |-.+|...
T Consensus       131 IsAvG~~~  138 (197)
T cd01079         131 ITGVPSPN  138 (197)
T ss_pred             EEccCCCC
Confidence            98877644

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=96.33  E-value=0.0069  Score=50.70  Aligned_cols=74  Identities=18%  Similarity=0.141  Sum_probs=49.8

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhh---HHHHh--cCcc
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGA---VSRAV--EGCK   82 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~---~~~~~--~~~d   82 (278)
                      .+++++|+|++|.+|..+++.+...|. .|+++.++++..+.+..+      ++..+ .|..+.+.   +.+..  +++|
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~------g~~~~-~~~~~~~~~~~~~~~~~~~~~d  215 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVRQA------GADAV-FNYRAEDLADRILAATAGQGVD  215 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHc------CCCEE-EeCCCcCHHHHHHHHcCCCceE
Confidence            468999999999999999999999998 888888866544443322      22111 23333332   33333  2689


Q ss_pred             EEEEecc
Q 023689           83 GVFHVAS   89 (278)
Q Consensus        83 ~vi~~a~   89 (278)
                      .++++++
T Consensus       216 ~vi~~~~  222 (325)
T cd08253         216 VIIEVLA  222 (325)
T ss_pred             EEEECCc
Confidence            9999875

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism]

Probab=96.33  E-value=0.0047  Score=52.02  Aligned_cols=74  Identities=20%  Similarity=0.276  Sum_probs=58.3

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChh-hHHHHhcCccEEEEe
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSG-AVSRAVEGCKGVFHV   87 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~-~~~~~~~~~d~vi~~   87 (278)
                      +++||+.|+ ||+.+.++..|.+++..+|+...|...+.+.+.+    +. +++.+..|+.+++ .+...++..|.++-+
T Consensus         2 ~~~vlllgs-g~v~~p~~d~ls~~~dv~vtva~~~~~~~~~~~~----~~-~~~av~ldv~~~~~~L~~~v~~~D~viSL   75 (445)
T KOG0172|consen    2 KKGVLLLGS-GFVSRPVADFLSRKKDVNVTVASRTLKDAEALVK----GI-NIKAVSLDVADEELALRKEVKPLDLVISL   75 (445)
T ss_pred             CcceEEecC-ccccchHHHHHhhcCCceEEEehhhHHHHHHHhc----CC-CccceEEEccchHHHHHhhhcccceeeee
Confidence            578999987 9999999999998876577777776555544432    11 6889999999998 899899988888876


Q ss_pred             c
Q 023689           88 A   88 (278)
Q Consensus        88 a   88 (278)
                      -
T Consensus        76 l   76 (445)
T KOG0172|consen   76 L   76 (445)
T ss_pred             c
Confidence            4

>PLN02353 probable UDP-glucose 6-dehydrogenase

Probab=96.32  E-value=0.014  Score=51.75  Aligned_cols=82  Identities=15%  Similarity=0.127  Sum_probs=50.2

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCC--CCeEEEEecCCCCCcccccCCCC-CCCceEEE----Ec-cCCChhhHHHHhcC
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNN--YTSINATVFPGSDSSHLFALPGA-GDANLRVF----EA-DVLDSGAVSRAVEG   80 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g--~~~v~~~~r~~~~~~~~~~~~~~-~~~~v~~~----~~-Dl~d~~~~~~~~~~   80 (278)
                      ||+|.|.|. |++|..++-.|.+.|  + +|++++.+++..+.+..-... ...++.-+    .+ .++-..++.+++++
T Consensus         1 ~m~I~ViG~-GyvGl~~A~~lA~~g~g~-~V~gvD~~~~~v~~l~~g~~~~~e~gl~ell~~~~~~~l~~t~~~~~~i~~   78 (473)
T PLN02353          1 MVKICCIGA-GYVGGPTMAVIALKCPDI-EVVVVDISVPRIDAWNSDQLPIYEPGLDEVVKQCRGKNLFFSTDVEKHVAE   78 (473)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCC-eEEEEECCHHHHHHHHcCCCccCCCCHHHHHHHhhcCCEEEEcCHHHHHhc
Confidence            578999966 999999999999885  5 899998877665544321000 00010000    00 11111334566788


Q ss_pred             ccEEEEecccCC
Q 023689           81 CKGVFHVASPCT   92 (278)
Q Consensus        81 ~d~vi~~a~~~~   92 (278)
                      +|++|-|.+...
T Consensus        79 advi~I~V~TP~   90 (473)
T PLN02353         79 ADIVFVSVNTPT   90 (473)
T ss_pred             CCEEEEEeCCCC
Confidence            999998876433

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins

Probab=96.31  E-value=0.015  Score=48.68  Aligned_cols=110  Identities=15%  Similarity=0.120  Sum_probs=67.8

Q ss_pred             EEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccc----ccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEe
Q 023689           12 VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL----FALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (278)
Q Consensus        12 vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~----~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~   87 (278)
                      |.|+|+ |.+|..++..|...|..+|++.+++++.....    ............+ ... .|   . +.++++|+||.+
T Consensus         1 I~IIGa-G~vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~I-~~t-~d---~-~~l~dADiVIit   73 (300)
T cd01339           1 ISIIGA-GNVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPILGSDTKV-TGT-ND---Y-EDIAGSDVVVIT   73 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeEE-EEc-CC---H-HHhCCCCEEEEe
Confidence            468998 99999999999887732788888876532111    1100000001111 110 12   2 347999999999


Q ss_pred             cccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEE-EEec
Q 023689           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRV-VVTS  130 (278)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~-v~~S  130 (278)
                      ++.....  .....+.+..|+.....+++.+.+...... |.+|
T Consensus        74 ~g~p~~~--~~~r~e~~~~n~~i~~~i~~~i~~~~p~~~iIv~s  115 (300)
T cd01339          74 AGIPRKP--GMSRDDLLGTNAKIVKEVAENIKKYAPNAIVIVVT  115 (300)
T ss_pred             cCCCCCc--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            9864432  234456777899888899998888764544 4444

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=96.30  E-value=0.013  Score=51.24  Aligned_cols=79  Identities=13%  Similarity=0.161  Sum_probs=48.9

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCC-CCCceE-----EE-EccCCChhhHHHHhcCcc
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGA-GDANLR-----VF-EADVLDSGAVSRAVEGCK   82 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~v~-----~~-~~Dl~d~~~~~~~~~~~d   82 (278)
                      |+|.|.|. |++|..++..|.+.|+ +|++.+++++..+.+..-... ...++.     .+ .+.++-..+..++++++|
T Consensus         1 mkI~vIGl-G~~G~~lA~~La~~G~-~V~~~d~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~~~~~~~~~~~ad   78 (411)
T TIGR03026         1 MKIAVIGL-GYVGLPLAALLADLGH-EVTGVDIDQEKVDKLNKGKSPIYEPGLDELLAKALAAGRLRATTDYEDAIRDAD   78 (411)
T ss_pred             CEEEEECC-CchhHHHHHHHHhcCC-eEEEEECCHHHHHHhhcCCCCCCCCCHHHHHHHhhhcCCeEEECCHHHHHhhCC
Confidence            47889976 9999999999999999 899999877655443321000 000000     00 011111234566778899


Q ss_pred             EEEEeccc
Q 023689           83 GVFHVASP   90 (278)
Q Consensus        83 ~vi~~a~~   90 (278)
                      +||-+...
T Consensus        79 vvii~vpt   86 (411)
T TIGR03026        79 VIIICVPT   86 (411)
T ss_pred             EEEEEeCC
Confidence            99988654

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.29  E-value=0.0039  Score=55.49  Aligned_cols=71  Identities=11%  Similarity=0.093  Sum_probs=46.7

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      ..+|+++|+|+ |.+|+.++..|.+.|+ .|....|+.++.+.+....     +...  .+.   +.+. .+.++|+||+
T Consensus       330 ~~~k~vlIiGa-GgiG~aia~~L~~~G~-~V~i~~R~~~~~~~la~~~-----~~~~--~~~---~~~~-~l~~~DiVIn  396 (477)
T PRK09310        330 LNNQHVAIVGA-GGAAKAIATTLARAGA-ELLIFNRTKAHAEALASRC-----QGKA--FPL---ESLP-ELHRIDIIIN  396 (477)
T ss_pred             cCCCEEEEEcC-cHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh-----ccce--ech---hHhc-ccCCCCEEEE
Confidence            35689999996 8999999999999999 8888877654433332210     1011  111   1222 2467899999


Q ss_pred             eccc
Q 023689           87 VASP   90 (278)
Q Consensus        87 ~a~~   90 (278)
                      +...
T Consensus       397 atP~  400 (477)
T PRK09310        397 CLPP  400 (477)
T ss_pred             cCCC
Confidence            9754

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=96.28  E-value=0.015  Score=48.75  Aligned_cols=36  Identities=19%  Similarity=0.206  Sum_probs=31.1

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCC
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS   45 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~   45 (278)
                      +.|+|.|.|+ |.+|+.+++.|.+.|+ +|....|+..
T Consensus         3 ~~m~I~iiG~-G~~G~~lA~~l~~~G~-~V~~~~r~~~   38 (308)
T PRK14619          3 QPKTIAILGA-GAWGSTLAGLASANGH-RVRVWSRRSG   38 (308)
T ss_pred             CCCEEEEECc-cHHHHHHHHHHHHCCC-EEEEEeCCCC
Confidence            3478999977 9999999999999999 8988888653

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=96.27  E-value=0.0073  Score=50.67  Aligned_cols=70  Identities=20%  Similarity=0.204  Sum_probs=46.8

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCC-CeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      ..++|.|+| +|.+|..++..|.+.|+ ..|++.+|+++..+.....      ++..   ...  .+..+.++++|+||.
T Consensus         5 ~~~~I~IIG-~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~------g~~~---~~~--~~~~~~~~~aDvVii   72 (307)
T PRK07502          5 LFDRVALIG-IGLIGSSLARAIRRLGLAGEIVGADRSAETRARAREL------GLGD---RVT--TSAAEAVKGADLVIL   72 (307)
T ss_pred             CCcEEEEEe-eCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhC------CCCc---eec--CCHHHHhcCCCEEEE
Confidence            347899998 59999999999999884 3788888876543333221      1100   011  234556788999998


Q ss_pred             ecc
Q 023689           87 VAS   89 (278)
Q Consensus        87 ~a~   89 (278)
                      +..
T Consensus        73 avp   75 (307)
T PRK07502         73 CVP   75 (307)
T ss_pred             CCC
Confidence            864

>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]

Probab=96.26  E-value=0.0066  Score=50.51  Aligned_cols=73  Identities=18%  Similarity=0.168  Sum_probs=51.8

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEE-----ccCCChhhHHHHhcCccE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFE-----ADVLDSGAVSRAVEGCKG   83 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~-----~Dl~d~~~~~~~~~~~d~   83 (278)
                      +++|.|.|+ |--|.+|+..|.++|+ .|....|+++....+..-..    +.+++.     .++.-..++.++++++|+
T Consensus         1 ~~kI~ViGa-GswGTALA~~la~ng~-~V~lw~r~~~~~~~i~~~~~----N~~yLp~i~lp~~l~at~Dl~~a~~~ad~   74 (329)
T COG0240           1 MMKIAVIGA-GSWGTALAKVLARNGH-EVRLWGRDEEIVAEINETRE----NPKYLPGILLPPNLKATTDLAEALDGADI   74 (329)
T ss_pred             CceEEEEcC-ChHHHHHHHHHHhcCC-eeEEEecCHHHHHHHHhcCc----CccccCCccCCcccccccCHHHHHhcCCE
Confidence            478999998 7789999999999998 99999998765544432211    222332     223333568888888998


Q ss_pred             EEEe
Q 023689           84 VFHV   87 (278)
Q Consensus        84 vi~~   87 (278)
                      |+-.
T Consensus        75 iv~a   78 (329)
T COG0240          75 IVIA   78 (329)
T ss_pred             EEEE
Confidence            8865

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.25  E-value=0.0068  Score=50.27  Aligned_cols=39  Identities=15%  Similarity=0.123  Sum_probs=33.9

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcc
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSH   49 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~   49 (278)
                      +++|.|.|+ |.+|..++..|+..|+ .|++.+++++..+.
T Consensus         5 ~~~V~ViGa-G~mG~~iA~~~a~~G~-~V~l~d~~~~~~~~   43 (286)
T PRK07819          5 IQRVGVVGA-GQMGAGIAEVCARAGV-DVLVFETTEELATA   43 (286)
T ss_pred             ccEEEEEcc-cHHHHHHHHHHHhCCC-EEEEEECCHHHHHH
Confidence            468999988 9999999999999999 99999998766443

>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1

Probab=96.25  E-value=0.029  Score=46.25  Aligned_cols=42  Identities=17%  Similarity=0.199  Sum_probs=34.2

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCC
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD   46 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~   46 (278)
                      |.++...+|||.|+ |++|.++++.|...|...+++.+.+.-.
T Consensus        14 q~kL~~s~VLIvG~-gGLG~EiaKnLalaGVg~itI~D~d~ve   55 (286)
T cd01491          14 MKKLQKSNVLISGL-GGLGVEIAKNLILAGVKSVTLHDTKPCS   55 (286)
T ss_pred             HHHHhcCcEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCccc
Confidence            45556679999988 8999999999999999788887765433

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1.

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=96.22  E-value=0.025  Score=49.54  Aligned_cols=40  Identities=18%  Similarity=0.231  Sum_probs=34.3

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccc
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL   50 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~   50 (278)
                      +|+|.|.|. |++|..++..|.+.|+ +|++.+++++..+.+
T Consensus         3 ~~kI~VIGl-G~~G~~~A~~La~~G~-~V~~~D~~~~~v~~l   42 (415)
T PRK11064          3 FETISVIGL-GYIGLPTAAAFASRQK-QVIGVDINQHAVDTI   42 (415)
T ss_pred             ccEEEEECc-chhhHHHHHHHHhCCC-EEEEEeCCHHHHHHH
Confidence            478999976 9999999999999999 999999987665543

>TIGR01142 purT phosphoribosylglycinamide formyltransferase 2

Probab=96.22  E-value=0.022  Score=49.35  Aligned_cols=68  Identities=15%  Similarity=0.123  Sum_probs=51.5

Q ss_pred             eEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc--CccEEEEec
Q 023689           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFHVA   88 (278)
Q Consensus        11 ~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vi~~a   88 (278)
                      ||+|.|+ |..|..+++.+.+.|+ .|++++.++......  .      .-..+..|..|.+.+.++++  ++|+|+...
T Consensus         1 kililG~-g~~~~~l~~aa~~~G~-~v~~~d~~~~~~~~~--~------ad~~~~~~~~d~~~l~~~~~~~~id~v~~~~   70 (380)
T TIGR01142         1 RVLLLGS-GELGKEVAIEAQRLGV-EVIAVDRYANAPAMQ--V------AHRSYVINMLDGDALRAVIEREKPDYIVPEI   70 (380)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCC-EEEEEeCCCCCchhh--h------CceEEEcCCCCHHHHHHHHHHhCCCEEEecc
Confidence            6899996 9999999999999999 888887765432211  1      11355678889999998887  799988643

This enzyme is an alternative to PurN (TIGR00639)

>PRK13304 L-aspartate dehydrogenase; Reviewed

Probab=96.22  E-value=0.013  Score=48.10  Aligned_cols=68  Identities=16%  Similarity=0.117  Sum_probs=41.8

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCC--CCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNN--YTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g--~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      ||+|.|.|. |.+|+.+++.|.+.+  .+.+.+.+++++........            .+..-.+++++++.++|+|+.
T Consensus         1 mmrIgIIG~-G~iG~~ia~~l~~~~~~~elv~v~d~~~~~a~~~a~~------------~~~~~~~~~~ell~~~DvVvi   67 (265)
T PRK13304          1 MLKIGIVGC-GAIASLITKAILSGRINAELYAFYDRNLEKAENLASK------------TGAKACLSIDELVEDVDLVVE   67 (265)
T ss_pred             CCEEEEECc-cHHHHHHHHHHHcCCCCeEEEEEECCCHHHHHHHHHh------------cCCeeECCHHHHhcCCCEEEE
Confidence            468999996 999999999998763  52333445544332222110            011112345566688999999


Q ss_pred             ecc
Q 023689           87 VAS   89 (278)
Q Consensus        87 ~a~   89 (278)
                      ++.
T Consensus        68 ~a~   70 (265)
T PRK13304         68 CAS   70 (265)
T ss_pred             cCC
Confidence            874

>PRK13303 L-aspartate dehydrogenase; Provisional

Probab=96.22  E-value=0.067  Score=43.88  Aligned_cols=32  Identities=19%  Similarity=0.253  Sum_probs=24.7

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEe
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATV   41 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~   41 (278)
                      |+||.|.|. |.||+.+++.|.+....++.+..
T Consensus         1 m~rVgIiG~-G~iG~~~~~~l~~~~~~~l~~v~   32 (265)
T PRK13303          1 MMKVAMIGF-GAIGAAVLELLEHDPDLRVDWVI   32 (265)
T ss_pred             CcEEEEECC-CHHHHHHHHHHhhCCCceEEEEE
Confidence            479999999 99999999999876322554444

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=96.20  E-value=0.017  Score=50.86  Aligned_cols=68  Identities=16%  Similarity=0.057  Sum_probs=48.1

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      .+.+|+++|+|. |.||+.+++.|...|+ .|++..+++.........      ++..        ..+.++++.+|+|+
T Consensus       251 ~LaGKtVgVIG~-G~IGr~vA~rL~a~Ga-~ViV~e~dp~~a~~A~~~------G~~~--------~~leell~~ADIVI  314 (476)
T PTZ00075        251 MIAGKTVVVCGY-GDVGKGCAQALRGFGA-RVVVTEIDPICALQAAME------GYQV--------VTLEDVVETADIFV  314 (476)
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHhc------Ccee--------ccHHHHHhcCCEEE
Confidence            356899999997 7899999999999999 888887765433111110      2221        13567788999999


Q ss_pred             Eecc
Q 023689           86 HVAS   89 (278)
Q Consensus        86 ~~a~   89 (278)
                      .+.+
T Consensus       315 ~atG  318 (476)
T PTZ00075        315 TATG  318 (476)
T ss_pred             ECCC
Confidence            7754

>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional

Probab=96.16  E-value=0.0088  Score=49.92  Aligned_cols=65  Identities=14%  Similarity=0.181  Sum_probs=44.7

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEec
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a   88 (278)
                      |++|.|.|. |.+|..+++.|.+.|+ .|.+.+|+++..+.+...      +.       ....+..++++.+|+||-+.
T Consensus         1 m~~Ig~IGl-G~mG~~mA~~l~~~G~-~V~v~d~~~~~~~~~~~~------g~-------~~~~s~~~~~~~aDvVi~~v   65 (296)
T PRK15461          1 MAAIAFIGL-GQMGSPMASNLLKQGH-QLQVFDVNPQAVDALVDK------GA-------TPAASPAQAAAGAEFVITML   65 (296)
T ss_pred             CCeEEEEee-CHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHc------CC-------cccCCHHHHHhcCCEEEEec
Confidence            357899976 9999999999999999 899998877654443221      11       11123455667777777653

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=96.15  E-value=0.0066  Score=51.45  Aligned_cols=39  Identities=21%  Similarity=0.087  Sum_probs=33.0

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcc
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSH   49 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~   49 (278)
                      +|+|.|.|+ |-+|..++..|.+.|+ +|.+..|+++..+.
T Consensus         4 ~m~I~iIG~-G~mG~~ia~~L~~~G~-~V~~~~r~~~~~~~   42 (328)
T PRK14618          4 GMRVAVLGA-GAWGTALAVLAASKGV-PVRLWARRPEFAAA   42 (328)
T ss_pred             CCeEEEECc-CHHHHHHHHHHHHCCC-eEEEEeCCHHHHHH
Confidence            568999977 9999999999999999 89999997654333

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=96.14  E-value=0.0038  Score=48.18  Aligned_cols=40  Identities=18%  Similarity=0.263  Sum_probs=30.2

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF   51 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~   51 (278)
                      |||-|.|. |++|..++..|.+.|+ .|++.+.+++..+.+.
T Consensus         1 M~I~ViGl-GyvGl~~A~~lA~~G~-~V~g~D~~~~~v~~l~   40 (185)
T PF03721_consen    1 MKIAVIGL-GYVGLPLAAALAEKGH-QVIGVDIDEEKVEALN   40 (185)
T ss_dssp             -EEEEE---STTHHHHHHHHHHTTS-EEEEE-S-HHHHHHHH
T ss_pred             CEEEEECC-CcchHHHHHHHHhCCC-EEEEEeCChHHHHHHh
Confidence            58888865 9999999999999999 9999998776554443

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=96.14  E-value=0.0071  Score=50.02  Aligned_cols=65  Identities=17%  Similarity=0.171  Sum_probs=43.7

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEec
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a   88 (278)
                      |+|.|.| .|.+|..++..|.+.|+ .|.+.+++++..+.....      +.    .+... ... +.++++|+||-+.
T Consensus         1 m~I~IIG-~G~mG~sla~~L~~~g~-~V~~~d~~~~~~~~a~~~------g~----~~~~~-~~~-~~~~~aDlVilav   65 (279)
T PRK07417          1 MKIGIVG-LGLIGGSLGLDLRSLGH-TVYGVSRRESTCERAIER------GL----VDEAS-TDL-SLLKDCDLVILAL   65 (279)
T ss_pred             CeEEEEe-ecHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHC------CC----ccccc-CCH-hHhcCCCEEEEcC
Confidence            4789998 59999999999999998 899998876544433221      11    11111 112 3567889998774

>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.14  E-value=0.019  Score=47.18  Aligned_cols=59  Identities=17%  Similarity=0.218  Sum_probs=46.7

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      ++.||+|.|.|.||.+|+.++..|+++|+ .|+.. ++.                        +  ..+.+.++++|+||
T Consensus       155 ~l~Gk~v~vIG~S~ivG~Pla~lL~~~ga-tVtv~-~s~------------------------t--~~l~~~~~~ADIVI  206 (284)
T PRK14179        155 ELEGKHAVVIGRSNIVGKPMAQLLLDKNA-TVTLT-HSR------------------------T--RNLAEVARKADILV  206 (284)
T ss_pred             CCCCCEEEEECCCCcCcHHHHHHHHHCCC-EEEEE-CCC------------------------C--CCHHHHHhhCCEEE
Confidence            45789999999999999999999999999 77655 110                        0  13677888999999


Q ss_pred             EecccCC
Q 023689           86 HVASPCT   92 (278)
Q Consensus        86 ~~a~~~~   92 (278)
                      -+.|...
T Consensus       207 ~avg~~~  213 (284)
T PRK14179        207 VAIGRGH  213 (284)
T ss_pred             EecCccc
Confidence            8887644

>PRK06153 hypothetical protein; Provisional

Probab=96.13  E-value=0.085  Score=45.16  Aligned_cols=104  Identities=13%  Similarity=0.174  Sum_probs=62.8

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCC---------C-------------CCCCceEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP---------G-------------AGDANLRV   63 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~---------~-------------~~~~~v~~   63 (278)
                      +++..+|+|.|+ |++|++++..|.+.|..++++++.+.-....+....         .             .-..++..
T Consensus       173 kL~~~~VaIVG~-GG~GS~Va~~LAR~GVgeI~LVD~D~Ve~SNLnRQ~gaf~~~DvGk~~~KVevaa~rl~~in~~I~~  251 (393)
T PRK06153        173 KLEGQRIAIIGL-GGTGSYILDLVAKTPVREIHLFDGDDFLQHNAFRSPGAASIEELREAPKKVDYFKSRYSNMRRGIVP  251 (393)
T ss_pred             HHhhCcEEEEcC-CccHHHHHHHHHHcCCCEEEEECCCEecccccccccccCCHhHcCCcchHHHHHHHHHHHhCCeEEE
Confidence            455679999988 999999999999999878887766432222221110         0             00013444


Q ss_pred             EEccCCChhhHHHHhcCccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEec
Q 023689           64 FEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS  130 (278)
Q Consensus        64 ~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~S  130 (278)
                      +...+ +++.+. .++++|+||.|.-                 |..+-..+.++|.+.++. +|.++
T Consensus       252 ~~~~I-~~~n~~-~L~~~DiV~dcvD-----------------n~~aR~~ln~~a~~~gIP-~Id~G  298 (393)
T PRK06153        252 HPEYI-DEDNVD-ELDGFTFVFVCVD-----------------KGSSRKLIVDYLEALGIP-FIDVG  298 (393)
T ss_pred             EeecC-CHHHHH-HhcCCCEEEEcCC-----------------CHHHHHHHHHHHHHcCCC-EEEee
Confidence            44445 444444 5678888887742                 122233466777777653 66554

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=96.11  E-value=0.024  Score=46.84  Aligned_cols=75  Identities=12%  Similarity=0.089  Sum_probs=46.5

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCCh-hhHHHHh--cCccEE
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS-GAVSRAV--EGCKGV   84 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~-~~~~~~~--~~~d~v   84 (278)
                      .+.+|||.|+ |.+|...++.+...|...|++.++++++.+..+.+      ++..+ .|..+. +.+.+..  .++|++
T Consensus       120 ~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~a~~~------Ga~~~-i~~~~~~~~~~~~~~~~g~d~v  191 (280)
T TIGR03366       120 KGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRRELALSF------GATAL-AEPEVLAERQGGLQNGRGVDVA  191 (280)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc------CCcEe-cCchhhHHHHHHHhCCCCCCEE
Confidence            4679999987 88999999988888984477776665544433333      22111 122221 2233333  258999


Q ss_pred             EEeccc
Q 023689           85 FHVASP   90 (278)
Q Consensus        85 i~~a~~   90 (278)
                      |.+.|.
T Consensus       192 id~~G~  197 (280)
T TIGR03366       192 LEFSGA  197 (280)
T ss_pred             EECCCC
Confidence            998753

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial

Probab=96.09  E-value=0.048  Score=46.46  Aligned_cols=94  Identities=13%  Similarity=0.141  Sum_probs=52.8

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHC-CC--CeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDN-NY--TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~-g~--~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      |+|-|.||||.+|+.+++.|.++ ..  .+++.+..+....... .+.+.   ..  ..-++.+.    +.++++|++|.
T Consensus         1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~~s~g~~~-~f~~~---~~--~v~~~~~~----~~~~~vDivff   70 (366)
T TIGR01745         1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFSTSQLGQAAP-SFGGT---TG--TLQDAFDI----DALKALDIIIT   70 (366)
T ss_pred             CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEchhhCCCcC-CCCCC---cc--eEEcCccc----ccccCCCEEEE
Confidence            47899999999999999999844 44  2334443322221111 11110   11  22233332    24578999998


Q ss_pred             ecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCC-EEEEecc
Q 023689           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTSS  131 (278)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~-~~v~~Ss  131 (278)
                      +++..        .          +..+...+++.|.. .+|=-||
T Consensus        71 a~g~~--------~----------s~~~~p~~~~aG~~~~VIDnSS   98 (366)
T TIGR01745        71 CQGGD--------Y----------TNEIYPKLRESGWQGYWIDAAS   98 (366)
T ss_pred             cCCHH--------H----------HHHHHHHHHhCCCCeEEEECCh
Confidence            87541        1          44566777777753 3444444

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=96.08  E-value=0.012  Score=50.39  Aligned_cols=42  Identities=14%  Similarity=0.166  Sum_probs=34.4

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccc
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL   50 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~   50 (278)
                      .+.+|||+|++|.+|..+++.+...|. .|+++++++++.+.+
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~-~Vi~~~~~~~k~~~~  199 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLL  199 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHH
Confidence            367999999999999999998888899 788887766554443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	278
2c29_D	337	Structure Of Dihydroflavonol Reductase From Vitis V		1e-45
2rh8_A	338	Structure Of Apo Anthocyanidin Reductase From Vitis		4e-42
2p4h_X	322	Crystal Structure Of Vestitone Reductase From Alfal		2e-38
1y1p_A	342	X-Ray Structure Of Aldehyde Reductase With Nadph Le		1e-18
1ujm_A	342	Crystal Structure Of Aldehyde Reductase 2 From Spor		2e-18
1r6d_A	337	Crystal Structure Of Desiv Double Mutant (Dtdp-Gluc		4e-09
1r66_A	337	Crystal Structure Of Desiv (Dtdp-Glucose 4,6-Dehydr		5e-09
4ef7_B	337	Udp-Xylose Synthase Length = 337		6e-08
3a1n_A	317	Crystal Structure Of L-Threonine Dehydrogenase From		7e-08
3a9w_A	317	Crystal Structure Of L-Threonine Bound L-Threonine		2e-07
2pk3_A	321	Crystal Structure Of A Gdp-4-Keto-6-Deoxy-D-Mannose		1e-06
1i3k_A	348	Molecular Basis For Severe Epimerase-Deficiency Gal		2e-06
1ek5_A	348	Structure Of Human Udp-Galactose 4-Epimerase In Com		2e-06
1hzj_A	348	Human Udp-Galactose 4-Epimerase: Accommodation Of U		2e-06
3ay3_A	267	Crystal Structure Of Glucuronic Acid Dehydrogeanse		4e-06
2b69_A	343	Crystal Structure Of Human Udp-Glucoronic Acid Deca		1e-05
1u9j_A	358	Crystal Structure Of E. Coli Arna (Pmri) Decarboxyl		1e-05
1z74_A	358	Crystal Structure Of E.Coli Arna Dehydrogenase (Dec		1e-05
1z7b_A	358	Crystal Structure Of E.Coli Arna Dehydrogenase (Dec		1e-05
1z75_A	358	Crystal Structure Of Arna Dehydrogenase (decarboxyl		2e-05
1z7e_A	660	Crystal Structure Of Full Length Arna Length = 660		2e-05
2bll_A	345	Apo-Structure Of The C-Terminal Decarboxylase Domai		2e-05
1z73_A	358	Crystal Structure Of E. Coli Arna Dehydrogenase (de		4e-05
3rft_A	267	Crystal Structure Of Uronate Dehydrogenase From Agr		8e-05
1g1a_A	361	The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydra		1e-04
3ehe_A	313	Crystal Structure Of Udp-Glucose 4 Epimerase (Gale-		2e-04
1z45_A	699	Crystal Structure Of The Gal10 Fusion Protein Galac		3e-04
2pzk_A	330	Crystal Structure Of The Bordetella Bronchiseptica		3e-04
3aw9_A	308	Structure Of Udp-Galactose 4-Epimerase Mutant Lengt		3e-04
3icp_A	312	Crystal Structure Of Udp-Galactose 4-Epimerase Leng		4e-04
1kep_A	348	The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydra		8e-04

>pdb|2C29|D Chain D, Structure Of Dihydroflavonol Reductase From Vitis Vinifera At 1.8 A. Length = 337

Iteration: 1
 Score =  179 bits (454), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 105/277 (37%), Positives = 167/277 (60%), Gaps = 12/277 (4%)
Query: 8   EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS---HLFALPGAGDANLRVF 64
           + ETVCVTGA+GFIG+WLV  LL+  YT + ATV   ++     HL  LP A + +L ++
Sbjct: 4   QSETVCVTGASGFIGSWLVMRLLERGYT-VRATVRDPTNVKKVKHLLDLPKA-ETHLTLW 61
Query: 65  EADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEA-AKRFGV 123
           +AD+ D G+   A++GC GVFHVA+P   E   DPE E+I P ++G L ++++ A    V
Sbjct: 62  KADLADEGSFDEAIKGCTGVFHVATPMDFESK-DPENEVIKPTIEGMLGIMKSCAAAKTV 120
Query: 124 RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK--W-YPVSKTLAEKAAWEFAE 180
           RR+V TSS +  V     +  V+DE+ W+D+E+C+++K   W Y VSKTLAE+AAW++A+
Sbjct: 121 RRLVFTSS-AGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAK 179
Query: 181 KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA-VPVKDVAKAQV 239
           ++ +D + I P   +GP +   +  S       + G++        G  V + D+  A +
Sbjct: 180 ENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDDLCNAHI 239
Query: 240 LLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPV 276
            LFE+P A GRY+C++      D A+ + + +PE+ +
Sbjct: 240 YLFENPKAEGRYICSSHDCIILDLAKMLREKYPEYNI 276

>pdb|2RH8|A Chain A, Structure Of Apo Anthocyanidin Reductase From Vitis Vinifera Length = 338

Iteration: 1
 Score =  167 bits (424), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 107/292 (36%), Positives = 164/292 (56%), Gaps = 20/292 (6%)
Query: 1   MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS---SHLFALPGAG 57
           MA++    ++T CV G  GF+ + LVK LL   Y ++N TV    +    SHL  L   G
Sbjct: 1   MATQHPIGKKTACVVGGTGFVASLLVKLLLQKGY-AVNTTVRDPDNQKKVSHLLELQELG 59
Query: 58  DANLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEA 117
           D  L++F AD+ D  +    + GC  VFHVA+P       DPE ++I PA+QG +NV++A
Sbjct: 60  D--LKIFRADLTDELSFEAPIAGCDFVFHVATPVHFASE-DPENDMIKPAIQGVVNVMKA 116
Query: 118 AKRF-GVRRVVVTSSISAIVPNP-GWKGKVFDETSWTDLEYCKSRK--KW-YPVSKTLAE 172
             R   V+RV++TSS +A+  N     G V DE +WTD+E+  S K   W YP SKTLAE
Sbjct: 117 CTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGYPASKTLAE 176
Query: 173 KAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSK----DTQEYHWL-G 227
           KAAW+FAE++ +D++ + P    G  +   + +S  +   L+ G++      +    L G
Sbjct: 177 KAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSG 236
Query: 228 AVP---VKDVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPV 276
           +V    V+DV +A + + E  +ASGRY+C        + A+ +SK +P++ V
Sbjct: 237 SVSIAHVEDVCRAHIFVAEKESASGRYICCAANTSVPELAKFLSKRYPQYKV 288

>pdb|2P4H|X Chain X, Crystal Structure Of Vestitone Reductase From Alfalfa (Medicago Sativa L.) Length = 322

Iteration: 1
 Score =  155 bits (393), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/272 (37%), Positives = 148/272 (54%), Gaps = 10/272 (3%)
Query: 12  VCVTGANGFIGTWLVKTLLDNNY---TSINATVFPGSDSSHLFALPGAGDANLRVFEADV 68
           VCVTG  GF+G+W++K+LL+N Y   T+I A      D S L  LPGA +  L  F AD+
Sbjct: 4   VCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASE-KLHFFNADL 62
Query: 69  LDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEA-AKRFGVRRVV 127
            +  + + A+EGC G+FH ASP       +PE+ +    V G L +L+A      V+R +
Sbjct: 63  SNPDSFAAAIEGCVGIFHTASPIDFA-VSEPEEIVTKRTVDGALGILKACVNSKTVKRFI 121
Query: 128 VTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW---YPVSKTLAEKAAWEFAEKHGV 184
            TSS SA+  N G    V DE+ W+D++  +S K +   Y VSKTLAEKA  EF E++G+
Sbjct: 122 YTSSGSAVSFN-GKDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQNGI 180
Query: 185 DVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFES 244
           DVV +     +G  + P L  S      L+ G K+         V V DVA+A + L E+
Sbjct: 181 DVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVTRFHMVHVDDVARAHIYLLEN 240
Query: 245 PAASGRYLCTNGIYQFGDFAERVSKLFPEFPV 276
               GRY C+  I    + ++ +S  +PE+ +
Sbjct: 241 SVPGGRYNCSPFIVPIEEMSQLLSAKYPEYQI 272

>pdb|1Y1P|A Chain A, X-Ray Structure Of Aldehyde Reductase With Nadph Length = 342

Iteration: 1
 Score = 89.7 bits (221), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/212 (35%), Positives = 106/212 (50%), Gaps = 24/212 (11%)
Query: 8   EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGA---GDANLRVF 64
           E   V VTGANGF+ + +V+ LL++ Y  +  T    S  ++L     A   G     V 
Sbjct: 10  EGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSASKLANLQKRWDAKYPGRFETAVV 68
Query: 65  EADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-GV 123
           E D+L  GA    ++G  GV H+AS  +  +  D   E++ PA+ GTLN L AA     V
Sbjct: 69  E-DMLKQGAYDEVIKGAAGVAHIASVVSFSNKYD---EVVTPAIGGTLNALRAAAATPSV 124
Query: 124 RRVVVTSS-ISAIVPNPGWKGKVFDETSWTDLEYCKSRKK----------W-YPVSKTLA 171
           +R V+TSS +SA++P P  +G   DE SW +LE     K           W Y  SKT A
Sbjct: 125 KRFVLTSSTVSALIPKPNVEGIYLDEKSW-NLESIDKAKTLPESDPQKSLWVYAASKTEA 183
Query: 172 EKAAWEFAE--KHGVDVVAIHPATCLGPLMQP 201
           E AAW+F +  K    + A+ P   +G +  P
Sbjct: 184 ELAAWKFMDENKPHFTLNAVLPNYTIGTIFDP 215

>pdb|1UJM|A Chain A, Crystal Structure Of Aldehyde Reductase 2 From Sporobolomyces Salmonicolor Aku4429 Length = 342

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/212 (35%), Positives = 105/212 (49%), Gaps = 24/212 (11%)
Query: 8   EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGA---GDANLRVF 64
           E   V VTGANGF+ + +V+ LL++ Y  +  T    S  ++L     A   G     V 
Sbjct: 10  EGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSASKLANLQKRWDAKYPGRFETAVV 68
Query: 65  EADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-GV 123
           E D L  GA    ++G  GV H+AS  +  +  D   E++ PA+ GTLN L AA     V
Sbjct: 69  E-DXLKQGAYDEVIKGAAGVAHIASVVSFSNKYD---EVVTPAIGGTLNALRAAAATPSV 124
Query: 124 RRVVVTSS-ISAIVPNPGWKGKVFDETSWTDLEYCKSRKK----------W-YPVSKTLA 171
           +R V+TSS +SA++P P  +G   DE SW +LE     K           W Y  SKT A
Sbjct: 125 KRFVLTSSTVSALIPKPNVEGIYLDEKSW-NLESIDKAKTLPESDPQKSLWVYAASKTEA 183
Query: 172 EKAAWEFAE--KHGVDVVAIHPATCLGPLMQP 201
           E AAW+F +  K    + A+ P   +G +  P
Sbjct: 184 ELAAWKFXDENKPHFTLNAVLPNYTIGTIFDP 215

>pdb|1R6D|A Chain A, Crystal Structure Of Desiv Double Mutant (Dtdp-Glucose 4,6- Dehydratase) From Streptomyces Venezuelae With Nad And Dau Bound Length = 337

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 76/195 (38%), Gaps = 14/195 (7%)
Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-----SHLFALPGAGDANLRVFEA 66
           + VTG  GFIG+  V+ LL   Y  + A      DS     +     P   D  LR    
Sbjct: 3   LLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHG 62
Query: 67  DVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRV 126
           D+ D+G ++R + G   + H A+   ++  +          VQGT  +L+ A   GV RV
Sbjct: 63  DIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRV 122
Query: 127 VVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDV 186
           V  S+               D  SWT+    +     Y  SK  ++  A  +   +G+DV
Sbjct: 123 VHVSTNQVY--------GSIDSGSWTESSPLEPNSP-YAASKAGSDLVARAYHRTYGLDV 173
Query: 187 VAIHPATCLGPLMQP 201
                    GP   P
Sbjct: 174 RITRCCNNYGPYQHP 188

>pdb|1R66|A Chain A, Crystal Structure Of Desiv (Dtdp-Glucose 4,6-Dehydratase) From Streptomyces Venezuelae With Nad And Tyd Bound Length = 337

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 76/195 (38%), Gaps = 14/195 (7%)
Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-----SHLFALPGAGDANLRVFEA 66
           + VTG  GFIG+  V+ LL   Y  + A      DS     +     P   D  LR    
Sbjct: 3   LLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHG 62
Query: 67  DVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRV 126
           D+ D+G ++R + G   + H A+   ++  +          VQGT  +L+ A   GV RV
Sbjct: 63  DIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRV 122
Query: 127 VVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDV 186
           V  S+               D  SWT+    +     Y  SK  ++  A  +   +G+DV
Sbjct: 123 VHVSTDEVY--------GSIDSGSWTESSPLEPNSP-YAASKAGSDLVARAYHRTYGLDV 173
Query: 187 VAIHPATCLGPLMQP 201
                    GP   P
Sbjct: 174 RITRCCNNYGPYQHP 188

>pdb|3A1N|A Chain A, Crystal Structure Of L-Threonine Dehydrogenase From Hyperthermophilic Archaeon Thermoplasma Volcanium Length = 317

Iteration: 1
 Score = 54.3 bits (129), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 72/280 (25%), Positives = 116/280 (41%), Gaps = 35/280 (12%)
Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           + VTG++G IGT LV  L +  Y   N        +S +      G   ++    DV + 
Sbjct: 2   ILVTGSSGQIGTELVPYLAEK-YGKKNVI------ASDIVQRDTGG---IKFITLDVSNR 51
Query: 72  GAVSRAVE--GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVT 129
             + RAVE      +FH+A   + +   DP     +  + GT N+LEAAK+  V +VV+ 
Sbjct: 52  DEIDRAVEKYSIDAIFHLAGILSAKGEKDPALAYKV-NMNGTYNILEAAKQHRVEKVVIP 110
Query: 130 SSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAI 189
           S+I    P    K KV   T           +  Y V+K  AE     + EK G+DV ++
Sbjct: 111 STIGVFGPETP-KNKVPSIT-------ITRPRTMYGVTKIAAELLGQYYYEKFGLDVRSL 162
Query: 190 HPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG---AVPVK---DVAKAQVLLFE 243
                +    +P    +   ++      K  +   +L    A+P+    D  KA V L+E
Sbjct: 163 RYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYE 222
Query: 244 SPAASGRYLCTNGI----YQF--GDFAERVSKLFPEFPVH 277
             A   + +  NG     Y F   +   ++ +  PEF + 
Sbjct: 223 --ADRDKLVLRNGYNVTAYTFTPSELYSKIKERIPEFEIE 260

>pdb|3A9W|A Chain A, Crystal Structure Of L-Threonine Bound L-Threonine Dehydrogenase (Y137f) From Hyperthermophilic Archaeon Thermoplasma Volcanium Length = 317

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/280 (25%), Positives = 116/280 (41%), Gaps = 35/280 (12%)
Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           + VTG++G IGT LV  L +  Y   N        +S +      G   ++    DV + 
Sbjct: 2   ILVTGSSGQIGTELVPYLAEK-YGKKNVI------ASDIVQRDTGG---IKFITLDVSNR 51
Query: 72  GAVSRAVE--GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVT 129
             + RAVE      +FH+A   + +   DP     +  + GT N+LEAAK+  V +VV+ 
Sbjct: 52  DEIDRAVEKYSIDAIFHLAGILSAKGEKDPALAYKV-NMNGTYNILEAAKQHRVEKVVIP 110
Query: 130 SSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAI 189
           S+I    P    K KV   T           +  + V+K  AE     + EK G+DV ++
Sbjct: 111 STIGVFGPETP-KNKVPSIT-------ITRPRTMFGVTKIAAELLGQYYYEKFGLDVRSL 162
Query: 190 HPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG---AVPVK---DVAKAQVLLFE 243
                +    +P    +   ++      K  +   +L    A+P+    D  KA V L+E
Sbjct: 163 RYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYE 222
Query: 244 SPAASGRYLCTNGI----YQF--GDFAERVSKLFPEFPVH 277
             A   + +  NG     Y F   +   ++ +  PEF + 
Sbjct: 223 --ADRDKLVLRNGYNVTAYTFTPSELYSKIKERIPEFEIE 260

>pdb|2PK3|A Chain A, Crystal Structure Of A Gdp-4-Keto-6-Deoxy-D-Mannose Reductase Length = 321

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/187 (24%), Positives = 83/187 (44%), Gaps = 19/187 (10%)
Query: 13  CVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSG 72
            +TG  GF+G +L      N+ T  N  VF G+  ++   LP     N+ +   D++DS 
Sbjct: 16  LITGVAGFVGKYLA-----NHLTEQNVEVF-GTSRNNEAKLP-----NVEMISLDIMDSQ 64
Query: 73  AVSRAVEGCKG--VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
            V + +   K   +FH+A+  +++D    +K      V GTL+VL+A +   +   ++T 
Sbjct: 65  RVKKVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILT- 123
Query: 131 SISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIH 190
                + +    G +  E S    E        Y VSK      A ++ + +G+D++   
Sbjct: 124 -----IGSSEEYGMILPEESPVSEENQLRPMSPYGVSKASVGMLARQYVKAYGMDIIHTR 178
Query: 191 PATCLGP 197
               +GP
Sbjct: 179 TFNHIGP 185

>pdb|1I3K|A Chain A, Molecular Basis For Severe Epimerase-Deficiency Galactosemia: X-Ray Structure Of The Human V94m- Substituted Udp-Galactose 4-Epimerase Length = 348

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 71/178 (39%), Gaps = 26/178 (14%)
Query: 10  ETVCVTGANGFIGTWLVKTLLDNNYTSI------NATVFPGSDSSHLFALPGAGDANLRV 63
           E V VTG  G+IG+  V  LL+  Y  +      NA    GS    L  +      ++  
Sbjct: 3   EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEF 62
Query: 64  FEADVLDSGAVSRAVE--GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF 121
            E D+LD GA+ R  +      V H A    + + V    +     + GT+ +LE  K  
Sbjct: 63  EEMDILDQGALQRLFKKYSFMAVIHFAGLKAMGESVQKPLDYYRVNLTGTIQLLEIMKAH 122
Query: 122 GVRRVVVTSSISAI----------------VPNPGWKGKVFDETSWTDLEYCKSRKKW 163
           GV+ +V +SS +                    NP  K K F E    DL  C++ K W
Sbjct: 123 GVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDL--CQADKTW 178

>pdb|1EK5|A Chain A, Structure Of Human Udp-Galactose 4-Epimerase In Complex With Nad+ Length = 348

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 72/181 (39%), Gaps = 26/181 (14%)
Query: 10  ETVCVTGANGFIGTWLVKTLLDNNYTSI------NATVFPGSDSSHLFALPGAGDANLRV 63
           E V VTG  G+IG+  V  LL+  Y  +      NA    GS    L  +      ++  
Sbjct: 3   EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEF 62
Query: 64  FEADVLDSGAVSRAVE--GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF 121
            E D+LD GA+ R  +      V H A    + + V    +     + GT+ +LE  K  
Sbjct: 63  EEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH 122
Query: 122 GVRRVVVTSSISAI----------------VPNPGWKGKVFDETSWTDLEYCKSRKKWYP 165
           GV+ +V +SS +                    NP  K K F E    DL  C++ K W  
Sbjct: 123 GVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDL--CQADKTWNA 180
Query: 166 V 166
           V
Sbjct: 181 V 181

>pdb|1HZJ|A Chain A, Human Udp-Galactose 4-Epimerase: Accommodation Of Udp-N- Acetylglucosamine Within The Active Site Length = 348

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 71/178 (39%), Gaps = 26/178 (14%)
Query: 10  ETVCVTGANGFIGTWLVKTLLDNNYTSI------NATVFPGSDSSHLFALPGAGDANLRV 63
           E V VTG  G+IG+  V  LL+  Y  +      NA    GS    L  +      ++  
Sbjct: 3   EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEF 62
Query: 64  FEADVLDSGAVSRAVE--GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF 121
            E D+LD GA+ R  +      V H A    + + V    +     + GT+ +LE  K  
Sbjct: 63  EEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH 122
Query: 122 GVRRVVVTSSISAI----------------VPNPGWKGKVFDETSWTDLEYCKSRKKW 163
           GV+ +V +SS +                    NP  K K F E    DL  C++ K W
Sbjct: 123 GVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDL--CQADKTW 178

>pdb|3AY3|A Chain A, Crystal Structure Of Glucuronic Acid Dehydrogeanse From Chromohalobacter Salexigens Length = 267

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 62/141 (43%), Gaps = 12/141 (8%)
Query: 55  GAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNV 114
           GA +A+  +   D+ D+ AV   V+ C G+ H+    ++E P +   +++   + G  N+
Sbjct: 38  GAAEAHEEIVACDLADAQAVHDLVKDCDGIIHLGG-VSVERPWN---DILQANIIGAYNL 93
Query: 115 LEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKA 174
            EAA+  G  R+V  SS   I   P         T+  D E  +     Y +SK   E  
Sbjct: 94  YEAARNLGKPRIVFASSNHTIGYYP--------RTTRIDTEVPRRPDSLYGLSKCFGEDL 145
Query: 175 AWEFAEKHGVDVVAIHPATCL 195
           A  +  K  ++ + I   +C 
Sbjct: 146 ASLYYHKFDIETLNIRIGSCF 166

>pdb|2B69|A Chain A, Crystal Structure Of Human Udp-Glucoronic Acid Decarboxylase Length = 343

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 83/194 (42%), Gaps = 16/194 (8%)
Query: 6   EKEEETVCVTGANGFIGTWLVKTL-LDNNYTSINATVFPGSDSSHLFALPGAGDANLRVF 64
           EK+ + + +TG  GF+G+ L   L  D +  ++    F G   +    +   G  N  + 
Sbjct: 24  EKDRKRILITGGAGFVGSHLTDKLXXDGHEVTVVDNFFTGRKRNVEHWI---GHENFELI 80
Query: 65  EADVLDSGAVSRAVEGCKGVFHVASPCTLED-PVDPEKELILPAVQGTLNVLEAAKRFGV 123
             DV++   +         ++H+ASP +  +   +P K L    + GTLN L  AKR G 
Sbjct: 81  NHDVVEPLYIE-----VDQIYHLASPASPPNYXYNPIKTLKTNTI-GTLNXLGLAKRVGA 134
Query: 124 RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHG 183
           R  ++ +S S +  +P    +   E  W  +     R   Y   K +AE   + + ++ G
Sbjct: 135 R--LLLASTSEVYGDPEVHPQ--SEDYWGHVNPIGPR-ACYDEGKRVAETXCYAYXKQEG 189
Query: 184 VDVVAIHPATCLGP 197
           V+V         GP
Sbjct: 190 VEVRVARIFNTFGP 203

>pdb|1U9J|A Chain A, Crystal Structure Of E. Coli Arna (Pmri) Decarboxylase Domain Length = 358

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/216 (23%), Positives = 89/216 (41%), Gaps = 17/216 (7%)
Query: 7   KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEA 66
           +    V + G NGFIG  L + LL  ++  +      GSD+   F        +    E 
Sbjct: 11  RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDI-GSDAISRFL----NHPHFHFVEG 65
Query: 67  DV-LDSGAVSRAVEGCKGVFHVASPCT-LEDPVDPEKELILPAVQGTLNVLEAAKRFGVR 124
           D+ + S  +   V+ C  V  + +  T +E   +P +   L   +  L ++    ++  R
Sbjct: 66  DISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFEL-DFEENLRIIRYCVKY--R 122
Query: 125 RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW-YPVSKTLAEKAAWEFAEKHG 183
           + ++  S S +        K FDE     +    ++ +W Y VSK L ++  W + EK G
Sbjct: 123 KRIIFPSTSEVYGM--CSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEG 180
Query: 184 VDVVAIHPATCLGP----LMQPYLNASCAVLQQLLQ 215
           +      P   +GP    L    + +S A+ Q +L 
Sbjct: 181 LQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILN 216

>pdb|1Z74|A Chain A, Crystal Structure Of E.Coli Arna Dehydrogenase (Decarboxylase) Domain, R619y Mutant Length = 358

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/216 (23%), Positives = 89/216 (41%), Gaps = 17/216 (7%)
Query: 7   KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEA 66
           +    V + G NGFIG  L + LL  ++  +      GSD+   F        +    E 
Sbjct: 11  RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDI-GSDAISRFL----NHPHFHFVEG 65
Query: 67  DV-LDSGAVSRAVEGCKGVFHVASPCT-LEDPVDPEKELILPAVQGTLNVLEAAKRFGVR 124
           D+ + S  +   V+ C  V  + +  T +E   +P +   L   +  L ++    ++  R
Sbjct: 66  DISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFEL-DFEENLRIIRYCVKY--R 122
Query: 125 RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW-YPVSKTLAEKAAWEFAEKHG 183
           + ++  S S +        K FDE     +    ++ +W Y VSK L ++  W + EK G
Sbjct: 123 KRIIFPSTSEVYGM--CSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEG 180
Query: 184 VDVVAIHPATCLGP----LMQPYLNASCAVLQQLLQ 215
           +      P   +GP    L    + +S A+ Q +L 
Sbjct: 181 LQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILN 216

>pdb|1Z7B|A Chain A, Crystal Structure Of E.Coli Arna Dehydrogenase (Decarboxylase) Domain, R619e Mutant Length = 358

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/216 (23%), Positives = 89/216 (41%), Gaps = 17/216 (7%)
Query: 7   KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEA 66
           +    V + G NGFIG  L + LL  ++  +      GSD+   F        +    E 
Sbjct: 11  RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDI-GSDAISRFL----NHPHFHFVEG 65
Query: 67  DV-LDSGAVSRAVEGCKGVFHVASPCT-LEDPVDPEKELILPAVQGTLNVLEAAKRFGVR 124
           D+ + S  +   V+ C  V  + +  T +E   +P +   L   +  L ++    ++  R
Sbjct: 66  DISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFEL-DFEENLRIIRYCVKY--R 122
Query: 125 RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW-YPVSKTLAEKAAWEFAEKHG 183
           + ++  S S +        K FDE     +    ++ +W Y VSK L ++  W + EK G
Sbjct: 123 KRIIFPSTSEVYGM--CSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEG 180
Query: 184 VDVVAIHPATCLGP----LMQPYLNASCAVLQQLLQ 215
           +      P   +GP    L    + +S A+ Q +L 
Sbjct: 181 LQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILN 216

>pdb|1Z75|A Chain A, Crystal Structure Of Arna Dehydrogenase (decarboxylase) Domain, R619m Mutant Length = 358

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/216 (23%), Positives = 89/216 (41%), Gaps = 17/216 (7%)
Query: 7   KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEA 66
           +    V + G NGFIG  L + LL  ++  +      GSD+   F        +    E 
Sbjct: 11  RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDI-GSDAISRFL----NHPHFHFVEG 65
Query: 67  DV-LDSGAVSRAVEGCKGVFHVASPCT-LEDPVDPEKELILPAVQGTLNVLEAAKRFGVR 124
           D+ + S  +   V+ C  V  + +  T +E   +P +   L   +  L ++    ++  R
Sbjct: 66  DISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFEL-DFEENLRIIRYCVKY--R 122
Query: 125 RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW-YPVSKTLAEKAAWEFAEKHG 183
           + ++  S S +        K FDE     +    ++ +W Y VSK L ++  W + EK G
Sbjct: 123 KRIIFPSTSEVYGM--CSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEG 180
Query: 184 VDVVAIHPATCLGP----LMQPYLNASCAVLQQLLQ 215
           +      P   +GP    L    + +S A+ Q +L 
Sbjct: 181 LQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILN 216

>pdb|1Z7E|A Chain A, Crystal Structure Of Full Length Arna Length = 660

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/216 (23%), Positives = 89/216 (41%), Gaps = 17/216 (7%)
Query: 7   KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEA 66
           +    V + G NGFIG  L + LL  ++  +      GSD+   F        +    E 
Sbjct: 313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDI-GSDAISRFL----NHPHFHFVEG 367
Query: 67  DV-LDSGAVSRAVEGCKGVFHVASPCT-LEDPVDPEKELILPAVQGTLNVLEAAKRFGVR 124
           D+ + S  +   V+ C  V  + +  T +E   +P +   L   +  L ++    ++  R
Sbjct: 368 DISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELD-FEENLRIIRYCVKY--R 424
Query: 125 RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW-YPVSKTLAEKAAWEFAEKHG 183
           + ++  S S +        K FDE     +    ++ +W Y VSK L ++  W + EK G
Sbjct: 425 KRIIFPSTSEVYGM--CSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEG 482
Query: 184 VDVVAIHPATCLGP----LMQPYLNASCAVLQQLLQ 215
           +      P   +GP    L    + +S A+ Q +L 
Sbjct: 483 LQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILN 518

>pdb|2BLL|A Chain A, Apo-Structure Of The C-Terminal Decarboxylase Domain Of Arna Length = 345

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/211 (23%), Positives = 88/211 (41%), Gaps = 17/211 (8%)
Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADV-LD 70
           V + G NGFIG  L + LL  ++  +      GSD+   F        +    E D+ + 
Sbjct: 3   VLILGVNGFIGNHLTERLLREDHYEVYGLDI-GSDAISRFL----NHPHFHFVEGDISIH 57
Query: 71  SGAVSRAVEGCKGVFHVASPCT-LEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVT 129
           S  +   V+ C  V  + +  T +E   +P +   L   +  L ++    ++  R+ ++ 
Sbjct: 58  SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFEL-DFEENLRIIRYCVKY--RKRIIF 114
Query: 130 SSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW-YPVSKTLAEKAAWEFAEKHGVDVVA 188
            S S +        K FDE     +    ++ +W Y VSK L ++  W + EK G+    
Sbjct: 115 PSTSEVYGM--CSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTL 172
Query: 189 IHPATCLGP----LMQPYLNASCAVLQQLLQ 215
             P   +GP    L    + +S A+ Q +L 
Sbjct: 173 FRPFNWMGPRLDNLNAARIGSSRAITQLILN 203

>pdb|1Z73|A Chain A, Crystal Structure Of E. Coli Arna Dehydrogenase (decarboxylase) Domain, S433a Mutant Length = 358

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 49/216 (22%), Positives = 89/216 (41%), Gaps = 17/216 (7%)
Query: 7   KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEA 66
           +    V + G NGFIG  L + LL  ++  +      GSD+   F        +    E 
Sbjct: 11  RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDI-GSDAISRFL----NHPHFHFVEG 65
Query: 67  DV-LDSGAVSRAVEGCKGVFHVASPCT-LEDPVDPEKELILPAVQGTLNVLEAAKRFGVR 124
           D+ + S  +   V+ C  V  + +  T +E   +P +   L   +  L ++    ++  R
Sbjct: 66  DISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFEL-DFEENLRIIRYCVKY--R 122
Query: 125 RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW-YPVSKTLAEKAAWEFAEKHG 183
           + ++  S + +        K FDE     +    ++ +W Y VSK L ++  W + EK G
Sbjct: 123 KRIIFPSTAEVYGM--CSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEG 180
Query: 184 VDVVAIHPATCLGP----LMQPYLNASCAVLQQLLQ 215
           +      P   +GP    L    + +S A+ Q +L 
Sbjct: 181 LQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILN 216

>pdb|3RFT|A Chain A, Crystal Structure Of Uronate Dehydrogenase From Agrobacterium Tumefaciens Length = 267

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 12/135 (8%)
Query: 60  NLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAK 119
           N    + D+ D+ AV+  V GC G+ H+    ++E P +   +++   + G  N+ EAA+
Sbjct: 44  NEECVQCDLADANAVNAMVAGCDGIVHLGG-ISVEKPFE---QILQGNIIGLYNLYEAAR 99
Query: 120 RFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFA 179
             G  R+V  SS   I          + +T     +        Y VSK   E  A  + 
Sbjct: 100 AHGQPRIVFASSNHTI--------GYYPQTERLGPDVPARPDGLYGVSKCFGENLARMYF 151
Query: 180 EKHGVDVVAIHPATC 194
           +K G +   +   +C
Sbjct: 152 DKFGQETALVRIGSC 166

>pdb|1G1A|A Chain A, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase (Rmlb)from Salmonella Enterica Serovar Typhimurium Length = 361

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/116 (25%), Positives = 58/116 (50%), Gaps = 10/116 (8%)
Query: 12  VCVTGANGFIGTWLVKTLLDNNY---TSINATVFPGSDSSHLFALPGAGDANLRVFE-AD 67
           + +TG  GFIG+ +V+ ++ N      +I+   + G+    L +L    ++N   FE AD
Sbjct: 3   ILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGN----LESLSDISESNRYNFEHAD 58
Query: 68  VLDSGAVSRAVEGCK--GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF 121
           + DS  ++R  E  +   V H+A+   ++  +      I   + GT  +LE A+++
Sbjct: 59  ICDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKY 114

>pdb|3EHE|A Chain A, Crystal Structure Of Udp-Glucose 4 Epimerase (Gale-1) From Archaeoglobus Fulgidus Length = 313

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 14/133 (10%)
Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           + VTG  GFIG+ +V  L ++N   +   +  G++    F    A     R+ +AD L +
Sbjct: 4   IVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEE---FVNEAA-----RLVKAD-LAA 54
Query: 72  GAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS 131
             +   ++G + V+H+A+   +    +   E+    V  T  +LEA ++ GV R+V TS+
Sbjct: 55  DDIKDYLKGAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTST 114
Query: 132 ISA-----IVPNP 139
            +      ++P P
Sbjct: 115 STVYGEAKVIPTP 127

>pdb|1Z45|A Chain A, Crystal Structure Of The Gal10 Fusion Protein Galactose MutarotaseUDP-Galactose 4-Epimerase From Saccharomyces Cerevisiae Complexed With Nad, Udp-Glucose, And Galactose Length = 699

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 53/258 (20%), Positives = 97/258 (37%), Gaps = 44/258 (17%)
Query: 4   EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRV 63
           ++E   + V VTG  G+IG+  V  L++N Y  + A     S    +  L      ++  
Sbjct: 6   QSESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPF 65
Query: 64  FEADVLDSGAVSRAVEGCK--GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF 121
           +E D+ D   + +  +  K   V H A    + +            + GT+ +LE  +++
Sbjct: 66  YEVDLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQY 125
Query: 122 GVRRVVVTSSISA---------IVP----------NPGWKGKVFDETSWTDLEYCKSRKK 162
            V + V +SS +          ++P          NP    K   E    DL        
Sbjct: 126 NVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYN------ 179
Query: 163 WYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLG--PLMQPYLNASCAVLQQLLQGSKDT 220
                   ++K +W+FA     + +  HP+  +G  PL  P  N     + Q+  G ++ 
Sbjct: 180 --------SDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIP--NNLLPYMAQVAVGRREK 229
Query: 221 -----QEYHWLGAVPVKD 233
                 +Y      P++D
Sbjct: 230 LYIFGDDYDSRDGTPIRD 247

>pdb|2PZK|A Chain A, Crystal Structure Of The Bordetella Bronchiseptica Enzyme Wbmg In Complex With Nad Length = 330

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 58/124 (46%), Gaps = 22/124 (17%)
Query: 12  VCVTGANGFIGTWLVK--------TLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRV 63
           + +TG  G +G+ L++         L+ +N+ +    V P          P AG   L V
Sbjct: 23  ILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLP----------PVAG---LSV 69
Query: 64  FEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV 123
            E  V D+G + RA +  K    V S    +DP D   E     VQG++NV +AA + GV
Sbjct: 70  IEGSVTDAGLLERAFDSFKPTHVVHSAAAYKDP-DDWAEDAATNVQGSINVAKAASKAGV 128
Query: 124 RRVV 127
           +R++
Sbjct: 129 KRLL 132

>pdb|3AW9|A Chain A, Structure Of Udp-Galactose 4-Epimerase Mutant Length = 308

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 84/205 (40%), Gaps = 54/205 (26%)
Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           + VTG  GFIG+ LV  L++  Y  +   +    D+         G A L V +      
Sbjct: 3   IVVTGGAGFIGSHLVDKLVELGYEVVVVDIVQ-RDT--------GGSAELHVRDLKDYSW 53
Query: 72  GAVSRAVEGCKG--VFHVAS----PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRR 125
           GA      G KG  VFH A+      +  +P+    E ++     T NVLE A++ GVR 
Sbjct: 54  GA------GIKGDVVFHFAANPEVRLSTTEPIVHFNENVV----ATFNVLEWARQTGVRT 103
Query: 126 VVVTSSISA-----IVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWE--- 177
           VV  SS +      ++P P                     + + P+S   A KAA E   
Sbjct: 104 VVFASSSTVYGDADVIPTP-------------------EEEPYKPISVYGAAKAAGEVMC 144
Query: 178 --FAEKHGVDVVAIHPATCLGPLMQ 200
             +A   GV  +A+  A  +GP ++
Sbjct: 145 ATYARLFGVRCLAVRYANVVGPRLR 169

>pdb|3ICP|A Chain A, Crystal Structure Of Udp-Galactose 4-Epimerase Length = 312

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 84/205 (40%), Gaps = 50/205 (24%)
Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           + VTG  GFIG+ LV  L++  Y  +   V   S     F  P    A L V +      
Sbjct: 3   IVVTGGAGFIGSHLVDKLVELGYEVV--VVDNLSSGRREFVNP---SAELHVRDLKDYSW 57
Query: 72  GAVSRAVEGCKG--VFHVAS----PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRR 125
           GA      G KG  VFH A+      +  +P+    E ++     T NVLE A++ GVR 
Sbjct: 58  GA------GIKGDVVFHFAANPEVRLSTTEPIVHFNENVV----ATFNVLEWARQTGVRT 107
Query: 126 VVVTSSISA-----IVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWE--- 177
           VV  SS +      ++P P                     + + P+S   A KAA E   
Sbjct: 108 VVFASSSTVYGDADVIPTP-------------------EEEPYKPISVYGAAKAAGEVMC 148
Query: 178 --FAEKHGVDVVAIHPATCLGPLMQ 200
             +A   GV  +A+  A  +GP ++
Sbjct: 149 ATYARLFGVRCLAVRYANVVGPRLR 173

>pdb|1KEP|A Chain A, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase (Rmlb) From Streptococcus Suis With Dtdp-Xylose Bound Length = 348

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/133 (23%), Positives = 60/133 (45%), Gaps = 9/133 (6%)
Query: 10  ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFP----GSDSSHLFALPGAGDANLRVFE 65
           + + VTG  GFIG+  V  +  NN+  ++ TV        + ++L A+ G     + +  
Sbjct: 5   KNIIVTGGAGFIGSNFVHYVY-NNHPDVHVTVLDKLTYAGNKANLEAILGD---RVELVV 60
Query: 66  ADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR- 124
            D+ D+  V +       + H A+    ++ ++     I     GT  +LEAA+++ +R 
Sbjct: 61  GDIADAELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRF 120
Query: 125 RVVVTSSISAIVP 137
             V T  +   +P
Sbjct: 121 HHVSTDEVYGDLP 133

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	278
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	1e-123
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	1e-122
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	1e-122
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	6e-98
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	9e-66
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	1e-58
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	7e-31
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	4e-30
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	2e-28
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	2e-22
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	1e-21
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	1e-21
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	3e-21
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	2e-20
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	3e-20
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	3e-20
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	4e-20
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	2e-19
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	3e-19
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	2e-18
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	2e-18
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	4e-18
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	6e-18
1xq6_A	253	Unknown protein; structural genomics, protein stru	1e-17
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	4e-17
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	2e-16
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	3e-16
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	4e-16
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	5e-16
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	6e-16
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	9e-16
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	1e-15
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	5e-15
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	9e-14
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	9e-14
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	3e-13
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	5e-13
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	1e-12
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	3e-11
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	3e-11
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	4e-11
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	2e-10
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	3e-10
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	4e-09
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	4e-09
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	4e-09
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	1e-08
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	3e-08
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	7e-08
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	1e-07
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	2e-07
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	2e-07
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	3e-07
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	5e-07
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	6e-07
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	6e-07
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	2e-06
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	2e-06
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	6e-06
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	7e-06
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	8e-06
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	1e-05
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	2e-05
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	5e-05
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	7e-05
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	1e-04
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	1e-04
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	1e-04
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	2e-04
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	2e-04
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	5e-04
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	7e-04

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A Length = 338

 Score =  355 bits (913), Expect = e-123
 Identities = 102/292 (34%), Positives = 158/292 (54%), Gaps = 20/292 (6%)

Query: 1   MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS---SHLFALPGAG 57
           MA++    ++T CV G  GF+ + LVK LL   Y  +N TV    +    SHL  L   G
Sbjct: 1   MATQHPIGKKTACVVGGTGFVASLLVKLLLQKGYA-VNTTVRDPDNQKKVSHLLELQELG 59

Query: 58  DANLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEA 117
             +L++F AD+ D  +    + GC  VFHVA+P       DPE ++I PA+QG +NV++A
Sbjct: 60  --DLKIFRADLTDELSFEAPIAGCDFVFHVATPVHFASE-DPENDMIKPAIQGVVNVMKA 116

Query: 118 AKRF-GVRRVVVTSSISAIVPNPGWK-GKVFDETSWTDLEYCKSRKK---WYPVSKTLAE 172
             R   V+RV++TSS +A+  N     G V DE +WTD+E+  S K     YP SKTLAE
Sbjct: 117 CTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGYPASKTLAE 176

Query: 173 KAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH-------- 224
           KAAW+FAE++ +D++ + P    G  +   + +S  +   L+ G++              
Sbjct: 177 KAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSG 236

Query: 225 WLGAVPVKDVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPV 276
            +    V+DV +A + + E  +ASGRY+C        + A+ +SK +P++ V
Sbjct: 237 SVSIAHVEDVCRAHIFVAEKESASGRYICCAANTSVPELAKFLSKRYPQYKV 288

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337

 Score =  351 bits (902), Expect = e-122
 Identities = 104/284 (36%), Positives = 166/284 (58%), Gaps = 16/284 (5%)

Query: 1   MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS---SHLFALPGAG 57
           M S++E    TVCVTGA+GFIG+WLV  LL+  YT + ATV   ++     HL  LP A 
Sbjct: 1   MGSQSE----TVCVTGASGFIGSWLVMRLLERGYT-VRATVRDPTNVKKVKHLLDLPKAE 55

Query: 58  DANLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEA 117
             +L +++AD+ D G+   A++GC GVFHVA+P   E   DPE E+I P ++G L ++++
Sbjct: 56  T-HLTLWKADLADEGSFDEAIKGCTGVFHVATPMDFESK-DPENEVIKPTIEGMLGIMKS 113

Query: 118 AKRFG-VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK---WYPVSKTLAEK 173
                 VRR+V TSS   +      +  V+DE+ W+D+E+C+++K     Y VSKTLAE+
Sbjct: 114 CAAAKTVRRLVFTSSAGTVNIQEH-QLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQ 172

Query: 174 AAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA-VPVK 232
           AAW++A+++ +D + I P   +GP +   +  S       + G++        G  V + 
Sbjct: 173 AAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLD 232

Query: 233 DVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPV 276
           D+  A + LFE+P A GRY+C++      D A+ + + +PE+ +
Sbjct: 233 DLCNAHIYLFENPKAEGRYICSSHDCIILDLAKMLREKYPEYNI 276

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322

 Score =  349 bits (899), Expect = e-122
 Identities = 98/275 (35%), Positives = 148/275 (53%), Gaps = 12/275 (4%)

Query: 10  ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS----SHLFALPGAGDANLRVFE 65
             VCVTG  GF+G+W++K+LL+N Y+ +N T+    +     S L  LPGA +  L  F 
Sbjct: 2   GRVCVTGGTGFLGSWIIKSLLENGYS-VNTTIRADPERKRDVSFLTNLPGASE-KLHFFN 59

Query: 66  ADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VR 124
           AD+ +  + + A+EGC G+FH ASP       +PE+ +    V G L +L+A      V+
Sbjct: 60  ADLSNPDSFAAAIEGCVGIFHTASPIDFAVS-EPEEIVTKRTVDGALGILKACVNSKTVK 118

Query: 125 RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW---YPVSKTLAEKAAWEFAEK 181
           R + TSS SA+  N      V DE+ W+D++  +S K +   Y VSKTLAEKA  EF E+
Sbjct: 119 RFIYTSSGSAVSFNG-KDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQ 177

Query: 182 HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLL 241
           +G+DVV +     +G  + P L  S      L+ G K+         V V DVA+A + L
Sbjct: 178 NGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVTRFHMVHVDDVARAHIYL 237

Query: 242 FESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPV 276
            E+    GRY C+  I    + ++ +S  +PE+ +
Sbjct: 238 LENSVPGGRYNCSPFIVPIEEMSQLLSAKYPEYQI 272

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342

 Score =  289 bits (743), Expect = 6e-98
 Identities = 75/298 (25%), Positives = 117/298 (39%), Gaps = 27/298 (9%)

Query: 1   MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS---SHLFALPGAG 57
           + +    E   V VTGANGF+ + +V+ LL++ Y  +  T    S        +     G
Sbjct: 3   IDNAVLPEGSLVLVTGANGFVASHVVEQLLEHGYK-VRGTARSASKLANLQKRWDAKYPG 61

Query: 58  DANLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEA 117
                    D+L  GA    ++G  GV H+AS  +     +   E++ PA+ GTLN L A
Sbjct: 62  R-FETAVVEDMLKQGAYDEVIKGAAGVAHIASVVSFS---NKYDEVVTPAIGGTLNALRA 117

Query: 118 AKRFG-VRRVVVTSSISAIV-PNPGWKGKVFDETSWTDLEYCKSRKK----------WYP 165
           A     V+R V+TSS  + + P P  +G   DE SW      K++             Y 
Sbjct: 118 AAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYA 177

Query: 166 VSKTLAEKAAWEFAEKHGV--DVVAIHPATCLGPLMQPY--LNASCAVLQQLLQGSKDTQ 221
            SKT AE AAW+F +++     + A+ P   +G +  P     ++   +  L  G     
Sbjct: 178 ASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPA 237

Query: 222 EYHWLGA--VPVKDVAKAQVLLFESPAASG-RYLCTNGIYQFGDFAERVSKLFPEFPV 276
                    V   D+    +     P     R   T G + +        KL+P    
Sbjct: 238 LALMPPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKTF 295

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score =  207 bits (530), Expect = 9e-66
 Identities = 55/260 (21%), Positives = 92/260 (35%), Gaps = 16/260 (6%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
             V GA G +G    + +    +  +     P S    L  L            A++LD 
Sbjct: 16  YAVLGATGLLGHHAARAIRAAGHD-LVLIHRPSSQIQRLAYLE------PECRVAEMLDH 68

Query: 72  GAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS 131
             + RA+ G  GV   A       P   + E +  A+  T     A  +  V R++   S
Sbjct: 69  AGLERALRGLDGVIFSAGYYPS-RPRRWQ-EEVASALGQTNPFYAACLQARVPRILYVGS 126

Query: 132 ISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHP 191
             A+  +P  +G    E  + D     S K  Y + K   ++ A E A ++G+ VV   P
Sbjct: 127 AYAMPRHP--QGLPGHEGLFYD--SLPSGKSSYVLCKWALDEQAREQA-RNGLPVVIGIP 181

Query: 192 ATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGRY 251
              LG L       +  V+  +  G            +   +  +  ++  E      RY
Sbjct: 182 GMVLGEL--DIGPTTGRVITAIGNGEMTHYVAGQRNVIDAAEAGRGLLMALERGRIGERY 239

Query: 252 LCTNGIYQFGDFAERVSKLF 271
           L T    +  D   R+++L 
Sbjct: 240 LLTGHNLEMADLTRRIAELL 259

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score =  186 bits (473), Expect = 1e-58
 Identities = 42/245 (17%), Positives = 88/245 (35%), Gaps = 36/245 (14%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            + + GA+GF+G+ L+   L+  +  + A V           +    + +L+V +ADV  
Sbjct: 6   KIVLIGASGFVGSALLNEALNRGFE-VTAVVRHPEK------IKIENE-HLKVKKADVSS 57

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
              V    +G   V    +P           ++    ++  L +++  K+ GV R ++  
Sbjct: 58  LDEVCEVCKGADAVISAFNP------GWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVG 111

Query: 131 SISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIH 190
              ++   PG +           ++  +  +   P  K L E       ++  +D V   
Sbjct: 112 GAGSLFIAPGLRL----------MDSGEVPENILPGVKALGEFYLNFLMKEKEIDWVFFS 161

Query: 191 PATCLGPLMQP--YLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAAS 248
           PA  + P ++   Y      ++  ++  S           + V+D A A +   E P   
Sbjct: 162 PAADMRPGVRTGRYRLGKDDMIVDIVGNSH----------ISVEDYAAAMIDELEHPKHH 211

Query: 249 GRYLC 253
                
Sbjct: 212 QERFT 216

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267

 Score =  115 bits (289), Expect = 7e-31
 Identities = 41/191 (21%), Positives = 68/191 (35%), Gaps = 28/191 (14%)

Query: 10  ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVL 69
             + VTGA G +G+ +   L    +    + +             GA +A+  +   D+ 
Sbjct: 3   NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVD----------LGAAEAHEEIVACDLA 52

Query: 70  DSGAVSRAVEGCKGVFHVA---SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRV 126
           D+ AV   V+ C G+ H+          D +          + G  N+ EAA+  G  R+
Sbjct: 53  DAQAVHDLVKDCDGIIHLGGVSVERPWNDILQAN-------IIGAYNLYEAARNLGKPRI 105

Query: 127 VVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDV 186
           V  SS   I   P  +    D           S    Y +SK   E  A  +  K  ++ 
Sbjct: 106 VFASSNHTIGYYP--RTTRIDTEVPRR---PDSL---YGLSKCFGEDLASLYYHKFDIET 157

Query: 187 VAIHPATCLGP 197
           + I   +C   
Sbjct: 158 LNIRIGSCFPK 168

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267

 Score =  113 bits (284), Expect = 4e-30
 Identities = 46/188 (24%), Positives = 70/188 (37%), Gaps = 24/188 (12%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            + VTGA G +G  + + L                  + L  L  AG  N    + D+ D
Sbjct: 5   RLLVTGAAGQLGRVMRERLAPMAEILRL---------ADLSPLDPAGP-NEECVQCDLAD 54

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPA-VQGTLNVLEAAKRFGVRRVVVT 129
           + AV+  V GC G+ H+         V+   E IL   + G  N+ EAA+  G  R+V  
Sbjct: 55  ANAVNAMVAGCDGIVHLGG-----ISVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFA 109

Query: 130 SSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAI 189
           SS   I   P  + +          +        Y VSK   E  A  + +K G +   +
Sbjct: 110 SSNHTIGYYP--QTERLGPDVPARPDGL------YGVSKCFGENLARMYFDKFGQETALV 161

Query: 190 HPATCLGP 197
              +C   
Sbjct: 162 RIGSCTPE 169

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317

 Score =  110 bits (276), Expect = 2e-28
 Identities = 61/282 (21%), Positives = 104/282 (36%), Gaps = 41/282 (14%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           + VTG++G IGT LV  L +            G  +     +       ++    DV + 
Sbjct: 2   ILVTGSSGQIGTELVPYLAEKY----------GKKNVIASDIVQRDTGGIKFITLDVSNR 51

Query: 72  GAVSRAVE--GCKGVFHVA---SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRV 126
             + RAVE      +FH+A   S    +DP    K  +     GT N+LEAAK+  V +V
Sbjct: 52  DEIDRAVEKYSIDAIFHLAGILSAKGEKDPALAYKVNM----NGTYNILEAAKQHRVEKV 107

Query: 127 VVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDV 186
           V+ S+I    P            + T           + V+K  AE     + EK G+DV
Sbjct: 108 VIPSTIGVFGPET--PKNKVPSITITRPRT------MFGVTKIAAELLGQYYYEKFGLDV 159

Query: 187 VAIHPATCLGPLMQPYLNASC---AVLQQLLQGSK-----DTQEYHWLGAVPVKDVAKAQ 238
            ++     +    +P    +     +    ++  K            +  + + D  KA 
Sbjct: 160 RSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPM--MYMPDALKAL 217

Query: 239 VLLFESPAASGR----YLCTNGIYQFGDFAERVSKLFPEFPV 276
           V L+E+          Y  T   +   +   ++ +  PEF +
Sbjct: 218 VDLYEADRDKLVLRNGYNVTAYTFTPSELYSKIKERIPEFEI 259

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352

 Score = 93.9 bits (234), Expect = 2e-22
 Identities = 53/273 (19%), Positives = 101/273 (36%), Gaps = 51/273 (18%)

Query: 1   MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSI---N-ATVFPGSDSSHLFALPGA 56
           +  E   + +   +TG  GFIG+ L++TLL  +   +   N AT    +       +   
Sbjct: 19  LRKELPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEK 78

Query: 57  GDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS----PCTLEDPVDPEKELILPAVQGTL 112
             +N +  + D+ +    + A  G   V H A+    P ++ DP+      I     G L
Sbjct: 79  QWSNFKFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNID----GFL 134

Query: 113 NVLEAAKRFGVRRVVVTSSISAI------VPNPGWKGKVFDETSWTDLEYCKSRKKWYPV 166
           N+L AA+   V+     +S S+       +P          E +        S    Y V
Sbjct: 135 NMLIAARDAKVQSFTYAAS-SSTYGDHPGLP--------KVEDTIGK---PLSP---YAV 179

Query: 167 SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVL----QQLLQGS----- 217
           +K + E  A  F+  +G   + +      G    P   A  AV+      ++QG      
Sbjct: 180 TKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNG-AYAAVIPKWTSSMIQGDDVYIN 238

Query: 218 ---KDTQEYHWLGAVPVKDVAKAQVLLFESPAA 247
              + ++++       +++  +A +L   +   
Sbjct: 239 GDGETSRDF-----CYIENTVQANLLAATAGLD 266

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377

 Score = 92.0 bits (229), Expect = 1e-21
 Identities = 58/292 (19%), Positives = 106/292 (36%), Gaps = 54/292 (18%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD---SSHLFALPGAGDANLRVFEAD 67
            V V G  GF+G+ LVK LL+     +   V    D   S+    +P      +R  E  
Sbjct: 34  NVMVVGGAGFVGSNLVKRLLELGVNQV--HVV---DNLLSAEKINVPD--HPAVRFSETS 86

Query: 68  VLDSGAVSRAVEGCKGVFHVAS----PCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-G 122
           + D   ++   +    VFH+A+      ++ DP+   +   L     TL + E  K F  
Sbjct: 87  ITDDALLASLQDEYDYVFHLATYHGNQSSIHDPLADHENNTL----TTLKLYERLKHFKR 142

Query: 123 VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH 182
           +++VV +++  +I        K  +ET    L    S    Y +SK   E  +  + ++H
Sbjct: 143 LKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDS---PYSMSKIFGEFYSVYYHKQH 199

Query: 183 GVDVVAIHPATCLGPLMQPYLNASC--------AV----LQQLLQG-----------SKD 219
            +  V        GP                   V    + + L+G           ++D
Sbjct: 200 QLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRD 259

Query: 220 TQEYHWLGAVPVKDVAKAQVLLFESPAASGRY-LCTNGIYQFGDFAERVSKL 270
                +   + V+DVA   +         G Y + +       D A +++++
Sbjct: 260 -----F---IFVEDVANGLIACAADGTPGGVYNIASGKETSIADLATKINEI 303

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311

 Score = 91.1 bits (227), Expect = 1e-21
 Identities = 43/276 (15%), Positives = 94/276 (34%), Gaps = 53/276 (19%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           + VTG  GF+G ++V+++ ++  T I          S    +      +     +D    
Sbjct: 5   IAVTGGTGFLGQYVVESIKNDGNTPI------ILTRS----IGNKAINDYEYRVSDYTLE 54

Query: 72  GAVSRAVEGCKGVFHVASPCTLEDPV-DPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
             +   +     V H+A+    +  + +            T N+ +A     +  +V  S
Sbjct: 55  DLI-NQLNDVDAVVHLAATRGSQGKISEFHDN-----EILTQNLYDACYENNISNIVYAS 108

Query: 131 SISA-----IVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVD 185
           +ISA      +P        ++E      +        Y VSK   E     ++ K G+ 
Sbjct: 109 TISAYSDETSLP--------WNEKELPLPDLM------YGVSKLACEHIGNIYSRKKGLC 154

Query: 186 VVAIHPATCLGPLMQPYLNASCAV---LQQLLQGSK-----D-TQEYHWLGAVPVKDVAK 236
           +  +  A   G   +     +  +    +Q   G +     +   +  +   +  KD AK
Sbjct: 155 IKNLRFAHLYGFNEKN----NYMINRFFRQAFHGEQLTLHANSVAKREF---LYAKDAAK 207

Query: 237 AQVLLFESPAASGRY-LCTNGIYQFGDFAERVSKLF 271
           + +   +    SG + + +       + A  ++  F
Sbjct: 208 SVIYALKQEKVSGTFNIGSGDALTNYEVANTINNAF 243

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364

 Score = 90.6 bits (224), Expect = 3e-21
 Identities = 35/257 (13%), Positives = 67/257 (26%), Gaps = 16/257 (6%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
              + G  G IG  L + L   +       V+  +  +         D  +   + D+ D
Sbjct: 3   VALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWHE---DNPINYVQCDISD 59

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
                  +     V HV            E+E      +   NVL+A          ++ 
Sbjct: 60  PDDSQAKLSPLTDVTHVFYVTWA--NRSTEQENCEANSKMFRNVLDAVIPNCPNLKHISL 117

Query: 131 SISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIH 190
                     ++     E+          R K+      L +    E  +K G+      
Sbjct: 118 QTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFYYDLEDIMLEEVEKKEGLTWSVHR 177

Query: 191 PATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG----------AVPVKDVAKAQVL 240
           P    G      +N    +         + +   + G                +A+  + 
Sbjct: 178 PGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHHIW 237

Query: 241 LFESPAASGR-YLCTNG 256
               P A    +  +NG
Sbjct: 238 AAVDPYAKNEAFNVSNG 254

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379

 Score = 88.6 bits (220), Expect = 2e-20
 Identities = 34/203 (16%), Positives = 67/203 (33%), Gaps = 18/203 (8%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           + +TGA GFI + + + L    +  I +        +           +LRV E      
Sbjct: 32  ISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVME------ 85

Query: 72  GAVSRAVEGCKGVFHVASPC-----TLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRV 126
               +  EG   VF++A+          +       ++      + N++EAA+  G++R 
Sbjct: 86  -NCLKVTEGVDHVFNLAADMGGMGFIQSNHS----VIMYNNTMISFNMIEAARINGIKRF 140

Query: 127 VVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDV 186
              SS + I P              +D  +    +  + + K   E+    + +  G++ 
Sbjct: 141 FYASS-ACIYPEFKQLETTNVSLKESDA-WPAEPQDAFGLEKLATEELCKHYNKDFGIEC 198

Query: 187 VAIHPATCLGPLMQPYLNASCAV 209
                    GP          A 
Sbjct: 199 RIGRFHNIYGPFGTWKGGREKAP 221

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333

 Score = 87.7 bits (218), Expect = 3e-20
 Identities = 59/268 (22%), Positives = 91/268 (33%), Gaps = 61/268 (22%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD---SSHLFALPGAGDANLRVFEAD 67
            V +TG  G IG+ + + LL+     +      G D   +     L      NL   E  
Sbjct: 23  KVFITGICGQIGSHIAELLLERGDKVV------GIDNFATGRREHLKD--HPNLTFVEGS 74

Query: 68  VLDSGAVSRAVEGCK--GVFHVASPCTLEDPVDPEKELILPA---VQGTLNVLEAAKRFG 122
           + D   V++ +   +   V H A   + +DP D              G  NV++AAK+  
Sbjct: 75  IADHALVNQLIGDLQPDAVVHTA--ASYKDPDDW----YNDTLTNCVGGSNVVQAAKKNN 128

Query: 123 VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH 182
           V R V   +       P    +        +     S    Y +SK+  E     + E  
Sbjct: 129 VGRFVYFQTALCYGVKP--IQQPVRLDHPRN--PANSS---YAISKSANED----YLEYS 177

Query: 183 GVDVVAIHPATCLGPLMQPYLNASCAVL----QQLLQGSKDTQEYHWLGA-----VPVKD 233
           G+D V    A  +GP            L    Q+L +G K       +       V VKD
Sbjct: 178 GLDFVTFRLANVVGPRNVS------GPLPIFFQRLSEGKKCF-----VTKARRDFVFVKD 226

Query: 234 VAKAQVLLFESPAASGRYLCTNGIYQFG 261
           +A+A V   +           +G Y F 
Sbjct: 227 LARATVRAVDGVG--------HGAYHFS 246

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321

 Score = 87.2 bits (217), Expect = 3e-20
 Identities = 54/288 (18%), Positives = 82/288 (28%), Gaps = 66/288 (22%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSI---NATVFPGSDSSHLFALPGAGDANLRVFEAD 67
            + +TG  GFIG  L + L+ +        +  V P                  +  E  
Sbjct: 9   RILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGT----------GKFLEKP 58

Query: 68  VLDSGAVSRAVEGCKGVFHVAS----PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV 123
           VL+     R +   + V+H+AS    P + + P+D         V    ++L      GV
Sbjct: 59  VLE--LEERDLSDVRLVYHLASHKSVPRSFKQPLDYLD-----NVDSGRHLLALCTSVGV 111

Query: 124 RRVVVTSSISAI------VPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWE 177
            +VVV S+   +      +P          E S             Y  SK   E  A  
Sbjct: 112 PKVVVGST-CEVYGQADTLP--------TPEDSPLSPRSP------YAASKVGLEMVAGA 156

Query: 178 FAEKHGVDVVAI-HPATCLGPLMQPYLNASCAV---LQQLLQGSKDTQEYHWLGA----- 228
                    V I       GP  +P  +A   V      LL  ++        G      
Sbjct: 157 HQRASVAPEVGIVRFFNVYGPGERP--DA--LVPRLCANLLTRNELPV----EGDGEQRR 208

Query: 229 --VPVKDVAKAQVLLFESPAASGRY-LCTNGIYQFGDFAERVSKLFPE 273
               + DV    V L   P         +       D    +    P 
Sbjct: 209 DFTYITDVVDKLVALANRP-LPSVVNFGSGQSLSVNDVIRILQATSPA 255

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313

 Score = 86.8 bits (216), Expect = 4e-20
 Identities = 48/262 (18%), Positives = 88/262 (33%), Gaps = 58/262 (22%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD---SSHLFALPGAGDANLRVFEAD 67
            + VTG  GFIG+ +V  L ++N       V    D   S +   +        R+ +AD
Sbjct: 3   LIVVTGGAGFIGSHVVDKLSESN----EIVVI---DNLSSGNEEFVN----EAARLVKAD 51

Query: 68  VLDSGAVSRAVEGCKGVFHVAS----PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV 123
           +     +   ++G + V+H+A+        E+P +  +      V  T  +LEA ++ GV
Sbjct: 52  LAAD-DIKDYLKGAEEVWHIAANPDVRIGAENPDEIYRN----NVLATYRLLEAMRKAGV 106

Query: 124 RRVVVTSSISAI------VPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWE 177
            R+V TS+ S +      +P P        E   T           Y  SK   E     
Sbjct: 107 SRIVFTST-STVYGEAKVIPTP--------EDYPTHPISL------YGASKLACEALIES 151

Query: 178 FAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSK-----D-TQE--YHWLGAV 229
           +     +       A  +G     +      +++      +     +  Q   Y     +
Sbjct: 152 YCHTFDMQAWIYRFANVIGR-RSTHGVIYDFIMKLKRNPEELEILGNGEQNKSY-----I 205

Query: 230 PVKDVAKAQVLLFESPAASGRY 251
            + D   A +           +
Sbjct: 206 YISDCVDAMLFGLRGDERVNIF 227

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342

 Score = 85.5 bits (212), Expect = 2e-19
 Identities = 54/297 (18%), Positives = 95/297 (31%), Gaps = 56/297 (18%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINAT--------VFPGSDSSHLFALPGAGDANLR 62
            + + GA G +G  L + L+ +                  P +        P      + 
Sbjct: 16  HIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEA--------PAGFSGAVD 67

Query: 63  VFEADVLDSGAVSRAVE-GCKGVFHVASPCTLEDPVDPEKELILPA----VQGTLNVLEA 117
              AD+   G   + VE     +FH+A+  + E  +D +K          + GT  + +A
Sbjct: 68  ARAADLSAPGEAEKLVEARPDVIFHLAAIVSGEAELDFDK-----GYRINLDGTRYLFDA 122

Query: 118 AKRFGVR-----RVVVTSSISAI-VPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLA 171
            +    +     RVV TSSI+    P P        +   T      +    Y   K + 
Sbjct: 123 IRIANGKDGYKPRVVFTSSIAVFGAPLP----YPIPDEFHTT---PLTS---YGTQKAIC 172

Query: 172 EKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNAS---CAVLQQLLQGSK-----DTQEY 223
           E    +++ +   D + I   T      +P   AS     +L++ L G +          
Sbjct: 173 ELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIR 232

Query: 224 HWLGAVPVKDVAKAQVLLFESPAA---SGRYLCTNGI-YQFGDFAERVSKLFPEFPV 276
           HW      +      +             R L   G+    G+  E + K+  E  V
Sbjct: 233 HWH--ASPRSAVGFLIHGAMIDVEKVGPRRNLSMPGLSATVGEQIEALRKVAGEKAV 287

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A Length = 345

 Score = 85.1 bits (211), Expect = 3e-19
 Identities = 55/304 (18%), Positives = 99/304 (32%), Gaps = 68/304 (22%)

Query: 12  VCVTGANGFIGTWLVKTLL----------DNNYTSINATVFPGSDSSHLFALPGAGDANL 61
           V + G NGFIG  L + LL          D    +I          S     P     + 
Sbjct: 3   VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAI----------SRFLNHP-----HF 47

Query: 62  RVFEADV-LDSGAVSRAVEGCKGVFHVASPCT----LEDPVDPEKELILPAVQGTLNVLE 116
              E D+ + S  +   V+ C  V  + +  T      +P+     +     +  L ++ 
Sbjct: 48  HFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPL----RVFELDFEENLRIIR 103

Query: 117 AAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW-YPVSKTLAEKAA 175
              ++  R  ++  S S +        K FDE     +    ++ +W Y VSK L ++  
Sbjct: 104 YCVKYRKR--IIFPSTSEVYGMC--SDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 159

Query: 176 WEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAV-------LQQLLQGSKDT------QE 222
           W + EK G+      P   +GP +     A           +  L++GS         Q+
Sbjct: 160 WAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQK 219

Query: 223 ----YHWLGAVPVKDVAKAQVLLFESPAASGRYLCTN-----GIYQFGDFAERVSKLFPE 273
                       ++D  +A   + E+          N           +  E +   F +
Sbjct: 220 RCFTD-------IRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEK 272

Query: 274 FPVH 277
            P+ 
Sbjct: 273 HPLR 276

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score = 80.4 bits (199), Expect = 2e-18
 Identities = 40/249 (16%), Positives = 71/249 (28%), Gaps = 47/249 (18%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            + + GA G  G   +   +   Y  +   V    DSS L +          V   DVL 
Sbjct: 5   KIAIFGATGQTGLTTLAQAVQAGYE-VTVLV---RDSSRLPSEGPRP---AHVVVGDVLQ 57

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
           +  V + V G   V  +       + + P   +     +G  N++ A K  GV +VV  +
Sbjct: 58  AADVDKTVAGQDAVIVLLGT---RNDLSPTTVM----SEGARNIVAAMKAHGVDKVVACT 110

Query: 131 SISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIH 190
           S   +        ++   T                           +   + G+  VA+ 
Sbjct: 111 SAFLLWDPTKVPPRLQAVTDD----------------HIRMH----KVLRESGLKYVAVM 150

Query: 191 PATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGR 250
           P      +    L  +  V       S           +   D+    +    +    G 
Sbjct: 151 P----PHIGDQPLTGAYTVTLDGRGPS---------RVISKHDLGHFMLRCLTTDEYDGH 197

Query: 251 YLCTNGIYQ 259
               +  YQ
Sbjct: 198 STYPSHQYQ 206

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} Length = 372

 Score = 82.9 bits (205), Expect = 2e-18
 Identities = 52/303 (17%), Positives = 100/303 (33%), Gaps = 69/303 (22%)

Query: 11  TVCVTGANGFIGTWLVKTLL---------DNNYTSINATVFPGSDSSHLFALPGAGDANL 61
            V + G NGFIG  L K +L          +  T              L          +
Sbjct: 26  KVLILGVNGFIGHHLSKRILETTDWEVFGMDMQT---------DRLGDLVKHE-----RM 71

Query: 62  RVFEADV-LDSGAVSRAVEGCKGVFHVASPCT----LEDPVDPEKELILPAVQGTLNVLE 116
             FE D+ ++   V   V+ C  +  + +  T    ++ P+     +     +  L ++ 
Sbjct: 72  HFFEGDITINKEWVEYHVKKCDVILPLVAIATPATYVKQPL----RVFELDFEANLPIVR 127

Query: 117 AAKRFGVRRVVV-TSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW-YPVSKTLAEKA 174
           +A ++G   V   TS +  +  +  +        ++  +   K R  W Y  SK L ++ 
Sbjct: 128 SAVKYGKHLVFPSTSEVYGMCADEQFDPDA-SALTYGPIN--KPR--WIYACSKQLMDRV 182

Query: 175 AWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAV-------LQQLLQGSKDT------Q 221
            W +    G++     P   +GP +                 L  +++G   +      Q
Sbjct: 183 IWGYG-MEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQ 241

Query: 222 E----YHWLGAVPVKDVAKAQVLLFESPAASGRYLCTN-----GIYQFGDFAERVSKLFP 272
           +    Y       V D   A + + E+          N       +   + A ++ +L  
Sbjct: 242 KRAFTY-------VDDGISALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAA 294

Query: 273 EFP 275
           EFP
Sbjct: 295 EFP 297

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312

 Score = 81.6 bits (202), Expect = 4e-18
 Identities = 48/283 (16%), Positives = 94/283 (33%), Gaps = 38/283 (13%)

Query: 12  VCVTGANGFIGTWLVKTLLD-NNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
           + + GA G IGT L + L       ++ A        S +  L      +      + LD
Sbjct: 5   ILIIGACGQIGTELTQKLRKLYGTENVIA--------SDIRKLNTDVVNSGPFEVVNALD 56

Query: 71  SGAVSRAVEGCK--GVFHVASPCTLEDPVDPEKELILPA---VQGTLNVLEAAKRFGVRR 125
              +   VE  K   ++ +A+  +       EK         +    +VL  AK   +++
Sbjct: 57  FNQIEHLVEVHKITDIYLMAALLS----ATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKK 112

Query: 126 VVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSR-KKWYPVSKTLAEKAAWEFAEKHGV 184
           +   SSI+   P      K          +Y        Y +SK   E+    +   +GV
Sbjct: 113 IFWPSSIAVFGPTT---PKENTP------QYTIMEPSTVYGISKQAGERWCEYYHNIYGV 163

Query: 185 DVVAIHPATCLGPLMQP---YLNASCAVLQQLLQGSKDT---QEYHWLGAVPVKDVAKAQ 238
           DV +I     +     P     + +  +  + +   K          +  + + D   A 
Sbjct: 164 DVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDAT 223

Query: 239 VLLFESPAASGRYLCTNGIYQF----GDFAERVSKLFPEFPVH 277
           + + ++P    +   +  +        + A  + K  PEF + 
Sbjct: 224 INIMKAPVEKIKIHSSYNLAAMSFTPTEIANEIKKHIPEFTIT 266

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351

 Score = 81.5 bits (202), Expect = 6e-18
 Identities = 43/219 (19%), Positives = 77/219 (35%), Gaps = 41/219 (18%)

Query: 1   MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYT-----SINATVFPGSDSS---HLFA 52
           +  +     +T  +TG  GFIG+ L++ LL  N       + +     G   +       
Sbjct: 17  ITQQLIFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFS----TGHQYNLDEVKTL 72

Query: 53  LPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS----PCTLEDPVDPEKELILPAV 108
           +     +     E D+ D     + ++G   V H A+    P ++ DP+          +
Sbjct: 73  VSTEQWSRFCFIEGDIRDLTTCEQVMKGVDHVLHQAALGSVPRSIVDPITTNAT----NI 128

Query: 109 QGTLNVLEAAKRFGVRRVVVTSSISAI------VPNPGWKGKVFDETSWTDLEYCKSRKK 162
            G LN+L AAK   V+     +S S+       +P          E +        +   
Sbjct: 129 TGFLNILHAAKNAQVQSFTYAAS-SSTYGDHPALP--------KVEEN------IGNPLS 173

Query: 163 WYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQP 201
            Y V+K + E  A  +A  +G   + +      G    P
Sbjct: 174 PYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDP 212

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253

 Score = 79.1 bits (195), Expect = 1e-17
 Identities = 50/255 (19%), Positives = 78/255 (30%), Gaps = 49/255 (19%)

Query: 10  ETVCVTGANGFIGTWLVKTLLDNNYT-SINATVFPGSDSSHLFALPGAGDANLRVFEADV 68
            TV VTGA+G  G  + K L + +        V        +            VF  D+
Sbjct: 5   PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGG-------EADVFIGDI 57

Query: 69  LDSGAVSRAVEGCKGVFHVAS----------PCTLEDPVDPEKELILPA---VQGTLNVL 115
            D+ +++ A +G   +  + S          P     P    ++   P      G  N +
Sbjct: 58  TDADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQI 117

Query: 116 EAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAA 175
           +AAK  GV+ +VV  S+    P+                           V K  AE+  
Sbjct: 118 DAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGN---------------ILVWKRKAEQY- 161

Query: 176 WEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVA 235
                  G     I      G L+           ++LL G  D         VP  DVA
Sbjct: 162 ---LADSGTPYTIIRA----GGLLDKEGGV-----RELLVGKDDELLQTDTKTVPRADVA 209

Query: 236 KAQVLLFESPAASGR 250
           +  +       A  +
Sbjct: 210 EVCIQALLFEEAKNK 224

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312

 Score = 78.7 bits (195), Expect = 4e-17
 Identities = 59/264 (22%), Positives = 91/264 (34%), Gaps = 68/264 (25%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD---SSHLFALPGAGDANLRVFEADV 68
           + VTG  GFIG+ LV  L++  Y      V    D   S     +      +  +   D+
Sbjct: 3   IVVTGGAGFIGSHLVDKLVELGYE---VVVV---DNLSSGRREFVN----PSAELHVRDL 52

Query: 69  LDSGAVSRAVEGCKGVFHVAS----PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR 124
            D      A      VFH A+      +  +P+    E     V  T NVLE A++ GVR
Sbjct: 53  KDYSWG--AGIKGDVVFHFAANPEVRLSTTEPIVHFNE----NVVATFNVLEWARQTGVR 106

Query: 125 RVVVTSSISAI------VPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEF 178
            VV  SS S +      +P          E               Y  +K   E     +
Sbjct: 107 TVVFASS-STVYGDADVIP--------TPEEEPYKPISV------YGAAKAAGEVMCATY 151

Query: 179 AEKHGVDVVAIHPATCLGPLMQPYLNASCAV----LQQLLQGSK------D-TQE--YHW 225
           A   GV  +A+  A  +GP ++        V    + +L +         D TQ   Y  
Sbjct: 152 ARLFGVRCLAVRYANVVGPRLRH------GVIYDFIMKLRRNPNVLEVLGDGTQRKSY-- 203

Query: 226 LGAVPVKDVAKAQVLLFESPAASG 249
              + V+D  +A +  ++      
Sbjct: 204 ---LYVRDAVEATLAAWKKFEEMD 224

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Length = 369

 Score = 77.3 bits (190), Expect = 2e-16
 Identities = 41/253 (16%), Positives = 69/253 (27%), Gaps = 59/253 (23%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           + +TGA GF+G  L   L                              +  +FE      
Sbjct: 3   IVITGAKGFVGKNLKADLTSTT--------------------------DHHIFEVHRQTK 36

Query: 72  GA-VSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVV-VT 129
              +  A+     + H+A     E   +         V    +VL+   R   +  + ++
Sbjct: 37  EEELESALLKADFIVHLAGVNRPEHDKEFSLG----NVSYLDHVLDILTRNTKKPAILLS 92

Query: 130 SSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAI 189
           SSI A   NP                        Y  SK   E+   E+AE++G  V   
Sbjct: 93  SSIQATQDNP------------------------YGESKLQGEQLLREYAEEYGNTVYIY 128

Query: 190 HPATCLGPLMQP-YLNASCAVLQQLLQGS--KDTQEYHWLGAVPVKDVAKAQVLLFESPA 246
                 G   +P Y +       ++ +    +       L    V D+        E   
Sbjct: 129 RWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGTP 188

Query: 247 ASGRYLCTNGIYQ 259
                + T     
Sbjct: 189 TIENGVPTVPNVF 201

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score = 74.7 bits (184), Expect = 3e-16
 Identities = 43/241 (17%), Positives = 81/241 (33%), Gaps = 50/241 (20%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           V V GANG +  +L+  L +  +    A V        L    GA D    +  A++ + 
Sbjct: 24  VLVVGANGKVARYLLSELKNKGHE-PVAMVRNEEQGPELRER-GASD----IVVANLEED 77

Query: 72  GAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAV--QGTLNVLEAAKRFGVRRVVVT 129
              S A      V   A                   +   G +  ++ A++ G++R ++ 
Sbjct: 78  --FSHAFASIDAVVFAAGSGPHTGADKTI------LIDLWGAIKTIQEAEKRGIKRFIMV 129

Query: 130 SSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAI 189
           SS+  + P+ G                     + Y V+K LA+    +  ++  +D   +
Sbjct: 130 SSVGTVDPDQGPMN-----------------MRHYLVAKRLAD----DELKRSSLDYTIV 168

Query: 190 HPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASG 249
            P    GPL             ++      ++      ++   DVAK    L +     G
Sbjct: 169 RP----GPLSNE------ESTGKVTVSPHFSE---ITRSITRHDVAKVIAELVDQQHTIG 215

Query: 250 R 250
           +
Sbjct: 216 K 216

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236

 Score = 74.4 bits (183), Expect = 4e-16
 Identities = 35/237 (14%), Positives = 72/237 (30%), Gaps = 48/237 (20%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            V + GA G I   ++  L D                + +           ++   DVL+
Sbjct: 25  NVLILGAGGQIARHVINQLADKQTIKQTLFA---RQPAKIHKPYPTN---SQIIMGDVLN 78

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
             A+ +A++G   V+   +   L+                  +V+ A K   V+R++   
Sbjct: 79  HAALKQAMQGQDIVYANLTGEDLD--------------IQANSVIAAMKACDVKRLIFVL 124

Query: 131 SISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIH 190
           S+      PG   +  +      L+                 + A +  E  G++   + 
Sbjct: 125 SLGIYDEVPGKFVEWNNAVIGEPLK---------------PFRRAADAIEASGLEYTILR 169

Query: 191 PATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAA 247
           P          +L     +  +L   ++  +       V  K VA     + + P  
Sbjct: 170 P---------AWLTDEDIIDYELTSRNEPFKG----TIVSRKSVAALITDIIDKPEK 213

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score = 73.9 bits (182), Expect = 5e-16
 Identities = 40/244 (16%), Positives = 80/244 (32%), Gaps = 58/244 (23%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADV-LD 70
           + + G+ G +G  L+K+L   +Y  I A          +                DV   
Sbjct: 3   IFIVGSTGRVGKSLLKSLSTTDYQ-IYAGA---RKVEQVPQYNNVK-----AVHFDVDWT 53

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
              +++ + G   + +V+            K      + G + +++AA++  V+R ++ S
Sbjct: 54  PEEMAKQLHGMDAIINVSGS----GGKSLLK----VDLYGAVKLMQAAEKAEVKRFILLS 105

Query: 131 SISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIH 190
           +I ++ P   W G  FD              K Y ++K  A+       ++  +D   I 
Sbjct: 106 TIFSLQP-EKWIGAGFDAL------------KDYYIAKHFADLYL---TKETNLDYTIIQ 149

Query: 191 PATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY----HWLGAVPVKDVAKAQVLLFESPA 246
           P                      L   + T           +  + DVA     L  +  
Sbjct: 150 PGA--------------------LTEEEATGLIDINDEVSASNTIGDVADTIKELVMTDH 189

Query: 247 ASGR 250
           + G+
Sbjct: 190 SIGK 193

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score = 73.9 bits (181), Expect = 6e-16
 Identities = 28/239 (11%), Positives = 69/239 (28%), Gaps = 35/239 (14%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           + + GA G  G+ +++   +  +  + A V    ++  +         ++ + + D+ D 
Sbjct: 3   IGIIGATGRAGSRILEEAKNRGHE-VTAIV---RNAGKITQTH----KDINILQKDIFD- 53

Query: 72  GAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS 131
                 +     V         E             V    +++         R++V   
Sbjct: 54  -LTLSDLSDQNVVVDAYGISPDEAEKH---------VTSLDHLISVLNGTVSPRLLVVGG 103

Query: 132 ISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHP 191
            +++  +      + +     +  Y        P ++  A++     + +       I P
Sbjct: 104 AASLQIDED-GNTLLESKGLREAPYY-------PTARAQAKQLEHLKSHQAEFSWTYISP 155

Query: 192 ATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGR 250
           +    P               LL GS           + ++D A A +   E P     
Sbjct: 156 SAMFEP--GERTGDYQIGKDHLLFGSDGN------SFISMEDYAIAVLDEIERPNHLNE 206

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221

 Score = 73.5 bits (180), Expect = 9e-16
 Identities = 34/238 (14%), Positives = 61/238 (25%), Gaps = 45/238 (18%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            + + GA G I   L  TLL      I                       + V E    +
Sbjct: 7   YITILGAAGQIAQXLTATLLTYTDMHITLYG---RQLKTRIPPEIIDHERVTVIEGSFQN 63

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
            G + +AV   + VF  A                  +     ++++A  R  +RRV+  S
Sbjct: 64  PGXLEQAVTNAEVVFVGAM----------------ESGSDMASIVKALSRXNIRRVIGVS 107

Query: 131 SISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIH 190
                   P    K                    P+S    E+ A     +  ++   + 
Sbjct: 108 MAGLSGEFPVALEKW--------------TFDNLPISYVQGERQARNVLRESNLNYTILR 153

Query: 191 PATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAAS 248
                  L          ++ +                V  + V KA   +  +   +
Sbjct: 154 L----TWLYNDPEXTDYELIPE--------GAQFNDAQVSREAVVKAIFDILHAADET 199

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311

 Score = 74.5 bits (184), Expect = 1e-15
 Identities = 39/134 (29%), Positives = 59/134 (44%), Gaps = 23/134 (17%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD---SSHLFALPGAGDANLRVFEAD 67
            V VTG  GFIG+ +V+ LL          V    D   +     +P      +  F  D
Sbjct: 2   RVLVTGGAGFIGSHIVEDLLARGLE---VAVL---DNLATGKRENVP----KGVPFFRVD 51

Query: 68  VLDSGAVSRAVEGCK--GVFHVAS----PCTLEDPVDPEKELILPAVQGTLNVLEAAKRF 121
           + D   V RA    +   V H A+      ++EDPV   +      + G LN+LEA +++
Sbjct: 52  LRDKEGVERAFREFRPTHVSHQAAQASVKVSVEDPVLDFEV----NLLGGLNLLEACRQY 107

Query: 122 GVRRVVVTSSISAI 135
           GV ++V  S+  AI
Sbjct: 108 GVEKLVFASTGGAI 121

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330

 Score = 72.6 bits (179), Expect = 5e-15
 Identities = 35/130 (26%), Positives = 56/130 (43%), Gaps = 24/130 (18%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD---SSHLFALPGAGDANLRVFEAD 67
            + +TG  G +G+ L++  L   +      V    D   +     LP    A L V E  
Sbjct: 22  RILITGGAGCLGSNLIEHWLPQGHE---ILVI---DNFATGKREVLPPV--AGLSVIEGS 73

Query: 68  VLDSGAVSRAVEGCK--GVFHVA----SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF 121
           V D+G + RA +  K   V H A     P   +D  +         VQG++NV +AA + 
Sbjct: 74  VTDAGLLERAFDSFKPTHVVHSAAAYKDP---DDWAEDAAT----NVQGSINVAKAASKA 126

Query: 122 GVRRVVVTSS 131
           GV+R++   +
Sbjct: 127 GVKRLLNFQT 136

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score = 67.7 bits (165), Expect = 9e-14
 Identities = 33/240 (13%), Positives = 58/240 (24%), Gaps = 35/240 (14%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS-DSSHLFALPGAGDANLRVFEADVLD 70
           + V GA G  G+ +V       +      V     D        GA      V       
Sbjct: 3   IAVLGATGRAGSAIVAEARRRGHE-----VLAVVRDPQKAADRLGAT-----VATLVKEP 52

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
                  ++    V    S      P    +  +   +    +++   +      V +  
Sbjct: 53  LVLTEADLDSVDAVVDALSV-----PWGSGRGYL--HLDFATHLVSLLRNSDTLAVFILG 105

Query: 131 SISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIH 190
           S S  +P         D     D     + + WY  +                V+ + I 
Sbjct: 106 SASLAMPGA-------DHPMILDFPESAASQPWYDGALYQYY-EYQFLQMNANVNWIGIS 157

Query: 191 PATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGR 250
           P+            A    L     G            +   ++A A +   E P A   
Sbjct: 158 PSEAFPSGPATSYVAGKDTLLVGEDGQ---------SHITTGNMALAILDQLEHPTAIRD 208

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* Length = 343

 Score = 69.3 bits (170), Expect = 9e-14
 Identities = 48/212 (22%), Positives = 83/212 (39%), Gaps = 44/212 (20%)

Query: 6   EKEEETVCVTGANGFIGTWLVKTLL---------DNNYTSINATVFPGSDS--SHLFALP 54
           EK+ + + +TG  GF+G+ L   L+         DN +T        G      H     
Sbjct: 24  EKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFT--------GRKRNVEHWIGHE 75

Query: 55  GAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVASPCT----LEDPVDPEKELILPAVQG 110
                N  +   DV++   +         ++H+ASP +    + +P+    + +     G
Sbjct: 76  -----NFELINHDVVEPLYIE-----VDQIYHLASPASPPNYMYNPI----KTLKTNTIG 121

Query: 111 TLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW-YPVSKT 169
           TLN+L  AKR G R  ++ +S S +  +P  +     E  W  +     R    Y   K 
Sbjct: 122 TLNMLGLAKRVGAR--LLLASTSEVYGDP--EVHPQSEDYWGHVNPIGPR--ACYDEGKR 175

Query: 170 LAEKAAWEFAEKHGVDVVAIHPATCLGPLMQP 201
           +AE   + + ++ GV+V         GP M  
Sbjct: 176 VAETMCYAYMKQEGVEVRVARIFNTFGPRMHM 207

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299

 Score = 67.4 bits (165), Expect = 3e-13
 Identities = 28/125 (22%), Positives = 48/125 (38%), Gaps = 14/125 (11%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATV-FPGSDSSHLFALPGAGDANLRVFEADVL 69
            V V G  G  G  + +TLL++    +      P   ++    L GA      V + D  
Sbjct: 7   LVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGA-----EVVQGDQD 61

Query: 70  DSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVT 129
           D   +  A+ G    F V +     +    E+E+     QG   + + A+R G+  VV +
Sbjct: 62  DQVIMELALNGAYATFIVTNY---WESCSQEQEV----KQGK-LLADLARRLGLHYVVYS 113

Query: 130 SSISA 134
              + 
Sbjct: 114 GLENI 118

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357

 Score = 67.3 bits (165), Expect = 5e-13
 Identities = 51/293 (17%), Positives = 90/293 (30%), Gaps = 39/293 (13%)

Query: 1   MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD---SSHLFALPGAG 57
               +  E   + VTG  GFIG+ +VK L D   T I   V    D       F      
Sbjct: 38  TGGGSGIEGRMIIVTGGAGFIGSNIVKALNDKGITDI--LVV---DNLKDGTKFVNLVDL 92

Query: 58  DANLRVFEADVLDSGAVSRAVEGCKGVFHVA----SPCTLEDPVDPEKELILPAVQGTLN 113
           +    + + D L            + +FH      +             ++    Q +  
Sbjct: 93  NIADYMDKEDFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKY------MMDNNYQYSKE 146

Query: 114 VLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEK 173
           +L       +   +  SS +A     G +   F E+   + E   +    +  SK L ++
Sbjct: 147 LLHYCLEREI-PFLYASS-AATY---GGRTSDFIES--REYEKPLNV---FGYSKFLFDE 196

Query: 174 AAWEFAEKHGVDVVAIHPATCLGPLMQP---YLNASCAVLQQLLQGSKDTQEYHWLGA-- 228
              +   +    +V        GP         + +  +  QL  G +  + +       
Sbjct: 197 YVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNG-ESPKLFEGSENFK 255

Query: 229 ---VPVKDVAKAQVLLFESPAASGRY-LCTNGIYQFGDFAERVSKLFPEFPVH 277
              V V DVA   +   E+   SG + L T     F   A+       +  + 
Sbjct: 256 RDFVYVGDVADVNLWFLENG-VSGIFNLGTGRAESFQAVADATLAYHKKGQIE 307

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310

 Score = 65.7 bits (161), Expect = 1e-12
 Identities = 51/282 (18%), Positives = 88/282 (31%), Gaps = 39/282 (13%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD---SSHLFALPGAGDANLRVFEADV 68
           + VTG  GFIG+ +VK L D   T I   V    D       F      +    + + D 
Sbjct: 2   IIVTGGAGFIGSNIVKALNDKGITDI--LVV---DNLKDGTKFVNLVDLNIADYMDKEDF 56

Query: 69  LDSGAVSRAVEGCKGVFHVA----SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR 124
           L            + +FH      +             ++    Q +  +L       + 
Sbjct: 57  LIQIMAGEEFGDVEAIFHEGACSSTTEWDGKY------MMDNNYQYSKELLHYCLEREI- 109

Query: 125 RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGV 184
             +  SS +A     G +   F E+   + E   +    Y  SK L ++   +   +   
Sbjct: 110 PFLYASS-AATY---GGRTSDFIES--REYEKPLNV---YGYSKFLFDEYVRQILPEANS 160

Query: 185 DVVAIHPATCLGPLMQP---YLNASCAVLQQLLQGSKDTQEYHWLGA-----VPVKDVAK 236
            +V        GP         + +  +  QL  G +  + +          V V DVA 
Sbjct: 161 QIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNG-ESPKLFEGSENFKRDFVYVGDVAD 219

Query: 237 AQVLLFESPAASGRY-LCTNGIYQFGDFAERVSKLFPEFPVH 277
             +   E+   SG + L T     F   A+       +  + 
Sbjct: 220 VNLWFLENG-VSGIFNLGTGRAESFQAVADATLAYHKKGQIE 260

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* Length = 404

 Score = 62.1 bits (151), Expect = 3e-11
 Identities = 47/317 (14%), Positives = 87/317 (27%), Gaps = 56/317 (17%)

Query: 14  VTGANGFIGTWLVKTLLDNNYTSIN---------------ATVFPGSDSSH-LFALPGAG 57
           V G +G+ G      L   NY                    ++ P +     +       
Sbjct: 16  VIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALT 75

Query: 58  DANLRVFEADVLDSGAVSRAVEGCK--GVFHVAS----PCTLEDPVDPEKELILPAVQGT 111
             ++ ++  D+ D   ++ + +  +   V H       P ++ D            V GT
Sbjct: 76  GKSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRA-VYTQHNNVIGT 134

Query: 112 LNVLEAAKRFGVRRVVVTSSISAI-----VPNPGWKGKVFDETSWTDLEYCKSRKKWYPV 166
           LNVL A K FG    +V            +        +        L Y K    +Y +
Sbjct: 135 LNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHL 194

Query: 167 SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCA----------------VL 210
           SK           +  G+    ++     G                              
Sbjct: 195 SKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFC 254

Query: 211 QQLLQGS------KDTQEYHWLGAVPVKDVAKAQVLLFESPAASGRYLCTNG---IYQFG 261
            Q   G       K  Q   +L    ++D  +   +   +PA +G +   N     +   
Sbjct: 255 VQAAVGHPLTVYGKGGQTRGYLD---IRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVN 311

Query: 262 DFAERVSKLFPEFPVHS 278
           + A  V+K   +  +  
Sbjct: 312 ELASLVTKAGSKLGLDV 328

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* Length = 352

 Score = 61.8 bits (150), Expect = 3e-11
 Identities = 25/133 (18%), Positives = 45/133 (33%), Gaps = 19/133 (14%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS-HLFALPGAGDANLRVFEADVL 69
           T+ V GA G  G  L++      +             +  L A+P        +F+  +L
Sbjct: 7   TIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNV-----TLFQGPLL 61

Query: 70  DSGA-VSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVV 128
           ++   +    EG    F   +            E+      G  ++ +AAKR G  +  +
Sbjct: 62  NNVPLMDTLFEGAHLAFINTTS-------QAGDEI----AIGK-DLADAAKRAGTIQHYI 109

Query: 129 TSSISAIVPNPGW 141
            SS+        W
Sbjct: 110 YSSMPDHSLYGPW 122

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289

 Score = 61.1 bits (149), Expect = 4e-11
 Identities = 21/129 (16%), Positives = 44/129 (34%), Gaps = 16/129 (12%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            + +TGA G +GT +    + N+    +  V    +   +          + V + D  +
Sbjct: 2   NIMLTGATGHLGTHITNQAIANHIDHFHIGV---RNVEKVPDDWRGK---VSVRQLDYFN 55

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
             ++  A +G   V  +                    +    N++ AAK+ GV  ++   
Sbjct: 56  QESMVEAFKGMDTVVFI-PSIIHPSF---------KRIPEVENLVYAAKQSGVAHIIFIG 105

Query: 131 SISAIVPNP 139
             +    NP
Sbjct: 106 YYADQHNNP 114

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362

 Score = 60.0 bits (146), Expect = 2e-10
 Identities = 50/278 (17%), Positives = 94/278 (33%), Gaps = 62/278 (22%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTS--------INATVFPGSDSSHLFALPGAGDANLR 62
           T+ +TG  GF+G+ L     +N+  +         + T+F  +  S L            
Sbjct: 12  TILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGE 71

Query: 63  VFEADVLDSGAVSRAVE-GCKGVFHVA--SPCTLEDPVDPEKELILPAVQGTLNVLEAAK 119
           V  AD+ +   + R  +     +FH A  S  T+ +     + ++    Q  LN+LE A+
Sbjct: 72  VIAADINNPLDLRRLEKLHFDYLFHQAAVSDTTMLNQ----ELVMKTNYQAFLNLLEIAR 127

Query: 120 RFGVRRVVVTSSISAI---VPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAW 176
                +V+  SS + +      P               E  ++    Y  SK   ++  +
Sbjct: 128 SKKA-KVIYASS-AGVYGNTKAP------NVV---GKNESPENV---YGFSKLCMDE--F 171

Query: 177 EFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQ---QLLQGS-----KD-TQE----Y 223
             +  +    V +      GP        +  VLQ     +        +   Q     Y
Sbjct: 172 VLSHSNDNVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVY 231

Query: 224 HWLGAVPVKDVAKAQVLLFESPAASGRYLCTNGIYQFG 261
                  ++DV +A V   ++          +G+Y  G
Sbjct: 232 -------IEDVIQANVKAMKAQK--------SGVYNVG 254

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 Length = 660

 Score = 59.3 bits (144), Expect = 3e-10
 Identities = 47/229 (20%), Positives = 87/229 (37%), Gaps = 26/229 (11%)

Query: 2   ASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANL 61
            +   +    V + G NGFIG  L + LL  ++  +          S     P     + 
Sbjct: 308 PACTARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHP-----HF 362

Query: 62  RVFEADV-LDSGAVSRAVEGCKGVFHVASPCT----LEDPVDPEKELILPAVQGTLNVLE 116
              E D+ + S  +   V+ C  V  + +  T      +P+     +     +  L ++ 
Sbjct: 363 HFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLR----VFELDFEENLRIIR 418

Query: 117 AAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW-YPVSKTLAEKAA 175
              ++  R  ++  S S +        K FDE     +    ++ +W Y VSK L ++  
Sbjct: 419 YCVKYRKR--IIFPSTSEVYGMC--SDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474

Query: 176 WEFAEKHGVDVVAIHPATCLGPLM----QPYLNASCAVLQ---QLLQGS 217
           W + EK G+      P   +GP +       + +S A+ Q    L++GS
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGS 523

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478

 Score = 55.7 bits (134), Expect = 4e-09
 Identities = 53/294 (18%), Positives = 76/294 (25%), Gaps = 54/294 (18%)

Query: 2   ASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATV-------------------F 42
                 E  TV +TGA GF+G +LV  LL      ++  +                   F
Sbjct: 66  LPGPSPELRTVLLTGATGFLGRYLVLELLRR--LDVDGRLICLVRAESDEDARRRLEKTF 123

Query: 43  PGSDSSHLFALPGAGDANLRVFEADV------LDSGAVSRAVEGCKGVFHVASPCTLEDP 96
              D   L          L V   D       LD     R  E    +   A+       
Sbjct: 124 DSGDPELLRHFKELAADRLEVVAGDKSEPDLGLDQPMWRRLAETVDLIVDSAAM------ 177

Query: 97  VD--PEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDL 154
           V+  P  EL  P V GT  ++  A    ++     S+   +           D       
Sbjct: 178 VNAFPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTAD-VGAAIEPSAFTEDADIRVIS 236

Query: 155 EYCKSRKKW---YPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQ----------P 201
                   W   Y  SK   E    E  +   + V        L                
Sbjct: 237 PTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVT 296

Query: 202 YLNASCAVLQQL--LQGSKDTQEYHWLGA---VPVKDVAKAQVLLFESPAASGR 250
            +  S              D++          +PV  VA+A  +L    A S  
Sbjct: 297 RMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSL 350

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287

 Score = 55.4 bits (134), Expect = 4e-09
 Identities = 27/125 (21%), Positives = 48/125 (38%), Gaps = 17/125 (13%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTS-INATVFPGSDSSHLFALPGAGDANLRVFEADVL 69
           ++ VTGA G +G  +++ LL     S I A V    +      L   G   + V   D  
Sbjct: 2   SIAVTGATGQLGGLVIQHLLKKVPASQIIAIV---RNVEKASTLADQG---VEVRHGDYN 55

Query: 70  DSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVT 129
              ++ +A  G   +  ++ P       +         +    NV++AA+  GV+ +  T
Sbjct: 56  QPESLQKAFAGVSKLLFISGP----HYDNTL------LIVQHANVVKAARDAGVKHIAYT 105

Query: 130 SSISA 134
               A
Sbjct: 106 GYAFA 110

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286

 Score = 55.0 bits (133), Expect = 4e-09
 Identities = 30/122 (24%), Positives = 57/122 (46%), Gaps = 19/122 (15%)

Query: 14  VTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSG 72
           +TGA G +G +++++L+     + I A V    + +   AL   G   + V +AD  D  
Sbjct: 4   ITGATGQLGHYVIESLMKTVPASQIVAIV---RNPAKAQALAAQG---ITVRQADYGDEA 57

Query: 73  AVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSI 132
           A++ A++G + +  ++S     +      +          NV+ AAK  GV+ +  TS +
Sbjct: 58  ALTSALQGVEKLLLISSS----EVGQRAPQ--------HRNVINAAKAAGVKFIAYTSLL 105

Query: 133 SA 134
            A
Sbjct: 106 HA 107

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242

 Score = 53.7 bits (129), Expect = 1e-08
 Identities = 43/261 (16%), Positives = 67/261 (25%), Gaps = 56/261 (21%)

Query: 11  TVCVTGANGFIGTWLVKTLL-DNNYTSINATV---FPGSDSSHLFALPGAGDANLRVFEA 66
           +V + GA+G  G  L+K +L    ++ +           + ++          N+     
Sbjct: 20  SVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAY---------KNVNQEVV 70

Query: 67  DVLDSGAVSRAVEGCKGVFHVASPC---TLEDPVDPEKELILPAVQGTLNVLEAAKRFGV 123
           D       + A +G    F     C   T           +       L   E AK  G 
Sbjct: 71  DFEKLDDYASAFQGHDVGFC----CLGTTRGKAGAEGFVRV--DRDYVLKSAELAKAGGC 124

Query: 124 RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHG 183
           +   + SS  A            D++S             Y   K   E    E      
Sbjct: 125 KHFNLLSSKGA------------DKSSNFL----------YLQVKGEVEAKVEELKFDR- 161

Query: 184 VDVVAIHPATCLGP--LMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLL 241
                  P   L      +P           L              +VPV  V +A +  
Sbjct: 162 --YSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASGH------SVPVVTVVRAMLNN 213

Query: 242 FESPAASGRYLCTNG-IYQFG 261
              P      L  N  I+  G
Sbjct: 214 VVRPRDKQMELLENKAIHDLG 234

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* Length = 357

 Score = 52.9 bits (127), Expect = 3e-08
 Identities = 42/169 (24%), Positives = 59/169 (34%), Gaps = 23/169 (13%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVF-----PGSDSSHLFALPGAGDANLRVFEA 66
           V VTG  GF G WL   L      ++ ATV        +  S  F      D  ++    
Sbjct: 12  VFVTGHTGFKGGWLSLWLQ-----TMGATVKGYSLTAPTVPSL-FETARVAD-GMQSEIG 64

Query: 67  DVLDSGAVSRAVEGCK--GVFH-VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV 123
           D+ D   +  ++   +   VFH  A P       +P  E     V GT+ +LEA +  G 
Sbjct: 65  DIRDQNKLLESIREFQPEIVFHMAAQPLVRLSYSEP-VETYSTNVMGTVYLLEAIRHVGG 123

Query: 124 RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAE 172
            + VV  +      N  W    + E               Y  SK  AE
Sbjct: 124 VKAVVNITSDKCYDNKEWI-WGYRENEAMGGYD------PYSNSKGCAE 165

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* Length = 344

 Score = 51.9 bits (125), Expect = 7e-08
 Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 11/132 (8%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGA-GDANLRVFEADVL 69
           T+ +TG  G  G   V+ +LD   T+    +    D      +     D  +R F  DV 
Sbjct: 23  TILITGGTGSFGKCFVRKVLDT--TNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVR 80

Query: 70  DSGAVSRAVEGCKGVFHVAS----PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRR 125
           D   ++ A+EG     H A+    P    +P+    E I   + G  NV+ A  +  + +
Sbjct: 81  DLERLNYALEGVDICIHAAALKHVPIAEYNPL----ECIKTNIMGASNVINACLKNAISQ 136

Query: 126 VVVTSSISAIVP 137
           V+  S+  A  P
Sbjct: 137 VIALSTDKAANP 148

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* Length = 337

 Score = 51.0 bits (123), Expect = 1e-07
 Identities = 39/129 (30%), Positives = 52/129 (40%), Gaps = 25/129 (19%)

Query: 14  VTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL----------PGAGDANLRV 63
           VTG  GFIG+  V+ LL   Y        P  +   L +L          P   D  LR 
Sbjct: 5   VTGGAGFIGSHFVRQLLAGAYPD-----VPADEVIVLDSLTYAGNRANLAPVDADPRLRF 59

Query: 64  FEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVD-----PEKELILPAVQGTLNVLEAA 118
              D+ D+G ++R + G   + H A+    E  VD              VQGT  +L+ A
Sbjct: 60  VHGDIRDAGLLARELRGVDAIVHFAA----ESHVDRSIAGAS-VFTETNVQGTQTLLQCA 114

Query: 119 KRFGVRRVV 127
              GV RVV
Sbjct: 115 VDAGVGRVV 123

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313

 Score = 50.3 bits (120), Expect = 2e-07
 Identities = 20/131 (15%), Positives = 41/131 (31%), Gaps = 14/131 (10%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS--DSSHLFALPGAGDANLRVFEADV 68
            V + G  G+IG  +V   +   + +      P    +   +  L        ++ EA +
Sbjct: 6   RVLIVGGTGYIGKRIVNASISLGHPTY-VLFRPEVVSNIDKVQMLLYFKQLGAKLIEASL 64

Query: 69  LDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVV 128
            D   +  A++    V    +   L   +  + +L+           EA K  G  +  +
Sbjct: 65  DDHQRLVDALKQVDVVISALAGGVLSHHILEQLKLV-----------EAIKEAGNIKRFL 113

Query: 129 TSSISAIVPNP 139
            S         
Sbjct: 114 PSEFGMDPDIM 124

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286

 Score = 50.1 bits (120), Expect = 2e-07
 Identities = 23/143 (16%), Positives = 40/143 (27%), Gaps = 19/143 (13%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            + + G  G +G  L + L    +      V  G   S          A ++   ADV  
Sbjct: 5   KILIAGC-GDLGLELARRLTAQGHE-----VT-GLRRS-----AQPMPAGVQTLIADVTR 52

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
              ++  V     +       +               V+G  N L A +   ++ V   S
Sbjct: 53  PDTLASIVHLRPEILVYCVAASEYSDEHYRLSY----VEGLRNTLSALEGAPLQHVFFVS 108

Query: 131 SISAIVPNPGWKGKVFDETSWTD 153
           S            +  DE +   
Sbjct: 109 STGV---YGQEVEEWLDEDTPPI 128

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 Length = 347

 Score = 49.9 bits (120), Expect = 3e-07
 Identities = 29/127 (22%), Positives = 48/127 (37%), Gaps = 17/127 (13%)

Query: 14  VTGANGFIGTWLVKTLLDNNYTSIN--ATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           +TG  GF+G+ L    L      I        G+  + L  L  +   N      D+ + 
Sbjct: 6   ITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDN-LHWL--SSLGNFEFVHGDIRNK 62

Query: 72  GAVSRAVEGCK--GVFHVASPCTLEDPVD-----PEKELILPAVQGTLNVLEAAKRFGVR 124
             V+R +        FH+A     +  +      P        V GTLN+LEA +++   
Sbjct: 63  NDVTRLITKYMPDSCFHLAG----QVAMTTSIDNPC-MDFEINVGGTLNLLEAVRQYNSN 117

Query: 125 RVVVTSS 131
             ++ SS
Sbjct: 118 CNIIYSS 124

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308

 Score = 49.1 bits (117), Expect = 5e-07
 Identities = 38/275 (13%), Positives = 72/275 (26%), Gaps = 62/275 (22%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS---DSSHLFALPGAGDANLRVFEAD 67
            + + GA G+IG  + K  LD  +      V   +   +S     L     +   +    
Sbjct: 6   RILLIGATGYIGRHVAKASLDLGHP-TFLLVRESTASSNSEKAQLLESFKASGANIVHGS 64

Query: 68  VLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVV 127
           + D  ++  AV+    V                       ++  +N+++A K  G  +  
Sbjct: 65  IDDHASLVEAVKNVDVVISTVGS---------------LQIESQVNIIKAIKEVGTVKRF 109

Query: 128 VTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAA-WEFAEKHGVDV 186
             S     V N                          P       KA      E  G+  
Sbjct: 110 FPSEFGNDVDNVHA---------------------VEPAKSVFEVKAKVRRAIEAEGIPY 148

Query: 187 VAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG-------AVPVKDVAKAQV 239
             +            +L +    L Q    +    +   LG        V  +D+    +
Sbjct: 149 TYVSS----NCFAGYFLRS----LAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTI 200

Query: 240 LLFESPAASGR--YLCTNG----IYQFGDFAERVS 268
              + P    +  YL        + +     E+  
Sbjct: 201 KAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKI 235

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215

 Score = 48.1 bits (115), Expect = 6e-07
 Identities = 44/259 (16%), Positives = 77/259 (29%), Gaps = 61/259 (23%)

Query: 11  TVCVTGANGFIGTWLVKTLL-DNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVL 69
            V + GA G  G  L+  +L +     + A                A    L      + 
Sbjct: 7   RVLLAGATGLTGEHLLDRILSEPTLAKVIAPARK----------ALAEHPRLDNPVGPLA 56

Query: 70  DSGAVSRAVEGCKGVFHVASPC---TLEDPVDPEKELILPAVQ--GTLNVLEAAKRFGVR 124
           +   + +        F     C   T+++    E      AV     L V + A   G R
Sbjct: 57  EL--LPQLDGSIDTAFC----CLGTTIKEAGSEEA---FRAVDFDLPLAVGKRALEMGAR 107

Query: 125 RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGV 184
             +V S++ A            D  S             Y   K   E+A  E       
Sbjct: 108 HYLVVSALGA------------DAKSSIF----------YNRVKGELEQALQEQGWPQ-- 143

Query: 185 DVVAIHPATCLGPLMQPYLNA--SCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLF 242
            +    P+   GP  + +  A    A + ++L G            +   D+A+A   L 
Sbjct: 144 -LTIARPSLLFGP-REEFRLAEILAAPIARILPGK--------YHGIEACDLARALWRLA 193

Query: 243 ESPAASGRYLCTNGIYQFG 261
                  R++ ++ + + G
Sbjct: 194 LEEGKGVRFVESDELRKLG 212

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318

 Score = 48.7 bits (116), Expect = 6e-07
 Identities = 34/261 (13%), Positives = 65/261 (24%), Gaps = 60/261 (22%)

Query: 1   MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDAN 60
           M     K    + + G  G+IG  +VK  L   +      VF   +SS    L       
Sbjct: 5   MEENGMKS--KILIFGGTGYIGNHMVKGSLKLGH---PTYVFTRPNSSKTTLLDEFQSLG 59

Query: 61  LRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKR 120
             + + ++ +   +   ++    V    +                P +     +LEA K 
Sbjct: 60  AIIVKGELDEHEKLVELMKKVDVVISALAF---------------PQILDQFKILEAIKV 104

Query: 121 FGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAA-WEFA 179
            G  +  + S                                  P    +  K       
Sbjct: 105 AGNIKRFLPSDFGVEEDRINALP---------------------PFEALIERKRMIRRAI 143

Query: 180 EKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG-------AVPVK 232
           E+  +    +            ++N        LL+      E    G           +
Sbjct: 144 EEANIPYTYVSA----NCFASYFIN-------YLLRPYDPKDEITVYGTGEAKFAMNYEQ 192

Query: 233 DVAKAQVLLFESPAASGRYLC 253
           D+    + +   P A  R + 
Sbjct: 193 DIGLYTIKVATDPRALNRVVI 213

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* Length = 348

 Score = 47.5 bits (114), Expect = 2e-06
 Identities = 30/123 (24%), Positives = 49/123 (39%), Gaps = 18/123 (14%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS----SHLFALPGAGDANLRVFEA 66
            + VTG  GFIG+  V  +  NN+  ++ TV    D      +   L       + +   
Sbjct: 6   NIIVTGGAGFIGSNFVHYVY-NNHPDVHVTVL---DKLTYAGNKANLEAILGDRVELVVG 61

Query: 67  DVLDSGAVSRAVEGCKGVFHVASPCTLEDPVD-----PEKELILPAVQGTLNVLEAAKRF 121
           D+ D+  V +       + H A+    E   D     P    I     GT  +LEAA+++
Sbjct: 62  DIADAELVDKLAAKADAIVHYAA----ESHNDNSLNDPS-PFIHTNFIGTYTLLEAARKY 116

Query: 122 GVR 124
            +R
Sbjct: 117 DIR 119

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score = 46.9 bits (112), Expect = 2e-06
 Identities = 29/258 (11%), Positives = 65/258 (25%), Gaps = 71/258 (27%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            + V G +G +G  +VK     +                        +A+   F      
Sbjct: 24  NILVLGGSGALGAEVVKFFKSKS-----WNTI-------SIDFRENPNADH-SFTIKDSG 70

Query: 71  SGAVSRAVEGCK-------------GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEA 117
              +   +E                G +   +  + ++ +   K +I   +         
Sbjct: 71  EEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNA-SSDEFLKSVKGMIDMNLYSAFASAHI 129

Query: 118 AKRFGVR--RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK----TLA 171
             +   +    V+T + +A+    G                       Y  +K     + 
Sbjct: 130 GAKLLNQGGLFVLTGASAALNRTSGMIA--------------------YGATKAATHHII 169

Query: 172 EKAAWEFAE-KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP 230
           +  A E      G   + I P T   P  +                 K   + ++    P
Sbjct: 170 KDLASENGGLPAGSTSLGILPVTLDTPTNR-----------------KYMSDANFDDWTP 212

Query: 231 VKDVAKAQVLLFESPAAS 248
           + +VA+       +  + 
Sbjct: 213 LSEVAEKLFEWSTNSDSR 230

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} Length = 330

 Score = 45.5 bits (109), Expect = 7e-06
 Identities = 28/139 (20%), Positives = 48/139 (34%), Gaps = 41/139 (29%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS---SHLFALPGAGDANLRVFEAD 67
           ++ + G  G+IG+  VK L+D   +     V    D+    H  A+        + +  D
Sbjct: 3   SILICGGAGYIGSHAVKKLVDEGLS---VVVV---DNLQTGHEDAIT----EGAKFYNGD 52

Query: 68  VLDSGAVSR--AVEGCKGVFHVASPCTLEDPVDPEKELIL-------PA------VQGTL 112
           + D   +      E  + V H A+               L       P       V G L
Sbjct: 53  LRDKAFLRDVFTQENIEAVMHFAA-------------DSLVGVSMEKPLQYYNNNVYGAL 99

Query: 113 NVLEAAKRFGVRRVVVTSS 131
            +LE    F V + + +S+
Sbjct: 100 CLLEVMDEFKVDKFIFSST 118

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307

 Score = 45.3 bits (107), Expect = 8e-06
 Identities = 34/254 (13%), Positives = 64/254 (25%), Gaps = 55/254 (21%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS---DSSHLFALPGAGDANLRVFEAD 67
            + + G  G IG  +V   +     +        +     +    +       + + E D
Sbjct: 4   KILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGD 63

Query: 68  VLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVV 127
           + D   + +A++    V   A                   ++  + +++A K  G  +  
Sbjct: 64  INDHETLVKAIKQVDIVICAAGR---------------LLIEDQVKIIKAIKEAGNVKKF 108

Query: 128 VTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAA-WEFAEKHGVDV 186
             S     V                            PV +   EKA+     E  GV  
Sbjct: 109 FPSEFGLDVDRHDA---------------------VEPVRQVFEEKASIRRVIEAEGVPY 147

Query: 187 VAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG-------AVPVKDVAKAQV 239
             +            +L      L QL        +   LG        V   DV    +
Sbjct: 148 TYLCC----HAFTGYFL----RNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTFTI 199

Query: 240 LLFESPAASGRYLC 253
                P    + + 
Sbjct: 200 RAANDPNTLNKAVH 213

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* Length = 348

 Score = 44.8 bits (107), Expect = 1e-05
 Identities = 39/146 (26%), Positives = 53/146 (36%), Gaps = 40/146 (27%)

Query: 10  ETVCVTGANGFIGTWLVKTLLDNNYTSI---NATVFPGSDSSHLFALPG----AGDANLR 62
           E V VTG  G+IG+  V  LL+  Y  +   N         S   +L       G  ++ 
Sbjct: 3   EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTG-RSVE 61

Query: 63  VFEADVLDSGAVSR--AVEGCKGVFHVASPCTLEDPVDPEKELILPAV------------ 108
             E D+LD GA+ R         V H A                L AV            
Sbjct: 62  FEEMDILDQGALQRLFKKYSFMAVIHFAG---------------LKAVGESVQKPLDYYR 106

Query: 109 ---QGTLNVLEAAKRFGVRRVVVTSS 131
               GT+ +LE  K  GV+ +V +SS
Sbjct: 107 VNLTGTIQLLEIMKAHGVKNLVFSSS 132

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346

 Score = 44.3 bits (104), Expect = 2e-05
 Identities = 20/134 (14%), Positives = 42/134 (31%), Gaps = 17/134 (12%)

Query: 1   MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDAN 60
           + S   +    V + GA GFIG ++    LD +  +           S         D  
Sbjct: 6   VPSPKGR----VLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKG 61

Query: 61  LRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKR 120
             +    + +  A+ + ++  +    V S     + +  +  L+           +A K 
Sbjct: 62  AIIVYGLINEQEAMEKILKEHEIDI-VVS-TVGGESILDQIALV-----------KAMKA 108

Query: 121 FGVRRVVVTSSISA 134
            G  +  + S    
Sbjct: 109 VGTIKRFLPSEFGH 122

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} Length = 336

 Score = 42.9 bits (102), Expect = 5e-05
 Identities = 32/121 (26%), Positives = 45/121 (37%), Gaps = 19/121 (15%)

Query: 14  VTGANGFIGTWLVKTLLDNNYTSINATVFPGSD----SSHLFALPG-AGDANLRVFEADV 68
           VTG  GFIG+  ++ +L   +           D     S+   L     D      + DV
Sbjct: 8   VTGGMGFIGSNFIRYIL-EKHPDWEVINI---DKLGYGSNPANLKDLEDDPRYTFVKGDV 63

Query: 69  LDSGAVSRAVEGCKGVFHVASPCTLEDPVD-----PEKELILPAVQGTLNVLEAAKRFGV 123
            D   V   V    GV H+A+    E  VD     PE   +   V GT  +LE+ +R   
Sbjct: 64  ADYELVKELVRKVDGVVHLAA----ESHVDRSISSPE-IFLHSNVIGTYTLLESIRRENP 118

Query: 124 R 124
            
Sbjct: 119 E 119

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score = 42.3 bits (100), Expect = 7e-05
 Identities = 32/215 (14%), Positives = 55/215 (25%), Gaps = 51/215 (23%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS-DSSHLFALPGAGDANLRVFEADVL 69
           +V VTGAN  IG  LV+ L+ +        +   + D      L    D+ + V    V 
Sbjct: 5   SVVVTGANRGIGLGLVQQLVKDKNIR---HIIATARDVEKATELKSIKDSRVHVLPLTVT 61

Query: 70  DSGAVSRAVEGCKGVFH------------VASPCTLEDPVDPEK---------------- 101
              ++   V     +              V          +                   
Sbjct: 62  CDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLT 121

Query: 102 ELILPAVQ-GTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSR 160
           + +LP ++                 V+  SS    + +       F   +          
Sbjct: 122 QKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLA---------- 171

Query: 161 KKWYPVSKT----LAEKAAWEFAEKHGVDVVAIHP 191
              Y +SK          A +  +   V VV   P
Sbjct: 172 ---YRMSKAAINMFGRTLAVDLKDD-NVLVVNFCP 202

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* Length = 397

 Score = 41.9 bits (99), Expect = 1e-04
 Identities = 25/154 (16%), Positives = 46/154 (29%), Gaps = 46/154 (29%)

Query: 11  TVCVTGANGFIGTWLVKTLL----------DNNYTSINATVFPGSDSSHLFAL------- 53
            V V G  G+IG+  V+ LL          D+   +   +    +  +    L       
Sbjct: 4   RVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPK 63

Query: 54  PGAGDANLRVFEADVLDSGAVSRAVE---GCKGVFHVASPCTLEDPVDPEKELIL----- 105
           P   D    +   DV +   ++           V H+ +              +      
Sbjct: 64  PPWADRYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCA-------------FLAVGESV 110

Query: 106 --PA------VQGTLNVLEAAKRFGVRRVVVTSS 131
             P       V G L +L+A       +++ +SS
Sbjct: 111 RDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSS 144

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321

 Score = 41.5 bits (97), Expect = 1e-04
 Identities = 23/198 (11%), Positives = 53/198 (26%), Gaps = 43/198 (21%)

Query: 10  ETVCVTGANGFIGTWLVKTLLDNNYTSINATVF--PGSDSSHLFALPGAGDANLRVFEAD 67
           E + + G  G+IG ++V+  L  ++ +        P S  S +          + + E +
Sbjct: 5   EKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGE 64

Query: 68  VLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVV 127
           + +   +   ++    V                     P +   ++++ A K  G  +  
Sbjct: 65  MEEHEKMVSVLKQVDIVISALPF---------------PMISSQIHIINAIKAAGNIKRF 109

Query: 128 VTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAA-WEFAEKHGVDV 186
           + S                              K   P    L +K       E   +  
Sbjct: 110 LPSDFGCEEDRI---------------------KPLPPFESVLEKKRIIRRAIEAAALPY 148

Query: 187 VAIHPATCLGPLMQPYLN 204
             +            ++N
Sbjct: 149 TYVSA----NCFGAYFVN 162

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} Length = 346

 Score = 41.7 bits (99), Expect = 1e-04
 Identities = 28/131 (21%), Positives = 49/131 (37%), Gaps = 35/131 (26%)

Query: 14  VTGANGFIGTWLVKTLLDN--NYTSINATVFPGSDSSHLFALPGAGD-ANLR-------- 62
           VTG  GFIG+  V  +L +   Y  IN             AL  +G+  N++        
Sbjct: 29  VTGGAGFIGSNFVHYMLQSYETYKIIN-----------FDALTYSGNLNNVKSIQDHPNY 77

Query: 63  VFE-ADVLDSGAVSRAVEGCK--GVFHVASPCTLEDPVD-----PEKELILPAVQGTLNV 114
            F   ++ +   +   ++      + + A+    E  VD     P        V GT+ +
Sbjct: 78  YFVKGEIQNGELLEHVIKERDVQVIVNFAA----ESHVDRSIENPI-PFYDTNVIGTVTL 132

Query: 115 LEAAKRFGVRR 125
           LE  K++   +
Sbjct: 133 LELVKKYPHIK 143

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score = 40.8 bits (96), Expect = 2e-04
 Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 3/78 (3%)

Query: 11 TVCVTGANGFIGTWLVKTLLDNNYT--SINATVFPGSDSSHLFALPGAGDANLRVFEADV 68
          ++ +TG N  +G  LVK LL+       +  T      +  L  L     +N+ + E D+
Sbjct: 23 SILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNH-SNIHILEIDL 81

Query: 69 LDSGAVSRAVEGCKGVFH 86
           +  A  + V   +GV  
Sbjct: 82 RNFDAYDKLVADIEGVTK 99

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 Length = 699

 Score = 41.2 bits (97), Expect = 2e-04
 Identities = 31/152 (20%), Positives = 55/152 (36%), Gaps = 40/152 (26%)

Query: 1   MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPG----A 56
              ++E   + V VTG  G+IG+  V  L++N Y  +   V     +S   ++       
Sbjct: 3   AQLQSESTSKIVLVTGGAGYIGSHTVVELIENGYDCV---VADNLSNSTYDSVARLEVLT 59

Query: 57  GDANLRVFEADVLDSGAVSR--AVEGCKGVFHVASPCTLEDPVDPEKELILPAV------ 108
              ++  +E D+ D   + +         V H A                L AV      
Sbjct: 60  K-HHIPFYEVDLCDRKGLEKVFKEYKIDSVIHFAG---------------LKAVGESTQI 103

Query: 109 ---------QGTLNVLEAAKRFGVRRVVVTSS 131
                     GT+ +LE  +++ V + V +SS
Sbjct: 104 PLRYYHNNILGTVVLLELMQQYNVSKFVFSSS 135

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score = 40.1 bits (94), Expect = 5e-04
 Identities = 22/97 (22%), Positives = 38/97 (39%), Gaps = 22/97 (22%)

Query: 59  ANLRVFEADVLDSGAVSRAVEGC------KGVFHVASPCTLEDPV----DPE--KELILP 106
           A + +   DV D   +++ +           V H A    L+D V      E   +++ P
Sbjct: 584 AEVSLQACDVADRETLAKVLASIPDEHPLTAVVHAA--GVLDDGVSESLTVERLDQVLRP 641

Query: 107 AVQGTLNVLEAAKR---FGVRRVVVTSSISAIVPNPG 140
            V G  N+LE             V+ SS+S ++ + G
Sbjct: 642 KVDGARNLLELIDPDVAL-----VLFSSVSGVLGSGG 673

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score = 38.7 bits (91), Expect = 7e-04
 Identities = 35/190 (18%), Positives = 57/190 (30%), Gaps = 36/190 (18%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVF-PGSDSSHLFALPGAGDANLRVFEADVL 69
            V +TGA G +G    + L           +   G  +  L  L  A +   R   AD+ 
Sbjct: 2   RVLITGATGGLGGAFARALKG-------HDLLLSGRRAGALAEL--AREVGARALPADLA 52

Query: 70  DSGAVSRAVEGCKGV--------FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF 121
           D       +E    +            +    E   D  +E++   +     VL+ A+  
Sbjct: 53  DELEAKALLEEAGPLDLLVHAVGKAGRAS-VREAGRDLVEEMLAAHLLTAAFVLKHARFQ 111

Query: 122 GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK 181
              R V   +    V  PG+              Y  +  K     +   E A  E    
Sbjct: 112 KGARAVFFGAYPRYVQVPGFAA------------YAAA--KGA--LEAYLEAARKELLR- 154

Query: 182 HGVDVVAIHP 191
            GV +V +  
Sbjct: 155 EGVHLVLVRL 164

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	278
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	100.0
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	100.0
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	100.0
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	100.0
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	100.0
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	100.0
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	100.0
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	100.0
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	100.0
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	100.0
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	100.0
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	100.0
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	100.0
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	100.0
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	100.0
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	100.0
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	100.0
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	100.0
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	100.0
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	100.0
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	100.0
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	100.0
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	100.0
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	100.0
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	100.0
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	100.0
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	100.0
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	100.0
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	100.0
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	100.0
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	100.0
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	100.0
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	100.0
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	100.0
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	100.0
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	100.0
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	100.0
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	100.0
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	100.0
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	100.0
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	100.0
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	100.0
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	100.0
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	100.0
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	100.0
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	100.0
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	100.0
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	100.0
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	100.0
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	100.0
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	100.0
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	100.0
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	100.0
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	100.0
4f6c_A	427	AUSA reductase domain protein; thioester reductase	100.0
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	100.0
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	100.0
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	100.0
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	100.0
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	100.0
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	100.0
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	100.0
4f6l_B	508	AUSA reductase domain protein; thioester reductase	100.0
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	100.0
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	100.0
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	100.0
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	100.0
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	100.0
1xq6_A	253	Unknown protein; structural genomics, protein stru	100.0
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	100.0
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	100.0
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	100.0
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	100.0
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	100.0
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	100.0
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.98
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.98
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.97
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.97
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.97
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.97
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.97
1spx_A	278	Short-chain reductase family member (5L265); paral	99.97
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.97
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.97
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.97
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.97
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.97
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.97
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.97
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.97
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.97
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.96
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.96
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.96
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.96
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.96
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.96
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.96
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.96
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.96
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.96
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.96
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.96
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.96
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.96
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.96
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.96
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.96
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.96
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.96
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.96
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.96
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.96
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.96
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.96
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.96
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.96
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.96
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.96
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.96
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.96
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.96
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.96
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.96
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.96
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.96
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.96
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.96
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.96
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.96
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.96
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.96
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.96
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.96
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.96
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.96
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.96
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.96
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.96
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.96
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.96
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.96
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.96
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.96
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.96
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.96
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.96
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.96
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.96
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.96
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.96
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.96
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.96
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.96
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.96
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.96
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.96
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.96
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.96
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.96
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.96
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.96
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.96
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.96
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.96
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.96
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.96
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.96
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.95
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.95
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.95
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.95
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.95
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.95
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.95
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.95
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.95
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.95
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.95
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.95
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.95
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.95
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.95
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.95
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.95
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.95
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.95
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.95
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.95
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.95
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.95
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.95
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.95
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.95
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.95
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.95
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.95
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.95
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.95
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.95
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.95
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.95
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.95
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.95
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.95
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.95
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.95
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.95
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.95
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.95
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.95
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.95
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.95
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.95
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.95
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.95
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.95
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.95
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.95
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.95
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.95
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.95
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.95
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.95
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.95
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.95
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.95
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.95
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.95
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.95
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.95
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.95
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.95
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.95
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.95
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.95
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.95
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.95
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.95
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.95
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.95
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.95
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.95
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.95
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.95
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.95
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.95
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.95
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.94
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.94
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.94
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.94
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.94
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.94
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.94
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.94
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.94
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.94
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.94
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.94
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.94
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.94
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.94
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.94
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.94
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.94
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.94
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.94
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.94
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.94
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.94
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.94
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.94
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.94
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.94
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.94
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.94
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.94
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.94
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.94
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.93
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.93
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.93
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.93
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.93
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.92
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.92
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.92
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.91
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.91
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.91
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.91
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.91
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.9
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.9
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.9
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.88
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.88
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.88
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.87
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.87
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.85
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.83
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.81
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.79
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.78
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.77
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.76
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.76
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.75
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.74
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.73
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.58
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.57
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.43
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	99.35
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	99.22
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.15
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	99.15
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.09
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	99.06
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	99.05
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	99.01
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.95
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.8
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.8
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.78
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.78
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.77
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	98.69
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.62
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	98.6
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	98.6
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.44
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	98.39
3c85_A	183	Putative glutathione-regulated potassium-efflux S	98.38
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.34
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	98.32
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	98.27
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	98.26
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	98.25
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	98.25
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	98.19
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.14
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	98.12
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.12
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	98.09
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.08
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	98.05
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.03
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	97.98
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.98
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	97.96
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	97.95
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	97.94
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	97.93
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.9
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	97.89
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	97.87
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	97.87
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	97.87
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.82
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	97.82
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	97.82
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	97.78
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.76
4g65_A	461	TRK system potassium uptake protein TRKA; structur	97.76
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	97.76
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.76
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	97.75
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	97.74
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.73
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	97.73
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.72
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	97.68
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	97.67
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	97.67
3tl2_A	315	Malate dehydrogenase; center for structural genomi	97.66
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.66
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.65
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	97.63
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	97.62
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	97.62
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.6
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	97.6
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.59
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	97.58
1ys4_A	354	Aspartate-semialdehyde dehydrogenase; oxidoreducta	97.58
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	97.58
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	97.57
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	97.56
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.55
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.54
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	97.53
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.53
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	97.53
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.53
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	97.53
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	97.53
3q2o_A	389	Phosphoribosylaminoimidazole carboxylase, ATPase;	97.51
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	97.51
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.51
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	97.51
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	97.5
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	97.49
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	97.48
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	97.48
4dpl_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	97.47
4dpk_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	97.47
2r00_A	336	Aspartate-semialdehyde dehydrogenase; conformation	97.44
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	97.44
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.42
1lnq_A	336	MTHK channels, potassium channel related protein;	97.41
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	97.39
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.39
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	97.37
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.35
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	97.32
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.31
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	97.28
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	97.28
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.28
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	97.26
3pwk_A	366	Aspartate-semialdehyde dehydrogenase; NADP binding	97.26
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.25
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	97.25
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	97.24
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	97.23
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	97.22
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	97.2
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	97.2
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.2
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	97.2
3ax6_A	380	Phosphoribosylaminoimidazole carboxylase, ATPase;	97.19
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	97.19
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.19
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.18
4g65_A	461	TRK system potassium uptake protein TRKA; structur	97.18
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.18
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.18
4ffl_A	363	PYLC; amino acid, biosynthesis of pyrrolysine, iso	97.15
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	97.15
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	97.14
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	97.14
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	97.13
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	97.13
3ijp_A	288	DHPR, dihydrodipicolinate reductase; ssgcid, SBRI,	97.13
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	97.12
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	97.11
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	97.11
2ep5_A	350	350AA long hypothetical aspartate-semialdehyde deh	97.11
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.11
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	97.1
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.1
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	97.09
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	97.08
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	97.07
3pzr_A	370	Aspartate-semialdehyde dehydrogenase; NADP, oxidor	97.07
3tz6_A	344	Aspartate-semialdehyde dehydrogenase; asadh, ASD,	97.07
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	97.06
2i6t_A	303	Ubiquitin-conjugating enzyme E2-like isoform A; L-	97.05
3k5i_A	403	Phosphoribosyl-aminoimidazole carboxylase; purine	97.05
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.04
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.04
1oi7_A	288	Succinyl-COA synthetase alpha chain; SCS, ligase,	97.03
1y81_A	138	Conserved hypothetical protein; hyperthermophIle,	97.03
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	97.02
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	97.02
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	97.02
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	97.02
1t4b_A	367	Aspartate-semialdehyde dehydrogenase; asadh, HOSR,	97.01
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	96.99
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	96.98
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	96.98
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	96.98
3uw3_A	377	Aspartate-semialdehyde dehydrogenase; structural g	96.97
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	96.96
3qsg_A	312	NAD-binding phosphogluconate dehydrogenase-like P;	96.95
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.95
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.95
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	96.94
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	96.92
3hsk_A	381	Aspartate-semialdehyde dehydrogenase; candida albi	96.92
2o3j_A	481	UDP-glucose 6-dehydrogenase; structural genomics,	96.9
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	96.9
3qy9_A	243	DHPR, dihydrodipicolinate reductase; rossmann fold	96.9
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	96.89
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	96.89
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	96.85
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	96.85
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.82
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	96.82
1yb4_A	295	Tartronic semialdehyde reductase; structural genom	96.81
4gx0_A	565	TRKA domain protein; membrane protein, ION channel	96.8
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	96.8
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	96.8
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	96.79
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	96.79
3hg7_A	324	D-isomer specific 2-hydroxyacid dehydrogenase FAM	96.79

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=100.00  E-value=8.3e-42  Score=289.61  Aligned_cols=259  Identities=16%  Similarity=0.165  Sum_probs=202.7

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCC-CeEEEEecCCCC--CcccccCCCCCCCceEEEEccCCChhhHHHHhcC
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSD--SSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG   80 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~--~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~   80 (278)
                      |+..+||+|||||||||||++|+++|+++|+ ..|++.+|....  ...+..+..  ..+++++.+|++|++++.+++++
T Consensus        19 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~   96 (346)
T 4egb_A           19 YFQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQD--HPNYYFVKGEIQNGELLEHVIKE   96 (346)
T ss_dssp             -----CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTT--CTTEEEEECCTTCHHHHHHHHHH
T ss_pred             ccccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhcc--CCCeEEEEcCCCCHHHHHHHHhh
Confidence            4456689999999999999999999999993 177777775422  222222211  12899999999999999999987


Q ss_pred             --ccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhh
Q 023689           81 --CKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCK  158 (278)
Q Consensus        81 --~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~  158 (278)
                        +|+|||+|+.........++...+++|+.++.+++++|++.++++||++||.+++.....  ..+++|+++..|.   
T Consensus        97 ~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~~--~~~~~E~~~~~p~---  171 (346)
T 4egb_A           97 RDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGK--TGRFTEETPLAPN---  171 (346)
T ss_dssp             HTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCCS--SCCBCTTSCCCCC---
T ss_pred             cCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCCc--CCCcCCCCCCCCC---
Confidence              999999999876655556778999999999999999999999999999999765544322  3678888876553   


Q ss_pred             ccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcc---cccccCcccHHHHH
Q 023689          159 SRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ---EYHWLGAVPVKDVA  235 (278)
Q Consensus       159 ~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~D~a  235 (278)
                         +.|+.+|.++|.+++.+++++|++++++||+.+||+..... ..+..++.....+.+...   +.+.++++|++|+|
T Consensus       172 ---~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  247 (346)
T 4egb_A          172 ---SPYSSSKASADMIALAYYKTYQLPVIVTRCSNNYGPYQYPE-KLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHC  247 (346)
T ss_dssp             ---SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT-SHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHH
T ss_pred             ---ChhHHHHHHHHHHHHHHHHHhCCCEEEEeecceeCcCCCcc-chHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHH
Confidence               78999999999999999988899999999999999987543 456777888888877654   34789999999999


Q ss_pred             HHHHhhhcCCCCCceEEec-CccccHHHHHHHHHHhCCC
Q 023689          236 KAQVLLFESPAASGRYLCT-NGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~i~~~~~~  273 (278)
                      ++++.+++++..+++|+++ ++.+++.|+++.+.+.++.
T Consensus       248 ~a~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~  286 (346)
T 4egb_A          248 SAIDVVLHKGRVGEVYNIGGNNEKTNVEVVEQIITLLGK  286 (346)
T ss_dssp             HHHHHHHHHCCTTCEEEECCSCCEEHHHHHHHHHHHHTC
T ss_pred             HHHHHHHhcCCCCCEEEECCCCceeHHHHHHHHHHHhCC
Confidence            9999999987755578655 5679999999999998864

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=100.00  E-value=1.6e-40  Score=277.67  Aligned_cols=240  Identities=17%  Similarity=0.177  Sum_probs=201.8

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEec
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a   88 (278)
                      ||+|||||||||||++|+++|+++|+ +|++++|++.... +.        +++++.+|++ ++++.++++++|+|||+|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~-~~--------~~~~~~~Dl~-~~~~~~~~~~~d~Vih~a   70 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGN-TPIILTRSIGNKA-IN--------DYEYRVSDYT-LEDLINQLNDVDAVVHLA   70 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCC--------------CCEEEECCCC-HHHHHHHTTTCSEEEECC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCCCCccc-CC--------ceEEEEcccc-HHHHHHhhcCCCEEEEcc
Confidence            47999999999999999999999999 9999999843322 21        7889999999 999999999999999999


Q ss_pred             ccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhhHH
Q 023689           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK  168 (278)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK  168 (278)
                      +.....    ++...+++|+.++.+++++|++.++++||++||.+++ +...  ..+++|+++..|.      +.|+.+|
T Consensus        71 ~~~~~~----~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vy-g~~~--~~~~~E~~~~~p~------~~Y~~sK  137 (311)
T 3m2p_A           71 ATRGSQ----GKISEFHDNEILTQNLYDACYENNISNIVYASTISAY-SDET--SLPWNEKELPLPD------LMYGVSK  137 (311)
T ss_dssp             CCCCSS----SCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGC-CCGG--GCSBCTTSCCCCS------SHHHHHH
T ss_pred             ccCCCC----ChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHh-CCCC--CCCCCCCCCCCCC------chhHHHH
Confidence            976642    5678999999999999999999999999999995554 4332  2678888876553      7899999


Q ss_pred             HHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcc---cccccCcccHHHHHHHHHhhhcCC
Q 023689          169 TLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ---EYHWLGAVPVKDVAKAQVLLFESP  245 (278)
Q Consensus       169 ~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~D~a~~~~~~~~~~  245 (278)
                      .++|++++.++++++++++++||+.+||+..... .....++.....+.+...   +++.++++|++|+|++++.+++++
T Consensus       138 ~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~  216 (311)
T 3m2p_A          138 LACEHIGNIYSRKKGLCIKNLRFAHLYGFNEKNN-YMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQE  216 (311)
T ss_dssp             HHHHHHHHHHHHHSCCEEEEEEECEEECSCC--C-CHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCT
T ss_pred             HHHHHHHHHHHHHcCCCEEEEeeCceeCcCCCCC-CHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcC
Confidence            9999999999988999999999999999987654 456777888888877655   457899999999999999999987


Q ss_pred             CCCceEEe-cCccccHHHHHHHHHHhCCC
Q 023689          246 AASGRYLC-TNGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       246 ~~~~~~~~-~~~~~s~~e~~~~i~~~~~~  273 (278)
                      ..+++|++ +++.+|+.|+++.+.+.++.
T Consensus       217 ~~~~~~~i~~~~~~s~~e~~~~i~~~~g~  245 (311)
T 3m2p_A          217 KVSGTFNIGSGDALTNYEVANTINNAFGN  245 (311)
T ss_dssp             TCCEEEEECCSCEECHHHHHHHHHHHTTC
T ss_pred             CCCCeEEeCCCCcccHHHHHHHHHHHhCC
Confidence            65567755 57889999999999999864

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=100.00  E-value=2.7e-41  Score=286.99  Aligned_cols=257  Identities=18%  Similarity=0.147  Sum_probs=207.3

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcc-cccCCCCC----CCceEEEEccCCChhhHHHHhcCc
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSH-LFALPGAG----DANLRVFEADVLDSGAVSRAVEGC   81 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~-~~~~~~~~----~~~v~~~~~Dl~d~~~~~~~~~~~   81 (278)
                      .++|+|||||||||||++|+++|+++|+ .|++++|+...... +..+....    ..+++++.+|++|++++.++++++
T Consensus        23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~  101 (351)
T 3ruf_A           23 FSPKTWLITGVAGFIGSNLLEKLLKLNQ-VVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGV  101 (351)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTC
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCC
Confidence            3568999999999999999999999999 99999997654321 11110000    018999999999999999999999


Q ss_pred             cEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccC
Q 023689           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRK  161 (278)
Q Consensus        82 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  161 (278)
                      |+|||+|+.........++...+++|+.++.+++++|++.++++|||+||.+++....   ..+++|+++..+.      
T Consensus       102 d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~---~~~~~E~~~~~p~------  172 (351)
T 3ruf_A          102 DHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHP---ALPKVEENIGNPL------  172 (351)
T ss_dssp             SEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCC---CSSBCTTCCCCCC------
T ss_pred             CEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCC---CCCCccCCCCCCC------
Confidence            9999999975443333456788999999999999999999999999999976544332   3678888876553      


Q ss_pred             chhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCC---CchhHHHHHHHhhCCCCcc---cccccCcccHHHHH
Q 023689          162 KWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY---LNASCAVLQQLLQGSKDTQ---EYHWLGAVPVKDVA  235 (278)
Q Consensus       162 ~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~---~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~D~a  235 (278)
                      +.|+.+|.++|.+++.+++++|++++++||+.+||+.....   ...+..++.....+.+...   +++.++++|++|+|
T Consensus       173 ~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva  252 (351)
T 3ruf_A          173 SPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVI  252 (351)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHH
Confidence            78999999999999999988899999999999999986543   2456777888888887655   34789999999999


Q ss_pred             HHHHhhhcCC-C-CCceEEe-cCccccHHHHHHHHHHhCCC
Q 023689          236 KAQVLLFESP-A-ASGRYLC-TNGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       236 ~~~~~~~~~~-~-~~~~~~~-~~~~~s~~e~~~~i~~~~~~  273 (278)
                      ++++.++.+. . .+++|++ +++.+|+.|+++.+.+.++.
T Consensus       253 ~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~  293 (351)
T 3ruf_A          253 QMNILSALAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNL  293 (351)
T ss_dssp             HHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHT
T ss_pred             HHHHHHHhhccccCCCEEEeCCCCcccHHHHHHHHHHHhCc
Confidence            9999998872 3 3457755 57789999999999998854

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=100.00  E-value=1.9e-40  Score=277.58  Aligned_cols=245  Identities=18%  Similarity=0.183  Sum_probs=198.1

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEec
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a   88 (278)
                      ||+|||||||||||++|+++|+++|+ .|.+..++........       .+++++.+|++| +++.++++++|+|||+|
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g~-~v~~~~~~~~~~~~~~-------~~~~~~~~Dl~~-~~~~~~~~~~d~vih~a   71 (313)
T 3ehe_A            1 MSLIVVTGGAGFIGSHVVDKLSESNE-IVVIDNLSSGNEEFVN-------EAARLVKADLAA-DDIKDYLKGAEEVWHIA   71 (313)
T ss_dssp             --CEEEETTTSHHHHHHHHHHTTTSC-EEEECCCSSCCGGGSC-------TTEEEECCCTTT-SCCHHHHTTCSEEEECC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCC-EEEEEcCCCCChhhcC-------CCcEEEECcCCh-HHHHHHhcCCCEEEECC
Confidence            57999999999999999999999996 6666555544333221       178999999999 89999999999999999


Q ss_pred             ccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhhHH
Q 023689           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK  168 (278)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK  168 (278)
                      +.........++...+++|+.++.+++++|++.++++||++||.+++.. ..  ..+++|+.+..+.      +.|+.+|
T Consensus        72 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~-~~--~~~~~E~~~~~~~------~~Y~~sK  142 (313)
T 3ehe_A           72 ANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGE-AK--VIPTPEDYPTHPI------SLYGASK  142 (313)
T ss_dssp             CCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCS-CS--SSSBCTTSCCCCC------SHHHHHH
T ss_pred             CCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCc-CC--CCCCCCCCCCCCC------CHHHHHH
Confidence            9765555567889999999999999999999999999999999665543 32  3678887765543      6899999


Q ss_pred             HHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCC-CC-cc--cccccCcccHHHHHHHHHhhhcC
Q 023689          169 TLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGS-KD-TQ--EYHWLGAVPVKDVAKAQVLLFES  244 (278)
Q Consensus       169 ~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~-~~-~~--~~~~~~~i~~~D~a~~~~~~~~~  244 (278)
                      .++|.+++.+++++|++++++||+.+||+....  ..+..++.+...+. +. ..  +++.++++|++|+|++++.+++.
T Consensus       143 ~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~  220 (313)
T 3ehe_A          143 LACEALIESYCHTFDMQAWIYRFANVIGRRSTH--GVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRG  220 (313)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEEECSCEESTTCCC--SHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHhcCCCEEEEeeccccCcCCCc--ChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhcc
Confidence            999999999999999999999999999998654  35666677766663 32 22  44789999999999999999985


Q ss_pred             CCCCceEEec-CccccHHHHHHHHHHhCCC
Q 023689          245 PAASGRYLCT-NGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       245 ~~~~~~~~~~-~~~~s~~e~~~~i~~~~~~  273 (278)
                      ...+++|+++ ++.+|+.|+++.+.+.++.
T Consensus       221 ~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~  250 (313)
T 3ehe_A          221 DERVNIFNIGSEDQIKVKRIAEIVCEELGL  250 (313)
T ss_dssp             CSSEEEEECCCSCCEEHHHHHHHHHHHTTC
T ss_pred             CCCCceEEECCCCCeeHHHHHHHHHHHhCC
Confidence            5555678655 6789999999999999853

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=100.00  E-value=2.2e-40  Score=278.06  Aligned_cols=265  Identities=37%  Similarity=0.605  Sum_probs=194.0

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEec-CCCC---CcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVF-PGSD---SSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r-~~~~---~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~v   84 (278)
                      +|+|||||||||||++|+++|+++|+ +|+++.| +++.   ...+..+.... .+++++.+|++|++++.++++++|+|
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~~~d~v   78 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGY-SVNTTIRADPERKRDVSFLTNLPGAS-EKLHFFNADLSNPDSFAAAIEGCVGI   78 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEECCCC----CCCHHHHTSTTHH-HHEEECCCCTTCGGGGHHHHTTCSEE
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCC-EEEEEEeCCccchhHHHHHHhhhccC-CceEEEecCCCCHHHHHHHHcCCCEE
Confidence            47999999999999999999999999 8988887 5432   11111121101 15789999999999999999999999


Q ss_pred             EEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhc-CCCEEEEecceeeeecCCCCCCccccCCCCCchhhhh--ccC
Q 023689           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCK--SRK  161 (278)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~--~~~  161 (278)
                      ||+|+.... ...+.+...+++|+.|+.+++++|++. ++++||++||.+++++.+.. ..+++|+++....+..  .+.
T Consensus        79 ih~A~~~~~-~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~p~  156 (322)
T 2p4h_X           79 FHTASPIDF-AVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKD-KDVLDESDWSDVDLLRSVKPF  156 (322)
T ss_dssp             EECCCCC---------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSC-CSEECTTCCCCHHHHHHHCCT
T ss_pred             EEcCCcccC-CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCC-CeecCCccccchhhhcccCcc
Confidence            999975321 112224568999999999999999988 78999999998876654332 3567887765443311  112


Q ss_pred             c-hhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHHHHHHHHHh
Q 023689          162 K-WYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVL  240 (278)
Q Consensus       162 ~-~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  240 (278)
                      . .|+.||.++|.++.++++++|++++++||+.+||+............+.....+.+...+....+++|++|+|++++.
T Consensus       157 ~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~a~~~  236 (322)
T 2p4h_X          157 GWNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVTRFHMVHVDDVARAHIY  236 (322)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGGCCEEEEEEEEHHHHHHHHHH
T ss_pred             cccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCccCcCCCcCEEEHHHHHHHHHH
Confidence            2 699999999999999887789999999999999997654322111122223445433333333489999999999999


Q ss_pred             hhcCCCCCceEEecCccccHHHHHHHHHHhCCCCCCC
Q 023689          241 LFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVH  277 (278)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~p  277 (278)
                      +++++...|.|+++++.+|+.|+++.+.+.+|..++|
T Consensus       237 ~~~~~~~~g~~~~~~~~~s~~e~~~~i~~~~~~~~~~  273 (322)
T 2p4h_X          237 LLENSVPGGRYNCSPFIVPIEEMSQLLSAKYPEYQIL  273 (322)
T ss_dssp             HHHSCCCCEEEECCCEEEEHHHHHHHHHHHCTTSCCC
T ss_pred             HhhCcCCCCCEEEcCCCCCHHHHHHHHHHhCCCCCCC
Confidence            9987655677888888999999999999988765554

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=100.00  E-value=8.4e-41  Score=286.14  Aligned_cols=259  Identities=17%  Similarity=0.285  Sum_probs=204.6

Q ss_pred             cccccCCceEEEeCcchhhHHHHHHHHHHC-CCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCC-ChhhHHHHhcC
Q 023689            3 SEAEKEEETVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVL-DSGAVSRAVEG   80 (278)
Q Consensus         3 ~m~~~~~~~vlItGatG~iG~~l~~~L~~~-g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~-d~~~~~~~~~~   80 (278)
                      .|..++||+|||||||||||++|+++|+++ |+ +|++++|+.+....+...     .+++++.+|++ |.+.+.+++++
T Consensus        18 ~~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~-----~~v~~~~~Dl~~d~~~~~~~~~~   91 (372)
T 3slg_A           18 GPGSMKAKKVLILGVNGFIGHHLSKRILETTDW-EVFGMDMQTDRLGDLVKH-----ERMHFFEGDITINKEWVEYHVKK   91 (372)
T ss_dssp             -----CCCEEEEESCSSHHHHHHHHHHHHHSSC-EEEEEESCCTTTGGGGGS-----TTEEEEECCTTTCHHHHHHHHHH
T ss_pred             CCcccCCCEEEEECCCChHHHHHHHHHHhCCCC-EEEEEeCChhhhhhhccC-----CCeEEEeCccCCCHHHHHHHhcc
Confidence            345566899999999999999999999998 88 999999987665444321     18999999999 99999999999


Q ss_pred             ccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchh-hhhc
Q 023689           81 CKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLE-YCKS  159 (278)
Q Consensus        81 ~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~-~~~~  159 (278)
                      +|+|||+|+......+..++...+++|+.++.+++++|++.+ ++|||+||.++ |+...  ..+++|++++... +...
T Consensus        92 ~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS~~v-yg~~~--~~~~~e~~~~~~~~p~~~  167 (372)
T 3slg_A           92 CDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEV-YGMCA--DEQFDPDASALTYGPINK  167 (372)
T ss_dssp             CSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECCGGG-GBSCC--CSSBCTTTCCEEECCTTC
T ss_pred             CCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCcHHH-hCCCC--CCCCCccccccccCCCCC
Confidence            999999999765432334567889999999999999999999 99999999554 44433  2567777654211 1112


Q ss_pred             cCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCC-------CCchhHHHHHHHhhCCCCcc---cccccCcc
Q 023689          160 RKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQP-------YLNASCAVLQQLLQGSKDTQ---EYHWLGAV  229 (278)
Q Consensus       160 ~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~-------~~~~~~~~~~~~~~~~~~~~---~~~~~~~i  229 (278)
                      +.+.|+.+|.++|++++.++++ +++++++||+.+||+....       ....+..++.....+.+...   +++.++++
T Consensus       168 p~~~Y~~sK~~~E~~~~~~~~~-g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i  246 (372)
T 3slg_A          168 PRWIYACSKQLMDRVIWGYGME-GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFT  246 (372)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHTT-TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECE
T ss_pred             CCCcHHHHHHHHHHHHHHHHHC-CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEE
Confidence            3358999999999999999877 9999999999999998653       12356777888888877654   35789999


Q ss_pred             cHHHHHHHHHhhhcCCC---CCceEEecC--ccccHHHHHHHHHHhCC
Q 023689          230 PVKDVAKAQVLLFESPA---ASGRYLCTN--GIYQFGDFAERVSKLFP  272 (278)
Q Consensus       230 ~~~D~a~~~~~~~~~~~---~~~~~~~~~--~~~s~~e~~~~i~~~~~  272 (278)
                      |++|+|++++.+++++.   .+++|++++  +.+|+.|+++.+.+.++
T Consensus       247 ~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g  294 (372)
T 3slg_A          247 YVDDGISALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAA  294 (372)
T ss_dssp             EHHHHHHHHHHHHHCGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHHH
T ss_pred             EHHHHHHHHHHHHhcccCcCCCceEEeCCCCCCccHHHHHHHHHHHhC
Confidence            99999999999999874   345786655  58999999999998874

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=100.00  E-value=4.8e-40  Score=277.84  Aligned_cols=266  Identities=36%  Similarity=0.680  Sum_probs=196.6

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc---cCCCCCCCceEEEEccCCChhhHHHHhcCccEE
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF---ALPGAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~---~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~v   84 (278)
                      ++|+|||||||||||++|+++|+++|+ +|++++|+.+......   .+.... .+++++++|++|++++.++++++|+|
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~~~d~V   81 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGY-TVRATVRDPTNVKKVKHLLDLPKAE-THLTLWKADLADEGSFDEAIKGCTGV   81 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCTTCHHHHHHHHTSTTHH-HHEEEEECCTTSTTTTHHHHTTCSEE
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCC-EEEEEECCcchhHHHHHHHhcccCC-CeEEEEEcCCCCHHHHHHHHcCCCEE
Confidence            568999999999999999999999999 8998888765322111   111100 16889999999999999999999999


Q ss_pred             EEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcC-CCEEEEecceeeeecCCCCCCccccCCCCCchhhh---hcc
Q 023689           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYC---KSR  160 (278)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~---~~~  160 (278)
                      ||+|+.... ...+.....+++|+.|+.+++++|++.+ +++||++||.+++++.... ..+++|+++....+.   ..+
T Consensus        82 ih~A~~~~~-~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~-~~~~~E~~~~~~~~~~~~~~~  159 (337)
T 2c29_D           82 FHVATPMDF-ESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQ-LPVYDESCWSDMEFCRAKKMT  159 (337)
T ss_dssp             EECCCCCCS-SCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSC-CSEECTTCCCCHHHHHHHCCT
T ss_pred             EEeccccCC-CCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCC-CcccCcccCCchhhhcccCCc
Confidence            999986532 1123344689999999999999999887 8999999998877764332 346788776543221   113


Q ss_pred             CchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccc-cccCcccHHHHHHHHH
Q 023689          161 KKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY-HWLGAVPVKDVAKAQV  239 (278)
Q Consensus       161 ~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~D~a~~~~  239 (278)
                      ...|+.+|.++|.++..+++++|++++++||+++|||..................|.+..... ...+++|++|+|++++
T Consensus       160 ~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~v~Dva~a~~  239 (337)
T 2c29_D          160 AWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDDLCNAHI  239 (337)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGGGHHHHTEEEEEEHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCccccccCCCCEEEHHHHHHHHH
Confidence            357999999999999998877899999999999999986543211111111123343322211 2345999999999999


Q ss_pred             hhhcCCCCCceEEecCccccHHHHHHHHHHhCCCCCCC
Q 023689          240 LLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVH  277 (278)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~p  277 (278)
                      .+++++...++|+++++.+++.|+++.+.+.+|..++|
T Consensus       240 ~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~  277 (337)
T 2c29_D          240 YLFENPKAEGRYICSSHDCIILDLAKMLREKYPEYNIP  277 (337)
T ss_dssp             HHHHCTTCCEEEEECCEEEEHHHHHHHHHHHCTTSCCC
T ss_pred             HHhcCcccCceEEEeCCCCCHHHHHHHHHHHCCCccCC
Confidence            99987666678888888899999999999998765444

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=100.00  E-value=1.5e-39  Score=275.17  Aligned_cols=251  Identities=21%  Similarity=0.205  Sum_probs=192.9

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      ..+|+|||||||||||++|+++|+++|+ +|++++|++.....+..      .+++++.+|++|++++.++++++|+|||
T Consensus        11 ~~~M~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~------~~~~~~~~Dl~d~~~~~~~~~~~d~vih   83 (342)
T 2x4g_A           11 GAHVKYAVLGATGLLGHHAARAIRAAGH-DLVLIHRPSSQIQRLAY------LEPECRVAEMLDHAGLERALRGLDGVIF   83 (342)
T ss_dssp             -CCCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECTTSCGGGGGG------GCCEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred             ccCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEecChHhhhhhcc------CCeEEEEecCCCHHHHHHHHcCCCEEEE
Confidence            3457999999999999999999999999 99999998765443322      1788999999999999999999999999


Q ss_pred             ecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhh
Q 023689           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPV  166 (278)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~  166 (278)
                      +|+....  +..++...+++|+.++.+++++|++.++++||++||.+++...... ..+ +|+++..|..  ...+.|+.
T Consensus        84 ~a~~~~~--~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~-~~~-~E~~~~~p~~--~~~~~Y~~  157 (342)
T 2x4g_A           84 SAGYYPS--RPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQG-LPG-HEGLFYDSLP--SGKSSYVL  157 (342)
T ss_dssp             C--------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTTS-SCB-CTTCCCSSCC--TTSCHHHH
T ss_pred             CCccCcC--CCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCCC-CCC-CCCCCCCccc--cccChHHH
Confidence            9986542  3456788999999999999999999999999999997765443321 133 7877655410  01368999


Q ss_pred             HHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHHHHHHHHHhhhcCCC
Q 023689          167 SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA  246 (278)
Q Consensus       167 sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~  246 (278)
                      +|..+|.+++.++++ |++++++||+.+||+..... . ...++.....+.+...+++.++++|++|+|++++.+++++.
T Consensus       158 sK~~~e~~~~~~~~~-g~~~~ilrp~~v~g~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~  234 (342)
T 2x4g_A          158 CKWALDEQAREQARN-GLPVVIGIPGMVLGELDIGP-T-TGRVITAIGNGEMTHYVAGQRNVIDAAEAGRGLLMALERGR  234 (342)
T ss_dssp             HHHHHHHHHHHHHHT-TCCEEEEEECEEECSCCSSC-S-TTHHHHHHHTTCCCEEECCEEEEEEHHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHHhhc-CCcEEEEeCCceECCCCccc-c-HHHHHHHHHcCCCccccCCCcceeeHHHHHHHHHHHHhCCC
Confidence            999999999998877 99999999999999976211 1 34556666677655446678999999999999999998766


Q ss_pred             CCceEEecCccccHHHHHHHHHHhCCC
Q 023689          247 ASGRYLCTNGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       247 ~~~~~~~~~~~~s~~e~~~~i~~~~~~  273 (278)
                      .+++|+++++.+|+.|+++.+.+.++.
T Consensus       235 ~g~~~~v~~~~~s~~e~~~~i~~~~g~  261 (342)
T 2x4g_A          235 IGERYLLTGHNLEMADLTRRIAELLGQ  261 (342)
T ss_dssp             TTCEEEECCEEEEHHHHHHHHHHHHTC
T ss_pred             CCceEEEcCCcccHHHHHHHHHHHhCC
Confidence            555786654449999999999998753

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=100.00  E-value=7.8e-40  Score=279.15  Aligned_cols=255  Identities=17%  Similarity=0.117  Sum_probs=203.5

Q ss_pred             Ccccc-ccCCceEEEeCcchhhHHHHHHHHHH--CCCCeEEEEecCCCCC-------cccccCCCCCCCceEEEEccCCC
Q 023689            1 MASEA-EKEEETVCVTGANGFIGTWLVKTLLD--NNYTSINATVFPGSDS-------SHLFALPGAGDANLRVFEADVLD   70 (278)
Q Consensus         1 m~~m~-~~~~~~vlItGatG~iG~~l~~~L~~--~g~~~v~~~~r~~~~~-------~~~~~~~~~~~~~v~~~~~Dl~d   70 (278)
                      |..|. .++||+|||||||||||++|+++|++  .|+ +|++++|+....       +.+.........++.++.+|++|
T Consensus         1 M~~~~~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d   79 (362)
T 3sxp_A            1 MRYIDDELENQTILITGGAGFVGSNLAFHFQENHPKA-KVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINN   79 (362)
T ss_dssp             CCSSSCCCTTCEEEEETTTSHHHHHHHHHHHHHCTTS-EEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTC
T ss_pred             CcccchhcCCCEEEEECCCCHHHHHHHHHHHhhCCCC-eEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCC
Confidence            54443 56789999999999999999999999  899 999999866411       11111111112267999999999


Q ss_pred             hhhHHHH-hcCccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCC
Q 023689           71 SGAVSRA-VEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (278)
Q Consensus        71 ~~~~~~~-~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~  149 (278)
                      ++++.++ ..++|+|||+|+....  ...++...+++|+.++.+++++|++.+++ ||++||.++ |+...   .+++|+
T Consensus        80 ~~~~~~~~~~~~D~vih~A~~~~~--~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS~~v-yg~~~---~~~~E~  152 (362)
T 3sxp_A           80 PLDLRRLEKLHFDYLFHQAAVSDT--TMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASSAGV-YGNTK---APNVVG  152 (362)
T ss_dssp             HHHHHHHTTSCCSEEEECCCCCGG--GCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEEGGG-GCSCC---SSBCTT
T ss_pred             HHHHHHhhccCCCEEEECCccCCc--cccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCcHHH-hCCCC---CCCCCC
Confidence            9999999 8899999999996543  45678899999999999999999999876 999999554 44332   378888


Q ss_pred             CCCchhhhhccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCC---CchhHHHHHHHhhCCCCcc---cc
Q 023689          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY---LNASCAVLQQLLQGSKDTQ---EY  223 (278)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~---~~~~~~~~~~~~~~~~~~~---~~  223 (278)
                      ++..|.      +.|+.+|.++|.+++.++.+  ++++++||+++|||.....   ...+..++.....+.+...   +.
T Consensus       153 ~~~~p~------~~Y~~sK~~~E~~~~~~~~~--~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  224 (362)
T 3sxp_A          153 KNESPE------NVYGFSKLCMDEFVLSHSND--NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGE  224 (362)
T ss_dssp             SCCCCS------SHHHHHHHHHHHHHHHTTTT--SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGC
T ss_pred             CCCCCC------ChhHHHHHHHHHHHHHHhcc--CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCC
Confidence            866553      78999999999999987655  9999999999999987543   2456777778877776544   34


Q ss_pred             cccCcccHHHHHHHHHhhhcCCCCCceEEe-cCccccHHHHHHHHHHhCC
Q 023689          224 HWLGAVPVKDVAKAQVLLFESPAASGRYLC-TNGIYQFGDFAERVSKLFP  272 (278)
Q Consensus       224 ~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~-~~~~~s~~e~~~~i~~~~~  272 (278)
                      +.++++|++|+|++++.+++++.. |+|++ +++.+++.|+++.+.+.++
T Consensus       225 ~~~~~i~v~Dva~ai~~~~~~~~~-g~~~i~~~~~~s~~e~~~~i~~~~g  273 (362)
T 3sxp_A          225 QLRDFVYIEDVIQANVKAMKAQKS-GVYNVGYSQARSYNEIVSILKEHLG  273 (362)
T ss_dssp             CEEECEEHHHHHHHHHHHTTCSSC-EEEEESCSCEEEHHHHHHHHHHHHC
T ss_pred             eEEccEEHHHHHHHHHHHHhcCCC-CEEEeCCCCCccHHHHHHHHHHHcC
Confidence            789999999999999999987754 58865 5778999999999999986

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=100.00  E-value=9.4e-40  Score=273.14  Aligned_cols=243  Identities=21%  Similarity=0.214  Sum_probs=198.4

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEecc
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a~   89 (278)
                      |+|||||||||||++|+++|+++|+ +|++++|+.........      .+++++.+|++|.+ +.+++++ |+|||+|+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~------~~~~~~~~Dl~d~~-~~~~~~~-d~vih~A~   71 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGY-EVVVVDNLSSGRREFVN------PSAELHVRDLKDYS-WGAGIKG-DVVFHFAA   71 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCCSSCCGGGSC------TTSEEECCCTTSTT-TTTTCCC-SEEEECCS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCC-EEEEEeCCCCCchhhcC------CCceEEECccccHH-HHhhcCC-CEEEECCC
Confidence            5899999999999999999999999 89999887655433221      17899999999999 8888888 99999999


Q ss_pred             cCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhhHHH
Q 023689           90 PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKT  169 (278)
Q Consensus        90 ~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~  169 (278)
                      .........++...+++|+.++.+++++|++.++++||++||.+++.. ..  ..+++|+.+..+.      +.|+.+|.
T Consensus        72 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~-~~--~~~~~e~~~~~p~------~~Y~~sK~  142 (312)
T 3ko8_A           72 NPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGD-AD--VIPTPEEEPYKPI------SVYGAAKA  142 (312)
T ss_dssp             SCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCS-CS--SSSBCTTSCCCCC------SHHHHHHH
T ss_pred             CCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCC-CC--CCCCCCCCCCCCC------ChHHHHHH
Confidence            765555566788999999999999999999999999999999666543 32  3678888765553      78999999


Q ss_pred             HHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCC--cc--cccccCcccHHHHHHHHHhhhcC-
Q 023689          170 LAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKD--TQ--EYHWLGAVPVKDVAKAQVLLFES-  244 (278)
Q Consensus       170 ~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~i~~~D~a~~~~~~~~~-  244 (278)
                      ++|.+++.++++++++++++||+.+|||....  ..+..++.+...+...  ..  +.+.++++|++|+|++++.++++ 
T Consensus       143 ~~e~~~~~~~~~~g~~~~~lrp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~  220 (312)
T 3ko8_A          143 AGEVMCATYARLFGVRCLAVRYANVVGPRLRH--GVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKF  220 (312)
T ss_dssp             HHHHHHHHHHHHHCCEEEEEEECEEECTTCCS--SHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCEEEEeeccccCcCCCC--ChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhc
Confidence            99999999998889999999999999998654  3556667776666332  22  34789999999999999999987 


Q ss_pred             --CC-CCceEEec-CccccHHHHHHHHHHhCC
Q 023689          245 --PA-ASGRYLCT-NGIYQFGDFAERVSKLFP  272 (278)
Q Consensus       245 --~~-~~~~~~~~-~~~~s~~e~~~~i~~~~~  272 (278)
                        .. ..++|+++ ++.+++.|+++.+.+.++
T Consensus       221 ~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g  252 (312)
T 3ko8_A          221 EEMDAPFLALNVGNVDAVRVLDIAQIVAEVLG  252 (312)
T ss_dssp             HHSCCSEEEEEESCSSCEEHHHHHHHHHHHHT
T ss_pred             cccCCCCcEEEEcCCCceeHHHHHHHHHHHhC
Confidence              33 34467654 678999999999999874

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=100.00  E-value=5.1e-40  Score=278.72  Aligned_cols=249  Identities=19%  Similarity=0.194  Sum_probs=199.6

Q ss_pred             cccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCcc
Q 023689            3 SEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCK   82 (278)
Q Consensus         3 ~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d   82 (278)
                      .+++.++|+|||||||||||++|+++|+++|+ +|++++|+...            .+++++.+|++|.+++.++++++|
T Consensus        13 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~------------~~~~~~~~Dl~d~~~~~~~~~~~d   79 (347)
T 4id9_A           13 GLVPRGSHMILVTGSAGRVGRAVVAALRTQGR-TVRGFDLRPSG------------TGGEEVVGSLEDGQALSDAIMGVS   79 (347)
T ss_dssp             --------CEEEETTTSHHHHHHHHHHHHTTC-CEEEEESSCCS------------SCCSEEESCTTCHHHHHHHHTTCS
T ss_pred             cccccCCCEEEEECCCChHHHHHHHHHHhCCC-EEEEEeCCCCC------------CCccEEecCcCCHHHHHHHHhCCC
Confidence            44566789999999999999999999999999 89999987654            177899999999999999999999


Q ss_pred             EEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCc
Q 023689           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK  162 (278)
Q Consensus        83 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  162 (278)
                      +|||+|+.....  ...+...+++|+.++.+++++|++.++++||++||.+++ +.......+++|+++..+.      +
T Consensus        80 ~vih~A~~~~~~--~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vy-g~~~~~~~~~~E~~~~~~~------~  150 (347)
T 4id9_A           80 AVLHLGAFMSWA--PADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVY-PENRPEFLPVTEDHPLCPN------S  150 (347)
T ss_dssp             EEEECCCCCCSS--GGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGT-TTTSCSSSSBCTTSCCCCC------S
T ss_pred             EEEECCcccCcc--hhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHh-CCCCCCCCCcCCCCCCCCC------C
Confidence            999999875542  234588999999999999999999999999999986554 4321224678888865553      7


Q ss_pred             hhhhHHHHHHHHHHHHHHhcCCceEEEecceee-------------CCCCCCC----------CchhHHHHHHHhhCCCC
Q 023689          163 WYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCL-------------GPLMQPY----------LNASCAVLQQLLQGSKD  219 (278)
Q Consensus       163 ~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~-------------g~~~~~~----------~~~~~~~~~~~~~~~~~  219 (278)
                      .|+.+|.++|++++.++++++++++++||+.+|             |+.....          ...+..++.....+.+.
T Consensus       151 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (347)
T 4id9_A          151 PYGLTKLLGEELVRFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPS  230 (347)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCC
T ss_pred             hHHHHHHHHHHHHHHHHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCe
Confidence            899999999999999998999999999999999             7654321          24556677777777765


Q ss_pred             cc---cccccCc----ccHHHHHHHHHhhhcCCC-CCceEEe-cCccccHHHHHHHHHHhCCC
Q 023689          220 TQ---EYHWLGA----VPVKDVAKAQVLLFESPA-ASGRYLC-TNGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       220 ~~---~~~~~~~----i~~~D~a~~~~~~~~~~~-~~~~~~~-~~~~~s~~e~~~~i~~~~~~  273 (278)
                      ..   +.+.+++    +|++|+|++++.++.++. .+++|++ +++.+|+.|+++.+.+.++.
T Consensus       231 ~~~g~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~  293 (347)
T 4id9_A          231 HILARNENGRPFRMHITDTRDMVAGILLALDHPEAAGGTFNLGADEPADFAALLPKIAALTGL  293 (347)
T ss_dssp             EEEEECTTCCBCEECEEEHHHHHHHHHHHHHCGGGTTEEEEESCSSCEEHHHHHHHHHHHHCC
T ss_pred             EEeCCCCcccCCccCcEeHHHHHHHHHHHhcCcccCCCeEEECCCCcccHHHHHHHHHHHhCC
Confidence            44   3467888    999999999999999874 4457865 56789999999999998853

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=100.00  E-value=5.3e-40  Score=277.66  Aligned_cols=265  Identities=35%  Similarity=0.607  Sum_probs=191.1

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc---cCCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF---ALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~---~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      +|+|||||||||||++|+++|+++|+ +|++++|+.+......   .+. .. .+++++++|++|++++.++++++|+||
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~-~V~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~~Dl~d~~~~~~~~~~~D~Vi   85 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGY-AVNTTVRDPDNQKKVSHLLELQ-EL-GDLKIFRADLTDELSFEAPIAGCDFVF   85 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTC-EEEEEESCTTCTTTTHHHHHHG-GG-SCEEEEECCTTTSSSSHHHHTTCSEEE
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCC-EEEEEEcCcchhhhHHHHHhcC-CC-CcEEEEecCCCChHHHHHHHcCCCEEE
Confidence            58999999999999999999999999 8998888765322111   111 01 168899999999999999999999999


Q ss_pred             EecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcC-CCEEEEecceeeeecCCCC-CCccccCCCCCchhhh--hc-c
Q 023689           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRRVVVTSSISAIVPNPGW-KGKVFDETSWTDLEYC--KS-R  160 (278)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~v~~Ss~~~~~~~~~~-~~~~~~E~~~~~~~~~--~~-~  160 (278)
                      |+|+..... ..+.....+++|+.|+.+++++|++.+ +++||++||.+++++.+.. ...+++|+++....+.  .. .
T Consensus        86 h~A~~~~~~-~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  164 (338)
T 2rh8_A           86 HVATPVHFA-SEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPP  164 (338)
T ss_dssp             EESSCCCC----------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------CC
T ss_pred             EeCCccCCC-CCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCCc
Confidence            999865321 122234589999999999999999985 8999999998766543211 1136778775443221  11 1


Q ss_pred             CchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccc--------ccccCcccHH
Q 023689          161 KKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQE--------YHWLGAVPVK  232 (278)
Q Consensus       161 ~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~i~~~  232 (278)
                      ...|+.||.++|.+++.+++++|++++++||++||||............+.....+.+...+        ...++++|++
T Consensus       165 ~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~v~  244 (338)
T 2rh8_A          165 TWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSGSVSIAHVE  244 (338)
T ss_dssp             CCCCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHSSEEEEEHH
T ss_pred             cchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCccccccccccccccCcccEEEHH
Confidence            12699999999999999887789999999999999998654322211222222344332221        1234899999


Q ss_pred             HHHHHHHhhhcCCCCCceEEecCccccHHHHHHHHHHhCCCCCCC
Q 023689          233 DVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVH  277 (278)
Q Consensus       233 D~a~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~p  277 (278)
                      |+|++++.+++++...++|+++++.+|+.|+++.+.+.+|..++|
T Consensus       245 Dva~a~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~~~~~~~~~  289 (338)
T 2rh8_A          245 DVCRAHIFVAEKESASGRYICCAANTSVPELAKFLSKRYPQYKVP  289 (338)
T ss_dssp             HHHHHHHHHHHCTTCCEEEEECSEEECHHHHHHHHHHHCTTSCCC
T ss_pred             HHHHHHHHHHcCCCcCCcEEEecCCCCHHHHHHHHHHhCCCCCCC
Confidence            999999999987666678888888899999999999998755444

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=100.00  E-value=7.9e-40  Score=278.60  Aligned_cols=258  Identities=18%  Similarity=0.147  Sum_probs=202.3

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcC--ccE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG--CKG   83 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~--~d~   83 (278)
                      .+++|+|||||||||||++|+++|+++|+ +|++++|+......+....... .+++++.+|++|++++.+++++  +|+
T Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~~~~~d~   83 (357)
T 1rkx_A            6 FWQGKRVFVTGHTGFKGGWLSLWLQTMGA-TVKGYSLTAPTVPSLFETARVA-DGMQSEIGDIRDQNKLLESIREFQPEI   83 (357)
T ss_dssp             HHTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCSSSSCHHHHTTTT-TTSEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             hhCCCEEEEECCCchHHHHHHHHHHhCCC-eEEEEeCCCcccchhhHhhccC-CceEEEEccccCHHHHHHHHHhcCCCE
Confidence            34578999999999999999999999999 9999999776543332111111 2789999999999999999986  899


Q ss_pred             EEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcC-CCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCc
Q 023689           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK  162 (278)
Q Consensus        84 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  162 (278)
                      |||+|+.........++...+++|+.++.+++++|++.+ +++||++||.+++.....  ..+++|+++..+      .+
T Consensus        84 vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~--~~~~~E~~~~~~------~~  155 (357)
T 1rkx_A           84 VFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEW--IWGYRENEAMGG------YD  155 (357)
T ss_dssp             EEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCS--SSCBCTTSCBCC------SS
T ss_pred             EEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCc--CCCCCCCCCCCC------CC
Confidence            999998643222234567889999999999999998876 889999999766543221  245777765444      36


Q ss_pred             hhhhHHHHHHHHHHHHHHhc---------CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcc--cccccCcccH
Q 023689          163 WYPVSKTLAEKAAWEFAEKH---------GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ--EYHWLGAVPV  231 (278)
Q Consensus       163 ~y~~sK~~~e~~~~~~~~~~---------~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~  231 (278)
                      .|+.+|.++|.+++.++.++         |++++++||+.+||+........+..++.....+.++.+  +++.++++|+
T Consensus       156 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~v  235 (357)
T 1rkx_A          156 PYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHV  235 (357)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEET
T ss_pred             ccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEECCCCCeeccEeH
Confidence            89999999999999988754         999999999999999864433466777788777877655  3478899999


Q ss_pred             HHHHHHHHhhhcC----C-CCCceEEecC---ccccHHHHHHHHHHhCCC
Q 023689          232 KDVAKAQVLLFES----P-AASGRYLCTN---GIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       232 ~D~a~~~~~~~~~----~-~~~~~~~~~~---~~~s~~e~~~~i~~~~~~  273 (278)
                      +|+|++++.++++    + ...++|++++   +.+|+.|+++.+.+.++.
T Consensus       236 ~Dva~a~~~~~~~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~  285 (357)
T 1rkx_A          236 LEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGE  285 (357)
T ss_dssp             HHHHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCT
T ss_pred             HHHHHHHHHHHHhhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhCC
Confidence            9999999998874    1 3345787763   579999999999998853

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=100.00  E-value=1.5e-39  Score=276.32  Aligned_cols=256  Identities=18%  Similarity=0.167  Sum_probs=201.9

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCC-ccccc----CCCCCCCceEEEEccCCChhhHHHHhcC
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-SHLFA----LPGAGDANLRVFEADVLDSGAVSRAVEG   80 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~-~~~~~----~~~~~~~~v~~~~~Dl~d~~~~~~~~~~   80 (278)
                      .++||+|||||||||||++|+++|++.|+ +|++++|+.... +.+..    +......+++++.+|++|++++.+++++
T Consensus        24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~  102 (352)
T 1sb8_A           24 PAQPKVWLITGVAGFIGSNLLETLLKLDQ-KVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAG  102 (352)
T ss_dssp             HHSCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTT
T ss_pred             CccCCeEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcC
Confidence            34678999999999999999999999999 899999865421 11111    0000001789999999999999999999


Q ss_pred             ccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhcc
Q 023689           81 CKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSR  160 (278)
Q Consensus        81 ~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  160 (278)
                      +|+|||+|+.........++...+++|+.++.+++++|++.++++||++||.+++....   ..+++|+++..+      
T Consensus       103 ~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~---~~~~~E~~~~~~------  173 (352)
T 1sb8_A          103 VDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHP---GLPKVEDTIGKP------  173 (352)
T ss_dssp             CSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCC---CSSBCTTCCCCC------
T ss_pred             CCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCC---CCCCCCCCCCCC------
Confidence            99999999875422122456788999999999999999999999999999977654332   256788887544      


Q ss_pred             CchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCC---CchhHHHHHHHhhCCCCcc---cccccCcccHHHH
Q 023689          161 KKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY---LNASCAVLQQLLQGSKDTQ---EYHWLGAVPVKDV  234 (278)
Q Consensus       161 ~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~---~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~D~  234 (278)
                      .+.|+.+|.++|.+++.++++++++++++||+.+||+.....   ...+..++.....+.+...   +++.++++|++|+
T Consensus       174 ~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dv  253 (352)
T 1sb8_A          174 LSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENT  253 (352)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHH
T ss_pred             CChhHHHHHHHHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHH
Confidence            368999999999999999888899999999999999986543   1345566777777777543   3478899999999


Q ss_pred             HHHHHhhhcCC-C-CCceEEe-cCccccHHHHHHHHHHhC
Q 023689          235 AKAQVLLFESP-A-ASGRYLC-TNGIYQFGDFAERVSKLF  271 (278)
Q Consensus       235 a~~~~~~~~~~-~-~~~~~~~-~~~~~s~~e~~~~i~~~~  271 (278)
                      |++++.++.+. . .+++|++ +++.+|+.|+++.+.+.+
T Consensus       254 a~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~  293 (352)
T 1sb8_A          254 VQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGL  293 (352)
T ss_dssp             HHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHhccccCCCceEEeCCCCCccHHHHHHHHHHHH
Confidence            99999988763 2 3457765 567899999999999988

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=100.00  E-value=4.7e-39  Score=269.95  Aligned_cols=249  Identities=18%  Similarity=0.178  Sum_probs=197.4

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcC--ccE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG--CKG   83 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~--~d~   83 (278)
                      ..++|+|||||||||||++|+++|+++|+ +|++++|+... ..   +      +++++.+|++|++++.+++++  +|+
T Consensus         9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~-~~---l------~~~~~~~Dl~d~~~~~~~~~~~~~d~   77 (321)
T 2pk3_A            9 HHGSMRALITGVAGFVGKYLANHLTEQNV-EVFGTSRNNEA-KL---P------NVEMISLDIMDSQRVKKVISDIKPDY   77 (321)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCTTC-CC---T------TEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             ccCcceEEEECCCChHHHHHHHHHHHCCC-EEEEEecCCcc-cc---c------eeeEEECCCCCHHHHHHHHHhcCCCE
Confidence            34578999999999999999999999999 99999987654 21   1      688999999999999999986  899


Q ss_pred             EEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhc-CCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCc
Q 023689           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK  162 (278)
Q Consensus        84 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  162 (278)
                      |||+|+........+++...+++|+.++.+++++|++. ++++||++||.+++.... ....+++|+++..+      .+
T Consensus        78 vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~-~~~~~~~E~~~~~~------~~  150 (321)
T 2pk3_A           78 IFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMIL-PEESPVSEENQLRP------MS  150 (321)
T ss_dssp             EEECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCC-GGGCSBCTTSCCBC------CS
T ss_pred             EEEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCC-CCCCCCCCCCCCCC------CC
Confidence            99999975543334567889999999999999999776 589999999976654321 01356888876544      36


Q ss_pred             hhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhh---C--CCCc-c--cccccCcccHHHH
Q 023689          163 WYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQ---G--SKDT-Q--EYHWLGAVPVKDV  234 (278)
Q Consensus       163 ~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~---~--~~~~-~--~~~~~~~i~~~D~  234 (278)
                      .|+.+|.++|.+++.+++++|++++++||+.+||+..... .....++.....   |  .+.. .  +.+.++++|++|+
T Consensus       151 ~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dv  229 (321)
T 2pk3_A          151 PYGVSKASVGMLARQYVKAYGMDIIHTRTFNHIGPGQSLG-FVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDI  229 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCTT-SHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHcCCCEEEEEeCcccCcCCCCC-chHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHH
Confidence            8999999999999999888899999999999999986543 234455555555   5  2322 2  3467899999999


Q ss_pred             HHHHHhhhcCCCCCceEEe-cCccccHHHHHHHHHHhCCC
Q 023689          235 AKAQVLLFESPAASGRYLC-TNGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       235 a~~~~~~~~~~~~~~~~~~-~~~~~s~~e~~~~i~~~~~~  273 (278)
                      |++++.++.++..+++|++ +++.++++|+++.+.+.++.
T Consensus       230 a~a~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~  269 (321)
T 2pk3_A          230 VQAYWLLSQYGKTGDVYNVCSGIGTRIQDVLDLLLAMANV  269 (321)
T ss_dssp             HHHHHHHHHHCCTTCEEEESCSCEEEHHHHHHHHHHHSSS
T ss_pred             HHHHHHHHhCCCCCCeEEeCCCCCeeHHHHHHHHHHHhCC
Confidence            9999999987654557865 46689999999999999864

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=100.00  E-value=4.8e-39  Score=275.67  Aligned_cols=257  Identities=19%  Similarity=0.199  Sum_probs=196.4

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCC-CCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNN-YTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g-~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~v   84 (278)
                      .++||+|||||||||||++|+++|+++| + +|++++|+......  .+..  ..+++++.+|++|++++.++++++|+|
T Consensus        29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~-~V~~~~r~~~~~~~--~l~~--~~~v~~~~~Dl~d~~~l~~~~~~~d~V  103 (377)
T 2q1s_A           29 KLANTNVMVVGGAGFVGSNLVKRLLELGVN-QVHVVDNLLSAEKI--NVPD--HPAVRFSETSITDDALLASLQDEYDYV  103 (377)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCS-EEEEECCCTTCCGG--GSCC--CTTEEEECSCTTCHHHHHHCCSCCSEE
T ss_pred             HhCCCEEEEECCccHHHHHHHHHHHHcCCc-eEEEEECCCCCchh--hccC--CCceEEEECCCCCHHHHHHHhhCCCEE
Confidence            4678999999999999999999999999 8 89999887654321  1111  127999999999999999999999999


Q ss_pred             EEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhc-CCCEEEEecceeeeecCCCCCCcccc--CCCCCchhhhhccC
Q 023689           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-GVRRVVVTSSISAIVPNPGWKGKVFD--ETSWTDLEYCKSRK  161 (278)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~v~~Ss~~~~~~~~~~~~~~~~--E~~~~~~~~~~~~~  161 (278)
                      ||+|+.........++...+++|+.++.+++++|++. ++++||++||.+++.. ..  ..+++  |+++..+.  ..+.
T Consensus       104 ih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~-~~--~~~~~~~E~~~~~~~--~~~~  178 (377)
T 2q1s_A          104 FHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAE-KT--FDDAKATEETDIVSL--HNND  178 (377)
T ss_dssp             EECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC-----------------CCCCCCCS--SCCC
T ss_pred             EECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCC-CC--CCCcCcccccccccc--cCCC
Confidence            9999875432122356789999999999999999998 8999999999665433 22  24566  77621000  0123


Q ss_pred             chhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCC---------CCC---CchhHHHHHHHhhCCCCcc---ccccc
Q 023689          162 KWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLM---------QPY---LNASCAVLQQLLQGSKDTQ---EYHWL  226 (278)
Q Consensus       162 ~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~---------~~~---~~~~~~~~~~~~~~~~~~~---~~~~~  226 (278)
                      +.|+.+|.++|.+++.++++++++++++||+.+||+..         ...   ......++.....+.+...   +++.+
T Consensus       179 ~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~  258 (377)
T 2q1s_A          179 SPYSMSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATR  258 (377)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCEE
T ss_pred             CchHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeEE
Confidence            68999999999999999888899999999999999976         221   2346667777777776543   34789


Q ss_pred             CcccHHHHHHH-HHhhhcCCCCCceEEec-CccccHHHHHHHHHHhCCC
Q 023689          227 GAVPVKDVAKA-QVLLFESPAASGRYLCT-NGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       227 ~~i~~~D~a~~-~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~i~~~~~~  273 (278)
                      +++|++|+|++ ++.+++++. .|+|+++ ++.+|++|+++.+.+.++.
T Consensus       259 ~~i~v~Dva~a~i~~~~~~~~-~g~~~i~~~~~~s~~e~~~~i~~~~g~  306 (377)
T 2q1s_A          259 DFIFVEDVANGLIACAADGTP-GGVYNIASGKETSIADLATKINEITGN  306 (377)
T ss_dssp             CCEEHHHHHHHHHHHHHHCCT-TEEEECCCCCCEEHHHHHHHHHHHHTC
T ss_pred             eeEEHHHHHHHHHHHHHhcCC-CCeEEecCCCceeHHHHHHHHHHHhCC
Confidence            99999999999 999998765 4588665 5789999999999998853

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=100.00  E-value=2.3e-38  Score=271.62  Aligned_cols=255  Identities=14%  Similarity=0.110  Sum_probs=200.6

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      .+||+|||||||||||++|+++|+++|+ +|++++|+.........      .+++++.+|++|++++.++++++|+|||
T Consensus        27 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~------~~v~~~~~Dl~d~~~~~~~~~~~d~Vih   99 (379)
T 2c5a_A           27 SENLKISITGAGGFIASHIARRLKHEGH-YVIASDWKKNEHMTEDM------FCDEFHLVDLRVMENCLKVTEGVDHVFN   99 (379)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCSSSCGGG------TCSEEEECCTTSHHHHHHHHTTCSEEEE
T ss_pred             ccCCeEEEECCccHHHHHHHHHHHHCCC-eEEEEECCCccchhhcc------CCceEEECCCCCHHHHHHHhCCCCEEEE
Confidence            3578999999999999999999999999 89999997655332211      1788999999999999999999999999


Q ss_pred             ecccCCCCCC-CCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCC--CCccccCCCCCchhhhhccCch
Q 023689           87 VASPCTLEDP-VDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGW--KGKVFDETSWTDLEYCKSRKKW  163 (278)
Q Consensus        87 ~a~~~~~~~~-~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~--~~~~~~E~~~~~~~~~~~~~~~  163 (278)
                      +|+....... ..++...+++|+.++.+++++|++.++++||++||.+++......  ...+++|+++.    ...+.+.
T Consensus       100 ~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~----~~~~~~~  175 (379)
T 2c5a_A          100 LAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAW----PAEPQDA  175 (379)
T ss_dssp             CCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGS----SBCCSSH
T ss_pred             CceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCcCcccCC----CCCCCCh
Confidence            9987543111 456788999999999999999999999999999996654432110  11346666521    1123468


Q ss_pred             hhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCC---CchhHHHHHHHhhCCC-Cc-c--cccccCcccHHHHHH
Q 023689          164 YPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY---LNASCAVLQQLLQGSK-DT-Q--EYHWLGAVPVKDVAK  236 (278)
Q Consensus       164 y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~---~~~~~~~~~~~~~~~~-~~-~--~~~~~~~i~~~D~a~  236 (278)
                      |+.+|.++|.+++.++++++++++++||+.+||+.....   ......++.....+.+ .. .  +.+.++++|++|+|+
T Consensus       176 Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~  255 (379)
T 2c5a_A          176 FGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVE  255 (379)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHH
Confidence            999999999999999888899999999999999976542   1245667777767765 32 2  346899999999999


Q ss_pred             HHHhhhcCCCCCceEE-ecCccccHHHHHHHHHHhCCC
Q 023689          237 AQVLLFESPAASGRYL-CTNGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       237 ~~~~~~~~~~~~~~~~-~~~~~~s~~e~~~~i~~~~~~  273 (278)
                      +++.+++++ ..+.|+ .+++.+|++|+++.+.+.++.
T Consensus       256 ai~~~l~~~-~~~~~ni~~~~~~s~~e~~~~i~~~~g~  292 (379)
T 2c5a_A          256 GVLRLTKSD-FREPVNIGSDEMVSMNEMAEMVLSFEEK  292 (379)
T ss_dssp             HHHHHHHSS-CCSCEEECCCCCEEHHHHHHHHHHTTTC
T ss_pred             HHHHHhhcc-CCCeEEeCCCCccCHHHHHHHHHHHhCC
Confidence            999999876 445675 456789999999999998853

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=9.4e-39  Score=270.28  Aligned_cols=256  Identities=19%  Similarity=0.183  Sum_probs=196.1

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc--CccEE
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGV   84 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~v   84 (278)
                      ++|+|||||||||||++++++|+++|+ +|++++|+........ .+......++.++.+|++|++++.++++  ++|+|
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v   82 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGY-DVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAA   82 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEE
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCC-cEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEE
Confidence            357999999999999999999999999 8999988765543221 1100001178899999999999999998  89999


Q ss_pred             EEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchh
Q 023689           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWY  164 (278)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y  164 (278)
                      ||+|+........+.+...+++|+.++.+++++|++.++++||++||.+++ +...  ..+++|+++..+      .+.|
T Consensus        83 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~-g~~~--~~~~~e~~~~~~------~~~Y  153 (341)
T 3enk_A           83 IHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVY-GVPE--RSPIDETFPLSA------TNPY  153 (341)
T ss_dssp             EECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGB-CSCS--SSSBCTTSCCBC------SSHH
T ss_pred             EECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEe-cCCC--CCCCCCCCCCCC------CChh
Confidence            999997554222344568899999999999999999999999999996654 4333  367888876554      3789


Q ss_pred             hhHHHHHHHHHHHHHHhcC-CceEEEecceeeCCCCCCC--------CchhHHHHHHHhhCC--CCc---------cccc
Q 023689          165 PVSKTLAEKAAWEFAEKHG-VDVVAIHPATCLGPLMQPY--------LNASCAVLQQLLQGS--KDT---------QEYH  224 (278)
Q Consensus       165 ~~sK~~~e~~~~~~~~~~~-~~~~~lrp~~i~g~~~~~~--------~~~~~~~~~~~~~~~--~~~---------~~~~  224 (278)
                      +.+|.++|.+++.++.+.+ ++++++||+++||+.....        .......+.+...+.  ++.         .+++
T Consensus       154 ~~sK~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~  233 (341)
T 3enk_A          154 GQTKLMAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTG  233 (341)
T ss_dssp             HHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSC
T ss_pred             HHHHHHHHHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCe
Confidence            9999999999999988875 9999999999999964211        122233344434432  221         2357


Q ss_pred             ccCcccHHHHHHHHHhhhcCC---CCCceEEe-cCccccHHHHHHHHHHhCCC
Q 023689          225 WLGAVPVKDVAKAQVLLFESP---AASGRYLC-TNGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       225 ~~~~i~~~D~a~~~~~~~~~~---~~~~~~~~-~~~~~s~~e~~~~i~~~~~~  273 (278)
                      .++++|++|+|++++.++++.   ..+++|++ +++.+|+.|+++.+.+.++.
T Consensus       234 ~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~  286 (341)
T 3enk_A          234 VRDYIHVVDLARGHIAALDALERRDASLTVNLGTGRGYSVLEVVRAFEKASGR  286 (341)
T ss_dssp             EECEEEHHHHHHHHHHHHHHHHHHTSCEEEEESCSCCEEHHHHHHHHHHHHCS
T ss_pred             eEeeEEHHHHHHHHHHHHHhhhcCCcceEEEeCCCCceeHHHHHHHHHHHhCC
Confidence            899999999999999999862   34457865 57789999999999998853

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=100.00  E-value=1.2e-38  Score=268.38  Aligned_cols=249  Identities=17%  Similarity=0.198  Sum_probs=193.2

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc--CccEEEE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFH   86 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vi~   86 (278)
                      ||+|||||||||||++|+++|+++|+ +|++++|+.....  ..+.   . +++++.+|++|++++.++++  ++|+|||
T Consensus         1 M~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~--~~~~---~-~~~~~~~D~~~~~~~~~~~~~~~~d~vih   73 (330)
T 2c20_A            1 MNSILICGGAGYIGSHAVKKLVDEGL-SVVVVDNLQTGHE--DAIT---E-GAKFYNGDLRDKAFLRDVFTQENIEAVMH   73 (330)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCG--GGSC---T-TSEEEECCTTCHHHHHHHHHHSCEEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCCCcCch--hhcC---C-CcEEEECCCCCHHHHHHHHhhcCCCEEEE
Confidence            57999999999999999999999999 8999988654322  1221   1 78899999999999999998  8999999


Q ss_pred             ecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhh
Q 023689           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPV  166 (278)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~  166 (278)
                      +|+........+++...+++|+.++.+++++|++.++++||++||.+++ +...  ..+++|+++..+      .+.|+.
T Consensus        74 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~-~~~~--~~~~~E~~~~~~------~~~Y~~  144 (330)
T 2c20_A           74 FAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATY-GEVD--VDLITEETMTNP------TNTYGE  144 (330)
T ss_dssp             CCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGG-CSCS--SSSBCTTSCCCC------SSHHHH
T ss_pred             CCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceee-CCCC--CCCCCcCCCCCC------CChHHH
Confidence            9987543212245678899999999999999999999999999996654 3332  367888887544      368999


Q ss_pred             HHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCC--------CCchhHHHHHHHhhCC-CCc---------ccccccCc
Q 023689          167 SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQP--------YLNASCAVLQQLLQGS-KDT---------QEYHWLGA  228 (278)
Q Consensus       167 sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~--------~~~~~~~~~~~~~~~~-~~~---------~~~~~~~~  228 (278)
                      +|.++|.+++.++++++++++++||+.+||+....        .......++.....+. +..         .+++.+++
T Consensus       145 sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~  224 (330)
T 2c20_A          145 TKLAIEKMLHWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDY  224 (330)
T ss_dssp             HHHHHHHHHHHHHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECE
T ss_pred             HHHHHHHHHHHHHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEee
Confidence            99999999999998889999999999999996321        1123334444333222 221         23467899


Q ss_pred             ccHHHHHHHHHhhhcCCCC---CceEEec-CccccHHHHHHHHHHhCCC
Q 023689          229 VPVKDVAKAQVLLFESPAA---SGRYLCT-NGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       229 i~~~D~a~~~~~~~~~~~~---~~~~~~~-~~~~s~~e~~~~i~~~~~~  273 (278)
                      +|++|+|++++.+++++..   .++|+++ ++.+|+.|+++.+.+.++.
T Consensus       225 v~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~  273 (330)
T 2c20_A          225 IHVEDLVAAHFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNH  273 (330)
T ss_dssp             EEHHHHHHHHHHHHHHHHTTCCCEEEECCCTTCBCHHHHHHHHHHHTTS
T ss_pred             EeHHHHHHHHHHHHhccccCCCCCeEEeCCCCCccHHHHHHHHHHHhCC
Confidence            9999999999999876432   3578765 6789999999999999853

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=100.00  E-value=1.3e-38  Score=269.02  Aligned_cols=251  Identities=21%  Similarity=0.255  Sum_probs=198.6

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHC---C---CCeEEEEecCCC--CCcccccCCCCCCCceEEEEccCCChhhHHHHhcCc
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDN---N---YTSINATVFPGS--DSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGC   81 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~---g---~~~v~~~~r~~~--~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~   81 (278)
                      |+|||||||||||++|+++|+++   |   + +|++++|+..  ....+..+..  ..+++++.+|++|++++.+++.++
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~-~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~   77 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPAD-EVIVLDSLTYAGNRANLAPVDA--DPRLRFVHGDIRDAGLLARELRGV   77 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCS-EEEEEECCCTTCCGGGGGGGTT--CTTEEEEECCTTCHHHHHHHTTTC
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCce-EEEEEECCCccCchhhhhhccc--CCCeEEEEcCCCCHHHHHHHhcCC
Confidence            47999999999999999999997   7   7 8999988653  2222222211  127899999999999999999999


Q ss_pred             cEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccC
Q 023689           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRK  161 (278)
Q Consensus        82 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  161 (278)
                      |+|||+|+.........++...+++|+.++.+++++|++.++++||++||.+++.. ..  ..+++|+++..+      .
T Consensus        78 d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~-~~--~~~~~E~~~~~~------~  148 (337)
T 1r6d_A           78 DAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGS-ID--SGSWTESSPLEP------N  148 (337)
T ss_dssp             CEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCC-CS--SSCBCTTSCCCC------C
T ss_pred             CEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCC-CC--CCCCCCCCCCCC------C
Confidence            99999998754321223567889999999999999999999999999999665433 22  256788776544      3


Q ss_pred             chhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcc---cccccCcccHHHHHHHH
Q 023689          162 KWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ---EYHWLGAVPVKDVAKAQ  238 (278)
Q Consensus       162 ~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~D~a~~~  238 (278)
                      +.|+.+|.++|.+++.++++++++++++||+.+||+..... ..+..++.....+.+...   +++.++++|++|+|+++
T Consensus       149 ~~Y~~sK~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~  227 (337)
T 1r6d_A          149 SPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPE-KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGI  227 (337)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTT-SHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHCCCEEEEEeeeeECCCCCCC-ChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHH
Confidence            68999999999999999888899999999999999986432 345566677777766543   34678999999999999


Q ss_pred             HhhhcCCCCCceEEec-CccccHHHHHHHHHHhCCC
Q 023689          239 VLLFESPAASGRYLCT-NGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       239 ~~~~~~~~~~~~~~~~-~~~~s~~e~~~~i~~~~~~  273 (278)
                      +.+++++..+++|+++ ++.+|+.|+++.+.+.++.
T Consensus       228 ~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~  263 (337)
T 1r6d_A          228 ALVLAGGRAGEIYHIGGGLELTNRELTGILLDSLGA  263 (337)
T ss_dssp             HHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHTC
T ss_pred             HHHHhCCCCCCEEEeCCCCCccHHHHHHHHHHHhCC
Confidence            9999876554578655 5689999999999998754

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=100.00  E-value=1.7e-38  Score=269.48  Aligned_cols=253  Identities=17%  Similarity=0.209  Sum_probs=199.2

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHC--CCCeEEEEecCCCC--CcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDN--NYTSINATVFPGSD--SSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~--g~~~v~~~~r~~~~--~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~v   84 (278)
                      ||+|||||||||||++|+++|+++  |+ +|++++|+...  ...+..+.   ..+++++.+|++|++++.++++++|+|
T Consensus         4 m~~vlVTGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~d~v   79 (348)
T 1oc2_A            4 FKNIIVTGGAGFIGSNFVHYVYNNHPDV-HVTVLDKLTYAGNKANLEAIL---GDRVELVVGDIADAELVDKLAAKADAI   79 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTC-EEEEEECCCTTCCGGGTGGGC---SSSEEEEECCTTCHHHHHHHHTTCSEE
T ss_pred             CcEEEEeCCccHHHHHHHHHHHHhCCCC-EEEEEeCCCCCCChhHHhhhc---cCCeEEEECCCCCHHHHHHHhhcCCEE
Confidence            689999999999999999999998  78 89999886532  22222221   127899999999999999999999999


Q ss_pred             EEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCC---------CCCccccCCCCCchh
Q 023689           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPG---------WKGKVFDETSWTDLE  155 (278)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~---------~~~~~~~E~~~~~~~  155 (278)
                      ||+|+.........++...+++|+.++.+++++|++.++ +||++||.+++.....         ....+++|+++..+ 
T Consensus        80 ih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~~~-  157 (348)
T 1oc2_A           80 VHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNP-  157 (348)
T ss_dssp             EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCC-
T ss_pred             EECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCC-eEEEecccceeCCCcccccccccccccCCCcCCCCCCCC-
Confidence            999987543212235678899999999999999999887 9999999665432211         01146777765444 


Q ss_pred             hhhccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcc---cccccCcccHH
Q 023689          156 YCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ---EYHWLGAVPVK  232 (278)
Q Consensus       156 ~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~  232 (278)
                           .+.|+.+|..+|.+++.++++++++++++||+.+||+..... ..+..++.....+.+...   +.+.++++|++
T Consensus       158 -----~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  231 (348)
T 1oc2_A          158 -----SSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIE-KFIPRQITNILAGIKPKLYGEGKNVRDWIHTN  231 (348)
T ss_dssp             -----CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTT-SHHHHHHHHHHHTCCCEEETTSCCEEECEEHH
T ss_pred             -----CCccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCcc-chHHHHHHHHHcCCCceEecCCCceEeeEEHH
Confidence                 368999999999999999888899999999999999986432 345566777777776543   34678999999


Q ss_pred             HHHHHHHhhhcCCCCCceEEec-CccccHHHHHHHHHHhCCC
Q 023689          233 DVAKAQVLLFESPAASGRYLCT-NGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       233 D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~i~~~~~~  273 (278)
                      |+|++++.+++++..+++|+++ ++.+++.|+++.+.+.++.
T Consensus       232 Dva~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~  273 (348)
T 1oc2_A          232 DHSTGVWAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQ  273 (348)
T ss_dssp             HHHHHHHHHHHHCCTTCEEEECCSCEEEHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHhhCCCCCCeEEeCCCCCCCHHHHHHHHHHHhCC
Confidence            9999999999866544577655 5689999999999999864

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=100.00  E-value=1.7e-38  Score=268.20  Aligned_cols=252  Identities=18%  Similarity=0.197  Sum_probs=197.0

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCC--CCeEEEEecCCC--CCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNN--YTSINATVFPGS--DSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g--~~~v~~~~r~~~--~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~v   84 (278)
                      +|+|||||||||||++|+++|+++|  + +|++++|...  ..+.+..+..  ..+++++.+|++|++++.+++.++|+|
T Consensus         3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~-~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~d~v   79 (336)
T 2hun_A            3 SMKLLVTGGMGFIGSNFIRYILEKHPDW-EVINIDKLGYGSNPANLKDLED--DPRYTFVKGDVADYELVKELVRKVDGV   79 (336)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCTTC-EEEEEECCCTTCCGGGGTTTTT--CTTEEEEECCTTCHHHHHHHHHTCSEE
T ss_pred             CCeEEEECCCchHHHHHHHHHHHhCCCC-EEEEEecCcccCchhHHhhhcc--CCceEEEEcCCCCHHHHHHHhhCCCEE
Confidence            3689999999999999999999997  6 8999988642  2222322221  127999999999999999999999999


Q ss_pred             EEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCC-CEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCch
Q 023689           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV-RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW  163 (278)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  163 (278)
                      ||+|+.........++...+++|+.++.+++++|++.+. ++||++||.+++. ...  ..+++|+++..+      .+.
T Consensus        80 ih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg-~~~--~~~~~E~~~~~~------~~~  150 (336)
T 2hun_A           80 VHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYG-DIL--KGSFTENDRLMP------SSP  150 (336)
T ss_dssp             EECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGC-CCS--SSCBCTTBCCCC------CSH
T ss_pred             EECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHC-CCC--CCCcCCCCCCCC------CCc
Confidence            999997543222235678899999999999999998864 7999999966543 322  256788776544      368


Q ss_pred             hhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcc---cccccCcccHHHHHHHHHh
Q 023689          164 YPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ---EYHWLGAVPVKDVAKAQVL  240 (278)
Q Consensus       164 y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~D~a~~~~~  240 (278)
                      |+.+|.++|.+++.++.+++++++++||+.+||+..... .....++.....+.+...   +.+.++++|++|+|++++.
T Consensus       151 Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  229 (336)
T 2hun_A          151 YSATKAASDMLVLGWTRTYNLNASITRCTNNYGPYQFPE-KLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIEL  229 (336)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCEEEEEEECEEESTTCCTT-SHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHhCCCEEEEeeeeeeCcCCCcC-chHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHH
Confidence            999999999999999988899999999999999986432 345566677777765443   3467899999999999999


Q ss_pred             hhcCCCCCceEEec-CccccHHHHHHHHHHhCCC
Q 023689          241 LFESPAASGRYLCT-NGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       241 ~~~~~~~~~~~~~~-~~~~s~~e~~~~i~~~~~~  273 (278)
                      ++++...+++|+++ ++.+|+.|+++.+.+.++.
T Consensus       230 ~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~  263 (336)
T 2hun_A          230 VLLKGESREIYNISAGEEKTNLEVVKIILRLMGK  263 (336)
T ss_dssp             HHHHCCTTCEEEECCSCEECHHHHHHHHHHHTTC
T ss_pred             HHhCCCCCCEEEeCCCCcccHHHHHHHHHHHhCC
Confidence            99865544577665 5679999999999999864

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=100.00  E-value=7.8e-39  Score=267.51  Aligned_cols=246  Identities=26%  Similarity=0.282  Sum_probs=194.9

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc--CccEEEEe
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFHV   87 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vi~~   87 (278)
                      |+|||||||||||++++++|+++|+ +|++++|......  ..+.    .+++++.+|++|++++.++++  ++|+|||+
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~--~~~~----~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~   73 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLARGL-EVAVLDNLATGKR--ENVP----KGVPFFRVDLRDKEGVERAFREFRPTHVSHQ   73 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTC-EEEEECCCSSCCG--GGSC----TTCCEECCCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCC-EEEEEECCCcCch--hhcc----cCeEEEECCCCCHHHHHHHHHhcCCCEEEEC
Confidence            4799999999999999999999999 8988887433211  1111    167789999999999999998  89999999


Q ss_pred             cccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecC-CCCCCccccCCCCCchhhhhccCchhhh
Q 023689           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPN-PGWKGKVFDETSWTDLEYCKSRKKWYPV  166 (278)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~-~~~~~~~~~E~~~~~~~~~~~~~~~y~~  166 (278)
                      |+.........++...+++|+.++.+++++|++.++++||++||.+++|+. ..  ..+++|+++..+      .+.|+.
T Consensus        74 a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~--~~~~~E~~~~~~------~~~Y~~  145 (311)
T 2p5y_A           74 AAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPE--GERAEETWPPRP------KSPYAA  145 (311)
T ss_dssp             CSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCT--TCCBCTTSCCCC------CSHHHH
T ss_pred             ccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCC--CCCcCCCCCCCC------CChHHH
Confidence            987543222245678899999999999999999999999999997455543 22  256778776444      268999


Q ss_pred             HHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCC--CchhHHHHHHHhhCCCCcc--------cccccCcccHHHHHH
Q 023689          167 SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY--LNASCAVLQQLLQGSKDTQ--------EYHWLGAVPVKDVAK  236 (278)
Q Consensus       167 sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~--~~~~~~~~~~~~~~~~~~~--------~~~~~~~i~~~D~a~  236 (278)
                      +|.++|.+++.++++++++++++||+.+|||.....  ...+..++.....+.+...        +.+.++++|++|+|+
T Consensus       146 sK~~~e~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~  225 (311)
T 2p5y_A          146 SKAAFEHYLSVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAE  225 (311)
T ss_dssp             HHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHH
Confidence            999999999999888899999999999999976543  2345566666667765432        236789999999999


Q ss_pred             HHHhhhcCCCCCceEEe-cCccccHHHHHHHHHHhCC
Q 023689          237 AQVLLFESPAASGRYLC-TNGIYQFGDFAERVSKLFP  272 (278)
Q Consensus       237 ~~~~~~~~~~~~~~~~~-~~~~~s~~e~~~~i~~~~~  272 (278)
                      +++.+++++  +++|++ +++.+|++|+++.+.+.++
T Consensus       226 a~~~~~~~~--~~~~~i~~~~~~s~~e~~~~i~~~~g  260 (311)
T 2p5y_A          226 AHALALFSL--EGIYNVGTGEGHTTREVLMAVAEAAG  260 (311)
T ss_dssp             HHHHHHHHC--CEEEEESCSCCEEHHHHHHHHHHHHT
T ss_pred             HHHHHHhCC--CCEEEeCCCCCccHHHHHHHHHHHhC
Confidence            999998764  557765 5678999999999999875

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=100.00  E-value=2.7e-38  Score=266.87  Aligned_cols=253  Identities=18%  Similarity=0.152  Sum_probs=199.3

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCc--ccccCCCCCCCceEEEEccCCChhhHHHHhcC--ccE
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS--HLFALPGAGDANLRVFEADVLDSGAVSRAVEG--CKG   83 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~--~d~   83 (278)
                      .+|+|||||||||||++|+++|+++|+ +|++++|+.....  .+..+..  ..+++++.+|++|++++.+++++  +|+
T Consensus        13 ~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   89 (335)
T 1rpn_A           13 MTRSALVTGITGQDGAYLAKLLLEKGY-RVHGLVARRSSDTRWRLRELGI--EGDIQYEDGDMADACSVQRAVIKAQPQE   89 (335)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSSCCCHHHHHTTC--GGGEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             cCCeEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCCccccccchhhccc--cCceEEEECCCCCHHHHHHHHHHcCCCE
Confidence            468999999999999999999999999 9999999765421  1111111  11789999999999999999985  699


Q ss_pred             EEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCC-CEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCc
Q 023689           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV-RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK  162 (278)
Q Consensus        84 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  162 (278)
                      |||+|+.........++...+++|+.++.+++++|++.++ ++||++||.+++....   ..+++|+++..+.      +
T Consensus        90 Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~---~~~~~E~~~~~p~------~  160 (335)
T 1rpn_A           90 VYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQ---AERQDENTPFYPR------S  160 (335)
T ss_dssp             EEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCS---SSSBCTTSCCCCC------S
T ss_pred             EEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCC---CCCCCcccCCCCC------C
Confidence            9999997553222456788999999999999999999886 8999999966544322   2578888766553      6


Q ss_pred             hhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCC--chhHHHHHHHhhCCCCc--c--cccccCcccHHHHHH
Q 023689          163 WYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL--NASCAVLQQLLQGSKDT--Q--EYHWLGAVPVKDVAK  236 (278)
Q Consensus       163 ~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~--~--~~~~~~~i~~~D~a~  236 (278)
                      .|+.+|.++|.+++.++++++++++++||+++|||......  ..+..++.....+.+..  .  +++.++++|++|+|+
T Consensus       161 ~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~  240 (335)
T 1rpn_A          161 PYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVE  240 (335)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHH
Confidence            89999999999999999888999999999999999765432  22445566666676432  2  357899999999999


Q ss_pred             HHHhhhcCCCCCceEEe-cCccccHHHHHHHHHHhCCC
Q 023689          237 AQVLLFESPAASGRYLC-TNGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       237 ~~~~~~~~~~~~~~~~~-~~~~~s~~e~~~~i~~~~~~  273 (278)
                      +++.+++++. .++|++ +++.+|+.|+++.+.+.++.
T Consensus       241 a~~~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~  277 (335)
T 1rpn_A          241 AMWLMLQQDK-ADDYVVATGVTTTVRDMCQIAFEHVGL  277 (335)
T ss_dssp             HHHHHHHSSS-CCCEEECCSCEEEHHHHHHHHHHTTTC
T ss_pred             HHHHHHhcCC-CCEEEEeCCCCccHHHHHHHHHHHhCC
Confidence            9999998765 367755 56789999999999999864

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=100.00  E-value=2.3e-39  Score=270.72  Aligned_cols=247  Identities=16%  Similarity=0.158  Sum_probs=194.3

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHC--CCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc--CccEE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDN--NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGV   84 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~--g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~v   84 (278)
                      +|+|||||||||||++|+++|+++  |+ +|++++|+..... +..       +++++.+|++|++++.++++  ++|+|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~-~~~-------~~~~~~~D~~d~~~~~~~~~~~~~d~v   72 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTE-NVIASDIRKLNTD-VVN-------SGPFEVVNALDFNQIEHLVEVHKITDI   72 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGG-GEEEEESCCCSCH-HHH-------SSCEEECCTTCHHHHHHHHHHTTCCEE
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCC-EEEEEcCCCcccc-ccC-------CCceEEecCCCHHHHHHHHhhcCCCEE
Confidence            378999999999999999999998  88 8999988765432 111       57789999999999999998  89999


Q ss_pred             EEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchh
Q 023689           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWY  164 (278)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y  164 (278)
                      ||+|+..... ...++...+++|+.++.+++++|++.++++||++||.+++.....  ..+.+|+++..+      .+.|
T Consensus        73 ih~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~--~~~~~e~~~~~~------~~~Y  143 (312)
T 2yy7_A           73 YLMAALLSAT-AEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTP--KENTPQYTIMEP------STVY  143 (312)
T ss_dssp             EECCCCCHHH-HHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSC--SSSBCSSCBCCC------CSHH
T ss_pred             EECCccCCCc-hhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCC--CCCccccCcCCC------Cchh
Confidence            9999864421 124567889999999999999999999999999999766544322  246777765444      3689


Q ss_pred             hhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCC---chh-HHHHHHHhhCCCCcc--cccccCcccHHHHHHHH
Q 023689          165 PVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL---NAS-CAVLQQLLQGSKDTQ--EYHWLGAVPVKDVAKAQ  238 (278)
Q Consensus       165 ~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~---~~~-~~~~~~~~~~~~~~~--~~~~~~~i~~~D~a~~~  238 (278)
                      +.+|.++|.+++.++++++++++++||+.+||+...+..   ... ..+......+.....  +++.++++|++|+|+++
T Consensus       144 ~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~  223 (312)
T 2yy7_A          144 GISKQAGERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDAT  223 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHHHHH
Confidence            999999999999998888999999999999997643321   222 333333334433222  45789999999999999


Q ss_pred             HhhhcCCCC----CceEEecCccccHHHHHHHHHHhCCC
Q 023689          239 VLLFESPAA----SGRYLCTNGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       239 ~~~~~~~~~----~~~~~~~~~~~s~~e~~~~i~~~~~~  273 (278)
                      +.+++++..    +++|+++++.+|++|+++.+.+.++.
T Consensus       224 ~~~~~~~~~~~~~~~~~ni~~~~~s~~e~~~~i~~~~~~  262 (312)
T 2yy7_A          224 INIMKAPVEKIKIHSSYNLAAMSFTPTEIANEIKKHIPE  262 (312)
T ss_dssp             HHHHHSCGGGCCCSSCEECCSEEECHHHHHHHHHTTCTT
T ss_pred             HHHHhCcccccccCceEEeCCCccCHHHHHHHHHHHCCC
Confidence            999987653    25788777899999999999999874

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=100.00  E-value=1.6e-38  Score=266.48  Aligned_cols=241  Identities=18%  Similarity=0.123  Sum_probs=188.8

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCC----CCcccccCCCCCCCceEEEEccCCChhhHHHHhcCc
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS----DSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGC   81 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~----~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~   81 (278)
                      +++||+|||||||||||++|+++|+++|+ +|++++|+..    ....+..+..  ..+++++.+|++          ++
T Consensus         4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~----------~~   70 (321)
T 3vps_A            4 NTLKHRILITGGAGFIGGHLARALVASGE-EVTVLDDLRVPPMIPPEGTGKFLE--KPVLELEERDLS----------DV   70 (321)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTC-CEEEECCCSSCCSSCCTTSSEEEC--SCGGGCCHHHHT----------TE
T ss_pred             ccCCCeEEEECCCChHHHHHHHHHHHCCC-EEEEEecCCcccccchhhhhhhcc--CCCeeEEeCccc----------cC
Confidence            45678999999999999999999999999 8999998765    2222211110  114555666665          89


Q ss_pred             cEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccC
Q 023689           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRK  161 (278)
Q Consensus        82 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  161 (278)
                      |+|||+|+..........+...++ |+.++.+++++|++.++++|||+||.+++... .  ..+++|+++..+.      
T Consensus        71 d~vi~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~-~--~~~~~E~~~~~p~------  140 (321)
T 3vps_A           71 RLVYHLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSVGVPKVVVGSTCEVYGQA-D--TLPTPEDSPLSPR------  140 (321)
T ss_dssp             EEEEECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSC-S--SSSBCTTSCCCCC------
T ss_pred             CEEEECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHcCCCeEEEecCHHHhCCC-C--CCCCCCCCCCCCC------
Confidence            999999997654333345566777 99999999999999999999999996654433 2  3678888876553      


Q ss_pred             chhhhHHHHHHHHHHHHHHhcCC-ceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcc---cccccCcccHHHHHHH
Q 023689          162 KWYPVSKTLAEKAAWEFAEKHGV-DVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ---EYHWLGAVPVKDVAKA  237 (278)
Q Consensus       162 ~~y~~sK~~~e~~~~~~~~~~~~-~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~D~a~~  237 (278)
                      +.|+.+|..+|.+++.+++++++ +++++||+.+||+..... .....++.....+.+...   +++.++++|++|+|++
T Consensus       141 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~  219 (321)
T 3vps_A          141 SPYAASKVGLEMVAGAHQRASVAPEVGIVRFFNVYGPGERPD-ALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDK  219 (321)
T ss_dssp             SHHHHHHHHHHHHHHHHHHSSSSCEEEEEEECEEECTTCCTT-SHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHcCCCceEEEEeccccCcCCCCC-ChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHH
Confidence            78999999999999999988899 999999999999986653 456677777777766544   3478999999999999


Q ss_pred             HHhhhcCCCCCceEEec-CccccHHHHHHHHHHhCC
Q 023689          238 QVLLFESPAASGRYLCT-NGIYQFGDFAERVSKLFP  272 (278)
Q Consensus       238 ~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~i~~~~~  272 (278)
                      ++.++.++..+ +|+++ ++.+|+.|+++.+. .++
T Consensus       220 ~~~~~~~~~~g-~~~i~~~~~~s~~e~~~~i~-~~g  253 (321)
T 3vps_A          220 LVALANRPLPS-VVNFGSGQSLSVNDVIRILQ-ATS  253 (321)
T ss_dssp             HHHGGGSCCCS-EEEESCSCCEEHHHHHHHHH-TTC
T ss_pred             HHHHHhcCCCC-eEEecCCCcccHHHHHHHHH-HhC
Confidence            99999987764 88655 67899999999999 775

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=100.00  E-value=2.1e-37  Score=261.96  Aligned_cols=264  Identities=28%  Similarity=0.399  Sum_probs=202.8

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCC-CCCCCceEEE-EccCCChhhHHHHhcCccEE
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP-GAGDANLRVF-EADVLDSGAVSRAVEGCKGV   84 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~-~~~~~~v~~~-~~Dl~d~~~~~~~~~~~d~v   84 (278)
                      .++|+|||||||||||++|+++|+++|+ +|++++|+......+.... .....+++++ .+|++|++++.++++++|+|
T Consensus         9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   87 (342)
T 1y1p_A            9 PEGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGV   87 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEE
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEE
Confidence            4578999999999999999999999999 8999998754332221100 0000178888 89999999999999999999


Q ss_pred             EEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHh-cCCCEEEEecceeeeecC-CCCCCccccCCCCCchhh------
Q 023689           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKR-FGVRRVVVTSSISAIVPN-PGWKGKVFDETSWTDLEY------  156 (278)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~-~~~~~~v~~Ss~~~~~~~-~~~~~~~~~E~~~~~~~~------  156 (278)
                      ||+|+.....   .++...+++|+.++.+++++|++ .++++||++||.++++.. +.....+++|+++.....      
T Consensus        88 ih~A~~~~~~---~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  164 (342)
T 1y1p_A           88 AHIASVVSFS---NKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTL  164 (342)
T ss_dssp             EECCCCCSCC---SCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHS
T ss_pred             EEeCCCCCCC---CCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhccc
Confidence            9999976542   45778999999999999999985 578999999997776432 111125788887532110      


Q ss_pred             ----hhccCchhhhHHHHHHHHHHHHHHhc--CCceEEEecceeeCCCCCCCC--chhHHHHHHHhhCCCCcc-cc-ccc
Q 023689          157 ----CKSRKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQPYL--NASCAVLQQLLQGSKDTQ-EY-HWL  226 (278)
Q Consensus       157 ----~~~~~~~y~~sK~~~e~~~~~~~~~~--~~~~~~lrp~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~-~~-~~~  226 (278)
                          ...+.+.|+.+|.++|.+++.+++++  +++++++||+.+||+......  .....++..+..+.+... +. +.+
T Consensus       165 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (342)
T 1y1p_A          165 PESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQ  244 (342)
T ss_dssp             CTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTCCSE
T ss_pred             cccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccccccCCcC
Confidence                01123689999999999999998765  789999999999999865432  256677777777776543 22 578


Q ss_pred             CcccHHHHHHHHHhhhcCCCCCc-eEEecCccccHHHHHHHHHHhCCCC
Q 023689          227 GAVPVKDVAKAQVLLFESPAASG-RYLCTNGIYQFGDFAERVSKLFPEF  274 (278)
Q Consensus       227 ~~i~~~D~a~~~~~~~~~~~~~~-~~~~~~~~~s~~e~~~~i~~~~~~~  274 (278)
                      +++|++|+|++++.+++++...| .++++++.+|+.|+++.+.+.++..
T Consensus       245 ~~v~v~Dva~a~~~~~~~~~~~g~~~~~~g~~~s~~e~~~~i~~~~~~~  293 (342)
T 1y1p_A          245 YYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSK  293 (342)
T ss_dssp             EEEEHHHHHHHHHHHHHCTTCCSCEEEECCEEECHHHHHHHHHHHCTTS
T ss_pred             CEeEHHHHHHHHHHHHcCcccCCceEEEeCCCCCHHHHHHHHHHHCCCc
Confidence            99999999999999998765545 5666778899999999999999753

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=100.00  E-value=1.1e-37  Score=264.00  Aligned_cols=253  Identities=19%  Similarity=0.270  Sum_probs=196.0

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHC-CCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCCh-hhHHHHhcCccEEEEe
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS-GAVSRAVEGCKGVFHV   87 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~-g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~-~~~~~~~~~~d~vi~~   87 (278)
                      |+|||||||||||++++++|+++ |+ +|++++|+......+..     ..+++++.+|++|. +.+.++++++|+|||+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~d~vih~   74 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHY-EVYGLDIGSDAISRFLN-----HPHFHFVEGDISIHSEWIEYHVKKCDVVLPL   74 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTC-EEEEEESCCGGGGGGTT-----CTTEEEEECCTTTCSHHHHHHHHHCSEEEEC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCC-EEEEEeCCcchHHHhhc-----CCCeEEEeccccCcHHHHHhhccCCCEEEEc
Confidence            58999999999999999999998 88 89999997654333211     12789999999984 5788899999999999


Q ss_pred             cccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhh-hhccCchhhh
Q 023689           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEY-CKSRKKWYPV  166 (278)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~-~~~~~~~y~~  166 (278)
                      |+.........++...+++|+.++.+++++|++.+ ++||++||.+++....   ..+++|+++..+.. ...+.+.|+.
T Consensus        75 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~v~~SS~~v~g~~~---~~~~~e~~~~~~~~~~~~~~~~Y~~  150 (345)
T 2bll_A           75 VAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCS---DKYFDEDHSNLIVGPVNKPRWIYSV  150 (345)
T ss_dssp             BCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCC---CSSBCTTTCCCBCCCTTCGGGHHHH
T ss_pred             ccccCccchhcCHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecHHHcCCCC---CCCcCCcccccccCcccCcccccHH
Confidence            98754321223567789999999999999999988 8999999966543322   25677776532110 0122358999


Q ss_pred             HHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCC-------CchhHHHHHHHhhCCCCcc---cccccCcccHHHHHH
Q 023689          167 SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY-------LNASCAVLQQLLQGSKDTQ---EYHWLGAVPVKDVAK  236 (278)
Q Consensus       167 sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~-------~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~D~a~  236 (278)
                      +|..+|.+++.++++++++++++||+.+||+.....       ...+..++.....+.+...   +++.++++|++|+|+
T Consensus       151 sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~  230 (345)
T 2bll_A          151 SKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIE  230 (345)
T ss_dssp             HHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHHH
Confidence            999999999999888899999999999999986431       2345667777777776543   347889999999999


Q ss_pred             HHHhhhcCCC--C-CceEEecC-c-cccHHHHHHHHHHhCC
Q 023689          237 AQVLLFESPA--A-SGRYLCTN-G-IYQFGDFAERVSKLFP  272 (278)
Q Consensus       237 ~~~~~~~~~~--~-~~~~~~~~-~-~~s~~e~~~~i~~~~~  272 (278)
                      +++.+++++.  . +++|++++ + .+|+.|+++.+.+.++
T Consensus       231 a~~~~~~~~~~~~~g~~~~i~~~~~~~s~~e~~~~i~~~~g  271 (345)
T 2bll_A          231 ALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFE  271 (345)
T ss_dssp             HHHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHH
T ss_pred             HHHHHHhhccccCCCceEEeCCCCCCCCHHHHHHHHHHHhC
Confidence            9999998764  2 34687665 4 7999999999999764

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=100.00  E-value=9.5e-38  Score=269.98  Aligned_cols=260  Identities=18%  Similarity=0.169  Sum_probs=192.7

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCc-----------------ccccCCCCCCCceEEEEccC
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS-----------------HLFALPGAGDANLRVFEADV   68 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~-----------------~~~~~~~~~~~~v~~~~~Dl   68 (278)
                      ..+|++|||||||||||++|+++|+++|+ +|++++|......                 .+..+......+++++.+|+
T Consensus         8 ~~~~~~vlVTG~tGfIG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl   86 (404)
T 1i24_A            8 HHHGSRVMVIGGDGYCGWATALHLSKKNY-EVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDI   86 (404)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCT
T ss_pred             ccCCCeEEEeCCCcHHHHHHHHHHHhCCC-eEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCC
Confidence            34689999999999999999999999999 8999877432110                 00000000011788999999


Q ss_pred             CChhhHHHHhcC--ccEEEEecccCCCCCCCCch---hhhhhhHHhHHHHHHHHHHhcCC-CEEEEecceeeeecCCCCC
Q 023689           69 LDSGAVSRAVEG--CKGVFHVASPCTLEDPVDPE---KELILPAVQGTLNVLEAAKRFGV-RRVVVTSSISAIVPNPGWK  142 (278)
Q Consensus        69 ~d~~~~~~~~~~--~d~vi~~a~~~~~~~~~~~~---~~~~~~n~~~~~~ll~~~~~~~~-~~~v~~Ss~~~~~~~~~~~  142 (278)
                      +|++++.+++++  +|+|||+||.........++   ...+++|+.|+.+++++|++.++ ++||++||.++ |+...  
T Consensus        87 ~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~v-yg~~~--  163 (404)
T 1i24_A           87 CDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGE-YGTPN--  163 (404)
T ss_dssp             TSHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGG-GCCCS--
T ss_pred             CCHHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHH-hCCCC--
Confidence            999999999987  99999999875431111222   35789999999999999999887 59999999655 44322  


Q ss_pred             CccccCCCCCchh--------hhhccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCC------------
Q 023689          143 GKVFDETSWTDLE--------YCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY------------  202 (278)
Q Consensus       143 ~~~~~E~~~~~~~--------~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~------------  202 (278)
                       .+++|+.+....        ....+.+.|+.+|.++|.+++.+++++|++++++||+.||||.....            
T Consensus       164 -~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~  242 (404)
T 1i24_A          164 -IDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDY  242 (404)
T ss_dssp             -SCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCC
T ss_pred             -CCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCcccccccccccccc
Confidence             345665221000        01223468999999999999999888899999999999999976421            


Q ss_pred             ----CchhHHHHHHHhhCCCCcc---cccccCcccHHHHHHHHHhhhcCCCCCc---eEEecCccccHHHHHHHHHHh
Q 023689          203 ----LNASCAVLQQLLQGSKDTQ---EYHWLGAVPVKDVAKAQVLLFESPAASG---RYLCTNGIYQFGDFAERVSKL  270 (278)
Q Consensus       203 ----~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~D~a~~~~~~~~~~~~~~---~~~~~~~~~s~~e~~~~i~~~  270 (278)
                          ...+..++.....+.+...   +.+.++++|++|+|++++.+++++...|   +|+++++.+|+.|+++.+.+.
T Consensus       243 ~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~yni~~~~~s~~e~~~~i~~~  320 (404)
T 1i24_A          243 DAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKA  320 (404)
T ss_dssp             STTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHH
T ss_pred             ccchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcccCCCceEEEECCCCCcHHHHHHHHHHH
Confidence                2356777888888877643   3478999999999999999998765433   787776889999999999997

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=100.00  E-value=1.3e-37  Score=265.24  Aligned_cols=253  Identities=19%  Similarity=0.220  Sum_probs=196.3

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHC-CCCeEEEEecCCC--CCcccccCCCCCCCceEEEEccCCChhhHHHHhc--CccEE
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPGS--DSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGV   84 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~-g~~~v~~~~r~~~--~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~v   84 (278)
                      |+|||||||||||++|+++|++. |+ .|++++|+..  ..+.+..+..  ..+++++.+|++|++++.++++  ++|+|
T Consensus         1 MkvlVTGasG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v   77 (361)
T 1kew_A            1 MKILITGGAGFIGSAVVRHIIKNTQD-TVVNIDKLTYAGNLESLSDISE--SNRYNFEHADICDSAEITRIFEQYQPDAV   77 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSC-EEEEEECCCTTCCGGGGTTTTT--CTTEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CEEEEECCCchHhHHHHHHHHhcCCC-eEEEEecCCCCCchhhhhhhhc--CCCeEEEECCCCCHHHHHHHHhhcCCCEE
Confidence            47999999999999999999998 78 8999988652  2223322221  1278999999999999999998  89999


Q ss_pred             EEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhc--CCC-------EEEEecceeeeecCCCC-------CCccccC
Q 023689           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF--GVR-------RVVVTSSISAIVPNPGW-------KGKVFDE  148 (278)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~-------~~v~~Ss~~~~~~~~~~-------~~~~~~E  148 (278)
                      ||+|+........++++..+++|+.++.+++++|.+.  +++       +||++||.+++......       ...+++|
T Consensus        78 ih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E  157 (361)
T 1kew_A           78 MHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTE  157 (361)
T ss_dssp             EECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCT
T ss_pred             EECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCCCCC
Confidence            9999975432222456789999999999999999988  876       99999996654322110       0016777


Q ss_pred             CCCCchhhhhccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcc---cccc
Q 023689          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ---EYHW  225 (278)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~  225 (278)
                      +++..+      .+.|+.+|.++|.+++.++.+++++++++||+.+||+..... ..+..++.....+.+...   +.+.
T Consensus       158 ~~~~~~------~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  230 (361)
T 1kew_A          158 TTAYAP------SSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPE-KLIPLVILNALEGKPLPIYGKGDQI  230 (361)
T ss_dssp             TSCCCC------CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT-SHHHHHHHHHHHTCCEEEETTSCCE
T ss_pred             CCCCCC------CCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcc-cHHHHHHHHHHcCCCceEcCCCcee
Confidence            765544      368999999999999999988899999999999999986432 345566677777765443   3467


Q ss_pred             cCcccHHHHHHHHHhhhcCCCCCceEEec-CccccHHHHHHHHHHhCC
Q 023689          226 LGAVPVKDVAKAQVLLFESPAASGRYLCT-NGIYQFGDFAERVSKLFP  272 (278)
Q Consensus       226 ~~~i~~~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~i~~~~~  272 (278)
                      ++++|++|+|++++.++++...+++|+++ ++.+++.|+++.+.+.++
T Consensus       231 ~~~i~v~Dva~a~~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g  278 (361)
T 1kew_A          231 RDWLYVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLD  278 (361)
T ss_dssp             EEEEEHHHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHH
T ss_pred             EeeEEHHHHHHHHHHHHhCCCCCCEEEecCCCeeeHHHHHHHHHHHhC
Confidence            89999999999999999876544577665 567999999999998763

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=100.00  E-value=3.3e-38  Score=267.42  Aligned_cols=256  Identities=16%  Similarity=0.184  Sum_probs=191.0

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCC--cccccCCCCCCCceEEEEccCCChhhHHHHhcC--ccEE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS--SHLFALPGAGDANLRVFEADVLDSGAVSRAVEG--CKGV   84 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~--~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~--~d~v   84 (278)
                      ||+|||||||||||++|+++|++.|+ +|++++|.....  .....+.. . .+++++.+|++|++++.+++++  +|+|
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~l~~-~-~~~~~~~~Dl~d~~~~~~~~~~~~~d~v   77 (347)
T 1orr_A            1 MAKLLITGGCGFLGSNLASFALSQGI-DLIVFDNLSRKGATDNLHWLSS-L-GNFEFVHGDIRNKNDVTRLITKYMPDSC   77 (347)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSTTHHHHHHHHHT-T-CCCEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CcEEEEeCCCchhHHHHHHHHHhCCC-EEEEEeCCCccCchhhhhhhcc-C-CceEEEEcCCCCHHHHHHHHhccCCCEE
Confidence            57999999999999999999999999 899998753221  11111111 1 1688999999999999999988  9999


Q ss_pred             EEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCC-EEEEecceeeeecCCCC-------------CCccccCCC
Q 023689           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTSSISAIVPNPGW-------------KGKVFDETS  150 (278)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~-~~v~~Ss~~~~~~~~~~-------------~~~~~~E~~  150 (278)
                      ||+|+.........++...+++|+.++.+++++|++.+++ +||++||.+++......             ....++|+.
T Consensus        78 ih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~~  157 (347)
T 1orr_A           78 FHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDEST  157 (347)
T ss_dssp             EECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTS
T ss_pred             EECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCcccccccccccccccCccccC
Confidence            9999875432122356788999999999999999998875 99999996654332210             001244544


Q ss_pred             CCchhhhhccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCC--CchhHHHHHHHhhCC-----CCcc--
Q 023689          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY--LNASCAVLQQLLQGS-----KDTQ--  221 (278)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~--~~~~~~~~~~~~~~~-----~~~~--  221 (278)
                      +..+      .+.|+.+|.++|.+++.+++++|++++++||+.+||+.....  ...+..++.+...+.     +...  
T Consensus       158 ~~~~------~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  231 (347)
T 1orr_A          158 QLDF------HSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISG  231 (347)
T ss_dssp             CCCC------CHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEES
T ss_pred             CCCC------CCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEec
Confidence            4332      368999999999999999888899999999999999976432  123445555555554     3322  


Q ss_pred             -cccccCcccHHHHHHHHHhhhcCC-CCCc-eEEecCc---cccHHHHHHHHHHhCCC
Q 023689          222 -EYHWLGAVPVKDVAKAQVLLFESP-AASG-RYLCTNG---IYQFGDFAERVSKLFPE  273 (278)
Q Consensus       222 -~~~~~~~i~~~D~a~~~~~~~~~~-~~~~-~~~~~~~---~~s~~e~~~~i~~~~~~  273 (278)
                       +++.++++|++|+|++++.++++. ...| +|+++++   ++|+.|+++.+.+.++.
T Consensus       232 ~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~  289 (347)
T 1orr_A          232 NGKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNI  289 (347)
T ss_dssp             SSCCEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTC
T ss_pred             CCcceEeeEEHHHHHHHHHHHHhccccCCCCEEEeCCCCCCCccHHHHHHHHHHHhCC
Confidence             347889999999999999999852 2334 7877654   49999999999998853

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=100.00  E-value=1.8e-37  Score=264.05  Aligned_cols=249  Identities=17%  Similarity=0.158  Sum_probs=194.1

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCC-CCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc---
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNN-YTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---   79 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g-~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---   79 (278)
                      |..+++|+|||||||||||++|+++|+++| + +|++++|+..... ...+.     ++. +.+|++|++.+.++++   
T Consensus        41 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~-~V~~~~r~~~~~~-~~~~~-----~~~-~~~d~~~~~~~~~~~~~~~  112 (357)
T 2x6t_A           41 GSGIEGRMIIVTGGAGFIGSNIVKALNDKGIT-DILVVDNLKDGTK-FVNLV-----DLN-IADYMDKEDFLIQIMAGEE  112 (357)
T ss_dssp             -------CEEEETTTSHHHHHHHHHHHHTTCC-CEEEEECCSSGGG-GGGTT-----TSC-CSEEEEHHHHHHHHHTTCC
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHCCCc-EEEEEecCCCcch-hhccc-----Cce-EeeecCcHHHHHHHHhhcc
Confidence            445567899999999999999999999999 7 8999988664321 12221     223 6799999999999987   


Q ss_pred             --CccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhh
Q 023689           80 --GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYC  157 (278)
Q Consensus        80 --~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~  157 (278)
                        ++|+|||+|+....  ...++...+++|+.++.+++++|++.++ +||++||.+++....   ..+++|+++..+   
T Consensus       113 ~~~~d~Vih~A~~~~~--~~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS~~v~g~~~---~~~~~E~~~~~p---  183 (357)
T 2x6t_A          113 FGDVEAIFHEGACSST--TEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRT---SDFIESREYEKP---  183 (357)
T ss_dssp             CSSCCEEEECCSCCCT--TCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGCSCS---SCCCSSGGGCCC---
T ss_pred             cCCCCEEEECCcccCC--ccCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcchHHhCCCC---CCCcCCcCCCCC---
Confidence              59999999997554  3456788999999999999999999888 999999976543322   246777765444   


Q ss_pred             hccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCC---CchhHHHHHHHhhCCCCcc---ccc-ccCccc
Q 023689          158 KSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY---LNASCAVLQQLLQGSKDTQ---EYH-WLGAVP  230 (278)
Q Consensus       158 ~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~---~~~~~~~~~~~~~~~~~~~---~~~-~~~~i~  230 (278)
                         .+.|+.+|.++|.+++.++.+++++++++||+.+||+.....   ...+..++.....+.+...   +.+ .++++|
T Consensus       184 ---~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  260 (357)
T 2x6t_A          184 ---LNVFGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVY  260 (357)
T ss_dssp             ---SSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEE
T ss_pred             ---CChhHHHHHHHHHHHHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEE
Confidence               368999999999999999888899999999999999976532   2345666777777776543   236 789999


Q ss_pred             HHHHHHHHHhhhcCCCCCceEEe-cCccccHHHHHHHHHHhCCC
Q 023689          231 VKDVAKAQVLLFESPAASGRYLC-TNGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       231 ~~D~a~~~~~~~~~~~~~~~~~~-~~~~~s~~e~~~~i~~~~~~  273 (278)
                      ++|+|++++.+++++. +++|++ +++.+++.|+++.+.+.++.
T Consensus       261 v~Dva~ai~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~  303 (357)
T 2x6t_A          261 VGDVADVNLWFLENGV-SGIFNLGTGRAESFQAVADATLAYHKK  303 (357)
T ss_dssp             HHHHHHHHHHHHHHCC-CEEEEESCSCCEEHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHhcCC-CCeEEecCCCcccHHHHHHHHHHHcCC
Confidence            9999999999998766 567866 46789999999999998864

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=100.00  E-value=7.8e-38  Score=261.79  Aligned_cols=244  Identities=18%  Similarity=0.172  Sum_probs=189.0

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcC--ccEE
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG--CKGV   84 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~--~d~v   84 (278)
                      ++||+|||||||||||++|+++|+++|+       +...   ...        .++++.+|++|++++.+++++  +|+|
T Consensus         4 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-------~~~~---~~~--------~~~~~~~D~~d~~~~~~~~~~~~~d~V   65 (319)
T 4b8w_A            4 FQSMRILVTGGSGLVGKAIQKVVADGAG-------LPGE---DWV--------FVSSKDADLTDTAQTRALFEKVQPTHV   65 (319)
T ss_dssp             CCCCEEEEETCSSHHHHHHHHHHHTTTC-------CTTC---EEE--------ECCTTTCCTTSHHHHHHHHHHSCCSEE
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhcCC-------cccc---ccc--------ccCceecccCCHHHHHHHHhhcCCCEE
Confidence            4578999999999999999999999997       1110   000        344556999999999999987  9999


Q ss_pred             EEecccCCC-CCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCc-
Q 023689           85 FHVASPCTL-EDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK-  162 (278)
Q Consensus        85 i~~a~~~~~-~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~-  162 (278)
                      ||+|+.... .....++...+++|+.++.+++++|++.++++|||+||.+++ +...  ..+++|+++....  ..+.. 
T Consensus        66 ih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vy-g~~~--~~~~~E~~~~~~~--~~p~~~  140 (319)
T 4b8w_A           66 IHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIF-PDKT--TYPIDETMIHNGP--PHNSNF  140 (319)
T ss_dssp             EECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGS-CSSC--CSSBCGGGGGBSC--CCSSSH
T ss_pred             EECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhc-CCCC--CCCccccccccCC--CCCCcc
Confidence            999997542 123456778899999999999999999999999999997554 4332  3678887632110  11123 


Q ss_pred             hhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCC---CchhHHHHHH----HhhCCCCcc---cccccCcccHH
Q 023689          163 WYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY---LNASCAVLQQ----LLQGSKDTQ---EYHWLGAVPVK  232 (278)
Q Consensus       163 ~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~---~~~~~~~~~~----~~~~~~~~~---~~~~~~~i~~~  232 (278)
                      .|+.+|.++|++++.++++++++++++||+.+|||.....   ...+..++.+    ...+.+...   +.+.++++|++
T Consensus       141 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~  220 (319)
T 4b8w_A          141 GYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSL  220 (319)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHH
T ss_pred             hHHHHHHHHHHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHH
Confidence            5999999999999999988999999999999999987532   2345555555    667776554   34789999999


Q ss_pred             HHHHHHHhhhcCCCC--CceEEe-cCccccHHHHHHHHHHhCCC
Q 023689          233 DVAKAQVLLFESPAA--SGRYLC-TNGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       233 D~a~~~~~~~~~~~~--~~~~~~-~~~~~s~~e~~~~i~~~~~~  273 (278)
                      |+|++++.+++++..  +++|++ +++.+|+.|+++.+.+.++.
T Consensus       221 Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~  264 (319)
T 4b8w_A          221 DLAQLFIWVLREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDF  264 (319)
T ss_dssp             HHHHHHHHHHHHCCCSSCEEECCCGGGCEEHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHhccccCCceEEEecCCCceeHHHHHHHHHHHhCC
Confidence            999999999987543  236754 57899999999999999863

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=2.4e-37  Score=247.04  Aligned_cols=221  Identities=19%  Similarity=0.228  Sum_probs=172.8

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEec
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a   88 (278)
                      ||+|||||||||||++++++|+++|+ +|++++|+++....+.       .+++++.+|++|++++.++++++|+|||+|
T Consensus         4 m~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~-------~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a   75 (227)
T 3dhn_A            4 VKKIVLIGASGFVGSALLNEALNRGF-EVTAVVRHPEKIKIEN-------EHLKVKKADVSSLDEVCEVCKGADAVISAF   75 (227)
T ss_dssp             CCEEEEETCCHHHHHHHHHHHHTTTC-EEEEECSCGGGCCCCC-------TTEEEECCCTTCHHHHHHHHTTCSEEEECC
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEEcCcccchhcc-------CceEEEEecCCCHHHHHHHhcCCCEEEEeC
Confidence            58999999999999999999999998 9999999876544332       189999999999999999999999999999


Q ss_pred             ccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhhHH
Q 023689           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK  168 (278)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK  168 (278)
                      +...     . ....+++|+.++.+++++|++.++++||++||.+++++.++.    ..|+.+..+      .+.|+.+|
T Consensus        76 ~~~~-----~-~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~----~~~~~~~~p------~~~Y~~sK  139 (227)
T 3dhn_A           76 NPGW-----N-NPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPGL----RLMDSGEVP------ENILPGVK  139 (227)
T ss_dssp             CC------------CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETTE----EGGGTTCSC------GGGHHHHH
T ss_pred             cCCC-----C-ChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCCC----ccccCCcch------HHHHHHHH
Confidence            7642     1 234899999999999999999999999999998877665432    233333333      26799999


Q ss_pred             HHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHHHHHHHHHhhhcCCCCC
Q 023689          169 TLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAAS  248 (278)
Q Consensus       169 ~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~  248 (278)
                      ..+|.+++.++++++++++++||+.+||+........        ..+.........++++|++|+|++++.+++++...
T Consensus       140 ~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~--------~~~~~~~~~~~~~~~i~~~Dva~ai~~~l~~~~~~  211 (227)
T 3dhn_A          140 ALGEFYLNFLMKEKEIDWVFFSPAADMRPGVRTGRYR--------LGKDDMIVDIVGNSHISVEDYAAAMIDELEHPKHH  211 (227)
T ss_dssp             HHHHHHHHTGGGCCSSEEEEEECCSEEESCCCCCCCE--------EESSBCCCCTTSCCEEEHHHHHHHHHHHHHSCCCC
T ss_pred             HHHHHHHHHHhhccCccEEEEeCCcccCCCcccccee--------ecCCCcccCCCCCcEEeHHHHHHHHHHHHhCcccc
Confidence            9999999888878899999999999999976543111        11222222223489999999999999999998876


Q ss_pred             c-eE-EecCccccHH
Q 023689          249 G-RY-LCTNGIYQFG  261 (278)
Q Consensus       249 ~-~~-~~~~~~~s~~  261 (278)
                      | +| +.++++.++.
T Consensus       212 g~~~~~~~~~~~~~~  226 (227)
T 3dhn_A          212 QERFTIGYLEHHHHH  226 (227)
T ss_dssp             SEEEEEECCSCCC--
T ss_pred             CcEEEEEeehhcccC
Confidence            6 66 5567777764

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=1.7e-36  Score=259.29  Aligned_cols=253  Identities=16%  Similarity=0.155  Sum_probs=195.1

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCC--cccccCCCC---CCCceEEEEccCCChhhHHHHhcC--c
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS--SHLFALPGA---GDANLRVFEADVLDSGAVSRAVEG--C   81 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~--~~~~~~~~~---~~~~v~~~~~Dl~d~~~~~~~~~~--~   81 (278)
                      ||+|||||||||||++++++|+++|+ +|++++|+....  ..+..+...   ...+++++.+|++|++++.+++++  +
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   79 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGY-EVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQP   79 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCC
Confidence            58999999999999999999999999 899998875431  122221110   012788999999999999999885  6


Q ss_pred             cEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCC---CEEEEecceeeeecCCCCCCccccCCCCCchhhhh
Q 023689           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV---RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCK  158 (278)
Q Consensus        82 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~---~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~  158 (278)
                      |+|||+|+........+++...+++|+.++.+++++|++.++   ++||++||.+++.. ..  ..+++|+++..+    
T Consensus        80 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~-~~--~~~~~E~~~~~~----  152 (372)
T 1db3_A           80 DEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGL-VQ--EIPQKETTPFYP----  152 (372)
T ss_dssp             SEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTT-CC--SSSBCTTSCCCC----
T ss_pred             CEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCC-CC--CCCCCccCCCCC----
Confidence            999999997665445566788899999999999999999887   79999999665433 22  256788876554    


Q ss_pred             ccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCC--chhHHHHHHHhhCCCC--cc--cccccCcccHH
Q 023689          159 SRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL--NASCAVLQQLLQGSKD--TQ--EYHWLGAVPVK  232 (278)
Q Consensus       159 ~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~--~~~~~~~~~~~~~~~~--~~--~~~~~~~i~~~  232 (278)
                        .+.|+.+|.++|.+++.++.+++++++++|++++|||......  ..+..++.....|.+.  ..  +++.++++|++
T Consensus       153 --~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~  230 (372)
T 1db3_A          153 --RSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAK  230 (372)
T ss_dssp             --CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHH
T ss_pred             --CChHHHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHH
Confidence              3689999999999999999888999999999999999764431  2234555566666542  22  35789999999


Q ss_pred             HHHHHHHhhhcCCCCCceEEe-cCccccHHHHHHHHHHhCC
Q 023689          233 DVAKAQVLLFESPAASGRYLC-TNGIYQFGDFAERVSKLFP  272 (278)
Q Consensus       233 D~a~~~~~~~~~~~~~~~~~~-~~~~~s~~e~~~~i~~~~~  272 (278)
                      |+|++++.+++++. .++|++ +++.+|+.|+++.+.+.++
T Consensus       231 Dva~a~~~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g  270 (372)
T 1db3_A          231 DYVKMQWMMLQQEQ-PEDFVIATGVQYSVRQFVEMAAAQLG  270 (372)
T ss_dssp             HHHHHHHHTTSSSS-CCCEEECCCCCEEHHHHHHHHHHTTT
T ss_pred             HHHHHHHHHHhcCC-CceEEEcCCCceeHHHHHHHHHHHhC
Confidence            99999999998755 367755 5678999999999999885

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=7.4e-37  Score=261.92  Aligned_cols=253  Identities=16%  Similarity=0.140  Sum_probs=196.5

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCC--cccccCCCC----CCCceEEEEccCCChhhHHHHhcC--c
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS--SHLFALPGA----GDANLRVFEADVLDSGAVSRAVEG--C   81 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~--~~~~~~~~~----~~~~v~~~~~Dl~d~~~~~~~~~~--~   81 (278)
                      |+|||||||||||++|+++|+++|+ +|++++|+....  ..+..+...    ...+++++.+|++|++++.+++++  +
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~  103 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGY-EVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP  103 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcCC
Confidence            7899999999999999999999999 899999876431  112221100    112789999999999999999985  6


Q ss_pred             cEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCC---CEEEEecceeeeecCCCCCCccccCCCCCchhhhh
Q 023689           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV---RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCK  158 (278)
Q Consensus        82 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~---~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~  158 (278)
                      |+|||+|+.........++...+++|+.++.+++++|++.++   ++||++||.+++....   ..+++|+++..+    
T Consensus       104 d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~---~~~~~E~~~~~~----  176 (375)
T 1t2a_A          104 TEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQ---EIPQKETTPFYP----  176 (375)
T ss_dssp             SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCS---SSSBCTTSCCCC----
T ss_pred             CEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCC---CCCCCccCCCCC----
Confidence            999999987543212245678899999999999999999887   8999999976654322   257888876544    


Q ss_pred             ccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCC--chhHHHHHHHhhCCCCc--c--cccccCcccHH
Q 023689          159 SRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL--NASCAVLQQLLQGSKDT--Q--EYHWLGAVPVK  232 (278)
Q Consensus       159 ~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~--~--~~~~~~~i~~~  232 (278)
                        .+.|+.+|.++|.+++.++.+++++++++||+.+|||......  ..+..++.....+....  .  +++.++++|++
T Consensus       177 --~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~  254 (375)
T 1t2a_A          177 --RSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAK  254 (375)
T ss_dssp             --CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHH
T ss_pred             --CChhHHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEEHH
Confidence              2689999999999999999888999999999999999754331  22344555666665432  2  34789999999


Q ss_pred             HHHHHHHhhhcCCCCCceEEe-cCccccHHHHHHHHHHhCCC
Q 023689          233 DVAKAQVLLFESPAASGRYLC-TNGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       233 D~a~~~~~~~~~~~~~~~~~~-~~~~~s~~e~~~~i~~~~~~  273 (278)
                      |+|++++.+++++.. ++|++ +++.+|+.|+++.+.+.++.
T Consensus       255 Dva~a~~~~~~~~~~-~~~ni~~~~~~s~~e~~~~i~~~~g~  295 (375)
T 1t2a_A          255 DYVEAMWLMLQNDEP-EDFVIATGEVHSVREFVEKSFLHIGK  295 (375)
T ss_dssp             HHHHHHHHHHHSSSC-CCEEECCSCCEEHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHhcCCC-ceEEEeCCCcccHHHHHHHHHHHhCC
Confidence            999999999987653 67754 56789999999999999864

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=100.00  E-value=1.4e-37  Score=263.76  Aligned_cols=255  Identities=22%  Similarity=0.200  Sum_probs=191.2

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCC-------CcccccCCCCCCCceEEEEccCCChhhHHHHhc--
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-------SSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--   79 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~-------~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--   79 (278)
                      +|+|||||||||||++|+++|+++|+ +|++++|+...       .+.+..+......+++++.+|++|++++.++++  
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~   80 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGY-LPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY   80 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTC-CEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhc
Confidence            37999999999999999999999999 89998875433       111111100001178899999999999999998  


Q ss_pred             CccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhc
Q 023689           80 GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKS  159 (278)
Q Consensus        80 ~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~  159 (278)
                      ++|+|||+|+.........++...+++|+.++.+++++|++.++++||++||.+++ +...  ..+++|+++..+.    
T Consensus        81 ~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~-g~~~--~~~~~E~~~~~p~----  153 (348)
T 1ek6_A           81 SFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVY-GNPQ--YLPLDEAHPTGGC----  153 (348)
T ss_dssp             CEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGG-CSCS--SSSBCTTSCCCCC----
T ss_pred             CCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHh-CCCC--CCCcCCCCCCCCC----
Confidence            89999999987543212245678899999999999999999999999999996654 3332  3678888765441    


Q ss_pred             cCchhhhHHHHHHHHHHHHHHh-cCCceEEEecceeeCCCCCC---------CCchhHHHHHHHh-hCCCCc--------
Q 023689          160 RKKWYPVSKTLAEKAAWEFAEK-HGVDVVAIHPATCLGPLMQP---------YLNASCAVLQQLL-QGSKDT--------  220 (278)
Q Consensus       160 ~~~~y~~sK~~~e~~~~~~~~~-~~~~~~~lrp~~i~g~~~~~---------~~~~~~~~~~~~~-~~~~~~--------  220 (278)
                       .+.|+.+|.++|.+++.++++ .+++++++||+++||+....         .......++.... .+.++.        
T Consensus       154 -~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  232 (348)
T 1ek6_A          154 -TNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDT  232 (348)
T ss_dssp             -SSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSS
T ss_pred             -CCchHHHHHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccC
Confidence             368999999999999999876 23999999999999995311         1123444444443 343322        


Q ss_pred             -ccccccCcccHHHHHHHHHhhhcCC--CCC-ceEEe-cCccccHHHHHHHHHHhCC
Q 023689          221 -QEYHWLGAVPVKDVAKAQVLLFESP--AAS-GRYLC-TNGIYQFGDFAERVSKLFP  272 (278)
Q Consensus       221 -~~~~~~~~i~~~D~a~~~~~~~~~~--~~~-~~~~~-~~~~~s~~e~~~~i~~~~~  272 (278)
                       .+++.++++|++|+|++++.+++++  ..+ ++|++ +++.+|++|+++.+.+.++
T Consensus       233 ~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~s~~e~~~~i~~~~g  289 (348)
T 1ek6_A          233 EDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASG  289 (348)
T ss_dssp             SSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHC
T ss_pred             CCCceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCCCCccHHHHHHHHHHHhC
Confidence             2346789999999999999999765  233 47866 4678999999999999885

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=100.00  E-value=1.6e-37  Score=256.49  Aligned_cols=226  Identities=15%  Similarity=0.114  Sum_probs=179.9

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcC-ccEEEEe
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG-CKGVFHV   87 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~-~d~vi~~   87 (278)
                      ||+||||| +||||++|+++|+++|+ +|++++|+.+...          .+++++.+|++|++++.+++++ +|+|||+
T Consensus         3 ~~~ilVtG-aG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~----------~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~   70 (286)
T 3gpi_A            3 LSKILIAG-CGDLGLELARRLTAQGH-EVTGLRRSAQPMP----------AGVQTLIADVTRPDTLASIVHLRPEILVYC   70 (286)
T ss_dssp             CCCEEEEC-CSHHHHHHHHHHHHTTC-CEEEEECTTSCCC----------TTCCEEECCTTCGGGCTTGGGGCCSEEEEC
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHCCC-EEEEEeCCccccc----------cCCceEEccCCChHHHHHhhcCCCCEEEEe
Confidence            57999999 59999999999999999 8999999765421          1888999999999999999987 9999999


Q ss_pred             cccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhhH
Q 023689           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVS  167 (278)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~s  167 (278)
                      |+...     .++...+++|+.++.+++++|++.++++||++||.+++ +...  ..+++|+++..|.      +.|+.+
T Consensus        71 a~~~~-----~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vy-g~~~--~~~~~E~~~~~p~------~~Y~~s  136 (286)
T 3gpi_A           71 VAASE-----YSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVY-GQEV--EEWLDEDTPPIAK------DFSGKR  136 (286)
T ss_dssp             HHHHH-----HC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGC-CCCC--SSEECTTSCCCCC------SHHHHH
T ss_pred             CCCCC-----CCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEE-cCCC--CCCCCCCCCCCCC------ChhhHH
Confidence            98633     34567889999999999999999999999999997654 4332  3678888876653      789999


Q ss_pred             HHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHHHHHHHHHhhhcCC--
Q 023689          168 KTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP--  245 (278)
Q Consensus       168 K~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~--  245 (278)
                      |.++|++ +.    + ++++++||+.+||+...       .++..+........++..++++|++|+|++++.+++++  
T Consensus       137 K~~~E~~-~~----~-~~~~ilR~~~v~G~~~~-------~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~  203 (286)
T 3gpi_A          137 MLEAEAL-LA----A-YSSTILRFSGIYGPGRL-------RMIRQAQTPEQWPARNAWTNRIHRDDGAAFIAYLIQQRSH  203 (286)
T ss_dssp             HHHHHHH-GG----G-SSEEEEEECEEEBTTBC-------HHHHHTTCGGGSCSSBCEECEEEHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHH-Hh----c-CCeEEEecccccCCCch-------hHHHHHHhcccCCCcCceeEEEEHHHHHHHHHHHHhhhcc
Confidence            9999998 53    3 99999999999999754       23333333111123457899999999999999999884  


Q ss_pred             -CCCceEEec-CccccHHHHHHHHHHhCCC
Q 023689          246 -AASGRYLCT-NGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       246 -~~~~~~~~~-~~~~s~~e~~~~i~~~~~~  273 (278)
                       ..+++|+++ ++.+|+.|+++.+.+.++.
T Consensus       204 ~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~  233 (286)
T 3gpi_A          204 AVPERLYIVTDNQPLPVHDLLRWLADRQGI  233 (286)
T ss_dssp             SCCCSEEEECCSCCEEHHHHHHHHHHHTTC
T ss_pred             CCCCceEEEeCCCCCCHHHHHHHHHHHcCC
Confidence             455678665 6789999999999999864

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=100.00  E-value=1.4e-36  Score=257.25  Aligned_cols=252  Identities=16%  Similarity=0.154  Sum_probs=196.8

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCc--ccccCCCCCCCceEEEEccCCChhhHHHHhcC--ccEE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS--HLFALPGAGDANLRVFEADVLDSGAVSRAVEG--CKGV   84 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~--~d~v   84 (278)
                      +|+|||||||||||++++++|+++|+ +|++++|+.....  .+..+..  ..+++++.+|++|++++.+++++  +|+|
T Consensus         3 ~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v   79 (345)
T 2z1m_A            3 GKRALITGIRGQDGAYLAKLLLEKGY-EVYGADRRSGEFASWRLKELGI--ENDVKIIHMDLLEFSNIIRTIEKVQPDEV   79 (345)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCCSTTTTHHHHHTTC--TTTEEECCCCTTCHHHHHHHHHHHCCSEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCCcccccccHhhccc--cCceeEEECCCCCHHHHHHHHHhcCCCEE
Confidence            57999999999999999999999999 9999998765432  2222211  12789999999999999999985  5999


Q ss_pred             EEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCC-CEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCch
Q 023689           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV-RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW  163 (278)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  163 (278)
                      ||+|+........+++...+++|+.++.+++++|++.++ ++||++||.+++.. ..  ..+++|+.+..+      .+.
T Consensus        80 ih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~-~~--~~~~~e~~~~~~------~~~  150 (345)
T 2z1m_A           80 YNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGK-VQ--EIPQTEKTPFYP------RSP  150 (345)
T ss_dssp             EECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCS-CS--SSSBCTTSCCCC------CSH
T ss_pred             EECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCC-CC--CCCCCccCCCCC------CCh
Confidence            999997543323456788999999999999999998886 89999999765433 22  256778776544      368


Q ss_pred             hhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCC--chhHHHHHHHhhCCCCc--c--cccccCcccHHHHHHH
Q 023689          164 YPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL--NASCAVLQQLLQGSKDT--Q--EYHWLGAVPVKDVAKA  237 (278)
Q Consensus       164 y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~--~--~~~~~~~i~~~D~a~~  237 (278)
                      |+.+|.++|.+++.++.+++++++++|++++|||......  ..+...+.+...+....  .  +.+.++++|++|+|++
T Consensus       151 Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a  230 (345)
T 2z1m_A          151 YAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEA  230 (345)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHH
Confidence            9999999999999999888999999999999999754321  12233444555564322  2  2367899999999999


Q ss_pred             HHhhhcCCCCCceEEe-cCccccHHHHHHHHHHhCCC
Q 023689          238 QVLLFESPAASGRYLC-TNGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       238 ~~~~~~~~~~~~~~~~-~~~~~s~~e~~~~i~~~~~~  273 (278)
                      ++.+++++.. +.|++ +++.+++.|+++.+.+.++.
T Consensus       231 ~~~~~~~~~~-~~~~i~~~~~~s~~e~~~~i~~~~g~  266 (345)
T 2z1m_A          231 MWLMMQQPEP-DDYVIATGETHTVREFVEKAAKIAGF  266 (345)
T ss_dssp             HHHHHTSSSC-CCEEECCSCCEEHHHHHHHHHHHTTC
T ss_pred             HHHHHhCCCC-ceEEEeCCCCccHHHHHHHHHHHhCC
Confidence            9999987653 67755 57789999999999999864

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=100.00  E-value=2.2e-36  Score=256.02  Aligned_cols=254  Identities=22%  Similarity=0.288  Sum_probs=192.0

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCC-cccccCCCCCCCceEEEEccCCChhhHHHHhcCccEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-SHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~-~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~v   84 (278)
                      .++||+|||||||||||++|+++|++.|+ +|++++|+.... ..+..+..  ..+++++.+|+.+..     +.++|+|
T Consensus        24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~-----~~~~d~v   95 (343)
T 2b69_A           24 EKDRKRILITGGAGFVGSHLTDKLMMDGH-EVTVVDNFFTGRKRNVEHWIG--HENFELINHDVVEPL-----YIEVDQI   95 (343)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCGGGTGGGTT--CTTEEEEECCTTSCC-----CCCCSEE
T ss_pred             ccCCCEEEEEcCccHHHHHHHHHHHHCCC-EEEEEeCCCccchhhhhhhcc--CCceEEEeCccCChh-----hcCCCEE
Confidence            45678999999999999999999999999 899999865432 12222211  127899999998863     5789999


Q ss_pred             EEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchh
Q 023689           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWY  164 (278)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y  164 (278)
                      ||+|+......+..++...+++|+.++.+++++|++.++ +||++||.+++ +...  ..+++|+.+....+ ..+.+.|
T Consensus        96 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~-g~~~--~~~~~E~~~~~~~~-~~~~~~Y  170 (343)
T 2b69_A           96 YHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVY-GDPE--VHPQSEDYWGHVNP-IGPRACY  170 (343)
T ss_dssp             EECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGG-BSCS--SSSBCTTCCCBCCS-SSTTHHH
T ss_pred             EECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-cEEEECcHHHh-CCCC--CCCCcccccccCCC-CCCCCch
Confidence            999987553222345678899999999999999999886 89999986554 3332  25677774322111 1223679


Q ss_pred             hhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCC-CchhHHHHHHHhhCCCCcc---cccccCcccHHHHHHHHHh
Q 023689          165 PVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY-LNASCAVLQQLLQGSKDTQ---EYHWLGAVPVKDVAKAQVL  240 (278)
Q Consensus       165 ~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~D~a~~~~~  240 (278)
                      +.+|.++|.+++.++++++++++++||+.+||+..... ...+..++.....+.+...   +++.++++|++|+|++++.
T Consensus       171 ~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~  250 (343)
T 2b69_A          171 DEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVA  250 (343)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHH
Confidence            99999999999999888899999999999999976432 2345666777777776543   3478899999999999999


Q ss_pred             hhcCCCCCceEEe-cCccccHHHHHHHHHHhCCC
Q 023689          241 LFESPAASGRYLC-TNGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       241 ~~~~~~~~~~~~~-~~~~~s~~e~~~~i~~~~~~  273 (278)
                      +++++. .+.|++ +++.+|+.|+++.+.+.++.
T Consensus       251 ~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~  283 (343)
T 2b69_A          251 LMNSNV-SSPVNLGNPEEHTILEFAQLIKNLVGS  283 (343)
T ss_dssp             HHTSSC-CSCEEESCCCEEEHHHHHHHHHHHHTC
T ss_pred             HHhcCC-CCeEEecCCCCCcHHHHHHHHHHHhCC
Confidence            987653 456755 56789999999999998853

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=100.00  E-value=1.2e-36  Score=262.59  Aligned_cols=256  Identities=20%  Similarity=0.197  Sum_probs=191.7

Q ss_pred             CceEEEeCcchhhHHHHHHHHH-HCCCCeEEEEecCCCCC---------ccc----ccCCCCC-CCc---eEEEEccCCC
Q 023689            9 EETVCVTGANGFIGTWLVKTLL-DNNYTSINATVFPGSDS---------SHL----FALPGAG-DAN---LRVFEADVLD   70 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~-~~g~~~v~~~~r~~~~~---------~~~----~~~~~~~-~~~---v~~~~~Dl~d   70 (278)
                      +|+|||||||||||++|+++|+ +.|+ .|++++|+....         ..+    ..+.... ..+   ++++.+|++|
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d   80 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNH-SVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRN   80 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCC-EEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCC-EEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCC
Confidence            3689999999999999999999 9999 899998865432         111    1111100 013   8899999999


Q ss_pred             hhhHHHHhc--C-ccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCC-----C
Q 023689           71 SGAVSRAVE--G-CKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGW-----K  142 (278)
Q Consensus        71 ~~~~~~~~~--~-~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~-----~  142 (278)
                      ++++.++++  + +|+|||+|+.........++...+++|+.++.+++++|++.++++||++||.+++ +....     .
T Consensus        81 ~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~-g~~~~~~~~~~  159 (397)
T 1gy8_A           81 EDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIF-GNPTMGSVSTN  159 (397)
T ss_dssp             HHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGT-BSCCC-----C
T ss_pred             HHHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHh-CCCCccccccc
Confidence            999999987  6 9999999987543212245678999999999999999999999999999996554 33220     1


Q ss_pred             CccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCC--------CCchhHHHH----
Q 023689          143 GKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQP--------YLNASCAVL----  210 (278)
Q Consensus       143 ~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~--------~~~~~~~~~----  210 (278)
                      ..+++|+++..+      .+.|+.+|.++|.+++.++.+++++++++||+.+||+....        ....+..++    
T Consensus       160 ~~~~~E~~~~~p------~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~  233 (397)
T 1gy8_A          160 AEPIDINAKKSP------ESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVM  233 (397)
T ss_dssp             CCCBCTTSCCBC------SSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHH
T ss_pred             ccCcCccCCCCC------CCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHH
Confidence            357888876544      36899999999999999998889999999999999997421        122333333    


Q ss_pred             HHHhhCCC------------Cc---------ccccccCcccHHHHHHHHHhhhcCCC-C-----C---ceEEe-cCcccc
Q 023689          211 QQLLQGSK------------DT---------QEYHWLGAVPVKDVAKAQVLLFESPA-A-----S---GRYLC-TNGIYQ  259 (278)
Q Consensus       211 ~~~~~~~~------------~~---------~~~~~~~~i~~~D~a~~~~~~~~~~~-~-----~---~~~~~-~~~~~s  259 (278)
                      .+...+..            +.         .+++.++++|++|+|++++.+++++. .     .   ++|++ +++.+|
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~~~~s  313 (397)
T 1gy8_A          234 SDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYS  313 (397)
T ss_dssp             HHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEE
T ss_pred             HHHHhcCccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCCCCccc
Confidence            14444432            21         23467899999999999999987642 1     2   57866 467899


Q ss_pred             HHHHHHHHHHhCC
Q 023689          260 FGDFAERVSKLFP  272 (278)
Q Consensus       260 ~~e~~~~i~~~~~  272 (278)
                      +.|+++.+.+.++
T Consensus       314 ~~e~~~~i~~~~g  326 (397)
T 1gy8_A          314 VREVIEVARKTTG  326 (397)
T ss_dssp             HHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHhC
Confidence            9999999999875

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=100.00  E-value=3.7e-37  Score=254.43  Aligned_cols=225  Identities=17%  Similarity=0.141  Sum_probs=186.5

Q ss_pred             Cc-eEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc--CccEEE
Q 023689            9 EE-TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVF   85 (278)
Q Consensus         9 ~~-~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vi   85 (278)
                      || +|||||||||||++++++|+++|+ +|++++|..                     +|++|.+++.++++  ++|+||
T Consensus         4 M~m~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~---------------------~D~~d~~~~~~~~~~~~~d~vi   61 (287)
T 3sc6_A            4 MKERVIITGANGQLGKQLQEELNPEEY-DIYPFDKKL---------------------LDITNISQVQQVVQEIRPHIII   61 (287)
T ss_dssp             -CEEEEEESTTSHHHHHHHHHSCTTTE-EEEEECTTT---------------------SCTTCHHHHHHHHHHHCCSEEE
T ss_pred             ceeEEEEECCCCHHHHHHHHHHHhCCC-EEEEecccc---------------------cCCCCHHHHHHHHHhcCCCEEE
Confidence            44 999999999999999999999999 999998821                     89999999999998  699999


Q ss_pred             EecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhh
Q 023689           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYP  165 (278)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~  165 (278)
                      |+|+......+..++...+++|+.++.+++++|++.++ +||++||.+++.+..   ..+++|+++..|.      +.|+
T Consensus        62 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS~~vy~~~~---~~~~~E~~~~~p~------~~Y~  131 (287)
T 3sc6_A           62 HCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGA-KLVYISTDYVFQGDR---PEGYDEFHNPAPI------NIYG  131 (287)
T ss_dssp             ECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCCCC---SSCBCTTSCCCCC------SHHH
T ss_pred             ECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchhhhcCCCC---CCCCCCCCCCCCC------CHHH
Confidence            99998665444467889999999999999999999987 799999976644332   3678898876553      7899


Q ss_pred             hHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcc-cccccCcccHHHHHHHHHhhhcC
Q 023689          166 VSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ-EYHWLGAVPVKDVAKAQVLLFES  244 (278)
Q Consensus       166 ~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~D~a~~~~~~~~~  244 (278)
                      .+|.++|.+++.+    +.+++++||+.+||+....   ....++.....+.+... +++.++++|++|+|++++.++++
T Consensus       132 ~sK~~~E~~~~~~----~~~~~ilR~~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~  204 (287)
T 3sc6_A          132 ASKYAGEQFVKEL----HNKYFIVRTSWLYGKYGNN---FVKTMIRLGKEREEISVVADQIGSPTYVADLNVMINKLIHT  204 (287)
T ss_dssp             HHHHHHHHHHHHH----CSSEEEEEECSEECSSSCC---HHHHHHHHHTTCSEEEEECSCEECCEEHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHh----CCCcEEEeeeeecCCCCCc---HHHHHHHHHHcCCCeEeecCcccCceEHHHHHHHHHHHHhC
Confidence            9999999999754    4578999999999987542   45566666666665544 55789999999999999999998


Q ss_pred             CCCCceEEec-CccccHHHHHHHHHHhCCC
Q 023689          245 PAASGRYLCT-NGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       245 ~~~~~~~~~~-~~~~s~~e~~~~i~~~~~~  273 (278)
                      +. .++|+++ ++.+|+.|+++.+.+.++.
T Consensus       205 ~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~  233 (287)
T 3sc6_A          205 SL-YGTYHVSNTGSCSWFEFAKKIFSYANM  233 (287)
T ss_dssp             CC-CEEEECCCBSCEEHHHHHHHHHHHHTC
T ss_pred             CC-CCeEEEcCCCcccHHHHHHHHHHHcCC
Confidence            77 6788665 5679999999999998853

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=100.00  E-value=6e-36  Score=252.02  Aligned_cols=242  Identities=21%  Similarity=0.206  Sum_probs=188.0

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccc-ccCCCCCCCceEEEEccCCChhhHHHHhc--Ccc
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL-FALPGAGDANLRVFEADVLDSGAVSRAVE--GCK   82 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~-~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d   82 (278)
                      .+++|+|||||||||||++|+++|+++|+ +|++++|+....... ..+     .+++++.+|++|++++.++++  ++|
T Consensus        17 ~~~~~~vlVTGasG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~l-----~~v~~~~~Dl~d~~~~~~~~~~~~~D   90 (330)
T 2pzm_A           17 RGSHMRILITGGAGCLGSNLIEHWLPQGH-EILVIDNFATGKREVLPPV-----AGLSVIEGSVTDAGLLERAFDSFKPT   90 (330)
T ss_dssp             TTTCCEEEEETTTSHHHHHHHHHHGGGTC-EEEEEECCSSSCGGGSCSC-----TTEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCCccchhhhhcc-----CCceEEEeeCCCHHHHHHHHhhcCCC
Confidence            34578999999999999999999999999 899999865433211 111     178999999999999999999  999


Q ss_pred             EEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCc
Q 023689           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK  162 (278)
Q Consensus        83 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  162 (278)
                      +|||+|+..... ...++.  +++|+.++.+++++|++.++++||++||.+++..... ...+++|++  .      +.+
T Consensus        91 ~vih~A~~~~~~-~~~~~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~-~~~~~~E~~--~------~~~  158 (330)
T 2pzm_A           91 HVVHSAAAYKDP-DDWAED--AATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPAT-VPIPIDSPT--A------PFT  158 (330)
T ss_dssp             EEEECCCCCSCT-TCHHHH--HHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCSCSS-SSBCTTCCC--C------CCS
T ss_pred             EEEECCccCCCc-cccChh--HHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCCCcc-CCCCcCCCC--C------CCC
Confidence            999999976543 223333  8999999999999999989999999999766433211 012677766  1      236


Q ss_pred             hhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccc-ccCcccHHHHHH-HHHh
Q 023689          163 WYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH-WLGAVPVKDVAK-AQVL  240 (278)
Q Consensus       163 ~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~D~a~-~~~~  240 (278)
                      .|+.+|.++|.+++.+    +++++++||+++|||...  ......++.....+. ...++. .++++|++|+|+ +++.
T Consensus       159 ~Y~~sK~~~e~~~~~~----~~~~~~iR~~~v~gp~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~Dva~~a~~~  231 (330)
T 2pzm_A          159 SYGISKTAGEAFLMMS----DVPVVSLRLANVTGPRLA--IGPIPTFYKRLKAGQ-KCFCSDTVRDFLDMSDFLAIADLS  231 (330)
T ss_dssp             HHHHHHHHHHHHHHTC----SSCEEEEEECEEECTTCC--SSHHHHHHHHHHTTC-CCCEESCEECEEEHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHc----CCCEEEEeeeeeECcCCC--CCHHHHHHHHHHcCC-EEeCCCCEecceeHHHHHHHHHHH
Confidence            8999999999998743    899999999999999852  234555566666665 333222 789999999999 9999


Q ss_pred             hhcCCCCCceEEec-CccccHHHHHHHHHHhCCC
Q 023689          241 LFESPAASGRYLCT-NGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       241 ~~~~~~~~~~~~~~-~~~~s~~e~~~~i~~~~~~  273 (278)
                      +++++. +++|+++ ++.++++|+++.+.+.++.
T Consensus       232 ~~~~~~-g~~~~v~~~~~~s~~e~~~~i~~~~g~  264 (330)
T 2pzm_A          232 LQEGRP-TGVFNVSTGEGHSIKEVFDVVLDYVGA  264 (330)
T ss_dssp             TSTTCC-CEEEEESCSCCEEHHHHHHHHHHHHTC
T ss_pred             HhhcCC-CCEEEeCCCCCCCHHHHHHHHHHHhCC
Confidence            998765 5577665 5689999999999998864

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=100.00  E-value=7.9e-36  Score=251.58  Aligned_cols=244  Identities=22%  Similarity=0.192  Sum_probs=186.1

Q ss_pred             cccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCC-cccccCCCCCCCceEEEEccCCChhhHHHHhcC--c
Q 023689            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-SHLFALPGAGDANLRVFEADVLDSGAVSRAVEG--C   81 (278)
Q Consensus         5 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~-~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~--~   81 (278)
                      ..++||+|||||||||||++|+++|+++|+ +|++++|+.... +.+..+     .+++++.+|++|++++.+++++  +
T Consensus        17 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~l~~~-----~~~~~~~~Dl~d~~~~~~~~~~~~~   90 (333)
T 2q1w_A           17 RGSHMKKVFITGICGQIGSHIAELLLERGD-KVVGIDNFATGRREHLKDH-----PNLTFVEGSIADHALVNQLIGDLQP   90 (333)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCGGGSCCC-----TTEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             ecCCCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEECCCccchhhHhhc-----CCceEEEEeCCCHHHHHHHHhccCC
Confidence            355789999999999999999999999999 999999875432 122211     1789999999999999999987  9


Q ss_pred             cEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccC
Q 023689           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRK  161 (278)
Q Consensus        82 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  161 (278)
                      |+|||+|+..... ...++.  +++|+.++.+++++|++.++++||++||.+++...+.....+++|++  .      +.
T Consensus        91 D~vih~A~~~~~~-~~~~~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~~~~~~~~~~~E~~--~------p~  159 (333)
T 2q1w_A           91 DAVVHTAASYKDP-DDWYND--TLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPVRLDHPR--N------PA  159 (333)
T ss_dssp             SEEEECCCCCSCT-TCHHHH--HHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCCSSSBCTTSCC--C------CT
T ss_pred             cEEEECceecCCC-ccCChH--HHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCcccCCCCcCCCC--C------CC
Confidence            9999999975542 222333  99999999999999999999999999996654311101112667765  1      12


Q ss_pred             -chhhhHHHHHHHHHHH-HHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHHHHHHHHH
Q 023689          162 -KWYPVSKTLAEKAAWE-FAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQV  239 (278)
Q Consensus       162 -~~y~~sK~~~e~~~~~-~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  239 (278)
                       +.|+.+|.++|.+++. ++     +++++||+.+||+...  ......++.....+.+...+.+.++++|++|+|++++
T Consensus       160 ~~~Y~~sK~~~E~~~~~s~~-----~~~ilR~~~v~gp~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~  232 (333)
T 2q1w_A          160 NSSYAISKSANEDYLEYSGL-----DFVTFRLANVVGPRNV--SGPLPIFFQRLSEGKKCFVTKARRDFVFVKDLARATV  232 (333)
T ss_dssp             TCHHHHHHHHHHHHHHHHTC-----CEEEEEESEEESTTCC--SSHHHHHHHHHHTTCCCEEEECEECEEEHHHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHhhhC-----CeEEEeeceEECcCCc--CcHHHHHHHHHHcCCeeeCCCceEeeEEHHHHHHHHH
Confidence             5799999999999875 43     8999999999999832  2345566666666652211457889999999999999


Q ss_pred             hhhcCCCCCceEEec-CccccHHHHHHHHHHhCCC
Q 023689          240 LLFESPAASGRYLCT-NGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       240 ~~~~~~~~~~~~~~~-~~~~s~~e~~~~i~~~~~~  273 (278)
                      .+++++. +++|+++ ++.+++.|+++.+.+.++.
T Consensus       233 ~~~~~~~-g~~~~v~~~~~~s~~e~~~~i~~~~g~  266 (333)
T 2q1w_A          233 RAVDGVG-HGAYHFSSGTDVAIKELYDAVVEAMAL  266 (333)
T ss_dssp             HHHTTCC-CEEEECSCSCCEEHHHHHHHHHHHTTC
T ss_pred             HHHhcCC-CCEEEeCCCCCccHHHHHHHHHHHhCC
Confidence            9998766 5578665 6789999999999999864

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=100.00  E-value=1.1e-36  Score=255.15  Aligned_cols=243  Identities=24%  Similarity=0.312  Sum_probs=189.8

Q ss_pred             eEEEeCcchhhHHHHHHHHHHC--CCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc--CccEEEE
Q 023689           11 TVCVTGANGFIGTWLVKTLLDN--NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFH   86 (278)
Q Consensus        11 ~vlItGatG~iG~~l~~~L~~~--g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vi~   86 (278)
                      +|||||||||||++|+++|+++  |+ +|++++|+.....           +++++.+|++|++++.++++  ++|+|||
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~-----------~~~~~~~D~~d~~~~~~~~~~~~~d~vih   68 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKK-NVIASDIVQRDTG-----------GIKFITLDVSNRDEIDRAVEKYSIDAIFH   68 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGG-GEEEEESSCCCCT-----------TCCEEECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCC-EEEEecCCCcccc-----------CceEEEecCCCHHHHHHHHhhcCCcEEEE
Confidence            5899999999999999999998  78 8988888654321           45688999999999999998  8999999


Q ss_pred             ecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhh
Q 023689           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPV  166 (278)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~  166 (278)
                      +|+..... ...++...+++|+.++.+++++|++.++++||++||.+++.....  ..+.+|+++..+      .+.|+.
T Consensus        69 ~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~--~~~~~e~~~~~p------~~~Y~~  139 (317)
T 3ajr_A           69 LAGILSAK-GEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETP--KNKVPSITITRP------RTMFGV  139 (317)
T ss_dssp             CCCCCHHH-HHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSC--SSSBCSSSCCCC------CSHHHH
T ss_pred             CCcccCCc-cccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCC--CCCccccccCCC------CchHHH
Confidence            99864321 123567889999999999999999999999999999776543221  245667665444      378999


Q ss_pred             HHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCC---CchhHHHHHHHhhCCCC-cc--cccccCcccHHHHHHHHHh
Q 023689          167 SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY---LNASCAVLQQLLQGSKD-TQ--EYHWLGAVPVKDVAKAQVL  240 (278)
Q Consensus       167 sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~---~~~~~~~~~~~~~~~~~-~~--~~~~~~~i~~~D~a~~~~~  240 (278)
                      +|.++|.+++.++++++++++++||+.+||+...+.   .......+.+...+.+. ..  +++.++++|++|+|++++.
T Consensus       140 sK~~~e~~~~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~  219 (317)
T 3ajr_A          140 TKIAAELLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVD  219 (317)
T ss_dssp             HHHHHHHHHHHHHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHHHH
Confidence            999999999999888899999999999999764322   12233333333333332 22  4578999999999999999


Q ss_pred             hhcCCCC----CceEEecCccccHHHHHHHHHHhCCCC
Q 023689          241 LFESPAA----SGRYLCTNGIYQFGDFAERVSKLFPEF  274 (278)
Q Consensus       241 ~~~~~~~----~~~~~~~~~~~s~~e~~~~i~~~~~~~  274 (278)
                      +++++..    +++|+++++.+|+.|+++.+.+.+|+.
T Consensus       220 ~l~~~~~~~~~g~~~~i~~~~~s~~e~~~~i~~~~~~~  257 (317)
T 3ajr_A          220 LYEADRDKLVLRNGYNVTAYTFTPSELYSKIKERIPEF  257 (317)
T ss_dssp             HHHCCGGGCSSCSCEECCSEEECHHHHHHHHHTTCCSC
T ss_pred             HHhCCccccccCceEecCCccccHHHHHHHHHHHCCcc
Confidence            9987643    257888878899999999999998743

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=100.00  E-value=3e-37  Score=261.07  Aligned_cols=235  Identities=16%  Similarity=0.138  Sum_probs=189.5

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHC-CCCeEEEEecCCCCCccccc-CCCCCCCceEEEEccCCChhhHHHHhcCccEE
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~-g~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~v   84 (278)
                      +++|+|||||||||||++++++|++. |+.+|++++|++.....+.. +.   ..+++++.+|++|.+++.++++++|+|
T Consensus        19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~---~~~v~~~~~Dl~d~~~l~~~~~~~D~V   95 (344)
T 2gn4_A           19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN---DPRMRFFIGDVRDLERLNYALEGVDIC   95 (344)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC---CTTEEEEECCTTCHHHHHHHTTTCSEE
T ss_pred             hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc---CCCEEEEECCCCCHHHHHHHHhcCCEE
Confidence            35689999999999999999999999 96589999987544322211 11   127999999999999999999999999


Q ss_pred             EEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchh
Q 023689           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWY  164 (278)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y  164 (278)
                      ||+|+..........+.+.+++|+.|+.+++++|.+.++++||++||..++.+                       .+.|
T Consensus        96 ih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~~p-----------------------~~~Y  152 (344)
T 2gn4_A           96 IHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAANP-----------------------INLY  152 (344)
T ss_dssp             EECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSSC-----------------------CSHH
T ss_pred             EECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccCCC-----------------------ccHH
Confidence            99999755322223457899999999999999999999999999999654321                       1579


Q ss_pred             hhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCC-CCcc--cccccCcccHHHHHHHH
Q 023689          165 PVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGS-KDTQ--EYHWLGAVPVKDVAKAQ  238 (278)
Q Consensus       165 ~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~i~~~D~a~~~  238 (278)
                      +.+|.++|.+++.+++.   +|++++++|||++||+..    ..+..++.....|. +..+  +...++++|++|+|+++
T Consensus       153 ~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~----~~i~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~a~~v  228 (344)
T 2gn4_A          153 GATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRG----SVVPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFV  228 (344)
T ss_dssp             HHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTT----SHHHHHHHHHHHTCCCEEESCTTCEEEEECHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCC----CHHHHHHHHHHcCCCceEEeCCCeEEeeEEHHHHHHHH
Confidence            99999999999988753   589999999999999863    24556666777776 5444  34678899999999999


Q ss_pred             HhhhcCCCCCceEEecCccccHHHHHHHHHHhC
Q 023689          239 VLLFESPAASGRYLCTNGIYQFGDFAERVSKLF  271 (278)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~  271 (278)
                      +.++++...+.+|++++..+++.|+++.+.+.+
T Consensus       229 ~~~l~~~~~g~~~~~~~~~~s~~el~~~i~~~~  261 (344)
T 2gn4_A          229 LKSLKRMHGGEIFVPKIPSMKMTDLAKALAPNT  261 (344)
T ss_dssp             HHHHHHCCSSCEEEECCCEEEHHHHHHHHCTTC
T ss_pred             HHHHhhccCCCEEecCCCcEEHHHHHHHHHHhC
Confidence            999987654447888877899999999998765

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=100.00  E-value=1e-36  Score=255.75  Aligned_cols=240  Identities=16%  Similarity=0.143  Sum_probs=186.2

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc--CccEEEE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFH   86 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vi~   86 (278)
                      +|+|||||||||||++|+++|+++|+ .|+++.|+.                    .+|++|++++.++++  ++|+|||
T Consensus         3 ~~~ilVtGatG~iG~~l~~~L~~~g~-~v~~~~r~~--------------------~~D~~d~~~~~~~~~~~~~d~vih   61 (321)
T 1e6u_A            3 KQRVFIAGHRGMVGSAIRRQLEQRGD-VELVLRTRD--------------------ELNLLDSRAVHDFFASERIDQVYL   61 (321)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTT-EEEECCCTT--------------------TCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEecCc--------------------cCCccCHHHHHHHHHhcCCCEEEE
Confidence            47999999999999999999999999 788776642                    179999999999999  8999999


Q ss_pred             ecccCCC-CCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhh
Q 023689           87 VASPCTL-EDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYP  165 (278)
Q Consensus        87 ~a~~~~~-~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~  165 (278)
                      +|+.... .....++...+++|+.++.+++++|++.++++||++||.+++... .  ..+++|+++..... .+..+.|+
T Consensus        62 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~~-~--~~~~~E~~~~~~~~-~p~~~~Y~  137 (321)
T 1e6u_A           62 AAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKL-A--KQPMAESELLQGTL-EPTNEPYA  137 (321)
T ss_dssp             CCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTT-C--CSSBCGGGTTSSCC-CGGGHHHH
T ss_pred             cCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcCCC-C--CCCcCccccccCCC-CCCCCccH
Confidence            9987532 111235678899999999999999999999999999996664432 2  25677776321100 01114799


Q ss_pred             hHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCC---CchhHHHHHHHhh----C-CCCc-c--cccccCcccHHHH
Q 023689          166 VSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY---LNASCAVLQQLLQ----G-SKDT-Q--EYHWLGAVPVKDV  234 (278)
Q Consensus       166 ~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~---~~~~~~~~~~~~~----~-~~~~-~--~~~~~~~i~~~D~  234 (278)
                      .+|..+|.+++.++++++++++++||+.+||+.....   ...+..++.....    | .+.. .  +++.++++|++|+
T Consensus       138 ~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dv  217 (321)
T 1e6u_A          138 IAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDM  217 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHH
Confidence            9999999999999888899999999999999986532   1345555655543    3 3332 2  4478999999999


Q ss_pred             HHHHHhhhcCCCC---------CceEEe-cCccccHHHHHHHHHHhCCC
Q 023689          235 AKAQVLLFESPAA---------SGRYLC-TNGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       235 a~~~~~~~~~~~~---------~~~~~~-~~~~~s~~e~~~~i~~~~~~  273 (278)
                      |++++.+++++..         +++|++ +++.+|+.|+++.+.+.++.
T Consensus       218 a~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~  266 (321)
T 1e6u_A          218 AAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGY  266 (321)
T ss_dssp             HHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHhCcccccccccccCCceEEeCCCCCccHHHHHHHHHHHhCC
Confidence            9999999987654         357765 56789999999999998753

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=100.00  E-value=2.9e-36  Score=255.17  Aligned_cols=249  Identities=16%  Similarity=0.091  Sum_probs=196.7

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCC-------CCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNN-------YTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE   79 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g-------~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~   79 (278)
                      +++|+|||||||||||++|+++|+++|       + +|++++|+.......      ...+++++.+|++|++++.++++
T Consensus        12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~-~V~~~~r~~~~~~~~------~~~~~~~~~~Dl~d~~~~~~~~~   84 (342)
T 2hrz_A           12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVE-KFTLIDVFQPEAPAG------FSGAVDARAADLSAPGEAEKLVE   84 (342)
T ss_dssp             CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEE-EEEEEESSCCCCCTT------CCSEEEEEECCTTSTTHHHHHHH
T ss_pred             ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCc-eEEEEEccCCccccc------cCCceeEEEcCCCCHHHHHHHHh
Confidence            567899999999999999999999999       6 899999876433210      11278999999999999999985


Q ss_pred             -CccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcC-----CCEEEEecceeeeecCCCCCCccccCCCCCc
Q 023689           80 -GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-----VRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (278)
Q Consensus        80 -~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-----~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~  153 (278)
                       ++|+|||+|+.... ...+++...+++|+.++.+++++|++.+     +++||++||.+++.. ..  ..+++|+++..
T Consensus        85 ~~~d~vih~A~~~~~-~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~-~~--~~~~~E~~~~~  160 (342)
T 2hrz_A           85 ARPDVIFHLAAIVSG-EAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGA-PL--PYPIPDEFHTT  160 (342)
T ss_dssp             TCCSEEEECCCCCHH-HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCS-SC--CSSBCTTCCCC
T ss_pred             cCCCEEEECCccCcc-cccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCC-CC--CCCcCCCCCCC
Confidence             89999999987542 1124567889999999999999998876     789999999765433 22  25788888765


Q ss_pred             hhhhhccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeC-CCCCCC--CchhHHHHHHHhhCCCCcc---cccccC
Q 023689          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLG-PLMQPY--LNASCAVLQQLLQGSKDTQ---EYHWLG  227 (278)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g-~~~~~~--~~~~~~~~~~~~~~~~~~~---~~~~~~  227 (278)
                      +.      +.|+.+|.++|.+++.++++.+++.+++|++.+|| |.....  ..++..++.....+.+...   ++...+
T Consensus       161 ~~------~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (342)
T 2hrz_A          161 PL------TSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHW  234 (342)
T ss_dssp             CS------SHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEE
T ss_pred             Cc------chHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCcccee
Confidence            43      68999999999999999888899999999999998 543221  2345566677777765433   235677


Q ss_pred             cccHHHHHHHHHhhhcCCC----CCceEEecCccccHHHHHHHHHHhCC
Q 023689          228 AVPVKDVAKAQVLLFESPA----ASGRYLCTNGIYQFGDFAERVSKLFP  272 (278)
Q Consensus       228 ~i~~~D~a~~~~~~~~~~~----~~~~~~~~~~~~s~~e~~~~i~~~~~  272 (278)
                      ++|++|+|++++.+++++.    ..++|+++++.+|+.|+++.+.+.++
T Consensus       235 ~~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~g~~~s~~e~~~~i~~~~g  283 (342)
T 2hrz_A          235 HASPRSAVGFLIHGAMIDVEKVGPRRNLSMPGLSATVGEQIEALRKVAG  283 (342)
T ss_dssp             EECHHHHHHHHHHHHHSCHHHHCSCCEEECCCEEEEHHHHHHHHHHHHC
T ss_pred             eEehHHHHHHHHHHHhccccccCCccEEEcCCCCCCHHHHHHHHHHHcC
Confidence            8999999999999998764    24578878788999999999998875

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=1e-36  Score=254.34  Aligned_cols=242  Identities=18%  Similarity=0.176  Sum_probs=183.9

Q ss_pred             eEEEeCcchhhHHHHHHHHHHCC-CCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcC-----ccEE
Q 023689           11 TVCVTGANGFIGTWLVKTLLDNN-YTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG-----CKGV   84 (278)
Q Consensus        11 ~vlItGatG~iG~~l~~~L~~~g-~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~-----~d~v   84 (278)
                      +|||||||||||++|+++|+++| + +|++++|+..... ...+.     ++. +.+|++|.+.+.+++++     +|+|
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~-~V~~~~r~~~~~~-~~~~~-----~~~-~~~d~~~~~~~~~~~~~~~~~~~d~v   72 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGIT-DILVVDNLKDGTK-FVNLV-----DLN-IADYMDKEDFLIQIMAGEEFGDVEAI   72 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCC-CEEEEECCSSGGG-GHHHH-----TSC-CSEEEEHHHHHHHHHTTCCCSSCCEE
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCc-EEEEEccCCCCch-hhhcC-----cce-eccccccHHHHHHHHhccccCCCcEE
Confidence            58999999999999999999999 7 8999988764321 11111     223 67999999999999875     9999


Q ss_pred             EEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchh
Q 023689           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWY  164 (278)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y  164 (278)
                      ||+|+....  +..++...+++|+.++.+++++|++.++ +||++||.+++ +...  ..+++|+++..|      .+.|
T Consensus        73 i~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~-g~~~--~~~~~E~~~~~p------~~~Y  140 (310)
T 1eq2_A           73 FHEGACSST--TEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATY-GGRT--SDFIESREYEKP------LNVY  140 (310)
T ss_dssp             EECCSCCCT--TCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGG-TTCC--SCBCSSGGGCCC------SSHH
T ss_pred             EECcccccC--cccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeHHHh-CCCC--CCCCCCCCCCCC------CChh
Confidence            999987554  3456788999999999999999999998 99999997654 3322  246777765444      3689


Q ss_pred             hhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCC---CchhHHHHHHHhhCCCCcc---ccc-ccCcccHHHHHHH
Q 023689          165 PVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY---LNASCAVLQQLLQGSKDTQ---EYH-WLGAVPVKDVAKA  237 (278)
Q Consensus       165 ~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~---~~~~~~~~~~~~~~~~~~~---~~~-~~~~i~~~D~a~~  237 (278)
                      +.+|..+|.+++.+++++|++++++||+.+||+.....   ...+..++.....+.+...   +.+ .++++|++|+|++
T Consensus       141 ~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~  220 (310)
T 1eq2_A          141 GYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADV  220 (310)
T ss_dssp             HHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHH
Confidence            99999999999999888899999999999999986421   2355667777777766543   336 8899999999999


Q ss_pred             HHhhhcCCCCCceEEe-cCccccHHHHHHHHHHhCCC
Q 023689          238 QVLLFESPAASGRYLC-TNGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       238 ~~~~~~~~~~~~~~~~-~~~~~s~~e~~~~i~~~~~~  273 (278)
                      ++.+++++. +++|++ +++.+|+.|+++.+.+.++.
T Consensus       221 ~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~  256 (310)
T 1eq2_A          221 NLWFLENGV-SGIFNLGTGRAESFQAVADATLAYHKK  256 (310)
T ss_dssp             HHHHHHHCC-CEEEEESCSCCBCHHHHHHHC------
T ss_pred             HHHHHhcCC-CCeEEEeCCCccCHHHHHHHHHHHcCC
Confidence            999998766 667866 46789999999999998854

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=100.00  E-value=3.8e-36  Score=258.07  Aligned_cols=252  Identities=15%  Similarity=0.121  Sum_probs=193.9

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCC--cccccCCCC---CCC-ceEEEEccCCChhhHHHHhcC--c
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS--SHLFALPGA---GDA-NLRVFEADVLDSGAVSRAVEG--C   81 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~--~~~~~~~~~---~~~-~v~~~~~Dl~d~~~~~~~~~~--~   81 (278)
                      |+|||||||||||++|+++|++.|+ .|++++|+....  ..+..+...   ... +++++.+|++|++++.+++++  +
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~  107 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGY-EVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKP  107 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcCC
Confidence            7999999999999999999999999 899999876541  112221110   011 688999999999999999985  6


Q ss_pred             cEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCC-----EEEEecceeeeecCCCCCCccccCCCCCchhh
Q 023689           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-----RVVVTSSISAIVPNPGWKGKVFDETSWTDLEY  156 (278)
Q Consensus        82 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~-----~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~  156 (278)
                      |+|||+|+........+++...+++|+.++.+++++|++.+++     +||++||.+++ +...   .+++|+++..+  
T Consensus       108 d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vy-g~~~---~~~~E~~~~~~--  181 (381)
T 1n7h_A          108 DEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMF-GSTP---PPQSETTPFHP--  181 (381)
T ss_dssp             SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGG-TTSC---SSBCTTSCCCC--
T ss_pred             CEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHh-CCCC---CCCCCCCCCCC--
Confidence            9999999875432223456788999999999999999887655     99999996654 3322   26788876544  


Q ss_pred             hhccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCC--chhHHHHHHHhhCCCCc--c--cccccCccc
Q 023689          157 CKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL--NASCAVLQQLLQGSKDT--Q--EYHWLGAVP  230 (278)
Q Consensus       157 ~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~--~--~~~~~~~i~  230 (278)
                          .+.|+.+|.++|.+++.++.+++++++++|++++|||......  ..+..++.....+.+..  .  +++.++++|
T Consensus       182 ----~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~  257 (381)
T 1n7h_A          182 ----RSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGF  257 (381)
T ss_dssp             ----CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEE
T ss_pred             ----CCchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEE
Confidence                3689999999999999999888999999999999999864431  12344455555665432  2  347889999


Q ss_pred             HHHHHHHHHhhhcCCCCCceEEe-cCccccHHHHHHHHHHhCCC
Q 023689          231 VKDVAKAQVLLFESPAASGRYLC-TNGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       231 ~~D~a~~~~~~~~~~~~~~~~~~-~~~~~s~~e~~~~i~~~~~~  273 (278)
                      ++|+|++++.+++++. .++|++ +++.+|++|+++.+.+.++.
T Consensus       258 v~Dva~a~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~  300 (381)
T 1n7h_A          258 AGDYVEAMWLMLQQEK-PDDYVVATEEGHTVEEFLDVSFGYLGL  300 (381)
T ss_dssp             HHHHHHHHHHHHTSSS-CCEEEECCSCEEEHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHhCCC-CCeEEeeCCCCCcHHHHHHHHHHHcCC
Confidence            9999999999998765 367755 56789999999999999864

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=100.00  E-value=5.5e-36  Score=263.81  Aligned_cols=256  Identities=20%  Similarity=0.167  Sum_probs=192.2

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHC---CCCeEEEEecCCCCCcccccC---CCC------------CCCceEEEEccC
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDN---NYTSINATVFPGSDSSHLFAL---PGA------------GDANLRVFEADV   68 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~---g~~~v~~~~r~~~~~~~~~~~---~~~------------~~~~v~~~~~Dl   68 (278)
                      .+||+|||||||||||++|+++|++.   |+ +|++++|+.........+   ...            ...+++++.+|+
T Consensus        71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~-~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl  149 (478)
T 4dqv_A           71 PELRTVLLTGATGFLGRYLVLELLRRLDVDG-RLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDK  149 (478)
T ss_dssp             SCCCEEEEECTTSHHHHHHHHHHHHHSCTTC-EEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhcCCCCC-EEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeEC
Confidence            46899999999999999999999998   88 999999977543211110   000            012899999999


Q ss_pred             C------ChhhHHHHhcCccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCC
Q 023689           69 L------DSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWK  142 (278)
Q Consensus        69 ~------d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~  142 (278)
                      +      |.+.+.++++++|+|||+|+....    .++...+++|+.++.+++++|++.++++||++||.++ |+...  
T Consensus       150 ~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~----~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v-~~~~~--  222 (478)
T 4dqv_A          150 SEPDLGLDQPMWRRLAETVDLIVDSAAMVNA----FPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADV-GAAIE--  222 (478)
T ss_dssp             TSGGGGCCHHHHHHHHHHCCEEEECCSSCSB----SSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGG-GTTSC--
T ss_pred             CCcccCCCHHHHHHHHcCCCEEEECccccCC----cCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhh-cCccC--
Confidence            8      667899999999999999998664    4567899999999999999999999999999999654 44332  


Q ss_pred             CccccCCCCCchhhh-----hccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCC----CCchhHHHHHHH
Q 023689          143 GKVFDETSWTDLEYC-----KSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQP----YLNASCAVLQQL  213 (278)
Q Consensus       143 ~~~~~E~~~~~~~~~-----~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~----~~~~~~~~~~~~  213 (278)
                      ..+++|+++..+...     ....+.|+.+|.++|.+++.++++.|++++++||+.|||+....    ....+..++...
T Consensus       223 ~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~~~  302 (478)
T 4dqv_A          223 PSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSL  302 (478)
T ss_dssp             TTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHHHH
T ss_pred             CCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHHHHHH
Confidence            256778776544311     01124599999999999999998889999999999999985422    123444444443


Q ss_pred             hh-CCC-Ccc---------cccccCcccHHHHHHHHHhhhcC----CCC-CceEEec-Ccc--ccHHHHHHHHHHh
Q 023689          214 LQ-GSK-DTQ---------EYHWLGAVPVKDVAKAQVLLFES----PAA-SGRYLCT-NGI--YQFGDFAERVSKL  270 (278)
Q Consensus       214 ~~-~~~-~~~---------~~~~~~~i~~~D~a~~~~~~~~~----~~~-~~~~~~~-~~~--~s~~e~~~~i~~~  270 (278)
                      .. |.. ..+         +...++++|++|+|++++.++.+    +.. +++|+++ ++.  ++++|+++.+.+.
T Consensus       303 ~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~~~~s~~el~~~l~~~  378 (478)
T 4dqv_A          303 MATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDDGIGLDEYVDWLIEA  378 (478)
T ss_dssp             HHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCCSSCSHHHHHHHHHHT
T ss_pred             HHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCCCCcCHHHHHHHHHHc
Confidence            33 321 111         14678999999999999999875    333 3478665 555  9999999999985

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=100.00  E-value=2.9e-36  Score=252.34  Aligned_cols=235  Identities=19%  Similarity=0.171  Sum_probs=160.3

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcC--ccEEEE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG--CKGVFH   86 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~--~d~vi~   86 (278)
                      +|+|||||||||||++|+++|+++|+ +|++++|+...           . +  ++.+|++|++++.+++++  +|+|||
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~-----------~-~--~~~~Dl~d~~~~~~~~~~~~~d~vih   66 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNW-HAVGCGFRRAR-----------P-K--FEQVNLLDSNAVHHIIHDFQPHVIVH   66 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEC--------------------------------CHHHHHHHCCSEEEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCC-eEEEEccCCCC-----------C-C--eEEecCCCHHHHHHHHHhhCCCEEEE
Confidence            47999999999999999999999998 89999886532           0 3  677999999999999885  899999


Q ss_pred             ecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhh
Q 023689           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPV  166 (278)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~  166 (278)
                      +|+......+..++...+++|+.++.+++++|++.++ +||++||.+++.+ .   ..+++|+++..+      .+.|+.
T Consensus        67 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~~~-~---~~~~~E~~~~~~------~~~Y~~  135 (315)
T 2ydy_A           67 CAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISSDYVFDG-T---NPPYREEDIPAP------LNLYGK  135 (315)
T ss_dssp             CC-------------------CHHHHHHHHHHHHHTC-EEEEEEEGGGSCS-S---SCSBCTTSCCCC------CSHHHH
T ss_pred             CCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchHHHcCC-C---CCCCCCCCCCCC------cCHHHH
Confidence            9997655444567788999999999999999999886 9999999776544 2   366888876554      368999


Q ss_pred             HHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHh-hCCCCcc-cccccCcccHHHHHHHHHhhhcC
Q 023689          167 SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLL-QGSKDTQ-EYHWLGAVPVKDVAKAQVLLFES  244 (278)
Q Consensus       167 sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~i~~~D~a~~~~~~~~~  244 (278)
                      +|..+|.+++.+    +++++++||+.+||+...........++.... .+.+... +++.++++|++|+|++++.++++
T Consensus       136 sK~~~e~~~~~~----~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~  211 (315)
T 2ydy_A          136 TKLDGEKAVLEN----NLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEK  211 (315)
T ss_dssp             HHHHHHHHHHHH----CTTCEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEECSSBBCCEEHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHh----CCCeEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeeccCceECcEEHHHHHHHHHHHHHh
Confidence            999999998754    67899999999999976522122333445555 5554433 45788999999999999999876


Q ss_pred             C----CCCceEEe-cCccccHHHHHHHHHHhCCC
Q 023689          245 P----AASGRYLC-TNGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       245 ~----~~~~~~~~-~~~~~s~~e~~~~i~~~~~~  273 (278)
                      .    ..+++|++ +++.+++.|+++.+.+.++.
T Consensus       212 ~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~  245 (315)
T 2ydy_A          212 RMLDPSIKGTFHWSGNEQMTKYEMACAIADAFNL  245 (315)
T ss_dssp             HHTCTTCCEEEECCCSCCBCHHHHHHHHHHHTTC
T ss_pred             hccccCCCCeEEEcCCCcccHHHHHHHHHHHhCC
Confidence            3    34457765 46789999999999999864

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=100.00  E-value=6.7e-36  Score=273.01  Aligned_cols=256  Identities=18%  Similarity=0.277  Sum_probs=199.2

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHC-CCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhh-HHHHhcCccEE
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGA-VSRAVEGCKGV   84 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~-g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~-~~~~~~~~d~v   84 (278)
                      .+||+|||||||||||++|+++|++. |+ +|++++|+......+..     ..+++++.+|++|.++ +.++++++|+|
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~-~V~~~~r~~~~~~~~~~-----~~~v~~v~~Dl~d~~~~~~~~~~~~D~V  386 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHY-EVYGLDIGSDAISRFLN-----HPHFHFVEGDISIHSEWIEYHVKKCDVV  386 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSE-EEEEEESCCTTTGGGTT-----CTTEEEEECCTTTCHHHHHHHHHHCSEE
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCC-EEEEEEcCchhhhhhcc-----CCceEEEECCCCCcHHHHHHhhcCCCEE
Confidence            45789999999999999999999998 88 89999997655433211     1278999999999865 77888999999


Q ss_pred             EEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhh-hhccCch
Q 023689           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEY-CKSRKKW  163 (278)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~-~~~~~~~  163 (278)
                      ||+|+......+..++...+++|+.++.+++++|++.+ ++||++||.+++....   ..+++|+++..... ...+.+.
T Consensus       387 ih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~r~V~~SS~~vyg~~~---~~~~~E~~~~~~~~p~~~p~~~  462 (660)
T 1z7e_A          387 LPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCS---DKYFDEDHSNLIVGPVNKPRWI  462 (660)
T ss_dssp             EECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCC---SSSBCTTTCCEEECCTTCTTHH
T ss_pred             EECceecCccccccCHHHHHHhhhHHHHHHHHHHHHhC-CEEEEEecHHHcCCCC---CcccCCCccccccCcccCCCCC
Confidence            99998755322234567889999999999999999988 8999999976654322   25678877532110 1123357


Q ss_pred             hhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCC-------CCchhHHHHHHHhhCCCCcc---cccccCcccHHH
Q 023689          164 YPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQP-------YLNASCAVLQQLLQGSKDTQ---EYHWLGAVPVKD  233 (278)
Q Consensus       164 y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~-------~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~D  233 (278)
                      |+.+|.++|.+++.+++++|++++++||+.+||+....       ....+..++.+...+.+...   +++.++++|++|
T Consensus       463 Y~~sK~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~D  542 (660)
T 1z7e_A          463 YSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRD  542 (660)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHHH
T ss_pred             cHHHHHHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHHH
Confidence            99999999999999988889999999999999998643       12345667777777877543   347899999999


Q ss_pred             HHHHHHhhhcCCC---CCceEEecC-c-cccHHHHHHHHHHhCC
Q 023689          234 VAKAQVLLFESPA---ASGRYLCTN-G-IYQFGDFAERVSKLFP  272 (278)
Q Consensus       234 ~a~~~~~~~~~~~---~~~~~~~~~-~-~~s~~e~~~~i~~~~~  272 (278)
                      +|++++.+++++.   .++.|++++ + .+|+.|+++.+.+.++
T Consensus       543 va~ai~~~l~~~~~~~~g~~~ni~~~~~~~s~~el~~~i~~~~g  586 (660)
T 1z7e_A          543 GIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFE  586 (660)
T ss_dssp             HHHHHHHHHHCGGGTTTTEEEEECCGGGEEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCccccCCCeEEEECCCCCCcCHHHHHHHHHHHhc
Confidence            9999999998764   234677665 4 7999999999988764

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=100.00  E-value=2.4e-35  Score=249.09  Aligned_cols=254  Identities=19%  Similarity=0.157  Sum_probs=185.0

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCC-cccccCCCCCCCceEEEEccCCChhhHHHHhc--CccEEEE
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-SHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFH   86 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~-~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vi~   86 (278)
                      |+|||||||||||++++++|+++|+ +|++++|..... .....+......++.++.+|++|++++.++++  ++|+|||
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih   79 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQNGH-DVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIH   79 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC-EEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEEE
Confidence            4899999999999999999999999 888887643221 11111100001167899999999999999887  4999999


Q ss_pred             ecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhh
Q 023689           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPV  166 (278)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~  166 (278)
                      +||........+++...+++|+.++.+++++|++.++++||++||.+++ +...  ..+++|+++..+     ..+.|+.
T Consensus        80 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~-g~~~--~~~~~e~~~~~~-----~~~~Y~~  151 (338)
T 1udb_A           80 FAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVY-GDNP--KIPYVESFPTGT-----PQSPYGK  151 (338)
T ss_dssp             CCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGG-CSCC--SSSBCTTSCCCC-----CSSHHHH
T ss_pred             CCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHh-CCCC--CCCcCcccCCCC-----CCChHHH
Confidence            9986442112234567899999999999999999898999999996554 3332  356777765432     1368999


Q ss_pred             HHHHHHHHHHHHHHhc-CCceEEEecceeeCCCCC------C---CCchhHHHHHHHh-hCCCCc---------cccccc
Q 023689          167 SKTLAEKAAWEFAEKH-GVDVVAIHPATCLGPLMQ------P---YLNASCAVLQQLL-QGSKDT---------QEYHWL  226 (278)
Q Consensus       167 sK~~~e~~~~~~~~~~-~~~~~~lrp~~i~g~~~~------~---~~~~~~~~~~~~~-~~~~~~---------~~~~~~  226 (278)
                      +|.++|.+++.++++. +++++++||+++||+...      .   .......++.... .+.+..         .+.+.+
T Consensus       152 sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~  231 (338)
T 1udb_A          152 SKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVR  231 (338)
T ss_dssp             HHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEE
T ss_pred             HHHHHHHHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceee
Confidence            9999999999998776 899999999999998431      1   1122333333322 222211         134678


Q ss_pred             CcccHHHHHHHHHhhhcCC--CCC-ceEEec-CccccHHHHHHHHHHhCC
Q 023689          227 GAVPVKDVAKAQVLLFESP--AAS-GRYLCT-NGIYQFGDFAERVSKLFP  272 (278)
Q Consensus       227 ~~i~~~D~a~~~~~~~~~~--~~~-~~~~~~-~~~~s~~e~~~~i~~~~~  272 (278)
                      +++|++|+|++++.++++.  ..+ ++|+++ ++++|+.|+++.+.+.++
T Consensus       232 ~~i~v~Dva~a~~~~l~~~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g  281 (338)
T 1udb_A          232 DYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACG  281 (338)
T ss_dssp             CEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSCCEEHHHHHHHHHHHHT
T ss_pred             eeEEHHHHHHHHHHHHhhhhccCCCcEEEecCCCceeHHHHHHHHHHHhC
Confidence            9999999999999998753  233 467664 678999999999999874

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=100.00  E-value=2.4e-35  Score=256.73  Aligned_cols=255  Identities=19%  Similarity=0.173  Sum_probs=192.2

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCC------------CCCCCceEEEEccCCCh
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP------------GAGDANLRVFEADVLDS   71 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~------------~~~~~~v~~~~~Dl~d~   71 (278)
                      |....||+|||||||||||++|+++|++.|+ +|++++|+.........+.            .....++.++.+|++|+
T Consensus        64 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~  142 (427)
T 4f6c_A           64 LSHRPLGNTLLTGATGFLGAYLIEALQGYSH-RIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECM  142 (427)
T ss_dssp             SCCCCCEEEEEECTTSHHHHHHHHHHTTTEE-EEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---
T ss_pred             CCCCCCCEEEEecCCcHHHHHHHHHHHcCCC-EEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCc
Confidence            4455678999999999999999999999999 9999999876221111000            00011899999999998


Q ss_pred             hhHHHHhcCccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecC--CCCCCccccCC
Q 023689           72 GAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPN--PGWKGKVFDET  149 (278)
Q Consensus        72 ~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~--~~~~~~~~~E~  149 (278)
                      +.+. .+.++|+|||+|+....   ..++...+++|+.++.+++++|++ ++++||++||.++ ...  ......+++|+
T Consensus       143 ~~l~-~~~~~d~Vih~A~~~~~---~~~~~~~~~~Nv~g~~~l~~aa~~-~~~~~v~~SS~~~-G~~~~~~~~~~~~~E~  216 (427)
T 4f6c_A          143 DDVV-LPENMDTIIHAGARTDH---FGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISV-GTYFDIDTEDVTFSEA  216 (427)
T ss_dssp             CCCC-CSSCCSEEEECCCCC----------CHHHHHHHHHHHHHHHHHH-TTCEEEEEEEGGG-GSEECSSCSCCEECTT
T ss_pred             ccCC-CcCCCCEEEECCcccCC---CCCHHHHHHHHHHHHHHHHHHHHh-cCCcEEEECchHh-CCCccCCCCCcccccc
Confidence            8888 77899999999997653   356788999999999999999998 7799999999776 211  11134678888


Q ss_pred             CCCchhhhhccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCC------chhHHHHHHHhhCCCCcc--
Q 023689          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL------NASCAVLQQLLQGSKDTQ--  221 (278)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~------~~~~~~~~~~~~~~~~~~--  221 (278)
                      ++..+.   .+.+.|+.+|+++|.+++.++ +.|++++++||+.|||+......      ..+..++.....+.+...  
T Consensus       217 ~~~~~~---~~~~~Y~~sK~~~E~~~~~~~-~~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (427)
T 4f6c_A          217 DVYKGQ---LLTSPYTRSKFYSELKVLEAV-NNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSM  292 (427)
T ss_dssp             CSCSSC---CCCSHHHHHHHHHHHHHHHHH-HTTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEHHH
T ss_pred             ccccCC---CCCCchHHHHHHHHHHHHHHH-HcCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCCcc
Confidence            864321   244789999999999999876 47999999999999999865531      235566777777666554  


Q ss_pred             cccccCcccHHHHHHHHHhhhcCCCCCceEEe-cCccccHHHHHHHHHH
Q 023689          222 EYHWLGAVPVKDVAKAQVLLFESPAASGRYLC-TNGIYQFGDFAERVSK  269 (278)
Q Consensus       222 ~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~-~~~~~s~~e~~~~i~~  269 (278)
                      ++..+++++++|+|++++.++.++..+++|++ +++.+++.|+++.+.+
T Consensus       293 ~~~~~~~v~v~DvA~ai~~~~~~~~~g~~~~l~~~~~~s~~el~~~i~~  341 (427)
T 4f6c_A          293 AEMPVDFSFVDTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKR  341 (427)
T ss_dssp             HTCEECCEEHHHHHHHHHHHTTSCCCCSEEEESCSCCEEHHHHHHHHHS
T ss_pred             ccceEEEeeHHHHHHHHHHHHcCCCCCCEEEecCCCCCcHHHHHHHHHH
Confidence            46889999999999999999988775557855 5678999999999987

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=100.00  E-value=2.9e-36  Score=250.53  Aligned_cols=227  Identities=15%  Similarity=0.085  Sum_probs=183.4

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcC--ccEEEEe
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG--CKGVFHV   87 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~--~d~vi~~   87 (278)
                      |+|||||||||||++|+++|+ +|+ +|++++|+..                 ++.+|++|++++.+++++  +|+|||+
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~-~V~~~~r~~~-----------------~~~~D~~d~~~~~~~~~~~~~d~vih~   61 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PVG-NLIALDVHSK-----------------EFCGDFSNPKGVAETVRKLRPDVIVNA   61 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TTS-EEEEECTTCS-----------------SSCCCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cCC-eEEEeccccc-----------------cccccCCCHHHHHHHHHhcCCCEEEEC
Confidence            489999999999999999999 898 9999988652                 234899999999999986  9999999


Q ss_pred             cccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhhH
Q 023689           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVS  167 (278)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~s  167 (278)
                      |+.........++...+++|+.++.+++++|++.++ +||++||.+++....   ..+++|+++..|.      +.|+.+
T Consensus        62 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~vy~~~~---~~~~~E~~~~~p~------~~Y~~s  131 (299)
T 1n2s_A           62 AAHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTG---DIPWQETDATSPL------NVYGKT  131 (299)
T ss_dssp             CCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCT---TCCBCTTSCCCCS------SHHHHH
T ss_pred             cccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEecccEEeCCC---CCCCCCCCCCCCc------cHHHHH
Confidence            987553223456788999999999999999999887 899999976654332   2578888765553      689999


Q ss_pred             HHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCc-ccccccCcccHHHHHHHHHhhhcCC-
Q 023689          168 KTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT-QEYHWLGAVPVKDVAKAQVLLFESP-  245 (278)
Q Consensus       168 K~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~D~a~~~~~~~~~~-  245 (278)
                      |.++|++++.+    ..+++++||+.+||+...   .....++.....+.+.. .+++.++++|++|+|++++.+++++ 
T Consensus       132 K~~~E~~~~~~----~~~~~ilRp~~v~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~  204 (299)
T 1n2s_A          132 KLAGEKALQDN----CPKHLIFRTSWVYAGKGN---NFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVAL  204 (299)
T ss_dssp             HHHHHHHHHHH----CSSEEEEEECSEECSSSC---CHHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHh----CCCeEEEeeeeecCCCcC---cHHHHHHHHHhcCCCEEeecCcccCCeeHHHHHHHHHHHHHHhc
Confidence            99999999755    348999999999999754   24556666666676543 3567899999999999999999875 


Q ss_pred             -CC--CceEEec-CccccHHHHHHHHHHhCC
Q 023689          246 -AA--SGRYLCT-NGIYQFGDFAERVSKLFP  272 (278)
Q Consensus       246 -~~--~~~~~~~-~~~~s~~e~~~~i~~~~~  272 (278)
                       ..  +++|+++ ++.+|++|+++.+.+.++
T Consensus       205 ~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g  235 (299)
T 1n2s_A          205 NKPEVAGLYHLVAGGTTTWHDYAALVFDEAR  235 (299)
T ss_dssp             HCGGGCEEEECCCBSCEEHHHHHHHHHHHHH
T ss_pred             cccccCceEEEeCCCCCCHHHHHHHHHHHhC
Confidence             22  5678665 578999999999998764

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=100.00  E-value=6e-36  Score=240.38  Aligned_cols=219  Identities=19%  Similarity=0.239  Sum_probs=170.8

Q ss_pred             cccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCce-EEEEccCCChhhHHHHhcCc
Q 023689            3 SEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANL-RVFEADVLDSGAVSRAVEGC   81 (278)
Q Consensus         3 ~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v-~~~~~Dl~d~~~~~~~~~~~   81 (278)
                      .++.+++|+|||||||||||++++++|+++|+ +|++++|+++....+...      ++ +++.+|++  +++.++++++
T Consensus        15 ~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~-~V~~~~R~~~~~~~~~~~------~~~~~~~~Dl~--~~~~~~~~~~   85 (236)
T 3e8x_A           15 ENLYFQGMRVLVVGANGKVARYLLSELKNKGH-EPVAMVRNEEQGPELRER------GASDIVVANLE--EDFSHAFASI   85 (236)
T ss_dssp             ------CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHT------TCSEEEECCTT--SCCGGGGTTC
T ss_pred             cccCcCCCeEEEECCCChHHHHHHHHHHhCCC-eEEEEECChHHHHHHHhC------CCceEEEcccH--HHHHHHHcCC
Confidence            34567789999999999999999999999999 999999987665444332      78 99999999  7788899999


Q ss_pred             cEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccC
Q 023689           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRK  161 (278)
Q Consensus        82 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  161 (278)
                      |+|||+||....    .++...+++|+.++.+++++|++.++++||++||..+..+          |..+       .+.
T Consensus        86 D~vi~~ag~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~----------~~~~-------~~~  144 (236)
T 3e8x_A           86 DAVVFAAGSGPH----TGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDP----------DQGP-------MNM  144 (236)
T ss_dssp             SEEEECCCCCTT----SCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCG----------GGSC-------GGG
T ss_pred             CEEEECCCCCCC----CCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCC----------CCCh-------hhh
Confidence            999999997542    5688999999999999999999999999999998433211          1111       112


Q ss_pred             chhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHHHHHHHHHhh
Q 023689          162 KWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLL  241 (278)
Q Consensus       162 ~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  241 (278)
                      ..|+.+|.++|.+++    +++++++++||+.++|+.........             ......+++++++|+|++++.+
T Consensus       145 ~~Y~~sK~~~e~~~~----~~gi~~~~lrpg~v~~~~~~~~~~~~-------------~~~~~~~~~i~~~Dva~~~~~~  207 (236)
T 3e8x_A          145 RHYLVAKRLADDELK----RSSLDYTIVRPGPLSNEESTGKVTVS-------------PHFSEITRSITRHDVAKVIAEL  207 (236)
T ss_dssp             HHHHHHHHHHHHHHH----HSSSEEEEEEECSEECSCCCSEEEEE-------------SSCSCCCCCEEHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHH----HCCCCEEEEeCCcccCCCCCCeEEec-------------cCCCcccCcEeHHHHHHHHHHH
Confidence            579999999999876    78999999999999999754321100             0122468999999999999999


Q ss_pred             hcCCCCCc-eEEecCccccHHHHHHHHH
Q 023689          242 FESPAASG-RYLCTNGIYQFGDFAERVS  268 (278)
Q Consensus       242 ~~~~~~~~-~~~~~~~~~s~~e~~~~i~  268 (278)
                      ++++...| .|+++++..+++|+++.+.
T Consensus       208 ~~~~~~~g~~~~v~~~~~~~~e~~~~i~  235 (236)
T 3e8x_A          208 VDQQHTIGKTFEVLNGDTPIAKVVEQLG  235 (236)
T ss_dssp             TTCGGGTTEEEEEEECSEEHHHHHHTC-
T ss_pred             hcCccccCCeEEEeCCCcCHHHHHHHhc
Confidence            99875545 6777666799999998765

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-35  Score=245.94  Aligned_cols=224  Identities=18%  Similarity=0.149  Sum_probs=181.5

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc--CccEEEE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFH   86 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vi~   86 (278)
                      -|+|||||||||||++|+++|+++|+ +|++++|+.                     +|++|++++.++++  ++|+|||
T Consensus        12 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~---------------------~Dl~d~~~~~~~~~~~~~d~vih   69 (292)
T 1vl0_A           12 HMKILITGANGQLGREIQKQLKGKNV-EVIPTDVQD---------------------LDITNVLAVNKFFNEKKPNVVIN   69 (292)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHTTSSE-EEEEECTTT---------------------CCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             cceEEEECCCChHHHHHHHHHHhCCC-eEEeccCcc---------------------CCCCCHHHHHHHHHhcCCCEEEE
Confidence            47999999999999999999999998 899998851                     89999999999998  7999999


Q ss_pred             ecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhh
Q 023689           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPV  166 (278)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~  166 (278)
                      +|+.........++...+++|+.++.+++++|++.++ +||++||.+++....   ..+++|+++..+.      +.|+.
T Consensus        70 ~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS~~v~~~~~---~~~~~E~~~~~~~------~~Y~~  139 (292)
T 1vl0_A           70 CAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEA---KEPITEFDEVNPQ------SAYGK  139 (292)
T ss_dssp             CCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSCC---SSCBCTTSCCCCC------SHHHH
T ss_pred             CCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEechHHeECCCC---CCCCCCCCCCCCc------cHHHH
Confidence            9987543222345678999999999999999999887 999999976654332   2578888765543      68999


Q ss_pred             HHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCc-ccccccCcccHHHHHHHHHhhhcCC
Q 023689          167 SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT-QEYHWLGAVPVKDVAKAQVLLFESP  245 (278)
Q Consensus       167 sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~D~a~~~~~~~~~~  245 (278)
                      +|..+|.+++.+    +.+++++||+.+||+ ..   .....++.....+.+.. .+++.++++|++|+|++++.+++++
T Consensus       140 sK~~~E~~~~~~----~~~~~~lR~~~v~G~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~  211 (292)
T 1vl0_A          140 TKLEGENFVKAL----NPKYYIVRTAWLYGD-GN---NFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEK  211 (292)
T ss_dssp             HHHHHHHHHHHH----CSSEEEEEECSEESS-SS---CHHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhh----CCCeEEEeeeeeeCC-Cc---ChHHHHHHHHhcCCcEEeecCeeeCCccHHHHHHHHHHHHhcC
Confidence            999999999754    457999999999999 32   24455566666665543 3557899999999999999999876


Q ss_pred             CCCceEEec-CccccHHHHHHHHHHhCCC
Q 023689          246 AASGRYLCT-NGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       246 ~~~~~~~~~-~~~~s~~e~~~~i~~~~~~  273 (278)
                       .+++|+++ ++.+|+.|+++.+.+.++.
T Consensus       212 -~~~~~~i~~~~~~s~~e~~~~i~~~~g~  239 (292)
T 1vl0_A          212 -NYGTFHCTCKGICSWYDFAVEIFRLTGI  239 (292)
T ss_dssp             -CCEEEECCCBSCEEHHHHHHHHHHHHCC
T ss_pred             -CCcEEEecCCCCccHHHHHHHHHHHhCC
Confidence             55678655 5789999999999998753

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=100.00  E-value=4.5e-35  Score=239.49  Aligned_cols=212  Identities=21%  Similarity=0.258  Sum_probs=177.0

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEec
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a   88 (278)
                      ||+|||||||||||++++++|+++|+ .|++++|++....         ..+++++.+|++|++++.++++++|+|||+|
T Consensus         3 ~k~vlVTGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~A   72 (267)
T 3rft_A            3 MKRLLVTGAAGQLGRVMRERLAPMAE-ILRLADLSPLDPA---------GPNEECVQCDLADANAVNAMVAGCDGIVHLG   72 (267)
T ss_dssp             EEEEEEESTTSHHHHHHHHHTGGGEE-EEEEEESSCCCCC---------CTTEEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCC-EEEEEecCCcccc---------CCCCEEEEcCCCCHHHHHHHHcCCCEEEECC
Confidence            68999999999999999999999999 8999999875433         1189999999999999999999999999999


Q ss_pred             ccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhhHH
Q 023689           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK  168 (278)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK  168 (278)
                      |...    .++++..+++|+.|+.++++++++++.++||++||..++...+.  ..+++|+.+..+.      +.|+.||
T Consensus        73 g~~~----~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~--~~~~~e~~~~~~~------~~Y~~sK  140 (267)
T 3rft_A           73 GISV----EKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQ--TERLGPDVPARPD------GLYGVSK  140 (267)
T ss_dssp             SCCS----CCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBT--TSCBCTTSCCCCC------SHHHHHH
T ss_pred             CCcC----cCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCC--CCCCCCCCCCCCC------ChHHHHH
Confidence            9843    46788999999999999999999999999999999877644333  3567787765543      6899999


Q ss_pred             HHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHHHHHHHHHhhhcCCCCC
Q 023689          169 TLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAAS  248 (278)
Q Consensus       169 ~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~  248 (278)
                      ...|.+++.++++++++++++||+.++|+.....                     ..+++++++|+++++..++..+...
T Consensus       141 ~~~e~~~~~~a~~~g~~~~~vr~~~v~~~~~~~~---------------------~~~~~~~~~d~a~~~~~~~~~~~~~  199 (267)
T 3rft_A          141 CFGENLARMYFDKFGQETALVRIGSCTPEPNNYR---------------------MLSTWFSHDDFVSLIEAVFRAPVLG  199 (267)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEECBCSSSCCSTT---------------------HHHHBCCHHHHHHHHHHHHHCSCCC
T ss_pred             HHHHHHHHHHHHHhCCeEEEEEeecccCCCCCCC---------------------ceeeEEcHHHHHHHHHHHHhCCCCC
Confidence            9999999999989999999999999999853321                     2467899999999999999887654


Q ss_pred             c--eEEecCccccHHHH
Q 023689          249 G--RYLCTNGIYQFGDF  263 (278)
Q Consensus       249 ~--~~~~~~~~~s~~e~  263 (278)
                      +  .|+++++..++.++
T Consensus       200 ~~~~~~~s~~~~~~~~~  216 (267)
T 3rft_A          200 CPVVWGASANDAGWWDN  216 (267)
T ss_dssp             SCEEEECCCCTTCCBCC
T ss_pred             ceEEEEeCCCCCCcccC
Confidence            4  35677766555443

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=100.00  E-value=3.2e-35  Score=242.75  Aligned_cols=219  Identities=15%  Similarity=0.103  Sum_probs=174.5

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEec
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a   88 (278)
                      ||+|||||| ||||++|+++|+++|+ +|++++|++.....+...      +++++.+|++|.+     ++++|+|||+|
T Consensus         5 ~~~ilVtGa-G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~------~~~~~~~D~~d~~-----~~~~d~vi~~a   71 (286)
T 3ius_A            5 TGTLLSFGH-GYTARVLSRALAPQGW-RIIGTSRNPDQMEAIRAS------GAEPLLWPGEEPS-----LDGVTHLLIST   71 (286)
T ss_dssp             CCEEEEETC-CHHHHHHHHHHGGGTC-EEEEEESCGGGHHHHHHT------TEEEEESSSSCCC-----CTTCCEEEECC
T ss_pred             cCcEEEECC-cHHHHHHHHHHHHCCC-EEEEEEcChhhhhhHhhC------CCeEEEecccccc-----cCCCCEEEECC
Confidence            589999998 9999999999999999 999999987654443322      8999999999955     78999999999


Q ss_pred             ccCCCCCCCCchhhhhhhHHhHHHHHHHHHHh--cCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhh
Q 023689           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKR--FGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPV  166 (278)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~--~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~  166 (278)
                      +.....   .          ..+.++++++++  .++++||++||.+. |+...  ..+++|+++..+.      +.|+.
T Consensus        72 ~~~~~~---~----------~~~~~l~~a~~~~~~~~~~~v~~Ss~~v-yg~~~--~~~~~E~~~~~p~------~~Y~~  129 (286)
T 3ius_A           72 APDSGG---D----------PVLAALGDQIAARAAQFRWVGYLSTTAV-YGDHD--GAWVDETTPLTPT------AARGR  129 (286)
T ss_dssp             CCBTTB---C----------HHHHHHHHHHHHTGGGCSEEEEEEEGGG-GCCCT--TCEECTTSCCCCC------SHHHH
T ss_pred             Cccccc---c----------HHHHHHHHHHHhhcCCceEEEEeeccee-cCCCC--CCCcCCCCCCCCC------CHHHH
Confidence            864421   1          125789999988  67899999998655 44332  3678898876654      68999


Q ss_pred             HHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcc--cccccCcccHHHHHHHHHhhhcC
Q 023689          167 SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ--EYHWLGAVPVKDVAKAQVLLFES  244 (278)
Q Consensus       167 sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~D~a~~~~~~~~~  244 (278)
                      +|..+|++++.+   .+++++++||+.+||+.....        ..+..+.+...  +++.++++|++|+|++++.++++
T Consensus       130 sK~~~E~~~~~~---~~~~~~ilRp~~v~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~  198 (286)
T 3ius_A          130 WRVMAEQQWQAV---PNLPLHVFRLAGIYGPGRGPF--------SKLGKGGIRRIIKPGQVFSRIHVEDIAQVLAASMAR  198 (286)
T ss_dssp             HHHHHHHHHHHS---TTCCEEEEEECEEEBTTBSSS--------TTSSSSCCCEEECTTCCBCEEEHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHhh---cCCCEEEEeccceECCCchHH--------HHHhcCCccccCCCCcccceEEHHHHHHHHHHHHhC
Confidence            999999999755   599999999999999985442        12344554443  34789999999999999999998


Q ss_pred             CCCCceEEe-cCccccHHHHHHHHHHhCCC
Q 023689          245 PAASGRYLC-TNGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       245 ~~~~~~~~~-~~~~~s~~e~~~~i~~~~~~  273 (278)
                      +..+++|++ +++.+|+.|+++.+.+.++.
T Consensus       199 ~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~  228 (286)
T 3ius_A          199 PDPGAVYNVCDDEPVPPQDVIAYAAELQGL  228 (286)
T ss_dssp             CCTTCEEEECCSCCBCHHHHHHHHHHHHTC
T ss_pred             CCCCCEEEEeCCCCccHHHHHHHHHHHcCC
Confidence            876567865 46789999999999998854

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=100.00  E-value=6.1e-35  Score=231.84  Aligned_cols=208  Identities=19%  Similarity=0.244  Sum_probs=170.2

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCC-hhhHHHHhcCccEEEEec
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD-SGAVSRAVEGCKGVFHVA   88 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d-~~~~~~~~~~~d~vi~~a   88 (278)
                      |+|||||||||||++++++|+++|+ +|++++|+++.....        .+++++++|++| ++++.++++++|+|||+|
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~--------~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~a   71 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTTDY-QIYAGARKVEQVPQY--------NNVKAVHFDVDWTPEEMAKQLHGMDAIINVS   71 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTSSC-EEEEEESSGGGSCCC--------TTEEEEECCTTSCHHHHHTTTTTCSEEEECC
T ss_pred             CeEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCccchhhc--------CCceEEEecccCCHHHHHHHHcCCCEEEECC
Confidence            4899999999999999999999999 999999987654332        189999999999 999999999999999999


Q ss_pred             ccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhhHH
Q 023689           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK  168 (278)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK  168 (278)
                      +...        ...+++|+.++.+++++|++.++++||++||.+++.+      .+..| .+      ..+.+.|+.+|
T Consensus        72 g~~~--------~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~------~~~~e-~~------~~~~~~Y~~sK  130 (219)
T 3dqp_A           72 GSGG--------KSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQP------EKWIG-AG------FDALKDYYIAK  130 (219)
T ss_dssp             CCTT--------SSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCG------GGCCS-HH------HHHTHHHHHHH
T ss_pred             cCCC--------CCcEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCC------Ccccc-cc------cccccHHHHHH
Confidence            8754        2478999999999999999999999999999655432      22333 11      12346899999


Q ss_pred             HHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHHHHHHHHHhhhcCCCCC
Q 023689          169 TLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAAS  248 (278)
Q Consensus       169 ~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~  248 (278)
                      .++|++++   +.++++++++||+.+||+.......                .++..+++++++|+|++++.++.++...
T Consensus       131 ~~~e~~~~---~~~~i~~~ilrp~~v~g~~~~~~~~----------------~~~~~~~~i~~~Dva~~i~~~l~~~~~~  191 (219)
T 3dqp_A          131 HFADLYLT---KETNLDYTIIQPGALTEEEATGLID----------------INDEVSASNTIGDVADTIKELVMTDHSI  191 (219)
T ss_dssp             HHHHHHHH---HSCCCEEEEEEECSEECSCCCSEEE----------------ESSSCCCCEEHHHHHHHHHHHHTCGGGT
T ss_pred             HHHHHHHH---hccCCcEEEEeCceEecCCCCCccc----------------cCCCcCCcccHHHHHHHHHHHHhCcccc
Confidence            99999985   4789999999999999986543311                1246789999999999999999987654


Q ss_pred             c-eEEecCccccHHHHHHH
Q 023689          249 G-RYLCTNGIYQFGDFAER  266 (278)
Q Consensus       249 ~-~~~~~~~~~s~~e~~~~  266 (278)
                      | .|+++++..+++|+++.
T Consensus       192 g~~~~i~~g~~~~~e~~~~  210 (219)
T 3dqp_A          192 GKVISMHNGKTAIKEALES  210 (219)
T ss_dssp             TEEEEEEECSEEHHHHHHT
T ss_pred             CcEEEeCCCCccHHHHHHH
Confidence            5 68777667999987764

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=100.00  E-value=1.4e-34  Score=257.05  Aligned_cols=253  Identities=19%  Similarity=0.170  Sum_probs=191.6

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccC------------CCCCCCceEEEEccCCChhhHH
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL------------PGAGDANLRVFEADVLDSGAVS   75 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~------------~~~~~~~v~~~~~Dl~d~~~~~   75 (278)
                      .+|+|||||||||||++|+++|++.|+ +|++++|+.........+            ......+++++.+|++|++.+.
T Consensus       149 ~~~~VLVTGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~  227 (508)
T 4f6l_B          149 PLGNTLLTGATGFLGAYLIEALQGYSH-RIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV  227 (508)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHTBTTEE-EEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC
T ss_pred             CCCeEEEECCccchHHHHHHHHHhcCC-EEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC
Confidence            468999999999999999999999999 999999987632111000            0000128999999999988777


Q ss_pred             HHhcCccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceee--eecCCCCCCccccCCCCCc
Q 023689           76 RAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISA--IVPNPGWKGKVFDETSWTD  153 (278)
Q Consensus        76 ~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~--~~~~~~~~~~~~~E~~~~~  153 (278)
                       +..++|+|||+|+....   ..++...+++|+.++.+++++|++ +.++|||+||.++  +... .....+++|+++..
T Consensus       228 -~~~~~D~Vih~Aa~~~~---~~~~~~~~~~Nv~gt~~ll~~a~~-~~~~~v~iSS~~vG~~~~~-~~~~~~~~E~~~~~  301 (508)
T 4f6l_B          228 -LPENMDTIIHAGARTDH---FGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISVGTYFDI-DTEDVTFSEADVYK  301 (508)
T ss_dssp             -CSSCCSEEEECCCC-----------CCHHHHHHHHHHHHHHHHT-TTCEEEEEEESCTTSEECT-TCSCCEECTTCSCS
T ss_pred             -CccCCCEEEECCceecC---CCCHHHHhhhHHHHHHHHHHHHHh-CCCcEEEeCChhhccCCcc-CCcCcccccccccc
Confidence             77899999999997653   356788999999999999999998 6789999999776  1111 11346788888643


Q ss_pred             hhhhhccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCC------CchhHHHHHHHhhCCCCcc--cccc
Q 023689          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY------LNASCAVLQQLLQGSKDTQ--EYHW  225 (278)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~------~~~~~~~~~~~~~~~~~~~--~~~~  225 (278)
                      +   ..+.+.|+.+|+.+|.+++.++ +.|++++++||+.|||+.....      ...+..++.....+.....  +++.
T Consensus       302 ~---~~~~~~Y~~sK~~~E~~~~~~~-~~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~  377 (508)
T 4f6l_B          302 G---QLLTSPYTRSKFYSELKVLEAV-NNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMP  377 (508)
T ss_dssp             S---BCCCSHHHHHHHHHHHHHHHHH-HTTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEETTGGGSE
T ss_pred             c---ccCCCcHHHHHHHHHHHHHHHH-HcCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCCCccCce
Confidence            2   1244789999999999999876 4799999999999999986543      1235566777666655444  4688


Q ss_pred             cCcccHHHHHHHHHhhhcCCCCCceEEe-cCccccHHHHHHHHHHhC
Q 023689          226 LGAVPVKDVAKAQVLLFESPAASGRYLC-TNGIYQFGDFAERVSKLF  271 (278)
Q Consensus       226 ~~~i~~~D~a~~~~~~~~~~~~~~~~~~-~~~~~s~~e~~~~i~~~~  271 (278)
                      ++++|++|+|++++.++.++..+++|++ +++.+++.|+++.+.+..
T Consensus       378 ~~~v~v~DvA~ai~~~~~~~~~~~~~nl~~~~~~s~~el~~~i~~~~  424 (508)
T 4f6l_B          378 VDFSFVDTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKRKE  424 (508)
T ss_dssp             EECEEHHHHHHHHHHHTTBCCSCSEEEESCSCEEEHHHHHHHHHSSC
T ss_pred             EEEEcHHHHHHHHHHHHhCCCCCCEEEeCCCCCCCHHHHHHHHHHcC
Confidence            9999999999999999988775557855 567899999999998754

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=100.00  E-value=1.1e-33  Score=234.95  Aligned_cols=229  Identities=17%  Similarity=0.123  Sum_probs=170.2

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEecc
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a~   89 (278)
                      |||||||||||||++|+++|+++|| +|++++|++...            .+.   .|    +...+.++++|+|||+|+
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G~-~V~~l~R~~~~~------------~~~---~~----~~~~~~l~~~d~vihla~   60 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARGH-EVTLVSRKPGPG------------RIT---WD----ELAASGLPSCDAAVNLAG   60 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCTT------------EEE---HH----HHHHHCCCSCSEEEECCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCCCcC------------eee---cc----hhhHhhccCCCEEEEecc
Confidence            5899999999999999999999999 999999976421            111   22    334456789999999998


Q ss_pred             cCCCCC---C-CCchhhhhhhHHhHHHHHHHHHHhcCCC--EEEEecceeeeecCCCCCCccccCCCCCchhhhhccCch
Q 023689           90 PCTLED---P-VDPEKELILPAVQGTLNVLEAAKRFGVR--RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW  163 (278)
Q Consensus        90 ~~~~~~---~-~~~~~~~~~~n~~~~~~ll~~~~~~~~~--~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  163 (278)
                      ......   + .......++.|+.+|.+|++++++.+.+  .||+.||.+ +|+...  ..+.+|+++..+.      +.
T Consensus        61 ~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~-vyg~~~--~~~~~E~~p~~~~------~~  131 (298)
T 4b4o_A           61 ENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVA-YYQPSL--TAEYDEDSPGGDF------DF  131 (298)
T ss_dssp             CCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGG-GSCCCS--SCCBCTTCCCSCS------SH
T ss_pred             CcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeee-eecCCC--CCcccccCCcccc------ch
Confidence            533211   1 1233567889999999999999887644  477777644 444433  3678888876553      56


Q ss_pred             hhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcc--cccccCcccHHHHHHHHHhh
Q 023689          164 YPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ--EYHWLGAVPVKDVAKAQVLL  241 (278)
Q Consensus       164 y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~D~a~~~~~~  241 (278)
                      |+..+...|...  +....+++++++||+.|||+...    ....++.....+.....  +++.++|||++|+|++++.+
T Consensus       132 ~~~~~~~~e~~~--~~~~~~~~~~~~r~~~v~g~~~~----~~~~~~~~~~~~~~~~~g~g~~~~~~ihv~Dva~a~~~~  205 (298)
T 4b4o_A          132 FSNLVTKWEAAA--RLPGDSTRQVVVRSGVVLGRGGG----AMGHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILTHA  205 (298)
T ss_dssp             HHHHHHHHHHHH--CCSSSSSEEEEEEECEEECTTSH----HHHHHHHHHHTTCCCCBTTSCSBCCEEEHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHH--HhhccCCceeeeeeeeEEcCCCC----chhHHHHHHhcCCcceecccCceeecCcHHHHHHHHHHH
Confidence            777777766543  23356899999999999999742    33444444445554444  55899999999999999999


Q ss_pred             hcCCCCCceEEe-cCccccHHHHHHHHHHhCCC
Q 023689          242 FESPAASGRYLC-TNGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       242 ~~~~~~~~~~~~-~~~~~s~~e~~~~i~~~~~~  273 (278)
                      ++++...|+|++ +++++|++|+++.+.+.+++
T Consensus       206 ~~~~~~~g~yn~~~~~~~t~~e~~~~ia~~lgr  238 (298)
T 4b4o_A          206 LEANHVHGVLNGVAPSSATNAEFAQTFGAALGR  238 (298)
T ss_dssp             HHCTTCCEEEEESCSCCCBHHHHHHHHHHHHTC
T ss_pred             HhCCCCCCeEEEECCCccCHHHHHHHHHHHhCc
Confidence            999888888855 57789999999999999864

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=100.00  E-value=6.8e-34  Score=261.60  Aligned_cols=261  Identities=16%  Similarity=0.134  Sum_probs=188.5

Q ss_pred             cccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcc-cccCCCCCCCceEEEEccCCChhhHHHHhc--Cc
Q 023689            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSH-LFALPGAGDANLRVFEADVLDSGAVSRAVE--GC   81 (278)
Q Consensus         5 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~-~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~   81 (278)
                      +.+++|+|||||||||||++|+++|+++|+ .|++++|+...... ...+......+++++.+|++|++++.++++  ++
T Consensus         7 ~~~~~~~ilVTGatG~IG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~   85 (699)
T 1z45_A            7 SESTSKIVLVTGGAGYIGSHTVVELIENGY-DCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKI   85 (699)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCC
T ss_pred             cccCCCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhCCC
Confidence            355678999999999999999999999999 89999886543211 111000001168899999999999999998  89


Q ss_pred             cEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCC-CCCccccCCCCCchhhhhcc
Q 023689           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPG-WKGKVFDETSWTDLEYCKSR  160 (278)
Q Consensus        82 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~-~~~~~~~E~~~~~~~~~~~~  160 (278)
                      |+|||+|+........+.....+++|+.++.+++++|++.++++||++||.+++..... ....+++|+++..+      
T Consensus        86 D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~p------  159 (699)
T 1z45_A           86 DSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGP------  159 (699)
T ss_dssp             CEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCC------
T ss_pred             CEEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCCCccccccCCccccCCCCC------
Confidence            99999998754321123346789999999999999999999999999999665432111 01245677765444      


Q ss_pred             CchhhhHHHHHHHHHHHHHHh--cCCceEEEecceeeCCCCCCC--------CchhHHHHHHHhhC--CCCcc-------
Q 023689          161 KKWYPVSKTLAEKAAWEFAEK--HGVDVVAIHPATCLGPLMQPY--------LNASCAVLQQLLQG--SKDTQ-------  221 (278)
Q Consensus       161 ~~~y~~sK~~~e~~~~~~~~~--~~~~~~~lrp~~i~g~~~~~~--------~~~~~~~~~~~~~~--~~~~~-------  221 (278)
                      .+.|+.+|.++|.+++.++++  .+++++++||+.+||+.....        .......+.+...+  .++..       
T Consensus       160 ~~~Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  239 (699)
T 1z45_A          160 TNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDS  239 (699)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------
T ss_pred             CChHHHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccC
Confidence            368999999999999998876  799999999999999853211        11222333343332  23321       


Q ss_pred             --cccccCcccHHHHHHHHHhhhcCC------CC-CceEEe-cCccccHHHHHHHHHHhCC
Q 023689          222 --EYHWLGAVPVKDVAKAQVLLFESP------AA-SGRYLC-TNGIYQFGDFAERVSKLFP  272 (278)
Q Consensus       222 --~~~~~~~i~~~D~a~~~~~~~~~~------~~-~~~~~~-~~~~~s~~e~~~~i~~~~~  272 (278)
                        +.+.+++||++|+|++++.++++.      .. .++|++ +++.+|++|+++.+.+.++
T Consensus       240 ~~g~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g  300 (699)
T 1z45_A          240 RDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASG  300 (699)
T ss_dssp             CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHT
T ss_pred             CCCCeeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCCCcHHHHHHHHHHHhC
Confidence              346799999999999999988642      11 246755 5778999999999999874

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=100.00  E-value=2.8e-33  Score=238.67  Aligned_cols=242  Identities=14%  Similarity=0.139  Sum_probs=186.2

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCC-----CCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcC---
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNN-----YTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG---   80 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g-----~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~---   80 (278)
                      +|+|||||||||||++|+++|+++|     + +|++++|+..... .      ...+++++.+|++|++++.+++++   
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~-~V~~~~r~~~~~~-~------~~~~~~~~~~Dl~d~~~~~~~~~~~~~   72 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPW-KVYGVARRTRPAW-H------EDNPINYVQCDISDPDDSQAKLSPLTD   72 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSE-EEEEEESSCCCSC-C------CSSCCEEEECCTTSHHHHHHHHTTCTT
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCce-EEEEEeCCCCccc-c------ccCceEEEEeecCCHHHHHHHHhcCCC
Confidence            4789999999999999999999999     8 8999999775543 1      112789999999999999999998   


Q ss_pred             ccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhc--CCCEEE-------EecceeeeecCCCCCCccccCCCC
Q 023689           81 CKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVV-------VTSSISAIVPNPGWKGKVFDETSW  151 (278)
Q Consensus        81 ~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~v-------~~Ss~~~~~~~~~~~~~~~~E~~~  151 (278)
                      +|+|||+|+...     .++...+++|+.++.+++++|++.  ++++||       |+||.++ |+.......+++|+++
T Consensus        73 ~d~vih~a~~~~-----~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~v-yg~~~~~~~~~~E~~~  146 (364)
T 2v6g_A           73 VTHVFYVTWANR-----STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFES-YGKIESHDPPYTEDLP  146 (364)
T ss_dssp             CCEEEECCCCCC-----SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGG-TTTSCCCCSSBCTTSC
T ss_pred             CCEEEECCCCCc-----chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhh-ccccccCCCCCCcccc
Confidence            999999998743     457889999999999999999998  789998       7888655 4332112356788876


Q ss_pred             CchhhhhccCchhhhHHHHHHHHHHHHHHhcC-CceEEEecceeeCCCCCCCCch-hHH-HHHHH--hhCCCCcc-cc--
Q 023689          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHG-VDVVAIHPATCLGPLMQPYLNA-SCA-VLQQL--LQGSKDTQ-EY--  223 (278)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~-~~~~~lrp~~i~g~~~~~~~~~-~~~-~~~~~--~~~~~~~~-~~--  223 (278)
                      ..+.     .+.|    +.+|++++.++++++ ++++++||+.+||+........ ... ++..+  ..+.+..+ ++  
T Consensus       147 ~~~~-----~~~y----~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~  217 (364)
T 2v6g_A          147 RLKY-----MNFY----YDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKA  217 (364)
T ss_dssp             CCSS-----CCHH----HHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHH
T ss_pred             CCcc-----chhh----HHHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCcc
Confidence            5442     2456    458888888887777 9999999999999987643222 223 23333  25665543 22  


Q ss_pred             ---cccCcccHHHHHHHHHhhhcCCCCCc-eEEec-CccccHHHHHHHHHHhCCC
Q 023689          224 ---HWLGAVPVKDVAKAQVLLFESPAASG-RYLCT-NGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       224 ---~~~~~i~~~D~a~~~~~~~~~~~~~~-~~~~~-~~~~s~~e~~~~i~~~~~~  273 (278)
                         ...+++|++|+|++++.+++++...| +|+++ ++.+|+.|+++.+.+.++.
T Consensus       218 ~~~~~~~~~~v~Dva~a~~~~~~~~~~~g~~~ni~~~~~~s~~e~~~~i~~~~g~  272 (364)
T 2v6g_A          218 AWDGYSDCSDADLIAEHHIWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGV  272 (364)
T ss_dssp             HHHSCBCCEEHHHHHHHHHHHHHCGGGTTEEEEECCSCCBCHHHHHHHHHHHHTC
T ss_pred             cccccCCCCcHHHHHHHHHHHHhCCCCCCceEEecCCCcCCHHHHHHHHHHHhCC
Confidence               35788889999999999998865444 78665 5679999999999998853

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=100.00  E-value=3.3e-34  Score=234.40  Aligned_cols=215  Identities=20%  Similarity=0.249  Sum_probs=174.4

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEec
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a   88 (278)
                      ||+|||||||||||++|+++|+++|+ +|++++|++....  .       .+++++.+|++|++++.++++++|+|||+|
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~--~-------~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a   71 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLAH-EVRLSDIVDLGAA--E-------AHEEIVACDLADAQAVHDLVKDCDGIIHLG   71 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTEE-EEEECCSSCCCCC--C-------TTEEECCCCTTCHHHHHHHHTTCSEEEECC
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCCC-EEEEEeCCCcccc--C-------CCccEEEccCCCHHHHHHHHcCCCEEEECC
Confidence            47899999999999999999999998 9999999765321  1       178899999999999999999999999999


Q ss_pred             ccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhhHH
Q 023689           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK  168 (278)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK  168 (278)
                      +...    ...+...+++|+.++.++++++++.++++||++||..++...+.  ..+++|+++..+.      +.|+.+|
T Consensus        72 ~~~~----~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~--~~~~~E~~~~~~~------~~Y~~sK  139 (267)
T 3ay3_A           72 GVSV----ERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPR--TTRIDTEVPRRPD------SLYGLSK  139 (267)
T ss_dssp             SCCS----CCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBT--TSCBCTTSCCCCC------SHHHHHH
T ss_pred             cCCC----CCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCC--CCCCCCCCCCCCC------ChHHHHH
Confidence            8753    35678899999999999999999999999999999776544332  2678888766543      6899999


Q ss_pred             HHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHHHHHHHHHhhhcCCCCC
Q 023689          169 TLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAAS  248 (278)
Q Consensus       169 ~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~  248 (278)
                      ..+|.+++.++++++++++++||+.+|+...                     .+...++++|++|+|++++.+++++...
T Consensus       140 ~~~e~~~~~~~~~~gi~~~~lrp~~v~~~~~---------------------~~~~~~~~~~~~dva~~~~~~~~~~~~~  198 (267)
T 3ay3_A          140 CFGEDLASLYYHKFDIETLNIRIGSCFPKPK---------------------DARMMATWLSVDDFMRLMKRAFVAPKLG  198 (267)
T ss_dssp             HHHHHHHHHHHHTTCCCEEEEEECBCSSSCC---------------------SHHHHHHBCCHHHHHHHHHHHHHSSCCC
T ss_pred             HHHHHHHHHHHHHcCCCEEEEeceeecCCCC---------------------CCCeeeccccHHHHHHHHHHHHhCCCCC
Confidence            9999999998888899999999999984321                     0112467899999999999999886553


Q ss_pred             -ceE-EecCccccHHHHHHH
Q 023689          249 -GRY-LCTNGIYQFGDFAER  266 (278)
Q Consensus       249 -~~~-~~~~~~~s~~e~~~~  266 (278)
                       ++| +.++...++.++.+.
T Consensus       199 ~~~~~~~~~~~~~~~d~~~~  218 (267)
T 3ay3_A          199 CTVVYGASANTESWWDNDKS  218 (267)
T ss_dssp             EEEEEECCSCSSCCBCCGGG
T ss_pred             ceeEecCCCccccccCHHHH
Confidence             345 445556666666655

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=100.00  E-value=1e-33  Score=225.42  Aligned_cols=218  Identities=11%  Similarity=0.033  Sum_probs=163.1

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEecc
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a~   89 (278)
                      |+|||||||||||++++++|+++|+ .|++++|+++....+..      .+++++.+|++|+++  ++++++|+|||+|+
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~------~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag   71 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRRGH-EVLAVVRDPQKAADRLG------ATVATLVKEPLVLTE--ADLDSVDAVVDALS   71 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHTC------TTSEEEECCGGGCCH--HHHTTCSEEEECCC
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHCCC-EEEEEEecccccccccC------CCceEEecccccccH--hhcccCCEEEECCc
Confidence            4799999999999999999999999 99999997655433221      188999999999987  78899999999998


Q ss_pred             cCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhhHHH
Q 023689           90 PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKT  169 (278)
Q Consensus        90 ~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~  169 (278)
                      ....       .....+|+.++.+++++|++.+ ++||++||.++++..+.....+.+|..++.+      .+.|+.+|.
T Consensus        72 ~~~~-------~~~~~~n~~~~~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~------~~~y~~sK~  137 (224)
T 3h2s_A           72 VPWG-------SGRGYLHLDFATHLVSLLRNSD-TLAVFILGSASLAMPGADHPMILDFPESAAS------QPWYDGALY  137 (224)
T ss_dssp             CCTT-------SSCTHHHHHHHHHHHHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGG------STTHHHHHH
T ss_pred             cCCC-------cchhhHHHHHHHHHHHHHHHcC-CcEEEEecceeeccCCCCccccccCCCCCcc------chhhHHHHH
Confidence            7521       1235789999999999999999 9999999988877655432234444443222      368999999


Q ss_pred             HHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHHHHHHHHHhhhcCCCCCc
Q 023689          170 LAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASG  249 (278)
Q Consensus       170 ~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~  249 (278)
                      .+|.+ ..+.++.+++++++||+.+||+.....  ..       ........+...+++++++|+|++++.+++++...|
T Consensus       138 ~~e~~-~~~~~~~~i~~~ivrp~~v~g~~~~~~--~~-------~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~g  207 (224)
T 3h2s_A          138 QYYEY-QFLQMNANVNWIGISPSEAFPSGPATS--YV-------AGKDTLLVGEDGQSHITTGNMALAILDQLEHPTAIR  207 (224)
T ss_dssp             HHHHH-HHHTTCTTSCEEEEEECSBCCCCCCCC--EE-------EESSBCCCCTTSCCBCCHHHHHHHHHHHHHSCCCTT
T ss_pred             HHHHH-HHHHhcCCCcEEEEcCccccCCCcccC--ce-------ecccccccCCCCCceEeHHHHHHHHHHHhcCccccC
Confidence            99954 455556799999999999999843322  10       112222334566899999999999999999987655


Q ss_pred             -eEEe-cCccccH
Q 023689          250 -RYLC-TNGIYQF  260 (278)
Q Consensus       250 -~~~~-~~~~~s~  260 (278)
                       +|++ +.++.++
T Consensus       208 ~~~~~~~~~~~~~  220 (224)
T 3h2s_A          208 DRIVVRDADLEHH  220 (224)
T ss_dssp             SEEEEEECC----
T ss_pred             CEEEEecCcchhc
Confidence             6754 4444443

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=100.00  E-value=9.2e-34  Score=229.66  Aligned_cols=230  Identities=20%  Similarity=0.159  Sum_probs=170.6

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHC--CCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDN--NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~--g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      +||+||||||+||||++++++|+++  |+ .|+++.|++.....+   .    .+++++.+|++|++++.++++++|+||
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~-~V~~~~r~~~~~~~~---~----~~~~~~~~D~~d~~~~~~~~~~~d~vi   74 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKF-VAKGLVRSAQGKEKI---G----GEADVFIGDITDADSINPAFQGIDALV   74 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTC-EEEEEESCHHHHHHT---T----CCTTEEECCTTSHHHHHHHHTTCSEEE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCc-EEEEEEcCCCchhhc---C----CCeeEEEecCCCHHHHHHHHcCCCEEE
Confidence            4689999999999999999999999  78 899999875433222   1    167789999999999999999999999


Q ss_pred             EecccCCCCC-------------CCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCC
Q 023689           86 HVASPCTLED-------------PVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (278)
Q Consensus        86 ~~a~~~~~~~-------------~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~  152 (278)
                      |+|+......             ..+.+...+++|+.++.+++++|++.++++||++||.++...           ..+.
T Consensus        75 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~~-----------~~~~  143 (253)
T 1xq6_A           75 ILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNP-----------DHPL  143 (253)
T ss_dssp             ECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCT-----------TCGG
T ss_pred             EeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCCC-----------CCcc
Confidence            9998653210             112223567999999999999999999999999999654211           1111


Q ss_pred             chhhhhccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHH
Q 023689          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVK  232 (278)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  232 (278)
                       ..|.   ...|+.+|..+|.+++    .++++++++||+.+||+...... ..        .+..........++++++
T Consensus       144 -~~~~---~~~y~~sK~~~e~~~~----~~~i~~~~vrpg~v~~~~~~~~~-~~--------~~~~~~~~~~~~~~~~~~  206 (253)
T 1xq6_A          144 -NKLG---NGNILVWKRKAEQYLA----DSGTPYTIIRAGGLLDKEGGVRE-LL--------VGKDDELLQTDTKTVPRA  206 (253)
T ss_dssp             -GGGG---GCCHHHHHHHHHHHHH----TSSSCEEEEEECEEECSCSSSSC-EE--------EESTTGGGGSSCCEEEHH
T ss_pred             -cccc---chhHHHHHHHHHHHHH----hCCCceEEEecceeecCCcchhh-hh--------ccCCcCCcCCCCcEEcHH
Confidence             1111   1358889999998875    57999999999999999753221 10        111111112246799999


Q ss_pred             HHHHHHHhhhcCCCCCc-eEEec-C---ccccHHHHHHHHHHhCCC
Q 023689          233 DVAKAQVLLFESPAASG-RYLCT-N---GIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       233 D~a~~~~~~~~~~~~~~-~~~~~-~---~~~s~~e~~~~i~~~~~~  273 (278)
                      |+|++++.+++++...+ .|+++ +   +.+++.|+++.+.+.+++
T Consensus       207 Dva~~~~~~~~~~~~~g~~~~i~~~~~~~~~s~~e~~~~~~~~~g~  252 (253)
T 1xq6_A          207 DVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVTSR  252 (253)
T ss_dssp             HHHHHHHHHTTCGGGTTEEEEEEECCTTTSCCCCCHHHHHHTCCCC
T ss_pred             HHHHHHHHHHcCccccCCEEEecCCCcCCCCCHHHHHHHHHHHhCC
Confidence            99999999998765444 67554 3   358999999999998864

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=100.00  E-value=2e-33  Score=240.09  Aligned_cols=209  Identities=20%  Similarity=0.179  Sum_probs=176.6

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccC-CChhhHHHHhcCccEEEEec
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADV-LDSGAVSRAVEGCKGVFHVA   88 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl-~d~~~~~~~~~~~d~vi~~a   88 (278)
                      |+|||||||||||++|+++|+++|+.+|++                          +|. +|++++.++++++|+|||+|
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~--------------------------~d~~~d~~~l~~~~~~~d~Vih~a   54 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFE--------------------------VHRQTKEEELESALLKADFIVHLA   54 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEE--------------------------CCTTCCHHHHHHHHHHCSEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEE--------------------------ECCCCCHHHHHHHhccCCEEEECC
Confidence            589999999999999999999998734443                          444 78899999999999999999


Q ss_pred             ccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCC-EEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhhH
Q 023689           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVS  167 (278)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~-~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~s  167 (278)
                      +....    +++...+++|+.++.+++++|++.+++ +||++||..++.                        .+.|+.+
T Consensus        55 ~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~------------------------~~~Y~~s  106 (369)
T 3st7_A           55 GVNRP----EHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ------------------------DNPYGES  106 (369)
T ss_dssp             CSBCT----TCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGS------------------------CSHHHHH
T ss_pred             cCCCC----CCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcC------------------------CCCchHH
Confidence            97653    356778999999999999999999887 899999866532                        1579999


Q ss_pred             HHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCC-CchhHHHHHHHhhCCCCcc--cccccCcccHHHHHHHHHhhhcC
Q 023689          168 KTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY-LNASCAVLQQLLQGSKDTQ--EYHWLGAVPVKDVAKAQVLLFES  244 (278)
Q Consensus       168 K~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~D~a~~~~~~~~~  244 (278)
                      |.++|++++.++++++++++++||+.+||+...+. ...+..++.....+.+...  +++.++++|++|+|++++.++++
T Consensus       107 K~~~E~~~~~~~~~~g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~  186 (369)
T 3st7_A          107 KLQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEG  186 (369)
T ss_dssp             HHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHHHHhC
Confidence            99999999999988999999999999999976554 3466777778888877665  45789999999999999999998


Q ss_pred             CCC--CceEEec-CccccHHHHHHHHHHhCC
Q 023689          245 PAA--SGRYLCT-NGIYQFGDFAERVSKLFP  272 (278)
Q Consensus       245 ~~~--~~~~~~~-~~~~s~~e~~~~i~~~~~  272 (278)
                      +..  ++.|+++ ++.+|+.|+++.+.+.++
T Consensus       187 ~~~~~~~~~~i~~~~~~s~~e~~~~~~~~~g  217 (369)
T 3st7_A          187 TPTIENGVPTVPNVFKVTLGEIVDLLYKFKQ  217 (369)
T ss_dssp             CCCEETTEECCSCCEEEEHHHHHHHHHHHHH
T ss_pred             CcccCCceEEeCCCCceeHHHHHHHHHHHhC
Confidence            876  4577554 678999999999998763

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=100.00  E-value=3.7e-33  Score=228.76  Aligned_cols=224  Identities=15%  Similarity=0.137  Sum_probs=178.0

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcC--ccEEEEe
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG--CKGVFHV   87 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~--~d~vi~~   87 (278)
                      |+|||||||||||++++++|++ |+ +|++++|++...          . +   +.+|++|++++.+++++  +|+|||+
T Consensus         1 m~ilVtGatG~iG~~l~~~L~~-g~-~V~~~~r~~~~~----------~-~---~~~Dl~~~~~~~~~~~~~~~d~vi~~   64 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLSE-RH-EVIKVYNSSEIQ----------G-G---YKLDLTDFPRLEDFIIKKRPDVIINA   64 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHTT-TS-CEEEEESSSCCT----------T-C---EECCTTSHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCChhHHHHHHHHhc-CC-eEEEecCCCcCC----------C-C---ceeccCCHHHHHHHHHhcCCCEEEEC
Confidence            4799999999999999999994 87 899999876421          1 3   78999999999999986  9999999


Q ss_pred             cccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhhH
Q 023689           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVS  167 (278)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~s  167 (278)
                      |+........++++..+++|+.++.+++++|++.+. +||++||.+++.+..    .+++|+++..+      .+.|+.+
T Consensus        65 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~iv~~SS~~~~~~~~----~~~~e~~~~~~------~~~Y~~s  133 (273)
T 2ggs_A           65 AAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVIDS-YIVHISTDYVFDGEK----GNYKEEDIPNP------INYYGLS  133 (273)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC-EEEEEEEGGGSCSSS----CSBCTTSCCCC------SSHHHHH
T ss_pred             CcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhCC-eEEEEecceeEcCCC----CCcCCCCCCCC------CCHHHHH
Confidence            987543222346788999999999999999998886 899999977754332    36778776544      2689999


Q ss_pred             HHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcc-cccccCcccHHHHHHHHHhhhcCCC
Q 023689          168 KTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ-EYHWLGAVPVKDVAKAQVLLFESPA  246 (278)
Q Consensus       168 K~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~D~a~~~~~~~~~~~  246 (278)
                      |.++|.+++     . ++++++||+.+||+     ......++.....+.+... ++ .++++|++|+|++++.+++++.
T Consensus       134 K~~~e~~~~-----~-~~~~~iR~~~v~G~-----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dva~~i~~~~~~~~  201 (273)
T 2ggs_A          134 KLLGETFAL-----Q-DDSLIIRTSGIFRN-----KGFPIYVYKTLKEGKTVFAFKG-YYSPISARKLASAILELLELRK  201 (273)
T ss_dssp             HHHHHHHHC-----C-TTCEEEEECCCBSS-----SSHHHHHHHHHHTTCCEEEESC-EECCCBHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHh-----C-CCeEEEeccccccc-----cHHHHHHHHHHHcCCCEEeecC-CCCceEHHHHHHHHHHHHhcCc
Confidence            999999884     3 78999999999982     1234445555556655433 33 7899999999999999998754


Q ss_pred             CCceEEecCccccHHHHHHHHHHhCCC
Q 023689          247 ASGRYLCTNGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       247 ~~~~~~~~~~~~s~~e~~~~i~~~~~~  273 (278)
                       .|+|+++++.+|++|+++.+.+.++.
T Consensus       202 -~g~~~i~~~~~s~~e~~~~~~~~~g~  227 (273)
T 2ggs_A          202 -TGIIHVAGERISRFELALKIKEKFNL  227 (273)
T ss_dssp             -CEEEECCCCCEEHHHHHHHHHHHTTC
T ss_pred             -CCeEEECCCcccHHHHHHHHHHHhCC
Confidence             56887766889999999999999853

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=100.00  E-value=2.6e-33  Score=248.92  Aligned_cols=234  Identities=15%  Similarity=0.127  Sum_probs=175.6

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEec
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a   88 (278)
                      ||+|||||||||||++|++.|++.|+ .|++++|+.....              .+.+|+.+.  +.++++++|+|||+|
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~-~V~~l~R~~~~~~--------------~v~~d~~~~--~~~~l~~~D~Vih~A  209 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGH-EVIQLVRKEPKPG--------------KRFWDPLNP--ASDLLDGADVLVHLA  209 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSSCCTT--------------CEECCTTSC--CTTTTTTCSEEEECC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCCCCcc--------------ceeecccch--hHHhcCCCCEEEECC
Confidence            78999999999999999999999999 9999999875421              245777653  466778999999999


Q ss_pred             ccCCCCC-CCCchhhhhhhHHhHHHHHHHH-HHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhh
Q 023689           89 SPCTLED-PVDPEKELILPAVQGTLNVLEA-AKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPV  166 (278)
Q Consensus        89 ~~~~~~~-~~~~~~~~~~~n~~~~~~ll~~-~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~  166 (278)
                      +...... ....+...+++|+.++.+++++ +++.++++||++||.+++.....  ..+++|+++..       .+.|+.
T Consensus       210 ~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~--~~~~~E~~~~~-------~~~y~~  280 (516)
T 3oh8_A          210 GEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRG--DEILTEESESG-------DDFLAE  280 (516)
T ss_dssp             CC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEE--EEEECTTSCCC-------SSHHHH
T ss_pred             CCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCC--CCccCCCCCCC-------cChHHH
Confidence            9754322 2345677899999999999999 56678899999998665431222  35788887652       267999


Q ss_pred             HHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcc--cccccCcccHHHHHHHHHhhhcC
Q 023689          167 SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ--EYHWLGAVPVKDVAKAQVLLFES  244 (278)
Q Consensus       167 sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~D~a~~~~~~~~~  244 (278)
                      +|...|.+... +++.|++++++||+.+||+..    .....++.....+.....  +++.+++||++|+|++++.++++
T Consensus       281 ~~~~~E~~~~~-~~~~gi~~~ilRp~~v~Gp~~----~~~~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~  355 (516)
T 3oh8_A          281 VCRDWEHATAP-ASDAGKRVAFIRTGVALSGRG----GMLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIYYRAIVD  355 (516)
T ss_dssp             HHHHHHHTTHH-HHHTTCEEEEEEECEEEBTTB----SHHHHHHHTTC---CCCCTTSCCEECEEEHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHH-HHhCCCCEEEEEeeEEECCCC----ChHHHHHHHHHhCCCcccCCCCceEceEeHHHHHHHHHHHHhC
Confidence            99999987654 446799999999999999973    233444444444443333  45789999999999999999998


Q ss_pred             CCCCceEE-ecCccccHHHHHHHHHHhCCC
Q 023689          245 PAASGRYL-CTNGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       245 ~~~~~~~~-~~~~~~s~~e~~~~i~~~~~~  273 (278)
                      +...|+|+ ++++.+|+.|+++.+.+.++.
T Consensus       356 ~~~~g~~ni~~~~~~s~~el~~~i~~~~g~  385 (516)
T 3oh8_A          356 AQISGPINAVAPNPVSNADMTKILATSMHR  385 (516)
T ss_dssp             TTCCEEEEESCSCCEEHHHHHHHTTC----
T ss_pred             cccCCcEEEECCCCCCHHHHHHHHHHHhCC
Confidence            77777775 567789999999999998753

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=100.00  E-value=2e-32  Score=226.00  Aligned_cols=214  Identities=19%  Similarity=0.202  Sum_probs=168.4

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHC--CCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEe
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDN--NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~--g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~   87 (278)
                      |+|||||||||||++++++|+++  |+ +|++++|++.....+...      +++++.+|++|++++.++++++|+|||+
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~l~~~------~~~~~~~D~~d~~~l~~~~~~~d~vi~~   73 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPAS-QIIAIVRNVEKASTLADQ------GVEVRHGDYNQPESLQKAFAGVSKLLFI   73 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGG-GEEEEESCTTTTHHHHHT------TCEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCC-eEEEEEcCHHHHhHHhhc------CCeEEEeccCCHHHHHHHHhcCCEEEEc
Confidence            57999999999999999999998  98 899999977654433221      7889999999999999999999999999


Q ss_pred             cccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhhH
Q 023689           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVS  167 (278)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~s  167 (278)
                      |+...     .   .  ++|+.++.+++++|++.++++||++||.+++ ..               +       ..|+.+
T Consensus        74 a~~~~-----~---~--~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~-~~---------------~-------~~y~~~  120 (287)
T 2jl1_A           74 SGPHY-----D---N--TLLIVQHANVVKAARDAGVKHIAYTGYAFAE-ES---------------I-------IPLAHV  120 (287)
T ss_dssp             CCCCS-----C---H--HHHHHHHHHHHHHHHHTTCSEEEEEEETTGG-GC---------------C-------STHHHH
T ss_pred             CCCCc-----C---c--hHHHHHHHHHHHHHHHcCCCEEEEECCCCCC-CC---------------C-------CchHHH
Confidence            98521     1   1  6799999999999999999999999986542 10               1       369999


Q ss_pred             HHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCC-cccccccCcccHHHHHHHHHhhhcCCC
Q 023689          168 KTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKD-TQEYHWLGAVPVKDVAKAQVLLFESPA  246 (278)
Q Consensus       168 K~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~D~a~~~~~~~~~~~  246 (278)
                      |..+|++++    +++++++++||+.++|+....   .+...   ...+... ..+++.++++|++|+|++++.++.++.
T Consensus       121 K~~~E~~~~----~~~~~~~ilrp~~~~~~~~~~---~~~~~---~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~  190 (287)
T 2jl1_A          121 HLATEYAIR----TTNIPYTFLRNALYTDFFVNE---GLRAS---TESGAIVTNAGSGIVNSVTRNELALAAATVLTEEG  190 (287)
T ss_dssp             HHHHHHHHH----HTTCCEEEEEECCBHHHHSSG---GGHHH---HHHTEEEESCTTCCBCCBCHHHHHHHHHHHHTSSS
T ss_pred             HHHHHHHHH----HcCCCeEEEECCEeccccchh---hHHHH---hhCCceeccCCCCccCccCHHHHHHHHHHHhcCCC
Confidence            999999885    579999999999888864211   22221   1223322 224578899999999999999998765


Q ss_pred             CCc-eEEec-CccccHHHHHHHHHHhCCC
Q 023689          247 ASG-RYLCT-NGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       247 ~~~-~~~~~-~~~~s~~e~~~~i~~~~~~  273 (278)
                      ..| .|+++ ++.+|+.|+++.+.+.++.
T Consensus       191 ~~g~~~~i~~~~~~s~~e~~~~i~~~~g~  219 (287)
T 2jl1_A          191 HENKTYNLVSNQPWTFDELAQILSEVSGK  219 (287)
T ss_dssp             CTTEEEEECCSSCBCHHHHHHHHHHHHSS
T ss_pred             CCCcEEEecCCCcCCHHHHHHHHHHHHCC
Confidence            444 67655 5689999999999998853

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=100.00  E-value=1.8e-32  Score=217.79  Aligned_cols=214  Identities=12%  Similarity=0.108  Sum_probs=145.3

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEecc
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a~   89 (278)
                      |+|||||||||||++++++|+++|+ +|++++|+++....+.       .+++++.+|++|+++  +++.++|+|||+|+
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~-------~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag   70 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGH-EVTAIVRNAGKITQTH-------KDINILQKDIFDLTL--SDLSDQNVVVDAYG   70 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCSHHHHHHC-------SSSEEEECCGGGCCH--HHHTTCSEEEECCC
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC-EEEEEEcCchhhhhcc-------CCCeEEeccccChhh--hhhcCCCEEEECCc
Confidence            5799999999999999999999999 9999999875544332       188999999999987  78899999999998


Q ss_pred             cCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhhHHH
Q 023689           90 PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKT  169 (278)
Q Consensus        90 ~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~  169 (278)
                      ...         .....|+.++.+++++|++.+++++|++||..++++.+..  .+..|+.+..+      .+.|+.+|.
T Consensus        71 ~~~---------~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~--~~~~~~~~~~~------~~~y~~~k~  133 (221)
T 3ew7_A           71 ISP---------DEAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDG--NTLLESKGLRE------APYYPTARA  133 (221)
T ss_dssp             SST---------TTTTSHHHHHHHHHHHHCSCCSSEEEEECCCC---------------------------CCCSCCHHH
T ss_pred             CCc---------cccchHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCC--ccccccCCCCC------HHHHHHHHH
Confidence            732         1356799999999999999988999999998888776542  34445444333      367999999


Q ss_pred             HHHHHHHHHHH-hcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHHHHHHHHHhhhcCCCCC
Q 023689          170 LAEKAAWEFAE-KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAAS  248 (278)
Q Consensus       170 ~~e~~~~~~~~-~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~  248 (278)
                      ..|.+ ..+.+ .++++++++||+.+||+......     +  . ..+..........++++++|+|++++.+++++...
T Consensus       134 ~~e~~-~~~~~~~~gi~~~ivrp~~v~g~~~~~~~-----~--~-~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~  204 (221)
T 3ew7_A          134 QAKQL-EHLKSHQAEFSWTYISPSAMFEPGERTGD-----Y--Q-IGKDHLLFGSDGNSFISMEDYAIAVLDEIERPNHL  204 (221)
T ss_dssp             HHHHH-HHHHTTTTTSCEEEEECSSCCCCC-----------------------------CCCHHHHHHHHHHHHHSCSCT
T ss_pred             HHHHH-HHHHhhccCccEEEEeCcceecCCCccCc-----e--E-eccccceecCCCCceEeHHHHHHHHHHHHhCcccc
Confidence            99986 33333 67999999999999998432110     0  0 11122222223357999999999999999998776


Q ss_pred             c-eEEecC-cccc
Q 023689          249 G-RYLCTN-GIYQ  259 (278)
Q Consensus       249 ~-~~~~~~-~~~s  259 (278)
                      | +|++.+ ...+
T Consensus       205 g~~~~~~~~~~~~  217 (221)
T 3ew7_A          205 NEHFTVAGKLEHH  217 (221)
T ss_dssp             TSEEECCC-----
T ss_pred             CCEEEECCCCccc
Confidence            6 676554 3444

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=100.00  E-value=1.8e-32  Score=225.71  Aligned_cols=240  Identities=16%  Similarity=0.131  Sum_probs=171.2

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc-------
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------   79 (278)
                      +++|++|||||+|+||++++++|+++|+ .|++..|+.+....+....   ..+++++.+|++|++++.++++       
T Consensus         3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g   78 (281)
T 3m1a_A            3 ESAKVWLVTGASSGFGRAIAEAAVAAGD-TVIGTARRTEALDDLVAAY---PDRAEAISLDVTDGERIDVVAADVLARYG   78 (281)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHC---TTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhc---cCCceEEEeeCCCHHHHHHHHHHHHHhCC
Confidence            4578999999999999999999999999 8999998776544332211   1278999999999999988876       


Q ss_pred             CccEEEEecccCCC----CCCCCchhhhhhhHHhH----HHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCC
Q 023689           80 GCKGVFHVASPCTL----EDPVDPEKELILPAVQG----TLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (278)
Q Consensus        80 ~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~----~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~  151 (278)
                      ++|+|||+||....    +...++++..+++|+.|    ++.+++.+++++.++||++||..+..+.+..          
T Consensus        79 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~----------  148 (281)
T 3m1a_A           79 RVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAGF----------  148 (281)
T ss_dssp             CCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTC----------
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCCCc----------
Confidence            68999999997543    22335667889999999    5566666677778899999998776554332          


Q ss_pred             CchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCC----chhHHHHHHHhhCCCCccccc
Q 023689          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYL----NASCAVLQQLLQGSKDTQEYH  224 (278)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~  224 (278)
                                ..|+.||.+.|.+.+.++.+   +|+++++++||.+.++......    .....+........+......
T Consensus       149 ----------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (281)
T 3m1a_A          149 ----------SAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSD  218 (281)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC--
T ss_pred             ----------hHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhcc
Confidence                      57999999999999999877   7999999999999988643221    011111111111111111123


Q ss_pred             ccCcccHHHHHHHHHhhhcCCCCCceEEec-CccccHHHHHHHHHHh
Q 023689          225 WLGAVPVKDVAKAQVLLFESPAASGRYLCT-NGIYQFGDFAERVSKL  270 (278)
Q Consensus       225 ~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~i~~~  270 (278)
                      ..++.+++|+|++++.+++++...++|+++ +....+.+....+.+.
T Consensus       219 ~~~~~~~~dva~a~~~~~~~~~~~~~~~l~s~~~~~i~g~~~~i~~~  265 (281)
T 3m1a_A          219 GSQPGDPAKAAAAIRLALDTEKTPLRLALGGDAVDFLTGHLDSVRAE  265 (281)
T ss_dssp             ---CBCHHHHHHHHHHHHHSSSCCSEEEESHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHhCCCCCeEEecCchHHHHHHHHHHHHHHH
Confidence            467889999999999999988776676554 5455556555555543

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.98  E-value=1.6e-31  Score=215.25  Aligned_cols=210  Identities=17%  Similarity=0.082  Sum_probs=161.3

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCC-eEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYT-SINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~-~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      +++|+||||||||+||++++++|+++|+. +|++++|+++.......      .+++++.+|++|++++.++++++|+||
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~------~~~~~~~~D~~d~~~~~~~~~~~d~vi   89 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAY------KNVNQEVVDFEKLDDYASAFQGHDVGF   89 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGG------GGCEEEECCGGGGGGGGGGGSSCSEEE
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCcccccc------CCceEEecCcCCHHHHHHHhcCCCEEE
Confidence            34689999999999999999999999972 68888887765433221      178899999999999999999999999


Q ss_pred             EecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhh
Q 023689           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYP  165 (278)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~  165 (278)
                      |+||....   ...++..+++|+.++.++++++++.++++||++||.+++.. +                     ...|+
T Consensus        90 ~~ag~~~~---~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~-~---------------------~~~Y~  144 (242)
T 2bka_A           90 CCLGTTRG---KAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKS-S---------------------NFLYL  144 (242)
T ss_dssp             ECCCCCHH---HHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT-C---------------------SSHHH
T ss_pred             ECCCcccc---cCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCCC-C---------------------cchHH
Confidence            99986432   12457889999999999999999999899999999665321 1                     14799


Q ss_pred             hHHHHHHHHHHHHHHhcCC-ceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHHHHHHHHHhhhcC
Q 023689          166 VSKTLAEKAAWEFAEKHGV-DVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFES  244 (278)
Q Consensus       166 ~sK~~~e~~~~~~~~~~~~-~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~  244 (278)
                      .+|...|.+++    ..++ +++++||+.++|+.....  ....+........+...+  ...+++++|+|++++.++.+
T Consensus       145 ~sK~~~e~~~~----~~~~~~~~~vrpg~v~~~~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~dva~~~~~~~~~  216 (242)
T 2bka_A          145 QVKGEVEAKVE----ELKFDRYSVFRPGVLLCDRQESR--PGEWLVRKFFGSLPDSWA--SGHSVPVVTVVRAMLNNVVR  216 (242)
T ss_dssp             HHHHHHHHHHH----TTCCSEEEEEECCEEECTTGGGS--HHHHHHHHHHCSCCTTGG--GGTEEEHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHH----hcCCCCeEEEcCceecCCCCCCc--HHHHHHHHhhcccCcccc--CCcccCHHHHHHHHHHHHhC
Confidence            99999998886    5578 599999999999975332  222333333333332222  34689999999999999998


Q ss_pred             CCCCceEEecC
Q 023689          245 PAASGRYLCTN  255 (278)
Q Consensus       245 ~~~~~~~~~~~  255 (278)
                      +...+.+++.+
T Consensus       217 ~~~~~~~~~~~  227 (242)
T 2bka_A          217 PRDKQMELLEN  227 (242)
T ss_dssp             CCCSSEEEEEH
T ss_pred             ccccCeeEeeH
Confidence            77767776543

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.98  E-value=6.9e-31  Score=217.06  Aligned_cols=211  Identities=19%  Similarity=0.257  Sum_probs=160.9

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHC-CCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEec
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~-g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a   88 (278)
                      |+|||||||||||++++++|.+. |+ .|++++|+++....+...      +++++.+|++|++++.++++++|+|||+|
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~~g~-~V~~~~R~~~~~~~~~~~------~v~~~~~D~~d~~~l~~~~~~~d~vi~~a   73 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIANHID-HFHIGVRNVEKVPDDWRG------KVSVRQLDYFNQESMVEAFKGMDTVVFIP   73 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCT-TEEEEESSGGGSCGGGBT------TBEEEECCTTCHHHHHHHTTTCSEEEECC
T ss_pred             CEEEEEcCCchHHHHHHHHHhhCCCC-cEEEEECCHHHHHHhhhC------CCEEEEcCCCCHHHHHHHHhCCCEEEEeC
Confidence            47999999999999999999998 88 899999987665443321      89999999999999999999999999999


Q ss_pred             ccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhhHH
Q 023689           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK  168 (278)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK  168 (278)
                      +....          ...|+.++.+++++|++.++++||++||.+...   .                     .+|..++
T Consensus        74 ~~~~~----------~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~~~---~---------------------~~~~~~~  119 (289)
T 3e48_A           74 SIIHP----------SFKRIPEVENLVYAAKQSGVAHIIFIGYYADQH---N---------------------NPFHMSP  119 (289)
T ss_dssp             CCCCS----------HHHHHHHHHHHHHHHHHTTCCEEEEEEESCCST---T---------------------CCSTTHH
T ss_pred             CCCcc----------chhhHHHHHHHHHHHHHcCCCEEEEEcccCCCC---C---------------------CCCccch
Confidence            86331          134889999999999999999999999833210   0                     1122222


Q ss_pred             --HHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCC--cccccccCcccHHHHHHHHHhhhcC
Q 023689          169 --TLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKD--TQEYHWLGAVPVKDVAKAQVLLFES  244 (278)
Q Consensus       169 --~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~D~a~~~~~~~~~  244 (278)
                        ...|..+    +++|++++++||+.++|+..        .++.....+...  ..+++.+++++++|+|++++.++.+
T Consensus       120 ~~~~~e~~~----~~~g~~~~ilrp~~~~~~~~--------~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~  187 (289)
T 3e48_A          120 YFGYASRLL----STSGIDYTYVRMAMYMDPLK--------PYLPELMNMHKLIYPAGDGRINYITRNDIARGVIAIIKN  187 (289)
T ss_dssp             HHHHHHHHH----HHHCCEEEEEEECEESTTHH--------HHHHHHHHHTEECCCCTTCEEEEECHHHHHHHHHHHHHC
T ss_pred             hHHHHHHHH----HHcCCCEEEEeccccccccH--------HHHHHHHHCCCEecCCCCceeeeEEHHHHHHHHHHHHcC
Confidence              2333333    36799999999999999731        122222222222  2245788999999999999999998


Q ss_pred             CCCCc-eEEecCccccHHHHHHHHHHhCCC
Q 023689          245 PAASG-RYLCTNGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       245 ~~~~~-~~~~~~~~~s~~e~~~~i~~~~~~  273 (278)
                      +...| .|+++++.+|+.|+++.+.+.++.
T Consensus       188 ~~~~g~~~~~~~~~~s~~e~~~~~~~~~g~  217 (289)
T 3e48_A          188 PDTWGKRYLLSGYSYDMKELAAILSEASGT  217 (289)
T ss_dssp             GGGTTCEEEECCEEEEHHHHHHHHHHHHTS
T ss_pred             CCcCCceEEeCCCcCCHHHHHHHHHHHHCC
Confidence            76534 676668899999999999998854

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.97  E-value=4.6e-31  Score=217.69  Aligned_cols=209  Identities=19%  Similarity=0.201  Sum_probs=159.7

Q ss_pred             eEEEeCcchhhHHHHHHHHHHC--CCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEec
Q 023689           11 TVCVTGANGFIGTWLVKTLLDN--NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (278)
Q Consensus        11 ~vlItGatG~iG~~l~~~L~~~--g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a   88 (278)
                      +|||||||||||++++++|+++  |+ +|++++|+++....+...      +++++.+|++|++++.++++++|+|||+|
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~~~~~------~~~~~~~D~~d~~~~~~~~~~~d~vi~~a   73 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPAS-QIVAIVRNPAKAQALAAQ------GITVRQADYGDEAALTSALQGVEKLLLIS   73 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGG-GEEEEESCTTTCHHHHHT------TCEEEECCTTCHHHHHHHTTTCSEEEECC
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCc-eEEEEEcChHhhhhhhcC------CCeEEEcCCCCHHHHHHHHhCCCEEEEeC
Confidence            5899999999999999999998  98 899999977654433221      78899999999999999999999999999


Q ss_pred             ccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhhHH
Q 023689           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK  168 (278)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK  168 (278)
                      +...            ..|+.++.+++++|++.++++||++||..++ .  .             +       ..|+.+|
T Consensus        74 ~~~~------------~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~-~--~-------------~-------~~y~~sK  118 (286)
T 2zcu_A           74 SSEV------------GQRAPQHRNVINAAKAAGVKFIAYTSLLHAD-T--S-------------P-------LGLADEH  118 (286)
T ss_dssp             --------------------CHHHHHHHHHHHHTCCEEEEEEETTTT-T--C-------------C-------STTHHHH
T ss_pred             CCCc------------hHHHHHHHHHHHHHHHcCCCEEEEECCCCCC-C--C-------------c-------chhHHHH
Confidence            8521            1478899999999999999999999986542 1  0             1       3699999


Q ss_pred             HHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcc--cccccCcccHHHHHHHHHhhhcCCC
Q 023689          169 TLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ--EYHWLGAVPVKDVAKAQVLLFESPA  246 (278)
Q Consensus       169 ~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~D~a~~~~~~~~~~~  246 (278)
                      ..+|++++    +++++++++||+.++++..    ..    +.+...+.....  +++.++++|++|+|++++.++.++.
T Consensus       119 ~~~e~~~~----~~~~~~~ilrp~~~~~~~~----~~----~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~  186 (286)
T 2zcu_A          119 IETEKMLA----DSGIVYTLLRNGWYSENYL----AS----APAALEHGVFIGAAGDGKIASATRADYAAAAARVISEAG  186 (286)
T ss_dssp             HHHHHHHH----HHCSEEEEEEECCBHHHHH----TT----HHHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHHSSS
T ss_pred             HHHHHHHH----HcCCCeEEEeChHHhhhhH----HH----hHHhhcCCceeccCCCCccccccHHHHHHHHHHHhcCCC
Confidence            99999886    4699999999987666531    11    122222222222  3578999999999999999998765


Q ss_pred             CCc-eEEec-CccccHHHHHHHHHHhCCC
Q 023689          247 ASG-RYLCT-NGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       247 ~~~-~~~~~-~~~~s~~e~~~~i~~~~~~  273 (278)
                      ..| .|+++ ++.+|+.|+++.+.+.++.
T Consensus       187 ~~g~~~~i~~~~~~s~~e~~~~i~~~~g~  215 (286)
T 2zcu_A          187 HEGKVYELAGDSAWTLTQLAAELTKQSGK  215 (286)
T ss_dssp             CTTCEEEECCSSCBCHHHHHHHHHHHHSS
T ss_pred             CCCceEEEeCCCcCCHHHHHHHHHHHHCC
Confidence            444 67665 5589999999999998753

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.97  E-value=1.3e-30  Score=214.29  Aligned_cols=240  Identities=17%  Similarity=0.184  Sum_probs=176.4

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      .+++|++|||||+|+||++++++|+++|+ .|++++|+.+....+. .+.. .. ++.++.+|++|++++.++++     
T Consensus        13 ~l~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~~~~~~~~~~~~   89 (278)
T 2bgk_A           13 RLQDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADIADDHGQKVCNNIGS-PD-VISFVHCDVTKDEDVRNLVDTTIAK   89 (278)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCC-TT-TEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCChhHHHHHHHHhCC-CC-ceEEEECCCCCHHHHHHHHHHHHHH
Confidence            35678999999999999999999999999 8888888654322221 1111 11 68999999999999988876     


Q ss_pred             --CccEEEEecccCCC------CCCCCchhhhhhhHHhHHHHHHHHHHh----cCCCEEEEecceeeeecCCCCCCcccc
Q 023689           80 --GCKGVFHVASPCTL------EDPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFD  147 (278)
Q Consensus        80 --~~d~vi~~a~~~~~------~~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~  147 (278)
                        ++|+|||+||....      +...+.++..+++|+.++.++++++.+    .+.++||++||..++.+.+.       
T Consensus        90 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-------  162 (278)
T 2bgk_A           90 HGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEG-------  162 (278)
T ss_dssp             HSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTT-------
T ss_pred             cCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCCC-------
Confidence              78999999997532      112245678999999999999988855    36789999999777544321       


Q ss_pred             CCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccc
Q 023689          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (278)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (278)
                                  ....|+.+|.+.+.+.+.++.+   +|++++++|||.++|+...............+....+    ..
T Consensus       163 ------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~----~~  226 (278)
T 2bgk_A          163 ------------VSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAA----NL  226 (278)
T ss_dssp             ------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTC----SS
T ss_pred             ------------CCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhccc----cc
Confidence                        1257999999999999988865   5999999999999999755432212222333322221    12


Q ss_pred             ccCcccHHHHHHHHHhhhcCCC--CCc-eEEe-cCccccHHHHHHHHHHhC
Q 023689          225 WLGAVPVKDVAKAQVLLFESPA--ASG-RYLC-TNGIYQFGDFAERVSKLF  271 (278)
Q Consensus       225 ~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~-~~~~~s~~e~~~~i~~~~  271 (278)
                      ...+++++|+|+++++++....  ..| .+++ ++..+++.|+++.+.+.+
T Consensus       227 ~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e~~~~i~~~~  277 (278)
T 2bgk_A          227 KGTLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYTRTNPAFPTALKHGL  277 (278)
T ss_dssp             CSCCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCCTHHHHHSCSCC
T ss_pred             ccccCCHHHHHHHHHHHcCcccccCCCCEEEECCcccccCCccchhhhhhc
Confidence            3568999999999999986542  335 4555 456789999999887654

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.97  E-value=7.2e-30  Score=207.57  Aligned_cols=215  Identities=19%  Similarity=0.188  Sum_probs=165.5

Q ss_pred             ccccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc--
Q 023689            2 ASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--   79 (278)
Q Consensus         2 ~~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--   79 (278)
                      .+|+.+++|++|||||+|+||++++++|+++|+ .|++..|+.+.....         ++.++.+|++|++++.++++  
T Consensus        21 ~~m~~~~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~---------~~~~~~~Dv~d~~~v~~~~~~~   90 (260)
T 3un1_A           21 QSMMRNQQKVVVITGASQGIGAGLVRAYRDRNY-RVVATSRSIKPSADP---------DIHTVAGDISKPETADRIVREG   90 (260)
T ss_dssp             HHHHHTTCCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSCCCCSST---------TEEEEESCTTSHHHHHHHHHHH
T ss_pred             hhhhCcCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChhhcccC---------ceEEEEccCCCHHHHHHHHHHH
Confidence            467778889999999999999999999999999 899998876543221         78999999999999988876  


Q ss_pred             -----CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccc
Q 023689           80 -----GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVF  146 (278)
Q Consensus        80 -----~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~  146 (278)
                           ++|++||+||.....    ...++++..+++|+.|+.++++++    ++++.+++|++||..+..+.+.      
T Consensus        91 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~------  164 (260)
T 3un1_A           91 IERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVG------  164 (260)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTT------
T ss_pred             HHHCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCC------
Confidence                 789999999975542    233567888999999999999887    5567789999998655332211      


Q ss_pred             cCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccc
Q 023689          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (278)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (278)
                                  .+...|+.||.+.+.+.+.++.+.   |+++++++||.++++.....      .........|     
T Consensus       165 ------------~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~------~~~~~~~~~p-----  221 (260)
T 3un1_A          165 ------------MPSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAE------THSTLAGLHP-----  221 (260)
T ss_dssp             ------------CCCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGG------GHHHHHTTST-----
T ss_pred             ------------CccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHH------HHHHHhccCC-----
Confidence                        112579999999999999999876   89999999999999975432      1112222222     


Q ss_pred             cccCcccHHHHHHHHHhhhcCCCCCce-EEecCc
Q 023689          224 HWLGAVPVKDVAKAQVLLFESPAASGR-YLCTNG  256 (278)
Q Consensus       224 ~~~~~i~~~D~a~~~~~~~~~~~~~~~-~~~~~~  256 (278)
                       ...+.+++|+|++++++.+.....|. +++.++
T Consensus       222 -~~r~~~~~dva~av~~L~~~~~itG~~i~vdGG  254 (260)
T 3un1_A          222 -VGRMGEIRDVVDAVLYLEHAGFITGEILHVDGG  254 (260)
T ss_dssp             -TSSCBCHHHHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred             -CCCCcCHHHHHHHHHHhcccCCCCCcEEEECCC
Confidence             45678999999999999665555674 455443

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.97  E-value=1.1e-30  Score=221.23  Aligned_cols=224  Identities=13%  Similarity=0.083  Sum_probs=165.3

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCc-ccccCCCCCCCceEEEEccCCChhhHHHHhc--CccEEE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS-HLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVF   85 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~-~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vi   85 (278)
                      +|+|||||||||||++|++.|++.|+ .|++++|+..... ....+......+++++.+|++|.+++.++++  ++|+||
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi   88 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDAHR-PTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVV   88 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHTTC-CEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCC-CEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEE
Confidence            47999999999999999999999998 8999999763221 1110000001189999999999999999999  999999


Q ss_pred             EecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcC-CCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchh
Q 023689           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWY  164 (278)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y  164 (278)
                      |+|+.               .|+.++.+++++|++.+ +++||+ |+    ++      ...+|.++..+.      ..|
T Consensus        89 ~~a~~---------------~n~~~~~~l~~aa~~~g~v~~~v~-S~----~g------~~~~e~~~~~p~------~~y  136 (346)
T 3i6i_A           89 STVGG---------------ESILDQIALVKAMKAVGTIKRFLP-SE----FG------HDVNRADPVEPG------LNM  136 (346)
T ss_dssp             ECCCG---------------GGGGGHHHHHHHHHHHCCCSEEEC-SC----CS------SCTTTCCCCTTH------HHH
T ss_pred             ECCch---------------hhHHHHHHHHHHHHHcCCceEEee-cc----cC------CCCCccCcCCCc------chH
Confidence            99976               27889999999999999 999886 53    11      123444443332      579


Q ss_pred             hhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcc---cccccCcccHHHHHHHHHhh
Q 023689          165 PVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ---EYHWLGAVPVKDVAKAQVLL  241 (278)
Q Consensus       165 ~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~D~a~~~~~~  241 (278)
                      +.+|..+|++++    ++|++++++||+.++|........    .......+.....   ++..++++|++|+|++++.+
T Consensus       137 ~~sK~~~e~~l~----~~g~~~tivrpg~~~g~~~~~~~~----~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~  208 (346)
T 3i6i_A          137 YREKRRVRQLVE----ESGIPFTYICCNSIASWPYYNNIH----PSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKT  208 (346)
T ss_dssp             HHHHHHHHHHHH----HTTCCBEEEECCEESSCCCSCC---------CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH----HcCCCEEEEEecccccccCccccc----cccccCCCceEEEccCCCceEEecCHHHHHHHHHHH
Confidence            999999999886    579999999999999975433210    0000112222221   34689999999999999999


Q ss_pred             hcCCCCC-ceEEec--CccccHHHHHHHHHHhCCC
Q 023689          242 FESPAAS-GRYLCT--NGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       242 ~~~~~~~-~~~~~~--~~~~s~~e~~~~i~~~~~~  273 (278)
                      +.++... +.|++.  ++.+|+.|+++.+.+.++.
T Consensus       209 l~~~~~~~~~~~i~g~~~~~s~~e~~~~~~~~~g~  243 (346)
T 3i6i_A          209 VDDVRTLNKSVHFRPSCNCLNINELASVWEKKIGR  243 (346)
T ss_dssp             TTCGGGTTEEEECCCGGGEECHHHHHHHHHHHHTS
T ss_pred             HhCccccCeEEEEeCCCCCCCHHHHHHHHHHHHCC
Confidence            9987543 355443  5789999999999998853

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.97  E-value=1.5e-31  Score=211.58  Aligned_cols=205  Identities=16%  Similarity=0.128  Sum_probs=157.2

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCC-CeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      .+|+||||||||+||++++++|+++|+ .+|++++|++...         . .+++++.+|++|++++.+++  +|+|||
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~~---------~-~~~~~~~~D~~~~~~~~~~~--~d~vi~   71 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE---------H-PRLDNPVGPLAELLPQLDGS--IDTAFC   71 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC---------C-TTEECCBSCHHHHGGGCCSC--CSEEEE
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCccc---------C-CCceEEeccccCHHHHHHhh--hcEEEE
Confidence            357999999999999999999999996 3788888876541         1 17889999999999888888  999999


Q ss_pred             ecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhh
Q 023689           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPV  166 (278)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~  166 (278)
                      +|+....  ...+++..+++|+.++.+++++|++.++++||++||..++.. +                     .+.|+.
T Consensus        72 ~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~-~---------------------~~~y~~  127 (215)
T 2a35_A           72 CLGTTIK--EAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAK-S---------------------SIFYNR  127 (215)
T ss_dssp             CCCCCHH--HHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT-C---------------------SSHHHH
T ss_pred             Ceeeccc--cCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCCC-C---------------------ccHHHH
Confidence            9986442  124578889999999999999999999999999999655321 1                     157999


Q ss_pred             HHHHHHHHHHHHHHhcCCc-eEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHHHHHHHHHhhhcCC
Q 023689          167 SKTLAEKAAWEFAEKHGVD-VVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP  245 (278)
Q Consensus       167 sK~~~e~~~~~~~~~~~~~-~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  245 (278)
                      +|...|.+++    ..+++ ++++||+.+||+.....  ...    .+. +......+..++++|++|+|++++.++.++
T Consensus       128 sK~~~e~~~~----~~~~~~~~~vrp~~v~g~~~~~~--~~~----~~~-~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~  196 (215)
T 2a35_A          128 VKGELEQALQ----EQGWPQLTIARPSLLFGPREEFR--LAE----ILA-APIARILPGKYHGIEACDLARALWRLALEE  196 (215)
T ss_dssp             HHHHHHHHHT----TSCCSEEEEEECCSEESTTSCEE--GGG----GTT-CCCC----CHHHHHHHHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHH----HcCCCeEEEEeCceeeCCCCcch--HHH----HHH-HhhhhccCCCcCcEeHHHHHHHHHHHHhcC
Confidence            9999999886    46899 99999999999975422  111    111 111112223678999999999999999886


Q ss_pred             CCCceEEec-CccccH
Q 023689          246 AASGRYLCT-NGIYQF  260 (278)
Q Consensus       246 ~~~~~~~~~-~~~~s~  260 (278)
                      . .+.|+++ ++.+++
T Consensus       197 ~-~~~~~i~~~~~~~~  211 (215)
T 2a35_A          197 G-KGVRFVESDELRKL  211 (215)
T ss_dssp             C-SEEEEEEHHHHHHH
T ss_pred             C-CCceEEcHHHHHHh
Confidence            5 5677554 445544

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.97  E-value=1e-30  Score=214.86  Aligned_cols=239  Identities=14%  Similarity=0.144  Sum_probs=159.1

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cC---CCCCCCceEEEEccCCChhhHHHHhc
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-AL---PGAGDANLRVFEADVLDSGAVSRAVE   79 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~---~~~~~~~v~~~~~Dl~d~~~~~~~~~   79 (278)
                      |..+++|++|||||+|+||++++++|+++|+ .|++..|+.+..+... .+   .... .++.++.+|++|++++.++++
T Consensus         1 m~~~~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~   78 (278)
T 1spx_A            1 MTRFAEKVAIITGSSNGIGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVSE-QNVNSVVADVTTDAGQDEILS   78 (278)
T ss_dssp             -CTTTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCG-GGEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcccCC-CceeEEecccCCHHHHHHHHH
Confidence            3446678999999999999999999999999 8999888754332221 11   1111 278899999999999998887


Q ss_pred             -------CccEEEEecccCCCC----C----CCCchhhhhhhHHhHHHHHHHHHHhc----CCCEEEEecceee-eecCC
Q 023689           80 -------GCKGVFHVASPCTLE----D----PVDPEKELILPAVQGTLNVLEAAKRF----GVRRVVVTSSISA-IVPNP  139 (278)
Q Consensus        80 -------~~d~vi~~a~~~~~~----~----~~~~~~~~~~~n~~~~~~ll~~~~~~----~~~~~v~~Ss~~~-~~~~~  139 (278)
                             ++|+|||+||.....    .    ..++++..+++|+.++.++++++.+.    + ++||++||..+ +.+.+
T Consensus        79 ~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~  157 (278)
T 1spx_A           79 TTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATP  157 (278)
T ss_dssp             HHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCT
T ss_pred             HHHHHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccCCC
Confidence                   789999999975431    1    33457788999999999998887553    5 89999999766 44332


Q ss_pred             CCCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCC---chh---HHHH
Q 023689          140 GWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYL---NAS---CAVL  210 (278)
Q Consensus       140 ~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~---~~~---~~~~  210 (278)
                      .                    ...|+.+|...+.+.+.++.+   +|+++++++||.++++......   ...   ....
T Consensus       158 ~--------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~  217 (278)
T 1spx_A          158 D--------------------FPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTM  217 (278)
T ss_dssp             T--------------------SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHH
T ss_pred             C--------------------ccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHH
Confidence            2                    146999999999999888765   5999999999999998643210   000   0002


Q ss_pred             HHHhhCCCCcccccccCcccHHHHHHHHHhhhcCCC---CCce-EEec-CccccHHHHHHHHHHhC
Q 023689          211 QQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA---ASGR-YLCT-NGIYQFGDFAERVSKLF  271 (278)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~---~~~~-~~~~-~~~~s~~e~~~~i~~~~  271 (278)
                      .......|      ...+++++|+|+++++++..+.   ..|. +.+. +..+++.|+++.+.+.+
T Consensus       218 ~~~~~~~p------~~~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~~~~~~~~~~~~~  277 (278)
T 1spx_A          218 ATMKECVP------AGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSLIMGLHCQDFAKLL  277 (278)
T ss_dssp             HHHHHHCT------TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC------------
T ss_pred             HHHHhcCC------CcCCCCHHHHHHHHHHHcCccccCcccCcEEEECCCcccccCcccccHHHHh
Confidence            22222222      2457899999999999987543   3464 5444 55789999999887753

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.97  E-value=1.7e-29  Score=198.28  Aligned_cols=200  Identities=17%  Similarity=0.152  Sum_probs=150.4

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEecc
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a~   89 (278)
                      |+||||||||+||++++++|+++|+ +|++++|+++......      ..+++++.+|++|++++.++++++|+|||+|+
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~   76 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGY-EVTVLVRDSSRLPSEG------PRPAHVVVGDVLQAADVDKTVAGQDAVIVLLG   76 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCGGGSCSSS------CCCSEEEESCTTSHHHHHHHHTTCSEEEECCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeChhhccccc------CCceEEEEecCCCHHHHHHHHcCCCEEEECcc
Confidence            6899999999999999999999998 9999999765433221      12789999999999999999999999999998


Q ss_pred             cCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhhHHH
Q 023689           90 PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKT  169 (278)
Q Consensus        90 ~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~  169 (278)
                      ....    .   ...++|+.++.++++++++.++++||++||..++......         + .      +...|+.+|.
T Consensus        77 ~~~~----~---~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~~~---------~-~------~~~~y~~~K~  133 (206)
T 1hdo_A           77 TRND----L---SPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKV---------P-P------RLQAVTDDHI  133 (206)
T ss_dssp             CTTC----C---SCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCS---------C-G------GGHHHHHHHH
T ss_pred             CCCC----C---CccchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCcccc---------c-c------cchhHHHHHH
Confidence            7543    1   1235899999999999999999999999997554322110         0 0      1257999999


Q ss_pred             HHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHHHHHHHHHhhhcCCCCCc
Q 023689          170 LAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASG  249 (278)
Q Consensus       170 ~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~  249 (278)
                      ..|.+++    +.+++++++||+.+............       ..+.+      ..++++++|+|++++.+++++...|
T Consensus       134 ~~e~~~~----~~~i~~~~lrp~~~~~~~~~~~~~~~-------~~~~~------~~~~i~~~Dva~~~~~~~~~~~~~g  196 (206)
T 1hdo_A          134 RMHKVLR----ESGLKYVAVMPPHIGDQPLTGAYTVT-------LDGRG------PSRVISKHDLGHFMLRCLTTDEYDG  196 (206)
T ss_dssp             HHHHHHH----HTCSEEEEECCSEEECCCCCSCCEEE-------SSSCS------SCSEEEHHHHHHHHHHTTSCSTTTT
T ss_pred             HHHHHHH----hCCCCEEEEeCCcccCCCCCcceEec-------ccCCC------CCCccCHHHHHHHHHHHhcCccccc
Confidence            9999884    57999999999998422211111000       01111      1589999999999999998876555


Q ss_pred             -eEEecCc
Q 023689          250 -RYLCTNG  256 (278)
Q Consensus       250 -~~~~~~~  256 (278)
                       .|+++++
T Consensus       197 ~~~~i~~g  204 (206)
T 1hdo_A          197 HSTYPSHQ  204 (206)
T ss_dssp             CEEEEECC
T ss_pred             cceeeecc
Confidence             5665543

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.97  E-value=9.4e-30  Score=206.74  Aligned_cols=218  Identities=20%  Similarity=0.182  Sum_probs=156.9

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc----
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~----   79 (278)
                      |+.+++|++|||||+|+||++++++|.++|+ .|++..|+.+..+......  . .++.++++|++|++++.++++    
T Consensus         2 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~--~-~~~~~~~~Dv~~~~~v~~~~~~~~~   77 (257)
T 3tpc_A            2 VMQLKSRVFIVTGASSGLGAAVTRMLAQEGA-TVLGLDLKPPAGEEPAAEL--G-AAVRFRNADVTNEADATAALAFAKQ   77 (257)
T ss_dssp             --CCTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSCC---------------CEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHh--C-CceEEEEccCCCHHHHHHHHHHHHH
Confidence            3467789999999999999999999999999 8988988776544432211  1 278899999999999988876    


Q ss_pred             ---CccEEEEecccCCCC--------CCCCchhhhhhhHHhHHHHHHHHHHhc----------CCCEEEEecceeeeecC
Q 023689           80 ---GCKGVFHVASPCTLE--------DPVDPEKELILPAVQGTLNVLEAAKRF----------GVRRVVVTSSISAIVPN  138 (278)
Q Consensus        80 ---~~d~vi~~a~~~~~~--------~~~~~~~~~~~~n~~~~~~ll~~~~~~----------~~~~~v~~Ss~~~~~~~  138 (278)
                         ++|++||+||.....        ...+.++..+++|+.++.++++++.+.          +.++||++||..++.+.
T Consensus        78 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~  157 (257)
T 3tpc_A           78 EFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQ  157 (257)
T ss_dssp             HHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC
T ss_pred             HcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCC
Confidence               789999999976432        123567889999999999999988553          45689999998887665


Q ss_pred             CCCCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhh
Q 023689          139 PGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQ  215 (278)
Q Consensus       139 ~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~  215 (278)
                      +..                    ..|+.||.+.+.+.+.++.+   +|+++++++||.|.++......   .........
T Consensus       158 ~~~--------------------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~---~~~~~~~~~  214 (257)
T 3tpc_A          158 IGQ--------------------AAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMP---QDVQDALAA  214 (257)
T ss_dssp             TTC--------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC-----------------C
T ss_pred             CCC--------------------cchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCC---HHHHHHHHh
Confidence            432                    57999999999998888876   6999999999999998653321   111112222


Q ss_pred             CCCCcccccccCcccHHHHHHHHHhhhcCCCCCceEEe
Q 023689          216 GSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGRYLC  253 (278)
Q Consensus       216 ~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~  253 (278)
                      ..|.     ...+.+++|+|+++++++++....|..+.
T Consensus       215 ~~p~-----~~r~~~~~dva~~v~~l~s~~~itG~~i~  247 (257)
T 3tpc_A          215 SVPF-----PPRLGRAEEYAALVKHICENTMLNGEVIR  247 (257)
T ss_dssp             CSSS-----SCSCBCHHHHHHHHHHHHHCTTCCSCEEE
T ss_pred             cCCC-----CCCCCCHHHHHHHHHHHcccCCcCCcEEE
Confidence            2221     15688999999999999987556675433

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.97  E-value=3.6e-30  Score=213.79  Aligned_cols=222  Identities=16%  Similarity=0.147  Sum_probs=168.6

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCC-CCeEEEEecCCCCCc--ccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNN-YTSINATVFPGSDSS--HLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g-~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      +|+||||||||+||++++++|+++| + .|++++|++....  .+..      .+++++.+|++|++++.++++++|+||
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~-~V~~~~R~~~~~~~~~l~~------~~~~~~~~D~~d~~~l~~~~~~~d~vi   77 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTF-KVRVVTRNPRKKAAKELRL------QGAEVVQGDQDDQVIMELALNGAYATF   77 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSS-EEEEEESCTTSHHHHHHHH------TTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCc-eEEEEEcCCCCHHHHHHHH------CCCEEEEecCCCHHHHHHHHhcCCEEE
Confidence            4799999999999999999999998 8 9999999875431  1111      178899999999999999999999999


Q ss_pred             EecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhh
Q 023689           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYP  165 (278)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~  165 (278)
                      |+++....        ...+.|+.++.+++++|++.++++||+.|| .++++...        ..         ....|+
T Consensus        78 ~~a~~~~~--------~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~-~~~~~~~~--------~~---------~~~~y~  131 (299)
T 2wm3_A           78 IVTNYWES--------CSQEQEVKQGKLLADLARRLGLHYVVYSGL-ENIKKLTA--------GR---------LAAAHF  131 (299)
T ss_dssp             ECCCHHHH--------TCHHHHHHHHHHHHHHHHHHTCSEEEECCC-CCHHHHTT--------TS---------CCCHHH
T ss_pred             EeCCCCcc--------ccchHHHHHHHHHHHHHHHcCCCEEEEEcC-ccccccCC--------Cc---------ccCchh
Confidence            99875221        124578889999999999999999999766 33333111        00         125699


Q ss_pred             hHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCC----CcccccccCcccHHHHHHHHHhh
Q 023689          166 VSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSK----DTQEYHWLGAVPVKDVAKAQVLL  241 (278)
Q Consensus       166 ~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~D~a~~~~~~  241 (278)
                      .+|..+|++++    .+|++++++||+.+||+........      ....+..    ...++..++++|++|+|++++.+
T Consensus       132 ~sK~~~e~~~~----~~gi~~~ilrp~~~~~~~~~~~~~~------~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  201 (299)
T 2wm3_A          132 DGKGEVEEYFR----DIGVPMTSVRLPCYFENLLSHFLPQ------KAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSL  201 (299)
T ss_dssp             HHHHHHHHHHH----HHTCCEEEEECCEEGGGGGTTTCCE------ECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHH
T ss_pred             hHHHHHHHHHH----HCCCCEEEEeecHHhhhchhhcCCc------ccCCCCEEEEEecCCCCccceecHHHHHHHHHHH
Confidence            99999999886    4699999999999999754321110      0112211    11255778999999999999999


Q ss_pred             hcCCC--CCceEEecCccccHHHHHHHHHHhCCC
Q 023689          242 FESPA--ASGRYLCTNGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       242 ~~~~~--~~~~~~~~~~~~s~~e~~~~i~~~~~~  273 (278)
                      +.++.  .+..|+++++.+|+.|+++.+.+.++.
T Consensus       202 l~~~~~~~g~~~~~~g~~~s~~e~~~~~~~~~g~  235 (299)
T 2wm3_A          202 LKMPEKYVGQNIGLSTCRHTAEEYAALLTKHTRK  235 (299)
T ss_dssp             HHSHHHHTTCEEECCSEEECHHHHHHHHHHHHSS
T ss_pred             HcChhhhCCeEEEeeeccCCHHHHHHHHHHHHCC
Confidence            98742  234687777889999999999998853

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.97  E-value=2.2e-30  Score=210.19  Aligned_cols=225  Identities=17%  Similarity=0.178  Sum_probs=166.1

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      .+++|++|||||+|+||++++++|+++|+ .|+++.|+.+..+.+. .+..... ++.++.+|++|++++.++++     
T Consensus         8 ~~~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~   85 (255)
T 1fmc_A            8 RLDGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGG-QAFACRCDITSEQELSALADFAISK   85 (255)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhCC-ceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            46678999999999999999999999999 8999988764332221 1111111 78899999999999988876     


Q ss_pred             --CccEEEEecccCCCC---CCCCchhhhhhhHHhHHHHHHHHHH----hcCCCEEEEecceeeeecCCCCCCccccCCC
Q 023689           80 --GCKGVFHVASPCTLE---DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (278)
Q Consensus        80 --~~d~vi~~a~~~~~~---~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~  150 (278)
                        ++|+|||+||.....   ...++++..+++|+.++.++++++.    +.+.++||++||..++.+.+.          
T Consensus        86 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----------  155 (255)
T 1fmc_A           86 LGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNIN----------  155 (255)
T ss_dssp             HSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTT----------
T ss_pred             cCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCC----------
Confidence              799999999975542   2234567889999999999888874    456789999999776543322          


Q ss_pred             CCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccC
Q 023689          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (278)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (278)
                                ...|+.+|.+.+.+.+.++.+.   +++++++|||.++|+.....  ...........+.|      ...
T Consensus       156 ----------~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~------~~~  217 (255)
T 1fmc_A          156 ----------MTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSV--ITPEIEQKMLQHTP------IRR  217 (255)
T ss_dssp             ----------CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT--CCHHHHHHHHHTCS------SCS
T ss_pred             ----------CcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhc--cChHHHHHHHhcCC------ccc
Confidence                      2579999999999999888664   89999999999999854322  12233344444444      346


Q ss_pred             cccHHHHHHHHHhhhcCCC--CCc-eEEec-CccccH
Q 023689          228 AVPVKDVAKAQVLLFESPA--ASG-RYLCT-NGIYQF  260 (278)
Q Consensus       228 ~i~~~D~a~~~~~~~~~~~--~~~-~~~~~-~~~~s~  260 (278)
                      +++++|+|+++++++....  ..| .|+++ +..+|+
T Consensus       218 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~s~  254 (255)
T 1fmc_A          218 LGQPQDIANAALFLCSPAASWVSGQILTVSGGGVQEL  254 (255)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCCCC
T ss_pred             CCCHHHHHHHHHHHhCCccccCCCcEEEECCceeccC
Confidence            7899999999999987543  235 56554 445553

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.97  E-value=7e-30  Score=216.46  Aligned_cols=221  Identities=16%  Similarity=0.122  Sum_probs=164.9

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCC--cccccCCCCCCCceEEEEcc-CCChhhHHHHhcCccEEE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS--SHLFALPGAGDANLRVFEAD-VLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~--~~~~~~~~~~~~~v~~~~~D-l~d~~~~~~~~~~~d~vi   85 (278)
                      +|+|||||||||||++|+++|+++|+ +|++++|+++..  ..+...     .+++++.+| ++|++++.++++++|+||
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~l~~~-----~~v~~v~~D~l~d~~~l~~~~~~~d~Vi   78 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVGH-HVRAQVHSLKGLIAEELQAI-----PNVTLFQGPLLNNVPLMDTLFEGAHLAF   78 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCSCSHHHHHHHTS-----TTEEEEESCCTTCHHHHHHHHTTCSEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECCCChhhHHHHhhc-----CCcEEEECCccCCHHHHHHHHhcCCEEE
Confidence            57899999999999999999999999 899999977643  122111     178899999 999999999999999999


Q ss_pred             EecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcC-CCEEEEecceee-eecCCCCCCccccCCCCCchhhhhccCch
Q 023689           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRRVVVTSSISA-IVPNPGWKGKVFDETSWTDLEYCKSRKKW  163 (278)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~v~~Ss~~~-~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  163 (278)
                      |+++...           ...|..+ .+++++|++.+ +++||++||.+. .++.                    .+...
T Consensus        79 ~~a~~~~-----------~~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~~~~~--------------------~~~~~  126 (352)
T 1xgk_A           79 INTTSQA-----------GDEIAIG-KDLADAAKRAGTIQHYIYSSMPDHSLYGP--------------------WPAVP  126 (352)
T ss_dssp             ECCCSTT-----------SCHHHHH-HHHHHHHHHHSCCSEEEEEECCCGGGTSS--------------------CCCCT
T ss_pred             EcCCCCC-----------cHHHHHH-HHHHHHHHHcCCccEEEEeCCccccccCC--------------------CCCcc
Confidence            9986421           1346766 99999999998 999999998652 2211                    11156


Q ss_pred             hhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCC----CcccccccCcccH-HHHHHHH
Q 023689          164 YPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSK----DTQEYHWLGAVPV-KDVAKAQ  238 (278)
Q Consensus       164 y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~-~D~a~~~  238 (278)
                      |+.+|..+|++++    ..+++++++||+ +||+........... ......+..    +..+++.++++|+ +|+|+++
T Consensus       127 y~~sK~~~E~~~~----~~gi~~~ivrpg-~~g~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai  200 (352)
T 1xgk_A          127 MWAPKFTVENYVR----QLGLPSTFVYAG-IYNNNFTSLPYPLFQ-MELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPAL  200 (352)
T ss_dssp             TTHHHHHHHHHHH----TSSSCEEEEEEC-EEGGGCBSSSCSSCB-EEECTTSCEEEEESSCTTSCEEEECHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH----HcCCCEEEEecc-eecCCchhccccccc-ccccCCCceEEeeccCCCCceeeEecHHHHHHHH
Confidence            9999999999986    459999999976 688764322100000 000012322    1114578899999 8999999


Q ss_pred             HhhhcCCC---CCceEEecCccccHHHHHHHHHHhCCC
Q 023689          239 VLLFESPA---ASGRYLCTNGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       239 ~~~~~~~~---~~~~~~~~~~~~s~~e~~~~i~~~~~~  273 (278)
                      +.++.++.   .+++|+++++.+|+.|+++.+.+.++.
T Consensus       201 ~~~l~~~~~~~~g~~~~l~~~~~s~~e~~~~i~~~~G~  238 (352)
T 1xgk_A          201 LQIFKDGPQKWNGHRIALTFETLSPVQVCAAFSRALNR  238 (352)
T ss_dssp             HHHHHHCHHHHTTCEEEECSEEECHHHHHHHHHHHHTS
T ss_pred             HHHHhCCchhhCCeEEEEecCCCCHHHHHHHHHHHHCC
Confidence            99998752   345788878889999999999998753

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.97  E-value=1.2e-29  Score=204.99  Aligned_cols=222  Identities=16%  Similarity=0.134  Sum_probs=168.2

Q ss_pred             CccccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc-
Q 023689            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-   79 (278)
Q Consensus         1 m~~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-   79 (278)
                      |..|+.+++|++|||||+|+||++++++|+++|+ .|++..|+.+..+.+....  . ....++++|++|+++++++++ 
T Consensus         1 M~~~~~l~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~--~-~~~~~~~~Dv~d~~~v~~~~~~   76 (248)
T 3op4_A            1 MSQFMNLEGKVALVTGASRGIGKAIAELLAERGA-KVIGTATSESGAQAISDYL--G-DNGKGMALNVTNPESIEAVLKA   76 (248)
T ss_dssp             -CCTTCCTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHH--G-GGEEEEECCTTCHHHHHHHHHH
T ss_pred             CccccCCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh--c-ccceEEEEeCCCHHHHHHHHHH
Confidence            6777788899999999999999999999999999 8988888765433322111  1 167889999999999988876 


Q ss_pred             ------CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHh----cCCCEEEEecceeeeecCCCCCCcc
Q 023689           80 ------GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKV  145 (278)
Q Consensus        80 ------~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~  145 (278)
                            ++|++||+||.....    ...++++..+++|+.++.++++++.+    ++.++||++||..+..+.++.    
T Consensus        77 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~----  152 (248)
T 3op4_A           77 ITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQ----  152 (248)
T ss_dssp             HHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTC----
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCC----
Confidence                  689999999976542    23456788999999999999888743    566899999998887665442    


Q ss_pred             ccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccc
Q 023689          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQE  222 (278)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (278)
                                      ..|+.+|.+.+.+.+.++.+   +|+++++++||.+.++......   ...........|    
T Consensus       153 ----------------~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~---~~~~~~~~~~~p----  209 (248)
T 3op4_A          153 ----------------ANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALN---DEQRTATLAQVP----  209 (248)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSC---HHHHHHHHHTCT----
T ss_pred             ----------------hHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcC---HHHHHHHHhcCC----
Confidence                            57999999999888888865   4899999999999998754431   222233333333    


Q ss_pred             ccccCcccHHHHHHHHHhhhcCCCC--CceE-EecC
Q 023689          223 YHWLGAVPVKDVAKAQVLLFESPAA--SGRY-LCTN  255 (278)
Q Consensus       223 ~~~~~~i~~~D~a~~~~~~~~~~~~--~~~~-~~~~  255 (278)
                        ...+.+++|+|+++++++.....  .|.. .+.+
T Consensus       210 --~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdg  243 (248)
T 3op4_A          210 --AGRLGDPREIASAVAFLASPEAAYITGETLHVNG  243 (248)
T ss_dssp             --TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             --CCCCcCHHHHHHHHHHHcCCccCCccCcEEEECC
Confidence              35678999999999999865432  4654 4443

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.97  E-value=6.1e-30  Score=206.29  Aligned_cols=209  Identities=20%  Similarity=0.143  Sum_probs=157.9

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc---Ccc
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---GCK   82 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---~~d   82 (278)
                      .+++|++|||||+|+||++++++|+++|+ +|+++.|+.+..+.+....   . +++++.+|++|++++.++++   ++|
T Consensus         4 ~~~~~~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~---~-~~~~~~~D~~~~~~~~~~~~~~~~id   78 (244)
T 1cyd_A            4 NFSGLRALVTGAGKGIGRDTVKALHASGA-KVVAVTRTNSDLVSLAKEC---P-GIEPVCVDLGDWDATEKALGGIGPVD   78 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHS---T-TCEEEECCTTCHHHHHHHHTTCCCCS
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhc---c-CCCcEEecCCCHHHHHHHHHHcCCCC
Confidence            45678999999999999999999999999 8999988764433222110   1 56778999999999999987   479


Q ss_pred             EEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHHHhc----C-CCEEEEecceeeeecCCCCCCccccCCCCCc
Q 023689           83 GVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKRF----G-VRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (278)
Q Consensus        83 ~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~----~-~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~  153 (278)
                      +|||+||....    +...+.++..+++|+.++.++++++.+.    + .++||++||..++.+.+.             
T Consensus        79 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-------------  145 (244)
T 1cyd_A           79 LLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPN-------------  145 (244)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTT-------------
T ss_pred             EEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCC-------------
Confidence            99999996543    1223466789999999999888877543    5 679999999776544322             


Q ss_pred             hhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCccc
Q 023689          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP  230 (278)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  230 (278)
                             ...|+.+|.+.+.+.+.++++   .+++++++||+.++|+...... ....++..+..+.+      .+++++
T Consensus       146 -------~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~-~~~~~~~~~~~~~~------~~~~~~  211 (244)
T 1cyd_A          146 -------LITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVS-ADPEFARKLKERHP------LRKFAE  211 (244)
T ss_dssp             -------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHT-CCHHHHHHHHHHST------TSSCBC
T ss_pred             -------cchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccc-cCHHHHHHHHhcCC------ccCCCC
Confidence                   157999999999999998876   5899999999999998532110 11233344444333      468999


Q ss_pred             HHHHHHHHHhhhcCCC
Q 023689          231 VKDVAKAQVLLFESPA  246 (278)
Q Consensus       231 ~~D~a~~~~~~~~~~~  246 (278)
                      ++|+|++++.++.++.
T Consensus       212 ~~dva~~~~~l~~~~~  227 (244)
T 1cyd_A          212 VEDVVNSILFLLSDRS  227 (244)
T ss_dssp             HHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHhCchh
Confidence            9999999999987643

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.97  E-value=1.1e-29  Score=206.77  Aligned_cols=223  Identities=19%  Similarity=0.162  Sum_probs=167.0

Q ss_pred             cccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc--
Q 023689            3 SEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE--   79 (278)
Q Consensus         3 ~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--   79 (278)
                      +|..+++|++|||||+|+||++++++|.++|+ .|++..|+.+..+... .+......++.++++|++|+++++++++  
T Consensus         4 ~m~~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   82 (262)
T 3pk0_A            4 SMFDLQGRSVVVTGGTKGIGRGIATVFARAGA-NVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRA   82 (262)
T ss_dssp             CTTCCTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CccCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHH
Confidence            57778899999999999999999999999999 8988888765433221 1211121278999999999999888876  


Q ss_pred             -----CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHhc----CCCEEEEecceeee-ecCCCCCCcc
Q 023689           80 -----GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF----GVRRVVVTSSISAI-VPNPGWKGKV  145 (278)
Q Consensus        80 -----~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~----~~~~~v~~Ss~~~~-~~~~~~~~~~  145 (278)
                           ++|++||+||.....    ...+.++..+++|+.++.++++++.+.    +.+++|++||..+. .+.+.     
T Consensus        83 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~-----  157 (262)
T 3pk0_A           83 VEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPG-----  157 (262)
T ss_dssp             HHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCCTT-----
T ss_pred             HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCC-----
Confidence                 789999999975532    233567788999999999988877543    67899999997764 33222     


Q ss_pred             ccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccc
Q 023689          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQE  222 (278)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (278)
                                     ...|+.+|...+.+.+.++.+   +|+++++++||.|+++.....   .......+....|    
T Consensus       158 ---------------~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~---~~~~~~~~~~~~p----  215 (262)
T 3pk0_A          158 ---------------WSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLEN---GEEYIASMARSIP----  215 (262)
T ss_dssp             ---------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTT---CHHHHHHHHTTST----
T ss_pred             ---------------ChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCcccccc---CHHHHHHHHhcCC----
Confidence                           157999999999999998876   699999999999999854322   1233344444433    


Q ss_pred             ccccCcccHHHHHHHHHhhhcCCC--CCce-EEecC
Q 023689          223 YHWLGAVPVKDVAKAQVLLFESPA--ASGR-YLCTN  255 (278)
Q Consensus       223 ~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~  255 (278)
                        ...+.+++|+|+++++++....  ..|. +.+.+
T Consensus       216 --~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdG  249 (262)
T 3pk0_A          216 --AGALGTPEDIGHLAAFLATKEAGYITGQAIAVDG  249 (262)
T ss_dssp             --TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             --CCCCcCHHHHHHHHHHHhCccccCCcCCEEEECC
Confidence              3457899999999999986543  3464 44443

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.97  E-value=6.2e-30  Score=208.03  Aligned_cols=225  Identities=16%  Similarity=0.150  Sum_probs=163.7

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc----
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~----   79 (278)
                      |..+++|++|||||+|+||++++++|+++|+ .|++..|+.+..+......  . .++.++++|++|++++.++++    
T Consensus         3 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~--~-~~~~~~~~D~~~~~~v~~~~~~~~~   78 (259)
T 4e6p_A            3 MKRLEGKSALITGSARGIGRAFAEAYVREGA-TVAIADIDIERARQAAAEI--G-PAAYAVQMDVTRQDSIDAAIAATVE   78 (259)
T ss_dssp             -CTTTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH--C-TTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh--C-CCceEEEeeCCCHHHHHHHHHHHHH
Confidence            4567889999999999999999999999999 8888888765433322111  1 178899999999999988876    


Q ss_pred             ---CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHHHhc----C-CCEEEEecceeeeecCCCCCCcccc
Q 023689           80 ---GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKRF----G-VRRVVVTSSISAIVPNPGWKGKVFD  147 (278)
Q Consensus        80 ---~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~----~-~~~~v~~Ss~~~~~~~~~~~~~~~~  147 (278)
                         ++|+|||+||....    +...++++..+++|+.++.++++++.+.    + .+++|++||..++.+.+..      
T Consensus        79 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~------  152 (259)
T 4e6p_A           79 HAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALV------  152 (259)
T ss_dssp             HSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTB------
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCCC------
Confidence               78999999997543    2234567888999999999999887443    2 4689999998876654432      


Q ss_pred             CCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcc---
Q 023689          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ---  221 (278)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~---  221 (278)
                                    ..|+.+|...+.+.+.++.+.   |+++++++||.++|+.....    ...+...........   
T Consensus       153 --------------~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~----~~~~~~~~~~~~~~~~~~  214 (259)
T 4e6p_A          153 --------------AIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGV----DALFARYENRPRGEKKRL  214 (259)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHH----HHHHHHHHTCCTTHHHHH
T ss_pred             --------------hHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhh----hhhhhhhccCChHHHHHH
Confidence                          579999999999999988754   89999999999999863321    111111111100000   


Q ss_pred             ---cccccCcccHHHHHHHHHhhhcCCC--CCc-eEEecCc
Q 023689          222 ---EYHWLGAVPVKDVAKAQVLLFESPA--ASG-RYLCTNG  256 (278)
Q Consensus       222 ---~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  256 (278)
                         ......+.+++|+|+++++++....  ..| .+++.++
T Consensus       215 ~~~~~p~~r~~~~~dva~~v~~L~s~~~~~itG~~i~vdgG  255 (259)
T 4e6p_A          215 VGEAVPFGRMGTAEDLTGMAIFLASAESDYIVSQTYNVDGG  255 (259)
T ss_dssp             HHHHSTTSSCBCTHHHHHHHHHTTSGGGTTCCSCEEEESTT
T ss_pred             HhccCCCCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECcC
Confidence               1135778999999999999886543  235 4555443

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.96  E-value=1.2e-29  Score=203.58  Aligned_cols=229  Identities=20%  Similarity=0.133  Sum_probs=163.0

Q ss_pred             cccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc----
Q 023689            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (278)
Q Consensus         5 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~----   79 (278)
                      +++++|++|||||+++||+++++.|.++|+ .|++..|+.+..+... ++...+. ++.++++|++|+++++++++    
T Consensus         3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga-~Vv~~~~~~~~~~~~~~~i~~~g~-~~~~~~~Dvt~~~~v~~~~~~~~~   80 (254)
T 4fn4_A            3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDS-IVVAVELLEDRLNQIVQELRGMGK-EVLGVKADVSKKKDVEEFVRRTFE   80 (254)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHH
Confidence            468899999999999999999999999999 8888888765543332 2222222 78999999999999888875    


Q ss_pred             ---CccEEEEecccCCC-----CCCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCcccc
Q 023689           80 ---GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFD  147 (278)
Q Consensus        80 ---~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~  147 (278)
                         ++|++|||||....     +...++|+..+++|+.++..+.+++    ++++-+++|++||.++..+.++.      
T Consensus        81 ~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~~~------  154 (254)
T 4fn4_A           81 TYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAG------  154 (254)
T ss_dssp             HHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSSSC------
T ss_pred             HcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCCCC------
Confidence               57999999996432     2344578999999998888777665    55567899999998887665543      


Q ss_pred             CCCCCchhhhhccCchhhhHHHHHHHHHHHHHH---hcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccc
Q 023689          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (278)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (278)
                                    ..|+.+|.....+.+.++.   ++||++++|.||.|-++.............+......++     
T Consensus       155 --------------~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~-----  215 (254)
T 4fn4_A          155 --------------APYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSL-----  215 (254)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTT-----
T ss_pred             --------------hHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCC-----
Confidence                          3466666666555555554   469999999999999986543322222222222221111     


Q ss_pred             ccCcccHHHHHHHHHhhhcCCC--CCceEEecCccccH
Q 023689          225 WLGAVPVKDVAKAQVLLFESPA--ASGRYLCTNGIYQF  260 (278)
Q Consensus       225 ~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~~~~s~  260 (278)
                      ...+..++|+|++++++.....  -.|+.+..++.+|+
T Consensus       216 ~~R~g~pediA~~v~fLaSd~a~~iTG~~i~VDGG~t~  253 (254)
T 4fn4_A          216 SSRLAEPEDIANVIVFLASDEASFVNGDAVVVDGGLTV  253 (254)
T ss_dssp             CCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCCcCHHHHHHHHHHHhCchhcCCcCCEEEeCCCccc
Confidence            2346789999999999986543  35766666665553

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.96  E-value=9.7e-29  Score=202.21  Aligned_cols=219  Identities=20%  Similarity=0.151  Sum_probs=167.3

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc------
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~------   79 (278)
                      .+++|++|||||+|+||++++++|+++|+ .|++..|+.+..+......  . .++.++.+|++|++++.++++      
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~--~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (271)
T 3tzq_B            8 ELENKVAIITGACGGIGLETSRVLARAGA-RVVLADLPETDLAGAAASV--G-RGAVHHVVDLTNEVSVRALIDFTIDTF   83 (271)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSCHHHHHHHH--C-TTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHh--C-CCeEEEECCCCCHHHHHHHHHHHHHHc
Confidence            56789999999999999999999999999 8988998876544332111  1 178899999999999988876      


Q ss_pred             -CccEEEEecccCCC------CCCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccC
Q 023689           80 -GCKGVFHVASPCTL------EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (278)
Q Consensus        80 -~~d~vi~~a~~~~~------~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E  148 (278)
                       ++|++||+||....      +...+.++..+++|+.++.++++++    ++++.++||++||..++.+.+..       
T Consensus        84 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~-------  156 (271)
T 3tzq_B           84 GRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMS-------  156 (271)
T ss_dssp             SCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCSSC-------
T ss_pred             CCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCCCC-------
Confidence             78999999997632      2234567889999999999999988    66677899999998876554332       


Q ss_pred             CCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccc
Q 023689          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (278)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (278)
                                   ..|+.+|.+.+.+.+.++.+   +|+++++++||.++++......  ............+      .
T Consensus       157 -------------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~------~  215 (271)
T 3tzq_B          157 -------------TAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGL--PQPIVDIFATHHL------A  215 (271)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC-----CHHHHHHHHTTST------T
T ss_pred             -------------hHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccC--CHHHHHHHHhcCC------C
Confidence                         57999999999999998876   6999999999999999755321  2233333333333      3


Q ss_pred             cCcccHHHHHHHHHhhhcCCC--CCce-EEecCc
Q 023689          226 LGAVPVKDVAKAQVLLFESPA--ASGR-YLCTNG  256 (278)
Q Consensus       226 ~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  256 (278)
                      ..+.+++|+|+++++++....  ..|. +.+.++
T Consensus       216 ~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG  249 (271)
T 3tzq_B          216 GRIGEPHEIAELVCFLASDRAAFITGQVIAADSG  249 (271)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCcCHHHHHHHHHHHhCcccCCcCCCEEEECCC
Confidence            457899999999999987643  3464 455544

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.96  E-value=1.1e-29  Score=211.19  Aligned_cols=239  Identities=13%  Similarity=0.018  Sum_probs=168.9

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      .+++|++|||||+|+||++++++|+++|+ .|+++.|+.+...... .+......++.++.+|++|++++.++++     
T Consensus        23 ~l~~k~vlITGasggiG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  101 (302)
T 1w6u_A           23 SFQGKVAFITGGGTGLGKGMTTLLSSLGA-QCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV  101 (302)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence            45678999999999999999999999999 8999988764332211 1100001178999999999999888876     


Q ss_pred             --CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHHHh-----cCCCEEEEecceeeeecCCCCCCccccC
Q 023689           80 --GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKR-----FGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (278)
Q Consensus        80 --~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~-----~~~~~~v~~Ss~~~~~~~~~~~~~~~~E  148 (278)
                        ++|+|||+||....    ....++++..+++|+.++.++++++.+     .+.++||++||..+..+.+.        
T Consensus       102 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------  173 (302)
T 1w6u_A          102 AGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGF--------  173 (302)
T ss_dssp             TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTT--------
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCCC--------
Confidence              45999999996543    223346788999999999999887743     34579999999777654332        


Q ss_pred             CCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccc
Q 023689          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (278)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (278)
                                  ...|+.+|.+.+.+.+.++.+   +|++++++|||.++++..................+.|      .
T Consensus       174 ------------~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p------~  235 (302)
T 1w6u_A          174 ------------VVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIP------C  235 (302)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCT------T
T ss_pred             ------------cchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCC------c
Confidence                        157999999999999998877   6999999999999998422111000011122333332      3


Q ss_pred             cCcccHHHHHHHHHhhhcCCCC--Cc-eEEec-CccccHHHHHHHHHHhC
Q 023689          226 LGAVPVKDVAKAQVLLFESPAA--SG-RYLCT-NGIYQFGDFAERVSKLF  271 (278)
Q Consensus       226 ~~~i~~~D~a~~~~~~~~~~~~--~~-~~~~~-~~~~s~~e~~~~i~~~~  271 (278)
                      ..+++++|+|+++++++.....  .| .+++. +..+++.++++.+.+..
T Consensus       236 ~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~~~~~~~~~  285 (302)
T 1w6u_A          236 GRLGTVEELANLAAFLCSDYASWINGAVIKFDGGEEVLISGEFNDLRKVT  285 (302)
T ss_dssp             SSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTHHHHHHSTTGGGGGCC
T ss_pred             CCCCCHHHHHHHHHHHcCCcccccCCCEEEECCCeeeccCCccccchhhc
Confidence            4578999999999999875432  45 45554 45678788777666544

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.96  E-value=1.7e-29  Score=206.71  Aligned_cols=224  Identities=15%  Similarity=0.093  Sum_probs=164.6

Q ss_pred             cccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc---
Q 023689            3 SEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---   79 (278)
Q Consensus         3 ~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---   79 (278)
                      .+..+++|++|||||+|+||++++++|+++|+ .|++..|+....+....+..... ++.++.+|++|++++.++.+   
T Consensus        25 ~~~~l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~  102 (273)
T 3uf0_A           25 GPFSLAGRTAVVTGAGSGIGRAIAHGYARAGA-HVLAWGRTDGVKEVADEIADGGG-SAEAVVADLADLEGAANVAEELA  102 (273)
T ss_dssp             CTTCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTHHHHHHHHHHTTTC-EEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHH
Confidence            34467789999999999999999999999999 88888865432222222222222 78999999999998887754   


Q ss_pred             ---CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccC
Q 023689           80 ---GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (278)
Q Consensus        80 ---~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E  148 (278)
                         ++|++||+||.....    ...++++..+++|+.++.++++++    ++++.++||++||..++.+.+..       
T Consensus       103 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~-------  175 (273)
T 3uf0_A          103 ATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNV-------  175 (273)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSC-------
T ss_pred             hcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCCCC-------
Confidence               689999999976542    234567889999999999988877    44567899999998876554432       


Q ss_pred             CCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccc
Q 023689          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (278)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (278)
                                   ..|+.+|.+.+.+.+.++.+   +|+++++++||.|.++...... .............|      .
T Consensus       176 -------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~p------~  235 (273)
T 3uf0_A          176 -------------AAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALR-ADDERAAEITARIP------A  235 (273)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHH-TSHHHHHHHHHHST------T
T ss_pred             -------------hhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcc-cCHHHHHHHHhcCC------C
Confidence                         57999999999999988876   6999999999999998643210 01222233333333      3


Q ss_pred             cCcccHHHHHHHHHhhhcCCC--CCceE-EecC
Q 023689          226 LGAVPVKDVAKAQVLLFESPA--ASGRY-LCTN  255 (278)
Q Consensus       226 ~~~i~~~D~a~~~~~~~~~~~--~~~~~-~~~~  255 (278)
                      ..+.+++|+|+++++++....  ..|.. .+.+
T Consensus       236 ~r~~~pedva~~v~~L~s~~a~~itG~~i~vdG  268 (273)
T 3uf0_A          236 GRWATPEDMVGPAVFLASDAASYVHGQVLAVDG  268 (273)
T ss_dssp             SSCBCGGGGHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCCCHHHHHHHHHHHhCchhcCCcCCEEEECc
Confidence            567899999999999987543  34654 4443

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.96  E-value=4.5e-29  Score=205.33  Aligned_cols=227  Identities=19%  Similarity=0.166  Sum_probs=163.1

Q ss_pred             cccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCC---------cccc----cCCCCCCCceEEEEccCC
Q 023689            3 SEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS---------SHLF----ALPGAGDANLRVFEADVL   69 (278)
Q Consensus         3 ~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~---------~~~~----~~~~~~~~~v~~~~~Dl~   69 (278)
                      .|..+++|++|||||+|+||++++++|+++|+ .|++..|++...         +.+.    .+.... .++.++++|++
T Consensus         4 ~m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~   81 (281)
T 3s55_A            4 SMADFEGKTALITGGARGMGRSHAVALAEAGA-DIAICDRCENSDVVGYPLATADDLAETVALVEKTG-RRCISAKVDVK   81 (281)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTT-CCEEEEECCTT
T ss_pred             cccccCCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCccccccccccccHHHHHHHHHHHHhcC-CeEEEEeCCCC
Confidence            57788899999999999999999999999999 888888864321         1111    011111 27899999999


Q ss_pred             ChhhHHHHhc-------CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceee
Q 023689           70 DSGAVSRAVE-------GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISA  134 (278)
Q Consensus        70 d~~~~~~~~~-------~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~  134 (278)
                      |+++++++++       ++|++||+||....    +...++++..+++|+.++.++++++    ++++.++||++||..+
T Consensus        82 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~  161 (281)
T 3s55_A           82 DRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLG  161 (281)
T ss_dssp             CHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhh
Confidence            9999888876       68999999997653    2234567889999999999999886    4456689999999887


Q ss_pred             eecCCCCCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCc---h---
Q 023689          135 IVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN---A---  205 (278)
Q Consensus       135 ~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~---~---  205 (278)
                      +.+.+..                    ..|+.+|...+.+.+.++.+   +|+++++++||.|+++.......   .   
T Consensus       162 ~~~~~~~--------------------~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~  221 (281)
T 3s55_A          162 HSANFAQ--------------------ASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPD  221 (281)
T ss_dssp             GSCCTTC--------------------HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC----
T ss_pred             cCCCCCC--------------------chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhcccccc
Confidence            6554332                    57999999999999998875   58999999999999997543100   0   


Q ss_pred             ----hHHHHHHHhhCCCCcccccccCcccHHHHHHHHHhhhcCCCC--Cce-EEecC
Q 023689          206 ----SCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAA--SGR-YLCTN  255 (278)
Q Consensus       206 ----~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~~-~~~~~  255 (278)
                          ...-.......    .......+.+++|+|+++++++.....  .|. +.+.+
T Consensus       222 ~~~~~~~~~~~~~~~----~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdg  274 (281)
T 3s55_A          222 LEKPTLKDVESVFAS----LHLQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDA  274 (281)
T ss_dssp             ---CCHHHHHHHHHH----HCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             ccccchhHHHHHHHh----hhccCcCCCCHHHHHHHHHHHcCCcccCCCCCEEEECC
Confidence                00000000000    011236789999999999999876443  464 44443

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.96  E-value=8.3e-30  Score=209.72  Aligned_cols=240  Identities=22%  Similarity=0.207  Sum_probs=174.5

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCC--CCCCceEEEEccCCChhhHHHHhc---
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPG--AGDANLRVFEADVLDSGAVSRAVE---   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~--~~~~~v~~~~~Dl~d~~~~~~~~~---   79 (278)
                      .+++|++|||||+|+||++++++|+++|+ .|++..|+.+..+... .+..  ....++.++.+|++|++++.++++   
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   86 (281)
T 3svt_A            8 SFQDRTYLVTGGGSGIGKGVAAGLVAAGA-SVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVT   86 (281)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CcCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence            56789999999999999999999999999 8888888765432221 1111  111268899999999999888876   


Q ss_pred             ----CccEEEEecccCCC-----CCCCCchhhhhhhHHhHHHHHHHHHHh----cCCCEEEEecceeeeecCCCCCCccc
Q 023689           80 ----GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVF  146 (278)
Q Consensus        80 ----~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~  146 (278)
                          ++|++||+||....     +...++++..+++|+.++.++++++.+    .+.++||++||..++.+.+..     
T Consensus        87 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----  161 (281)
T 3svt_A           87 AWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWF-----  161 (281)
T ss_dssp             HHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTC-----
T ss_pred             HHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCCCC-----
Confidence                57999999997322     223356788999999999999887744    445699999998886654432     


Q ss_pred             cCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccc
Q 023689          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (278)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (278)
                                     ..|+.||.+.+.+.+.++.+.   |+++++++||.+.++...... .............|     
T Consensus       162 ---------------~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~p-----  220 (281)
T 3svt_A          162 ---------------GAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAIT-ESAELSSDYAMCTP-----  220 (281)
T ss_dssp             ---------------THHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHH-TCHHHHHHHHHHCS-----
T ss_pred             ---------------hhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcc-cCHHHHHHHHhcCC-----
Confidence                           579999999999999988754   699999999999998643210 01122233333333     


Q ss_pred             cccCcccHHHHHHHHHhhhcCCCC--Cce-EEec-Ccccc-HHHHHHHHHHhCCC
Q 023689          224 HWLGAVPVKDVAKAQVLLFESPAA--SGR-YLCT-NGIYQ-FGDFAERVSKLFPE  273 (278)
Q Consensus       224 ~~~~~i~~~D~a~~~~~~~~~~~~--~~~-~~~~-~~~~s-~~e~~~~i~~~~~~  273 (278)
                       ...+.+++|+|+++++++.....  .|. +.+. +...+ ..++.+.+.+.++.
T Consensus       221 -~~r~~~~~dva~~~~~l~s~~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~  274 (281)
T 3svt_A          221 -LPRQGEVEDVANMAMFLLSDAASFVTGQVINVDGGQMLRRGPDFSAMLEPVFGR  274 (281)
T ss_dssp             -SSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGSCCCCCHHHHHHHHCT
T ss_pred             -CCCCCCHHHHHHHHHHHhCcccCCCCCCEEEeCCChhcccCCcchhccccccCC
Confidence             35678999999999999876432  464 5554 33444 66788888777654

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.96  E-value=4.3e-29  Score=202.79  Aligned_cols=222  Identities=15%  Similarity=0.090  Sum_probs=161.0

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      .+++|++|||||+|+||++++++|.++|+ .|++..|+.+..+... .+.... .++.++++|++|+++++++++     
T Consensus         3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (257)
T 3imf_A            3 AMKEKVVIITGGSSGMGKGMATRFAKEGA-RVVITGRTKEKLEEAKLEIEQFP-GQILTVQMDVRNTDDIQKMIEQIDEK   80 (257)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCST-TCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            45679999999999999999999999999 8988888765443332 222222 278999999999999888876     


Q ss_pred             --CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHH-----HhcCCCEEEEecceeeeecCCCCCCccccC
Q 023689           80 --GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA-----KRFGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (278)
Q Consensus        80 --~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~-----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E  148 (278)
                        ++|++|||||....    +...++++..+++|+.++.++++++     ++.+.+++|++||..++.+.+..       
T Consensus        81 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------  153 (257)
T 3imf_A           81 FGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGV-------  153 (257)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTTC-------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCCc-------
Confidence              68999999996543    2234567889999999999999887     33446799999998876554432       


Q ss_pred             CCCCchhhhhccCchhhhHHHHHHHHHHHHHH----hcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccc
Q 023689          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAE----KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (278)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~----~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (278)
                                   ..|+.+|...+.+.+.++.    ++|+++++++||.|.++....................|      
T Consensus       154 -------------~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p------  214 (257)
T 3imf_A          154 -------------IHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVP------  214 (257)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTST------
T ss_pred             -------------HHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcCC------
Confidence                         5799999999888887774    44899999999999998643321111111122222222      


Q ss_pred             ccCcccHHHHHHHHHhhhcCCC--CCceE-EecC
Q 023689          225 WLGAVPVKDVAKAQVLLFESPA--ASGRY-LCTN  255 (278)
Q Consensus       225 ~~~~i~~~D~a~~~~~~~~~~~--~~~~~-~~~~  255 (278)
                      ...+.+++|+|+++++++....  ..|.. .+.+
T Consensus       215 ~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdG  248 (257)
T 3imf_A          215 LGRLGTPEEIAGLAYYLCSDEAAYINGTCMTMDG  248 (257)
T ss_dssp             TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCCcCHHHHHHHHHHHcCchhcCccCCEEEECC
Confidence            3567899999999999987543  24654 4443

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.96  E-value=3.7e-29  Score=205.80  Aligned_cols=230  Identities=20%  Similarity=0.126  Sum_probs=162.0

Q ss_pred             ccccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc-
Q 023689            2 ASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-   79 (278)
Q Consensus         2 ~~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-   79 (278)
                      .+|+.+++|++|||||+|+||++++++|.++|+ .|++..|+.+..+... .+..... ++.++++|++|+++++++++ 
T Consensus        21 ~~m~~~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~   98 (283)
T 3v8b_A           21 QSMMNQPSPVALITGAGSGIGRATALALAADGV-TVGALGRTRTEVEEVADEIVGAGG-QAIALEADVSDELQMRNAVRD   98 (283)
T ss_dssp             ------CCCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHTTTTC-CEEEEECCTTCHHHHHHHHHH
T ss_pred             hhhcCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHH
Confidence            356777889999999999999999999999999 8988888765433322 2222222 78999999999999888876 


Q ss_pred             ------CccEEEEecccCCC-----CCCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCc
Q 023689           80 ------GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGK  144 (278)
Q Consensus        80 ------~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~  144 (278)
                            ++|++||+||....     +...++++..+++|+.++.++++++    ++++.+++|++||..+....+.    
T Consensus        99 ~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~----  174 (283)
T 3v8b_A           99 LVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTT----  174 (283)
T ss_dssp             HHHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCS----
T ss_pred             HHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCC----
Confidence                  68999999997532     2233567889999999999998887    5566789999999776542111    


Q ss_pred             cccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcc
Q 023689          145 VFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ  221 (278)
Q Consensus       145 ~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~  221 (278)
                                    +....|+.+|.+.+.+.+.++.+   +|+++++++||.|.++...........     ....+...
T Consensus       175 --------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~-----~~~~~~~~  235 (283)
T 3v8b_A          175 --------------PGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEE-----ETAIPVEW  235 (283)
T ss_dssp             --------------TTCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHH-----HHSCCCBC
T ss_pred             --------------CCchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccch-----hhhhhhhh
Confidence                          01257999999999999999876   489999999999999875443111110     01111111


Q ss_pred             -----cccccCcccHHHHHHHHHhhhcCCC--CCceEEecCc
Q 023689          222 -----EYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLCTNG  256 (278)
Q Consensus       222 -----~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~~  256 (278)
                           +.....+.+++|+|+++++++....  ..|..+..++
T Consensus       236 ~~~~~p~~~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdG  277 (283)
T 3v8b_A          236 PKGQVPITDGQPGRSEDVAELIRFLVSERARHVTGSPVWIDG  277 (283)
T ss_dssp             TTCSCGGGTTCCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             hhhcCccccCCCCCHHHHHHHHHHHcCccccCCcCCEEEECc
Confidence                 1111557899999999999986543  3465543333

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.96  E-value=7.2e-29  Score=205.12  Aligned_cols=231  Identities=16%  Similarity=0.078  Sum_probs=166.0

Q ss_pred             cccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc---
Q 023689            3 SEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---   79 (278)
Q Consensus         3 ~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---   79 (278)
                      +|..+++|++|||||+|+||++++++|+++|+ .|++..|+.+..+......  . .++.++++|++|++++.++++   
T Consensus        10 ~~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~~--~-~~~~~~~~Dl~d~~~v~~~~~~~~   85 (291)
T 3rd5_A           10 DLPSFAQRTVVITGANSGLGAVTARELARRGA-TVIMAVRDTRKGEAAARTM--A-GQVEVRELDLQDLSSVRRFADGVS   85 (291)
T ss_dssp             GCCCCTTCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTTS--S-SEEEEEECCTTCHHHHHHHHHTCC
T ss_pred             hccCCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHh--c-CCeeEEEcCCCCHHHHHHHHHhcC
Confidence            45667789999999999999999999999999 8999998765543332211  1 279999999999999999987   


Q ss_pred             CccEEEEecccCCC--CCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhh
Q 023689           80 GCKGVFHVASPCTL--EDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYC  157 (278)
Q Consensus        80 ~~d~vi~~a~~~~~--~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~  157 (278)
                      ++|+|||+||....  ....++++..+++|+.++.++++++.....++||++||..++.+..... ....|..+..+   
T Consensus        86 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~~-~~~~~~~~~~~---  161 (291)
T 3rd5_A           86 GADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLE-DLNWRSRRYSP---  161 (291)
T ss_dssp             CEEEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCSS-CTTCSSSCCCH---
T ss_pred             CCCEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCcc-cccccccCCCC---
Confidence            56999999997653  2345678899999999999999999888777999999988776543321 11112122222   


Q ss_pred             hccCchhhhHHHHHHHHHHHHHHhc---C--CceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHH
Q 023689          158 KSRKKWYPVSKTLAEKAAWEFAEKH---G--VDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVK  232 (278)
Q Consensus       158 ~~~~~~y~~sK~~~e~~~~~~~~~~---~--~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  232 (278)
                         ...|+.||.+.+.+.+.++++.   |  +++++++||.|.++.........   ... ....+     ..+-..+++
T Consensus       162 ---~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~~---~~~-~~~~~-----~~~~~~~~~  229 (291)
T 3rd5_A          162 ---WLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKL---GDA-LMSAA-----TRVVATDAD  229 (291)
T ss_dssp             ---HHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC-----------------------------CHHHH
T ss_pred             ---cchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchHH---HHH-HHHHH-----HHHHhCCHH
Confidence               2579999999999998888764   5  99999999999998754321111   111 11111     123345699


Q ss_pred             HHHHHHHhhhcCCCCCceEEe
Q 023689          233 DVAKAQVLLFESPAASGRYLC  253 (278)
Q Consensus       233 D~a~~~~~~~~~~~~~~~~~~  253 (278)
                      |+|+++++++..+...|.|+.
T Consensus       230 ~~A~~~~~l~~~~~~~G~~~~  250 (291)
T 3rd5_A          230 FGARQTLYAASQDLPGDSFVG  250 (291)
T ss_dssp             HHHHHHHHHHHSCCCTTCEEE
T ss_pred             HHHHHHHHHHcCCCCCCceeC
Confidence            999999999988766776643

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.96  E-value=4.3e-29  Score=205.04  Aligned_cols=224  Identities=20%  Similarity=0.149  Sum_probs=164.6

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc---
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE---   79 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---   79 (278)
                      |..+++|++|||||+|+||++++++|+++|+ .|++..|+.+..+.+. .+.... .++.++.+|++|++++.++++   
T Consensus         3 m~~l~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~   80 (280)
T 3tox_A            3 MSRLEGKIAIVTGASSGIGRAAALLFAREGA-KVVVTARNGNALAELTDEIAGGG-GEAAALAGDVGDEALHEALVELAV   80 (280)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHTTTT-CCEEECCCCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHHHHHHHH
Confidence            6678899999999999999999999999999 8988888765433322 222222 278999999999999888876   


Q ss_pred             ----CccEEEEecccCCC-----CCCCCchhhhhhhHHhHHHHHHHHHH----hcCCCEEEEecceeee-ecCCCCCCcc
Q 023689           80 ----GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAI-VPNPGWKGKV  145 (278)
Q Consensus        80 ----~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~v~~Ss~~~~-~~~~~~~~~~  145 (278)
                          ++|++|||||....     +...++++..+++|+.|+.++++++.    +.+.+++|++||..++ .+.+.     
T Consensus        81 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----  155 (280)
T 3tox_A           81 RRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAG-----  155 (280)
T ss_dssp             HHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCCTT-----
T ss_pred             HHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCCCC-----
Confidence                68999999996532     22345678899999999999888773    4456799999997765 23222     


Q ss_pred             ccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCC-chhHHHHHHHhhCCCCcc
Q 023689          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYL-NASCAVLQQLLQGSKDTQ  221 (278)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~  221 (278)
                                     ...|+.+|.+.+.+.+.++.+.   |+++++++||.|.++...... ..............+   
T Consensus       156 ---------------~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p---  217 (280)
T 3tox_A          156 ---------------VAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHA---  217 (280)
T ss_dssp             ---------------CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTST---
T ss_pred             ---------------chhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCc---
Confidence                           1579999999999998888764   899999999999998754311 111222223333332   


Q ss_pred             cccccCcccHHHHHHHHHhhhcCCC--CCce-EEecC
Q 023689          222 EYHWLGAVPVKDVAKAQVLLFESPA--ASGR-YLCTN  255 (278)
Q Consensus       222 ~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~  255 (278)
                         ...+.+++|+|+++++++....  ..|. +++.+
T Consensus       218 ---~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdG  251 (280)
T 3tox_A          218 ---LKRIARPEEIAEAALYLASDGASFVTGAALLADG  251 (280)
T ss_dssp             ---TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             ---cCCCcCHHHHHHHHHHHhCccccCCcCcEEEECC
Confidence               3567899999999999987643  3464 44443

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.96  E-value=2.5e-29  Score=202.87  Aligned_cols=218  Identities=19%  Similarity=0.219  Sum_probs=163.9

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCC-CCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc------
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG-SDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~-~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~------   79 (278)
                      ++|++|||||+|+||++++++|+++|+ .|++..++. +..+.+. .+.... .++.++++|++|+++++++++      
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~   80 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGY-NVAVNYAGSKEKAEAVVEEIKAKG-VDSFAIQANVADADEVKAMIKEVVSQF   80 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTT-SCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            458999999999999999999999999 787776643 2222211 111111 278899999999999888876      


Q ss_pred             -CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccCCC
Q 023689           80 -GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (278)
Q Consensus        80 -~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~  150 (278)
                       ++|++||+||....    +...++|+..+++|+.++.++++++    ++++.++||++||..++.+.+..         
T Consensus        81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  151 (246)
T 3osu_A           81 GSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQ---------  151 (246)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTC---------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCC---------
Confidence             78999999997643    2234567889999999999999988    55667899999998887665432         


Q ss_pred             CCchhhhhccCchhhhHHHHHHHHHHHHHH---hcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccC
Q 023689          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (278)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (278)
                                 ..|+.||...+.+.+.++.   .+|+++++++||.+.++.....   ..........+.|      ...
T Consensus       152 -----------~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~---~~~~~~~~~~~~p------~~r  211 (246)
T 3osu_A          152 -----------ANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDAL---SDELKEQMLTQIP------LAR  211 (246)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCS---CHHHHHHHHTTCT------TCS
T ss_pred             -----------hHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCccccc---CHHHHHHHHhcCC------CCC
Confidence                       5799999999999888887   4589999999999999875543   2334444444444      356


Q ss_pred             cccHHHHHHHHHhhhcCCCC--Cce-EEecCc
Q 023689          228 AVPVKDVAKAQVLLFESPAA--SGR-YLCTNG  256 (278)
Q Consensus       228 ~i~~~D~a~~~~~~~~~~~~--~~~-~~~~~~  256 (278)
                      +.+++|+|+++++++.....  .|. +++.++
T Consensus       212 ~~~~~dva~~v~~l~s~~~~~itG~~i~vdgG  243 (246)
T 3osu_A          212 FGQDTDIANTVAFLASDKAKYITGQTIHVNGG  243 (246)
T ss_dssp             CBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             CcCHHHHHHHHHHHhCccccCCCCCEEEeCCC
Confidence            78999999999999875433  364 455443

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.96  E-value=7.8e-29  Score=204.62  Aligned_cols=222  Identities=21%  Similarity=0.205  Sum_probs=166.6

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc---
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE---   79 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---   79 (278)
                      |..+++|++|||||+|+||++++++|+++|+ .|++..|+.+..+... .+......++.++++|++|+++++++++   
T Consensus        36 m~~l~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  114 (293)
T 3rih_A           36 MFDLSARSVLVTGGTKGIGRGIATVFARAGA-NVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVV  114 (293)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHH
Confidence            5567789999999999999999999999999 8999998776544332 2222221378999999999998888765   


Q ss_pred             ----CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeee-ecCCCCCCccc
Q 023689           80 ----GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAI-VPNPGWKGKVF  146 (278)
Q Consensus        80 ----~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~-~~~~~~~~~~~  146 (278)
                          ++|++||+||.....    ...++|+..+++|+.++.++++++    ++.+.++||++||..+. .+.+..     
T Consensus       115 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~~~~-----  189 (293)
T 3rih_A          115 DAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGW-----  189 (293)
T ss_dssp             HHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBCTTC-----
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCCCCC-----
Confidence                579999999976542    233567889999999999999887    45667899999997764 443322     


Q ss_pred             cCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccc
Q 023689          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (278)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (278)
                                     ..|+.+|...+.+.+.++.+   +|+++++++||.|+++.....   ............|     
T Consensus       190 ---------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~---~~~~~~~~~~~~p-----  246 (293)
T 3rih_A          190 ---------------SHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDM---GEEYISGMARSIP-----  246 (293)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHT---CHHHHHHHHTTST-----
T ss_pred             ---------------HHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhc---cHHHHHHHHhcCC-----
Confidence                           57999999999999988876   599999999999999854322   1233444444443     


Q ss_pred             cccCcccHHHHHHHHHhhhcCCC--CCce-EEecC
Q 023689          224 HWLGAVPVKDVAKAQVLLFESPA--ASGR-YLCTN  255 (278)
Q Consensus       224 ~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~  255 (278)
                       ...+..++|+|+++++++....  ..|. +.+.+
T Consensus       247 -~~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdG  280 (293)
T 3rih_A          247 -MGMLGSPVDIGHLAAFLATDEAGYITGQAIVVDG  280 (293)
T ss_dssp             -TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             -CCCCCCHHHHHHHHHHHhCccccCCCCCEEEECC
Confidence             3456789999999999986543  3464 44443

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.96  E-value=1.1e-29  Score=206.43  Aligned_cols=222  Identities=16%  Similarity=0.165  Sum_probs=162.7

Q ss_pred             cccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecC-CCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc---
Q 023689            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFP-GSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE---   79 (278)
Q Consensus         5 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~-~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---   79 (278)
                      ..+++|++|||||+|+||++++++|+++|+ +|+++.|+ ++..+.+. .+.... .++.++.+|++|++++.++++   
T Consensus         3 ~~l~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~   80 (258)
T 3afn_B            3 PDLKGKRVLITGSSQGIGLATARLFARAGA-KVGLHGRKAPANIDETIASMRADG-GDAAFFAADLATSEACQQLVDEFV   80 (258)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCCTTHHHHHHHHHHTT-CEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEECCCchhhHHHHHHHHHhcC-CceEEEECCCCCHHHHHHHHHHHH
Confidence            356679999999999999999999999999 89999987 54433221 111111 278999999999999998887   


Q ss_pred             ----CccEEEEeccc-CCC----CCCCCchhhhhhhHHhHHHHHHHHHHh----cC--C---CEEEEecceeeee-cCCC
Q 023689           80 ----GCKGVFHVASP-CTL----EDPVDPEKELILPAVQGTLNVLEAAKR----FG--V---RRVVVTSSISAIV-PNPG  140 (278)
Q Consensus        80 ----~~d~vi~~a~~-~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~----~~--~---~~~v~~Ss~~~~~-~~~~  140 (278)
                          ++|+|||+||. ...    +...+.++..+++|+.++.++++++.+    .+  .   ++||++||..+.. +.+.
T Consensus        81 ~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~  160 (258)
T 3afn_B           81 AKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPG  160 (258)
T ss_dssp             HHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCTT
T ss_pred             HHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCCC
Confidence                79999999996 322    112234678899999999998886632    22  2   6899999976654 2221


Q ss_pred             CCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCC
Q 023689          141 WKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGS  217 (278)
Q Consensus       141 ~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~  217 (278)
                                          ...|+.+|.+.+.+.+.++.+.   |++++++|||.++|+.....   ...+......+.
T Consensus       161 --------------------~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~  217 (258)
T 3afn_B          161 --------------------AGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADK---TQDVRDRISNGI  217 (258)
T ss_dssp             --------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTC---CHHHHHHHHTTC
T ss_pred             --------------------chHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCccccccccc---CHHHHHHHhccC
Confidence                                2579999999999999888654   99999999999999865432   223334444443


Q ss_pred             CCcccccccCcccHHHHHHHHHhhhcCCC---CCc-eEEecCcc
Q 023689          218 KDTQEYHWLGAVPVKDVAKAQVLLFESPA---ASG-RYLCTNGI  257 (278)
Q Consensus       218 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~~---~~~-~~~~~~~~  257 (278)
                      +      ...+++++|+|++++.++.+..   ..| .|++.++.
T Consensus       218 ~------~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gg~  255 (258)
T 3afn_B          218 P------MGRFGTAEEMAPAFLFFASHLASGYITGQVLDINGGQ  255 (258)
T ss_dssp             T------TCSCBCGGGTHHHHHHHHCHHHHTTCCSEEEEESTTS
T ss_pred             C------CCcCCCHHHHHHHHHHHhCcchhccccCCEEeECCCc
Confidence            3      3568999999999999987542   245 46666553

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.96  E-value=4.8e-29  Score=201.04  Aligned_cols=219  Identities=19%  Similarity=0.150  Sum_probs=161.1

Q ss_pred             cccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCCCCCCceEEEEccCCChhhHHHHhc---C
Q 023689            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE---G   80 (278)
Q Consensus         5 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~---~   80 (278)
                      +.+++|++|||||+|+||++++++|+++|+ .|+++.|+.+..+.+.. ..     +++++.+|++|++++.++++   +
T Consensus         3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~   76 (244)
T 3d3w_A            3 LFLAGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVSRTQADLDSLVRECP-----GIEPVCVDLGDWEATERALGSVGP   76 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHST-----TCEEEECCTTCHHHHHHHHTTCCC
T ss_pred             cccCCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcC-----CCCEEEEeCCCHHHHHHHHHHcCC
Confidence            357789999999999999999999999999 89988887644332221 11     46778999999999999986   5


Q ss_pred             ccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHh----cC-CCEEEEecceeeeecCCCCCCccccCCCC
Q 023689           81 CKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FG-VRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (278)
Q Consensus        81 ~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~----~~-~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~  151 (278)
                      +|+|||+||.....    ...+.++..+++|+.++.++++++.+    ++ .++||++||..++.+.+.           
T Consensus        77 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-----------  145 (244)
T 3d3w_A           77 VDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTN-----------  145 (244)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTT-----------
T ss_pred             CCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCCC-----------
Confidence            79999999975431    12345688999999999888887754    35 689999999776543222           


Q ss_pred             CchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCc
Q 023689          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (278)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (278)
                               ...|+.+|.+.|.+.+.++.+   ++++++++|||.++|+....... .......+..+.+      ...+
T Consensus       146 ---------~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~-~~~~~~~~~~~~~------~~~~  209 (244)
T 3d3w_A          146 ---------HSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWS-DPHKAKTMLNRIP------LGKF  209 (244)
T ss_dssp             ---------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSC-STTHHHHHHHTCT------TCSC
T ss_pred             ---------CchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhcc-ChHHHHHHHhhCC------CCCC
Confidence                     157999999999999998876   58999999999999986431100 0111222333332      3578


Q ss_pred             ccHHHHHHHHHhhhcCCC--CCc-eEEecCc
Q 023689          229 VPVKDVAKAQVLLFESPA--ASG-RYLCTNG  256 (278)
Q Consensus       229 i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  256 (278)
                      ++++|+|++++.++.+..  ..| .+++.++
T Consensus       210 ~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  240 (244)
T 3d3w_A          210 AEVEHVVNAILFLLSDRSGMTTGSTLPVEGG  240 (244)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCHHHHHHHHHHHcCccccCCCCCEEEECCC
Confidence            999999999999997543  245 4555543

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.96  E-value=2.7e-29  Score=204.75  Aligned_cols=220  Identities=17%  Similarity=0.132  Sum_probs=158.6

Q ss_pred             cccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc---
Q 023689            3 SEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---   79 (278)
Q Consensus         3 ~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---   79 (278)
                      +|.++++|++|||||+|+||++++++|+++|+ .|++..|+.+..+.+....  . .++.++.+|++|+++++++++   
T Consensus        21 ~m~~l~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~--~-~~~~~~~~Dv~d~~~v~~~~~~~~   96 (266)
T 3grp_A           21 SMFKLTGRKALVTGATGGIGEAIARCFHAQGA-IVGLHGTREDKLKEIAADL--G-KDVFVFSANLSDRKSIKQLAEVAE   96 (266)
T ss_dssp             CTTCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH--C-SSEEEEECCTTSHHHHHHHHHHHH
T ss_pred             chhccCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh--C-CceEEEEeecCCHHHHHHHHHHHH
Confidence            56778899999999999999999999999999 8888888765433322111  1 178999999999999888876   


Q ss_pred             ----CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCcccc
Q 023689           80 ----GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFD  147 (278)
Q Consensus        80 ----~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~  147 (278)
                          ++|+|||+||.....    ...++|+..+++|+.++.++.+++    ++++.++||++||..++.+.+..      
T Consensus        97 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~------  170 (266)
T 3grp_A           97 REMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQ------  170 (266)
T ss_dssp             HHHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------CH------
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCCCc------
Confidence                689999999976532    223467888999999966665554    55667899999998887654331      


Q ss_pred             CCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccc
Q 023689          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (278)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (278)
                                    ..|+.+|.+.+.+.+.++.+   +|+++++++||.+.++.....   ............|      
T Consensus       171 --------------~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~---~~~~~~~~~~~~p------  227 (266)
T 3grp_A          171 --------------TNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKL---NEKQKEAIMAMIP------  227 (266)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTC---CHHHHHHHHTTCT------
T ss_pred             --------------hhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhcc---CHHHHHHHHhcCC------
Confidence                          57999999999888888865   489999999999998754332   1223333344333      


Q ss_pred             ccCcccHHHHHHHHHhhhcCCC--CCceE-EecC
Q 023689          225 WLGAVPVKDVAKAQVLLFESPA--ASGRY-LCTN  255 (278)
Q Consensus       225 ~~~~i~~~D~a~~~~~~~~~~~--~~~~~-~~~~  255 (278)
                      ...+.+++|+|+++++++....  ..|.. .+.+
T Consensus       228 ~~r~~~~edvA~~v~~L~s~~~~~itG~~i~vdG  261 (266)
T 3grp_A          228 MKRMGIGEEIAFATVYLASDEAAYLTGQTLHING  261 (266)
T ss_dssp             TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCCcCHHHHHHHHHHHhCccccCccCCEEEECC
Confidence            4567899999999999987543  24654 4443

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.96  E-value=4.5e-29  Score=203.06  Aligned_cols=228  Identities=17%  Similarity=0.123  Sum_probs=162.8

Q ss_pred             CccccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHh-
Q 023689            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAV-   78 (278)
Q Consensus         1 m~~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~-   78 (278)
                      |+....+++|++|||||+|+||++++++|+++|+ .|++..|+.+..+... .+...+ .++.++.+|++|++++++++ 
T Consensus         1 m~~~~~l~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~   78 (260)
T 2ae2_A            1 MAGRWNLEGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKG-FKVEASVCDLSSRSERQELMN   78 (260)
T ss_dssp             -CCTTCCTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT-CEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCccCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHH
Confidence            5443456789999999999999999999999999 8988888764432221 111111 27889999999999988887 


Q ss_pred             -------cCccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCC
Q 023689           79 -------EGCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKG  143 (278)
Q Consensus        79 -------~~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~  143 (278)
                             .++|+|||+||....    +...++++..+++|+.++.++++++    ++++.++||++||..++.+.+..  
T Consensus        79 ~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--  156 (260)
T 2ae2_A           79 TVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYE--  156 (260)
T ss_dssp             HHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTC--
T ss_pred             HHHHHcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCc--
Confidence                   468999999997543    1233467889999999999998887    44567899999997765443321  


Q ss_pred             ccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCC--chhHHHHHHHhhCCC
Q 023689          144 KVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYL--NASCAVLQQLLQGSK  218 (278)
Q Consensus       144 ~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~--~~~~~~~~~~~~~~~  218 (278)
                                        ..|+.+|...+.+.+.++.+.   |+++++++||.+.++......  ......+.......|
T Consensus       157 ------------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  218 (260)
T 2ae2_A          157 ------------------AVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCA  218 (260)
T ss_dssp             ------------------HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTST
T ss_pred             ------------------chHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcCC
Confidence                              579999999999999988764   899999999999987422110  001111112223222


Q ss_pred             CcccccccCcccHHHHHHHHHhhhcCCC--CCce-EEecCc
Q 023689          219 DTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGR-YLCTNG  256 (278)
Q Consensus       219 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  256 (278)
                            ...+++++|+|+++++++....  ..|. +.+.++
T Consensus       219 ------~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG  253 (260)
T 2ae2_A          219 ------LRRMGEPKELAAMVAFLCFPAASYVTGQIIYVDGG  253 (260)
T ss_dssp             ------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ------CCCCCCHHHHHHHHHHHcCccccCCCCCEEEECCC
Confidence                  3568899999999999986532  3464 444443

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.96  E-value=3.9e-29  Score=205.60  Aligned_cols=230  Identities=20%  Similarity=0.159  Sum_probs=162.1

Q ss_pred             cccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCC-------------Ccccc-cCCCCCCCceEEEEccC
Q 023689            3 SEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-------------SSHLF-ALPGAGDANLRVFEADV   68 (278)
Q Consensus         3 ~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~-------------~~~~~-~~~~~~~~~v~~~~~Dl   68 (278)
                      .|..+++|++|||||+|+||++++++|+++|+ .|++.+|+...             .+... .+...+ .++.++++|+
T Consensus         9 ~~~~l~gk~~lVTGas~gIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv   86 (280)
T 3pgx_A            9 QAGSLQGRVAFITGAARGQGRSHAVRLAAEGA-DIIACDICAPVSASVTYAPASPEDLDETARLVEDQG-RKALTRVLDV   86 (280)
T ss_dssp             --CTTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTT-CCEEEEECCT
T ss_pred             cccccCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcC-CeEEEEEcCC
Confidence            45677889999999999999999999999999 88888874321             11111 111112 2789999999


Q ss_pred             CChhhHHHHhc-------CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHH----HhcC-CCEEEEecce
Q 023689           69 LDSGAVSRAVE-------GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFG-VRRVVVTSSI  132 (278)
Q Consensus        69 ~d~~~~~~~~~-------~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~----~~~~-~~~~v~~Ss~  132 (278)
                      +|+++++++++       ++|++||+||.....    ...+.++..+++|+.++.++++++    ++++ .++||++||.
T Consensus        87 ~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~  166 (280)
T 3pgx_A           87 RDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSS  166 (280)
T ss_dssp             TCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCG
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcch
Confidence            99999988876       689999999976542    234567889999999999988887    3333 5789999998


Q ss_pred             eeeecCCCCCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHH
Q 023689          133 SAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAV  209 (278)
Q Consensus       133 ~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~  209 (278)
                      .++.+.+..                    ..|+.+|.+.+.+.+.++.+   +|+++++++||.++++.....  .....
T Consensus       167 ~~~~~~~~~--------------------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~--~~~~~  224 (280)
T 3pgx_A          167 AGLKATPGN--------------------GHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPE--AMMEI  224 (280)
T ss_dssp             GGTSCCTTB--------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHH--HHHHH
T ss_pred             hhccCCCCc--------------------hhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchh--hhhhh
Confidence            876554432                    57999999999999988876   699999999999999875421  11111


Q ss_pred             HHHH---hhCCCCcccccccCcccHHHHHHHHHhhhcCCC--CCce-EEecCcc
Q 023689          210 LQQL---LQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGR-YLCTNGI  257 (278)
Q Consensus       210 ~~~~---~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~~  257 (278)
                      +...   ....+ ........+++++|+|+++++++....  ..|. +.+.++.
T Consensus       225 ~~~~~~~~~~~~-~~~~~~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  277 (280)
T 3pgx_A          225 FARHPSFVHSFP-PMPVQPNGFMTADEVADVVAWLAGDGSGTLTGTQIPVDKGA  277 (280)
T ss_dssp             HHHCGGGGGGSC-CBTTBCSSCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTTG
T ss_pred             hhcCchhhhhhh-hcccCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            1110   00000 111122258999999999999986543  3464 4555443

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.96  E-value=7.4e-29  Score=201.79  Aligned_cols=224  Identities=17%  Similarity=0.164  Sum_probs=162.9

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      .+++|++|||||+|+||++++++|+++|+ +|+++.|+.+..+... .+.... .++.++.+|++|++++.++++     
T Consensus        10 ~l~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (260)
T 3awd_A           10 RLDNRVAIVTGGAQNIGLACVTALAEAGA-RVIIADLDEAMATKAVEDLRMEG-HDVSSVVMDVTNTESVQNAVRSVHEQ   87 (260)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CceEEEEecCCCHHHHHHHHHHHHHH
Confidence            45678999999999999999999999999 8999988754332211 111111 178999999999999988876     


Q ss_pred             --CccEEEEecccCC-C----CCCCCchhhhhhhHHhHHHHHHHHHHh----cCCCEEEEecceeeeecCCCCCCccccC
Q 023689           80 --GCKGVFHVASPCT-L----EDPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (278)
Q Consensus        80 --~~d~vi~~a~~~~-~----~~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~E  148 (278)
                        ++|+|||+||... .    +...+.++..+++|+.++.++++++.+    .+.+++|++||.++..+.+..       
T Consensus        88 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-------  160 (260)
T 3awd_A           88 EGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQ-------  160 (260)
T ss_dssp             HSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSS-------
T ss_pred             cCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCCC-------
Confidence              6899999999754 2    112234578899999999999888754    467899999997765432210       


Q ss_pred             CCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccc
Q 023689          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (278)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (278)
                                 +...|+.+|.+.+.+.+.++++   +|++++++|||.++|+...... ....+......+.+      .
T Consensus       161 -----------~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~-~~~~~~~~~~~~~~------~  222 (260)
T 3awd_A          161 -----------QQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGM-EKPELYDAWIAGTP------M  222 (260)
T ss_dssp             -----------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHH-TCHHHHHHHHHTCT------T
T ss_pred             -----------CccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhccc-CChHHHHHHHhcCC------c
Confidence                       1147999999999999998876   6999999999999999754110 01233334444433      3


Q ss_pred             cCcccHHHHHHHHHhhhcCCC--CCc-eEEecCc
Q 023689          226 LGAVPVKDVAKAQVLLFESPA--ASG-RYLCTNG  256 (278)
Q Consensus       226 ~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  256 (278)
                      ..+++++|+|++++.++....  ..| .+++.++
T Consensus       223 ~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg  256 (260)
T 3awd_A          223 GRVGQPDEVASVVQFLASDAASLMTGAIVNVDAG  256 (260)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCCCHHHHHHHHHHHhCchhccCCCcEEEECCc
Confidence            468899999999999986532  245 4555544

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.96  E-value=8.7e-29  Score=201.73  Aligned_cols=224  Identities=19%  Similarity=0.118  Sum_probs=161.9

Q ss_pred             ccccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc-
Q 023689            2 ASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-   79 (278)
Q Consensus         2 ~~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-   79 (278)
                      .+|..+++|++|||||+|+||++++++|+++|+ .|++..|+.+..+... .+.   . ++.++++|++|++++.++++ 
T Consensus         5 ~~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~---~-~~~~~~~D~~d~~~v~~~~~~   79 (263)
T 3ak4_A            5 AGIFDLSGRKAIVTGGSKGIGAAIARALDKAGA-TVAIADLDVMAAQAVVAGLE---N-GGFAVEVDVTKRASVDAAMQK   79 (263)
T ss_dssp             -CTTCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCT---T-CCEEEECCTTCHHHHHHHHHH
T ss_pred             ccCcCCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHh---c-CCeEEEEeCCCHHHHHHHHHH
Confidence            344567789999999999999999999999999 8998888764433322 121   1 67889999999999988887 


Q ss_pred             ------CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHh----cC-CCEEEEecceeeeecCCCCCCc
Q 023689           80 ------GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FG-VRRVVVTSSISAIVPNPGWKGK  144 (278)
Q Consensus        80 ------~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~----~~-~~~~v~~Ss~~~~~~~~~~~~~  144 (278)
                            ++|+|||+||.....    ...++++..+++|+.++.++++++.+    ++ .+++|++||..+..+.+.    
T Consensus        80 ~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----  155 (263)
T 3ak4_A           80 AIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPL----  155 (263)
T ss_dssp             HHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTT----
T ss_pred             HHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCCC----
Confidence                  789999999975432    22346788999999999998887744    34 589999999776544322    


Q ss_pred             cccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCch---h-----HHHHHHH
Q 023689          145 VFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNA---S-----CAVLQQL  213 (278)
Q Consensus       145 ~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~---~-----~~~~~~~  213 (278)
                                      ...|+.+|...+.+.+.++.+   +|++++++|||.++++........   .     .......
T Consensus       156 ----------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  219 (263)
T 3ak4_A          156 ----------------LAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEY  219 (263)
T ss_dssp             ----------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHH
T ss_pred             ----------------chhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHH
Confidence                            157999999999999888865   499999999999998753211000   0     1112222


Q ss_pred             hhCCCCcccccccCcccHHHHHHHHHhhhcCCC--CCce-EEecCc
Q 023689          214 LQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGR-YLCTNG  256 (278)
Q Consensus       214 ~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  256 (278)
                      ....|      ...+++++|+|+++++++....  ..|. +++.++
T Consensus       220 ~~~~p------~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG  259 (263)
T 3ak4_A          220 VSLTP------LGRIEEPEDVADVVVFLASDAARFMTGQGINVTGG  259 (263)
T ss_dssp             HHTCT------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             HhcCC------CCCCcCHHHHHHHHHHHhCccccCCCCCEEEECcC
Confidence            22222      3568999999999999987542  3454 555443

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.96  E-value=8.9e-29  Score=201.73  Aligned_cols=207  Identities=18%  Similarity=0.170  Sum_probs=156.8

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc-------
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------   79 (278)
                      +++|++|||||+|+||++++++|+++|+ .|++..|+.+..+....      .++.++++|++|++++.++++       
T Consensus        14 ~~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~------~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   86 (266)
T 3p19_A           14 SMKKLVVITGASSGIGEAIARRFSEEGH-PLLLLARRVERLKALNL------PNTLCAQVDVTDKYTFDTAITRAEKIYG   86 (266)
T ss_dssp             -CCCEEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCHHHHHTTCC------TTEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHhhc------CCceEEEecCCCHHHHHHHHHHHHHHCC
Confidence            4568999999999999999999999999 88888887544332221      178899999999999888876       


Q ss_pred             CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccCCCC
Q 023689           80 GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (278)
Q Consensus        80 ~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~  151 (278)
                      ++|++||+||.....    ...+.++..+++|+.|+.++++++    ++.+.++||++||..++.+.+..          
T Consensus        87 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~----------  156 (266)
T 3p19_A           87 PADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDH----------  156 (266)
T ss_dssp             SEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTC----------
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCCCC----------
Confidence            689999999976542    223466788999999999966665    45677899999998876554432          


Q ss_pred             CchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCch-hHHHHHHHhhCCCCcccccccC
Q 023689          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNA-SCAVLQQLLQGSKDTQEYHWLG  227 (278)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  227 (278)
                                ..|+.+|...+.+.+.++.+   +|+++++++||.|.++........ .........  .      ....
T Consensus       157 ----------~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~--~------~~~r  218 (266)
T 3p19_A          157 ----------AAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAWR--V------DMGG  218 (266)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHHHH--H------HTTC
T ss_pred             ----------chHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhhHHHHhhc--c------cccC
Confidence                      57999999999998888876   589999999999999875433211 111111100  0      1345


Q ss_pred             cccHHHHHHHHHhhhcCCCCC
Q 023689          228 AVPVKDVAKAQVLLFESPAAS  248 (278)
Q Consensus       228 ~i~~~D~a~~~~~~~~~~~~~  248 (278)
                      +++++|+|+++++++.++...
T Consensus       219 ~~~pedvA~av~~l~~~~~~~  239 (266)
T 3p19_A          219 VLAADDVARAVLFAYQQPQNV  239 (266)
T ss_dssp             CBCHHHHHHHHHHHHHSCTTE
T ss_pred             CCCHHHHHHHHHHHHcCCCCc
Confidence            789999999999999887653

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.96  E-value=1e-28  Score=199.89  Aligned_cols=220  Identities=20%  Similarity=0.177  Sum_probs=159.8

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc-------C
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~   80 (278)
                      +|++|||||+|+||++++++|+++|+ .|++..|+.+..+... .+......++.++++|++|++++.++++       +
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGD-RVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGA   80 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            57999999999999999999999999 8999988764432221 1101111278999999999999988876       7


Q ss_pred             ccEEEEecccCCCCC-------CCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccCC
Q 023689           81 CKGVFHVASPCTLED-------PVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (278)
Q Consensus        81 ~d~vi~~a~~~~~~~-------~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~  149 (278)
                      +|+|||+||......       ..++++..+++|+.++.++++++    ++++.+++|++||..++.+.+..        
T Consensus        81 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~--------  152 (250)
T 2cfc_A           81 IDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGR--------  152 (250)
T ss_dssp             CCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTC--------
T ss_pred             CCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCc--------
Confidence            899999998754321       23456788999999987766655    45577899999998776543321        


Q ss_pred             CCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccccc
Q 023689          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (278)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (278)
                                  ..|+.+|.+.+.+.+.++.+.   |++++++|||.++|+...... ....+......+.|      ..
T Consensus       153 ------------~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~------~~  213 (250)
T 2cfc_A          153 ------------SAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRL-DQPELRDQVLARIP------QK  213 (250)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHH-TSHHHHHHHHTTCT------TC
T ss_pred             ------------hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCcccccc-CCHHHHHHHHhcCC------CC
Confidence                        579999999999999888764   999999999999999743210 01122333333333      34


Q ss_pred             CcccHHHHHHHHHhhhcCCCC--Cce-EEecCc
Q 023689          227 GAVPVKDVAKAQVLLFESPAA--SGR-YLCTNG  256 (278)
Q Consensus       227 ~~i~~~D~a~~~~~~~~~~~~--~~~-~~~~~~  256 (278)
                      .+.+++|+|++++.++.++..  .|. +.+.++
T Consensus       214 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  246 (250)
T 2cfc_A          214 EIGTAAQVADAVMFLAGEDATYVNGAALVMDGA  246 (250)
T ss_dssp             SCBCHHHHHHHHHHHHSTTCTTCCSCEEEESTT
T ss_pred             CCcCHHHHHHHHHHHcCchhhcccCCEEEECCc
Confidence            578999999999999876532  364 444443

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.96  E-value=9.2e-30  Score=206.44  Aligned_cols=229  Identities=16%  Similarity=0.091  Sum_probs=158.4

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc----CccEE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----GCKGV   84 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~----~~d~v   84 (278)
                      ||+||||||+||||++++++|+++|+ .|++++|+++....          .   +.+|++|++++.++++    ++|+|
T Consensus         1 Mk~vlVtGasg~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~----------~---~~~D~~~~~~~~~~~~~~~~~~d~v   66 (255)
T 2dkn_A            1 MSVIAITGSASGIGAALKELLARAGH-TVIGIDRGQADIEA----------D---LSTPGGRETAVAAVLDRCGGVLDGL   66 (255)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSSSEEC----------C---TTSHHHHHHHHHHHHHHHTTCCSEE
T ss_pred             CcEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEeCChhHccc----------c---ccCCcccHHHHHHHHHHcCCCccEE
Confidence            57999999999999999999999999 89999997654221          1   4589999999998886    89999


Q ss_pred             EEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhc----CCCEEEEecceeeeecCCCCCCccccC-------CCCCc
Q 023689           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF----GVRRVVVTSSISAIVPNPGWKGKVFDE-------TSWTD  153 (278)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~----~~~~~v~~Ss~~~~~~~~~~~~~~~~E-------~~~~~  153 (278)
                      ||+||....   ..+++..+++|+.++.++++++.+.    +.++||++||..++.+....  .+..|       +.+..
T Consensus        67 i~~Ag~~~~---~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~--~~~~~~~~~~~~~~~~~  141 (255)
T 2dkn_A           67 VCCAGVGVT---AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAE--LPMVEAMLAGDEARAIE  141 (255)
T ss_dssp             EECCCCCTT---SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGG--CHHHHHHHHTCHHHHHH
T ss_pred             EECCCCCCc---chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccc--cchhhhhcccchhhhhh
Confidence            999997542   3568899999999999999977553    56899999998776543110  11111       00000


Q ss_pred             h-hhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcc
Q 023689          154 L-EYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (278)
Q Consensus       154 ~-~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  229 (278)
                      . .....+...|+.+|.+.|.+.+.++++   +|++++++||+.++|+........  ..........   .+ ...+++
T Consensus       142 ~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~--~~~~~~~~~~---~~-~~~~~~  215 (255)
T 2dkn_A          142 LAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKAD--PRYGESTRRF---VA-PLGRGS  215 (255)
T ss_dssp             HHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHC--TTTHHHHHSC---CC-TTSSCB
T ss_pred             hccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccc--hhhHHHHHHH---HH-HhcCCC
Confidence            0 000012357999999999999988866   699999999999999853211000  0001111111   01 346789


Q ss_pred             cHHHHHHHHHhhhcCC--CCCc-eEEec-CccccHHH
Q 023689          230 PVKDVAKAQVLLFESP--AASG-RYLCT-NGIYQFGD  262 (278)
Q Consensus       230 ~~~D~a~~~~~~~~~~--~~~~-~~~~~-~~~~s~~e  262 (278)
                      +++|+|++++.++.++  ...| .|+++ +..++++|
T Consensus       216 ~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e  252 (255)
T 2dkn_A          216 EPREVAEAIAFLLGPQASFIHGSVLFVDGGMDALMRA  252 (255)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHHHCT
T ss_pred             CHHHHHHHHHHHhCCCcccceeeEEEecCCeEeeeec
Confidence            9999999999999865  2345 56554 44555543

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.96  E-value=4.9e-28  Score=192.09  Aligned_cols=216  Identities=18%  Similarity=0.141  Sum_probs=158.5

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc---CccE
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---GCKG   83 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---~~d~   83 (278)
                      +++|++|||||+++||+++++.|.++|+ +|++..|+.+..+....      .++..+++|++|+++++++++   ++|+
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga-~Vv~~~~~~~~~~~~~~------~~~~~~~~Dv~~~~~v~~~~~~~g~iDi   81 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGA-EVVALGLDADGVHAPRH------PRIRREELDITDSQRLQRLFEALPRLDV   81 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTSTTSCCC------TTEEEEECCTTCHHHHHHHHHHCSCCSE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHhhhhc------CCeEEEEecCCCHHHHHHHHHhcCCCCE
Confidence            5799999999999999999999999999 88888887765443221      288999999999999998876   5799


Q ss_pred             EEEecccCCC--CCCCCchhhhhhhHHhHHHHHHHHHH----hcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhh
Q 023689           84 VFHVASPCTL--EDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYC  157 (278)
Q Consensus        84 vi~~a~~~~~--~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~  157 (278)
                      +|||||....  +...++|+..+++|+.++..+.+++.    +.+ +++|++||..+..+.++.                
T Consensus        82 LVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~~~~~~~----------------  144 (242)
T 4b79_A           82 LVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRG-GSILNIASMYSTFGSADR----------------  144 (242)
T ss_dssp             EEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-EEEEEECCGGGTSCCSSC----------------
T ss_pred             EEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEeeccccCCCCCC----------------
Confidence            9999997554  22345789999999998888777663    334 799999998887665543                


Q ss_pred             hccCchhhhHHHHHHHHHHHHHH---hcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHHHH
Q 023689          158 KSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDV  234 (278)
Q Consensus       158 ~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  234 (278)
                          ..|+.||.....+.+.++.   ++||++++|.||.|.+|....... .....+++....|      ...+..++|+
T Consensus       145 ----~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~-~~~~~~~~~~~~P------lgR~g~peei  213 (242)
T 4b79_A          145 ----PAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKA-DVEATRRIMQRTP------LARWGEAPEV  213 (242)
T ss_dssp             ----HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CC-CHHHHHHHHHTCT------TCSCBCHHHH
T ss_pred             ----HHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccC-CHHHHHHHHhcCC------CCCCcCHHHH
Confidence                3466666666666555554   469999999999999986544321 2333444555444      3457789999


Q ss_pred             HHHHHhhhcCCC--CCceEEecCcc
Q 023689          235 AKAQVLLFESPA--ASGRYLCTNGI  257 (278)
Q Consensus       235 a~~~~~~~~~~~--~~~~~~~~~~~  257 (278)
                      |++++++.....  -.|+.+..++.
T Consensus       214 A~~v~fLaSd~a~~iTG~~l~VDGG  238 (242)
T 4b79_A          214 ASAAAFLCGPGASFVTGAVLAVDGG  238 (242)
T ss_dssp             HHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHhCchhcCccCceEEECcc
Confidence            999999986543  35665544443

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.96  E-value=3.6e-29  Score=204.34  Aligned_cols=221  Identities=15%  Similarity=0.131  Sum_probs=145.3

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHh------
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAV------   78 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~------   78 (278)
                      .+++|++|||||+|+||++++++|+++|+ .|+++.|+.+..+... .+.... .++.++.+|++|++++.+++      
T Consensus        11 ~l~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~   88 (266)
T 1xq1_A           11 SLKAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCARNEYELNECLSKWQKKG-FQVTGSVCDASLRPEREKLMQTVSSM   88 (266)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CeeEEEECCCCCHHHHHHHHHHHHHH
Confidence            45678999999999999999999999999 8998888754332211 111111 17889999999999888887      


Q ss_pred             --cCccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccC
Q 023689           79 --EGCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (278)
Q Consensus        79 --~~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E  148 (278)
                        .++|+|||+||.....    ...++++..+++|+.++.++++++    ++.+.++||++||..++.+.+.        
T Consensus        89 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------  160 (266)
T 1xq1_A           89 FGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASV--------  160 (266)
T ss_dssp             HTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC------------------
T ss_pred             hCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCCC--------
Confidence              4689999999975432    233466788999999999999888    4567789999999777654332        


Q ss_pred             CCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccc
Q 023689          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (278)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (278)
                                  ...|+.+|...+.+.+.++.+.   |++++++|||.++|+......  ...+........+      .
T Consensus       161 ------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~~~~------~  220 (266)
T 1xq1_A          161 ------------GSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVY--DDEFKKVVISRKP------L  220 (266)
T ss_dssp             ------------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC------------------------------
T ss_pred             ------------CchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhc--CHHHHHHHHhcCC------C
Confidence                        2579999999999999888764   999999999999998754321  1111111111111      2


Q ss_pred             cCcccHHHHHHHHHhhhcCCC--CCce-EEecCc
Q 023689          226 LGAVPVKDVAKAQVLLFESPA--ASGR-YLCTNG  256 (278)
Q Consensus       226 ~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  256 (278)
                      ..+++++|+|+++++++....  ..|. +.+.++
T Consensus       221 ~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  254 (266)
T 1xq1_A          221 GRFGEPEEVSSLVAFLCMPAASYITGQTICVDGG  254 (266)
T ss_dssp             ---CCGGGGHHHHHHHTSGGGTTCCSCEEECCCC
T ss_pred             CCCcCHHHHHHHHHHHcCccccCccCcEEEEcCC
Confidence            357899999999999986532  2454 444443

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.96  E-value=7e-29  Score=202.40  Aligned_cols=221  Identities=24%  Similarity=0.213  Sum_probs=157.9

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCC------CCceEEEEccCCChhhHHHHh
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAG------DANLRVFEADVLDSGAVSRAV   78 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~------~~~v~~~~~Dl~d~~~~~~~~   78 (278)
                      .+++|++|||||+|+||++++++|+++|+ .|+++.|+.+..+.+. .+....      ..++.++.+|++|++++.+++
T Consensus         4 ~~~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   82 (264)
T 2pd6_A            4 RLRSALALVTGAGSGIGRAVSVRLAGEGA-TVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLL   82 (264)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHH
Confidence            45678999999999999999999999999 8999988765433221 121111      026889999999999988887


Q ss_pred             cC-------c-cEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHhc----C-CCEEEEecceeeeecCCCC
Q 023689           79 EG-------C-KGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF----G-VRRVVVTSSISAIVPNPGW  141 (278)
Q Consensus        79 ~~-------~-d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~----~-~~~~v~~Ss~~~~~~~~~~  141 (278)
                      +.       + |+|||+||.....    ...+.++..+++|+.++.++++++.+.    + .++||++||..+.++.+..
T Consensus        83 ~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  162 (264)
T 2pd6_A           83 EQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQ  162 (264)
T ss_dssp             HHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCTTB
T ss_pred             HHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCCCC
Confidence            64       3 9999999975431    233567889999999999999987553    4 5789999997776554321


Q ss_pred             CCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCC
Q 023689          142 KGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSK  218 (278)
Q Consensus       142 ~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~  218 (278)
                                          ..|+.+|.+.+.+.+.++.+   +|++++++|||.++|+.....   ..........+.+
T Consensus       163 --------------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~  219 (264)
T 2pd6_A          163 --------------------TNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKV---PQKVVDKITEMIP  219 (264)
T ss_dssp             --------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC-------------CTGGGCT
T ss_pred             --------------------hhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhc---CHHHHHHHHHhCC
Confidence                                57999999999999988876   699999999999999975421   1111111111111


Q ss_pred             CcccccccCcccHHHHHHHHHhhhcCCC--CCce-EEecCc
Q 023689          219 DTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGR-YLCTNG  256 (278)
Q Consensus       219 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  256 (278)
                            ...+++++|+|++++.++....  ..|. +.+.++
T Consensus       220 ------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg  254 (264)
T 2pd6_A          220 ------MGHLGDPEDVADVVAFLASEDSGYITGTSVEVTGG  254 (264)
T ss_dssp             ------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ------CCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCC
Confidence                  3457899999999999987533  3454 444443

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.96  E-value=7.9e-29  Score=203.69  Aligned_cols=230  Identities=18%  Similarity=0.206  Sum_probs=158.1

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCC-CCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc--
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG-SDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE--   79 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~-~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--   79 (278)
                      |+.+++|++|||||+|+||++++++|+++|+ .|++..|+. +..+... .+......++.++.+|++|++++.++++  
T Consensus        20 ~~~l~~k~~lVTGas~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   98 (281)
T 3v2h_A           20 FQSMMTKTAVITGSTSGIGLAIARTLAKAGA-NIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMV   98 (281)
T ss_dssp             --CCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHH
Confidence            4566789999999999999999999999999 888888743 2222211 1111112278999999999999988876  


Q ss_pred             -----CccEEEEecccCCCCC----CCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccc
Q 023689           80 -----GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVF  146 (278)
Q Consensus        80 -----~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~  146 (278)
                           ++|++||+||......    ..+.++..+++|+.++.++++++    ++.+.++||++||..++.+.+..     
T Consensus        99 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----  173 (281)
T 3v2h_A           99 ADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFK-----  173 (281)
T ss_dssp             HHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTC-----
T ss_pred             HHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCCCc-----
Confidence                 6899999999755422    34567889999999999999887    45567899999998876654432     


Q ss_pred             cCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCC----CC
Q 023689          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGS----KD  219 (278)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~----~~  219 (278)
                                     ..|+.+|.+.+.+.+.++.+   +|+++++++||.|.++............ .......    ..
T Consensus       174 ---------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~  237 (281)
T 3v2h_A          174 ---------------SAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQART-RGITEEQVINEVM  237 (281)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC---------------------------
T ss_pred             ---------------hHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhh-cCCCHHHHHHHHH
Confidence                           57999999999999888875   4899999999999998654321100000 0000000    00


Q ss_pred             cccccccCcccHHHHHHHHHhhhcCCC--CCceE-EecC
Q 023689          220 TQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRY-LCTN  255 (278)
Q Consensus       220 ~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~-~~~~  255 (278)
                      ........+++++|+|+++++++....  ..|.. .+.+
T Consensus       238 ~~~~p~~r~~~~edvA~~v~~L~s~~a~~itG~~i~vdG  276 (281)
T 3v2h_A          238 LKGQPTKKFITVEQVASLALYLAGDDAAQITGTHVSMDG  276 (281)
T ss_dssp             --CCTTCSCBCHHHHHHHHHHHHSSGGGGCCSCEEEEST
T ss_pred             HhcCCCCCccCHHHHHHHHHHHcCCCcCCCCCcEEEECC
Confidence            011235779999999999999987643  34644 4443

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.96  E-value=1.5e-28  Score=199.81  Aligned_cols=214  Identities=16%  Similarity=0.087  Sum_probs=153.5

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCc-ccccCCCCCCCceEEEEccCCChhhHHHHhc---
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS-HLFALPGAGDANLRVFEADVLDSGAVSRAVE---   79 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~-~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---   79 (278)
                      |+++++|++|||||+|+||++++++|+++|+ .|++..|+.+... .+...      ++.++.+|++|++++.++++   
T Consensus        22 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~------~~~~~~~Dv~~~~~v~~~~~~~~   94 (260)
T 3gem_A           22 HMTLSSAPILITGASQRVGLHCALRLLEHGH-RVIISYRTEHASVTELRQA------GAVALYGDFSCETGIMAFIDLLK   94 (260)
T ss_dssp             -----CCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESSCCHHHHHHHHH------TCEEEECCTTSHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHhc------CCeEEECCCCCHHHHHHHHHHHH
Confidence            4456789999999999999999999999999 8888888765421 11111      57899999999999888875   


Q ss_pred             ----CccEEEEecccCCCCCC---CCchhhhhhhHHhHHHHHHHHHH----hcCCCEEEEecceeeeecCCCCCCccccC
Q 023689           80 ----GCKGVFHVASPCTLEDP---VDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (278)
Q Consensus        80 ----~~d~vi~~a~~~~~~~~---~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E  148 (278)
                          ++|+|||+||.......   .++++..+++|+.++.++++++.    +.+.++||++||..++.+.+..       
T Consensus        95 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~-------  167 (260)
T 3gem_A           95 TQTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKH-------  167 (260)
T ss_dssp             HHCSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCSSC-------
T ss_pred             HhcCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCc-------
Confidence                58999999997554322   23456889999999999888774    4466799999998876654432       


Q ss_pred             CCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc--CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccccc
Q 023689          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (278)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (278)
                                   ..|+.+|.+.+.+.+.++.+.  ++++++++||.+.++.....     ..........+      ..
T Consensus       168 -------------~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~~-----~~~~~~~~~~p------~~  223 (260)
T 3gem_A          168 -------------IAYCATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKDDA-----AYRANALAKSA------LG  223 (260)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC--------------------CC------SC
T ss_pred             -------------HhHHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCCCH-----HHHHHHHhcCC------CC
Confidence                         579999999999999988765  59999999999988753221     11222222222      34


Q ss_pred             CcccHHHHHHHHHhhhcCCCCCce-EEecC
Q 023689          227 GAVPVKDVAKAQVLLFESPAASGR-YLCTN  255 (278)
Q Consensus       227 ~~i~~~D~a~~~~~~~~~~~~~~~-~~~~~  255 (278)
                      .+.+++|+|+++++++++....|. +.+.+
T Consensus       224 r~~~~edva~~v~~L~~~~~itG~~i~vdG  253 (260)
T 3gem_A          224 IEPGAEVIYQSLRYLLDSTYVTGTTLTVNG  253 (260)
T ss_dssp             CCCCTHHHHHHHHHHHHCSSCCSCEEEEST
T ss_pred             CCCCHHHHHHHHHHHhhCCCCCCCEEEECC
Confidence            466899999999999976666675 44443

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.96  E-value=1.3e-28  Score=200.77  Aligned_cols=216  Identities=17%  Similarity=0.121  Sum_probs=158.5

Q ss_pred             ccccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc--
Q 023689            2 ASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--   79 (278)
Q Consensus         2 ~~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--   79 (278)
                      .+|+.+++|++|||||+|+||++++++|+++|+ .|++..|+.+....           ...+.+|++|.+++.++++  
T Consensus        21 ~~m~~l~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~-----------~~~~~~Dv~~~~~~~~~~~~~   88 (266)
T 3uxy_A           21 QSMQGFEGKVALVTGAAGGIGGAVVTALRAAGA-RVAVADRAVAGIAA-----------DLHLPGDLREAAYADGLPGAV   88 (266)
T ss_dssp             -----CTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECSSCCTTSCC-----------SEECCCCTTSHHHHHHHHHHH
T ss_pred             hhhhCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHh-----------hhccCcCCCCHHHHHHHHHHH
Confidence            467788899999999999999999999999999 89888886654322           2345799999988877765  


Q ss_pred             -----CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccc
Q 023689           80 -----GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVF  146 (278)
Q Consensus        80 -----~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~  146 (278)
                           ++|++||+||....    +...++++..+++|+.|+.++++++    ++++.++||++||..++.+.+..     
T Consensus        89 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~-----  163 (266)
T 3uxy_A           89 AAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGH-----  163 (266)
T ss_dssp             HHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCTTB-----
T ss_pred             HHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCC-----
Confidence                 68999999997654    2234567888999999999999987    55667899999998776554332     


Q ss_pred             cCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCC----CchhHHHHHHHhhCCCC
Q 023689          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPY----LNASCAVLQQLLQGSKD  219 (278)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~----~~~~~~~~~~~~~~~~~  219 (278)
                                     ..|+.+|.+.+.+.+.++.+.   |+++++++||.+.++.....    ...............| 
T Consensus       164 ---------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p-  227 (266)
T 3uxy_A          164 ---------------ALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVP-  227 (266)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTST-
T ss_pred             ---------------hHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcCC-
Confidence                           579999999999999888764   89999999999998753211    0011122233333333 


Q ss_pred             cccccccCcccHHHHHHHHHhhhcCCC--CCce-EEecC
Q 023689          220 TQEYHWLGAVPVKDVAKAQVLLFESPA--ASGR-YLCTN  255 (278)
Q Consensus       220 ~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~  255 (278)
                           ...+.+++|+|+++++++....  ..|. +.+.+
T Consensus       228 -----~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdG  261 (266)
T 3uxy_A          228 -----LGRIAEPEDIADVVLFLASDAARYLCGSLVEVNG  261 (266)
T ss_dssp             -----TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             -----CCCCcCHHHHHHHHHHHhCchhcCCcCCEEEECc
Confidence                 4668899999999999987643  3464 44443

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.96  E-value=4.9e-29  Score=202.30  Aligned_cols=222  Identities=18%  Similarity=0.172  Sum_probs=165.3

Q ss_pred             cccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCCCCCCceEEEEccCCChhhHHHHhc----
Q 023689            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE----   79 (278)
Q Consensus         5 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~----   79 (278)
                      ..+++|++|||||+|+||++++++|.++|+ .|++..|+.+..+.... +.... .++.++++|++|+++++++++    
T Consensus         8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~   85 (256)
T 3gaf_A            8 FHLNDAVAIVTGAAAGIGRAIAGTFAKAGA-SVVVTDLKSEGAEAVAAAIRQAG-GKAIGLECNVTDEQHREAVIKAALD   85 (256)
T ss_dssp             TCCTTCEEEECSCSSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHHHHHHHHH
Confidence            356789999999999999999999999999 88888887654333221 11111 278999999999999888876    


Q ss_pred             ---CccEEEEecccCCCC---CCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccCC
Q 023689           80 ---GCKGVFHVASPCTLE---DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (278)
Q Consensus        80 ---~~d~vi~~a~~~~~~---~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~  149 (278)
                         ++|++||+||.....   ...++++..+++|+.++.++++++    ++++.++||++||..++.+.+..        
T Consensus        86 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------  157 (256)
T 3gaf_A           86 QFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRM--------  157 (256)
T ss_dssp             HHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCTTC--------
T ss_pred             HcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCCCc--------
Confidence               689999999975542   233567889999999999999887    44566799999998876554332        


Q ss_pred             CCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccccc
Q 023689          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (278)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (278)
                                  ..|+.+|...+.+.+.++.+   +|+++++++||.+.++......  ............|      ..
T Consensus       158 ------------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~p------~~  217 (256)
T 3gaf_A          158 ------------ASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVL--TPEIERAMLKHTP------LG  217 (256)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHC--CHHHHHHHHTTCT------TS
T ss_pred             ------------hHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhcc--CHHHHHHHHhcCC------CC
Confidence                        57999999999999988876   4899999999999987532211  1222333333333      35


Q ss_pred             CcccHHHHHHHHHhhhcCCC--CCce-EEecCc
Q 023689          227 GAVPVKDVAKAQVLLFESPA--ASGR-YLCTNG  256 (278)
Q Consensus       227 ~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  256 (278)
                      .+.+++|+|+++++++....  ..|. +++.++
T Consensus       218 r~~~~~dva~~~~~L~s~~~~~itG~~i~vdgG  250 (256)
T 3gaf_A          218 RLGEAQDIANAALFLCSPAAAWISGQVLTVSGG  250 (256)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCCHHHHHHHHHHHcCCcccCccCCEEEECCC
Confidence            67899999999999986533  3464 445443

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.96  E-value=8.5e-28  Score=194.40  Aligned_cols=214  Identities=15%  Similarity=0.128  Sum_probs=146.9

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc------
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~------   79 (278)
                      .+++|++|||||+|+||++++++|+++|+ +|++..|+.+..    ..      ++.++.+|++|++++.++++      
T Consensus         4 ~l~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~----~~------~~~~~~~D~~d~~~~~~~~~~~~~~~   72 (250)
T 2fwm_X            4 DFSGKNVWVTGAGKGIGYATALAFVEAGA-KVTGFDQAFTQE----QY------PFATEVMDVADAAQVAQVCQRLLAET   72 (250)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCCCSS----CC------SSEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCchhhh----cC------CceEEEcCCCCHHHHHHHHHHHHHHc
Confidence            46678999999999999999999999999 899888876521    11      47889999999999988876      


Q ss_pred             -CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccCCC
Q 023689           80 -GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (278)
Q Consensus        80 -~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~  150 (278)
                       ++|+|||+||.....    ...++++..+++|+.++.++++++    ++++.++||++||..++.+.+.          
T Consensus        73 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~----------  142 (250)
T 2fwm_X           73 ERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIG----------  142 (250)
T ss_dssp             SCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTT----------
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCC----------
Confidence             689999999975432    233567889999999999998887    4556789999999777544332          


Q ss_pred             CCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHH-HHhh-CCCCcccccc
Q 023689          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQ-QLLQ-GSKDTQEYHW  225 (278)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~  225 (278)
                                ...|+.+|...+.+.+.++.+   +|+++++++||.++++....... ...... .... ..........
T Consensus       143 ----------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~  211 (250)
T 2fwm_X          143 ----------MSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWV-SDDAEEQRIRGFGEQFKLGIPL  211 (250)
T ss_dssp             ----------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC---------------------------------
T ss_pred             ----------CchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCcccccccc-ChhHHHHHHhhhhhcccccCCC
Confidence                      157999999999999888865   49999999999999986432100 000001 1100 0000000112


Q ss_pred             cCcccHHHHHHHHHhhhcCCC--CCceE
Q 023689          226 LGAVPVKDVAKAQVLLFESPA--ASGRY  251 (278)
Q Consensus       226 ~~~i~~~D~a~~~~~~~~~~~--~~~~~  251 (278)
                      ..+.+++|+|+++++++....  ..|..
T Consensus       212 ~~~~~p~dvA~~v~~l~s~~~~~~tG~~  239 (250)
T 2fwm_X          212 GKIARPQEIANTILFLASDLASHITLQD  239 (250)
T ss_dssp             ----CHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             CCCcCHHHHHHHHHHHhCccccCCCCCE
Confidence            357899999999999987643  34644

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.96  E-value=6.5e-29  Score=202.94  Aligned_cols=216  Identities=18%  Similarity=0.156  Sum_probs=160.8

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCC-CCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG-SDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~-~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~----   79 (278)
                      .+++|++|||||+|+||++++++|+++|+ .|++..|+. +..+.+. .+.... .++.++.+|++|+++++++++    
T Consensus        25 ~l~~k~vlVTGas~gIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~d~~~v~~~~~~~~~  102 (269)
T 4dmm_A           25 PLTDRIALVTGASRGIGRAIALELAAAGA-KVAVNYASSAGAADEVVAAIAAAG-GEAFAVKADVSQESEVEALFAAVIE  102 (269)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTT-CCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHHHHHHHHH
Confidence            46789999999999999999999999999 787777743 2222211 111111 278999999999999888876    


Q ss_pred             ---CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccC
Q 023689           80 ---GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (278)
Q Consensus        80 ---~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E  148 (278)
                         ++|++||+||.....    ...++++..+++|+.++.++++++    ++++.++||++||..+..+.+..       
T Consensus       103 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------  175 (269)
T 4dmm_A          103 RWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQ-------  175 (269)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCTTC-------
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCc-------
Confidence               689999999976542    234567889999999999988877    44566799999998887665442       


Q ss_pred             CCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccc
Q 023689          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (278)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (278)
                                   ..|+.+|.+.+.+.+.++.+   +|+++++++||.|.++.....      .........|      .
T Consensus       176 -------------~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~------~~~~~~~~~p------~  230 (269)
T 4dmm_A          176 -------------ANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSEL------AAEKLLEVIP------L  230 (269)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHH------HHHHHGGGCT------T
T ss_pred             -------------hhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccc------cHHHHHhcCC------C
Confidence                         57999999999888888865   589999999999999864321      1122333332      4


Q ss_pred             cCcccHHHHHHHHHhhhcCCC---CCce-EEecC
Q 023689          226 LGAVPVKDVAKAQVLLFESPA---ASGR-YLCTN  255 (278)
Q Consensus       226 ~~~i~~~D~a~~~~~~~~~~~---~~~~-~~~~~  255 (278)
                      ..+.+++|+|+++++++.++.   ..|. +++.+
T Consensus       231 ~r~~~~~dvA~~v~~l~s~~~~~~itG~~i~vdG  264 (269)
T 4dmm_A          231 GRYGEAAEVAGVVRFLAADPAAAYITGQVINIDG  264 (269)
T ss_dssp             SSCBCHHHHHHHHHHHHHCGGGGGCCSCEEEEST
T ss_pred             CCCCCHHHHHHHHHHHhCCcccCCCcCCEEEECC
Confidence            567899999999999998743   2364 44443

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.96  E-value=1.3e-29  Score=203.44  Aligned_cols=229  Identities=14%  Similarity=0.085  Sum_probs=163.1

Q ss_pred             CccccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccc-ccCCCCCCCceEEEEccCCChhhHHHHhc
Q 023689            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL-FALPGAGDANLRVFEADVLDSGAVSRAVE   79 (278)
Q Consensus         1 m~~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~-~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~   79 (278)
                      |..|.++++|++|||||+++||+++++.|.++|+ .|++..|+.+..+.. ..+...+. ++..+++|++|+++++++++
T Consensus         1 Ms~~f~L~gKvalVTGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~l~~~g~-~~~~~~~Dv~~~~~v~~~~~   78 (255)
T 4g81_D            1 MTALFDLTGKTALVTGSARGLGFAYAEGLAAAGA-RVILNDIRATLLAESVDTLTRKGY-DAHGVAFDVTDELAIEAAFS   78 (255)
T ss_dssp             --CTTCCTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTC-CEEECCCCTTCHHHHHHHHH
T ss_pred             CCCCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCC-cEEEEEeeCCCHHHHHHHHH
Confidence            6778789999999999999999999999999999 888888876543322 22222222 78999999999999888875


Q ss_pred             -------CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHH----Hh-cCCCEEEEecceeeeecCCCCCC
Q 023689           80 -------GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KR-FGVRRVVVTSSISAIVPNPGWKG  143 (278)
Q Consensus        80 -------~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~----~~-~~~~~~v~~Ss~~~~~~~~~~~~  143 (278)
                             ++|++|||||....    +...++|+..+++|+.++..+.+++    .+ .+.+++|++||..+..+.++.  
T Consensus        79 ~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~~--  156 (255)
T 4g81_D           79 KLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTV--  156 (255)
T ss_dssp             HHHHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTTC--
T ss_pred             HHHHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCCc--
Confidence                   57999999997654    2344688999999999988877765    33 345799999998887665543  


Q ss_pred             ccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHH---hcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCc
Q 023689          144 KVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT  220 (278)
Q Consensus       144 ~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~  220 (278)
                                        ..|+.+|.....+.+.++.   ++||++++|.||.|.++...... ........+....|  
T Consensus       157 ------------------~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~-~~~~~~~~~~~~~P--  215 (255)
T 4g81_D          157 ------------------APYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALI-EDKQFDSWVKSSTP--  215 (255)
T ss_dssp             ------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHH-TCHHHHHHHHHHST--
T ss_pred             ------------------hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhccc-CCHHHHHHHHhCCC--
Confidence                              3567777666666666654   46999999999999988543211 01122222333333  


Q ss_pred             ccccccCcccHHHHHHHHHhhhcCCC--CCceEEecCccc
Q 023689          221 QEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLCTNGIY  258 (278)
Q Consensus       221 ~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~~~~  258 (278)
                          ...+..++|+|.+++++.....  -.|+.+..++.+
T Consensus       216 ----l~R~g~pediA~~v~fL~S~~a~~iTG~~i~VDGG~  251 (255)
T 4g81_D          216 ----SQRWGRPEELIGTAIFLSSKASDYINGQIIYVDGGW  251 (255)
T ss_dssp             ----TCSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             ----CCCCcCHHHHHHHHHHHhCchhCCCcCCEEEECCCe
Confidence                3456789999999999886433  356655444433

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.96  E-value=4.8e-29  Score=203.25  Aligned_cols=223  Identities=17%  Similarity=0.104  Sum_probs=160.5

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      .+++|++|||||+|+||++++++|+++|+ .|++..|+.+..+... .+......++.++.+|++|++++.++++     
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (263)
T 3ai3_A            4 GISGKVAVITGSSSGIGLAIAEGFAKEGA-HIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSS   82 (263)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            35679999999999999999999999999 8998888764332221 1110001178899999999999988876     


Q ss_pred             --CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHH----hcCCCEEEEecceeeeecCCCCCCccccCC
Q 023689           80 --GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (278)
Q Consensus        80 --~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~  149 (278)
                        ++|+|||+||.....    ...++++..+++|+.++.++++++.    +++.++||++||..++.+.+..        
T Consensus        83 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------  154 (263)
T 3ai3_A           83 FGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYE--------  154 (263)
T ss_dssp             HSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTC--------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCc--------
Confidence              789999999975432    2334678889999999988888773    4567899999998776543321        


Q ss_pred             CCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCc--------hhHHHHHHHhhC-C
Q 023689          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN--------ASCAVLQQLLQG-S  217 (278)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~--------~~~~~~~~~~~~-~  217 (278)
                                  ..|+.+|...+.+.+.++.+   +|++++++|||.++|+.......        ............ .
T Consensus       155 ------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (263)
T 3ai3_A          155 ------------PIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHA  222 (263)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHC
T ss_pred             ------------chHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCC
Confidence                        57999999999999888876   69999999999999985321100        011112222222 2


Q ss_pred             CCcccccccCcccHHHHHHHHHhhhcCCC--CCc-eEEecC
Q 023689          218 KDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASG-RYLCTN  255 (278)
Q Consensus       218 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~  255 (278)
                      |      ...+++++|+|+++++++..+.  ..| .+++.+
T Consensus       223 p------~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~vdg  257 (263)
T 3ai3_A          223 P------IKRFASPEELANFFVFLCSERATYSVGSAYFVDG  257 (263)
T ss_dssp             T------TCSCBCHHHHHHHHHHHTSTTCTTCCSCEEEEST
T ss_pred             C------CCCCcCHHHHHHHHHHHcCccccCCCCcEEEECC
Confidence            2      3568999999999999987543  235 455543

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.96  E-value=1.3e-28  Score=199.75  Aligned_cols=221  Identities=18%  Similarity=0.190  Sum_probs=157.4

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc-------
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------   79 (278)
                      +++|++|||||+|+||++++++|+++|+ .|++..|+.+ ......+.... .++.++.+|++|++++.++++       
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~-~~~~~~l~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g   78 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARAGA-NIVLNGFGDP-APALAEIARHG-VKAVHHPADLSDVAQIEALFALAEREFG   78 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEECSSCC-HHHHHHHHTTS-CCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCch-HHHHHHHHhcC-CceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            3578999999999999999999999999 8988888765 21112221111 268899999999999998887       


Q ss_pred             CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHH----HHhcCCCEEEEecceeeeecCCCCCCccccCCCC
Q 023689           80 GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEA----AKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (278)
Q Consensus        80 ~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~----~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~  151 (278)
                      ++|+|||+||.....    ...++++..+++|+.++.++.++    +++++.++||++||..++.+.+..          
T Consensus        79 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----------  148 (255)
T 2q2v_A           79 GVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGK----------  148 (255)
T ss_dssp             SCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTB----------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCCCc----------
Confidence            789999999975431    23356788999999876665554    466677899999998776543321          


Q ss_pred             CchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHH---H----HHH-hhCCCCc
Q 023689          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAV---L----QQL-LQGSKDT  220 (278)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~---~----~~~-~~~~~~~  220 (278)
                                ..|+.+|...+.+.+.++.+   +|+++++++||.++++............   .    ... ....   
T Consensus       149 ----------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  215 (255)
T 2q2v_A          149 ----------AAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQ---  215 (255)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTTC---
T ss_pred             ----------hhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhccC---
Confidence                      57999999999999888876   4899999999999998532110000000   0    111 1111   


Q ss_pred             ccccccCcccHHHHHHHHHhhhcCCC--CCce-EEecCc
Q 023689          221 QEYHWLGAVPVKDVAKAQVLLFESPA--ASGR-YLCTNG  256 (278)
Q Consensus       221 ~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  256 (278)
                         ....+++++|+|+++++++....  ..|. +.+.++
T Consensus       216 ---p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG  251 (255)
T 2q2v_A          216 ---PSLAFVTPEHLGELVLFLCSEAGSQVRGAAWNVDGG  251 (255)
T ss_dssp             ---TTCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             ---CCCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECCC
Confidence               24568999999999999987543  2354 444443

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.96  E-value=2e-28  Score=197.76  Aligned_cols=219  Identities=16%  Similarity=0.121  Sum_probs=149.2

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEE-ecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINAT-VFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~-~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      +++|++|||||+|+||++++++|+++|+ .|+++ .|+++..+... .+.... .++.++.+|++|++++.++++     
T Consensus         3 l~~~~vlItGasggiG~~~a~~l~~~G~-~V~~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (247)
T 2hq1_A            3 LKGKTAIVTGSSRGLGKAIAWKLGNMGA-NIVLNGSPASTSLDATAEEFKAAG-INVVVAKGDVKNPEDVENMVKTAMDA   80 (247)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECTTCSHHHHHHHHHHHTT-CCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCcCHHHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHHHHHHHHHh
Confidence            5678999999999999999999999999 88887 55544322221 111111 278999999999999988876     


Q ss_pred             --CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHHH----hcCCCEEEEecceeeeecCCCCCCccccCC
Q 023689           80 --GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (278)
Q Consensus        80 --~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~  149 (278)
                        ++|+|||+||....    +...++++..+++|+.++.++++++.    +.+.++||++||..+.++.+..        
T Consensus        81 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~--------  152 (247)
T 2hq1_A           81 FGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQ--------  152 (247)
T ss_dssp             HSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC---------C--------
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCC--------
Confidence              78999999997543    22345678999999999888887764    3567899999998776654332        


Q ss_pred             CCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccccc
Q 023689          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (278)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (278)
                                  ..|+.+|.+.+.+.+.++.+.   ++++++++||.+.++.....   ..........+.+      ..
T Consensus       153 ------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~------~~  211 (247)
T 2hq1_A          153 ------------ANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVL---PDKVKEMYLNNIP------LK  211 (247)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS---CHHHHHHHHTTST------TS
T ss_pred             ------------cHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhc---chHHHHHHHhhCC------CC
Confidence                        579999999999999888654   89999999999988743221   1222223333333      34


Q ss_pred             CcccHHHHHHHHHhhhcCCC--CCc-eEEecCc
Q 023689          227 GAVPVKDVAKAQVLLFESPA--ASG-RYLCTNG  256 (278)
Q Consensus       227 ~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  256 (278)
                      .+++++|+|++++.++..+.  ..| .++++++
T Consensus       212 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  244 (247)
T 2hq1_A          212 RFGTPEEVANVVGFLASDDSNYITGQVINIDGG  244 (247)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCCHHHHHHHHHHHcCcccccccCcEEEeCCC
Confidence            68899999999999887542  245 4555543

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.96  E-value=2e-28  Score=197.43  Aligned_cols=226  Identities=20%  Similarity=0.182  Sum_probs=162.0

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc------
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~------   79 (278)
                      ++++|++|||||+++||+++++.|.++|+ .|++..|+.+.......+..... ++.++.+|++|+++++++++      
T Consensus         4 ~L~gKvalVTGas~GIG~aia~~la~~Ga-~Vv~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~v~~~~~~~   81 (258)
T 4gkb_A            4 NLQDKVVIVTGGASGIGGAISMRLAEERA-IPVVFARHAPDGAFLDALAQRQP-RATYLPVELQDDAQCRDAVAQTIATF   81 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCCHHHHHHHHHHCT-TCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCcccHHHHHHHHhcCC-CEEEEEeecCCHHHHHHHHHHHHHHh
Confidence            68899999999999999999999999999 88888887765443333222222 78999999999998888765      


Q ss_pred             -CccEEEEecccCCC---CCCCCchhhhhhhHHhHHHHHHHHHH----hcCCCEEEEecceeeeecCCCCCCccccCCCC
Q 023689           80 -GCKGVFHVASPCTL---EDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (278)
Q Consensus        80 -~~d~vi~~a~~~~~---~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~  151 (278)
                       ++|++|||||....   +...++|+..+++|+.++..+.+++.    +.+ +++|++||..+..+.++.          
T Consensus        82 G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~~~~~~~----------  150 (258)
T 4gkb_A           82 GRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATR-GAIVNISSKTAVTGQGNT----------  150 (258)
T ss_dssp             SCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTHHHHCCSSC----------
T ss_pred             CCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEeehhhccCCCCc----------
Confidence             57999999997543   33345788999999999888877663    334 789999999887766553          


Q ss_pred             CchhhhhccCchhhhHHHHHHHHHHHHHH---hcCCceEEEecceeeCCCCCCCCc---hhHHHHHHHhhCCCCcccccc
Q 023689          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLN---ASCAVLQQLLQGSKDTQEYHW  225 (278)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lrp~~i~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~  225 (278)
                                ..|+.+|.....+.+.++.   ++||++++|.||.|.++.......   .............|.     .
T Consensus       151 ----------~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl-----g  215 (258)
T 4gkb_A          151 ----------SGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPL-----G  215 (258)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTT-----T
T ss_pred             ----------hHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCC-----C
Confidence                      3566666666666666654   469999999999999987544311   112223333333332     2


Q ss_pred             cCcccHHHHHHHHHhhhcCCC--CCceEEecCcccc
Q 023689          226 LGAVPVKDVAKAQVLLFESPA--ASGRYLCTNGIYQ  259 (278)
Q Consensus       226 ~~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~~~~s  259 (278)
                      +.+..++|+|+++++++....  -.|+.+..++.+|
T Consensus       216 ~R~g~peeiA~~v~fLaS~~a~~iTG~~i~VDGG~T  251 (258)
T 4gkb_A          216 RRFTTPDEIADTAVFLLSPRASHTTGEWLFVDGGYT  251 (258)
T ss_dssp             TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             CCCcCHHHHHHHHHHHhCchhcCccCCeEEECCCcc
Confidence            457789999999999986543  3576655555544

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.96  E-value=1.7e-28  Score=199.73  Aligned_cols=224  Identities=16%  Similarity=0.113  Sum_probs=159.3

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEec-CCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc--
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVF-PGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE--   79 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r-~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--   79 (278)
                      |+.+++|++|||||+|+||++++++|+++|+ .|++..| +.+..+.+. .+.... .++.++.+|++|++++.++++  
T Consensus         2 ~~~l~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~~   79 (261)
T 1gee_A            2 YKDLEGKVVVITGSSTGLGKSMAIRFATEKA-KVVVNYRSKEDEANSVLEEIKKVG-GEAIAVKGDVTVESDVINLVQSA   79 (261)
T ss_dssp             CGGGTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTT-CEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEcCCChHHHHHHHHHHHhcC-CceEEEECCCCCHHHHHHHHHHH
Confidence            4456789999999999999999999999999 8888888 443222211 111111 178899999999999888876  


Q ss_pred             -----CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHh----cC-CCEEEEecceeeeecCCCCCCcc
Q 023689           80 -----GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FG-VRRVVVTSSISAIVPNPGWKGKV  145 (278)
Q Consensus        80 -----~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~----~~-~~~~v~~Ss~~~~~~~~~~~~~~  145 (278)
                           ++|+|||+||.....    ...++++..+++|+.++.++++++.+    ++ .++||++||..+..+.+.     
T Consensus        80 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-----  154 (261)
T 1gee_A           80 IKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPL-----  154 (261)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTT-----
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCCC-----
Confidence                 789999999975431    23346678999999999988877643    34 679999999766543222     


Q ss_pred             ccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccc
Q 023689          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQE  222 (278)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (278)
                                     ...|+.+|.+.+.+.+.++.+.   |++++++|||.++|+...... .............+    
T Consensus       155 ---------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~----  214 (261)
T 1gee_A          155 ---------------FVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKF-ADPEQRADVESMIP----  214 (261)
T ss_dssp             ---------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHH-HSHHHHHHHHTTCT----
T ss_pred             ---------------ccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcc-cChhHHHHHHhcCC----
Confidence                           2579999999999888887654   899999999999998642210 01122222222222    


Q ss_pred             ccccCcccHHHHHHHHHhhhcCCC--CCce-EEecCc
Q 023689          223 YHWLGAVPVKDVAKAQVLLFESPA--ASGR-YLCTNG  256 (278)
Q Consensus       223 ~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  256 (278)
                        ...+++++|+|+++++++....  ..|. +.+.++
T Consensus       215 --~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg  249 (261)
T 1gee_A          215 --MGYIGEPEEIAAVAAWLASSEASYVTGITLFADGG  249 (261)
T ss_dssp             --TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             --CCCCcCHHHHHHHHHHHhCccccCCCCcEEEEcCC
Confidence              3467899999999999986532  3454 444443

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.96  E-value=2.5e-28  Score=200.46  Aligned_cols=220  Identities=18%  Similarity=0.172  Sum_probs=157.2

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEec-CCCCCcccc-cCCCCCCCceEEEEccCCCh----hhHHHHhc
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVF-PGSDSSHLF-ALPGAGDANLRVFEADVLDS----GAVSRAVE   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r-~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~----~~~~~~~~   79 (278)
                      .+++|++|||||+|+||++++++|+++|+ .|++..| +.+..+.+. .+......++.++.+|++|+    +++.++++
T Consensus         8 ~~~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   86 (276)
T 1mxh_A            8 ASECPAAVITGGARRIGHSIAVRLHQQGF-RVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIID   86 (276)
T ss_dssp             ---CCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHH
Confidence            45578999999999999999999999999 8888888 543322221 11000011788999999999    88888776


Q ss_pred             -------CccEEEEecccCCCC----CCC-----------CchhhhhhhHHhHHHHHHHHHHhc---CC------CEEEE
Q 023689           80 -------GCKGVFHVASPCTLE----DPV-----------DPEKELILPAVQGTLNVLEAAKRF---GV------RRVVV  128 (278)
Q Consensus        80 -------~~d~vi~~a~~~~~~----~~~-----------~~~~~~~~~n~~~~~~ll~~~~~~---~~------~~~v~  128 (278)
                             ++|+|||+||.....    ...           +.++..+++|+.++.++++++.+.   +.      ++||+
T Consensus        87 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~  166 (276)
T 1mxh_A           87 CSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVN  166 (276)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEE
T ss_pred             HHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEE
Confidence                   689999999975432    122           556789999999999999998763   34      79999


Q ss_pred             ecceeeeecCCCCCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCch
Q 023689          129 TSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNA  205 (278)
Q Consensus       129 ~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~~  205 (278)
                      +||..++.+.+..                    ..|+.+|...+.+.+.++.+.   |+++++++||.++++ . ..   
T Consensus       167 isS~~~~~~~~~~--------------------~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~-~~---  221 (276)
T 1mxh_A          167 LCDAMTDLPLPGF--------------------CVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-P-AM---  221 (276)
T ss_dssp             ECCGGGGSCCTTC--------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-S-SS---
T ss_pred             ECchhhcCCCCCC--------------------eehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-c-cC---
Confidence            9998876554332                    579999999999998888654   899999999999999 2 11   


Q ss_pred             hHHHHHHHhhCCCCcccccccCcccHHHHHHHHHhhhcCCCC--Cce-EEecCc
Q 023689          206 SCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAA--SGR-YLCTNG  256 (278)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~~-~~~~~~  256 (278)
                      ............|.     .+++.+++|+|+++++++.....  .|. +.+.++
T Consensus       222 ~~~~~~~~~~~~p~-----~r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG  270 (276)
T 1mxh_A          222 PQETQEEYRRKVPL-----GQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGG  270 (276)
T ss_dssp             CHHHHHHHHTTCTT-----TSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CHHHHHHHHhcCCC-----CCCCCCHHHHHHHHHHHhCccccCccCcEEEECCc
Confidence            12233333333322     22388999999999999875332  464 444443

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.96  E-value=2e-28  Score=198.94  Aligned_cols=220  Identities=18%  Similarity=0.144  Sum_probs=161.8

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEE-ecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc------
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINAT-VFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~-~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~------   79 (278)
                      ++|++|||||+|+||++++++|+++|+ .|++. .|+.+..+... .+.... .++.++.+|++|+++++++++      
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~-~vv~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGY-NIVINYARSKKAALETAEEIEKLG-VKVLVVKANVGQPAKIKEMFQQIDETF   80 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTT-CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            468999999999999999999999999 77765 66554332221 111112 278999999999999888876      


Q ss_pred             -CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccCCC
Q 023689           80 -GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (278)
Q Consensus        80 -~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~  150 (278)
                       ++|++||+||....    +...++++..+++|+.++.++++++    ++++.++||++||..++.+.+..         
T Consensus        81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~---------  151 (258)
T 3oid_A           81 GRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENY---------  151 (258)
T ss_dssp             SCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCTTC---------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCCCc---------
Confidence             56999999986443    2233567888999999999988877    45566799999998776554332         


Q ss_pred             CCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccC
Q 023689          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (278)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (278)
                                 ..|+.+|.+.+.+.+.++.+.   |+++++++||.+.++....... ............|      ...
T Consensus       152 -----------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~p------~~r  213 (258)
T 3oid_A          152 -----------TTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPN-REDLLEDARQNTP------AGR  213 (258)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTT-HHHHHHHHHHHCT------TSS
T ss_pred             -----------HHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhccc-CHHHHHHHHhcCC------CCC
Confidence                       579999999999999988764   8999999999999986543321 1223333333333      356


Q ss_pred             cccHHHHHHHHHhhhcCCC--CCce-EEecCc
Q 023689          228 AVPVKDVAKAQVLLFESPA--ASGR-YLCTNG  256 (278)
Q Consensus       228 ~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  256 (278)
                      +.+++|+|+++++++....  ..|. +.+.++
T Consensus       214 ~~~~~dva~~v~~L~s~~~~~itG~~i~vdGG  245 (258)
T 3oid_A          214 MVEIKDMVDTVEFLVSSKADMIRGQTIIVDGG  245 (258)
T ss_dssp             CBCHHHHHHHHHHHTSSTTTTCCSCEEEESTT
T ss_pred             CcCHHHHHHHHHHHhCcccCCccCCEEEECCC
Confidence            7899999999999987643  3464 444443

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.96  E-value=2.5e-28  Score=197.11  Aligned_cols=218  Identities=15%  Similarity=0.091  Sum_probs=158.8

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc---C
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---G   80 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---~   80 (278)
                      |..+++|++|||||+|+||++++++|+++|+ .|++..|+.+..+.+..+    . ++.++.+|++|+++++++++   +
T Consensus         1 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~----~-~~~~~~~D~~~~~~~~~~~~~~~~   74 (246)
T 2ag5_A            1 MGRLDGKVIILTAAAQGIGQAAALAFAREGA-KVIATDINESKLQELEKY----P-GIQTRVLDVTKKKQIDQFANEVER   74 (246)
T ss_dssp             CCTTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHGGGGGS----T-TEEEEECCTTCHHHHHHHHHHCSC
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhc----c-CceEEEeeCCCHHHHHHHHHHhCC
Confidence            3446679999999999999999999999999 899998876543333221    1 68899999999998887754   6


Q ss_pred             ccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHH----hcCCCEEEEecceeeeecCCCCCCccccCCCCC
Q 023689           81 CKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (278)
Q Consensus        81 ~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~  152 (278)
                      +|+|||+||.....    ...++++..+++|+.++.++++++.    +++.+++|++||..+..+.+.            
T Consensus        75 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------  142 (246)
T 2ag5_A           75 LDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVV------------  142 (246)
T ss_dssp             CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCT------------
T ss_pred             CCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCCC------------
Confidence            89999999975431    2234678889999999999888874    446789999999776544320            


Q ss_pred             chhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCC---chhHHHHHHHhhCCCCccccccc
Q 023689          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYL---NASCAVLQQLLQGSKDTQEYHWL  226 (278)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~  226 (278)
                             ....|+.+|...+.+.+.++.+   +|++++++|||.++|+......   ..............+      ..
T Consensus       143 -------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~------~~  209 (246)
T 2ag5_A          143 -------NRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQK------TG  209 (246)
T ss_dssp             -------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCT------TS
T ss_pred             -------CCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCC------CC
Confidence                   1157999999999999988865   4999999999999998532100   001122222322222      24


Q ss_pred             CcccHHHHHHHHHhhhcCCC--CCceEE
Q 023689          227 GAVPVKDVAKAQVLLFESPA--ASGRYL  252 (278)
Q Consensus       227 ~~i~~~D~a~~~~~~~~~~~--~~~~~~  252 (278)
                      .+.+++|+|+++++++....  ..|..+
T Consensus       210 ~~~~~~dvA~~v~~l~s~~~~~~tG~~i  237 (246)
T 2ag5_A          210 RFATAEEIAMLCVYLASDESAYVTGNPV  237 (246)
T ss_dssp             SCEEHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             CCCCHHHHHHHHHHHhCccccCCCCCEE
Confidence            57899999999999986543  346543

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.96  E-value=3.9e-28  Score=201.02  Aligned_cols=226  Identities=13%  Similarity=0.046  Sum_probs=167.5

Q ss_pred             CccccccCCceEEEeCcch--hhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHh
Q 023689            1 MASEAEKEEETVCVTGANG--FIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAV   78 (278)
Q Consensus         1 m~~m~~~~~~~vlItGatG--~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~   78 (278)
                      |..|+.+++|++|||||+|  +||++++++|+++|+ .|++..|+.+..+.+..+..... .+.++++|++|++++++++
T Consensus        22 m~~~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~   99 (296)
T 3k31_A           22 MRTGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGA-EVALTYLSETFKKRVDPLAESLG-VKLTVPCDVSDAESVDNMF   99 (296)
T ss_dssp             CCCCCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHHT-CCEEEECCTTCHHHHHHHH
T ss_pred             ccchhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcC-CeEEEEcCCCCHHHHHHHH
Confidence            4556677889999999997  999999999999999 89888887543333322211111 5689999999999998887


Q ss_pred             c-------CccEEEEecccCCC--------CCCCCchhhhhhhHHhHHHHHHHHHHhc--CCCEEEEecceeeeecCCCC
Q 023689           79 E-------GCKGVFHVASPCTL--------EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGW  141 (278)
Q Consensus        79 ~-------~~d~vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~Ss~~~~~~~~~~  141 (278)
                      +       ++|++|||||....        +...++++..+++|+.++.++++++...  ..++||++||..+..+.+..
T Consensus       100 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~~~~  179 (296)
T 3k31_A          100 KVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVVPHY  179 (296)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTTT
T ss_pred             HHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCCCCc
Confidence            6       57999999997542        2334577899999999999999999764  24589999998876554332


Q ss_pred             CCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCC
Q 023689          142 KGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSK  218 (278)
Q Consensus       142 ~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~  218 (278)
                                          ..|+.||.+.+.+.+.++.+.   |+++++++||.|.++..... ..............|
T Consensus       180 --------------------~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~p  238 (296)
T 3k31_A          180 --------------------NVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGI-SDFHYILTWNKYNSP  238 (296)
T ss_dssp             --------------------THHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSC-HHHHHHHHHHHHHST
T ss_pred             --------------------hhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcc-cchHHHHHHHHhcCC
Confidence                                579999999999988888654   89999999999999875443 112222333333333


Q ss_pred             CcccccccCcccHHHHHHHHHhhhcCCC--CCceE-EecC
Q 023689          219 DTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRY-LCTN  255 (278)
Q Consensus       219 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~-~~~~  255 (278)
                            ...+..++|+|+++++++....  ..|.. .+.+
T Consensus       239 ------~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdG  272 (296)
T 3k31_A          239 ------LRRNTTLDDVGGAALYLLSDLGRGTTGETVHVDC  272 (296)
T ss_dssp             ------TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             ------CCCCCCHHHHHHHHHHHcCCccCCccCCEEEECC
Confidence                  3457899999999999987533  34654 4433

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.96  E-value=2.3e-28  Score=200.36  Aligned_cols=220  Identities=14%  Similarity=0.101  Sum_probs=159.6

Q ss_pred             CccccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc
Q 023689            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE   79 (278)
Q Consensus         1 m~~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~   79 (278)
                      |..|+.+++|++|||||+|+||++++++|+++|+ .|++..|+.+..+... .+.. .. ++.++.+|++|+++++++++
T Consensus        21 ~~~~~~l~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~-~~-~~~~~~~Dv~d~~~v~~~~~   97 (276)
T 2b4q_A           21 MHPYFSLAGRIALVTGGSRGIGQMIAQGLLEAGA-RVFICARDAEACADTATRLSA-YG-DCQAIPADLSSEAGARRLAQ   97 (276)
T ss_dssp             CCTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHTT-SS-CEEECCCCTTSHHHHHHHHH
T ss_pred             cccccCCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHh-cC-ceEEEEeeCCCHHHHHHHHH
Confidence            3445567789999999999999999999999999 8988888764432221 2211 12 68889999999999888876


Q ss_pred             -------CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHHH----hcCC----CEEEEecceeeeecCCC
Q 023689           80 -------GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAK----RFGV----RRVVVTSSISAIVPNPG  140 (278)
Q Consensus        80 -------~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~----~~~v~~Ss~~~~~~~~~  140 (278)
                             ++|+|||+||....    +...++++..+++|+.++.++++++.    +++.    ++||++||..++.+.+.
T Consensus        98 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~~  177 (276)
T 2b4q_A           98 ALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGE  177 (276)
T ss_dssp             HHHHHCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCCC
T ss_pred             HHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCCC
Confidence                   68999999997543    22345678899999999987777663    4444    79999999877654332


Q ss_pred             CCCccccCCCCCchhhhhccCc-hhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhh-
Q 023689          141 WKGKVFDETSWTDLEYCKSRKK-WYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQ-  215 (278)
Q Consensus       141 ~~~~~~~E~~~~~~~~~~~~~~-~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~-  215 (278)
                      .                    . .|+.+|.+.+.+.+.++.+   +|+++++++||.+.++.....   .......... 
T Consensus       178 ~--------------------~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~  234 (276)
T 2b4q_A          178 Q--------------------AYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHI---ANDPQALEADS  234 (276)
T ss_dssp             S--------------------CTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHH---HHCHHHHHHHH
T ss_pred             C--------------------ccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhc---chhHHHHHHhh
Confidence            1                    4 7999999999999888865   489999999999998863221   0011111211 


Q ss_pred             -CCCCcccccccCcccHHHHHHHHHhhhcCCC--CCceEE
Q 023689          216 -GSKDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYL  252 (278)
Q Consensus       216 -~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~  252 (278)
                       ..|      ...+.+++|+|+++++++....  ..|..+
T Consensus       235 ~~~p------~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i  268 (276)
T 2b4q_A          235 ASIP------MGRWGRPEEMAALAISLAGTAGAYMTGNVI  268 (276)
T ss_dssp             HTST------TSSCCCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             cCCC------CCCcCCHHHHHHHHHHHhCccccCCCCCEE
Confidence             222      3457899999999999987542  346443

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.96  E-value=4.8e-28  Score=197.54  Aligned_cols=218  Identities=18%  Similarity=0.124  Sum_probs=159.5

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc------
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~------   79 (278)
                      .+++|++|||||+|+||++++++|+++|+ .|+++.|+.+..+......  . .++.++.+|++|+++++++++      
T Consensus         9 ~~~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~--~-~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (265)
T 2o23_A            9 SVKGLVAVITGGASGLGLATAERLVGQGA-SAVLLDLPNSGGEAQAKKL--G-NNCVFAPADVTSEKDVQTALALAKGKF   84 (265)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSSHHHHHHHH--C-TTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCcHhHHHHHHHh--C-CceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence            46678999999999999999999999999 8999998776543322110  1 178999999999999998887      


Q ss_pred             -CccEEEEecccCCCC----------CCCCchhhhhhhHHhHHHHHHHHHHhc----------CCCEEEEecceeeeecC
Q 023689           80 -GCKGVFHVASPCTLE----------DPVDPEKELILPAVQGTLNVLEAAKRF----------GVRRVVVTSSISAIVPN  138 (278)
Q Consensus        80 -~~d~vi~~a~~~~~~----------~~~~~~~~~~~~n~~~~~~ll~~~~~~----------~~~~~v~~Ss~~~~~~~  138 (278)
                       ++|+|||+||.....          ...+.++..+++|+.++.++++++.+.          +.++||++||..++.+.
T Consensus        85 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~  164 (265)
T 2o23_A           85 GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ  164 (265)
T ss_dssp             SCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC
T ss_pred             CCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCC
Confidence             789999999975432          123457889999999999999988654          56789999998776543


Q ss_pred             CCCCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhh
Q 023689          139 PGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQ  215 (278)
Q Consensus       139 ~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~  215 (278)
                      +..                    ..|+.+|.+.+.+.+.++.+   .|+++++++||.+.++......   .........
T Consensus       165 ~~~--------------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~~~~~~~~  221 (265)
T 2o23_A          165 VGQ--------------------AAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLP---EKVCNFLAS  221 (265)
T ss_dssp             TTC--------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-------------CHHHH
T ss_pred             CCC--------------------chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccC---HHHHHHHHH
Confidence            321                    57999999999888888765   4899999999999988643211   011111111


Q ss_pred             CCCCcccccccCcccHHHHHHHHHhhhcCCCCCce-EEecC
Q 023689          216 GSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGR-YLCTN  255 (278)
Q Consensus       216 ~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~-~~~~~  255 (278)
                      ..+.     ...+++++|+|+++++++.+....|. +.+.+
T Consensus       222 ~~~~-----~~~~~~~~dva~~~~~l~~~~~~~G~~i~vdg  257 (265)
T 2o23_A          222 QVPF-----PSRLGDPAEYAHLVQAIIENPFLNGEVIRLDG  257 (265)
T ss_dssp             TCSS-----SCSCBCHHHHHHHHHHHHHCTTCCSCEEEEST
T ss_pred             cCCC-----cCCCCCHHHHHHHHHHHhhcCccCceEEEECC
Confidence            1111     14578999999999999987655674 44433

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.96  E-value=8.9e-28  Score=193.28  Aligned_cols=206  Identities=22%  Similarity=0.161  Sum_probs=157.1

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc------Ccc
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------GCK   82 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~------~~d   82 (278)
                      +|++|||||+|+||++++++|+++|+ +|+++.|+.+ .+           ++.++++|++|++++.++++      ++|
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~-~~-----------~~~~~~~D~~~~~~~~~~~~~~~~~~~~d   68 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGY-RVVVLDLRRE-GE-----------DLIYVEGDVTREEDVRRAVARAQEEAPLF   68 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCC-SS-----------SSEEEECCTTCHHHHHHHHHHHHHHSCEE
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEccCcc-cc-----------ceEEEeCCCCCHHHHHHHHHHHHhhCCce
Confidence            57999999999999999999999999 8999988764 11           56889999999999999887      789


Q ss_pred             EEEEecccCCCCCC----CC----chhhhhhhHHhHHHHHHHHHHhc----C------CCEEEEecceeeeecCCCCCCc
Q 023689           83 GVFHVASPCTLEDP----VD----PEKELILPAVQGTLNVLEAAKRF----G------VRRVVVTSSISAIVPNPGWKGK  144 (278)
Q Consensus        83 ~vi~~a~~~~~~~~----~~----~~~~~~~~n~~~~~~ll~~~~~~----~------~~~~v~~Ss~~~~~~~~~~~~~  144 (278)
                      ++||+||.......    .+    +++..+++|+.++.++++++.+.    +      .++||++||..++.+.+..   
T Consensus        69 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~---  145 (242)
T 1uay_A           69 AVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQ---  145 (242)
T ss_dssp             EEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTC---
T ss_pred             EEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCC---
Confidence            99999997554211    12    67889999999999999988653    1      1389999998776543321   


Q ss_pred             cccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcc
Q 023689          145 VFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ  221 (278)
Q Consensus       145 ~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~  221 (278)
                                       ..|+.+|...+.+.+.++.+   +|++++++|||.++|+......   ...........+.  
T Consensus       146 -----------------~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~~~~~~~~~~~~--  203 (242)
T 1uay_A          146 -----------------AAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLP---EKAKASLAAQVPF--  203 (242)
T ss_dssp             -----------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSC---HHHHHHHHTTCCS--
T ss_pred             -----------------chhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccc---hhHHHHHHhhCCC--
Confidence                             57999999999998888765   3999999999999998643321   2222333333332  


Q ss_pred             cccccCcccHHHHHHHHHhhhcCCCCCce-EEecC
Q 023689          222 EYHWLGAVPVKDVAKAQVLLFESPAASGR-YLCTN  255 (278)
Q Consensus       222 ~~~~~~~i~~~D~a~~~~~~~~~~~~~~~-~~~~~  255 (278)
                         ...+++++|+|++++.++.+....|. +.+.+
T Consensus       204 ---~~~~~~~~dva~~~~~l~~~~~~~G~~~~v~g  235 (242)
T 1uay_A          204 ---PPRLGRPEEYAALVLHILENPMLNGEVVRLDG  235 (242)
T ss_dssp             ---SCSCCCHHHHHHHHHHHHHCTTCCSCEEEEST
T ss_pred             ---cccCCCHHHHHHHHHHHhcCCCCCCcEEEEcC
Confidence               14578999999999999987545564 44443

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.96  E-value=4.5e-29  Score=204.02  Aligned_cols=223  Identities=14%  Similarity=0.085  Sum_probs=164.3

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc---
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE---   79 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---   79 (278)
                      |..+++|++|||||+|+||++++++|+++|+ .|++..|+.+..+... .+..... ++.++++|++|++++.++++   
T Consensus        21 ~~~l~gk~~lVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~   98 (271)
T 4ibo_A           21 IFDLGGRTALVTGSSRGLGRAMAEGLAVAGA-RILINGTDPSRVAQTVQEFRNVGH-DAEAVAFDVTSESEIIEAFARLD   98 (271)
T ss_dssp             GGCCTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTC-CEEECCCCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHHH
Confidence            4567889999999999999999999999999 8888888665433221 1111122 78999999999999988876   


Q ss_pred             ----CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHH----hcCCCEEEEecceeeeecCCCCCCcccc
Q 023689           80 ----GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFD  147 (278)
Q Consensus        80 ----~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~  147 (278)
                          ++|++||+||.....    ...++|+..+++|+.++.++++++.    +.+.++||++||..+..+.+..      
T Consensus        99 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~------  172 (271)
T 4ibo_A           99 EQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARATV------  172 (271)
T ss_dssp             HHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTC------
T ss_pred             HHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCCCc------
Confidence                689999999975432    2345678899999999999877663    3466799999998876554432      


Q ss_pred             CCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccc
Q 023689          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (278)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (278)
                                    ..|+.+|.+.+.+.+.++.+   +|+++++++||.|.++...... .............|      
T Consensus       173 --------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~p------  231 (271)
T 4ibo_A          173 --------------APYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALI-DNPEFDAWVKARTP------  231 (271)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHH-HCHHHHHHHHHHST------
T ss_pred             --------------hhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcc-cCHHHHHHHHhcCC------
Confidence                          57999999999999988876   5899999999999998643210 01122223333333      


Q ss_pred             ccCcccHHHHHHHHHhhhcCCC--CCce-EEecC
Q 023689          225 WLGAVPVKDVAKAQVLLFESPA--ASGR-YLCTN  255 (278)
Q Consensus       225 ~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~  255 (278)
                      ...+.+++|+|+++++++....  ..|. +.+.+
T Consensus       232 ~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdG  265 (271)
T 4ibo_A          232 AKRWGKPQELVGTAVFLSASASDYVNGQIIYVDG  265 (271)
T ss_dssp             TCSCBCGGGGHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCCcCHHHHHHHHHHHhCccccCCCCcEEEECC
Confidence            3567899999999999887543  3464 44443

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.96  E-value=3.7e-28  Score=199.01  Aligned_cols=221  Identities=15%  Similarity=0.133  Sum_probs=156.0

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHh-------
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAV-------   78 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~-------   78 (278)
                      +++|++|||||+|+||++++++|+++|+ .|++..|+.+..+... .+.... .++.++.+|++|++++.+++       
T Consensus        19 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   96 (273)
T 1ae1_A           19 LKGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKG-LNVEGSVCDLLSRTERDKLMQTVAHVF   96 (273)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            5678999999999999999999999999 8998888764332221 111111 27889999999999988877       


Q ss_pred             -cCccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccCC
Q 023689           79 -EGCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (278)
Q Consensus        79 -~~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~  149 (278)
                       .++|++||+||.....    ...++++..+++|+.++.++++++    ++++.++||++||..++.+.+..        
T Consensus        97 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~--------  168 (273)
T 1ae1_A           97 DGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSV--------  168 (273)
T ss_dssp             TSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTC--------
T ss_pred             CCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCCCc--------
Confidence             4689999999975432    223467888999999999998877    34566899999998776543321        


Q ss_pred             CCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCch---hHHHHHHHhhCCCCcccc
Q 023689          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNA---SCAVLQQLLQGSKDTQEY  223 (278)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~  223 (278)
                                  ..|+.+|.+.+.+.+.++.+.   |+++++++||.++++........   ............|     
T Consensus       169 ------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p-----  231 (273)
T 1ae1_A          169 ------------SLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTP-----  231 (273)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHST-----
T ss_pred             ------------chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCC-----
Confidence                        579999999999998888654   99999999999999864332110   1122222222222     


Q ss_pred             cccCcccHHHHHHHHHhhhcCCC--CCceE-EecC
Q 023689          224 HWLGAVPVKDVAKAQVLLFESPA--ASGRY-LCTN  255 (278)
Q Consensus       224 ~~~~~i~~~D~a~~~~~~~~~~~--~~~~~-~~~~  255 (278)
                       ...+.+++|+|+++++++....  ..|.. .+.+
T Consensus       232 -~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdG  265 (273)
T 1ae1_A          232 -MGRAGKPQEVSALIAFLCFPAASYITGQIIWADG  265 (273)
T ss_dssp             -TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             -CCCCcCHHHHHHHHHHHhCccccCcCCCEEEECC
Confidence             2457899999999999986532  24644 4443

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.96  E-value=2.8e-28  Score=197.88  Aligned_cols=219  Identities=15%  Similarity=0.101  Sum_probs=157.4

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc---
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE---   79 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---   79 (278)
                      |+.+++|++|||||+|+||++++++|+++|+ .|++..|+.+. +... .+.     . .++++|++|++++.++++   
T Consensus         1 M~~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~-~~~~~~~~-----~-~~~~~D~~~~~~~~~~~~~~~   72 (256)
T 2d1y_A            1 MGLFAGKGVLVTGGARGIGRAIAQAFAREGA-LVALCDLRPEG-KEVAEAIG-----G-AFFQVDLEDERERVRFVEEAA   72 (256)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTH-HHHHHHHT-----C-EEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChhH-HHHHHHhh-----C-CEEEeeCCCHHHHHHHHHHHH
Confidence            4456689999999999999999999999999 89999887755 3221 111     3 788999999998888775   


Q ss_pred             ----CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHH----hcCCCEEEEecceeeeecCCCCCCcccc
Q 023689           80 ----GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFD  147 (278)
Q Consensus        80 ----~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~  147 (278)
                          ++|+|||+||.....    ...++++..+++|+.++.++++++.    +++.++||++||..++.+.+..      
T Consensus        73 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~------  146 (256)
T 2d1y_A           73 YALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQEN------  146 (256)
T ss_dssp             HHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTB------
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCC------
Confidence                689999999975432    1234568899999999999988774    3567899999998776554321      


Q ss_pred             CCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCc--h-hHHHHHHHhhCCCCcc
Q 023689          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN--A-SCAVLQQLLQGSKDTQ  221 (278)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~--~-~~~~~~~~~~~~~~~~  221 (278)
                                    ..|+.+|...+.+.+.++.+   +|+++++++||.+.++.......  . ............    
T Consensus       147 --------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~----  208 (256)
T 2d1y_A          147 --------------AAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLH----  208 (256)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTS----
T ss_pred             --------------hhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHHhcC----
Confidence                          57999999999999888865   48999999999998864211000  0 000001111111    


Q ss_pred             cccccCcccHHHHHHHHHhhhcCCC--CCc-eEEecCc
Q 023689          222 EYHWLGAVPVKDVAKAQVLLFESPA--ASG-RYLCTNG  256 (278)
Q Consensus       222 ~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  256 (278)
                        ....+++++|+|+++++++....  ..| .+.+.++
T Consensus       209 --~~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~v~gG  244 (256)
T 2d1y_A          209 --ALRRLGKPEEVAEAVLFLASEKASFITGAILPVDGG  244 (256)
T ss_dssp             --TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             --CCCCCcCHHHHHHHHHHHhCchhcCCCCCEEEECCC
Confidence              24568999999999999987643  346 4555443

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.96  E-value=1.9e-28  Score=198.74  Aligned_cols=224  Identities=18%  Similarity=0.158  Sum_probs=160.5

Q ss_pred             cccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCce-EEEEccCCChhhHHHHh--
Q 023689            3 SEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANL-RVFEADVLDSGAVSRAV--   78 (278)
Q Consensus         3 ~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v-~~~~~Dl~d~~~~~~~~--   78 (278)
                      .|.++++|++|||||+|+||++++++|+++|+ +|+++.|+.+..+... .+   .. ++ .++.+|++|++++.+++  
T Consensus         5 ~~~~~~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~~D~~~~~~~~~~~~~   79 (254)
T 2wsb_A            5 TVFRLDGACAAVTGAGSGIGLEICRAFAASGA-RLILIDREAAALDRAAQEL---GA-AVAARIVADVTDAEAMTAAAAE   79 (254)
T ss_dssp             TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH---GG-GEEEEEECCTTCHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh---cc-cceeEEEEecCCHHHHHHHHHH
Confidence            34456789999999999999999999999999 8999998764432221 11   11 56 88999999999988877  


Q ss_pred             ----cCccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccc
Q 023689           79 ----EGCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVF  146 (278)
Q Consensus        79 ----~~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~  146 (278)
                          .++|+|||+||.....    ...+.++..+++|+.++.++++++    ++++.++||++||..++.+.+..     
T Consensus        80 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~-----  154 (254)
T 2wsb_A           80 AEAVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQ-----  154 (254)
T ss_dssp             HHHHSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSS-----
T ss_pred             HHhhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCCC-----
Confidence                3689999999975432    122356788999999977666655    45677899999997765443221     


Q ss_pred             cCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccc
Q 023689          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (278)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (278)
                             +      ...|+.+|.+.+.+.+.++.+.   |++++++|||.++|+...... .............+     
T Consensus       155 -------~------~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~-----  215 (254)
T 2wsb_A          155 -------F------ASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMR-ERPELFETWLDMTP-----  215 (254)
T ss_dssp             -------C------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHH-TCHHHHHHHHHTST-----
T ss_pred             -------c------chHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccc-cChHHHHHHHhcCC-----
Confidence                   1      1479999999999999888764   999999999999998532110 01122333333333     


Q ss_pred             cccCcccHHHHHHHHHhhhcCCC--CCce-EEecCc
Q 023689          224 HWLGAVPVKDVAKAQVLLFESPA--ASGR-YLCTNG  256 (278)
Q Consensus       224 ~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  256 (278)
                       ...+++++|+|++++.++....  ..|. +.+.++
T Consensus       216 -~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  250 (254)
T 2wsb_A          216 -MGRCGEPSEIAAAALFLASPAASYVTGAILAVDGG  250 (254)
T ss_dssp             -TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -CCCCCCHHHHHHHHHHHhCcccccccCCEEEECCC
Confidence             3568899999999999986532  3464 445444

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.96  E-value=1.8e-28  Score=200.43  Aligned_cols=212  Identities=17%  Similarity=0.124  Sum_probs=147.3

Q ss_pred             ccccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc-
Q 023689            2 ASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-   79 (278)
Q Consensus         2 ~~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-   79 (278)
                      ++|+.+++|++|||||+|+||++++++|.++|+ .|++..|+.+..+... .+.    .++.++++|++|+++++++++ 
T Consensus        21 ~~m~~~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~   95 (272)
T 4dyv_A           21 QSMSKTGKKIAIVTGAGSGVGRAVAVALAGAGY-GVALAGRRLDALQETAAEIG----DDALCVPTDVTDPDSVRALFTA   95 (272)
T ss_dssp             -------CCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHT----SCCEEEECCTTSHHHHHHHHHH
T ss_pred             hhhcCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhC----CCeEEEEecCCCHHHHHHHHHH
Confidence            577778889999999999999999999999999 8988888765433322 111    178899999999999988876 


Q ss_pred             ------CccEEEEecccCCC-----CCCCCchhhhhhhHHhHHHHHHHHHH----hcC--CCEEEEecceeeeecCCCCC
Q 023689           80 ------GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAK----RFG--VRRVVVTSSISAIVPNPGWK  142 (278)
Q Consensus        80 ------~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~--~~~~v~~Ss~~~~~~~~~~~  142 (278)
                            ++|++||+||....     +...++++..+++|+.++.++++++.    +++  .++||++||..++.+.+.. 
T Consensus        96 ~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~-  174 (272)
T 4dyv_A           96 TVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYS-  174 (272)
T ss_dssp             HHHHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTTC-
T ss_pred             HHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCCc-
Confidence                  78999999997543     22345678899999999888777663    333  4689999998876554432 


Q ss_pred             CccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCC
Q 023689          143 GKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKD  219 (278)
Q Consensus       143 ~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~  219 (278)
                                         ..|+.+|.+.+.+.+.++.+   +|+++++++||.|.++.........    .....    
T Consensus       175 -------------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~----~~~~~----  227 (272)
T 4dyv_A          175 -------------------APYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAGV----PQADL----  227 (272)
T ss_dssp             -------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC------------------------
T ss_pred             -------------------hHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhcccc----hhhhh----
Confidence                               57999999999999888865   5899999999999998643321100    00000    


Q ss_pred             cccccccCcccHHHHHHHHHhhhcCCCCC
Q 023689          220 TQEYHWLGAVPVKDVAKAQVLLFESPAAS  248 (278)
Q Consensus       220 ~~~~~~~~~i~~~D~a~~~~~~~~~~~~~  248 (278)
                        ......+++++|+|+++++++.++...
T Consensus       228 --~~~~~~~~~pedvA~~v~fL~s~~~~~  254 (272)
T 4dyv_A          228 --SIKVEPVMDVAHVASAVVYMASLPLDA  254 (272)
T ss_dssp             ----------CHHHHHHHHHHHHHSCTTS
T ss_pred             --cccccCCCCHHHHHHHHHHHhCCCCcC
Confidence              012345789999999999999987654

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.96  E-value=3.8e-29  Score=196.62  Aligned_cols=192  Identities=19%  Similarity=0.150  Sum_probs=149.9

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc---CccEEEE
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---GCKGVFH   86 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---~~d~vi~   86 (278)
                      |++|||||+|+||++++++|+++   +|+++.|+++..+.+....   . . +++.+|++|++++.++++   ++|+|||
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~---~V~~~~r~~~~~~~~~~~~---~-~-~~~~~D~~~~~~~~~~~~~~~~id~vi~   72 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH---DLLLSGRRAGALAELAREV---G-A-RALPADLADELEAKALLEEAGPLDLLVH   72 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS---EEEEECSCHHHHHHHHHHH---T-C-EECCCCTTSHHHHHHHHHHHCSEEEEEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC---CEEEEECCHHHHHHHHHhc---c-C-cEEEeeCCCHHHHHHHHHhcCCCCEEEE
Confidence            58999999999999999999987   6888888654433222100   0 2 788899999999999998   8999999


Q ss_pred             ecccCCC----CCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCc
Q 023689           87 VASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK  162 (278)
Q Consensus        87 ~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  162 (278)
                      +||....    +...++++..+++|+.++.++++++++.+.++||++||..++.+.+.                    ..
T Consensus        73 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~~~~~--------------------~~  132 (207)
T 2yut_A           73 AVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYVQVPG--------------------FA  132 (207)
T ss_dssp             CCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHSSTT--------------------BH
T ss_pred             CCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhccCCCC--------------------cc
Confidence            9997543    22456778899999999999999997777789999999777644322                    15


Q ss_pred             hhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHHHHHHHHH
Q 023689          163 WYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQV  239 (278)
Q Consensus       163 ~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  239 (278)
                      .|+.+|...+.+.+.++.+   +|++++++|||.++|+....             .+      ....++++++|+|++++
T Consensus       133 ~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~~-------------~~------~~~~~~~~~~dva~~~~  193 (207)
T 2yut_A          133 AYAAAKGALEAYLEAARKELLREGVHLVLVRLPAVATGLWAP-------------LG------GPPKGALSPEEAARKVL  193 (207)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGGGG-------------GT------SCCTTCBCHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhCCEEEEEecCcccCCCccc-------------cC------CCCCCCCCHHHHHHHHH
Confidence            7999999999999988876   59999999999999885211             11      12478999999999999


Q ss_pred             hhhcCCCCC
Q 023689          240 LLFESPAAS  248 (278)
Q Consensus       240 ~~~~~~~~~  248 (278)
                      .++.++...
T Consensus       194 ~~~~~~~~~  202 (207)
T 2yut_A          194 EGLFREPVP  202 (207)
T ss_dssp             HHHC--CCC
T ss_pred             HHHhCCCCc
Confidence            999876553

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.96  E-value=4e-28  Score=196.76  Aligned_cols=222  Identities=16%  Similarity=0.112  Sum_probs=164.2

Q ss_pred             cccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc---
Q 023689            3 SEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---   79 (278)
Q Consensus         3 ~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---   79 (278)
                      .|..+++|++|||||+|+||++++++|.++|+ .|++..|+.+..+.+....  . .++.++++|++|+++++++++   
T Consensus         2 ~m~~l~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~--~-~~~~~~~~Dv~~~~~v~~~~~~~~   77 (255)
T 4eso_A            2 VMGNYQGKKAIVIGGTHGMGLATVRRLVEGGA-EVLLTGRNESNIARIREEF--G-PRVHALRSDIADLNEIAVLGAAAG   77 (255)
T ss_dssp             --CTTTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH--G-GGEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh--C-CcceEEEccCCCHHHHHHHHHHHH
Confidence            36678899999999999999999999999999 8999988765433332111  1 178999999999998887765   


Q ss_pred             ----CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHhc--CCCEEEEecceeeeecCCCCCCccccCC
Q 023689           80 ----GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDET  149 (278)
Q Consensus        80 ----~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~E~  149 (278)
                          ++|++||+||.....    ...++++..+++|+.++.++++++...  ..+++|++||..++.+.+..        
T Consensus        78 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------  149 (255)
T 4eso_A           78 QTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHPGM--------  149 (255)
T ss_dssp             HHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBCTTB--------
T ss_pred             HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCCc--------
Confidence                689999999976542    234567889999999999999999764  23589999998876654432        


Q ss_pred             CCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCC-C-ch-hHHHHHHHhhCCCCcccc
Q 023689          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPY-L-NA-SCAVLQQLLQGSKDTQEY  223 (278)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~-~-~~-~~~~~~~~~~~~~~~~~~  223 (278)
                                  ..|+.+|.+.+.+.+.++.+.   |+++++++||.+.++..... . .. ...+........|     
T Consensus       150 ------------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p-----  212 (255)
T 4eso_A          150 ------------SVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITP-----  212 (255)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHST-----
T ss_pred             ------------hHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCC-----
Confidence                        579999999999999888764   89999999999999865432 1 11 1112222222222     


Q ss_pred             cccCcccHHHHHHHHHhhhcCC-CCCce-EEec
Q 023689          224 HWLGAVPVKDVAKAQVLLFESP-AASGR-YLCT  254 (278)
Q Consensus       224 ~~~~~i~~~D~a~~~~~~~~~~-~~~~~-~~~~  254 (278)
                       ...+.+++|+|+++++++... ...|. +.+.
T Consensus       213 -~~r~~~pedvA~~v~~L~s~~~~itG~~i~vd  244 (255)
T 4eso_A          213 -MKRNGTADEVARAVLFLAFEATFTTGAKLAVD  244 (255)
T ss_dssp             -TSSCBCHHHHHHHHHHHHHTCTTCCSCEEEES
T ss_pred             -CCCCcCHHHHHHHHHHHcCcCcCccCCEEEEC
Confidence             356789999999999998752 23464 4443

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.96  E-value=1.8e-28  Score=205.04  Aligned_cols=246  Identities=13%  Similarity=0.074  Sum_probs=162.6

Q ss_pred             cccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCCC-CCCceEEEEccCCChhhHHHHhc-
Q 023689            3 SEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGA-GDANLRVFEADVLDSGAVSRAVE-   79 (278)
Q Consensus         3 ~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~~-~~~~v~~~~~Dl~d~~~~~~~~~-   79 (278)
                      .|+++++|+||||||+|+||++++++|+++|+ .|++.+|+.+..+.... +... ...++.++.+|++|++++.++++ 
T Consensus         2 ~m~~l~~k~vlVTGas~gIG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~   80 (319)
T 3ioy_A            2 SLKDFAGRTAFVTGGANGVGIGLVRQLLNQGC-KVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADE   80 (319)
T ss_dssp             -CCCCTTCEEEEETTTSTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHH
T ss_pred             CccCCCCCEEEEcCCchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHH
Confidence            36677889999999999999999999999999 89999987654333221 1100 11168899999999999888876 


Q ss_pred             ------CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHhc----------CCCEEEEecceeeeecCC
Q 023689           80 ------GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF----------GVRRVVVTSSISAIVPNP  139 (278)
Q Consensus        80 ------~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~----------~~~~~v~~Ss~~~~~~~~  139 (278)
                            ++|+|||+||.....    ...++++..+++|+.|+.++++++...          +.++||++||.+++.+.+
T Consensus        81 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~  160 (319)
T 3ioy_A           81 VEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAG  160 (319)
T ss_dssp             HHHHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCS
T ss_pred             HHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCC
Confidence                  579999999975432    233567889999999999988877432          356899999988876544


Q ss_pred             CCCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHH---hcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhC
Q 023689          140 GWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQG  216 (278)
Q Consensus       140 ~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~  216 (278)
                      ..                    ..|+.||.+.+.+.+.++.   ..|+++++++||.|.++......... ..+......
T Consensus       161 ~~--------------------~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~-~~~~~~~~~  219 (319)
T 3ioy_A          161 SP--------------------GIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRP-DALKGEVKP  219 (319)
T ss_dssp             SS--------------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC---------------------
T ss_pred             CC--------------------HHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCc-hhhcccccc
Confidence            32                    5799999966666655554   35899999999999998654321110 110000000


Q ss_pred             C-C---CcccccccCcccHHHHHHHHHhhhcCCCCCceEEecCcc--ccHHHHHHHHHHhCCC
Q 023689          217 S-K---DTQEYHWLGAVPVKDVAKAQVLLFESPAASGRYLCTNGI--YQFGDFAERVSKLFPE  273 (278)
Q Consensus       217 ~-~---~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~~--~s~~e~~~~i~~~~~~  273 (278)
                      . .   ..........++++|+|++++.+++++.   .++..+..  -.+++.+..+.+.+|+
T Consensus       220 ~~~~~~~~~~~~~~~~~~pe~vA~~~~~al~~~~---~~i~~~~~~~~~~~~~~~~~~~~~~~  279 (319)
T 3ioy_A          220 VDKTAVERLAGVHEFGMEPDVIGARVIEAMKANR---LHIFSHPDHKEELREVFDEIIAEYQD  279 (319)
T ss_dssp             ---------CCGGGSSBCHHHHHHHHHHHHHTTC---SEECCCSTTHHHHHHHHHHHHHTCCC
T ss_pred             hhHHHHHHHHHhhhcCCCHHHHHHHHHHHHHcCC---CEEEcCHHHHHHHHHHHHHHHHhhhc
Confidence            0 0   0001112223899999999999998753   34444332  2466666677666663

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.96  E-value=1.3e-27  Score=195.14  Aligned_cols=214  Identities=17%  Similarity=0.158  Sum_probs=160.4

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc------
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~------   79 (278)
                      .+++|+||||||+|+||++++++|+++|+ .|++..|+.+....          .+.++++|++|++++.++++      
T Consensus        11 ~~~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~----------~~~~~~~Dv~~~~~v~~~~~~~~~~~   79 (269)
T 3vtz_A           11 EFTDKVAIVTGGSSGIGLAVVDALVRYGA-KVVSVSLDEKSDVN----------VSDHFKIDVTNEEEVKEAVEKTTKKY   79 (269)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCC--CTT----------SSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCchhccC----------ceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            56789999999999999999999999999 89888887654311          56788999999999888876      


Q ss_pred             -CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHH----hcCCCEEEEecceeeeecCCCCCCccccCCC
Q 023689           80 -GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (278)
Q Consensus        80 -~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~  150 (278)
                       ++|++||+||.....    ...+.++..+++|+.++.++++++.    +++.++||++||..++.+.+..         
T Consensus        80 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  150 (269)
T 3vtz_A           80 GRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNA---------  150 (269)
T ss_dssp             SCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTC---------
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCC---------
Confidence             689999999975542    2234567889999999998888764    3567899999998876654432         


Q ss_pred             CCchhhhhccCchhhhHHHHHHHHHHHHHHhc--CCceEEEecceeeCCCCCCC--------CchhHHHHHHHhhCCCCc
Q 023689          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQPY--------LNASCAVLQQLLQGSKDT  220 (278)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~~~~~~lrp~~i~g~~~~~~--------~~~~~~~~~~~~~~~~~~  220 (278)
                                 ..|+.||.+.+.+.+.++.+.  ++++++++||.|.++.....        ...............+  
T Consensus       151 -----------~~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--  217 (269)
T 3vtz_A          151 -----------AAYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHP--  217 (269)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHST--
T ss_pred             -----------hhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCC--
Confidence                       579999999999999998876  89999999999998753211        0011222233333332  


Q ss_pred             ccccccCcccHHHHHHHHHhhhcCCC--CCce-EEecCc
Q 023689          221 QEYHWLGAVPVKDVAKAQVLLFESPA--ASGR-YLCTNG  256 (278)
Q Consensus       221 ~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  256 (278)
                          ...+.+++|+|+++++++....  ..|. +.+.++
T Consensus       218 ----~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  252 (269)
T 3vtz_A          218 ----MGRIGRPEEVAEVVAFLASDRSSFITGACLTVDGG  252 (269)
T ss_dssp             ----TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ----CCCCcCHHHHHHHHHHHhCCccCCCcCcEEEECCC
Confidence                4567899999999999987543  3464 444443

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.96  E-value=1.4e-28  Score=202.08  Aligned_cols=232  Identities=19%  Similarity=0.130  Sum_probs=163.3

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCC---------cccc----cCCCCCCCceEEEEccCCC
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS---------SHLF----ALPGAGDANLRVFEADVLD   70 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~---------~~~~----~~~~~~~~~v~~~~~Dl~d   70 (278)
                      +..+++|++|||||+|+||++++++|+++|+ .|++..|+....         +.+.    .+.... .++.++++|++|
T Consensus         8 ~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~   85 (278)
T 3sx2_A            8 EGPLTGKVAFITGAARGQGRAHAVRLAADGA-DIIAVDLCDQIASVPYPLATPEELAATVKLVEDIG-SRIVARQADVRD   85 (278)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHT-CCEEEEECCTTC
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecccccccccccccchHHHHHHHHHHHhcC-CeEEEEeCCCCC
Confidence            4467789999999999999999999999999 888888763211         1110    000111 278999999999


Q ss_pred             hhhHHHHhc-------CccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHh----cC-CCEEEEecceeeeecC
Q 023689           71 SGAVSRAVE-------GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKR----FG-VRRVVVTSSISAIVPN  138 (278)
Q Consensus        71 ~~~~~~~~~-------~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~----~~-~~~~v~~Ss~~~~~~~  138 (278)
                      +++++++++       ++|++||+||........++++..+++|+.++.++++++..    ++ .++||++||..++.+.
T Consensus        86 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~  165 (278)
T 3sx2_A           86 RESLSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGV  165 (278)
T ss_dssp             HHHHHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCC
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCC
Confidence            999988876       68999999998665444567889999999999999998733    33 5789999998876543


Q ss_pred             CCCCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCchhHHHHHHH-h
Q 023689          139 PGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQL-L  214 (278)
Q Consensus       139 ~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~-~  214 (278)
                      ...           .+.     ...|+.+|.+.+.+.+.++.+.   |+++++++||.|.++.....  .....+... .
T Consensus       166 ~~~-----------~~~-----~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~  227 (278)
T 3sx2_A          166 GSA-----------DPG-----SVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNE--FTREWLAKMAA  227 (278)
T ss_dssp             CCS-----------SHH-----HHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSH--HHHHHHHHHHH
T ss_pred             ccC-----------CCC-----chHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhh--hHHHHHhhccc
Confidence            210           011     1579999999999998888654   79999999999999975432  111122111 1


Q ss_pred             hCCC-Ccccc-cccCcccHHHHHHHHHhhhcCCC--CCceE-EecC
Q 023689          215 QGSK-DTQEY-HWLGAVPVKDVAKAQVLLFESPA--ASGRY-LCTN  255 (278)
Q Consensus       215 ~~~~-~~~~~-~~~~~i~~~D~a~~~~~~~~~~~--~~~~~-~~~~  255 (278)
                      .... ..... ....+++++|+|+++++++....  ..|.. .+.+
T Consensus       228 ~~~~~~~~~~~~p~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdG  273 (278)
T 3sx2_A          228 ATDTPGAMGNAMPVEVLAPEDVANAVAWLVSDQARYITGVTLPVDA  273 (278)
T ss_dssp             HCC--CTTSCSSSCSSBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             hhhhhhhhhhhcCcCcCCHHHHHHHHHHHhCcccccccCCEEeECC
Confidence            1111 11111 12678999999999999986543  34654 4433

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.96  E-value=6.3e-28  Score=195.07  Aligned_cols=219  Identities=17%  Similarity=0.093  Sum_probs=156.6

Q ss_pred             cccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc---Cc
Q 023689            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---GC   81 (278)
Q Consensus         5 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---~~   81 (278)
                      ...++|+||||||+|+||++++++|+++|+ .|++..|+.+..+.+....  . .++.++.+|++|.+++.++++   ++
T Consensus        10 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~--~-~~~~~~~~D~~~~~~~~~~~~~~~~i   85 (249)
T 3f9i_A           10 IDLTGKTSLITGASSGIGSAIARLLHKLGS-KVIISGSNEEKLKSLGNAL--K-DNYTIEVCNLANKEECSNLISKTSNL   85 (249)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH--C-SSEEEEECCTTSHHHHHHHHHTCSCC
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHh--c-cCccEEEcCCCCHHHHHHHHHhcCCC
Confidence            356789999999999999999999999999 8999988765433332111  1 178899999999999999887   68


Q ss_pred             cEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccCCCCCc
Q 023689           82 KGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (278)
Q Consensus        82 d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~  153 (278)
                      |++||+||....    +...++++..+++|+.++.++++++    ++.+.++||++||..++.+.+..            
T Consensus        86 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~------------  153 (249)
T 3f9i_A           86 DILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQ------------  153 (249)
T ss_dssp             SEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCSCS------------
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCCCC------------
Confidence            999999997553    2344678999999999999988876    34456799999998877654432            


Q ss_pred             hhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCccc
Q 023689          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP  230 (278)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  230 (278)
                              ..|+.+|.+.+.+.+.++.+   +|+++++++||.+.++......   .........+.+      ...+.+
T Consensus       154 --------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~~------~~~~~~  216 (249)
T 3f9i_A          154 --------ANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLN---EKQREAIVQKIP------LGTYGI  216 (249)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CC---HHHHHHHHHHCT------TCSCBC
T ss_pred             --------chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccC---HHHHHHHHhcCC------CCCCcC
Confidence                    57999999999998888865   5899999999999998754432   222233333333      467889


Q ss_pred             HHHHHHHHHhhhcCCCC--Cce-EEecCc
Q 023689          231 VKDVAKAQVLLFESPAA--SGR-YLCTNG  256 (278)
Q Consensus       231 ~~D~a~~~~~~~~~~~~--~~~-~~~~~~  256 (278)
                      ++|+|+++++++.....  .|. +++.++
T Consensus       217 ~~dva~~~~~l~s~~~~~~tG~~~~vdgG  245 (249)
T 3f9i_A          217 PEDVAYAVAFLASNNASYITGQTLHVNGG  245 (249)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHHHcCCccCCccCcEEEECCC
Confidence            99999999999876433  464 455443

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.96  E-value=2.2e-28  Score=197.55  Aligned_cols=221  Identities=18%  Similarity=0.137  Sum_probs=160.5

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      ++++|++|||||+|+||++++++|+++|+ .|+++.|+.+..+.+.. +......++.++.+|++|++++.++++     
T Consensus         4 ~~~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (248)
T 2pnf_A            4 KLQGKVSLVTGSTRGIGRAIAEKLASAGS-TVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNL   82 (248)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            45678999999999999999999999999 89999887543322211 100001178899999999999988886     


Q ss_pred             --CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccCC
Q 023689           80 --GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (278)
Q Consensus        80 --~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~  149 (278)
                        ++|+|||+||.....    ...++++..+++|+.++.++++++    ++++.++||++||..++++.+..        
T Consensus        83 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~--------  154 (248)
T 2pnf_A           83 VDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQ--------  154 (248)
T ss_dssp             SSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCTTC--------
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCCCC--------
Confidence              789999999975431    223456789999999997666654    45677899999998776654332        


Q ss_pred             CCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccccc
Q 023689          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (278)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (278)
                                  ..|+.+|...+.+.+.++++   .+++++++|||.++++.....   ............+      ..
T Consensus       155 ------------~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~------~~  213 (248)
T 2pnf_A          155 ------------VNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVL---SEEIKQKYKEQIP------LG  213 (248)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS---CHHHHHHHHHTCT------TS
T ss_pred             ------------chHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhc---cHHHHHHHHhcCC------CC
Confidence                        57999999999998888765   489999999999999864432   1122222222222      34


Q ss_pred             CcccHHHHHHHHHhhhcCCC--CCc-eEEecCc
Q 023689          227 GAVPVKDVAKAQVLLFESPA--ASG-RYLCTNG  256 (278)
Q Consensus       227 ~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  256 (278)
                      .+++++|+|+++++++....  ..| .|++.++
T Consensus       214 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg  246 (248)
T 2pnf_A          214 RFGSPEEVANVVLFLCSELASYITGEVIHVNGG  246 (248)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CccCHHHHHHHHHHHhCchhhcCCCcEEEeCCC
Confidence            68899999999999987532  235 4555543

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.96  E-value=1.4e-28  Score=201.66  Aligned_cols=222  Identities=19%  Similarity=0.164  Sum_probs=160.5

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEec-CCCCCccc-ccCCCCCCCceEEEEccCCChhhHHHHhc----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVF-PGSDSSHL-FALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r-~~~~~~~~-~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~----   79 (278)
                      .+++|+||||||+|+||++++++|+++|+ .|+++.| +.+..+.+ ..+.... .++.++.+|++|++++.++++    
T Consensus        18 ~~~~k~vlItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~   95 (274)
T 1ja9_A           18 PLAGKVALTTGAGRGIGRGIAIELGRRGA-SVVVNYGSSSKAAEEVVAELKKLG-AQGVAIQADISKPSEVVALFDKAVS   95 (274)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTT-CCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCchHHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHHHHHH
Confidence            35678999999999999999999999999 8888888 43322211 1111111 278899999999999988886    


Q ss_pred             ---CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHhc---CCCEEEEecceeee-ecCCCCCCccccC
Q 023689           80 ---GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAI-VPNPGWKGKVFDE  148 (278)
Q Consensus        80 ---~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~v~~Ss~~~~-~~~~~~~~~~~~E  148 (278)
                         ++|+|||+||.....    ...+.++..+++|+.++.++++++.+.   + ++||++||..++ .+.+.        
T Consensus        96 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~~~~--------  166 (274)
T 1ja9_A           96 HFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTSSIAAVMTGIPN--------  166 (274)
T ss_dssp             HHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEECCGGGTCCSCCS--------
T ss_pred             HcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CEEEEEcChHhccCCCCC--------
Confidence               789999999975431    223456789999999999999988664   4 789999997775 33222        


Q ss_pred             CCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCC---------chh-HHHHHHHhh
Q 023689          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYL---------NAS-CAVLQQLLQ  215 (278)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~---------~~~-~~~~~~~~~  215 (278)
                                  ...|+.+|.+.|.+.+.++.+.   +++++++|||.++++......         ... .........
T Consensus       167 ------------~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (274)
T 1ja9_A          167 ------------HALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLAN  234 (274)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHH
T ss_pred             ------------CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHh
Confidence                        1579999999999999888764   999999999999987532100         011 222223333


Q ss_pred             CCCCcccccccCcccHHHHHHHHHhhhcCCCC--Cc-eEEecCc
Q 023689          216 GSKDTQEYHWLGAVPVKDVAKAQVLLFESPAA--SG-RYLCTNG  256 (278)
Q Consensus       216 ~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~-~~~~~~~  256 (278)
                      +.+      ..++++++|+|++++.++.++..  .| .|++.++
T Consensus       235 ~~~------~~~~~~~~dva~~i~~l~~~~~~~~~G~~~~v~gG  272 (274)
T 1ja9_A          235 MNP------LKRIGYPADIGRAVSALCQEESEWINGQVIKLTGG  272 (274)
T ss_dssp             TST------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCC------CCCccCHHHHHHHHHHHhCcccccccCcEEEecCC
Confidence            333      45789999999999999876432  45 4666544

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.96  E-value=5.8e-28  Score=196.43  Aligned_cols=212  Identities=16%  Similarity=0.173  Sum_probs=157.3

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      .+++|++|||||+|+||++++++|+++|+ .|++..|+.+..+... .+..    .+.++++|++|++++.++++     
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~----~~~~~~~D~~~~~~v~~~~~~~~~~   78 (260)
T 1nff_A            4 RLTGKVALVSGGARGMGASHVRAMVAEGA-KVVFGDILDEEGKAMAAELAD----AARYVHLDVTQPAQWKAAVDTAVTA   78 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTGG----GEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhc----CceEEEecCCCHHHHHHHHHHHHHH
Confidence            45678999999999999999999999999 8988888764433221 1211    58899999999999998887     


Q ss_pred             --CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHH----HHhcCCCEEEEecceeeeecCCCCCCccccCC
Q 023689           80 --GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEA----AKRFGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (278)
Q Consensus        80 --~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~----~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~  149 (278)
                        ++|+|||+||.....    ...++++..+++|+.++.+++++    +++++.++||++||..++.+.+..        
T Consensus        79 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------  150 (260)
T 1nff_A           79 FGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVAC--------  150 (260)
T ss_dssp             HSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTB--------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCCCc--------
Confidence              799999999975432    22346788999999999655554    455677899999998776543321        


Q ss_pred             CCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccccc
Q 023689          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (278)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (278)
                                  ..|+.+|...+.+.+.++.+   +|++++++|||.++|+..... .           .. .. .....
T Consensus       151 ------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~-----------~~-~~-~~~~~  204 (260)
T 1nff_A          151 ------------HGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWV-P-----------ED-IF-QTALG  204 (260)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTS-C-----------TT-CS-CCSSS
T ss_pred             ------------hhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccccc-h-----------hh-HH-hCccC
Confidence                        47999999999999888876   599999999999999864310 0           00 00 11234


Q ss_pred             CcccHHHHHHHHHhhhcCCC--CCc-eEEecCc
Q 023689          227 GAVPVKDVAKAQVLLFESPA--ASG-RYLCTNG  256 (278)
Q Consensus       227 ~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  256 (278)
                      .+++++|+|+++++++....  ..| .+.+.++
T Consensus       205 ~~~~~~dvA~~v~~l~s~~~~~~~G~~~~v~gG  237 (260)
T 1nff_A          205 RAAEPVEVSNLVVYLASDESSYSTGAEFVVDGG  237 (260)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCCHHHHHHHHHHHhCccccCCcCCEEEECCC
Confidence            67899999999999986543  235 4555443

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.96  E-value=5.7e-28  Score=199.11  Aligned_cols=222  Identities=14%  Similarity=0.078  Sum_probs=160.2

Q ss_pred             ccCCceEEEeCcc--hhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc----
Q 023689            6 EKEEETVCVTGAN--GFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (278)
Q Consensus         6 ~~~~~~vlItGat--G~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~----   79 (278)
                      .+++|++|||||+  |+||++++++|+++|+ .|++..|+.+..+.+..+..... ++.++.+|++|++++.++++    
T Consensus        18 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~   95 (285)
T 2p91_A           18 LLEGKRALITGVANERSIAYGIAKSFHREGA-QLAFTYATPKLEKRVREIAKGFG-SDLVVKCDVSLDEDIKNLKKFLEE   95 (285)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcC-CeEEEEcCCCCHHHHHHHHHHHHH
Confidence            3677899999999  9999999999999999 88888887632112222111011 46789999999999888876    


Q ss_pred             ---CccEEEEecccCCC--------CCCCCchhhhhhhHHhHHHHHHHHHHhcC---CCEEEEecceeeeecCCCCCCcc
Q 023689           80 ---GCKGVFHVASPCTL--------EDPVDPEKELILPAVQGTLNVLEAAKRFG---VRRVVVTSSISAIVPNPGWKGKV  145 (278)
Q Consensus        80 ---~~d~vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~ll~~~~~~~---~~~~v~~Ss~~~~~~~~~~~~~~  145 (278)
                         ++|+|||+||....        +...++++..+++|+.++.++++++.+.-   .++||++||..+..+.+..    
T Consensus        96 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----  171 (285)
T 2p91_A           96 NWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVVPHY----  171 (285)
T ss_dssp             HTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBCTTT----
T ss_pred             HcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCCCCc----
Confidence               68999999997542        22335678899999999999999996652   3799999997775543321    


Q ss_pred             ccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccc
Q 023689          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQE  222 (278)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (278)
                                      ..|+.+|.+.+.+.+.++.+   +|+++++++||.++++...... .............|    
T Consensus       172 ----------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~p----  230 (285)
T 2p91_A          172 ----------------NVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSIT-GFHLLMEHTTKVNP----  230 (285)
T ss_dssp             ----------------THHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CT-THHHHHHHHHHHST----
T ss_pred             ----------------cHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhccc-chHHHHHHHHhcCC----
Confidence                            57999999999999888865   4899999999999998754321 12222333333223    


Q ss_pred             ccccCcccHHHHHHHHHhhhcCCC--CCce-EEecCc
Q 023689          223 YHWLGAVPVKDVAKAQVLLFESPA--ASGR-YLCTNG  256 (278)
Q Consensus       223 ~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  256 (278)
                        ...+.+++|+|+++++++....  ..|. +.+.++
T Consensus       231 --~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgg  265 (285)
T 2p91_A          231 --FGKPITIEDVGDTAVFLCSDWARAITGEVVHVDNG  265 (285)
T ss_dssp             --TSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             --CCCCcCHHHHHHHHHHHcCCcccCCCCCEEEECCC
Confidence              2346799999999999986533  2464 444443

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.96  E-value=9.9e-29  Score=202.79  Aligned_cols=226  Identities=16%  Similarity=0.097  Sum_probs=162.5

Q ss_pred             cccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc--
Q 023689            3 SEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE--   79 (278)
Q Consensus         3 ~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--   79 (278)
                      .|+.+++|++|||||+|+||++++++|+++|+ .|+++.|+.+..+... .+...+ .++.++.+|++|++++.++++  
T Consensus        16 ~m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dv~~~~~v~~~~~~~   93 (277)
T 2rhc_B           16 HMATQDSEVALVTGATSGIGLEIARRLGKEGL-RVFVCARGEEGLRTTLKELREAG-VEADGRTCDVRSVPEIEALVAAV   93 (277)
T ss_dssp             TTCCTTSCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccccCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CceEEEECCCCCHHHHHHHHHHH
Confidence            46567789999999999999999999999999 8998888764432221 111111 178899999999999888876  


Q ss_pred             -----CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHhc------CCCEEEEecceeeeecCCCCCCc
Q 023689           80 -----GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF------GVRRVVVTSSISAIVPNPGWKGK  144 (278)
Q Consensus        80 -----~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~------~~~~~v~~Ss~~~~~~~~~~~~~  144 (278)
                           ++|+|||+||.....    ...++++..+++|+.++.++++++.+.      +.++||++||..++++.+..   
T Consensus        94 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~---  170 (277)
T 2rhc_B           94 VERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHA---  170 (277)
T ss_dssp             HHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCCTTC---
T ss_pred             HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCCCCC---
Confidence                 689999999975431    223456889999999999999987554      56799999998776543322   


Q ss_pred             cccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCch--h------HHHHHHH
Q 023689          145 VFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNA--S------CAVLQQL  213 (278)
Q Consensus       145 ~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~--~------~~~~~~~  213 (278)
                                       ..|+.+|...+.+.+.++.+   +|+++++++||.+.++........  .      .......
T Consensus       171 -----------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  233 (277)
T 2rhc_B          171 -----------------APYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRI  233 (277)
T ss_dssp             -----------------HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHH
T ss_pred             -----------------ccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHH
Confidence                             57999999999999888865   489999999999998753211000  0      1111112


Q ss_pred             hhCCCCcccccccCcccHHHHHHHHHhhhcCCC--CCce-EEecCc
Q 023689          214 LQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGR-YLCTNG  256 (278)
Q Consensus       214 ~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  256 (278)
                      ....|      ...+++++|+|+++++++..+.  ..|. +.+.++
T Consensus       234 ~~~~p------~~r~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdGG  273 (277)
T 2rhc_B          234 TARVP------IGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGG  273 (277)
T ss_dssp             HHHST------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HhcCC------CCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCC
Confidence            22222      3568999999999999987543  3454 455444

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.96  E-value=1.6e-28  Score=201.76  Aligned_cols=220  Identities=17%  Similarity=0.080  Sum_probs=160.8

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc-------
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------   79 (278)
                      ++|++|||||+|+||++++++|+++|+ .|++..|+.+..+... .+.... .++.++.+|++|++++.++++       
T Consensus        23 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  100 (279)
T 3sju_A           23 RPQTAFVTGVSSGIGLAVARTLAARGI-AVYGCARDAKNVSAAVDGLRAAG-HDVDGSSCDVTSTDEVHAAVAAAVERFG  100 (279)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTT-CCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            468999999999999999999999999 8988888765433221 121112 278999999999999888776       


Q ss_pred             CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHh------cCCCEEEEecceeeeecCCCCCCccccCC
Q 023689           80 GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR------FGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (278)
Q Consensus        80 ~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~------~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~  149 (278)
                      ++|+|||+||.....    ...+.++..+++|+.++.++++++.+      .+.++||++||..+..+.+..        
T Consensus       101 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~--------  172 (279)
T 3sju_A          101 PIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYA--------  172 (279)
T ss_dssp             SCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTTC--------
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCCC--------
Confidence            679999999975532    23345788899999999999998744      456799999998876554432        


Q ss_pred             CCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCC--------CchhHHHHHHHhhCCC
Q 023689          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPY--------LNASCAVLQQLLQGSK  218 (278)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~--------~~~~~~~~~~~~~~~~  218 (278)
                                  ..|+.+|.+.+.+.+.++.+   +|+++++++||.|.++.....        ...............|
T Consensus       173 ------------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  240 (279)
T 3sju_A          173 ------------APYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIP  240 (279)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCT
T ss_pred             ------------hhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCC
Confidence                        57999999999999888876   589999999999988742210        0011223333333333


Q ss_pred             CcccccccCcccHHHHHHHHHhhhcCCC--CCceE-EecC
Q 023689          219 DTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRY-LCTN  255 (278)
Q Consensus       219 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~-~~~~  255 (278)
                            ...+.+++|+|+++++++....  ..|.. .+.+
T Consensus       241 ------~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdG  274 (279)
T 3sju_A          241 ------LGRYSTPEEVAGLVGYLVTDAAASITAQALNVCG  274 (279)
T ss_dssp             ------TSSCBCHHHHHHHHHHHTSSGGGGCCSCEEEEST
T ss_pred             ------CCCCCCHHHHHHHHHHHhCccccCcCCcEEEECC
Confidence                  3567899999999999987643  34654 4443

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.96  E-value=2.3e-28  Score=200.77  Aligned_cols=226  Identities=17%  Similarity=0.175  Sum_probs=149.5

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCC-CCCccc-ccCCCCCCCceEEEEccCCChhhHHHHhc--
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG-SDSSHL-FALPGAGDANLRVFEADVLDSGAVSRAVE--   79 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~-~~~~~~-~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--   79 (278)
                      |..+++|++|||||+|+||++++++|+++|+ .|++..|+. +..+.. ..+...+ .++.++++|++|+++++++++  
T Consensus        24 m~~~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~  101 (280)
T 4da9_A           24 MTQKARPVAIVTGGRRGIGLGIARALAASGF-DIAITGIGDAEGVAPVIAELSGLG-ARVIFLRADLADLSSHQATVDAV  101 (280)
T ss_dssp             CSCCCCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCHHHHHHHHHHHHHTT-CCEEEEECCTTSGGGHHHHHHHH
T ss_pred             hhccCCCEEEEecCCCHHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHHHH
Confidence            3456789999999999999999999999999 888887533 222211 1111112 278999999999999888876  


Q ss_pred             -----CccEEEEecccCC--C----CCCCCchhhhhhhHHhHHHHHHHHHHhc----C---CCEEEEecceeeeecCCCC
Q 023689           80 -----GCKGVFHVASPCT--L----EDPVDPEKELILPAVQGTLNVLEAAKRF----G---VRRVVVTSSISAIVPNPGW  141 (278)
Q Consensus        80 -----~~d~vi~~a~~~~--~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~----~---~~~~v~~Ss~~~~~~~~~~  141 (278)
                           ++|++||+||...  .    +...++++..+++|+.++.++++++.+.    +   .++||++||..++.+.+..
T Consensus       102 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~  181 (280)
T 4da9_A          102 VAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPER  181 (280)
T ss_dssp             HHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------CC
T ss_pred             HHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCCc
Confidence                 7899999999732  1    2234567889999999999888877432    3   5689999998887654432


Q ss_pred             CCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCC
Q 023689          142 KGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSK  218 (278)
Q Consensus       142 ~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~  218 (278)
                                          ..|+.+|.+.+.+.+.++.+   +|+++++++||.|.++.......   ........+. 
T Consensus       182 --------------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~---~~~~~~~~~~-  237 (280)
T 4da9_A          182 --------------------LDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSG---KYDGLIESGL-  237 (280)
T ss_dssp             --------------------HHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC----------------------
T ss_pred             --------------------cHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcch---hHHHHHhhcC-
Confidence                                57999999999999988876   58999999999999986543211   1111111101 


Q ss_pred             CcccccccCcccHHHHHHHHHhhhcCCC--CCceEEecCcccc
Q 023689          219 DTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLCTNGIYQ  259 (278)
Q Consensus       219 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~~~~s  259 (278)
                          .....+.+++|+|+++++++....  ..|..+..++.++
T Consensus       238 ----~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~  276 (280)
T 4da9_A          238 ----VPMRRWGEPEDIGNIVAGLAGGQFGFATGSVIQADGGLS  276 (280)
T ss_dssp             --------CCBCHHHHHHHHHHHHTSTTGGGTTCEEEESTTCC
T ss_pred             ----CCcCCcCCHHHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence                124567899999999999987654  3465443333333

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.96  E-value=2e-28  Score=199.25  Aligned_cols=222  Identities=18%  Similarity=0.147  Sum_probs=159.1

Q ss_pred             cccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc----
Q 023689            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (278)
Q Consensus         5 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~----   79 (278)
                      ..+++|++|||||+|+||++++++|+++|+ .|++..|+.+..+... .+.... .++.++.+|++|+++++++++    
T Consensus        10 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~   87 (260)
T 2zat_A           10 KPLENKVALVTASTDGIGLAIARRLAQDGA-HVVVSSRKQENVDRTVATLQGEG-LSVTGTVCHVGKAEDRERLVAMAVN   87 (260)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CceEEEEccCCCHHHHHHHHHHHHH
Confidence            345678999999999999999999999999 8999988764332221 111111 168899999999998888776    


Q ss_pred             ---CccEEEEecccCCC-----CCCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCcccc
Q 023689           80 ---GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFD  147 (278)
Q Consensus        80 ---~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~  147 (278)
                         ++|+|||+||....     +...++++..+++|+.++.++++++    ++++.++||++||..++.+.+..      
T Consensus        88 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~------  161 (260)
T 2zat_A           88 LHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNL------  161 (260)
T ss_dssp             HHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTB------
T ss_pred             HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCCCc------
Confidence               78999999996431     2233457889999999998888876    35567899999997776543321      


Q ss_pred             CCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccc
Q 023689          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (278)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (278)
                                    ..|+.+|...+.+.+.++.+.   |+++++++||.+.++....... ............      .
T Consensus       162 --------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~~~~~~~~~~------~  220 (260)
T 2zat_A          162 --------------GPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWM-DKARKEYMKESL------R  220 (260)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHS-SHHHHHHHHHHH------T
T ss_pred             --------------hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhccc-ChHHHHHHHhcC------C
Confidence                          579999999999998888654   8999999999999886321100 001111111111      1


Q ss_pred             ccCcccHHHHHHHHHhhhcCCCC--Cc-eEEecC
Q 023689          225 WLGAVPVKDVAKAQVLLFESPAA--SG-RYLCTN  255 (278)
Q Consensus       225 ~~~~i~~~D~a~~~~~~~~~~~~--~~-~~~~~~  255 (278)
                      ...+++++|+|+++++++.....  .| .+++.+
T Consensus       221 ~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdg  254 (260)
T 2zat_A          221 IRRLGNPEDCAGIVSFLCSEDASYITGETVVVGG  254 (260)
T ss_dssp             CSSCBCGGGGHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             CCCCCCHHHHHHHHHHHcCcccCCccCCEEEECC
Confidence            35688999999999999875432  45 455543

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.96  E-value=2.4e-28  Score=198.85  Aligned_cols=222  Identities=14%  Similarity=0.108  Sum_probs=161.4

Q ss_pred             ccCCceEEEeCcc--hhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc----
Q 023689            6 EKEEETVCVTGAN--GFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (278)
Q Consensus         6 ~~~~~~vlItGat--G~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~----   79 (278)
                      .+++|++|||||+  |+||++++++|+++|+ +|++..|+.+..+.+..+..... .+.++++|++|+++++++++    
T Consensus         5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~   82 (261)
T 2wyu_A            5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGA-EVALSYQAERLRPEAEKLAEALG-GALLFRADVTQDEELDALFAGVKE   82 (261)
T ss_dssp             CCTTCEEEEESCCSSSSHHHHHHHHHHHHTC-EEEEEESCGGGHHHHHHHHHHTT-CCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcC-CcEEEECCCCCHHHHHHHHHHHHH
Confidence            3567899999999  9999999999999999 88888887631112222111111 47889999999999888876    


Q ss_pred             ---CccEEEEecccCCC--------CCCCCchhhhhhhHHhHHHHHHHHHHhc--CCCEEEEecceeeeecCCCCCCccc
Q 023689           80 ---GCKGVFHVASPCTL--------EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVF  146 (278)
Q Consensus        80 ---~~d~vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~  146 (278)
                         ++|+|||+||....        +...++++..+++|+.++.++++++.+.  ..++||++||..+..+.+..     
T Consensus        83 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----  157 (261)
T 2wyu_A           83 AFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKY-----  157 (261)
T ss_dssp             HHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTTC-----
T ss_pred             HcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCCCCc-----
Confidence               68999999997542        2234567889999999999999999765  12589999997765543321     


Q ss_pred             cCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccc
Q 023689          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (278)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (278)
                                     ..|+.+|...+.+.+.++.+.   |+++++++||.++++...... .............|     
T Consensus       158 ---------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~p-----  216 (261)
T 2wyu_A          158 ---------------NVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIP-GFTKMYDRVAQTAP-----  216 (261)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCT-THHHHHHHHHHHST-----
T ss_pred             ---------------hHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhcc-ccHHHHHHHHhcCC-----
Confidence                           579999999999999888764   999999999999998643321 12223333333333     


Q ss_pred             cccCcccHHHHHHHHHhhhcCCC--CCce-EEecCc
Q 023689          224 HWLGAVPVKDVAKAQVLLFESPA--ASGR-YLCTNG  256 (278)
Q Consensus       224 ~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  256 (278)
                       ...+.+++|+|+++++++....  ..|. +++.++
T Consensus       217 -~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG  251 (261)
T 2wyu_A          217 -LRRNITQEEVGNLGLFLLSPLASGITGEVVYVDAG  251 (261)
T ss_dssp             -TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -CCCCCCHHHHHHHHHHHcChhhcCCCCCEEEECCC
Confidence             2457799999999999986533  2454 445443

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.96  E-value=1.5e-28  Score=200.48  Aligned_cols=222  Identities=16%  Similarity=0.118  Sum_probs=162.6

Q ss_pred             cccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc--
Q 023689            3 SEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE--   79 (278)
Q Consensus         3 ~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--   79 (278)
                      .|..+++|++|||||+|+||++++++|.++|+ .|++..|+.+..+... .+......++.++++|++|+++++++++  
T Consensus        14 ~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   92 (266)
T 4egf_A           14 GVLRLDGKRALITGATKGIGADIARAFAAAGA-RLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRA   92 (266)
T ss_dssp             GGGCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH
Confidence            45667889999999999999999999999999 8988888765433221 1111011278999999999999888876  


Q ss_pred             -----CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHh----cC-CCEEEEecceeeeecCCCCCCcc
Q 023689           80 -----GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FG-VRRVVVTSSISAIVPNPGWKGKV  145 (278)
Q Consensus        80 -----~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~----~~-~~~~v~~Ss~~~~~~~~~~~~~~  145 (278)
                           ++|++||+||.....    ...+.++..+++|+.++.++++++.+    ++ .++||++||..++.+.+..    
T Consensus        93 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----  168 (266)
T 4egf_A           93 AEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDH----  168 (266)
T ss_dssp             HHHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTC----
T ss_pred             HHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCCC----
Confidence                 689999999976542    23346788999999999998887743    23 4689999998876554432    


Q ss_pred             ccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccc
Q 023689          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQE  222 (278)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (278)
                                      ..|+.+|.+.+.+.+.++.+   +|+++++++||.|.++....... ............|    
T Consensus       169 ----------------~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~p----  227 (266)
T 4egf_A          169 ----------------YAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWG-DEAKSAPMIARIP----  227 (266)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTC-SHHHHHHHHTTCT----
T ss_pred             ----------------hHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhcc-ChHHHHHHHhcCC----
Confidence                            57999999999998888876   48999999999999875322110 1122233333333    


Q ss_pred             ccccCcccHHHHHHHHHhhhcCCC--CCceEE
Q 023689          223 YHWLGAVPVKDVAKAQVLLFESPA--ASGRYL  252 (278)
Q Consensus       223 ~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~  252 (278)
                        ...+.+++|+|+++++++....  ..|..+
T Consensus       228 --~~r~~~p~dva~~v~~L~s~~~~~itG~~i  257 (266)
T 4egf_A          228 --LGRFAVPHEVSDAVVWLASDAASMINGVDI  257 (266)
T ss_dssp             --TSSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             --CCCCcCHHHHHHHHHHHhCchhcCccCcEE
Confidence              3567899999999999987543  346543

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.96  E-value=7.6e-29  Score=199.97  Aligned_cols=217  Identities=18%  Similarity=0.182  Sum_probs=155.6

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEE-ecCCCCCcccc-cCCCCCCCceEE-EEccCCChhhHHHHhc------
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINAT-VFPGSDSSHLF-ALPGAGDANLRV-FEADVLDSGAVSRAVE------   79 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~-~r~~~~~~~~~-~~~~~~~~~v~~-~~~Dl~d~~~~~~~~~------   79 (278)
                      ||++|||||+|+||++++++|+++|+ .|+++ .|+.+..+.+. .+..... ++.+ +.+|++|+++++++++      
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~-~v~~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGF-ALAIHYGQNREKAEEVAEEARRRGS-PLVAVLGANLLEAEAATALVHQAAEVL   78 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESSCHHHHHHHHHHHHHTTC-SCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCC-ceEEEEeccCCCHHHHHHHHHHHHHhc
Confidence            57999999999999999999999999 78777 66654332221 1111111 5666 8999999999888765      


Q ss_pred             -CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHH----HHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCC
Q 023689           80 -GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLN----VLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (278)
Q Consensus        80 -~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~----ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~  150 (278)
                       ++|+|||+||....    +...++++..+++|+.++.+    +++.+++.+.++||++||..++++.+..         
T Consensus        79 ~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~---------  149 (245)
T 2ph3_A           79 GGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPGQ---------  149 (245)
T ss_dssp             TCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCSSB---------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCCCC---------
Confidence             78999999997543    12334668889999999554    4555566677899999998776654321         


Q ss_pred             CCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccC
Q 023689          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (278)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (278)
                                 ..|+.+|.+.+.+.+.++++.   |++++++|||.++|+.....   ............+      ...
T Consensus       150 -----------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~------~~~  209 (245)
T 2ph3_A          150 -----------ANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERL---PQEVKEAYLKQIP------AGR  209 (245)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS---CHHHHHHHHHTCT------TCS
T ss_pred             -----------cchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhc---CHHHHHHHHhcCC------CCC
Confidence                       579999999999988888664   89999999999998854322   1222233333322      356


Q ss_pred             cccHHHHHHHHHhhhcCCC--CCc-eEEecCc
Q 023689          228 AVPVKDVAKAQVLLFESPA--ASG-RYLCTNG  256 (278)
Q Consensus       228 ~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  256 (278)
                      +++++|+|++++.++..+.  ..| .+++.++
T Consensus       210 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg  241 (245)
T 2ph3_A          210 FGRPEEVAEAVAFLVSEKAGYITGQTLCVDGG  241 (245)
T ss_dssp             CBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             CcCHHHHHHHHHHHhCcccccccCCEEEECCC
Confidence            7899999999999987643  235 4555554

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.96  E-value=4.8e-28  Score=197.52  Aligned_cols=222  Identities=14%  Similarity=0.075  Sum_probs=161.9

Q ss_pred             ccCCceEEEeCcc--hhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc----
Q 023689            6 EKEEETVCVTGAN--GFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (278)
Q Consensus         6 ~~~~~~vlItGat--G~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~----   79 (278)
                      .+++|++|||||+  |+||++++++|.++|+ .|++..|+....+.+..+..... ...++++|++|+++++++++    
T Consensus         6 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~   83 (265)
T 1qsg_A            6 FLSGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLG-SDIVLQCDVAEDASIDTMFAELGK   83 (265)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSTTTHHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHHHT
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHHhcC-CcEEEEccCCCHHHHHHHHHHHHH
Confidence            4678999999999  9999999999999999 89888887622222222111111 34788999999999988876    


Q ss_pred             ---CccEEEEecccCCC--------C-CCCCchhhhhhhHHhHHHHHHHHHHhc--CCCEEEEecceeeeecCCCCCCcc
Q 023689           80 ---GCKGVFHVASPCTL--------E-DPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKV  145 (278)
Q Consensus        80 ---~~d~vi~~a~~~~~--------~-~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~  145 (278)
                         ++|+|||+||....        + ...++++..+++|+.++.++++++.+.  ..++||++||..++.+.+..    
T Consensus        84 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~----  159 (265)
T 1qsg_A           84 VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNY----  159 (265)
T ss_dssp             TCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTT----
T ss_pred             HcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCCCCc----
Confidence               67999999997542        1 334567889999999999999999765  22589999997776543321    


Q ss_pred             ccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccc
Q 023689          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQE  222 (278)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (278)
                                      ..|+.+|...+.+.+.++.+.   |+++++++||.++++...... ...........+.|    
T Consensus       160 ----------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~p----  218 (265)
T 1qsg_A          160 ----------------NVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIK-DFRKMLAHCEAVTP----  218 (265)
T ss_dssp             ----------------THHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGST-THHHHHHHHHHHST----
T ss_pred             ----------------hHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhccc-ccHHHHHHHHhcCC----
Confidence                            579999999999999888764   899999999999998754321 12233333333333    


Q ss_pred             ccccCcccHHHHHHHHHhhhcCCCC--Cce-EEecCc
Q 023689          223 YHWLGAVPVKDVAKAQVLLFESPAA--SGR-YLCTNG  256 (278)
Q Consensus       223 ~~~~~~i~~~D~a~~~~~~~~~~~~--~~~-~~~~~~  256 (278)
                        ...+.+++|+|+++++++.....  .|. +.+.++
T Consensus       219 --~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG  253 (265)
T 1qsg_A          219 --IRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGG  253 (265)
T ss_dssp             --TSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             --CCCCCCHHHHHHHHHHHhCchhcCccCCEEEECCC
Confidence              24578999999999999865332  454 444443

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.96  E-value=3.2e-29  Score=209.31  Aligned_cols=227  Identities=15%  Similarity=0.148  Sum_probs=160.7

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCC--cc---cccCCCCCCCceEEEEccCCChhhHHHHhcCccE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS--SH---LFALPGAGDANLRVFEADVLDSGAVSRAVEGCKG   83 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~--~~---~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~   83 (278)
                      ||+||||||||+||++++++|++.|+ .|++++|+....  +.   +..+.   ..+++++++|++|++++.++++++|+
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~d~~~l~~~~~~~d~   79 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGH-PTYVLFRPEVVSNIDKVQMLLYFK---QLGAKLIEASLDDHQRLVDALKQVDV   79 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCSCCSSCHHHHHHHHHHH---TTTCEEECCCSSCHHHHHHHHTTCSE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCC-cEEEEECCCcccchhHHHHHHHHH---hCCeEEEeCCCCCHHHHHHHHhCCCE
Confidence            57899999999999999999999998 899999976431  11   11110   11789999999999999999999999


Q ss_pred             EEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcC-CCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCc
Q 023689           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK  162 (278)
Q Consensus        84 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  162 (278)
                      |||+++....           ..|+.++.+++++|++.+ +++||+ |+ .+.  ...   ..   +.+..+     ...
T Consensus        80 vi~~a~~~~~-----------~~~~~~~~~l~~aa~~~g~v~~~v~-S~-~g~--~~~---~~---~~~~~p-----~~~  133 (313)
T 1qyd_A           80 VISALAGGVL-----------SHHILEQLKLVEAIKEAGNIKRFLP-SE-FGM--DPD---IM---EHALQP-----GSI  133 (313)
T ss_dssp             EEECCCCSSS-----------STTTTTHHHHHHHHHHSCCCSEEEC-SC-CSS--CTT---SC---CCCCSS-----TTH
T ss_pred             EEECCccccc-----------hhhHHHHHHHHHHHHhcCCCceEEe-cC-CcC--Ccc---cc---ccCCCC-----Ccc
Confidence            9999986432           136788999999999998 999985 43 211  111   10   111111     124


Q ss_pred             hhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCC-cc--cccccCcccHHHHHHHHH
Q 023689          163 WYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKD-TQ--EYHWLGAVPVKDVAKAQV  239 (278)
Q Consensus       163 ~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~i~~~D~a~~~~  239 (278)
                      .| .+|..+|++++    +.+++++++||+.++|+..........   .....+... ..  ++..+++++++|+|++++
T Consensus       134 ~y-~sK~~~e~~~~----~~g~~~~ilrp~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~  205 (313)
T 1qyd_A          134 TF-IDKRKVRRAIE----AASIPYTYVSSNMFAGYFAGSLAQLDG---HMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTI  205 (313)
T ss_dssp             HH-HHHHHHHHHHH----HTTCCBCEEECCEEHHHHTTTSSCTTC---CSSCCSSEECCBTTSCSEEEEECHHHHHHHHH
T ss_pred             hH-HHHHHHHHHHH----hcCCCeEEEEeceeccccccccccccc---cccCCCCeEEEeCCCCceEEEEEHHHHHHHHH
Confidence            68 99999998885    579999999999998854322110000   000111111 11  346789999999999999


Q ss_pred             hhhcCCCCCc-eE-EecC-ccccHHHHHHHHHHhCCC
Q 023689          240 LLFESPAASG-RY-LCTN-GIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       240 ~~~~~~~~~~-~~-~~~~-~~~s~~e~~~~i~~~~~~  273 (278)
                      .++.++...+ .| +.++ +.+|+.|+++.+.+.+++
T Consensus       206 ~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~  242 (313)
T 1qyd_A          206 KSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQ  242 (313)
T ss_dssp             HHTTCGGGSSSEEECCCGGGEEEHHHHHHHHHHHHTC
T ss_pred             HHHhCcccCCceEEEeCCCCccCHHHHHHHHHHhcCC
Confidence            9998765434 44 4544 689999999999998853

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.96  E-value=6.9e-28  Score=198.88  Aligned_cols=234  Identities=18%  Similarity=0.173  Sum_probs=164.3

Q ss_pred             cccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcc---------cc----cCCCCCCCceEEEEccCC
Q 023689            3 SEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSH---------LF----ALPGAGDANLRVFEADVL   69 (278)
Q Consensus         3 ~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~---------~~----~~~~~~~~~v~~~~~Dl~   69 (278)
                      +|..+++|++|||||+|+||++++++|+++|+ .|++++|+......         +.    .+... ..++.++++|++
T Consensus         4 ~m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~   81 (287)
T 3pxx_A            4 SMGRVQDKVVLVTGGARGQGRSHAVKLAEEGA-DIILFDICHDIETNEYPLATSRDLEEAGLEVEKT-GRKAYTAEVDVR   81 (287)
T ss_dssp             SCCTTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHT-TSCEEEEECCTT
T ss_pred             cccccCCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcccccccccccchhhhHHHHHHHHHHHhc-CCceEEEEccCC
Confidence            57788899999999999999999999999999 88888876322110         00    01111 127899999999


Q ss_pred             ChhhHHHHhc-------CccEEEEecccCCCC--CCCCchhhhhhhHHhHHHHHHHHHHhc--CCCEEEEecceeeeecC
Q 023689           70 DSGAVSRAVE-------GCKGVFHVASPCTLE--DPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPN  138 (278)
Q Consensus        70 d~~~~~~~~~-------~~d~vi~~a~~~~~~--~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~Ss~~~~~~~  138 (278)
                      |++++.++++       ++|++|||||.....  ...+.++..+++|+.++.++++++...  +.+++|++||..++.+.
T Consensus        82 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~  161 (287)
T 3pxx_A           82 DRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAA  161 (287)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhcccc
Confidence            9999888876       689999999976543  334678899999999999999999775  34689999998876653


Q ss_pred             CCCCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCchhHHHHHHHhh
Q 023689          139 PGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQ  215 (278)
Q Consensus       139 ~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~  215 (278)
                      ..   .+..|..+. +.     ...|+.+|.+.+.+.+.++.+.   |+++++++||.|.++.....     ........
T Consensus       162 ~~---~~~~~~~~~-~~-----~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~-----~~~~~~~~  227 (287)
T 3pxx_A          162 AQ---PPGAGGPQG-PG-----GAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSA-----PMYRQFRP  227 (287)
T ss_dssp             HC---CC-----CH-HH-----HHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSH-----HHHHHHCT
T ss_pred             cc---cccccccCC-Cc-----cchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccc-----chhhhhcc
Confidence            22   112222211 11     2579999999999999888765   99999999999999875431     00001100


Q ss_pred             C--CCC---------cccccccCcccHHHHHHHHHhhhcCCC--CCceEE
Q 023689          216 G--SKD---------TQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYL  252 (278)
Q Consensus       216 ~--~~~---------~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~  252 (278)
                      .  .+.         ........+.+++|+|+++++++....  ..|..+
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~v~fL~s~~a~~itG~~i  277 (287)
T 3pxx_A          228 DLEAPSRADALLAFPAMQAMPTPYVEASDISNAVCFLASDESRYVTGLQF  277 (287)
T ss_dssp             TSSSCCHHHHHHHGGGGCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             ccccchhHHHHhhhhhhcccCCCCCCHHHHHhhHheecchhhcCCCCceE
Confidence            0  000         000112678999999999999986543  346543

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.96  E-value=3.7e-27  Score=189.02  Aligned_cols=200  Identities=18%  Similarity=0.138  Sum_probs=138.4

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCC-CCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNN-YTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g-~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      .||+||||||||+||++++++|+++| + .|+++.|+++....+..      .+++++++|++|++++.++++++|+|||
T Consensus        22 ~mk~vlVtGatG~iG~~l~~~L~~~G~~-~V~~~~R~~~~~~~~~~------~~~~~~~~Dl~d~~~~~~~~~~~D~vv~   94 (236)
T 3qvo_A           22 HMKNVLILGAGGQIARHVINQLADKQTI-KQTLFARQPAKIHKPYP------TNSQIIMGDVLNHAALKQAMQGQDIVYA   94 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTE-EEEEEESSGGGSCSSCC------TTEEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred             cccEEEEEeCCcHHHHHHHHHHHhCCCc-eEEEEEcChhhhccccc------CCcEEEEecCCCHHHHHHHhcCCCEEEE
Confidence            46899999999999999999999999 7 99999998765443322      2899999999999999999999999999


Q ss_pred             ecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhh
Q 023689           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPV  166 (278)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~  166 (278)
                      +|+...       .       ...+.++++++++.++++||++||..++...+.. .....|..+          ..+..
T Consensus        95 ~a~~~~-------~-------~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~-~~~~~~~~~----------~~~~~  149 (236)
T 3qvo_A           95 NLTGED-------L-------DIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGK-FVEWNNAVI----------GEPLK  149 (236)
T ss_dssp             ECCSTT-------H-------HHHHHHHHHHHHHTTCCEEEEECCCCC---------------------------CGGGH
T ss_pred             cCCCCc-------h-------hHHHHHHHHHHHHcCCCEEEEEecceecCCCCcc-cccchhhcc----------cchHH
Confidence            997521       1       1347789999999999999999997775543321 111222211          12233


Q ss_pred             HHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHHHHHHHHHhhhcCCC
Q 023689          167 SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA  246 (278)
Q Consensus       167 sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~  246 (278)
                      .+..+|+.+.    ++|++++++|||.++++...... .       ...+.+     ....+++++|+|++++.++.++.
T Consensus       150 ~~~~~~~~l~----~~gi~~~~vrPg~i~~~~~~~~~-~-------~~~~~~-----~~~~~i~~~DvA~~i~~ll~~~~  212 (236)
T 3qvo_A          150 PFRRAADAIE----ASGLEYTILRPAWLTDEDIIDYE-L-------TSRNEP-----FKGTIVSRKSVAALITDIIDKPE  212 (236)
T ss_dssp             HHHHHHHHHH----TSCSEEEEEEECEEECCSCCCCE-E-------ECTTSC-----CSCSEEEHHHHHHHHHHHHHSTT
T ss_pred             HHHHHHHHHH----HCCCCEEEEeCCcccCCCCcceE-E-------eccCCC-----CCCcEECHHHHHHHHHHHHcCcc
Confidence            3444455443    77999999999999998643320 0       001111     12468999999999999999876


Q ss_pred             -CCc-eEEecCc
Q 023689          247 -ASG-RYLCTNG  256 (278)
Q Consensus       247 -~~~-~~~~~~~  256 (278)
                       ..+ .|.+++.
T Consensus       213 ~~~g~~~~i~~~  224 (236)
T 3qvo_A          213 KHIGENIGINQP  224 (236)
T ss_dssp             TTTTEEEEEECS
T ss_pred             cccCeeEEecCC
Confidence             334 5655443

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.96  E-value=2.6e-28  Score=201.57  Aligned_cols=221  Identities=14%  Similarity=0.111  Sum_probs=162.6

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCC-CcccccCCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~-~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      .+++|++|||||+|+||++++++|+++|+ .|++..|+.+. .+...........++.++++|++|+++++++++     
T Consensus        44 ~l~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  122 (291)
T 3ijr_A           44 KLKGKNVLITGGDSGIGRAVSIAFAKEGA-NIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQ  122 (291)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            45689999999999999999999999999 88888887642 111111111111278999999999999888876     


Q ss_pred             --CccEEEEecccCCCC-----CCCCchhhhhhhHHhHHHHHHHHHHhc--CCCEEEEecceeeeecCCCCCCccccCCC
Q 023689           80 --GCKGVFHVASPCTLE-----DPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (278)
Q Consensus        80 --~~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~  150 (278)
                        ++|++||+||.....     ...++++..+++|+.++.++++++...  ..++||++||..++.+.+..         
T Consensus       123 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  193 (291)
T 3ijr_A          123 LGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNETL---------  193 (291)
T ss_dssp             HSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCTTC---------
T ss_pred             cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCCCC---------
Confidence              689999999875431     234567899999999999999999765  34689999998887654432         


Q ss_pred             CCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccC
Q 023689          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (278)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (278)
                                 ..|+.+|.+.+.+.+.++.+.   |+++++++||.|+++......  .......+....      ....
T Consensus       194 -----------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~------p~~r  254 (291)
T 3ijr_A          194 -----------IDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSF--DEKKVSQFGSNV------PMQR  254 (291)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHS--CHHHHHHTTTTS------TTSS
T ss_pred             -----------hhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccC--CHHHHHHHHccC------CCCC
Confidence                       579999999999999888764   899999999999998532111  112222222222      2456


Q ss_pred             cccHHHHHHHHHhhhcCCC--CCceE-EecC
Q 023689          228 AVPVKDVAKAQVLLFESPA--ASGRY-LCTN  255 (278)
Q Consensus       228 ~i~~~D~a~~~~~~~~~~~--~~~~~-~~~~  255 (278)
                      +.+++|+|+++++++....  ..|.. .+.+
T Consensus       255 ~~~p~dvA~~v~~L~s~~~~~itG~~i~vdG  285 (291)
T 3ijr_A          255 PGQPYELAPAYVYLASSDSSYVTGQMIHVNG  285 (291)
T ss_dssp             CBCGGGTHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             CcCHHHHHHHHHHHhCCccCCCcCCEEEECC
Confidence            7899999999999986543  34654 4443

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.96  E-value=7.6e-28  Score=196.50  Aligned_cols=224  Identities=16%  Similarity=0.120  Sum_probs=159.2

Q ss_pred             cccccCCceEEEeCcch-hhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc-
Q 023689            3 SEAEKEEETVCVTGANG-FIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-   79 (278)
Q Consensus         3 ~m~~~~~~~vlItGatG-~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-   79 (278)
                      .|..+++|++|||||+| +||++++++|+++|+ .|++..|+.+..+... .+......++.++++|++|++++.++++ 
T Consensus        16 ~~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~   94 (266)
T 3o38_A           16 GHGLLKGKVVLVTAAAGTGIGSTTARRALLEGA-DVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQ   94 (266)
T ss_dssp             CCSTTTTCEEEESSCSSSSHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCCCchHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHH
Confidence            45567789999999997 799999999999999 8988888765433221 1211122289999999999999888876 


Q ss_pred             ------CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHhc-----CCCEEEEecceeeeecCCCCCCc
Q 023689           80 ------GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF-----GVRRVVVTSSISAIVPNPGWKGK  144 (278)
Q Consensus        80 ------~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~-----~~~~~v~~Ss~~~~~~~~~~~~~  144 (278)
                            ++|+|||+||.....    ...++++..+++|+.++.++++++...     +.++||++||..++.+.+..   
T Consensus        95 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~---  171 (266)
T 3o38_A           95 TVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQ---  171 (266)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCTTC---
T ss_pred             HHHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCCCC---
Confidence                  579999999975542    233467889999999999999887543     45789999998776554332   


Q ss_pred             cccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcc
Q 023689          145 VFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ  221 (278)
Q Consensus       145 ~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~  221 (278)
                                       ..|+.+|.+.+.+.+.++.+   +|+++++++||.+.++......  ............    
T Consensus       172 -----------------~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~----  228 (266)
T 3o38_A          172 -----------------SHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTS--SSELLDRLASDE----  228 (266)
T ss_dssp             -----------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-------------------CC----
T ss_pred             -----------------chHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccC--cHHHHHHHHhcC----
Confidence                             57999999999999988876   5999999999999998644321  111112222222    


Q ss_pred             cccccCcccHHHHHHHHHhhhcCCC--CCceE-EecC
Q 023689          222 EYHWLGAVPVKDVAKAQVLLFESPA--ASGRY-LCTN  255 (278)
Q Consensus       222 ~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~-~~~~  255 (278)
                        ....+.+++|+|+++++++....  ..|.+ .+.+
T Consensus       229 --~~~r~~~~~dva~~i~~l~s~~~~~~tG~~i~vdg  263 (266)
T 3o38_A          229 --AFGRAAEPWEVAATIAFLASDYSSYMTGEVVSVSS  263 (266)
T ss_dssp             --TTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             --CcCCCCCHHHHHHHHHHHcCccccCccCCEEEEcC
Confidence              24667899999999999987543  34654 4443

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.96  E-value=1.2e-27  Score=194.93  Aligned_cols=214  Identities=17%  Similarity=0.124  Sum_probs=158.0

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc----
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~----   79 (278)
                      |+.+++|++|||||+|+||++++++|+++|+ .|+++.|+.+.          . .++.++++|++|+++++++++    
T Consensus         3 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~----------~-~~~~~~~~Dl~~~~~v~~~~~~~~~   70 (264)
T 2dtx_A            3 FSDLRDKVVIVTGASMGIGRAIAERFVDEGS-KVIDLSIHDPG----------E-AKYDHIECDVTNPDQVKASIDHIFK   70 (264)
T ss_dssp             CGGGTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSCCC----------S-CSSEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEecCccc----------C-CceEEEEecCCCHHHHHHHHHHHHH
Confidence            4557789999999999999999999999999 89988887653          0 178899999999999888876    


Q ss_pred             ---CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHh----cCCCEEEEecceeeeecCCCCCCccccC
Q 023689           80 ---GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (278)
Q Consensus        80 ---~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~E  148 (278)
                         ++|+|||+||.....    ...+.++..+++|+.++.++++++.+    ++.++||++||..++.+.+.        
T Consensus        71 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------  142 (264)
T 2dtx_A           71 EYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKN--------  142 (264)
T ss_dssp             HHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCTT--------
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCCC--------
Confidence               689999999975432    23346788999999998888887743    45689999999777544322        


Q ss_pred             CCCCchhhhhccCchhhhHHHHHHHHHHHHHHhcC--CceEEEecceeeCCCCCCCCc----hhH----HHHHHHhhCCC
Q 023689          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHG--VDVVAIHPATCLGPLMQPYLN----ASC----AVLQQLLQGSK  218 (278)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~--~~~~~lrp~~i~g~~~~~~~~----~~~----~~~~~~~~~~~  218 (278)
                                  ...|+.+|...+.+.+.++.+.+  +++++++||.+.++.......    ...    ..........|
T Consensus       143 ------------~~~Y~~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  210 (264)
T 2dtx_A          143 ------------ASAYVTSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHP  210 (264)
T ss_dssp             ------------BHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHST
T ss_pred             ------------chhHHHHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhcCC
Confidence                        15799999999999999887654  999999999998764211000    000    11112222222


Q ss_pred             CcccccccCcccHHHHHHHHHhhhcCCC--CCce-EEecC
Q 023689          219 DTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGR-YLCTN  255 (278)
Q Consensus       219 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~  255 (278)
                            ...+++++|+|+++++++....  ..|. +.+.+
T Consensus       211 ------~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdG  244 (264)
T 2dtx_A          211 ------MQRIGKPQEVASAVAFLASREASFITGTCLYVDG  244 (264)
T ss_dssp             ------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             ------CCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECC
Confidence                  3468999999999999987543  3464 44443

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.96  E-value=4.5e-28  Score=195.88  Aligned_cols=217  Identities=18%  Similarity=0.165  Sum_probs=152.4

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCC-CCCcc-cccCCCCCCCceEEEEccCCChhhHHHHhc----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG-SDSSH-LFALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~-~~~~~-~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~----   79 (278)
                      .+++|++|||||+|+||++++++|+++|+ .|++..|++ +..+. +...   . .++.++++|++|+++++++++    
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~---~-~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (249)
T 2ew8_A            4 RLKDKLAVITGGANGIGRAIAERFAVEGA-DIAIADLVPAPEAEAAIRNL---G-RRVLTVKCDVSQPGDVEAFGKQVIS   78 (249)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHT---T-CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCchhHHHHHHHhc---C-CcEEEEEeecCCHHHHHHHHHHHHH
Confidence            45678999999999999999999999999 898888876 32221 1111   1 278899999999999888764    


Q ss_pred             ---CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHH----HHhcCCCEEEEecceeeeecCCCCCCccccC
Q 023689           80 ---GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEA----AKRFGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (278)
Q Consensus        80 ---~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~----~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E  148 (278)
                         ++|+|||+||.....    ...++++..+++|+.++.+++++    +++++.++||++||..++.+.+..       
T Consensus        79 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------  151 (249)
T 2ew8_A           79 TFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAY-------  151 (249)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSC-------
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCc-------
Confidence               689999999975432    23346788999999998777776    556667899999998776543321       


Q ss_pred             CCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCC-CCCchhHHHHHHHhhCCCCccccc
Q 023689          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQ-PYLNASCAVLQQLLQGSKDTQEYH  224 (278)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  224 (278)
                                   ..|+.+|...+.+.+.++.+   +|+++++++||.+.++... ......    .......  .  ..
T Consensus       152 -------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~----~~~~~~~--~--~~  210 (249)
T 2ew8_A          152 -------------THYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAM----FDVLPNM--L--QA  210 (249)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC----------------------CT--T--SS
T ss_pred             -------------hhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccch----hhHHHHh--h--Cc
Confidence                         57999999999999888875   4899999999999998643 110000    0001100  0  11


Q ss_pred             ccCcccHHHHHHHHHhhhcCCC--CCceE-EecC
Q 023689          225 WLGAVPVKDVAKAQVLLFESPA--ASGRY-LCTN  255 (278)
Q Consensus       225 ~~~~i~~~D~a~~~~~~~~~~~--~~~~~-~~~~  255 (278)
                      ...+.+++|+|+++++++....  ..|.. .+.+
T Consensus       211 ~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdG  244 (249)
T 2ew8_A          211 IPRLQVPLDLTGAAAFLASDDASFITGQTLAVDG  244 (249)
T ss_dssp             SCSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESS
T ss_pred             cCCCCCHHHHHHHHHHHcCcccCCCCCcEEEECC
Confidence            3457899999999999986532  34644 4443

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.96  E-value=6e-28  Score=196.08  Aligned_cols=218  Identities=22%  Similarity=0.217  Sum_probs=158.2

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc------
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~------   79 (278)
                      ++++|++|||||+|+||++++++|.++|+ .|++..|+.+..  ...+.    .++.++++|++|++++.++++      
T Consensus         6 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~--~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~~~g   78 (257)
T 3tl3_A            6 EIRDAVAVVTGGASGLGLATTKRLLDAGA-QVVVLDIRGEDV--VADLG----DRARFAAADVTDEAAVASALDLAETMG   78 (257)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCHHH--HHHTC----TTEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             eecCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCchHHH--HHhcC----CceEEEECCCCCHHHHHHHHHHHHHhC
Confidence            56789999999999999999999999999 888888854321  12221    178999999999999988876      


Q ss_pred             CccEEEEecccCCC--------CCCCCchhhhhhhHHhHHHHHHHHHHh------------cCCCEEEEecceeeeecCC
Q 023689           80 GCKGVFHVASPCTL--------EDPVDPEKELILPAVQGTLNVLEAAKR------------FGVRRVVVTSSISAIVPNP  139 (278)
Q Consensus        80 ~~d~vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~ll~~~~~------------~~~~~~v~~Ss~~~~~~~~  139 (278)
                      ++|++|||||....        +...+.++..+++|+.++.++++++..            .+.+++|++||..++.+.+
T Consensus        79 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  158 (257)
T 3tl3_A           79 TLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQI  158 (257)
T ss_dssp             CEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCHH
T ss_pred             CCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCCC
Confidence            78999999996432        133456889999999999999988854            2345899999977754422


Q ss_pred             CCCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhC
Q 023689          140 GWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQG  216 (278)
Q Consensus       140 ~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~  216 (278)
                      .                    ...|+.||.+.+.+.+.++.+   +|+++++++||.|.++.....   ...........
T Consensus       159 ~--------------------~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~  215 (257)
T 3tl3_A          159 G--------------------QAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASL---PEEARASLGKQ  215 (257)
T ss_dssp             H--------------------HHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC------CHHHHHHHHHT
T ss_pred             C--------------------CccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhc---cHHHHHHHHhc
Confidence            1                    157999999999888888765   489999999999999875432   12222333333


Q ss_pred             CCCcccccccCcccHHHHHHHHHhhhcCCCCCceEEecCccc
Q 023689          217 SKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGRYLCTNGIY  258 (278)
Q Consensus       217 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~~~  258 (278)
                      .+.     ...+.+++|+|+++++++.++...|..+..++.+
T Consensus       216 ~~~-----~~r~~~p~dva~~v~~l~s~~~itG~~i~vdGG~  252 (257)
T 3tl3_A          216 VPH-----PSRLGNPDEYGALAVHIIENPMLNGEVIRLDGAI  252 (257)
T ss_dssp             SSS-----SCSCBCHHHHHHHHHHHHHCTTCCSCEEEESTTC
T ss_pred             CCC-----CCCccCHHHHHHHHHHHhcCCCCCCCEEEECCCc
Confidence            332     2567899999999999998766667654433333

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.96  E-value=3.2e-28  Score=197.81  Aligned_cols=228  Identities=18%  Similarity=0.138  Sum_probs=155.8

Q ss_pred             cccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEec-CCCCCccc-ccCCCCCCCceEEEEccCCChhhHHHHhc-
Q 023689            3 SEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVF-PGSDSSHL-FALPGAGDANLRVFEADVLDSGAVSRAVE-   79 (278)
Q Consensus         3 ~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r-~~~~~~~~-~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-   79 (278)
                      +|+.+++|++|||||+|+||++++++|.++|+ .|++..+ +.+..... ..+..... ++.++++|++|+++++++++ 
T Consensus         2 ~~~~l~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~   79 (259)
T 3edm_A            2 SLQRFTNRTIVVAGAGRDIGRACAIRFAQEGA-NVVLTYNGAAEGAATAVAEIEKLGR-SALAIKADLTNAAEVEAAISA   79 (259)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSSCHHHHHHHHHHHTTTS-CCEEEECCTTCHHHHHHHHHH
T ss_pred             CccCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHH
Confidence            35578889999999999999999999999999 7777744 43322221 11111122 78899999999999988876 


Q ss_pred             ------CccEEEEecccCCC-----CCCCCchhhhhhhHHhHHHHHHHHHHhcC--CCEEEEecceeee-ecCCCCCCcc
Q 023689           80 ------GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAKRFG--VRRVVVTSSISAI-VPNPGWKGKV  145 (278)
Q Consensus        80 ------~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~v~~Ss~~~~-~~~~~~~~~~  145 (278)
                            ++|++||+||....     +...+.++..+++|+.++.++++++.+.-  .+++|++||..++ .+.+..    
T Consensus        80 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~----  155 (259)
T 3edm_A           80 AADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGGGPGA----  155 (259)
T ss_dssp             HHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCCSTTC----
T ss_pred             HHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCCCCCc----
Confidence                  68999999986522     22334568899999999999999997753  3489999998776 332221    


Q ss_pred             ccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc--CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccc
Q 023689          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (278)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (278)
                                      ..|+.+|.+.+.+.+.++.+.  ++++++++||.+.++.......  ...........      
T Consensus       156 ----------------~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~~--~~~~~~~~~~~------  211 (259)
T 3edm_A          156 ----------------LAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFTK--PEVRERVAGAT------  211 (259)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC---------------------------
T ss_pred             ----------------HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcccccccC--hHHHHHHHhcC------
Confidence                            579999999999999988765  3999999999999886443210  11111111111      


Q ss_pred             cccCcccHHHHHHHHHhhhcCCCC--Cce-EEecCccccH
Q 023689          224 HWLGAVPVKDVAKAQVLLFESPAA--SGR-YLCTNGIYQF  260 (278)
Q Consensus       224 ~~~~~i~~~D~a~~~~~~~~~~~~--~~~-~~~~~~~~s~  260 (278)
                      ....+.+++|+|+++++++.....  .|. +.+.++...+
T Consensus       212 p~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGg~~~~  251 (259)
T 3edm_A          212 SLKREGSSEDVAGLVAFLASDDAAYVTGACYDINGGVLFS  251 (259)
T ss_dssp             ---CCBCHHHHHHHHHHHHSGGGTTCCSCEEEESBCSSBC
T ss_pred             CCCCCcCHHHHHHHHHHHcCccccCccCCEEEECCCcCCC
Confidence            245678999999999999875432  464 5565554433

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.95  E-value=1.5e-27  Score=189.43  Aligned_cols=190  Identities=16%  Similarity=0.100  Sum_probs=141.2

Q ss_pred             CceEEEeCcchhhHHHHHHHHH-HCCCCeEEEEecCCC-CCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689            9 EETVCVTGANGFIGTWLVKTLL-DNNYTSINATVFPGS-DSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~-~~g~~~v~~~~r~~~-~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      ||+||||||||+||++++++|+ +.|+ .|+++.|+++ ..+.+...   . .+++++.+|++|++++.++++++|+|||
T Consensus         5 mk~vlVtGasg~iG~~~~~~l~~~~g~-~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~D~~d~~~~~~~~~~~d~vv~   79 (221)
T 3r6d_A            5 YXYITILGAAGQIAQXLTATLLTYTDM-HITLYGRQLKTRIPPEIID---H-ERVTVIEGSFQNPGXLEQAVTNAEVVFV   79 (221)
T ss_dssp             CSEEEEESTTSHHHHHHHHHHHHHCCC-EEEEEESSHHHHSCHHHHT---S-TTEEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred             EEEEEEEeCCcHHHHHHHHHHHhcCCc-eEEEEecCccccchhhccC---C-CceEEEECCCCCHHHHHHHHcCCCEEEE
Confidence            4569999999999999999999 8999 8999999866 44433111   1 1899999999999999999999999999


Q ss_pred             ecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCc-hhh
Q 023689           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK-WYP  165 (278)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~-~y~  165 (278)
                      +|+..               |+. +.++++++++.++++||++||..++...+..    ..      ..+ ..... .|+
T Consensus        80 ~ag~~---------------n~~-~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~----~~------~~~-~~~~~~~y~  132 (221)
T 3r6d_A           80 GAMES---------------GSD-MASIVKALSRXNIRRVIGVSMAGLSGEFPVA----LE------KWT-FDNLPISYV  132 (221)
T ss_dssp             SCCCC---------------HHH-HHHHHHHHHHTTCCEEEEEEETTTTSCSCHH----HH------HHH-HHTSCHHHH
T ss_pred             cCCCC---------------Chh-HHHHHHHHHhcCCCeEEEEeeceecCCCCcc----cc------ccc-ccccccHHH
Confidence            99752               444 8999999999999999999997664432210    00      001 11123 799


Q ss_pred             hHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHHHHHHHHHhhh--c
Q 023689          166 VSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLF--E  243 (278)
Q Consensus       166 ~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~--~  243 (278)
                      .+|...|.+++    +++++++++|||.++++.........       ..+.+     ....+++.+|+|++++.++  .
T Consensus       133 ~~K~~~e~~~~----~~~i~~~~vrpg~v~~~~~~~~~~~~-------~~~~~-----~~~~~~~~~dvA~~~~~l~~~~  196 (221)
T 3r6d_A          133 QGERQARNVLR----ESNLNYTILRLTWLYNDPEXTDYELI-------PEGAQ-----FNDAQVSREAVVKAIFDILHAA  196 (221)
T ss_dssp             HHHHHHHHHHH----HSCSEEEEEEECEEECCTTCCCCEEE-------CTTSC-----CCCCEEEHHHHHHHHHHHHTCS
T ss_pred             HHHHHHHHHHH----hCCCCEEEEechhhcCCCCCcceeec-------cCCcc-----CCCceeeHHHHHHHHHHHHHhc
Confidence            99999998885    57999999999999998332211100       00111     1234899999999999999  7


Q ss_pred             CCC
Q 023689          244 SPA  246 (278)
Q Consensus       244 ~~~  246 (278)
                      ++.
T Consensus       197 ~~~  199 (221)
T 3r6d_A          197 DET  199 (221)
T ss_dssp             CCG
T ss_pred             Chh
Confidence            654

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.95  E-value=4e-28  Score=196.01  Aligned_cols=219  Identities=15%  Similarity=0.104  Sum_probs=163.7

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      ++++|++|||||+|+||++++++|+++|+ +|++..|+.+..+.+.. +.... .++.++.+|++|+++++++++     
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (247)
T 3lyl_A            2 SLNEKVALVTGASRGIGFEVAHALASKGA-TVVGTATSQASAEKFENSMKEKG-FKARGLVLNISDIESIQNFFAEIKAE   79 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CceEEEEecCCCHHHHHHHHHHHHHH
Confidence            35679999999999999999999999999 89999887654333221 11111 278999999999999888876     


Q ss_pred             --CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHh----cCCCEEEEecceeeeecCCCCCCccccCC
Q 023689           80 --GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (278)
Q Consensus        80 --~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~  149 (278)
                        ++|+|||+||.....    ...++++..+++|+.++.++++++.+    .+.+++|++||..+..+.+..        
T Consensus        80 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------  151 (247)
T 3lyl_A           80 NLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQ--------  151 (247)
T ss_dssp             TCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTC--------
T ss_pred             cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCc--------
Confidence              479999999976542    23456788999999999998887643    456799999998877654432        


Q ss_pred             CCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccccc
Q 023689          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (278)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (278)
                                  ..|+.+|.+.+.+.+.++.+   +|+++++++||.+.++......   ...........+      ..
T Consensus       152 ------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~~------~~  210 (247)
T 3lyl_A          152 ------------TNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLT---DEQKSFIATKIP------SG  210 (247)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSC---HHHHHHHHTTST------TC
T ss_pred             ------------HHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhcc---HHHHHHHhhcCC------CC
Confidence                        57999999999888888875   4899999999999998765432   122222222222      46


Q ss_pred             CcccHHHHHHHHHhhhcCCC--CCce-EEecC
Q 023689          227 GAVPVKDVAKAQVLLFESPA--ASGR-YLCTN  255 (278)
Q Consensus       227 ~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~  255 (278)
                      .+.+++|+|+++++++....  ..|. +++.+
T Consensus       211 ~~~~~~dva~~i~~l~s~~~~~~tG~~i~vdg  242 (247)
T 3lyl_A          211 QIGEPKDIAAAVAFLASEEAKYITGQTLHVNG  242 (247)
T ss_dssp             CCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCcCHHHHHHHHHHHhCCCcCCccCCEEEECC
Confidence            78899999999999986543  2464 44443

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.95  E-value=1.1e-27  Score=193.49  Aligned_cols=211  Identities=20%  Similarity=0.140  Sum_probs=152.6

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCC--CCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc------
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNN--YTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g--~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~------   79 (278)
                      ++|++|||||+|+||++++++|+++|  + .|+++.|+.+..+.+..+   ...++.++.+|++|++++.++++      
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~g~~~-~V~~~~r~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (250)
T 1yo6_A            2 SPGSVVVTGANRGIGLGLVQQLVKDKNIR-HIIATARDVEKATELKSI---KDSRVHVLPLTVTCDKSLDTFVSKVGEIV   77 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCC-EEEEEESSGGGCHHHHTC---CCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCchHHHHHHHHHHhcCCCc-EEEEEecCHHHHHHHHhc---cCCceEEEEeecCCHHHHHHHHHHHHHhc
Confidence            35899999999999999999999999  8 899999987665544433   12278999999999999988876      


Q ss_pred             ---CccEEEEecccCC-C----CCCCCchhhhhhhHHhHHHHHHHHHHhc----------C-----CCEEEEecceeeee
Q 023689           80 ---GCKGVFHVASPCT-L----EDPVDPEKELILPAVQGTLNVLEAAKRF----------G-----VRRVVVTSSISAIV  136 (278)
Q Consensus        80 ---~~d~vi~~a~~~~-~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~----------~-----~~~~v~~Ss~~~~~  136 (278)
                         ++|+|||+||... .    +...+.++..+++|+.++.++++++...          +     .++||++||..++.
T Consensus        78 g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~  157 (250)
T 1yo6_A           78 GSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSI  157 (250)
T ss_dssp             GGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCS
T ss_pred             CCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCcccc
Confidence               7999999999765 2    2233456888999999999988877442          4     68999999987765


Q ss_pred             cCCCCCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCchhHHHHHHH
Q 023689          137 PNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQL  213 (278)
Q Consensus       137 ~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~  213 (278)
                      +...       +..+.      .+...|+.+|.+.+.+.+.++.+.   |+++++++||.+.++....            
T Consensus       158 ~~~~-------~~~~~------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~------------  212 (250)
T 1yo6_A          158 TDNT-------SGSAQ------FPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK------------  212 (250)
T ss_dssp             TTCC-------STTSS------SCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-------------------
T ss_pred             CCcc-------ccccc------CCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC------------
Confidence            4321       01110      112579999999999999988765   8999999999998875321            


Q ss_pred             hhCCCCcccccccCcccHHHHHHHHHhhhcCCC--CCceEEe-cCcccc
Q 023689          214 LQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLC-TNGIYQ  259 (278)
Q Consensus       214 ~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~-~~~~~s  259 (278)
                                  ..+++++|+|+.++.++....  ..|.|+. .++.++
T Consensus       213 ------------~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~~~  249 (250)
T 1yo6_A          213 ------------NAALTVEQSTAELISSFNKLDNSHNGRFFMRNLKPYE  249 (250)
T ss_dssp             ------------------HHHHHHHHHHHTTCCGGGTTCEEETTEEECC
T ss_pred             ------------CCCCCHHHHHHHHHHHHhcccccCCCeEEEECCcCCC
Confidence                        135789999999999998754  3466654 333333

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.95  E-value=3.6e-28  Score=199.30  Aligned_cols=221  Identities=17%  Similarity=0.160  Sum_probs=161.3

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc------
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~------   79 (278)
                      .+++|++|||||+|+||++++++|+++|+ .|++..|+.+.........  . .++.++++|++|+++++++++      
T Consensus        24 ~l~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~--~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~   99 (277)
T 4dqx_A           24 DLNQRVCIVTGGGSGIGRATAELFAKNGA-YVVVADVNEDAAVRVANEI--G-SKAFGVRVDVSSAKDAESMVEKTTAKW   99 (277)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHH--C-TTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh--C-CceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            46789999999999999999999999999 8888888765433322111  1 178899999999999888876      


Q ss_pred             -CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccCCC
Q 023689           80 -GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (278)
Q Consensus        80 -~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~  150 (278)
                       ++|++||+||.....    ...+.++..+++|+.|+.++++++    ++.+.++||++||..++.+.+..         
T Consensus       100 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  170 (277)
T 4dqx_A          100 GRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADR---------  170 (277)
T ss_dssp             SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCTTB---------
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCCCC---------
Confidence             689999999975442    233567888999999998888877    44556799999998776554332         


Q ss_pred             CCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCC---CchhHHHHHHHhhCCCCccccc
Q 023689          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPY---LNASCAVLQQLLQGSKDTQEYH  224 (278)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~  224 (278)
                                 ..|+.||.+.+.+.+.++.+.   |+++++++||.+.++.....   ...............+      
T Consensus       171 -----------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~------  233 (277)
T 4dqx_A          171 -----------TAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAV------  233 (277)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTST------
T ss_pred             -----------hhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcCc------
Confidence                       579999999999998888654   89999999999988741110   0111122222223222      


Q ss_pred             ccCcccHHHHHHHHHhhhcCCC--CCce-EEecCc
Q 023689          225 WLGAVPVKDVAKAQVLLFESPA--ASGR-YLCTNG  256 (278)
Q Consensus       225 ~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  256 (278)
                      ...+.+++|+|+++++++....  ..|. +.+.++
T Consensus       234 ~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  268 (277)
T 4dqx_A          234 MDRMGTAEEIAEAMLFLASDRSRFATGSILTVDGG  268 (277)
T ss_dssp             TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             ccCCcCHHHHHHHHHHHhCCccCCCcCCEEEECCc
Confidence            4567899999999999987543  3464 444443

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.95  E-value=2.2e-28  Score=204.70  Aligned_cols=217  Identities=13%  Similarity=0.092  Sum_probs=156.5

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCC-cccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEec
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-SHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~-~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a   88 (278)
                      |+||||||||+||++++++|+++|+ .|++++|++... ..+..+.   ..+++++++|++|++++.++++++|+|||++
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~~~~l~---~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a   87 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGH-PTYVFTRPNSSKTTLLDEFQ---SLGAIIVKGELDEHEKLVELMKKVDVVISAL   87 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTC-CEEEEECTTCSCHHHHHHHH---HTTCEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCC-cEEEEECCCCchhhHHHHhh---cCCCEEEEecCCCHHHHHHHHcCCCEEEECC
Confidence            5899999999999999999999998 899999987522 1111110   0178999999999999999999999999999


Q ss_pred             ccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcC-CCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhhH
Q 023689           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVS  167 (278)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~s  167 (278)
                      +...               +.++.+++++|++.+ +++||+ |+ .   +..      .+|..+..+.     ...| .+
T Consensus        88 ~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S~-~---g~~------~~~~~~~~p~-----~~~y-~s  135 (318)
T 2r6j_A           88 AFPQ---------------ILDQFKILEAIKVAGNIKRFLP-SD-F---GVE------EDRINALPPF-----EALI-ER  135 (318)
T ss_dssp             CGGG---------------STTHHHHHHHHHHHCCCCEEEC-SC-C---SSC------TTTCCCCHHH-----HHHH-HH
T ss_pred             chhh---------------hHHHHHHHHHHHhcCCCCEEEe-ec-c---ccC------cccccCCCCc-----chhH-HH
Confidence            7521               456789999999998 999985 43 1   111      1222222221     1468 99


Q ss_pred             HHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcc---cccccCcccHHHHHHHHHhhhcC
Q 023689          168 KTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ---EYHWLGAVPVKDVAKAQVLLFES  244 (278)
Q Consensus       168 K~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~D~a~~~~~~~~~  244 (278)
                      |...|++++    +.+++++++||+.+++..       ...++.....+.....   ++..+++++++|+|++++.++.+
T Consensus       136 K~~~e~~~~----~~~~~~~~lr~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~  204 (318)
T 2r6j_A          136 KRMIRRAIE----EANIPYTYVSANCFASYF-------INYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATD  204 (318)
T ss_dssp             HHHHHHHHH----HTTCCBEEEECCEEHHHH-------HHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHH----hcCCCeEEEEcceehhhh-------hhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcC
Confidence            999998875    579999999998877641       1111111112222111   34678999999999999999987


Q ss_pred             CCCCc-eE-Eec-CccccHHHHHHHHHHhCCC
Q 023689          245 PAASG-RY-LCT-NGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       245 ~~~~~-~~-~~~-~~~~s~~e~~~~i~~~~~~  273 (278)
                      +...+ .+ +.+ ++.+|+.|+++.+.+.+++
T Consensus       205 ~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~  236 (318)
T 2r6j_A          205 PRALNRVVIYRPSTNIITQLELISRWEKKIGK  236 (318)
T ss_dssp             GGGTTEEEECCCGGGEEEHHHHHHHHHHHHTC
T ss_pred             ccccCeEEEecCCCCccCHHHHHHHHHHHhCC
Confidence            65434 44 444 4689999999999998853

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.95  E-value=9.4e-28  Score=196.84  Aligned_cols=219  Identities=13%  Similarity=0.063  Sum_probs=159.9

Q ss_pred             ccccCCceEEEeCcc--hhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc--
Q 023689            4 EAEKEEETVCVTGAN--GFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--   79 (278)
Q Consensus         4 m~~~~~~~vlItGat--G~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--   79 (278)
                      |..+++|++|||||+  |+||++++++|+++|+ .|++..|+.+..+.+..+..... ++.++.+|++|++++.++++  
T Consensus         1 M~~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~v~~~~~~~   78 (275)
T 2pd4_A            1 MGFLKGKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLNESLEKRVRPIAQELN-SPYVYELDVSKEEHFKSLYNSV   78 (275)
T ss_dssp             -CTTTTCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESSTTTHHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CcEEEEcCCCCHHHHHHHHHHH
Confidence            344667999999999  9999999999999999 89999887652222222211111 47789999999999888876  


Q ss_pred             -----CccEEEEecccCCC--------CCCCCchhhhhhhHHhHHHHHHHHHHhc--CCCEEEEecceeeeecCCCCCCc
Q 023689           80 -----GCKGVFHVASPCTL--------EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGK  144 (278)
Q Consensus        80 -----~~d~vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~  144 (278)
                           ++|++||+||....        +...++++..+++|+.++.++++++.+.  ..++||++||..+..+.+..   
T Consensus        79 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~---  155 (275)
T 2pd4_A           79 KKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHY---  155 (275)
T ss_dssp             HHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTC---
T ss_pred             HHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCCCCCc---
Confidence                 67999999997542        2234567889999999999999999775  12689999997775543321   


Q ss_pred             cccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcc
Q 023689          145 VFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ  221 (278)
Q Consensus       145 ~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~  221 (278)
                                       ..|+.+|.+.+.+.+.++.+.   |+++++++||.|.++...... .............|   
T Consensus       156 -----------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~p---  214 (275)
T 2pd4_A          156 -----------------NVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIA-DFRMILKWNEINAP---  214 (275)
T ss_dssp             -----------------HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGST-THHHHHHHHHHHST---
T ss_pred             -----------------hhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhcc-ccHHHHHHHHhcCC---
Confidence                             579999999999998888764   899999999999998643321 11222233322222   


Q ss_pred             cccccCcccHHHHHHHHHhhhcCCC--CCceE
Q 023689          222 EYHWLGAVPVKDVAKAQVLLFESPA--ASGRY  251 (278)
Q Consensus       222 ~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~  251 (278)
                         ...+.+++|+|+++++++....  ..|.+
T Consensus       215 ---~~~~~~p~dva~~~~~l~s~~~~~~tG~~  243 (275)
T 2pd4_A          215 ---LRKNVSLEEVGNAGMYLLSSLSSGVSGEV  243 (275)
T ss_dssp             ---TSSCCCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             ---cCCCCCHHHHHHHHHHHhCccccCCCCCE
Confidence               2346799999999999986532  34654

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.95  E-value=1.6e-28  Score=201.57  Aligned_cols=225  Identities=16%  Similarity=0.080  Sum_probs=163.7

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc---
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE---   79 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---   79 (278)
                      |..+++|++|||||+|+||++++++|+++|+ .|++..|+.+...... .+......++.++++|++|+++++++++   
T Consensus        22 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  100 (277)
T 4fc7_A           22 PDLLRDKVAFITGGGSGIGFRIAEIFMRHGC-HTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQAL  100 (277)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            4456789999999999999999999999999 8888888754432221 1110011278999999999999888876   


Q ss_pred             ----CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHHH----hcCCCEEEEecceeeeecCCCCCCcccc
Q 023689           80 ----GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFD  147 (278)
Q Consensus        80 ----~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~  147 (278)
                          ++|++||+||....    +...+.++..+++|+.++.++++++.    +.+.++||++||..+..+.+..      
T Consensus       101 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~------  174 (277)
T 4fc7_A          101 KEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQ------  174 (277)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCTTC------
T ss_pred             HHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCc------
Confidence                68999999996543    22345678899999999999999873    3445799999998887665432      


Q ss_pred             CCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccc
Q 023689          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (278)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (278)
                                    ..|+.+|.+.+.+.+.++.+.   |+++++++||.|.++....................|      
T Consensus       175 --------------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p------  234 (277)
T 4fc7_A          175 --------------VHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASP------  234 (277)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTST------
T ss_pred             --------------HHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCC------
Confidence                          579999999999998888754   899999999999987421110111222333333333      


Q ss_pred             ccCcccHHHHHHHHHhhhcCCC--CCceE-EecC
Q 023689          225 WLGAVPVKDVAKAQVLLFESPA--ASGRY-LCTN  255 (278)
Q Consensus       225 ~~~~i~~~D~a~~~~~~~~~~~--~~~~~-~~~~  255 (278)
                      ...+.+++|+|+++++++....  ..|.. .+.+
T Consensus       235 ~~r~~~p~dvA~~v~fL~s~~~~~itG~~i~vdG  268 (277)
T 4fc7_A          235 LQRLGNKTEIAHSVLYLASPLASYVTGAVLVADG  268 (277)
T ss_dssp             TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCCcCHHHHHHHHHHHcCCccCCcCCCEEEECC
Confidence            3567899999999999987533  34644 4443

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.95  E-value=3.2e-27  Score=188.69  Aligned_cols=213  Identities=16%  Similarity=0.103  Sum_probs=158.4

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc-------Ccc
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GCK   82 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d   82 (278)
                      |+||||||+++||+++++.|.++|+ +|++.+|+.+....+.+.   .. ++.++++|++|+++++++++       ++|
T Consensus         3 K~vlVTGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~---~~-~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iD   77 (247)
T 3ged_A            3 RGVIVTGGGHGIGKQICLDFLEAGD-KVCFIDIDEKRSADFAKE---RP-NLFYFHGDVADPLTLKKFVEYAMEKLQRID   77 (247)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTT---CT-TEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHh---cC-CEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            7999999999999999999999999 888888876544333321   12 78899999999998888765       679


Q ss_pred             EEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHHH----hcCCCEEEEecceeeeecCCCCCCccccCCCCCch
Q 023689           83 GVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDL  154 (278)
Q Consensus        83 ~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~  154 (278)
                      ++|||||....    +...++|+..+++|+.++..+.+++.    +++ +++|++||..+..+.++.             
T Consensus        78 iLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-G~IInisS~~~~~~~~~~-------------  143 (247)
T 3ged_A           78 VLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNK-GRIINIASTRAFQSEPDS-------------  143 (247)
T ss_dssp             EEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGTSCCTTC-------------
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CcEEEEeecccccCCCCC-------------
Confidence            99999987554    33446789999999999988877663    334 799999998887665543             


Q ss_pred             hhhhccCchhhhHHHHHHHHHHHHHHhc--CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHH
Q 023689          155 EYCKSRKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVK  232 (278)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  232 (278)
                             ..|+.||.....+.+.++.+.  ++++++|.||.|-++.....       ..+.....|      ...+..++
T Consensus       144 -------~~Y~asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~~~-------~~~~~~~~P------l~R~g~pe  203 (247)
T 3ged_A          144 -------EAYASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQEF-------TQEDCAAIP------AGKVGTPK  203 (247)
T ss_dssp             -------HHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC---C-------CHHHHHTST------TSSCBCHH
T ss_pred             -------HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCcHHH-------HHHHHhcCC------CCCCcCHH
Confidence                   357777777766666666543  89999999999988764432       122223333      34567899


Q ss_pred             HHHHHHHhhhcCCCCCceEEecCccccHH
Q 023689          233 DVAKAQVLLFESPAASGRYLCTNGIYQFG  261 (278)
Q Consensus       233 D~a~~~~~~~~~~~~~~~~~~~~~~~s~~  261 (278)
                      |+|+++++++.+..-.|+.+..++.+|.+
T Consensus       204 diA~~v~fL~s~~~iTG~~i~VDGG~s~r  232 (247)
T 3ged_A          204 DISNMVLFLCQQDFITGETIIVDGGMSKR  232 (247)
T ss_dssp             HHHHHHHHHHHCSSCCSCEEEESTTGGGC
T ss_pred             HHHHHHHHHHhCCCCCCCeEEECcCHHHh
Confidence            99999999998655678766666666543

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.95  E-value=7.1e-28  Score=198.54  Aligned_cols=219  Identities=16%  Similarity=0.149  Sum_probs=157.4

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      .+++|++|||||+|+||+++++.|+++|+ .|++.+|+.+..+.+. .+.... .++.++.+|++|+++++++++     
T Consensus        41 ~l~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dl~d~~~v~~~~~~~~~~  118 (285)
T 2c07_A           41 CGENKVALVTGAGRGIGREIAKMLAKSVS-HVICISRTQKSCDSVVDEIKSFG-YESSGYAGDVSKKEEISEVINKILTE  118 (285)
T ss_dssp             CCSSCEEEEESTTSHHHHHHHHHHTTTSS-EEEEEESSHHHHHHHHHHHHTTT-CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcC-CceeEEECCCCCHHHHHHHHHHHHHh
Confidence            45678999999999999999999999999 8888887654332221 111111 278899999999999988874     


Q ss_pred             --CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHH----hcCCCEEEEecceeeeecCCCCCCccccCC
Q 023689           80 --GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (278)
Q Consensus        80 --~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~  149 (278)
                        ++|+|||+||.....    ...++++..+++|+.++.++++++.    +.+.++||++||..++++.+..        
T Consensus       119 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~--------  190 (285)
T 2c07_A          119 HKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQ--------  190 (285)
T ss_dssp             CSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTC--------
T ss_pred             cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCC--------
Confidence              689999999975432    2334678889999999777777664    4567899999998776654332        


Q ss_pred             CCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccccc
Q 023689          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (278)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (278)
                                  ..|+.+|.+.+.+.+.++.+   .|+++++++||.+.++.....   ............+      ..
T Consensus       191 ------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~------~~  249 (285)
T 2c07_A          191 ------------ANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKI---SEQIKKNIISNIP------AG  249 (285)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----C---CHHHHHHHHTTCT------TS
T ss_pred             ------------chHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhc---CHHHHHHHHhhCC------CC
Confidence                        57999999999998888765   489999999999999864432   1222233333222      24


Q ss_pred             CcccHHHHHHHHHhhhcCCC--CCce-EEecC
Q 023689          227 GAVPVKDVAKAQVLLFESPA--ASGR-YLCTN  255 (278)
Q Consensus       227 ~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~  255 (278)
                      .+++++|+|++++.++....  ..|. +.+.+
T Consensus       250 ~~~~~~dvA~~~~~l~~~~~~~~~G~~i~v~g  281 (285)
T 2c07_A          250 RMGTPEEVANLACFLSSDKSGYINGRVFVIDG  281 (285)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCCHHHHHHHHHHHhCCCcCCCCCCEEEeCC
Confidence            58899999999999987643  2454 44444

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.95  E-value=1.3e-27  Score=195.14  Aligned_cols=219  Identities=17%  Similarity=0.133  Sum_probs=155.5

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCC-CCCceEEEEccCCChhhHHHHhc----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGA-GDANLRVFEADVLDSGAVSRAVE----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~-~~~~v~~~~~Dl~d~~~~~~~~~----   79 (278)
                      .+++|++|||||+|+||++++++|+++|+ .|++..|+.+..+... .+... ...++.++.+|++|++++.++++    
T Consensus        10 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   88 (267)
T 1iy8_A           10 RFTDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTE   88 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            45679999999999999999999999999 8988888764432221 11000 01278899999999999988876    


Q ss_pred             ---CccEEEEecccCCC-----CCCCCchhhhhhhHHhHHHHHHHH----HHhcCCCEEEEecceeeeecCCCCCCcccc
Q 023689           80 ---GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEA----AKRFGVRRVVVTSSISAIVPNPGWKGKVFD  147 (278)
Q Consensus        80 ---~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~----~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~  147 (278)
                         ++|+|||+||....     +...++++..+++|+.++..+.++    +++++.++||++||..++.+.+..      
T Consensus        89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~------  162 (267)
T 1iy8_A           89 RFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQ------  162 (267)
T ss_dssp             HHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSB------
T ss_pred             HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCCCCC------
Confidence               68999999997543     122356788999999888765554    455677899999998776543321      


Q ss_pred             CCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCC-----CchhHHHHHHHhhCCCC
Q 023689          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPY-----LNASCAVLQQLLQGSKD  219 (278)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~-----~~~~~~~~~~~~~~~~~  219 (278)
                                    ..|+.+|...+.+.+.++.+   +|+++++++||.++++.....     ...............| 
T Consensus       163 --------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p-  227 (267)
T 1iy8_A          163 --------------SGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNP-  227 (267)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCT-
T ss_pred             --------------ccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccCC-
Confidence                          57999999999998888765   489999999999998752210     0001111112222222 


Q ss_pred             cccccccCcccHHHHHHHHHhhhcCCC--CCceE
Q 023689          220 TQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRY  251 (278)
Q Consensus       220 ~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~  251 (278)
                           ...+.+++|+|+++++++....  ..|..
T Consensus       228 -----~~r~~~~~dvA~~v~~l~s~~~~~~tG~~  256 (267)
T 1iy8_A          228 -----SKRYGEAPEIAAVVAFLLSDDASYVNATV  256 (267)
T ss_dssp             -----TCSCBCHHHHHHHHHHHTSGGGTTCCSCE
T ss_pred             -----CCCCcCHHHHHHHHHHHcCccccCCCCCE
Confidence                 3457899999999999986542  34644

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.95  E-value=1.9e-28  Score=200.15  Aligned_cols=219  Identities=19%  Similarity=0.136  Sum_probs=162.5

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      .+++|++|||||+|+||++++++|+++|+ .|++..|+.+..+.+.. +.... .++.++.+|++|+++++++++     
T Consensus        25 ~l~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~  102 (270)
T 3ftp_A           25 TLDKQVAIVTGASRGIGRAIALELARRGA-MVIGTATTEAGAEGIGAAFKQAG-LEGRGAVLNVNDATAVDALVESTLKE  102 (270)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHT-CCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEEeCCCHHHHHHHHHHHHHH
Confidence            46789999999999999999999999999 89999887654332211 11111 167899999999999888876     


Q ss_pred             --CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHH----hcCCCEEEEecceeeeecCCCCCCccccCC
Q 023689           80 --GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (278)
Q Consensus        80 --~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~  149 (278)
                        ++|++||+||.....    ...++++..+++|+.++.++++++.    +++.++||++||..++.+.+..        
T Consensus       103 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------  174 (270)
T 3ftp_A          103 FGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQ--------  174 (270)
T ss_dssp             HSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTB--------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCc--------
Confidence              689999999975542    2345678899999999999988774    3456789999998887665432        


Q ss_pred             CCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccccc
Q 023689          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (278)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (278)
                                  ..|+.+|.+.+.+.+.++.+   +|+++++++||.|.++.....   ............|      ..
T Consensus       175 ------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~~p------~~  233 (270)
T 3ftp_A          175 ------------VNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGL---PQEQQTALKTQIP------LG  233 (270)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHS---CHHHHHHHHTTCT------TC
T ss_pred             ------------hhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhc---CHHHHHHHHhcCC------CC
Confidence                        57999999999888888875   589999999999988753222   1122223333332      45


Q ss_pred             CcccHHHHHHHHHhhhcCCC--CCce-EEecC
Q 023689          227 GAVPVKDVAKAQVLLFESPA--ASGR-YLCTN  255 (278)
Q Consensus       227 ~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~  255 (278)
                      .+.+++|+|+++++++....  ..|. +++.+
T Consensus       234 r~~~pedvA~~v~~L~s~~~~~itG~~i~vdG  265 (270)
T 3ftp_A          234 RLGSPEDIAHAVAFLASPQAGYITGTTLHVNG  265 (270)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCCHHHHHHHHHHHhCCCcCCccCcEEEECC
Confidence            67899999999999986433  3464 44443

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.95  E-value=3.4e-28  Score=196.28  Aligned_cols=219  Identities=19%  Similarity=0.178  Sum_probs=161.5

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc----
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~----   79 (278)
                      |..+++|++|||||+|+||++++++|+++|+ .|++..|+.+..+......  . .++.++++|++|+++++++++    
T Consensus         1 ~~~l~gk~vlVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~--~-~~~~~~~~Dv~~~~~v~~~~~~~~~   76 (247)
T 3rwb_A            1 TERLAGKTALVTGAAQGIGKAIAARLAADGA-TVIVSDINAEGAKAAAASI--G-KKARAIAADISDPGSVKALFAEIQA   76 (247)
T ss_dssp             CCTTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHH--C-TTEEECCCCTTCHHHHHHHHHHHHH
T ss_pred             CCCcCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh--C-CceEEEEcCCCCHHHHHHHHHHHHH
Confidence            3467789999999999999999999999999 8888888765433322111  1 178999999999999988876    


Q ss_pred             ---CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHH----HHhcC-CCEEEEecceeeeecCCCCCCcccc
Q 023689           80 ---GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEA----AKRFG-VRRVVVTSSISAIVPNPGWKGKVFD  147 (278)
Q Consensus        80 ---~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~----~~~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~  147 (278)
                         ++|++||+||.....    ...++++..+++|+.++.+++++    +++++ .+++|++||..+..+.+..      
T Consensus        77 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~------  150 (247)
T 3rwb_A           77 LTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNM------  150 (247)
T ss_dssp             HHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTTC------
T ss_pred             HCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCCc------
Confidence               689999999976542    23356788999999999998887    45555 6799999998877665442      


Q ss_pred             CCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCc-hhHHHHHHHhhCCCCcccc
Q 023689          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN-ASCAVLQQLLQGSKDTQEY  223 (278)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~  223 (278)
                                    ..|+.+|...+.+.+.++.+   +|+++++++||.|.++....... ....+....   .+     
T Consensus       151 --------------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~---~~-----  208 (247)
T 3rwb_A          151 --------------AAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEML---QA-----  208 (247)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGGHHHHHHH---SS-----
T ss_pred             --------------hhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhHHHHHHhcc---cc-----
Confidence                          57999999999888888876   59999999999999875322211 111111110   11     


Q ss_pred             cccCcccHHHHHHHHHhhhcCCC--CCceE-EecC
Q 023689          224 HWLGAVPVKDVAKAQVLLFESPA--ASGRY-LCTN  255 (278)
Q Consensus       224 ~~~~~i~~~D~a~~~~~~~~~~~--~~~~~-~~~~  255 (278)
                       ...+.+++|+|+++++++....  ..|.. .+.+
T Consensus       209 -~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdG  242 (247)
T 3rwb_A          209 -MKGKGQPEHIADVVSFLASDDARWITGQTLNVDA  242 (247)
T ss_dssp             -SCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             -cCCCcCHHHHHHHHHHHhCccccCCCCCEEEECC
Confidence             3456789999999999987643  34654 4433

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.95  E-value=1.8e-28  Score=198.80  Aligned_cols=218  Identities=15%  Similarity=0.158  Sum_probs=136.9

Q ss_pred             cccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCCCCCCceEEEEccCCChhhHHHHhc----
Q 023689            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE----   79 (278)
Q Consensus         5 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~----   79 (278)
                      +.+++|++|||||+|+||++++++|+++|+ .|++..|+.+..+.+.. +.... .++.++.+|++|+++++++++    
T Consensus         5 ~~~~~k~vlITGas~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~   82 (253)
T 3qiv_A            5 MRFENKVGIVTGSGGGIGQAYAEALAREGA-AVVVADINAEAAEAVAKQIVADG-GTAISVAVDVSDPESAKAMADRTLA   82 (253)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT-CEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHH
Confidence            457789999999999999999999999999 89888887654333221 11111 278899999999999988876    


Q ss_pred             ---CccEEEEecccCCC-------CCCCCchhhhhhhHHhHHHHHHHH----HHhcCCCEEEEecceeeeecCCCCCCcc
Q 023689           80 ---GCKGVFHVASPCTL-------EDPVDPEKELILPAVQGTLNVLEA----AKRFGVRRVVVTSSISAIVPNPGWKGKV  145 (278)
Q Consensus        80 ---~~d~vi~~a~~~~~-------~~~~~~~~~~~~~n~~~~~~ll~~----~~~~~~~~~v~~Ss~~~~~~~~~~~~~~  145 (278)
                         ++|+|||+||....       +...+.++..+++|+.++.+++++    +++.+.++||++||..++.+        
T Consensus        83 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--------  154 (253)
T 3qiv_A           83 EFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWLY--------  154 (253)
T ss_dssp             HHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC--------------
T ss_pred             HcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccCC--------
Confidence               78999999987321       223356688999999996655554    45566789999999776421        


Q ss_pred             ccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccc
Q 023689          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQE  222 (278)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (278)
                                     ...|+.+|.+.+.+.+.++.+.   |+++++++||.++++......  ..........+.+    
T Consensus       155 ---------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~----  213 (253)
T 3qiv_A          155 ---------------SNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTT--PKEMVDDIVKGLP----  213 (253)
T ss_dssp             --------------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC-------------------------------
T ss_pred             ---------------CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcC--cHHHHHHHhccCC----
Confidence                           1469999999999999998875   899999999999998654321  1122222222222    


Q ss_pred             ccccCcccHHHHHHHHHhhhcCCCC--Cc-eEEecC
Q 023689          223 YHWLGAVPVKDVAKAQVLLFESPAA--SG-RYLCTN  255 (278)
Q Consensus       223 ~~~~~~i~~~D~a~~~~~~~~~~~~--~~-~~~~~~  255 (278)
                        ...+.+++|+|+++++++.....  .| .+++.+
T Consensus       214 --~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdg  247 (253)
T 3qiv_A          214 --LSRMGTPDDLVGMCLFLLSDEASWITGQIFNVDG  247 (253)
T ss_dssp             --------CCHHHHHHHHHHSGGGTTCCSCEEEC--
T ss_pred             --CCCCCCHHHHHHHHHHHcCccccCCCCCEEEECC
Confidence              34567899999999999875432  45 455443

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.95  E-value=9.4e-28  Score=193.46  Aligned_cols=213  Identities=17%  Similarity=0.193  Sum_probs=157.8

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHH-CCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc-----C
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLD-NNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----G   80 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~-~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----~   80 (278)
                      .+||++|||||+|+||++++++|++ .|+ .|++..|+.+....          .+.++++|++|++++.++++     +
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~-~v~~~~~~~~~~~~----------~~~~~~~Dv~~~~~v~~~~~~~~~~~   70 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNH-TVINIDIQQSFSAE----------NLKFIKADLTKQQDITNVLDIIKNVS   70 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTE-EEEEEESSCCCCCT----------TEEEEECCTTCHHHHHHHHHHTTTCC
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCc-EEEEeccccccccc----------cceEEecCcCCHHHHHHHHHHHHhCC
Confidence            3578999999999999999999999 677 88888876542211          77899999999999998886     7


Q ss_pred             ccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHHHhcC--CCEEEEecceeeeecCCCCCCccccCCCCCch
Q 023689           81 CKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKRFG--VRRVVVTSSISAIVPNPGWKGKVFDETSWTDL  154 (278)
Q Consensus        81 ~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~  154 (278)
                      +|++||+||....    +...++++..+++|+.++.++++++.+.-  .+++|++||..++.+.+..             
T Consensus        71 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~-------------  137 (244)
T 4e4y_A           71 FDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAKPNS-------------  137 (244)
T ss_dssp             EEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCCTTB-------------
T ss_pred             CCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCCCCC-------------
Confidence            8999999997543    22345678899999999999999987652  2589999998776554332             


Q ss_pred             hhhhccCchhhhHHHHHHHHHHHHHH---hcCCceEEEecceeeCCCCCCCCch--------hHHHHHHHhhCCCCcccc
Q 023689          155 EYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLNA--------SCAVLQQLLQGSKDTQEY  223 (278)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lrp~~i~g~~~~~~~~~--------~~~~~~~~~~~~~~~~~~  223 (278)
                             ..|+.||.+.+.+.+.++.   .+|+++++++||.|.++........        ............|     
T Consensus       138 -------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-----  205 (244)
T 4e4y_A          138 -------FAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFP-----  205 (244)
T ss_dssp             -------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTST-----
T ss_pred             -------chhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCC-----
Confidence                   4799999999999998887   4589999999999988753221000        0001222222222     


Q ss_pred             cccCcccHHHHHHHHHhhhcCCC--CCceEEecCc
Q 023689          224 HWLGAVPVKDVAKAQVLLFESPA--ASGRYLCTNG  256 (278)
Q Consensus       224 ~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~~  256 (278)
                       ...+.+++|+|+++++++....  ..|..+..++
T Consensus       206 -~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdG  239 (244)
T 4e4y_A          206 -LNRIAQPQEIAELVIFLLSDKSKFMTGGLIPIDG  239 (244)
T ss_dssp             -TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             -CCCCcCHHHHHHHHHHHhcCccccccCCeEeECC
Confidence             4568899999999999987543  3465443333

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.95  E-value=6.8e-28  Score=197.52  Aligned_cols=223  Identities=16%  Similarity=0.162  Sum_probs=164.0

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCCCCCCceEEEEccCCChhhHHHHhc---
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE---   79 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~---   79 (278)
                      |..+++|++|||||+|+||++++++|+++|+ .|++..|+.+..+.+.. +.... .++.++++|++|+++++++++   
T Consensus        27 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~v~~~~~~~~  104 (276)
T 3r1i_A           27 LFDLSGKRALITGASTGIGKKVALAYAEAGA-QVAVAARHSDALQVVADEIAGVG-GKALPIRCDVTQPDQVRGMLDQMT  104 (276)
T ss_dssp             GGCCTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTT-CCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CeEEEEEcCCCCHHHHHHHHHHHH
Confidence            3467789999999999999999999999999 89999987655443321 11112 278899999999999998876   


Q ss_pred             ----CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHh----cC-CCEEEEecceeeeecCCCCCCccc
Q 023689           80 ----GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FG-VRRVVVTSSISAIVPNPGWKGKVF  146 (278)
Q Consensus        80 ----~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~----~~-~~~~v~~Ss~~~~~~~~~~~~~~~  146 (278)
                          ++|++||+||.....    ...+.++..+++|+.++.++++++.+    ++ .+++|++||.++..+...      
T Consensus       105 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~------  178 (276)
T 3r1i_A          105 GELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIP------  178 (276)
T ss_dssp             HHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCS------
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCC------
Confidence                789999999976542    23356778889999999998887743    33 378999999776543211      


Q ss_pred             cCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccc
Q 023689          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (278)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (278)
                                  .....|+.||.+.+.+.+.++.+   +|+++++++||.|.++.......    .........|     
T Consensus       179 ------------~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~----~~~~~~~~~p-----  237 (276)
T 3r1i_A          179 ------------QQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLAD----YHALWEPKIP-----  237 (276)
T ss_dssp             ------------SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGG----GHHHHGGGST-----
T ss_pred             ------------CCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchH----HHHHHHhcCC-----
Confidence                        01257999999999999988876   58999999999999987543211    1222223222     


Q ss_pred             cccCcccHHHHHHHHHhhhcCCC--CCceE-EecCc
Q 023689          224 HWLGAVPVKDVAKAQVLLFESPA--ASGRY-LCTNG  256 (278)
Q Consensus       224 ~~~~~i~~~D~a~~~~~~~~~~~--~~~~~-~~~~~  256 (278)
                       ...+.+++|+|+++++++....  ..|.. .+.++
T Consensus       238 -~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG  272 (276)
T 3r1i_A          238 -LGRMGRPEELTGLYLYLASAASSYMTGSDIVIDGG  272 (276)
T ss_dssp             -TSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -CCCCcCHHHHHHHHHHHcCccccCccCcEEEECcC
Confidence             3557899999999999987543  34644 44443

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.95  E-value=3.7e-28  Score=196.64  Aligned_cols=219  Identities=16%  Similarity=0.152  Sum_probs=156.5

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      ++++|++|||||+|+||++++++|+++|+ +|+++.|+.+..+... .+...  .++.++.+|++|++++.++++     
T Consensus         3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (251)
T 1zk4_A            3 RLDGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGRHSDVGEKAAKSVGTP--DQIQFFQHDSSDEDGWTKLFDATEKA   79 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCT--TTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhcc--CceEEEECCCCCHHHHHHHHHHHHHH
Confidence            45678999999999999999999999999 8999988764332221 11111  278999999999999888876     


Q ss_pred             --CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHH----HHhcCC-CEEEEecceeeeecCCCCCCccccC
Q 023689           80 --GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEA----AKRFGV-RRVVVTSSISAIVPNPGWKGKVFDE  148 (278)
Q Consensus        80 --~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~----~~~~~~-~~~v~~Ss~~~~~~~~~~~~~~~~E  148 (278)
                        ++|+|||+||.....    ...+.++..+++|+.++.++.++    +++.+. ++||++||..++.+.+.        
T Consensus        80 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------  151 (251)
T 1zk4_A           80 FGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPS--------  151 (251)
T ss_dssp             HSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTT--------
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCCC--------
Confidence              489999999975432    22345678999999877765555    455566 79999999777654332        


Q ss_pred             CCCCchhhhhccCchhhhHHHHHHHHHHHHHH-----hcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccc
Q 023689          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAE-----KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (278)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~-----~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (278)
                                  ...|+.+|.+.+.+.+.++.     .++++++++|||.++|+.......  ...........      
T Consensus       152 ------------~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~--~~~~~~~~~~~------  211 (251)
T 1zk4_A          152 ------------LGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPG--AEEAMSQRTKT------  211 (251)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTT--HHHHHTSTTTC------
T ss_pred             ------------CccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcCc--hhhhHHHhhcC------
Confidence                        15799999999999888775     458999999999999986432210  11111011111      


Q ss_pred             cccCcccHHHHHHHHHhhhcCCC--CCce-EEecC
Q 023689          224 HWLGAVPVKDVAKAQVLLFESPA--ASGR-YLCTN  255 (278)
Q Consensus       224 ~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~  255 (278)
                      ....+++++|+|+++++++.+..  ..|. +.+.+
T Consensus       212 ~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g  246 (251)
T 1zk4_A          212 PMGHIGEPNDIAYICVYLASNESKFATGSEFVVDG  246 (251)
T ss_dssp             TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCCCcCHHHHHHHHHHHcCcccccccCcEEEECC
Confidence            13468899999999999987543  2454 44444

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.95  E-value=1.9e-28  Score=199.71  Aligned_cols=222  Identities=16%  Similarity=0.198  Sum_probs=162.6

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      .+++|++|||||+|+||++++++|.++|+ .|++..|+.+..+.+.. +.... .++.++++|++|+++++++++     
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~   85 (264)
T 3ucx_A            8 LLTDKVVVISGVGPALGTTLARRCAEQGA-DLVLAARTVERLEDVAKQVTDTG-RRALSVGTDITDDAQVAHLVDETMKA   85 (264)
T ss_dssp             TTTTCEEEEESCCTTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCcEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            46789999999999999999999999999 89888887654333221 11112 278999999999999988876     


Q ss_pred             --CccEEEEecccCCC-----CCCCCchhhhhhhHHhHHHHHHHHHHh----cCCCEEEEecceeeeecCCCCCCccccC
Q 023689           80 --GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (278)
Q Consensus        80 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~E  148 (278)
                        ++|++||+||....     +...++++..+++|+.++.++++++..    .+ +++|++||..+..+.+..       
T Consensus        86 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~-------  157 (264)
T 3ucx_A           86 YGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRHSQAKY-------  157 (264)
T ss_dssp             TSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGCCCTTC-------
T ss_pred             cCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhccCCCcc-------
Confidence              67999999987432     223356788999999999999887643    34 799999998876654432       


Q ss_pred             CCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCc--------hhHHHHHHHhhCC
Q 023689          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN--------ASCAVLQQLLQGS  217 (278)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~--------~~~~~~~~~~~~~  217 (278)
                                   ..|+.+|...+.+.+.++.+   +|+++++++||.|+++.......        ...........+.
T Consensus       158 -------------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (264)
T 3ucx_A          158 -------------GAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGS  224 (264)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTS
T ss_pred             -------------HHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccC
Confidence                         57999999999999888876   69999999999999885322100        0122223333333


Q ss_pred             CCcccccccCcccHHHHHHHHHhhhcCCC--CCce-EEecCc
Q 023689          218 KDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGR-YLCTNG  256 (278)
Q Consensus       218 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  256 (278)
                      |      ...+.+++|+|+++++++....  ..|. +.+.++
T Consensus       225 p------~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG  260 (264)
T 3ucx_A          225 D------LKRLPTEDEVASAILFMASDLASGITGQALDVNCG  260 (264)
T ss_dssp             S------SSSCCBHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             C------cccCCCHHHHHHHHHHHcCccccCCCCCEEEECCC
Confidence            3      4668899999999999986543  3464 444443

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.95  E-value=8e-28  Score=196.63  Aligned_cols=230  Identities=20%  Similarity=0.179  Sum_probs=161.6

Q ss_pred             CccccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc-
Q 023689            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-   79 (278)
Q Consensus         1 m~~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-   79 (278)
                      |..+..+++|++|||||+|+||++++++|+++|+ .|++..|+.+..+.+....   . ++.++++|++|+++++++++ 
T Consensus         1 M~~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~---~-~~~~~~~Dv~d~~~v~~~~~~   75 (270)
T 1yde_A            1 MATGTRYAGKVVVVTGGGRGIGAGIVRAFVNSGA-RVVICDKDESGGRALEQEL---P-GAVFILCDVTQEDDVKTLVSE   75 (270)
T ss_dssp             ---CCTTTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHC---T-TEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh---c-CCeEEEcCCCCHHHHHHHHHH
Confidence            6566677889999999999999999999999999 8988888765433322111   1 57899999999999888876 


Q ss_pred             ------CccEEEEecccCCC-----CCCCCchhhhhhhHHhHHHHHHHHHHhc---CCCEEEEecceeeeecCCCCCCcc
Q 023689           80 ------GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKV  145 (278)
Q Consensus        80 ------~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~v~~Ss~~~~~~~~~~~~~~  145 (278)
                            ++|++||+||....     +...++++..+++|+.++.++++++.+.   +.++||++||..+.++.+..    
T Consensus        76 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----  151 (270)
T 1yde_A           76 TIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQA----  151 (270)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTTC----
T ss_pred             HHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCCCCC----
Confidence                  68999999997542     1123457889999999999999888531   24799999998776654332    


Q ss_pred             ccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCC---CchhHHHHHHHhhCCCC
Q 023689          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPY---LNASCAVLQQLLQGSKD  219 (278)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~---~~~~~~~~~~~~~~~~~  219 (278)
                                      ..|+.+|...+.+.+.++.+   +|+++++++||.++|+.....   .......+.......| 
T Consensus       152 ----------------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p-  214 (270)
T 1yde_A          152 ----------------VPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQP-  214 (270)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTST-
T ss_pred             ----------------cccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCC-
Confidence                            57999999999999888865   599999999999999742110   0001111111112222 


Q ss_pred             cccccccCcccHHHHHHHHHhhhcCC-CCCce-EEecCc-cccHH
Q 023689          220 TQEYHWLGAVPVKDVAKAQVLLFESP-AASGR-YLCTNG-IYQFG  261 (278)
Q Consensus       220 ~~~~~~~~~i~~~D~a~~~~~~~~~~-~~~~~-~~~~~~-~~s~~  261 (278)
                           ...+.+++|+|+++++++... ...|. +.+.++ .+.+.
T Consensus       215 -----~~r~~~p~dva~~v~~L~s~~~~itG~~i~vdGG~~~~~~  254 (270)
T 1yde_A          215 -----LGRMGQPAEVGAAAVFLASEANFCTGIELLVTGGAELGYG  254 (270)
T ss_dssp             -----TSSCBCHHHHHHHHHHHHHHCTTCCSCEEEESTTTTSCC-
T ss_pred             -----CCCCcCHHHHHHHHHHHcccCCCcCCCEEEECCCeecccC
Confidence                 245689999999999998752 23464 444333 34433

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.95  E-value=1.1e-27  Score=200.33  Aligned_cols=233  Identities=20%  Similarity=0.140  Sum_probs=156.7

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCC--cccccCC---CCCCCceEEEEccCCChhhHHHHhc--
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS--SHLFALP---GAGDANLRVFEADVLDSGAVSRAVE--   79 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~--~~~~~~~---~~~~~~v~~~~~Dl~d~~~~~~~~~--   79 (278)
                      +++|++|||||+|+||++++++|+++|+ .|++..|+....  +.+..+.   .....++.++.+|++|++++.++++  
T Consensus         3 m~~k~vlVTGas~GIG~aia~~L~~~G~-~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~   81 (324)
T 3u9l_A            3 MSKKIILITGASSGFGRLTAEALAGAGH-RVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQI   81 (324)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Confidence            3468999999999999999999999999 899888864221  1111110   0011278999999999999998887  


Q ss_pred             -----CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccc
Q 023689           80 -----GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVF  146 (278)
Q Consensus        80 -----~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~  146 (278)
                           ++|+||||||.....    ...++++..+++|+.|+.++++++    ++++.+++|++||.++.......     
T Consensus        82 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~~~-----  156 (324)
T 3u9l_A           82 IGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPY-----  156 (324)
T ss_dssp             HHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCCSS-----
T ss_pred             HHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCCCc-----
Confidence                 789999999975432    233566888999999999999988    66677899999997775332110     


Q ss_pred             cCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCC---CchhHHHHHHHhhCCCCc
Q 023689          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPY---LNASCAVLQQLLQGSKDT  220 (278)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~---~~~~~~~~~~~~~~~~~~  220 (278)
                                    ...|+.||.+.+.+.+.++.+   +|+++++++||.+.++.....   ..................
T Consensus       157 --------------~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (324)
T 3u9l_A          157 --------------LAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNAG  222 (324)
T ss_dssp             --------------CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHTTTTT
T ss_pred             --------------chhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhccccccC
Confidence                          157999999999999988876   599999999999987653221   011111111211111111


Q ss_pred             ccc--------cccCcccHHHHHHHHHhhhcCCCCC-c-eEEecCcccc
Q 023689          221 QEY--------HWLGAVPVKDVAKAQVLLFESPAAS-G-RYLCTNGIYQ  259 (278)
Q Consensus       221 ~~~--------~~~~~i~~~D~a~~~~~~~~~~~~~-~-~~~~~~~~~s  259 (278)
                      .++        ...+..+++|+|++++.++..+... . ++.+++....
T Consensus       223 ~~~~~~~~~~~l~~~~~~p~~vA~aiv~~~~~~~~~~~~~~~~gp~~~~  271 (324)
T 3u9l_A          223 LGEEIKKAFAAIVPPDADVSLVADAIVRVVGTASGKRPFRVHVDPAEDG  271 (324)
T ss_dssp             HHHHHHHHHHHTSCTTCCTHHHHHHHHHHHTSCTTCCCSEEEECTTCCS
T ss_pred             CHHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCCCCeEEEeCCcchH
Confidence            111        1123368999999999999877432 2 4566654444

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.95  E-value=1.8e-27  Score=189.22  Aligned_cols=205  Identities=15%  Similarity=0.069  Sum_probs=156.2

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc---C
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---G   80 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---~   80 (278)
                      |+.+++|++|||||+|+||++++++|.++|+ .|++..|+.+                    +|++|+++++++++   +
T Consensus         1 M~~~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~--------------------~D~~~~~~v~~~~~~~g~   59 (223)
T 3uce_A            1 MMGSDKTVYVVLGGTSGIGAELAKQLESEHT-IVHVASRQTG--------------------LDISDEKSVYHYFETIGA   59 (223)
T ss_dssp             ----CCEEEEEETTTSHHHHHHHHHHCSTTE-EEEEESGGGT--------------------CCTTCHHHHHHHHHHHCS
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEecCCcc--------------------cCCCCHHHHHHHHHHhCC
Confidence            4456789999999999999999999999999 8888887642                    89999999998876   6


Q ss_pred             ccEEEEecccCCC-----CCCCCchhhhhhhHHhHHHHHHHHHHhcC--CCEEEEecceeeeecCCCCCCccccCCCCCc
Q 023689           81 CKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAKRFG--VRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (278)
Q Consensus        81 ~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~  153 (278)
                      +|++||+||....     +...++++..+++|+.++.++++++.+.-  .+++|++||..++.+.+..            
T Consensus        60 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~------------  127 (223)
T 3uce_A           60 FDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVVANT------------  127 (223)
T ss_dssp             EEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCCTTC------------
T ss_pred             CCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCCCCc------------
Confidence            8999999997522     22335678889999999999999997652  3589999998776554332            


Q ss_pred             hhhhhccCchhhhHHHHHHHHHHHHHHhcC-CceEEEecceeeCCCCCCCCch-hHHHHHHHhhCCCCcccccccCcccH
Q 023689          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEKHG-VDVVAIHPATCLGPLMQPYLNA-SCAVLQQLLQGSKDTQEYHWLGAVPV  231 (278)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~-~~~~~lrp~~i~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~  231 (278)
                              ..|+.+|...+.+.+.++.+.+ +++++++||.+.++........ ............|      ...+.++
T Consensus       128 --------~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~  193 (223)
T 3uce_A          128 --------YVKAAINAAIEATTKVLAKELAPIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLP------VGKVGEA  193 (223)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHHHHTTSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHST------TCSCBCH
T ss_pred             --------hHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCC------CCCccCH
Confidence                    5799999999999999998765 9999999999999865443221 1222333333333      3567899


Q ss_pred             HHHHHHHHhhhcCCCCCceE-EecC
Q 023689          232 KDVAKAQVLLFESPAASGRY-LCTN  255 (278)
Q Consensus       232 ~D~a~~~~~~~~~~~~~~~~-~~~~  255 (278)
                      +|+|+++++++.+....|.. .+.+
T Consensus       194 ~dvA~~~~~l~~~~~~tG~~i~vdg  218 (223)
T 3uce_A          194 SDIAMAYLFAIQNSYMTGTVIDVDG  218 (223)
T ss_dssp             HHHHHHHHHHHHCTTCCSCEEEEST
T ss_pred             HHHHHHHHHHccCCCCCCcEEEecC
Confidence            99999999999876666754 4443

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.95  E-value=5.2e-28  Score=195.20  Aligned_cols=218  Identities=17%  Similarity=0.151  Sum_probs=155.8

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEec-CCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVF-PGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r-~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      +++|++|||||+|+||++++++|+++|+ .|++..| +.+..+... .+.... .++.++++|++|++++.++++     
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGA-NVVVNYAGNEQKANEVVDEIKKLG-SDAIAVRADVANAEDVTNMVKQTVDV   79 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3568999999999999999999999999 8888887 443222211 111111 178899999999999988876     


Q ss_pred             --CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccCC
Q 023689           80 --GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (278)
Q Consensus        80 --~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~  149 (278)
                        ++|++||+||.....    ...++++..+++|+.++.++++++    ++++.++||++||..+.++.+..        
T Consensus        80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------  151 (246)
T 2uvd_A           80 FGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQ--------  151 (246)
T ss_dssp             HSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTB--------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCCCC--------
Confidence              689999999975431    233467889999999976666554    45567899999998776654332        


Q ss_pred             CCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccccc
Q 023689          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (278)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (278)
                                  ..|+.+|...+.+.+.++.+   +|+++++++||.+.++.......   ..........|      ..
T Consensus       152 ------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---~~~~~~~~~~p------~~  210 (246)
T 2uvd_A          152 ------------ANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLDE---NIKAEMLKLIP------AA  210 (246)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCCT---THHHHHHHTCT------TC
T ss_pred             ------------chHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcCH---HHHHHHHhcCC------CC
Confidence                        46999999988888777754   58999999999999886443211   11122222222      24


Q ss_pred             CcccHHHHHHHHHhhhcCCC--CCce-EEecC
Q 023689          227 GAVPVKDVAKAQVLLFESPA--ASGR-YLCTN  255 (278)
Q Consensus       227 ~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~  255 (278)
                      .+++++|+|+++++++....  ..|. +.+.+
T Consensus       211 ~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdg  242 (246)
T 2uvd_A          211 QFGEAQDIANAVTFFASDQSKYITGQTLNVDG  242 (246)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCcCHHHHHHHHHHHcCchhcCCCCCEEEECc
Confidence            58899999999999986533  3464 44443

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.95  E-value=3.3e-28  Score=193.45  Aligned_cols=229  Identities=20%  Similarity=0.113  Sum_probs=160.6

Q ss_pred             CccccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc-
Q 023689            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-   79 (278)
Q Consensus         1 m~~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-   79 (278)
                      |....++++|++|||||+++||+++++.|.++|+ .|++..|+..+ +....+...+. ++..+++|++|+++++++++ 
T Consensus         1 M~n~f~L~GKvalVTGas~GIG~aiA~~la~~Ga-~Vvi~~r~~~~-~~~~~~~~~g~-~~~~~~~Dv~d~~~v~~~~~~   77 (247)
T 4hp8_A            1 MKNPFSLEGRKALVTGANTGLGQAIAVGLAAAGA-EVVCAARRAPD-ETLDIIAKDGG-NASALLIDFADPLAAKDSFTD   77 (247)
T ss_dssp             --CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCCH-HHHHHHHHTTC-CEEEEECCTTSTTTTTTSSTT
T ss_pred             CcCCcCCCCCEEEEeCcCCHHHHHHHHHHHHcCC-EEEEEeCCcHH-HHHHHHHHhCC-cEEEEEccCCCHHHHHHHHHh
Confidence            4333468899999999999999999999999999 88888886532 11222211222 78999999999998888776 


Q ss_pred             -CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHH----HhcC-CCEEEEecceeeeecCCCCCCccccCC
Q 023689           80 -GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFG-VRRVVVTSSISAIVPNPGWKGKVFDET  149 (278)
Q Consensus        80 -~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~E~  149 (278)
                       ++|++|||||....    +...++|+..+++|+.|+..+.+++    .+++ -+++|++||..+..+.++.        
T Consensus        78 g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~--------  149 (247)
T 4hp8_A           78 AGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRV--------  149 (247)
T ss_dssp             TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSC--------
T ss_pred             CCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCC--------
Confidence             58999999997554    3344678999999999988887765    3343 5799999998887665543        


Q ss_pred             CCCchhhhhccCchhhhHHHHHHHHHHHHHH---hcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccccc
Q 023689          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (278)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (278)
                          +        .|+.||.....+.+.++.   ++||++++|.||.|.++...... ........+....|      ..
T Consensus       150 ----~--------~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~-~~~~~~~~~~~~~P------lg  210 (247)
T 4hp8_A          150 ----P--------SYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALR-ADAARNKAILERIP------AG  210 (247)
T ss_dssp             ----H--------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHH-TSHHHHHHHHTTCT------TS
T ss_pred             ----h--------HHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcc-cCHHHHHHHHhCCC------CC
Confidence                3        455555555555555543   56999999999999988643210 11222333344433      34


Q ss_pred             CcccHHHHHHHHHhhhcCCC--CCceEEecCcccc
Q 023689          227 GAVPVKDVAKAQVLLFESPA--ASGRYLCTNGIYQ  259 (278)
Q Consensus       227 ~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~~~~s  259 (278)
                      .+..++|+|.+++++.....  -.|+.+..++.++
T Consensus       211 R~g~peeiA~~v~fLaSd~a~~iTG~~i~VDGG~~  245 (247)
T 4hp8_A          211 RWGHSEDIAGAAVFLSSAAADYVHGAILNVDGGWL  245 (247)
T ss_dssp             SCBCTHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             CCcCHHHHHHHHHHHhCchhcCCcCCeEEECcccc
Confidence            57789999999999886543  3576665555554

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.95  E-value=5.6e-28  Score=195.58  Aligned_cols=210  Identities=16%  Similarity=0.157  Sum_probs=147.5

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      .+++|++|||||+|+||++++++|.++|+ .|++..|+.+..+.+.. +...+ .++.++.+|++|++++.++++     
T Consensus         4 ~~~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (252)
T 3h7a_A            4 TPRNATVAVIGAGDYIGAEIAKKFAAEGF-TVFAGRRNGEKLAPLVAEIEAAG-GRIVARSLDARNEDEVTAFLNAADAH   81 (252)
T ss_dssp             -CCSCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTT-CEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CeEEEEECcCCCHHHHHHHHHHHHhh
Confidence            46789999999999999999999999999 89999997765443322 11112 278999999999999998886     


Q ss_pred             -CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccCCC
Q 023689           80 -GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (278)
Q Consensus        80 -~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~  150 (278)
                       ++|++||+||....    +...++++..+++|+.++.++++++    ++++.++||++||..+..+.++.         
T Consensus        82 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  152 (252)
T 3h7a_A           82 APLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSGF---------  152 (252)
T ss_dssp             SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCTTC---------
T ss_pred             CCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCCCC---------
Confidence             67999999997554    2234567889999999998888876    44566799999998876654432         


Q ss_pred             CCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCce-EEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccccc
Q 023689          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDV-VAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (278)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~-~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (278)
                                 ..|+.||.+.+.+.+.++.+   .|+++ ++++||.+.++.......   ..........      ...
T Consensus       153 -----------~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~---~~~~~~~~~~------~~~  212 (252)
T 3h7a_A          153 -----------AAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERRE---QMFGKDALAN------PDL  212 (252)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-----------------------------------
T ss_pred             -----------ccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccch---hhhhhhhhcC------Ccc
Confidence                       57999999999998888865   48999 899999999886443211   1111111111      123


Q ss_pred             CcccHHHHHHHHHhhhcCCCC
Q 023689          227 GAVPVKDVAKAQVLLFESPAA  247 (278)
Q Consensus       227 ~~i~~~D~a~~~~~~~~~~~~  247 (278)
                       +++++|+|+++++++.++..
T Consensus       213 -~~~pedvA~~~~~l~s~~~~  232 (252)
T 3h7a_A          213 -LMPPAAVAGAYWQLYQQPKS  232 (252)
T ss_dssp             --CCHHHHHHHHHHHHHCCGG
T ss_pred             -CCCHHHHHHHHHHHHhCchh
Confidence             88999999999999986554

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.95  E-value=1.2e-27  Score=195.35  Aligned_cols=221  Identities=19%  Similarity=0.178  Sum_probs=160.5

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEe-cCCCCCccc-ccCCCCCCCceEEEEccCCChhhHHHHhc--
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATV-FPGSDSSHL-FALPGAGDANLRVFEADVLDSGAVSRAVE--   79 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~-r~~~~~~~~-~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--   79 (278)
                      |+++.+|++|||||+|+||++++++|+++|+ .|++.. |+.+..... ..+.... .++.++.+|++|++++.++++  
T Consensus        21 ~~~l~~k~vlVTGas~gIG~~la~~l~~~G~-~v~i~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dl~~~~~~~~~~~~~   98 (267)
T 4iiu_A           21 QSNAMSRSVLVTGASKGIGRAIARQLAADGF-NIGVHYHRDAAGAQETLNAIVANG-GNGRLLSFDVANREQCREVLEHE   98 (267)
T ss_dssp             ----CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcC-CceEEEEecCCCHHHHHHHHHHH
Confidence            3456678999999999999999999999999 775554 433222211 1111111 278999999999999888876  


Q ss_pred             -----CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHH-----hcCCCEEEEecceeeeecCCCCCCcc
Q 023689           80 -----GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK-----RFGVRRVVVTSSISAIVPNPGWKGKV  145 (278)
Q Consensus        80 -----~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~-----~~~~~~~v~~Ss~~~~~~~~~~~~~~  145 (278)
                           ++|+|||+||.....    ...++++..+++|+.++.++++++.     +.+.++||++||..++.+.+..    
T Consensus        99 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----  174 (267)
T 4iiu_A           99 IAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQ----  174 (267)
T ss_dssp             HHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCTTC----
T ss_pred             HHHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCCCC----
Confidence                 689999999976542    2345678899999999999998873     4556899999998887665432    


Q ss_pred             ccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccc
Q 023689          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQE  222 (278)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (278)
                                      ..|+.+|.+.+.+.+.++.+.   |+++++++||.+.++.....    ...........+    
T Consensus       175 ----------------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~p----  230 (267)
T 4iiu_A          175 ----------------VNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME----ESALKEAMSMIP----  230 (267)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC----HHHHHHHHHTCT----
T ss_pred             ----------------chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc----HHHHHHHHhcCC----
Confidence                            579999998888888777654   89999999999999875443    233344444433    


Q ss_pred             ccccCcccHHHHHHHHHhhhcCCC--CCce-EEecCc
Q 023689          223 YHWLGAVPVKDVAKAQVLLFESPA--ASGR-YLCTNG  256 (278)
Q Consensus       223 ~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  256 (278)
                        ...+.+++|+|+++++++....  ..|. +.+.++
T Consensus       231 --~~~~~~~edva~~~~~L~s~~~~~itG~~i~vdGG  265 (267)
T 4iiu_A          231 --MKRMGQAEEVAGLASYLMSDIAGYVTRQVISINGG  265 (267)
T ss_dssp             --TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             --CCCCcCHHHHHHHHHHHhCCcccCccCCEEEeCCC
Confidence              3567899999999999987543  3464 444443

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.95  E-value=6.1e-28  Score=198.39  Aligned_cols=222  Identities=15%  Similarity=0.123  Sum_probs=158.6

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcC-----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG-----   80 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~-----   80 (278)
                      ++++|++|||||+|+||++++++|+++|+ .|+++.|+.+..+.+.........++.++.+|++|++++.++++.     
T Consensus        31 ~l~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~  109 (279)
T 3ctm_A           31 SLKGKVASVTGSSGGIGWAVAEAYAQAGA-DVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDF  109 (279)
T ss_dssp             CCTTCEEEETTTTSSHHHHHHHHHHHHTC-EEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHh
Confidence            46678999999999999999999999999 899998876553332211000011788999999999998888764     


Q ss_pred             --ccEEEEecccCCC-C-----CCCCchhhhhhhHHhH----HHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccC
Q 023689           81 --CKGVFHVASPCTL-E-----DPVDPEKELILPAVQG----TLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (278)
Q Consensus        81 --~d~vi~~a~~~~~-~-----~~~~~~~~~~~~n~~~----~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E  148 (278)
                        +|+|||+||.... .     ...+.++..+++|+.+    ++++++.+++++.++||++||..+..+...        
T Consensus       110 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------  181 (279)
T 3ctm_A          110 GTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIP--------  181 (279)
T ss_dssp             SCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC-----------
T ss_pred             CCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCCC--------
Confidence              8999999997544 1     1223567789999999    567777777777889999999766433100        


Q ss_pred             CCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccc
Q 023689          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (278)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (278)
                                .....|+.+|.+.+.+.+.++.+.   + ++++++||.+.++......   ...........+      .
T Consensus       182 ----------~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~~---~~~~~~~~~~~p------~  241 (279)
T 3ctm_A          182 ----------QLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFAS---KDMKAKWWQLTP------L  241 (279)
T ss_dssp             ----------CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSCC---HHHHHHHHHHST------T
T ss_pred             ----------CCcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccccC---hHHHHHHHHhCC------c
Confidence                      011579999999999999998764   6 9999999999998653221   122222222222      3


Q ss_pred             cCcccHHHHHHHHHhhhcCCC--CCce-EEecCc
Q 023689          226 LGAVPVKDVAKAQVLLFESPA--ASGR-YLCTNG  256 (278)
Q Consensus       226 ~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  256 (278)
                      ..+++++|+|+++++++....  ..|. +.+.++
T Consensus       242 ~~~~~~~dvA~~~~~l~s~~~~~~tG~~i~vdgG  275 (279)
T 3ctm_A          242 GREGLTQELVGGYLYLASNASTFTTGSDVVIDGG  275 (279)
T ss_dssp             CSCBCGGGTHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCCcCHHHHHHHHHHHhCccccCccCCEEEECCC
Confidence            457899999999999987543  3454 444443

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.95  E-value=1.9e-28  Score=203.35  Aligned_cols=219  Identities=18%  Similarity=0.136  Sum_probs=155.3

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc---
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE---   79 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---   79 (278)
                      |..+++|++|||||+|+||++++++|+++|+ .|++..|+.+..+... .+.... .++.++.+|++|.+++.++++   
T Consensus        26 m~~l~gk~vlVTGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~  103 (301)
T 3tjr_A           26 LSGFDGRAAVVTGGASGIGLATATEFARRGA-RLVLSDVDQPALEQAVNGLRGQG-FDAHGVVCDVRHLDEMVRLADEAF  103 (301)
T ss_dssp             CCCSTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             HhccCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcC-CceEEEEccCCCHHHHHHHHHHHH
Confidence            4457889999999999999999999999999 8999988765433322 111112 278999999999999988876   


Q ss_pred             ----CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHHH----hcC-CCEEEEecceeeeecCCCCCCccc
Q 023689           80 ----GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAK----RFG-VRRVVVTSSISAIVPNPGWKGKVF  146 (278)
Q Consensus        80 ----~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~-~~~~v~~Ss~~~~~~~~~~~~~~~  146 (278)
                          ++|+|||+||....    +...++++..+++|+.|+.++++++.    +++ .++||++||..++.+.+..     
T Consensus       104 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----  178 (301)
T 3tjr_A          104 RLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGL-----  178 (301)
T ss_dssp             HHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTB-----
T ss_pred             HhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCc-----
Confidence                68999999997643    22345678899999999999998873    334 5789999998887654432     


Q ss_pred             cCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCc-c-
Q 023689          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT-Q-  221 (278)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~-~-  221 (278)
                                     ..|+.||.+.+.+.+.++.+.   |+++++++||.|.++..........  ........+.. . 
T Consensus       179 ---------------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~--~~~~~~~~~~~~~~  241 (301)
T 3tjr_A          179 ---------------GTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRG--ADYGMSATPEGAFG  241 (301)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC-----------------
T ss_pred             ---------------hHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccccccccc--hhhccccChhhhcc
Confidence                           579999999998888887654   8999999999998875321100000  00000000000 0 


Q ss_pred             -cccccCcccHHHHHHHHHhhhcCCC
Q 023689          222 -EYHWLGAVPVKDVAKAQVLLFESPA  246 (278)
Q Consensus       222 -~~~~~~~i~~~D~a~~~~~~~~~~~  246 (278)
                       ......+++++|+|++++.+++++.
T Consensus       242 ~~~~~~~~~~pedvA~~i~~~l~~~~  267 (301)
T 3tjr_A          242 PLPTQDESVSADDVARLTADAILANR  267 (301)
T ss_dssp             -------CCCHHHHHHHHHHHHHHTC
T ss_pred             ccccccCCCCHHHHHHHHHHHHhcCC
Confidence             1134568999999999999998653

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.95  E-value=3.9e-28  Score=199.64  Aligned_cols=225  Identities=14%  Similarity=0.135  Sum_probs=159.0

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCC--CCceEEEEccCCChhhHHHHhc-
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAG--DANLRVFEADVLDSGAVSRAVE-   79 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~--~~~v~~~~~Dl~d~~~~~~~~~-   79 (278)
                      |..+++|++|||||+|+||++++++|+++|+ .|++..|+.+..+... .+....  ..++.++.+|++|+++++++++ 
T Consensus         1 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   79 (280)
T 1xkq_A            1 MPRFSNKTVIITGSSNGIGRTTAILFAQEGA-NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINS   79 (280)
T ss_dssp             -CTTTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHH
Confidence            3456789999999999999999999999999 8988888764433221 111111  1168899999999999888876 


Q ss_pred             ------CccEEEEecccCCCC--------CCCCchhhhhhhHHhHHHHHHHHHHh----cCCCEEEEecceeeeecC-CC
Q 023689           80 ------GCKGVFHVASPCTLE--------DPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPN-PG  140 (278)
Q Consensus        80 ------~~d~vi~~a~~~~~~--------~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~v~~Ss~~~~~~~-~~  140 (278)
                            ++|+|||+||.....        ...+.++..+++|+.++.++++++..    .+ ++||++||..+..+. +.
T Consensus        80 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~  158 (280)
T 1xkq_A           80 TLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPD  158 (280)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCCCS
T ss_pred             HHHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCCCCc
Confidence                  689999999975432        12345788999999999999888754    34 799999997765443 22


Q ss_pred             CCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCC--ch----hHHHHH
Q 023689          141 WKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYL--NA----SCAVLQ  211 (278)
Q Consensus       141 ~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~--~~----~~~~~~  211 (278)
                                          ...|+.+|.+.+.+.+.++.+   +|+++++++||.+.++......  ..    ......
T Consensus       159 --------------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~  218 (280)
T 1xkq_A          159 --------------------FLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMA  218 (280)
T ss_dssp             --------------------SHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHH
T ss_pred             --------------------ccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHH
Confidence                                157999999999998888754   5999999999999998532210  00    011111


Q ss_pred             HHhhCCCCcccccccCcccHHHHHHHHHhhhcCC---CCCce-EEecCc
Q 023689          212 QLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP---AASGR-YLCTNG  256 (278)
Q Consensus       212 ~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~---~~~~~-~~~~~~  256 (278)
                      ......|      ...+.+++|+|+++++++...   ...|. +.+.++
T Consensus       219 ~~~~~~p------~~~~~~pedvA~~v~~l~s~~~~~~~tG~~i~vdgG  261 (280)
T 1xkq_A          219 SHKECIP------IGAAGKPEHIANIILFLADRNLSFYILGQSIVADGG  261 (280)
T ss_dssp             HCTTTCT------TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTT
T ss_pred             HHHcCCC------CCCCCCHHHHHHHHHHhcCcccccCccCCeEEECCC
Confidence            2111111      346889999999999998654   23464 444433

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.95  E-value=4e-28  Score=202.09  Aligned_cols=221  Identities=14%  Similarity=0.116  Sum_probs=156.9

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCC-------CcccccCCCCCCCceEEEEccCCChhhHHHHhcCc
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-------SSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGC   81 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~-------~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~   81 (278)
                      ||+||||||||+||++++++|+++|+ .|++++|+...       ...+..+.   ..+++++++|++|++++.++++++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~l~---~~~v~~v~~D~~d~~~l~~~~~~~   77 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGN-PTYALVRKTITAANPETKEELIDNYQ---SLGVILLEGDINDHETLVKAIKQV   77 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTC-CEEEEECCSCCSSCHHHHHHHHHHHH---HTTCEEEECCTTCHHHHHHHHTTC
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCC-cEEEEECCCcccCChHHHHHHHHHHH---hCCCEEEEeCCCCHHHHHHHHhCC
Confidence            67999999999999999999999998 89999997611       11111110   017899999999999999999999


Q ss_pred             cEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcC-CCEEEEecceeeeecCCCCCCccccCCCCCchhhhhcc
Q 023689           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSR  160 (278)
Q Consensus        82 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  160 (278)
                      |+|||+|+...               +.++.+++++|++.+ +++||+ |+ .+   ..      .+|..+..|.     
T Consensus        78 d~vi~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S~-~g---~~------~~~~~~~~p~-----  126 (307)
T 2gas_A           78 DIVICAAGRLL---------------IEDQVKIIKAIKEAGNVKKFFP-SE-FG---LD------VDRHDAVEPV-----  126 (307)
T ss_dssp             SEEEECSSSSC---------------GGGHHHHHHHHHHHCCCSEEEC-SC-CS---SC------TTSCCCCTTH-----
T ss_pred             CEEEECCcccc---------------cccHHHHHHHHHhcCCceEEee-cc-cc---cC------cccccCCCcc-----
Confidence            99999998632               456789999999998 999984 43 21   11      1222222221     


Q ss_pred             CchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCc-c--cccccCcccHHHHHHH
Q 023689          161 KKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT-Q--EYHWLGAVPVKDVAKA  237 (278)
Q Consensus       161 ~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~i~~~D~a~~  237 (278)
                      ...| .+|...|.+++    +.+++++++||+.++++.........    .....+.... .  ++..+++++++|+|++
T Consensus       127 ~~~y-~sK~~~e~~~~----~~~i~~~~lrp~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  197 (307)
T 2gas_A          127 RQVF-EEKASIRRVIE----AEGVPYTYLCCHAFTGYFLRNLAQLD----ATDPPRDKVVILGDGNVKGAYVTEADVGTF  197 (307)
T ss_dssp             HHHH-HHHHHHHHHHH----HHTCCBEEEECCEETTTTGGGTTCTT----CSSCCSSEEEEETTSCSEEEEECHHHHHHH
T ss_pred             hhHH-HHHHHHHHHHH----HcCCCeEEEEcceeeccccccccccc----cccCCCCeEEEecCCCcceEEeeHHHHHHH
Confidence            1468 99999998875    56899999999999886432211000    0000111111 1  3467899999999999


Q ss_pred             HHhhhcCCCCCc-eE-Eec-CccccHHHHHHHHHHhCCC
Q 023689          238 QVLLFESPAASG-RY-LCT-NGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       238 ~~~~~~~~~~~~-~~-~~~-~~~~s~~e~~~~i~~~~~~  273 (278)
                      ++.++.++...+ .+ +.+ ++.+|+.|+++.+.+.+++
T Consensus       198 ~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~  236 (307)
T 2gas_A          198 TIRAANDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIGK  236 (307)
T ss_dssp             HHHHHTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTS
T ss_pred             HHHHHcCccccCceEEEeCCCCcCCHHHHHHHHHHHhCC
Confidence            999998765434 44 444 4689999999999998853

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.95  E-value=5e-28  Score=196.91  Aligned_cols=223  Identities=15%  Similarity=0.089  Sum_probs=155.7

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCC-CCCceEEEEccCCChhhHHHHhc----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGA-GDANLRVFEADVLDSGAVSRAVE----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~-~~~~v~~~~~Dl~d~~~~~~~~~----   79 (278)
                      .+++|++|||||+|+||++++++|+++|+ .|++..|+.+..+... .+... ...++.++.+|++|++++.++++    
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (260)
T 2z1n_A            4 GIQGKLAVVTAGSSGLGFASALELARNGA-RLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARD   82 (260)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            36678999999999999999999999999 8988888764332221 11100 01168899999999999998886    


Q ss_pred             --CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccCC
Q 023689           80 --GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (278)
Q Consensus        80 --~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~  149 (278)
                        ++|+|||+||....    +...++++..+++|+.++.++.+++    ++++.++||++||..++.+.+..        
T Consensus        83 ~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------  154 (260)
T 2z1n_A           83 LGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDL--------  154 (260)
T ss_dssp             TTCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTB--------
T ss_pred             hcCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCC--------
Confidence              58999999996543    1233467889999999996666655    45677899999998776543321        


Q ss_pred             CCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCC-------chhHHH-HHHHhhCCC
Q 023689          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYL-------NASCAV-LQQLLQGSK  218 (278)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~-------~~~~~~-~~~~~~~~~  218 (278)
                                  ..|+.+|...+.+.+.++.+.   |+++++++||.++++......       ...... ........ 
T Consensus       155 ------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  221 (260)
T 2z1n_A          155 ------------ALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRI-  221 (260)
T ss_dssp             ------------HHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------CC-
T ss_pred             ------------chhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcC-
Confidence                        479999999998888887654   899999999999998754210       000000 11111111 


Q ss_pred             CcccccccCcccHHHHHHHHHhhhcCCC--CCceE-EecC
Q 023689          219 DTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRY-LCTN  255 (278)
Q Consensus       219 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~-~~~~  255 (278)
                           ....+.+++|+|+++++++....  ..|.. .+.+
T Consensus       222 -----p~~r~~~~~dva~~v~~l~s~~~~~~tG~~i~vdG  256 (260)
T 2z1n_A          222 -----PMGRVGKPEELASVVAFLASEKASFITGAVIPVDG  256 (260)
T ss_dssp             -----TTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             -----CCCCccCHHHHHHHHHHHhCccccCCCCCEEEeCC
Confidence                 13457899999999999987532  34644 4433

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.95  E-value=2.7e-27  Score=191.89  Aligned_cols=215  Identities=17%  Similarity=0.118  Sum_probs=155.8

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc-------
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------   79 (278)
                      +++|++|||||+|+||++++++|+++|+ .|++..|+.+..+......  . .++.++.+|++|++++.++++       
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~--~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (254)
T 1hdc_A            3 LSGKTVIITGGARGLGAEAARQAVAAGA-RVVLADVLDEEGAATAREL--G-DAARYQHLDVTIEEDWQRVVAYAREEFG   78 (254)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTT--G-GGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh--C-CceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4678999999999999999999999999 8988888764433322111  1 168899999999999988876       


Q ss_pred             CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHH----HHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCC
Q 023689           80 GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLN----VLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (278)
Q Consensus        80 ~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~----ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~  151 (278)
                      ++|++||+||....    +...++++..+++|+.++..    +++.+++++.++||++||..++.+.+..          
T Consensus        79 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----------  148 (254)
T 1hdc_A           79 SVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALT----------  148 (254)
T ss_dssp             CCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTC----------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCc----------
Confidence            78999999997543    12334678899999998874    5555566677899999998776543321          


Q ss_pred             CchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCC-CCccc-cccc
Q 023689          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGS-KDTQE-YHWL  226 (278)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~  226 (278)
                                ..|+.+|...+.+.+.++.+   +|+++++++||.++++....           ..... ..... ....
T Consensus       149 ----------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-----------~~~~~~~~~~~~~p~~  207 (254)
T 1hdc_A          149 ----------SSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAE-----------TGIRQGEGNYPNTPMG  207 (254)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH-----------HTCCCSTTSCTTSTTS
T ss_pred             ----------hhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccccc-----------cchhHHHHHHhcCCCC
Confidence                      57999999999999888865   48999999999999874211           00000 00000 1123


Q ss_pred             Ccc-cHHHHHHHHHhhhcCCC--CCceE-EecCc
Q 023689          227 GAV-PVKDVAKAQVLLFESPA--ASGRY-LCTNG  256 (278)
Q Consensus       227 ~~i-~~~D~a~~~~~~~~~~~--~~~~~-~~~~~  256 (278)
                      .+. +++|+|+++++++....  ..|.+ .+.++
T Consensus       208 ~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG  241 (254)
T 1hdc_A          208 RVGNEPGEIAGAVVKLLSDTSSYVTGAELAVDGG  241 (254)
T ss_dssp             SCB-CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCCCHHHHHHHHHHHhCchhcCCCCCEEEECCC
Confidence            467 99999999999987543  34654 44433

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.95  E-value=7.2e-28  Score=197.23  Aligned_cols=219  Identities=17%  Similarity=0.182  Sum_probs=150.9

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEE-ecCCCCCccccc-CCCCCCCceEEEEccCCChhhHHHHhc------
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINAT-VFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE------   79 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~-~r~~~~~~~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~------   79 (278)
                      ++|++|||||+|+||++++++|+++|+ .|++. .|+.+..+.+.. +.... .++.++.+|++|++++.++++      
T Consensus        25 ~~k~vlITGas~gIG~a~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~  102 (272)
T 4e3z_A           25 DTPVVLVTGGSRGIGAAVCRLAARQGW-RVGVNYAANREAADAVVAAITESG-GEAVAIPGDVGNAADIAAMFSAVDRQF  102 (272)
T ss_dssp             CSCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTT-CEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCChhHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            367999999999999999999999999 77665 554433322211 11111 278999999999999888876      


Q ss_pred             -CccEEEEecccCCCC-----CCCCchhhhhhhHHhHHHHHHHHHHhc-------CCCEEEEecceeeeecCCCCCCccc
Q 023689           80 -GCKGVFHVASPCTLE-----DPVDPEKELILPAVQGTLNVLEAAKRF-------GVRRVVVTSSISAIVPNPGWKGKVF  146 (278)
Q Consensus        80 -~~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~ll~~~~~~-------~~~~~v~~Ss~~~~~~~~~~~~~~~  146 (278)
                       ++|+|||+||.....     ...+.++..+++|+.++.++++++.+.       +.++||++||.+++.+.+..     
T Consensus       103 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----  177 (272)
T 4e3z_A          103 GRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQ-----  177 (272)
T ss_dssp             SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTTT-----
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCCC-----
Confidence             679999999975531     134567889999999999998887443       35689999998877654321     


Q ss_pred             cCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccc
Q 023689          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (278)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (278)
                                    ...|+.+|.+.+.+.+.++.+.   |+++++++||.|.++.....  .............+     
T Consensus       178 --------------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~-----  236 (272)
T 4e3z_A          178 --------------YVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASG--GLPDRAREMAPSVP-----  236 (272)
T ss_dssp             --------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC--------------------CCT-----
T ss_pred             --------------cchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCccccc--CChHHHHHHhhcCC-----
Confidence                          1469999999999998888764   89999999999999864431  11112222222222     


Q ss_pred             cccCcccHHHHHHHHHhhhcCCC--CCce-EEecC
Q 023689          224 HWLGAVPVKDVAKAQVLLFESPA--ASGR-YLCTN  255 (278)
Q Consensus       224 ~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~  255 (278)
                       ...+.+++|+|+++++++....  ..|. +++.+
T Consensus       237 -~~~~~~~edvA~~i~~l~s~~~~~~tG~~i~vdg  270 (272)
T 4e3z_A          237 -MQRAGMPEEVADAILYLLSPSASYVTGSILNVSG  270 (272)
T ss_dssp             -TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             -cCCCcCHHHHHHHHHHHhCCccccccCCEEeecC
Confidence             3456789999999999986543  2453 45544

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.95  E-value=1.6e-27  Score=194.78  Aligned_cols=214  Identities=18%  Similarity=0.171  Sum_probs=157.3

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCC-CCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS-DSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~-~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~----   79 (278)
                      .+++|++|||||+|+||++++++|+++|+ .|++..++.. ..+.+. .+...+ .++.++.+|++|+++++++++    
T Consensus        28 ~l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~  105 (271)
T 3v2g_A           28 SLAGKTAFVTGGSRGIGAAIAKRLALEGA-AVALTYVNAAERAQAVVSEIEQAG-GRAVAIRADNRDAEAIEQAIRETVE  105 (271)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHHHHHHHHH
Confidence            46789999999999999999999999999 7877755442 222211 111112 278899999999999988876    


Q ss_pred             ---CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHhc--CCCEEEEecceeeeec-CCCCCCccccCC
Q 023689           80 ---GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVP-NPGWKGKVFDET  149 (278)
Q Consensus        80 ---~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~Ss~~~~~~-~~~~~~~~~~E~  149 (278)
                         ++|++||+||.....    ...++++..+++|+.++.++++++.+.  ..+++|++||..+... .+.         
T Consensus       106 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~~~~~---------  176 (271)
T 3v2g_A          106 ALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVPWPG---------  176 (271)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCCCSTT---------
T ss_pred             HcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccCCCCC---------
Confidence               789999999975542    234567889999999999999998765  3578999998655432 121         


Q ss_pred             CCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccccc
Q 023689          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (278)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (278)
                                 ...|+.+|.+.+.+.+.++.+.   |+++++++||.|.++.........    .......+      ..
T Consensus       177 -----------~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~----~~~~~~~~------~~  235 (271)
T 3v2g_A          177 -----------ISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGDHA----EAQRERIA------TG  235 (271)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCSSH----HHHHHTCT------TS
T ss_pred             -----------chHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccchhH----HHHHhcCC------CC
Confidence                       2579999999999988888764   899999999999998754432221    12222222      34


Q ss_pred             CcccHHHHHHHHHhhhcCCC--CCceE
Q 023689          227 GAVPVKDVAKAQVLLFESPA--ASGRY  251 (278)
Q Consensus       227 ~~i~~~D~a~~~~~~~~~~~--~~~~~  251 (278)
                      .+.+++|+|+++++++....  ..|..
T Consensus       236 r~~~pedvA~~v~fL~s~~~~~itG~~  262 (271)
T 3v2g_A          236 SYGEPQDIAGLVAWLAGPQGKFVTGAS  262 (271)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             CCCCHHHHHHHHHHHhCcccCCccCCE
Confidence            57899999999999986433  34654

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.95  E-value=6.9e-28  Score=196.19  Aligned_cols=221  Identities=17%  Similarity=0.175  Sum_probs=151.4

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc----
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~----   79 (278)
                      ++.+++|++|||||+|+||++++++|+++|+ .|++..|+.+..+.+....  . .++.++.+|++|.++++++++    
T Consensus         4 ~m~l~~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~--~-~~~~~~~~D~~~~~~~~~~~~~~~~   79 (261)
T 3n74_A            4 SMSLEGKVALITGAGSGFGEGMAKRFAKGGA-KVVIVDRDKAGAERVAGEI--G-DAALAVAADISKEADVDAAVEAALS   79 (261)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH--C-TTEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHh--C-CceEEEEecCCCHHHHHHHHHHHHH
Confidence            3467789999999999999999999999999 8999998765543332211  1 178999999999999888876    


Q ss_pred             ---CccEEEEecccCCCC-----CCCCchhhhhhhHHhHHHHHHHHHHhc----C----CCEEEEecceeeeecCCCCCC
Q 023689           80 ---GCKGVFHVASPCTLE-----DPVDPEKELILPAVQGTLNVLEAAKRF----G----VRRVVVTSSISAIVPNPGWKG  143 (278)
Q Consensus        80 ---~~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~ll~~~~~~----~----~~~~v~~Ss~~~~~~~~~~~~  143 (278)
                         ++|++||+||.....     ...++++..+++|+.++.++++++...    +    ..++|++||..++.+.+..  
T Consensus        80 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~--  157 (261)
T 3n74_A           80 KFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNL--  157 (261)
T ss_dssp             HHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTTC--
T ss_pred             hcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCCc--
Confidence               679999999975421     133566788999999988888877332    1    4579999997765544332  


Q ss_pred             ccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCch-hHHHHHHHhhCCCC
Q 023689          144 KVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNA-SCAVLQQLLQGSKD  219 (278)
Q Consensus       144 ~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~-~~~~~~~~~~~~~~  219 (278)
                                        ..|+.+|.+.+.+.+.++.+   +|+++++++||.+.++........ .......+....  
T Consensus       158 ------------------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~--  217 (261)
T 3n74_A          158 ------------------AWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSI--  217 (261)
T ss_dssp             ------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------C--
T ss_pred             ------------------cHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHHHhhcC--
Confidence                              56999999999999988876   589999999999999875433111 111111222222  


Q ss_pred             cccccccCcccHHHHHHHHHhhhcCCC--CCceE-Eec
Q 023689          220 TQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRY-LCT  254 (278)
Q Consensus       220 ~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~-~~~  254 (278)
                          ....+++++|+|+++++++....  ..|.. .+.
T Consensus       218 ----~~~~~~~~~dva~~~~~l~s~~~~~itG~~i~vd  251 (261)
T 3n74_A          218 ----PMGRLLKPDDLAEAAAFLCSPQASMITGVALDVD  251 (261)
T ss_dssp             ----TTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEES
T ss_pred             ----CcCCCcCHHHHHHHHHHHcCCcccCcCCcEEEec
Confidence                24578999999999999986433  34644 443

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.95  E-value=7.2e-28  Score=199.43  Aligned_cols=239  Identities=16%  Similarity=0.145  Sum_probs=164.5

Q ss_pred             cccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCC--CCceEEEEccCCChhhHHHHhc
Q 023689            3 SEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAG--DANLRVFEADVLDSGAVSRAVE   79 (278)
Q Consensus         3 ~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~--~~~v~~~~~Dl~d~~~~~~~~~   79 (278)
                      .|+.+++|++|||||+|+||++++++|+++|+ .|++..|+.+..+... .+....  ..++.++.+|++|++++.++++
T Consensus        20 ~m~~l~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~   98 (297)
T 1xhl_A           20 HMARFSGKSVIITGSSNGIGRSAAVIFAKEGA-QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIIN   98 (297)
T ss_dssp             ---CCTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHH
Confidence            45567789999999999999999999999999 8988888764432221 111001  0168899999999999888876


Q ss_pred             -------CccEEEEecccCCCC------CCCCchhhhhhhHHhHHHHHHHHHHh----cCCCEEEEecceeeeecC-CCC
Q 023689           80 -------GCKGVFHVASPCTLE------DPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPN-PGW  141 (278)
Q Consensus        80 -------~~d~vi~~a~~~~~~------~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~v~~Ss~~~~~~~-~~~  141 (278)
                             ++|+|||+||.....      ...++++..+++|+.++.++++++.+    .+ ++||++||..+..+. +. 
T Consensus        99 ~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~~~~-  176 (297)
T 1xhl_A           99 TTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAHSG-  176 (297)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSCCTT-
T ss_pred             HHHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCCCCC-
Confidence                   689999999975432      12346788999999999998887744    45 799999997765443 22 


Q ss_pred             CCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCC-ch-----hHHHHHH
Q 023689          142 KGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYL-NA-----SCAVLQQ  212 (278)
Q Consensus       142 ~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~-~~-----~~~~~~~  212 (278)
                                         ...|+.+|.+.+.+.+.++.+   +|+++++++||.+.++...... ..     .......
T Consensus       177 -------------------~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  237 (297)
T 1xhl_A          177 -------------------YPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGS  237 (297)
T ss_dssp             -------------------SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHH
T ss_pred             -------------------cchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHH
Confidence                               157999999999998888754   5999999999999998532210 00     0011111


Q ss_pred             HhhCCCCcccccccCcccHHHHHHHHHhhhcCC---CCCce-EEecCc-cccHHHHHHHHHH
Q 023689          213 LLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP---AASGR-YLCTNG-IYQFGDFAERVSK  269 (278)
Q Consensus       213 ~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~---~~~~~-~~~~~~-~~s~~e~~~~i~~  269 (278)
                      .....|      ...+.+++|+|+++++++...   ...|. +.+.++ .....+....+.+
T Consensus       238 ~~~~~p------~~r~~~pedvA~~v~~l~s~~~~~~itG~~i~vdGG~~~~~~~~~~~~~~  293 (297)
T 1xhl_A          238 RKECIP------VGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTLVMGMQTHDLMS  293 (297)
T ss_dssp             CTTTCT------TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCCGGGGSCHHH
T ss_pred             HHhcCC------CCCCcCHHHHHHHHHHHhCCcccCCccCcEEEECCCccccccccccchhh
Confidence            111111      346889999999999998654   34564 444433 4455554444443

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.95  E-value=5.8e-28  Score=196.52  Aligned_cols=222  Identities=18%  Similarity=0.145  Sum_probs=154.6

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCC-Ccccc-cCCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~-~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      +++|++|||||+|+||++++++|+++|+ .|++..|+.+. .+.+. .+......++.++.+|++|++++.++++     
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   80 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGA-DIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQ   80 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence            3568999999999999999999999999 88888887644 22221 1110001178899999999999888876     


Q ss_pred             --CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHH----hcCCCEEEEecceeeeecCCCCCCccccCC
Q 023689           80 --GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (278)
Q Consensus        80 --~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~  149 (278)
                        ++|++||+||.....    ...++++..+++|+.++.++++++.    +++.++||++||..++.+.+..        
T Consensus        81 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------  152 (260)
T 1x1t_A           81 MGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANK--------  152 (260)
T ss_dssp             HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTC--------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCCCC--------
Confidence              689999999975431    2335678899999999998888773    4567899999998776543321        


Q ss_pred             CCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCchh--------HHHHHHH-hhCC
Q 023689          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNAS--------CAVLQQL-LQGS  217 (278)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~~~--------~~~~~~~-~~~~  217 (278)
                                  ..|+.+|...+.+.+.++.+.   |+++++++||.+.++.........        ....... ....
T Consensus       153 ------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (260)
T 1x1t_A          153 ------------SAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQ  220 (260)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHC
T ss_pred             ------------chHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhccC
Confidence                        579999999999998888654   899999999999998643321000        0011111 1111


Q ss_pred             CCcccccccCcccHHHHHHHHHhhhcCCC--CCce-EEecC
Q 023689          218 KDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGR-YLCTN  255 (278)
Q Consensus       218 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~  255 (278)
                            ....+.+++|+|+++++++....  ..|. +.+.+
T Consensus       221 ------p~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdg  255 (260)
T 1x1t_A          221 ------PSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDG  255 (260)
T ss_dssp             ------TTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             ------CCCCCcCHHHHHHHHHHHhChhhcCCCCCEEEECC
Confidence                  23568899999999999986532  3464 44443

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.95  E-value=1.1e-27  Score=187.51  Aligned_cols=185  Identities=14%  Similarity=0.124  Sum_probs=144.6

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcC---ccEEEE
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG---CKGVFH   86 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~---~d~vi~   86 (278)
                      |++|||||+|+||++++++|+ +|+ +|+++.|+..                 .+.+|++|+++++++++.   +|+|||
T Consensus         4 M~vlVtGasg~iG~~~~~~l~-~g~-~V~~~~r~~~-----------------~~~~D~~~~~~~~~~~~~~~~~d~vi~   64 (202)
T 3d7l_A            4 MKILLIGASGTLGSAVKERLE-KKA-EVITAGRHSG-----------------DVTVDITNIDSIKKMYEQVGKVDAIVS   64 (202)
T ss_dssp             CEEEEETTTSHHHHHHHHHHT-TTS-EEEEEESSSS-----------------SEECCTTCHHHHHHHHHHHCCEEEEEE
T ss_pred             cEEEEEcCCcHHHHHHHHHHH-CCC-eEEEEecCcc-----------------ceeeecCCHHHHHHHHHHhCCCCEEEE
Confidence            479999999999999999999 999 8999888653                 356999999999998875   899999


Q ss_pred             ecccCCCCC----CCCchhhhhhhHHhHHHHHHHHHHhc---CCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhc
Q 023689           87 VASPCTLED----PVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKS  159 (278)
Q Consensus        87 ~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~  159 (278)
                      +||......    ..+.++..+++|+.++.++++++.+.   + ++||++||..+..+.+.                   
T Consensus        65 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~~~-------------------  124 (202)
T 3d7l_A           65 ATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDK-GSFTLTTGIMMEDPIVQ-------------------  124 (202)
T ss_dssp             CCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEE-EEEEEECCGGGTSCCTT-------------------
T ss_pred             CCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccC-CEEEEEcchhhcCCCCc-------------------
Confidence            999654321    22445678899999999999999776   4 68999999766443222                   


Q ss_pred             cCchhhhHHHHHHHHHHHHHHh--cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHHHHHHH
Q 023689          160 RKKWYPVSKTLAEKAAWEFAEK--HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKA  237 (278)
Q Consensus       160 ~~~~y~~sK~~~e~~~~~~~~~--~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  237 (278)
                       ...|+.+|...|.+.+.++.+  +|++++++||+.++|+...            ...+.      ..+++++++|+|++
T Consensus       125 -~~~Y~~sK~~~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~~~------------~~~~~------~~~~~~~~~dva~~  185 (202)
T 3d7l_A          125 -GASAAMANGAVTAFAKSAAIEMPRGIRINTVSPNVLEESWDK------------LEPFF------EGFLPVPAAKVARA  185 (202)
T ss_dssp             -CHHHHHHHHHHHHHHHHHTTSCSTTCEEEEEEECCBGGGHHH------------HGGGS------TTCCCBCHHHHHHH
T ss_pred             -cHHHHHHHHHHHHHHHHHHHHccCCeEEEEEecCccCCchhh------------hhhhc------cccCCCCHHHHHHH
Confidence             157999999999999988865  3999999999999988421            11111      24678999999999


Q ss_pred             HHhhhcCCCCCc-eEEe
Q 023689          238 QVLLFESPAASG-RYLC  253 (278)
Q Consensus       238 ~~~~~~~~~~~~-~~~~  253 (278)
                      ++.++.+. ..| .|++
T Consensus       186 ~~~~~~~~-~~G~~~~v  201 (202)
T 3d7l_A          186 FEKSVFGA-QTGESYQV  201 (202)
T ss_dssp             HHHHHHSC-CCSCEEEE
T ss_pred             HHHhhhcc-ccCceEec
Confidence            99888543 334 4543

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.95  E-value=4.9e-27  Score=193.67  Aligned_cols=222  Identities=20%  Similarity=0.144  Sum_probs=158.4

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCC-------------cccc----cCCCCCCCceEEEEccC
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-------------SHLF----ALPGAGDANLRVFEADV   68 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~-------------~~~~----~~~~~~~~~v~~~~~Dl   68 (278)
                      .+++|++|||||+|+||++++++|.++|+ .|++.+|+....             +.+.    .+.... .++.++++|+
T Consensus         8 ~l~~k~~lVTGas~gIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv   85 (286)
T 3uve_A            8 RVEGKVAFVTGAARGQGRSHAVRLAQEGA-DIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHN-RRIVTAEVDV   85 (286)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTT-CCEEEEECCT
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeccccccccccccccccCCHHHHHHHHHHHhhcC-CceEEEEcCC
Confidence            56789999999999999999999999999 888888763221             1111    111112 2789999999


Q ss_pred             CChhhHHHHhc-------CccEEEEecccCCCCC-----CCCchhhhhhhHHhHHHHHHHHHHh----cC-CCEEEEecc
Q 023689           69 LDSGAVSRAVE-------GCKGVFHVASPCTLED-----PVDPEKELILPAVQGTLNVLEAAKR----FG-VRRVVVTSS  131 (278)
Q Consensus        69 ~d~~~~~~~~~-------~~d~vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~ll~~~~~----~~-~~~~v~~Ss  131 (278)
                      +|+++++++++       ++|++|||||......     ..++++..+++|+.++.++++++..    ++ .++||++||
T Consensus        86 ~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS  165 (286)
T 3uve_A           86 RDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSS  165 (286)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECc
Confidence            99999988876       6899999999755422     3456788999999999999887743    23 468999999


Q ss_pred             eeeeecCCCCCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCc----
Q 023689          132 ISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN----  204 (278)
Q Consensus       132 ~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~----  204 (278)
                      ..++.+.+..                    ..|+.+|...+.+.+.++.+   +|+++++++||.|.++.......    
T Consensus       166 ~~~~~~~~~~--------------------~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~  225 (286)
T 3uve_A          166 VGGLKAYPHT--------------------GHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMF  225 (286)
T ss_dssp             GGGTSCCTTC--------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHH
T ss_pred             hhhccCCCCc--------------------cHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhc
Confidence            8876654432                    57999999999998888876   58999999999999987543100    


Q ss_pred             ------hhHHHHHHHhhCCCCcccccccCcccHHHHHHHHHhhhcCCC--CCceEEe
Q 023689          205 ------ASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLC  253 (278)
Q Consensus       205 ------~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~  253 (278)
                            ....-........    ......+.+++|+|+++++++....  ..|..+.
T Consensus       226 ~~~~~~~~~~~~~~~~~~~----~~~p~r~~~p~dvA~~v~fL~s~~a~~itG~~i~  278 (286)
T 3uve_A          226 RPDLENPGPDDMAPICQMF----HTLPIPWVEPIDISNAVLFFASDEARYITGVTLP  278 (286)
T ss_dssp             CTTSSSCCHHHHHHHHHTT----CSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             cccccccchhhHHHHHHhh----hccCCCcCCHHHHHHHHHHHcCccccCCcCCEEe
Confidence                  0000000100000    0011567899999999999986543  3465433

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.95  E-value=4.3e-28  Score=195.46  Aligned_cols=206  Identities=17%  Similarity=0.131  Sum_probs=152.6

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEE-ecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc-------
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINAT-VFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~-~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------   79 (278)
                      +|++|||||+|+||++++++|+++|+ .|++. .|+.+..+.+. .+.... .++.++.+|++|++++.++++       
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~-~v~~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGC-KVLVNYARSAKAAEEVSKQIEAYG-GQAITFGGDVSKEADVEAMMKTAIDAWG   78 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHT-CEEEEEECCTTSHHHHHHHHHHHHHHSS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcC-CcEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            47999999999999999999999999 77774 66543322221 111111 178899999999999988876       


Q ss_pred             CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHh----cCCCEEEEecceeeeecCCCCCCccccCCCC
Q 023689           80 GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (278)
Q Consensus        80 ~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~  151 (278)
                      ++|+|||+||.....    ...++++..+++|+.++.++++++.+    .+.++||++||..++++.+..          
T Consensus        79 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~----------  148 (244)
T 1edo_A           79 TIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQ----------  148 (244)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTC----------
T ss_pred             CCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCCCC----------
Confidence            689999999975532    22346678899999999998888754    467899999998776654332          


Q ss_pred             CchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCc
Q 023689          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (278)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (278)
                                ..|+.+|...+.+.+.++++   .|++++++|||.++++.....   ............|      ...+
T Consensus       149 ----------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~------~~~~  209 (244)
T 1edo_A          149 ----------ANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKL---GEDMEKKILGTIP------LGRT  209 (244)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT---CHHHHHHHHTSCT------TCSC
T ss_pred             ----------ccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhc---ChHHHHHHhhcCC------CCCC
Confidence                      57999999999888888765   489999999999998854322   1222223333222      3458


Q ss_pred             ccHHHHHHHHHhhhcCC
Q 023689          229 VPVKDVAKAQVLLFESP  245 (278)
Q Consensus       229 i~~~D~a~~~~~~~~~~  245 (278)
                      ++++|+|+++++++.++
T Consensus       210 ~~~~dva~~~~~l~~~~  226 (244)
T 1edo_A          210 GQPENVAGLVEFLALSP  226 (244)
T ss_dssp             BCHHHHHHHHHHHHHCS
T ss_pred             CCHHHHHHHHHHHhCCC
Confidence            89999999999998543

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.95  E-value=7.8e-28  Score=196.21  Aligned_cols=222  Identities=15%  Similarity=0.140  Sum_probs=155.3

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCC-CcccccCCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~-~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      .+.||++|||||+|+||++++++|+++|+ .|++..|+... .+.+.........++.++++|++|++++.++++     
T Consensus         4 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   82 (264)
T 3i4f_A            4 GRFVRHALITAGTKGLGKQVTEKLLAKGY-SVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSH   82 (264)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             ccccCEEEEeCCCchhHHHHHHHHHHCCC-EEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            34578999999999999999999999999 88887665432 222221111111279999999999999988876     


Q ss_pred             --CccEEEEecccC--CC----CCCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCcccc
Q 023689           80 --GCKGVFHVASPC--TL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFD  147 (278)
Q Consensus        80 --~~d~vi~~a~~~--~~----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~  147 (278)
                        ++|+|||+||..  ..    +...+.++..+++|+.++.++++++    ++++.+++|++||..+....+.       
T Consensus        83 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~-------  155 (264)
T 3i4f_A           83 FGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGW-------  155 (264)
T ss_dssp             HSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCCC-------
T ss_pred             hCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCCC-------
Confidence              789999999942  21    2233466888999999999999988    5667789999998633211111       


Q ss_pred             CCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccc
Q 023689          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (278)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (278)
                                 .....|+.+|.+.+.+.+.++.+   +|+++++++||.++++.....   ............      .
T Consensus       156 -----------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~------p  215 (264)
T 3i4f_A          156 -----------IYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEAT---IQEARQLKEHNT------P  215 (264)
T ss_dssp             -----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCC---HHHHHHC------------
T ss_pred             -----------CCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhc---cHHHHHHHhhcC------C
Confidence                       11257999999999999888876   699999999999999875543   112111111111      2


Q ss_pred             ccCcccHHHHHHHHHhhhcCCC--CCceE-EecC
Q 023689          225 WLGAVPVKDVAKAQVLLFESPA--ASGRY-LCTN  255 (278)
Q Consensus       225 ~~~~i~~~D~a~~~~~~~~~~~--~~~~~-~~~~  255 (278)
                      ...+.+++|+|+++++++....  ..|.. .+.+
T Consensus       216 ~~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdG  249 (264)
T 3i4f_A          216 IGRSGTGEDIARTISFLCEDDSDMITGTIIEVTG  249 (264)
T ss_dssp             --CCCCHHHHHHHHHHHHSGGGTTCCSCEEEESC
T ss_pred             CCCCcCHHHHHHHHHHHcCcccCCCCCcEEEEcC
Confidence            3557899999999999987643  34654 4443

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.95  E-value=1.1e-27  Score=197.11  Aligned_cols=220  Identities=18%  Similarity=0.147  Sum_probs=163.0

Q ss_pred             CccccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc-
Q 023689            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-   79 (278)
Q Consensus         1 m~~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-   79 (278)
                      |..|+.+++|++|||||+|+||++++++|+++|+ .|++.+|+.+..+.+....  . .++.++++|++|.+++.++++ 
T Consensus        22 m~~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~--~-~~~~~~~~Dl~~~~~v~~~~~~   97 (281)
T 3ppi_A           22 MVTIKQFEGASAIVSGGAGGLGEATVRRLHADGL-GVVIADLAAEKGKALADEL--G-NRAEFVSTNVTSEDSVLAAIEA   97 (281)
T ss_dssp             --CCGGGTTEEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH--C-TTEEEEECCTTCHHHHHHHHHH
T ss_pred             hhhhhccCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHh--C-CceEEEEcCCCCHHHHHHHHHH
Confidence            3456678889999999999999999999999999 8988988765443332111  1 178999999999999988876 


Q ss_pred             -----CccEEEEe-cccCCCC---------CCCCchhhhhhhHHhHHHHHHHHHHh----------cCCCEEEEecceee
Q 023689           80 -----GCKGVFHV-ASPCTLE---------DPVDPEKELILPAVQGTLNVLEAAKR----------FGVRRVVVTSSISA  134 (278)
Q Consensus        80 -----~~d~vi~~-a~~~~~~---------~~~~~~~~~~~~n~~~~~~ll~~~~~----------~~~~~~v~~Ss~~~  134 (278)
                           ++|++||+ |+.....         ...+.++..+++|+.++.++++++..          .+.++||++||..+
T Consensus        98 ~~~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~  177 (281)
T 3ppi_A           98 ANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAG  177 (281)
T ss_dssp             HTTSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGG
T ss_pred             HHHhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccc
Confidence                 57999999 4443221         11234688999999999999887742          23468999999887


Q ss_pred             eecCCCCCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCchhHHHHH
Q 023689          135 IVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQ  211 (278)
Q Consensus       135 ~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~~~~~~~~  211 (278)
                      +.+.+..                    ..|+.+|.+.+.+.+.++.+.   |+++++++||.|.++.....   ......
T Consensus       178 ~~~~~~~--------------------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~---~~~~~~  234 (281)
T 3ppi_A          178 YEGQIGQ--------------------TAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESV---GEEALA  234 (281)
T ss_dssp             TSCCTTC--------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTT---CHHHHH
T ss_pred             cCCCCCC--------------------cccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcc---cHHHHH
Confidence            6554432                    579999999998888887654   89999999999988754332   123333


Q ss_pred             HHhhCCCCcccccccCcccHHHHHHHHHhhhcCCCCCceEE
Q 023689          212 QLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGRYL  252 (278)
Q Consensus       212 ~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~  252 (278)
                      ......+.     ...+++++|+|+++++++.+....|..+
T Consensus       235 ~~~~~~~~-----~~~~~~pedvA~~v~~l~s~~~~tG~~i  270 (281)
T 3ppi_A          235 KFAANIPF-----PKRLGTPDEFADAAAFLLTNGYINGEVM  270 (281)
T ss_dssp             HHHHTCCS-----SSSCBCHHHHHHHHHHHHHCSSCCSCEE
T ss_pred             HHHhcCCC-----CCCCCCHHHHHHHHHHHHcCCCcCCcEE
Confidence            44444332     2567899999999999998766667543

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.95  E-value=1.2e-27  Score=195.35  Aligned_cols=220  Identities=18%  Similarity=0.171  Sum_probs=157.6

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      .+++|++|||||+|+||++++++|+++|+ .|++..|+.+..+... .+......++.++.+|++|++++.++++     
T Consensus        18 ~l~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   96 (267)
T 1vl8_A           18 DLRGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK   96 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            45679999999999999999999999999 8988888754332221 1100001168899999999999888876     


Q ss_pred             --CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEeccee-eeecCCCCCCccccC
Q 023689           80 --GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSIS-AIVPNPGWKGKVFDE  148 (278)
Q Consensus        80 --~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~-~~~~~~~~~~~~~~E  148 (278)
                        ++|+|||+||.....    ...++++..+++|+.++.++++++    ++++.++||++||.. +..+.+.        
T Consensus        97 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~--------  168 (267)
T 1vl8_A           97 FGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPN--------  168 (267)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSS--------
T ss_pred             cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCCCC--------
Confidence              689999999975432    123456788999999999888876    445678999999976 4333222        


Q ss_pred             CCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccc
Q 023689          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (278)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (278)
                                  ...|+.+|...+.+.+.++.+   +|+++++++||.+.++....... ............+      .
T Consensus       169 ------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~p------~  229 (267)
T 1vl8_A          169 ------------ISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFS-DPEKLDYMLKRIP------L  229 (267)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHT-CHHHHHHHHHTCT------T
T ss_pred             ------------ChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcccccccccc-ChHHHHHHHhhCC------C
Confidence                        257999999999999888865   49999999999999886321100 0122222223222      2


Q ss_pred             cCcccHHHHHHHHHhhhcCCC--CCceEEe
Q 023689          226 LGAVPVKDVAKAQVLLFESPA--ASGRYLC  253 (278)
Q Consensus       226 ~~~i~~~D~a~~~~~~~~~~~--~~~~~~~  253 (278)
                      ..+++++|+|+++++++....  ..|..+.
T Consensus       230 ~~~~~p~dvA~~v~~l~s~~~~~itG~~i~  259 (267)
T 1vl8_A          230 GRTGVPEDLKGVAVFLASEEAKYVTGQIIF  259 (267)
T ss_dssp             SSCBCGGGGHHHHHHHHSGGGTTCCSCEEE
T ss_pred             CCCcCHHHHHHHHHHHcCccccCCcCCeEE
Confidence            457899999999999987532  3465443

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.95  E-value=1e-27  Score=195.28  Aligned_cols=206  Identities=18%  Similarity=0.120  Sum_probs=150.4

Q ss_pred             cccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCCCCCCceEEEEccCCChhhHHHHhc--
Q 023689            3 SEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE--   79 (278)
Q Consensus         3 ~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~--   79 (278)
                      .|..+++|++|||||+|+||++++++|+++|+ .|+++.|+.+..+.+.. +.... .++.++.+|++|++++.++++  
T Consensus        23 ~m~~l~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~  100 (262)
T 3rkr_A           23 HMSSLSGQVAVVTGASRGIGAAIARKLGSLGA-RVVLTARDVEKLRAVEREIVAAG-GEAESHACDLSHSDAIAAFATGV  100 (262)
T ss_dssp             --CTTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT-CEEEEEECCTTCHHHHHHHHHHH
T ss_pred             hhhccCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhC-CceeEEEecCCCHHHHHHHHHHH
Confidence            46677789999999999999999999999999 89999887654333221 11111 278999999999999888775  


Q ss_pred             -----CccEEEEecccCCC-----CCCCCchhhhhhhHHhHHHHHHHHHH----hcCCCEEEEecceeeeecCCCCCCcc
Q 023689           80 -----GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKV  145 (278)
Q Consensus        80 -----~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~  145 (278)
                           ++|+|||+||....     +...++++..+++|+.++.++++++.    +.+.++||++||..++.+.+..    
T Consensus       101 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----  176 (262)
T 3rkr_A          101 LAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADG----  176 (262)
T ss_dssp             HHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCTTC----
T ss_pred             HHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCC----
Confidence                 48999999997322     22335678899999999998888763    4567899999998876554332    


Q ss_pred             ccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccc
Q 023689          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQE  222 (278)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (278)
                                      ..|+.+|.+.+.+.+.++.+   .|+++++++||.+.++......           ...     
T Consensus       177 ----------------~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-----------~~~-----  224 (262)
T 3rkr_A          177 ----------------AAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLS-----------AKK-----  224 (262)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------------------------
T ss_pred             ----------------chHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCcccccc-----------ccc-----
Confidence                            57999999999999888865   5999999999999887533210           000     


Q ss_pred             ccccCcccHHHHHHHHHhhhcCCCC
Q 023689          223 YHWLGAVPVKDVAKAQVLLFESPAA  247 (278)
Q Consensus       223 ~~~~~~i~~~D~a~~~~~~~~~~~~  247 (278)
                       ....+++++|+|+++++++.....
T Consensus       225 -~~~~~~~p~dvA~~v~~l~s~~~~  248 (262)
T 3rkr_A          225 -SALGAIEPDDIADVVALLATQADQ  248 (262)
T ss_dssp             -----CCCHHHHHHHHHHHHTCCTT
T ss_pred             -ccccCCCHHHHHHHHHHHhcCccc
Confidence             134567999999999999876544

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.95  E-value=2.8e-28  Score=199.76  Aligned_cols=223  Identities=15%  Similarity=0.091  Sum_probs=161.6

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      .+++|++|||||+|+||++++++|+++|+ .|++..|+.+..+.... +.... .++.++.+|++|++++.++++     
T Consensus        30 ~l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (275)
T 4imr_A           30 GLRGRTALVTGSSRGIGAAIAEGLAGAGA-HVILHGVKPGSTAAVQQRIIASG-GTAQELAGDLSEAGAGTDLIERAEAI  107 (275)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSTTTTHHHHHHHHHTT-CCEEEEECCTTSTTHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcC-CeEEEEEecCCCHHHHHHHHHHHHHh
Confidence            56789999999999999999999999999 89999997766544322 11112 278999999999998888876     


Q ss_pred             -CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccCCC
Q 023689           80 -GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (278)
Q Consensus        80 -~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~  150 (278)
                       ++|++|||||....    +...++++..+++|+.++.++++++    ++++.++||++||..++.+.+.          
T Consensus       108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~----------  177 (275)
T 4imr_A          108 APVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKSV----------  177 (275)
T ss_dssp             SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT----------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCC----------
Confidence             68999999997543    2234567888999999999988887    4456689999999777553222          


Q ss_pred             CCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccC
Q 023689          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (278)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (278)
                                ...|+.||.+.+.+.+.++.+.   |+++++++||.+.++.....................     ....
T Consensus       178 ----------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~-----p~~r  242 (275)
T 4imr_A          178 ----------VTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLN-----WMGR  242 (275)
T ss_dssp             ----------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHS-----TTCS
T ss_pred             ----------chhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcC-----ccCC
Confidence                      1469999999999998888764   899999999999887532210001112222222210     1345


Q ss_pred             cccHHHHHHHHHhhhcCCC--CCceE-EecC
Q 023689          228 AVPVKDVAKAQVLLFESPA--ASGRY-LCTN  255 (278)
Q Consensus       228 ~i~~~D~a~~~~~~~~~~~--~~~~~-~~~~  255 (278)
                      +..++|+|+++++++....  ..|.. .+.+
T Consensus       243 ~~~pedvA~~v~fL~s~~a~~itG~~i~vdG  273 (275)
T 4imr_A          243 AGRPEEMVGAALFLASEACSFMTGETIFLTG  273 (275)
T ss_dssp             CBCGGGGHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             CcCHHHHHHHHHHHcCcccCCCCCCEEEeCC
Confidence            6789999999999987543  34644 4433

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.95  E-value=5e-28  Score=202.83  Aligned_cols=219  Identities=11%  Similarity=0.071  Sum_probs=157.6

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCC-CC-----CcccccCCCCCCCceEEEEccCCChhhHHHHhcCc
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG-SD-----SSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGC   81 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~-~~-----~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~   81 (278)
                      +||+||||||||+||++++++|++.|+ .|++++|+. ..     ...+..+.   ..+++++.+|++|++++.++++++
T Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~l~~~~---~~~v~~v~~D~~d~~~l~~a~~~~   78 (321)
T 3c1o_A            3 HMEKIIIYGGTGYIGKFMVRASLSFSH-PTFIYARPLTPDSTPSSVQLREEFR---SMGVTIIEGEMEEHEKMVSVLKQV   78 (321)
T ss_dssp             -CCCEEEETTTSTTHHHHHHHHHHTTC-CEEEEECCCCTTCCHHHHHHHHHHH---HTTCEEEECCTTCHHHHHHHHTTC
T ss_pred             cccEEEEEcCCchhHHHHHHHHHhCCC-cEEEEECCcccccChHHHHHHHHhh---cCCcEEEEecCCCHHHHHHHHcCC
Confidence            367899999999999999999999998 899999976 21     11111110   017899999999999999999999


Q ss_pred             cEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcC-CCEEEEecceeeeecCCCCCCccccCCCCCchhhhhcc
Q 023689           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSR  160 (278)
Q Consensus        82 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  160 (278)
                      |+|||+|+...               +.++.+++++|++.+ +++||+ |+ .+   .      ..+|..+..+.     
T Consensus        79 d~vi~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S~-~g---~------~~~~~~~~~p~-----  127 (321)
T 3c1o_A           79 DIVISALPFPM---------------ISSQIHIINAIKAAGNIKRFLP-SD-FG---C------EEDRIKPLPPF-----  127 (321)
T ss_dssp             SEEEECCCGGG---------------SGGGHHHHHHHHHHCCCCEEEC-SC-CS---S------CGGGCCCCHHH-----
T ss_pred             CEEEECCCccc---------------hhhHHHHHHHHHHhCCccEEec-cc-cc---c------CccccccCCCc-----
Confidence            99999997522               456789999999998 999983 43 21   1      11232322221     


Q ss_pred             CchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHH---HHhhCCCCc-c--cccccCcccHHHH
Q 023689          161 KKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQ---QLLQGSKDT-Q--EYHWLGAVPVKDV  234 (278)
Q Consensus       161 ~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~---~~~~~~~~~-~--~~~~~~~i~~~D~  234 (278)
                      ...| .+|...|++++    +.+++++++||+.++++..       ..+..   ....+.... .  ++..+++++++|+
T Consensus       128 ~~~y-~sK~~~e~~~~----~~~~~~~~lrp~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv  195 (321)
T 3c1o_A          128 ESVL-EKKRIIRRAIE----AAALPYTYVSANCFGAYFV-------NYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDI  195 (321)
T ss_dssp             HHHH-HHHHHHHHHHH----HHTCCBEEEECCEEHHHHH-------HHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHH
T ss_pred             chHH-HHHHHHHHHHH----HcCCCeEEEEeceeccccc-------cccccccccccccCceEEecCCCcceeEeeHHHH
Confidence            1468 99999998885    5689999999998887521       11111   001122211 1  3467899999999


Q ss_pred             HHHHHhhhcCCCCCc-eE-Eec-CccccHHHHHHHHHHhCCC
Q 023689          235 AKAQVLLFESPAASG-RY-LCT-NGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       235 a~~~~~~~~~~~~~~-~~-~~~-~~~~s~~e~~~~i~~~~~~  273 (278)
                      |++++.++.++...| .| +.+ ++.+|+.|+++.+.+.++.
T Consensus       196 a~~~~~~l~~~~~~g~~~~~~g~~~~~t~~e~~~~~~~~~g~  237 (321)
T 3c1o_A          196 AKYTIKVACDPRCCNRIVIYRPPKNIISQNELISLWEAKSGL  237 (321)
T ss_dssp             HHHHHHHHHCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHhCccccCeEEEEeCCCCcccHHHHHHHHHHHcCC
Confidence            999999998765444 44 444 4789999999999998853

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.95  E-value=4.8e-27  Score=191.72  Aligned_cols=222  Identities=13%  Similarity=0.121  Sum_probs=164.3

Q ss_pred             ccCCceEEEeCcchh--hHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCC-CCCceEEEEccCCChhhHHHHhc---
Q 023689            6 EKEEETVCVTGANGF--IGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGA-GDANLRVFEADVLDSGAVSRAVE---   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~--iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~~~~~~~---   79 (278)
                      ++++|++|||||+|+  ||++++++|+++|+ .|++..|+....+....+... ...++.++.+|++|+++++++++   
T Consensus         4 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   82 (266)
T 3oig_A            4 SLEGRNIVVMGVANKRSIAWGIARSLHEAGA-RLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIK   82 (266)
T ss_dssp             CCTTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHH
T ss_pred             ccCCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHH
Confidence            567899999999977  99999999999999 888888875433333222111 11268999999999999888876   


Q ss_pred             ----CccEEEEecccCCC--------CCCCCchhhhhhhHHhHHHHHHHHHHhc--CCCEEEEecceeeeecCCCCCCcc
Q 023689           80 ----GCKGVFHVASPCTL--------EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKV  145 (278)
Q Consensus        80 ----~~d~vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~  145 (278)
                          ++|++||+||....        +...+.+...+++|+.++.++++++...  ..++||++||..++.+.+..    
T Consensus        83 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~----  158 (266)
T 3oig_A           83 EQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVMPNY----  158 (266)
T ss_dssp             HHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTTT----
T ss_pred             HHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccccCCCc----
Confidence                67999999997541        2233466788999999999999999765  23589999998876554432    


Q ss_pred             ccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccc
Q 023689          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQE  222 (278)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (278)
                                      ..|+.+|.+.+.+.+.++.+   +|+++++++||.+.++....... ............+    
T Consensus       159 ----------------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~----  217 (266)
T 3oig_A          159 ----------------NVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISD-FNSILKDIEERAP----  217 (266)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTT-HHHHHHHHHHHST----
T ss_pred             ----------------chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccc-hHHHHHHHHhcCC----
Confidence                            57999999999998888875   48999999999999976544321 2233333333333    


Q ss_pred             ccccCcccHHHHHHHHHhhhcCCC--CCceE-EecC
Q 023689          223 YHWLGAVPVKDVAKAQVLLFESPA--ASGRY-LCTN  255 (278)
Q Consensus       223 ~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~-~~~~  255 (278)
                        ...+.+++|+|+++++++....  ..|.. .+.+
T Consensus       218 --~~~~~~p~dva~~v~~l~s~~~~~~tG~~i~vdG  251 (266)
T 3oig_A          218 --LRRTTTPEEVGDTAAFLFSDMSRGITGENLHVDS  251 (266)
T ss_dssp             --TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             --CCCCCCHHHHHHHHHHHcCCchhcCcCCEEEECC
Confidence              3457899999999999987643  34654 4443

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.95  E-value=1.4e-27  Score=194.83  Aligned_cols=219  Identities=20%  Similarity=0.210  Sum_probs=153.5

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEec-CCCCCccccc-CCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVF-PGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r-~~~~~~~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      +++|++|||||+|+||++++++|+++|+ .|++..+ +.+..+.+.. +.... .++.++++|++|+++++++++     
T Consensus        25 ~~~k~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~  102 (267)
T 3u5t_A           25 ETNKVAIVTGASRGIGAAIAARLASDGF-TVVINYAGKAAAAEEVAGKIEAAG-GKALTAQADVSDPAAVRRLFATAEEA  102 (267)
T ss_dssp             --CCEEEEESCSSHHHHHHHHHHHHHTC-EEEEEESSCSHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcC-CeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999 7776644 3322222211 11111 278899999999999888876     


Q ss_pred             --CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHhc--CCCEEEEecceeeeecCCCCCCccccCCCC
Q 023689           80 --GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (278)
Q Consensus        80 --~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~  151 (278)
                        ++|++|||||.....    ...+.++..+++|+.++.++++++.+.  ..+++|++||..+..+.+..          
T Consensus       103 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----------  172 (267)
T 3u5t_A          103 FGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLHPSY----------  172 (267)
T ss_dssp             HSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCCTTC----------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCCCCc----------
Confidence              689999999976542    223457888999999999999988654  23589999997776554432          


Q ss_pred             CchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCc
Q 023689          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (278)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (278)
                                ..|+.+|.+.+.+.+.++.+.   |+++++++||.|.++......  .......+....|      ...+
T Consensus       173 ----------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~p------~~r~  234 (267)
T 3u5t_A          173 ----------GIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGK--SDEVRDRFAKLAP------LERL  234 (267)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC-------------CHHHHHTSST------TCSC
T ss_pred             ----------hHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccC--CHHHHHHHHhcCC------CCCC
Confidence                      579999999999999999764   899999999999988643211  1111222223222      3567


Q ss_pred             ccHHHHHHHHHhhhcCCCC--CceE-EecC
Q 023689          229 VPVKDVAKAQVLLFESPAA--SGRY-LCTN  255 (278)
Q Consensus       229 i~~~D~a~~~~~~~~~~~~--~~~~-~~~~  255 (278)
                      .+++|+|+++++++.....  .|.. .+.+
T Consensus       235 ~~pedvA~~v~~L~s~~~~~itG~~i~vdG  264 (267)
T 3u5t_A          235 GTPQDIAGAVAFLAGPDGAWVNGQVLRANG  264 (267)
T ss_dssp             BCHHHHHHHHHHHHSTTTTTCCSEEEEESS
T ss_pred             cCHHHHHHHHHHHhCccccCccCCEEEeCC
Confidence            8999999999999875432  5654 4443

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.95  E-value=2.6e-28  Score=204.44  Aligned_cols=235  Identities=18%  Similarity=0.184  Sum_probs=169.0

Q ss_pred             cccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecC----------CCCCccc-ccCCCCCCCceEEEEccCCCh
Q 023689            3 SEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFP----------GSDSSHL-FALPGAGDANLRVFEADVLDS   71 (278)
Q Consensus         3 ~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~----------~~~~~~~-~~~~~~~~~~v~~~~~Dl~d~   71 (278)
                      .|..+++|++|||||+|+||++++++|+++|+ .|++.+|+          .+..+.. ..+.... .++.++.+|++|+
T Consensus        21 ~m~~l~gk~vlVTGas~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~   98 (322)
T 3qlj_A           21 SMGVVDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVGLDGSPASGGSAAQSVVDEITAAG-GEAVADGSNVADW   98 (322)
T ss_dssp             -CCTTTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTT-CEEEEECCCTTSH
T ss_pred             hhcccCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCcccccccccccHHHHHHHHHHHHhcC-CcEEEEECCCCCH
Confidence            46677889999999999999999999999999 88888776          1111111 1111112 2788999999999


Q ss_pred             hhHHHHhc-------CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHhcC----------CCEEEEec
Q 023689           72 GAVSRAVE-------GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRFG----------VRRVVVTS  130 (278)
Q Consensus        72 ~~~~~~~~-------~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~~----------~~~~v~~S  130 (278)
                      +++.++++       ++|++||+||.....    ...++++..+++|+.++.++++++...-          -++||++|
T Consensus        99 ~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~is  178 (322)
T 3qlj_A           99 DQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTS  178 (322)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEEC
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEc
Confidence            99888876       789999999976542    2345678899999999999998874331          15899999


Q ss_pred             ceeeeecCCCCCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhH
Q 023689          131 SISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASC  207 (278)
Q Consensus       131 s~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~  207 (278)
                      |..++.+.+..                    ..|+.||.+.+.+.+.++.+   +|+++++++|| +.++..........
T Consensus       179 S~~~~~~~~~~--------------------~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~~  237 (322)
T 3qlj_A          179 SGAGLQGSVGQ--------------------GNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMM  237 (322)
T ss_dssp             CHHHHHCBTTC--------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC--
T ss_pred             CHHHccCCCCC--------------------ccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhhh
Confidence            98887654432                    57999999999999988876   58999999999 77765433211110


Q ss_pred             HHHHHHhhCCCCcccccccCcccHHHHHHHHHhhhcCCCC--Cce-EEecCc------------------cccHHHHHHH
Q 023689          208 AVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAA--SGR-YLCTNG------------------IYQFGDFAER  266 (278)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~~-~~~~~~------------------~~s~~e~~~~  266 (278)
                         .         .+...+.+++++|+|+++++++.....  .|. +.+.++                  .+++.|+++.
T Consensus       238 ---~---------~~~~~~~~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~  305 (322)
T 3qlj_A          238 ---A---------TQDQDFDAMAPENVSPLVVWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPV  305 (322)
T ss_dssp             ------------------CCTTCGGGTHHHHHHHTSGGGGGCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHH
T ss_pred             ---h---------ccccccCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHH
Confidence               0         011234567899999999999865432  453 444332                  2367999999


Q ss_pred             HHHhCC
Q 023689          267 VSKLFP  272 (278)
Q Consensus       267 i~~~~~  272 (278)
                      +.+.++
T Consensus       306 ~~~~~~  311 (322)
T 3qlj_A          306 VADLLG  311 (322)
T ss_dssp             HHHHHH
T ss_pred             HHHHhh
Confidence            988774

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.95  E-value=1.2e-27  Score=194.81  Aligned_cols=214  Identities=22%  Similarity=0.192  Sum_probs=156.8

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc---
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE---   79 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---   79 (278)
                      |..+++|++|||||+|+||++++++|.++|+ .|++..|+.+..+... .+.    .++.++.+|++|+++++++++   
T Consensus         1 m~~l~~k~vlITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~   75 (263)
T 2a4k_A            1 MGRLSGKTILVTGAASGIGRAALDLFAREGA-SLVAVDREERLLAEAVAALE----AEAIAVVADVSDPKAVEAVFAEAL   75 (263)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCC----SSEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhc----CceEEEEcCCCCHHHHHHHHHHHH
Confidence            3456679999999999999999999999999 8998988765433322 221    178899999999999888876   


Q ss_pred             ----CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHhcC--CCEEEEecceeeeecCCCCCCccccCC
Q 023689           80 ----GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRFG--VRRVVVTSSISAIVPNPGWKGKVFDET  149 (278)
Q Consensus        80 ----~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~v~~Ss~~~~~~~~~~~~~~~~E~  149 (278)
                          ++|++||+||.....    ...++++..+++|+.++.++++++...-  .++||++||..++ +.+.         
T Consensus        76 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~-~~~~---------  145 (263)
T 2a4k_A           76 EEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-GAFG---------  145 (263)
T ss_dssp             HHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-CHHH---------
T ss_pred             HHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhc-CCCC---------
Confidence                479999999975432    1234567889999999999999986642  4689999997664 2111         


Q ss_pred             CCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccccc
Q 023689          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (278)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (278)
                                 ...|+.+|...+.+.+.++.+   +|+++++++||.+.++.....   ............|      ..
T Consensus       146 -----------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~p------~~  205 (263)
T 2a4k_A          146 -----------LAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGL---PPWAWEQEVGASP------LG  205 (263)
T ss_dssp             -----------HHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTS---CHHHHHHHHHTST------TC
T ss_pred             -----------cHHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhc---CHHHHHHHHhcCC------CC
Confidence                       146888888888877777754   489999999999999864432   1222233333333      24


Q ss_pred             CcccHHHHHHHHHhhhcCCC--CCceEE
Q 023689          227 GAVPVKDVAKAQVLLFESPA--ASGRYL  252 (278)
Q Consensus       227 ~~i~~~D~a~~~~~~~~~~~--~~~~~~  252 (278)
                      .+.+++|+|+++++++....  ..|.++
T Consensus       206 ~~~~p~dvA~~v~~l~s~~~~~~tG~~i  233 (263)
T 2a4k_A          206 RAGRPEEVAQAALFLLSEESAYITGQAL  233 (263)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             CCcCHHHHHHHHHHHhCccccCCcCCEE
Confidence            57899999999999987543  346543

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.95  E-value=1e-26  Score=187.71  Aligned_cols=209  Identities=21%  Similarity=0.135  Sum_probs=152.4

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc------
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~------   79 (278)
                      .+++|++|||||+|+||++++++|.++|+ .|++..|+.+..+           .+..+++|++|+++++++++      
T Consensus        12 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~-----------~~~~~~~D~~~~~~~~~~~~~~~~~~   79 (247)
T 1uzm_A           12 PFVSRSVLVTGGNRGIGLAIAQRLAADGH-KVAVTHRGSGAPK-----------GLFGVEVDVTDSDAVDRAFTAVEEHQ   79 (247)
T ss_dssp             CCCCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCT-----------TSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHH-----------HhcCeeccCCCHHHHHHHHHHHHHHc
Confidence            45678999999999999999999999999 8999988765432           22247899999999888876      


Q ss_pred             -CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHHH----hcCCCEEEEecceeeeecCCCCCCccccCCC
Q 023689           80 -GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (278)
Q Consensus        80 -~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~  150 (278)
                       ++|++||+||....    +...++++..+++|+.++.++++++.    +.+.++||++||..++++.+..         
T Consensus        80 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  150 (247)
T 1uzm_A           80 GPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQ---------  150 (247)
T ss_dssp             SSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CC---------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCCCC---------
Confidence             57999999997543    22335678899999999999888774    3567899999998776654332         


Q ss_pred             CCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccC
Q 023689          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (278)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (278)
                                 ..|+.+|...+.+.+.++.+   +|+++++++||.+.++.....   ............|      ...
T Consensus       151 -----------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~p------~~~  210 (247)
T 1uzm_A          151 -----------ANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRAL---DERIQQGALQFIP------AKR  210 (247)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHS---CHHHHHHHGGGCT------TCS
T ss_pred             -----------hhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhc---CHHHHHHHHhcCC------CCC
Confidence                       57999999999888888765   589999999999988742211   1111222222222      345


Q ss_pred             cccHHHHHHHHHhhhcCCC--CCceE-EecC
Q 023689          228 AVPVKDVAKAQVLLFESPA--ASGRY-LCTN  255 (278)
Q Consensus       228 ~i~~~D~a~~~~~~~~~~~--~~~~~-~~~~  255 (278)
                      +++++|+|+++++++....  ..|.+ .+.+
T Consensus       211 ~~~~~dvA~~~~~l~s~~~~~~~G~~i~vdg  241 (247)
T 1uzm_A          211 VGTPAEVAGVVSFLASEDASYISGAVIPVDG  241 (247)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CcCHHHHHHHHHHHcCccccCCcCCEEEECC
Confidence            7899999999999987532  34644 4443

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.95  E-value=3.8e-27  Score=193.15  Aligned_cols=224  Identities=20%  Similarity=0.190  Sum_probs=158.7

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc------
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~------   79 (278)
                      .+++|++|||||+|+||++++++|+++|+ .|++..|+.+..+......  . .++.++++|++|++++.++++      
T Consensus        26 ~l~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~--~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~  101 (277)
T 3gvc_A           26 DLAGKVAIVTGAGAGIGLAVARRLADEGC-HVLCADIDGDAADAAATKI--G-CGAAACRVDVSDEQQIIAMVDACVAAF  101 (277)
T ss_dssp             -CTTCEEEETTTTSTHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHH--C-SSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHc--C-CcceEEEecCCCHHHHHHHHHHHHHHc
Confidence            46789999999999999999999999999 8988988765433322111  1 178899999999999888776      


Q ss_pred             -CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHHH----hcCCCEEEEecceeeeecCCCCCCccccCCC
Q 023689           80 -GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (278)
Q Consensus        80 -~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~  150 (278)
                       ++|++||+||....    +...++++..+++|+.++.++++++.    +++.++||++||..+..+.+..         
T Consensus       102 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~---------  172 (277)
T 3gvc_A          102 GGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGT---------  172 (277)
T ss_dssp             SSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTB---------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCc---------
Confidence             68999999997654    22345678899999999988888774    3566789999998876554332         


Q ss_pred             CCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCc-cccccc
Q 023689          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT-QEYHWL  226 (278)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  226 (278)
                                 ..|+.+|.+.+.+.+.++.+   +|+++++++||.|+++...........   ......... ......
T Consensus       173 -----------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~~  238 (277)
T 3gvc_A          173 -----------GAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDG---ALGAGGARSMIARLQG  238 (277)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC---------CCHHHHHHHHHS
T ss_pred             -----------hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchh---hHHHHhhhhhhhcccc
Confidence                       57999999999999888865   589999999999998742110000000   000000000 000134


Q ss_pred             CcccHHHHHHHHHhhhcCCC--CCce-EEecCc
Q 023689          227 GAVPVKDVAKAQVLLFESPA--ASGR-YLCTNG  256 (278)
Q Consensus       227 ~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  256 (278)
                      .+.+++|+|+++++++....  ..|. +.+.++
T Consensus       239 r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG  271 (277)
T 3gvc_A          239 RMAAPEEMAGIVVFLLSDDASMITGTTQIADGG  271 (277)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCCHHHHHHHHHHHcCCccCCccCcEEEECCc
Confidence            57899999999999986543  3464 444443

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.95  E-value=1.1e-26  Score=187.71  Aligned_cols=217  Identities=16%  Similarity=0.121  Sum_probs=155.6

Q ss_pred             CccccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc-
Q 023689            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-   79 (278)
Q Consensus         1 m~~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-   79 (278)
                      |.+|.++++|++|||||+++||+++++.|.++|+ +|++..|+......          ...++++|++|+++++++++ 
T Consensus         3 m~dl~~L~GK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~----------~~~~~~~Dv~~~~~v~~~~~~   71 (261)
T 4h15_A            3 MIEFLNLRGKRALITAGTKGAGAATVSLFLELGA-QVLTTARARPEGLP----------EELFVEADLTTKEGCAIVAEA   71 (261)
T ss_dssp             CCCCCCCTTCEEEESCCSSHHHHHHHHHHHHTTC-EEEEEESSCCTTSC----------TTTEEECCTTSHHHHHHHHHH
T ss_pred             chhccCCCCCEEEEeccCcHHHHHHHHHHHHcCC-EEEEEECCchhCCC----------cEEEEEcCCCCHHHHHHHHHH
Confidence            4566789999999999999999999999999999 88888886543111          33478899999998888765 


Q ss_pred             ------CccEEEEecccCCC------CCCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCC
Q 023689           80 ------GCKGVFHVASPCTL------EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKG  143 (278)
Q Consensus        80 ------~~d~vi~~a~~~~~------~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~  143 (278)
                            ++|++|||||....      +...++|+..+++|+.++..+.+++    ++++-+++|++||..+..+.+..  
T Consensus        72 ~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~~~--  149 (261)
T 4h15_A           72 TRQRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLPES--  149 (261)
T ss_dssp             HHHHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTT--
T ss_pred             HHHHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCCCc--
Confidence                  57999999986432      2234578899999998887776655    55567899999998876554321  


Q ss_pred             ccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCC-----------CchhHHH
Q 023689          144 KVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPY-----------LNASCAV  209 (278)
Q Consensus       144 ~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~-----------~~~~~~~  209 (278)
                                       ...|+.||...+.+.+.++.+   +||++++|.||.|.++.....           .......
T Consensus       150 -----------------~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~  212 (261)
T 4h15_A          150 -----------------TTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKI  212 (261)
T ss_dssp             -----------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred             -----------------cHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHH
Confidence                             145788888887777777754   599999999999988742211           0011122


Q ss_pred             HHHHhhCCCCcccccccCcccHHHHHHHHHhhhcCCC--CCceEEe
Q 023689          210 LQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLC  253 (278)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~  253 (278)
                      ........|      ...+..++|+|++++++.....  -.|+.+.
T Consensus       213 ~~~~~~~~P------lgR~g~peevA~~v~fLaS~~a~~itG~~i~  252 (261)
T 4h15_A          213 IMDGLGGIP------LGRPAKPEEVANLIAFLASDRAASITGAEYT  252 (261)
T ss_dssp             HHHHTTCCT------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHhcCCC------CCCCcCHHHHHHHHHHHhCchhcCccCcEEE
Confidence            222223333      3457899999999999985433  3465443

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.95  E-value=5e-27  Score=192.97  Aligned_cols=223  Identities=13%  Similarity=0.044  Sum_probs=163.6

Q ss_pred             cccccCCceEEEeCcchh--hHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc-
Q 023689            3 SEAEKEEETVCVTGANGF--IGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-   79 (278)
Q Consensus         3 ~m~~~~~~~vlItGatG~--iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-   79 (278)
                      .|..+++|++|||||+|+  ||++++++|+++|+ .|++..|+. ..+.+..+..... ++.++.+|++|++++.++++ 
T Consensus        20 ~M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~-~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~   96 (280)
T 3nrc_A           20 HMGFLAGKKILITGLLSNKSIAYGIAKAMHREGA-ELAFTYVGQ-FKDRVEKLCAEFN-PAAVLPCDVISDQEIKDLFVE   96 (280)
T ss_dssp             --CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTC-EEEEEECTT-CHHHHHHHHGGGC-CSEEEECCTTCHHHHHHHHHH
T ss_pred             cccccCCCEEEEECCCCCCCHHHHHHHHHHHcCC-EEEEeeCch-HHHHHHHHHHhcC-CceEEEeecCCHHHHHHHHHH
Confidence            466677899999999955  99999999999999 898888876 2222222211112 68899999999999888875 


Q ss_pred             ------CccEEEEecccCCCC---------CCCCchhhhhhhHHhHHHHHHHHHHhc---CCCEEEEecceeeeecCCCC
Q 023689           80 ------GCKGVFHVASPCTLE---------DPVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGW  141 (278)
Q Consensus        80 ------~~d~vi~~a~~~~~~---------~~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~v~~Ss~~~~~~~~~~  141 (278)
                            ++|+|||+||.....         ...+.++..+++|+.++.++++++...   +.++||++||.++..+.+..
T Consensus        97 ~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  176 (280)
T 3nrc_A           97 LGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAMPSY  176 (280)
T ss_dssp             HHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSCCTTT
T ss_pred             HHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccCCCCc
Confidence                  469999999976431         334567789999999999999988553   35789999998776554332


Q ss_pred             CCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCC
Q 023689          142 KGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSK  218 (278)
Q Consensus       142 ~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~  218 (278)
                                          ..|+.+|.+.+.+.+.++.+   +|+++++++||.|.++...... .............+
T Consensus       177 --------------------~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~p  235 (280)
T 3nrc_A          177 --------------------NTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGIS-NFKKMLDYNAMVSP  235 (280)
T ss_dssp             --------------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCT-THHHHHHHHHHHST
T ss_pred             --------------------hhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCc-chHHHHHHHHhcCC
Confidence                                57999999999999888865   5899999999999998654432 12233333333333


Q ss_pred             CcccccccCcccHHHHHHHHHhhhcCCC--CCceE-EecC
Q 023689          219 DTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRY-LCTN  255 (278)
Q Consensus       219 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~-~~~~  255 (278)
                            ...+.+++|+|+++++++....  ..|.. .+.+
T Consensus       236 ------~~~~~~pedvA~~v~~l~s~~~~~~tG~~i~vdg  269 (280)
T 3nrc_A          236 ------LKKNVDIMEVGNTVAFLCSDMATGITGEVVHVDA  269 (280)
T ss_dssp             ------TCSCCCHHHHHHHHHHTTSGGGTTCCSCEEEEST
T ss_pred             ------CCCCCCHHHHHHHHHHHhCcccCCcCCcEEEECC
Confidence                  3457899999999999987543  34644 4443

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.95  E-value=2.5e-27  Score=197.40  Aligned_cols=221  Identities=16%  Similarity=0.203  Sum_probs=157.4

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCC---cc---cccCCCCCCCceEEEEccCCChhhHHHHhcCcc
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS---SH---LFALPGAGDANLRVFEADVLDSGAVSRAVEGCK   82 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~---~~---~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d   82 (278)
                      ||+||||||||+||+++++.|++.|+ .|++++|+....   +.   +..+.   ..+++++++|++|++++.++++++|
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~~~~~~~~~l~---~~~v~~v~~D~~d~~~l~~~~~~~d   79 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGH-PTFLLVRESTASSNSEKAQLLESFK---ASGANIVHGSIDDHASLVEAVKNVD   79 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCCCCTTTTHHHHHHHHHHH---TTTCEEECCCTTCHHHHHHHHHTCS
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCC-CEEEEECCcccccCHHHHHHHHHHH---hCCCEEEEeccCCHHHHHHHHcCCC
Confidence            57899999999999999999999998 899999976432   11   11110   1178999999999999999999999


Q ss_pred             EEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcC-CCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccC
Q 023689           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRK  161 (278)
Q Consensus        83 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  161 (278)
                      +|||+++...               +.++.+++++|++.+ +++||+ |+ .+.  .       .+|..+..+.     .
T Consensus        80 ~vi~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S~-~g~--~-------~~~~~~~~p~-----~  128 (308)
T 1qyc_A           80 VVISTVGSLQ---------------IESQVNIIKAIKEVGTVKRFFP-SE-FGN--D-------VDNVHAVEPA-----K  128 (308)
T ss_dssp             EEEECCCGGG---------------SGGGHHHHHHHHHHCCCSEEEC-SC-CSS--C-------TTSCCCCTTH-----H
T ss_pred             EEEECCcchh---------------hhhHHHHHHHHHhcCCCceEee-cc-ccc--C-------ccccccCCcc-----h
Confidence            9999997522               446789999999998 999984 54 211  1       1222222221     1


Q ss_pred             chhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCc-c--cccccCcccHHHHHHHH
Q 023689          162 KWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT-Q--EYHWLGAVPVKDVAKAQ  238 (278)
Q Consensus       162 ~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~i~~~D~a~~~  238 (278)
                      ..| .+|...|++++    +.+++++++||+.++|+.........    .....+.... .  ++..+++++++|+|+++
T Consensus       129 ~~y-~sK~~~e~~~~----~~~~~~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  199 (308)
T 1qyc_A          129 SVF-EVKAKVRRAIE----AEGIPYTYVSSNCFAGYFLRSLAQAG----LTAPPRDKVVILGDGNARVVFVKEEDIGTFT  199 (308)
T ss_dssp             HHH-HHHHHHHHHHH----HHTCCBEEEECCEEHHHHTTTTTCTT----CSSCCSSEEEEETTSCCEEEEECHHHHHHHH
T ss_pred             hHH-HHHHHHHHHHH----hcCCCeEEEEeceecccccccccccc----ccCCCCCceEEecCCCceEEEecHHHHHHHH
Confidence            468 99999998875    56899999999999886432211000    0000111111 1  34678999999999999


Q ss_pred             HhhhcCCCCCc-eE-Eec-CccccHHHHHHHHHHhCCC
Q 023689          239 VLLFESPAASG-RY-LCT-NGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       239 ~~~~~~~~~~~-~~-~~~-~~~~s~~e~~~~i~~~~~~  273 (278)
                      +.++.++...+ .+ +.+ ++.+|+.|+++.+.+.+++
T Consensus       200 ~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~  237 (308)
T 1qyc_A          200 IKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDK  237 (308)
T ss_dssp             HTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHTTS
T ss_pred             HHHHhCccccCeEEEEeCCCCccCHHHHHHHHHHHhCC
Confidence            99998765434 44 444 4689999999999999864

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.95  E-value=2.8e-27  Score=195.52  Aligned_cols=221  Identities=12%  Similarity=0.054  Sum_probs=159.9

Q ss_pred             cccccCCceEEEeCcchh--hHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc-
Q 023689            3 SEAEKEEETVCVTGANGF--IGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-   79 (278)
Q Consensus         3 ~m~~~~~~~vlItGatG~--iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-   79 (278)
                      .|..+++|++|||||+|+  ||++++++|.++|+ .|++..|+....+.+..+..... ++.++.+|++|+++++++++ 
T Consensus        25 ~~~~l~gk~~lVTGasg~~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~  102 (293)
T 3grk_A           25 QSGLLQGKRGLILGVANNRSIAWGIAKAAREAGA-ELAFTYQGDALKKRVEPLAEELG-AFVAGHCDVADAASIDAVFET  102 (293)
T ss_dssp             --CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTC-EEEEEECSHHHHHHHHHHHHHHT-CEEEEECCTTCHHHHHHHHHH
T ss_pred             ccccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcC-CceEEECCCCCHHHHHHHHHH
Confidence            345677899999999977  99999999999999 88888887432222222111111 68899999999999988876 


Q ss_pred             ------CccEEEEecccCCC--------CCCCCchhhhhhhHHhHHHHHHHHHHhc--CCCEEEEecceeeeecCCCCCC
Q 023689           80 ------GCKGVFHVASPCTL--------EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKG  143 (278)
Q Consensus        80 ------~~d~vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~  143 (278)
                            ++|++|||||....        +...++++..+++|+.++.++++++...  ..++||++||..+..+.+..  
T Consensus       103 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~--  180 (293)
T 3grk_A          103 LEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVMPNY--  180 (293)
T ss_dssp             HHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBCTTT--
T ss_pred             HHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCCCch--
Confidence                  68999999997641        2334567889999999999999998664  24689999998876654432  


Q ss_pred             ccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCc
Q 023689          144 KVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT  220 (278)
Q Consensus       144 ~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~  220 (278)
                                        ..|+.||.+.+.+.+.++.+   +|+++++++||.|.++....... ............|  
T Consensus       181 ------------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~p--  239 (293)
T 3grk_A          181 ------------------NVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGD-FRYILKWNEYNAP--  239 (293)
T ss_dssp             ------------------THHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CC-HHHHHHHHHHHST--
T ss_pred             ------------------HHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccc-hHHHHHHHHhcCC--
Confidence                              57999999999999888875   48999999999999986543321 2223333333333  


Q ss_pred             ccccccCcccHHHHHHHHHhhhcCCC--CCceEE
Q 023689          221 QEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYL  252 (278)
Q Consensus       221 ~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~  252 (278)
                          ...+.+++|+|+++++++....  ..|..+
T Consensus       240 ----~~r~~~pedvA~~v~~L~s~~~~~itG~~i  269 (293)
T 3grk_A          240 ----LRRTVTIDEVGDVGLYFLSDLSRSVTGEVH  269 (293)
T ss_dssp             ----TSSCCCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             ----CCCCCCHHHHHHHHHHHcCccccCCcceEE
Confidence                3557899999999999987543  346543

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.95  E-value=1.3e-27  Score=195.67  Aligned_cols=219  Identities=17%  Similarity=0.119  Sum_probs=157.9

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCC-Cccccc-CCCCCCCceEEEEccCCChhhHHHHhc----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~-~~~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~----   79 (278)
                      ++++|++|||||+|+||++++++|+++|+ .|++..|+... .+.+.. +.... .++.++++|++|++++.++++    
T Consensus        26 ~l~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~  103 (271)
T 4iin_A           26 QFTGKNVLITGASKGIGAEIAKTLASMGL-KVWINYRSNAEVADALKNELEEKG-YKAAVIKFDAASESDFIEAIQTIVQ  103 (271)
T ss_dssp             CCSCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcC-CceEEEECCCCCHHHHHHHHHHHHH
Confidence            46789999999999999999999999999 88888885432 222211 11111 278999999999999888876    


Q ss_pred             ---CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccC
Q 023689           80 ---GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (278)
Q Consensus        80 ---~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E  148 (278)
                         ++|+|||+||.....    ...++++..+++|+.++.++++++    ++.+.+++|++||..+..+.+..       
T Consensus       104 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------  176 (271)
T 4iin_A          104 SDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQ-------  176 (271)
T ss_dssp             HHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTC-------
T ss_pred             hcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCCCc-------
Confidence               689999999976542    233467889999999998877776    44466899999998887654432       


Q ss_pred             CCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccc
Q 023689          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (278)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (278)
                                   ..|+.+|.+.+.+.+.++.+   .++++++++||.+.++......   ...........      ..
T Consensus       177 -------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~---~~~~~~~~~~~------~~  234 (271)
T 4iin_A          177 -------------TNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLK---DELKADYVKNI------PL  234 (271)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC---------------CGGGC------TT
T ss_pred             -------------hHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhc---HHHHHHHHhcC------Cc
Confidence                         57999999999999988876   5899999999999988643321   11111111111      24


Q ss_pred             cCcccHHHHHHHHHhhhcCCC--CCceE-EecC
Q 023689          226 LGAVPVKDVAKAQVLLFESPA--ASGRY-LCTN  255 (278)
Q Consensus       226 ~~~i~~~D~a~~~~~~~~~~~--~~~~~-~~~~  255 (278)
                      ..+.+++|+|+++++++....  ..|.. .+.+
T Consensus       235 ~~~~~p~dvA~~i~~l~s~~~~~itG~~i~vdG  267 (271)
T 4iin_A          235 NRLGSAKEVAEAVAFLLSDHSSYITGETLKVNG  267 (271)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCcCHHHHHHHHHHHhCCCcCCCcCCEEEeCC
Confidence            568899999999999987643  34654 4443

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.95  E-value=3e-27  Score=191.41  Aligned_cols=225  Identities=17%  Similarity=0.148  Sum_probs=161.9

Q ss_pred             ccc-ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccc-ccCCCCCCCceEEEEccCCChhhHHHHhc-
Q 023689            3 SEA-EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL-FALPGAGDANLRVFEADVLDSGAVSRAVE-   79 (278)
Q Consensus         3 ~m~-~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~-~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-   79 (278)
                      .|+ ++++|++|||||+++||+++++.|.++|+ .|++..|+.+..+.. .++.   . ++..+++|++|+++++++++ 
T Consensus        22 ~Ms~rL~gKvalVTGas~GIG~aiA~~la~~Ga-~V~i~~r~~~~l~~~~~~~g---~-~~~~~~~Dv~~~~~v~~~~~~   96 (273)
T 4fgs_A           22 SMTQRLNAKIAVITGATSGIGLAAAKRFVAEGA-RVFITGRRKDVLDAAIAEIG---G-GAVGIQADSANLAELDRLYEK   96 (273)
T ss_dssp             ---CTTTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHC---T-TCEEEECCTTCHHHHHHHHHH
T ss_pred             hhcchhCCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcC---C-CeEEEEecCCCHHHHHHHHHH
Confidence            354 47899999999999999999999999999 888888876554332 2221   1 78899999999999888875 


Q ss_pred             ------CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHHHhc--CCCEEEEecceeeeecCCCCCCcccc
Q 023689           80 ------GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFD  147 (278)
Q Consensus        80 ------~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~  147 (278)
                            ++|++|||||....    +...++|+..+++|+.++..+.+++.+.  .-+++|++||..+..+.+..      
T Consensus        97 ~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~~~~------  170 (273)
T 4fgs_A           97 VKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGTPAF------  170 (273)
T ss_dssp             HHHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCCTTC------
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCCCCc------
Confidence                  57999999997554    2344678999999999999999988554  23579999998887665543      


Q ss_pred             CCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCc----hhHHHHHHHhhCCCCc
Q 023689          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN----ASCAVLQQLLQGSKDT  220 (278)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~----~~~~~~~~~~~~~~~~  220 (278)
                                    ..|+.+|.....+.+.++.+   +||++++|.||.|.++.......    ....+...+....|  
T Consensus       171 --------------~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~P--  234 (273)
T 4fgs_A          171 --------------SVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVP--  234 (273)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHST--
T ss_pred             --------------hHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCC--
Confidence                          46888888887777777754   48999999999999886443311    11223334444444  


Q ss_pred             ccccccCcccHHHHHHHHHhhhcCCC--CCceEEecCccc
Q 023689          221 QEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLCTNGIY  258 (278)
Q Consensus       221 ~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~~~~  258 (278)
                          ...+..++|+|++++++.....  -.|+.+..++..
T Consensus       235 ----lgR~g~peeiA~~v~FLaSd~a~~iTG~~i~VDGG~  270 (273)
T 4fgs_A          235 ----MGRVGRAEEVAAAALFLASDDSSFVTGAELFVDGGS  270 (273)
T ss_dssp             ----TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             ----CCCCcCHHHHHHHHHHHhCchhcCccCCeEeECcCh
Confidence                3457789999999999986543  357665554443

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.95  E-value=6e-27  Score=194.18  Aligned_cols=220  Identities=19%  Similarity=0.100  Sum_probs=157.6

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCC---------ccc----ccCCCCCCCceEEEEccCCChh
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS---------SHL----FALPGAGDANLRVFEADVLDSG   72 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~---------~~~----~~~~~~~~~~v~~~~~Dl~d~~   72 (278)
                      .+++|++|||||+|+||++++++|+++|+ .|++++|++...         +.+    ..+...+ .++.++++|++|++
T Consensus        25 ~l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~  102 (299)
T 3t7c_A           25 KVEGKVAFITGAARGQGRSHAITLAREGA-DIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALG-RRIIASQVDVRDFD  102 (299)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTT-CCEEEEECCTTCHH
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEecccccccccccccCHHHHHHHHHHHHhcC-CceEEEECCCCCHH
Confidence            56789999999999999999999999999 888888763211         111    1111112 27899999999999


Q ss_pred             hHHHHhc-------CccEEEEecccCCCCC-----CCCchhhhhhhHHhHHHHHHHHHHhc-----CCCEEEEecceeee
Q 023689           73 AVSRAVE-------GCKGVFHVASPCTLED-----PVDPEKELILPAVQGTLNVLEAAKRF-----GVRRVVVTSSISAI  135 (278)
Q Consensus        73 ~~~~~~~-------~~d~vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~ll~~~~~~-----~~~~~v~~Ss~~~~  135 (278)
                      +++++++       ++|++|||||......     ..++++..+++|+.++.++++++...     +.++||++||..++
T Consensus       103 ~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~  182 (299)
T 3t7c_A          103 AMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGL  182 (299)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGT
T ss_pred             HHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhc
Confidence            9888876       6899999999755422     33567899999999999999887432     35789999998876


Q ss_pred             ecCCCCCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCC---------
Q 023689          136 VPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYL---------  203 (278)
Q Consensus       136 ~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~---------  203 (278)
                      .+.+..                    ..|+.+|.+.+.+.+.++.+.   |+++++++||.|.++......         
T Consensus       183 ~~~~~~--------------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~  242 (299)
T 3t7c_A          183 RGAENI--------------------GNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDL  242 (299)
T ss_dssp             SCCTTC--------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTS
T ss_pred             cCCCCc--------------------chHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhh
Confidence            554432                    579999999999998888764   899999999999998754310         


Q ss_pred             --chhHHHHHHHhhCCCCcccccccCcccHHHHHHHHHhhhcCCC--CCceEE
Q 023689          204 --NASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYL  252 (278)
Q Consensus       204 --~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~  252 (278)
                        ...............     ....+.+++|+|+++++++....  ..|..+
T Consensus       243 ~~~~~~~~~~~~~~~~~-----~p~r~~~pedvA~~v~fL~s~~a~~itG~~i  290 (299)
T 3t7c_A          243 ENPTVEDFQVASRQMHV-----LPIPYVEPADISNAILFLVSDDARYITGVSL  290 (299)
T ss_dssp             SSCCHHHHHHHHHHHSS-----SSCSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             ccchhhHHHHHhhhhcc-----cCcCCCCHHHHHHHHHHHhCcccccCcCCEE
Confidence              000000000000000     01457899999999999987543  346543

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.95  E-value=1.2e-26  Score=187.69  Aligned_cols=206  Identities=17%  Similarity=0.189  Sum_probs=150.6

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc------
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~------   79 (278)
                      .+++|++|||||+|+||++++++|+++|+ .|++..|+.+..+           .+.++++|++|+++++++++      
T Consensus        18 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~-----------~~~~~~~Dl~d~~~v~~~~~~~~~~~   85 (253)
T 2nm0_A           18 SHMSRSVLVTGGNRGIGLAIARAFADAGD-KVAITYRSGEPPE-----------GFLAVKCDITDTEQVEQAYKEIEETH   85 (253)
T ss_dssp             --CCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCT-----------TSEEEECCTTSHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHhhc-----------cceEEEecCCCHHHHHHHHHHHHHHc
Confidence            45678999999999999999999999999 8988888754321           47789999999999888876      


Q ss_pred             -CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHHH----hcCCCEEEEecceeeeecCCCCCCccccCCC
Q 023689           80 -GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (278)
Q Consensus        80 -~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~  150 (278)
                       ++|+|||+||....    +...++++..+++|+.++.++++++.    +++.++||++||..+..+.+.          
T Consensus        86 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~----------  155 (253)
T 2nm0_A           86 GPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAG----------  155 (253)
T ss_dssp             CSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHHH----------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCC----------
Confidence             46999999997543    22456788999999999998888664    346789999999766543211          


Q ss_pred             CCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccC
Q 023689          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (278)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (278)
                                ...|+.+|.+.+.+.+.++.+   +|+++++++||.+.++......   ...........|      ...
T Consensus       156 ----------~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~---~~~~~~~~~~~p------~~~  216 (253)
T 2nm0_A          156 ----------QANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLT---DEQRANIVSQVP------LGR  216 (253)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC------------CHHHHHTTCT------TCS
T ss_pred             ----------cHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcC---HHHHHHHHhcCC------CCC
Confidence                      157999999999999888865   4899999999999887643211   111112222222      245


Q ss_pred             cccHHHHHHHHHhhhcCCC--CCceEE
Q 023689          228 AVPVKDVAKAQVLLFESPA--ASGRYL  252 (278)
Q Consensus       228 ~i~~~D~a~~~~~~~~~~~--~~~~~~  252 (278)
                      +++++|+|+++++++....  ..|..+
T Consensus       217 ~~~p~dvA~~i~~l~s~~~~~~tG~~i  243 (253)
T 2nm0_A          217 YARPEEIAATVRFLASDDASYITGAVI  243 (253)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             CcCHHHHHHHHHHHhCccccCCcCcEE
Confidence            7899999999999987643  346543

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.95  E-value=1.1e-27  Score=195.66  Aligned_cols=225  Identities=16%  Similarity=0.120  Sum_probs=155.9

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccc-ccCCCC-CCCceEEEEccCCChhhHHHHhc-----
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL-FALPGA-GDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~-~~~~~~-~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      +++|++|||||+|+||++++++|+++|+ .|++..|+.+..... ..+... ...++.++.+|++|++++.++++     
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDH   83 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHH
Confidence            3568999999999999999999999999 898888875432211 111110 11268899999999999888876     


Q ss_pred             --CccEEEEecccCCCCCCCCchhhhhhhHHhHHHH----HHHHHHhcC---CCEEEEecceeeeecCCCCCCccccCCC
Q 023689           80 --GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLN----VLEAAKRFG---VRRVVVTSSISAIVPNPGWKGKVFDETS  150 (278)
Q Consensus        80 --~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~----ll~~~~~~~---~~~~v~~Ss~~~~~~~~~~~~~~~~E~~  150 (278)
                        ++|+|||+||...    .++++..+++|+.++..    +++++++++   .++||++||..++.+.+..         
T Consensus        84 ~g~id~lv~~Ag~~~----~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  150 (267)
T 2gdz_A           84 FGRLDILVNNAGVNN----EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQ---------  150 (267)
T ss_dssp             HSCCCEEEECCCCCC----SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTC---------
T ss_pred             cCCCCEEEECCCCCC----hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCCC---------
Confidence              4799999999754    35688999999886554    555555543   5789999998775543321         


Q ss_pred             CCchhhhhccCchhhhHHHHHHHHHHHHH-----HhcCCceEEEecceeeCCCCCCCCchh-H----HHHHHHhhCCCCc
Q 023689          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFA-----EKHGVDVVAIHPATCLGPLMQPYLNAS-C----AVLQQLLQGSKDT  220 (278)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~-----~~~~~~~~~lrp~~i~g~~~~~~~~~~-~----~~~~~~~~~~~~~  220 (278)
                                 ..|+.+|...+.+.+.++     ..+|+++++++||.+.++......... .    ........     
T Consensus       151 -----------~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-----  214 (267)
T 2gdz_A          151 -----------PVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKD-----  214 (267)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHH-----
T ss_pred             -----------chHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccccccchhhhHHHHHHH-----
Confidence                       469999999998887642     246999999999999887422110000 0    00000000     


Q ss_pred             ccccccCcccHHHHHHHHHhhhcCCCCCc-eEEe-cCccccHHH
Q 023689          221 QEYHWLGAVPVKDVAKAQVLLFESPAASG-RYLC-TNGIYQFGD  262 (278)
Q Consensus       221 ~~~~~~~~i~~~D~a~~~~~~~~~~~~~~-~~~~-~~~~~s~~e  262 (278)
                       +.....+++++|+|++++.++......| .+.+ +++.+++.|
T Consensus       215 -~~~~~~~~~~~dvA~~v~~l~s~~~~~G~~~~v~gg~~~~~~~  257 (267)
T 2gdz_A          215 -MIKYYGILDPPLIANGLITLIEDDALNGAIMKITTSKGIHFQD  257 (267)
T ss_dssp             -HHHHHCCBCHHHHHHHHHHHHHCTTCSSCEEEEETTTEEEECC
T ss_pred             -HhccccCCCHHHHHHHHHHHhcCcCCCCcEEEecCCCcccccC
Confidence             0113457899999999999998766566 4544 456666655

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.95  E-value=3.4e-27  Score=193.90  Aligned_cols=217  Identities=16%  Similarity=0.171  Sum_probs=153.2

Q ss_pred             cccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCCCC-CCceEEEEccCCChhhHHHHhc-
Q 023689            3 SEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAG-DANLRVFEADVLDSGAVSRAVE-   79 (278)
Q Consensus         3 ~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~~~-~~~v~~~~~Dl~d~~~~~~~~~-   79 (278)
                      .|..+++|++|||||+|+||++++++|+++|+ .|+++.|+.+..+.+.. +.... ...+.++.+|++|++++.++++ 
T Consensus        26 ~m~~l~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  104 (279)
T 1xg5_A           26 GMERWRDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSA  104 (279)
T ss_dssp             TCGGGTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHH
T ss_pred             cccccCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHH
Confidence            46667789999999999999999999999999 89999887544332211 11000 1168899999999999888876 


Q ss_pred             ------CccEEEEecccCCCCC----CCCchhhhhhhHHhH----HHHHHHHHHhcCC--CEEEEecceeeeecCCCCCC
Q 023689           80 ------GCKGVFHVASPCTLED----PVDPEKELILPAVQG----TLNVLEAAKRFGV--RRVVVTSSISAIVPNPGWKG  143 (278)
Q Consensus        80 ------~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~----~~~ll~~~~~~~~--~~~v~~Ss~~~~~~~~~~~~  143 (278)
                            ++|+|||+||......    ..+.++..+++|+.+    ++.+++.+++.+.  ++||++||..++...+.   
T Consensus       105 ~~~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~---  181 (279)
T 1xg5_A          105 IRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPL---  181 (279)
T ss_dssp             HHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSC---
T ss_pred             HHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCC---
Confidence                  7899999999754321    234678889999999    6777777777775  79999999766421111   


Q ss_pred             ccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh-----cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCC
Q 023689          144 KVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK-----HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSK  218 (278)
Q Consensus       144 ~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-----~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~  218 (278)
                                +     ....|+.+|.+.+.+.+.++.+     .++++++++||.+.++................   . 
T Consensus       182 ----------~-----~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~---~-  242 (279)
T 1xg5_A          182 ----------S-----VTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAAT---Y-  242 (279)
T ss_dssp             ----------G-----GGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHH---H-
T ss_pred             ----------C-----CCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccChhHHhhh---c-
Confidence                      1     1157999999999888877754     47999999999998875211000000111110   0 


Q ss_pred             CcccccccCcccHHHHHHHHHhhhcCCCC
Q 023689          219 DTQEYHWLGAVPVKDVAKAQVLLFESPAA  247 (278)
Q Consensus       219 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  247 (278)
                           ....+++++|+|+++++++..+..
T Consensus       243 -----~~~~~~~~~dvA~~i~~l~~~~~~  266 (279)
T 1xg5_A          243 -----EQMKCLKPEDVAEAVIYVLSTPAH  266 (279)
T ss_dssp             -----C---CBCHHHHHHHHHHHHHSCTT
T ss_pred             -----ccccCCCHHHHHHHHHHHhcCCcc
Confidence                 123478999999999999987543

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.95  E-value=1.9e-27  Score=193.25  Aligned_cols=215  Identities=18%  Similarity=0.191  Sum_probs=155.2

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCC--Cccc-ccCCCCCCCceEEEEccCCChhhHHHHhc------
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD--SSHL-FALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~--~~~~-~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~------   79 (278)
                      +|++|||||+|+||++++++|+++|+ .|++..|+.+.  .+.. ..+.... .++.++++|++|++++.++++      
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~   79 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGF-DIAVADLPQQEEQAAETIKLIEAAD-QKAVFVGLDVTDKANFDSAIDEAAEKL   79 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEECGGGHHHHHHHHHHHHTTT-CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            58999999999999999999999999 88888887654  2221 1111112 278999999999999888876      


Q ss_pred             -CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHh----cCC-CEEEEecceeeeecCCCCCCccccCC
Q 023689           80 -GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FGV-RRVVVTSSISAIVPNPGWKGKVFDET  149 (278)
Q Consensus        80 -~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~-~~~v~~Ss~~~~~~~~~~~~~~~~E~  149 (278)
                       ++|++||+||.....    ...++++..+++|+.++.++++++.+    ++. ++||++||..++.+.+..        
T Consensus        80 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------  151 (258)
T 3a28_C           80 GGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPIL--------  151 (258)
T ss_dssp             TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCTTC--------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCCCc--------
Confidence             789999999975432    23356788999999999998888754    365 799999998776543322        


Q ss_pred             CCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCC--------chhHHHHHHHhhCCC
Q 023689          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYL--------NASCAVLQQLLQGSK  218 (278)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~--------~~~~~~~~~~~~~~~  218 (278)
                                  ..|+.+|...+.+.+.++.+   +|+++++++||.+.++......        ..............|
T Consensus       152 ------------~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  219 (258)
T 3a28_C          152 ------------SAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIA  219 (258)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTCT
T ss_pred             ------------hhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhcCC
Confidence                        57999999999999888865   4899999999999887422100        000011112222112


Q ss_pred             CcccccccCcccHHHHHHHHHhhhcCCC--CCceE
Q 023689          219 DTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRY  251 (278)
Q Consensus       219 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~  251 (278)
                            ...+.+++|+|+++++++....  ..|..
T Consensus       220 ------~~r~~~p~dvA~~v~~l~s~~~~~~tG~~  248 (258)
T 3a28_C          220 ------LGRPSVPEDVAGLVSFLASENSNYVTGQV  248 (258)
T ss_dssp             ------TSSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             ------CCCccCHHHHHHHHHHHhCcccCCCCCCE
Confidence                  3457899999999999986542  34644

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.95  E-value=3.4e-27  Score=190.20  Aligned_cols=200  Identities=15%  Similarity=0.104  Sum_probs=152.3

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCC------eEEEEecCCCCCccccc-CCCCCCCceEEEEccCCChhhHHHHhc--
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYT------SINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE--   79 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~------~v~~~~r~~~~~~~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~--   79 (278)
                      +|++|||||+|+||++++++|+++|+.      .|++..|+.+..+.+.. +.... .++.++.+|++|++++.++++  
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~   80 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEG-ALTDTITADISDMADVRRLTTHI   80 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTT-CEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccC-CeeeEEEecCCCHHHHHHHHHHH
Confidence            579999999999999999999999984      68888886543332211 11111 278999999999999888876  


Q ss_pred             -----CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHH----hcCCCEEEEecceeeeecCCCCCCccc
Q 023689           80 -----GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVF  146 (278)
Q Consensus        80 -----~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~  146 (278)
                           ++|+|||+||.....    ...+.++..+++|+.++.++++++.    +.+.++||++||..++.+.+.      
T Consensus        81 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~------  154 (244)
T 2bd0_A           81 VERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRH------  154 (244)
T ss_dssp             HHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT------
T ss_pred             HHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCCCC------
Confidence                 689999999975432    2234678889999999999888874    346789999999777554332      


Q ss_pred             cCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccc
Q 023689          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (278)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (278)
                                    ...|+.+|.+.+.+.+.++.+   +|++++++|||.++|+.......            ..     
T Consensus       155 --------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~------------~~-----  203 (244)
T 2bd0_A          155 --------------SSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDD------------EM-----  203 (244)
T ss_dssp             --------------CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCS------------TT-----
T ss_pred             --------------CchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhccc------------cc-----
Confidence                          157999999999998877753   58999999999999987543210            00     


Q ss_pred             cccCcccHHHHHHHHHhhhcCCCC
Q 023689          224 HWLGAVPVKDVAKAQVLLFESPAA  247 (278)
Q Consensus       224 ~~~~~i~~~D~a~~~~~~~~~~~~  247 (278)
                       ...+++++|+|++++.++..+..
T Consensus       204 -~~~~~~~~dva~~~~~l~~~~~~  226 (244)
T 2bd0_A          204 -QALMMMPEDIAAPVVQAYLQPSR  226 (244)
T ss_dssp             -GGGSBCHHHHHHHHHHHHTSCTT
T ss_pred             -cccCCCHHHHHHHHHHHHhCCcc
Confidence             13678999999999999976543

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.95  E-value=3.9e-27  Score=191.24  Aligned_cols=219  Identities=16%  Similarity=0.141  Sum_probs=158.6

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEe-cCCCCCccc-ccCCCCCCCceEEEEccCCChhhHHHHhc----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATV-FPGSDSSHL-FALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~-r~~~~~~~~-~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~----   79 (278)
                      ..++|+||||||+|+||++++++|+++|+ .|++.. |+.+..... ..+.... .++.++.+|++|.++++++++    
T Consensus        10 ~~~~k~vlITGas~giG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~   87 (256)
T 3ezl_A           10 VMSQRIAYVTGGMGGIGTSICQRLHKDGF-RVVAGCGPNSPRRVKWLEDQKALG-FDFYASEGNVGDWDSTKQAFDKVKA   87 (256)
T ss_dssp             ---CEEEEETTTTSHHHHHHHHHHHHTTE-EEEEEECTTCSSHHHHHHHHHHTT-CCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcC-CeeEEEecCCCCHHHHHHHHHHHHH
Confidence            34578999999999999999999999999 777776 444332221 1111111 278899999999999888876    


Q ss_pred             ---CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccC
Q 023689           80 ---GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (278)
Q Consensus        80 ---~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E  148 (278)
                         ++|+|||+||.....    ...++++..+++|+.++.++++++    ++.+.++||++||..+..+.+..       
T Consensus        88 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------  160 (256)
T 3ezl_A           88 EVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQ-------  160 (256)
T ss_dssp             HTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCSCC-------
T ss_pred             hcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCCCC-------
Confidence               679999999976532    233567889999999987776665    55667899999998877654432       


Q ss_pred             CCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccc
Q 023689          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (278)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (278)
                                   ..|+.+|.+.+.+.+.++.+   .|+++++++||.+.++.....   .......+....+      .
T Consensus       161 -------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~~------~  218 (256)
T 3ezl_A          161 -------------TNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAI---RPDVLEKIVATIP------V  218 (256)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS---CHHHHHHHHHHST------T
T ss_pred             -------------cccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCcccccc---CHHHHHHHHhcCC------C
Confidence                         57999999999988888875   589999999999998764332   2233334333333      3


Q ss_pred             cCcccHHHHHHHHHhhhcCCC--CCce-EEecC
Q 023689          226 LGAVPVKDVAKAQVLLFESPA--ASGR-YLCTN  255 (278)
Q Consensus       226 ~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~  255 (278)
                      ..+.+++|+|+++++++....  ..|. +.+.+
T Consensus       219 ~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdg  251 (256)
T 3ezl_A          219 RRLGSPDEIGSIVAWLASEESGFSTGADFSLNG  251 (256)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCcCHHHHHHHHHHHhCCcccCCcCcEEEECC
Confidence            567899999999999986533  3464 44443

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.95  E-value=7.5e-27  Score=195.07  Aligned_cols=227  Identities=17%  Similarity=0.127  Sum_probs=158.7

Q ss_pred             cccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCC---------cccc----cCCCCCCCceEEEEccCC
Q 023689            3 SEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS---------SHLF----ALPGAGDANLRVFEADVL   69 (278)
Q Consensus         3 ~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~---------~~~~----~~~~~~~~~v~~~~~Dl~   69 (278)
                      .|..+++|++|||||+|+||+++++.|+++|+ .|++++|+....         +.+.    .+.... .++.++++|++
T Consensus        40 ~m~~l~gk~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~  117 (317)
T 3oec_A           40 RMNRLQGKVAFITGAARGQGRTHAVRLAQDGA-DIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQG-RRIIARQADVR  117 (317)
T ss_dssp             --CTTTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTT-CCEEEEECCTT
T ss_pred             hhhccCCCEEEEeCCCcHHHHHHHHHHHHCCC-eEEEEecccccccccccccCHHHHHHHHHHHHhcC-CeEEEEECCCC
Confidence            36677889999999999999999999999999 888887753211         1110    011111 27899999999


Q ss_pred             ChhhHHHHhc-------CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHHHh----cC-CCEEEEeccee
Q 023689           70 DSGAVSRAVE-------GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKR----FG-VRRVVVTSSIS  133 (278)
Q Consensus        70 d~~~~~~~~~-------~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~----~~-~~~~v~~Ss~~  133 (278)
                      |+++++++++       ++|++|||||....    +...++++..+++|+.++.++++++..    ++ .++||++||..
T Consensus       118 d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~  197 (317)
T 3oec_A          118 DLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTV  197 (317)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGG
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHH
Confidence            9999888876       68999999997653    223456788999999999998887733    33 46899999988


Q ss_pred             eeecCCCCCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCC-------
Q 023689          134 AIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYL-------  203 (278)
Q Consensus       134 ~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~-------  203 (278)
                      ++.+.++.                    ..|+.+|.+.+.+.+.++.+   +|+++++++||.|.++......       
T Consensus       198 ~~~~~~~~--------------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~  257 (317)
T 3oec_A          198 GLRGAPGQ--------------------SHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLP  257 (317)
T ss_dssp             GSSCCTTB--------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCT
T ss_pred             hcCCCCCC--------------------cchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhh
Confidence            87654432                    57999999999999988876   4899999999999987532110       


Q ss_pred             ---chhHHHHHHHhhCCCCcccccccCcccHHHHHHHHHhhhcCCC--CCceE-EecC
Q 023689          204 ---NASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRY-LCTN  255 (278)
Q Consensus       204 ---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~-~~~~  255 (278)
                         .....-........    ......+++++|+|+++++++....  ..|.. .+.+
T Consensus       258 ~~~~~~~~~~~~~~~~~----~~~p~~~~~pedvA~av~fL~s~~a~~itG~~i~vdG  311 (317)
T 3oec_A          258 HLENPTREDAAELFSQL----TLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDG  311 (317)
T ss_dssp             TCSSCCHHHHHHHHTTT----CSSSSSSBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             hccccchhHHHHHHhhh----ccCCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECc
Confidence               00000001111111    0112678899999999999986543  34644 4443

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.95  E-value=5.6e-27  Score=191.83  Aligned_cols=230  Identities=14%  Similarity=0.072  Sum_probs=164.9

Q ss_pred             cccCCceEEEeCcc--hhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc---
Q 023689            5 AEKEEETVCVTGAN--GFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---   79 (278)
Q Consensus         5 ~~~~~~~vlItGat--G~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---   79 (278)
                      ..+++|+||||||+  |+||++++++|+++|+ .|++..|+....+.+..+..... ++.++.+|++|++++.++++   
T Consensus        10 ~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~   87 (271)
T 3ek2_A           10 GFLDGKRILLTGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFG-SELVFPCDVADDAQIDALFASLK   87 (271)
T ss_dssp             CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHHcCC-CEEEEecchhhHHHHHHHHHHcC-CcEEEECCCCCHHHHHHHHHHHH
Confidence            45678999999999  9999999999999999 89888887543333332211112 57899999999999988876   


Q ss_pred             ----CccEEEEecccCCC--------C-CCCCchhhhhhhHHhHHHHHHHHHHhc--CCCEEEEecceeeeecCCCCCCc
Q 023689           80 ----GCKGVFHVASPCTL--------E-DPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGK  144 (278)
Q Consensus        80 ----~~d~vi~~a~~~~~--------~-~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~  144 (278)
                          ++|++||+||....        + ...++++..+++|+.++.++++++...  ..+++|++||.++..+.+..   
T Consensus        88 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~---  164 (271)
T 3ek2_A           88 THWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAIPNY---  164 (271)
T ss_dssp             HHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTT---
T ss_pred             HHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccCCCCc---
Confidence                57999999997542        1 334567889999999999999999765  23589999998876554432   


Q ss_pred             cccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcc
Q 023689          145 VFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ  221 (278)
Q Consensus       145 ~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~  221 (278)
                                       ..|+.+|.+.+.+.+.++.+.   |+++++++||.|.++..... ..............+   
T Consensus       165 -----------------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~~---  223 (271)
T 3ek2_A          165 -----------------NTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGI-KSFGKILDFVESNSP---  223 (271)
T ss_dssp             -----------------THHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCC-HHHHHHHHHHHHHST---
T ss_pred             -----------------cchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcc-cchHHHHHHHHhcCC---
Confidence                             579999999999998888754   89999999999999875443 122233333333333   


Q ss_pred             cccccCcccHHHHHHHHHhhhcCCC--CCce-EEec-CccccHHHH
Q 023689          222 EYHWLGAVPVKDVAKAQVLLFESPA--ASGR-YLCT-NGIYQFGDF  263 (278)
Q Consensus       222 ~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~-~~~~s~~e~  263 (278)
                         ...+.+++|+|+++++++....  ..|. +.+. +...++.++
T Consensus       224 ---~~~~~~pedva~~i~~l~s~~~~~~tG~~i~vdgG~~~~~~~~  266 (271)
T 3ek2_A          224 ---LKRNVTIEQVGNAGAFLLSDLASGVTAEVMHVDSGFNAVVGGM  266 (271)
T ss_dssp             ---TSSCCCHHHHHHHHHHHHSGGGTTCCSEEEEESTTGGGBCCCC
T ss_pred             ---cCCCCCHHHHHHHHHHHcCcccCCeeeeEEEECCCeeeehhhh
Confidence               3457899999999999987533  3464 4444 334454444

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.95  E-value=1.9e-26  Score=185.89  Aligned_cols=210  Identities=19%  Similarity=0.168  Sum_probs=155.3

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc-------
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------   79 (278)
                      +++|++|||||+|+||++++++|+++|+ .|++..|+.+..+......     ++.++.+|++|+++++++++       
T Consensus         3 l~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~~~g   76 (245)
T 1uls_A            3 LKDKAVLITGAAHGIGRATLELFAKEGA-RLVACDIEEGPLREAAEAV-----GAHPVVMDVADPASVERGFAEALAHLG   76 (245)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTT-----TCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHc-----CCEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            5678999999999999999999999999 8988888764433322211     37889999999999888776       


Q ss_pred             CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHh----cCCCEEEEecceeeeecCCCCCCccccCCCC
Q 023689           80 GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (278)
Q Consensus        80 ~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~  151 (278)
                      ++|+|||+||.....    ...++++..+++|+.++.++++++.+    ++.++||++||.. .++.+..          
T Consensus        77 ~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~~~~~~----------  145 (245)
T 1uls_A           77 RLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGNLGQ----------  145 (245)
T ss_dssp             SCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCCTTC----------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hcCCCCc----------
Confidence            489999999975431    22346788899999999998887744    4568999999977 5543332          


Q ss_pred             CchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCc
Q 023689          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (278)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (278)
                                ..|+.+|...+.+.+.++.+   +|+++++++||.+.++.....   ............|      ...+
T Consensus       146 ----------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~p------~~~~  206 (245)
T 1uls_A          146 ----------ANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKV---PEKVREKAIAATP------LGRA  206 (245)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSS---CHHHHHHHHHTCT------TCSC
T ss_pred             ----------hhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhc---CHHHHHHHHhhCC------CCCC
Confidence                      46999999888888777754   489999999999999865432   1122223322222      2347


Q ss_pred             ccHHHHHHHHHhhhcCCC--CCceEE
Q 023689          229 VPVKDVAKAQVLLFESPA--ASGRYL  252 (278)
Q Consensus       229 i~~~D~a~~~~~~~~~~~--~~~~~~  252 (278)
                      ++++|+|+++++++....  ..|..+
T Consensus       207 ~~~~dvA~~v~~l~s~~~~~~tG~~~  232 (245)
T 1uls_A          207 GKPLEVAYAALFLLSDESSFITGQVL  232 (245)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             cCHHHHHHHHHHHhCchhcCCcCCEE
Confidence            899999999999987543  346543

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.95  E-value=2.4e-27  Score=192.88  Aligned_cols=209  Identities=18%  Similarity=0.158  Sum_probs=149.7

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCCCCCCceEEEEccCCChhhHHHHhc-------
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------   79 (278)
                      ++|++|||||+|+||++++++|.++|+ .|++..|+.+..+.+.. +.... .++.++.+|++|++++.++++       
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   80 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAGA-KILLGARRQARIEAIATEIRDAG-GTALAQVLDVTDRHSVAAFAQAAVDTWG   80 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTT-CEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            468999999999999999999999999 89888887654333221 11111 278899999999999888875       


Q ss_pred             CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccCCCC
Q 023689           80 GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (278)
Q Consensus        80 ~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~  151 (278)
                      ++|++|||||.....    ...+.++..+++|+.++.++.+++    ++++.++||++||..++.+.+..          
T Consensus        81 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~----------  150 (264)
T 3tfo_A           81 RIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTA----------  150 (264)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTC----------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCCC----------
Confidence            689999999976542    233567889999999998877766    44566899999998886654432          


Q ss_pred             CchhhhhccCchhhhHHHHHHHHHHHHHHhc-CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCccc
Q 023689          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH-GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP  230 (278)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~-~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  230 (278)
                                ..|+.+|...+.+.+.++.+. |+++++++||.|.++.........  . ...       .......+.+
T Consensus       151 ----------~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~~~~~~--~-~~~-------~~~~~~~~~~  210 (264)
T 3tfo_A          151 ----------AVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAGTITHEE--T-MAA-------MDTYRAIALQ  210 (264)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC---------------------------------CCC
T ss_pred             ----------hhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCcccccccchh--H-HHH-------HHhhhccCCC
Confidence                      579999999999999988775 999999999999988643321000  0 000       0001122478


Q ss_pred             HHHHHHHHHhhhcCCCCC
Q 023689          231 VKDVAKAQVLLFESPAAS  248 (278)
Q Consensus       231 ~~D~a~~~~~~~~~~~~~  248 (278)
                      ++|+|+++++++..+...
T Consensus       211 pedvA~~v~~l~s~~~~~  228 (264)
T 3tfo_A          211 PADIARAVRQVIEAPQSV  228 (264)
T ss_dssp             HHHHHHHHHHHHHSCTTE
T ss_pred             HHHHHHHHHHHhcCCccC
Confidence            999999999999887653

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.95  E-value=4.2e-27  Score=192.44  Aligned_cols=218  Identities=16%  Similarity=0.139  Sum_probs=156.3

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCC-CCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS-DSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~-~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~----   79 (278)
                      .+++|++|||||+|+||++++++|+++|+ .|++..++.. ..+.+. .+.... .++.++++|++|++++.++++    
T Consensus        15 ~l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~   92 (270)
T 3is3_A           15 RLDGKVALVTGSGRGIGAAVAVHLGRLGA-KVVVNYANSTKDAEKVVSEIKALG-SDAIAIKADIRQVPEIVKLFDQAVA   92 (270)
T ss_dssp             CCTTCEEEESCTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTT-CCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            56789999999999999999999999999 7777665432 222211 111111 278999999999999888876    


Q ss_pred             ---CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHhcC--CCEEEEecceee-eecCCCCCCccccCC
Q 023689           80 ---GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRFG--VRRVVVTSSISA-IVPNPGWKGKVFDET  149 (278)
Q Consensus        80 ---~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~v~~Ss~~~-~~~~~~~~~~~~~E~  149 (278)
                         ++|++||+||.....    ...++++..+++|+.++.++++++.+.-  .+++|++||..+ ..+.+.         
T Consensus        93 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  163 (270)
T 3is3_A           93 HFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDFSVPK---------  163 (270)
T ss_dssp             HHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTCCCTT---------
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccCCCCC---------
Confidence               679999999976542    2345678899999999999999987653  358999998652 222221         


Q ss_pred             CCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCC---------CchhHHHHHHHhhCC
Q 023689          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPY---------LNASCAVLQQLLQGS  217 (278)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~---------~~~~~~~~~~~~~~~  217 (278)
                                 ...|+.+|.+.+.+.+.++.+   +|+++++++||.+.++.....         ...............
T Consensus       164 -----------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (270)
T 3is3_A          164 -----------HSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHAS  232 (270)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHS
T ss_pred             -----------CchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcC
Confidence                       257999999999999988876   489999999999999864210         001112222222222


Q ss_pred             CCcccccccCcccHHHHHHHHHhhhcCCC--CCceE
Q 023689          218 KDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRY  251 (278)
Q Consensus       218 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~  251 (278)
                      |      ...+.+++|+|+++++++....  ..|..
T Consensus       233 p------~~r~~~p~dvA~~v~~L~s~~~~~itG~~  262 (270)
T 3is3_A          233 P------LHRNGWPQDVANVVGFLVSKEGEWVNGKV  262 (270)
T ss_dssp             T------TCSCBCHHHHHHHHHHHTSGGGTTCCSCE
T ss_pred             C------CCCCCCHHHHHHHHHHHcCCccCCccCcE
Confidence            2      3567889999999999986543  34654

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.95  E-value=2.1e-27  Score=197.51  Aligned_cols=223  Identities=13%  Similarity=0.060  Sum_probs=154.5

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cC----CCCCCCceEEEEccCCChhhHHHHhc-
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-AL----PGAGDANLRVFEADVLDSGAVSRAVE-   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~----~~~~~~~v~~~~~Dl~d~~~~~~~~~-   79 (278)
                      .+++|+||||||+|+||++++++|+++|+ .|+++.|+.+..+... .+    ......++.++.+|++|++++.++++ 
T Consensus        15 ~l~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   93 (303)
T 1yxm_A           15 LLQGQVAIVTGGATGIGKAIVKELLELGS-NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS   93 (303)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHH
Confidence            45678999999999999999999999999 8998888754332211 11    00011278999999999999988876 


Q ss_pred             ------CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHh----cCCCEEEEecceeeeecCCCCCCcc
Q 023689           80 ------GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKV  145 (278)
Q Consensus        80 ------~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~  145 (278)
                            ++|+|||+||.....    ...++++..+++|+.++.++++++.+    .+.+++|++||.+ ..+.+..    
T Consensus        94 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~~~~~~----  168 (303)
T 1yxm_A           94 TLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KAGFPLA----  168 (303)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TTCCTTC----
T ss_pred             HHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-ccCCCcc----
Confidence                  489999999964421    22345678899999999999998755    2357899999866 3332221    


Q ss_pred             ccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCc-hhHHHHHHHhhCCCCcc
Q 023689          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN-ASCAVLQQLLQGSKDTQ  221 (278)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~-~~~~~~~~~~~~~~~~~  221 (278)
                                      ..|+.+|...+.+.+.++++   +|++++++|||.++|+....... .............    
T Consensus       169 ----------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~----  228 (303)
T 1yxm_A          169 ----------------VHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKI----  228 (303)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGS----
T ss_pred             ----------------hhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhcC----
Confidence                            46888888888887777765   49999999999999994211110 0011111111111    


Q ss_pred             cccccCcccHHHHHHHHHhhhcCCC--CCce-EEecCc
Q 023689          222 EYHWLGAVPVKDVAKAQVLLFESPA--ASGR-YLCTNG  256 (278)
Q Consensus       222 ~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  256 (278)
                        ....+.+++|+|+++++++....  ..|. +.+.++
T Consensus       229 --p~~~~~~~~dvA~~i~~l~~~~~~~~~G~~~~v~gG  264 (303)
T 1yxm_A          229 --PAKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGG  264 (303)
T ss_dssp             --TTSSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             --cccCCCCHHHHHHHHHHHhCcccccCCCcEEEECCC
Confidence              13457899999999999986543  3454 444433

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.95  E-value=1e-26  Score=187.62  Aligned_cols=210  Identities=23%  Similarity=0.208  Sum_probs=153.2

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      .+++|++|||||+|+||++++++|.++|+ .|++..|+.+..+.+. .+...+ .++.++.+|++|+++++++++     
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dv~~~~~~~~~~~~~~~~   81 (247)
T 2jah_A            4 ALQGKVALITGASSGIGEATARALAAEGA-AVAIAARRVEKLRALGDELTAAG-AKVHVLELDVADRQGVDAAVASTVEA   81 (247)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            35678999999999999999999999999 8988888754433221 111111 278899999999999888775     


Q ss_pred             --CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHH----hcCCCEEEEecceeeeecCCCCCCccccCC
Q 023689           80 --GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (278)
Q Consensus        80 --~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~  149 (278)
                        ++|++||+||.....    ...++++..+++|+.++.++++++.    +.+ ++||++||..+..+.+..        
T Consensus        82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~--------  152 (247)
T 2jah_A           82 LGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNVRNA--------  152 (247)
T ss_dssp             HSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCCTTC--------
T ss_pred             cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCCCCC--------
Confidence              689999999975432    2234667889999999999888774    345 799999998776543322        


Q ss_pred             CCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccccc
Q 023689          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (278)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (278)
                                  ..|+.+|...+.+.+.++.+   +|+++++++||.+.++.......  .. ........+     ...
T Consensus       153 ------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~--~~-~~~~~~~~~-----~~~  212 (247)
T 2jah_A          153 ------------AVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITH--TA-TKEMYEQRI-----SQI  212 (247)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCC--HH-HHHHHHHHT-----TTS
T ss_pred             ------------cHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccc--hh-hHHHHHhcc-----ccc
Confidence                        57999999999888887764   49999999999999986432211  11 111111111     112


Q ss_pred             CcccHHHHHHHHHhhhcCCC
Q 023689          227 GAVPVKDVAKAQVLLFESPA  246 (278)
Q Consensus       227 ~~i~~~D~a~~~~~~~~~~~  246 (278)
                      .+++++|+|+++++++..+.
T Consensus       213 ~~~~pedvA~~v~~l~s~~~  232 (247)
T 2jah_A          213 RKLQAQDIAEAVRYAVTAPH  232 (247)
T ss_dssp             CCBCHHHHHHHHHHHHHSCT
T ss_pred             CCCCHHHHHHHHHHHhCCCc
Confidence            25899999999999997654

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.95  E-value=2.6e-27  Score=193.17  Aligned_cols=223  Identities=18%  Similarity=0.089  Sum_probs=159.4

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCC-CCCCceEEEEccCCChhhHHHHhc----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPG-AGDANLRVFEADVLDSGAVSRAVE----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~-~~~~~v~~~~~Dl~d~~~~~~~~~----   79 (278)
                      .+++|++|||||+|+||++++++|.++|+ .|++..|+.+..+... .+.. ....++.++.+|++|++++.++++    
T Consensus         5 ~l~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (265)
T 3lf2_A            5 DLSEAVAVVTGGSSGIGLATVELLLEAGA-AVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACER   83 (265)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence            46789999999999999999999999999 8888888765433221 1111 111158999999999998888775    


Q ss_pred             ---CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHHHh----cCCCEEEEecceeeeecCCCCCCccccC
Q 023689           80 ---GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (278)
Q Consensus        80 ---~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~E  148 (278)
                         ++|++||+||....    +...++++..+++|+.++.++++++..    .+.++||++||..+..+.+..       
T Consensus        84 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------  156 (265)
T 3lf2_A           84 TLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHM-------  156 (265)
T ss_dssp             HHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCTTB-------
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCCCc-------
Confidence               67999999997544    223456788999999999999988743    456789999998876554432       


Q ss_pred             CCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCc-------hhHHHHHHHhhCCC
Q 023689          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLN-------ASCAVLQQLLQGSK  218 (278)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~-------~~~~~~~~~~~~~~  218 (278)
                                   ..|+.+|...+.+.+.++.+.   |+++++++||.+.++.......       ....+.........
T Consensus       157 -------------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (265)
T 3lf2_A          157 -------------VATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQ  223 (265)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTT
T ss_pred             -------------hhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccC
Confidence                         579999999999988888754   8999999999998874221100       01111111111100


Q ss_pred             CcccccccCcccHHHHHHHHHhhhcCCC--CCceEEe
Q 023689          219 DTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLC  253 (278)
Q Consensus       219 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~  253 (278)
                          .....+.+++|+|+++++++....  ..|..+.
T Consensus       224 ----~p~~r~~~pedvA~~v~fL~s~~~~~itG~~i~  256 (265)
T 3lf2_A          224 ----IPLGRLGKPIEAARAILFLASPLSAYTTGSHID  256 (265)
T ss_dssp             ----CTTCSCBCHHHHHHHHHHHHSGGGTTCCSEEEE
T ss_pred             ----CCcCCCcCHHHHHHHHHHHhCchhcCcCCCEEE
Confidence                013567899999999999987533  3565443

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.95  E-value=9.6e-27  Score=191.59  Aligned_cols=220  Identities=16%  Similarity=0.126  Sum_probs=158.1

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCC-Cccc-ccCCCCCCCceEEEEccCCChhhHHHHhc----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHL-FALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~-~~~~-~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~----   79 (278)
                      .+++|++|||||+|+||++++++|+++|+ .|++..|+.+. .+.. ..+...+ .++.++.+|++|.+++.++++    
T Consensus        26 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~  103 (283)
T 1g0o_A           26 SLEGKVALVTGAGRGIGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKNG-SDAACVKANVGVVEDIVRMFEEAVK  103 (283)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHHhC-CCeEEEEcCCCCHHHHHHHHHHHHH
Confidence            45678999999999999999999999999 88888887542 1111 1111111 178899999999998887765    


Q ss_pred             ---CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHhc--CCCEEEEecceeeeecCCCCCCccccCCC
Q 023689           80 ---GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (278)
Q Consensus        80 ---~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~  150 (278)
                         ++|+|||+||.....    ...++++..+++|+.++.++++++.+.  +.++||++||..+..+.+.          
T Consensus       104 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~----------  173 (283)
T 1g0o_A          104 IFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVP----------  173 (283)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCS----------
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCCCC----------
Confidence               689999999975432    234567889999999999999999775  5679999999776543221          


Q ss_pred             CCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCC--------chhHHHHHHHhh--CC
Q 023689          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYL--------NASCAVLQQLLQ--GS  217 (278)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~--------~~~~~~~~~~~~--~~  217 (278)
                               ....|+.+|...+.+.+.++.+   +|+++++++||.+.++......        .........+..  ..
T Consensus       174 ---------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (283)
T 1g0o_A          174 ---------KHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWS  244 (283)
T ss_dssp             ---------SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSC
T ss_pred             ---------CCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCC
Confidence                     0257999999999999888865   4899999999999987421100        001122222222  22


Q ss_pred             CCcccccccCcccHHHHHHHHHhhhcCCC--CCceEE
Q 023689          218 KDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYL  252 (278)
Q Consensus       218 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~  252 (278)
                      |      ...+.+++|+|+++++++....  ..|..+
T Consensus       245 p------~~r~~~p~dvA~~v~~l~s~~~~~itG~~i  275 (283)
T 1g0o_A          245 P------LRRVGLPIDIARVVCFLASNDGGWVTGKVI  275 (283)
T ss_dssp             T------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             C------CCCCcCHHHHHHHHHHHhCccccCcCCCEE
Confidence            2      3457899999999999987543  346443

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.95  E-value=6e-28  Score=199.70  Aligned_cols=223  Identities=17%  Similarity=0.125  Sum_probs=158.7

Q ss_pred             cccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCC--CCcccccCCCCCCCceEEEEccCCChhhHHHHhc---
Q 023689            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS--DSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---   79 (278)
Q Consensus         5 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~--~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---   79 (278)
                      ..+++|++|||||+|+||++++++|+++|+ .|++..|+..  ..+.+.........++.++.+|++|+++++++++   
T Consensus        45 ~~l~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  123 (294)
T 3r3s_A           45 GRLKDRKALVTGGDSGIGRAAAIAYAREGA-DVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAR  123 (294)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            356789999999999999999999999999 8888777532  1111111100011278999999999998888775   


Q ss_pred             ----CccEEEEecccCCC-----CCCCCchhhhhhhHHhHHHHHHHHHHhcC--CCEEEEecceeeeecCCCCCCccccC
Q 023689           80 ----GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAKRFG--VRRVVVTSSISAIVPNPGWKGKVFDE  148 (278)
Q Consensus        80 ----~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~v~~Ss~~~~~~~~~~~~~~~~E  148 (278)
                          ++|++||+||....     +...+.++..+++|+.++.++++++...-  .++||++||..++.+.+..       
T Consensus       124 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~-------  196 (294)
T 3r3s_A          124 EALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPSPHL-------  196 (294)
T ss_dssp             HHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCCTTC-------
T ss_pred             HHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCCCCc-------
Confidence                68999999997542     22345678899999999999999997753  3589999998876654432       


Q ss_pred             CCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccc
Q 023689          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (278)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (278)
                                   ..|+.+|.+.+.+.+.++.+.   |+++++++||.|.++....... ...........      ...
T Consensus       197 -------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~-~~~~~~~~~~~------~p~  256 (294)
T 3r3s_A          197 -------------LDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQ-TQDKIPQFGQQ------TPM  256 (294)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTS-CGGGSTTTTTT------STT
T ss_pred             -------------hHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCC-CHHHHHHHHhc------CCC
Confidence                         579999999999998888764   9999999999999975211100 00000111111      124


Q ss_pred             cCcccHHHHHHHHHhhhcCCC--CCce-EEecC
Q 023689          226 LGAVPVKDVAKAQVLLFESPA--ASGR-YLCTN  255 (278)
Q Consensus       226 ~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~  255 (278)
                      ..+.+++|+|+++++++....  ..|. +.+.+
T Consensus       257 ~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdG  289 (294)
T 3r3s_A          257 KRAGQPAELAPVYVYLASQESSYVTAEVHGVCG  289 (294)
T ss_dssp             SSCBCGGGGHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCcCHHHHHHHHHHHhCccccCCCCCEEEECC
Confidence            567899999999999986543  3464 44443

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.95  E-value=2.6e-27  Score=192.21  Aligned_cols=216  Identities=19%  Similarity=0.181  Sum_probs=154.0

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc-------C
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~   80 (278)
                      +|++|||||+|+||++++++|+++|+ .|++..|+.+..+.+. .+.... .++.++++|++|++++.++++       +
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   79 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGF-AVAIADYNDATAKAVASEINQAG-GHAVAVKVDVSDRDQVFAAVEQARKTLGG   79 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTSHHHHHHHHHHHHHHTTC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            47899999999999999999999999 8988888764332221 111111 168899999999999988876       7


Q ss_pred             ccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHh----cC-CCEEEEecceeeeecCCCCCCccccCCCC
Q 023689           81 CKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FG-VRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (278)
Q Consensus        81 ~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~----~~-~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~  151 (278)
                      +|+|||+||.....    ...++++..+++|+.++.++++++.+    ++ .+++|++||..++++.+..          
T Consensus        80 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----------  149 (256)
T 1geg_A           80 FDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPEL----------  149 (256)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTB----------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCc----------
Confidence            89999999875431    22346678999999999887776643    34 5799999998776554321          


Q ss_pred             CchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCc---h-----hHHHHHHHhhCCCCc
Q 023689          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN---A-----SCAVLQQLLQGSKDT  220 (278)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~---~-----~~~~~~~~~~~~~~~  220 (278)
                                ..|+.+|...+.+.+.++.+   +|+++++++||.+.++.......   .     .......+....|  
T Consensus       150 ----------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--  217 (256)
T 1geg_A          150 ----------AVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRIT--  217 (256)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCT--
T ss_pred             ----------hhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcCC--
Confidence                      57999999999998888765   58999999999999874211000   0     0001111111111  


Q ss_pred             ccccccCcccHHHHHHHHHhhhcCCC--CCceEE
Q 023689          221 QEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYL  252 (278)
Q Consensus       221 ~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~  252 (278)
                          ...+.+++|+|+++++++....  ..|..+
T Consensus       218 ----~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i  247 (256)
T 1geg_A          218 ----LGRLSEPEDVAACVSYLASPDSDYMTGQSL  247 (256)
T ss_dssp             ----TCSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             ----CCCCcCHHHHHHHHHHHhCccccCCCCCEE
Confidence                3457899999999999986542  346543

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.95  E-value=5.9e-27  Score=189.92  Aligned_cols=215  Identities=16%  Similarity=0.113  Sum_probs=154.8

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCC--CcccccCCCCCCCceEEEEccCCCh-hhHHHHhc---
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD--SSHLFALPGAGDANLRVFEADVLDS-GAVSRAVE---   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~--~~~~~~~~~~~~~~v~~~~~Dl~d~-~~~~~~~~---   79 (278)
                      .+++|++|||||+|+||++++++|+++|++.|++..|+...  .+.+.....  ..++.++.+|++|+ +++.++++   
T Consensus         2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (254)
T 1sby_A            2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINP--KVNITFHTYDVTVPVAESKKLLKKIF   79 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCT--TSEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCC--CceEEEEEEecCCChHHHHHHHHHHH
Confidence            35678999999999999999999999999438888887532  111111110  12788999999998 88877765   


Q ss_pred             ----CccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhc----C---CCEEEEecceeeeecCCCCCCccccC
Q 023689           80 ----GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF----G---VRRVVVTSSISAIVPNPGWKGKVFDE  148 (278)
Q Consensus        80 ----~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~----~---~~~~v~~Ss~~~~~~~~~~~~~~~~E  148 (278)
                          ++|+|||+||...    .+.++..+++|+.++.++++++.+.    +   .++||++||..++.+.+..       
T Consensus        80 ~~~g~id~lv~~Ag~~~----~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------  148 (254)
T 1sby_A           80 DQLKTVDILINGAGILD----DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQV-------  148 (254)
T ss_dssp             HHHSCCCEEEECCCCCC----TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTS-------
T ss_pred             HhcCCCCEEEECCccCC----HHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCCc-------
Confidence                7899999999743    3678899999999999999988542    1   3689999998776543321       


Q ss_pred             CCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchh--HHHHHHHhhCCCCcccc
Q 023689          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNAS--CAVLQQLLQGSKDTQEY  223 (278)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~  223 (278)
                                   ..|+.+|.+.+.+.+.++.+   +|+++++++||.+.++.........  .........        
T Consensus       149 -------------~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~--------  207 (254)
T 1sby_A          149 -------------PVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLL--------  207 (254)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHT--------
T ss_pred             -------------hHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHHh--------
Confidence                         57999999999999888865   6999999999999998532211000  000111111        


Q ss_pred             cccCcccHHHHHHHHHhhhcCCCCCc-eEEecCc
Q 023689          224 HWLGAVPVKDVAKAQVLLFESPAASG-RYLCTNG  256 (278)
Q Consensus       224 ~~~~~i~~~D~a~~~~~~~~~~~~~~-~~~~~~~  256 (278)
                       ...+.+++|+|++++.+++.. ..| .|.+.++
T Consensus       208 -~~~~~~~~dvA~~i~~~~~~~-~~G~~~~v~gG  239 (254)
T 1sby_A          208 -SHPTQTSEQCGQNFVKAIEAN-KNGAIWKLDLG  239 (254)
T ss_dssp             -TSCCEEHHHHHHHHHHHHHHC-CTTCEEEEETT
T ss_pred             -cCCCCCHHHHHHHHHHHHHcC-CCCCEEEEeCC
Confidence             123458999999999998743 345 5555543

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.95  E-value=3.5e-27  Score=193.64  Aligned_cols=227  Identities=18%  Similarity=0.145  Sum_probs=159.4

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCC----------Ccccc----cCCCCCCCceEEEEccCCCh
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD----------SSHLF----ALPGAGDANLRVFEADVLDS   71 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~----------~~~~~----~~~~~~~~~v~~~~~Dl~d~   71 (278)
                      .+++|++|||||+|+||++++++|+++|+ .|++.+|+.+.          .+.+.    .+.. ...++.++.+|++|+
T Consensus         8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~   85 (277)
T 3tsc_A            8 KLEGRVAFITGAARGQGRAHAVRMAAEGA-DIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEA-ANRRIVAAVVDTRDF   85 (277)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHH-TTCCEEEEECCTTCH
T ss_pred             ccCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeccccccccccccccCHHHHHHHHHHHHh-cCCeEEEEECCCCCH
Confidence            57789999999999999999999999999 88888874321          11111    0111 112789999999999


Q ss_pred             hhHHHHhc-------CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHH----HhcC-CCEEEEecceeee
Q 023689           72 GAVSRAVE-------GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFG-VRRVVVTSSISAI  135 (278)
Q Consensus        72 ~~~~~~~~-------~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~----~~~~-~~~~v~~Ss~~~~  135 (278)
                      +++.++++       ++|++||+||.....    ...++++..+++|+.++.++++++    ++++ .++||++||..++
T Consensus        86 ~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~  165 (277)
T 3tsc_A           86 DRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGM  165 (277)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhC
Confidence            99888875       589999999976542    234567889999999999988875    3333 4689999998876


Q ss_pred             ecCCCCCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHH
Q 023689          136 VPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQ  212 (278)
Q Consensus       136 ~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~  212 (278)
                      .+.+..                    ..|+.+|.+.+.+.+.++.+   +|+++++++||.+.++.....  ........
T Consensus       166 ~~~~~~--------------------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~--~~~~~~~~  223 (277)
T 3tsc_A          166 KMQPFM--------------------IHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGD--MVTAVGQA  223 (277)
T ss_dssp             SCCSSC--------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHH--HHHHHHHH
T ss_pred             CCCCCc--------------------hhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccch--hhhhhhhc
Confidence            554432                    57999999999999888876   489999999999999864321  11111111


Q ss_pred             HhhCCC---CcccccccCcccHHHHHHHHHhhhcCCC--CCceE-EecCc
Q 023689          213 LLQGSK---DTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRY-LCTNG  256 (278)
Q Consensus       213 ~~~~~~---~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~-~~~~~  256 (278)
                      ......   .........+.+++|+|+++++++....  ..|.. .+.++
T Consensus       224 ~~~~~~~~~~~~~~~p~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  273 (277)
T 3tsc_A          224 METNPQLSHVLTPFLPDWVAEPEDIADTVCWLASDESRKVTAAQIPVDQG  273 (277)
T ss_dssp             HHTCGGGTTTTCCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ccccHHHHHHhhhccCCCCCCHHHHHHHHHHHhCccccCCcCCEEeeCCC
Confidence            111110   0011112258899999999999987543  34654 44443

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.95  E-value=8.5e-27  Score=188.92  Aligned_cols=217  Identities=17%  Similarity=0.124  Sum_probs=157.8

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCC--CCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc-------
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNN--YTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g--~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------   79 (278)
                      +|++|||||+|+||++++++|+++|  + .|++..|+.+..+.+....  + .++.++.+|++|+++++++++       
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~-~v~~~~r~~~~~~~~~~~~--~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   77 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDT-VVYGVARSEAPLKKLKEKY--G-DRFFYVVGDITEDSVLKQLVNAAVKGHG   77 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSC-EEEEEESCHHHHHHHHHHH--G-GGEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCe-EEEEecCCHHHHHHHHHHh--C-CceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            4899999999999999999999985  5 7888888765433332111  1 178999999999999888876       


Q ss_pred             CccEEEEecccCCC-----CCCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccCCC
Q 023689           80 GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (278)
Q Consensus        80 ~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~  150 (278)
                      ++|++|||||....     +...++++..+++|+.++.++++++    ++.+ +++|++||..+..+.+..         
T Consensus        78 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~~~~~---------  147 (254)
T 3kzv_A           78 KIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMYFSSW---------  147 (254)
T ss_dssp             CCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCSSCCS---------
T ss_pred             CccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccCCCCc---------
Confidence            68999999997433     2233567889999999999998888    5555 799999998776554332         


Q ss_pred             CCchhhhhccCchhhhHHHHHHHHHHHHHHhc-CCceEEEecceeeCCCCCCCCc------hhHHHHHHHhhCCCCcccc
Q 023689          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH-GVDVVAIHPATCLGPLMQPYLN------ASCAVLQQLLQGSKDTQEY  223 (278)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~-~~~~~~lrp~~i~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~  223 (278)
                                 ..|+.+|...+.+.+.++.+. ++++++++||.+.++.......      ........+....|     
T Consensus       148 -----------~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  211 (254)
T 3kzv_A          148 -----------GAYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKE-----  211 (254)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHT-----
T ss_pred             -----------chHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHh-----
Confidence                       579999999999999998775 9999999999999987543311      11222222222222     


Q ss_pred             cccCcccHHHHHHHHHhhhcCCC---CCceE-EecCc
Q 023689          224 HWLGAVPVKDVAKAQVLLFESPA---ASGRY-LCTNG  256 (278)
Q Consensus       224 ~~~~~i~~~D~a~~~~~~~~~~~---~~~~~-~~~~~  256 (278)
                       ...+.+++|+|+++++++....   ..|.+ .+.++
T Consensus       212 -~~r~~~p~dva~~v~~L~s~~~~~~itG~~i~vdg~  247 (254)
T 3kzv_A          212 -NNQLLDSSVPATVYAKLALHGIPDGVNGQYLSYNDP  247 (254)
T ss_dssp             -TC----CHHHHHHHHHHHHHCCCGGGTTCEEETTCG
T ss_pred             -cCCcCCcccHHHHHHHHHhhcccCCCCccEEEecCc
Confidence             3567899999999999987653   35655 44443

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.95  E-value=1.2e-26  Score=188.08  Aligned_cols=228  Identities=15%  Similarity=0.111  Sum_probs=164.7

Q ss_pred             ccccCCceEEEeCcch--hhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCCCCCCceEEEEccCCChhhHHHHhc-
Q 023689            4 EAEKEEETVCVTGANG--FIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-   79 (278)
Q Consensus         4 m~~~~~~~vlItGatG--~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~-   79 (278)
                      |.++++|++|||||+|  +||+++++.|.++|+ +|++..|+.+..+.+.+ +......++.++++|++|++++.++++ 
T Consensus         1 M~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   79 (256)
T 4fs3_A            1 MLNLENKTYVIMGIANKRSIAFGVAKVLDQLGA-KLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQ   79 (256)
T ss_dssp             CCCCTTCEEEEECCCSTTCHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHH
Confidence            6678999999999887  999999999999999 88888887655443322 111122278899999999998888765 


Q ss_pred             ------CccEEEEecccCCC--------CCCCCchhhhhhhHHhHHHHHHHHHHhc--CCCEEEEecceeeeecCCCCCC
Q 023689           80 ------GCKGVFHVASPCTL--------EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKG  143 (278)
Q Consensus        80 ------~~d~vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~  143 (278)
                            ++|++|||||....        +...++|...+++|+.++..+.+++...  +-+++|++||..+..+.++.  
T Consensus        80 ~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~~~~~--  157 (256)
T 4fs3_A           80 IGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNY--  157 (256)
T ss_dssp             HHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSCCTTT--
T ss_pred             HHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccCcccc--
Confidence                  58999999986543        1122345667789999998888877554  24689999998887665542  


Q ss_pred             ccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHH---hcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCc
Q 023689          144 KVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT  220 (278)
Q Consensus       144 ~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~  220 (278)
                                        ..|+.+|...+.+.+.++.   ++||++++|.||.|.++...... ........+....|  
T Consensus       158 ------------------~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~-~~~~~~~~~~~~~P--  216 (256)
T 4fs3_A          158 ------------------NVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVG-GFNTILKEIKERAP--  216 (256)
T ss_dssp             ------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCT-THHHHHHHHHHHST--
T ss_pred             ------------------hhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhcc-CCHHHHHHHHhcCC--
Confidence                              4577777777777666665   45999999999999988654432 22344444444444  


Q ss_pred             ccccccCcccHHHHHHHHHhhhcCCC--CCceEEecCcccc
Q 023689          221 QEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLCTNGIYQ  259 (278)
Q Consensus       221 ~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~~~~s  259 (278)
                          ...+..++|+|+++++++....  -.|+.+..++.++
T Consensus       217 ----l~R~g~peevA~~v~fL~Sd~a~~iTG~~i~VDGG~~  253 (256)
T 4fs3_A          217 ----LKRNVDQVEVGKTAAYLLSDLSSGVTGENIHVDSGFH  253 (256)
T ss_dssp             ----TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             ----CCCCcCHHHHHHHHHHHhCchhcCccCCEEEECcCHH
Confidence                3456789999999999986533  3576665555544

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.95  E-value=1.5e-26  Score=188.93  Aligned_cols=210  Identities=16%  Similarity=0.141  Sum_probs=158.0

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCC---CCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc---
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNN---YTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g---~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---   79 (278)
                      .++||++|||||+|+||++++++|+++|   + .|+++.|+.+..+.+..+..... ++.++.+|++|++++.++++   
T Consensus        18 ~~~~k~vlITGasggIG~~la~~L~~~G~~~~-~V~~~~r~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~   95 (267)
T 1sny_A           18 GSHMNSILITGCNRGLGLGLVKALLNLPQPPQ-HLFTTCRNREQAKELEDLAKNHS-NIHILEIDLRNFDAYDKLVADIE   95 (267)
T ss_dssp             --CCSEEEESCCSSHHHHHHHHHHHTSSSCCS-EEEEEESCTTSCHHHHHHHHHCT-TEEEEECCTTCGGGHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHhcCCCCc-EEEEEecChhhhHHHHHhhccCC-ceEEEEecCCChHHHHHHHHHHH
Confidence            3568899999999999999999999999   8 89999998765543332211112 78999999999999988886   


Q ss_pred             ------CccEEEEecccCC-C----CCCCCchhhhhhhHHhHHHHHHHHHHhc----------C-----CCEEEEeccee
Q 023689           80 ------GCKGVFHVASPCT-L----EDPVDPEKELILPAVQGTLNVLEAAKRF----------G-----VRRVVVTSSIS  133 (278)
Q Consensus        80 ------~~d~vi~~a~~~~-~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~----------~-----~~~~v~~Ss~~  133 (278)
                            ++|+|||+||... .    ....+.++..+++|+.++.++++++.+.          +     .++||++||..
T Consensus        96 ~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~  175 (267)
T 1sny_A           96 GVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSIL  175 (267)
T ss_dssp             HHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGG
T ss_pred             HhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEeccc
Confidence                  7999999999755 1    2233566788999999999999888443          2     47899999977


Q ss_pred             eeecCCCCCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHH
Q 023689          134 AIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVL  210 (278)
Q Consensus       134 ~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~  210 (278)
                      ++.+....                 .....|+.+|.+.+.+.+.++.+   ++++++++|||.|.++....         
T Consensus       176 ~~~~~~~~-----------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---------  229 (267)
T 1sny_A          176 GSIQGNTD-----------------GGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS---------  229 (267)
T ss_dssp             GCSTTCCS-----------------CCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT---------
T ss_pred             ccccCCCC-----------------CCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC---------
Confidence            75443210                 11246999999999999988876   59999999999998876321         


Q ss_pred             HHHhhCCCCcccccccCcccHHHHHHHHHhhhcCCC--CCceEEe-cCccc
Q 023689          211 QQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLC-TNGIY  258 (278)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~-~~~~~  258 (278)
                                     ..+++++|+|+.++.++.+..  ..|.|+. .++.+
T Consensus       230 ---------------~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~~  265 (267)
T 1sny_A          230 ---------------SAPLDVPTSTGQIVQTISKLGEKQNGGFVNYDGTPL  265 (267)
T ss_dssp             ---------------TCSBCHHHHHHHHHHHHHHCCGGGTTCEECTTSCBC
T ss_pred             ---------------CCCCCHHHHHHHHHHHHHhcCcCCCCcEEccCCcCc
Confidence                           134789999999999987643  3465543 44443

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.94  E-value=1.3e-26  Score=186.13  Aligned_cols=209  Identities=15%  Similarity=0.168  Sum_probs=151.9

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc-------Cc
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~   81 (278)
                      +|++|||||+|+||++++++|.++|+ +|++..|+.+.  ....+      ++.++.+|++| +++.++++       ++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~-~V~~~~r~~~~--~~~~~------~~~~~~~D~~~-~~~~~~~~~~~~~~g~i   71 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGY-RVAIASRNPEE--AAQSL------GAVPLPTDLEK-DDPKGLVKRALEALGGL   71 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHH--HHHHH------TCEEEECCTTT-SCHHHHHHHHHHHHTSC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHH--HHHhh------CcEEEecCCch-HHHHHHHHHHHHHcCCC
Confidence            47999999999999999999999999 89999887644  11111      36788999999 77766654       78


Q ss_pred             cEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccCCCCCc
Q 023689           82 KGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (278)
Q Consensus        82 d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~  153 (278)
                      |++||+||.....    ...++++..+++|+.++.++++++    ++++.+++|++||..++.+...             
T Consensus        72 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------------  138 (239)
T 2ekp_A           72 HVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGP-------------  138 (239)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT-------------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCCC-------------
Confidence            9999999975432    233467889999999998888877    4456789999999777544310             


Q ss_pred             hhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCccc
Q 023689          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP  230 (278)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  230 (278)
                           .....|+.+|.+.+.+.+.++.+.   |++++++|||.+.++..... ..............|      ...+.+
T Consensus       139 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~~p------~~~~~~  206 (239)
T 2ekp_A          139 -----VPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPL-RQNPELYEPITARIP------MGRWAR  206 (239)
T ss_dssp             -----SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH-HTCHHHHHHHHTTCT------TSSCBC
T ss_pred             -----CCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhcc-ccCHHHHHHHHhcCC------CCCCcC
Confidence                 112579999999999998888764   99999999999998853211 001122222222222      345789


Q ss_pred             HHHHHHHHHhhhcCCC--CCceEE
Q 023689          231 VKDVAKAQVLLFESPA--ASGRYL  252 (278)
Q Consensus       231 ~~D~a~~~~~~~~~~~--~~~~~~  252 (278)
                      ++|+|+++++++....  ..|.++
T Consensus       207 ~~dvA~~~~~l~s~~~~~~tG~~~  230 (239)
T 2ekp_A          207 PEEIARVAAVLCGDEAEYLTGQAV  230 (239)
T ss_dssp             HHHHHHHHHHHTSGGGTTCCSCEE
T ss_pred             HHHHHHHHHHHcCchhcCCCCCEE
Confidence            9999999999986532  346543

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.94  E-value=4.2e-27  Score=191.89  Aligned_cols=228  Identities=17%  Similarity=0.184  Sum_probs=161.0

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcc-cccCCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSH-LFALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~-~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      .+++|++|||||+|+||++++++|+++|+ .|+++.|+...... ...+......++.++++|++|+++++++++     
T Consensus        11 ~~~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   89 (265)
T 1h5q_A           11 SFVNKTIIVTGGNRGIGLAFTRAVAAAGA-NVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDAD   89 (265)
T ss_dssp             CCTTEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHh
Confidence            35678999999999999999999999999 89999986554321 111100001278899999999998888775     


Q ss_pred             --CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHhc----C-CCEEEEecceeeeecCCCCCCccccC
Q 023689           80 --GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF----G-VRRVVVTSSISAIVPNPGWKGKVFDE  148 (278)
Q Consensus        80 --~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~----~-~~~~v~~Ss~~~~~~~~~~~~~~~~E  148 (278)
                        .+|+|||+||.....    ...+.++..+++|+.++.++++++.+.    + .++||++||..++.+.+..       
T Consensus        90 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-------  162 (265)
T 1h5q_A           90 LGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSS-------  162 (265)
T ss_dssp             SCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEE-------
T ss_pred             cCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhcccccc-------
Confidence              489999999975432    123456788999999999999987543    3 4789999997765443210       


Q ss_pred             CCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccc
Q 023689          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (278)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (278)
                      ..      ...+...|+.+|.+.+.+.+.++.+   +|++++++|||.++++......   ...........+      .
T Consensus       163 ~~------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~~~~~~~~~~~------~  227 (265)
T 1h5q_A          163 LN------GSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMD---KKIRDHQASNIP------L  227 (265)
T ss_dssp             TT------EECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSC---HHHHHHHHHTCT------T
T ss_pred             cc------ccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccc---hhHHHHHHhcCc------c
Confidence            00      0112357999999999999988865   4899999999999998654321   122222222222      3


Q ss_pred             cCcccHHHHHHHHHhhhcCCC--CCc-eEEecCc
Q 023689          226 LGAVPVKDVAKAQVLLFESPA--ASG-RYLCTNG  256 (278)
Q Consensus       226 ~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  256 (278)
                      ..+++++|+|+++++++....  ..| .+.+.++
T Consensus       228 ~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  261 (265)
T 1h5q_A          228 NRFAQPEEMTGQAILLLSDHATYMTGGEYFIDGG  261 (265)
T ss_dssp             SSCBCGGGGHHHHHHHHSGGGTTCCSCEEEECTT
T ss_pred             cCCCCHHHHHHHHHhhccCchhcCcCcEEEecCC
Confidence            457899999999999987643  345 4555544

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.94  E-value=9.9e-27  Score=186.32  Aligned_cols=194  Identities=20%  Similarity=0.157  Sum_probs=139.6

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc-------C
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~   80 (278)
                      .+|+||||||+|+||++++++|+++|+ .|++..|+.+..+.+....   . ++.++.+|++|++++.++++       +
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~---~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGY-RVGLMARDEKRLQALAAEL---E-GALPLPGDVREEGDWARAVAAMEEAFGE   78 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHS---T-TCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHh---h-hceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            357899999999999999999999999 8999988754433222111   1 67889999999998888775       6


Q ss_pred             ccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHH----HHHhcCCCEEEEecceeeeecCCCCCCccccCCCCC
Q 023689           81 CKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLE----AAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (278)
Q Consensus        81 ~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~----~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~  152 (278)
                      +|+|||+||.....    ...++++..+++|+.++.++++    .+++.+.++||++||..++.+.+.            
T Consensus        79 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~------------  146 (234)
T 2ehd_A           79 LSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKG------------  146 (234)
T ss_dssp             CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCCTT------------
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCCCC------------
Confidence            89999999975431    1234668899999999875554    456667789999999766543222            


Q ss_pred             chhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcc
Q 023689          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (278)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  229 (278)
                              ...|+.+|...+.+.+.++.+   +|++++++|||.+.++.....    .    .     .       ..++
T Consensus       147 --------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~----~----~-----~-------~~~~  198 (234)
T 2ehd_A          147 --------GAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGNT----P----G-----Q-------AWKL  198 (234)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC------------------------------------C
T ss_pred             --------CchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCccccc----c----c-----c-------cCCC
Confidence                    157999999999888877764   589999999999988753211    0    0     0       1157


Q ss_pred             cHHHHHHHHHhhhcCCC
Q 023689          230 PVKDVAKAQVLLFESPA  246 (278)
Q Consensus       230 ~~~D~a~~~~~~~~~~~  246 (278)
                      +++|+|++++.++.++.
T Consensus       199 ~~~dvA~~~~~l~~~~~  215 (234)
T 2ehd_A          199 KPEDVAQAVLFALEMPG  215 (234)
T ss_dssp             CHHHHHHHHHHHHHSCC
T ss_pred             CHHHHHHHHHHHhCCCc
Confidence            99999999999998754

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.94  E-value=2.2e-27  Score=193.18  Aligned_cols=227  Identities=11%  Similarity=0.077  Sum_probs=157.3

Q ss_pred             ccccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc----cCCCCCCCceEEEEccCCChhhHHHH
Q 023689            2 ASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF----ALPGAGDANLRVFEADVLDSGAVSRA   77 (278)
Q Consensus         2 ~~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~----~~~~~~~~~v~~~~~Dl~d~~~~~~~   77 (278)
                      ..|.++++|++|||||+|+||++++++|.++|+ .|++..|.....+.+.    .+...+ .++.++++|++|+++++++
T Consensus         4 ~~~~~l~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~   81 (262)
T 3ksu_A            4 TKYHDLKNKVIVIAGGIKNLGALTAKTFALESV-NLVLHYHQAKDSDTANKLKDELEDQG-AKVALYQSDLSNEEEVAKL   81 (262)
T ss_dssp             CCCSCCTTCEEEEETCSSHHHHHHHHHHTTSSC-EEEEEESCGGGHHHHHHHHHHHHTTT-CEEEEEECCCCSHHHHHHH
T ss_pred             ccccCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecCccCHHHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHHH
Confidence            456678889999999999999999999999999 8888776543322211    111112 2789999999999999888


Q ss_pred             hc-------CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHhc--CCCEEEEecceeeeecCCCCCCc
Q 023689           78 VE-------GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGK  144 (278)
Q Consensus        78 ~~-------~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~  144 (278)
                      ++       ++|++|||||.....    ...+.++..+++|+.++.++++++...  +.+++|++||..+..+.+..   
T Consensus        82 ~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~---  158 (262)
T 3ksu_A           82 FDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTGFY---  158 (262)
T ss_dssp             HHHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHHCCC---
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCCCCC---
Confidence            76       689999999975542    234567888999999999999999775  45689999997776554332   


Q ss_pred             cccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcc
Q 023689          145 VFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ  221 (278)
Q Consensus       145 ~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~  221 (278)
                                       ..|+.+|.+.+.+.+.++.+.   |+++++++||.|.++.......  ...........    
T Consensus       159 -----------------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~--~~~~~~~~~~~----  215 (262)
T 3ksu_A          159 -----------------STYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQET--KESTAFHKSQA----  215 (262)
T ss_dssp             -----------------CC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC------------------
T ss_pred             -----------------chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCc--hHHHHHHHhcC----
Confidence                             569999999999988888764   8999999999998764322100  00011111111    


Q ss_pred             cccccCcccHHHHHHHHHhhhcCC-CCCceE-EecCccc
Q 023689          222 EYHWLGAVPVKDVAKAQVLLFESP-AASGRY-LCTNGIY  258 (278)
Q Consensus       222 ~~~~~~~i~~~D~a~~~~~~~~~~-~~~~~~-~~~~~~~  258 (278)
                        ....+.+++|+|+++++++... ...|.. .+.++..
T Consensus       216 --~~~r~~~pedvA~~v~~L~s~~~~itG~~i~vdGg~~  252 (262)
T 3ksu_A          216 --MGNQLTKIEDIAPIIKFLTTDGWWINGQTIFANGGYT  252 (262)
T ss_dssp             --CCCCSCCGGGTHHHHHHHHTTTTTCCSCEEEESTTCC
T ss_pred             --cccCCCCHHHHHHHHHHHcCCCCCccCCEEEECCCcc
Confidence              2355789999999999998752 134654 4555433

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.94  E-value=9.2e-27  Score=190.08  Aligned_cols=227  Identities=15%  Similarity=0.134  Sum_probs=159.1

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCC-CCCceEEEEccCCChhhHHHHhc---C
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGA-GDANLRVFEADVLDSGAVSRAVE---G   80 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~-~~~~v~~~~~Dl~d~~~~~~~~~---~   80 (278)
                      .+++|++|||||+|+||++++++|+++|+ .|++..|+.+..+... .+... ....+.++.+|++|+++++++++   +
T Consensus         7 ~l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~   85 (267)
T 3t4x_A            7 QLKGKTALVTGSTAGIGKAIATSLVAEGA-NVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPK   85 (267)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCC
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCC
Confidence            56789999999999999999999999999 8988888765432221 11110 11267899999999999888876   6


Q ss_pred             ccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccCCCCC
Q 023689           81 CKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (278)
Q Consensus        81 ~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~  152 (278)
                      +|++||+||.....    ...++++..+++|+.++.++.+++    ++++.+++|++||..++.+.+..           
T Consensus        86 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----------  154 (267)
T 3t4x_A           86 VDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEM-----------  154 (267)
T ss_dssp             CSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCTTC-----------
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCCcc-----------
Confidence            89999999976542    223466788999999977766555    55666799999998876554332           


Q ss_pred             chhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCC--------CchhHHHHHHHhhCCCCcc
Q 023689          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPY--------LNASCAVLQQLLQGSKDTQ  221 (278)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~--------~~~~~~~~~~~~~~~~~~~  221 (278)
                               ..|+.+|.+.+.+.+.++.+.   |+++++++||.+.++.....        .................. 
T Consensus       155 ---------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  224 (267)
T 3t4x_A          155 ---------AHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPT-  224 (267)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTT-
T ss_pred             ---------hHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCc-
Confidence                     579999999999999998764   79999999999988732110        000111111111111000 


Q ss_pred             cccccCcccHHHHHHHHHhhhcCCC--CCce-EEecC
Q 023689          222 EYHWLGAVPVKDVAKAQVLLFESPA--ASGR-YLCTN  255 (278)
Q Consensus       222 ~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~  255 (278)
                       .....+.+++|+|+++++++....  ..|. +.+.+
T Consensus       225 -~~~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdG  260 (267)
T 3t4x_A          225 -SIIQRLIRPEEIAHLVTFLSSPLSSAINGSALRIDG  260 (267)
T ss_dssp             -CSSCSCBCTHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             -ccccCccCHHHHHHHHHHHcCccccCccCCeEEECC
Confidence             014578999999999999987533  3464 44443

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.94  E-value=3.4e-27  Score=192.13  Aligned_cols=218  Identities=21%  Similarity=0.197  Sum_probs=155.9

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      .+++|++|||||+|+||++++++|+++|+ .|++..|+.+..+.+. .+...+ .++.++.+|++|++++.++++     
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (262)
T 1zem_A            4 KFNGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMNREALEKAEASVREKG-VEARSYVCDVTSEEAVIGTVDSVVRD   81 (262)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTT-SCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            46679999999999999999999999999 8888888764433221 111111 278899999999998887775     


Q ss_pred             --CccEEEEecccC-CC----CCCCCchhhhhhhHHhHHHHHHHHHHh----cCCCEEEEecceeeeecCCCCCCccccC
Q 023689           80 --GCKGVFHVASPC-TL----EDPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (278)
Q Consensus        80 --~~d~vi~~a~~~-~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~E  148 (278)
                        ++|+|||+||.. ..    +...++++..+++|+.++.++++++.+    ++.++||++||..++.+.+..       
T Consensus        82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------  154 (262)
T 1zem_A           82 FGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNM-------  154 (262)
T ss_dssp             HSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTB-------
T ss_pred             hCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCC-------
Confidence              689999999975 21    223456788999999999988887744    456799999998876554331       


Q ss_pred             CCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCC------------CchhHH-HHHH
Q 023689          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPY------------LNASCA-VLQQ  212 (278)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~------------~~~~~~-~~~~  212 (278)
                                   ..|+.+|...+.+.+.++.+   +|+++++++||.+.++.....            ...... ....
T Consensus       155 -------------~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (262)
T 1zem_A          155 -------------AAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQ  221 (262)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHH
T ss_pred             -------------chHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHH
Confidence                         47999999998888887754   589999999999988742210            000011 1122


Q ss_pred             HhhCCCCcccccccCcccHHHHHHHHHhhhcCCC--CCceE
Q 023689          213 LLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRY  251 (278)
Q Consensus       213 ~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~  251 (278)
                      .....|      ...+..++|+|+++++++....  ..|..
T Consensus       222 ~~~~~p------~~r~~~p~dvA~~v~~l~s~~~~~itG~~  256 (262)
T 1zem_A          222 MIGSVP------MRRYGDINEIPGVVAFLLGDDSSFMTGVN  256 (262)
T ss_dssp             HHHTST------TSSCBCGGGSHHHHHHHHSGGGTTCCSCE
T ss_pred             HHhcCC------CCCCcCHHHHHHHHHHHcCchhcCcCCcE
Confidence            222222      2357799999999999986533  24544

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.94  E-value=3.7e-27  Score=194.09  Aligned_cols=214  Identities=14%  Similarity=0.103  Sum_probs=156.9

Q ss_pred             cccCCceEEEeCcchhhHHHHHHHHHHCCCC--eEEEEecCCCCCccccc-CCCC-CCCceEEEEccCCChhhHHHHhc-
Q 023689            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYT--SINATVFPGSDSSHLFA-LPGA-GDANLRVFEADVLDSGAVSRAVE-   79 (278)
Q Consensus         5 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~--~v~~~~r~~~~~~~~~~-~~~~-~~~~v~~~~~Dl~d~~~~~~~~~-   79 (278)
                      ..+++|++|||||+|+||++++++|+++|+.  .|++..|+.+..+.+.. +... ...++.++.+|++|+++++++++ 
T Consensus        29 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~  108 (287)
T 3rku_A           29 ERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIEN  108 (287)
T ss_dssp             HHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHT
T ss_pred             hhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHH
Confidence            4567899999999999999999999998862  67778886654333221 1100 11278999999999999999886 


Q ss_pred             ------CccEEEEecccCCC-----CCCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCc
Q 023689           80 ------GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGK  144 (278)
Q Consensus        80 ------~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~  144 (278)
                            ++|++|||||....     +...++++..+++|+.|+.++++++    ++++.++||++||..+..+.+..   
T Consensus       109 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~---  185 (287)
T 3rku_A          109 LPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTG---  185 (287)
T ss_dssp             SCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTC---
T ss_pred             HHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCCCCC---
Confidence                  57999999997542     2234567899999999999999887    45567899999998876554432   


Q ss_pred             cccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcc
Q 023689          145 VFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ  221 (278)
Q Consensus       145 ~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~  221 (278)
                                       ..|+.+|.+.+.+.+.++.+   +|+++++++||.|.++...................     
T Consensus       186 -----------------~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-----  243 (287)
T 3rku_A          186 -----------------SIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKD-----  243 (287)
T ss_dssp             -----------------HHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHHTT-----
T ss_pred             -----------------chHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHhhcc-----
Confidence                             57999999999999999876   58999999999999875211100011111121221     


Q ss_pred             cccccCcccHHHHHHHHHhhhcCCCC
Q 023689          222 EYHWLGAVPVKDVAKAQVLLFESPAA  247 (278)
Q Consensus       222 ~~~~~~~i~~~D~a~~~~~~~~~~~~  247 (278)
                          ..+++++|+|+++++++.....
T Consensus       244 ----~~p~~pedvA~~v~~l~s~~~~  265 (287)
T 3rku_A          244 ----TTPLMADDVADLIVYATSRKQN  265 (287)
T ss_dssp             ----SCCEEHHHHHHHHHHHHTSCTT
T ss_pred             ----cCCCCHHHHHHHHHHHhCCCCC
Confidence                2234899999999999987654

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.94  E-value=2.4e-26  Score=192.77  Aligned_cols=217  Identities=15%  Similarity=0.114  Sum_probs=155.9

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEe-cCCCCCcccc-cCCCCCCCceEEEEccCCChh---------
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATV-FPGSDSSHLF-ALPGAGDANLRVFEADVLDSG---------   72 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~-r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~---------   72 (278)
                      |..+++|++|||||+|+||++++++|+++|+ .|++.. |+.+..+.+. .+......++.++.+|++|++         
T Consensus        41 m~~l~~k~~lVTGas~GIG~aia~~La~~G~-~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~  119 (328)
T 2qhx_A           41 MTAPTVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADG  119 (328)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC------
T ss_pred             ccccCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhcccccccc
Confidence            4446678999999999999999999999999 888888 7654332221 111000127899999999999         


Q ss_pred             --------hHHHHhc-------CccEEEEecccCCCCC----C--------------CCchhhhhhhHHhHHHHHHHHHH
Q 023689           73 --------AVSRAVE-------GCKGVFHVASPCTLED----P--------------VDPEKELILPAVQGTLNVLEAAK  119 (278)
Q Consensus        73 --------~~~~~~~-------~~d~vi~~a~~~~~~~----~--------------~~~~~~~~~~n~~~~~~ll~~~~  119 (278)
                              ++.++++       ++|+||||||......    .              .+.++..+++|+.++.++++++.
T Consensus       120 ~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~  199 (328)
T 2qhx_A          120 SAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFA  199 (328)
T ss_dssp             -CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             ccccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHH
Confidence                    8888776       6899999999754321    1              34567789999999998888774


Q ss_pred             ----hcC------CCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCce
Q 023689          120 ----RFG------VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDV  186 (278)
Q Consensus       120 ----~~~------~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~  186 (278)
                          +++      .++||++||..+..+.+..                    ..|+.+|.+.+.+.+.++.+.   |+++
T Consensus       200 ~~m~~~~~~~~~~~g~IV~isS~~~~~~~~~~--------------------~~Y~asKaal~~l~~~la~el~~~gIrv  259 (328)
T 2qhx_A          200 HRVAGTPAKHRGTNYSIINMVDAMTNQPLLGY--------------------TIYTMAKGALEGLTRSAALELAPLQIRV  259 (328)
T ss_dssp             HHHHHSCGGGSCSCEEEEEECCTTTTSCCTTC--------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred             HHHHhcCCcCCCCCcEEEEECchhhccCCCCc--------------------HHHHHHHHHHHHHHHHHHHHHhhcCcEE
Confidence                334      5799999997765443321                    579999999999998888764   8999


Q ss_pred             EEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccccc-CcccHHHHHHHHHhhhcCCC--CCceEE
Q 023689          187 VAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL-GAVPVKDVAKAQVLLFESPA--ASGRYL  252 (278)
Q Consensus       187 ~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~D~a~~~~~~~~~~~--~~~~~~  252 (278)
                      ++++||.|.++. ...    ...........|.      . .+.+++|+|+++++++....  ..|.++
T Consensus       260 n~v~PG~v~T~~-~~~----~~~~~~~~~~~p~------~~r~~~pedvA~~v~~l~s~~~~~itG~~i  317 (328)
T 2qhx_A          260 NGVGPGLSVLVD-DMP----PAVWEGHRSKVPL------YQRDSSAAEVSDVVIFLCSSKAKYITGTCV  317 (328)
T ss_dssp             EEEEESSBSCCC-CSC----HHHHHHHHTTCTT------TTSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             EEEecCcccCCc-ccc----HHHHHHHHhhCCC------CCCCCCHHHHHHHHHHHhCccccCccCcEE
Confidence            999999999987 321    2233333333332      2 57899999999999986432  346543

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.94  E-value=6.5e-27  Score=189.51  Aligned_cols=221  Identities=18%  Similarity=0.175  Sum_probs=154.9

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      ++++|++|||||+|+||++++++|+++|+ .|++..|+.+..+.+. .+   . .++.++++|++|+++++++++     
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~D~~~~~~v~~~~~~~~~~   77 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGA-KVAFSDINEAAGQQLAAEL---G-ERSMFVRHDVSSEADWTLVMAAVQRR   77 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHH---C-TTEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHc---C-CceEEEEccCCCHHHHHHHHHHHHHH
Confidence            45678999999999999999999999999 8988888754433221 11   1 178899999999999888776     


Q ss_pred             --CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHH----HHHhcCCCEEEEecceeeeecCCCCCCccccCC
Q 023689           80 --GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLE----AAKRFGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (278)
Q Consensus        80 --~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~----~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~  149 (278)
                        ++|+|||+||.....    ...++++..+++|+.++..+.+    .+++++ ++||++||..++.+.+..        
T Consensus        78 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~--------  148 (253)
T 1hxh_A           78 LGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQY--------  148 (253)
T ss_dssp             HCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCTTB--------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCCCCC--------
Confidence              469999999975431    2334678889999887766555    445566 899999998776543321        


Q ss_pred             CCCchhhhhccCchhhhHHHHHHHHHHHHHHh---c--CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccc
Q 023689          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---H--GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (278)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~--~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (278)
                                  ..|+.+|...+.+.+.++.+   +  |++++++|||.++|+.......  ...............  .
T Consensus       149 ------------~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~~~~~~~~~~~~~~--p  212 (253)
T 1hxh_A          149 ------------AGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLP--KGVSKEMVLHDPKLN--R  212 (253)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSC--TTCCHHHHBCBTTTB--T
T ss_pred             ------------ccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccc--hhhhHHHHhhhhccC--c
Confidence                        57999999999998888765   3  8999999999999985321000  000011011100000  1


Q ss_pred             ccCcccHHHHHHHHHhhhcCCC--CCceE-EecCc
Q 023689          225 WLGAVPVKDVAKAQVLLFESPA--ASGRY-LCTNG  256 (278)
Q Consensus       225 ~~~~i~~~D~a~~~~~~~~~~~--~~~~~-~~~~~  256 (278)
                      ...+.+++|+|+++++++....  ..|.+ .+.++
T Consensus       213 ~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG  247 (253)
T 1hxh_A          213 AGRAYMPERIAQLVLFLASDESSVMSGSELHADNS  247 (253)
T ss_dssp             TCCEECHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             cCCCCCHHHHHHHHHHHcCccccCCCCcEEEECCC
Confidence            3457899999999999987643  34654 44443

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.94  E-value=1.2e-26  Score=185.75  Aligned_cols=196  Identities=16%  Similarity=0.074  Sum_probs=149.3

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc-------Cc
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~   81 (278)
                      ||++|||||+|+||++++++|.++|+ .|++..|+.+..+......  .. ++.++.+|++|+++++++++       ++
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~--~~-~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   78 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVERGH-QVSMMGRRYQRLQQQELLL--GN-AVIGIVADLAHHEDVDVAFAAAVEWGGLP   78 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH--GG-GEEEEECCTTSHHHHHHHHHHHHHHHCSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHh--cC-CceEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            68999999999999999999999999 8999998765443332211  11 68899999999999888876       57


Q ss_pred             cEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHHHh----cCCCEEEEecceeeeecCCCCCCccccCCCCCc
Q 023689           82 KGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (278)
Q Consensus        82 d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~  153 (278)
                      |++||+||....    +...++++..+++|+.++.++++++..    .+ +++|++||..+..+.+..            
T Consensus        79 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~~~~------------  145 (235)
T 3l6e_A           79 ELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG-GVLANVLSSAAQVGKANE------------  145 (235)
T ss_dssp             SEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-EEEEEECCEECCSSCSSH------------
T ss_pred             cEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEEeCHHhcCCCCCC------------
Confidence            999999997543    223456788999999999888887743    33 489999998887654432            


Q ss_pred             hhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCccc
Q 023689          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP  230 (278)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  230 (278)
                              ..|+.||.+.+.+.+.++.+   +|+++++++||.+.++.......            .      ....+++
T Consensus       146 --------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~------------~------~~~~~~~  199 (235)
T 3l6e_A          146 --------SLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTDH------------V------DPSGFMT  199 (235)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC-----------------------------CBC
T ss_pred             --------cHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhccCC------------C------CCcCCCC
Confidence                    57999999999999998875   48999999999998876332200            0      1235789


Q ss_pred             HHHHHHHHHhhhcCCCC
Q 023689          231 VKDVAKAQVLLFESPAA  247 (278)
Q Consensus       231 ~~D~a~~~~~~~~~~~~  247 (278)
                      ++|+|+++++++.++..
T Consensus       200 pedvA~~v~~l~~~~~~  216 (235)
T 3l6e_A          200 PEDAAAYMLDALEARSS  216 (235)
T ss_dssp             HHHHHHHHHHHTCCCSS
T ss_pred             HHHHHHHHHHHHhCCCC
Confidence            99999999999986554

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.94  E-value=6.8e-27  Score=191.62  Aligned_cols=224  Identities=18%  Similarity=0.121  Sum_probs=158.5

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHH-CCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc------
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLD-NNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~-~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~------   79 (278)
                      ++|+||||||+|+||++++++|++ .|+ .|+++.|+.+...... .+.... .++.++.+|++|.+++.++++      
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~-~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~   80 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEG-LSPRFHQLDIDDLQSIRALRDFLRKEY   80 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTT-CCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCC-eEEEEeCChHHHHHHHHHHHhcC-CeeEEEECCCCCHHHHHHHHHHHHHhc
Confidence            468999999999999999999999 999 8999988754332211 111111 178899999999999988877      


Q ss_pred             -CccEEEEecccCCCCCC----CCchhhhhhhHHhHHHHHHHHHHhcC--CCEEEEecceeeeecCCCC--------CCc
Q 023689           80 -GCKGVFHVASPCTLEDP----VDPEKELILPAVQGTLNVLEAAKRFG--VRRVVVTSSISAIVPNPGW--------KGK  144 (278)
Q Consensus        80 -~~d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~v~~Ss~~~~~~~~~~--------~~~  144 (278)
                       ++|+|||+||.......    .+.++..+++|+.++.++++++.+..  .++||++||..++++....        ...
T Consensus        81 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~  160 (276)
T 1wma_A           81 GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSE  160 (276)
T ss_dssp             SSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCS
T ss_pred             CCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhcccc
Confidence             78999999997543221    24567889999999999999997752  3589999998776531110        001


Q ss_pred             cccCCCCCch-------------hhhhccCchhhhHHHHHHHHHHHHHHh-------cCCceEEEecceeeCCCCCCCCc
Q 023689          145 VFDETSWTDL-------------EYCKSRKKWYPVSKTLAEKAAWEFAEK-------HGVDVVAIHPATCLGPLMQPYLN  204 (278)
Q Consensus       145 ~~~E~~~~~~-------------~~~~~~~~~y~~sK~~~e~~~~~~~~~-------~~~~~~~lrp~~i~g~~~~~~~~  204 (278)
                      .++|+++...             .....+...|+.+|.+.+.+.+.++++       .|+++++++||.|.++....   
T Consensus       161 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~---  237 (276)
T 1wma_A          161 TITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP---  237 (276)
T ss_dssp             SCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT---
T ss_pred             ccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc---
Confidence            1222110000             000112368999999999998888765       58999999999999876332   


Q ss_pred             hhHHHHHHHhhCCCCcccccccCcccHHHHHHHHHhhhcCCC----CCceEEecCcc
Q 023689          205 ASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA----ASGRYLCTNGI  257 (278)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~----~~~~~~~~~~~  257 (278)
                                           ..+.+++|+|+++++++.++.    ..|.|+..+..
T Consensus       238 ---------------------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~~~~~  273 (276)
T 1wma_A          238 ---------------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVSEKRV  273 (276)
T ss_dssp             ---------------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEETTEE
T ss_pred             ---------------------cccCChhHhhhhHhhhhcCcccccccCceEeccCce
Confidence                                 135799999999999997552    35666654443

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.94  E-value=1e-26  Score=185.80  Aligned_cols=198  Identities=16%  Similarity=0.072  Sum_probs=146.1

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCc----cEE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGC----KGV   84 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~----d~v   84 (278)
                      ||++|||||+|+||++++++|+++|+ .|++..|+.+..+.+....   ..++.++.+|++|++++.++++.+    |+|
T Consensus         1 Mk~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~l   76 (230)
T 3guy_A            1 MSLIVITGASSGLGAELAKLYDAEGK-ATYLTGRSESKLSTVTNCL---SNNVGYRARDLASHQEVEQLFEQLDSIPSTV   76 (230)
T ss_dssp             --CEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTC---SSCCCEEECCTTCHHHHHHHHHSCSSCCSEE
T ss_pred             CCEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHH---hhccCeEeecCCCHHHHHHHHHHHhhcCCEE
Confidence            57899999999999999999999999 7988988765544333211   127889999999999999998764    999


Q ss_pred             EEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHhc---CCCEEEEecceeeeecCCCCCCccccCCCCCchhhh
Q 023689           85 FHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYC  157 (278)
Q Consensus        85 i~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~  157 (278)
                      ||+||.....    ...++++..+++|+.++.++++++.+.   ...++|++||..+..+.+..                
T Consensus        77 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~~~----------------  140 (230)
T 3guy_A           77 VHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPKAQE----------------  140 (230)
T ss_dssp             EECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSCCTTC----------------
T ss_pred             EEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCCCCCC----------------
Confidence            9999975432    233567889999999999999987553   12389999998776554332                


Q ss_pred             hccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHHHH
Q 023689          158 KSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDV  234 (278)
Q Consensus       158 ~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  234 (278)
                          ..|+.+|.+.+.+.+.++.+.   |+++++++||.+.++......           ...      ....+++++|+
T Consensus       141 ----~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-----------~~~------~~~~~~~~~dv  199 (230)
T 3guy_A          141 ----STYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWETSG-----------KSL------DTSSFMSAEDA  199 (230)
T ss_dssp             ----HHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC---------------------------------CCCHHHH
T ss_pred             ----chhHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHhcC-----------CCC------CcccCCCHHHH
Confidence                579999999999999998765   899999999999887543221           001      13567899999


Q ss_pred             HHHHHhhhcCCCC
Q 023689          235 AKAQVLLFESPAA  247 (278)
Q Consensus       235 a~~~~~~~~~~~~  247 (278)
                      |++++.++.++..
T Consensus       200 A~~i~~l~~~~~~  212 (230)
T 3guy_A          200 ALMIHGALANIGN  212 (230)
T ss_dssp             HHHHHHHCCEETT
T ss_pred             HHHHHHHHhCcCC
Confidence            9999999876544

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.94  E-value=1.6e-26  Score=187.70  Aligned_cols=225  Identities=15%  Similarity=0.080  Sum_probs=145.8

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcC----ccEE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG----CKGV   84 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~----~d~v   84 (278)
                      ||++|||||+|+||++++++|+++|+ .|++..|+.+....          .   +++|++|+++++++++.    +|+|
T Consensus         1 mk~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~----------~---~~~Dl~~~~~v~~~~~~~~~~id~l   66 (257)
T 1fjh_A            1 MSIIVISGCATGIGAATRKVLEAAGH-QIVGIDIRDAEVIA----------D---LSTAEGRKQAIADVLAKCSKGMDGL   66 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSSSEEC----------C---TTSHHHHHHHHHHHHTTCTTCCSEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCchhhcc----------c---cccCCCCHHHHHHHHHHhCCCCCEE
Confidence            57899999999999999999999999 89999887654321          1   45999999999998865    4999


Q ss_pred             EEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHH----hcCCCEEEEecceeeeecCCCC--CCccccCCCCCchh---
Q 023689           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGW--KGKVFDETSWTDLE---  155 (278)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~v~~Ss~~~~~~~~~~--~~~~~~E~~~~~~~---  155 (278)
                      ||+||....   ...++..+++|+.++.++++++.    +++.++||++||..++......  ....+.+.++....   
T Consensus        67 v~~Ag~~~~---~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (257)
T 1fjh_A           67 VLCAGLGPQ---TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIV  143 (257)
T ss_dssp             EECCCCCTT---CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHH
T ss_pred             EECCCCCCC---cccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhhhh
Confidence            999997541   24589999999999999988885    4566899999998776321100  00000000000000   


Q ss_pred             ---hhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcc
Q 023689          156 ---YCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (278)
Q Consensus       156 ---~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  229 (278)
                         ........|+.||.+.+.+.+.++.+   +|+++++++||.+.++.......  ...........    ......++
T Consensus       144 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~----~~~~~~~~  217 (257)
T 1fjh_A          144 EHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQ--DPRYGESIAKF----VPPMGRRA  217 (257)
T ss_dssp             HTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-----------------------C----CCSTTSCC
T ss_pred             hcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhcc--chhHHHHHHhc----ccccCCCC
Confidence               00011257999999999999888765   59999999999999986433200  01111111100    11123578


Q ss_pred             cHHHHHHHHHhhhcCCC--CCceE-EecCc
Q 023689          230 PVKDVAKAQVLLFESPA--ASGRY-LCTNG  256 (278)
Q Consensus       230 ~~~D~a~~~~~~~~~~~--~~~~~-~~~~~  256 (278)
                      +++|+|+++++++..+.  ..|.+ .+.++
T Consensus       218 ~~~dvA~~~~~l~~~~~~~~tG~~~~vdgG  247 (257)
T 1fjh_A          218 EPSEMASVIAFLMSPAASYVHGAQIVIDGG  247 (257)
T ss_dssp             CTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             CHHHHHHHHHHHhCchhcCCcCCEEEECCC
Confidence            99999999999987652  34654 44443

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.94  E-value=1.8e-27  Score=194.79  Aligned_cols=203  Identities=14%  Similarity=0.056  Sum_probs=152.2

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc---
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE---   79 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---   79 (278)
                      +..+++|++|||||+|+||++++++|+++|+ .|++++|+.+..+.+. .+...+ .++.++.+|++|++++.++++   
T Consensus        26 ~~~l~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~  103 (272)
T 1yb1_A           26 RKSVTGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLG-AKVHTFVVDCSNREDIYSSAKKVK  103 (272)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEEcCHHHHHHHHHHHHhcC-CeEEEEEeeCCCHHHHHHHHHHHH
Confidence            3456789999999999999999999999999 8999988764332221 111111 278999999999998888875   


Q ss_pred             ----CccEEEEecccCCCCC----CCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCcccc
Q 023689           80 ----GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFD  147 (278)
Q Consensus        80 ----~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~  147 (278)
                          ++|+|||+||......    ..+.++..+++|+.++.++++++    ++.+.++||++||..++.+.+        
T Consensus       104 ~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~--------  175 (272)
T 1yb1_A          104 AEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVP--------  175 (272)
T ss_dssp             HHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHH--------
T ss_pred             HHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCC--------
Confidence                6899999999755321    12355788999999977766665    456778999999977654321        


Q ss_pred             CCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc------CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcc
Q 023689          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH------GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ  221 (278)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~------~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~  221 (278)
                             .     ...|+.+|.+.+.+.+.++.+.      |++++++|||.+.++.....   .               
T Consensus       176 -------~-----~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~~---~---------------  225 (272)
T 1yb1_A          176 -------F-----LLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP---S---------------  225 (272)
T ss_dssp             -------H-----HHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT---H---------------
T ss_pred             -------C-----chhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccccc---c---------------
Confidence                   1     1579999999999999888754      89999999999998863211   0               


Q ss_pred             cccccCcccHHHHHHHHHhhhcCCCC
Q 023689          222 EYHWLGAVPVKDVAKAQVLLFESPAA  247 (278)
Q Consensus       222 ~~~~~~~i~~~D~a~~~~~~~~~~~~  247 (278)
                       .....+++++|+|++++.++.++..
T Consensus       226 -~~~~~~~~~~dva~~i~~~~~~~~~  250 (272)
T 1yb1_A          226 -TSLGPTLEPEEVVNRLMHGILTEQK  250 (272)
T ss_dssp             -HHHCCCCCHHHHHHHHHHHHHTTCS
T ss_pred             -ccccCCCCHHHHHHHHHHHHHcCCC
Confidence             0124578999999999999986543

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.94  E-value=1.4e-26  Score=185.64  Aligned_cols=202  Identities=17%  Similarity=0.102  Sum_probs=153.4

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc-------
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------   79 (278)
                      +||++|||||+|+||++++++|+++|+ .|++..|+.+..+... .+......++.++++|++|++++.++++       
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   79 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGY-ALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFG   79 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence            368999999999999999999999999 8988888765433221 1110011278999999999999999887       


Q ss_pred             CccEEEEecccCCCCC----CCCchhhhhhhHHhHHHHHHHHHHhc---CCCEEEEecceeeeecCCCCCCccccCCCCC
Q 023689           80 GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (278)
Q Consensus        80 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~  152 (278)
                      ++|++||+||......    ..++++..+++|+.++.++++++...   +.+++|++||..+..+.+..           
T Consensus        80 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~-----------  148 (235)
T 3l77_A           80 DVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLIPYG-----------  148 (235)
T ss_dssp             SCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSCCTTC-----------
T ss_pred             CCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcccCCCc-----------
Confidence            6899999999765422    34567889999999999999988542   34678888887765544332           


Q ss_pred             chhhhhccCchhhhHHHHHHHHHHHHHHh-cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccH
Q 023689          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK-HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPV  231 (278)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  231 (278)
                               ..|+.+|.+.+.+.+.+..+ .++++++++||.+.++.......            .+     ....++++
T Consensus       149 ---------~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~~~~------------~~-----~~~~~~~p  202 (235)
T 3l77_A          149 ---------GGYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGSKPG------------KP-----KEKGYLKP  202 (235)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTCCSC------------CC-----GGGTCBCH
T ss_pred             ---------chHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCccccccccccCC------------cc-----cccCCCCH
Confidence                     57999999999999887544 49999999999998876443211            00     12357899


Q ss_pred             HHHHHHHHhhhcCCCC
Q 023689          232 KDVAKAQVLLFESPAA  247 (278)
Q Consensus       232 ~D~a~~~~~~~~~~~~  247 (278)
                      +|+|+++++++.++..
T Consensus       203 ~dva~~v~~l~~~~~~  218 (235)
T 3l77_A          203 DEIAEAVRCLLKLPKD  218 (235)
T ss_dssp             HHHHHHHHHHHTSCTT
T ss_pred             HHHHHHHHHHHcCCCC
Confidence            9999999999987654

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.94  E-value=2e-26  Score=188.38  Aligned_cols=219  Identities=17%  Similarity=0.161  Sum_probs=156.6

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCC-Cccc-ccCCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHL-FALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~-~~~~-~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      +++|++|||||+|+||++++++|+++|+ .|++..++... .... ....... .++.++.+|++|+++++++++     
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~  100 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDAGM-AVAVSHSERNDHVSTWLMHERDAG-RDFKAYAVDVADFESCERCAEKVLAD  100 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEECSCHHHHHHHHHHHHTTT-CCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCchHHHHHHHHHHHhcC-CceEEEEecCCCHHHHHHHHHHHHHH
Confidence            4568999999999999999999999999 78877744322 1111 1111111 278999999999999888876     


Q ss_pred             --CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHH----hcCCCEEEEecceeeeecCCCCCCccccCC
Q 023689           80 --GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (278)
Q Consensus        80 --~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~  149 (278)
                        ++|+|||+||.....    ...++++..+++|+.++.++++++.    +.+.++||++||..+..+.+..        
T Consensus       101 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------  172 (269)
T 3gk3_A          101 FGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQ--------  172 (269)
T ss_dssp             HSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTB--------
T ss_pred             cCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCCCc--------
Confidence              689999999976542    2335678899999999998888774    3566799999998877654432        


Q ss_pred             CCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccccc
Q 023689          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (278)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (278)
                                  ..|+.+|.+.+.+.+.++.+   +|+++++++||.+.++.......   ....     ..........
T Consensus       173 ------------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~---~~~~-----~~~~~~~~~~  232 (269)
T 3gk3_A          173 ------------ANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQ---DVLE-----AKILPQIPVG  232 (269)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC---------------CCSGGGCTTS
T ss_pred             ------------chHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhch---hHHH-----HHhhhcCCcC
Confidence                        57999999999888888865   48999999999999987543210   1000     0011111245


Q ss_pred             CcccHHHHHHHHHhhhcCCC--CCce-EEecC
Q 023689          227 GAVPVKDVAKAQVLLFESPA--ASGR-YLCTN  255 (278)
Q Consensus       227 ~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~  255 (278)
                      .+.+++|+|+++++++....  ..|. +++.+
T Consensus       233 ~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdg  264 (269)
T 3gk3_A          233 RLGRPDEVAALIAFLCSDDAGFVTGADLAING  264 (269)
T ss_dssp             SCBCHHHHHHHHHHHTSTTCTTCCSCEEEEST
T ss_pred             CccCHHHHHHHHHHHhCCCcCCeeCcEEEECC
Confidence            67899999999999987654  3464 44443

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.94  E-value=4.9e-26  Score=187.43  Aligned_cols=212  Identities=20%  Similarity=0.204  Sum_probs=157.3

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc--------cCCCCCCCceEEEEccCCChhhHHHH
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF--------ALPGAGDANLRVFEADVLDSGAVSRA   77 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~--------~~~~~~~~~v~~~~~Dl~d~~~~~~~   77 (278)
                      ++++|++|||||+|+||++++++|.++|+ .|++..|+.+..+.+.        .+.... .++.++++|++|+++++++
T Consensus         6 ~l~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~   83 (285)
T 3sc4_A            6 SLRGKTMFISGGSRGIGLAIAKRVAADGA-NVALVAKSAEPHPKLPGTIYTAAKEIEEAG-GQALPIVGDIRDGDAVAAA   83 (285)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHHT-SEEEEEECCTTSHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECChhhhhhhhHHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHHH
Confidence            46789999999999999999999999999 8999999776433221        111111 2789999999999998888


Q ss_pred             hc-------CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHhc----CCCEEEEecceeeeecC-CCC
Q 023689           78 VE-------GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF----GVRRVVVTSSISAIVPN-PGW  141 (278)
Q Consensus        78 ~~-------~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~----~~~~~v~~Ss~~~~~~~-~~~  141 (278)
                      ++       ++|++|||||.....    ...+.++..+++|+.++.++++++...    +.+++|++||..+..+. +. 
T Consensus        84 ~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~-  162 (285)
T 3sc4_A           84 VAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLR-  162 (285)
T ss_dssp             HHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGGSC-
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCCCC-
Confidence            76       789999999976542    233466788999999999999988554    56799999997765442 11 


Q ss_pred             CCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecc-eeeCCCCCCCCchhHHHHHHHhhCC
Q 023689          142 KGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPA-TCLGPLMQPYLNASCAVLQQLLQGS  217 (278)
Q Consensus       142 ~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~-~i~g~~~~~~~~~~~~~~~~~~~~~  217 (278)
                                         ...|+.||.+.+.+.+.++.+   +|+++++++|| .+-++.           ........
T Consensus       163 -------------------~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~-----------~~~~~~~~  212 (285)
T 3sc4_A          163 -------------------PTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAA-----------VQNLLGGD  212 (285)
T ss_dssp             -------------------SHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHH-----------HHHHHTSC
T ss_pred             -------------------CchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHH-----------HHhhcccc
Confidence                               157999999999999988876   58999999998 343331           12222222


Q ss_pred             CCcccccccCcccHHHHHHHHHhhhcCCC-CCceEEecC
Q 023689          218 KDTQEYHWLGAVPVKDVAKAQVLLFESPA-ASGRYLCTN  255 (278)
Q Consensus       218 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~~-~~~~~~~~~  255 (278)
                      .     ....+.+++|+|+++++++.... ..|..+..+
T Consensus       213 ~-----~~~r~~~pedvA~~~~~l~s~~~~~tG~~i~~d  246 (285)
T 3sc4_A          213 E-----AMARSRKPEVYADAAYVVLNKPSSYTGNTLLCE  246 (285)
T ss_dssp             C-----CCTTCBCTHHHHHHHHHHHTSCTTCCSCEEEHH
T ss_pred             c-----cccCCCCHHHHHHHHHHHhCCcccccceEEEEc
Confidence            1     13457799999999999998764 345554443

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.94  E-value=3.1e-26  Score=188.99  Aligned_cols=219  Identities=16%  Similarity=0.139  Sum_probs=155.0

Q ss_pred             cccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCC-CCCcccc-cCCCCCCCceEEEEccCCC----hhhHHHHh
Q 023689            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG-SDSSHLF-ALPGAGDANLRVFEADVLD----SGAVSRAV   78 (278)
Q Consensus         5 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~-~~~~~~~-~~~~~~~~~v~~~~~Dl~d----~~~~~~~~   78 (278)
                      ..+++|++|||||+|+||++++++|+++|+ .|++..|+. +..+.+. .+......++.++.+|++|    ++++.+++
T Consensus        19 ~~l~~k~~lVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~   97 (288)
T 2x9g_A           19 SHMEAPAAVVTGAAKRIGRAIAVKLHQTGY-RVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEII   97 (288)
T ss_dssp             ---CCCEEEETTCSSHHHHHHHHHHHHHTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHH
Confidence            345679999999999999999999999999 898888876 3322221 1110011278899999999    88888776


Q ss_pred             c-------CccEEEEecccCCCCC--------------CCCchhhhhhhHHhHHHHHHHHHHhc----C------CCEEE
Q 023689           79 E-------GCKGVFHVASPCTLED--------------PVDPEKELILPAVQGTLNVLEAAKRF----G------VRRVV  127 (278)
Q Consensus        79 ~-------~~d~vi~~a~~~~~~~--------------~~~~~~~~~~~n~~~~~~ll~~~~~~----~------~~~~v  127 (278)
                      +       ++|+|||+||......              ..+.++..+++|+.++..+++++...    +      .++||
T Consensus        98 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv  177 (288)
T 2x9g_A           98 NSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIV  177 (288)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEE
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEE
Confidence            5       6899999999754321              12345678999999999998887543    2      46899


Q ss_pred             EecceeeeecCCCCCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCc
Q 023689          128 VTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN  204 (278)
Q Consensus       128 ~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~  204 (278)
                      ++||..++.+.+..                    ..|+.+|.+.+.+.+.++.+   +|+++++++||.++++. . .. 
T Consensus       178 ~isS~~~~~~~~~~--------------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~-~~-  234 (288)
T 2x9g_A          178 NLCDAMVDQPCMAF--------------------SLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A-MG-  234 (288)
T ss_dssp             EECCTTTTSCCTTC--------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T-SC-
T ss_pred             EEecccccCCCCCC--------------------chHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c-cC-
Confidence            99997765443321                    57999999999888888765   48999999999999997 3 21 


Q ss_pred             hhHHHHHHHhhCCCCcccccccCc-ccHHHHHHHHHhhhcCCC--CCceEEecC
Q 023689          205 ASCAVLQQLLQGSKDTQEYHWLGA-VPVKDVAKAQVLLFESPA--ASGRYLCTN  255 (278)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~-i~~~D~a~~~~~~~~~~~--~~~~~~~~~  255 (278)
                        ......+....+.      ..+ .+++|+|+++++++....  ..|.++..+
T Consensus       235 --~~~~~~~~~~~p~------~r~~~~pedvA~~v~~l~s~~~~~itG~~i~vd  280 (288)
T 2x9g_A          235 --EEEKDKWRRKVPL------GRREASAEQIADAVIFLVSGSAQYITGSIIKVD  280 (288)
T ss_dssp             --HHHHHHHHHTCTT------TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             --hHHHHHHHhhCCC------CCCCCCHHHHHHHHHHHhCccccCccCCEEEEC
Confidence              1222333333332      234 799999999999987532  346554333

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.94  E-value=3.8e-26  Score=184.49  Aligned_cols=210  Identities=15%  Similarity=0.087  Sum_probs=149.7

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHh---cCcc
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAV---EGCK   82 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~---~~~d   82 (278)
                      .+++|++|||||+|+||++++++|+++|+ .|++..|+.+.   ...+    . .+.++ +|+  .+++++++   .++|
T Consensus        16 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~---~~~~----~-~~~~~-~D~--~~~~~~~~~~~~~iD   83 (249)
T 1o5i_A           16 GIRDKGVLVLAASRGIGRAVADVLSQEGA-EVTICARNEEL---LKRS----G-HRYVV-CDL--RKDLDLLFEKVKEVD   83 (249)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHH---HHHT----C-SEEEE-CCT--TTCHHHHHHHSCCCS
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHH---HHhh----C-CeEEE-eeH--HHHHHHHHHHhcCCC
Confidence            55689999999999999999999999999 89988887622   2222    1 56677 999  33444444   4899


Q ss_pred             EEEEecccCCCC----CCCCchhhhhhhHHhHHHHHH----HHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCch
Q 023689           83 GVFHVASPCTLE----DPVDPEKELILPAVQGTLNVL----EAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDL  154 (278)
Q Consensus        83 ~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll----~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~  154 (278)
                      +|||+||.....    ...++++..+++|+.++.++.    +.+++++.++||++||..++.+.+..             
T Consensus        84 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------------  150 (249)
T 1o5i_A           84 ILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENL-------------  150 (249)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTB-------------
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCCCC-------------
Confidence            999999965431    223467888999998876654    45566677899999998776543321             


Q ss_pred             hhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHH-HHhhCCCCcccccccCccc
Q 023689          155 EYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQ-QLLQGSKDTQEYHWLGAVP  230 (278)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~  230 (278)
                             ..|+.+|...+.+.+.++.+   +|+++++++||.++++......   ..... ......+      ...+++
T Consensus       151 -------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~~~~~~~~~~~p------~~~~~~  214 (249)
T 1o5i_A          151 -------YTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELL---SEEKKKQVESQIP------MRRMAK  214 (249)
T ss_dssp             -------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHS---CHHHHHHHHTTST------TSSCBC
T ss_pred             -------chHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccc---hhhHHHHHHhcCC------CCCCcC
Confidence                   57999999999988888765   5999999999999998632111   11111 2222222      356889


Q ss_pred             HHHHHHHHHhhhcCCC--CCce-EEecCc
Q 023689          231 VKDVAKAQVLLFESPA--ASGR-YLCTNG  256 (278)
Q Consensus       231 ~~D~a~~~~~~~~~~~--~~~~-~~~~~~  256 (278)
                      ++|+|+++++++....  ..|. +.+.++
T Consensus       215 ~~dvA~~i~~l~s~~~~~~tG~~~~vdgG  243 (249)
T 1o5i_A          215 PEEIASVVAFLCSEKASYLTGQTIVVDGG  243 (249)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHHHcCccccCCCCCEEEECCC
Confidence            9999999999987543  2464 455444

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.94  E-value=1e-26  Score=189.89  Aligned_cols=226  Identities=17%  Similarity=0.144  Sum_probs=163.9

Q ss_pred             cccCCceEEEeCcc--hhhHHHHHHHHHHCCCCeEEEEecCCCCC--cccccCCCCCCCceEEEEccCCChhhHHHHhc-
Q 023689            5 AEKEEETVCVTGAN--GFIGTWLVKTLLDNNYTSINATVFPGSDS--SHLFALPGAGDANLRVFEADVLDSGAVSRAVE-   79 (278)
Q Consensus         5 ~~~~~~~vlItGat--G~iG~~l~~~L~~~g~~~v~~~~r~~~~~--~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-   79 (278)
                      ..+++|++|||||+  |+||++++++|+++|+ .|++..|+....  +....+......++.++++|++|+++++++++ 
T Consensus        16 ~~l~~k~vlITGas~~~giG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~   94 (267)
T 3gdg_A           16 LSLKGKVVVVTGASGPKGMGIEAARGCAEMGA-AVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKD   94 (267)
T ss_dssp             HCCTTCEEEETTCCSSSSHHHHHHHHHHHTSC-EEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHH
T ss_pred             cCcCCCEEEEECCCCCCChHHHHHHHHHHCCC-eEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHH
Confidence            35678999999999  9999999999999999 888887765443  22222211111278999999999999888876 


Q ss_pred             ------CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCcc
Q 023689           80 ------GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKV  145 (278)
Q Consensus        80 ------~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~  145 (278)
                            ++|++||+||.....    ...++++..+++|+.++.++++++    ++.+.+++|++||..+..+...     
T Consensus        95 ~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-----  169 (267)
T 3gdg_A           95 VVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFP-----  169 (267)
T ss_dssp             HHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSS-----
T ss_pred             HHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCCC-----
Confidence                  569999999976542    233567889999999999988887    5556679999999777654311     


Q ss_pred             ccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhcC--CceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccc
Q 023689          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHG--VDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (278)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~--~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (278)
                                   .....|+.+|.+.+.+.+.++.+.+  ++++++.||.+.++.....   ............|     
T Consensus       170 -------------~~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~~-----  228 (267)
T 3gdg_A          170 -------------QEQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDFV---PKETQQLWHSMIP-----  228 (267)
T ss_dssp             -------------SCCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGGS---CHHHHHHHHTTST-----
T ss_pred             -------------CCCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhhC---CHHHHHHHHhcCC-----
Confidence                         0125799999999999999988763  8999999999998865432   1222223333332     


Q ss_pred             cccCcccHHHHHHHHHhhhcCCC--CCceEEecCccc
Q 023689          224 HWLGAVPVKDVAKAQVLLFESPA--ASGRYLCTNGIY  258 (278)
Q Consensus       224 ~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~~~~  258 (278)
                       ...+.+++|+|+++++++....  ..|..+..++.+
T Consensus       229 -~~r~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG~  264 (267)
T 3gdg_A          229 -MGRDGLAKELKGAYVYFASDASTYTTGADLLIDGGY  264 (267)
T ss_dssp             -TSSCEETHHHHHHHHHHHSTTCTTCCSCEEEESTTG
T ss_pred             -CCCCcCHHHHHhHhheeecCccccccCCEEEECCce
Confidence             4567899999999999986533  346544434433

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.94  E-value=2e-26  Score=186.02  Aligned_cols=203  Identities=17%  Similarity=0.167  Sum_probs=145.6

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc-------Cc
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~   81 (278)
                      |++|||||+|+||++++++|.++|+ .|++..|+.+..+.+. .+.    .++.++.+|++|+++++++++       ++
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   75 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELG----DNLYIAQLDVRNRAAIEEMLASLPAEWCNI   75 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHC----TTEEEEECCTTCHHHHHHHHHTSCTTTCCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhc----CceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            5899999999999999999999999 8988888764433222 111    178899999999999999876       57


Q ss_pred             cEEEEecccCC-C----CCCCCchhhhhhhHHhHHHHHHHHHH----hcCCCEEEEecceeeeecCCCCCCccccCCCCC
Q 023689           82 KGVFHVASPCT-L----EDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (278)
Q Consensus        82 d~vi~~a~~~~-~----~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~  152 (278)
                      |++||+||... .    +...++++..+++|+.++.++++++.    +++.++||++||..+..+.+..           
T Consensus        76 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~-----------  144 (248)
T 3asu_A           76 DILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGG-----------  144 (248)
T ss_dssp             CEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTC-----------
T ss_pred             CEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCCCCC-----------
Confidence            99999999752 1    22335678899999999988888774    4566899999998775443321           


Q ss_pred             chhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceee-CCCCCCCCchhHHHHHHHhhCCCCcccccccCc
Q 023689          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCL-GPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (278)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (278)
                               ..|+.+|...+.+.+.++.+   +|+++++++||.|. ++.................         ....+
T Consensus       145 ---------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~~~~~~~~~~---------~~~~~  206 (248)
T 3asu_A          145 ---------NVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTY---------QNTVA  206 (248)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC-------------------------------CC
T ss_pred             ---------chHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhcccCchHHHHHHH---------hccCC
Confidence                     57999999999999988875   48999999999999 5643211000000000000         01234


Q ss_pred             ccHHHHHHHHHhhhcCCC
Q 023689          229 VPVKDVAKAQVLLFESPA  246 (278)
Q Consensus       229 i~~~D~a~~~~~~~~~~~  246 (278)
                      ++++|+|+++++++..+.
T Consensus       207 ~~p~dvA~~v~~l~s~~~  224 (248)
T 3asu_A          207 LTPEDVSEAVWWVSTLPA  224 (248)
T ss_dssp             BCHHHHHHHHHHHHHSCT
T ss_pred             CCHHHHHHHHHHHhcCCc
Confidence            699999999999998643

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.94  E-value=1.5e-25  Score=188.89  Aligned_cols=216  Identities=21%  Similarity=0.203  Sum_probs=158.4

Q ss_pred             cccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc--------cCCCCCCCceEEEEccCCChhhH
Q 023689            3 SEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF--------ALPGAGDANLRVFEADVLDSGAV   74 (278)
Q Consensus         3 ~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~--------~~~~~~~~~v~~~~~Dl~d~~~~   74 (278)
                      .|..+++|++|||||+|+||++++++|.++|+ .|++..|+.+..+.+.        .+...+ .++.++.+|++|++++
T Consensus        39 ~~~~l~gk~vlVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g-~~~~~~~~Dv~d~~~v  116 (346)
T 3kvo_A           39 NTGRLAGCTVFITGASRGIGKAIALKAAKDGA-NIVIAAKTAQPHPKLLGTIYTAAEEIEAVG-GKALPCIVDVRDEQQI  116 (346)
T ss_dssp             CCSTTTTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHTT-CEEEEEECCTTCHHHH
T ss_pred             cCCCCCCCEEEEeCCChHHHHHHHHHHHHCCC-EEEEEECChhhhhhhHHHHHHHHHHHHhcC-CeEEEEEccCCCHHHH
Confidence            44567789999999999999999999999999 8999998776533211        111111 2788999999999998


Q ss_pred             HHHhc-------CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCC
Q 023689           75 SRAVE-------GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNP  139 (278)
Q Consensus        75 ~~~~~-------~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~  139 (278)
                      +++++       ++|+||||||.....    ...+.++..+++|+.++.++++++    ++++.++||++||..++.+..
T Consensus       117 ~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~  196 (346)
T 3kvo_A          117 SAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVW  196 (346)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGG
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCC
Confidence            88876       789999999975532    223566889999999999999988    445668999999977654411


Q ss_pred             CCCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc--CCceEEEecce-eeCCCCCCCCchhHHHHHHHhhC
Q 023689          140 GWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPAT-CLGPLMQPYLNASCAVLQQLLQG  216 (278)
Q Consensus       140 ~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~~~~~~lrp~~-i~g~~~~~~~~~~~~~~~~~~~~  216 (278)
                      .                  .....|+.+|...+.+.+.++.+.  +++++++.||. +.++.           .... .+
T Consensus       197 ~------------------~~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T~~-----------~~~~-~~  246 (346)
T 3kvo_A          197 F------------------KQHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHTAA-----------MDML-GG  246 (346)
T ss_dssp             T------------------SSSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCCHH-----------HHHH-CC
T ss_pred             C------------------CCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCccccHH-----------HHhh-cc
Confidence            0                  112579999999999999998774  89999999996 43321           1111 11


Q ss_pred             CCCcccccccCcccHHHHHHHHHhhhcCCC-CCceEEecC
Q 023689          217 SKDTQEYHWLGAVPVKDVAKAQVLLFESPA-ASGRYLCTN  255 (278)
Q Consensus       217 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~-~~~~~~~~~  255 (278)
                      ..     ....+..++|+|+++++++.... ..|.+++.+
T Consensus       247 ~~-----~~~r~~~pedvA~~v~~L~s~~~~itG~~ivdg  281 (346)
T 3kvo_A          247 PG-----IESQCRKVDIIADAAYSIFQKPKSFTGNFVIDE  281 (346)
T ss_dssp             -------CGGGCBCTHHHHHHHHHHHTSCTTCCSCEEEHH
T ss_pred             cc-----ccccCCCHHHHHHHHHHHHhcCCCCCceEEECC
Confidence            11     13456789999999999998722 256665443

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.94  E-value=3.3e-26  Score=189.04  Aligned_cols=220  Identities=15%  Similarity=0.121  Sum_probs=156.8

Q ss_pred             cccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEe-cCCCCCcccc-cCC-CCCCCceEEEEccCCChh-------
Q 023689            3 SEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATV-FPGSDSSHLF-ALP-GAGDANLRVFEADVLDSG-------   72 (278)
Q Consensus         3 ~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~-r~~~~~~~~~-~~~-~~~~~~v~~~~~Dl~d~~-------   72 (278)
                      .|..+++|++|||||+|+||++++++|+++|+ .|++.. |+.+..+... .+. ... .++.++++|++|++       
T Consensus         3 ~m~~l~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~~~~~~~~~~~   80 (291)
T 1e7w_A            3 HMTAPTVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANALSATLNARRP-NSAITVQADLSNVATAPVSGA   80 (291)
T ss_dssp             -----CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHST-TCEEEEECCCSSSCBCCCC--
T ss_pred             CccCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHHhhhcC-CeeEEEEeecCCccccccccc
Confidence            46667789999999999999999999999999 888888 7654332221 111 011 27899999999999       


Q ss_pred             ----------hHHHHhc-------CccEEEEecccCCCCC----C--------------CCchhhhhhhHHhHHHHHHHH
Q 023689           73 ----------AVSRAVE-------GCKGVFHVASPCTLED----P--------------VDPEKELILPAVQGTLNVLEA  117 (278)
Q Consensus        73 ----------~~~~~~~-------~~d~vi~~a~~~~~~~----~--------------~~~~~~~~~~n~~~~~~ll~~  117 (278)
                                ++.++++       ++|++|||||......    .              .+.++..+++|+.++.+++++
T Consensus        81 ~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~  160 (291)
T 1e7w_A           81 DGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKA  160 (291)
T ss_dssp             --CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred             ccccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHH
Confidence                      8888776       6899999999754321    1              345678899999999988887


Q ss_pred             HH----hcC------CCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCC
Q 023689          118 AK----RFG------VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGV  184 (278)
Q Consensus       118 ~~----~~~------~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~  184 (278)
                      +.    +++      .++||++||..+..+.++.                    ..|+.+|...+.+.+.++.+   +|+
T Consensus       161 ~~~~m~~~~~~~~~~~g~Iv~isS~~~~~~~~~~--------------------~~Y~asKaa~~~l~~~la~e~~~~gI  220 (291)
T 1e7w_A          161 FAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGY--------------------TIYTMAKGALEGLTRSAALELAPLQI  220 (291)
T ss_dssp             HHHHHHTSCGGGSCSCEEEEEECCTTTTSCCTTC--------------------HHHHHHHHHHHHHHHHHHHHHGGGTE
T ss_pred             HHHHHHhcCCCCCCCCcEEEEEechhhcCCCCCC--------------------chhHHHHHHHHHHHHHHHHHHHhcCe
Confidence            74    344      5789999997765543322                    57999999999998888765   489


Q ss_pred             ceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccccc-CcccHHHHHHHHHhhhcCCC--CCceEEecC
Q 023689          185 DVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL-GAVPVKDVAKAQVLLFESPA--ASGRYLCTN  255 (278)
Q Consensus       185 ~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~  255 (278)
                      ++++++||.+.++. . . .  ......+....|      .. .+.+++|+|+++++++....  ..|.++..+
T Consensus       221 ~vn~v~PG~v~T~~-~-~-~--~~~~~~~~~~~p------~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vd  283 (291)
T 1e7w_A          221 RVNGVGPGLSVLVD-D-M-P--PAVWEGHRSKVP------LYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVD  283 (291)
T ss_dssp             EEEEEEESSBCCGG-G-S-C--HHHHHHHHTTCT------TTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             EEEEEeeCCccCCc-c-C-C--HHHHHHHHhhCC------CCCCCCCHHHHHHHHHHHhCCcccCccCcEEEEC
Confidence            99999999998886 3 2 1  222333333222      22 46799999999999986532  356554333

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.94  E-value=3.9e-26  Score=183.05  Aligned_cols=189  Identities=17%  Similarity=0.205  Sum_probs=145.9

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc--------
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--------   79 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--------   79 (278)
                      ++|++|||||+|+||++++++|.++|+ .|++..|+.+....          ...++.+|++|++++.++++        
T Consensus         2 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~----------~~~~~~~D~~~~~~~~~~~~~~~~~~~~   70 (236)
T 1ooe_A            2 SSGKVIVYGGKGALGSAILEFFKKNGY-TVLNIDLSANDQAD----------SNILVDGNKNWTEQEQSILEQTASSLQG   70 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCCTTSS----------EEEECCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEecCcccccc----------ccEEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            358999999999999999999999999 89999987654321          46678899999998887765        


Q ss_pred             -CccEEEEecccCCCC-----CCCCchhhhhhhHHhHHHHHHHHHHhc--CCCEEEEecceeeeecCCCCCCccccCCCC
Q 023689           80 -GCKGVFHVASPCTLE-----DPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (278)
Q Consensus        80 -~~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~  151 (278)
                       ++|+|||+||.....     ...+.++..+++|+.++.++++++.+.  ..++||++||..++.+.+..          
T Consensus        71 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~----------  140 (236)
T 1ooe_A           71 SQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPSM----------  140 (236)
T ss_dssp             CCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTB----------
T ss_pred             CCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccCCCCc----------
Confidence             789999999975421     123456888999999999999988664  23589999998776543321          


Q ss_pred             CchhhhhccCchhhhHHHHHHHHHHHHHHhc-----CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccccc
Q 023689          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH-----GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (278)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~-----~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (278)
                                ..|+.+|.+.+.+.+.++.+.     |+++++++||.+.++...           ......      ...
T Consensus       141 ----------~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~-----------~~~~~~------~~~  193 (236)
T 1ooe_A          141 ----------IGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNR-----------KWMPNA------DHS  193 (236)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHH-----------HHSTTC------CGG
T ss_pred             ----------HHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchh-----------hcCCCc------ccc
Confidence                      579999999999999998764     499999999999887411           111111      123


Q ss_pred             CcccHHHHHHHHHhhhcC
Q 023689          227 GAVPVKDVAKAQVLLFES  244 (278)
Q Consensus       227 ~~i~~~D~a~~~~~~~~~  244 (278)
                      .+++++|+|++++.++.+
T Consensus       194 ~~~~~~dvA~~i~~~l~s  211 (236)
T 1ooe_A          194 SWTPLSFISEHLLKWTTE  211 (236)
T ss_dssp             GCBCHHHHHHHHHHHHHC
T ss_pred             ccCCHHHHHHHHHHHHcC
Confidence            467899999999877744

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.94  E-value=2.2e-26  Score=185.94  Aligned_cols=204  Identities=14%  Similarity=0.096  Sum_probs=149.2

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCC--CCCCceEEEEccCCChhhHHHHhc---
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPG--AGDANLRVFEADVLDSGAVSRAVE---   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~--~~~~~v~~~~~Dl~d~~~~~~~~~---   79 (278)
                      .+++|++|||||+|+||++++++|.++|+ .|++..|+.+..+.... +..  ....++.++.+|++|++++.++++   
T Consensus         4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   82 (250)
T 3nyw_A            4 EKQKGLAIITGASQGIGAVIAAGLATDGY-RVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIH   82 (250)
T ss_dssp             -CCCCEEEEESTTSHHHHHHHHHHHHHTC-EEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHH
Confidence            46679999999999999999999999999 89888887654333221 100  011278899999999998888775   


Q ss_pred             ----CccEEEEecccCCCCC---CCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccC
Q 023689           80 ----GCKGVFHVASPCTLED---PVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (278)
Q Consensus        80 ----~~d~vi~~a~~~~~~~---~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E  148 (278)
                          ++|++||+||......   ..+.++..+++|+.++.++++++    ++.+.+++|++||..+..+...        
T Consensus        83 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------  154 (250)
T 3nyw_A           83 QKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFAD--------  154 (250)
T ss_dssp             HHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------CC--------
T ss_pred             HhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCCC--------
Confidence                5899999999754422   22456788999999999888887    4456689999999887654322        


Q ss_pred             CCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc---CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccc
Q 023689          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (278)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (278)
                                  ...|+.+|.+.+.+.+.++.+.   |+++++++||.+.++....           .....      ..
T Consensus       155 ------------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~-----------~~~~~------~~  205 (250)
T 3nyw_A          155 ------------GGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKK-----------AGTPF------KD  205 (250)
T ss_dssp             ------------TTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHH-----------TTCCS------CG
T ss_pred             ------------CcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhh-----------cCCCc------cc
Confidence                        1579999999999988888764   8999999999998763211           11111      13


Q ss_pred             cCcccHHHHHHHHHhhhcCCCC
Q 023689          226 LGAVPVKDVAKAQVLLFESPAA  247 (278)
Q Consensus       226 ~~~i~~~D~a~~~~~~~~~~~~  247 (278)
                      ..+++++|+|+++++++..+..
T Consensus       206 ~~~~~p~dva~~v~~l~s~~~~  227 (250)
T 3nyw_A          206 EEMIQPDDLLNTIRCLLNLSEN  227 (250)
T ss_dssp             GGSBCHHHHHHHHHHHHTSCTT
T ss_pred             ccCCCHHHHHHHHHHHHcCCCc
Confidence            4578999999999999986554

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.94  E-value=2.7e-26  Score=188.56  Aligned_cols=212  Identities=18%  Similarity=0.158  Sum_probs=150.8

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      .+++|++|||||+|+||++++++|.++|+ .|++..|+.+..+.... +.......+.++++|++|++++.++++     
T Consensus        30 ~l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  108 (281)
T 4dry_A           30 SGEGRIALVTGGGTGVGRGIAQALSAEGY-SVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAE  108 (281)
T ss_dssp             ----CEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            45689999999999999999999999999 89999887654332221 111111135899999999999888875     


Q ss_pred             --CccEEEEecccCCC-----CCCCCchhhhhhhHHhHHHHHHHHHH----hcC--CCEEEEecceeeeecCCCCCCccc
Q 023689           80 --GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAK----RFG--VRRVVVTSSISAIVPNPGWKGKVF  146 (278)
Q Consensus        80 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~--~~~~v~~Ss~~~~~~~~~~~~~~~  146 (278)
                        ++|++|||||....     +...++++..+++|+.++.++++++.    +++  .++||++||..+..+.+..     
T Consensus       109 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~-----  183 (281)
T 4dry_A          109 FARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNS-----  183 (281)
T ss_dssp             HSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTTC-----
T ss_pred             cCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCCC-----
Confidence              57999999997543     12345678899999999887777663    333  4689999998876554432     


Q ss_pred             cCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcc-c
Q 023689          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ-E  222 (278)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~-~  222 (278)
                                     ..|+.+|.+.+.+.+.++.+   +|+++++++||.|.++......           .+..... .
T Consensus       184 ---------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~-----------~~~~~~~~~  237 (281)
T 4dry_A          184 ---------------APYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMS-----------TGVLQANGE  237 (281)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC------------------CEEECTTSC
T ss_pred             ---------------hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhc-----------chhhhhhhc
Confidence                           57999999999998888865   5899999999999988643220           0000000 1


Q ss_pred             ccccCcccHHHHHHHHHhhhcCCCCCc
Q 023689          223 YHWLGAVPVKDVAKAQVLLFESPAASG  249 (278)
Q Consensus       223 ~~~~~~i~~~D~a~~~~~~~~~~~~~~  249 (278)
                      .....+++++|+|+++++++.++....
T Consensus       238 ~~~~~~~~pedvA~~v~fL~s~~~~~~  264 (281)
T 4dry_A          238 VAAEPTIPIEHIAEAVVYMASLPLSAN  264 (281)
T ss_dssp             EEECCCBCHHHHHHHHHHHHHSCTTEE
T ss_pred             ccccCCCCHHHHHHHHHHHhCCCccCc
Confidence            123457899999999999999876654

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.94  E-value=4.9e-26  Score=184.57  Aligned_cols=220  Identities=15%  Similarity=0.151  Sum_probs=158.7

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEE-ecCCCCCccc-ccCCCCCCCceEEEEccCCChhhHHHHhcC----
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINAT-VFPGSDSSHL-FALPGAGDANLRVFEADVLDSGAVSRAVEG----   80 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~-~r~~~~~~~~-~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~----   80 (278)
                      +++|++|||||+|+||++++++|+++|+ .|+++ .|+.+..+.. ..+.... .++.++.+|++|.+++.++++.    
T Consensus         5 l~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (255)
T 3icc_A            5 LKGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEEAEETVYEIQSNG-GSAFSIGANLESLHGVEALYSSLDNE   82 (255)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCSHHHHHHHHHHHHTT-CEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHHHHHhcC-CceEEEecCcCCHHHHHHHHHHHHHH
Confidence            5678999999999999999999999999 77765 4444332221 1111112 2788999999999888877652    


Q ss_pred             ---------ccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHhc--CCCEEEEecceeeeecCCCCCCcc
Q 023689           81 ---------CKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKV  145 (278)
Q Consensus        81 ---------~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~  145 (278)
                               +|++||+||.....    ...+.++..+++|+.++.++++++...  +.+++|++||..+..+.+..    
T Consensus        83 ~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~----  158 (255)
T 3icc_A           83 LQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDF----  158 (255)
T ss_dssp             HHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSCCTTB----
T ss_pred             hcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccCCCCc----
Confidence                     89999999975432    233456788999999999999999765  34689999998776554432    


Q ss_pred             ccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccc
Q 023689          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQE  222 (278)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (278)
                                      ..|+.+|.+.+.+.+.++.+   +|+++++++||.+.++........ ...........+    
T Consensus       159 ----------------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~----  217 (255)
T 3icc_A          159 ----------------IAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSD-PMMKQYATTISA----  217 (255)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTS-HHHHHHHHHTST----
T ss_pred             ----------------chhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhccc-HHHHHhhhccCC----
Confidence                            57999999999999888876   489999999999999876543221 111222222222    


Q ss_pred             ccccCcccHHHHHHHHHhhhcCCC--CCceE-EecC
Q 023689          223 YHWLGAVPVKDVAKAQVLLFESPA--ASGRY-LCTN  255 (278)
Q Consensus       223 ~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~-~~~~  255 (278)
                        ...+.+++|+|+++++++....  ..|.. .+.+
T Consensus       218 --~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdg  251 (255)
T 3icc_A          218 --FNRLGEVEDIADTAAFLASPDSRWVTGQLIDVSG  251 (255)
T ss_dssp             --TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             --cCCCCCHHHHHHHHHHHhCcccCCccCCEEEecC
Confidence              3567899999999999886533  34654 4443

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.94  E-value=8e-26  Score=182.86  Aligned_cols=188  Identities=14%  Similarity=0.179  Sum_probs=147.7

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc-------
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------   79 (278)
                      ..+|++|||||+|+||++++++|+++|+ .|+++.|+.+...            -..+.+|++|.++++++++       
T Consensus        20 ~m~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~------------~~~~~~d~~d~~~v~~~~~~~~~~~g   86 (251)
T 3orf_A           20 HMSKNILVLGGSGALGAEVVKFFKSKSW-NTISIDFRENPNA------------DHSFTIKDSGEEEIKSVIEKINSKSI   86 (251)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCTTS------------SEEEECSCSSHHHHHHHHHHHHTTTC
T ss_pred             ccCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCccccc------------ccceEEEeCCHHHHHHHHHHHHHHcC
Confidence            3468999999999999999999999999 8999998775432            2356799999999888875       


Q ss_pred             CccEEEEecccCCC-----CCCCCchhhhhhhHHhHHHHHHHHHHhc--CCCEEEEecceeeeecCCCCCCccccCCCCC
Q 023689           80 GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (278)
Q Consensus        80 ~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~  152 (278)
                      ++|+|||+||....     +...++++..+++|+.++.++++++...  ..++||++||..++.+.+..           
T Consensus        87 ~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----------  155 (251)
T 3orf_A           87 KVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRTSGM-----------  155 (251)
T ss_dssp             CEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTB-----------
T ss_pred             CCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCCCCC-----------
Confidence            46999999997543     2223466888999999999999998764  23589999998876554332           


Q ss_pred             chhhhhccCchhhhHHHHHHHHHHHHHHh-----cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccC
Q 023689          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK-----HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (278)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-----~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (278)
                               ..|+.+|.+.+.+.+.++.+     +|+++++++||.+.++..           .......      ....
T Consensus       156 ---------~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~-----------~~~~~~~------~~~~  209 (251)
T 3orf_A          156 ---------IAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTN-----------RKYMSDA------NFDD  209 (251)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHH-----------HHHCTTS------CGGG
T ss_pred             ---------chhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcch-----------hhhcccc------cccc
Confidence                     57999999999999999877     589999999999987641           1112222      2456


Q ss_pred             cccHHHHHHHHHhhhcC
Q 023689          228 AVPVKDVAKAQVLLFES  244 (278)
Q Consensus       228 ~i~~~D~a~~~~~~~~~  244 (278)
                      +++++|+|++++.++.+
T Consensus       210 ~~~~~dva~~i~~l~~~  226 (251)
T 3orf_A          210 WTPLSEVAEKLFEWSTN  226 (251)
T ss_dssp             SBCHHHHHHHHHHHHHC
T ss_pred             cCCHHHHHHHHHHHhcC
Confidence            78999999999999987

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.94  E-value=5.1e-26  Score=185.96  Aligned_cols=205  Identities=20%  Similarity=0.246  Sum_probs=145.3

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhcC-------c
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVEG-------C   81 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~-------~   81 (278)
                      |++|||||+|+||++++++|+++|+ .|++..|+.+..+.+. .+...  .++.++.+|++|+++++++++.       +
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   98 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGW-SLVLTGRREERLQALAGELSAK--TRVLPLTLDVRDRAAMSAAVDNLPEEFATL   98 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTT--SCEEEEECCTTCHHHHHHHHHTCCGGGSSC
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            7999999999999999999999999 8988888764433222 11111  2788999999999999998864       5


Q ss_pred             cEEEEecccCCC-----CCCCCchhhhhhhHHhHHHHHHHHH----HhcCCC-EEEEecceeeeecCCCCCCccccCCCC
Q 023689           82 KGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVR-RVVVTSSISAIVPNPGWKGKVFDETSW  151 (278)
Q Consensus        82 d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~-~~v~~Ss~~~~~~~~~~~~~~~~E~~~  151 (278)
                      |+|||+||....     +...++++..+++|+.++.++++++    ++.+.+ +||++||..++.+.+..          
T Consensus        99 D~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~~~----------  168 (272)
T 2nwq_A           99 RGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGS----------  168 (272)
T ss_dssp             CEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCTTC----------
T ss_pred             CEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCCCC----------
Confidence            999999997542     1223567889999999977766655    455667 99999998775543321          


Q ss_pred             CchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCc
Q 023689          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (278)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (278)
                                ..|+.+|...+.+.+.++.+   +|+++++++||.+.++..................         ...+
T Consensus       169 ----------~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~---------~~~~  229 (272)
T 2nwq_A          169 ----------HVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQARYDKTYA---------GAHP  229 (272)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC-----------------------------CCCC
T ss_pred             ----------chHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccccchHHHHHhhc---------cCCC
Confidence                      57999999999999988865   4899999999999988633210000000000000         1234


Q ss_pred             ccHHHHHHHHHhhhcCCC
Q 023689          229 VPVKDVAKAQVLLFESPA  246 (278)
Q Consensus       229 i~~~D~a~~~~~~~~~~~  246 (278)
                      +.++|+|+++++++..+.
T Consensus       230 ~~pedvA~~v~~l~s~~~  247 (272)
T 2nwq_A          230 IQPEDIAETIFWIMNQPA  247 (272)
T ss_dssp             BCHHHHHHHHHHHHTSCT
T ss_pred             CCHHHHHHHHHHHhCCCc
Confidence            799999999999997643

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.94  E-value=2.9e-26  Score=185.53  Aligned_cols=213  Identities=16%  Similarity=0.105  Sum_probs=157.3

Q ss_pred             cccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCCCCCCceEEEEccC--CChhhHHHHhc--
Q 023689            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADV--LDSGAVSRAVE--   79 (278)
Q Consensus         5 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~~~~Dl--~d~~~~~~~~~--   79 (278)
                      ..+++|++|||||+|+||++++++|+++|+ .|++..|+.+..+.... +......++.++.+|+  +|.+++.++++  
T Consensus         8 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (252)
T 3f1l_A            8 DLLNDRIILVTGASDGIGREAAMTYARYGA-TVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRI   86 (252)
T ss_dssp             TTTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHH
Confidence            356789999999999999999999999999 89888887654332211 1111111678999999  89988888775  


Q ss_pred             -----CccEEEEecccCCC-----CCCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCcc
Q 023689           80 -----GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKV  145 (278)
Q Consensus        80 -----~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~  145 (278)
                           ++|++||+||....     +...++|+..+++|+.++.++++++    ++.+.++||++||..++.+.+..    
T Consensus        87 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~----  162 (252)
T 3f1l_A           87 AVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANW----  162 (252)
T ss_dssp             HHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCTTC----
T ss_pred             HHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCCCC----
Confidence                 68999999997432     2233456889999999999988887    55667899999998876554432    


Q ss_pred             ccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhcC--CceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccc
Q 023689          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHG--VDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (278)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~--~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (278)
                                      ..|+.+|.+.+.+.+.++.+.+  +++++++||.+.++..           .......+     
T Consensus       163 ----------------~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~~-----------~~~~~~~~-----  210 (252)
T 3f1l_A          163 ----------------GAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAMR-----------ASAFPTED-----  210 (252)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSHHH-----------HHHCTTCC-----
T ss_pred             ----------------chhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCchh-----------hhhCCccc-----
Confidence                            5799999999999999988763  9999999999877531           11111111     


Q ss_pred             cccCcccHHHHHHHHHhhhcCCC--CCceE-EecC
Q 023689          224 HWLGAVPVKDVAKAQVLLFESPA--ASGRY-LCTN  255 (278)
Q Consensus       224 ~~~~~i~~~D~a~~~~~~~~~~~--~~~~~-~~~~  255 (278)
                       ...+.+++|+|+++++++....  ..|.. .+.+
T Consensus       211 -~~~~~~p~dva~~~~~L~s~~~~~itG~~i~vdg  244 (252)
T 3f1l_A          211 -PQKLKTPADIMPLYLWLMGDDSRRKTGMTFDAQP  244 (252)
T ss_dssp             -GGGSBCTGGGHHHHHHHHSGGGTTCCSCEEESSC
T ss_pred             -hhccCCHHHHHHHHHHHcCccccCCCCCEEEeCC
Confidence             2346789999999999987643  34644 4443

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.94  E-value=1.1e-25  Score=181.02  Aligned_cols=192  Identities=13%  Similarity=0.128  Sum_probs=147.5

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc-------
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------   79 (278)
                      .++|++|||||+|+||++++++|+++|+ .|++..|+.+....          ...++.+|++|+++++++++       
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~----------~~~~~~~D~~~~~~v~~~~~~~~~~~~   73 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNW-WVASIDVVENEEAS----------ASVIVKMTDSFTEQADQVTAEVGKLLG   73 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSCCTTSS----------EEEECCCCSCHHHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCChhhccC----------CcEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            3568999999999999999999999999 89999887654321          46778899999998888775       


Q ss_pred             --CccEEEEecccCCCC-----CCCCchhhhhhhHHhHHHHHHHHHHhc--CCCEEEEecceeeeecCCCCCCccccCCC
Q 023689           80 --GCKGVFHVASPCTLE-----DPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (278)
Q Consensus        80 --~~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~  150 (278)
                        ++|+|||+||.....     ...+.++..+++|+.++.++++++.+.  ..++||++||..++.+.+..         
T Consensus        74 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  144 (241)
T 1dhr_A           74 DQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPGM---------  144 (241)
T ss_dssp             TCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTB---------
T ss_pred             CCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCCCCc---------
Confidence              689999999975421     122456788999999999999988664  22689999998776543321         


Q ss_pred             CCchhhhhccCchhhhHHHHHHHHHHHHHHh-----cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccc
Q 023689          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK-----HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (278)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-----~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (278)
                                 ..|+.+|...+.+.+.++.+     +|+++++++||.+.++...           ......      ..
T Consensus       145 -----------~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~-----------~~~~~~------~~  196 (241)
T 1dhr_A          145 -----------IGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNR-----------KSMPEA------DF  196 (241)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHH-----------HHSTTS------CG
T ss_pred             -----------hHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCcccc-----------ccCcch------hh
Confidence                       57999999999999998865     4699999999999876311           111111      12


Q ss_pred             cCcccHHHHHHHHHhhhcCCC
Q 023689          226 LGAVPVKDVAKAQVLLFESPA  246 (278)
Q Consensus       226 ~~~i~~~D~a~~~~~~~~~~~  246 (278)
                      ..+++++|+|+++++++....
T Consensus       197 ~~~~~~~~vA~~v~~l~~~~~  217 (241)
T 1dhr_A          197 SSWTPLEFLVETFHDWITGNK  217 (241)
T ss_dssp             GGSEEHHHHHHHHHHHHTTTT
T ss_pred             ccCCCHHHHHHHHHHHhcCCC
Confidence            346789999999999986543

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.94  E-value=1.2e-25  Score=184.74  Aligned_cols=224  Identities=18%  Similarity=0.120  Sum_probs=159.0

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc------
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~------   79 (278)
                      ++++|++|||||+|+||++++++|.++|+ .|++..|+.+..+.+....  . .++.++.+|++|++++.++++      
T Consensus         2 ~l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~--~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~   77 (281)
T 3zv4_A            2 KLTGEVALITGGASGLGRALVDRFVAEGA-RVAVLDKSAERLRELEVAH--G-GNAVGVVGDVRSLQDQKRAAERCLAAF   77 (281)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHT--B-TTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHc--C-CcEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            46789999999999999999999999999 8988888765443332211  1 278999999999998888775      


Q ss_pred             -CccEEEEecccCCCCCC---------CCchhhhhhhHHhHHHHHHHHHHhc---CCCEEEEecceeeeecCCCCCCccc
Q 023689           80 -GCKGVFHVASPCTLEDP---------VDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKVF  146 (278)
Q Consensus        80 -~~d~vi~~a~~~~~~~~---------~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~v~~Ss~~~~~~~~~~~~~~~  146 (278)
                       ++|++||+||.......         .+.++..+++|+.++.++++++...   +.+++|++||..++.+.+..     
T Consensus        78 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----  152 (281)
T 3zv4_A           78 GKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYPNGGG-----  152 (281)
T ss_dssp             SCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSSSSSC-----
T ss_pred             CCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccCCCCC-----
Confidence             57999999997543111         1236778999999999998887442   23689999998876654432     


Q ss_pred             cCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc--CCceEEEecceeeCCCCCCCCch-hH------HHHHHHhhCC
Q 023689          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQPYLNA-SC------AVLQQLLQGS  217 (278)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~~~~~~lrp~~i~g~~~~~~~~~-~~------~~~~~~~~~~  217 (278)
                                     ..|+.||.+.+.+.+.++.+.  .+++++++||.+.++........ ..      ..........
T Consensus       153 ---------------~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (281)
T 3zv4_A          153 ---------------PLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVL  217 (281)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTC
T ss_pred             ---------------chhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcC
Confidence                           569999999999999988764  39999999999999864322100 00      0112222222


Q ss_pred             CCcccccccCcccHHHHHHHHHhhhcCCC---CCceEEecCcccc
Q 023689          218 KDTQEYHWLGAVPVKDVAKAQVLLFESPA---ASGRYLCTNGIYQ  259 (278)
Q Consensus       218 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~~---~~~~~~~~~~~~s  259 (278)
                      |      ...+.+++|+|+++++++.++.   ..|..+..++.++
T Consensus       218 p------~~r~~~pedvA~~v~fL~s~~~~~~itG~~i~vdGG~~  256 (281)
T 3zv4_A          218 P------IGRMPALEEYTGAYVFFATRGDSLPATGALLNYDGGMG  256 (281)
T ss_dssp             T------TSSCCCGGGGSHHHHHHHSTTTSTTCSSCEEEESSSGG
T ss_pred             C------CCCCCCHHHHHHHHHHhhcccccccccCcEEEECCCCc
Confidence            2      3567899999999999987333   3565544444333

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.93  E-value=3e-25  Score=186.04  Aligned_cols=223  Identities=25%  Similarity=0.192  Sum_probs=153.5

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCC------CCCCCceEEEEccCCChhhHHHHhcC--
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP------GAGDANLRVFEADVLDSGAVSRAVEG--   80 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~------~~~~~~v~~~~~Dl~d~~~~~~~~~~--   80 (278)
                      +|+||||||+|+||++++++|+++|+ .|+++.|+....+......      .....++.++.+|++|++++.++++.  
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~-~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   80 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPS-QSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTT-CCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-ceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence            58999999999999999999999999 6766666544332221110      00112789999999999999999875  


Q ss_pred             ---ccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccCC
Q 023689           81 ---CKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (278)
Q Consensus        81 ---~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~  149 (278)
                         +|+||||||.....    ...++++..+++|+.++.++++++    ++++.++||++||..++.+.+..        
T Consensus        81 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~~~--------  152 (327)
T 1jtv_A           81 EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFN--------  152 (327)
T ss_dssp             TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTC--------
T ss_pred             cCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCCCC--------
Confidence               89999999875431    223467889999999999999885    45567899999998776543321        


Q ss_pred             CCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhH-----------HHHHHHhh
Q 023689          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASC-----------AVLQQLLQ  215 (278)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~-----------~~~~~~~~  215 (278)
                                  ..|+.||.+.+.+.+.++.+   +|+++++++||.|.++..........           ..+.....
T Consensus       153 ------------~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (327)
T 1jtv_A          153 ------------DVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLA  220 (327)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHH
T ss_pred             ------------hHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHHH
Confidence                        57999999999999988874   69999999999999986433211000           00000000


Q ss_pred             CCCCcccccccCcccHHHHHHHHHhhhcCCCCCceEEecC
Q 023689          216 GSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGRYLCTN  255 (278)
Q Consensus       216 ~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~  255 (278)
                      ....  + ..+-..+++|+|+++++++.++.....|+.+.
T Consensus       221 ~~~~--~-~~~~~~~pedvA~~i~~l~~~~~~~~~~~tg~  257 (327)
T 1jtv_A          221 HSKQ--V-FREAAQNPEEVAEVFLTALRAPKPTLRYFTTE  257 (327)
T ss_dssp             HHHH--H-HHHHCBCHHHHHHHHHHHHHCSSCCSEEESCS
T ss_pred             HHHH--h-hhhcCCCHHHHHHHHHHHHcCCCCCeEEEeCc
Confidence            0000  0 00112589999999999998765545666544

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.93  E-value=3.4e-26  Score=184.45  Aligned_cols=206  Identities=17%  Similarity=0.156  Sum_probs=134.0

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHH---HHh---c
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVS---RAV---E   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~---~~~---~   79 (278)
                      ++++|++|||||+|+||++++++|.+ |+ .|+++.|+.+..+.+...     .++.++.+|+++.++..   +.+   .
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~-g~-~v~~~~r~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~   74 (245)
T 3e9n_A            2 SLKKKIAVVTGATGGMGIEIVKDLSR-DH-IVYALGRNPEHLAALAEI-----EGVEPIESDIVKEVLEEGGVDKLKNLD   74 (245)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHTT-TS-EEEEEESCHHHHHHHHTS-----TTEEEEECCHHHHHHTSSSCGGGTTCS
T ss_pred             CCCCCEEEEEcCCCHHHHHHHHHHhC-CC-eEEEEeCCHHHHHHHHhh-----cCCcceecccchHHHHHHHHHHHHhcC
Confidence            35679999999999999999999987 88 888888876554444332     17889999998875421   222   2


Q ss_pred             CccEEEEecccCCCCC----CCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccCCCC
Q 023689           80 GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (278)
Q Consensus        80 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~  151 (278)
                      ++|++||+||......    ..+.++..+++|+.++.++++++    ++.+ +++|++||..++.+.+..          
T Consensus        75 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~----------  143 (245)
T 3e9n_A           75 HVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNGPHPGN----------  143 (245)
T ss_dssp             CCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC----------C----------
T ss_pred             CCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCcccccCCCCc----------
Confidence            6899999999765422    22356788999999988777766    3344 789999998876654432          


Q ss_pred             CchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCc
Q 023689          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (278)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (278)
                                ..|+.+|.+.+.+.+.++.+   +|+++++++||.+.++.......       ......      ....+
T Consensus       144 ----------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-------~~~~~~------~~~~~  200 (245)
T 3e9n_A          144 ----------TIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMD-------SQGTNF------RPEIY  200 (245)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-----------------------------CCGGG
T ss_pred             ----------hHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhhh-------hhhccc------ccccC
Confidence                      57999999999999988875   58999999999999986433210       000111      13457


Q ss_pred             ccHHHHHHHHHhhhcCCCCCceEE
Q 023689          229 VPVKDVAKAQVLLFESPAASGRYL  252 (278)
Q Consensus       229 i~~~D~a~~~~~~~~~~~~~~~~~  252 (278)
                      ++++|+|+++++++.++....+++
T Consensus       201 ~~p~dvA~~i~~l~~~~~~~~~~~  224 (245)
T 3e9n_A          201 IEPKEIANAIRFVIDAGETTQITN  224 (245)
T ss_dssp             SCHHHHHHHHHHHHTSCTTEEEEE
T ss_pred             CCHHHHHHHHHHHHcCCCccceee
Confidence            899999999999998876655554

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.93  E-value=2.3e-25  Score=182.08  Aligned_cols=225  Identities=14%  Similarity=0.082  Sum_probs=156.9

Q ss_pred             ccccCCceEEEeCc--chhhHHHHHHHHHHCCCCeEEEEecCCCCC-cccccCCCCCCCceEEEEccCCChhhHHHHhc-
Q 023689            4 EAEKEEETVCVTGA--NGFIGTWLVKTLLDNNYTSINATVFPGSDS-SHLFALPGAGDANLRVFEADVLDSGAVSRAVE-   79 (278)
Q Consensus         4 m~~~~~~~vlItGa--tG~iG~~l~~~L~~~g~~~v~~~~r~~~~~-~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-   79 (278)
                      |..+++|++|||||  +|+||++++++|.++|+ .|++..|+.+.. +.+....  . .++.++.+|++|+++++++++ 
T Consensus         2 m~~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~--~-~~~~~~~~Dv~~~~~v~~~~~~   77 (269)
T 2h7i_A            2 TGLLDGKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDRLRLIQRITDRL--P-AKAPLLELDVQNEEHLASLAGR   77 (269)
T ss_dssp             CCTTTTCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHTTS--S-SCCCEEECCTTCHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCCCCchHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHhc--C-CCceEEEccCCCHHHHHHHHHH
Confidence            44567899999999  99999999999999999 888888876431 2222111  1 167899999999999888876 


Q ss_pred             ---------CccEEEEecccCCC---------CCCCCchhhhhhhHHhHHHHHHHHHHhc--CCCEEEEecceeeeecCC
Q 023689           80 ---------GCKGVFHVASPCTL---------EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNP  139 (278)
Q Consensus        80 ---------~~d~vi~~a~~~~~---------~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~Ss~~~~~~~~  139 (278)
                               ++|++|||||....         +...++++..+++|+.++.++++++.+.  ..++||++||... ++.+
T Consensus        78 ~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~-~~~~  156 (269)
T 2h7i_A           78 VTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPS-RAMP  156 (269)
T ss_dssp             HHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCS-SCCT
T ss_pred             HHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccc-cccC
Confidence                     78999999997541         2233567888999999999999999654  1258999998554 2221


Q ss_pred             CCCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCC-----Cchh----H
Q 023689          140 GWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPY-----LNAS----C  207 (278)
Q Consensus       140 ~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~-----~~~~----~  207 (278)
                      .                    ...|+.+|...+.+.+.++.+   +|+++++++||.+.++.....     ....    .
T Consensus       157 ~--------------------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  216 (269)
T 2h7i_A          157 A--------------------YNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQ  216 (269)
T ss_dssp             T--------------------THHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHH
T ss_pred             c--------------------hHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHH
Confidence            1                    157999999999998888765   489999999999988642110     0000    0


Q ss_pred             HHHHHHhhCCCCcccccccCcccHHHHHHHHHhhhcCCC--CCceEEecCccc
Q 023689          208 AVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLCTNGIY  258 (278)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~~~~  258 (278)
                      ..........|.     .+.+..++|+|+++++++....  ..|..+..++.+
T Consensus       217 ~~~~~~~~~~p~-----~rr~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  264 (269)
T 2h7i_A          217 LLEEGWDQRAPI-----GWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGA  264 (269)
T ss_dssp             HHHHHHHHHCTT-----CCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTG
T ss_pred             HHHHhhhccCCc-----ccCCCCHHHHHHHHHHHhCchhccCcceEEEecCCe
Confidence            011112122221     1146789999999999987543  346554444333

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.93  E-value=9.4e-26  Score=182.80  Aligned_cols=215  Identities=11%  Similarity=0.064  Sum_probs=146.3

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHh-------cCc
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAV-------EGC   81 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~-------~~~   81 (278)
                      ||++|||||+|+||++++++|+++|+ .|++..|+.+..+.+..+..... ++..+  |..   ++++++       .++
T Consensus         1 Mk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~-~~~~~--d~~---~v~~~~~~~~~~~g~i   73 (254)
T 1zmt_A            1 MSTAIVTNVKHFGGMGSALRLSEAGH-TVACHDESFKQKDELEAFAETYP-QLKPM--SEQ---EPAELIEAVTSAYGQV   73 (254)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHCT-TSEEC--CCC---SHHHHHHHHHHHHSCC
T ss_pred             CeEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCC-cEEEE--CHH---HHHHHHHHHHHHhCCC
Confidence            57899999999999999999999999 89998887655433322111011 34333  443   444433       378


Q ss_pred             cEEEEecccC-CC----CCCCCchhhhhhhHHhHHHHHHHHHH----hcCCCEEEEecceeeeecCCCCCCccccCCCCC
Q 023689           82 KGVFHVASPC-TL----EDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (278)
Q Consensus        82 d~vi~~a~~~-~~----~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~  152 (278)
                      |+|||+||.. ..    +...++++..+++|+.++.++++++.    +++.++||++||..++.+.+..           
T Consensus        74 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----------  142 (254)
T 1zmt_A           74 DVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKEL-----------  142 (254)
T ss_dssp             CEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTC-----------
T ss_pred             CEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCCCc-----------
Confidence            9999999976 32    12334678899999999999888773    4566899999997775543321           


Q ss_pred             chhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCch-----hHHHHHHHhhCCCCccccc
Q 023689          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNA-----SCAVLQQLLQGSKDTQEYH  224 (278)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~  224 (278)
                               ..|+.+|.+.+.+.+.++.+   +|+++++++||.++|+........     ............+      
T Consensus       143 ---------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~~p------  207 (254)
T 1zmt_A          143 ---------STYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTA------  207 (254)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSS------
T ss_pred             ---------hHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHHHhccCC------
Confidence                     57999999999999888865   489999999999988764433111     0111112212112      


Q ss_pred             ccCcccHHHHHHHHHhhhcCCCC--CceE-EecCc
Q 023689          225 WLGAVPVKDVAKAQVLLFESPAA--SGRY-LCTNG  256 (278)
Q Consensus       225 ~~~~i~~~D~a~~~~~~~~~~~~--~~~~-~~~~~  256 (278)
                      ...+.+++|+|+++++++.....  .|.+ .+.++
T Consensus       208 ~~~~~~p~dvA~~v~~l~s~~~~~~tG~~~~vdgG  242 (254)
T 1zmt_A          208 LQRLGTQKELGELVAFLASGSCDYLTGQVFWLAGG  242 (254)
T ss_dssp             SSSCBCHHHHHHHHHHHHTTSCGGGTTCEEEESTT
T ss_pred             CCCCcCHHHHHHHHHHHhCcccCCccCCEEEECCC
Confidence            23578999999999999876432  4654 44433

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.93  E-value=4.4e-25  Score=180.80  Aligned_cols=212  Identities=17%  Similarity=0.190  Sum_probs=153.4

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc--------CCCCCCCceEEEEccCCChhhHHHH
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA--------LPGAGDANLRVFEADVLDSGAVSRA   77 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~--------~~~~~~~~v~~~~~Dl~d~~~~~~~   77 (278)
                      ++++|++|||||+|+||++++++|.++|+ .|++..|+.+..+.+..        +.... .++.++++|++|++++.++
T Consensus         3 ~l~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~   80 (274)
T 3e03_A            3 TLSGKTLFITGASRGIGLAIALRAARDGA-NVAIAAKSAVANPKLPGTIHSAAAAVNAAG-GQGLALKCDIREEDQVRAA   80 (274)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCSCCTTSCCCHHHHHHHHHHHT-SEEEEEECCTTCHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeccchhhhhhHHHHHHHHHHHHhcC-CeEEEEeCCCCCHHHHHHH
Confidence            46789999999999999999999999999 89999987754332211        00011 2788999999999998888


Q ss_pred             hc-------CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHH----hcCCCEEEEecceeeeecCCCCC
Q 023689           78 VE-------GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWK  142 (278)
Q Consensus        78 ~~-------~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~v~~Ss~~~~~~~~~~~  142 (278)
                      ++       ++|++|||||.....    ...+.++..+++|+.++.++++++.    +++.+++|++||..+..+..   
T Consensus        81 ~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~---  157 (274)
T 3e03_A           81 VAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAW---  157 (274)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHH---
T ss_pred             HHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCC---
Confidence            76       689999999975432    2335678899999999999888873    34567999999976654310   


Q ss_pred             CccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecc-eeeCCCCCCCCchhHHHHHHHhhCCC
Q 023689          143 GKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPA-TCLGPLMQPYLNASCAVLQQLLQGSK  218 (278)
Q Consensus       143 ~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~-~i~g~~~~~~~~~~~~~~~~~~~~~~  218 (278)
                                     ......|+.||.+.+.+.+.++.+   +|+++++++|| .+-++...            ...+.+
T Consensus       158 ---------------~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~------------~~~~~~  210 (274)
T 3e03_A          158 ---------------WGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAIN------------MLPGVD  210 (274)
T ss_dssp             ---------------HHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC-------------------CCC
T ss_pred             ---------------CCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhh------------hccccc
Confidence                           111257999999999998888865   48999999999 45555321            111111


Q ss_pred             CcccccccCcccHHHHHHHHHhhhcCCCC--CceEEecC
Q 023689          219 DTQEYHWLGAVPVKDVAKAQVLLFESPAA--SGRYLCTN  255 (278)
Q Consensus       219 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~~~~~~~  255 (278)
                            ...+.+++|+|+++++++.....  .|.++..+
T Consensus       211 ------~~~~~~pedvA~~v~~l~s~~~~~itG~~i~~~  243 (274)
T 3e03_A          211 ------AAACRRPEIMADAAHAVLTREAAGFHGQFLIDD  243 (274)
T ss_dssp             ------GGGSBCTHHHHHHHHHHHTSCCTTCCSCEEEHH
T ss_pred             ------ccccCCHHHHHHHHHHHhCccccccCCeEEEcC
Confidence                  23367899999999999876443  46665433

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.92  E-value=4.2e-25  Score=179.62  Aligned_cols=220  Identities=19%  Similarity=0.135  Sum_probs=147.7

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc------
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~------   79 (278)
                      +++|++|||||+|+||++++++|+++|+ .|++..|+.+..+... .+.... .++.++++|++|++++.++++      
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (260)
T 2qq5_A            3 MNGQVCVVTGASRGIGRGIALQLCKAGA-TVYITGRHLDTLRVVAQEAQSLG-GQCVPVVCDSSQESEVRSLFEQVDREQ   80 (260)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHS-SEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcC-CceEEEECCCCCHHHHHHHHHHHHHhc
Confidence            4578999999999999999999999999 8888888754332221 111111 168899999999988877754      


Q ss_pred             --CccEEEEecc--cC-------C--CCCCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCC
Q 023689           80 --GCKGVFHVAS--PC-------T--LEDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWK  142 (278)
Q Consensus        80 --~~d~vi~~a~--~~-------~--~~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~  142 (278)
                        ++|++||+||  ..       .  .+...+.++..+++|+.++.++.+++    ++++.++||++||..+..+.+   
T Consensus        81 ~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---  157 (260)
T 2qq5_A           81 QGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYMF---  157 (260)
T ss_dssp             TTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSCCS---
T ss_pred             CCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCCCC---
Confidence              4699999994  21       1  12344567889999998887766655    455678999999976643211   


Q ss_pred             CccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCC
Q 023689          143 GKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKD  219 (278)
Q Consensus       143 ~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~  219 (278)
                                        ...|+.+|...+.+.+.++.+   +|+++++++||.+.++...................   
T Consensus       158 ------------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~---  216 (260)
T 2qq5_A          158 ------------------NVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQ---  216 (260)
T ss_dssp             ------------------SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC--------------------
T ss_pred             ------------------CCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccccccchhHHHH---
Confidence                              147999999999999888864   59999999999999986432110000000000000   


Q ss_pred             cccccccCcccHHHHHHHHHhhhcCCCC---CceEEe
Q 023689          220 TQEYHWLGAVPVKDVAKAQVLLFESPAA---SGRYLC  253 (278)
Q Consensus       220 ~~~~~~~~~i~~~D~a~~~~~~~~~~~~---~~~~~~  253 (278)
                       .......+..++|+|+++++++.....   .|.++.
T Consensus       217 -~~~~~~~~~~pe~va~~v~~l~s~~~~~~itG~~i~  252 (260)
T 2qq5_A          217 -FKSAFSSAETTELSGKCVVALATDPNILSLSGKVLP  252 (260)
T ss_dssp             ------CHHHHHHHHHHHHHHHHTCTTGGGGTTCEEE
T ss_pred             -HHhhhccCCCHHHHHHHHHHHhcCcccccccceeec
Confidence             000012246899999999999876532   455443

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.92  E-value=3.5e-25  Score=182.58  Aligned_cols=202  Identities=16%  Similarity=0.081  Sum_probs=148.6

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCCCCCCceEEEEccCCChhhHHHHhc------
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE------   79 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~------   79 (278)
                      +++|++|||||+|+||++++++|+++|+ .|+++.|+.+..+.+.. +...+..++.++.+|++|++++.++++      
T Consensus        26 ~~~k~vlITGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  104 (286)
T 1xu9_A           26 LQGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM  104 (286)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            5678999999999999999999999999 89999887654332211 100011168899999999998888775      


Q ss_pred             -CccEEEEe-cccCCCC---CCCCchhhhhhhHHhHHHHHHHHHHhc---CCCEEEEecceeeeecCCCCCCccccCCCC
Q 023689           80 -GCKGVFHV-ASPCTLE---DPVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (278)
Q Consensus        80 -~~d~vi~~-a~~~~~~---~~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~  151 (278)
                       ++|+|||+ |+.....   ...+.++..+++|+.|+.++++++...   +.++||++||.++..+.+.           
T Consensus       105 g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~-----------  173 (286)
T 1xu9_A          105 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPM-----------  173 (286)
T ss_dssp             TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTT-----------
T ss_pred             CCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccCCCC-----------
Confidence             68999999 5654321   123455788999999999988877442   2479999999777544332           


Q ss_pred             CchhhhhccCchhhhHHHHHHHHHHHHHHhc-----CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccccc
Q 023689          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH-----GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (278)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~-----~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (278)
                               ...|+.||.+.+.+.+.++.+.     ++++++++||.+.++...           ....+      ....
T Consensus       174 ---------~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~-----------~~~~~------~~~~  227 (286)
T 1xu9_A          174 ---------VAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAM-----------KAVSG------IVHM  227 (286)
T ss_dssp             ---------CHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHH-----------HHSCG------GGGG
T ss_pred             ---------ccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHH-----------Hhccc------cccC
Confidence                     2579999999999888877654     899999999998876421           10111      1124


Q ss_pred             CcccHHHHHHHHHhhhcCCC
Q 023689          227 GAVPVKDVAKAQVLLFESPA  246 (278)
Q Consensus       227 ~~i~~~D~a~~~~~~~~~~~  246 (278)
                      .+++++|+|+.++.++..+.
T Consensus       228 ~~~~~~~vA~~i~~~~~~~~  247 (286)
T 1xu9_A          228 QAAPKEECALEIIKGGALRQ  247 (286)
T ss_dssp             GCBCHHHHHHHHHHHHHTTC
T ss_pred             CCCCHHHHHHHHHHHHhcCC
Confidence            57899999999999987654

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.92  E-value=2.6e-25  Score=179.49  Aligned_cols=202  Identities=18%  Similarity=0.156  Sum_probs=150.4

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCCCCCCceEEEEccC--CChhhHHHHhc---
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADV--LDSGAVSRAVE---   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~~~~Dl--~d~~~~~~~~~---   79 (278)
                      .+++|++|||||+|+||++++++|+++|+ .|++..|+.+..+.... +......++.++.+|+  +|.+++.++++   
T Consensus        11 ~l~~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~   89 (247)
T 3i1j_A           11 LLKGRVILVTGAARGIGAAAARAYAAHGA-SVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVE   89 (247)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHH
Confidence            46789999999999999999999999999 89999887654333221 1111112667777777  88888887765   


Q ss_pred             ----CccEEEEecccCCC-----CCCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccc
Q 023689           80 ----GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVF  146 (278)
Q Consensus        80 ----~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~  146 (278)
                          ++|++||+||....     +...++++..+++|+.++.++++++    ++.+.+++|++||..+..+.+..     
T Consensus        90 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~-----  164 (247)
T 3i1j_A           90 HEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANW-----  164 (247)
T ss_dssp             HHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCTTC-----
T ss_pred             HhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCCCc-----
Confidence                68999999997532     1233567889999999999999888    45566799999998776554432     


Q ss_pred             cCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh----cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccc
Q 023689          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK----HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQE  222 (278)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~----~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (278)
                                     ..|+.+|.+.+.+.+.++.+    .++++++++||.+.++..           .......     
T Consensus       165 ---------------~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~-----------~~~~~~~-----  213 (247)
T 3i1j_A          165 ---------------GAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMR-----------AQAYPDE-----  213 (247)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHH-----------HHHSTTS-----
T ss_pred             ---------------chhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccc-----------hhccccc-----
Confidence                           57999999999999988875    479999999998877531           1111111     


Q ss_pred             ccccCcccHHHHHHHHHhhhcCC
Q 023689          223 YHWLGAVPVKDVAKAQVLLFESP  245 (278)
Q Consensus       223 ~~~~~~i~~~D~a~~~~~~~~~~  245 (278)
                       ....+..++|+|+++++++...
T Consensus       214 -~~~~~~~p~dva~~~~~l~s~~  235 (247)
T 3i1j_A          214 -NPLNNPAPEDIMPVYLYLMGPD  235 (247)
T ss_dssp             -CGGGSCCGGGGTHHHHHHHSGG
T ss_pred             -CccCCCCHHHHHHHHHHHhCch
Confidence             1234578999999999998653

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.91  E-value=5e-24  Score=177.59  Aligned_cols=218  Identities=18%  Similarity=0.116  Sum_probs=149.3

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccc-ccCCCCCCCceEEEEccCCCh-hhHHHHhc--
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL-FALPGAGDANLRVFEADVLDS-GAVSRAVE--   79 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~-~~~~~~~~~~v~~~~~Dl~d~-~~~~~~~~--   79 (278)
                      |...++|++|||||+|+||++++++|+++|+ .|++..|+.+..... ..+......++.++.+|++|+ +++.++++  
T Consensus         7 ~~~~~~k~vlITGas~GIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~   85 (311)
T 3o26_A            7 NTVTKRRCAVVTGGNKGIGFEICKQLSSNGI-MVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFI   85 (311)
T ss_dssp             -----CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHH
T ss_pred             CccCCCcEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHH
Confidence            3445678999999999999999999999999 899999876543222 222222223799999999998 77777665  


Q ss_pred             -----CccEEEEecccCCC----------------------------------CCCCCchhhhhhhHHhHHHHHHHHH--
Q 023689           80 -----GCKGVFHVASPCTL----------------------------------EDPVDPEKELILPAVQGTLNVLEAA--  118 (278)
Q Consensus        80 -----~~d~vi~~a~~~~~----------------------------------~~~~~~~~~~~~~n~~~~~~ll~~~--  118 (278)
                           ++|+||||||....                                  ....+.++..+++|+.|+.++++++  
T Consensus        86 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  165 (311)
T 3o26_A           86 KTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIP  165 (311)
T ss_dssp             HHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             HHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhH
Confidence                 78999999997632                                  1122345677999999988888876  


Q ss_pred             --HhcCCCEEEEecceeeeecCCCCCC---ccccCCCCCch--------------------hhhhccCchhhhHHHHHHH
Q 023689          119 --KRFGVRRVVVTSSISAIVPNPGWKG---KVFDETSWTDL--------------------EYCKSRKKWYPVSKTLAEK  173 (278)
Q Consensus       119 --~~~~~~~~v~~Ss~~~~~~~~~~~~---~~~~E~~~~~~--------------------~~~~~~~~~y~~sK~~~e~  173 (278)
                        ++.+.++||++||..+..+......   ...+++.+...                    .........|+.||.+.+.
T Consensus       166 ~l~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~  245 (311)
T 3o26_A          166 LLQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNA  245 (311)
T ss_dssp             HHTTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHH
T ss_pred             hhccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHH
Confidence              4445679999999887654321000   00000000000                    0000123579999999999


Q ss_pred             HHHHHHHhc-CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHHHHHHHHHhhhcCCC
Q 023689          174 AAWEFAEKH-GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA  246 (278)
Q Consensus       174 ~~~~~~~~~-~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~  246 (278)
                      +.+.++++. ++++++++||.|.++.....                        ....+++.|+.++.++..+.
T Consensus       246 ~~~~la~e~~~i~v~~v~PG~v~T~~~~~~------------------------~~~~~~~~a~~~~~~~~~~~  295 (311)
T 3o26_A          246 YTRVLANKIPKFQVNCVCPGLVKTEMNYGI------------------------GNYTAEEGAEHVVRIALFPD  295 (311)
T ss_dssp             HHHHHHHHCTTSEEEEECCCSBCSGGGTTC------------------------CSBCHHHHHHHHHHHHTCCS
T ss_pred             HHHHHHhhcCCceEEEecCCceecCCcCCC------------------------CCCCHHHHHHHHHHHHhCCC
Confidence            999999876 79999999999988753321                        12578899999988876543

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.91  E-value=3.4e-24  Score=186.57  Aligned_cols=213  Identities=17%  Similarity=0.125  Sum_probs=151.9

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc-------
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------   79 (278)
                      +++|++|||||+|+||++++++|.++|+ .|+++.|+.... .+......  .+++++.+|++|.+++.++++       
T Consensus       211 l~gk~~LVTGgsgGIG~aiA~~La~~Ga-~Vvl~~r~~~~~-~l~~~~~~--~~~~~~~~Dvtd~~~v~~~~~~~~~~~g  286 (454)
T 3u0b_A          211 LDGKVAVVTGAARGIGATIAEVFARDGA-TVVAIDVDGAAE-DLKRVADK--VGGTALTLDVTADDAVDKITAHVTEHHG  286 (454)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECGGGHH-HHHHHHHH--HTCEEEECCTTSTTHHHHHHHHHHHHST
T ss_pred             CCCCEEEEeCCchHHHHHHHHHHHHCCC-EEEEEeCCccHH-HHHHHHHH--cCCeEEEEecCCHHHHHHHHHHHHHHcC
Confidence            4678999999999999999999999999 788887754221 11111000  056789999999999888775       


Q ss_pred             C-ccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHhc----CCCEEEEecceeeeecCCCCCCccccCCC
Q 023689           80 G-CKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF----GVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (278)
Q Consensus        80 ~-~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~----~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~  150 (278)
                      + +|+|||+||.....    ...+.++..+++|+.|+.++.+++...    +.++||++||.+++.+.++.         
T Consensus       287 ~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g~---------  357 (454)
T 3u0b_A          287 GKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQ---------  357 (454)
T ss_dssp             TCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTTC---------
T ss_pred             CCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCCC---------
Confidence            3 89999999976542    233567888999999999999998765    56799999998887766543         


Q ss_pred             CCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccC
Q 023689          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (278)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (278)
                                 ..|+.+|...+.+.+.++.+   +|+++++++||.+.++............   .....      ....
T Consensus       358 -----------~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~---~~~~~------~l~r  417 (454)
T 3u0b_A          358 -----------TNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLATREV---GRRLN------SLFQ  417 (454)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC----------CHH---HHHSB------TTSS
T ss_pred             -----------HHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchhhHHH---HHhhc------cccC
Confidence                       57999999888777777754   4999999999999988643321111011   11111      1344


Q ss_pred             cccHHHHHHHHHhhhcCCC--CCceEE
Q 023689          228 AVPVKDVAKAQVLLFESPA--ASGRYL  252 (278)
Q Consensus       228 ~i~~~D~a~~~~~~~~~~~--~~~~~~  252 (278)
                      +..++|+|+++++++....  ..|..+
T Consensus       418 ~g~pedvA~~v~fL~s~~a~~itG~~i  444 (454)
T 3u0b_A          418 GGQPVDVAELIAYFASPASNAVTGNTI  444 (454)
T ss_dssp             CBCHHHHHHHHHHHHCGGGTTCCSCEE
T ss_pred             CCCHHHHHHHHHHHhCCccCCCCCcEE
Confidence            5789999999999986533  346543

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.91  E-value=1.2e-24  Score=175.34  Aligned_cols=209  Identities=12%  Similarity=0.078  Sum_probs=141.2

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEE-e--cCCCCCcccccCCCCCCCceEEEEccCCChhhHHH-Hh---cCc
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINAT-V--FPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSR-AV---EGC   81 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~-~--r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~-~~---~~~   81 (278)
                      ||++|||||+|+||++++++|+++|+ .|++. .  |+.+..+.+.....    +....  |..+.+.+.+ +.   .++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~r~~~~~~~~~~~~~----~~~~~--~~~~v~~~~~~~~~~~g~i   73 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGY-TVVCHDASFADAAERQRFESENP----GTIAL--AEQKPERLVDATLQHGEAI   73 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHST----TEEEC--CCCCGGGHHHHHGGGSSCE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCcCCHHHHHHHHHHhC----CCccc--CHHHHHHHHHHHHHHcCCC
Confidence            57999999999999999999999999 88888 5  76544332221100    22221  3333332222 22   268


Q ss_pred             cEEEEecccCCC-------CCCCCchhhhhhhHHhHHHHHHHHHH----hcCCCEEEEecceeeeecCCCCCCccccCCC
Q 023689           82 KGVFHVASPCTL-------EDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (278)
Q Consensus        82 d~vi~~a~~~~~-------~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~  150 (278)
                      |+|||+||....       +...++++..+++|+.++.++++++.    +++.++||++||..++.+.+..         
T Consensus        74 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~---------  144 (244)
T 1zmo_A           74 DTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAYN---------  144 (244)
T ss_dssp             EEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTC---------
T ss_pred             CEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCCCc---------
Confidence            999999996543       12234678899999999998888774    4566899999998776544332         


Q ss_pred             CCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCC---CCCCchhHHHHHHHhh-CCCCcccc
Q 023689          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLM---QPYLNASCAVLQQLLQ-GSKDTQEY  223 (278)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~---~~~~~~~~~~~~~~~~-~~~~~~~~  223 (278)
                                 ..|+.+|.+.+.+.+.++.+   +|+++++++||.+.++..   ....  .......... ..|     
T Consensus       145 -----------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~--~~~~~~~~~~~~~p-----  206 (244)
T 1zmo_A          145 -----------PLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWE--NNPELRERVDRDVP-----  206 (244)
T ss_dssp             -----------TTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHH--HCHHHHHHHHHHCT-----
T ss_pred             -----------hHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccccccc--chHHHHHHHhcCCC-----
Confidence                       57999999999998888765   489999999999988864   2110  0011122221 122     


Q ss_pred             cccCcccHHHHHHHHHhhhcCCC--CCceEE
Q 023689          224 HWLGAVPVKDVAKAQVLLFESPA--ASGRYL  252 (278)
Q Consensus       224 ~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~  252 (278)
                       ...+.+++|+|+++++++....  ..|.++
T Consensus       207 -~~r~~~pe~vA~~v~~l~s~~~~~~tG~~i  236 (244)
T 1zmo_A          207 -LGRLGRPDEMGALITFLASRRAAPIVGQFF  236 (244)
T ss_dssp             -TCSCBCHHHHHHHHHHHHTTTTGGGTTCEE
T ss_pred             -CCCCcCHHHHHHHHHHHcCccccCccCCEE
Confidence             2357899999999999987543  246544

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.91  E-value=6.1e-24  Score=172.63  Aligned_cols=211  Identities=17%  Similarity=0.116  Sum_probs=150.3

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHH---CCCCeEEEEecCCCCCcccc-cCCCC-CCCceEEEEccCCChhhHHHHhc--
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLD---NNYTSINATVFPGSDSSHLF-ALPGA-GDANLRVFEADVLDSGAVSRAVE--   79 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~---~g~~~v~~~~r~~~~~~~~~-~~~~~-~~~~v~~~~~Dl~d~~~~~~~~~--   79 (278)
                      +++|++|||||+|+||++++++|.+   +|+ .|++..|+.+..+.+. .+... ...++.++.+|++|++++.++++  
T Consensus         4 l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   82 (259)
T 1oaa_A            4 LGCAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CBSEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHhhcCCC-eEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHH
Confidence            4578999999999999999999999   899 8988888764433221 11100 01268899999999998887764  


Q ss_pred             -------Ccc--EEEEecccCCC------C-CCCCchhhhhhhHHhHHHHHHHHHHhc------CCCEEEEecceeeeec
Q 023689           80 -------GCK--GVFHVASPCTL------E-DPVDPEKELILPAVQGTLNVLEAAKRF------GVRRVVVTSSISAIVP  137 (278)
Q Consensus        80 -------~~d--~vi~~a~~~~~------~-~~~~~~~~~~~~n~~~~~~ll~~~~~~------~~~~~v~~Ss~~~~~~  137 (278)
                             ++|  ++||+||....      + ...++++..+++|+.++.++++++...      +.++||++||..++.+
T Consensus        83 ~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~  162 (259)
T 1oaa_A           83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP  162 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC
T ss_pred             HhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCC
Confidence                   357  99999997432      1 233567889999999999999988543      3467999999877654


Q ss_pred             CCCCCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc-CCceEEEecceeeCCCCCCCCc--hhHHHHHHHh
Q 023689          138 NPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH-GVDVVAIHPATCLGPLMQPYLN--ASCAVLQQLL  214 (278)
Q Consensus       138 ~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~-~~~~~~lrp~~i~g~~~~~~~~--~~~~~~~~~~  214 (278)
                      .+..                    ..|+.+|...+.+.+.++.+. ++++++++||.+.++.......  ..........
T Consensus       163 ~~~~--------------------~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  222 (259)
T 1oaa_A          163 YKGW--------------------GLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQ  222 (259)
T ss_dssp             CTTC--------------------HHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHH
T ss_pred             CCCc--------------------cHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcchHHHHhhccCChhHHHHHH
Confidence            3322                    579999999999999998875 5999999999887764211000  0001111111


Q ss_pred             hCCCCcccccccCcccHHHHHHHHHhhhcC
Q 023689          215 QGSKDTQEYHWLGAVPVKDVAKAQVLLFES  244 (278)
Q Consensus       215 ~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~  244 (278)
                      ...      ....+.+++|+|+++++++..
T Consensus       223 ~~~------p~~~~~~p~dvA~~v~~l~~~  246 (259)
T 1oaa_A          223 KLK------SDGALVDCGTSAQKLLGLLQK  246 (259)
T ss_dssp             HHH------HTTCSBCHHHHHHHHHHHHHH
T ss_pred             Hhh------hcCCcCCHHHHHHHHHHHHhh
Confidence            111      134578999999999999864

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.91  E-value=4.6e-23  Score=181.00  Aligned_cols=225  Identities=20%  Similarity=0.185  Sum_probs=161.9

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccc----ccCCCCCCCceEEEEccCCChhhHHHHhcCc--
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL----FALPGAGDANLRVFEADVLDSGAVSRAVEGC--   81 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~----~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~--   81 (278)
                      .++++|||||+|+||++++++|.++|++.|+++.|+.......    ..+...+ .++.++.+|++|++++.++++.+  
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g-~~v~~~~~Dv~d~~~v~~~~~~i~~  303 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALG-ARTTVAACDVTDRESVRELLGGIGD  303 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTT-CEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcC-CEEEEEEeCCCCHHHHHHHHHHHHh
Confidence            3689999999999999999999999995588888876432111    1111112 27899999999999999998764  


Q ss_pred             ----cEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCc
Q 023689           82 ----KGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (278)
Q Consensus        82 ----d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~  153 (278)
                          |+|||+||.....    ...+.++..+++|+.|+.++.++++..+.++||++||.+++++.++.            
T Consensus       304 ~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~g~~g~------------  371 (486)
T 2fr1_A          304 DVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPGL------------  371 (486)
T ss_dssp             TSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTTC------------
T ss_pred             cCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcCCCCCC------------
Confidence                9999999975532    12345678899999999999999998888999999998887765542            


Q ss_pred             hhhhhccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHHH
Q 023689          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKD  233 (278)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  233 (278)
                              ..|+.+|...+.+...+. ..|+++++++||.+.++.....     .. ...       .......+++++|
T Consensus       372 --------~~Yaaaka~l~~la~~~~-~~gi~v~~i~pG~~~~~gm~~~-----~~-~~~-------~~~~g~~~i~~e~  429 (486)
T 2fr1_A          372 --------GGYAPGNAYLDGLAQQRR-SDGLPATAVAWGTWAGSGMAEG-----PV-ADR-------FRRHGVIEMPPET  429 (486)
T ss_dssp             --------TTTHHHHHHHHHHHHHHH-HTTCCCEEEEECCBC-------------------------CTTTTEECBCHHH
T ss_pred             --------HHHHHHHHHHHHHHHHHH-hcCCeEEEEECCeeCCCcccch-----hH-HHH-------HHhcCCCCCCHHH
Confidence                    579999999998877665 5699999999999987642211     00 000       1112346799999


Q ss_pred             HHHHHHhhhcCCCCCceEEecCccccHHHHHHHHHHhC
Q 023689          234 VAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLF  271 (278)
Q Consensus       234 ~a~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~  271 (278)
                      +++++..++.+....  +++.  .+.|..+...+....
T Consensus       430 ~a~~l~~~l~~~~~~--~~v~--~~d~~~~~~~~~~~~  463 (486)
T 2fr1_A          430 ACRALQNALDRAEVC--PIVI--DVRWDRFLLAYTAQR  463 (486)
T ss_dssp             HHHHHHHHHHTTCSS--CEEC--EECHHHHHHHHTSSS
T ss_pred             HHHHHHHHHhCCCCe--EEEE--eCCHHHHhhhhcccC
Confidence            999999999875432  2222  256777666554433

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.90  E-value=5.9e-24  Score=177.44  Aligned_cols=201  Identities=18%  Similarity=0.119  Sum_probs=142.6

Q ss_pred             CccccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecC---------CCCCccc-ccCCCCCCCceEEEEccCCC
Q 023689            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFP---------GSDSSHL-FALPGAGDANLRVFEADVLD   70 (278)
Q Consensus         1 m~~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~---------~~~~~~~-~~~~~~~~~~v~~~~~Dl~d   70 (278)
                      |++...+++|++|||||+|+||+++++.|.++|+ .|++.++.         .+..+.. ..+...   .. ...+|++|
T Consensus         1 M~~~~~l~gk~~lVTGas~GIG~~~a~~La~~Ga-~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~---~~-~~~~D~~~   75 (319)
T 1gz6_A            1 MASPLRFDGRVVLVTGAGGGLGRAYALAFAERGA-LVVVNDLGGDFKGVGKGSSAADKVVEEIRRR---GG-KAVANYDS   75 (319)
T ss_dssp             --CCCCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSCBCCSHHHHHHHHHHHHT---TC-EEEEECCC
T ss_pred             CCCCCCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCcccccccCCHHHHHHHHHHHHhh---CC-eEEEeCCC
Confidence            5544467789999999999999999999999999 78876542         2111111 111111   11 23489999


Q ss_pred             hhhHHHHhc-------CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeee
Q 023689           71 SGAVSRAVE-------GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAI  135 (278)
Q Consensus        71 ~~~~~~~~~-------~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~  135 (278)
                      .+++.++++       ++|+||||||.....    ...+.++..+++|+.|+.++++++    ++++.++||++||..+.
T Consensus        76 ~~~~~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~  155 (319)
T 1gz6_A           76 VEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGI  155 (319)
T ss_dssp             GGGHHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhc
Confidence            987766653       689999999975532    233567889999999988888876    44567899999998777


Q ss_pred             ecCCCCCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHH
Q 023689          136 VPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQ  212 (278)
Q Consensus       136 ~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~  212 (278)
                      ++.+..                    ..|+.||...+.+.+.++.+   +|+++++++||.+ ++......  ..     
T Consensus       156 ~~~~~~--------------------~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~~~--~~-----  207 (319)
T 1gz6_A          156 YGNFGQ--------------------ANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTETVM--PE-----  207 (319)
T ss_dssp             HCCTTC--------------------HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGGGS--CH-----
T ss_pred             cCCCCC--------------------HHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccccccC--Ch-----
Confidence            664432                    57999999999999888875   4899999999987 54321110  00     


Q ss_pred             HhhCCCCcccccccCcccHHHHHHHHHhhhcCC
Q 023689          213 LLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP  245 (278)
Q Consensus       213 ~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  245 (278)
                                 ....+++++|+|.++++++..+
T Consensus       208 -----------~~~~~~~p~dvA~~~~~l~s~~  229 (319)
T 1gz6_A          208 -----------DLVEALKPEYVAPLVLWLCHES  229 (319)
T ss_dssp             -----------HHHHHSCGGGTHHHHHHHTSTT
T ss_pred             -----------hhhccCCHHHHHHHHHHHhCch
Confidence                       1123468899999999988754

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.90  E-value=1.8e-22  Score=177.98  Aligned_cols=224  Identities=19%  Similarity=0.149  Sum_probs=162.4

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccc----ccCCCCCCCceEEEEccCCChhhHHHHhcC--c
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL----FALPGAGDANLRVFEADVLDSGAVSRAVEG--C   81 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~----~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~--~   81 (278)
                      .+++||||||+|+||++++++|.++|+..|+++.|+.......    ..+...+ .+++++.+|++|.+++.++++.  +
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g-~~v~~~~~Dvtd~~~v~~~~~~~~l  336 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHG-CEVVHAACDVAERDALAALVTAYPP  336 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTT-CEEEEEECCSSCHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcC-CEEEEEEeCCCCHHHHHHHHhcCCC
Confidence            3689999999999999999999999996688888875332111    1122112 2789999999999999999975  9


Q ss_pred             cEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHhc-CCCEEEEecceeeeecCCCCCCccccCCCCCchhh
Q 023689           82 KGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF-GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEY  156 (278)
Q Consensus        82 d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~  156 (278)
                      |+|||+||.....    ...+.++..+++|+.|+.++.+++... +.++||++||.+++++.++.               
T Consensus       337 d~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~~g~---------------  401 (511)
T 2z5l_A          337 NAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGNAGQ---------------  401 (511)
T ss_dssp             SEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCCTTB---------------
T ss_pred             cEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCCCCC---------------
Confidence            9999999976542    122356778899999999999999876 78899999998887665442               


Q ss_pred             hhccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHHHHHH
Q 023689          157 CKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAK  236 (278)
Q Consensus       157 ~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  236 (278)
                           ..|+.+|...+.+.+.+. ..|+++++++||.+........  ....   .+..        ....+++++|+++
T Consensus       402 -----~~YaaaKa~ld~la~~~~-~~gi~v~sv~pG~~~~tgm~~~--~~~~---~~~~--------~g~~~l~~e~~a~  462 (511)
T 2z5l_A          402 -----GAYAAANAALDALAERRR-AAGLPATSVAWGLWGGGGMAAG--AGEE---SLSR--------RGLRAMDPDAAVD  462 (511)
T ss_dssp             -----HHHHHHHHHHHHHHHHHH-TTTCCCEEEEECCBCSTTCCCC--HHHH---HHHH--------HTBCCBCHHHHHH
T ss_pred             -----HHHHHHHHHHHHHHHHHH-HcCCcEEEEECCcccCCccccc--ccHH---HHHh--------cCCCCCCHHHHHH
Confidence                 579999999999988764 6699999999998843222111  1111   1111        1245689999999


Q ss_pred             HHHhhhcCCCCCceEEecCccccHHHHHHHHHHh
Q 023689          237 AQVLLFESPAASGRYLCTNGIYQFGDFAERVSKL  270 (278)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~  270 (278)
                      ++..++.++..  ..++.  .+.|..+...+...
T Consensus       463 ~l~~al~~~~~--~v~v~--~~d~~~~~~~~~~~  492 (511)
T 2z5l_A          463 ALLGAMGRNDV--CVTVV--DVDWERFAPATNAI  492 (511)
T ss_dssp             HHHHHHHHTCS--EEEEC--CBCHHHHHHHHHHH
T ss_pred             HHHHHHhCCCC--EEEEE--eCCHHHHHhhhccc
Confidence            99999986543  23333  34566666655543

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.90  E-value=6.2e-22  Score=163.95  Aligned_cols=224  Identities=14%  Similarity=0.099  Sum_probs=148.9

Q ss_pred             ccCCceEEEeCcc--hhhHHHHHHHHHHCCCCeEEEEecC-----------CCCCcccccCCCCC-CCceEEEEcc----
Q 023689            6 EKEEETVCVTGAN--GFIGTWLVKTLLDNNYTSINATVFP-----------GSDSSHLFALPGAG-DANLRVFEAD----   67 (278)
Q Consensus         6 ~~~~~~vlItGat--G~iG~~l~~~L~~~g~~~v~~~~r~-----------~~~~~~~~~~~~~~-~~~v~~~~~D----   67 (278)
                      .+++|++|||||+  |+||++++++|.++|+ .|++..|+           .+..+....+.... ......+.+|    
T Consensus         5 ~l~~k~~lVTGas~~~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (297)
T 1d7o_A            5 DLRGKRAFIAGIADDNGYGWAVAKSLAAAGA-EILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFD   83 (297)
T ss_dssp             CCTTCEEEEECCSSSSSHHHHHHHHHHHTTC-EEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCC
T ss_pred             ccCCCEEEEECCCCCCChHHHHHHHHHHCCC-eEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceecc
Confidence            3667999999999  9999999999999999 78877643           22222222221100 0012333333    


Q ss_pred             ----CC----C--------hhhHHHHhc-------CccEEEEecccCC--C----CCCCCchhhhhhhHHhHHHHHHHHH
Q 023689           68 ----VL----D--------SGAVSRAVE-------GCKGVFHVASPCT--L----EDPVDPEKELILPAVQGTLNVLEAA  118 (278)
Q Consensus        68 ----l~----d--------~~~~~~~~~-------~~d~vi~~a~~~~--~----~~~~~~~~~~~~~n~~~~~~ll~~~  118 (278)
                          +.    |        +++++++++       ++|++|||||...  .    +...++++..+++|+.++.++++++
T Consensus        84 ~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~  163 (297)
T 1d7o_A           84 NPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHF  163 (297)
T ss_dssp             SGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             chhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHH
Confidence                22    2        445555543       6899999998632  1    2234567889999999999999999


Q ss_pred             Hhc--CCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh----cCCceEEEecc
Q 023689          119 KRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK----HGVDVVAIHPA  192 (278)
Q Consensus       119 ~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~----~~~~~~~lrp~  192 (278)
                      ...  ..+++|++||..+..+.+..                   ...|+.+|.+.+.+.+.++.+    +|+++++++||
T Consensus       164 ~~~m~~~g~iv~isS~~~~~~~~~~-------------------~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG  224 (297)
T 1d7o_A          164 LPIMNPGGASISLTYIASERIIPGY-------------------GGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAG  224 (297)
T ss_dssp             GGGEEEEEEEEEEECGGGTSCCTTC-------------------TTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEC
T ss_pred             HHHhccCceEEEEeccccccCCCCc-------------------chHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEecc
Confidence            764  12689999997775543321                   036999999999988888764    59999999999


Q ss_pred             eeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHHHHHHHHHhhhcCCC--CCceE-EecCc
Q 023689          193 TCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRY-LCTNG  256 (278)
Q Consensus       193 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~-~~~~~  256 (278)
                      .+.++..... ..............|      ...+.+++|+|+++++++....  ..|.+ .+.++
T Consensus       225 ~v~T~~~~~~-~~~~~~~~~~~~~~p------~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG  284 (297)
T 1d7o_A          225 PLGSRAAKAI-GFIDTMIEYSYNNAP------IQKTLTADEVGNAAAFLVSPLASAITGATIYVDNG  284 (297)
T ss_dssp             CCBCCCSSCC-SHHHHHHHHHHHHSS------SCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             ccccchhhhc-cccHHHHHHhhccCC------CCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            9999975442 122223333333223      2346799999999999886532  24654 44333

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.88  E-value=4.7e-22  Score=166.30  Aligned_cols=233  Identities=14%  Similarity=0.072  Sum_probs=127.6

Q ss_pred             CccccccCCceEEEeCc--chhhHHHHHHHHHHCCCCeEEEEecCC-----------CCCccc------------ccCCC
Q 023689            1 MASEAEKEEETVCVTGA--NGFIGTWLVKTLLDNNYTSINATVFPG-----------SDSSHL------------FALPG   55 (278)
Q Consensus         1 m~~m~~~~~~~vlItGa--tG~iG~~l~~~L~~~g~~~v~~~~r~~-----------~~~~~~------------~~~~~   55 (278)
                      |..| .+++|++|||||  +|+||++++++|+++|+ .|++..|++           +..+..            ..+..
T Consensus         2 m~~~-~l~~k~~lVTGa~~s~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (319)
T 2ptg_A            2 PLPV-DLRGKTAFVAGVADSNGYGWAICKLLRAAGA-RVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAE   79 (319)
T ss_dssp             CCCC-CCTTCEEEEECCCCTTSHHHHHHHHHHHTTC-EEEEEECHHHHHHHHC---------------------------
T ss_pred             Cccc-ccCCCEEEEeCCCCCCcHHHHHHHHHHHCCC-EEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhh
Confidence            4334 366799999999  89999999999999999 788876531           111110            01110


Q ss_pred             CCC--CceEEEEcc------------CCC--------hhhHHHHhc-------CccEEEEecccCC--C----CCCCCch
Q 023689           56 AGD--ANLRVFEAD------------VLD--------SGAVSRAVE-------GCKGVFHVASPCT--L----EDPVDPE  100 (278)
Q Consensus        56 ~~~--~~v~~~~~D------------l~d--------~~~~~~~~~-------~~d~vi~~a~~~~--~----~~~~~~~  100 (278)
                      ...  ....++.+|            ++|        ++++.++++       ++|++|||||...  .    +...+.+
T Consensus        80 ~~~~~~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~  159 (319)
T 2ptg_A           80 KPVDLVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGY  159 (319)
T ss_dssp             -----CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHH
T ss_pred             ccccccccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHH
Confidence            000  012444444            232        335555543       6899999998642  1    2234567


Q ss_pred             hhhhhhHHhHHHHHHHHHHhc--CCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHH
Q 023689          101 KELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEF  178 (278)
Q Consensus       101 ~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~  178 (278)
                      +..+++|+.++.++++++...  ..++||++||..+..+.+..                   ...|+.+|...+.+.+.+
T Consensus       160 ~~~~~vN~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~-------------------~~~Y~asKaal~~l~~~l  220 (319)
T 2ptg_A          160 LAAVSSSSYSFVSLLQHFLPLMKEGGSALALSYIASEKVIPGY-------------------GGGMSSAKAALESDCRTL  220 (319)
T ss_dssp             HHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEEECC-------------------------------------THHHHHHH
T ss_pred             HHHHhHhhHHHHHHHHHHHHHHhcCceEEEEeccccccccCcc-------------------chhhHHHHHHHHHHHHHH
Confidence            889999999999999999664  12689999997775543221                   025777777777776666


Q ss_pred             HHh----cCCceEEEecceeeCCCCCCCCch-hHHHHHH----HhhCCCCcccccccCcccHHHHHHHHHhhhcCCC--C
Q 023689          179 AEK----HGVDVVAIHPATCLGPLMQPYLNA-SCAVLQQ----LLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA--A  247 (278)
Q Consensus       179 ~~~----~~~~~~~lrp~~i~g~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~  247 (278)
                      +.+    +|+++++++||.|.++........ ...+...    .....      ....+..++|+|+++++++....  .
T Consensus       221 a~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~------p~~r~~~peevA~~v~~L~s~~~~~i  294 (319)
T 2ptg_A          221 AFEAGRARAVRVNCISAGPLKSRAASAIGKAGDKTFIDLAIDYSEANA------PLQKELESDDVGRAALFLLSPLARAV  294 (319)
T ss_dssp             HHHHHHHHCCEEEEEEECCCC-------------------------------------CCCHHHHHHHHHHHTSGGGTTC
T ss_pred             HHHhccccCeeEEEEeeCCccChhhhhcccccchhhHHHHHHHHhccC------CCCCCCCHHHHHHHHHHHhCcccCCc
Confidence            643    699999999999998753321000 0000000    00111      12346799999999999987532  3


Q ss_pred             CceEEecCccccH
Q 023689          248 SGRYLCTNGIYQF  260 (278)
Q Consensus       248 ~~~~~~~~~~~s~  260 (278)
                      .|.++..++.+++
T Consensus       295 tG~~i~vdGG~~~  307 (319)
T 2ptg_A          295 TGATLYVDNGLHA  307 (319)
T ss_dssp             CSCEEEESTTCTT
T ss_pred             cCCEEEECCCcee
Confidence            5665544444443

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.88  E-value=3.9e-22  Score=174.60  Aligned_cols=205  Identities=18%  Similarity=0.166  Sum_probs=153.9

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccc----ccCCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL----FALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~----~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      ++++|||||+|+||.+++++|.++|+..|++..|+....+..    ..+...+ .++.++.+|++|++++.++++     
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g-~~v~~~~~Dvtd~~~v~~~~~~i~~~  317 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLG-VRVTIAACDAADREALAALLAELPED  317 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTT-CEEEEEECCTTCHHHHHHHHHTCCTT
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcC-CeEEEEEccCCCHHHHHHHHHHHHHh
Confidence            379999999999999999999999986788888864332221    1111112 279999999999999999886     


Q ss_pred             -CccEEEEecccC-CC----CCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCc
Q 023689           80 -GCKGVFHVASPC-TL----EDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (278)
Q Consensus        80 -~~d~vi~~a~~~-~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~  153 (278)
                       .+|+|||+||.. ..    +...+.++..+++|+.|+.++.+++.....++||++||.+++.+.++.            
T Consensus       318 g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~g~~g~------------  385 (496)
T 3mje_A          318 APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVWGSGGQ------------  385 (496)
T ss_dssp             SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHTTCTTC------------
T ss_pred             CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhcCCCCCc------------
Confidence             379999999986 32    122345678899999999999999999888999999999988776553            


Q ss_pred             hhhhhccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHHH
Q 023689          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKD  233 (278)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  233 (278)
                              ..|+.+|...+.+.+.+. ..|+++++|.||.+.+........    ....+..        .....+.+++
T Consensus       386 --------~~YaAaKa~ldala~~~~-~~Gi~v~sV~pG~w~~~gm~~~~~----~~~~l~~--------~g~~~l~pe~  444 (496)
T 3mje_A          386 --------PGYAAANAYLDALAEHRR-SLGLTASSVAWGTWGEVGMATDPE----VHDRLVR--------QGVLAMEPEH  444 (496)
T ss_dssp             --------HHHHHHHHHHHHHHHHHH-HTTCCCEEEEECEESSSCC----------CHHHHH--------TTEEEECHHH
T ss_pred             --------HHHHHHHHHHHHHHHHHH-hcCCeEEEEECCcccCCccccChH----HHHHHHh--------cCCCCCCHHH
Confidence                    579999999998887655 679999999999998765432211    1111111        1233578999


Q ss_pred             HHHHHHhhhcCCCC
Q 023689          234 VAKAQVLLFESPAA  247 (278)
Q Consensus       234 ~a~~~~~~~~~~~~  247 (278)
                      .++++..++..+..
T Consensus       445 ~~~~l~~~l~~~~~  458 (496)
T 3mje_A          445 ALGALDQMLENDDT  458 (496)
T ss_dssp             HHHHHHHHHHHTCS
T ss_pred             HHHHHHHHHcCCCc
Confidence            99999999986544

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.88  E-value=6.4e-22  Score=165.17  Aligned_cols=226  Identities=16%  Similarity=0.091  Sum_probs=145.3

Q ss_pred             cCCceEEEeCc--chhhHHHHHHHHHHCCCCeEEEEecCC-----------CCCcccccCCCCC-CCceEEEEcc-----
Q 023689            7 KEEETVCVTGA--NGFIGTWLVKTLLDNNYTSINATVFPG-----------SDSSHLFALPGAG-DANLRVFEAD-----   67 (278)
Q Consensus         7 ~~~~~vlItGa--tG~iG~~l~~~L~~~g~~~v~~~~r~~-----------~~~~~~~~~~~~~-~~~v~~~~~D-----   67 (278)
                      +++|++|||||  +|+||++++++|.++|+ .|++..|++           ...+....+.... ...+.++.+|     
T Consensus         7 l~gk~~lVTGa~~s~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~   85 (315)
T 2o2s_A            7 LRGQTAFVAGVADSHGYGWAIAKHLASAGA-RVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDK   85 (315)
T ss_dssp             CTTCEEEEECCSSSSSHHHHHHHHHHTTTC-EEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCSS
T ss_pred             CCCCEEEEeCCCCCCChHHHHHHHHHHCCC-EEEEEecccccchhhhhhhhhhhhhhhhhhccccccccccccccccccc
Confidence            67899999999  89999999999999999 788876532           1111112221100 0012344443     


Q ss_pred             -------CCC--------hhhHHHHhc-------CccEEEEecccCC--C----CCCCCchhhhhhhHHhHHHHHHHHHH
Q 023689           68 -------VLD--------SGAVSRAVE-------GCKGVFHVASPCT--L----EDPVDPEKELILPAVQGTLNVLEAAK  119 (278)
Q Consensus        68 -------l~d--------~~~~~~~~~-------~~d~vi~~a~~~~--~----~~~~~~~~~~~~~n~~~~~~ll~~~~  119 (278)
                             ++|        +++++++++       ++|++|||||...  .    +...++++..+++|+.++.++++++.
T Consensus        86 ~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~  165 (315)
T 2o2s_A           86 PEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFG  165 (315)
T ss_dssp             TTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHS
T ss_pred             cchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHH
Confidence                   332        445555543       6899999998642  1    22335678899999999999999996


Q ss_pred             hc--CCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh----cCCceEEEecce
Q 023689          120 RF--GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK----HGVDVVAIHPAT  193 (278)
Q Consensus       120 ~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~----~~~~~~~lrp~~  193 (278)
                      ..  ..++||++||..+..+.+..                   ...|+.+|...+.+.+.++.+    +|+++++++||.
T Consensus       166 ~~m~~~g~Iv~isS~~~~~~~~~~-------------------~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~  226 (315)
T 2o2s_A          166 PIMNEGGSAVTLSYLAAERVVPGY-------------------GGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGP  226 (315)
T ss_dssp             TTEEEEEEEEEEEEGGGTSCCTTC-------------------CTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECC
T ss_pred             HHHhcCCEEEEEecccccccCCCc-------------------cHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEeccc
Confidence            54  12689999997775443321                   036999999999888877754    589999999999


Q ss_pred             eeCCCCCCC-----CchhHHHHHHHhhCCCCcccccccCcccHHHHHHHHHhhhcCCC--CCceEEecCccc
Q 023689          194 CLGPLMQPY-----LNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLCTNGIY  258 (278)
Q Consensus       194 i~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~~~~  258 (278)
                      |.++.....     ...............|      ...+..++|+|+++++++....  ..|.++..++.+
T Consensus       227 v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p------~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  292 (315)
T 2o2s_A          227 LKSRAASAIGKSGEKSFIDYAIDYSYNNAP------LRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGL  292 (315)
T ss_dssp             CCCHHHHHTTCSSSSCHHHHHHHHHHHHSS------SCCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             ccchhhhhccccccchhHHHHHHHHhccCC------CCCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCe
Confidence            988642110     0011111111111122      2346799999999999986432  356654444433

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.87  E-value=4.2e-21  Score=161.12  Aligned_cols=169  Identities=10%  Similarity=0.075  Sum_probs=123.2

Q ss_pred             CceEEEeCcch--hhHHHHHHHHHHCCCCeEEEEecCC---------CCCcc---cccCCCCCCCceEEEEccCCCh--h
Q 023689            9 EETVCVTGANG--FIGTWLVKTLLDNNYTSINATVFPG---------SDSSH---LFALPGAGDANLRVFEADVLDS--G   72 (278)
Q Consensus         9 ~~~vlItGatG--~iG~~l~~~L~~~g~~~v~~~~r~~---------~~~~~---~~~~~~~~~~~v~~~~~Dl~d~--~   72 (278)
                      +|++|||||++  +||++++++|.++|+ .|++..+++         +....   ...........+.++.+|+++.  +
T Consensus         2 ~k~~lITGas~~~GIG~aiA~~la~~G~-~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   80 (329)
T 3lt0_A            2 EDICFIAGIGDTNGYGWGIAKELSKRNV-KIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTC-EEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred             CcEEEEECCCCCCchHHHHHHHHHHCCC-EEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence            58999999975  999999999999999 787655432         11111   1111111112578899999887  6


Q ss_pred             ------------------hHHHHhc-------CccEEEEecccCC--C----CCCCCchhhhhhhHHhHHHHHHHHHHhc
Q 023689           73 ------------------AVSRAVE-------GCKGVFHVASPCT--L----EDPVDPEKELILPAVQGTLNVLEAAKRF  121 (278)
Q Consensus        73 ------------------~~~~~~~-------~~d~vi~~a~~~~--~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~  121 (278)
                                        ++.++++       ++|++|||||...  .    +...+.++..+++|+.++..+.+++...
T Consensus        81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~  160 (329)
T 3lt0_A           81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             hhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                              6666654       5799999999632  1    2234567889999999999999988654


Q ss_pred             --CCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCc-hhhhHHHHHHHHHHHHHHh----cCCceEEEeccee
Q 023689          122 --GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK-WYPVSKTLAEKAAWEFAEK----HGVDVVAIHPATC  194 (278)
Q Consensus       122 --~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~-~y~~sK~~~e~~~~~~~~~----~~~~~~~lrp~~i  194 (278)
                        .-+++|++||..+..+.+..                    . .|+.||.+.+.+.+.++.+    +|++++++.||.|
T Consensus       161 m~~~g~Iv~isS~~~~~~~~~~--------------------~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v  220 (329)
T 3lt0_A          161 MKPQSSIISLTYHASQKVVPGY--------------------GGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPL  220 (329)
T ss_dssp             EEEEEEEEEEECGGGTSCCTTC--------------------TTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCC
T ss_pred             HhhCCeEEEEeCccccCCCCcc--------------------hHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEeccee
Confidence              12689999998876554432                    3 6899998888877776653    5999999999999


Q ss_pred             eCCC
Q 023689          195 LGPL  198 (278)
Q Consensus       195 ~g~~  198 (278)
                      .++.
T Consensus       221 ~T~~  224 (329)
T 3lt0_A          221 KSRA  224 (329)
T ss_dssp             CCHH
T ss_pred             echh
Confidence            8874

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.87  E-value=1.9e-21  Score=172.05  Aligned_cols=224  Identities=18%  Similarity=0.172  Sum_probs=158.3

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEE-ecCCCC-------------Cccc-ccCCCCCCCceEEEEccCCChh
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINAT-VFPGSD-------------SSHL-FALPGAGDANLRVFEADVLDSG   72 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~-~r~~~~-------------~~~~-~~~~~~~~~~v~~~~~Dl~d~~   72 (278)
                      .++++|||||+|+||.++++.|.++|+..|++. .|+...             ...+ ..+...+. ++.++.+|++|.+
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~-~v~~~~~Dvtd~~  328 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGA-TATVVTCDLTDAE  328 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTC-EEEEEECCTTSHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCC-EEEEEECCCCCHH
Confidence            468999999999999999999999999557666 776422             1111 11111122 7899999999999


Q ss_pred             hHHHHhcC------ccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHhcC-----CCEEEEecceeeeec
Q 023689           73 AVSRAVEG------CKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRFG-----VRRVVVTSSISAIVP  137 (278)
Q Consensus        73 ~~~~~~~~------~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~~-----~~~~v~~Ss~~~~~~  137 (278)
                      ++.++++.      +|+|||+||.....    ...+.++..+++|+.|+.++.+++....     .++||++||.+++.+
T Consensus       329 ~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g  408 (525)
T 3qp9_A          329 AAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWG  408 (525)
T ss_dssp             HHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTC
T ss_pred             HHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCC
Confidence            99999864      69999999976542    2234567889999999999999997765     789999999998777


Q ss_pred             CCCCCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCC
Q 023689          138 NPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGS  217 (278)
Q Consensus       138 ~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~  217 (278)
                      .++.                    ..|+.+|...+.+...+. ..|+++++|.||.+-++.....  ....   .+..  
T Consensus       409 ~~g~--------------------~~YaaaKa~l~~lA~~~~-~~gi~v~sI~pG~~~tgm~~~~--~~~~---~~~~--  460 (525)
T 3qp9_A          409 GAGQ--------------------GAYAAGTAFLDALAGQHR-ADGPTVTSVAWSPWEGSRVTEG--ATGE---RLRR--  460 (525)
T ss_dssp             CTTC--------------------HHHHHHHHHHHHHHTSCC-SSCCEEEEEEECCBTTSGGGSS--HHHH---HHHH--
T ss_pred             CCCC--------------------HHHHHHHHHHHHHHHHHH-hCCCCEEEEECCccccccccch--hhHH---HHHh--
Confidence            6543                    579999999998875543 4599999999999944332111  1111   1111  


Q ss_pred             CCcccccccCcccHHHHHHHHHhhhcCCCCCceEEecCccccHHHHHHHHHHh
Q 023689          218 KDTQEYHWLGAVPVKDVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKL  270 (278)
Q Consensus       218 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~  270 (278)
                            .....+.++++++++..++.++..  ..++.  .+.|..+...+...
T Consensus       461 ------~g~~~l~pee~a~~l~~~l~~~~~--~v~v~--~~dw~~~~~~~~~~  503 (525)
T 3qp9_A          461 ------LGLRPLAPATALTALDTALGHGDT--AVTIA--DVDWSSFAPGFTTA  503 (525)
T ss_dssp             ------TTBCCBCHHHHHHHHHHHHHHTCS--EEEEC--CBCHHHHHHHHHSS
T ss_pred             ------cCCCCCCHHHHHHHHHHHHhCCCC--eEEEE--eCCHHHHHhhcccc
Confidence                  123458999999999999986543  12222  34555555555443

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.85  E-value=4.4e-21  Score=173.10  Aligned_cols=196  Identities=17%  Similarity=0.109  Sum_probs=136.8

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEec---------CCCCCcccc-cCCCCCCCceEEEEccCCChhhHH
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVF---------PGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVS   75 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r---------~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~   75 (278)
                      .+++|++|||||+|+||++++++|.++|+ .|++.+|         +.+..+... .+..... .   ..+|++|.+++.
T Consensus        16 ~l~gk~~lVTGas~GIG~aiA~~La~~Ga-~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~-~---~~~D~~d~~~~~   90 (613)
T 3oml_A           16 RYDGRVAVVTGAGAGLGREYALLFAERGA-KVVVNDLGGTHSGDGASQRAADIVVDEIRKAGG-E---AVADYNSVIDGA   90 (613)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEC--------------CHHHHHHHHHHTTC-C---EEECCCCGGGHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcccccccCCHHHHHHHHHHHHHhCC-e---EEEEeCCHHHHH
Confidence            56789999999999999999999999999 8888776         222222111 1111111 2   247999998888


Q ss_pred             HHhc-------CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCC
Q 023689           76 RAVE-------GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPG  140 (278)
Q Consensus        76 ~~~~-------~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~  140 (278)
                      ++++       ++|++|||||....    +...++++..+++|+.|+.++++++    ++++.++||++||.++.++.++
T Consensus        91 ~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~~~  170 (613)
T 3oml_A           91 KVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFG  170 (613)
T ss_dssp             HHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCCTT
T ss_pred             HHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCC
Confidence            8776       57999999997654    2234567889999999999988887    5566789999999888776554


Q ss_pred             CCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCC
Q 023689          141 WKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGS  217 (278)
Q Consensus       141 ~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~  217 (278)
                      .                    ..|+.+|.+.+.+.+.++.+   +|++++++.||.+ ++......              
T Consensus       171 ~--------------------~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~-t~~~~~~~--------------  215 (613)
T 3oml_A          171 Q--------------------VNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA-SRMTEGIL--------------  215 (613)
T ss_dssp             C--------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------CCCC--------------
T ss_pred             C--------------------hHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC-Chhhhhcc--------------
Confidence            3                    57999999999888888765   4899999999864 22211110              


Q ss_pred             CCcccccccCcccHHHHHHHHHhhhcCC
Q 023689          218 KDTQEYHWLGAVPVKDVAKAQVLLFESP  245 (278)
Q Consensus       218 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~  245 (278)
                          +......+.++|+|.++++++...
T Consensus       216 ----~~~~~~~~~pedvA~~v~~L~s~~  239 (613)
T 3oml_A          216 ----PDILFNELKPKLIAPVVAYLCHES  239 (613)
T ss_dssp             ----CHHHHTTCCGGGTHHHHHHTTSTT
T ss_pred             ----chhhhhcCCHHHHHHHHHHhcCCC
Confidence                001233458899999999998764

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.83  E-value=2.1e-21  Score=162.70  Aligned_cols=174  Identities=15%  Similarity=0.122  Sum_probs=124.1

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCC------CeEEEEecCCC--CCcc-cccCCCCCCCceEEEEccCCChhhHHHHhcC
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNY------TSINATVFPGS--DSSH-LFALPGAGDANLRVFEADVLDSGAVSRAVEG   80 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~------~~v~~~~r~~~--~~~~-~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~   80 (278)
                      |||+||||+||||++++..|++.|+      .+|+++++.+.  .... ...+...   .+.++ +|+.+.+.+.+++++
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~---~~~~~-~di~~~~~~~~a~~~   80 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDC---AFPLL-AGLEATDDPKVAFKD   80 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTT---TCTTE-EEEEEESCHHHHTTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcc---ccccc-CCeEeccChHHHhCC
Confidence            6899999999999999999999885      26888776531  0000 0011000   12233 688777778889999


Q ss_pred             ccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcC-CC-EEEEecceeeeecCCCCCCccccCCCCCchhhhh
Q 023689           81 CKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VR-RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCK  158 (278)
Q Consensus        81 ~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~-~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~  158 (278)
                      +|+|||+||.....  ...+...+++|+.++.++++++++++ .+ +++++|+......      ....|..+.     .
T Consensus        81 ~D~Vih~Ag~~~~~--~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~------~~~~~~~~~-----~  147 (327)
T 1y7t_A           81 ADYALLVGAAPRKA--GMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNA------LIAYKNAPG-----L  147 (327)
T ss_dssp             CSEEEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHH------HHHHHTCTT-----S
T ss_pred             CCEEEECCCcCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhH------HHHHHHcCC-----C
Confidence            99999999976532  34567899999999999999999985 55 7777775331100      001111100     1


Q ss_pred             ccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCC
Q 023689          159 SRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQ  200 (278)
Q Consensus       159 ~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~  200 (278)
                      .+...|+.+|..+|++...+++.+|++..++||++|||+...
T Consensus       148 ~p~~~yg~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~~  189 (327)
T 1y7t_A          148 NPRNFTAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSS  189 (327)
T ss_dssp             CGGGEEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSST
T ss_pred             ChhheeccchHHHHHHHHHHHHHhCcChhheeeeEEEcCCCC
Confidence            122579999999999999999889999999999999999753

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.81  E-value=3.5e-19  Score=160.14  Aligned_cols=224  Identities=17%  Similarity=0.111  Sum_probs=148.9

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccC-CChhhH-HHH---hcC
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADV-LDSGAV-SRA---VEG   80 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl-~d~~~~-~~~---~~~   80 (278)
                      .+++|++|||||+++||++++++|.++|+ .|++.+++.. .+....+...+. ++..+.+|+ .+.+.+ +++   +.+
T Consensus       319 ~l~gkvalVTGas~GIG~a~A~~la~~Ga-~Vv~~~~~~~-~~~~~~i~~~g~-~~~~~~~Dv~~~~~~~~~~~~~~~G~  395 (604)
T 2et6_A          319 SLKDKVVLITGAGAGLGKEYAKWFAKYGA-KVVVNDFKDA-TKTVDEIKAAGG-EAWPDQHDVAKDSEAIIKNVIDKYGT  395 (604)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEECSSCC-HHHHHHHHHTTC-EEEEECCCHHHHHHHHHHHHHHHHSC
T ss_pred             ccCCCeEEEECcchHHHHHHHHHHHHCCC-EEEEEeCccH-HHHHHHHHhcCC-eEEEEEcChHHHHHHHHHHHHHhcCC
Confidence            46789999999999999999999999999 7777765321 111111111111 677788999 555432 222   336


Q ss_pred             ccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccCCCCC
Q 023689           81 CKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (278)
Q Consensus        81 ~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~  152 (278)
                      +|++|||||....    +...++|+..+++|+.|+..+.+++    ++++-+++|++||.++..+.++.           
T Consensus       396 iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~~~-----------  464 (604)
T 2et6_A          396 IDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQ-----------  464 (604)
T ss_dssp             CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTB-----------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCC-----------
Confidence            8999999997543    2234578899999999988877766    44556799999998887665442           


Q ss_pred             chhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcc
Q 023689          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (278)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  229 (278)
                               ..|+.||.....+.+.++.+   +||++++|.||. .++.....       ...           ...+..
T Consensus       465 ---------~~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~~~-------~~~-----------~~~~~~  516 (604)
T 2et6_A          465 ---------ANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTLSI-------MRE-----------QDKNLY  516 (604)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC---------------------------CCSS
T ss_pred             ---------hhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCcccccc-------Cch-----------hhccCC
Confidence                     46888888887777777654   599999999983 43321110       000           012345


Q ss_pred             cHHHHHHHHHhhhcCCC-CCce-EEecC------------------ccccHHHHHHHHHHhC
Q 023689          230 PVKDVAKAQVLLFESPA-ASGR-YLCTN------------------GIYQFGDFAERVSKLF  271 (278)
Q Consensus       230 ~~~D~a~~~~~~~~~~~-~~~~-~~~~~------------------~~~s~~e~~~~i~~~~  271 (278)
                      .++|+|.++++++.... ..|. +.+.+                  ..++..++.+.+.+..
T Consensus       517 ~pe~vA~~v~~L~s~~~~itG~~~~vdGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  578 (604)
T 2et6_A          517 HADQVAPLLVYLGTDDVPVTGETFEIGGGWIGNTRWQRAKGAVSHDEHTTVEFIKEHLNEIT  578 (604)
T ss_dssp             CGGGTHHHHHHTTSTTCCCCSCEEEEETTEEEEEEEEECCCEECCSSSCCHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHhCCccCCCCcEEEECCCeeEeeeeeccccccCCCCCCCHHHHHHHHHHHh
Confidence            88999999999886533 2443 32222                  2357777777777654

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.79  E-value=1.6e-18  Score=145.77  Aligned_cols=209  Identities=9%  Similarity=-0.009  Sum_probs=140.3

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHH-CCCCeEEEEecCCCCCcc------------cc-cCCCCCCCceEEEEccCCChh
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLD-NNYTSINATVFPGSDSSH------------LF-ALPGAGDANLRVFEADVLDSG   72 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~-~g~~~v~~~~r~~~~~~~------------~~-~~~~~~~~~v~~~~~Dl~d~~   72 (278)
                      ..+|++|||||+++||+++++.|.+ .|+ .|++..|+.+....            .. .+...+ ..+..+.+|++|++
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA-~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G-~~a~~i~~Dvtd~~  122 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGA-DTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKG-LYAKSINGDAFSDE  122 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCC-EEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTT-CCEEEEESCTTSHH
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCC-EEEEEeCCchhhhhhcccccchhHHHHHHHHHhcC-CceEEEECCCCCHH
Confidence            4579999999999999999999999 999 88888776544221            11 111111 26889999999999


Q ss_pred             hHHHHhc-------CccEEEEecccCC--------------------------------------CCCCCCchhhhhhhH
Q 023689           73 AVSRAVE-------GCKGVFHVASPCT--------------------------------------LEDPVDPEKELILPA  107 (278)
Q Consensus        73 ~~~~~~~-------~~d~vi~~a~~~~--------------------------------------~~~~~~~~~~~~~~n  107 (278)
                      +++++++       ++|++||+||...                                      .+...++|+..+++|
T Consensus       123 ~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn  202 (405)
T 3zu3_A          123 IKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVM  202 (405)
T ss_dssp             HHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhh
Confidence            8888765       5799999998741                                      112334677888888


Q ss_pred             HhHHH-HHHHHHHhc----CCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh-
Q 023689          108 VQGTL-NVLEAAKRF----GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK-  181 (278)
Q Consensus       108 ~~~~~-~ll~~~~~~----~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-  181 (278)
                      ..+.. .+++++...    +-+++|++||..+..+.+..                  ....|+.+|...+.+.+.++.+ 
T Consensus       203 ~~~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~~p~~------------------~~~aY~AaKaal~~ltrsLA~El  264 (405)
T 3zu3_A          203 GGEDWQMWIDALLDAGVLAEGAQTTAFTYLGEKITHDIY------------------WNGSIGAAKKDLDQKVLAIRESL  264 (405)
T ss_dssp             SSHHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGGTTTT------------------TTSHHHHHHHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCcCCCc------------------cchHHHHHHHHHHHHHHHHHHHh
Confidence            87775 555554322    12689999997775543321                  0146888888888777776654 


Q ss_pred             --c-CCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHHHHHHHHHhhhcC
Q 023689          182 --H-GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFES  244 (278)
Q Consensus       182 --~-~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~  244 (278)
                        + |++++++.||.|-++...... ..+........  +      ...+-..+|+++++.+++..
T Consensus       265 a~~~GIRVNaVaPG~i~T~~s~~ip-~~p~y~~~l~~--~------mkr~G~~Ed~a~~i~~L~sd  321 (405)
T 3zu3_A          265 AAHGGGDARVSVLKAVVSQASSAIP-MMPLYLSLLFK--V------MKEKGTHEGCIEQVYSLYKD  321 (405)
T ss_dssp             HTTTSCEEEEEECCCCCCHHHHTST-THHHHHHHHHH--H------HHHHTCCCCHHHHHHHHHHH
T ss_pred             CcccCeEEEEEEeCCCcCchhhcCC-CCcHHHHHHHH--H------HhcCCCcHHHHHHHHHHHhc
Confidence              5 899999999999887543221 11111111111  0      22334558999999888864

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.78  E-value=3.5e-18  Score=145.02  Aligned_cols=208  Identities=13%  Similarity=0.023  Sum_probs=137.7

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHH-CCCCeEEEEecCCCCCccc-------------ccCCCCCCCceEEEEccCCChhh
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLD-NNYTSINATVFPGSDSSHL-------------FALPGAGDANLRVFEADVLDSGA   73 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~-~g~~~v~~~~r~~~~~~~~-------------~~~~~~~~~~v~~~~~Dl~d~~~   73 (278)
                      .+|++|||||+++||+++++.|.+ .|+ .|++..|+.+.....             ..+...+ ..+..+.+|++|+++
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA-~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G-~~a~~i~~Dvtd~~~  137 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGA-DTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAG-LYSKSINGDAFSDAA  137 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCC-EEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTT-CCEEEEESCTTSHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCC-EEEEEeCCchhhhhhhcccccchhHHHHHHHHhcC-CcEEEEEecCCCHHH
Confidence            478999999999999999999999 999 888888765543221             1111112 268899999999988


Q ss_pred             HHHHhc--------CccEEEEecccC-------------CC-------------------------CCCCCchhhhhhhH
Q 023689           74 VSRAVE--------GCKGVFHVASPC-------------TL-------------------------EDPVDPEKELILPA  107 (278)
Q Consensus        74 ~~~~~~--------~~d~vi~~a~~~-------------~~-------------------------~~~~~~~~~~~~~n  107 (278)
                      ++++++        ++|++|||||..             ..                         +...++|+..+++|
T Consensus       138 v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn  217 (422)
T 3s8m_A          138 RAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVM  217 (422)
T ss_dssp             HHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhh
Confidence            777653        579999999862             10                         11233556677777


Q ss_pred             HhHHH-HHHHHHHhcC----CCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh-
Q 023689          108 VQGTL-NVLEAAKRFG----VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK-  181 (278)
Q Consensus       108 ~~~~~-~ll~~~~~~~----~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-  181 (278)
                      ..+.. .+++++....    -+++|++||.++..+.+.                  .....|+.||...+.+.+.++.+ 
T Consensus       218 ~~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p~------------------~~~~aY~ASKaAl~~lTrsLA~El  279 (422)
T 3s8m_A          218 GGQDWELWIDALEGAGVLADGARSVAFSYIGTEITWPI------------------YWHGALGKAKVDLDRTAQRLNARL  279 (422)
T ss_dssp             SSHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHHH------------------HTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccCCC------------------ccchHHHHHHHHHHHHHHHHHHHh
Confidence            66664 5666654322    258999999776433211                  01146888888888777777754 


Q ss_pred             --cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHHHHHHHHHhhhcC
Q 023689          182 --HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFES  244 (278)
Q Consensus       182 --~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~  244 (278)
                        +|++++++.||.|-++..... ...+..+.....  +      ....-..+||++++.+++..
T Consensus       280 a~~GIRVNaVaPG~i~T~~~~~i-p~~~~~~~~~~~--~------m~r~G~pEdva~~v~~L~sd  335 (422)
T 3s8m_A          280 AKHGGGANVAVLKSVVTQASAAI-PVMPLYISMVYK--I------MKEKGLHEGTIEQLDRLFRE  335 (422)
T ss_dssp             HTTTCEEEEEEECCCCCTTGGGS-THHHHHHHHHHH--H------HHHTTCCCCHHHHHHHHHHH
T ss_pred             CccCEEEEEEEcCCCcChhhhcC-CCChHHHHHHHh--h------hcCCcChHHHHHHHHHHhcc
Confidence              599999999999999875433 122221111110  0      12233558999999888764

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.77  E-value=1e-18  Score=157.13  Aligned_cols=200  Identities=19%  Similarity=0.140  Sum_probs=132.5

Q ss_pred             CccccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCC---------CCCccc-ccCCCCCCCceEEEEccCCC
Q 023689            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG---------SDSSHL-FALPGAGDANLRVFEADVLD   70 (278)
Q Consensus         1 m~~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~---------~~~~~~-~~~~~~~~~~v~~~~~Dl~d   70 (278)
                      |.+| .+++|++|||||+++||+++++.|.++|+ .|++.+|+.         +..+.+ ..+...+. .+   ..|+.|
T Consensus         1 m~~~-~l~gkvalVTGas~GIG~a~A~~la~~Ga-~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~-~~---~~d~~d   74 (604)
T 2et6_A            1 MSPV-DFKDKVVIITGAGGGLGKYYSLEFAKLGA-KVVVNDLGGALNGQGGNSKAADVVVDEIVKNGG-VA---VADYNN   74 (604)
T ss_dssp             -CCC-CCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECC-----------CHHHHHHHHHHHTTC-EE---EEECCC
T ss_pred             CCCC-CCCCCEEEEeCCCcHHHHHHHHHHHHcCC-EEEEEeCCccccccccchHHHHHHHHHHHhcCC-eE---EEEcCC
Confidence            4444 46789999999999999999999999999 787776643         211111 11111111 22   246666


Q ss_pred             hhhHHHHh-------cCccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeee
Q 023689           71 SGAVSRAV-------EGCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAI  135 (278)
Q Consensus        71 ~~~~~~~~-------~~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~  135 (278)
                      .+++++++       .++|++|||||....    +...++|+..+++|+.|+..+.+++    ++++.++||++||.++.
T Consensus        75 ~~~~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~  154 (604)
T 2et6_A           75 VLDGDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGL  154 (604)
T ss_dssp             TTCHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHc
Confidence            64444433       368999999997543    2334578899999999988877766    44556799999998887


Q ss_pred             ecCCCCCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHH
Q 023689          136 VPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQ  212 (278)
Q Consensus       136 ~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~  212 (278)
                      .+.++.                    ..|+.+|.....+.+.++.+   +||++++|.|+ +.++.....          
T Consensus       155 ~~~~~~--------------------~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~m~~~~----------  203 (604)
T 2et6_A          155 YGNFGQ--------------------ANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSRMTESI----------  203 (604)
T ss_dssp             HCCTTB--------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCHHHHTT----------
T ss_pred             CCCCCc--------------------hHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCcccccc----------
Confidence            765542                    45777887777777766654   59999999996 322210000          


Q ss_pred             HhhCCCCcccccccCcccHHHHHHHHHhhhcCC
Q 023689          213 LLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP  245 (278)
Q Consensus       213 ~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  245 (278)
                          .    +........++|+|.++++++...
T Consensus       204 ----~----~~~~~~~~~pe~vA~~v~~L~s~~  228 (604)
T 2et6_A          204 ----M----PPPMLEKLGPEKVAPLVLYLSSAE  228 (604)
T ss_dssp             ----S----CHHHHTTCSHHHHHHHHHHHTSSS
T ss_pred             ----C----ChhhhccCCHHHHHHHHHHHhCCc
Confidence                0    000122358999999999998654

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.76  E-value=2.5e-18  Score=159.01  Aligned_cols=206  Identities=18%  Similarity=0.201  Sum_probs=150.9

Q ss_pred             CCceEEEeCcchhhHHHHHHHHH-HCCCCeEEEEecCCCCCccc----ccCCCCCCCceEEEEccCCChhhHHHHhc---
Q 023689            8 EEETVCVTGANGFIGTWLVKTLL-DNNYTSINATVFPGSDSSHL----FALPGAGDANLRVFEADVLDSGAVSRAVE---   79 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~-~~g~~~v~~~~r~~~~~~~~----~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---   79 (278)
                      .++++|||||+|+||+.+++.|. ++|++.|++..|+....+..    ..+...+. ++.++.+|++|.++++++++   
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~-~v~~~~~Dvsd~~~v~~~~~~~~  607 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGA-EVSLQACDVADRETLAKVLASIP  607 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHTSC
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCC-cEEEEEeecCCHHHHHHHHHHHH
Confidence            36899999999999999999999 78986688888874332221    22222222 78999999999999999886   


Q ss_pred             ---CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCC
Q 023689           80 ---GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (278)
Q Consensus        80 ---~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~  152 (278)
                         .+|+|||+||....    +...+.|+..+++|+.|+.++.+++.. .. +||++||.++..+.++.           
T Consensus       608 ~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~-~l-~iV~~SS~ag~~g~~g~-----------  674 (795)
T 3slk_A          608 DEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDP-DV-ALVLFSSVSGVLGSGGQ-----------  674 (795)
T ss_dssp             TTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCT-TS-EEEEEEETHHHHTCSSC-----------
T ss_pred             HhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhh-CC-EEEEEccHHhcCCCCCC-----------
Confidence               36999999997654    223456788999999999999998833 34 89999999988876653           


Q ss_pred             chhhhhccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHH
Q 023689          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVK  232 (278)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  232 (278)
                               ..|+.+|...+.+.++++ ..|+++++|.||.+-++.....  ........+..        .....+..+
T Consensus       675 ---------~~YaAaka~~~alA~~~~-~~Gi~v~sI~pG~v~t~g~~~~--~~~~~~~~~~~--------~g~~~l~~~  734 (795)
T 3slk_A          675 ---------GNYAAANSFLDALAQQRQ-SRGLPTRSLAWGPWAEHGMAST--LREAEQDRLAR--------SGLLPISTE  734 (795)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHH-HTTCCEEEEEECCCSCCCHHHH--HHHHHHHHHHH--------TTBCCCCHH
T ss_pred             ---------HHHHHHHHHHHHHHHHHH-HcCCeEEEEECCeECcchhhcc--ccHHHHHHHHh--------cCCCCCCHH
Confidence                     579999998888877665 5699999999998876542111  01111111111        123457889


Q ss_pred             HHHHHHHhhhcCCCC
Q 023689          233 DVAKAQVLLFESPAA  247 (278)
Q Consensus       233 D~a~~~~~~~~~~~~  247 (278)
                      +....+..++.++..
T Consensus       735 e~~~~~~~~l~~~~~  749 (795)
T 3slk_A          735 EGLSQFDAACGGAHT  749 (795)
T ss_dssp             HHHHHHHHHHTSSCS
T ss_pred             HHHHHHHHHHhCCCc
Confidence            999998888876543

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.76  E-value=4.8e-18  Score=165.10  Aligned_cols=204  Identities=16%  Similarity=0.118  Sum_probs=141.3

Q ss_pred             ccCCceEEEeCcchh-hHHHHHHHHHHCCCCeEEEE-ecCCCCCccc-cc----CCCCCCCceEEEEccCCChhhHHHHh
Q 023689            6 EKEEETVCVTGANGF-IGTWLVKTLLDNNYTSINAT-VFPGSDSSHL-FA----LPGAGDANLRVFEADVLDSGAVSRAV   78 (278)
Q Consensus         6 ~~~~~~vlItGatG~-iG~~l~~~L~~~g~~~v~~~-~r~~~~~~~~-~~----~~~~~~~~v~~~~~Dl~d~~~~~~~~   78 (278)
                      .+++|++|||||+|+ ||+++++.|++.|+ .|++. .|+.+..... ..    +...+ .++.++.+|++|.+++.+++
T Consensus       672 ~l~gKvaLVTGASsGgIG~aIA~~La~~GA-~Vvl~~~R~~~~l~~~~~eL~~~~~~~g-~~v~~v~~DVsd~~sV~alv  749 (1887)
T 2uv8_A          672 TFKDKYVLITGAGKGSIGAEVLQGLLQGGA-KVVVTTSRFSKQVTDYYQSIYAKYGAKG-STLIVVPFNQGSKQDVEALI  749 (1887)
T ss_dssp             CCTTCEEEEESCCSSSHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHHHHHHCCTT-CEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHHCCC-EEEEEecCCHHHHHHHHHHHHHHhhcCC-CeEEEEEecCCCHHHHHHHH
Confidence            467899999999999 99999999999999 77777 4544332111 11    11111 27889999999999888876


Q ss_pred             c-------------CccEEEEecccCCCC-----CC--CCchhhhhhhHHhHHHHHHHHHHhc------CCCEEEEecce
Q 023689           79 E-------------GCKGVFHVASPCTLE-----DP--VDPEKELILPAVQGTLNVLEAAKRF------GVRRVVVTSSI  132 (278)
Q Consensus        79 ~-------------~~d~vi~~a~~~~~~-----~~--~~~~~~~~~~n~~~~~~ll~~~~~~------~~~~~v~~Ss~  132 (278)
                      +             .+|++|||||.....     ..  .+.++..+++|+.++..++++++..      +.++||++||.
T Consensus       750 ~~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~  829 (1887)
T 2uv8_A          750 EFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPN  829 (1887)
T ss_dssp             HHHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSC
T ss_pred             HHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcCh
Confidence            3             489999999975432     11  2456889999999999999987432      22589999997


Q ss_pred             eeeecCCCCCCccccCCCCCchhhhhccCchhhhHHHHHHHH-HHHHHHhcC--CceEEEecceeeC-CCCCCCCchhHH
Q 023689          133 SAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKA-AWEFAEKHG--VDVVAIHPATCLG-PLMQPYLNASCA  208 (278)
Q Consensus       133 ~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~-~~~~~~~~~--~~~~~lrp~~i~g-~~~~~~~~~~~~  208 (278)
                      .+..+  +                    ...|+.+|...+.+ .+.++++.+  +++++++||.+.| +..... .....
T Consensus       830 ag~~g--g--------------------~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~tT~m~~~~-~~~~~  886 (1887)
T 2uv8_A          830 HGTFG--G--------------------DGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSAN-NIIAE  886 (1887)
T ss_dssp             TTCSS--C--------------------BTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEECC-----C-CTTHH
T ss_pred             HhccC--C--------------------CchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEecccccccccccc-hhHHH
Confidence            66543  1                    14699999999987 555554433  9999999999994 432211 11111


Q ss_pred             HHHHHhhCCCCcccccccCcccHHHHHHHHHhhhcCC
Q 023689          209 VLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP  245 (278)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  245 (278)
                          .....+       ..+..++|+|+++++++...
T Consensus       887 ----~~~~~p-------lr~~sPEEVA~avlfLaSd~  912 (1887)
T 2uv8_A          887 ----GIEKMG-------VRTFSQKEMAFNLLGLLTPE  912 (1887)
T ss_dssp             ----HHHTTS-------CCCEEHHHHHHHHHGGGSHH
T ss_pred             ----HHHhcC-------CCCCCHHHHHHHHHHHhCCC
Confidence                112111       13458999999999998654

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.75  E-value=3.3e-18  Score=146.25  Aligned_cols=217  Identities=9%  Similarity=-0.031  Sum_probs=139.2

Q ss_pred             cCCceEEEeCcchhhHHH--HHHHHHHCCCCeEEEEecCCCCCc------------ccccCCCCCCCceEEEEccCCChh
Q 023689            7 KEEETVCVTGANGFIGTW--LVKTLLDNNYTSINATVFPGSDSS------------HLFALPGAGDANLRVFEADVLDSG   72 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~--l~~~L~~~g~~~v~~~~r~~~~~~------------~~~~~~~~~~~~v~~~~~Dl~d~~   72 (278)
                      ..+|++|||||+++||.+  +++.|.+.|+ .|++..|+.....            .+..........+.++.+|++|++
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~  136 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEA-HTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNE  136 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCC-EEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCC-EEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHH
Confidence            457999999999999999  9999999999 8888888654321            111110111126889999999999


Q ss_pred             hHHHHhc-------CccEEEEecccCC-------------C-------------------------CCCCCchhhhhhhH
Q 023689           73 AVSRAVE-------GCKGVFHVASPCT-------------L-------------------------EDPVDPEKELILPA  107 (278)
Q Consensus        73 ~~~~~~~-------~~d~vi~~a~~~~-------------~-------------------------~~~~~~~~~~~~~n  107 (278)
                      +++++++       ++|++||+||...             .                         +...+.++..+++|
T Consensus       137 ~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn  216 (418)
T 4eue_A          137 TKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVM  216 (418)
T ss_dssp             HHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHh
Confidence            8888765       5799999998741             0                         01223455666666


Q ss_pred             HhHHH-HHHHHHHhcC----CCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHH--
Q 023689          108 VQGTL-NVLEAAKRFG----VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAE--  180 (278)
Q Consensus       108 ~~~~~-~ll~~~~~~~----~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~--  180 (278)
                      ..+.. .+++++....    -+++|++||.++..+.+..                  ....|+.+|...+.+.+.++.  
T Consensus       217 ~~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~p~~------------------~~~aY~ASKaAL~~ltrsLA~EL  278 (418)
T 4eue_A          217 GGEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTYKIY------------------REGTIGIAKKDLEDKAKLINEKL  278 (418)
T ss_dssp             SSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGTTTT------------------TTSHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCCCcc------------------ccHHHHHHHHHHHHHHHHHHHHh
Confidence            66554 5555554332    2579999987665443220                  014688888887777766665  


Q ss_pred             -h-cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHHHHHHHHHhhhcCCCCCceE
Q 023689          181 -K-HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGRY  251 (278)
Q Consensus       181 -~-~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~  251 (278)
                       . +|++++++.||.|-++...... ..+.....+..  +      ....-..+|+++++.+++...-.+|.+
T Consensus       279 a~~~GIrVN~V~PG~v~T~~s~~ip-~~p~y~~~~~~--~------mk~~G~~E~v~e~~~~L~sd~~~~g~~  342 (418)
T 4eue_A          279 NRVIGGRAFVSVNKALVTKASAYIP-TFPLYAAILYK--V------MKEKNIHENCIMQIERMFSEKIYSNEK  342 (418)
T ss_dssp             HHHHSCEEEEEECCCCCCHHHHTST-THHHHHHHHHH--H------HHHTTCCCCHHHHHHHHHHHTTSSSSC
T ss_pred             CCccCeEEEEEECCcCcChhhhcCC-CCcHHHHHHHH--H------HhhcCChHHHHHHHHHHhhccccCCCc
Confidence             3 6899999999999987543321 11111111111  0      111234588999999988764444444

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.74  E-value=5.2e-18  Score=160.33  Aligned_cols=205  Identities=16%  Similarity=0.101  Sum_probs=140.4

Q ss_pred             ccCCceEEEeCcchh-hHHHHHHHHHHCCCCeEEEE-ecCCCCCccc-ccCCC---CCCCceEEEEccCCChhhHHHHhc
Q 023689            6 EKEEETVCVTGANGF-IGTWLVKTLLDNNYTSINAT-VFPGSDSSHL-FALPG---AGDANLRVFEADVLDSGAVSRAVE   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~-iG~~l~~~L~~~g~~~v~~~-~r~~~~~~~~-~~~~~---~~~~~v~~~~~Dl~d~~~~~~~~~   79 (278)
                      .+++|++|||||+|+ ||+++++.|+++|+ .|++. .|+.+..... ..+..   ....++.++.+|++|.+++.++++
T Consensus       473 sL~GKvALVTGASgGGIGrAIAr~LA~~GA-~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe  551 (1688)
T 2pff_A          473 TFKDKYVLITGAGKGSIGAEVLQGLLQGGA-KVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIE  551 (1688)
T ss_dssp             CCCSCCEEECSCSSSSTHHHHHHHHHHHTC-EEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHH
T ss_pred             ccCCCEEEEECCChHHHHHHHHHHHHHCcC-EEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHH
Confidence            456789999999998 99999999999999 77776 4554443222 22211   112278899999999998888763


Q ss_pred             -------------CccEEEEecccCCCC-----CC--CCchhhhhhhHHhHHHHHHHHHHh--c----CCCEEEEeccee
Q 023689           80 -------------GCKGVFHVASPCTLE-----DP--VDPEKELILPAVQGTLNVLEAAKR--F----GVRRVVVTSSIS  133 (278)
Q Consensus        80 -------------~~d~vi~~a~~~~~~-----~~--~~~~~~~~~~n~~~~~~ll~~~~~--~----~~~~~v~~Ss~~  133 (278)
                                   .+|+|||+||.....     ..  .+.++..+++|+.++..++++++.  .    +.++||++||.+
T Consensus       552 ~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiA  631 (1688)
T 2pff_A          552 FIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNH  631 (1688)
T ss_dssp             HHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCT
T ss_pred             HHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChH
Confidence                         489999999975432     11  245688999999999999988732  1    235899999976


Q ss_pred             eeecCCCCCCccccCCCCCchhhhhccCchhhhHHHHHHHH-HHHHHHhc--CCceEEEecceeeC-CCCCCCCchhHHH
Q 023689          134 AIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKA-AWEFAEKH--GVDVVAIHPATCLG-PLMQPYLNASCAV  209 (278)
Q Consensus       134 ~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~-~~~~~~~~--~~~~~~lrp~~i~g-~~~~~~~~~~~~~  209 (278)
                      +..+  +                    ...|+.||...+.+ .+.++++.  .++++++.||.+.| +..... ...   
T Consensus       632 G~~G--g--------------------~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~TT~M~~~~-e~~---  685 (1688)
T 2pff_A          632 GTFG--G--------------------DGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSAN-NII---  685 (1688)
T ss_dssp             TTSS--C--------------------BTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCCCSSSCTT-TTC---
T ss_pred             hccC--C--------------------chHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcCCcccCCc-hHH---
Confidence            6433  1                    14699999999988 44333322  28999999999984 432210 000   


Q ss_pred             HHHHhhCCCCcccccccCcccHHHHHHHHHhhhcCC
Q 023689          210 LQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP  245 (278)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  245 (278)
                       .......       ......++|+|+++++++...
T Consensus       686 -~~~l~~i-------plR~~sPEEVA~aIlFLaSd~  713 (1688)
T 2pff_A          686 -AEGIEKM-------GVRTFSQKEMAFNLLGLLTPE  713 (1688)
T ss_dssp             -STTTSSS-------SCCCCCCCTTHHHHHHHTSTT
T ss_pred             -HHHHHhC-------CCCCCCHHHHHHHHHHHhCCC
Confidence             0000111       113458899999999998654

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.73  E-value=7.9e-17  Score=156.42  Aligned_cols=204  Identities=14%  Similarity=0.072  Sum_probs=141.7

Q ss_pred             ccCCceEEEeCcchh-hHHHHHHHHHHCCCCeEEEEe-cCCCCCcc----c-ccCCCCCCCceEEEEccCCChhhHHHHh
Q 023689            6 EKEEETVCVTGANGF-IGTWLVKTLLDNNYTSINATV-FPGSDSSH----L-FALPGAGDANLRVFEADVLDSGAVSRAV   78 (278)
Q Consensus         6 ~~~~~~vlItGatG~-iG~~l~~~L~~~g~~~v~~~~-r~~~~~~~----~-~~~~~~~~~~v~~~~~Dl~d~~~~~~~~   78 (278)
                      .+++|++|||||+|+ ||+++++.|++.|+ .|++.. |+.+....    + ..+...+ .++.++.+|++|.+++.+++
T Consensus       649 ~L~gKvaLVTGASgGgIG~aIAr~LA~~GA-~VVl~~~R~~~~l~~~a~eL~~el~~~G-~~v~~v~~DVsd~esV~alv  726 (1878)
T 2uv9_A          649 TFQGKHALMTGAGAGSIGAEVLQGLLSGGA-KVIVTTSRFSRQVTEYYQGIYARCGARG-SQLVVVPFNQGSKQDVEALV  726 (1878)
T ss_dssp             CCTTCEEEEESCCTTSHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHHHHHHCCTT-CEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHHCCC-EEEEEecCChHHHHHHHHHHHHHhhccC-CeEEEEEcCCCCHHHHHHHH
Confidence            456789999999999 99999999999999 777775 44332211    1 1111112 27889999999999988876


Q ss_pred             c-----------CccEEEEecccCCCC----CC---CCchhhhhhhHHhHHHHHHHHHHh------cCCCEEEEecceee
Q 023689           79 E-----------GCKGVFHVASPCTLE----DP---VDPEKELILPAVQGTLNVLEAAKR------FGVRRVVVTSSISA  134 (278)
Q Consensus        79 ~-----------~~d~vi~~a~~~~~~----~~---~~~~~~~~~~n~~~~~~ll~~~~~------~~~~~~v~~Ss~~~  134 (278)
                      +           .+|+||||||.....    ..   .+.++..+++|+.++.+++++++.      ++.++||++||..+
T Consensus       727 ~~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag  806 (1878)
T 2uv9_A          727 NYIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHG  806 (1878)
T ss_dssp             HHHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSS
T ss_pred             HHHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhh
Confidence            3           489999999975432    11   245688999999999988877422      12368999999776


Q ss_pred             eecCCCCCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh-c--CCceEEEecceee-CCCCCCCCchhHHHH
Q 023689          135 IVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK-H--GVDVVAIHPATCL-GPLMQPYLNASCAVL  210 (278)
Q Consensus       135 ~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-~--~~~~~~lrp~~i~-g~~~~~~~~~~~~~~  210 (278)
                      ..+.  .                    ..|+.+|...+.+...+..+ .  +++++++.||.+. ++....     ....
T Consensus       807 ~~gg--~--------------------~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m~~~-----~~~~  859 (1878)
T 2uv9_A          807 TFGN--D--------------------GLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGLMSA-----NNLV  859 (1878)
T ss_dssp             SSSC--C--------------------SSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTSCSH-----HHHT
T ss_pred             ccCC--c--------------------hHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCccccc-----chhh
Confidence            5441  1                    46999999999887665443 1  3999999999988 554221     1111


Q ss_pred             HHHhhCCCCcccccccCcccHHHHHHHHHhhhcCC
Q 023689          211 QQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP  245 (278)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  245 (278)
                      .......+       .....++|+|+++++++...
T Consensus       860 ~~~~~~~p-------lr~~sPeEVA~avlfLaSd~  887 (1878)
T 2uv9_A          860 AEGVEKLG-------VRTFSQQEMAFNLLGLMAPA  887 (1878)
T ss_dssp             HHHHHTTT-------CCCBCHHHHHHHHHHHHSHH
T ss_pred             HHHHHhcC-------CCCCCHHHHHHHHHHHhCCc
Confidence            12222222       13458999999999887643

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.58  E-value=3.2e-14  Score=144.80  Aligned_cols=228  Identities=15%  Similarity=0.139  Sum_probs=141.8

Q ss_pred             ccCCceEEEeCcchh-hHHHHHHHHHHCCCCeEEEEecCCCC-----Ccccc-cCCCCCCCceEEEEccCCChhhHHHHh
Q 023689            6 EKEEETVCVTGANGF-IGTWLVKTLLDNNYTSINATVFPGSD-----SSHLF-ALPGAGDANLRVFEADVLDSGAVSRAV   78 (278)
Q Consensus         6 ~~~~~~vlItGatG~-iG~~l~~~L~~~g~~~v~~~~r~~~~-----~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~   78 (278)
                      .+++|++|||||+++ ||+++++.|++.|+ .|++..|+.+.     .+.+. .+...+. .+..+.+|++|++++++++
T Consensus      2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA-~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~-~~~~v~~Dvtd~~~v~~lv 2210 (3089)
T 3zen_D         2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGA-TVIATTSRLDDDRLAFYKQLYRDHARFDA-TLWVVPANMASYSDIDKLV 2210 (3089)
T ss_dssp             CCCCCEEEEESCCTTSHHHHHHHHHHHTTC-EEEEEESCCSHHHHHHHHHHHHHHCCTTC-EEEEEECCTTCHHHHHHHH
T ss_pred             cCCCCEEEEeCCChhHHHHHHHHHHHHCCC-EEEEEeCChhhhhhHHHHHHHHHHhhcCC-eEEEEEecCCCHHHHHHHH
Confidence            467899999999999 99999999999999 88888887654     22221 2222222 6888999999999888774


Q ss_pred             c-----------CccEEEEeccc----CCC-----CCCCCchh----hhhhhHHhHHHHHHHHHHh----cCCC---EEE
Q 023689           79 E-----------GCKGVFHVASP----CTL-----EDPVDPEK----ELILPAVQGTLNVLEAAKR----FGVR---RVV  127 (278)
Q Consensus        79 ~-----------~~d~vi~~a~~----~~~-----~~~~~~~~----~~~~~n~~~~~~ll~~~~~----~~~~---~~v  127 (278)
                      +           ++|++|||||.    ...     .....+++    ..+++|+.++..+++++..    .+..   .+|
T Consensus      2211 ~~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii 2290 (3089)
T 3zen_D         2211 EWVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVV 2290 (3089)
T ss_dssp             HHHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEE
T ss_pred             HHHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEE
Confidence            3           47999999997    111     11223343    3488888888877776643    3321   122


Q ss_pred             E-ecceeeeecCCCCCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh--c--CCceEEEecceeeCCCCCCC
Q 023689          128 V-TSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK--H--GVDVVAIHPATCLGPLMQPY  202 (278)
Q Consensus       128 ~-~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~--~--~~~~~~lrp~~i~g~~~~~~  202 (278)
                      . .|+..+.  .++                    ...|+.||...+.+.+.++.+  .  +++++.+.||.|-+......
T Consensus      2291 ~~~ss~~g~--~g~--------------------~~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v~tT~l~~~ 2348 (3089)
T 3zen_D         2291 LPGSPNRGM--FGG--------------------DGAYGEAKSALDALENRWSAEKSWAERVSLAHALIGWTKGTGLMGQ 2348 (3089)
T ss_dssp             EEECSSTTS--CSS--------------------CSSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCEECSTTTTT
T ss_pred             EECCccccc--CCC--------------------chHHHHHHHHHHHHHHHHHhccccCCCeEEEEEeecccCCCccccc
Confidence            2 2211110  001                    146888998888888888877  2  68999999999984332111


Q ss_pred             CchhHHHHHHHhhCCCCcccccccCcccHHHHHHHHHhhhcCCCC---Cc--eEE-ecCc----cccHHHHHHHHH
Q 023689          203 LNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAA---SG--RYL-CTNG----IYQFGDFAERVS  268 (278)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~---~~--~~~-~~~~----~~s~~e~~~~i~  268 (278)
                      ......    .....+       .....++|+|.++++++.....   .+  .++ ++++    ..++.++...++
T Consensus      2349 ~~~~~~----~~~~~~-------~r~~~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~~~~~~~~~~~~~~~ 2413 (3089)
T 3zen_D         2349 NDAIVS----AVEEAG-------VTTYTTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLGDIKIDMAELAAKAR 2413 (3089)
T ss_dssp             TTTTHH----HHGGGS-------CBCEEHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCSSCCCCHHHHTHHHH
T ss_pred             chhHHH----HHHhcC-------CCCCCHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcCcCCCCHHHHHHHHH
Confidence            111111    111111       1223899999999998754321   12  232 2222    357777777553

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.57  E-value=1e-14  Score=148.42  Aligned_cols=166  Identities=17%  Similarity=0.140  Sum_probs=121.9

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcc----cccCCCCCCCceEEEEccCCChhhHHHHhc----
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSH----LFALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~----~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~----   79 (278)
                      .+|++|||||+|+||+++++.|.++|++.|++..|+....+.    ...+...+ .++.++.+|++|.++++++++    
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g-~~v~~~~~Dvsd~~~v~~~~~~~~~ 1961 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQG-VQVLVSTSNASSLDGARSLITEATQ 1961 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTT-CEEEEECCCSSSHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCC-CEEEEEecCCCCHHHHHHHHHHHHh
Confidence            468999999999999999999999999558878887654321    11111112 278899999999998888765    


Q ss_pred             --CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHHHhc--CCCEEEEecceeeeecCCCCCCccccCCCC
Q 023689           80 --GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (278)
Q Consensus        80 --~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~  151 (278)
                        .+|+|||+||....    +...+.++..+++|+.|+.++.+++...  ..++||++||.++..+.++.          
T Consensus      1962 ~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~~g~---------- 2031 (2512)
T 2vz8_A         1962 LGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGNAGQ---------- 2031 (2512)
T ss_dssp             HSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTCTTC----------
T ss_pred             cCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCCCCc----------
Confidence              57999999997543    2345678999999999999998887653  34799999998887665543          


Q ss_pred             CchhhhhccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceee
Q 023689          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCL  195 (278)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~  195 (278)
                                ..|+.+|...+.+.+... ..|++...+..+.+-
T Consensus      2032 ----------~~Y~aaKaal~~l~~~rr-~~Gl~~~a~~~g~~~ 2064 (2512)
T 2vz8_A         2032 ----------ANYGFANSAMERICEKRR-HDGLPGLAVQWGAIG 2064 (2512)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHH-HTTSCCCEEEECCBC
T ss_pred             ----------HHHHHHHHHHHHHHHHHH-HCCCcEEEEEccCcC
Confidence                      579999999999887654 459999999887653

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.43  E-value=3.2e-13  Score=95.59  Aligned_cols=95  Identities=23%  Similarity=0.280  Sum_probs=76.8

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCC-CCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNN-YTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g-~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      .||+|+|+|+ |++|+.+++.|.+.| + +|++.+|+++..+.+...      ++.++.+|+.+.+.+.++++++|+|||
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~-~v~~~~r~~~~~~~~~~~------~~~~~~~d~~~~~~~~~~~~~~d~vi~   75 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNY-SVTVADHDLAALAVLNRM------GVATKQVDAKDEAGLAKALGGFDAVIS   75 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSE-EEEEEESCHHHHHHHHTT------TCEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCc-eEEEEeCCHHHHHHHHhC------CCcEEEecCCCHHHHHHHHcCCCEEEE
Confidence            4679999999 999999999999999 7 899999977554444321      778899999999999999999999999


Q ss_pred             ecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEE
Q 023689           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVV  128 (278)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~  128 (278)
                      +++..                  ....+++++.+.+++.+.+
T Consensus        76 ~~~~~------------------~~~~~~~~~~~~g~~~~~~   99 (118)
T 3ic5_A           76 AAPFF------------------LTPIIAKAAKAAGAHYFDL   99 (118)
T ss_dssp             CSCGG------------------GHHHHHHHHHHTTCEEECC
T ss_pred             CCCch------------------hhHHHHHHHHHhCCCEEEe
Confidence            98431                  1457888998888765543

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=99.35  E-value=8.3e-13  Score=110.27  Aligned_cols=175  Identities=15%  Similarity=0.090  Sum_probs=115.5

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCC------CeEEEEecC----CCCCcc-cccCCCCCCCceEEEEccCCChhhHHH
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNY------TSINATVFP----GSDSSH-LFALPGAGDANLRVFEADVLDSGAVSR   76 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~------~~v~~~~r~----~~~~~~-~~~~~~~~~~~v~~~~~Dl~d~~~~~~   76 (278)
                      +.|||+||||+||||++++..|+..|.      .+|.+++++    .++.+. ...+...   ...+ ..|+...++..+
T Consensus         4 ~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~---~~~~-~~~i~~~~~~~~   79 (329)
T 1b8p_A            4 TPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDC---AFPL-LAGMTAHADPMT   79 (329)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTT---TCTT-EEEEEEESSHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhh---cccc-cCcEEEecCcHH
Confidence            347999999999999999999998875      267777766    211110 0001000   0011 146655567888


Q ss_pred             HhcCccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcC-CC-EEEEecceeeeecCCCCCCccccCCCCCch
Q 023689           77 AVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VR-RVVVTSSISAIVPNPGWKGKVFDETSWTDL  154 (278)
Q Consensus        77 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~-~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~  154 (278)
                      +++++|+|||+|+.....  .......+..|+.++.++++++++++ .. +||++|.-.....      ....+.++   
T Consensus        80 al~~aD~Vi~~ag~~~~~--g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~~t------~~~~~~~~---  148 (329)
T 1b8p_A           80 AFKDADVALLVGARPRGP--GMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTNA------YIAMKSAP---  148 (329)
T ss_dssp             HTTTCSEEEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHH------HHHHHTCT---
T ss_pred             HhCCCCEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHHHH------HHHHHHcC---
Confidence            999999999999975432  23456789999999999999999984 55 7888774221100      00000000   


Q ss_pred             hhhhccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCC
Q 023689          155 EYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLM  199 (278)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~  199 (278)
                      .+  ++...++.++....++...+++..|++...++...|+|+..
T Consensus       149 ~~--p~~~v~g~t~Ld~~r~~~~la~~lgv~~~~v~~~~v~G~Hg  191 (329)
T 1b8p_A          149 SL--PAKNFTAMLRLDHNRALSQIAAKTGKPVSSIEKLFVWGNHS  191 (329)
T ss_dssp             TS--CGGGEEECCHHHHHHHHHHHHHHHTCCGGGEESCEEEBCSS
T ss_pred             CC--CHHHEEEeecHHHHHHHHHHHHHhCcCHHHceEEEEEeccC
Confidence            00  01135788888788888888888899988898878889653

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=99.22  E-value=3.2e-11  Score=100.43  Aligned_cols=117  Identities=15%  Similarity=0.057  Sum_probs=82.7

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCC--CCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNN--YTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g--~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      ++|||+||||+|++|..++..|++.|  . +|++++++++ ......+..... ...+ .+ +.+.+++.++++++|+||
T Consensus         7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~-ev~l~Di~~~-~~~~~dL~~~~~-~~~v-~~-~~~t~d~~~al~gaDvVi   81 (326)
T 1smk_A            7 PGFKVAILGAAGGIGQPLAMLMKMNPLVS-VLHLYDVVNA-PGVTADISHMDT-GAVV-RG-FLGQQQLEAALTGMDLII   81 (326)
T ss_dssp             -CEEEEEETTTSTTHHHHHHHHHHCTTEE-EEEEEESSSH-HHHHHHHHTSCS-SCEE-EE-EESHHHHHHHHTTCSEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCCC-EEEEEeCCCc-HhHHHHhhcccc-cceE-EE-EeCCCCHHHHcCCCCEEE
Confidence            45799999999999999999999988  5 7888876654 111101100000 1111 11 234557888999999999


Q ss_pred             EecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      |+|+......  ......+..|+.++.++++++++.+.+.+|+++|
T Consensus        82 ~~ag~~~~~g--~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~S  125 (326)
T 1smk_A           82 VPAGVPRKPG--MTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLIS  125 (326)
T ss_dssp             ECCCCCCCSS--CCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred             EcCCcCCCCC--CCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC
Confidence            9998654322  2345779999999999999999998777888877

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.15  E-value=3.9e-13  Score=110.36  Aligned_cols=82  Identities=15%  Similarity=0.098  Sum_probs=64.8

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      +++|++|||||+|++|+++++.|.+.|+ .|++..|+.++.+.+.. +... . ++.++.+|++|++++.++++.+|+||
T Consensus       117 l~gk~vlVtGaaGGiG~aia~~L~~~G~-~V~i~~R~~~~~~~l~~~~~~~-~-~~~~~~~D~~~~~~~~~~~~~~DvlV  193 (287)
T 1lu9_A          117 VKGKKAVVLAGTGPVGMRSAALLAGEGA-EVVLCGRKLDKAQAAADSVNKR-F-KVNVTAAETADDASRAEAVKGAHFVF  193 (287)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHH-H-TCCCEEEECCSHHHHHHHTTTCSEEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEECCHHHHHHHHHHHHhc-C-CcEEEEecCCCHHHHHHHHHhCCEEE
Confidence            4678999999999999999999999999 78888887654333221 1000 0 45677899999999999999999999


Q ss_pred             EecccC
Q 023689           86 HVASPC   91 (278)
Q Consensus        86 ~~a~~~   91 (278)
                      |+|+..
T Consensus       194 n~ag~g  199 (287)
T 1lu9_A          194 TAGAIG  199 (287)
T ss_dssp             ECCCTT
T ss_pred             ECCCcc
Confidence            999753

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=99.15  E-value=1.2e-10  Score=85.19  Aligned_cols=104  Identities=13%  Similarity=0.100  Sum_probs=72.4

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHH-hcCcc
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCK   82 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~-~~~~d   82 (278)
                      |+.++|++|+|+|+ |.+|+.+++.|.+.|+ +|++++++++..+.+...      ....+.+|.++.+.+.++ ++++|
T Consensus         1 m~~~~~~~v~I~G~-G~iG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~------~~~~~~~d~~~~~~l~~~~~~~~d   72 (144)
T 2hmt_A            1 MGRIKNKQFAVIGL-GRFGGSIVKELHRMGH-EVLAVDINEEKVNAYASY------ATHAVIANATEENELLSLGIRNFE   72 (144)
T ss_dssp             -----CCSEEEECC-SHHHHHHHHHHHHTTC-CCEEEESCHHHHHTTTTT------CSEEEECCTTCHHHHHTTTGGGCS
T ss_pred             CCCCcCCcEEEECC-CHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHh------CCEEEEeCCCCHHHHHhcCCCCCC
Confidence            44566789999998 9999999999999998 788888865443332221      456788999998888776 78899


Q ss_pred             EEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        83 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      +||++++..            .+.|.    .+.+.+++.+.+++|..++
T Consensus        73 ~vi~~~~~~------------~~~~~----~~~~~~~~~~~~~ii~~~~  105 (144)
T 2hmt_A           73 YVIVAIGAN------------IQAST----LTTLLLKELDIPNIWVKAQ  105 (144)
T ss_dssp             EEEECCCSC------------HHHHH----HHHHHHHHTTCSEEEEECC
T ss_pred             EEEECCCCc------------hHHHH----HHHHHHHHcCCCeEEEEeC
Confidence            999986531            12222    3556677777777776554

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.09  E-value=1.2e-09  Score=91.21  Aligned_cols=174  Identities=14%  Similarity=0.056  Sum_probs=106.3

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHH-HCCCCeEEEEecCCCCCccc-------------ccCCCCCCCceEEEEccCCChh
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLL-DNNYTSINATVFPGSDSSHL-------------FALPGAGDANLRVFEADVLDSG   72 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~-~~g~~~v~~~~r~~~~~~~~-------------~~~~~~~~~~v~~~~~Dl~d~~   72 (278)
                      +.+|++||||||+++|.+.+..|. ..|. .++++.+..+..+..             +.....+ .....+.+|++|++
T Consensus        48 ~~pK~vLVtGaSsGiGlA~AialAf~~GA-~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G-~~a~~i~~Dv~d~e  125 (401)
T 4ggo_A           48 KAPKNVLVLGCSNGYGLASRITAAFGYGA-ATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREG-LYSVTIDGDAFSDE  125 (401)
T ss_dssp             CCCCEEEEESCSSHHHHHHHHHHHHHHCC-EEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHT-CCEEEEESCTTSHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhhCCC-CEEEEecCCcccccccccccchhHHHHHHHHHHcC-CCceeEeCCCCCHH
Confidence            356899999999999999999887 6788 787777755433211             0011111 27889999999999


Q ss_pred             hHHHHhc-------CccEEEEecccCCCCCCC---------Cch-------------h--------hhhhhHHhHHHH--
Q 023689           73 AVSRAVE-------GCKGVFHVASPCTLEDPV---------DPE-------------K--------ELILPAVQGTLN--  113 (278)
Q Consensus        73 ~~~~~~~-------~~d~vi~~a~~~~~~~~~---------~~~-------------~--------~~~~~n~~~~~~--  113 (278)
                      +++++++       ++|++||+++........         ++.             +        ..-+.++.+|..  
T Consensus       126 ~i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vM  205 (401)
T 4ggo_A          126 IKAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVM  205 (401)
T ss_dssp             HHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHH
Confidence            8888875       579999999865321100         000             0        000111122221  


Q ss_pred             -------HHHHHHhcC----CCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc
Q 023689          114 -------VLEAAKRFG----VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH  182 (278)
Q Consensus       114 -------ll~~~~~~~----~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~  182 (278)
                             ...+....+    -.+++-+|+....-.               .|.|   ..+.+|..|...|...+.++.+.
T Consensus       206 g~s~~s~w~~al~~a~lla~G~siva~SYiGse~t---------------~P~Y---~~G~mG~AKaaLEa~~r~La~eL  267 (401)
T 4ggo_A          206 GGEDWERWIKQLSKEGLLEEGCITLAYSYIGPEAT---------------QALY---RKGTIGKAKEHLEATAHRLNKEN  267 (401)
T ss_dssp             SSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGG---------------HHHH---TTSHHHHHHHHHHHHHHHHHHHC
T ss_pred             hhhHHHHHHHHHHhhhcccCCceEEEEeccCccee---------------ecCC---CccHHHHHHHHHHHHHHHHHHhc
Confidence                   122222222    245666665332111               1222   11368999999999999998775


Q ss_pred             -CCceEEEecceeeCCCCC
Q 023689          183 -GVDVVAIHPATCLGPLMQ  200 (278)
Q Consensus       183 -~~~~~~lrp~~i~g~~~~  200 (278)
                       ++++.++.++.+-++...
T Consensus       268 ~~~~a~v~v~~a~vT~Ass  286 (401)
T 4ggo_A          268 PSIRAFVSVNKGLVTRASA  286 (401)
T ss_dssp             TTEEEEEEECCCCCCTTGG
T ss_pred             CCCcEEEEEcCccccchhh
Confidence             677777778777776543

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=99.06  E-value=1.8e-10  Score=95.40  Aligned_cols=168  Identities=11%  Similarity=0.086  Sum_probs=105.7

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCC-CeEEEEec--CCCCCcc----cccC-CCCCCCceEEEEccCCCh-hhHHHHhcC
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVF--PGSDSSH----LFAL-PGAGDANLRVFEADVLDS-GAVSRAVEG   80 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~-~~v~~~~r--~~~~~~~----~~~~-~~~~~~~v~~~~~Dl~d~-~~~~~~~~~   80 (278)
                      |||+||||+|++|++++..|+..|. .++.++++  +.+..+.    +... ...+. .     .++.+. +++.+++++
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~-~-----~~i~~~~d~l~~al~g   74 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRS-D-----ANIYVESDENLRIIDE   74 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCC-C-----CEEEEEETTCGGGGTT
T ss_pred             CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCC-C-----eEEEeCCcchHHHhCC
Confidence            4899999999999999999998875 35666666  3221110    1100 00000 1     223222 236778999


Q ss_pred             ccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhcc
Q 023689           81 CKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSR  160 (278)
Q Consensus        81 ~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  160 (278)
                      +|+|||+|+.....  .......+..|+.++.++++++++++ +.+|+++|.-.-         .+++-..  .....++
T Consensus        75 aD~Vi~~Ag~~~~~--g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SNPv~---------~~t~~~~--k~~~~p~  140 (313)
T 1hye_A           75 SDVVIITSGVPRKE--GMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITNPVD---------VMTYKAL--VDSKFER  140 (313)
T ss_dssp             CSEEEECCSCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSSSHH---------HHHHHHH--HHHCCCT
T ss_pred             CCEEEECCCCCCCC--CCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecCcHH---------HHHHHHH--HhhCcCh
Confidence            99999999975432  23456789999999999999999998 888888872210         0000000  0000122


Q ss_pred             Cchhhh-HHHHHHHHHHHHHHhcCCceEEEecceeeCCC
Q 023689          161 KKWYPV-SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPL  198 (278)
Q Consensus       161 ~~~y~~-sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~  198 (278)
                      ...+|. +.....++....++..|++...++. .++|+.
T Consensus       141 ~rviG~gt~LD~~r~~~~la~~lgv~~~~v~~-~v~G~H  178 (313)
T 1hye_A          141 NQVFGLGTHLDSLRFKVAIAKFFGVHIDEVRT-RIIGEH  178 (313)
T ss_dssp             TSEEECTTHHHHHHHHHHHHHHHTCCGGGEEC-CEEECS
T ss_pred             hcEEEeCccHHHHHHHHHHHHHhCcCHHHeEE-EEeecc
Confidence            245777 6666677777777777887777775 666654

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=99.05  E-value=1.3e-10  Score=95.71  Aligned_cols=168  Identities=14%  Similarity=0.082  Sum_probs=100.9

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCC-CeEEEEec--CCCCCcc----cccCCCCCCCceEEEEccCCChhhHHHHhcCcc
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVF--PGSDSSH----LFALPGAGDANLRVFEADVLDSGAVSRAVEGCK   82 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~-~~v~~~~r--~~~~~~~----~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d   82 (278)
                      |||+||||+|++|+.++..|+..|. .++.++++  +.+..+.    +........ .+++.. +  +    .++++++|
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~-~~~v~~-~--~----~~a~~~aD   72 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDS-NTRVRQ-G--G----YEDTAGSD   72 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTC-CCEEEE-C--C----GGGGTTCS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCC-CcEEEe-C--C----HHHhCCCC
Confidence            5899999999999999999998875 34666666  3321110    000000000 222222 1  1    45688999


Q ss_pred             EEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCc
Q 023689           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK  162 (278)
Q Consensus        83 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  162 (278)
                      +|||+|+.....  .......+..|+.++.++++++++++...+|+++|.-.-. ...   ...+...       .++..
T Consensus        73 vVi~~ag~~~~~--g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SNPv~~-~~~---~~~~~~~-------~p~~r  139 (303)
T 1o6z_A           73 VVVITAGIPRQP--GQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNPVDL-LNR---HLYEAGD-------RSREQ  139 (303)
T ss_dssp             EEEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCSSHHH-HHH---HHHHHSS-------SCGGG
T ss_pred             EEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCChHHH-HHH---HHHHHcC-------CCHHH
Confidence            999999875432  2345678999999999999999999888888888722100 000   0000000       01113


Q ss_pred             hhhh-HHHHHHHHHHHHHHhcCCceEEEecceeeCCCC
Q 023689          163 WYPV-SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLM  199 (278)
Q Consensus       163 ~y~~-sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~  199 (278)
                      ..|. +....-++....++..|++...++ ..++|+..
T Consensus       140 viG~gt~Ld~~r~~~~la~~l~v~~~~v~-~~v~G~HG  176 (303)
T 1o6z_A          140 VIGFGGRLDSARFRYVLSEEFDAPVQNVE-GTILGEHG  176 (303)
T ss_dssp             EEECCHHHHHHHHHHHHHHHHTCCGGGEE-CCEEECSS
T ss_pred             eeecccchhHHHHHHHHHHHhCcCHHHeE-EEEEeCCC
Confidence            4555 444444555555556688777777 77788653

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=99.01  E-value=1.2e-09  Score=79.65  Aligned_cols=78  Identities=21%  Similarity=0.128  Sum_probs=60.3

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHH-hcCcc
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCK   82 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~-~~~~d   82 (278)
                      |...+|++++|+|+ |.+|+.+++.|.+.|+ .|++++++++..+.+...      ++.++.+|.++++.+.++ ++++|
T Consensus         1 m~~~~~~~v~I~G~-G~iG~~la~~L~~~g~-~V~~id~~~~~~~~~~~~------~~~~~~gd~~~~~~l~~~~~~~~d   72 (141)
T 3llv_A            1 MTENGRYEYIVIGS-EAAGVGLVRELTAAGK-KVLAVDKSKEKIELLEDE------GFDAVIADPTDESFYRSLDLEGVS   72 (141)
T ss_dssp             -----CCSEEEECC-SHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHT------TCEEEECCTTCHHHHHHSCCTTCS
T ss_pred             CCCCCCCEEEEECC-CHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHC------CCcEEECCCCCHHHHHhCCcccCC
Confidence            33455789999998 8999999999999999 899999877654444332      678899999999988876 56899


Q ss_pred             EEEEecc
Q 023689           83 GVFHVAS   89 (278)
Q Consensus        83 ~vi~~a~   89 (278)
                      +||.+.+
T Consensus        73 ~vi~~~~   79 (141)
T 3llv_A           73 AVLITGS   79 (141)
T ss_dssp             EEEECCS
T ss_pred             EEEEecC
Confidence            9997643

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.95  E-value=9.4e-10  Score=95.51  Aligned_cols=107  Identities=19%  Similarity=0.162  Sum_probs=76.8

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEec
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a   88 (278)
                      ||+|+||| +|++|+++++.|.+.|+ +|++.+|+.+..+.+....   . ++..+.+|++|.+++.++++++|+|||++
T Consensus         3 ~k~VlViG-aG~iG~~ia~~L~~~G~-~V~v~~R~~~~a~~la~~~---~-~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a   76 (450)
T 1ff9_A            3 TKSVLMLG-SGFVTRPTLDVLTDSGI-KVTVACRTLESAKKLSAGV---Q-HSTPISLDVNDDAALDAEVAKHDLVISLI   76 (450)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHTTTC-EEEEEESSHHHHHHTTTTC---T-TEEEEECCTTCHHHHHHHHTTSSEEEECC
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCcC-EEEEEECCHHHHHHHHHhc---C-CceEEEeecCCHHHHHHHHcCCcEEEECC
Confidence            57999998 79999999999999998 7888888765443332211   1 47788999999999999999999999999


Q ss_pred             ccCCCCCCCCchhhhhh--hH-------HhHHHHHHHHHHhcCCC
Q 023689           89 SPCTLEDPVDPEKELIL--PA-------VQGTLNVLEAAKRFGVR  124 (278)
Q Consensus        89 ~~~~~~~~~~~~~~~~~--~n-------~~~~~~ll~~~~~~~~~  124 (278)
                      +.....   ......++  .|       ...+.+++++|++.|+.
T Consensus        77 ~~~~~~---~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aGv~  118 (450)
T 1ff9_A           77 PYTFHA---TVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGIT  118 (450)
T ss_dssp             C--CHH---HHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTTCE
T ss_pred             ccccch---HHHHHHHhCCCeEEEeecccHHHHHHHHHHHHCCCe
Confidence            753210   00111111  11       23577899999998864

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.80  E-value=6.8e-09  Score=89.04  Aligned_cols=97  Identities=20%  Similarity=0.230  Sum_probs=71.2

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCC--CeEEEEecCCCCCccccc-CCCCCCCceEEEEccCCChhhHHHHhcC--ccE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNY--TSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVEG--CKG   83 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~--~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~~--~d~   83 (278)
                      ||+|+|+|| |+||+.+++.|.+.|.  ..|.+.+|+.++.+.+.. +......++..+.+|++|.+++.+++++  +|+
T Consensus         1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~Dv   79 (405)
T 4ina_A            1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQI   79 (405)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCE
Confidence            579999999 8999999999999984  378888887665444322 1111111588999999999999999987  899


Q ss_pred             EEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCC
Q 023689           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR  124 (278)
Q Consensus        84 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~  124 (278)
                      |||+++...                  ...++++|.+.++.
T Consensus        80 Vin~ag~~~------------------~~~v~~a~l~~g~~  102 (405)
T 4ina_A           80 VLNIALPYQ------------------DLTIMEACLRTGVP  102 (405)
T ss_dssp             EEECSCGGG------------------HHHHHHHHHHHTCC
T ss_pred             EEECCCccc------------------ChHHHHHHHHhCCC
Confidence            999986421                  13566777777754

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.80  E-value=1.3e-08  Score=86.17  Aligned_cols=93  Identities=16%  Similarity=0.147  Sum_probs=71.0

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEec
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a   88 (278)
                      .|||+|.|| |++|+.+++.|.+ .+ +|.+.+++.+..+.+..       .+..+..|+.|.+++.++++++|+||+++
T Consensus        16 ~mkilvlGa-G~vG~~~~~~L~~-~~-~v~~~~~~~~~~~~~~~-------~~~~~~~d~~d~~~l~~~~~~~DvVi~~~   85 (365)
T 3abi_A           16 HMKVLILGA-GNIGRAIAWDLKD-EF-DVYIGDVNNENLEKVKE-------FATPLKVDASNFDKLVEVMKEFELVIGAL   85 (365)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHTT-TS-EEEEEESCHHHHHHHTT-------TSEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred             ccEEEEECC-CHHHHHHHHHHhc-CC-CeEEEEcCHHHHHHHhc-------cCCcEEEecCCHHHHHHHHhCCCEEEEec
Confidence            368999998 9999999998865 46 78888887655444432       56778899999999999999999999987


Q ss_pred             ccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEec
Q 023689           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS  130 (278)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~S  130 (278)
                      +...                  ...++++|.+.|+ +++=+|
T Consensus        86 p~~~------------------~~~v~~~~~~~g~-~yvD~s  108 (365)
T 3abi_A           86 PGFL------------------GFKSIKAAIKSKV-DMVDVS  108 (365)
T ss_dssp             CGGG------------------HHHHHHHHHHHTC-EEEECC
T ss_pred             CCcc------------------cchHHHHHHhcCc-ceEeee
Confidence            5411                  2357888888874 555544

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.78  E-value=2.5e-08  Score=77.94  Aligned_cols=75  Identities=16%  Similarity=0.280  Sum_probs=53.5

Q ss_pred             CCceEEEeCc----------------chhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCCh
Q 023689            8 EEETVCVTGA----------------NGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS   71 (278)
Q Consensus         8 ~~~~vlItGa----------------tG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~   71 (278)
                      ++|+||||||                ||++|.++++.|.+.|+ .|+.+.|+.......       ..++..+  |+...
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga-~V~lv~~~~~~~~~~-------~~~~~~~--~v~s~   71 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGY-EVCLITTKRALKPEP-------HPNLSIR--EITNT   71 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTC-EEEEEECTTSCCCCC-------CTTEEEE--ECCSH
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCC-EEEEEeCCccccccC-------CCCeEEE--EHhHH
Confidence            4799999999                99999999999999999 898888865422110       0145444  44444


Q ss_pred             hh----HHHHhcCccEEEEecccCC
Q 023689           72 GA----VSRAVEGCKGVFHVASPCT   92 (278)
Q Consensus        72 ~~----~~~~~~~~d~vi~~a~~~~   92 (278)
                      ++    +.+.+.++|++||+||+..
T Consensus        72 ~em~~~v~~~~~~~Dili~aAAvsD   96 (232)
T 2gk4_A           72 KDLLIEMQERVQDYQVLIHSMAVSD   96 (232)
T ss_dssp             HHHHHHHHHHGGGCSEEEECSBCCS
T ss_pred             HHHHHHHHHhcCCCCEEEEcCcccc
Confidence            33    3334567999999999754

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.78  E-value=1.3e-07  Score=69.91  Aligned_cols=74  Identities=12%  Similarity=0.131  Sum_probs=59.4

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHH-hcCccEEE
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVF   85 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~-~~~~d~vi   85 (278)
                      .+++|+|+|+ |.+|+.+++.|.+.|+ .|++++|+++..+.+. ..      +...+.+|..+++.+.++ ++++|+||
T Consensus        18 ~~~~v~IiG~-G~iG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~------g~~~~~~d~~~~~~l~~~~~~~ad~Vi   89 (155)
T 2g1u_A           18 KSKYIVIFGC-GRLGSLIANLASSSGH-SVVVVDKNEYAFHRLNSEF------SGFTVVGDAAEFETLKECGMEKADMVF   89 (155)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESCGGGGGGSCTTC------CSEEEESCTTSHHHHHTTTGGGCSEEE
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHhcC------CCcEEEecCCCHHHHHHcCcccCCEEE
Confidence            4579999996 9999999999999999 8999998776554443 21      566788999888877765 77899999


Q ss_pred             Eecc
Q 023689           86 HVAS   89 (278)
Q Consensus        86 ~~a~   89 (278)
                      .+.+
T Consensus        90 ~~~~   93 (155)
T 2g1u_A           90 AFTN   93 (155)
T ss_dssp             ECSS
T ss_pred             EEeC
Confidence            8754

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.77  E-value=4e-08  Score=71.15  Aligned_cols=97  Identities=16%  Similarity=0.179  Sum_probs=69.3

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCCCCCCceEEEEccCCChhhHHHH-hcCccEEEE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFH   86 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~-~~~~d~vi~   86 (278)
                      +|+|+|+|+ |.+|+.+++.|.+.|+ +|++++++++..+.+.. .      ++.++.+|.++++.+.+. ++++|+||+
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~~------~~~~~~~d~~~~~~l~~~~~~~~d~vi~   75 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEI------DALVINGDCTKIKTLEDAGIEDADMYIA   75 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHC------SSEEEESCTTSHHHHHHTTTTTCSEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHhc------CcEEEEcCCCCHHHHHHcCcccCCEEEE
Confidence            478999987 9999999999999998 89988887654433321 1      556788999998877765 678999999


Q ss_pred             ecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEec
Q 023689           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS  130 (278)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~S  130 (278)
                      +...        +     ..|.    .+.+.+++.+.+++|..+
T Consensus        76 ~~~~--------~-----~~~~----~~~~~~~~~~~~~ii~~~  102 (140)
T 1lss_A           76 VTGK--------E-----EVNL----MSSLLAKSYGINKTIARI  102 (140)
T ss_dssp             CCSC--------H-----HHHH----HHHHHHHHTTCCCEEEEC
T ss_pred             eeCC--------c-----hHHH----HHHHHHHHcCCCEEEEEe
Confidence            8532        1     1222    345566667766776544

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=98.69  E-value=7.9e-08  Score=74.92  Aligned_cols=75  Identities=15%  Similarity=0.152  Sum_probs=55.6

Q ss_pred             ccCCceEEEeCc----------------chhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCC
Q 023689            6 EKEEETVCVTGA----------------NGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVL   69 (278)
Q Consensus         6 ~~~~~~vlItGa----------------tG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~   69 (278)
                      .+++|+||||||                ||++|.++++.|.+.|+ .|+++.++... ..    +.    ++.  ..|+.
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga-~V~l~~~~~~l-~~----~~----g~~--~~dv~   72 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGA-NVTLVSGPVSL-PT----PP----FVK--RVDVM   72 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTC-EEEEEECSCCC-CC----CT----TEE--EEECC
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCC-EEEEEECCccc-cc----CC----CCe--EEccC
Confidence            467899999999                69999999999999999 88877665421 11    10    333  46787


Q ss_pred             ChhhHHHH----hcCccEEEEecccCC
Q 023689           70 DSGAVSRA----VEGCKGVFHVASPCT   92 (278)
Q Consensus        70 d~~~~~~~----~~~~d~vi~~a~~~~   92 (278)
                      +.+++.+.    +.++|++||+||+..
T Consensus        73 ~~~~~~~~v~~~~~~~Dili~~Aav~d   99 (226)
T 1u7z_A           73 TALEMEAAVNASVQQQNIFIGCAAVAD   99 (226)
T ss_dssp             SHHHHHHHHHHHGGGCSEEEECCBCCS
T ss_pred             cHHHHHHHHHHhcCCCCEEEECCcccC
Confidence            76655444    357899999999754

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.62  E-value=2.3e-08  Score=86.99  Aligned_cols=111  Identities=13%  Similarity=0.217  Sum_probs=75.6

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHC-CCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~-g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~v   84 (278)
                      .++||+|+|+|+ |++|+.+++.|.+. |+ +|++..|+.++.+.+...    . ++..+.+|+.|.+++.++++++|+|
T Consensus        20 ~l~~k~VlIiGA-GgiG~aia~~L~~~~g~-~V~v~~R~~~ka~~la~~----~-~~~~~~~D~~d~~~l~~~l~~~DvV   92 (467)
T 2axq_A           20 RHMGKNVLLLGS-GFVAQPVIDTLAANDDI-NVTVACRTLANAQALAKP----S-GSKAISLDVTDDSALDKVLADNDVV   92 (467)
T ss_dssp             ---CEEEEEECC-STTHHHHHHHHHTSTTE-EEEEEESSHHHHHHHHGG----G-TCEEEECCTTCHHHHHHHHHTSSEE
T ss_pred             CCCCCEEEEECC-hHHHHHHHHHHHhCCCC-eEEEEECCHHHHHHHHHh----c-CCcEEEEecCCHHHHHHHHcCCCEE
Confidence            356789999998 99999999999998 66 898888876554443321    0 5677889999999999999999999


Q ss_pred             EEecccCCCCC----CCCchhhhhhhHH--hHHHHHHHHHHhcCC
Q 023689           85 FHVASPCTLED----PVDPEKELILPAV--QGTLNVLEAAKRFGV  123 (278)
Q Consensus        85 i~~a~~~~~~~----~~~~~~~~~~~n~--~~~~~ll~~~~~~~~  123 (278)
                      ||+++......    +...-...++.+.  ..+..++++|++.|+
T Consensus        93 In~tp~~~~~~v~~a~l~~g~~vvd~~~~~p~~~~Ll~~Ak~aGv  137 (467)
T 2axq_A           93 ISLIPYTFHPNVVKSAIRTKTDVVTSSYISPALRELEPEIVKAGI  137 (467)
T ss_dssp             EECSCGGGHHHHHHHHHHHTCEEEECSCCCHHHHHHHHHHHHHTC
T ss_pred             EECCchhhhHHHHHHHHhcCCEEEEeecCCHHHHHHHHHHHHcCC
Confidence            99987632100    0000011122222  235678888888775

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=98.60  E-value=1.8e-07  Score=77.32  Aligned_cols=170  Identities=17%  Similarity=0.133  Sum_probs=100.8

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCC-CeEEEEecCCCCCcccccCCCCCCCceEEEEccCCC---hhhHHHHhcCccEEE
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD---SGAVSRAVEGCKGVF   85 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d---~~~~~~~~~~~d~vi   85 (278)
                      |||.|+||+|++|..++..|+..|. ++|.++++++. ......+..... .     .++..   .+++.++++++|+||
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~-~~~a~dL~~~~~-~-----~~l~~~~~t~d~~~a~~~aDvVv   73 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHT-PGVAADLSHIET-R-----ATVKGYLGPEQLPDCLKGCDVVV   73 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSH-HHHHHHHTTSSS-S-----CEEEEEESGGGHHHHHTTCSEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCcc-HHHHHHHhccCc-C-----ceEEEecCCCCHHHHhCCCCEEE
Confidence            4899999999999999999998872 38888888761 111111111100 1     12222   245778899999999


Q ss_pred             EecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCC-EEEEecceeeeecCCCCCCccc-cCCCCCchhhhhccCch
Q 023689           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTSSISAIVPNPGWKGKVF-DETSWTDLEYCKSRKKW  163 (278)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~-~~v~~Ss~~~~~~~~~~~~~~~-~E~~~~~~~~~~~~~~~  163 (278)
                      ++|+......  ......+..|+..+..+.+.++++... .+|++|--......--  ...+ ....       .++...
T Consensus        74 i~ag~~~~~g--~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sNPv~~~~~i~--~~~~~~~~~-------~p~~rv  142 (314)
T 1mld_A           74 IPAGVPRKPG--MTRDDLFNTNATIVATLTAACAQHCPDAMICIISNPVNSTIPIT--AEVFKKHGV-------YNPNKI  142 (314)
T ss_dssp             ECCSCCCCTT--CCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSCHHHHHHHH--HHHHHHTTC-------CCTTSE
T ss_pred             ECCCcCCCCC--CcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCCcchhHHHH--HHHHHHcCC-------CCcceE
Confidence            9998755322  334677899999999999999887644 5666542111000000  0000 0000       011234


Q ss_pred             hhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCC
Q 023689          164 YPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPL  198 (278)
Q Consensus       164 y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~  198 (278)
                      .|.+....-++....++..|++...++ +.++|+.
T Consensus       143 ig~t~Ld~~r~~~~la~~l~v~~~~v~-~~v~G~H  176 (314)
T 1mld_A          143 FGVTTLDIVRANAFVAELKGLDPARVS-VPVIGGH  176 (314)
T ss_dssp             EECCHHHHHHHHHHHHHHTTCCGGGCB-CCEEECS
T ss_pred             EEeecccHHHHHHHHHHHhCcChHhEE-EEEccCC
Confidence            455433344555555556688777666 6778876

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=98.60  E-value=3e-08  Score=82.39  Aligned_cols=174  Identities=16%  Similarity=0.075  Sum_probs=100.2

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCC-Ce-----EEEEecCCC--CC-cccccCCCCCCCceEEEEccCCChhhHHHHhc
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNY-TS-----INATVFPGS--DS-SHLFALPGAGDANLRVFEADVLDSGAVSRAVE   79 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~-~~-----v~~~~r~~~--~~-~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~   79 (278)
                      .+||+||||+|+||++++..|...|. .+     +.+++.++.  .. .....+......-+    .++...+...+.++
T Consensus         3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~----~~~~~~~~~~~~~~   78 (333)
T 5mdh_A            3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLL----KDVIATDKEEIAFK   78 (333)
T ss_dssp             CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTE----EEEEEESCHHHHTT
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhccc----CCEEEcCCcHHHhC
Confidence            36899999999999999999988764 23     777766431  10 00000100000011    12222334577889


Q ss_pred             CccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCC--EEEEecceeeeecCCCCCCccccCCCCCchhhh
Q 023689           80 GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR--RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYC  157 (278)
Q Consensus        80 ~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~--~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~  157 (278)
                      ++|+||+.||.....  .......++.|+..++.+++++++++.+  +++.+|--.....      ....+.+...|.  
T Consensus        79 daDvVvitAg~prkp--G~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsNPvd~~t------~~~~~~~~~~p~--  148 (333)
T 5mdh_A           79 DLDVAILVGSMPRRD--GMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNPANTNC------LTASKSAPSIPK--  148 (333)
T ss_dssp             TCSEEEECCSCCCCT--TCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHH------HHHHHTCTTSCG--
T ss_pred             CCCEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCchHHHH------HHHHHHcCCCCc--
Confidence            999999999865432  2356788999999999999999998765  4666552111000      000000000010  


Q ss_pred             hccCchh-hhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCC
Q 023689          158 KSRKKWY-PVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQ  200 (278)
Q Consensus       158 ~~~~~~y-~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~  200 (278)
                          ... +.+....-++-...+++.+++...++-..|.|++.+
T Consensus       149 ----~~ig~~t~LDs~R~~~~la~~l~v~~~~v~~~vV~GeHgd  188 (333)
T 5mdh_A          149 ----ENFSCLTRLDHNRAKAQIALKLGVTSDDVKNVIIWGNHSS  188 (333)
T ss_dssp             ----GGEEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSST
T ss_pred             ----CEEEEEEhHHHHHHHHHHHHHhCcCHHHeeecEEEEcCCC
Confidence                112 233344444444555567888888875556787543

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.44  E-value=4.9e-07  Score=66.62  Aligned_cols=74  Identities=18%  Similarity=0.281  Sum_probs=57.3

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCC-CCCcccccCCCCCCCceEEEEccCCChhhHHHH-hcCccEEEEe
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG-SDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFHV   87 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~-~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~-~~~~d~vi~~   87 (278)
                      ++++|+|+ |.+|+.+++.|.+.|+ .|+++++++ +..+.+....  . .++.++.+|.+|++.+.++ ++++|.||-+
T Consensus         4 ~~vlI~G~-G~vG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~~--~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~   78 (153)
T 1id1_A            4 DHFIVCGH-SILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRL--G-DNADVIPGDSNDSSVLKKAGIDRCRAILAL   78 (153)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHH--C-TTCEEEESCTTSHHHHHHHTTTTCSEEEEC
T ss_pred             CcEEEECC-CHHHHHHHHHHHHCCC-CEEEEECCChHHHHHHHHhh--c-CCCeEEEcCCCCHHHHHHcChhhCCEEEEe
Confidence            58999996 9999999999999999 888888864 2221221110  0 1688999999999999887 8899999976


Q ss_pred             c
Q 023689           88 A   88 (278)
Q Consensus        88 a   88 (278)
                      .
T Consensus        79 ~   79 (153)
T 1id1_A           79 S   79 (153)
T ss_dssp             S
T ss_pred             c
Confidence            4

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=98.39  E-value=5.1e-07  Score=65.52  Aligned_cols=71  Identities=15%  Similarity=0.184  Sum_probs=59.6

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHH-hcCccEEEEec
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFHVA   88 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~-~~~~d~vi~~a   88 (278)
                      ++|+|.|+ |.+|+.+++.|.+.|+ .|++++++++..+.+...      ++..+.+|.++++.+.++ ++++|+||-+.
T Consensus         8 ~~viIiG~-G~~G~~la~~L~~~g~-~v~vid~~~~~~~~~~~~------g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~   79 (140)
T 3fwz_A            8 NHALLVGY-GRVGSLLGEKLLASDI-PLVVIETSRTRVDELRER------GVRAVLGNAANEEIMQLAHLECAKWLILTI   79 (140)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHT------TCEEEESCTTSHHHHHHTTGGGCSEEEECC
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHc------CCCEEECCCCCHHHHHhcCcccCCEEEEEC
Confidence            58999997 9999999999999999 899999987765554432      778899999999988875 67889998663

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=98.38  E-value=6.8e-07  Score=67.92  Aligned_cols=73  Identities=18%  Similarity=0.081  Sum_probs=59.3

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHC-CCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHH--hcCccEE
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA--VEGCKGV   84 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~-g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~--~~~~d~v   84 (278)
                      .+++|+|+|+ |.+|+.+++.|.+. |+ .|++++++++..+.+...      ++..+.+|.++++.+.++  ++++|+|
T Consensus        38 ~~~~v~IiG~-G~~G~~~a~~L~~~~g~-~V~vid~~~~~~~~~~~~------g~~~~~gd~~~~~~l~~~~~~~~ad~v  109 (183)
T 3c85_A           38 GHAQVLILGM-GRIGTGAYDELRARYGK-ISLGIEIREEAAQQHRSE------GRNVISGDATDPDFWERILDTGHVKLV  109 (183)
T ss_dssp             TTCSEEEECC-SHHHHHHHHHHHHHHCS-CEEEEESCHHHHHHHHHT------TCCEEECCTTCHHHHHTBCSCCCCCEE
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhccCC-eEEEEECCHHHHHHHHHC------CCCEEEcCCCCHHHHHhccCCCCCCEE
Confidence            3568999985 99999999999999 99 899999877655444332      566788999999888877  7889999


Q ss_pred             EEec
Q 023689           85 FHVA   88 (278)
Q Consensus        85 i~~a   88 (278)
                      |.+.
T Consensus       110 i~~~  113 (183)
T 3c85_A          110 LLAM  113 (183)
T ss_dssp             EECC
T ss_pred             EEeC
Confidence            9764

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.34  E-value=2.9e-07  Score=70.92  Aligned_cols=97  Identities=14%  Similarity=0.065  Sum_probs=64.0

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHH---hc--Ccc
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA---VE--GCK   82 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~---~~--~~d   82 (278)
                      .+++||||||+|.||..+++.+...|+ .|++.+++++..+....+      +... ..|..+.+..+++   ..  ++|
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~~~------g~~~-~~d~~~~~~~~~~~~~~~~~~~D  109 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLSRL------GVEY-VGDSRSVDFADEILELTDGYGVD  109 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHTT------CCSE-EEETTCSTHHHHHHHHTTTCCEE
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHc------CCCE-EeeCCcHHHHHHHHHHhCCCCCe
Confidence            468999999999999999999999999 898888876544333332      1111 2466665433333   32  589


Q ss_pred             EEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecce
Q 023689           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSI  132 (278)
Q Consensus        83 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~  132 (278)
                      +||++++.       .           .....++.++..  +++|.+++.
T Consensus       110 ~vi~~~g~-------~-----------~~~~~~~~l~~~--G~~v~~g~~  139 (198)
T 1pqw_A          110 VVLNSLAG-------E-----------AIQRGVQILAPG--GRFIELGKK  139 (198)
T ss_dssp             EEEECCCT-------H-----------HHHHHHHTEEEE--EEEEECSCG
T ss_pred             EEEECCch-------H-----------HHHHHHHHhccC--CEEEEEcCC
Confidence            99999752       0           023344545444  478888763

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=98.32  E-value=5.2e-07  Score=70.65  Aligned_cols=72  Identities=13%  Similarity=0.123  Sum_probs=58.9

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHH-hcCccEEEEec
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFHVA   88 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~-~~~~d~vi~~a   88 (278)
                      |+|+|+|+ |.+|+++++.|.+.|+ .|++++++++..+.+....     ++.++.+|.++++.+.++ ++++|+||-+.
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~~g~-~v~vid~~~~~~~~l~~~~-----~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~   73 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLSRKY-GVVIINKDRELCEEFAKKL-----KATIIHGDGSHKEILRDAEVSKNDVVVILT   73 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHHS-----SSEEEESCTTSHHHHHHHTCCTTCEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHc-----CCeEEEcCCCCHHHHHhcCcccCCEEEEec
Confidence            57999997 9999999999999999 8999998776554432210     678899999999999887 78999998653

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=98.27  E-value=7.2e-07  Score=74.28  Aligned_cols=170  Identities=11%  Similarity=0.050  Sum_probs=98.1

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCC-CeEEEEecCCCCCcc----cccCCCCCCCceEEEEccCCChhhHHHHhcCcc
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSH----LFALPGAGDANLRVFEADVLDSGAVSRAVEGCK   82 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~----~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d   82 (278)
                      +++||.|+|++|++|+.++..++..|. ++|++++.+.++.+-    +..... .  .     .++.-..+..++++++|
T Consensus         7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~-~--~-----~~i~~t~d~~~al~dAD   78 (343)
T 3fi9_A            7 TEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGF-E--G-----LNLTFTSDIKEALTDAK   78 (343)
T ss_dssp             CSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCC-T--T-----CCCEEESCHHHHHTTEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcC-C--C-----CceEEcCCHHHHhCCCC
Confidence            357999999999999999999999884 478888775432211    111000 0  0     11221234667899999


Q ss_pred             EEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCE--EEEecceeeeecCCCCCCccccCCCCCchhhhhcc
Q 023689           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRR--VVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSR  160 (278)
Q Consensus        83 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~--~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  160 (278)
                      +||.+||.....  .......+..|+.....+.+.+.+++...  ++.+|--.....  .   ...+...+       ++
T Consensus        79 vVvitaG~p~kp--G~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvsNPvd~~t--~---i~~k~sg~-------p~  144 (343)
T 3fi9_A           79 YIVSSGGAPRKE--GMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFNPADITG--L---VTLIYSGL-------KP  144 (343)
T ss_dssp             EEEECCC---------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECSSSHHHHH--H---HHHHHHTC-------CG
T ss_pred             EEEEccCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEecCchHHHH--H---HHHHHcCC-------Cc
Confidence            999999864432  23467789999999999999999887554  344442110000  0   00000000       00


Q ss_pred             CchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCC
Q 023689          161 KKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLM  199 (278)
Q Consensus       161 ~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~  199 (278)
                      ....+.+....-++....+++.|++...++-..|.|+..
T Consensus       145 ~rv~g~t~LDs~R~~~~la~~l~v~~~~v~~~~ViGeHg  183 (343)
T 3fi9_A          145 SQVTTLAGLDSTRLQSELAKHFGIKQSLVTNTRTYGGHG  183 (343)
T ss_dssp             GGEEEECCHHHHHHHHHHHHHHTSCGGGEECCCEEESSG
T ss_pred             ceEEEecCcHHHHHHHHHHHHhCcCHHHcccceEEEcCC
Confidence            112233434444444555556788877777566777654

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=98.25  E-value=2.4e-06  Score=70.64  Aligned_cols=177  Identities=13%  Similarity=0.164  Sum_probs=90.0

Q ss_pred             CccccccCCceEEEeCcchhhHHHHHHHHHHCCC-CeEEEEecCCCCCc----ccccCCCCCCCceEEEEccCCChhhHH
Q 023689            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSS----HLFALPGAGDANLRVFEADVLDSGAVS   75 (278)
Q Consensus         1 m~~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~----~~~~~~~~~~~~v~~~~~Dl~d~~~~~   75 (278)
                      |.+..+.+++||.|+|+ |.+|..++..|...|. .++.+++++++..+    .+........ .+++...|       .
T Consensus         1 ~~~~~~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~-~~~i~~~~-------~   71 (326)
T 3vku_A            1 MASITDKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTS-PKKIYSAE-------Y   71 (326)
T ss_dssp             ------CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSC-CCEEEECC-------G
T ss_pred             CcccccCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcC-CcEEEECc-------H
Confidence            55666778899999997 9999999999998876 47888877543222    1111000001 33333222       2


Q ss_pred             HHhcCccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchh
Q 023689           76 RAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLE  155 (278)
Q Consensus        76 ~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~  155 (278)
                      ++++++|+||..||.....  .......++.|+.....+.+.+.++....++.+-|      +|-   ..+++-.+.  .
T Consensus        72 ~a~~~aDiVvi~ag~~~kp--G~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvt------NPv---di~t~~~~k--~  138 (326)
T 3vku_A           72 SDAKDADLVVITAGAPQKP--GETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA------NPV---DILTYATWK--L  138 (326)
T ss_dssp             GGGTTCSEEEECCCCC------------------CHHHHHHHHHTTTCCSEEEECS------SSH---HHHHHHHHH--H
T ss_pred             HHhcCCCEEEECCCCCCCC--CchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEcc------Cch---HHHHHHHHH--h
Confidence            4688999999999864432  23456788999999999999998886544444443      111   000000000  0


Q ss_pred             hhhccCchhhh-HHHHHHHHHHHHHHhcCCceEEEecceeeCCCCC
Q 023689          156 YCKSRKKWYPV-SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQ  200 (278)
Q Consensus       156 ~~~~~~~~y~~-sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~  200 (278)
                      ...++....|. +....-++....++..|++...++. .|.|++..
T Consensus       139 ~g~p~~rviG~gt~LD~~R~~~~la~~lgv~~~~V~~-~ViGeHGd  183 (326)
T 3vku_A          139 SGFPKNRVVGSGTSLDTARFRQSIAKMVNVDARSVHA-YIMGEHGD  183 (326)
T ss_dssp             HCCCGGGEEECTTHHHHHHHHHHHHHHHTSCGGGEEC-CEEBSSST
T ss_pred             cCCCHHHeeeecccCcHHHHHHHHHHHhCCCHHHCeE-EEEcCCCC
Confidence            00011123343 3333344444455566888777775 68888643

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=98.25  E-value=6.5e-07  Score=72.35  Aligned_cols=33  Identities=24%  Similarity=0.374  Sum_probs=26.3

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHC-CCCeEEEEec
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDN-NYTSINATVF   42 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~-g~~~v~~~~r   42 (278)
                      +|||.|+|++|.+|+.+++.+.+. |+ ++++...
T Consensus         5 ~mkV~V~Ga~G~mG~~~~~~~~~~~~~-elva~~d   38 (273)
T 1dih_A            5 NIRVAIAGAGGRMGRQLIQAALALEGV-QLGAALE   38 (273)
T ss_dssp             BEEEEETTTTSHHHHHHHHHHHHSTTE-ECCCEEC
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCC-EEEEEEe
Confidence            369999999999999999998754 66 6664443

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=98.19  E-value=5.6e-06  Score=69.23  Aligned_cols=99  Identities=18%  Similarity=0.146  Sum_probs=59.6

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCC-----CCeEEEEecCCCCCcccccCCCC-CC-CceEEEEccCCChhhHHHHhcC
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNN-----YTSINATVFPGSDSSHLFALPGA-GD-ANLRVFEADVLDSGAVSRAVEG   80 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g-----~~~v~~~~r~~~~~~~~~~~~~~-~~-~~v~~~~~Dl~d~~~~~~~~~~   80 (278)
                      +|+||.|.||||++|+.|++.|++++     ..+++.+.++.+..+.+...-.. .. ..+.+.  |+ +    .+.+++
T Consensus         8 ~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~--~~-~----~~~~~~   80 (352)
T 2nqt_A            8 NATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVE--PT-E----AAVLGG   80 (352)
T ss_dssp             SCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBCE--EC-C----HHHHTT
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccccceeeec--cC-C----HHHhcC
Confidence            45799999999999999999999888     54676665433222222211000 00 011111  22 2    223568


Q ss_pred             ccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEeccee
Q 023689           81 CKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSIS  133 (278)
Q Consensus        81 ~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~  133 (278)
                      +|+||.+.+...                  +..+++.+ +.| .++|-+|+..
T Consensus        81 ~DvVf~alg~~~------------------s~~~~~~~-~~G-~~vIDlSa~~  113 (352)
T 2nqt_A           81 HDAVFLALPHGH------------------SAVLAQQL-SPE-TLIIDCGADF  113 (352)
T ss_dssp             CSEEEECCTTSC------------------CHHHHHHS-CTT-SEEEECSSTT
T ss_pred             CCEEEECCCCcc------------------hHHHHHHH-hCC-CEEEEECCCc
Confidence            999998875422                  23466666 667 4788888754

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.14  E-value=2.8e-06  Score=71.30  Aligned_cols=75  Identities=19%  Similarity=0.193  Sum_probs=54.4

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc-----Ccc
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----GCK   82 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----~~d   82 (278)
                      .+++|||+||+|.||..+++.+...|+ .|+++.++++..+....+      +.. ...|+.+.+++.+.++     ++|
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~V~~~~~~~~~~~~~~~~------g~~-~~~d~~~~~~~~~~~~~~~~~~~D  240 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGY-RVLGIDGGEGKEELFRSI------GGE-VFIDFTKEKDIVGAVLKATDGGAH  240 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSTTHHHHHHHT------TCC-EEEETTTCSCHHHHHHHHHTSCEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-cEEEEcCCHHHHHHHHHc------CCc-eEEecCccHhHHHHHHHHhCCCCC
Confidence            468999999999999999999999999 899999877665544443      221 1237764444444332     689


Q ss_pred             EEEEeccc
Q 023689           83 GVFHVASP   90 (278)
Q Consensus        83 ~vi~~a~~   90 (278)
                      +||++++.
T Consensus       241 ~vi~~~g~  248 (347)
T 2hcy_A          241 GVINVSVS  248 (347)
T ss_dssp             EEEECSSC
T ss_pred             EEEECCCc
Confidence            99999863

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=98.12  E-value=9.3e-06  Score=67.19  Aligned_cols=172  Identities=12%  Similarity=0.136  Sum_probs=100.1

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCC-CeEEEEecCCCCCcc----cccCCCCCCCceEEEEccCCChhhHHHHhcCc
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSH----LFALPGAGDANLRVFEADVLDSGAVSRAVEGC   81 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~----~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~   81 (278)
                      .+++||.|+|+ |.+|..++..|...|. .++.++++++++.+.    +.........+++....|       .++++++
T Consensus         3 ~~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~-------~~a~~~a   74 (326)
T 3pqe_A            3 KHVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT-------YEDCKDA   74 (326)
T ss_dssp             CSCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC-------GGGGTTC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc-------HHHhCCC
Confidence            34579999997 9999999999998886 478888875543221    111100000033333222       2468899


Q ss_pred             cEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccC
Q 023689           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRK  161 (278)
Q Consensus        82 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  161 (278)
                      |+||.+||.....  .......+..|+.....+.+.+.++....++.+-|      +|-   ..+.+-...  ....++.
T Consensus        75 DvVvi~ag~p~kp--G~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvt------NPv---d~~t~~~~k--~~g~p~~  141 (326)
T 3pqe_A           75 DIVCICAGANQKP--GETRLELVEKNLKIFKGIVSEVMASGFDGIFLVAT------NPV---DILTYATWK--FSGLPKE  141 (326)
T ss_dssp             SEEEECCSCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS------SSH---HHHHHHHHH--HHCCCGG
T ss_pred             CEEEEecccCCCC--CccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcC------ChH---HHHHHHHHH--hcCCCHH
Confidence            9999999864432  23467789999999999999998886544444443      111   000000000  0000111


Q ss_pred             chhhh-HHHHHHHHHHHHHHhcCCceEEEecceeeCCCCC
Q 023689          162 KWYPV-SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQ  200 (278)
Q Consensus       162 ~~y~~-sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~  200 (278)
                      ...|. +....-++....++..|++...++. .|.|+...
T Consensus       142 rviG~gt~LD~~R~~~~la~~lgv~~~~V~~-~V~GeHG~  180 (326)
T 3pqe_A          142 RVIGSGTTLDSARFRFMLSEYFGAAPQNVCA-HIIGEHGD  180 (326)
T ss_dssp             GEEECTTHHHHHHHHHHHHHHHTCCGGGEEC-CEEBSSST
T ss_pred             HEEeeccccHHHHHHHHHHHHhCCCHHHcee-eeeecCCC
Confidence            23444 3333444444555567888777775 68887643

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.12  E-value=1.7e-06  Score=73.19  Aligned_cols=78  Identities=13%  Similarity=0.070  Sum_probs=59.5

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      ...+++|+|+|+ |.||+.+++.|...|+ +|++.+|+++..+......+  . .   +..|..+.+++.+.++++|+||
T Consensus       163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga-~V~~~d~~~~~~~~~~~~~g--~-~---~~~~~~~~~~l~~~~~~~DvVi  234 (369)
T 2eez_A          163 GVAPASVVILGG-GTVGTNAAKIALGMGA-QVTILDVNHKRLQYLDDVFG--G-R---VITLTATEANIKKSVQHADLLI  234 (369)
T ss_dssp             BBCCCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTT--T-S---EEEEECCHHHHHHHHHHCSEEE
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcC--c-e---EEEecCCHHHHHHHHhCCCEEE
Confidence            356789999999 9999999999999999 89999887654433322111  0 2   4467778888999999999999


Q ss_pred             EecccC
Q 023689           86 HVASPC   91 (278)
Q Consensus        86 ~~a~~~   91 (278)
                      ++++..
T Consensus       235 ~~~g~~  240 (369)
T 2eez_A          235 GAVLVP  240 (369)
T ss_dssp             ECCC--
T ss_pred             ECCCCC
Confidence            998753

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=98.09  E-value=2e-05  Score=64.84  Aligned_cols=174  Identities=14%  Similarity=0.078  Sum_probs=99.4

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHC-CC-CeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEe
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDN-NY-TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~-g~-~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~   87 (278)
                      |||.|+||+|.+|..++..|... +. .++.+++.++........+..... .++.... .+  +...+.++++|+||..
T Consensus         1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~~~~G~a~Dl~~~~~-~~~v~~~-~~--~~~~~~~~~aDivii~   76 (312)
T 3hhp_A            1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPT-AVKIKGF-SG--EDATPALEGADVVLIS   76 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSSTTHHHHHHHHHTSCS-SEEEEEE-CS--SCCHHHHTTCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCCCchhHHHHhhCCCC-CceEEEe-cC--CCcHHHhCCCCEEEEe
Confidence            58999999999999999988775 43 478888776521111111111000 2222111 01  1235678999999999


Q ss_pred             cccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCE-EEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhh
Q 023689           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRR-VVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPV  166 (278)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~-~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~  166 (278)
                      ||.....  .......++.|......+.+.+.++.... ++.+|--......-  .....+....      -++....|.
T Consensus        77 ag~~rkp--G~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvtNPvd~~t~~--a~~~~k~sg~------~p~~rv~G~  146 (312)
T 3hhp_A           77 AGVARKP--GMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNPVNTTVAI--AAEVLKKAGV------YDKNKLFGV  146 (312)
T ss_dssp             CSCSCCT--TCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECSSCHHHHHHH--HHHHHHHTTC------CCTTSEEEC
T ss_pred             CCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEecCcchhHHHH--HHHHHHHcCC------CCcceEEEE
Confidence            9875432  23568899999999999999998876443 44444100000000  0000000000      012234555


Q ss_pred             HHHHHHHHHHHHHHhcCCceEEEecceeeCCC
Q 023689          167 SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPL  198 (278)
Q Consensus       167 sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~  198 (278)
                      +....-++....++..|++...++ +.|.|++
T Consensus       147 ~~LD~~R~~~~la~~lgv~~~~v~-~~V~G~H  177 (312)
T 3hhp_A          147 TTLDIIRSNTFVAELKGKQPGEVE-VPVIGGH  177 (312)
T ss_dssp             CHHHHHHHHHHHHHHHTCCGGGCC-CCEEECS
T ss_pred             echhHHHHHHHHHHHhCcChhHcc-eeEEecc
Confidence            533344455555566788888888 7888887

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.08  E-value=2.2e-06  Score=71.52  Aligned_cols=74  Identities=15%  Similarity=0.154  Sum_probs=52.8

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHh-----cCcc
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAV-----EGCK   82 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~-----~~~d   82 (278)
                      .+++||||||+|.||..+++.+...|+ .|++++++++..+..+.+      +.. ...|..+.+++.+.+     .++|
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~~~------g~~-~~~d~~~~~~~~~~~~~~~~~~~d  216 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLKQI------GFD-AAFNYKTVNSLEEALKKASPDGYD  216 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHT------TCS-EEEETTSCSCHHHHHHHHCTTCEE
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhc------CCc-EEEecCCHHHHHHHHHHHhCCCCe
Confidence            468999999999999999999999999 899988876554444333      111 124766633333333     2589


Q ss_pred             EEEEecc
Q 023689           83 GVFHVAS   89 (278)
Q Consensus        83 ~vi~~a~   89 (278)
                      ++|+++|
T Consensus       217 ~vi~~~g  223 (333)
T 1v3u_A          217 CYFDNVG  223 (333)
T ss_dssp             EEEESSC
T ss_pred             EEEECCC
Confidence            9999987

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=98.05  E-value=6.7e-06  Score=68.42  Aligned_cols=179  Identities=12%  Similarity=0.071  Sum_probs=101.0

Q ss_pred             CccccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccc-ccCCC-----CCCCceEEEEccCCChhhH
Q 023689            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL-FALPG-----AGDANLRVFEADVLDSGAV   74 (278)
Q Consensus         1 m~~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~-~~~~~-----~~~~~v~~~~~Dl~d~~~~   74 (278)
                      |+.++..+.|||.|+|| |.+|..++..|...|+.+|.+.+++++..+.. ..+..     ....+++.       ..++
T Consensus         1 ~~~~~~~~~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-------t~d~   72 (331)
T 1pzg_A            1 MAPALVQRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-------EYSY   72 (331)
T ss_dssp             --CCCCSCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-------ECSH
T ss_pred             CCcCcCCCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEE-------eCCH
Confidence            44444555579999998 99999999999998873588888876543321 10000     00002211       1345


Q ss_pred             HHHhcCccEEEEecccCCCCCCCC---chhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCC
Q 023689           75 SRAVEGCKGVFHVASPCTLEDPVD---PEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (278)
Q Consensus        75 ~~~~~~~d~vi~~a~~~~~~~~~~---~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~  151 (278)
                      .++++++|+||-.++.........   ........|+.....+.+.+.+.....++.+.|.-.-.         .++-..
T Consensus        73 ~ea~~~aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNP~~~---------~t~~~~  143 (331)
T 1pzg_A           73 EAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVTNPLDC---------MVKVMC  143 (331)
T ss_dssp             HHHHTTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHH---------HHHHHH
T ss_pred             HHHhCCCCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCchHH---------HHHHHH
Confidence            667899999999987643221100   34566888888999999999887645455445421100         000000


Q ss_pred             CchhhhhccCchhhh-HHHHHHHHHHHHHHhcCCceEEEecceeeCCCC
Q 023689          152 TDLEYCKSRKKWYPV-SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLM  199 (278)
Q Consensus       152 ~~~~~~~~~~~~y~~-sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~  199 (278)
                        .....++....|. +....-++....++..|++..-++ ..++|.+.
T Consensus       144 --~~~~~~~~rviG~gt~LD~~R~~~~la~~lgv~~~~v~-~~v~G~Hg  189 (331)
T 1pzg_A          144 --EASGVPTNMICGMACMLDSGRFRRYVADALSVSPRDVQ-ATVIGTHG  189 (331)
T ss_dssp             --HHHCCCGGGEEECCHHHHHHHHHHHHHHHHTSCGGGEE-CCEEBCSS
T ss_pred             --HhcCCChhcEEeccchHHHHHHHHHHHHHhCCCHHHce-EEEecCCC
Confidence              0000011123444 444444444445556678777777 47888754

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.03  E-value=2.6e-06  Score=70.10  Aligned_cols=83  Identities=8%  Similarity=0.039  Sum_probs=58.6

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCC---CCCccccc-CCCCCCCceEEEEccCCChhhHHHHhcCc
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG---SDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVEGC   81 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~---~~~~~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~   81 (278)
                      .+++|++||+|+ |++|+.++..|.+.|..+|++..|++   ++.+.+.. +....  .......++.+.+.+.+.+.++
T Consensus       151 ~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~--~~~~~~~~~~~~~~l~~~l~~a  227 (315)
T 3tnl_A          151 DIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKT--DCKAQLFDIEDHEQLRKEIAES  227 (315)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHS--SCEEEEEETTCHHHHHHHHHTC
T ss_pred             CccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhc--CCceEEeccchHHHHHhhhcCC
Confidence            356899999998 89999999999999987788888883   33222211 10000  2233345666777788889999


Q ss_pred             cEEEEecccC
Q 023689           82 KGVFHVASPC   91 (278)
Q Consensus        82 d~vi~~a~~~   91 (278)
                      |+||++....
T Consensus       228 DiIINaTp~G  237 (315)
T 3tnl_A          228 VIFTNATGVG  237 (315)
T ss_dssp             SEEEECSSTT
T ss_pred             CEEEECccCC
Confidence            9999987643

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.98  E-value=2.5e-06  Score=71.01  Aligned_cols=74  Identities=12%  Similarity=0.062  Sum_probs=52.8

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHH---hc--Ccc
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA---VE--GCK   82 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~---~~--~~d   82 (278)
                      .+++||||||+|.||..+++.+...|+ +|+++++++++.+.+..+      +... ..|..+.+..+++   ..  ++|
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~------g~~~-~~~~~~~~~~~~~~~~~~~~~~D  211 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKA------GAWQ-VINYREEDLVERLKEITGGKKVR  211 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHH------TCSE-EEETTTSCHHHHHHHHTTTCCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHc------CCCE-EEECCCccHHHHHHHHhCCCCce
Confidence            468999999999999999999999999 899998876554444332      1111 1366555433333   32  589


Q ss_pred             EEEEecc
Q 023689           83 GVFHVAS   89 (278)
Q Consensus        83 ~vi~~a~   89 (278)
                      ++|+++|
T Consensus       212 ~vi~~~g  218 (327)
T 1qor_A          212 VVYDSVG  218 (327)
T ss_dssp             EEEECSC
T ss_pred             EEEECCc
Confidence            9999987

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.98  E-value=4.2e-06  Score=70.15  Aligned_cols=96  Identities=16%  Similarity=0.099  Sum_probs=65.0

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChh---hHHHHhc--Ccc
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSG---AVSRAVE--GCK   82 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~---~~~~~~~--~~d   82 (278)
                      .+++|||+|++|.+|..+++.+...|+ .|+++++++++.+.+..+      +... ..|..+.+   .+.+...  ++|
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~------ga~~-~~d~~~~~~~~~~~~~~~~~~~d  237 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGA-RVIATAGSEDKLRRAKAL------GADE-TVNYTHPDWPKEVRRLTGGKGAD  237 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHH------TCSE-EEETTSTTHHHHHHHHTTTTCEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhc------CCCE-EEcCCcccHHHHHHHHhCCCCce
Confidence            468999999999999999999999999 899998876655444432      1111 14665543   3334432  689


Q ss_pred             EEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        83 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      +||+++|. ..                 ....++.++..|  +++.+++
T Consensus       238 ~vi~~~g~-~~-----------------~~~~~~~l~~~G--~~v~~g~  266 (343)
T 2eih_A          238 KVVDHTGA-LY-----------------FEGVIKATANGG--RIAIAGA  266 (343)
T ss_dssp             EEEESSCS-SS-----------------HHHHHHHEEEEE--EEEESSC
T ss_pred             EEEECCCH-HH-----------------HHHHHHhhccCC--EEEEEec
Confidence            99999872 21                 234455555544  7888775

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=97.96  E-value=5.1e-06  Score=69.86  Aligned_cols=75  Identities=15%  Similarity=0.092  Sum_probs=53.5

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhh---HHHHhc--Ccc
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGA---VSRAVE--GCK   82 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~---~~~~~~--~~d   82 (278)
                      .+++|||+||+|.||..+++.+...|+ .|+++++++++.+....+      +.. ...|..+.+.   +.+...  ++|
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~------ga~-~~~d~~~~~~~~~~~~~~~~~~~D  241 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQN------GAH-EVFNHREVNYIDKIKKYVGEKGID  241 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHT------TCS-EEEETTSTTHHHHHHHHHCTTCEE
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHc------CCC-EEEeCCCchHHHHHHHHcCCCCcE
Confidence            468999999999999999999999999 899998876655444433      111 1245555443   333333  689


Q ss_pred             EEEEeccc
Q 023689           83 GVFHVASP   90 (278)
Q Consensus        83 ~vi~~a~~   90 (278)
                      +||+++|.
T Consensus       242 ~vi~~~G~  249 (351)
T 1yb5_A          242 IIIEMLAN  249 (351)
T ss_dssp             EEEESCHH
T ss_pred             EEEECCCh
Confidence            99999863

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=97.95  E-value=5.5e-06  Score=65.49  Aligned_cols=69  Identities=13%  Similarity=0.053  Sum_probs=56.4

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHH-hcCccEEEEec
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFHVA   88 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~-~~~~d~vi~~a   88 (278)
                      ++++|+|+ |.+|+.+++.|.+.|+  |++++++++..+.+. .      ++.++.+|.+|++.+.++ ++++|.||.+.
T Consensus        10 ~~viI~G~-G~~G~~la~~L~~~g~--v~vid~~~~~~~~~~-~------~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~   79 (234)
T 2aef_A           10 RHVVICGW-SESTLECLRELRGSEV--FVLAEDENVRKKVLR-S------GANFVHGDPTRVSDLEKANVRGARAVIVDL   79 (234)
T ss_dssp             CEEEEESC-CHHHHHHHHHSTTSEE--EEEESCGGGHHHHHH-T------TCEEEESCTTCHHHHHHTTCTTCSEEEECC
T ss_pred             CEEEEECC-ChHHHHHHHHHHhCCe--EEEEECCHHHHHHHh-c------CCeEEEcCCCCHHHHHhcCcchhcEEEEcC
Confidence            58999998 9999999999999887  777777665443333 1      788999999999999887 88999999764

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=97.94  E-value=4e-06  Score=69.97  Aligned_cols=75  Identities=15%  Similarity=0.115  Sum_probs=53.2

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhh---HHHHh--cCcc
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGA---VSRAV--EGCK   82 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~---~~~~~--~~~d   82 (278)
                      .+++||||||+|.||..+++.+...|+ .|++++++++..+.+..+      +.. ...|..+.+.   +.+..  .++|
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~------g~~-~~~d~~~~~~~~~i~~~~~~~~~d  216 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGA-TVIGTVSTEEKAETARKL------GCH-HTINYSTQDFAEVVREITGGKGVD  216 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHH------TCS-EEEETTTSCHHHHHHHHHTTCCEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc------CCC-EEEECCCHHHHHHHHHHhCCCCCe
Confidence            468999999999999999999999999 899998876554444332      111 1135655443   33333  2689


Q ss_pred             EEEEeccc
Q 023689           83 GVFHVASP   90 (278)
Q Consensus        83 ~vi~~a~~   90 (278)
                      ++|+++|.
T Consensus       217 ~vi~~~g~  224 (333)
T 1wly_A          217 VVYDSIGK  224 (333)
T ss_dssp             EEEECSCT
T ss_pred             EEEECCcH
Confidence            99999874

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=97.93  E-value=4.9e-06  Score=69.74  Aligned_cols=75  Identities=16%  Similarity=0.139  Sum_probs=52.3

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHh-----cCc
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAV-----EGC   81 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~-----~~~   81 (278)
                      .+++|||+||+|.||..+++.+...|+ .|+++.+++++.+.+. .+      +... ..|..+.+++.+.+     .++
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~~------g~~~-~~d~~~~~~~~~~~~~~~~~~~  226 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGC-YVVGSAGSKEKVDLLKTKF------GFDD-AFNYKEESDLTAALKRCFPNGI  226 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTS------CCSE-EEETTSCSCSHHHHHHHCTTCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHc------CCce-EEecCCHHHHHHHHHHHhCCCC
Confidence            468999999999999999999999999 8999988765554443 33      1111 13655432233222     268


Q ss_pred             cEEEEeccc
Q 023689           82 KGVFHVASP   90 (278)
Q Consensus        82 d~vi~~a~~   90 (278)
                      |+||+++|.
T Consensus       227 d~vi~~~g~  235 (345)
T 2j3h_A          227 DIYFENVGG  235 (345)
T ss_dssp             EEEEESSCH
T ss_pred             cEEEECCCH
Confidence            999999763

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.90  E-value=2.7e-06  Score=66.14  Aligned_cols=72  Identities=17%  Similarity=0.093  Sum_probs=49.5

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEE-EccCCChhhHHHHhcCccEEEEec
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVF-EADVLDSGAVSRAVEGCKGVFHVA   88 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~-~~Dl~d~~~~~~~~~~~d~vi~~a   88 (278)
                      |+|+|+||+|++|+.+++.|.+.|+ +|++.+|+++..+.+....     +. .+ ..|+. .+++.++++++|+||++.
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~-----~~-~~~~~~~~-~~~~~~~~~~~D~Vi~~~   72 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLATLGH-EIVVGSRREEKAEAKAAEY-----RR-IAGDASIT-GMKNEDAAEACDIAVLTI   72 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSHHHHHHHHHHH-----HH-HHSSCCEE-EEEHHHHHHHCSEEEECS
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh-----cc-ccccCCCC-hhhHHHHHhcCCEEEEeC
Confidence            4799999999999999999999998 8999988765433322100     00 00 02232 245667788899999985


Q ss_pred             c
Q 023689           89 S   89 (278)
Q Consensus        89 ~   89 (278)
                      .
T Consensus        73 ~   73 (212)
T 1jay_A           73 P   73 (212)
T ss_dssp             C
T ss_pred             C
Confidence            3

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=97.89  E-value=5.4e-06  Score=69.80  Aligned_cols=75  Identities=8%  Similarity=-0.077  Sum_probs=53.2

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhh---HHHHhc--Ccc
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGA---VSRAVE--GCK   82 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~---~~~~~~--~~d   82 (278)
                      .+++|||+||+|.||..+++.+...|+ .|+++++++++.+.++.+      +.. ...|..+.+.   +.+...  ++|
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~------g~~-~~~~~~~~~~~~~~~~~~~~~~~d  233 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGA-IPLVTAGSQKKLQMAEKL------GAA-AGFNYKKEDFSEATLKFTKGAGVN  233 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHH------TCS-EEEETTTSCHHHHHHHHTTTSCEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHc------CCc-EEEecCChHHHHHHHHHhcCCCce
Confidence            468999999999999999999999999 899998876554444333      111 1245555433   333332  689


Q ss_pred             EEEEeccc
Q 023689           83 GVFHVASP   90 (278)
Q Consensus        83 ~vi~~a~~   90 (278)
                      ++|+++|.
T Consensus       234 ~vi~~~G~  241 (354)
T 2j8z_A          234 LILDCIGG  241 (354)
T ss_dssp             EEEESSCG
T ss_pred             EEEECCCc
Confidence            99999874

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=97.87  E-value=8.8e-06  Score=67.93  Aligned_cols=75  Identities=16%  Similarity=0.139  Sum_probs=53.3

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccc-ccCCCCCCCceEEEEccCCChhhHHHHh----cCcc
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL-FALPGAGDANLRVFEADVLDSGAVSRAV----EGCK   82 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~-~~~~~~~~~~v~~~~~Dl~d~~~~~~~~----~~~d   82 (278)
                      .+++|||+||+|.||..+++.+...|+ +|+++.+++++.+.+ +.+      +... ..|..+.+....+.    .++|
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~~------g~~~-~~~~~~~~~~~~~~~~~~~~~d  220 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGC-RVVGIAGGAEKCRFLVEEL------GFDG-AIDYKNEDLAAGLKRECPKGID  220 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTT------CCSE-EEETTTSCHHHHHHHHCTTCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHc------CCCE-EEECCCHHHHHHHHHhcCCCce
Confidence            468999999999999999999999999 899999877665555 343      2211 13555544333222    2589


Q ss_pred             EEEEeccc
Q 023689           83 GVFHVASP   90 (278)
Q Consensus        83 ~vi~~a~~   90 (278)
                      +||+++|.
T Consensus       221 ~vi~~~g~  228 (336)
T 4b7c_A          221 VFFDNVGG  228 (336)
T ss_dssp             EEEESSCH
T ss_pred             EEEECCCc
Confidence            99999864

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=97.87  E-value=7.6e-05  Score=62.34  Aligned_cols=98  Identities=10%  Similarity=0.098  Sum_probs=58.6

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEec
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a   88 (278)
                      |+||.|.||||++|+.+++.|.+++..+++++.++.+....+........ +.  ....+.+.+   + ++++|+||.+.
T Consensus         4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~~~-g~--~~~~~~~~~---~-~~~vDvV~~a~   76 (345)
T 2ozp_A            4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPNLR-GR--TNLKFVPPE---K-LEPADILVLAL   76 (345)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGGGT-TT--CCCBCBCGG---G-CCCCSEEEECC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCchhc-Cc--ccccccchh---H-hcCCCEEEEcC
Confidence            46999999999999999999988765466666554333222221110000 00  001223322   2 47899999886


Q ss_pred             ccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecce
Q 023689           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSI  132 (278)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~  132 (278)
                      +...                  ...+.+.+.+.|. ++|-.|+.
T Consensus        77 g~~~------------------s~~~a~~~~~aG~-~VId~Sa~  101 (345)
T 2ozp_A           77 PHGV------------------FAREFDRYSALAP-VLVDLSAD  101 (345)
T ss_dssp             CTTH------------------HHHTHHHHHTTCS-EEEECSST
T ss_pred             CcHH------------------HHHHHHHHHHCCC-EEEEcCcc
Confidence            5421                  3345566667775 58888863

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=97.87  E-value=3.1e-05  Score=66.34  Aligned_cols=72  Identities=15%  Similarity=0.173  Sum_probs=60.8

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHH-hcCccEEEEe
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFHV   87 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~-~~~~d~vi~~   87 (278)
                      .++|+|+|. |-+|+.+++.|.+.|+ .|++++++++..+.+...      ++.++.+|.++++.+.++ ++++|+||-+
T Consensus         4 ~~~viIiG~-Gr~G~~va~~L~~~g~-~vvvId~d~~~v~~~~~~------g~~vi~GDat~~~~L~~agi~~A~~viv~   75 (413)
T 3l9w_A            4 GMRVIIAGF-GRFGQITGRLLLSSGV-KMVVLDHDPDHIETLRKF------GMKVFYGDATRMDLLESAGAAKAEVLINA   75 (413)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTC-CEEEEECCHHHHHHHHHT------TCCCEESCTTCHHHHHHTTTTTCSEEEEC
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHhC------CCeEEEcCCCCHHHHHhcCCCccCEEEEC
Confidence            368999997 9999999999999999 899999988765555433      677899999999999887 7889999866


Q ss_pred             c
Q 023689           88 A   88 (278)
Q Consensus        88 a   88 (278)
                      .
T Consensus        76 ~   76 (413)
T 3l9w_A           76 I   76 (413)
T ss_dssp             C
T ss_pred             C
Confidence            3

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=97.82  E-value=4.3e-05  Score=62.96  Aligned_cols=166  Identities=12%  Similarity=0.032  Sum_probs=92.7

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccc-ccCCC-----CCCCceEEEEccCCChhhHHHHhcCccE
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL-FALPG-----AGDANLRVFEADVLDSGAVSRAVEGCKG   83 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~-~~~~~-----~~~~~v~~~~~Dl~d~~~~~~~~~~~d~   83 (278)
                      |||.|+|+ |.+|..++..|...|+.+|.+.+++++..+.. ..+..     ....++...    +   +. ++++++|+
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t----~---d~-~a~~~aD~   73 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT----N---NY-ADTANSDV   73 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE----S---CG-GGGTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEEC----C---CH-HHHCCCCE
Confidence            68999999 99999999999999963588887765433211 01100     000012111    1   23 46889999


Q ss_pred             EEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCch
Q 023689           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW  163 (278)
Q Consensus        84 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  163 (278)
                      ||.+++......  .........|......+.+.+.+.+...++.+.|.-.      .   .+.+-..  .....++...
T Consensus        74 Vi~a~g~p~~~g--~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNPv------~---~~t~~~~--~~~~~~~~rv  140 (309)
T 1ur5_A           74 IVVTSGAPRKPG--MSREDLIKVNADITRACISQAAPLSPNAVIIMVNNPL------D---AMTYLAA--EVSGFPKERV  140 (309)
T ss_dssp             EEECCCC----------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECCSSH------H---HHHHHHH--HHHCCCGGGE
T ss_pred             EEEcCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcCCch------H---HHHHHHH--HHcCCCHHHE
Confidence            999998654322  2234567889999999999998887666666565211      0   0000000  0000011134


Q ss_pred             hhh-HHHHHHHHHHHHHHhcCCceEEEecceeeCCC
Q 023689          164 YPV-SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPL  198 (278)
Q Consensus       164 y~~-sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~  198 (278)
                      .|. +....-++....++..|++...++. .+.|++
T Consensus       141 iG~gt~LD~~r~~~~la~~lgv~~~~v~~-~v~G~H  175 (309)
T 1ur5_A          141 IGQAGVLDAARYRTFIAMEAGVSVEDVQA-MLMGGH  175 (309)
T ss_dssp             EECCHHHHHHHHHHHHHHHHTCCGGGEEE-CCEECS
T ss_pred             EECCcchHHHHHHHHHHHHhCCChhheeE-EEecCc
Confidence            455 4443444555555566776666664 667765

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=97.82  E-value=1.1e-05  Score=67.88  Aligned_cols=73  Identities=14%  Similarity=0.094  Sum_probs=50.6

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCCCCCCceEEEEccCCChhh---HHHHhc-CccEE
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGA---VSRAVE-GCKGV   84 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~~~~Dl~d~~~---~~~~~~-~~d~v   84 (278)
                      ++||||||+|.||..+++.+...|+.+|+++.++++..+.+.. +      +.. ...|..+.+.   +.+... ++|++
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~------g~~-~~~d~~~~~~~~~~~~~~~~~~d~v  234 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSEL------GFD-AAINYKKDNVAEQLRESCPAGVDVY  234 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTS------CCS-EEEETTTSCHHHHHHHHCTTCEEEE
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc------CCc-eEEecCchHHHHHHHHhcCCCCCEE
Confidence            8999999999999999999999998578888886654444432 2      111 1246655432   232222 58999


Q ss_pred             EEecc
Q 023689           85 FHVAS   89 (278)
Q Consensus        85 i~~a~   89 (278)
                      |+++|
T Consensus       235 i~~~G  239 (357)
T 2zb4_A          235 FDNVG  239 (357)
T ss_dssp             EESCC
T ss_pred             EECCC
Confidence            99987

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=97.82  E-value=7e-05  Score=61.89  Aligned_cols=169  Identities=15%  Similarity=0.106  Sum_probs=93.6

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCC-CeEEEEecCCCCCcc-cccCCCCC--CCceEEEEccCCChhhHHHHhcCccE
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSH-LFALPGAG--DANLRVFEADVLDSGAVSRAVEGCKG   83 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~-~~~~~~~~--~~~v~~~~~Dl~d~~~~~~~~~~~d~   83 (278)
                      +++||.|+|+ |.+|..++-.|...|. .+|.+.+.++++.+. ...+....  ...+++. .  .+    .++++++|+
T Consensus         6 ~~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~--~~----~~a~~~aDv   77 (318)
T 1y6j_A            6 SRSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLY-A--GD----YSDVKDCDV   77 (318)
T ss_dssp             -CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----C----GGGGTTCSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEE-E--CC----HHHhCCCCE
Confidence            3478999998 9999999999998875 478888876654332 11111100  0033222 1  12    345899999


Q ss_pred             EEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCch
Q 023689           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW  163 (278)
Q Consensus        84 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  163 (278)
                      ||..++.....  .......+..|+.....+.+.+.+++...+|.+.|.-. .        .+++-..  .....++...
T Consensus        78 Vii~~g~p~k~--g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv-~--------~~~~~~~--k~s~~p~~rv  144 (318)
T 1y6j_A           78 IVVTAGANRKP--GETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSNPV-D--------IITYMIQ--KWSGLPVGKV  144 (318)
T ss_dssp             EEECCCC--------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECSSSH-H--------HHHHHHH--HHHTCCTTTE
T ss_pred             EEEcCCCCCCC--CcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEecCcH-H--------HHHHHHH--HHcCCCHHHE
Confidence            99999864422  22356778999999999999998876454555454211 0        0000000  0000011123


Q ss_pred             hhh-HHHHHHHHHHHHHHhcCCceEEEecceeeCCC
Q 023689          164 YPV-SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPL  198 (278)
Q Consensus       164 y~~-sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~  198 (278)
                      .|. +..-.-++....++..|++...++. .+.|++
T Consensus       145 iG~gt~Ld~~r~~~~la~~lgv~~~~v~~-~v~G~H  179 (318)
T 1y6j_A          145 IGSGTVLDSIRFRYLLSEKLGVDVKNVHG-YIIGEH  179 (318)
T ss_dssp             EECTTHHHHHHHHHHHHTTTTCCTTTEEC-CEEBCS
T ss_pred             eccCCchHHHHHHHHHHHHhCCCHHHeEE-EEeccc
Confidence            344 3333344444455566887777776 777876

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=97.78  E-value=2.9e-05  Score=64.17  Aligned_cols=117  Identities=15%  Similarity=0.134  Sum_probs=75.1

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCC-CeEEEEecCCCCCccc----c-cCCCCCCCceEEEEccCCChhhHHHH
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHL----F-ALPGAGDANLRVFEADVLDSGAVSRA   77 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~----~-~~~~~~~~~v~~~~~Dl~d~~~~~~~   77 (278)
                      |.+.+++||.|+|+ |.+|..++..|...|. .+|.+.+++++..+..    . ....... .+++.. |  +    .++
T Consensus         1 m~~~~~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~-~~~i~~-~--~----~~a   71 (316)
T 1ldn_A            1 MKNNGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPK-PVDIWH-G--D----YDD   71 (316)
T ss_dssp             CTTTTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSS-CCEEEE-C--C----GGG
T ss_pred             CCCCCCCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCC-CeEEEc-C--c----HHH
Confidence            44455689999999 9999999999988763 4788888865422211    0 1110000 233322 1  2    246


Q ss_pred             hcCccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           78 VEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        78 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      ++++|+||.+++.......  .....+..|......+.+.+.+.....++++-|
T Consensus        72 l~~aDvViia~~~~~~~g~--~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~t  123 (316)
T 1ldn_A           72 CRDADLVVICAGANQKPGE--TRLDLVDKNIAIFRSIVESVMASGFQGLFLVAT  123 (316)
T ss_dssp             TTTCSEEEECCSCCCCTTT--CSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             hCCCCEEEEcCCCCCCCCC--CHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeC
Confidence            8899999999987554332  335668888888889999888876443444333

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.76  E-value=2.7e-05  Score=63.92  Aligned_cols=74  Identities=20%  Similarity=0.112  Sum_probs=53.9

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEe
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~   87 (278)
                      .+++|||+|++|.+|..+++.+...|+ +|+++.+++++.+..+.+      +...+ .|..+.+++.+.+.++|+||+ 
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~------ga~~~-~~~~~~~~~~~~~~~~d~vid-  195 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLAL------GAEEA-ATYAEVPERAKAWGGLDLVLE-  195 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHHT------TCSEE-EEGGGHHHHHHHTTSEEEEEE-
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhc------CCCEE-EECCcchhHHHHhcCceEEEE-
Confidence            467999999999999999999999999 899999877666555443      22111 354441234444588999999 


Q ss_pred             ccc
Q 023689           88 ASP   90 (278)
Q Consensus        88 a~~   90 (278)
                      +|.
T Consensus       196 ~g~  198 (302)
T 1iz0_A          196 VRG  198 (302)
T ss_dssp             CSC
T ss_pred             CCH
Confidence            764

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=97.76  E-value=1.6e-05  Score=69.21  Aligned_cols=71  Identities=21%  Similarity=0.291  Sum_probs=59.6

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHH-hcCccEEEE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFH   86 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~-~~~~d~vi~   86 (278)
                      .|+|+|.|+ |-+|++|++.|.++|+ +|+++.++++..+.+. .+      ++..+.||-++++.+.++ ++++|.+|-
T Consensus         3 ~M~iiI~G~-G~vG~~la~~L~~~~~-~v~vId~d~~~~~~~~~~~------~~~~i~Gd~~~~~~L~~Agi~~ad~~ia   74 (461)
T 4g65_A            3 AMKIIILGA-GQVGGTLAENLVGENN-DITIVDKDGDRLRELQDKY------DLRVVNGHASHPDVLHEAGAQDADMLVA   74 (461)
T ss_dssp             CEEEEEECC-SHHHHHHHHHTCSTTE-EEEEEESCHHHHHHHHHHS------SCEEEESCTTCHHHHHHHTTTTCSEEEE
T ss_pred             cCEEEEECC-CHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHhc------CcEEEEEcCCCHHHHHhcCCCcCCEEEE
Confidence            478999998 9999999999999999 8999988876655443 23      678899999999999987 788999874


Q ss_pred             e
Q 023689           87 V   87 (278)
Q Consensus        87 ~   87 (278)
                      +
T Consensus        75 ~   75 (461)
T 4g65_A           75 V   75 (461)
T ss_dssp             C
T ss_pred             E
Confidence            3

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=97.76  E-value=4.7e-05  Score=63.96  Aligned_cols=98  Identities=13%  Similarity=0.137  Sum_probs=57.4

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEecc
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a~   89 (278)
                      +||.|.||+|++|+.+++.|.+++..+++++.++.+....+..........+   ..|+.-.+  .+.++++|+||.+.+
T Consensus        17 ~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~~~~v---~~dl~~~~--~~~~~~vDvVf~atp   91 (359)
T 1xyg_A           17 IRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLRAQK---LPTLVSVK--DADFSTVDAVFCCLP   91 (359)
T ss_dssp             EEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGGTTSC---CCCCBCGG--GCCGGGCSEEEECCC
T ss_pred             cEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchhcCcc---cccceecc--hhHhcCCCEEEEcCC
Confidence            5899999999999999999998765467766554332222211000000011   12332222  334568999998875


Q ss_pred             cCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecce
Q 023689           90 PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSI  132 (278)
Q Consensus        90 ~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~  132 (278)
                      ...                  +......+ +.|. ++|-.|+.
T Consensus        92 ~~~------------------s~~~a~~~-~aG~-~VId~sa~  114 (359)
T 1xyg_A           92 HGT------------------TQEIIKEL-PTAL-KIVDLSAD  114 (359)
T ss_dssp             TTT------------------HHHHHHTS-CTTC-EEEECSST
T ss_pred             chh------------------HHHHHHHH-hCCC-EEEECCcc
Confidence            422                  23455555 6665 57777763

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.76  E-value=3.6e-05  Score=62.16  Aligned_cols=71  Identities=10%  Similarity=0.091  Sum_probs=53.3

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      +++|+++|+|+ |++|+.++..|.+.|+.+|++..|+.++.+.+..       .+..     ...+++.++++++|+||+
T Consensus       115 l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~-------~~~~-----~~~~~~~~~~~~aDiVIn  181 (277)
T 3don_A          115 IEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWSL-------NINK-----INLSHAESHLDEFDIIIN  181 (277)
T ss_dssp             GGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCS-------CCEE-----ECHHHHHHTGGGCSEEEE
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH-------hccc-----ccHhhHHHHhcCCCEEEE
Confidence            46789999998 8999999999999998678888888766554432       2221     134567777889999999


Q ss_pred             eccc
Q 023689           87 VASP   90 (278)
Q Consensus        87 ~a~~   90 (278)
                      +...
T Consensus       182 aTp~  185 (277)
T 3don_A          182 TTPA  185 (277)
T ss_dssp             CCC-
T ss_pred             CccC
Confidence            8654

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=97.75  E-value=2.8e-05  Score=64.42  Aligned_cols=174  Identities=14%  Similarity=0.156  Sum_probs=95.2

Q ss_pred             CccccccCCceEEEeCcchhhHHHHHHHHHHCCC-CeEEEEecCCCCCcc----cccCCCCCCCceEEEEccCCChhhHH
Q 023689            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSH----LFALPGAGDANLRVFEADVLDSGAVS   75 (278)
Q Consensus         1 m~~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~----~~~~~~~~~~~v~~~~~Dl~d~~~~~   75 (278)
                      |.+..+.+.+||.|+|| |.+|..++..|+..+. .++.+++.+.++.+.    +........ .+++.. |  +    .
T Consensus         1 ~~~~~~~~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~-~~~i~~-~--~----~   71 (326)
T 2zqz_A            1 MASITDKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTS-PKKIYS-A--E----Y   71 (326)
T ss_dssp             -----CCCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSC-CCEEEE-C--C----G
T ss_pred             CCccccCCCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcC-CeEEEE-C--C----H
Confidence            45555666689999999 9999999999988774 468878775432211    111000001 333332 1  2    4


Q ss_pred             HHhcCccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCC-EEEEecceeeeecCCCCCCccccCCCCCch
Q 023689           76 RAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTSSISAIVPNPGWKGKVFDETSWTDL  154 (278)
Q Consensus        76 ~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~-~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~  154 (278)
                      ++++++|+||..++.....  .......+..|+.....+.+.+++++.. .++.+ |      +|-.   .+++-..  .
T Consensus        72 ~a~~~aDvVii~ag~~~k~--g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~-t------NPv~---~~t~~~~--k  137 (326)
T 2zqz_A           72 SDAKDADLVVITAGAPQKP--GETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVA-A------NPVD---ILTYATW--K  137 (326)
T ss_dssp             GGGGGCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEEC-S------SSHH---HHHHHHH--H
T ss_pred             HHhCCCCEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEe-C------CcHH---HHHHHHH--H
Confidence            4588999999999864432  2345677889999999999999887644 34444 3      1110   0000000  0


Q ss_pred             hhhhccCchhhh-HHHHHHHHHHHHHHhcCCceEEEecceeeCCC
Q 023689          155 EYCKSRKKWYPV-SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPL  198 (278)
Q Consensus       155 ~~~~~~~~~y~~-sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~  198 (278)
                      ....++....|. +....-++....++..|++...++ +.++|++
T Consensus       138 ~s~~p~~rviG~gt~LD~~R~~~~la~~lgv~~~~v~-~~v~G~H  181 (326)
T 2zqz_A          138 LSGFPKNRVVGSGTSLDTARFRQSIAEMVNVDARSVH-AYIMGEH  181 (326)
T ss_dssp             HHCCCGGGEEECTTHHHHHHHHHHHHHHHTCCGGGEE-CCEEBSS
T ss_pred             HcCCCHHHEEEccccchHHHHHHHHHHHhCCChhheE-EEEeccc
Confidence            000011122344 333334444444556688777777 7888875

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=97.74  E-value=7.7e-06  Score=66.16  Aligned_cols=76  Identities=14%  Similarity=0.121  Sum_probs=50.9

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      +++|+++|+|+ |++|+.++..|.+.|+ +|++..|+.++.+.+....+... .+     +..+.+++.+  .++|+||+
T Consensus       117 l~~k~vlViGa-Gg~g~a~a~~L~~~G~-~V~v~~R~~~~~~~la~~~~~~~-~~-----~~~~~~~~~~--~~~DivVn  186 (271)
T 1nyt_A          117 RPGLRILLIGA-GGASRGVLLPLLSLDC-AVTITNRTVSRAEELAKLFAHTG-SI-----QALSMDELEG--HEFDLIIN  186 (271)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHTGGGS-SE-----EECCSGGGTT--CCCSEEEE
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHhhccC-Ce-----eEecHHHhcc--CCCCEEEE
Confidence            45789999998 7899999999999997 89988887655433322111000 11     2223333322  68999999


Q ss_pred             ecccCC
Q 023689           87 VASPCT   92 (278)
Q Consensus        87 ~a~~~~   92 (278)
                      +++...
T Consensus       187 ~t~~~~  192 (271)
T 1nyt_A          187 ATSSGI  192 (271)
T ss_dssp             CCSCGG
T ss_pred             CCCCCC
Confidence            998644

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.73  E-value=4.4e-05  Score=64.51  Aligned_cols=74  Identities=14%  Similarity=0.101  Sum_probs=55.6

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      .+.+|||+|+ |.||..+++.+...|+ .|+++++++++.+... .+      +... ..|..+.+.+.++..++|+||+
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~l------Ga~~-v~~~~~~~~~~~~~~~~D~vid  257 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGS-KVTVISTSPSKKEEALKNF------GADS-FLVSRDQEQMQAAAGTLDGIID  257 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESCGGGHHHHHHTS------CCSE-EEETTCHHHHHHTTTCEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhc------CCce-EEeccCHHHHHHhhCCCCEEEE
Confidence            5679999996 9999999999999999 8998888766544433 33      2211 1356666777777778999999


Q ss_pred             eccc
Q 023689           87 VASP   90 (278)
Q Consensus        87 ~a~~   90 (278)
                      +++.
T Consensus       258 ~~g~  261 (366)
T 1yqd_A          258 TVSA  261 (366)
T ss_dssp             CCSS
T ss_pred             CCCc
Confidence            9875

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=97.73  E-value=4.3e-05  Score=62.16  Aligned_cols=112  Identities=13%  Similarity=0.035  Sum_probs=74.6

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCC-CeEEEEecCCCCCcc----ccc-CCCCCCCceEEEEccCCChhhHHHHhcCccE
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSH----LFA-LPGAGDANLRVFEADVLDSGAVSRAVEGCKG   83 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~----~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~   83 (278)
                      |||-|+|+ |.||+.++-.|..++. .++.+++.++...+-    +.. ...... ..+....  .|+    +.++++|+
T Consensus         1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~-~~~i~~~--~d~----~~~~~aDv   72 (294)
T 2x0j_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDK-YPKIVGG--ADY----SLLKGSEI   72 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTC-CCEEEEE--SCG----GGGTTCSE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCC-CCeEecC--CCH----HHhCCCCE
Confidence            58999996 9999999999888774 678888775432110    100 000000 2222221  122    35789999


Q ss_pred             EEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        84 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      ||-.||...-.  .......++.|....+.+.+.+.+++...++.+-|
T Consensus        73 VvitAG~prkp--GmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvs  118 (294)
T 2x0j_A           73 IVVTAGLARKP--GMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT  118 (294)
T ss_dssp             EEECCCCCCCS--SSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred             EEEecCCCCCC--CCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEec
Confidence            99999975532  24578899999999999999999987665665554

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.72  E-value=2.3e-05  Score=64.19  Aligned_cols=79  Identities=11%  Similarity=0.049  Sum_probs=55.8

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      .+++|+++|+|+ |.+|+.++..|.+.|+.+|++..|+.++.+.+....+.   ..    .++.+.+++.+.+.++|+||
T Consensus       138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~---~~----~~~~~~~~~~~~~~~aDivI  209 (297)
T 2egg_A          138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDE---RR----SAYFSLAEAETRLAEYDIII  209 (297)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCS---SS----CCEECHHHHHHTGGGCSEEE
T ss_pred             CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhh---cc----CceeeHHHHHhhhccCCEEE
Confidence            346789999998 78999999999999976888888876554444321110   00    02223356777888999999


Q ss_pred             EecccCC
Q 023689           86 HVASPCT   92 (278)
Q Consensus        86 ~~a~~~~   92 (278)
                      ++.+...
T Consensus       210 n~t~~~~  216 (297)
T 2egg_A          210 NTTSVGM  216 (297)
T ss_dssp             ECSCTTC
T ss_pred             ECCCCCC
Confidence            9987643

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=97.68  E-value=1.9e-05  Score=66.37  Aligned_cols=75  Identities=15%  Similarity=0.103  Sum_probs=53.0

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhh---HHHHh-cCccE
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGA---VSRAV-EGCKG   83 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~---~~~~~-~~~d~   83 (278)
                      .+++|||+||+|.||..+++.+...|+ +|+++++++++.+.++.+..    .. .  .|..+.+.   +.+.. .++|+
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lGa----~~-~--~~~~~~~~~~~~~~~~~~g~Dv  238 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGA-EVYATAGSTGKCEACERLGA----KR-G--INYRSEDFAAVIKAETGQGVDI  238 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTC----SE-E--EETTTSCHHHHHHHHHSSCEEE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCC----CE-E--EeCCchHHHHHHHHHhCCCceE
Confidence            468999999999999999999999999 89999987766555544311    11 1  34444432   22222 26899


Q ss_pred             EEEeccc
Q 023689           84 VFHVASP   90 (278)
Q Consensus        84 vi~~a~~   90 (278)
                      ||+++|.
T Consensus       239 vid~~g~  245 (353)
T 4dup_A          239 ILDMIGA  245 (353)
T ss_dssp             EEESCCG
T ss_pred             EEECCCH
Confidence            9999874

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=97.67  E-value=1.9e-05  Score=64.89  Aligned_cols=82  Identities=13%  Similarity=0.035  Sum_probs=55.6

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCC---CCccccc-CCCCCCCceEEEEccCCChhhHHHHhcCcc
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS---DSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVEGCK   82 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~---~~~~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d   82 (278)
                      .++|++||+|+ |++|+.++..|.+.|..+|++..|+++   +.+.+.. +....  .......+..+.+.+.+.+.++|
T Consensus       146 l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~--~~~v~~~~~~~l~~~~~~l~~~D  222 (312)
T 3t4e_A          146 MRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENT--DCVVTVTDLADQHAFTEALASAD  222 (312)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHS--SCEEEEEETTCHHHHHHHHHHCS
T ss_pred             cCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhcc--CcceEEechHhhhhhHhhccCce
Confidence            46789999998 899999999999999878988888833   3332221 10000  22233345555444567778899


Q ss_pred             EEEEecccC
Q 023689           83 GVFHVASPC   91 (278)
Q Consensus        83 ~vi~~a~~~   91 (278)
                      +||++....
T Consensus       223 iIINaTp~G  231 (312)
T 3t4e_A          223 ILTNGTKVG  231 (312)
T ss_dssp             EEEECSSTT
T ss_pred             EEEECCcCC
Confidence            999987653

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=97.67  E-value=0.00012  Score=60.41  Aligned_cols=114  Identities=11%  Similarity=0.109  Sum_probs=74.6

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCC-CeEEEEecCCCCCcc----ccc-CCCCCCCceEEEEccCCChhhHHHHhcC
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSH----LFA-LPGAGDANLRVFEADVLDSGAVSRAVEG   80 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~----~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~~   80 (278)
                      .+++||.|+|+ |.+|..++..|...|. .++.+.+.+++..+.    +.. ...... .+++.. |  +    .+++++
T Consensus         4 m~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~-~~~v~~-~--~----~~a~~~   74 (317)
T 3d0o_A            4 FKGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPT-TVRVKA-G--E----YSDCHD   74 (317)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSS-CCEEEE-C--C----GGGGTT
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCC-CeEEEe-C--C----HHHhCC
Confidence            34579999999 9999999999998774 478888765432211    000 000000 333322 1  2    445889


Q ss_pred             ccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           81 CKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        81 ~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      +|+||..++.....  .......+..|+.....+.+.+.++....++.+.|
T Consensus        75 aDvVvi~ag~~~~~--g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t  123 (317)
T 3d0o_A           75 ADLVVICAGAAQKP--GETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVAT  123 (317)
T ss_dssp             CSEEEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             CCEEEECCCCCCCC--CCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Confidence            99999999874432  23456778999999999999998886554555454

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=97.66  E-value=9.7e-05  Score=60.81  Aligned_cols=112  Identities=16%  Similarity=0.149  Sum_probs=72.9

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCC--CCCccc-ccCCC-----CCCCceEEEEccCCChhhHHHHhc
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG--SDSSHL-FALPG-----AGDANLRVFEADVLDSGAVSRAVE   79 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~--~~~~~~-~~~~~-----~~~~~v~~~~~Dl~d~~~~~~~~~   79 (278)
                      +++||.|+|+ |.+|..++..|...|+.+|++.++++  ...+-. ..+..     ....++..  .  .|    .+.++
T Consensus         7 ~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~--t--~d----~~a~~   77 (315)
T 3tl2_A            7 KRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIG--T--SD----YADTA   77 (315)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEE--E--SC----GGGGT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEE--c--CC----HHHhC
Confidence            4579999997 99999999999998874677887763  211110 00000     00001111  0  12    24678


Q ss_pred             CccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCE-EEEec
Q 023689           80 GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRR-VVVTS  130 (278)
Q Consensus        80 ~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~-~v~~S  130 (278)
                      ++|+||.+||.....  .......++.|+.....+.+.+.+++... ++.+|
T Consensus        78 ~aDvVIiaag~p~kp--g~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvs  127 (315)
T 3tl2_A           78 DSDVVVITAGIARKP--GMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLT  127 (315)
T ss_dssp             TCSEEEECCSCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             CCCEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECC
Confidence            999999999875432  23467889999999999999998876444 44444

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.66  E-value=0.00016  Score=59.04  Aligned_cols=86  Identities=16%  Similarity=0.124  Sum_probs=57.8

Q ss_pred             cCCce-EEEeCcc------------------hhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCC-----------C
Q 023689            7 KEEET-VCVTGAN------------------GFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPG-----------A   56 (278)
Q Consensus         7 ~~~~~-vlItGat------------------G~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~-----------~   56 (278)
                      +.|++ ||||+|.                  |-.|.++++.+++.|+ .|+.+.+..........++.           .
T Consensus        34 l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga-~V~lv~g~~sl~p~~r~~~~~~~~~~~~~~~~  112 (313)
T 1p9o_A           34 AQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGY-GVLFLYRARSAFPYAHRFPPQTWLSALRPSGP  112 (313)
T ss_dssp             HTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTC-EEEEEEETTSCCTTGGGSCHHHHHHHCEECCC
T ss_pred             hcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCC-EEEEEecCCCcCcchhccCccchhhhhccccc
Confidence            46777 9999654                  7799999999999999 88888875543222111110           0


Q ss_pred             CCCceEEEEccCCChhhHHHHh-------------------------------------cCccEEEEecccCCC
Q 023689           57 GDANLRVFEADVLDSGAVSRAV-------------------------------------EGCKGVFHVASPCTL   93 (278)
Q Consensus        57 ~~~~v~~~~~Dl~d~~~~~~~~-------------------------------------~~~d~vi~~a~~~~~   93 (278)
                      ...++..+..|+.....+.+++                                     .+.|++|++|++...
T Consensus       113 ~~~~~~~i~v~v~sa~~m~~av~~~~~~~~~~~l~~i~f~tv~eyl~~L~~~~~~l~~~~~~di~i~aAAVsDf  186 (313)
T 1p9o_A          113 ALSGLLSLEAEENALPGFAEALRSYQEAAAAGTFLVVEFTTLADYLHLLQAAAQALNPLGPSAMFYLAAAVSDF  186 (313)
T ss_dssp             -CCSEEEEEEETTTSTTHHHHHHHHHHHHHHTCEEEEEECBHHHHHHHHHHHHHHHGGGGGGEEEEECSBCCSE
T ss_pred             cccccceeeeccccHHHHHHHHHHHhhhhccccceeeccccHHHHHHHHHHhhHHhhccCCCCEEEECCchhhc
Confidence            1115566777777665555544                                     468999999998553

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.65  E-value=1.8e-05  Score=66.65  Aligned_cols=77  Identities=17%  Similarity=0.111  Sum_probs=55.7

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      .++++|+|+|+ |.+|+.+++.+...|+ +|++.+|++++.+.+......   .+..   +..+.+.+.+.++++|+||+
T Consensus       165 l~~~~VlViGa-GgvG~~aa~~a~~~Ga-~V~v~dr~~~r~~~~~~~~~~---~~~~---~~~~~~~~~~~~~~~DvVI~  236 (361)
T 1pjc_A          165 VKPGKVVILGG-GVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGS---RVEL---LYSNSAEIETAVAEADLLIG  236 (361)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGG---GSEE---EECCHHHHHHHHHTCSEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhhCc---eeEe---eeCCHHHHHHHHcCCCEEEE
Confidence            45689999999 9999999999999999 899999877654444322100   1211   12345567778889999999


Q ss_pred             ecccC
Q 023689           87 VASPC   91 (278)
Q Consensus        87 ~a~~~   91 (278)
                      +++..
T Consensus       237 ~~~~~  241 (361)
T 1pjc_A          237 AVLVP  241 (361)
T ss_dssp             CCCCT
T ss_pred             CCCcC
Confidence            98753

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=97.63  E-value=0.00018  Score=57.84  Aligned_cols=72  Identities=17%  Similarity=0.248  Sum_probs=44.9

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEE-ecCCCCC--cccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINAT-VFPGSDS--SHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~-~r~~~~~--~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      |+||.|+|++|.+|+.+++.+.+....++++. +|+.+..  .....+.+..        .++.-.+++.++++++|+||
T Consensus         7 mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~--------~gv~v~~dl~~ll~~~DVVI   78 (272)
T 4f3y_A            7 SMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQ--------TGVALTDDIERVCAEADYLI   78 (272)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCC--------CSCBCBCCHHHHHHHCSEEE
T ss_pred             ccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCC--------CCceecCCHHHHhcCCCEEE
Confidence            57999999999999999999987643266654 5543321  1111111100        02222345666777899999


Q ss_pred             Eec
Q 023689           86 HVA   88 (278)
Q Consensus        86 ~~a   88 (278)
                      +++
T Consensus        79 DfT   81 (272)
T 4f3y_A           79 DFT   81 (272)
T ss_dssp             ECS
T ss_pred             EcC
Confidence            985

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=97.62  E-value=7e-06  Score=72.69  Aligned_cols=105  Identities=16%  Similarity=0.071  Sum_probs=60.4

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHH-HhcCccEEE
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSR-AVEGCKGVF   85 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~-~~~~~d~vi   85 (278)
                      +++|+++|||| |++|+.++..|.+.|+ .|++..|+.++.+.+....+  . .+.    ++.|   +.+ ....+|++|
T Consensus       362 l~~k~vlV~Ga-GGig~aia~~L~~~G~-~V~i~~R~~~~a~~la~~~~--~-~~~----~~~d---l~~~~~~~~DilV  429 (523)
T 2o7s_A          362 LASKTVVVIGA-GGAGKALAYGAKEKGA-KVVIANRTYERALELAEAIG--G-KAL----SLTD---LDNYHPEDGMVLA  429 (523)
T ss_dssp             ----CEEEECC-SHHHHHHHHHHHHHCC--CEEEESSHHHHHHHHHHTT--C--CE----ETTT---TTTC--CCSEEEE
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcC--C-cee----eHHH---hhhccccCceEEE
Confidence            45789999999 6999999999999999 88888887655443322111  0 111    1222   222 124589999


Q ss_pred             EecccCCCC---------CCCCchhhhhhhHHhHH-HHHHHHHHhcCC
Q 023689           86 HVASPCTLE---------DPVDPEKELILPAVQGT-LNVLEAAKRFGV  123 (278)
Q Consensus        86 ~~a~~~~~~---------~~~~~~~~~~~~n~~~~-~~ll~~~~~~~~  123 (278)
                      |+++.....         ...+.+...+++|..+. -.+++.+++.|.
T Consensus       430 N~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~~T~ll~~a~~~G~  477 (523)
T 2o7s_A          430 NTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRITRLLREAEESGA  477 (523)
T ss_dssp             ECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSSSCHHHHHHHTTTC
T ss_pred             ECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCccCHHHHHHHHCCC
Confidence            999864210         11223456677776542 245666666553

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=97.62  E-value=1.2e-05  Score=65.23  Aligned_cols=80  Identities=16%  Similarity=0.245  Sum_probs=54.9

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCCCCCCceEEEEccCCChhhHHHHhcCccEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~v   84 (278)
                      ..++|+++|+|+ |++|+.++..|.+.|..+|++..|+.++.+.+.. +..... .+.+...+   .+++.+.++++|+|
T Consensus       124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~-~~~i~~~~---~~~l~~~l~~~DiV  198 (283)
T 3jyo_A          124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVG-REAVVGVD---ARGIEDVIAAADGV  198 (283)
T ss_dssp             TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHT-SCCEEEEC---STTHHHHHHHSSEE
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcC-CceEEEcC---HHHHHHHHhcCCEE
Confidence            356789999998 8999999999999998678888887765544322 100000 12222233   34567778889999


Q ss_pred             EEeccc
Q 023689           85 FHVASP   90 (278)
Q Consensus        85 i~~a~~   90 (278)
                      |++...
T Consensus       199 InaTp~  204 (283)
T 3jyo_A          199 VNATPM  204 (283)
T ss_dssp             EECSST
T ss_pred             EECCCC
Confidence            998754

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.60  E-value=7.5e-05  Score=62.39  Aligned_cols=75  Identities=15%  Similarity=0.185  Sum_probs=54.0

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChh---hHHHHhc--Ccc
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSG---AVSRAVE--GCK   82 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~---~~~~~~~--~~d   82 (278)
                      .+++|||+||+|.||...++.+...|+ +|+++++++++.+.++++..    .. .  .|..+.+   .+.+...  ++|
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lga----~~-~--~~~~~~~~~~~~~~~~~~~g~D  215 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNF-RLIAVTRNNKHTEELLRLGA----AY-V--IDTSTAPLYETVMELTNGIGAD  215 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTC----SE-E--EETTTSCHHHHHHHHTTTSCEE
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhCCC----cE-E--EeCCcccHHHHHHHHhCCCCCc
Confidence            468999999999999999999988999 89999998877666554311    11 1  2444433   3333332  689


Q ss_pred             EEEEeccc
Q 023689           83 GVFHVASP   90 (278)
Q Consensus        83 ~vi~~a~~   90 (278)
                      +||+++|.
T Consensus       216 vvid~~g~  223 (340)
T 3gms_A          216 AAIDSIGG  223 (340)
T ss_dssp             EEEESSCH
T ss_pred             EEEECCCC
Confidence            99999864

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=97.60  E-value=0.0001  Score=61.05  Aligned_cols=115  Identities=12%  Similarity=0.073  Sum_probs=75.5

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCC-CeEEEEecCCCCCcc----cccCCCCCCCceEEEEccCCChhhHHHHhcCc
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSH----LFALPGAGDANLRVFEADVLDSGAVSRAVEGC   81 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~----~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~   81 (278)
                      ..++||.|+|+ |.+|..++..|+..|. +++.+.+++.+..+-    +........ ....+..  .|+    +.++++
T Consensus        17 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~-~~~i~~~--~d~----~~~~~a   88 (331)
T 4aj2_A           17 VPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLK-TPKIVSS--KDY----SVTANS   88 (331)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCS-CCEEEEC--SSG----GGGTTE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccC-CCeEEEc--CCH----HHhCCC
Confidence            34679999998 9999999999999886 478888775432211    111000000 1122221  122    258999


Q ss_pred             cEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        82 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      |+||.+||.....  .......++.|+.....+.+.+.++....++.+-|
T Consensus        89 DiVvi~aG~~~kp--G~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvt  136 (331)
T 4aj2_A           89 KLVIITAGARQQE--GESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVS  136 (331)
T ss_dssp             EEEEECCSCCCCT--TCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             CEEEEccCCCCCC--CccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            9999999875432  24567899999999999999998886444444433

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.59  E-value=6.3e-05  Score=62.66  Aligned_cols=75  Identities=13%  Similarity=0.085  Sum_probs=53.3

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChh---hHHHHhc--Ccc
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSG---AVSRAVE--GCK   82 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~---~~~~~~~--~~d   82 (278)
                      .+++|||+||+|.||...++.+...|+ +|+++.+++++.+..+.+..    .. .  .|..+.+   .+.+...  ++|
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga----~~-~--~~~~~~~~~~~~~~~~~~~g~D  219 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGA-HTIAVASTDEKLKIAKEYGA----EY-L--INASKEDILRQVLKFTNGKGVD  219 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTC----SE-E--EETTTSCHHHHHHHHTTTSCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCC----cE-E--EeCCCchHHHHHHHHhCCCCce
Confidence            468999999999999999999999999 89999987766555544411    11 1  3443433   3333332  589


Q ss_pred             EEEEeccc
Q 023689           83 GVFHVASP   90 (278)
Q Consensus        83 ~vi~~a~~   90 (278)
                      +||+++|.
T Consensus       220 ~vid~~g~  227 (334)
T 3qwb_A          220 ASFDSVGK  227 (334)
T ss_dssp             EEEECCGG
T ss_pred             EEEECCCh
Confidence            99999874

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=97.58  E-value=4.4e-05  Score=64.00  Aligned_cols=75  Identities=17%  Similarity=0.174  Sum_probs=53.2

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHC-CCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhh---HHHHh--cCc
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGA---VSRAV--EGC   81 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~-g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~---~~~~~--~~~   81 (278)
                      .+++|||+|++|.||..+++.+... |+ .|++++++++..+..+.+.   . .. .  .|..+.+.   +.+..  .++
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga-~Vi~~~~~~~~~~~~~~~g---~-~~-~--~~~~~~~~~~~~~~~~~~~~~  241 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGA-TIIGVDVREEAVEAAKRAG---A-DY-V--INASMQDPLAEIRRITESKGV  241 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCC-EEEEEESSHHHHHHHHHHT---C-SE-E--EETTTSCHHHHHHHHTTTSCE
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHHHHhC---C-CE-E--ecCCCccHHHHHHHHhcCCCc
Confidence            4689999999999999999999998 99 8998888765544443331   0 21 1  34544433   45554  369


Q ss_pred             cEEEEeccc
Q 023689           82 KGVFHVASP   90 (278)
Q Consensus        82 d~vi~~a~~   90 (278)
                      |+||+++|.
T Consensus       242 d~vi~~~g~  250 (347)
T 1jvb_A          242 DAVIDLNNS  250 (347)
T ss_dssp             EEEEESCCC
T ss_pred             eEEEECCCC
Confidence            999999874

>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}

Probab=97.58  E-value=0.0002  Score=60.07  Aligned_cols=34  Identities=29%  Similarity=0.355  Sum_probs=28.5

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecC
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFP   43 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~   43 (278)
                      +||.|.||+|++|+.+++.|.+++..+|+++.++
T Consensus         9 ~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s   42 (354)
T 1ys4_A            9 IKVGVLGATGSVGQRFVQLLADHPMFELTALAAS   42 (354)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEEC
T ss_pred             ceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcc
Confidence            6899999999999999999988764477777653

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=97.58  E-value=4.7e-05  Score=64.31  Aligned_cols=71  Identities=10%  Similarity=0.098  Sum_probs=51.0

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCC---CCCcccccCCCCCCCceEEEEccCCC--hhhHHHHhcCccE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG---SDSSHLFALPGAGDANLRVFEADVLD--SGAVSRAVEGCKG   83 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~---~~~~~~~~~~~~~~~~v~~~~~Dl~d--~~~~~~~~~~~d~   83 (278)
                      +++|||+|+ |.||..+++.+...|+ .|+++++++   ++.+..+.+      ++..+  | .+  .+.+.+.-.++|+
T Consensus       181 g~~VlV~Ga-G~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~~~------ga~~v--~-~~~~~~~~~~~~~~~d~  249 (366)
T 2cdc_A          181 CRKVLVVGT-GPIGVLFTLLFRTYGL-EVWMANRREPTEVEQTVIEET------KTNYY--N-SSNGYDKLKDSVGKFDV  249 (366)
T ss_dssp             TCEEEEESC-HHHHHHHHHHHHHHTC-EEEEEESSCCCHHHHHHHHHH------TCEEE--E-CTTCSHHHHHHHCCEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC-EEEEEeCCccchHHHHHHHHh------CCcee--c-hHHHHHHHHHhCCCCCE
Confidence            789999999 9999999999999999 899999877   444433333      34444  5 44  1233331147999


Q ss_pred             EEEeccc
Q 023689           84 VFHVASP   90 (278)
Q Consensus        84 vi~~a~~   90 (278)
                      ||+++|.
T Consensus       250 vid~~g~  256 (366)
T 2cdc_A          250 IIDATGA  256 (366)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999875

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=97.57  E-value=7e-05  Score=61.87  Aligned_cols=110  Identities=16%  Similarity=0.157  Sum_probs=71.3

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcc----ccc---CCCCCCCceEEEEccCCChhhHHHHhcCc
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSH----LFA---LPGAGDANLRVFEADVLDSGAVSRAVEGC   81 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~----~~~---~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~   81 (278)
                      ++||.|+|+ |.+|..++..|...|+.+|.+.+++++..+.    +..   ... ...++.. ..   |   . ++++++
T Consensus         7 ~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~-~~~~v~~-t~---d---~-~a~~~a   76 (324)
T 3gvi_A            7 RNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDG-FDAKFTG-AN---D---Y-AAIEGA   76 (324)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHT-CCCCEEE-ES---S---G-GGGTTC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcC-CCCEEEE-eC---C---H-HHHCCC
Confidence            579999998 9999999999999886467788877654321    110   000 0002211 11   2   2 578999


Q ss_pred             cEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEec
Q 023689           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS  130 (278)
Q Consensus        82 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~S  130 (278)
                      |+||..+|......  ......+..|+.....+.+.+.+++...++.+-
T Consensus        77 DiVIiaag~p~k~G--~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivv  123 (324)
T 3gvi_A           77 DVVIVTAGVPRKPG--MSRDDLLGINLKVMEQVGAGIKKYAPEAFVICI  123 (324)
T ss_dssp             SEEEECCSCCCC-------CHHHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred             CEEEEccCcCCCCC--CCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEec
Confidence            99999998644322  234567889999999999999888644444433

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=97.56  E-value=0.00025  Score=61.03  Aligned_cols=94  Identities=10%  Similarity=0.172  Sum_probs=61.0

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCC-C--CeEEEEecCCCCCcccccCCCCCCCceEEEEccCCCh---hhHHHHhcCccE
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNN-Y--TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS---GAVSRAVEGCKG   83 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g-~--~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~---~~~~~~~~~~d~   83 (278)
                      ++|+|.|+ |.||+.++..|.++. +  ..|+..+......+.....      ++++...++++.   +.+.+++++.|+
T Consensus        14 ~rVlIIGa-GgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~~~~------g~~~~~~~Vdadnv~~~l~aLl~~~Dv   86 (480)
T 2ph5_A           14 NRFVILGF-GCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQQY------GVSFKLQQITPQNYLEVIGSTLEENDF   86 (480)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHHHH------TCEEEECCCCTTTHHHHTGGGCCTTCE
T ss_pred             CCEEEECc-CHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHHhhc------CCceeEEeccchhHHHHHHHHhcCCCE
Confidence            57999995 999999999999874 3  2566666544433222221      456666666544   335556766799


Q ss_pred             EEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        84 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      |||++-. .     .            ...++++|.+.|+   -|++|
T Consensus        87 VIN~s~~-~-----~------------~l~Im~acleaGv---~YlDT  113 (480)
T 2ph5_A           87 LIDVSIG-I-----S------------SLALIILCNQKGA---LYINA  113 (480)
T ss_dssp             EEECCSS-S-----C------------HHHHHHHHHHHTC---EEEES
T ss_pred             EEECCcc-c-----c------------CHHHHHHHHHcCC---CEEEC
Confidence            9986522 1     1            3468999999984   45554

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.55  E-value=9.8e-05  Score=61.73  Aligned_cols=76  Identities=24%  Similarity=0.141  Sum_probs=53.0

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCCh-hhHHHHhc--CccEE
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS-GAVSRAVE--GCKGV   84 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~-~~~~~~~~--~~d~v   84 (278)
                      .+++|||+||+|.||...++.+...|+ +|+++.+++++.+..+.+.     .-..+..+ .+. +.+.+...  ++|+|
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~g-----a~~v~~~~-~~~~~~v~~~~~~~g~Dvv  231 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGA-KVIAVVNRTAATEFVKSVG-----ADIVLPLE-EGWAKAVREATGGAGVDMV  231 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHT-----CSEEEESS-TTHHHHHHHHTTTSCEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcC-----CcEEecCc-hhHHHHHHHHhCCCCceEE
Confidence            468999999999999999999999999 8999998777665555431     11223233 221 23444433  58999


Q ss_pred             EEeccc
Q 023689           85 FHVASP   90 (278)
Q Consensus        85 i~~a~~   90 (278)
                      |+++|.
T Consensus       232 id~~g~  237 (342)
T 4eye_A          232 VDPIGG  237 (342)
T ss_dssp             EESCC-
T ss_pred             EECCch
Confidence            999874

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.54  E-value=8.2e-05  Score=59.24  Aligned_cols=104  Identities=13%  Similarity=0.058  Sum_probs=65.7

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc--------------------CCCC-CCCceEEEE
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA--------------------LPGA-GDANLRVFE   65 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~--------------------~~~~-~~~~v~~~~   65 (278)
                      ++.++|+|.|+ |.+|+++++.|...|..++++++++.-....+..                    +... ....++.+.
T Consensus        29 l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~  107 (249)
T 1jw9_B           29 LKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVN  107 (249)
T ss_dssp             HHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEe
Confidence            45679999997 8999999999999998688888776522211111                    0000 011455666


Q ss_pred             ccCCChhhHHHHhcCccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEec
Q 023689           66 ADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS  130 (278)
Q Consensus        66 ~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~S  130 (278)
                      .++. .+.+.+.++++|+||.+...         ..        .-..+.++|++.++ .+|+.+
T Consensus       108 ~~~~-~~~~~~~~~~~DvVi~~~d~---------~~--------~~~~l~~~~~~~~~-p~i~~~  153 (249)
T 1jw9_B          108 ALLD-DAELAALIAEHDLVLDCTDN---------VA--------VRNQLNAGCFAAKV-PLVSGA  153 (249)
T ss_dssp             SCCC-HHHHHHHHHTSSEEEECCSS---------HH--------HHHHHHHHHHHHTC-CEEEEE
T ss_pred             ccCC-HhHHHHHHhCCCEEEEeCCC---------HH--------HHHHHHHHHHHcCC-CEEEee
Confidence            6665 35677788999999987421         11        12345567777764 466654

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=97.53  E-value=5.5e-05  Score=62.79  Aligned_cols=100  Identities=18%  Similarity=0.144  Sum_probs=57.9

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCC---CCCccccc----CCCCCCCceEEEEccCCChhhHHHHhcC
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG---SDSSHLFA----LPGAGDANLRVFEADVLDSGAVSRAVEG   80 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~---~~~~~~~~----~~~~~~~~v~~~~~Dl~d~~~~~~~~~~   80 (278)
                      .|+||.|+||||++|+.|++.|.++...++..+..+.   .....+..    +.+..  .+.+...  .+.+   +++++
T Consensus         3 ~M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~--~~~v~~~--~~~~---~~~~~   75 (337)
T 3dr3_A            3 AMLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIV--ELPLQPM--SDIS---EFSPG   75 (337)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTC--CCBEEEE--SSGG---GTCTT
T ss_pred             CceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCcc--ceeEecc--CCHH---HHhcC
Confidence            4689999999999999999999986443666665443   22222211    11110  1222111  0222   23378


Q ss_pred             ccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEeccee
Q 023689           81 CKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSIS  133 (278)
Q Consensus        81 ~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~  133 (278)
                      +|+||-+.+...                  ...+...+.+.|. ++|-.|+..
T Consensus        76 ~Dvvf~a~p~~~------------------s~~~~~~~~~~g~-~vIDlSa~f  109 (337)
T 3dr3_A           76 VDVVFLATAHEV------------------SHDLAPQFLEAGC-VVFDLSGAF  109 (337)
T ss_dssp             CSEEEECSCHHH------------------HHHHHHHHHHTTC-EEEECSSTT
T ss_pred             CCEEEECCChHH------------------HHHHHHHHHHCCC-EEEEcCCcc
Confidence            999997754211                  3345555666775 688888743

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.53  E-value=5.2e-05  Score=62.92  Aligned_cols=75  Identities=17%  Similarity=0.142  Sum_probs=53.0

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChh---hHHHHhc--Ccc
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSG---AVSRAVE--GCK   82 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~---~~~~~~~--~~d   82 (278)
                      .+++|||+||+|.+|...++.+...|+ +|+++++++++.+..+.+..    . ..  .|..+.+   .+.+...  ++|
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~Ga----~-~~--~~~~~~~~~~~~~~~~~~~g~D  211 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGA-KLIGTVSSPEKAAHAKALGA----W-ET--IDYSHEDVAKRVLELTDGKKCP  211 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTC----S-EE--EETTTSCHHHHHHHHTTTCCEE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCC----C-EE--EeCCCccHHHHHHHHhCCCCce
Confidence            468999999999999999999999999 89999887765555444311    1 12  3444433   3333333  689


Q ss_pred             EEEEeccc
Q 023689           83 GVFHVASP   90 (278)
Q Consensus        83 ~vi~~a~~   90 (278)
                      +||+++|.
T Consensus       212 vvid~~g~  219 (325)
T 3jyn_A          212 VVYDGVGQ  219 (325)
T ss_dssp             EEEESSCG
T ss_pred             EEEECCCh
Confidence            99999874

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=97.53  E-value=0.00014  Score=59.73  Aligned_cols=112  Identities=14%  Similarity=0.091  Sum_probs=71.4

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCC-CeEEEEecCCCCCcc----cccC-CCCCCCceEEEEccCCChhhHHHHhcCccE
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSH----LFAL-PGAGDANLRVFEADVLDSGAVSRAVEGCKG   83 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~----~~~~-~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~   83 (278)
                      |||.|+|+ |.+|..++..|...|. .++.+.+++++..+-    +... ..... ..++...|  +    .++++++|+
T Consensus         1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~-~~~v~~~~--~----~~a~~~aDv   72 (314)
T 3nep_X            1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGF-DTRVTGTN--D----YGPTEDSDV   72 (314)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTC-CCEEEEES--S----SGGGTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCC-CcEEEECC--C----HHHhCCCCE
Confidence            58999997 9999999999998875 478888887754321    1100 00000 12222111  1    346889999


Q ss_pred             EEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        84 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      ||.+||......  ......+..|+.....+.+.+.+++...++.+-|
T Consensus        73 Vii~ag~~~kpG--~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt  118 (314)
T 3nep_X           73 CIITAGLPRSPG--MSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVA  118 (314)
T ss_dssp             EEECCCC---------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECC
T ss_pred             EEECCCCCCCCC--CCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecC
Confidence            999998754322  3457889999999999999999886544444443

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.53  E-value=5.2e-05  Score=63.92  Aligned_cols=97  Identities=19%  Similarity=0.144  Sum_probs=63.4

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChh---hHHHHh-cCccE
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSG---AVSRAV-EGCKG   83 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~---~~~~~~-~~~d~   83 (278)
                      .+++|||+||+|.+|..+++.+...|+ +|+++++++++.+.++.+      +...+ .|..+.+   .+.+.. .++|+
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~------Ga~~~-~~~~~~~~~~~~~~~~~~g~D~  234 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKC-HVIGTCSSDEKSAFLKSL------GCDRP-INYKTEPVGTVLKQEYPEGVDV  234 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHT------TCSEE-EETTTSCHHHHHHHHCTTCEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHc------CCcEE-EecCChhHHHHHHHhcCCCCCE
Confidence            467999999999999999999999999 899998876555544443      22111 2333332   222222 26899


Q ss_pred             EEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecce
Q 023689           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSI  132 (278)
Q Consensus        84 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~  132 (278)
                      ||++++.           .       .....++.++..  ++++.+++.
T Consensus       235 vid~~g~-----------~-------~~~~~~~~l~~~--G~iv~~g~~  263 (362)
T 2c0c_A          235 VYESVGG-----------A-------MFDLAVDALATK--GRLIVIGFI  263 (362)
T ss_dssp             EEECSCT-----------H-------HHHHHHHHEEEE--EEEEECCCG
T ss_pred             EEECCCH-----------H-------HHHHHHHHHhcC--CEEEEEeCC
Confidence            9999763           0       123455555554  478888763

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=97.53  E-value=0.00027  Score=58.91  Aligned_cols=94  Identities=26%  Similarity=0.238  Sum_probs=54.9

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCC--CeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEe
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNY--TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~--~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~   87 (278)
                      ++|+|.||||.+|+.+++.|.++++  .+++.+.........+. +.+  . .+.+.  |. +++    .++++|+||.+
T Consensus         7 ~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~~~-~~g--~-~i~~~--~~-~~~----~~~~~DvV~~a   75 (340)
T 2hjs_A            7 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMG-FAE--S-SLRVG--DV-DSF----DFSSVGLAFFA   75 (340)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEE-ETT--E-EEECE--EG-GGC----CGGGCSEEEEC
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCccc-cCC--c-ceEEe--cC-CHH----HhcCCCEEEEc
Confidence            6899999999999999999996654  24444432211111111 110  0 22221  22 122    25689999988


Q ss_pred             cccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEeccee
Q 023689           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSIS  133 (278)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~  133 (278)
                      .+..                  ....+++.+.+.|+ ++|.+|+..
T Consensus        76 ~g~~------------------~s~~~a~~~~~aG~-kvId~Sa~~  102 (340)
T 2hjs_A           76 AAAE------------------VSRAHAERARAAGC-SVIDLSGAL  102 (340)
T ss_dssp             SCHH------------------HHHHHHHHHHHTTC-EEEETTCTT
T ss_pred             CCcH------------------HHHHHHHHHHHCCC-EEEEeCCCC
Confidence            6531                  13456677777786 477777643

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=97.53  E-value=5.2e-05  Score=63.10  Aligned_cols=171  Identities=18%  Similarity=0.072  Sum_probs=98.7

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCC------CeEEEEecCCCCC--c----ccccCCCCCCCceEEEEccCCChhhHHHH
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNY------TSINATVFPGSDS--S----HLFALPGAGDANLRVFEADVLDSGAVSRA   77 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~------~~v~~~~r~~~~~--~----~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~   77 (278)
                      .||.|+||+|.||+.|+-.|.....      .++.+++..+...  +    .+....  .......+..     ....++
T Consensus        25 vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~--~~~~~~~~~~-----~~~~~a   97 (345)
T 4h7p_A           25 VKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCA--FPLLDKVVVT-----ADPRVA   97 (345)
T ss_dssp             EEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTT--CTTEEEEEEE-----SCHHHH
T ss_pred             CEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcC--ccCCCcEEEc-----CChHHH
Confidence            4999999999999999988876532      1566666543211  0    011100  0001122211     124677


Q ss_pred             hcCccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcC-CCE-EEEecceeeeecCCCCCCccccCC-CCCch
Q 023689           78 VEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRR-VVVTSSISAIVPNPGWKGKVFDET-SWTDL  154 (278)
Q Consensus        78 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~-~v~~Ss~~~~~~~~~~~~~~~~E~-~~~~~  154 (278)
                      ++++|+||-.||...-..  ......++.|....+.+.+...++. ... ++.+|- -. .....   ...... ..+.+
T Consensus        98 ~~~advVvi~aG~prkpG--mtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsN-Pv-d~~~~---i~~~~~~g~~~~  170 (345)
T 4h7p_A           98 FDGVAIAIMCGAFPRKAG--MERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGN-PA-NTNAL---ILLKSAQGKLNP  170 (345)
T ss_dssp             TTTCSEEEECCCCCCCTT--CCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS-SH-HHHHH---HHHHHTTTCSCG
T ss_pred             hCCCCEEEECCCCCCCCC--CCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCC-Cc-chHHH---HHHHHccCCCCc
Confidence            899999999998755322  3568899999999999999998763 333 444441 10 00000   000000 00011


Q ss_pred             hhhhccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCC
Q 023689          155 EYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQ  200 (278)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~  200 (278)
                            ...-+.+....-++-...+++.|++...++-..|.|+...
T Consensus       171 ------r~i~~~t~LDs~R~~~~la~~~~v~~~~V~~~~V~G~HG~  210 (345)
T 4h7p_A          171 ------RHVTAMTRLDHNRALSLLARKAGVPVSQVRNVIIWGNHSS  210 (345)
T ss_dssp             ------GGEEECCHHHHHHHHHHHHHHHTSCGGGEECCEEEBCSST
T ss_pred             ------ceeeeccchhHHHHHHHHHHHHCcChhheecceeecCCCC
Confidence                  1234455555556666666677898888887778787643

>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*

Probab=97.51  E-value=0.00046  Score=58.69  Aligned_cols=76  Identities=16%  Similarity=0.093  Sum_probs=54.2

Q ss_pred             Cccccc--cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHh
Q 023689            1 MASEAE--KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAV   78 (278)
Q Consensus         1 m~~m~~--~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~   78 (278)
                      |+.|++  +.+|+|+|+|+ |.+|+.+++.+.+.|+ +|++++.++.....  .+      .-..+..|..|.+.+.+++
T Consensus         4 ~~~m~~~~~~~k~IlIlG~-G~~g~~la~aa~~~G~-~vi~~d~~~~~~~~--~~------ad~~~~~~~~d~~~l~~~~   73 (389)
T 3q2o_A            4 MLDMTRIILPGKTIGIIGG-GQLGRMMALAAKEMGY-KIAVLDPTKNSPCA--QV------ADIEIVASYDDLKAIQHLA   73 (389)
T ss_dssp             ---CCCCCCTTSEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESSTTCTTT--TT------CSEEEECCTTCHHHHHHHH
T ss_pred             cccccccCCCCCEEEEECC-CHHHHHHHHHHHHcCC-EEEEEeCCCCCchH--Hh------CCceEecCcCCHHHHHHHH
Confidence            445543  45789999987 7899999999999999 88888765432111  11      2235568999999999999


Q ss_pred             cCccEEEE
Q 023689           79 EGCKGVFH   86 (278)
Q Consensus        79 ~~~d~vi~   86 (278)
                      +.+|+|..
T Consensus        74 ~~~dvI~~   81 (389)
T 3q2o_A           74 EISDVVTY   81 (389)
T ss_dssp             HTCSEEEE
T ss_pred             HhCCEeee
Confidence            99998743

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=97.51  E-value=0.00043  Score=58.61  Aligned_cols=70  Identities=14%  Similarity=0.179  Sum_probs=54.0

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      ..+|+|+|+|+ |.+|+.+++.+.+.|+ +|++++..+.....  .+      .-.++..|..|.+.+.++++.+|+|..
T Consensus        10 ~~~~~IlIlG~-G~lg~~la~aa~~lG~-~viv~d~~~~~p~~--~~------ad~~~~~~~~d~~~l~~~~~~~dvi~~   79 (377)
T 3orq_A           10 KFGATIGIIGG-GQLGKMMAQSAQKMGY-KVVVLDPSEDCPCR--YV------AHEFIQAKYDDEKALNQLGQKCDVITY   79 (377)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESCTTCTTG--GG------SSEEEECCTTCHHHHHHHHHHCSEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCC-EEEEEECCCCChhh--hh------CCEEEECCCCCHHHHHHHHHhCCccee
Confidence            35789999987 8899999999999999 88888765432111  11      224677999999999999999998753

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.51  E-value=1.2e-05  Score=58.38  Aligned_cols=72  Identities=6%  Similarity=0.067  Sum_probs=51.6

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEe
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~   87 (278)
                      .+++|+|+|+ |.+|+.+++.|.+.|+ .|++..|+++..+.+....     +.     ++...+++.++++++|+||.+
T Consensus        20 ~~~~v~iiG~-G~iG~~~a~~l~~~g~-~v~v~~r~~~~~~~~a~~~-----~~-----~~~~~~~~~~~~~~~Divi~a   87 (144)
T 3oj0_A           20 GGNKILLVGN-GMLASEIAPYFSYPQY-KVTVAGRNIDHVRAFAEKY-----EY-----EYVLINDIDSLIKNNDVIITA   87 (144)
T ss_dssp             CCCEEEEECC-SHHHHHHGGGCCTTTC-EEEEEESCHHHHHHHHHHH-----TC-----EEEECSCHHHHHHTCSEEEEC
T ss_pred             cCCEEEEECC-CHHHHHHHHHHHhCCC-EEEEEcCCHHHHHHHHHHh-----CC-----ceEeecCHHHHhcCCCEEEEe
Confidence            3689999997 9999999999999999 5888888766544332210     11     112234567778899999998


Q ss_pred             cccC
Q 023689           88 ASPC   91 (278)
Q Consensus        88 a~~~   91 (278)
                      .+..
T Consensus        88 t~~~   91 (144)
T 3oj0_A           88 TSSK   91 (144)
T ss_dssp             SCCS
T ss_pred             CCCC
Confidence            7653

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=97.51  E-value=0.00019  Score=58.47  Aligned_cols=167  Identities=12%  Similarity=0.051  Sum_probs=98.5

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCC-CeEEEEecCCCCCc--c--ccc-CCCCCCCceEEEEccCCChhhHHHHhcCccE
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSS--H--LFA-LPGAGDANLRVFEADVLDSGAVSRAVEGCKG   83 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~--~--~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~   83 (278)
                      |||.|+|+ |.+|..++..|...|+ .+|.+.+++++..+  .  +.. ...... ..++...  +|    .++++++|+
T Consensus         1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~-~~~i~~t--~d----~~a~~~aDi   72 (294)
T 1oju_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDK-YPKIVGG--AD----YSLLKGSEI   72 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTC-CCEEEEE--SC----GGGGTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCC-CCEEEEe--CC----HHHhCCCCE
Confidence            58999999 9999999999998886 37888888665432  0  100 000000 1222111  12    457899999


Q ss_pred             EEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCch
Q 023689           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW  163 (278)
Q Consensus        84 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  163 (278)
                      ||..|+.....  .......+..|+.....+.+.+.+++...++.+-|.-. .-...   ...+...       .++...
T Consensus        73 VViaag~~~kp--G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsNPv-d~~t~---~~~k~~g-------~p~~rv  139 (294)
T 1oju_A           73 IVVTAGLARKP--GMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPM-DVMTY---IMWKESG-------KPRNEV  139 (294)
T ss_dssp             EEECCCCCCCS--SCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSSH-HHHHH---HHHHHSC-------CCTTSE
T ss_pred             EEECCCCCCCC--CCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcc-hHHHH---HHHHhcC-------CCHHHE
Confidence            99999865432  23467789999999999999999886544444433110 00000   0000000       011234


Q ss_pred             hhh-HHHHHHHHHHHHHHhcCCceEEEecceeeCCCCC
Q 023689          164 YPV-SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQ  200 (278)
Q Consensus       164 y~~-sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~  200 (278)
                      .|. +....-++....+ +.|++...  -+.|.|++..
T Consensus       140 iG~gt~LD~~R~~~~la-~l~v~~~~--~~~V~G~Hg~  174 (294)
T 1oju_A          140 FGMGNQLDSQRLKERLY-NAGARNIR--RAWIIGEHGD  174 (294)
T ss_dssp             EECSHHHHHHHHHHHHH-HTTCBSCC--CCCEEBCSST
T ss_pred             eecccccHHHHHHHHHH-HhCCCccC--ceEEEecCCC
Confidence            555 4555555555566 77887777  5678887643

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=97.50  E-value=0.0001  Score=57.40  Aligned_cols=66  Identities=18%  Similarity=0.206  Sum_probs=47.7

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEe
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~   87 (278)
                      .+|+|.|+| +|.+|+.+++.|.+.|+ +|++.+|+++..+.+...      ++...        ++.++++++|+||.+
T Consensus        27 ~~~~I~iiG-~G~~G~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~------g~~~~--------~~~~~~~~~DvVi~a   90 (215)
T 2vns_A           27 EAPKVGILG-SGDFARSLATRLVGSGF-KVVVGSRNPKRTARLFPS------AAQVT--------FQEEAVSSPEVIFVA   90 (215)
T ss_dssp             --CCEEEEC-CSHHHHHHHHHHHHTTC-CEEEEESSHHHHHHHSBT------TSEEE--------EHHHHTTSCSEEEEC
T ss_pred             CCCEEEEEc-cCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc------CCcee--------cHHHHHhCCCEEEEC
Confidence            457899999 69999999999999998 888888876544333221      23221        356678899999987


Q ss_pred             cc
Q 023689           88 AS   89 (278)
Q Consensus        88 a~   89 (278)
                      ..
T Consensus        91 v~   92 (215)
T 2vns_A           91 VF   92 (215)
T ss_dssp             SC
T ss_pred             CC
Confidence            54

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=97.49  E-value=8.2e-06  Score=66.58  Aligned_cols=79  Identities=10%  Similarity=0.059  Sum_probs=50.0

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      +++|+++|||++ ++|+.++..|.+.|  +|++..|+.++.+.+.. +........ .+.+|+.+.   .+.+.++|+||
T Consensus       126 l~~k~vlV~GaG-giG~aia~~L~~~G--~V~v~~r~~~~~~~l~~~~~~~~~~~~-~~~~d~~~~---~~~~~~~DilV  198 (287)
T 1nvt_A          126 VKDKNIVIYGAG-GAARAVAFELAKDN--NIIIANRTVEKAEALAKEIAEKLNKKF-GEEVKFSGL---DVDLDGVDIII  198 (287)
T ss_dssp             CCSCEEEEECCS-HHHHHHHHHHTSSS--EEEEECSSHHHHHHHHHHHHHHHTCCH-HHHEEEECT---TCCCTTCCEEE
T ss_pred             cCCCEEEEECch-HHHHHHHHHHHHCC--CEEEEECCHHHHHHHHHHHhhhccccc-ceeEEEeeH---HHhhCCCCEEE
Confidence            467899999995 99999999999999  67777776544333321 100000000 112344432   34567899999


Q ss_pred             EecccCC
Q 023689           86 HVASPCT   92 (278)
Q Consensus        86 ~~a~~~~   92 (278)
                      ++++...
T Consensus       199 n~ag~~~  205 (287)
T 1nvt_A          199 NATPIGM  205 (287)
T ss_dssp             ECSCTTC
T ss_pred             ECCCCCC
Confidence            9998654

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=97.48  E-value=5.6e-05  Score=61.55  Aligned_cols=65  Identities=17%  Similarity=0.261  Sum_probs=47.7

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEec
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a   88 (278)
                      ||+|.|+|+||.+|+.+++.|.+.|+ +|++.+|+++..+.+...      ++     +..+   ..++++++|+||-+.
T Consensus        11 mm~I~iIG~tG~mG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~------g~-----~~~~---~~~~~~~aDvVi~av   75 (286)
T 3c24_A           11 PKTVAILGAGGKMGARITRKIHDSAH-HLAAIEIAPEGRDRLQGM------GI-----PLTD---GDGWIDEADVVVLAL   75 (286)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHSSS-EEEEECCSHHHHHHHHHT------TC-----CCCC---SSGGGGTCSEEEECS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHhc------CC-----CcCC---HHHHhcCCCEEEEcC
Confidence            57999999999999999999999998 898888876544443321      21     1222   334677899999764

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=97.48  E-value=0.0004  Score=57.31  Aligned_cols=113  Identities=16%  Similarity=0.103  Sum_probs=73.2

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccc-ccCCCC---CCCceEEEEccCCChhhHHHHhcCccEE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL-FALPGA---GDANLRVFEADVLDSGAVSRAVEGCKGV   84 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~-~~~~~~---~~~~v~~~~~Dl~d~~~~~~~~~~~d~v   84 (278)
                      ++||.|+|+ |.+|..++..|...|..+|.+.+++++..+.. ..+...   .....++...  .|    .++++++|+|
T Consensus         5 ~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t--~d----~~a~~~aDvV   77 (321)
T 3p7m_A            5 RKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGT--ND----YKDLENSDVV   77 (321)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SC----GGGGTTCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEc--CC----HHHHCCCCEE
Confidence            479999996 99999999999988753677787776543211 011000   0001111110  12    2578899999


Q ss_pred             EEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCC-EEEEec
Q 023689           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTS  130 (278)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~-~~v~~S  130 (278)
                      |..|+......  ......+..|+.....+.+.+.++... .++.+|
T Consensus        78 Ii~ag~p~k~G--~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt  122 (321)
T 3p7m_A           78 IVTAGVPRKPG--MSRDDLLGINIKVMQTVGEGIKHNCPNAFVICIT  122 (321)
T ss_dssp             EECCSCCCCTT--CCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             EEcCCcCCCCC--CCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEec
Confidence            99998644322  345678899999999999999888644 344443

>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*

Probab=97.47  E-value=0.00026  Score=59.35  Aligned_cols=36  Identities=22%  Similarity=0.318  Sum_probs=28.4

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCC
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG   44 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   44 (278)
                      +++|.|.||||++|+.|++.|.++...++..+..+.
T Consensus         7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~   42 (359)
T 4dpl_A            7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKG   42 (359)
T ss_dssp             CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEEST
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECch
Confidence            468999999999999999988877654666665433

>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*

Probab=97.47  E-value=0.00026  Score=59.35  Aligned_cols=36  Identities=22%  Similarity=0.318  Sum_probs=28.4

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCC
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG   44 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   44 (278)
                      +++|.|.||||++|+.|++.|.++...++..+..+.
T Consensus         7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~   42 (359)
T 4dpk_A            7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKG   42 (359)
T ss_dssp             CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEEST
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECch
Confidence            468999999999999999988877654666665433

>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*

Probab=97.44  E-value=0.00053  Score=57.03  Aligned_cols=94  Identities=17%  Similarity=0.146  Sum_probs=56.3

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCC--CCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNN--YTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g--~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      |+||.|.||||++|+.+++.|.+++  ..+++++.........+. +.+  . .+.+...|   ++    .++++|+||-
T Consensus         3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~~~-~~~--~-~i~~~~~~---~~----~~~~vDvVf~   71 (336)
T 2r00_A            3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKTYR-FNG--K-TVRVQNVE---EF----DWSQVHIALF   71 (336)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCEEE-ETT--E-EEEEEEGG---GC----CGGGCSEEEE
T ss_pred             ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCcee-ecC--c-eeEEecCC---hH----HhcCCCEEEE
Confidence            5799999999999999999999873  225666553222111111 111  0 23332222   22    2468999998


Q ss_pred             ecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecce
Q 023689           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSI  132 (278)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~  132 (278)
                      +.+..                  .+......+.+.|. ++|-.|+.
T Consensus        72 a~g~~------------------~s~~~a~~~~~~G~-~vId~s~~   98 (336)
T 2r00_A           72 SAGGE------------------LSAKWAPIAAEAGV-VVIDNTSH   98 (336)
T ss_dssp             CSCHH------------------HHHHHHHHHHHTTC-EEEECSST
T ss_pred             CCCch------------------HHHHHHHHHHHcCC-EEEEcCCc
Confidence            76431                  13456666667775 67777764

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=97.44  E-value=0.00013  Score=60.17  Aligned_cols=167  Identities=10%  Similarity=0.120  Sum_probs=90.6

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCC-CeEEEEecCCCCCcc----cccCCCCCCCceEEEEccCCChhhHHHHhcCccEE
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSH----LFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~----~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~v   84 (278)
                      +||.|+|| |.+|..++..|...+. .++.+++.+.++.+.    +........ .+++.. |  +    .++++++|+|
T Consensus         6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~-~~~v~~-~--~----~~a~~~aDvV   76 (318)
T 1ez4_A            6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTA-PKKIYS-G--E----YSDCKDADLV   76 (318)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSC-CCEEEE-C--C----GGGGTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcC-CeEEEE-C--C----HHHhCCCCEE
Confidence            69999999 9999999999988764 468888775433221    000000001 333332 1  2    3458999999


Q ss_pred             EEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchh
Q 023689           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWY  164 (278)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y  164 (278)
                      |..++......  ......+..|+.....+.+.+++++...++.+-|      +|-.   .+++-..  .....++....
T Consensus        77 ii~ag~~~~~g--~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t------NPv~---~~t~~~~--k~s~~p~~rvi  143 (318)
T 1ez4_A           77 VITAGAPQKPG--ESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA------NPVD---ILTYATW--KFSGFPKERVI  143 (318)
T ss_dssp             EECCCC------------CHHHHHHHHHHHHHHHHHTTCCSEEEECS------SSHH---HHHHHHH--HHHCCCGGGEE
T ss_pred             EECCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeC------CcHH---HHHHHHH--HHcCCCHHHEE
Confidence            99998654322  2345678999999999999998886443333333      1110   0000000  00000111223


Q ss_pred             hh-HHHHHHHHHHHHHHhcCCceEEEecceeeCCCC
Q 023689          165 PV-SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLM  199 (278)
Q Consensus       165 ~~-sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~  199 (278)
                      |. +....-++....++..|++...++ +.++|++.
T Consensus       144 G~gt~LD~~R~~~~la~~lgv~~~~v~-~~v~G~HG  178 (318)
T 1ez4_A          144 GSGTSLDSSRLRVALGKQFNVDPRSVD-AYIMGEHG  178 (318)
T ss_dssp             ECTTHHHHHHHHHHHHHHHTCCGGGEE-CCEESSSS
T ss_pred             eccccchHHHHHHHHHHHhCcChhHEE-EEEecccC
Confidence            44 333334444444556688777777 78888753

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.42  E-value=9e-05  Score=62.79  Aligned_cols=77  Identities=16%  Similarity=0.024  Sum_probs=56.5

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      ...+++|+|+|+ |.||+.+++.+...|+ +|++.+++++..+.+....+.   .+.   .+..+.+++.+.++++|+||
T Consensus       165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga-~V~~~d~~~~~l~~~~~~~g~---~~~---~~~~~~~~l~~~l~~aDvVi  236 (377)
T 2vhw_A          165 GVEPADVVVIGA-GTAGYNAARIANGMGA-TVTVLDINIDKLRQLDAEFCG---RIH---TRYSSAYELEGAVKRADLVI  236 (377)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTT---SSE---EEECCHHHHHHHHHHCSEEE
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhcCC---eeE---eccCCHHHHHHHHcCCCEEE
Confidence            456789999998 9999999999999999 899998876554333321110   221   23345667888888999999


Q ss_pred             Eeccc
Q 023689           86 HVASP   90 (278)
Q Consensus        86 ~~a~~   90 (278)
                      .+++.
T Consensus       237 ~~~~~  241 (377)
T 2vhw_A          237 GAVLV  241 (377)
T ss_dssp             ECCCC
T ss_pred             ECCCc
Confidence            98764

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=97.41  E-value=8.5e-05  Score=61.95  Aligned_cols=69  Identities=12%  Similarity=0.074  Sum_probs=56.9

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHH-hcCccEEEEec
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFHVA   88 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~-~~~~d~vi~~a   88 (278)
                      ++++|.|+ |.+|+.+++.|.++|+  |++++++++..+ +...      ++.++.+|.+|++.+.++ ++++|.|+-+.
T Consensus       116 ~~viI~G~-G~~g~~l~~~L~~~g~--v~vid~~~~~~~-~~~~------~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~  185 (336)
T 1lnq_A          116 RHVVICGW-SESTLECLRELRGSEV--FVLAEDENVRKK-VLRS------GANFVHGDPTRVSDLEKANVRGARAVIVDL  185 (336)
T ss_dssp             CEEEEESC-CHHHHHHHTTGGGSCE--EEEESCGGGHHH-HHHT------TCEEEESCTTSHHHHHHTCSTTEEEEEECC
T ss_pred             CCEEEECC-cHHHHHHHHHHHhCCc--EEEEeCChhhhh-HHhC------CcEEEEeCCCCHHHHHhcChhhccEEEEcC
Confidence            47999997 9999999999999887  777777766554 4332      788999999999999988 88999998653

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=97.39  E-value=0.00031  Score=58.94  Aligned_cols=174  Identities=16%  Similarity=0.087  Sum_probs=94.0

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCC-Ce---EEEEecCCCCC-ccc----ccCCCCCCCceEEEEccCCChhhHHHHhc
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNY-TS---INATVFPGSDS-SHL----FALPGAGDANLRVFEADVLDSGAVSRAVE   79 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~-~~---v~~~~r~~~~~-~~~----~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~   79 (278)
                      .+||.||||+|.||.+++-.|...+. .+   +.+...+.+.. +.+    ..+......-..-+  .+.+  .-.+.++
T Consensus        32 ~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v--~i~~--~~y~~~~  107 (375)
T 7mdh_A           32 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREV--SIGI--DPYEVFE  107 (375)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEE--EEES--CHHHHTT
T ss_pred             CCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCc--EEec--CCHHHhC
Confidence            46899999999999999999988764 12   44433322211 000    00100000011111  1121  2366789


Q ss_pred             CccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhc-CCC-EEEEecceeeeecCCCCCCccccCCCCCchhhh
Q 023689           80 GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-GVR-RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYC  157 (278)
Q Consensus        80 ~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~-~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~  157 (278)
                      ++|+||-.||...-.  .......++.|+.....+.+.+.++ +.. .++.+|- -. .....   ...+......+   
T Consensus       108 daDvVVitag~prkp--G~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsN-Pv-D~~t~---ia~k~sg~~~~---  177 (375)
T 7mdh_A          108 DVDWALLIGAKPRGP--GMERAALLDINGQIFADQGKALNAVASKNVKVLVVGN-PC-NTNAL---ICLKNAPDIPA---  177 (375)
T ss_dssp             TCSEEEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS-SH-HHHHH---HHHHTCTTSCG---
T ss_pred             CCCEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecC-ch-hHHHH---HHHHHcCCCCc---
Confidence            999999998864432  2456889999999999999999875 433 4444442 10 00000   00000000000   


Q ss_pred             hccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCC
Q 023689          158 KSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLM  199 (278)
Q Consensus       158 ~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~  199 (278)
                         ...-+-+....-++....+++.|++...++-..|.|++.
T Consensus       178 ---rvig~gT~LDsaR~r~~lA~~lgv~~~~V~~v~V~GeHg  216 (375)
T 7mdh_A          178 ---KNFHALTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHS  216 (375)
T ss_dssp             ---GGEEECCHHHHHHHHHHHHHHTTSCGGGEECCEEEBCSS
T ss_pred             ---cEEEeeehHHHHHHHHHHHHHhCcChhhcccceEEecCC
Confidence               112223444444455555567788777777557788764

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.39  E-value=9.5e-05  Score=61.85  Aligned_cols=71  Identities=21%  Similarity=0.245  Sum_probs=49.4

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChh---hHHHHhc--Ccc
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSG---AVSRAVE--GCK   82 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~---~~~~~~~--~~d   82 (278)
                      .+++|||+||+|.||...++.+...|+ +|+++ +++++.+.++.+      +...  .| .+.+   .+.+...  ++|
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga-~Vi~~-~~~~~~~~~~~l------Ga~~--i~-~~~~~~~~~~~~~~~~g~D  218 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGA-RVFAT-ARGSDLEYVRDL------GATP--ID-ASREPEDYAAEHTAGQGFD  218 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEE-ECHHHHHHHHHH------TSEE--EE-TTSCHHHHHHHHHTTSCEE
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEE-eCHHHHHHHHHc------CCCE--ec-cCCCHHHHHHHHhcCCCce
Confidence            467999999999999999999999999 88888 655544444433      3333  33 3322   2333333  689


Q ss_pred             EEEEecc
Q 023689           83 GVFHVAS   89 (278)
Q Consensus        83 ~vi~~a~   89 (278)
                      +||+++|
T Consensus       219 ~vid~~g  225 (343)
T 3gaz_A          219 LVYDTLG  225 (343)
T ss_dssp             EEEESSC
T ss_pred             EEEECCC
Confidence            9999976

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=97.37  E-value=0.00011  Score=54.18  Aligned_cols=71  Identities=14%  Similarity=0.138  Sum_probs=47.9

Q ss_pred             chhhHHHHHHHHHHCCCCeEEEEecCCCCCcc----cccCCCCCCCceEEEEccCCCh--hhHHHHhc------CccEEE
Q 023689           18 NGFIGTWLVKTLLDNNYTSINATVFPGSDSSH----LFALPGAGDANLRVFEADVLDS--GAVSRAVE------GCKGVF   85 (278)
Q Consensus        18 tG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~----~~~~~~~~~~~v~~~~~Dl~d~--~~~~~~~~------~~d~vi   85 (278)
                      +|.++...++.|.+.|+ .|++..|+......    .......+ .++..+.+|++++  +++.++++      +-|++|
T Consensus        25 s~~p~~a~a~~La~~Ga-~vvi~~r~~~e~~~~~~~~~~~~~~G-~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~dVLV  102 (157)
T 3gxh_A           25 SGLPNEQQFSLLKQAGV-DVVINLMPDSSKDAHPDEGKLVTQAG-MDYVYIPVDWQNPKVEDVEAFFAAMDQHKGKDVLV  102 (157)
T ss_dssp             EBCCCHHHHHHHHHTTC-CEEEECSCTTSTTSCTTHHHHHHHTT-CEEEECCCCTTSCCHHHHHHHHHHHHHTTTSCEEE
T ss_pred             cCCCCHHHHHHHHHcCC-CEEEECCCcccccccccHHHHHHHcC-CeEEEecCCCCCCCHHHHHHHHHHHHhcCCCCEEE
Confidence            36789999999999999 66665554433221    11111111 1677888999999  88877764      229999


Q ss_pred             Eeccc
Q 023689           86 HVASP   90 (278)
Q Consensus        86 ~~a~~   90 (278)
                      ||||.
T Consensus       103 nnAgg  107 (157)
T 3gxh_A          103 HCLAN  107 (157)
T ss_dssp             ECSBS
T ss_pred             ECCCC
Confidence            99986

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.35  E-value=0.00012  Score=61.00  Aligned_cols=74  Identities=16%  Similarity=0.115  Sum_probs=52.4

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChh---hHHHHhcCccEE
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSG---AVSRAVEGCKGV   84 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~---~~~~~~~~~d~v   84 (278)
                      .+++|||+|+ |.+|..+++.+...|+ .|+++++++++.+..+.+      +... ..|..+.+   .+.+...++|+|
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~l------Ga~~-~~d~~~~~~~~~~~~~~~~~d~v  234 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKEL------GADL-VVNPLKEDAAKFMKEKVGGVHAA  234 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHT------TCSE-EECTTTSCHHHHHHHHHSSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHC------CCCE-EecCCCccHHHHHHHHhCCCCEE
Confidence            4679999999 7799999999999999 899998877655554443      2211 14555433   333333579999


Q ss_pred             EEeccc
Q 023689           85 FHVASP   90 (278)
Q Consensus        85 i~~a~~   90 (278)
                      |++++.
T Consensus       235 id~~g~  240 (339)
T 1rjw_A          235 VVTAVS  240 (339)
T ss_dssp             EESSCC
T ss_pred             EECCCC
Confidence            999764

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=97.32  E-value=0.00025  Score=58.41  Aligned_cols=68  Identities=18%  Similarity=0.231  Sum_probs=49.5

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      ..+||+|.|+|. |.+|..+++.|.+.|+ .|++.+|+++..+.+...      ++..       .++..++++++|+||
T Consensus        18 ~~~m~~I~iIG~-G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~l~~~------g~~~-------~~~~~~~~~~aDvvi   82 (310)
T 3doj_A           18 GSHMMEVGFLGL-GIMGKAMSMNLLKNGF-KVTVWNRTLSKCDELVEH------GASV-------CESPAEVIKKCKYTI   82 (310)
T ss_dssp             CCCSCEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSSGGGGHHHHHT------TCEE-------CSSHHHHHHHCSEEE
T ss_pred             cccCCEEEEECc-cHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHC------CCeE-------cCCHHHHHHhCCEEE
Confidence            456789999986 9999999999999999 999999987765554332      2211       234556666777777


Q ss_pred             Eec
Q 023689           86 HVA   88 (278)
Q Consensus        86 ~~a   88 (278)
                      -+.
T Consensus        83 ~~v   85 (310)
T 3doj_A           83 AML   85 (310)
T ss_dssp             ECC
T ss_pred             EEc
Confidence            654

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.31  E-value=0.00033  Score=59.26  Aligned_cols=74  Identities=14%  Similarity=0.126  Sum_probs=49.7

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHh--cCccEEE
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAV--EGCKGVF   85 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~--~~~d~vi   85 (278)
                      .+.+|||+||+|.||...++.+...|+ .|+++.+ +++.+.++.+      +...+ .|..+.+..+++.  .++|+||
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga-~Vi~~~~-~~~~~~~~~l------Ga~~v-~~~~~~~~~~~~~~~~g~D~vi  253 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDA-HVTAVCS-QDASELVRKL------GADDV-IDYKSGSVEEQLKSLKPFDFIL  253 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC-GGGHHHHHHT------TCSEE-EETTSSCHHHHHHTSCCBSEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEeC-hHHHHHHHHc------CCCEE-EECCchHHHHHHhhcCCCCEEE
Confidence            467999999999999999999999999 7888774 3343333333      22111 2444433333332  4799999


Q ss_pred             Eeccc
Q 023689           86 HVASP   90 (278)
Q Consensus        86 ~~a~~   90 (278)
                      +++|.
T Consensus       254 d~~g~  258 (375)
T 2vn8_A          254 DNVGG  258 (375)
T ss_dssp             ESSCT
T ss_pred             ECCCC
Confidence            99874

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=97.28  E-value=0.00036  Score=57.67  Aligned_cols=169  Identities=9%  Similarity=0.051  Sum_probs=93.5

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCC-----CCCCceEEEEccCCChhhHHHHhcCcc
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPG-----AGDANLRVFEADVLDSGAVSRAVEGCK   82 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~-----~~~~~v~~~~~Dl~d~~~~~~~~~~~d   82 (278)
                      ++||.|+|| |.+|..++..|...|+.+|.+.+++++..+... .+..     ....+++..       .++ ++++++|
T Consensus         4 ~~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t-------~d~-~al~~aD   74 (322)
T 1t2d_A            4 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGS-------NTY-DDLAGAD   74 (322)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEE-------CCG-GGGTTCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEEC-------CCH-HHhCCCC
Confidence            468999998 999999999999998734888887765332110 0000     000022211       223 5689999


Q ss_pred             EEEEecccCCCCCCC---CchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhh-h
Q 023689           83 GVFHVASPCTLEDPV---DPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYC-K  158 (278)
Q Consensus        83 ~vi~~a~~~~~~~~~---~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~-~  158 (278)
                      +||.+++........   .........|+.....+.+.+.+.....++.+-|.      |..   ..++-.   .... .
T Consensus        75 ~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN------P~~---~~t~~~---~~~~g~  142 (322)
T 1t2d_A           75 VVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTN------PVD---VMVQLL---HQHSGV  142 (322)
T ss_dssp             EEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS------SHH---HHHHHH---HHHHCC
T ss_pred             EEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC------ChH---HHHHHH---HHhcCC
Confidence            999998754321110   11456678888888888888887754434333331      110   000000   0000 0


Q ss_pred             ccCchhhh-HHHHHHHHHHHHHHhcCCceEEEecceeeCCCC
Q 023689          159 SRKKWYPV-SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLM  199 (278)
Q Consensus       159 ~~~~~y~~-sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~  199 (278)
                      ++....|. +-...-++....++..|++..-++. .++|+..
T Consensus       143 ~~~rviG~gt~ld~~R~~~~la~~lgv~~~~v~~-~v~G~HG  183 (322)
T 1t2d_A          143 PKNKIIGLGGVLDTSRLKYYISQKLNVCPRDVNA-HIVGAHG  183 (322)
T ss_dssp             CGGGEEECCHHHHHHHHHHHHHHHHTSCGGGEEC-CEEBCSS
T ss_pred             ChHHEEeccCcccHHHHHHHHHHHhCCCHHHeEE-EEEcCCC
Confidence            11223444 4444444455555566887777764 4888754

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=97.28  E-value=0.00015  Score=59.97  Aligned_cols=69  Identities=14%  Similarity=0.178  Sum_probs=49.4

Q ss_pred             cccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEE
Q 023689            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (278)
Q Consensus         5 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~v   84 (278)
                      +...+|+|.|+|. |.+|..+++.|.+.|+ +|++.+|+++..+.+...      ++.       -..++.++++++|+|
T Consensus        27 ~~~~~~~I~iIG~-G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~l~~~------g~~-------~~~~~~e~~~~aDvV   91 (320)
T 4dll_A           27 SDPYARKITFLGT-GSMGLPMARRLCEAGY-ALQVWNRTPARAASLAAL------GAT-------IHEQARAAARDADIV   91 (320)
T ss_dssp             --CCCSEEEEECC-TTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTT------TCE-------EESSHHHHHTTCSEE
T ss_pred             cccCCCEEEEECc-cHHHHHHHHHHHhCCC-eEEEEcCCHHHHHHHHHC------CCE-------eeCCHHHHHhcCCEE
Confidence            3445689999977 9999999999999999 899998877654444322      221       123466777888888


Q ss_pred             EEec
Q 023689           85 FHVA   88 (278)
Q Consensus        85 i~~a   88 (278)
                      |-+.
T Consensus        92 i~~v   95 (320)
T 4dll_A           92 VSML   95 (320)
T ss_dssp             EECC
T ss_pred             EEEC
Confidence            8664

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.28  E-value=0.00024  Score=59.53  Aligned_cols=74  Identities=9%  Similarity=0.093  Sum_probs=52.1

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChh---hHHHHh--cCccE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSG---AVSRAV--EGCKG   83 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~---~~~~~~--~~~d~   83 (278)
                      ++++||+||+|.||...++.+...|+ +|+++.+++++.+.++.+..    . ..  .|..+.+   .+.+..  .++|+
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~~Ga----~-~~--~~~~~~~~~~~v~~~~~~~g~D~  236 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGF-RPIVTVRRDEQIALLKDIGA----A-HV--LNEKAPDFEATLREVMKAEQPRI  236 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESCGGGHHHHHHHTC----S-EE--EETTSTTHHHHHHHHHHHHCCCE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCC----C-EE--EECCcHHHHHHHHHHhcCCCCcE
Confidence            37999999999999999999999999 89999987766555544311    1 12  2343333   233333  27999


Q ss_pred             EEEeccc
Q 023689           84 VFHVASP   90 (278)
Q Consensus        84 vi~~a~~   90 (278)
                      ||+++|.
T Consensus       237 vid~~g~  243 (349)
T 3pi7_A          237 FLDAVTG  243 (349)
T ss_dssp             EEESSCH
T ss_pred             EEECCCC
Confidence            9999864

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=97.26  E-value=0.0017  Score=51.37  Aligned_cols=71  Identities=25%  Similarity=0.292  Sum_probs=46.0

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHC-CCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc-----CccE
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----GCKG   83 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~-g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----~~d~   83 (278)
                      |||.|+|++|.+|+.+++.+.+. ++ ++++......+.+.+...      ... +..|.+.++.+.+.++     ++++
T Consensus         1 mkV~V~Ga~G~mG~~i~~~~~~~~~~-elva~~d~~~dl~~~~~~------~~D-vvIDfT~p~a~~~~~~~a~~~g~~~   72 (245)
T 1p9l_A            1 MRVGVLGAKGKVGTTMVRAVAAADDL-TLSAELDAGDPLSLLTDG------NTE-VVIDFTHPDVVMGNLEFLIDNGIHA   72 (245)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHCTTC-EEEEEECTTCCTHHHHHT------TCC-EEEECSCTTTHHHHHHHHHHTTCEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCC-EEEEEEccCCCHHHHhcc------CCc-EEEEccChHHHHHHHHHHHHcCCCE
Confidence            48999999999999999999876 77 776665443322222110      111 4477788776665543     5677


Q ss_pred             EEEec
Q 023689           84 VFHVA   88 (278)
Q Consensus        84 vi~~a   88 (278)
                      |+-..
T Consensus        73 VigTT   77 (245)
T 1p9l_A           73 VVGTT   77 (245)
T ss_dssp             EECCC
T ss_pred             EEcCC
Confidence            76543

>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A

Probab=97.26  E-value=0.0015  Score=54.83  Aligned_cols=93  Identities=26%  Similarity=0.290  Sum_probs=54.3

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCC--CeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEe
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNY--TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~--~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~   87 (278)
                      ++|.|.||||++|+.|++.|.++++  .++..+..+......+. +.+  . .+.+...|   ++    .++++|+||.+
T Consensus         3 ~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~~~~-~~~--~-~~~~~~~~---~~----~~~~~Dvvf~a   71 (366)
T 3pwk_A            3 YTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLK-FKD--Q-DITIEETT---ET----AFEGVDIALFS   71 (366)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTCEEE-ETT--E-EEEEEECC---TT----TTTTCSEEEEC
T ss_pred             cEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCCcce-ecC--C-CceEeeCC---HH----HhcCCCEEEEC
Confidence            6899999999999999998888754  23444433222222221 111  0 22222222   11    25789999988


Q ss_pred             cccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecce
Q 023689           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSI  132 (278)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~  132 (278)
                      .+...                  .......+.+.|. ++|-.|+.
T Consensus        72 ~~~~~------------------s~~~a~~~~~~G~-~vIDlSa~   97 (366)
T 3pwk_A           72 AGSST------------------SAKYAPYAVKAGV-VVVDNTSY   97 (366)
T ss_dssp             SCHHH------------------HHHHHHHHHHTTC-EEEECSST
T ss_pred             CChHh------------------HHHHHHHHHHCCC-EEEEcCCc
Confidence            64311                  3345555666775 57777764

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=97.25  E-value=0.00078  Score=55.40  Aligned_cols=110  Identities=13%  Similarity=0.029  Sum_probs=70.0

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHC--CCCeEEEEecCCCCCcccc-cCCCC----CCCceEEEEccCCChhhHHHHhcCcc
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDN--NYTSINATVFPGSDSSHLF-ALPGA----GDANLRVFEADVLDSGAVSRAVEGCK   82 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~--g~~~v~~~~r~~~~~~~~~-~~~~~----~~~~v~~~~~Dl~d~~~~~~~~~~~d   82 (278)
                      |||.|+|+ |.+|..++..|.+.  |+ +|++.+++++..+... .+...    .. ...+..  -+|   ..+ ++++|
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~~~g~-~V~l~D~~~~~~~~~~~~l~~~~~~~~~-~~~i~~--t~d---~~~-l~~aD   71 (310)
T 1guz_A            1 MKITVIGA-GNVGATTAFRLAEKQLAR-ELVLLDVVEGIPQGKALDMYESGPVGLF-DTKVTG--SND---YAD-TANSD   71 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCS-EEEEECSSSSHHHHHHHHHHTTHHHHTC-CCEEEE--ESC---GGG-GTTCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCC-EEEEEeCChhHHHHHHHhHHhhhhcccC-CcEEEE--CCC---HHH-HCCCC
Confidence            48999998 99999999999885  66 8999999775433221 00000    00 111111  022   233 78999


Q ss_pred             EEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCC-EEEEec
Q 023689           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTS  130 (278)
Q Consensus        83 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~-~~v~~S  130 (278)
                      +||-+++.....  .......+..|+.....+.+.+++.... .++.+|
T Consensus        72 vViiav~~p~~~--g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~t  118 (310)
T 1guz_A           72 IVIITAGLPRKP--GMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVS  118 (310)
T ss_dssp             EEEECCSCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECC
T ss_pred             EEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEc
Confidence            999998753321  1235677888999999999988877533 344443

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=97.25  E-value=0.00055  Score=58.81  Aligned_cols=71  Identities=15%  Similarity=0.113  Sum_probs=53.9

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      -+.+|+|+|.|+ |.+|+.+++.+.+.|+ +|++++.++... .. .+      .-.++..|..|.+.+.++++++|+|+
T Consensus        32 ~~~~~~IlIlG~-G~lg~~~~~aa~~lG~-~v~v~d~~~~~p-~~-~~------ad~~~~~~~~d~~~l~~~a~~~D~V~  101 (419)
T 4e4t_A           32 ILPGAWLGMVGG-GQLGRMFCFAAQSMGY-RVAVLDPDPASP-AG-AV------ADRHLRAAYDDEAALAELAGLCEAVS  101 (419)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSCTTCH-HH-HH------SSEEECCCTTCHHHHHHHHHHCSEEE
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCC-EEEEECCCCcCc-hh-hh------CCEEEECCcCCHHHHHHHHhcCCEEE
Confidence            345689999987 8999999999999999 787776543321 11 11      22456689999999999999999988


Q ss_pred             E
Q 023689           86 H   86 (278)
Q Consensus        86 ~   86 (278)
                      .
T Consensus       102 ~  102 (419)
T 4e4t_A          102 T  102 (419)
T ss_dssp             E
T ss_pred             E
Confidence            3

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=97.24  E-value=0.0025  Score=50.62  Aligned_cols=106  Identities=15%  Similarity=0.103  Sum_probs=65.4

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCC-------C-------------C-CCCceEEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP-------G-------------A-GDANLRVF   64 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~-------~-------------~-~~~~v~~~   64 (278)
                      .++.++|+|.|+ |++|+++++.|...|...+.+.+++.-....+....       +             . ...+++.+
T Consensus        25 ~l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~  103 (251)
T 1zud_1           25 KLLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTAL  103 (251)
T ss_dssp             HHHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEE
Confidence            445679999998 779999999999999877877766443222221110       0             0 01134455


Q ss_pred             EccCCChhhHHHHhcCccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           65 EADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        65 ~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      ..+++ .+.+.+.++++|+||.+..         ...        .-..+.++|.+.+. .+|+.+.
T Consensus       104 ~~~~~-~~~~~~~~~~~DvVi~~~d---------~~~--------~r~~l~~~~~~~~~-p~i~~~~  151 (251)
T 1zud_1          104 QQRLT-GEALKDAVARADVVLDCTD---------NMA--------TRQEINAACVALNT-PLITASA  151 (251)
T ss_dssp             CSCCC-HHHHHHHHHHCSEEEECCS---------SHH--------HHHHHHHHHHHTTC-CEEEEEE
T ss_pred             eccCC-HHHHHHHHhcCCEEEECCC---------CHH--------HHHHHHHHHHHhCC-CEEEEec
Confidence            55553 3567788889999998731         111        12345567777764 4676553

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=97.23  E-value=0.0003  Score=59.11  Aligned_cols=75  Identities=12%  Similarity=0.076  Sum_probs=56.3

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccC------------------C
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADV------------------L   69 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl------------------~   69 (278)
                      .+++|+|+|+ |-+|...++.+...|. +|++.++++...+.+..+      +.+++..|+                  .
T Consensus       183 ~~~kV~ViG~-G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~l------Ga~~~~l~~~~~~~~gya~~~~~~~~~~  254 (381)
T 3p2y_A          183 KPASALVLGV-GVAGLQALATAKRLGA-KTTGYDVRPEVAEQVRSV------GAQWLDLGIDAAGEGGYARELSEAERAQ  254 (381)
T ss_dssp             CCCEEEEESC-SHHHHHHHHHHHHHTC-EEEEECSSGGGHHHHHHT------TCEECCCC-------------CHHHHHH
T ss_pred             CCCEEEEECc-hHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc------CCeEEeccccccccccchhhhhHHHHhh
Confidence            4679999999 9999999999999999 899999987765555443      344443321                  1


Q ss_pred             ChhhHHHHhcCccEEEEeccc
Q 023689           70 DSGAVSRAVEGCKGVFHVASP   90 (278)
Q Consensus        70 d~~~~~~~~~~~d~vi~~a~~   90 (278)
                      +.+.+.++++++|+||.++..
T Consensus       255 ~~~~l~e~l~~aDIVI~tv~i  275 (381)
T 3p2y_A          255 QQQALEDAITKFDIVITTALV  275 (381)
T ss_dssp             HHHHHHHHHTTCSEEEECCCC
T ss_pred             hHHHHHHHHhcCCEEEECCCC
Confidence            235678888999999988644

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=97.22  E-value=0.00048  Score=56.64  Aligned_cols=167  Identities=14%  Similarity=0.078  Sum_probs=94.9

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCC-CeEEEEecCCCCCcc-cccCCC---CCCCceEEEEccCCChhhHHHHhcCccEE
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSH-LFALPG---AGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~-~~~~~~---~~~~~v~~~~~Dl~d~~~~~~~~~~~d~v   84 (278)
                      |||.|+|+ |.+|..++..|...+. .++.+.+.+.++.+. ...+..   ... .+++.. +  +    .++++++|+|
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~-~~~v~~-~--~----~~a~~~aD~V   71 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAH-PVWVWA-G--S----YGDLEGARAV   71 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSC-CCEEEE-C--C----GGGGTTEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcC-CeEEEE-C--C----HHHhCCCCEE
Confidence            58999998 9999999999998872 478888876533221 111100   000 333332 2  2    3458999999


Q ss_pred             EEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchh
Q 023689           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWY  164 (278)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y  164 (278)
                      |..++......  ......+..|+.....+.+.+++++...++.+-|      +|-.   .+++-..  .....++....
T Consensus        72 ii~ag~~~~~g--~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t------NPv~---~~t~~~~--k~s~~p~~rvi  138 (310)
T 2xxj_A           72 VLAAGVAQRPG--ETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVAT------NPVD---VMTQVAY--ALSGLPPGRVV  138 (310)
T ss_dssp             EECCCCCCCTT--CCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS------SSHH---HHHHHHH--HHHTCCGGGEE
T ss_pred             EECCCCCCCCC--cCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEec------CchH---HHHHHHH--HHcCCCHHHEE
Confidence            99998654322  3456778999999999999998876444333333      1110   0000000  00000111233


Q ss_pred             hh-HHHHHHHHHHHHHHhcCCceEEEecceeeCCCC
Q 023689          165 PV-SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLM  199 (278)
Q Consensus       165 ~~-sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~  199 (278)
                      |. +....-++....++..|++...++. .+.|++.
T Consensus       139 G~gt~LD~~R~~~~la~~lgv~~~~v~~-~v~G~HG  173 (310)
T 2xxj_A          139 GSGTILDTARFRALLAEYLRVAPQSVHA-YVLGEHG  173 (310)
T ss_dssp             ECTTHHHHHHHHHHHHHHHTSCGGGEEE-EEEBCSS
T ss_pred             ecCcchhHHHHHHHHHHHhCcCHHHeEE-EEecccC
Confidence            44 3333344444445566787777776 7778763

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=97.20  E-value=0.00035  Score=55.67  Aligned_cols=70  Identities=21%  Similarity=0.230  Sum_probs=52.1

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      .++ +++|+|+ |..|+.++..|.+.|..+|++..|+.++.+.+..       .....     ..+++.+.++++|+||+
T Consensus       107 ~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~-------~~~~~-----~~~~~~~~~~~aDiVIn  172 (253)
T 3u62_A          107 VKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALDF-------PVKIF-----SLDQLDEVVKKAKSLFN  172 (253)
T ss_dssp             CCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCS-------SCEEE-----EGGGHHHHHHTCSEEEE
T ss_pred             CCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH-------HcccC-----CHHHHHhhhcCCCEEEE
Confidence            356 8999998 9999999999999998789889997765544432       22111     23456778889999999


Q ss_pred             eccc
Q 023689           87 VASP   90 (278)
Q Consensus        87 ~a~~   90 (278)
                      +...
T Consensus       173 atp~  176 (253)
T 3u62_A          173 TTSV  176 (253)
T ss_dssp             CSST
T ss_pred             CCCC
Confidence            8643

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=97.20  E-value=0.00052  Score=56.93  Aligned_cols=168  Identities=11%  Similarity=0.010  Sum_probs=93.1

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCC-----CCCCceEEEEccCCChhhHHHHhcCcc
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPG-----AGDANLRVFEADVLDSGAVSRAVEGCK   82 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~-----~~~~~v~~~~~Dl~d~~~~~~~~~~~d   82 (278)
                      .+||.|+|| |.+|..++..|...|+.+|++.+++++..+... .+..     ....++...    +   ++ ++++++|
T Consensus        14 ~~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t----~---d~-~al~~aD   84 (328)
T 2hjr_A           14 RKKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGE----N---NY-EYLQNSD   84 (328)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE----S---CG-GGGTTCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEEC----C---CH-HHHCCCC
Confidence            368999998 999999999999999735888888765443211 0000     000022211    1   23 5688999


Q ss_pred             EEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCc
Q 023689           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK  162 (278)
Q Consensus        83 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  162 (278)
                      +||-.++.......  ........|+.....+.+.+.+.....++.+-|.      |..   ..++-..  .....++..
T Consensus        85 ~VI~avg~p~k~g~--tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tN------P~~---~~t~~~~--~~~~~~~~r  151 (328)
T 2hjr_A           85 VVIITAGVPRKPNM--TRSDLLTVNAKIVGSVAENVGKYCPNAFVICITN------PLD---AMVYYFK--EKSGIPANK  151 (328)
T ss_dssp             EEEECCSCCCCTTC--CSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCS------SHH---HHHHHHH--HHHCCCGGG
T ss_pred             EEEEcCCCCCCCCC--chhhHHhhhHHHHHHHHHHHHHHCCCeEEEEecC------chH---HHHHHHH--HhcCCChhh
Confidence            99999875432211  2335677888888888888877654444333331      110   0000000  000001123


Q ss_pred             hhhh-HHHHHHHHHHHHHHhcCCceEEEecceeeCCCC
Q 023689          163 WYPV-SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLM  199 (278)
Q Consensus       163 ~y~~-sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~  199 (278)
                      ..|. +-...-++....++..|++..-+.. .++|++.
T Consensus       152 viG~~t~Ld~~R~~~~la~~lgv~~~~v~~-~v~G~Hg  188 (328)
T 2hjr_A          152 VCGMSGVLDSARFRCNLSRALGVKPSDVSA-IVVGGHG  188 (328)
T ss_dssp             EEESCHHHHHHHHHHHHHHHHTSCGGGEEC-CEEBCSS
T ss_pred             EEEeCcHHHHHHHHHHHHHHhCCCHHHeeE-EEecCCC
Confidence            3444 3444444444455566787777763 5888754

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.20  E-value=0.00011  Score=59.26  Aligned_cols=76  Identities=16%  Similarity=0.107  Sum_probs=49.1

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      +++|+++|+|+ |++|+.++..|.+.|+ +|++..|+.++.+.+........ .+..  .|+   +++.+  ..+|+||+
T Consensus       117 ~~~~~vlvlGa-Gg~g~a~a~~L~~~G~-~v~v~~R~~~~a~~l~~~~~~~~-~~~~--~~~---~~~~~--~~~DivIn  186 (272)
T 1p77_A          117 RPNQHVLILGA-GGATKGVLLPLLQAQQ-NIVLANRTFSKTKELAERFQPYG-NIQA--VSM---DSIPL--QTYDLVIN  186 (272)
T ss_dssp             CTTCEEEEECC-SHHHHTTHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGS-CEEE--EEG---GGCCC--SCCSEEEE
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHccccC-CeEE--eeH---HHhcc--CCCCEEEE
Confidence            45789999998 7899999999999997 99999998765444432100000 1211  222   21111  37999999


Q ss_pred             ecccCC
Q 023689           87 VASPCT   92 (278)
Q Consensus        87 ~a~~~~   92 (278)
                      +++...
T Consensus       187 ~t~~~~  192 (272)
T 1p77_A          187 ATSAGL  192 (272)
T ss_dssp             CCCC--
T ss_pred             CCCCCC
Confidence            987643

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=97.20  E-value=0.00061  Score=57.82  Aligned_cols=76  Identities=17%  Similarity=0.090  Sum_probs=53.7

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCC----------------
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVL----------------   69 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~----------------   69 (278)
                      ...+++|+|+|+ |.+|..+++.+...|. .|++.++++...+....+      +.+++..|..                
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga-~V~~~d~~~~~~~~~~~~------Ga~~~~i~~~~~~~~~~~~~~~~~~s  240 (384)
T 1l7d_A          169 TVPPARVLVFGV-GVAGLQAIATAKRLGA-VVMATDVRAATKEQVESL------GGKFITVDDEAMKTAETAGGYAKEMG  240 (384)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHHHT------TCEECCC-------------------
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc------CCeEEeecccccccccccccchhhcC
Confidence            346789999997 9999999999999999 799998887665444333      3333211221                


Q ss_pred             ------ChhhHHHHhcCccEEEEecc
Q 023689           70 ------DSGAVSRAVEGCKGVFHVAS   89 (278)
Q Consensus        70 ------d~~~~~~~~~~~d~vi~~a~   89 (278)
                            ..+.+.+.++++|+||+++.
T Consensus       241 ~~~~~~~~~~l~~~~~~aDvVi~~~~  266 (384)
T 1l7d_A          241 EEFRKKQAEAVLKELVKTDIAITTAL  266 (384)
T ss_dssp             ----CCHHHHHHHHHTTCSEEEECCC
T ss_pred             HHHHhhhHHHHHHHhCCCCEEEECCc
Confidence                  12337778889999998873

>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}

Probab=97.19  E-value=0.0017  Score=54.98  Aligned_cols=69  Identities=12%  Similarity=0.106  Sum_probs=52.4

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEe
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~   87 (278)
                      ||+|+|+|+ |..|+.+++.+.+.|+ +++.++.++.....  .+      .-..+..|..|.+.+.++++++|.|+..
T Consensus         1 M~~Ililg~-g~~g~~~~~a~~~~G~-~v~~~~~~~~~~~~--~~------~~~~~~~~~~d~~~l~~~~~~~d~v~~~   69 (380)
T 3ax6_A            1 MKKIGIIGG-GQLGKMMTLEAKKMGF-YVIVLDPTPRSPAG--QV------ADEQIVAGFFDSERIEDLVKGSDVTTYD   69 (380)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESSTTCTTG--GG------SSEEEECCTTCHHHHHHHHHTCSEEEES
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCC-EEEEEeCCCCCchh--hh------CceEEECCCCCHHHHHHHHhcCCEEEec
Confidence            579999998 7899999999999999 78777765432111  11      1235678999999999988999998753

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=97.19  E-value=0.00025  Score=59.70  Aligned_cols=74  Identities=11%  Similarity=0.045  Sum_probs=52.8

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCCh-hhHHHHhcCccEEEE
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS-GAVSRAVEGCKGVFH   86 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~-~~~~~~~~~~d~vi~   86 (278)
                      .+.+|||+|+ |.+|...++.+...|+ .|+++.+++++.+.++.+      +...+ .|..+. +..+++..++|+||.
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga-~Vi~~~~~~~~~~~~~~l------Ga~~v-~~~~~~~~~~~~~~~~~D~vid  249 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKM------GADHY-IATLEEGDWGEKYFDTFDLIVV  249 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHH------TCSEE-EEGGGTSCHHHHSCSCEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHc------CCCEE-EcCcCchHHHHHhhcCCCEEEE
Confidence            4679999999 9999999998888899 799999888776655543      22111 244443 333333358999999


Q ss_pred             eccc
Q 023689           87 VASP   90 (278)
Q Consensus        87 ~a~~   90 (278)
                      +++.
T Consensus       250 ~~g~  253 (360)
T 1piw_A          250 CASS  253 (360)
T ss_dssp             CCSC
T ss_pred             CCCC
Confidence            9875

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.19  E-value=0.00044  Score=56.46  Aligned_cols=71  Identities=8%  Similarity=0.141  Sum_probs=52.6

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      ++.+|+++|.|+ |.||+.+++.|...|+ +|++.+|+.+..+.....      ++..+     +.+++.++++++|+|+
T Consensus       152 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~------g~~~~-----~~~~l~~~l~~aDvVi  218 (293)
T 3d4o_A          152 TIHGANVAVLGL-GRVGMSVARKFAALGA-KVKVGARESDLLARIAEM------GMEPF-----HISKAAQELRDVDVCI  218 (293)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHT------TSEEE-----EGGGHHHHTTTCSEEE
T ss_pred             CCCCCEEEEEee-CHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHC------CCeec-----ChhhHHHHhcCCCEEE
Confidence            456899999996 9999999999999999 899998876443222222      33322     2346788889999999


Q ss_pred             Eecc
Q 023689           86 HVAS   89 (278)
Q Consensus        86 ~~a~   89 (278)
                      .+..
T Consensus       219 ~~~p  222 (293)
T 3d4o_A          219 NTIP  222 (293)
T ss_dssp             ECCS
T ss_pred             ECCC
Confidence            8863

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.18  E-value=0.00023  Score=57.34  Aligned_cols=74  Identities=15%  Similarity=0.037  Sum_probs=50.2

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      +++|+++|+|+ |++|+.++..|.+.|..+|++..|+.++.+.+...... . .+..+  ++.   ++..  .++|+||+
T Consensus       118 l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~-~-~~~~~--~~~---~l~~--~~~DivIn  187 (272)
T 3pwz_A          118 LRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH-S-RLRIS--RYE---ALEG--QSFDIVVN  187 (272)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC-T-TEEEE--CSG---GGTT--CCCSEEEE
T ss_pred             ccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc-C-CeeEe--eHH---Hhcc--cCCCEEEE
Confidence            46799999998 78999999999999965888888877655444321110 0 23333  222   2222  67999999


Q ss_pred             eccc
Q 023689           87 VASP   90 (278)
Q Consensus        87 ~a~~   90 (278)
                      +...
T Consensus       188 aTp~  191 (272)
T 3pwz_A          188 ATSA  191 (272)
T ss_dssp             CSSG
T ss_pred             CCCC
Confidence            8754

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=97.18  E-value=0.0011  Score=57.57  Aligned_cols=99  Identities=21%  Similarity=0.277  Sum_probs=72.2

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHH-hcCccEEEEe
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFHV   87 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~-~~~~d~vi~~   87 (278)
                      -++|+|.|| |-+|..+++.|. +++ .|..+.++++.++.+.....    +..++.+|-+|++-+.+. ++++|+++-+
T Consensus       235 ~~~v~I~Gg-G~ig~~lA~~L~-~~~-~v~iIE~d~~r~~~la~~l~----~~~Vi~GD~td~~~L~ee~i~~~D~~ia~  307 (461)
T 4g65_A          235 YRRIMIVGG-GNIGASLAKRLE-QTY-SVKLIERNLQRAEKLSEELE----NTIVFCGDAADQELLTEENIDQVDVFIAL  307 (461)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHT-TTS-EEEEEESCHHHHHHHHHHCT----TSEEEESCTTCHHHHHHTTGGGCSEEEEC
T ss_pred             ccEEEEEcc-hHHHHHHHHHhh-hcC-ceEEEecCHHHHHHHHHHCC----CceEEeccccchhhHhhcCchhhcEEEEc
Confidence            478999988 999999999874 567 88888887777666543221    678999999999988876 7889999865


Q ss_pred             cccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      .+        ++     ++|+..+    -.|++.|+++.|-.-.
T Consensus       308 T~--------~D-----e~Ni~~~----llAk~~gv~kvIa~vn  334 (461)
T 4g65_A          308 TN--------ED-----ETNIMSA----MLAKRMGAKKVMVLIQ  334 (461)
T ss_dssp             CS--------CH-----HHHHHHH----HHHHHTTCSEEEEECS
T ss_pred             cc--------Cc-----HHHHHHH----HHHHHcCCcccccccc
Confidence            21        12     3444444    3457788888776543

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.18  E-value=0.00045  Score=56.58  Aligned_cols=72  Identities=13%  Similarity=0.173  Sum_probs=53.4

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      ++.+|+++|.|+ |.+|+.+++.|...|+ +|++.+|+.+....+...      ++..+     +.+++.++++++|+|+
T Consensus       154 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~-~V~~~d~~~~~~~~~~~~------g~~~~-----~~~~l~~~l~~aDvVi  220 (300)
T 2rir_A          154 TIHGSQVAVLGL-GRTGMTIARTFAALGA-NVKVGARSSAHLARITEM------GLVPF-----HTDELKEHVKDIDICI  220 (300)
T ss_dssp             CSTTSEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHT------TCEEE-----EGGGHHHHSTTCSEEE
T ss_pred             CCCCCEEEEEcc-cHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHC------CCeEE-----chhhHHHHhhCCCEEE
Confidence            456899999997 9999999999999999 899998876443322221      22222     2346788889999999


Q ss_pred             Eeccc
Q 023689           86 HVASP   90 (278)
Q Consensus        86 ~~a~~   90 (278)
                      .+...
T Consensus       221 ~~~p~  225 (300)
T 2rir_A          221 NTIPS  225 (300)
T ss_dssp             ECCSS
T ss_pred             ECCCh
Confidence            88653

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.18  E-value=0.00022  Score=60.98  Aligned_cols=72  Identities=18%  Similarity=0.191  Sum_probs=52.6

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      +.+++|+|+|+ |.+|+.+++.|...|...|++..|+.++...+. .+      +..     ..+.+++.+.+.++|+||
T Consensus       165 l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~------g~~-----~~~~~~l~~~l~~aDvVi  232 (404)
T 1gpj_A          165 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL------GGE-----AVRFDELVDHLARSDVVV  232 (404)
T ss_dssp             CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH------TCE-----ECCGGGHHHHHHTCSEEE
T ss_pred             ccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc------CCc-----eecHHhHHHHhcCCCEEE
Confidence            56899999998 999999999999999867888888765432221 22      222     123345777788999999


Q ss_pred             Eeccc
Q 023689           86 HVASP   90 (278)
Q Consensus        86 ~~a~~   90 (278)
                      .+.+.
T Consensus       233 ~at~~  237 (404)
T 1gpj_A          233 SATAA  237 (404)
T ss_dssp             ECCSS
T ss_pred             EccCC
Confidence            98754

>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*

Probab=97.15  E-value=0.0022  Score=53.91  Aligned_cols=70  Identities=11%  Similarity=0.068  Sum_probs=50.1

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccC-CChhhHHHHhcCccEEEEe
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADV-LDSGAVSRAVEGCKGVFHV   87 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl-~d~~~~~~~~~~~d~vi~~   87 (278)
                      ||+|+|+|| |..|..++..+.+.|+ +|++++.+++....  .+      .-+++..|. .|.+.+....+++|+|+-.
T Consensus         1 MK~I~ilGg-g~~g~~~~~~Ak~~G~-~vv~vd~~~~~~~~--~~------aD~~~~~~~~~d~~~~~~~~~~~D~v~~~   70 (363)
T 4ffl_A            1 MKTICLVGG-KLQGFEAAYLSKKAGM-KVVLVDKNPQALIR--NY------ADEFYCFDVIKEPEKLLELSKRVDAVLPV   70 (363)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESCTTCTTT--TT------SSEEEECCTTTCHHHHHHHHTSSSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCC-EEEEEeCCCCChhH--hh------CCEEEECCCCcCHHHHHHHhcCCCEEEEC
Confidence            789999996 8999999999999999 88888765543211  11      113455565 4566777777899998754


Q ss_pred             c
Q 023689           88 A   88 (278)
Q Consensus        88 a   88 (278)
                      .
T Consensus        71 ~   71 (363)
T 4ffl_A           71 N   71 (363)
T ss_dssp             C
T ss_pred             C
Confidence            3

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=97.15  E-value=0.0032  Score=52.64  Aligned_cols=106  Identities=12%  Similarity=0.022  Sum_probs=68.8

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCC---------------------CCCCceEEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPG---------------------AGDANLRVF   64 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~---------------------~~~~~v~~~   64 (278)
                      +++.++|+|.|+ |++|+++++.|...|...+.+++++.-....+....-                     ....+++.+
T Consensus       115 ~L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~  193 (353)
T 3h5n_A          115 KLKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEI  193 (353)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEe
Confidence            445679999998 8899999999999998788888876543333322110                     011256677


Q ss_pred             EccCCChhhHHHHhcCccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEec
Q 023689           65 EADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS  130 (278)
Q Consensus        65 ~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~S  130 (278)
                      ..++.+...+.+ ++++|+||.+...         ...       .-..+-++|.+.++ .+|+.+
T Consensus       194 ~~~i~~~~~~~~-~~~~DlVvd~~Dn---------~~~-------~r~~ln~~c~~~~~-p~i~~~  241 (353)
T 3h5n_A          194 ALNINDYTDLHK-VPEADIWVVSADH---------PFN-------LINWVNKYCVRANQ-PYINAG  241 (353)
T ss_dssp             ECCCCSGGGGGG-SCCCSEEEECCCC---------STT-------HHHHHHHHHHHTTC-CEEEEE
T ss_pred             ecccCchhhhhH-hccCCEEEEecCC---------hHH-------HHHHHHHHHHHhCC-CEEEEE
Confidence            777776654666 8899999986411         110       12234567888875 466654

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=97.14  E-value=0.00019  Score=59.26  Aligned_cols=111  Identities=12%  Similarity=0.062  Sum_probs=74.0

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCC-CeEEEEecCCCCCcc----cc---cCCCCCCCceEEEEccCCChhhHHHHhc
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSH----LF---ALPGAGDANLRVFEADVLDSGAVSRAVE   79 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~----~~---~~~~~~~~~v~~~~~Dl~d~~~~~~~~~   79 (278)
                      ..+||.|+|+ |.+|..++..|...|. ++|.+.+.+.+..+-    +.   .+..    ...+...  .|++    .++
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~----~~~i~~t--~d~~----~~~   88 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLH----TAKIVSG--KDYS----VSA   88 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSC----CSEEEEE--SSSC----SCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhccc----CCeEEEc--CCHH----HhC
Confidence            4579999999 9999999999998885 578888775532211    00   1110    1122211  1222    278


Q ss_pred             CccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           80 GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        80 ~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      ++|+||-.||......  ....+.+..|+.....+.+.+.+++...++.+-|
T Consensus        89 daDiVIitaG~p~kpG--~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvt  138 (330)
T 3ldh_A           89 GSKLVVITAGARQQEG--ESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHP  138 (330)
T ss_dssp             SCSEEEECCSCCCCSS--CCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             CCCEEEEeCCCCCCCC--CCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCC
Confidence            9999999998754332  3457889999999999999998886444444433

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=97.14  E-value=0.00048  Score=56.49  Aligned_cols=165  Identities=14%  Similarity=0.091  Sum_probs=87.3

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCC-CeEEEEecCCCCCcc-cccCCCCC--CCceEEEEccCCChhhHHHHhcCccEEE
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSH-LFALPGAG--DANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~-~~~~~~~~--~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      |||.|+|+ |.+|..++..|...|+ .+|.+.+++++..+. ...+....  ....++..   .+.    ++++++|+||
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~~~----~a~~~aDvVI   72 (304)
T 2v6b_A            1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH---GGH----SELADAQVVI   72 (304)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE---ECG----GGGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE---CCH----HHhCCCCEEE
Confidence            58999998 9999999999999885 368888776542211 01110000  00222221   122    4688999999


Q ss_pred             EecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhh
Q 023689           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYP  165 (278)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~  165 (278)
                      .+++......  ......+..|+.....+++.+.+.....++.+.|...- ...    ..+.+.        .++....|
T Consensus        73 i~~~~~~~~g--~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~tNP~~-~~~----~~~~~~--------~~~~rviG  137 (304)
T 2v6b_A           73 LTAGANQKPG--ESRLDLLEKNADIFRELVPQITRAAPDAVLLVTSNPVD-LLT----DLATQL--------APGQPVIG  137 (304)
T ss_dssp             ECC--------------CHHHHHHHHHHHHHHHHHHCSSSEEEECSSSHH-HHH----HHHHHH--------SCSSCEEE
T ss_pred             EcCCCCCCCC--CcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEecCchH-HHH----HHHHHh--------CChhcEEe
Confidence            9987543221  23456788999999999998888754444433331110 000    000000        01112233


Q ss_pred             h-HHHHHHHHHHHHHHhcCCceEEEecceeeCCC
Q 023689          166 V-SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPL  198 (278)
Q Consensus       166 ~-sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~  198 (278)
                      . +..-..++....++..|++...++. .+.|++
T Consensus       138 ~gt~Ld~~r~~~~la~~l~v~~~~v~~-~v~G~H  170 (304)
T 2v6b_A          138 SGTVLDSARFRHLMAQHAGVDGTHAHG-YVLGEH  170 (304)
T ss_dssp             CTTHHHHHHHHHHHHHHHTSCGGGEEC-CEEESS
T ss_pred             CCcCchHHHHHHHHHHHhCcCHHHceE-EEecCC
Confidence            3 3333344444445566777777776 777776

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=97.13  E-value=0.0004  Score=58.16  Aligned_cols=69  Identities=13%  Similarity=0.152  Sum_probs=51.9

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEe
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~   87 (278)
                      .+.+|||+|+ |.+|...++.+...|. +|+++++++++.+.++++      +...+.   .+.+.+.+   ++|+||.+
T Consensus       176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~l------Ga~~v~---~~~~~~~~---~~D~vid~  241 (348)
T 3two_A          176 KGTKVGVAGF-GGLGSMAVKYAVAMGA-EVSVFARNEHKKQDALSM------GVKHFY---TDPKQCKE---ELDFIIST  241 (348)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTC-EEEEECSSSTTHHHHHHT------TCSEEE---SSGGGCCS---CEEEEEEC
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhc------CCCeec---CCHHHHhc---CCCEEEEC
Confidence            4689999997 9999999999988999 899999888777766654      222222   34443332   89999999


Q ss_pred             ccc
Q 023689           88 ASP   90 (278)
Q Consensus        88 a~~   90 (278)
                      ++.
T Consensus       242 ~g~  244 (348)
T 3two_A          242 IPT  244 (348)
T ss_dssp             CCS
T ss_pred             CCc
Confidence            875

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=97.13  E-value=0.00084  Score=56.87  Aligned_cols=76  Identities=16%  Similarity=0.140  Sum_probs=56.3

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEcc----------------CCC-
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEAD----------------VLD-   70 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D----------------l~d-   70 (278)
                      .+.+|+|+|+ |-+|...++.+...|+ +|++.++++...+....+      +.+++..+                +++ 
T Consensus       189 ~~~kV~ViG~-G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~~------G~~~~~~~~~~~~d~~~~~~ya~e~s~~  260 (405)
T 4dio_A          189 PAAKIFVMGA-GVAGLQAIATARRLGA-VVSATDVRPAAKEQVASL------GAKFIAVEDEEFKAAETAGGYAKEMSGE  260 (405)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSSTTHHHHHHHT------TCEECCCCC-----------------CH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHc------CCceeecccccccccccccchhhhcchh
Confidence            4579999999 9999999999999999 899999888765554443      33333322                222 


Q ss_pred             -----hhhHHHHhcCccEEEEecccC
Q 023689           71 -----SGAVSRAVEGCKGVFHVASPC   91 (278)
Q Consensus        71 -----~~~~~~~~~~~d~vi~~a~~~   91 (278)
                           .+.+.++++++|+||.++...
T Consensus       261 ~~~~~~~~l~e~l~~aDVVI~tvlip  286 (405)
T 4dio_A          261 YQVKQAALVAEHIAKQDIVITTALIP  286 (405)
T ss_dssp             HHHHHHHHHHHHHHTCSEEEECCCCS
T ss_pred             hhhhhHhHHHHHhcCCCEEEECCcCC
Confidence                 247888899999999987553

>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}

Probab=97.13  E-value=0.0027  Score=51.31  Aligned_cols=72  Identities=22%  Similarity=0.279  Sum_probs=44.5

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHC-CCCeEEEE-ecCCCC--CcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDN-NYTSINAT-VFPGSD--SSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~-g~~~v~~~-~r~~~~--~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~v   84 (278)
                      ++||.|.|++|-+|+.+++.+.+. +. ++++. +++.+.  ......+.+...       .++.-.+++.+++.++|+|
T Consensus        21 ~irV~V~Ga~GrMGr~i~~~v~~~~~~-eLvg~vd~~~~~~~G~d~gel~G~~~-------~gv~v~~dl~~ll~~aDVv   92 (288)
T 3ijp_A           21 SMRLTVVGANGRMGRELITAIQRRKDV-ELCAVLVRKGSSFVDKDASILIGSDF-------LGVRITDDPESAFSNTEGI   92 (288)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTCSSE-EEEEEBCCTTCTTTTSBGGGGTTCSC-------CSCBCBSCHHHHTTSCSEE
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCCCC-EEEEEEecCCccccccchHHhhccCc-------CCceeeCCHHHHhcCCCEE
Confidence            469999999999999999998865 55 55555 444322  111111111111       2222234567777889999


Q ss_pred             EEec
Q 023689           85 FHVA   88 (278)
Q Consensus        85 i~~a   88 (278)
                      |.+.
T Consensus        93 IDFT   96 (288)
T 3ijp_A           93 LDFS   96 (288)
T ss_dssp             EECS
T ss_pred             EEcC
Confidence            9875

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=97.12  E-value=0.0031  Score=51.50  Aligned_cols=64  Identities=25%  Similarity=0.271  Sum_probs=43.3

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEec
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a   88 (278)
                      +||-++|- |.+|..+++.|++.|+ +|++.+|++++.+.+...      +.+.       .++..++++++|+||-+-
T Consensus         6 ~kIgfIGL-G~MG~~mA~~L~~~G~-~V~v~dr~~~~~~~l~~~------G~~~-------~~s~~e~~~~~dvvi~~l   69 (297)
T 4gbj_A            6 EKIAFLGL-GNLGTPIAEILLEAGY-ELVVWNRTASKAEPLTKL------GATV-------VENAIDAITPGGIVFSVL   69 (297)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTC-EEEEC-------CTTTTT------TCEE-------CSSGGGGCCTTCEEEECC
T ss_pred             CcEEEEec-HHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHc------CCeE-------eCCHHHHHhcCCceeeec
Confidence            47999976 9999999999999999 999999988776655432      2221       134566788899998763

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=97.11  E-value=0.00027  Score=57.08  Aligned_cols=69  Identities=14%  Similarity=0.200  Sum_probs=50.3

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      .++++++|+|+ |+.|+.++..|.+.|..+|++..|+.++.+.+..       .+..+     ..+++.+ + ++|+||+
T Consensus       120 ~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~-------~~~~~-----~~~~l~~-l-~~DivIn  184 (282)
T 3fbt_A          120 IKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYG-------EFKVI-----SYDELSN-L-KGDVIIN  184 (282)
T ss_dssp             CTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCT-------TSEEE-----EHHHHTT-C-CCSEEEE
T ss_pred             ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH-------hcCcc-----cHHHHHh-c-cCCEEEE
Confidence            45789999998 7899999999999998788888888766554433       22221     1233334 4 8999999


Q ss_pred             eccc
Q 023689           87 VASP   90 (278)
Q Consensus        87 ~a~~   90 (278)
                      +...
T Consensus       185 aTp~  188 (282)
T 3fbt_A          185 CTPK  188 (282)
T ss_dssp             CSST
T ss_pred             CCcc
Confidence            8754

>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}

Probab=97.11  E-value=0.00091  Score=55.95  Aligned_cols=33  Identities=24%  Similarity=0.440  Sum_probs=27.6

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEe
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATV   41 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~   41 (278)
                      |+||.|.||+|++|+.+++.|.++...+++++.
T Consensus         4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~   36 (350)
T 2ep5_A            4 KIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVS   36 (350)
T ss_dssp             CEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred             CcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEe
Confidence            478999999999999999999877544676664

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.11  E-value=0.00023  Score=59.59  Aligned_cols=97  Identities=12%  Similarity=0.092  Sum_probs=61.7

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChh---hHHHHhc--Ccc
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSG---AVSRAVE--GCK   82 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~---~~~~~~~--~~d   82 (278)
                      .+.+|||+|+ |.+|..+++.+...|+.+|+++++++++.+..+.+      +...+ .|..+.+   .+.++..  ++|
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~------Ga~~~-~~~~~~~~~~~v~~~~~g~g~D  238 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKV------GADYV-INPFEEDVVKEVMDITDGNGVD  238 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHH------TCSEE-ECTTTSCHHHHHHHHTTTSCEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh------CCCEE-ECCCCcCHHHHHHHHcCCCCCC
Confidence            5679999999 99999999999889985688888876554444333      22111 3444433   2333332  689


Q ss_pred             EEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        83 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      +||++++..                 ......++.++..  ++++.+++
T Consensus       239 ~vid~~g~~-----------------~~~~~~~~~l~~~--G~iv~~g~  268 (348)
T 2d8a_A          239 VFLEFSGAP-----------------KALEQGLQAVTPA--GRVSLLGL  268 (348)
T ss_dssp             EEEECSCCH-----------------HHHHHHHHHEEEE--EEEEECCC
T ss_pred             EEEECCCCH-----------------HHHHHHHHHHhcC--CEEEEEcc
Confidence            999997631                 1123444555444  47888775

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.10  E-value=0.00039  Score=58.72  Aligned_cols=74  Identities=12%  Similarity=0.087  Sum_probs=53.4

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEe
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~   87 (278)
                      .+.+|||+|+ |.+|...++.+...|+ .|+++++++++.+.++++      +... ..|..+.+.+.++..++|+||.+
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga-~Vi~~~~~~~~~~~a~~l------Ga~~-vi~~~~~~~~~~~~~g~Dvvid~  264 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKAL------GADE-VVNSRNADEMAAHLKSFDFILNT  264 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHH------TCSE-EEETTCHHHHHTTTTCEEEEEEC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc------CCcE-EeccccHHHHHHhhcCCCEEEEC
Confidence            4679999998 7899999999888999 799998877665555443      2211 13555555455555689999999


Q ss_pred             ccc
Q 023689           88 ASP   90 (278)
Q Consensus        88 a~~   90 (278)
                      ++.
T Consensus       265 ~g~  267 (369)
T 1uuf_A          265 VAA  267 (369)
T ss_dssp             CSS
T ss_pred             CCC
Confidence            875

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.10  E-value=0.00033  Score=60.93  Aligned_cols=45  Identities=18%  Similarity=0.200  Sum_probs=36.7

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccC
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL   53 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~   53 (278)
                      .+.+|||+||+|.||...++.+...|+ .|+++++++++.+.++.+
T Consensus       228 ~g~~VlV~GasG~vG~~avqlak~~Ga-~vi~~~~~~~~~~~~~~l  272 (456)
T 3krt_A          228 QGDNVLIWGASGGLGSYATQFALAGGA-NPICVVSSPQKAEICRAM  272 (456)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEECCHHHHHHHHhh
Confidence            467999999999999999999999999 888888766655555443

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=97.09  E-value=0.0005  Score=57.76  Aligned_cols=74  Identities=12%  Similarity=0.018  Sum_probs=53.8

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      .+.+|||+|+ |.+|...++.+...|. .|+++++++++.+... .+..    .. .  .|..+.+.+.++..++|+||+
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga-~Vi~~~~~~~~~~~~~~~lGa----~~-v--i~~~~~~~~~~~~~g~D~vid  250 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGH-HVTVISSSNKKREEALQDLGA----DD-Y--VIGSDQAKMSELADSLDYVID  250 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTC-EEEEEESSTTHHHHHHTTSCC----SC-E--EETTCHHHHHHSTTTEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHcCC----ce-e--eccccHHHHHHhcCCCCEEEE
Confidence            5679999996 9999999998888899 8999988776554443 3311    11 1  244455666666678999999


Q ss_pred             eccc
Q 023689           87 VASP   90 (278)
Q Consensus        87 ~a~~   90 (278)
                      ++|.
T Consensus       251 ~~g~  254 (357)
T 2cf5_A          251 TVPV  254 (357)
T ss_dssp             CCCS
T ss_pred             CCCC
Confidence            9874

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=97.08  E-value=0.00041  Score=60.15  Aligned_cols=45  Identities=20%  Similarity=0.255  Sum_probs=37.1

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccC
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL   53 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~   53 (278)
                      .+++|||+||+|.||...++.+...|. .|+++++++++.+.++.+
T Consensus       220 ~g~~VlV~GasG~iG~~a~qla~~~Ga-~vi~~~~~~~~~~~~~~l  264 (447)
T 4a0s_A          220 QGDIVLIWGASGGLGSYAIQFVKNGGG-IPVAVVSSAQKEAAVRAL  264 (447)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhc
Confidence            468999999999999999999999999 888888776655555443

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=97.07  E-value=0.00023  Score=58.87  Aligned_cols=74  Identities=11%  Similarity=0.109  Sum_probs=52.4

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEe
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~   87 (278)
                      .+.+|||+||+|.+|...++.+...|+ .|+++.++.+ .+..+++      +... ..|..+.+.+.+.++++|+||.+
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga-~vi~~~~~~~-~~~~~~l------Ga~~-~i~~~~~~~~~~~~~g~D~v~d~  222 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQKGT-TVITTASKRN-HAFLKAL------GAEQ-CINYHEEDFLLAISTPVDAVIDL  222 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEECHHH-HHHHHHH------TCSE-EEETTTSCHHHHCCSCEEEEEES
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeccch-HHHHHHc------CCCE-EEeCCCcchhhhhccCCCEEEEC
Confidence            467999999999999999999999999 7888775432 3333332      2211 13555544466777899999998


Q ss_pred             ccc
Q 023689           88 ASP   90 (278)
Q Consensus        88 a~~   90 (278)
                      +|.
T Consensus       223 ~g~  225 (321)
T 3tqh_A          223 VGG  225 (321)
T ss_dssp             SCH
T ss_pred             CCc
Confidence            763

>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A

Probab=97.07  E-value=0.0021  Score=53.92  Aligned_cols=94  Identities=14%  Similarity=0.114  Sum_probs=53.2

Q ss_pred             ceEEEeCcchhhHHHHHH-HHHHCCC--CeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689           10 ETVCVTGANGFIGTWLVK-TLLDNNY--TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~-~L~~~g~--~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      |+|-|.||||++|+.|++ .|.++.+  .++..+..+. ....+..+.+.   ...+  -|..+++    .++++|+||-
T Consensus         1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~-aG~~~~~~~~~---~~~~--~~~~~~~----~~~~~Dvvf~   70 (370)
T 3pzr_A            1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQ-IGVPAPNFGKD---AGML--HDAFDIE----SLKQLDAVIT   70 (370)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSS-TTSBCCCSSSC---CCBC--EETTCHH----HHTTCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEeccc-cCcCHHHhCCC---ceEE--EecCChh----HhccCCEEEE
Confidence            479999999999999999 6666652  2555544332 22222222211   1111  1232322    2578999998


Q ss_pred             ecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCC-EEEEecc
Q 023689           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTSS  131 (278)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~-~~v~~Ss  131 (278)
                      +.+...                  +..+...+.+.|.+ ++|-.|+
T Consensus        71 a~~~~~------------------s~~~~~~~~~~G~k~~VID~ss   98 (370)
T 3pzr_A           71 CQGGSY------------------TEKVYPALRQAGWKGYWIDAAS   98 (370)
T ss_dssp             CSCHHH------------------HHHHHHHHHHTTCCCEEEECSS
T ss_pred             CCChHH------------------HHHHHHHHHHCCCCEEEEeCCc
Confidence            865311                  33455555667764 5666665

>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A

Probab=97.07  E-value=0.0024  Score=53.11  Aligned_cols=94  Identities=18%  Similarity=0.209  Sum_probs=55.2

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCC--CeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNY--TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~--~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      +++|.|.||||++|..|++.|.++.+  .++..+..+...-..+. +.+  . .+.+.  |+..     +.++++|+||.
T Consensus         1 ~~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~~~aG~~~~-~~~--~-~~~~~--~~~~-----~~~~~~Dvvf~   69 (344)
T 3tz6_A            1 GLSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARSQGRKLA-FRG--Q-EIEVE--DAET-----ADPSGLDIALF   69 (344)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTSSCEEE-ETT--E-EEEEE--ETTT-----SCCTTCSEEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECcccCCCcee-ecC--C-ceEEE--eCCH-----HHhccCCEEEE
Confidence            36899999999999999999888743  24555543332222221 211  0 22222  2221     22478999998


Q ss_pred             ecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecce
Q 023689           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSI  132 (278)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~  132 (278)
                      +.+...                  +......+.+.|. ++|-.|+.
T Consensus        70 a~~~~~------------------s~~~a~~~~~~G~-~vID~Sa~   96 (344)
T 3tz6_A           70 SAGSAM------------------SKVQAPRFAAAGV-TVIDNSSA   96 (344)
T ss_dssp             CSCHHH------------------HHHHHHHHHHTTC-EEEECSST
T ss_pred             CCChHH------------------HHHHHHHHHhCCC-EEEECCCc
Confidence            865311                  3345555666775 67777763

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=97.06  E-value=0.00023  Score=58.49  Aligned_cols=39  Identities=15%  Similarity=0.151  Sum_probs=32.6

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcc
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSH   49 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~   49 (278)
                      ||+|.|.|+ |.+|..++..|.+.|+ +|++.+|+++..+.
T Consensus         3 ~m~i~iiG~-G~~G~~~a~~l~~~g~-~V~~~~r~~~~~~~   41 (316)
T 2ew2_A            3 AMKIAIAGA-GAMGSRLGIMLHQGGN-DVTLIDQWPAHIEA   41 (316)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSCHHHHHH
T ss_pred             CCeEEEECc-CHHHHHHHHHHHhCCC-cEEEEECCHHHHHH
Confidence            478999997 9999999999999999 89999887654433

>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A

Probab=97.05  E-value=0.0021  Score=52.58  Aligned_cols=112  Identities=13%  Similarity=0.111  Sum_probs=69.7

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCC-CeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      .+++||.|+|| |.+|..++..|+..|. .+|.+.+.+++.......+......+++..    .|   + +.++++|+||
T Consensus        12 ~~~~kV~ViGa-G~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~~~~~i~~t----~d---~-~~l~~aD~Vi   82 (303)
T 2i6t_A           12 KTVNKITVVGG-GELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEIS----KD---L-SASAHSKVVI   82 (303)
T ss_dssp             --CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHHHTCTTEEEE----SC---G-GGGTTCSEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhhcCCCeEEe----CC---H-HHHCCCCEEE
Confidence            34689999997 9999999999998875 467777776532111111100010133331    22   3 4589999999


Q ss_pred             EecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEec
Q 023689           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS  130 (278)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~S  130 (278)
                      -.++....   .......+..|+.....+++.+.+.....++.+-
T Consensus        83 ~aag~~~p---G~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~  124 (303)
T 2i6t_A           83 FTVNSLGS---SQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVA  124 (303)
T ss_dssp             ECCCC-------CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEC
T ss_pred             EcCCCCCC---CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEc
Confidence            99987432   2346778889999999999999887544444333

>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*

Probab=97.05  E-value=0.0018  Score=55.27  Aligned_cols=68  Identities=21%  Similarity=0.241  Sum_probs=52.1

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCC-CcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~-~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      +++|+|+|+ |.+|+.+++.+.+.|+ +|++++ .+.. ......       ....+.+|..|.+.+.++++.+|+|+.
T Consensus        24 ~~~I~ilGg-G~lg~~l~~aa~~lG~-~v~~~d-~~~~p~~~~ad-------~~~~~~~~~~d~~~l~~~a~~~d~i~~   92 (403)
T 3k5i_A           24 SRKVGVLGG-GQLGRMLVESANRLNI-QVNVLD-ADNSPAKQISA-------HDGHVTGSFKEREAVRQLAKTCDVVTA   92 (403)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTC-EEEEEE-STTCTTGGGCC-------SSCCEESCTTCHHHHHHHHTTCSEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCC-EEEEEE-CCCCcHHHhcc-------ccceeecCCCCHHHHHHHHHhCCEEEE
Confidence            479999998 8999999999999999 787777 4322 111111       123567899999999999999998864

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.04  E-value=0.00045  Score=55.89  Aligned_cols=75  Identities=20%  Similarity=0.171  Sum_probs=49.8

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      +++|+++|+|+ |++|+.++..|.+.|+.+|++..|+.++.+.+........ .+...  ++.+      +..++|+||+
T Consensus       124 l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~-~~~~~--~~~~------l~~~aDiIIn  193 (281)
T 3o8q_A          124 LKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYG-EVKAQ--AFEQ------LKQSYDVIIN  193 (281)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGS-CEEEE--EGGG------CCSCEEEEEE
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccC-CeeEe--eHHH------hcCCCCEEEE
Confidence            46789999998 7899999999999996689888887765444322111000 23332  2211      1268999999


Q ss_pred             ecccC
Q 023689           87 VASPC   91 (278)
Q Consensus        87 ~a~~~   91 (278)
                      +....
T Consensus       194 aTp~g  198 (281)
T 3o8q_A          194 STSAS  198 (281)
T ss_dssp             CSCCC
T ss_pred             cCcCC
Confidence            87543

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.04  E-value=0.0008  Score=55.76  Aligned_cols=72  Identities=19%  Similarity=0.211  Sum_probs=48.2

Q ss_pred             eEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCCh--hhHHHHh-cCccEEEEe
Q 023689           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS--GAVSRAV-EGCKGVFHV   87 (278)
Q Consensus        11 ~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~--~~~~~~~-~~~d~vi~~   87 (278)
                      +|||+||+|.+|...++.+...|+ .|+++++++++.+.++.+      +...+ .|..+.  +.+.++. .++|+||++
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~l------Ga~~~-i~~~~~~~~~~~~~~~~~~d~vid~  223 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRVL------GAKEV-LAREDVMAERIRPLDKQRWAAAVDP  223 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHHT------TCSEE-EECC---------CCSCCEEEEEEC
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHc------CCcEE-EecCCcHHHHHHHhcCCcccEEEEC
Confidence            799999999999999999999999 799999887766655554      22111 233332  1222222 258999999


Q ss_pred             ccc
Q 023689           88 ASP   90 (278)
Q Consensus        88 a~~   90 (278)
                      +|.
T Consensus       224 ~g~  226 (328)
T 1xa0_A          224 VGG  226 (328)
T ss_dssp             STT
T ss_pred             CcH
Confidence            764

>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1

Probab=97.03  E-value=0.0096  Score=48.25  Aligned_cols=90  Identities=22%  Similarity=0.258  Sum_probs=59.2

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc--CccEEE
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVF   85 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vi   85 (278)
                      +.++|+|.|+||-.|+.+++.|.+.|+ +++..+.........               .++.-..++.++.+  .+|+++
T Consensus         6 ~~~~VaVvGasG~~G~~~~~~l~~~g~-~~v~~VnP~~~g~~i---------------~G~~vy~sl~el~~~~~~Dv~I   69 (288)
T 1oi7_A            6 RETRVLVQGITGREGQFHTKQMLTYGT-KIVAGVTPGKGGMEV---------------LGVPVYDTVKEAVAHHEVDASI   69 (288)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEECTTCTTCEE---------------TTEEEESSHHHHHHHSCCSEEE
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHcCC-eEEEEECCCCCCceE---------------CCEEeeCCHHHHhhcCCCCEEE
Confidence            347899999999999999999999999 555444332211110               11222334566666  899998


Q ss_pred             EecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      -+...          +.        +..+++.|.+.|++.+|.+++
T Consensus        70 i~vp~----------~~--------~~~~~~ea~~~Gi~~vVi~t~   97 (288)
T 1oi7_A           70 IFVPA----------PA--------AADAALEAAHAGIPLIVLITE   97 (288)
T ss_dssp             ECCCH----------HH--------HHHHHHHHHHTTCSEEEECCS
T ss_pred             EecCH----------HH--------HHHHHHHHHHCCCCEEEEECC
Confidence            76322          11        456778888889887777775

>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8

Probab=97.03  E-value=0.0022  Score=45.91  Aligned_cols=87  Identities=18%  Similarity=0.230  Sum_probs=55.1

Q ss_pred             CCceEEEeCcc---hhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEE
Q 023689            8 EEETVCVTGAN---GFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (278)
Q Consensus         8 ~~~~vlItGat---G~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~v   84 (278)
                      +.++|.|.|+|   |-+|..+++.|++.|+ +|+....+.   +.+.        ++       .-..++.++.+.+|++
T Consensus        13 ~p~~IavIGaS~~~g~~G~~~~~~L~~~G~-~V~~vnp~~---~~i~--------G~-------~~~~s~~el~~~vDlv   73 (138)
T 1y81_A           13 EFRKIALVGASKNPAKYGNIILKDLLSKGF-EVLPVNPNY---DEIE--------GL-------KCYRSVRELPKDVDVI   73 (138)
T ss_dssp             -CCEEEEETCCSCTTSHHHHHHHHHHHTTC-EEEEECTTC---SEET--------TE-------ECBSSGGGSCTTCCEE
T ss_pred             CCCeEEEEeecCCCCCHHHHHHHHHHHCCC-EEEEeCCCC---CeEC--------Ce-------eecCCHHHhCCCCCEE
Confidence            45789999998   8999999999999999 766554432   1111        22       2223344555678998


Q ss_pred             EEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      +-+...          ..        ...+++.|.+.+++.++..++
T Consensus        74 ii~vp~----------~~--------v~~v~~~~~~~g~~~i~~~~~  102 (138)
T 1y81_A           74 VFVVPP----------KV--------GLQVAKEAVEAGFKKLWFQPG  102 (138)
T ss_dssp             EECSCH----------HH--------HHHHHHHHHHTTCCEEEECTT
T ss_pred             EEEeCH----------HH--------HHHHHHHHHHcCCCEEEEcCc
Confidence            866321          11        334556666678877666553

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=97.02  E-value=0.0018  Score=53.18  Aligned_cols=112  Identities=13%  Similarity=0.032  Sum_probs=69.4

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCC--CCeEEEEecCCCCCccccc-CC---CCCCCceEEEEccCCChhhHHHHhcCcc
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNN--YTSINATVFPGSDSSHLFA-LP---GAGDANLRVFEADVLDSGAVSRAVEGCK   82 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g--~~~v~~~~r~~~~~~~~~~-~~---~~~~~~v~~~~~Dl~d~~~~~~~~~~~d   82 (278)
                      ||||.|+| +|.+|..++..|.+.|  + +|++.+++++..+.+.. +.   ......+....   .|   . +.++++|
T Consensus         1 m~kI~VIG-aG~~G~~la~~L~~~g~~~-~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~---~d---~-~~~~~aD   71 (309)
T 1hyh_A            1 ARKIGIIG-LGNVGAAVAHGLIAQGVAD-DYVFIDANEAKVKADQIDFQDAMANLEAHGNIVI---ND---W-AALADAD   71 (309)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHHTCCS-EEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEE---SC---G-GGGTTCS
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCCC-EEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEe---CC---H-HHhCCCC
Confidence            46899999 5999999999999998  5 89999887644322211 00   00000223222   22   2 4578999


Q ss_pred             EEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           83 GVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        83 ~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      +||-+++....    ..  ......+..|+.....+++.+.+.....+|.+.|
T Consensus        72 vViiav~~~~~~~~~~g--~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii~~t  122 (309)
T 1hyh_A           72 VVISTLGNIKLQQDNPT--GDRFAELKFTSSMVQSVGTNLKESGFHGVLVVIS  122 (309)
T ss_dssp             EEEECCSCGGGTC---------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EEEEecCCcccCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEc
Confidence            99998865331    11  2235677888888888888887765343433333

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=97.02  E-value=0.00027  Score=55.12  Aligned_cols=66  Identities=14%  Similarity=0.029  Sum_probs=45.1

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEE-EecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEe
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINA-TVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~-~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~   87 (278)
                      ||+|.|+| +|.+|..+++.|.+.|+ +|++ .+|+++..+.+....     ++...       .+..+.++++|+||-+
T Consensus        23 mmkI~IIG-~G~mG~~la~~l~~~g~-~V~~v~~r~~~~~~~l~~~~-----g~~~~-------~~~~~~~~~aDvVila   88 (220)
T 4huj_A           23 MTTYAIIG-AGAIGSALAERFTAAQI-PAIIANSRGPASLSSVTDRF-----GASVK-------AVELKDALQADVVILA   88 (220)
T ss_dssp             SCCEEEEE-CHHHHHHHHHHHHHTTC-CEEEECTTCGGGGHHHHHHH-----TTTEE-------ECCHHHHTTSSEEEEE
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCC-EEEEEECCCHHHHHHHHHHh-----CCCcc-------cChHHHHhcCCEEEEe
Confidence            67999999 59999999999999999 7777 777766554432210     11111       1123446889999977


Q ss_pred             c
Q 023689           88 A   88 (278)
Q Consensus        88 a   88 (278)
                      .
T Consensus        89 v   89 (220)
T 4huj_A           89 V   89 (220)
T ss_dssp             S
T ss_pred             C
Confidence            4

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=97.02  E-value=0.00069  Score=57.77  Aligned_cols=76  Identities=13%  Similarity=0.053  Sum_probs=53.7

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCC-------------Ch--
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVL-------------DS--   71 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~-------------d~--   71 (278)
                      ..+++|+|+|+ |-+|..+++.+...|. +|++.++++...+....+      +.+++..|..             +.  
T Consensus       170 l~g~~V~ViGa-G~iG~~aa~~a~~~Ga-~V~v~D~~~~~~~~~~~l------Ga~~~~~~~~~~~~~~~g~~~~~~~~~  241 (401)
T 1x13_A          170 VPPAKVMVIGA-GVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSM------GAEFLELDFKEEAGSGDGYAKVMSDAF  241 (401)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSCGGGHHHHHHT------TCEECCC--------CCHHHHHHSHHH
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHc------CCEEEEecccccccccccchhhccHHH
Confidence            45789999997 9999999999999999 899998877654444433      3333322321             11  


Q ss_pred             -----hhHHHHhcCccEEEEeccc
Q 023689           72 -----GAVSRAVEGCKGVFHVASP   90 (278)
Q Consensus        72 -----~~~~~~~~~~d~vi~~a~~   90 (278)
                           +.+.+.++++|+||.+++.
T Consensus       242 ~~~~~~~l~e~~~~aDvVI~~~~~  265 (401)
T 1x13_A          242 IKAEMELFAAQAKEVDIIVTTALI  265 (401)
T ss_dssp             HHHHHHHHHHHHHHCSEEEECCCC
T ss_pred             HHHHHHHHHHHhCCCCEEEECCcc
Confidence                 1467777889999998644

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=97.02  E-value=0.0021  Score=52.68  Aligned_cols=82  Identities=9%  Similarity=-0.008  Sum_probs=54.8

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccc-ccCCCCCCCceEEEEccCCChhhHHHHhcCccEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL-FALPGAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~-~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~v   84 (278)
                      ++.+++++|.|++.-+|+.+++.|+..|. .|+...|+....... ..+...   .........++++++.+.++.+|+|
T Consensus       174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gA-tVtv~nR~~~~l~~ra~~la~~---~~~~t~~~~t~~~~L~e~l~~ADIV  249 (320)
T 1edz_A          174 RLYGKKCIVINRSEIVGRPLAALLANDGA-TVYSVDVNNIQKFTRGESLKLN---KHHVEDLGEYSEDLLKKCSLDSDVV  249 (320)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSC-EEEEECSSEEEEEESCCCSSCC---CCEEEEEEECCHHHHHHHHHHCSEE
T ss_pred             CCCCCEEEEECCCcchHHHHHHHHHHCCC-EEEEEeCchHHHHhHHHHHhhh---cccccccccccHhHHHHHhccCCEE
Confidence            56789999999988899999999999998 788776653221111 111100   0111111113457899999999999


Q ss_pred             EEecccC
Q 023689           85 FHVASPC   91 (278)
Q Consensus        85 i~~a~~~   91 (278)
                      |.+.+..
T Consensus       250 IsAtg~p  256 (320)
T 1edz_A          250 ITGVPSE  256 (320)
T ss_dssp             EECCCCT
T ss_pred             EECCCCC
Confidence            9887753

>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*

Probab=97.01  E-value=0.0021  Score=53.96  Aligned_cols=95  Identities=13%  Similarity=0.100  Sum_probs=53.2

Q ss_pred             CceEEEeCcchhhHHHHHHH-HHHCCC--CeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            9 EETVCVTGANGFIGTWLVKT-LLDNNY--TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~-L~~~g~--~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      |+||.|.||||++|+.|++. |.++++  ..+..+..+ +....+..+.+     ......|..+++.    ++++|+||
T Consensus         1 m~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~-s~G~~v~~~~g-----~~i~~~~~~~~~~----~~~~DvVf   70 (367)
T 1t4b_A            1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTS-QLGQAAPSFGG-----TTGTLQDAFDLEA----LKALDIIV   70 (367)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS-STTSBCCGGGT-----CCCBCEETTCHHH----HHTCSEEE
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeC-CCCCCccccCC-----CceEEEecCChHH----hcCCCEEE
Confidence            57999999999999999995 444443  244445443 22111111111     1111223334433    36899999


Q ss_pred             EecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCC-EEEEecc
Q 023689           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTSS  131 (278)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~-~~v~~Ss  131 (278)
                      -+.+.                  ..+..+...+.+.|.+ .+|=.||
T Consensus        71 ~a~g~------------------~~s~~~a~~~~~~G~k~vVID~ss   99 (367)
T 1t4b_A           71 TCQGG------------------DYTNEIYPKLRESGWQGYWIDAAS   99 (367)
T ss_dssp             ECSCH------------------HHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             ECCCc------------------hhHHHHHHHHHHCCCCEEEEcCCh
Confidence            88653                  1144566666777864 3444444

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=96.99  E-value=0.0008  Score=55.54  Aligned_cols=111  Identities=15%  Similarity=0.127  Sum_probs=69.9

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCC-----CCCCceEEEEccCCChhhHHHHhcCcc
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPG-----AGDANLRVFEADVLDSGAVSRAVEGCK   82 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~-----~~~~~v~~~~~Dl~d~~~~~~~~~~~d   82 (278)
                      .|||.|+|+ |.+|..++..|.+.|+.+|++.+++++..+... .+..     ....++...    +   ++ ++++++|
T Consensus         4 ~~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t----~---d~-~a~~~aD   74 (317)
T 2ewd_A            4 RRKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGT----D---DY-ADISGSD   74 (317)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE----S---CG-GGGTTCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEEC----C---CH-HHhCCCC
Confidence            368999998 999999999999999745888888765433210 0000     000012111    1   23 4678999


Q ss_pred             EEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCE-EEEec
Q 023689           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRR-VVVTS  130 (278)
Q Consensus        83 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~-~v~~S  130 (278)
                      +||-+++......  ....+.+..|......+++.+.+..... ++.+|
T Consensus        75 iVi~avg~p~~~g--~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~s  121 (317)
T 2ewd_A           75 VVIITASIPGRPK--DDRSELLFGNARILDSVAEGVKKYCPNAFVICIT  121 (317)
T ss_dssp             EEEECCCCSSCCS--SCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred             EEEEeCCCCCCCC--CcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeC
Confidence            9999987644322  2334566778888888888887764343 44444

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=96.98  E-value=0.0024  Score=55.34  Aligned_cols=81  Identities=12%  Similarity=-0.019  Sum_probs=54.0

Q ss_pred             CccccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCC-cccccCCCCCCCceEEEEccCCChhhHHHHhc
Q 023689            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-SHLFALPGAGDANLRVFEADVLDSGAVSRAVE   79 (278)
Q Consensus         1 m~~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~-~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~   79 (278)
                      |..|+++++|+|+|.|. |..|..+++.|.+.|+ .|.+.+++.... .....+...   ++++..+.-.  +   +.++
T Consensus         1 m~~~~~~~~k~v~viG~-G~sG~s~A~~l~~~G~-~V~~~D~~~~~~~~~~~~L~~~---gi~~~~g~~~--~---~~~~   70 (451)
T 3lk7_A            1 MKTITTFENKKVLVLGL-ARSGEAAARLLAKLGA-IVTVNDGKPFDENPTAQSLLEE---GIKVVCGSHP--L---ELLD   70 (451)
T ss_dssp             ---CCTTTTCEEEEECC-TTTHHHHHHHHHHTTC-EEEEEESSCGGGCHHHHHHHHT---TCEEEESCCC--G---GGGG
T ss_pred             CcchhhcCCCEEEEEee-CHHHHHHHHHHHhCCC-EEEEEeCCcccCChHHHHHHhC---CCEEEECCCh--H---Hhhc
Confidence            55566778899999999 8899999999999999 999998865321 111111111   6666655432  2   2345


Q ss_pred             C-ccEEEEecccC
Q 023689           80 G-CKGVFHVASPC   91 (278)
Q Consensus        80 ~-~d~vi~~a~~~   91 (278)
                      + +|.||...|+.
T Consensus        71 ~~~d~vv~spgi~   83 (451)
T 3lk7_A           71 EDFCYMIKNPGIP   83 (451)
T ss_dssp             SCEEEEEECTTSC
T ss_pred             CCCCEEEECCcCC
Confidence            5 89999887763

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=96.98  E-value=0.0031  Score=51.10  Aligned_cols=107  Identities=11%  Similarity=0.134  Sum_probs=65.5

Q ss_pred             cccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccC-------------------CC-CCCCceEEE
Q 023689            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL-------------------PG-AGDANLRVF   64 (278)
Q Consensus         5 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~-------------------~~-~~~~~v~~~   64 (278)
                      .+++.++|+|.|+ |++|+++++.|...|.-.+.+++.+.-....+...                   .. ....+++.+
T Consensus        32 ~kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~  110 (292)
T 3h8v_A           32 EKIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVH  110 (292)
T ss_dssp             CGGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEe
Confidence            3556689999988 99999999999999987788777654222222110                   00 011256666


Q ss_pred             EccCCChhhHHHHh-----------cCccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEec
Q 023689           65 EADVLDSGAVSRAV-----------EGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS  130 (278)
Q Consensus        65 ~~Dl~d~~~~~~~~-----------~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~S  130 (278)
                      ..++++.+.+.+++           +++|+||.+.         ++.        ..-..+-++|.+.+. .+|+.+
T Consensus       111 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~---------Dn~--------~~R~~in~~c~~~~~-Pli~~g  169 (292)
T 3h8v_A          111 NYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCV---------DNF--------EARMTINTACNELGQ-TWMESG  169 (292)
T ss_dssp             CCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECC---------SSH--------HHHHHHHHHHHHHTC-CEEEEE
T ss_pred             cccCCcHHHHHHHhhhhcccccccCCCCCEEEECC---------cch--------hhhhHHHHHHHHhCC-CEEEee
Confidence            67777656666554           5789998763         222        112345567777774 466644

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=96.98  E-value=0.00062  Score=56.91  Aligned_cols=75  Identities=11%  Similarity=0.052  Sum_probs=51.3

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCC--hhhHHHHh-cCccEE
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD--SGAVSRAV-EGCKGV   84 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d--~~~~~~~~-~~~d~v   84 (278)
                      .+.+|||+||+|.+|...++.+...|+ +|+++.+++++.+.++++      +...+ .|..+  .+.+.+.- .++|+|
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~l------Ga~~v-i~~~~~~~~~~~~~~~~g~Dvv  221 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGL-RVITTASRNETIEWTKKM------GADIV-LNHKESLLNQFKTQGIELVDYV  221 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEECCSHHHHHHHHHH------TCSEE-ECTTSCHHHHHHHHTCCCEEEE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhc------CCcEE-EECCccHHHHHHHhCCCCccEE
Confidence            578999999999999999999999999 899998876655555443      11111 22222  12333331 258999


Q ss_pred             EEeccc
Q 023689           85 FHVASP   90 (278)
Q Consensus        85 i~~a~~   90 (278)
                      |++++.
T Consensus       222 ~d~~g~  227 (346)
T 3fbg_A          222 FCTFNT  227 (346)
T ss_dssp             EESSCH
T ss_pred             EECCCc
Confidence            998764

>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}

Probab=96.97  E-value=0.0058  Score=51.38  Aligned_cols=95  Identities=12%  Similarity=0.144  Sum_probs=54.4

Q ss_pred             CceEEEeCcchhhHHHHHH-HHHHCCC--CeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            9 EETVCVTGANGFIGTWLVK-TLLDNNY--TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~-~L~~~g~--~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      .++|-|.||||++|+.|++ .|.++.+  .++..+..+ .....+..+.+.   ...+  -|..+++    .++++|+||
T Consensus         4 ~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~-~aG~~~~~~~~~---~~~v--~~~~~~~----~~~~vDvvf   73 (377)
T 3uw3_A            4 SMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTS-NAGGKAPSFAKN---ETTL--KDATSID----DLKKCDVII   73 (377)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS-CTTSBCCTTCCS---CCBC--EETTCHH----HHHTCSEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEech-hcCCCHHHcCCC---ceEE--EeCCChh----HhcCCCEEE
Confidence            3689999999999999999 6666652  255555433 222222222211   1111  1333333    247899999


Q ss_pred             EecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCC-EEEEecc
Q 023689           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTSS  131 (278)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~-~~v~~Ss  131 (278)
                      -+.+...                  +..+...+.+.|.+ ++|-.|+
T Consensus        74 ~a~~~~~------------------s~~~~~~~~~~G~k~~VID~ss  102 (377)
T 3uw3_A           74 TCQGGDY------------------TNDVFPKLRAAGWNGYWIDAAS  102 (377)
T ss_dssp             ECSCHHH------------------HHHHHHHHHHTTCCSEEEECSS
T ss_pred             ECCChHH------------------HHHHHHHHHHCCCCEEEEeCCc
Confidence            8865311                  33455556667764 5666665

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=96.96  E-value=0.00079  Score=56.53  Aligned_cols=72  Identities=14%  Similarity=0.117  Sum_probs=50.9

Q ss_pred             ceEEEeCcchhhHHHH-HHHH-HHCCCCeEEEEecCCC---CCcccccCCCCCCCceEEEEccCCChh--hHHHHhcCcc
Q 023689           10 ETVCVTGANGFIGTWL-VKTL-LDNNYTSINATVFPGS---DSSHLFALPGAGDANLRVFEADVLDSG--AVSRAVEGCK   82 (278)
Q Consensus        10 ~~vlItGatG~iG~~l-~~~L-~~~g~~~v~~~~r~~~---~~~~~~~~~~~~~~~v~~~~~Dl~d~~--~~~~~~~~~d   82 (278)
                      .+|||+|+ |.+|... ++.+ ...|.+.|++++++++   +.+.++++      ++..+  |..+.+  .+.++-.++|
T Consensus       174 ~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~l------Ga~~v--~~~~~~~~~i~~~~gg~D  244 (357)
T 2b5w_A          174 SSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEEL------DATYV--DSRQTPVEDVPDVYEQMD  244 (357)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHT------TCEEE--ETTTSCGGGHHHHSCCEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHc------CCccc--CCCccCHHHHHHhCCCCC
Confidence            79999999 9999999 8877 7789844999998876   55555544      45544  554432  2444412689


Q ss_pred             EEEEeccc
Q 023689           83 GVFHVASP   90 (278)
Q Consensus        83 ~vi~~a~~   90 (278)
                      +||+++|.
T Consensus       245 vvid~~g~  252 (357)
T 2b5w_A          245 FIYEATGF  252 (357)
T ss_dssp             EEEECSCC
T ss_pred             EEEECCCC
Confidence            99999764

>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}

Probab=96.95  E-value=0.00035  Score=57.57  Aligned_cols=73  Identities=12%  Similarity=0.104  Sum_probs=45.7

Q ss_pred             ccccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCC--CCCcccccCCCCCCCceEEEEccCCChhhHHHHhc
Q 023689            2 ASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG--SDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE   79 (278)
Q Consensus         2 ~~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~--~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~   79 (278)
                      +.|+..+||+|.|+|. |.+|..+++.|.+.|+++|++.+|++  +..+.+...      ++..       .++..++++
T Consensus        17 ~~~~~~~~~~I~iIG~-G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~------g~~~-------~~~~~e~~~   82 (312)
T 3qsg_A           17 NLYFQSNAMKLGFIGF-GEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEEL------GVSC-------KASVAEVAG   82 (312)
T ss_dssp             --------CEEEEECC-SHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHT------TCEE-------CSCHHHHHH
T ss_pred             cccccCCCCEEEEECc-cHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHC------CCEE-------eCCHHHHHh
Confidence            3455566789999987 99999999999999976788888863  333322221      2221       124566777


Q ss_pred             CccEEEEec
Q 023689           80 GCKGVFHVA   88 (278)
Q Consensus        80 ~~d~vi~~a   88 (278)
                      ++|+||-+.
T Consensus        83 ~aDvVi~~v   91 (312)
T 3qsg_A           83 ECDVIFSLV   91 (312)
T ss_dssp             HCSEEEECS
T ss_pred             cCCEEEEec
Confidence            889888764

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.95  E-value=0.0014  Score=52.50  Aligned_cols=66  Identities=12%  Similarity=0.054  Sum_probs=48.7

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEec
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a   88 (278)
                      +++++|+|+ |+.|+.++..|.+.|. +|++..|+.++.+.+..+      ++...  ++.+   +    .++|+||++.
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~-~v~V~nRt~~ka~~la~~------~~~~~--~~~~---l----~~~DiVInaT  180 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGL-QVSVLNRSSRGLDFFQRL------GCDCF--MEPP---K----SAFDLIINAT  180 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSSCTTHHHHHHH------TCEEE--SSCC---S----SCCSEEEECC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHC------CCeEe--cHHH---h----ccCCEEEEcc
Confidence            689999997 9999999999999996 999999988776555422      22222  2222   1    2789999986


Q ss_pred             ccC
Q 023689           89 SPC   91 (278)
Q Consensus        89 ~~~   91 (278)
                      ...
T Consensus       181 p~G  183 (269)
T 3phh_A          181 SAS  183 (269)
T ss_dssp             TTC
T ss_pred             cCC
Confidence            543

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.95  E-value=0.0025  Score=51.14  Aligned_cols=58  Identities=14%  Similarity=0.186  Sum_probs=47.3

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      ++.+|+++|+|+++.+|+.++..|+..|+ .|+...++.                           ..+.+.++.+|+||
T Consensus       157 ~l~Gk~vvVvGrs~iVG~p~A~lL~~~gA-tVtv~h~~t---------------------------~~L~~~~~~ADIVI  208 (285)
T 3p2o_A          157 DLEGKDAVIIGASNIVGRPMATMLLNAGA-TVSVCHIKT---------------------------KDLSLYTRQADLII  208 (285)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTC---------------------------SCHHHHHTTCSEEE
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCc---------------------------hhHHHHhhcCCEEE
Confidence            45789999999999999999999999999 777664321                           23678889999999


Q ss_pred             EecccC
Q 023689           86 HVASPC   91 (278)
Q Consensus        86 ~~a~~~   91 (278)
                      ...+..
T Consensus       209 ~Avg~p  214 (285)
T 3p2o_A          209 VAAGCV  214 (285)
T ss_dssp             ECSSCT
T ss_pred             ECCCCC
Confidence            988753

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=96.94  E-value=0.0043  Score=52.00  Aligned_cols=65  Identities=11%  Similarity=0.091  Sum_probs=46.2

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCc---cEEE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGC---KGVF   85 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~---d~vi   85 (278)
                      +|+|.|+|. |.+|..+++.|.+.|+ .|.+.+|+++..+.+...      ++       ....++.++++.+   |+||
T Consensus        22 ~mkIgiIGl-G~mG~~~A~~L~~~G~-~V~v~dr~~~~~~~l~~~------g~-------~~~~s~~e~~~~a~~~DvVi   86 (358)
T 4e21_A           22 SMQIGMIGL-GRMGADMVRRLRKGGH-ECVVYDLNVNAVQALERE------GI-------AGARSIEEFCAKLVKPRVVW   86 (358)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTT------TC-------BCCSSHHHHHHHSCSSCEEE
T ss_pred             CCEEEEECc-hHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHC------CC-------EEeCCHHHHHhcCCCCCEEE
Confidence            479999985 9999999999999999 899998877654444321      11       1122345555544   9999


Q ss_pred             Eec
Q 023689           86 HVA   88 (278)
Q Consensus        86 ~~a   88 (278)
                      -+.
T Consensus        87 ~~v   89 (358)
T 4e21_A           87 LMV   89 (358)
T ss_dssp             ECS
T ss_pred             EeC
Confidence            774

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=96.92  E-value=0.00035  Score=56.79  Aligned_cols=65  Identities=15%  Similarity=0.241  Sum_probs=46.4

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEec
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a   88 (278)
                      ||+|.|+|. |.+|..+++.|.+.|+ +|++.+|+++..+.+...      ++.       -.++..++++++|+||-+.
T Consensus         1 M~~I~iiG~-G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~------g~~-------~~~~~~~~~~~advvi~~v   65 (287)
T 3pdu_A            1 MTTYGFLGL-GIMGGPMAANLVRAGF-DVTVWNRNPAKCAPLVAL------GAR-------QASSPAEVCAACDITIAML   65 (287)
T ss_dssp             CCCEEEECC-STTHHHHHHHHHHHTC-CEEEECSSGGGGHHHHHH------TCE-------ECSCHHHHHHHCSEEEECC
T ss_pred             CCeEEEEcc-CHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHC------CCe-------ecCCHHHHHHcCCEEEEEc
Confidence            478999975 9999999999999999 899999987765544321      111       1124556666777777664

>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}

Probab=96.92  E-value=0.00074  Score=56.92  Aligned_cols=32  Identities=25%  Similarity=0.283  Sum_probs=26.5

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINAT   40 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~   40 (278)
                      ++||.|.||||++|..|++.|.++.+.++..+
T Consensus        19 ~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l   50 (381)
T 3hsk_A           19 VKKAGVLGATGSVGQRFILLLSKHPEFEIHAL   50 (381)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCSSEEEEEE
T ss_pred             ccEEEEECCCChHHHHHHHHHHcCCCceEEEe
Confidence            46899999999999999998888765466544

>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}

Probab=96.90  E-value=0.00069  Score=59.27  Aligned_cols=48  Identities=13%  Similarity=0.231  Sum_probs=36.3

Q ss_pred             CccccccCCceEEEeCcchhhHHHHHHHHHHC--CCCeEEEEecCCCCCccc
Q 023689            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDN--NYTSINATVFPGSDSSHL   50 (278)
Q Consensus         1 m~~m~~~~~~~vlItGatG~iG~~l~~~L~~~--g~~~v~~~~r~~~~~~~~   50 (278)
                      |.++...+||+|.|.|. |++|..++..|.+.  |+ +|++++++++..+.+
T Consensus         1 m~~~~~~~~mkI~VIG~-G~vG~~~A~~La~~g~g~-~V~~~D~~~~~v~~l   50 (481)
T 2o3j_A            1 MTDQVFGKVSKVVCVGA-GYVGGPTCAMIAHKCPHI-TVTVVDMNTAKIAEW   50 (481)
T ss_dssp             --CCSSCCCCEEEEECC-STTHHHHHHHHHHHCTTS-EEEEECSCHHHHHHH
T ss_pred             CCCCCCCCCCEEEEECC-CHHHHHHHHHHHhcCCCC-EEEEEECCHHHHHHH
Confidence            44444445679999987 99999999999998  67 899998876654444

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=96.90  E-value=0.0032  Score=50.91  Aligned_cols=58  Identities=14%  Similarity=0.126  Sum_probs=47.2

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHH--HHhcCccE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVS--RAVEGCKG   83 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~--~~~~~~d~   83 (278)
                      ++.+|+++|.|+++-+|+.++..|+..|+ .|+...|+..                           .+.  +.++.+|+
T Consensus       162 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~~~~T~---------------------------~l~l~~~~~~ADI  213 (300)
T 4a26_A          162 EMAGKRAVVLGRSNIVGAPVAALLMKENA-TVTIVHSGTS---------------------------TEDMIDYLRTADI  213 (300)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTSC---------------------------HHHHHHHHHTCSE
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCCC---------------------------CchhhhhhccCCE
Confidence            45789999999999999999999999999 7776654221                           234  78899999


Q ss_pred             EEEecccC
Q 023689           84 VFHVASPC   91 (278)
Q Consensus        84 vi~~a~~~   91 (278)
                      ||...+..
T Consensus       214 VI~Avg~p  221 (300)
T 4a26_A          214 VIAAMGQP  221 (300)
T ss_dssp             EEECSCCT
T ss_pred             EEECCCCC
Confidence            99988753

>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}

Probab=96.90  E-value=0.0014  Score=51.78  Aligned_cols=34  Identities=9%  Similarity=0.082  Sum_probs=28.6

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEE-ecCC
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINAT-VFPG   44 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~-~r~~   44 (278)
                      |+||.|+|+ |.+|+.+++.+.+.+. ++++. +++.
T Consensus         3 MmkI~ViGa-GrMG~~i~~~l~~~~~-eLva~~d~~~   37 (243)
T 3qy9_A            3 SMKILLIGY-GAMNQRVARLAEEKGH-EIVGVIENTP   37 (243)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEECSSC
T ss_pred             ceEEEEECc-CHHHHHHHHHHHhCCC-EEEEEEecCc
Confidence            689999999 9999999999999888 77664 4443

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=96.89  E-value=0.00055  Score=55.31  Aligned_cols=71  Identities=14%  Similarity=0.128  Sum_probs=50.9

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      +++|+++|+|+ |.+|+.++..|.+.|+ .|.+..|+.++.+.+....     ++.     +.+  ++.+.++++|+||+
T Consensus       127 ~~~~~v~iiGa-G~~g~aia~~L~~~g~-~V~v~~r~~~~~~~l~~~~-----g~~-----~~~--~~~~~~~~aDiVi~  192 (275)
T 2hk9_A          127 VKEKSILVLGA-GGASRAVIYALVKEGA-KVFLWNRTKEKAIKLAQKF-----PLE-----VVN--SPEEVIDKVQVIVN  192 (275)
T ss_dssp             GGGSEEEEECC-SHHHHHHHHHHHHHTC-EEEEECSSHHHHHHHTTTS-----CEE-----ECS--CGGGTGGGCSEEEE
T ss_pred             cCCCEEEEECc-hHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHc-----CCe-----eeh--hHHhhhcCCCEEEE
Confidence            45789999997 8999999999999999 8998888765444333211     222     111  34556788999999


Q ss_pred             ecccC
Q 023689           87 VASPC   91 (278)
Q Consensus        87 ~a~~~   91 (278)
                      +....
T Consensus       193 atp~~  197 (275)
T 2hk9_A          193 TTSVG  197 (275)
T ss_dssp             CSSTT
T ss_pred             eCCCC
Confidence            87653

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=96.89  E-value=0.0018  Score=52.89  Aligned_cols=35  Identities=17%  Similarity=0.295  Sum_probs=31.2

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCC
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG   44 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   44 (278)
                      +++|.|+||+|.+|..++..|.+.|+ +|++.+|++
T Consensus        21 ~~~I~iIGg~G~mG~~la~~l~~~G~-~V~~~~~~~   55 (298)
T 2pv7_A           21 IHKIVIVGGYGKLGGLFARYLRASGY-PISILDRED   55 (298)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTTC-CEEEECTTC
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHhCCC-eEEEEECCc
Confidence            46899999889999999999999999 888887754

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=96.85  E-value=0.0007  Score=58.66  Aligned_cols=79  Identities=11%  Similarity=0.133  Sum_probs=50.6

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCC-CCCceE-EE-----EccCCChhhHHHHhcCcc
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGA-GDANLR-VF-----EADVLDSGAVSRAVEGCK   82 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~v~-~~-----~~Dl~d~~~~~~~~~~~d   82 (278)
                      |+|.|+|+ |++|..++..|.+.|+ +|++.+++++..+.+..-... ...++. .+     .+.+.-..++.++++++|
T Consensus         3 mkI~VIG~-G~vG~~lA~~La~~G~-~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aD   80 (450)
T 3gg2_A            3 LDIAVVGI-GYVGLVSATCFAELGA-NVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEAD   80 (450)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCC-EEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCC
Confidence            68999987 9999999999999999 999999987654444321000 000000 00     011211234667788999


Q ss_pred             EEEEeccc
Q 023689           83 GVFHVASP   90 (278)
Q Consensus        83 ~vi~~a~~   90 (278)
                      +||-+...
T Consensus        81 vViiaVpt   88 (450)
T 3gg2_A           81 IIFIAVGT   88 (450)
T ss_dssp             EEEECCCC
T ss_pred             EEEEEcCC
Confidence            99988654

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=96.85  E-value=0.00042  Score=56.95  Aligned_cols=67  Identities=21%  Similarity=0.201  Sum_probs=47.6

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      ..+|+|.|+|. |.+|..+++.|.+.|+ +|++.+|+++..+.+...      ++.       -.++..++++++|+||-
T Consensus         7 ~~~~~IgiIG~-G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~~~~~------g~~-------~~~~~~e~~~~aDvVi~   71 (306)
T 3l6d_A            7 SFEFDVSVIGL-GAMGTIMAQVLLKQGK-RVAIWNRSPGKAAALVAA------GAH-------LCESVKAALSASPATIF   71 (306)
T ss_dssp             CCSCSEEEECC-SHHHHHHHHHHHHTTC-CEEEECSSHHHHHHHHHH------TCE-------ECSSHHHHHHHSSEEEE
T ss_pred             cCCCeEEEECC-CHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHC------CCe-------ecCCHHHHHhcCCEEEE
Confidence            34678999976 9999999999999999 899998877654443321      111       12345666677788876


Q ss_pred             ec
Q 023689           87 VA   88 (278)
Q Consensus        87 ~a   88 (278)
                      +.
T Consensus        72 ~v   73 (306)
T 3l6d_A           72 VL   73 (306)
T ss_dssp             CC
T ss_pred             Ee
Confidence            64

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.82  E-value=0.0009  Score=54.37  Aligned_cols=64  Identities=20%  Similarity=0.310  Sum_probs=47.0

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEec
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a   88 (278)
                      |+|.|+|. |.+|+.+++.|.+.|+ +|++.+|+++..+.+...      ++.       -.+++.++++++|+||-+.
T Consensus         2 ~~i~iIG~-G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~------g~~-------~~~~~~~~~~~aDvvi~~v   65 (287)
T 3pef_A            2 QKFGFIGL-GIMGSAMAKNLVKAGC-SVTIWNRSPEKAEELAAL------GAE-------RAATPCEVVESCPVTFAML   65 (287)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSSGGGGHHHHHT------TCE-------ECSSHHHHHHHCSEEEECC
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHC------CCe-------ecCCHHHHHhcCCEEEEEc
Confidence            68999986 9999999999999999 899999987765554332      221       1234566667778887664

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=96.82  E-value=0.00085  Score=56.40  Aligned_cols=74  Identities=15%  Similarity=0.077  Sum_probs=52.1

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHC-CCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCCh--hhHHHHhc--Ccc
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS--GAVSRAVE--GCK   82 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~-g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~--~~~~~~~~--~~d   82 (278)
                      .+.+|||+|+ |.+|...++.+... |+ .|+++++++++.+.++++      +...+ .|..+.  +.+.++..  ++|
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga-~Vi~~~~~~~~~~~~~~l------Ga~~v-i~~~~~~~~~v~~~~~g~g~D  256 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPA-TVIALDVKEEKLKLAERL------GADHV-VDARRDPVKQVMELTRGRGVN  256 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCC-EEEEEESSHHHHHHHHHT------TCSEE-EETTSCHHHHHHHHTTTCCEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCC-eEEEEeCCHHHHHHHHHh------CCCEE-EeccchHHHHHHHHhCCCCCc
Confidence            4679999999 89999999988888 99 899999877665555544      22111 244443  34444443  689


Q ss_pred             EEEEeccc
Q 023689           83 GVFHVASP   90 (278)
Q Consensus        83 ~vi~~a~~   90 (278)
                      +||.++|.
T Consensus       257 vvid~~G~  264 (359)
T 1h2b_A          257 VAMDFVGS  264 (359)
T ss_dssp             EEEESSCC
T ss_pred             EEEECCCC
Confidence            99999764

>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}

Probab=96.81  E-value=0.0016  Score=53.00  Aligned_cols=65  Identities=15%  Similarity=0.255  Sum_probs=44.7

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEe
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~   87 (278)
                      +||+|.|+|+ |.+|+.+++.|.+.|+ +|++.+ +++..+.+...      +       +.-..+..++++++|+||-+
T Consensus         2 ~~m~i~iiG~-G~~G~~~a~~l~~~g~-~V~~~~-~~~~~~~~~~~------g-------~~~~~~~~~~~~~~D~vi~~   65 (295)
T 1yb4_A            2 NAMKLGFIGL-GIMGSPMAINLARAGH-QLHVTT-IGPVADELLSL------G-------AVNVETARQVTEFADIIFIM   65 (295)
T ss_dssp             --CEEEECCC-STTHHHHHHHHHHTTC-EEEECC-SSCCCHHHHTT------T-------CBCCSSHHHHHHTCSEEEEC
T ss_pred             CCCEEEEEcc-CHHHHHHHHHHHhCCC-EEEEEc-CHHHHHHHHHc------C-------CcccCCHHHHHhcCCEEEEE
Confidence            3579999985 9999999999999998 888777 65554443321      1       11123455667788888877


Q ss_pred             c
Q 023689           88 A   88 (278)
Q Consensus        88 a   88 (278)
                      .
T Consensus        66 v   66 (295)
T 1yb4_A           66 V   66 (295)
T ss_dssp             C
T ss_pred             C
Confidence            5

>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*

Probab=96.80  E-value=0.0043  Score=55.44  Aligned_cols=67  Identities=16%  Similarity=0.133  Sum_probs=56.7

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHH-hcCccEEEEec
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFHVA   88 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~-~~~~d~vi~~a   88 (278)
                      ++++|.|+ |-+|+++++.|.+.|+ .|+++..+++..+..         . ..+.+|.+|++.++++ ++++|.+|-+.
T Consensus       349 ~~viIiG~-G~~G~~la~~L~~~g~-~v~vid~d~~~~~~~---------~-~~i~gD~t~~~~L~~agi~~ad~vi~~~  416 (565)
T 4gx0_A          349 ELIFIIGH-GRIGCAAAAFLDRKPV-PFILIDRQESPVCND---------H-VVVYGDATVGQTLRQAGIDRASGIIVTT  416 (565)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTC-CEEEEESSCCSSCCS---------S-CEEESCSSSSTHHHHHTTTSCSEEEECC
T ss_pred             CCEEEECC-CHHHHHHHHHHHHCCC-CEEEEECChHHHhhc---------C-CEEEeCCCCHHHHHhcCccccCEEEEEC
Confidence            68999998 9999999999999999 899999888765442         2 6889999999988886 67899988653

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=96.80  E-value=0.0022  Score=53.68  Aligned_cols=74  Identities=15%  Similarity=-0.018  Sum_probs=51.0

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCC----hhhHHHHh-----
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD----SGAVSRAV-----   78 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d----~~~~~~~~-----   78 (278)
                      .+.+|||+|+ |.+|...++.+...|+ .|+++++++++.+.++.+..    . ..  .|..+    .+.+.+..     
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa----~-~~--~~~~~~~~~~~~i~~~~~~~~g  238 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGA----D-VT--LVVDPAKEEESSIIERIRSAIG  238 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTC----S-EE--EECCTTTSCHHHHHHHHHHHSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCC----C-EE--EcCcccccHHHHHHHHhccccC
Confidence            4679999997 9999999998888999 68888887665555444311    2 12  23332    23455544     


Q ss_pred             cCccEEEEeccc
Q 023689           79 EGCKGVFHVASP   90 (278)
Q Consensus        79 ~~~d~vi~~a~~   90 (278)
                      .++|+||++++.
T Consensus       239 ~g~D~vid~~g~  250 (352)
T 1e3j_A          239 DLPNVTIDCSGN  250 (352)
T ss_dssp             SCCSEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            369999999764

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=96.80  E-value=0.0015  Score=54.95  Aligned_cols=78  Identities=10%  Similarity=0.065  Sum_probs=52.5

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHh----c--Cc
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAV----E--GC   81 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~----~--~~   81 (278)
                      .+.+|||+|+ |.+|...++.+...|.+.|+++++++++.+..+++ ..   .+..+..|-.+.+.+.+.+    .  ++
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~---~~~~~~~~~~~~~~~~~~v~~~t~g~g~  253 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CP---EVVTHKVERLSAEESAKKIVESFGGIEP  253 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CT---TCEEEECCSCCHHHHHHHHHHHTSSCCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-ch---hcccccccccchHHHHHHHHHHhCCCCC
Confidence            4679999998 99999999999889994488888877665555444 21   2333334433333333332    2  68


Q ss_pred             cEEEEeccc
Q 023689           82 KGVFHVASP   90 (278)
Q Consensus        82 d~vi~~a~~   90 (278)
                      |+||.++|.
T Consensus       254 Dvvid~~g~  262 (363)
T 3m6i_A          254 AVALECTGV  262 (363)
T ss_dssp             SEEEECSCC
T ss_pred             CEEEECCCC
Confidence            999998764

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=96.79  E-value=0.003  Score=51.91  Aligned_cols=67  Identities=12%  Similarity=0.238  Sum_probs=51.3

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      ++.+|++.|.|. |-||+.+++.|...|+ +|++.+|++...+           .+...    ...+++.++++.+|+|+
T Consensus       136 ~l~g~tvGIiG~-G~IG~~vA~~l~~~G~-~V~~~dr~~~~~~-----------~~~~~----~~~~~l~ell~~aDiV~  198 (315)
T 3pp8_A          136 TREEFSVGIMGA-GVLGAKVAESLQAWGF-PLRCWSRSRKSWP-----------GVESY----VGREELRAFLNQTRVLI  198 (315)
T ss_dssp             CSTTCCEEEECC-SHHHHHHHHHHHTTTC-CEEEEESSCCCCT-----------TCEEE----ESHHHHHHHHHTCSEEE
T ss_pred             CcCCCEEEEEee-CHHHHHHHHHHHHCCC-EEEEEcCCchhhh-----------hhhhh----cccCCHHHHHhhCCEEE
Confidence            456899999987 9999999999999999 8999988765322           22111    12367889999999998


Q ss_pred             Eecc
Q 023689           86 HVAS   89 (278)
Q Consensus        86 ~~a~   89 (278)
                      .+..
T Consensus       199 l~~P  202 (315)
T 3pp8_A          199 NLLP  202 (315)
T ss_dssp             ECCC
T ss_pred             EecC
Confidence            7653

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*

Probab=96.79  E-value=0.0028  Score=52.21  Aligned_cols=115  Identities=13%  Similarity=0.059  Sum_probs=69.6

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCC-CeEEEEecCCCCCc--cc--ccCCCCCCCceEEEEccCCChhhHHHHhcC
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSS--HL--FALPGAGDANLRVFEADVLDSGAVSRAVEG   80 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~--~~--~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~   80 (278)
                      +.++|||.|+|+ |.+|..++..|.+.|+ .+|.+++++++..+  ..  ........ ...+...  .+.    +.+++
T Consensus         4 ~~~~mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~-~~~v~~~--~~~----~~~~~   75 (319)
T 1lld_A            4 TVKPTKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYP-TVSIDGS--DDP----EICRD   75 (319)
T ss_dssp             ---CCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGST-TCEEEEE--SCG----GGGTT
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcC-CeEEEeC--CCH----HHhCC
Confidence            345679999998 9999999999999886 36888887653322  11  11000000 1111111  122    34678


Q ss_pred             ccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEec
Q 023689           81 CKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS  130 (278)
Q Consensus        81 ~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~S  130 (278)
                      +|+||-+++.....  .......+..|......+++.+++.+...+|...
T Consensus        76 aD~Vii~v~~~~~~--g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~~  123 (319)
T 1lld_A           76 ADMVVITAGPRQKP--GQSRLELVGATVNILKAIMPNLVKVAPNAIYMLI  123 (319)
T ss_dssp             CSEEEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEEC
T ss_pred             CCEEEECCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEe
Confidence            99999988654322  2345677888888888888888766444444433

>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}

Probab=96.79  E-value=0.004  Score=51.33  Aligned_cols=67  Identities=13%  Similarity=0.172  Sum_probs=51.3

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      ++.+|++.|.|- |-||+.+++.|...|+ +|++.+|++.......        ..       ....++.++++.+|+|+
T Consensus       137 ~l~g~tvGIIGl-G~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~~~--------~~-------~~~~~l~ell~~aDvV~  199 (324)
T 3hg7_A          137 GLKGRTLLILGT-GSIGQHIAHTGKHFGM-KVLGVSRSGRERAGFD--------QV-------YQLPALNKMLAQADVIV  199 (324)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSSCCCCTTCS--------EE-------ECGGGHHHHHHTCSEEE
T ss_pred             ccccceEEEEEE-CHHHHHHHHHHHhCCC-EEEEEcCChHHhhhhh--------cc-------cccCCHHHHHhhCCEEE
Confidence            567899999987 9999999999999999 8999988764322110        11       12467889999999998


Q ss_pred             Eecc
Q 023689           86 HVAS   89 (278)
Q Consensus        86 ~~a~   89 (278)
                      .+..
T Consensus       200 l~lP  203 (324)
T 3hg7_A          200 SVLP  203 (324)
T ss_dssp             ECCC
T ss_pred             EeCC
Confidence            7754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	278
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	7e-30
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	2e-28
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	1e-27
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	6e-27
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	1e-25
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	1e-21
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	2e-20
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	3e-19
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	8e-19
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	1e-16
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	1e-16
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	4e-14
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	9e-14
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	2e-13
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	2e-13
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	4e-12
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	8e-12
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	7e-11
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	2e-10
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	6e-09
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	7e-09
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	4e-08
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	6e-07
d2blla1	342	c.2.1.2 (A:316-657) Polymyxin resistance protein A	1e-06
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	2e-06
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	6e-06
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	6e-06
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	9e-06
d1eq2a_	307	c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimer	1e-05
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	1e-05
d2a35a1	212	c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse	2e-05
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	4e-05
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	4e-05
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	5e-05
d1n2sa_	298	c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct	6e-05
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	6e-05
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	6e-05
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	8e-05
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	9e-05
d1vl0a_	281	c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD	1e-04
d2bkaa1	232	c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H	1e-04
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	1e-04
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	2e-04
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	6e-04
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	6e-04
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	7e-04
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	8e-04
d1gy8a_	383	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	0.001
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	0.001
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	0.001
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	0.002
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	0.003
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	0.004

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  112 bits (281), Expect = 7e-30
 Identities = 57/267 (21%), Positives = 101/267 (37%), Gaps = 22/267 (8%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           + +TG  GF+G+ L   L+ + +       F      ++      G  N  +   DV++ 
Sbjct: 4   ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHW--IGHENFELINHDVVE- 60

Query: 72  GAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS 131
                       ++H+ASP +  + +    + +     GTLN+L  AKR G  R+++ S+
Sbjct: 61  ----PLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLAST 115

Query: 132 ISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHP 191
            S +  +P  +     E  W  +     R   Y   K +AE   + + ++ GV+V     
Sbjct: 116 -SEVYGDP--EVHPQSEDYWGHVNPIGPR-ACYDEGKRVAETMCYAYMKQEGVEVRVARI 171

Query: 192 ATCLGPLMQP-YLNASCAVLQQLLQGSK------DTQEYHWLGAVPVKDVAKAQVLLFES 244
               GP M           + Q LQG         +Q   +     V D+    V L  S
Sbjct: 172 FNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQ---YVSDLVNGLVALMNS 228

Query: 245 PAASGRYLCTNGIYQFGDFAERVSKLF 271
             +S   L     +   +FA+ +  L 
Sbjct: 229 NVSSPVNLGNPEEHTILEFAQLIKNLV 255

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score =  109 bits (273), Expect = 2e-28
 Identities = 45/277 (16%), Positives = 92/277 (33%), Gaps = 26/277 (9%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSIN----ATVFPGSDSSHLFALPGAGDANLRVFEA 66
              +TG  G  G++L + LL+  Y        A+ F      H++  P   +    +   
Sbjct: 3   VALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYG 62

Query: 67  DVLDSGAVSRAVEGCK--GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR 124
           D+ D+  ++R +   +   V+++ +   +    +  +        GTL +LEA +  G+ 
Sbjct: 63  DLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLE 122

Query: 125 ---RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK 181
              R    S+ S +            ET+             Y V+K  A      + E 
Sbjct: 123 KKTRFYQAST-SELYGLVQEIP--QKETTPFYPRSP------YAVAKLYAYWITVNYRES 173

Query: 182 HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG-------AVPVKDV 234
           +G+            P  +     +  + + +   ++  +   +LG           KD 
Sbjct: 174 YGMYACNGILFNHESPR-RGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDY 232

Query: 235 AKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLF 271
            K Q ++ +        + T   Y    F E  +   
Sbjct: 233 VKMQWMMLQQEQPEDFVIATGVQYSVRQFVEMAAAQL 269

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score =  107 bits (267), Expect = 1e-27
 Identities = 48/264 (18%), Positives = 93/264 (35%), Gaps = 24/264 (9%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPG-AGDANLRVFEADVLD 70
           + +TG  GFIG+ +V+ ++ N   ++   +   + + +L +L   +         AD+ D
Sbjct: 3   ILITGGAGFIGSAVVRHIIKNTQDTV-VNIDKLTYAGNLESLSDISESNRYNFEHADICD 61

Query: 71  SGAVSRAVEGCK--GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV----- 123
           S  ++R  E  +   V H+A+   ++  +      I   + GT  +LE A+++       
Sbjct: 62  SAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGED 121

Query: 124 ----RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW-YPVSKTLAEKAAWEF 178
                R    S+       P         T     E         Y  SK  ++     +
Sbjct: 122 KKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAW 181

Query: 179 AEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSK------DTQEYHWLGAVPVK 232
              +G+  +  + +   GP   P       V+   L+G          Q   W   + V+
Sbjct: 182 RRTYGLPTIVTNCSNNYGPYHFPE-KLIPLVILNALEGKPLPIYGKGDQIRDW---LYVE 237

Query: 233 DVAKAQVLLFESPAASGRYLCTNG 256
           D A+A  ++     A   Y     
Sbjct: 238 DHARALHMVVTEGKAGETYNIGGH 261

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score =  104 bits (261), Expect = 6e-27
 Identities = 57/251 (22%), Positives = 86/251 (34%), Gaps = 24/251 (9%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-----SSHLFALPGAGDANLRVFEA 66
           + VTG  GFIG+  V+ LL   Y  + A      D      +     P   D  LR    
Sbjct: 3   LLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHG 62

Query: 67  DVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRV 126
           D+ D+G ++R + G   + H A+   ++  +          VQGT  +L+ A   GV RV
Sbjct: 63  DIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRV 122

Query: 127 VVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDV 186
           V  S+              + E+S  +          Y  SK  ++  A  +   +G+DV
Sbjct: 123 VHVSTNQVYGSIDSGS---WTESSPLEPNSP------YAASKAGSDLVARAYHRTYGLDV 173

Query: 187 VAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT------QEYHWLGAVPVKDVAKAQVL 240
                    GP   P        +  LL G              W   V   D  +   L
Sbjct: 174 RITRCCNNYGPYQHPE-KLIPLFVTNLLDGGTLPLYGDGANVREW---VHTDDHCRGIAL 229

Query: 241 LFESPAASGRY 251
           +     A   Y
Sbjct: 230 VLAGGRAGEIY 240

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score =  101 bits (252), Expect = 1e-25
 Identities = 70/297 (23%), Positives = 112/297 (37%), Gaps = 25/297 (8%)

Query: 1   MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAG--D 58
           + +    E   V VTGANGF+ + +V+ LL++ Y  +  T    S  ++L     A    
Sbjct: 3   IDNAVLPEGSLVLVTGANGFVASHVVEQLLEHGYK-VRGTARSASKLANLQKRWDAKYPG 61

Query: 59  ANLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAA 118
                   D+L  GA    ++G  GV H+AS  +  +  D       PA+ GTLN L AA
Sbjct: 62  RFETAVVEDMLKQGAYDEVIKGAAGVAHIASVVSFSNKYDEVVT---PAIGGTLNALRAA 118

Query: 119 -KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYP-----------V 166
                V+R V+TSS  + +        ++ +    +LE     K                
Sbjct: 119 AATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAA 178

Query: 167 SKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQPYLNA--SCAVLQQLLQGSKDTQE 222
           SKT AE AAW+F +++     + A+ P   +G +  P   +  +   +  L  G      
Sbjct: 179 SKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPAL 238

Query: 223 --YHWLGAVPVKDVAKAQVLLFESPAASGRY-LCTNGIYQFGDFAERVSKLFPEFPV 276
                   V   D+    +     P    R    T G + +        KL+P    
Sbjct: 239 ALMPPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKTF 295

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 89.9 bits (222), Expect = 1e-21
 Identities = 34/199 (17%), Positives = 65/199 (32%), Gaps = 28/199 (14%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           V + G  G +G+ + + L       +         +                 E ++LDS
Sbjct: 5   VFIAGHRGMVGSAIRRQLEQRGDVEL------VLRTRD---------------ELNLLDS 43

Query: 72  GAVSRAVEGCK--GVFHVASPCT-LEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVV 128
            AV       +   V+  A+    +        + I   +    N++ AA +  V +++ 
Sbjct: 44  RAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLF 103

Query: 129 TSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVA 188
             S S I P    +     E     LE        Y ++K    K    +  ++G D  +
Sbjct: 104 LGS-SCIYPKLAKQPMAESELLQGTLEPTNE---PYAIAKIAGIKLCESYNRQYGRDYRS 159

Query: 189 IHPATCLGPLMQPYLNASC 207
           + P    GP    + + S 
Sbjct: 160 VMPTNLYGPHDNFHPSNSH 178

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.3 bits (215), Expect = 2e-20
 Identities = 47/266 (17%), Positives = 92/266 (34%), Gaps = 25/266 (9%)

Query: 14  VTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS----SHLFALPGAG-DANLRVFEADV 68
           +TG  G  G++L + LL+  Y          S +     HL+  P A  + N+++   D+
Sbjct: 6   ITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDL 65

Query: 69  LDSGAVSRAVEGCKG--VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRV 126
            DS  + + +   K   ++++ +   ++   D  +        GTL +L+A K  G+   
Sbjct: 66  TDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINS 125

Query: 127 V--VTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGV 184
           V    +S S +            ET+             Y  +K  A      F E + +
Sbjct: 126 VKFYQASTSELYGKVQEIP--QKETTPFYPRSP------YGAAKLYAYWIVVNFREAYNL 177

Query: 185 DVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG-------AVPVKDVAKA 237
             V         P        +  + + + +      E   LG           KD  +A
Sbjct: 178 FAVNGILFNHESPRRGANF-VTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEA 236

Query: 238 QVLLFESPAASGRYLCTNGIYQFGDF 263
             L+ ++       + T  ++   +F
Sbjct: 237 MWLMLQNDEPEDFVIATGEVHSVREF 262

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 83.5 bits (205), Expect = 3e-19
 Identities = 36/188 (19%), Positives = 62/188 (32%), Gaps = 9/188 (4%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           V VTG +G+IG+     LL N +  I       S  S L  +   G  +    E D+ + 
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNE 62

Query: 72  GAVSRAVEGCK--GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVT 129
             ++  +       V H A    + + V    E     V GTL ++ A +   V+  + +
Sbjct: 63  ALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFS 122

Query: 130 SSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAI 189
           SS +     P         T      Y KS+     +              +    +  +
Sbjct: 123 SSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILT-------DLQKAQPDWSIALL 175

Query: 190 HPATCLGP 197
                +G 
Sbjct: 176 RYFNPVGA 183

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 82.7 bits (203), Expect = 8e-19
 Identities = 39/267 (14%), Positives = 84/267 (31%), Gaps = 17/267 (6%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           + +TGA GFI + + + L    +  I +        +                  D+   
Sbjct: 18  ISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDM-------FCDEFHLVDLRVM 70

Query: 72  GAVSRAVEGCKGVFHVASPCTLEDPVDPEKELIL-PAVQGTLNVLEAAKRFGVRRVVVTS 130
               +  EG   VF++A+       +     +I+      + N++EAA+  G++R    S
Sbjct: 71  ENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYAS 130

Query: 131 SISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIH 190
           S + I P              +D    + +   + + K   E+    + +  G++     
Sbjct: 131 S-ACIYPEFKQLETTNVSLKESDAWPAEPQ-DAFGLEKLATEELCKHYNKDFGIECRIGR 188

Query: 191 PATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA-------VPVKDVAKAQVLLFE 243
                GP          A      +    T  +   G          + +  +  + L +
Sbjct: 189 FHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTK 248

Query: 244 SPAASGRYLCTNGIYQFGDFAERVSKL 270
           S       + ++ +    + AE V   
Sbjct: 249 SDFREPVNIGSDEMVSMNEMAEMVLSF 275

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 76.6 bits (187), Expect = 1e-16
 Identities = 32/196 (16%), Positives = 64/196 (32%), Gaps = 8/196 (4%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            + VTG  GFIG+  V  + +N+       +   + + +   L       + +   D+ D
Sbjct: 4   NIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIAD 63

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEA-----AKRFGVRR 125
           +  V +       + H A+    ++ ++     I     GT  +LEA      +   V  
Sbjct: 64  AELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVST 123

Query: 126 VVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVD 185
             V   +      PG      ++ +        S    Y  +K  ++     +    GV 
Sbjct: 124 DEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSS---PYSSTKAASDLIVKAWVRSFGVK 180

Query: 186 VVAIHPATCLGPLMQP 201
               + +   GP    
Sbjct: 181 ATISNCSNNYGPYQHI 196

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 76.2 bits (186), Expect = 1e-16
 Identities = 46/257 (17%), Positives = 87/257 (33%), Gaps = 19/257 (7%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
           +  VTG  G  G +L K LL+  Y          SD+       G  + +++  + D+ D
Sbjct: 2   SALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG-IEGDIQYEDGDMAD 60

Query: 71  SGAVSRAVEGCKG--VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVV 128
           + +V RAV   +   V+++A+   +    +      +    G  ++LEA ++F       
Sbjct: 61  ACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFY 120

Query: 129 TSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVA 188
            +S S +        +  DE +          +  Y V+K         + E  G+   +
Sbjct: 121 QASTSEMFGLIQA--ERQDENTPFY------PRSPYGVAKLYGHWITVNYRESFGLHASS 172

Query: 189 IHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA-------VPVKDVAKAQVLL 241
                   PL       +  V   + +     Q+   LG            D  +A  L+
Sbjct: 173 GILFNHESPLRGIE-FVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLM 231

Query: 242 FESPAASGRYLCTNGIY 258
            +   A    + T    
Sbjct: 232 LQQDKADDYVVATGVTT 248

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 69.4 bits (168), Expect = 4e-14
 Identities = 39/197 (19%), Positives = 73/197 (37%), Gaps = 13/197 (6%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVF-PGSDSSHLFALPGAGDANLRVFEADVLD 70
           + +TG  GF+G+ L    L      I          + +L  L   G  N      D+ +
Sbjct: 3   LLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLG--NFEFVHGDIRN 60

Query: 71  SGAVSRAVEGCK--GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVV 128
              V+R +        FH+A    +   +D         V GTLN+LEA +++     ++
Sbjct: 61  KNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNII 120

Query: 129 TSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYP--------VSKTLAEKAAWEFAE 180
            SS + +  +         ET +T ++      +            SK  A++   ++A 
Sbjct: 121 YSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYAR 180

Query: 181 KHGVDVVAIHPATCLGP 197
             G++ V    ++  G 
Sbjct: 181 IFGLNTVVFRHSSMYGG 197

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 68.2 bits (165), Expect = 9e-14
 Identities = 32/199 (16%), Positives = 64/199 (32%), Gaps = 14/199 (7%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSIN----ATVFPGSDSSHLFALP-GAGDANLRVFE 65
              +TG  G  G++L + LL   Y        ++ F     +H++  P     A +++  
Sbjct: 3   IALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHY 62

Query: 66  ADVLDSGAVSRAVEGCKG--VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV 123
           AD+ D+ ++ R ++  K   V+++A+   +    +           G L +LEA +   +
Sbjct: 63  ADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTI 122

Query: 124 RRVVVTSSISAIVPNPG-WKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH 182
                     A              ET+        +  K        A      + E +
Sbjct: 123 DSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCA------AHWYTVNYREAY 176

Query: 183 GVDVVAIHPATCLGPLMQP 201
           G+            P    
Sbjct: 177 GLFACNGILFNHESPRRGE 195

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 67.3 bits (163), Expect = 2e-13
 Identities = 50/279 (17%), Positives = 88/279 (31%), Gaps = 22/279 (7%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL----PGAGDANLRVFEA 66
              +TG  GFIG+ L++TLL  +   +    F      +L  +         +N +  + 
Sbjct: 18  VWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQG 77

Query: 67  DVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRV 126
           D+ +    + A  G   V H A+  ++   ++         + G LN+L AA+   V+  
Sbjct: 78  DIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSF 137

Query: 127 VVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDV 186
              +S S    +PG       E +             Y V+K + E  A  F+  +G   
Sbjct: 138 TYAASSSTYGDHPGLP---KVEDTIGKPLSP------YAVTKYVNELYADVFSRCYGFST 188

Query: 187 VAIHPATCLGPLMQP---YLNASCAVLQQLLQGSK-----DTQEYHWLGAVPVKDVAKAQ 238
           + +      G    P   Y          ++QG       D +       +     A   
Sbjct: 189 IGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLL 248

Query: 239 VLLFESPAASGRYLCTNG-IYQFGDFAERVSKLFPEFPV 276
                  A +  Y    G           +     E  V
Sbjct: 249 AATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGV 287

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 67.0 bits (162), Expect = 2e-13
 Identities = 41/217 (18%), Positives = 79/217 (36%), Gaps = 7/217 (3%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            V VTG  G+IG+  V  L++N Y  + A     S    +  L      ++  +E D+ D
Sbjct: 3   IVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCD 62

Query: 71  SGAVSRAVEGCK--GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVV 128
              + +  +  K   V H A    + +            + GT+ +LE  +++ V + V 
Sbjct: 63  RKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVF 122

Query: 129 TSSISAIVPNPGWKGKV-FDETSWTDLEYCKSRKK----WYPVSKTLAEKAAWEFAEKHG 183
           +SS +       +   +   E             K            ++K +W+FA    
Sbjct: 123 SSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSDKKSWKFAILRY 182

Query: 184 VDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT 220
            + +  HP+  +G       N     + Q+  G ++ 
Sbjct: 183 FNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREK 219

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 63.1 bits (152), Expect = 4e-12
 Identities = 36/266 (13%), Positives = 71/266 (26%), Gaps = 37/266 (13%)

Query: 7   KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEA 66
           ++++T+ V GA G  G  L++      +  + A V        L A       N+ +F+ 
Sbjct: 1   QQKKTIAVVGATGRQGASLIRVAAAVGHH-VRAQVH---SLKGLIAEELQAIPNVTLFQG 56

Query: 67  DVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRV 126
            +L++  +   +     +  + +     D            +    ++ +AAKR G  + 
Sbjct: 57  PLLNNVPLMDTLFEGAHLAFINTTSQAGDE-----------IAIGKDLADAAKRAGTIQH 105

Query: 127 VVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDV 186
            + SS+        W         +T   Y +                           V
Sbjct: 106 YIYSSMPDHSLYGPWPAVPMWAPKFTVENYVRQLG-------------------LPSTFV 146

Query: 187 VAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA 246
            A         L  P               +    +          DV  A + +F+   
Sbjct: 147 YAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGP 206

Query: 247 ASG---RYLCTNGIYQFGDFAERVSK 269
                 R   T             S+
Sbjct: 207 QKWNGHRIALTFETLSPVQVCAAFSR 232

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 62.1 bits (149), Expect = 8e-12
 Identities = 28/268 (10%), Positives = 64/268 (23%), Gaps = 34/268 (12%)

Query: 7   KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFP-GSDSSHLFALPGAGDANLRVFE 65
            ++  V + G  G+IG  +V   +   + +         S+   +  L        ++ E
Sbjct: 1   DKKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIE 60

Query: 66  ADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRR 125
           A + D   +  A++    V    +   L   +              L ++EA K  G  +
Sbjct: 61  ASLDDHQRLVDALKQVDVVISALAGGVLSHHIL-----------EQLKLVEAIKEAGNIK 109

Query: 126 VVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVD 185
             + S                                       + ++      E   + 
Sbjct: 110 RFLPSEFGMDPDIMEH-------------------ALQPGSITFIDKRKVRRAIEAASIP 150

Query: 186 VVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP 245
              +      G            ++    +             V   DV    +   + P
Sbjct: 151 YTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDP 210

Query: 246 AASGR---YLCTNGIYQFGDFAERVSKL 270
               +         I    +  +   +L
Sbjct: 211 QTLNKTMYIRPPMNILSQKEVIQIWERL 238

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 59.1 bits (141), Expect = 7e-11
 Identities = 42/271 (15%), Positives = 73/271 (26%), Gaps = 30/271 (11%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYT-SINATVFPGSDSSHLFALPGAGDANLRVFEADVL 69
           TV VTGA+G  G  + K L + +        V        +            VF  D+ 
Sbjct: 5   TVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-------GGEADVFIGDIT 57

Query: 70  DSGAVSRAVEGCKGVFHVASPCTLEDPV-DPEKELILPAVQGTLNVLEAAKRFGVRRVVV 128
           D+ +++ A +G   +  + S      P  DP K      +       E     G +  + 
Sbjct: 58  DADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQID 117

Query: 129 TSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVA 188
            + ++ +                   +        +        + A ++    G     
Sbjct: 118 AAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWK-------RKAEQYLADSGTPYTI 170

Query: 189 IHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAAS 248
           I     L                +LL G  D         VP  DVA+  +       A 
Sbjct: 171 IRAGGLLDKEGGVR---------ELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAK 221

Query: 249 GRYL-----CTNGIYQFGDFAERVSKLFPEF 274
            +                DF    S++   F
Sbjct: 222 NKAFDLGSKPEGTSTPTKDFKALFSQVTSRF 252

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.0 bits (136), Expect = 2e-10
 Identities = 35/248 (14%), Positives = 62/248 (25%), Gaps = 47/248 (18%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            + + GA G  G   +   +   Y  +   V   S                 V   DVL 
Sbjct: 5   KIAIFGATGQTGLTTLAQAVQAGYE-VTVLVRDSSRLPSEG------PRPAHVVVGDVLQ 57

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
           +  V + V G   V  +            +        +G  N++ A K  GV +VV  +
Sbjct: 58  AADVDKTVAGQDAVIVLLGT-------RNDLSPTTVMSEGARNIVAAMKAHGVDKVVACT 110

Query: 131 SISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIH 190
           S   +                               + T       +   + G+  VA+ 
Sbjct: 111 SAFLLWDPTKV--------------------PPRLQAVTDDHIRMHKVLRESGLKYVAVM 150

Query: 191 PATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGR 250
           P      +    L  +  V       S           +   D+    +    +    G 
Sbjct: 151 P----PHIGDQPLTGAYTVTLDGRGPS---------RVISKHDLGHFMLRCLTTDEYDGH 197

Query: 251 YLCTNGIY 258
               +  Y
Sbjct: 198 STYPSHQY 205

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 53.6 bits (127), Expect = 6e-09
 Identities = 32/264 (12%), Positives = 66/264 (25%), Gaps = 41/264 (15%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFP--GSDSSHLFALPGAGDANLRVFEADVL 69
           + + GA G+IG  + K  LD  + +          S+S     L     +   +    + 
Sbjct: 6   ILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSID 65

Query: 70  DSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVT 129
           D  ++  AV+    V                       ++  +N+++A K  G  +    
Sbjct: 66  DHASLVEAVKNVDVVISTVGSLQ---------------IESQVNIIKAIKEVGTVKRFFP 110

Query: 130 SSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAI 189
           S            G   D     +        K                 E  G+    +
Sbjct: 111 SEF----------GNDVDNVHAVEPAKSVFEVKAKV----------RRAIEAEGIPYTYV 150

Query: 190 HPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASG 249
                 G  ++    A      +  +          +  V  +D+    +   + P    
Sbjct: 151 SSNCFAGYFLRSLAQAGLTAPPR-DKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLN 209

Query: 250 RYLCTNG---IYQFGDFAERVSKL 270
           + L            +      K 
Sbjct: 210 KTLYLRLPANTLSLNELVALWEKK 233

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.6 bits (127), Expect = 7e-09
 Identities = 43/195 (22%), Positives = 69/195 (35%), Gaps = 17/195 (8%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSI------NATVFPGSDSSHLFALPGAGDANLRVFE 65
           V VTG  G+IG+  V  LL+  Y  +      NA    GS    L  +      ++   E
Sbjct: 5   VLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEE 64

Query: 66  ADVLDSGAVSRAVEGCKG--VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV 123
            D+LD GA+ R  +      V H A    + + V    +     + GT+ +LE  K  GV
Sbjct: 65  MDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGV 124

Query: 124 RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH- 182
           + +V +SS +                   +          Y  SK   E+   +  +   
Sbjct: 125 KNLVFSSSATVYGNPQYLP--------LDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADK 176

Query: 183 GVDVVAIHPATCLGP 197
             + V +      G 
Sbjct: 177 TWNAVLLRYFNPTGA 191

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 51.0 bits (120), Expect = 4e-08
 Identities = 32/219 (14%), Positives = 58/219 (26%), Gaps = 6/219 (2%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            V VTG  GF G WL   L     T    ++   +  S            ++    D+ D
Sbjct: 10  RVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR--VADGMQSEIGDIRD 67

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAV--QGTLNVLEAAKRFGVRRVVV 128
              +  ++   +              +   + +   +    GT+ +LEA +  G  + VV
Sbjct: 68  QNKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVV 127

Query: 129 TSSISAIVPNPGWKGKVFDETSW--TDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDV 186
             +      N  W     +  +    D             S             +HG  V
Sbjct: 128 NITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAV 187

Query: 187 VAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW 225
             +     +G            +L+   Q          
Sbjct: 188 ATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPH 226

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 47.7 bits (111), Expect = 6e-07
 Identities = 33/240 (13%), Positives = 58/240 (24%), Gaps = 26/240 (10%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYT----------------SINATVFPGSDSSHLFALPG 55
           V V G +G+ G      L   NY                  + +     S    +     
Sbjct: 4   VMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKA 63

Query: 56  AGDANLRVFEADVLDSGAVSRAVE-----GCKGVFHVASPCTLEDPVDPEKELILPAVQG 110
               ++ ++  D+ D   ++ + +              S                  V G
Sbjct: 64  LTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIG 123

Query: 111 TLNVLEAAKRFGVRRVVVTSSISA-----IVPNPGWKGKVFDETSWTDLEYCKSRKKWYP 165
           TLNVL A K FG    +V            +        +        L Y K    +Y 
Sbjct: 124 TLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYH 183

Query: 166 VSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW 225
           +SK           +  G+    ++     G              +        T    +
Sbjct: 184 LSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRF 243

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

 Score = 46.5 bits (108), Expect = 1e-06
 Identities = 14/65 (21%), Positives = 21/65 (32%), Gaps = 5/65 (7%)

Query: 12 VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
          V + G NGFIG  L + LL  ++  +          S     P     +    E D+   
Sbjct: 3  VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHP-----HFHFVEGDISIH 57

Query: 72 GAVSR 76
               
Sbjct: 58 SEWIE 62

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.8 bits (108), Expect = 2e-06
 Identities = 37/263 (14%), Positives = 75/263 (28%), Gaps = 39/263 (14%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPG-AGDANLRVFEADVL 69
              VTGA   IG    + LL              +      AL            + DV 
Sbjct: 5   VALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVA 64

Query: 70  DSGAVSRAVEGCK-------GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG 122
           D   +                + + A     ++     +  ++  + GT   L+   +  
Sbjct: 65  DQQQLRDTFRKVVDHFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQN 124

Query: 123 VR---RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFA 179
                 ++  SS++ ++P                  YC S+      +++ A   A    
Sbjct: 125 GGEGGIIINMSSLAGLMPVAQQPV------------YCASKHGIVGFTRSAA--LAANLM 170

Query: 180 EKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVK------D 233
              GV + AI P      +++       ++ ++   G     + H    +          
Sbjct: 171 -NSGVRLNAICPGFVNTAILE-------SIEKEENMGQYIEYKDHIKDMIKYYGILDPPL 222

Query: 234 VAKAQVLLFESPAASGRYLCTNG 256
           +A   + L E  A +G  +    
Sbjct: 223 IANGLITLIEDDALNGAIMKITT 245

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 44.3 bits (104), Expect = 6e-06
 Identities = 42/258 (16%), Positives = 74/258 (28%), Gaps = 53/258 (20%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           V VTGA+  IG  +  +L       +         +  +     A       F  DV   
Sbjct: 4   VVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKE 63

Query: 72  GAVSRAVE-----------GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKR 120
             V   ++                        +        E+I   + G     +AA +
Sbjct: 64  ADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATK 123

Query: 121 FGVR----RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAW 176
             ++    R++  +S+  ++ N G               Y  ++      SKT     A 
Sbjct: 124 IMMKKRKGRIINIASVVGLIGNIGQAN------------YAAAKAGVIGFSKTA----AR 167

Query: 177 EFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVK---- 232
           E A    ++V  +                   +   +     +  E   LG +P+     
Sbjct: 168 EGA-SRNINVNVV---------------CPGFIASDMTAKLGEDMEKKILGTIPLGRTGQ 211

Query: 233 --DVAKAQVLLFESPAAS 248
             +VA     L  SPAAS
Sbjct: 212 PENVAGLVEFLALSPAAS 229

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 44.3 bits (104), Expect = 6e-06
 Identities = 37/251 (14%), Positives = 68/251 (27%), Gaps = 26/251 (10%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
              VTGA   IG  +   L       I         +  + A      ++    +A+V  
Sbjct: 20  VALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGV 79

Query: 71  SGAVSRAVEGCK---GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVV 127
              + R  E      G   +    +        K++          +    + F  R   
Sbjct: 80  VEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAR--- 136

Query: 128 VTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK----TLAEKAAWEFAEKHG 183
                     +    G++    S T       +   Y  SK    T A   A + A    
Sbjct: 137 ------EAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMA-DKK 189

Query: 184 VDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVK------DVAKA 237
           + V  + P      +            + L   +++  EY  +   P++      D+A+ 
Sbjct: 190 ITVNVVAPGGIKTDMYHAVCREYIPNGENL--SNEEVDEYAAVQWSPLRRVGLPIDIARV 247

Query: 238 QVLLFESPAAS 248
            V    S    
Sbjct: 248 -VCFLASNDGG 257

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 43.7 bits (102), Expect = 9e-06
 Identities = 35/203 (17%), Positives = 56/203 (27%), Gaps = 27/203 (13%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
           +V VTGAN  IG  LV+ L+ +        +    D      L    D+ + V    V  
Sbjct: 5   SVVVTGANRGIGLGLVQQLVKDKNI--RHIIATARDVEKATELKSIKDSRVHVLPLTVTC 62

Query: 71  SGAVSRAVE------GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNV---------- 114
             ++   V       G  G+  + +   +        E     +   L+V          
Sbjct: 63  DKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQ 122

Query: 115 --LEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKT--- 169
             L   K    +      S+S         G      + +           Y +SK    
Sbjct: 123 KLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQ--FPVLAYRMSKAAIN 180

Query: 170 -LAEKAAWEFAEKHGVDVVAIHP 191
                 A +      V VV   P
Sbjct: 181 MFGRTLAVDLK-DDNVLVVNFCP 202

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

 Score = 43.5 bits (100), Expect = 1e-05
 Identities = 13/26 (50%), Positives = 16/26 (61%)

Query: 12 VCVTGANGFIGTWLVKTLLDNNYTSI 37
          + VTG  GFIG+ +VK L D   T I
Sbjct: 2  IIVTGGAGFIGSNIVKALNDKGITDI 27

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 43.0 bits (101), Expect = 1e-05
 Identities = 33/266 (12%), Positives = 70/266 (26%), Gaps = 52/266 (19%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNY----TSINATVFPGSDSSHLFALPGAGDANLRVFEA 66
              +TG++  IG                T  +A      ++       G  + N+    A
Sbjct: 7   VAIITGSSNGIGRATAVLFAREGAKVTITGRHAE--RLEETRQQILAAGVSEQNVNSVVA 64

Query: 67  DVLDSGAVSRAVEGCK-------GVFHVASPCTLEDPVDPEKELILPAVQGTLNV----- 114
           DV         +            + + A     +          + +   TLN+     
Sbjct: 65  DVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSV 124

Query: 115 -------LEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVS 167
                  +          V ++S  S +   P +                     +Y ++
Sbjct: 125 IALTKKAVPHLSSTKGEIVNISSIASGLHATPDF--------------------PYYSIA 164

Query: 168 K----TLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY 223
           K          A +   +HG+ V +I P           +       ++        +E 
Sbjct: 165 KAAIDQYTRNTAIDLI-QHGIRVNSISPGLVATG-FGSAMGMPEETSKKFYSTMATMKEC 222

Query: 224 HWLGAVP-VKDVAKAQVLLFESPAAS 248
              G +   +D+A+    L +   +S
Sbjct: 223 VPAGVMGQPQDIAEVIAFLADRKTSS 248

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 42.4 bits (98), Expect = 2e-05
 Identities = 33/251 (13%), Positives = 61/251 (24%), Gaps = 45/251 (17%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            V + GA G  G  L+  +L     +                         +V       
Sbjct: 4   RVLLAGATGLTGEHLLDRILSEPTLA-------------------------KVI------ 32

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
             A +R             P      + P+ +  +      L               V  
Sbjct: 33  --APARKALAEHPRLDN--PVGPLAELLPQLDGSIDTAFCCLGTTIKEAGSEEAFRAVDF 88

Query: 131 SISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIH 190
            +   V     +         + L        +Y   K   E+A  E        +    
Sbjct: 89  DLPLAVGKRALEMGARHYLVVSALGADAKSSIFYNRVKGELEQALQEQGWPQ---LTIAR 145

Query: 191 PATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGR 250
           P+   GP  +  L    A     +   K          +   D+A+A   L        R
Sbjct: 146 PSLLFGPREEFRLAEILAAPIARILPGK-------YHGIEACDLARALWRLALEEGKGVR 198

Query: 251 YLCTNGIYQFG 261
           ++ ++ + + G
Sbjct: 199 FVESDELRKLG 209

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score = 41.8 bits (98), Expect = 4e-05
 Identities = 42/267 (15%), Positives = 69/267 (25%), Gaps = 71/267 (26%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNY----TSINATVFPGSDSSHLFALPGAGDANLRVFEA 66
            V VTG    IG  + +             +                  A       F+ 
Sbjct: 7   GVLVTGGARGIGRAIAQAFAREGALVALCDLRPE-----------GKEVAEAIGGAFFQV 55

Query: 67  DVLDSGAVSRAVEGCKGVFH----------VASPCTLEDPVDPEKELILPA-VQGTLNVL 115
           D+ D     R VE                 +A+P +      PE   +L   +   +++ 
Sbjct: 56  DLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLS 115

Query: 116 EAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK--- 168
             A R     G   +V  +S+  +                            Y  SK   
Sbjct: 116 ALAAREMRKVGGGAIVNVASVQGLFAEQEN--------------------AAYNASKGGL 155

Query: 169 -TLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG 227
             L    A + A    + V A+ P       +   +  S            +     W  
Sbjct: 156 VNLTRSLALDLA-PLRIRVNAVAPGAIATEAVLEAIALS---------PDPERTRRDWED 205

Query: 228 AVPVK------DVAKAQVLLFESPAAS 248
              ++      +VA+A VL   S  AS
Sbjct: 206 LHALRRLGKPEEVAEA-VLFLASEKAS 231

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score = 41.6 bits (97), Expect = 4e-05
 Identities = 34/258 (13%), Positives = 71/258 (27%), Gaps = 38/258 (14%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            V    A G IG    + L+  N  +        + ++           N+     DV  
Sbjct: 7   NVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTV 66

Query: 71  SGA-----VSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRR 125
             A     + +  +  K V  + +   + D    E+ + +    G +N   A   F  +R
Sbjct: 67  PVAESKKLLKKIFDQLKTVDILINGAGILDDHQIERTIAI-NFTGLVNTTTAILDFWDKR 125

Query: 126 -------VVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEF 178
                  +    S++                      Y  S+      + +LA+ A    
Sbjct: 126 KGGPGGIIANICSVTGFNAIHQVPV------------YSASKAAVVSFTNSLAKLAP--- 170

Query: 179 AEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQ 238
               GV   +I+P     PL+  + +        +     +    H       +   +  
Sbjct: 171 --ITGVTAYSINPGITRTPLVHTFNSW-----LDVEPRVAELLLSHPTQ--TSEQCGQN- 220

Query: 239 VLLFESPAASGRYLCTNG 256
            +       +G     + 
Sbjct: 221 FVKAIEANKNGAIWKLDL 238

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.1 bits (96), Expect = 5e-05
 Identities = 37/217 (17%), Positives = 60/217 (27%), Gaps = 41/217 (18%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            V +TGA   IG              +   +             G G A +  F  D  +
Sbjct: 9   IVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLG-AKVHTFVVDCSN 67

Query: 71  SGAVSRAVEGCK---GVFHVASPCTLEDPVDPEKELILPAVQGTLNV------------L 115
              +  + +  K   G   +                  P ++ T  V            L
Sbjct: 68  REDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFL 127

Query: 116 EAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAA 175
            A  +     +V  +S +  V  P                YC S+       KTL ++ A
Sbjct: 128 PAMTKNNHGHIVTVASAAGHVSVPFLLA------------YCSSKFAAVGFHKTLTDELA 175

Query: 176 WEFAEKHGVDVVAIHP-----------ATCLGPLMQP 201
               +  GV    + P           +T LGP ++P
Sbjct: 176 AL--QITGVKTTCLCPNFVNTGFIKNPSTSLGPTLEP 210

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

 Score = 41.5 bits (95), Expect = 6e-05
 Identities = 13/71 (18%), Positives = 24/71 (33%), Gaps = 19/71 (26%)

Query: 12 VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
          + + G  G +G  L ++L                   +L AL    D + + F  D  + 
Sbjct: 3  ILLFGKTGQVGWELQRSLAPVG---------------NLIAL----DVHSKEFCGDFSNP 43

Query: 72 GAVSRAVEGCK 82
            V+  V   +
Sbjct: 44 KGVAETVRKLR 54

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.1 bits (96), Expect = 6e-05
 Identities = 42/251 (16%), Positives = 70/251 (27%), Gaps = 44/251 (17%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            V VTGA   IG   V+ L       +          + L +L       +     D+ D
Sbjct: 9   RVLVTGAGKGIGRGTVQALHATGARVVAV----SRTQADLDSLVRECP-GIEPVCVDLGD 63

Query: 71  SGAVSRAVEGCKGV-------FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAA----- 118
             A  RA+     V               LE   +         ++  + V +       
Sbjct: 64  WEATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLI 123

Query: 119 KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEF 178
            R     +V  SS  +                     YC ++     ++K +A     E 
Sbjct: 124 ARGVPGAIVNVSSQCSQRAVTNHSV------------YCSTKGALDMLTKVMAL----EL 167

Query: 179 AEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG-AVPVKDVAKA 237
              H + V A++P   +  + Q   +             K       LG    V+ V  A
Sbjct: 168 G-PHKIRVNAVNPTVVMTSMGQATWSDPHKA--------KTMLNRIPLGKFAEVEHVVNA 218

Query: 238 QVLLFESPAAS 248
            +L   S  + 
Sbjct: 219 -ILFLLSDRSG 228

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 41.1 bits (96), Expect = 6e-05
 Identities = 36/255 (14%), Positives = 73/255 (28%), Gaps = 44/255 (17%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
              VTG    +G  +VK LL           F   + +    L             DV  
Sbjct: 8   VALVTGGASGVGLEVVKLLLGEGAK----VAFSDINEAAGQQLAAELGERSMFVRHDVSS 63

Query: 71  SGAVSRAVEGCK-------------GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEA 117
               +  +   +             G+       T     +    L+    +      + 
Sbjct: 64  EADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRL--EDFSRLLKINTESVFIGCQQ 121

Query: 118 AKRFGVR---RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKA 174
                      ++  +S+S+ +P   + G            Y  S+     +++      
Sbjct: 122 GIAAMKETGGSIINMASVSSWLPIEQYAG------------YSASKAAVSALTRAA---- 165

Query: 175 AWEFAEK-HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKD 233
           A    ++ + + V +IHP     P+MQ  L     V ++++                 + 
Sbjct: 166 ALSCRKQGYAIRVNSIHPDGIYTPMMQASLPK--GVSKEMVLHDPKLNRAGRAYM--PER 221

Query: 234 VAKAQVLLFESPAAS 248
           +A+  VL   S  +S
Sbjct: 222 IAQL-VLFLASDESS 235

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 40.8 bits (95), Expect = 8e-05
 Identities = 32/263 (12%), Positives = 72/263 (27%), Gaps = 45/263 (17%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNY----TSINATVFPGSDSSHLFALPGAGDANLRVFEA 66
           TV +TG++  IG                T  ++      ++  +    G  +  +    A
Sbjct: 7   TVIITGSSNGIGRTTAILFAQEGANVTITGRSSE--RLEETRQIILKSGVSEKQVNSVVA 64

Query: 67  DVLDSGAVSRAVEGCK-------GVFHVASPCTLEDPVDPEKELILPA--------VQGT 111
           DV       + +            + + A     +       +  +          +Q  
Sbjct: 65  DVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAV 124

Query: 112 LNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVS 167
           + + +  K          V V+S ++     P +   ++   +   L+            
Sbjct: 125 IEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDF---LYYAIAKAALD------------ 169

Query: 168 KTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG 227
                  A + A K G+ V ++ P           +       Q+        +E   +G
Sbjct: 170 -QYTRSTAIDLA-KFGIRVNSVSPGMVETGFTNA-MGMPDQASQKFYNFMASHKECIPIG 226

Query: 228 AVP-VKDVAKAQVLLFESPAASG 249
           A    + +A   +L       S 
Sbjct: 227 AAGKPEHIANI-ILFLADRNLSF 248

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.7 bits (95), Expect = 9e-05
 Identities = 38/256 (14%), Positives = 70/256 (27%), Gaps = 41/256 (16%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAG-DANLRVFEADVL 69
              VTGA+G IG  + + L+      +      G+          AG    L  +  D+ 
Sbjct: 12  LALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLS 71

Query: 70  DSGAVSRAVEGCKGVF----------HVASPCTLEDPVDPEKELIL-----PAVQGTLNV 114
           +   +       +              +A P TL        + +           T   
Sbjct: 72  NEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREA 131

Query: 115 LEAAKRFGVR--RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAE 172
            ++ K   V    ++  +S+S     P                Y  +  K+   + T   
Sbjct: 132 YQSMKERNVDDGHIININSMSGHRVLPLSVTHF----------YSAT--KYAVTALTEGL 179

Query: 173 KAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVK 232
           +     A +  +    I P            +             K    Y  +  +  +
Sbjct: 180 RQELREA-QTHIRATCISPGVVETQFAFKLHDK---------DPEKAAATYEQMKCLKPE 229

Query: 233 DVAKAQVLLFESPAAS 248
           DVA+A V+   S  A 
Sbjct: 230 DVAEA-VIYVLSTPAH 244

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

 Score = 40.6 bits (93), Expect = 1e-04
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query: 12 VCVTGANGFIGTWLVKTLLDNNYTSI 37
          + +TGANG +G  + K L   N   I
Sbjct: 4  ILITGANGQLGREIQKQLKGKNVEVI 29

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.1 bits (92), Expect = 1e-04
 Identities = 8/24 (33%), Positives = 14/24 (58%)

Query: 11 TVCVTGANGFIGTWLVKTLLDNNY 34
          +V + GA+G  G  L+K +L+   
Sbjct: 16 SVFILGASGETGRVLLKEILEQGL 39

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 40.4 bits (94), Expect = 1e-04
 Identities = 38/259 (14%), Positives = 74/259 (28%), Gaps = 43/259 (16%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            V +TG    +G  LV   +                +  L  L      N+     DV  
Sbjct: 7   AVLITGGASGLGRALVDRFVAEGAK----VAVLDKSAERLAELETDHGDNVLGIVGDVRS 62

Query: 71  SGAVSRAVE-------------GCKGVFHVASPCTLEDPVDPE---KELILPAVQGTLNV 114
                +A                  G++  ++          +    E+    V+G ++ 
Sbjct: 63  LEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHA 122

Query: 115 LEAAKRFGVRR---VVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLA 171
           ++A     V     V+ T S +   PN G               Y  ++     + + L 
Sbjct: 123 VKACLPALVASRGNVIFTISNAGFYPNGGGPL------------YTAAKHAIVGLVREL- 169

Query: 172 EKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP- 230
              A+E A    V V  +        L  P      +     +  +   +    +G +P 
Sbjct: 170 ---AFELA--PYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPE 224

Query: 231 VKDVAKAQVLLFESPAASG 249
           V++   A  + F +   + 
Sbjct: 225 VEEYTGA-YVFFATRGDAA 242

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 39.4 bits (91), Expect = 2e-04
 Identities = 30/248 (12%), Positives = 63/248 (25%), Gaps = 24/248 (9%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
           T  +TG+   IG    +  +               +     A              DV D
Sbjct: 7   TALITGSARGIGRAFAEAYVREGAR----VAIADINLEAARATAAEIGPAACAIALDVTD 62

Query: 71  SGAVSRAVEGCK---GVFHVASPCTLEDPVDPEKELILPAVQGTLNV-LEAAKRFGVRRV 126
             ++ R V       G   +         + P  E+   +      + +           
Sbjct: 63  QASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVA 122

Query: 127 VVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDV 186
               +            +           YC ++     ++++           +HG++V
Sbjct: 123 RAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSA----GLNLI-RHGINV 177

Query: 187 VAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVK------DVAKAQVL 240
            AI P    G +   + +   A         +  ++     AVP        D+     +
Sbjct: 178 NAIAP----GVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGM-AI 232

Query: 241 LFESPAAS 248
              +P A 
Sbjct: 233 FLATPEAD 240

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.3 bits (88), Expect = 6e-04
 Identities = 49/267 (18%), Positives = 83/267 (31%), Gaps = 43/267 (16%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSIN--ATVFPGSDSSHLFALP---GAGDANLRVFEA 66
           V +TG +  IG  L   L  +   S    AT+        L+           +L   + 
Sbjct: 5   VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQL 64

Query: 67  DVLDSGAVSRAVEGCKGVF-------------HVASPCTLEDPVDPEKELILPAVQGTLN 113
           DV DS +V+ A E                           +         ++  V+    
Sbjct: 65  DVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQA 124

Query: 114 VLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEK 173
            L   KR G  RV+VT S+  ++  P                YC S+     + ++LA  
Sbjct: 125 FLPDMKRRGSGRVLVTGSVGGLMGLPFNDV------------YCASKFALEGLCESLA-- 170

Query: 174 AAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVL--------QQLLQGSKDTQEYHW 225
                    GV +  I         M+  L +   VL         +  Q    +++   
Sbjct: 171 --VLLL-PFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFR 227

Query: 226 LGAVPVKDVAKAQVLLFESPAASGRYL 252
             A   ++VA+  +    +P  + RY 
Sbjct: 228 EAAQNPEEVAEVFLTALRAPKPTLRYF 254

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score = 38.1 bits (88), Expect = 6e-04
 Identities = 40/264 (15%), Positives = 72/264 (27%), Gaps = 59/264 (22%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
           T  VTG +  IG  +V+ L     +    +      +  L      G   +     D+  
Sbjct: 10  TALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKG-FKVEASVCDLSS 68

Query: 71  SGAVSRAVEGCKGVFH-----------VASPCTLEDPVDPEKELILPA-VQGTLNVLEAA 118
                  +      FH           +      +D    +  LI+    +   ++   A
Sbjct: 69  RSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLA 128

Query: 119 ----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK----TL 170
               K      VV  SS+S  +  P                        Y  +K     L
Sbjct: 129 HPFLKASERGNVVFISSVSGALAVPYE--------------------AVYGATKGAMDQL 168

Query: 171 AEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP 230
               A+E+A K  + V  + P      L++  +              +       +    
Sbjct: 169 TRCLAFEWA-KDNIRVNGVGPGVIATSLVEMTIQD----------PEQKENLNKLIDRCA 217

Query: 231 VK------DVAKAQVLLFESPAAS 248
           ++      ++A   V     PAAS
Sbjct: 218 LRRMGEPKELAAM-VAFLCFPAAS 240

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.7 bits (87), Expect = 7e-04
 Identities = 46/251 (18%), Positives = 82/251 (32%), Gaps = 44/251 (17%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
              VTGA   IG   VK L  +      A V   + ++            +     D+ D
Sbjct: 7   RALVTGAGKGIGRDTVKALHAS-----GAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGD 61

Query: 71  SGAVSRAVEGCKGV---FHVASP----CTLEDPVDPEKELILPAVQGTLNVLEAA----- 118
             A  +A+ G   V    + A+       LE   +         ++    V +       
Sbjct: 62  WDATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMI 121

Query: 119 KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEF 178
            R     +V  SS+ A V  P              + Y  ++     ++K +A     E 
Sbjct: 122 NRGVPGSIVNVSSMVAHVTFPNL------------ITYSSTKGAMTMLTKAMAM----EL 165

Query: 179 AEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP-VKDVAKA 237
              H + V +++P   L   M   ++A     ++L +        H L     V+DV  +
Sbjct: 166 G-PHKIRVNSVNPTVVLTD-MGKKVSADPEFARKLKER-------HPLRKFAEVEDVVNS 216

Query: 238 QVLLFESPAAS 248
            +L   S  ++
Sbjct: 217 -ILFLLSDRSA 226

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score = 37.9 bits (87), Expect = 8e-04
 Identities = 34/251 (13%), Positives = 62/251 (24%), Gaps = 25/251 (9%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYT-SINATVFPGSDSSHLFALPGAGDANLRVFEADVL 69
              VTG+   IG  +   L        +N              L       +    AD+ 
Sbjct: 6   VAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLS 65

Query: 70  DSGAVSRAVE------GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV 123
              AV   V+      G   +    +       ++        A+               
Sbjct: 66  KGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAA 125

Query: 124 RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHG 183
              +       I+      G V          Y  ++      +K  A     E A   G
Sbjct: 126 LPHMKKQGFGRIINIASAHGLVASANKSA---YVAAKHGVVGFTKVTA----LETA-GQG 177

Query: 184 VDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVK------DVAKA 237
           +   AI P     PL++  ++   A+ ++     +           P         +   
Sbjct: 178 ITANAICPGWVRTPLVEKQIS---ALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGT 234

Query: 238 QVLLFESPAAS 248
             +   S AA+
Sbjct: 235 -AVFLASDAAA 244

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Length = 383

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

 Score = 37.8 bits (86), Expect = 0.001
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 12 VCVTGANGFIGTWLVKTLLDNN 33
          V V G  G+IG+  V+ LL + 
Sbjct: 5  VLVCGGAGYIGSHFVRALLRDT 26

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 37.3 bits (86), Expect = 0.001
 Identities = 37/252 (14%), Positives = 72/252 (28%), Gaps = 26/252 (10%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNY----TSINATVFPGSDSSHLFALPGAGDANLRVFEA 66
           +V +TG++  IG                T  N       ++       G     +    A
Sbjct: 6   SVIITGSSNGIGRSAAVIFAKEGAQVTITGRNED--RLEETKQQILKAGVPAEKINAVVA 63

Query: 67  DVLDSGAVSRAVEGCKGVF-----HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF 121
           DV ++      +      F      V +            +  +   Q T  +   A   
Sbjct: 64  DVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQA--- 120

Query: 122 GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK----TLAEKAAWE 177
                V+  +          KG++ + +S        S   +Y  +K          A +
Sbjct: 121 -----VIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAID 175

Query: 178 FAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP-VKDVAK 236
              +HGV V ++ P       M   +        +L       +E   +G     +++A 
Sbjct: 176 LI-QHGVRVNSVSPGAVATGFMGA-MGLPETASDKLYSFIGSRKECIPVGHCGKPEEIAN 233

Query: 237 AQVLLFESPAAS 248
             V L +   +S
Sbjct: 234 IIVFLADRNLSS 245

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 36.9 bits (85), Expect = 0.001
 Identities = 38/266 (14%), Positives = 70/266 (26%), Gaps = 63/266 (23%)

Query: 8   EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEAD 67
           E +   VTGA   IG  + K L  +    I  +    S  S +  +   G      +  D
Sbjct: 9   ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFG-YESSGYAGD 67

Query: 68  VLDSGAVSRAVE-----------GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLE 116
           V     +S  +                         L    D  ++++   +     + +
Sbjct: 68  VSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQ 127

Query: 117 AAKRFGVR----RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK---- 168
              +  +     R++  SSI  +  N G                       Y  SK    
Sbjct: 128 PISKRMINNRYGRIINISSIVGLTGNVGQAN--------------------YSSSKAGVI 167

Query: 169 TLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA 228
              +  A E A    + V AI P                 +   +     +  + + +  
Sbjct: 168 GFTKSLAKELA-SRNITVNAIAP---------------GFISSDMTDKISEQIKKNIISN 211

Query: 229 VPVK------DVAKAQVLLFESPAAS 248
           +P        +VA        S  + 
Sbjct: 212 IPAGRMGTPEEVANL-ACFLSSDKSG 236

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score = 36.6 bits (84), Expect = 0.002
 Identities = 40/261 (15%), Positives = 74/261 (28%), Gaps = 50/261 (19%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
           T+ VTG N  IG    + +                       +        + ++ DV +
Sbjct: 11  TIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSN 70

Query: 71  SGAVSRAVEGCKGVF----------HVASPCTLEDPVDPEKELILPAVQ--GTLNVLEAA 118
           +  V++ ++                 V+      + +  E    +  V   G  N   A 
Sbjct: 71  TDIVTKTIQQIDADLGPISGLIANAGVSVVKPATE-LTHEDFAFVYDVNVFGVFNTCRAV 129

Query: 119 KR-----FGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEK 173
            +          +VVTSS+S+ + N         +       Y  S+     + K L   
Sbjct: 130 AKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVF-----YNSSKAACSNLVKGL--- 181

Query: 174 AAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVK- 232
            A E+A   G+ V A+ P                 V              H    +P+  
Sbjct: 182 -AAEWA-SAGIRVNALSP---------------GYVNTDQTAHMDKKIRDHQASNIPLNR 224

Query: 233 -----DVAKAQVLLFESPAAS 248
                ++     +L  S  A+
Sbjct: 225 FAQPEEMTGQ-AILLLSDHAT 244

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score = 36.3 bits (83), Expect = 0.003
 Identities = 49/261 (18%), Positives = 81/261 (31%), Gaps = 48/261 (18%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYT-SINATVFPGSDSSHLFALPGAGDANLRVFEADVL 69
            V +TG    +G      L       S+      G ++S    L  A DA +    ADV 
Sbjct: 6   VVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVS 65

Query: 70  DSGAVSRAVEGCK-------GVFHVASPCTLEDPVDPEKELILPAVQ---------GTLN 113
           D   V   V           G F+ A     ++P +         V          G   
Sbjct: 66  DEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEK 125

Query: 114 VLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEK 173
           VL+  +  G   VV T+S+  I              +   +               L   
Sbjct: 126 VLKIMREQGSGMVVNTASVGGIRGIGNQ---SGYAAAKHGVVG-------------LTRN 169

Query: 174 AAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVK- 232
           +A E+  ++G+ + AI P     P+++         ++QL   +       ++   P K 
Sbjct: 170 SAVEYG-RYGIRINAIAPGAIWTPMVE-------NSMKQLDPENPRKAAEEFIQVNPSKR 221

Query: 233 -----DVAKAQVLLFESPAAS 248
                ++A   V    S  AS
Sbjct: 222 YGEAPEIAAV-VAFLLSDDAS 241

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 35.5 bits (81), Expect = 0.004
 Identities = 39/248 (15%), Positives = 62/248 (25%), Gaps = 26/248 (10%)

Query: 14  VTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGA 73
           VTGA   IG  + + L                  + L  L  AG         DV     
Sbjct: 7   VTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG-VEADGRTCDVRSVPE 65

Query: 74  VSRAVEGCK---GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
           +   V       G   V              EL        +           ++V+   
Sbjct: 66  IEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVL--- 122

Query: 131 SISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK----TLAEKAAWEFAEKHGVDV 186
                              + T  +        Y  SK       +    E A + G+ V
Sbjct: 123 ---KAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELA-RTGITV 178

Query: 187 VAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVK------DVAKAQVL 240
            A+ P    G +  P   +       + + S +         VP+       +VA+  V 
Sbjct: 179 NAVCP----GFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEM-VA 233

Query: 241 LFESPAAS 248
               P A+
Sbjct: 234 YLIGPGAA 241

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	278
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	100.0
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	100.0
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	100.0
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	100.0
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	100.0
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	100.0
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	100.0
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	100.0
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	100.0
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	100.0
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	100.0
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	100.0
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	100.0
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	100.0
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.98
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.98
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.97
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.97
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.96
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.96
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.96
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.96
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.95
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.95
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.95
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.95
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.95
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.95
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.95
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.95
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.95
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.95
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.95
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.95
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.95
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.95
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.95
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.95
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.95
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.95
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.95
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.95
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.95
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.94
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.94
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.94
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.94
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.94
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.94
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.93
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.93
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.93
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.93
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.93
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.93
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.93
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.93
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.93
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.93
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.93
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.93
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.93
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.93
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.93
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.92
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.92
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.92
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.92
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.91
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.91
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.9
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.9
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.9
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.9
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.89
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.89
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.88
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.88
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.88
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.87
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.87
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.86
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.86
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.84
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.84
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.8
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.8
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.8
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.78
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.75
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.51
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	98.7
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	98.55
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	98.51
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	98.51
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	98.4
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	98.39
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	98.36
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	98.35
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.27
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	98.26
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	98.19
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	98.08
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	98.05
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	98.04
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	98.03
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	98.0
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	98.0
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	97.97
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.96
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.94
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	97.93
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.92
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.91
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	97.91
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.9
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	97.89
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	97.89
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.87
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	97.87
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	97.87
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.86
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.85
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.81
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	97.79
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	97.79
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.78
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.75
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	97.73
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.73
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.72
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.71
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	97.71
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.65
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.65
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.63
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.56
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.54
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.52
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.5
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	97.5
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.49
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.46
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	97.42
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	97.38
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.38
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	97.36
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.3
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	97.29
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	97.29
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.28
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	97.27
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	97.22
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	97.12
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.12
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.1
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.06
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.05
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	97.05
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	97.04
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	97.01
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	97.01
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	97.0
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	97.0
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	96.99
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	96.98
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	96.93
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	96.92
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	96.91
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.86
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	96.84
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.75
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	96.72
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.69
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	96.68
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	96.57
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	96.51
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.45
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	96.45
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.43
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	96.43
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	96.35
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.31
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	96.31
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	96.29
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	96.26
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	96.24
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	96.24
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	96.23
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	96.18
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.15
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	96.14
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	96.12
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	96.11
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	96.09
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	96.07
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	96.04
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.01
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	95.97
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	95.96
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	95.93
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.93
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	95.91
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	95.91
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	95.9
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	95.89
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	95.87
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	95.87
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	95.8
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	95.76
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	95.76
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	95.72
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	95.7
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	95.66
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	95.59
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	95.55
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	95.46
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	95.41
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	95.4
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	95.4
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.35
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	95.25
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	95.13
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	95.09
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	94.99
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	94.94
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	94.92
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	94.87
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	94.83
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	94.71
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	94.71
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	94.64
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	94.63
d2dt5a2	126	Transcriptional repressor Rex, C-terminal domain {	94.56
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	94.56
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	94.46
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.32
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	94.3
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	94.18
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	94.1
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	94.01
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	93.88
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	93.85
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	93.79
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	93.68
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	93.64
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	93.64
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	93.58
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	93.55
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	93.4
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	93.39
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	93.35
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	93.3
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	93.14
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	92.93
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	92.89
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	92.86
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.82
d1w5fa1	194	Cell-division protein FtsZ {Thermotoga maritima [T	92.47
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	92.43
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	92.01
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	91.97
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	91.89
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	91.85
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	91.72
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	91.68
d2vapa1	209	Cell-division protein FtsZ {Archaeon Methanococcus	91.54
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	91.45
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	91.35
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	91.18
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	91.15
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	91.05
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	90.91
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	90.69
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	90.57
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	90.51
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	89.9
d1d7ya1	183	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	89.79
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	89.46
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	89.34
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	89.33
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	88.98
d1ofua1	198	Cell-division protein FtsZ {Pseudomonas aeruginosa	88.92
d1rq2a1	198	Cell-division protein FtsZ {Mycobacterium tubercul	88.69
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	88.21
d1lc0a1	172	Biliverdin reductase {Rat (Rattus norvegicus) [Tax	87.37
d1ps9a2	162	2,4-dienoyl-CoA reductase, C-terminal domain {Esch	86.91
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	86.62
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	86.38
d1vkza2	90	Glycinamide ribonucleotide synthetase (GAR-syn), N	85.81
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	85.74
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	85.67
d2nu7a1	119	Succinyl-CoA synthetase, alpha-chain, N-terminal (	85.66
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	85.15
d1cjca1	225	Adrenodoxin reductase of mitochondrial p450 system	84.88
d1rp0a1	278	Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara	84.84
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	84.58
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	84.5
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	84.38
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	84.34
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	84.1
d1lqta1	216	Ferredoxin:NADP reductase FprA {Mycobacterium tube	83.89
d1p3y1_	183	MrsD {Bacillus sp. hil-y85/54728 [TaxId: 69002]}	83.57
d1vjta1	193	Putative alpha-glucosidase TM0752 {Thermotoga mari	83.31
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	83.0
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	82.61
d1n4wa1	367	Cholesterol oxidase of GMC family {Streptomyces sp	82.58
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	81.52
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	81.17
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	80.8
d1euca1	130	Succinyl-CoA synthetase, alpha-chain, N-terminal (	80.78
d1hdgo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	80.66
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	80.34
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	80.15

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.2e-42  Score=293.83  Aligned_cols=252  Identities=17%  Similarity=0.194  Sum_probs=197.8

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCC-----CcccccCCCCCCCceEEEEccCCChhhHHHHhcC--cc
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-----SSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG--CK   82 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~-----~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~--~d   82 (278)
                      |+|||||||||||++|+++|++.|+ +|++++|....     .+.+.........+++++++|++|.+++.+++++  +|
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d   80 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGY-EVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD   80 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcC-EEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCC
Confidence            7899999999999999999999999 99999985432     1112111112223899999999999999999985  59


Q ss_pred             EEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCC---CEEEEecceeeeecCCCCCCccccCCCCCchhhhhc
Q 023689           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV---RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKS  159 (278)
Q Consensus        83 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~---~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~  159 (278)
                      +|||+|+..+.....+++...+++|+.||.+|+++|++.++   ++||++||.+ +|+.+.  ..+++|+++..|.    
T Consensus        81 ~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~-vYG~~~--~~~~~E~~~~~P~----  153 (357)
T d1db3a_          81 EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSE-LYGLVQ--EIPQKETTPFYPR----  153 (357)
T ss_dssp             EEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGG-GGTTCC--SSSBCTTSCCCCC----
T ss_pred             EEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchh-hhCCCC--CCCcCCCCCCCCC----
Confidence            99999998777666777888999999999999999998764   4699999854 455443  3679999876653    


Q ss_pred             cCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCC--chhHHHHHHHhhCCCCcc----cccccCcccHHH
Q 023689          160 RKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL--NASCAVLQQLLQGSKDTQ----EYHWLGAVPVKD  233 (278)
Q Consensus       160 ~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~----~~~~~~~i~~~D  233 (278)
                        ++|+.+|.++|++++.++++++++++++||+++|||......  ..+...+.....+.+...    +++.++++|++|
T Consensus       154 --~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D  231 (357)
T d1db3a_         154 --SPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKD  231 (357)
T ss_dssp             --SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHH
T ss_pred             --ChHHHHHHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeech
Confidence              789999999999999999999999999999999999765442  244555555556655432    447899999999


Q ss_pred             HHHHHHhhhcCCCCCceE-EecCccccHHHHHHHHHHhCC
Q 023689          234 VAKAQVLLFESPAASGRY-LCTNGIYQFGDFAERVSKLFP  272 (278)
Q Consensus       234 ~a~~~~~~~~~~~~~~~~-~~~~~~~s~~e~~~~i~~~~~  272 (278)
                      +|++++.++++.. .+.| +++++.+|++|+++.+.+.++
T Consensus       232 ~~~a~~~~~~~~~-~~~yni~sg~~~s~~~~~~~~~~~~g  270 (357)
T d1db3a_         232 YVKMQWMMLQQEQ-PEDFVIATGVQYSVRQFVEMAAAQLG  270 (357)
T ss_dssp             HHHHHHHTTSSSS-CCCEEECCCCCEEHHHHHHHHHHTTT
T ss_pred             HHHHHHHHHhCCC-CCeEEECCCCceehHHHHHHHHHHhC
Confidence            9999999988753 4566 556889999999999999874

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=100.00  E-value=3.4e-41  Score=281.15  Aligned_cols=251  Identities=22%  Similarity=0.267  Sum_probs=203.5

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCC-----eEEEEecCC--CCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCcc
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYT-----SINATVFPG--SDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCK   82 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~-----~v~~~~r~~--~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d   82 (278)
                      |||||||||||||++|+++|+++|+.     +++.+++..  .....+....  ...+++++.+|+.+..........+|
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~~~~~~~~~d   78 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVD--ADPRLRFVHGDIRDAGLLARELRGVD   78 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGT--TCTTEEEEECCTTCHHHHHHHTTTCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhh--cCCCeEEEEeccccchhhhccccccc
Confidence            58999999999999999999999872     234443321  1112222221  12289999999999999999999999


Q ss_pred             EEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCc
Q 023689           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK  162 (278)
Q Consensus        83 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  162 (278)
                      .|+|+|+..............+++|+.|+.+++++|++.++++||++||++.++.. .  ..+++|+++..|.      +
T Consensus        79 ~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~-~--~~~~~E~~~~~p~------~  149 (322)
T d1r6da_          79 AIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSI-D--SGSWTESSPLEPN------S  149 (322)
T ss_dssp             EEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCC-S--SSCBCTTSCCCCC------S
T ss_pred             eEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeecCC-C--CCCCCCCCCCCCC------C
Confidence            99999987554333445678899999999999999999999999999986655443 2  3678999877664      6


Q ss_pred             hhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcc---cccccCcccHHHHHHHHH
Q 023689          163 WYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ---EYHWLGAVPVKDVAKAQV  239 (278)
Q Consensus       163 ~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~D~a~~~~  239 (278)
                      .|+.+|.++|.+++.++++++++++++||+++|||.+... ..+..++.+...+.++.+   +.+.++++|++|+|+++.
T Consensus       150 ~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~-~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai~  228 (322)
T d1r6da_         150 PYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPE-KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIA  228 (322)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTT-SHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEECcCCCcC-cHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHHH
Confidence            8999999999999999999999999999999999986553 467788888888888765   458899999999999999


Q ss_pred             hhhcCCCCCceEE-ecCccccHHHHHHHHHHhCC
Q 023689          240 LLFESPAASGRYL-CTNGIYQFGDFAERVSKLFP  272 (278)
Q Consensus       240 ~~~~~~~~~~~~~-~~~~~~s~~e~~~~i~~~~~  272 (278)
                      .+++++..+++|+ .+++.+++.|+++.+.+.++
T Consensus       229 ~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~  262 (322)
T d1r6da_         229 LVLAGGRAGEIYHIGGGLELTNRELTGILLDSLG  262 (322)
T ss_dssp             HHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHT
T ss_pred             HHHhCCCCCCeeEEeecccchhHHHHHHHHHHhC
Confidence            9999887767775 55779999999999999874

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=2.8e-40  Score=279.49  Aligned_cols=256  Identities=19%  Similarity=0.187  Sum_probs=195.7

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCC--CcccccCCCCCCCceEEEEccCCChhhHHHHhc--CccEEE
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD--SSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVF   85 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~--~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vi   85 (278)
                      |||||||||||||++|+++|+++|++.|+++++....  ...+..+..  ..+++++++|++|++.+.++++  ++|+||
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vi   78 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISE--SNRYNFEHADICDSAEITRIFEQYQPDAVM   78 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTT--CTTEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhh--cCCcEEEEccCCCHHHHHHHHHhCCCCEEE
Confidence            5899999999999999999999999555655543222  122222222  2289999999999999999887  589999


Q ss_pred             EecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcC---------CCEEEEecceeeeecCCCCCCccccCCCCCch--
Q 023689           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG---------VRRVVVTSSISAIVPNPGWKGKVFDETSWTDL--  154 (278)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~---------~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~--  154 (278)
                      |+|+.........++...+++|+.|+.+++++|++.+         +++||++||..++.....   ....|.....+  
T Consensus        79 hlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~---~~~~~~~~~~~~~  155 (361)
T d1kewa_          79 HLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPH---PDEVENSVTLPLF  155 (361)
T ss_dssp             ECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCC---GGGSCTTSCCCCB
T ss_pred             ECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCcc---CCccccccCCCCc
Confidence            9998755433334567889999999999999997753         458999998665543322   22222221111  


Q ss_pred             --hhhhccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcc---cccccCcc
Q 023689          155 --EYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ---EYHWLGAV  229 (278)
Q Consensus       155 --~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i  229 (278)
                        .....+.+.||.+|.++|.++..++++++++++++||++||||..... ..+..++.++..|.++.+   +++.++|+
T Consensus       156 ~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~-~~i~~~i~~~~~g~~~~v~g~g~~~r~~i  234 (361)
T d1kewa_         156 TETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPE-KLIPLVILNALEGKPLPIYGKGDQIRDWL  234 (361)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT-SHHHHHHHHHHHTCCEEEETTSCCEEEEE
T ss_pred             ccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCcC-cHHHHHHHHHHcCCCcEEeCCCCeEEeCE
Confidence              011233478999999999999999999999999999999999986553 467788899999988754   35889999


Q ss_pred             cHHHHHHHHHhhhcCCCCCceEEe-cCccccHHHHHHHHHHhC
Q 023689          230 PVKDVAKAQVLLFESPAASGRYLC-TNGIYQFGDFAERVSKLF  271 (278)
Q Consensus       230 ~~~D~a~~~~~~~~~~~~~~~~~~-~~~~~s~~e~~~~i~~~~  271 (278)
                      |++|+|+++..++++...++.|++ +++..++.|+++.+.+.+
T Consensus       235 ~v~D~a~ai~~~~~~~~~~~~~Ni~s~~~~s~~~~~~~i~~~~  277 (361)
T d1kewa_         235 YVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLL  277 (361)
T ss_dssp             EHHHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHH
T ss_pred             EHHHHHHHHHHHHhcCCCCCeEEECCCCCcchHHHHhHhhhhc
Confidence            999999999999998777678855 567899999999998754

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.6e-41  Score=277.38  Aligned_cols=249  Identities=22%  Similarity=0.287  Sum_probs=190.7

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCC-CCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEec
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS-DSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~-~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a   88 (278)
                      |||||||||||||++|+++|+++|+ +|+++++... ..+.+......  ..+.+...|+.     ..++.++|+|||+|
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~-~V~~~d~~~~~~~~~~~~~~~~--~~~d~~~~~~~-----~~~~~~~d~VihlA   73 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGH-EVTVVDNFFTGRKRNVEHWIGH--ENFELINHDVV-----EPLYIEVDQIYHLA   73 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCGGGTGGGTTC--TTEEEEECCTT-----SCCCCCCSEEEECC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCCcCCHHHHHHhcCC--CceEEEehHHH-----HHHHcCCCEEEECc
Confidence            7999999999999999999999999 8998876322 22222221111  14555555554     44567899999999


Q ss_pred             ccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhhHH
Q 023689           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK  168 (278)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK  168 (278)
                      +......+..++...+++|+.|+.+++++|++.++ ++|++||++++ +.+..  .+.+|+...... +..+.++|+.+|
T Consensus        74 a~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~~-k~I~~SS~~vy-~~~~~--~~~~e~~~~~~~-~~~p~~~Y~~sK  148 (312)
T d2b69a1          74 SPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVY-GDPEV--HPQSEDYWGHVN-PIGPRACYDEGK  148 (312)
T ss_dssp             SCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGG-BSCSS--SSBCTTCCCBCC-SSSTTHHHHHHH
T ss_pred             ccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEEChhee-cCCCC--CCCCccccCCCC-CCCCccHHHHHH
Confidence            97665334456788899999999999999999886 79999986554 44332  455665432221 123347899999


Q ss_pred             HHHHHHHHHHHHhcCCceEEEecceeeCCCCCCC-CchhHHHHHHHhhCCCCcc---cccccCcccHHHHHHHHHhhhcC
Q 023689          169 TLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY-LNASCAVLQQLLQGSKDTQ---EYHWLGAVPVKDVAKAQVLLFES  244 (278)
Q Consensus       169 ~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~D~a~~~~~~~~~  244 (278)
                      .++|.+++.+++++|++++++||++||||..... ...+..++.++..|+++.+   +.+.++++|++|+|++++.++++
T Consensus       149 ~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~~~~~~~  228 (312)
T d2b69a1         149 RVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNS  228 (312)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHHHHHHhh
Confidence            9999999999999999999999999999986654 3467788889999988765   34789999999999999998876


Q ss_pred             CCCCceE-EecCccccHHHHHHHHHHhCC
Q 023689          245 PAASGRY-LCTNGIYQFGDFAERVSKLFP  272 (278)
Q Consensus       245 ~~~~~~~-~~~~~~~s~~e~~~~i~~~~~  272 (278)
                      . ..+.| +++++.+++.++++.+++.++
T Consensus       229 ~-~~~~~n~~~~~~~~~~~~~~~i~~~~~  256 (312)
T d2b69a1         229 N-VSSPVNLGNPEEHTILEFAQLIKNLVG  256 (312)
T ss_dssp             S-CCSCEEESCCCEEEHHHHHHHHHHHHT
T ss_pred             c-cCCceEecCCcccchhhHHHHHHHHhC
Confidence            5 34566 556789999999999999874

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=9.5e-39  Score=268.82  Aligned_cols=257  Identities=16%  Similarity=0.219  Sum_probs=197.9

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCC-CcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~-~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      +||+|||||||||||++|+++|+++|+ .|.++.++... ......+......+++++.+|++|.+.+.++++++|.|+|
T Consensus         1 ~~mkILVTGgtGfIGs~lv~~L~~~g~-~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~~~~~v~~   79 (346)
T d1oc2a_           1 QFKNIIVTGGAGFIGSNFVHYVYNNHP-DVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVH   79 (346)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHCT-TCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred             CcCEEEEeCCCcHHHHHHHHHHHHCCC-CeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHhhhhhhhh
Confidence            589999999999999999999999998 55555443211 1111111111223899999999999999999999999999


Q ss_pred             ecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCC---------CCccccCCCCCchhhh
Q 023689           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGW---------KGKVFDETSWTDLEYC  157 (278)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~---------~~~~~~E~~~~~~~~~  157 (278)
                      +|+......+..++.+.+++|+.|+.+++++|+..+. ++|++||.+.++..+..         .....+|+++..|   
T Consensus        80 ~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~~-k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p---  155 (346)
T d1oc2a_          80 YAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNP---  155 (346)
T ss_dssp             CCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCC---
T ss_pred             hhhcccccchhhCcccceeeehHhHHhhhhhhccccc-cccccccceEecccCccccccccccCcccccccCCCCCC---
Confidence            9987665333345678899999999999999999984 78888886654321110         1233444444333   


Q ss_pred             hccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcc---cccccCcccHHHH
Q 023689          158 KSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ---EYHWLGAVPVKDV  234 (278)
Q Consensus       158 ~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~D~  234 (278)
                         .+.|+.+|.++|.+++.++++++++++++||+++|||..... .....++.....+.++..   +.+.++++|++|+
T Consensus       156 ---~s~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~-~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~  231 (346)
T d1oc2a_         156 ---SSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIE-KFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDH  231 (346)
T ss_dssp             ---CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTT-SHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHH
T ss_pred             ---CCHHHHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCcc-chhHHHHHHHHcCCceeEeCCCCccccccchhhH
Confidence               378999999999999999999999999999999999976543 455666667777776654   4589999999999


Q ss_pred             HHHHHhhhcCCCCCceE-EecCccccHHHHHHHHHHhCCC
Q 023689          235 AKAQVLLFESPAASGRY-LCTNGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       235 a~~~~~~~~~~~~~~~~-~~~~~~~s~~e~~~~i~~~~~~  273 (278)
                      |++++.++.++..++.| +++++..++.++++.+.+.++.
T Consensus       232 a~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  271 (346)
T d1oc2a_         232 STGVWAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQ  271 (346)
T ss_dssp             HHHHHHHHHHCCTTCEEEECCSCEEEHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHhhcccCccccccccccccchHHHHHHHHHhCC
Confidence            99999999888777765 6678899999999999998854

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=1.3e-38  Score=267.45  Aligned_cols=255  Identities=17%  Similarity=0.159  Sum_probs=205.3

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCC-cc---cccCC-CCCCCceEEEEccCCChhhHHHHhcCcc
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-SH---LFALP-GAGDANLRVFEADVLDSGAVSRAVEGCK   82 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~-~~---~~~~~-~~~~~~v~~~~~Dl~d~~~~~~~~~~~d   82 (278)
                      ++|+|||||||||||++|+++|++.|+ +|++++|..... ..   ..... .....+++++.+|+.|...+.......+
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~~   93 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQ-KVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVD   93 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCS
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccccccc
Confidence            458999999999999999999999999 899998733221 11   11110 0011278999999999999999999999


Q ss_pred             EEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCc
Q 023689           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK  162 (278)
Q Consensus        83 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  162 (278)
                      .++|+++......+..++...+++|+.|+.+++++|++.++++||++||.+.+ +...  ..+.+|+++..|.      +
T Consensus        94 ~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vy-g~~~--~~~~~E~~~~~p~------~  164 (341)
T d1sb8a_          94 YVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTY-GDHP--GLPKVEDTIGKPL------S  164 (341)
T ss_dssp             EEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGG-TTCC--CSSBCTTCCCCCC------S
T ss_pred             ccccccccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceee-CCCC--CCCccCCCCCCCC------C
Confidence            99999986554334456678999999999999999999999999999986654 4333  3678999887764      7


Q ss_pred             hhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCC---CchhHHHHHHHhhCCCCcc---cccccCcccHHHHHH
Q 023689          163 WYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY---LNASCAVLQQLLQGSKDTQ---EYHWLGAVPVKDVAK  236 (278)
Q Consensus       163 ~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~---~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~D~a~  236 (278)
                      .|+.+|.++|+++..++++.+++++++||+++||+...+.   ...+..++.++..|.+..+   +.+.++++|++|+|.
T Consensus       165 ~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~  244 (341)
T d1sb8a_         165 PYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQ  244 (341)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccch
Confidence            8999999999999999999999999999999999986544   2456788888999988765   347899999999999


Q ss_pred             HHHhhhcCCCC--CceEEe-cCccccHHHHHHHHHHhCC
Q 023689          237 AQVLLFESPAA--SGRYLC-TNGIYQFGDFAERVSKLFP  272 (278)
Q Consensus       237 ~~~~~~~~~~~--~~~~~~-~~~~~s~~e~~~~i~~~~~  272 (278)
                      ++..++.....  .+.|++ +++.+|+.|+++.|.+.++
T Consensus       245 a~~~~~~~~~~~~~~~~~~~~~~~~si~~i~~~i~~~~~  283 (341)
T d1sb8a_         245 ANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLA  283 (341)
T ss_dssp             HHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHH
T ss_pred             hhhhhhhccccccceeeeecccccchHHHHHHHHHHHhc
Confidence            99988876533  336755 5678999999999998764

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=2.4e-38  Score=263.65  Aligned_cols=252  Identities=18%  Similarity=0.145  Sum_probs=198.0

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCc--ccccCCCCCCCceEEEEccCCChhhHHHHhcC--ccEEE
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS--HLFALPGAGDANLRVFEADVLDSGAVSRAVEG--CKGVF   85 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~--~d~vi   85 (278)
                      |+|||||||||||++|+++|+++|+ +|++++|......  .+..+...  .+++++++|++|.+.+.+.+..  .++++
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~l~~~~~~--~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~   77 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGY-RVHGLVARRSSDTRWRLRELGIE--GDIQYEDGDMADACSVQRAVIKAQPQEVY   77 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSSCCCHHHHHTTCG--GGEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcC-EEEEEECCCCcccHHHHHHhccc--CCcEEEEccccChHHhhhhhccccccccc
Confidence            6899999999999999999999999 9999998664322  22222211  2799999999999999988774  57888


Q ss_pred             EecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhh
Q 023689           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYP  165 (278)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~  165 (278)
                      |+|+.........+....++.|+.|+.+++++|++.+.+++++.+|+.++|+...  ....+|+++..|.      +.|+
T Consensus        78 ~~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~--~~~~~E~~~~~p~------~~Y~  149 (321)
T d1rpna_          78 NLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQ--AERQDENTPFYPR------SPYG  149 (321)
T ss_dssp             ECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCS--SSSBCTTSCCCCC------SHHH
T ss_pred             cccccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCccc--CCCCCCCCCcccc------ChhH
Confidence            8887655544456678889999999999999999998665444455577776544  3667888877664      7899


Q ss_pred             hHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCC--chhHHHHHHHhhCCCCc--c--cccccCcccHHHHHHHHH
Q 023689          166 VSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL--NASCAVLQQLLQGSKDT--Q--EYHWLGAVPVKDVAKAQV  239 (278)
Q Consensus       166 ~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~--~--~~~~~~~i~~~D~a~~~~  239 (278)
                      .+|.++|.++..++++++++++++||+++|||......  ..+...+.+...+....  .  +++.++++|++|+|+++.
T Consensus       150 ~sK~~~E~~~~~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~~  229 (321)
T d1rpna_         150 VAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMW  229 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHHH
Confidence            99999999999999999999999999999999754442  23445555555554333  2  457899999999999999


Q ss_pred             hhhcCCCCCceEEecCccccHHHHHHHHHHhCC
Q 023689          240 LLFESPAASGRYLCTNGIYQFGDFAERVSKLFP  272 (278)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~~  272 (278)
                      .++.++.....++.+++..++.++++.+.+.++
T Consensus       230 ~~~~~~~~~~~ni~~~~~~s~~~~~~~~~~~~~  262 (321)
T d1rpna_         230 LMLQQDKADDYVVATGVTTTVRDMCQIAFEHVG  262 (321)
T ss_dssp             HHHHSSSCCCEEECCSCEEEHHHHHHHHHHTTT
T ss_pred             HHHhcCCcCCceecccccceehhhhHHHHHHhC
Confidence            999987654445677889999999999999874

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=100.00  E-value=3.2e-38  Score=265.14  Aligned_cols=266  Identities=27%  Similarity=0.373  Sum_probs=203.7

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCC--CCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPG--AGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~--~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      .||+|||||||||||++|+++|+++|+ .|++++|+..+...+.....  ........+.+|++|.+++.+++.++|+|+
T Consensus        10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~-~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~v~   88 (342)
T d1y1pa1          10 EGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVA   88 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEE
T ss_pred             CcCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccchhhh
Confidence            379999999999999999999999999 89999987654433322110  011145568899999999999999999999


Q ss_pred             EecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhc-CCCEEEEecceeeeecCC-CCCCccccCCCCCchhh-------
Q 023689           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-GVRRVVVTSSISAIVPNP-GWKGKVFDETSWTDLEY-------  156 (278)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~v~~Ss~~~~~~~~-~~~~~~~~E~~~~~~~~-------  156 (278)
                      |+|+....   .......+++|+.||.+++++|++. ++++||++||+.+.+... .......+|+.+.....       
T Consensus        89 ~~a~~~~~---~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~  165 (342)
T d1y1pa1          89 HIASVVSF---SNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLP  165 (342)
T ss_dssp             ECCCCCSC---CSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSC
T ss_pred             hhcccccc---cccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCcccccccccccccccccccc
Confidence            99987553   3456778899999999999999886 699999999976655432 22234444443322111       


Q ss_pred             ---hhccCchhhhHHHHHHHHHHHHHHhc--CCceEEEecceeeCCCCCCC--CchhHHHHHHHhhCCCCcc--cccccC
Q 023689          157 ---CKSRKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQPY--LNASCAVLQQLLQGSKDTQ--EYHWLG  227 (278)
Q Consensus       157 ---~~~~~~~y~~sK~~~e~~~~~~~~~~--~~~~~~lrp~~i~g~~~~~~--~~~~~~~~~~~~~~~~~~~--~~~~~~  227 (278)
                         ...+...|+.+|..+|.+++.|++++  +++++++||+.+|||...+.  ......++.++..+.....  +.+.++
T Consensus       166 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~  245 (342)
T d1y1pa1         166 ESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQY  245 (342)
T ss_dssp             TTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTCCSEE
T ss_pred             ccCCCCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcCcccCCcccee
Confidence               11122579999999999999998876  57788999999999965433  3456777788888776544  457789


Q ss_pred             cccHHHHHHHHHhhhcCCCCCc-eEEecCccccHHHHHHHHHHhCCCCCCC
Q 023689          228 AVPVKDVAKAQVLLFESPAASG-RYLCTNGIYQFGDFAERVSKLFPEFPVH  277 (278)
Q Consensus       228 ~i~~~D~a~~~~~~~~~~~~~~-~~~~~~~~~s~~e~~~~i~~~~~~~~~p  277 (278)
                      ++|++|+|++++.+++++...| .|+++++.+++.|+++.|.+.+|+..+|
T Consensus       246 ~v~v~Dva~~~i~~l~~~~~~g~~~~~~~~~~t~~eia~~i~k~~p~~~~~  296 (342)
T d1y1pa1         246 YVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKTFP  296 (342)
T ss_dssp             EEEHHHHHHHHHHHHHCTTCCSCEEEECCEEECHHHHHHHHHHHCTTSCCC
T ss_pred             eeeHHHHHHHHHHhhcCccccceEEEEcCCceEHHHHHHHHHHHcCCCcCC
Confidence            9999999999999999887777 4677888999999999999999876655

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=2.7e-37  Score=261.52  Aligned_cols=254  Identities=14%  Similarity=0.116  Sum_probs=191.3

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEe
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~   87 (278)
                      +.|||||||||||||++|+++|+++|+ .|+++++...........      ..++..+|+++.+.+.++++++|+|||+
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~-~V~~~d~~~~~~~~~~~~------~~~~~~~D~~~~~~~~~~~~~~d~Vih~   86 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGH-YVIASDWKKNEHMTEDMF------CDEFHLVDLRVMENCLKVTEGVDHVFNL   86 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCSSSCGGGT------CSEEEECCTTSHHHHHHHHTTCSEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEeCCCccchhhhcc------cCcEEEeechhHHHHHHHhhcCCeEeec
Confidence            357899999999999999999999999 888887654432211111      6688899999999999999999999999


Q ss_pred             cccCCCCC-CCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCc-hhhhhccCchhh
Q 023689           88 ASPCTLED-PVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD-LEYCKSRKKWYP  165 (278)
Q Consensus        88 a~~~~~~~-~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~-~~~~~~~~~~y~  165 (278)
                      |+...... ....+...+..|+.++.+++++|++.++++||++||...+.....   .+.+|..... ...+..+.+.|+
T Consensus        87 a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~---~~~~~~~~~~~e~~~~~p~~~Yg  163 (363)
T d2c5aa1          87 AADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQ---LETTNVSLKESDAWPAEPQDAFG  163 (363)
T ss_dssp             CCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGS---SSSSSCEECGGGGSSBCCSSHHH
T ss_pred             ccccccccccccccccccccccchhhHHHHhHHhhCcccccccccccccccccc---ccccccccccccCCcCCCCCHHH
Confidence            98755421 245677889999999999999999999999999999666544322   2233322111 112233447899


Q ss_pred             hHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCC---chh-HHHHHHHhhCCCCcc---cccccCcccHHHHHHHH
Q 023689          166 VSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL---NAS-CAVLQQLLQGSKDTQ---EYHWLGAVPVKDVAKAQ  238 (278)
Q Consensus       166 ~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~---~~~-~~~~~~~~~~~~~~~---~~~~~~~i~~~D~a~~~  238 (278)
                      .+|.++|++++.+.+++|++++++||+++||+......   ... ...........+...   +.+.++++|++|+++++
T Consensus       164 ~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~~~~  243 (363)
T d2c5aa1         164 LEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGV  243 (363)
T ss_dssp             HHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEeehhHHHHHH
Confidence            99999999999999999999999999999999765431   112 222222233333222   34789999999999999


Q ss_pred             HhhhcCCCCCceE-EecCccccHHHHHHHHHHhCC
Q 023689          239 VLLFESPAASGRY-LCTNGIYQFGDFAERVSKLFP  272 (278)
Q Consensus       239 ~~~~~~~~~~~~~-~~~~~~~s~~e~~~~i~~~~~  272 (278)
                      +.++++. .++.| +++++.+++.|+++.+.+..+
T Consensus       244 ~~~~~~~-~~~~~ni~~~~~~s~~~l~~~i~~~~g  277 (363)
T d2c5aa1         244 LRLTKSD-FREPVNIGSDEMVSMNEMAEMVLSFEE  277 (363)
T ss_dssp             HHHHHSS-CCSCEEECCCCCEEHHHHHHHHHHTTT
T ss_pred             HHHHhCC-CCCeEEEecCCcccHHHHHHHHHHHhC
Confidence            9998765 44566 567889999999999999875

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.1e-37  Score=258.79  Aligned_cols=254  Identities=17%  Similarity=0.133  Sum_probs=193.2

Q ss_pred             ceE-EEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCC--cccccCC----CCCCCceEEEEccCCChhhHHHHhc--C
Q 023689           10 ETV-CVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS--SHLFALP----GAGDANLRVFEADVLDSGAVSRAVE--G   80 (278)
Q Consensus        10 ~~v-lItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~--~~~~~~~----~~~~~~v~~~~~Dl~d~~~~~~~~~--~   80 (278)
                      ||| ||||||||||++|+++|+++|+ +|++++|..+..  ..+..+.    .....+++++.+|++|++.+.+++.  +
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~-~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~   79 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGY-EVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVK   79 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHC
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcC-EEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhcc
Confidence            578 9999999999999999999999 999999865421  1111111    1112278999999999999999987  4


Q ss_pred             ccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCC---CEEEEecceeeeecCCCCCCccccCCCCCchhhh
Q 023689           81 CKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV---RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYC  157 (278)
Q Consensus        81 ~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~---~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~  157 (278)
                      +++++|+++..............+++|+.||.+++++|++.++   ++||++||.+ +|+.+.  ..+++|+++..|.  
T Consensus        80 ~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~-vyg~~~--~~~~~E~~~~~P~--  154 (347)
T d1t2aa_          80 PTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSE-LYGKVQ--EIPQKETTPFYPR--  154 (347)
T ss_dssp             CSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGG-GTCSCS--SSSBCTTSCCCCC--
T ss_pred             cceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchh-eecCCC--CCCCCCCCCCCCC--
Confidence            6799999987554333445677789999999999999998864   4799999855 455433  3678999887664  


Q ss_pred             hccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCC--c-hhHHHHHHHhhCCCCcc---cccccCcccH
Q 023689          158 KSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL--N-ASCAVLQQLLQGSKDTQ---EYHWLGAVPV  231 (278)
Q Consensus       158 ~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~--~-~~~~~~~~~~~~~~~~~---~~~~~~~i~~  231 (278)
                          ++|+.||.++|++++.++++++++++++||+++|||......  . ....++.....+.+...   +.+.++++|+
T Consensus       155 ----~~Yg~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v  230 (347)
T d1t2aa_         155 ----SPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHA  230 (347)
T ss_dssp             ----SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEH
T ss_pred             ----CHHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeeeEe
Confidence                789999999999999999999999999999999999755442  1 22233333344444332   4478999999


Q ss_pred             HHHHHHHHhhhcCCCCCceEEecCccccHHHHHHHHHHhCCC
Q 023689          232 KDVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       232 ~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~~~  273 (278)
                      +|+++++..++++......++......++.+..+.+....++
T Consensus       231 ~D~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (347)
T d1t2aa_         231 KDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGK  272 (347)
T ss_dssp             HHHHHHHHHHHHSSSCCCEEECCSCCEEHHHHHHHHHHHTTC
T ss_pred             cHHHHHHHHHhhcCCCccceeccccccccchhhhhhhhhhcc
Confidence            999999999999876544456667788999999888877643

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=4.6e-37  Score=258.05  Aligned_cols=254  Identities=18%  Similarity=0.253  Sum_probs=193.7

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHH-HhcCccEEEEec
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSR-AVEGCKGVFHVA   88 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~-~~~~~d~vi~~a   88 (278)
                      |||||||||||||++|+++|+++|+.+|+++++.......+..     ..+++++++|+++.+.+.+ +.+++|+|||+|
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~-----~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a   75 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN-----HPHFHFVEGDISIHSEWIEYHVKKCDVVLPLV   75 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTT-----CTTEEEEECCTTTCSHHHHHHHHHCSEEEECB
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhcc-----CCCeEEEECccCChHHHHHHHHhCCCcccccc
Confidence            5899999999999999999999996589998875543333322     1289999999998866655 677899999999


Q ss_pred             ccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchh-hhhccCchhhhH
Q 023689           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLE-YCKSRKKWYPVS  167 (278)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~-~~~~~~~~y~~s  167 (278)
                      +........++....+++|+.|+.+++++|++.+. ++++.||...++....   ....|..+..+. ....+...|+.+
T Consensus        76 ~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~-~~~~~ss~~~~~~~~~---~~~~~~~~~~~~~~~~~p~~~Y~~s  151 (342)
T d2blla1          76 AIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRK-RIIFPSTSEVYGMCSD---KYFDEDHSNLIVGPVNKPRWIYSVS  151 (342)
T ss_dssp             CCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTC-EEEEECCGGGGBTCCC---SSBCTTTCCCBCCCTTCGGGHHHHH
T ss_pred             ccccccccccCCccccccccccccccccccccccc-cccccccccccccccc---cccccccccccccccCCCcchhhhc
Confidence            97665333445568899999999999999999986 5567787565554433   333333222111 112234689999


Q ss_pred             HHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCC-------CchhHHHHHHHhhCCCCcc---cccccCcccHHHHHHH
Q 023689          168 KTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY-------LNASCAVLQQLLQGSKDTQ---EYHWLGAVPVKDVAKA  237 (278)
Q Consensus       168 K~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~-------~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~D~a~~  237 (278)
                      |.++|+++..+++++|++++++||+.+||+.....       ......++.+++.|.++.+   +++.++++|++|+|++
T Consensus       152 K~~~E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a  231 (342)
T d2blla1         152 KQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEA  231 (342)
T ss_dssp             HHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHH
T ss_pred             ccchhhhhhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeecccccccce
Confidence            99999999999999999999999999999865432       2346778888888988765   3578999999999999


Q ss_pred             HHhhhcCCC--CCc-eEEec-Cc-cccHHHHHHHHHHhCC
Q 023689          238 QVLLFESPA--ASG-RYLCT-NG-IYQFGDFAERVSKLFP  272 (278)
Q Consensus       238 ~~~~~~~~~--~~~-~~~~~-~~-~~s~~e~~~~i~~~~~  272 (278)
                      +..+++++.  ..| .|+++ ++ .+|++|+++.+.+.++
T Consensus       232 ~~~~~~~~~~~~~g~~~Nig~~~~~~t~~~l~~~i~~~~~  271 (342)
T d2blla1         232 LYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFE  271 (342)
T ss_dssp             HHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHH
T ss_pred             eeeehhhccccCCCeEEEEecccchhHHHHHHHHHHHHhC
Confidence            999998753  223 68664 54 5899999999988763

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=6.8e-38  Score=267.93  Aligned_cols=263  Identities=17%  Similarity=0.161  Sum_probs=189.4

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEec----------CCCCCcc-------cccCCCCCCCceEEEEccCCCh
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVF----------PGSDSSH-------LFALPGAGDANLRVFEADVLDS   71 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r----------~~~~~~~-------~~~~~~~~~~~v~~~~~Dl~d~   71 (278)
                      ||||||||||||||++|+++|++.|+ .|++++.          .......       +.........+++++++|++|.
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~-~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~   79 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNY-EVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDF   79 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCH
Confidence            68999999999999999999999999 8988751          0000000       0000000112789999999999


Q ss_pred             hhHHHHhcC--ccEEEEecccCCCCCCC---CchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCC----C
Q 023689           72 GAVSRAVEG--CKGVFHVASPCTLEDPV---DPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGW----K  142 (278)
Q Consensus        72 ~~~~~~~~~--~d~vi~~a~~~~~~~~~---~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~----~  142 (278)
                      +.+.+++++  +|+|||+|+......+.   ......+++|+.|+.+++++|++.+.+++++.+|..++++....    .
T Consensus        80 ~~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~~  159 (393)
T d1i24a_          80 EFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEG  159 (393)
T ss_dssp             HHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCBCSS
T ss_pred             HHHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeeccccccccccccccccc
Confidence            999999984  69999999875542211   23456789999999999999999886655444444555554321    0


Q ss_pred             CccccCCCCCch-hhhhccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCC----------------Cch
Q 023689          143 GKVFDETSWTDL-EYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY----------------LNA  205 (278)
Q Consensus       143 ~~~~~E~~~~~~-~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~----------------~~~  205 (278)
                      .....|+..... .++..+.+.|+.+|.++|.++..++++++++++++||+++||+.....                ...
T Consensus       160 ~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  239 (393)
T d1i24a_         160 YITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTA  239 (393)
T ss_dssp             EEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCH
T ss_pred             cccccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCccccccccccccccccccccccc
Confidence            011111111100 112344578999999999999999999999999999999999975432                124


Q ss_pred             hHHHHHHHhhCCCCcc---cccccCcccHHHHHHHHHhhhcCCCCCceE---EecCccccHHHHHHHHHHhCC
Q 023689          206 SCAVLQQLLQGSKDTQ---EYHWLGAVPVKDVAKAQVLLFESPAASGRY---LCTNGIYQFGDFAERVSKLFP  272 (278)
Q Consensus       206 ~~~~~~~~~~~~~~~~---~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~---~~~~~~~s~~e~~~~i~~~~~  272 (278)
                      +..++.+...+.++.+   +.+.++|+|++|+++++..++++....|.+   +.+++.+|+.|+++.+.+..+
T Consensus       240 i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~~g~~~~~~~~~~~~si~el~~~i~~~~~  312 (393)
T d1i24a_         240 LNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKAGS  312 (393)
T ss_dssp             HHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHHHH
T ss_pred             hhhhhHHhhcCCeeEEeeecccccccccccchHHHHHHHHHhhcccceeeeecCCCCeeEHHHHHHHHHHHHH
Confidence            5677788888888765   447899999999999999999987776643   355678999999999988753

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.5e-37  Score=259.23  Aligned_cols=254  Identities=19%  Similarity=0.146  Sum_probs=185.4

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCc-ccccCCCCCCCceEEEEccCCChhhHHHHhc--CccEEEE
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS-HLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFH   86 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~-~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vi~   86 (278)
                      |||||||||||||++|++.|+++|+ +|++++|-..... ...........+++++++|++|.+.+.++++  ++|+|||
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViH   79 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNGH-DVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIH   79 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcC-EEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEE
Confidence            5799999999999999999999999 8999876332211 1111100111279999999999999999998  7899999


Q ss_pred             ecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhh
Q 023689           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPV  166 (278)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~  166 (278)
                      +|+.........++...+++|+.|+.+++++|++.++++||++||.+++.....   .+..|+++..     .+...|+.
T Consensus        80 lAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~~---~~~~e~~~~~-----~p~~~Y~~  151 (338)
T d1udca_          80 FAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPK---IPYVESFPTG-----TPQSPYGK  151 (338)
T ss_dssp             CCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCS---SSBCTTSCCC-----CCSSHHHH
T ss_pred             CCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEccccc---cccccccccC-----CCcchHHH
Confidence            999755432334567899999999999999999999999999998665543332   3344443221     22378999


Q ss_pred             HHHHHHHHHHHHHHh-cCCceEEEecceeeCCCCCCC---------CchhHHHHHHHhhCC-CCcc---------ccccc
Q 023689          167 SKTLAEKAAWEFAEK-HGVDVVAIHPATCLGPLMQPY---------LNASCAVLQQLLQGS-KDTQ---------EYHWL  226 (278)
Q Consensus       167 sK~~~e~~~~~~~~~-~~~~~~~lrp~~i~g~~~~~~---------~~~~~~~~~~~~~~~-~~~~---------~~~~~  226 (278)
                      +|..+|+++.++.++ .+++++++||+.+||+.....         ...+..++.....+. ++.+         +.+.+
T Consensus       152 sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~r  231 (338)
T d1udca_         152 SKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVR  231 (338)
T ss_dssp             HHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEE
T ss_pred             HHhhhhHHHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCcee
Confidence            999999999877765 489999999999999865422         123344444444332 2221         34679


Q ss_pred             CcccHHHHHHHHHhhhcCCCC---CceEEe-cCccccHHHHHHHHHHhCC
Q 023689          227 GAVPVKDVAKAQVLLFESPAA---SGRYLC-TNGIYQFGDFAERVSKLFP  272 (278)
Q Consensus       227 ~~i~~~D~a~~~~~~~~~~~~---~~~~~~-~~~~~s~~e~~~~i~~~~~  272 (278)
                      +++|++|++.+...+......   .++|++ +++++|+.|+++.+.+.++
T Consensus       232 d~i~v~D~~~~~~~~~~~~~~~~~~~i~Ni~~~~~~si~e~~~~i~~~~g  281 (338)
T d1udca_         232 DYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACG  281 (338)
T ss_dssp             CEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSSCEEHHHHHHHHHHHHT
T ss_pred             eEEEEeehhhhccccccccccccCcceeeecCCCCCcHHHHHHHHHHHHC
Confidence            999999999888776654322   235765 4678999999999999874

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=5.3e-36  Score=251.14  Aligned_cols=252  Identities=15%  Similarity=0.130  Sum_probs=192.0

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCC--CcccccCC----CCCCCceEEEEccCCChhhHHHHhc--Cc
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD--SSHLFALP----GAGDANLRVFEADVLDSGAVSRAVE--GC   81 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~--~~~~~~~~----~~~~~~v~~~~~Dl~d~~~~~~~~~--~~   81 (278)
                      |++||||||||||++|+++|+++|| +|++++|..+.  ...+..+.    ......++++.+|+++.+.+.+.++  ++
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~   80 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGY-EVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKP   80 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcC-EEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhcc
Confidence            7999999999999999999999999 99999985432  11111111    1122378899999999999999886  57


Q ss_pred             cEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhc-----CCCEEEEecceeeeecCCCCCCccccCCCCCchhh
Q 023689           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-----GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEY  156 (278)
Q Consensus        82 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-----~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~  156 (278)
                      |+|||+|+........+.+...++.|+.++.++++++++.     ...++++.|| +.+++..   ...++|+++..|. 
T Consensus        81 D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss-~~~~~~~---~~~~~E~~~~~p~-  155 (339)
T d1n7ha_          81 DEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGS-SEMFGST---PPPQSETTPFHPR-  155 (339)
T ss_dssp             SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEE-GGGGTTS---CSSBCTTSCCCCC-
T ss_pred             chhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeeccc-ceecccC---CCCCCCCCCCCCc-
Confidence            9999999875543333456788999999999999998764     2335666555 4343332   2568898877664 


Q ss_pred             hhccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCC--chhHHHHHHHhhCC-CCc-c--cccccCccc
Q 023689          157 CKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL--NASCAVLQQLLQGS-KDT-Q--EYHWLGAVP  230 (278)
Q Consensus       157 ~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~--~~~~~~~~~~~~~~-~~~-~--~~~~~~~i~  230 (278)
                           +.|+.+|..+|.++..++++++++++++||++||||......  ..+...+.....+. +.. .  +.+.++++|
T Consensus       156 -----~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~  230 (339)
T d1n7ha_         156 -----SPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGF  230 (339)
T ss_dssp             -----SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEE
T ss_pred             -----chhhHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCcccccee
Confidence                 789999999999999999999999999999999999765442  22333333333333 322 2  347899999


Q ss_pred             HHHHHHHHHhhhcCCCCCceEEecCccccHHHHHHHHHHhCC
Q 023689          231 VKDVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFP  272 (278)
Q Consensus       231 ~~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~~  272 (278)
                      ++|+|+++..+++++...+.++..+...++.++++.+.+.++
T Consensus       231 v~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~  272 (339)
T d1n7ha_         231 AGDYVEAMWLMLQQEKPDDYVVATEEGHTVEEFLDVSFGYLG  272 (339)
T ss_dssp             HHHHHHHHHHHHTSSSCCEEEECCSCEEEHHHHHHHHHHHTT
T ss_pred             eehHHHHHHHHHhcCCCCccccccccccccchhhhhhhhhhh
Confidence            999999999999988776677888899999999999999875

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=100.00  E-value=6.4e-35  Score=248.54  Aligned_cols=257  Identities=19%  Similarity=0.165  Sum_probs=186.9

Q ss_pred             CceEEEeCcchhhHHHHHHHHHH-CCCCeEEEEecCC---CCCcccc--------------cCCCCCCCceEEEEccCCC
Q 023689            9 EETVCVTGANGFIGTWLVKTLLD-NNYTSINATVFPG---SDSSHLF--------------ALPGAGDANLRVFEADVLD   70 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~-~g~~~v~~~~r~~---~~~~~~~--------------~~~~~~~~~v~~~~~Dl~d   70 (278)
                      .|||||||||||||++|+++|++ .|+ +|+++++-.   .......              .........+.++.+|++|
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~-~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d   80 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNH-SVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRN   80 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCC-EEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTC
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCC-EEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccC
Confidence            46999999999999999999996 577 899886411   1110000              0011112268899999999


Q ss_pred             hhhHHHHhc---CccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCC----CC
Q 023689           71 SGAVSRAVE---GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGW----KG  143 (278)
Q Consensus        71 ~~~~~~~~~---~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~----~~  143 (278)
                      .+.+.++++   ++|+|||+|+........+.....+++|+.++.++++++++.++++++++||...+......    ..
T Consensus        81 ~~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~  160 (383)
T d1gy8a_          81 EDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNA  160 (383)
T ss_dssp             HHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CC
T ss_pred             HHHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccCCcccccccccccccccccccccccc
Confidence            999999886   57999999997665333445677899999999999999999999999999886665543322    22


Q ss_pred             ccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCC--------chhHHHHHHHhh
Q 023689          144 KVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL--------NASCAVLQQLLQ  215 (278)
Q Consensus       144 ~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~--------~~~~~~~~~~~~  215 (278)
                      .++.|+++..|      .+.|+.+|..+|++++.+.+.+|++++++||+++|||......        ..++.++.+...
T Consensus       161 ~~~~e~~~~~p------~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~  234 (383)
T d1gy8a_         161 EPIDINAKKSP------ESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMS  234 (383)
T ss_dssp             CCBCTTSCCBC------SSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHH
T ss_pred             cccccccCCCC------CCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHHHHHh
Confidence            34555554444      3789999999999999999999999999999999999876432        123333333321


Q ss_pred             ----CC------------CCcc---------cccccCcccHHHHHHHHHhhhcCCC---------CCceEEe-cCccccH
Q 023689          216 ----GS------------KDTQ---------EYHWLGAVPVKDVAKAQVLLFESPA---------ASGRYLC-TNGIYQF  260 (278)
Q Consensus       216 ----~~------------~~~~---------~~~~~~~i~~~D~a~~~~~~~~~~~---------~~~~~~~-~~~~~s~  260 (278)
                          +.            +..+         +.+.++++|++|+|++++.+++...         ..++|++ +++++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~~~~s~  314 (383)
T d1gy8a_         235 DIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSV  314 (383)
T ss_dssp             HHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEH
T ss_pred             hccccccchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeCCCCceeH
Confidence                11            1111         3357899999999999998876421         1235755 6789999


Q ss_pred             HHHHHHHHHhCC
Q 023689          261 GDFAERVSKLFP  272 (278)
Q Consensus       261 ~e~~~~i~~~~~  272 (278)
                      .|+++.+.+.++
T Consensus       315 ~el~~~i~~~~~  326 (383)
T d1gy8a_         315 REVIEVARKTTG  326 (383)
T ss_dssp             HHHHHHHHHHHC
T ss_pred             HHHHHHHHHHhC
Confidence            999999999874

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=4.5e-35  Score=246.30  Aligned_cols=256  Identities=15%  Similarity=0.118  Sum_probs=187.3

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCC-CcccccCCCCCCCceEEEEccCCChhhHHHHhc--CccEEEE
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFH   86 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~-~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vi~   86 (278)
                      |.|||||||||||++|+++|+++|+ +|+++++.... .............+++++++|++|.+.+..+++  ++|+|||
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vih   80 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGY-DCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIH   80 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcC-eEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEE
Confidence            5799999999999999999999999 89888753221 211111111111278999999999999999887  7899999


Q ss_pred             ecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCC-CCccccCCCCCchhhhhccCchhh
Q 023689           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGW-KGKVFDETSWTDLEYCKSRKKWYP  165 (278)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~-~~~~~~E~~~~~~~~~~~~~~~y~  165 (278)
                      +|+..........+..++.+|+.|+.+++++|++.++++||++||..+++..... ...+++|+.+..|.      +.|+
T Consensus        81 lAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~------~~Y~  154 (347)
T d1z45a2          81 FAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPT------NPYG  154 (347)
T ss_dssp             CCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCC------SHHH
T ss_pred             ccccccccccccCcccccccchhhhHHHHHHHHhcccceEEeecceeeecCcccCCCCCccccccCCCCC------ChhH
Confidence            9997654333345578899999999999999999999999999997766543322 33567777765553      7899


Q ss_pred             hHHHHHHHHHHHHHHh--cCCceEEEecceeeCCCCCCC--------C-chhHHHHHHHhh-CCCCcc-c--------cc
Q 023689          166 VSKTLAEKAAWEFAEK--HGVDVVAIHPATCLGPLMQPY--------L-NASCAVLQQLLQ-GSKDTQ-E--------YH  224 (278)
Q Consensus       166 ~sK~~~e~~~~~~~~~--~~~~~~~lrp~~i~g~~~~~~--------~-~~~~~~~~~~~~-~~~~~~-~--------~~  224 (278)
                      .+|.++|++++++.+.  .+++++++||+++||+.....        . ..+..++..... +.++.+ +        ..
T Consensus       155 ~sK~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~~  234 (347)
T d1z45a2         155 HTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTP  234 (347)
T ss_dssp             HHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSC
T ss_pred             hHHHHHHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCce
Confidence            9999999999988764  489999999999999754321        1 123333333322 333322 2        25


Q ss_pred             ccCcccHHHHHHHHHhhhcCCC-------CCceEEe-cCccccHHHHHHHHHHhCC
Q 023689          225 WLGAVPVKDVAKAQVLLFESPA-------ASGRYLC-TNGIYQFGDFAERVSKLFP  272 (278)
Q Consensus       225 ~~~~i~~~D~a~~~~~~~~~~~-------~~~~~~~-~~~~~s~~e~~~~i~~~~~  272 (278)
                      .++++++.|++.+++.+++...       ..+.|++ +++++++.|+++.+.+.++
T Consensus       235 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~~~~s~~e~~~~i~~~~~  290 (347)
T d1z45a2         235 IRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASG  290 (347)
T ss_dssp             EECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHT
T ss_pred             eeeeeeeecccccccccccccccccccccccccceecCCCcccHHHHHHHHHHHHC
Confidence            6789999999999888775421       1235755 5779999999999999874

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-34  Score=242.77  Aligned_cols=254  Identities=20%  Similarity=0.169  Sum_probs=183.2

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCC-------cccccCCCCCCCceEEEEccCCChhhHHHHhcC--
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-------SHLFALPGAGDANLRVFEADVLDSGAVSRAVEG--   80 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~-------~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~--   80 (278)
                      |||||||||||||++|+++|++.|+ .|+++++.....       .....+......++.++++|++|.+.+.+++.+  
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~-~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~   81 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGY-LPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYS   81 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTC-CEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcC-EEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccccc
Confidence            6899999999999999999999999 888886522111       111111001112789999999999999998874  


Q ss_pred             ccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhcc
Q 023689           81 CKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSR  160 (278)
Q Consensus        81 ~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  160 (278)
                      +++++|+|+.........++...+++|+.|+.++++++++.++++|+++||...++.....  ....+.....      +
T Consensus        82 ~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~~~--~~~~~~~~~~------~  153 (346)
T d1ek6a_          82 FMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYL--PLDEAHPTGG------C  153 (346)
T ss_dssp             EEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSS--SBCTTSCCCC------C
T ss_pred             cccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcCcccccccccceeeeccccc--cccccccccc------c
Confidence            5689999997665433445678899999999999999999999999999986665543322  2222222111      2


Q ss_pred             CchhhhHHHHHHHHHHHHHHh-cCCceEEEecceeeCCCCCCC--------C-chhHHHHHHHhh-CCCCc---------
Q 023689          161 KKWYPVSKTLAEKAAWEFAEK-HGVDVVAIHPATCLGPLMQPY--------L-NASCAVLQQLLQ-GSKDT---------  220 (278)
Q Consensus       161 ~~~y~~sK~~~e~~~~~~~~~-~~~~~~~lrp~~i~g~~~~~~--------~-~~~~~~~~~~~~-~~~~~---------  220 (278)
                      .++|+.+|..+|+.+..+++. .+++.+++||+.+||+.....        . .....++..... +.+..         
T Consensus       154 ~~~Y~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~  233 (346)
T d1ek6a_         154 TNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTE  233 (346)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSS
T ss_pred             CChHHHHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCC
Confidence            368999999999999988876 499999999999999865321        1 123333333332 22221         


Q ss_pred             ccccccCcccHHHHHHHHHhhhcCCCC---CceEE-ecCccccHHHHHHHHHHhCC
Q 023689          221 QEYHWLGAVPVKDVAKAQVLLFESPAA---SGRYL-CTNGIYQFGDFAERVSKLFP  272 (278)
Q Consensus       221 ~~~~~~~~i~~~D~a~~~~~~~~~~~~---~~~~~-~~~~~~s~~e~~~~i~~~~~  272 (278)
                      .+.+.++++|++|+|.++..++.....   .++|+ ++++.+++.|+++.|.+.++
T Consensus       234 ~g~~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s~~dl~~~i~~~~~  289 (346)
T d1ek6a_         234 DGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASG  289 (346)
T ss_dssp             SSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHC
T ss_pred             CCCeeEeEEEEEeccchhhhhccccccccCceEEEeCCCCcccHHHHHHHHHHHhC
Confidence            134678999999999998887654332   23675 45778999999999999875

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=5.7e-34  Score=236.41  Aligned_cols=238  Identities=15%  Similarity=0.119  Sum_probs=177.7

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc--CccEEEEe
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFHV   87 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vi~~   87 (278)
                      |||||||||||||++|+++|+++|+ .++++++..+                    .|++|.+.+.++++  ++|.|+|+
T Consensus         3 kkIlITG~tGfiG~~l~~~L~~~g~-~vi~~~~~~~--------------------~~~~~~~~~~~~~~~~~~d~v~~~   61 (315)
T d1e6ua_           3 QRVFIAGHRGMVGSAIRRQLEQRGD-VELVLRTRDE--------------------LNLLDSRAVHDFFASERIDQVYLA   61 (315)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTT-EEEECCCTTT--------------------CCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCcC-EEEEecCchh--------------------ccccCHHHHHHHHhhcCCCEEEEc
Confidence            6999999999999999999999999 6665543221                    68899999988876  58999999


Q ss_pred             cccCCCC-CCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhh
Q 023689           88 ASPCTLE-DPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPV  166 (278)
Q Consensus        88 a~~~~~~-~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~  166 (278)
                      |+..... ....+....+++|+.||.+++++|++.++++|||+||++++....   ..+++|+.+....+ ..+.++|+.
T Consensus        62 a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~---~~~~~E~~~~~~~~-~~~~~~Y~~  137 (315)
T d1e6ua_          62 AAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLA---KQPMAESELLQGTL-EPTNEPYAI  137 (315)
T ss_dssp             CCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTC---CSSBCGGGTTSSCC-CGGGHHHHH
T ss_pred             chhccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCC---CCCccCCccccCCC-CCCCCHHHH
Confidence            9765431 112344667889999999999999999999999999977654332   25677765443321 122357999


Q ss_pred             HHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCC---chh-----HHHHHHHhhCCCCcc---cccccCcccHHHHH
Q 023689          167 SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL---NAS-----CAVLQQLLQGSKDTQ---EYHWLGAVPVKDVA  235 (278)
Q Consensus       167 sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~---~~~-----~~~~~~~~~~~~~~~---~~~~~~~i~~~D~a  235 (278)
                      +|.++|++++.+++++|++++++||++||||......   ...     .........+.+...   +.+.++++|++|++
T Consensus       138 sK~~~E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d~~  217 (315)
T d1e6ua_         138 AKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMA  217 (315)
T ss_dssp             HHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEeehhH
Confidence            9999999999999999999999999999999765431   111     122233334444333   34679999999999


Q ss_pred             HHHHhhhcCCCC---------CceE-EecCccccHHHHHHHHHHhCC
Q 023689          236 KAQVLLFESPAA---------SGRY-LCTNGIYQFGDFAERVSKLFP  272 (278)
Q Consensus       236 ~~~~~~~~~~~~---------~~~~-~~~~~~~s~~e~~~~i~~~~~  272 (278)
                      +++..++.+...         .+.+ ...+...++.++++.+.+.++
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~  264 (315)
T d1e6ua_         218 AASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVG  264 (315)
T ss_dssp             HHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHT
T ss_pred             HHHHHhhhhccccccccccccccccccCCCcchHHHHHHHHHHHHhC
Confidence            999999866432         1234 456778999999999998764

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=100.00  E-value=4.5e-34  Score=240.88  Aligned_cols=257  Identities=19%  Similarity=0.182  Sum_probs=196.5

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc--CccEE
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGV   84 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~v   84 (278)
                      +++|||||||||||||++|+++|+++|+ +|++++|+......+.......+ +++++++|++|++.+.++++  .+|+|
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~-~i~~~~~Dl~d~~~l~~~~~~~~~~~v   83 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGA-TVKGYSLTAPTVPSLFETARVAD-GMQSEIGDIRDQNKLLESIREFQPEIV   83 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCSSSSCHHHHTTTTT-TSEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCCCccHHHHhhhhccc-CCeEEEeeccChHhhhhhhhhchhhhh
Confidence            4789999999999999999999999999 89999997766554432222222 79999999999999999987  56999


Q ss_pred             EEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchh
Q 023689           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWY  164 (278)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y  164 (278)
                      +|+|+........+.+...+++|+.|+.++++++++.+..++++.||++.++..... ..+.+|+.+..|.      ++|
T Consensus        84 ~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~-~~~~~~~~~~~p~------~~y  156 (356)
T d1rkxa_          84 FHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEW-IWGYRENEAMGGY------DPY  156 (356)
T ss_dssp             EECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCS-SSCBCTTSCBCCS------SHH
T ss_pred             hhhhccccccccccCCccccccccccchhhhhhhhcccccccccccccccccccccc-ccccccccccCCC------Ccc
Confidence            999987654333456788999999999999999998764554444544555544332 3566666655443      789


Q ss_pred             hhHHHHHHHHHHHHHH---------hcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcc--cccccCcccHHH
Q 023689          165 PVSKTLAEKAAWEFAE---------KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ--EYHWLGAVPVKD  233 (278)
Q Consensus       165 ~~sK~~~e~~~~~~~~---------~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~D  233 (278)
                      +.+|...|..+..++.         ++++.++++||+++|||.+......+..++.....+.+...  +.+.++++|++|
T Consensus       157 ~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~D  236 (356)
T d1rkxa_         157 SNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLE  236 (356)
T ss_dssp             HHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETHH
T ss_pred             ccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCceEEeecccccccccccc
Confidence            9999999988887765         34788999999999999876555566777777777766555  447899999999


Q ss_pred             HHHHHHhhhcCCCCCc------eE-E-ecCccccHHHHHHHHHHhCC
Q 023689          234 VAKAQVLLFESPAASG------RY-L-CTNGIYQFGDFAERVSKLFP  272 (278)
Q Consensus       234 ~a~~~~~~~~~~~~~~------~~-~-~~~~~~s~~e~~~~i~~~~~  272 (278)
                      +|.++..++.+....+      .. . .....+++.++++.+.+.++
T Consensus       237 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  283 (356)
T d1rkxa_         237 PLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWG  283 (356)
T ss_dssp             HHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHC
T ss_pred             ccchhhhhhhhhcccccccccccccccccccccccchhhhhhHHHhC
Confidence            9999998887643321      11 1 12456899999999999874

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=100.00  E-value=4.5e-33  Score=232.85  Aligned_cols=257  Identities=16%  Similarity=0.161  Sum_probs=187.9

Q ss_pred             eEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCC--CcccccCCCCCCCceEEEEccCCChhhHHHHhcC--ccEEEE
Q 023689           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD--SSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG--CKGVFH   86 (278)
Q Consensus        11 ~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~--~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~--~d~vi~   86 (278)
                      ||||||||||||++|+++|+++|+ +|+++++-...  .+.+..+...  .+++++.+|++|.+.+.+++++  +|+|||
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~-~V~~id~~~~~~~~~~~~~~~~~--~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih   78 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGI-DLIVFDNLSRKGATDNLHWLSSL--GNFEFVHGDIRNKNDVTRLITKYMPDSCFH   78 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSTTHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcC-EEEEEECCCcccchhHHHHhhcc--CCcEEEEcccCCHHHHHHHHHhcCCceEEe
Confidence            799999999999999999999999 89988752211  1112111111  2899999999999999999985  599999


Q ss_pred             ecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCch----------hh
Q 023689           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDL----------EY  156 (278)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~----------~~  156 (278)
                      +|+.........++...+++|+.||.+|+++|++.+++++|+.||.+++++....  .+..+.....+          ..
T Consensus        79 ~aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  156 (338)
T d1orra_          79 LAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQ--YKYNETETRYTCVDKPNGYDEST  156 (338)
T ss_dssp             CCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTT--SCEEECSSCEEETTCTTCBCTTS
T ss_pred             ecccccccccccChHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccc--cccccccccccccccccCcccCC
Confidence            9987664333345678899999999999999999998888888887877765433  11111111000          00


Q ss_pred             hhccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCC--CchhHHHHHHHhh-----CCCCcc---ccccc
Q 023689          157 CKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY--LNASCAVLQQLLQ-----GSKDTQ---EYHWL  226 (278)
Q Consensus       157 ~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~--~~~~~~~~~~~~~-----~~~~~~---~~~~~  226 (278)
                      ...+.+.|+.+|...|.+...+.+.++.....+|++.+|++.....  ......++.....     +.+..+   +.+.+
T Consensus       157 ~~~~~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r  236 (338)
T d1orra_         157 QLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVR  236 (338)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEE
T ss_pred             ccccccccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCCceeE
Confidence            1123467999999999999999999999999999999998765443  2234444444332     344433   34789


Q ss_pred             CcccHHHHHHHHHhhhcCCC--CCceEEe---cCccccHHHHHHHHHHhCC
Q 023689          227 GAVPVKDVAKAQVLLFESPA--ASGRYLC---TNGIYQFGDFAERVSKLFP  272 (278)
Q Consensus       227 ~~i~~~D~a~~~~~~~~~~~--~~~~~~~---~~~~~s~~e~~~~i~~~~~  272 (278)
                      +++|++|++++++.++++..  .+.+|++   .+..+++.|+++.+.+..+
T Consensus       237 ~~~~v~D~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~  287 (338)
T d1orra_         237 DVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCN  287 (338)
T ss_dssp             ECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHT
T ss_pred             eeecccchhhHHHHHHhccccccCccccccccccccccHHHHHHHHHHHHC
Confidence            99999999999999997743  2335654   3457899999999999874

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=1.2e-31  Score=212.60  Aligned_cols=210  Identities=17%  Similarity=0.106  Sum_probs=161.9

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCC-CeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      ++|+|||||||||||++|+++|+++|. +.|++++|++........      ..+.+..+|+.+.+++.++++++|++||
T Consensus        13 ~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~------~~i~~~~~D~~~~~~~~~~~~~~d~vi~   86 (232)
T d2bkaa1          13 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAY------KNVNQEVVDFEKLDDYASAFQGHDVGFC   86 (232)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGG------GGCEEEECCGGGGGGGGGGGSSCSEEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhccccc------ceeeeeeecccccccccccccccccccc
Confidence            457999999999999999999999985 489999997754332221      1788889999999999999999999999


Q ss_pred             ecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhh
Q 023689           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPV  166 (278)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~  166 (278)
                      +++....   ......+.++|+.++.+++++|++.++++||++||..+. ..+                     .+.|+.
T Consensus        87 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~-~~~---------------------~~~Y~~  141 (232)
T d2bkaa1          87 CLGTTRG---KAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGAD-KSS---------------------NFLYLQ  141 (232)
T ss_dssp             CCCCCHH---HHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCC-TTC---------------------SSHHHH
T ss_pred             ccccccc---ccchhhhhhhcccccceeeecccccCccccccCCccccc-cCc---------------------cchhHH
Confidence            9986432   234577889999999999999999999999999985542 111                     156999


Q ss_pred             HHHHHHHHHHHHHHhcCCc-eEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHHHHHHHHHhhhcCC
Q 023689          167 SKTLAEKAAWEFAEKHGVD-VVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP  245 (278)
Q Consensus       167 sK~~~e~~~~~~~~~~~~~-~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  245 (278)
                      +|..+|+.+.    +.+++ ++|+||+.+||+.....  ....+........+.  +......||++|+|++++.++.++
T Consensus       142 ~K~~~E~~l~----~~~~~~~~IlRP~~i~G~~~~~~--~~~~~~~~~~~~~~~--~~~~~~~I~~~dvA~a~i~~~~~~  213 (232)
T d2bkaa1         142 VKGEVEAKVE----ELKFDRYSVFRPGVLLCDRQESR--PGEWLVRKFFGSLPD--SWASGHSVPVVTVVRAMLNNVVRP  213 (232)
T ss_dssp             HHHHHHHHHH----TTCCSEEEEEECCEEECTTGGGS--HHHHHHHHHHCSCCT--TGGGGTEEEHHHHHHHHHHHHTSC
T ss_pred             HHHHhhhccc----cccccceEEecCceeecCCCcCc--HHHHHHHHHhhccCC--cccCCCeEEHHHHHHHHHHHHhcC
Confidence            9999998885    55765 89999999999975543  233344444443322  223456799999999999999887


Q ss_pred             CCCceEEecCc
Q 023689          246 AASGRYLCTNG  256 (278)
Q Consensus       246 ~~~~~~~~~~~  256 (278)
                      ...+.++++++
T Consensus       214 ~~~~~~i~~~~  224 (232)
T d2bkaa1         214 RDKQMELLENK  224 (232)
T ss_dssp             CCSSEEEEEHH
T ss_pred             ccCCeEEEcHH
Confidence            77777776543

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=6.5e-31  Score=204.50  Aligned_cols=196  Identities=16%  Similarity=0.134  Sum_probs=151.8

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEe
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~   87 (278)
                      .||||+||||||+||++++++|+++|+ +|+++.|++++......      .+++++.+|++|.+++.++++++|+|||+
T Consensus         2 ~~kkIlV~GatG~iG~~v~~~Ll~~g~-~V~~~~R~~~~~~~~~~------~~~~~~~gD~~d~~~l~~al~~~d~vi~~   74 (205)
T d1hdoa_           2 AVKKIAIFGATGQTGLTTLAQAVQAGY-EVTVLVRDSSRLPSEGP------RPAHVVVGDVLQAADVDKTVAGQDAVIVL   74 (205)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCGGGSCSSSC------CCSEEEESCTTSHHHHHHHHTTCSEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEEcChhhcccccc------cccccccccccchhhHHHHhcCCCEEEEE
Confidence            478999999999999999999999999 99999998765433321      27899999999999999999999999999


Q ss_pred             cccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhhH
Q 023689           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVS  167 (278)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~s  167 (278)
                      +|....       ....+++..++.+++++++++++++||++||...++.....         +  +     ....|...
T Consensus        75 ~g~~~~-------~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~~~---------~--~-----~~~~~~~~  131 (205)
T d1hdoa_          75 LGTRND-------LSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKV---------P--P-----RLQAVTDD  131 (205)
T ss_dssp             CCCTTC-------CSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCS---------C--G-----GGHHHHHH
T ss_pred             eccCCc-------hhhhhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccCCCccc---------c--c-----cccccchH
Confidence            886432       23346778899999999999999999999986554322111         0  1     11357888


Q ss_pred             HHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHHHHHHHHHhhhcCCCC
Q 023689          168 KTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAA  247 (278)
Q Consensus       168 K~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  247 (278)
                      |..+|++++    +.+++++++||+.+++.........             ...+.....+|+++|+|++++.+++++..
T Consensus       132 ~~~~e~~l~----~~~~~~tiirp~~~~~~~~~~~~~~-------------~~~~~~~~~~i~~~DvA~~~~~~l~~~~~  194 (205)
T d1hdoa_         132 HIRMHKVLR----ESGLKYVAVMPPHIGDQPLTGAYTV-------------TLDGRGPSRVISKHDLGHFMLRCLTTDEY  194 (205)
T ss_dssp             HHHHHHHHH----HTCSEEEEECCSEEECCCCCSCCEE-------------ESSSCSSCSEEEHHHHHHHHHHTTSCSTT
T ss_pred             HHHHHHHHH----hcCCceEEEecceecCCCCcccEEE-------------eeCCCCCCCcCCHHHHHHHHHHHhCCCCC
Confidence            888888775    6799999999999987654322110             00123467789999999999999998876


Q ss_pred             Cce
Q 023689          248 SGR  250 (278)
Q Consensus       248 ~~~  250 (278)
                      .|+
T Consensus       195 ~g~  197 (205)
T d1hdoa_         195 DGH  197 (205)
T ss_dssp             TTC
T ss_pred             CCE
Confidence            563

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.97  E-value=1.3e-31  Score=218.42  Aligned_cols=222  Identities=17%  Similarity=0.118  Sum_probs=178.0

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc--CccEEEEe
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFHV   87 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vi~~   87 (278)
                      |||||||||||||++|+++|.++|+ +|++++|++                     +|++|.+++.++++  ++|+|||+
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~-~Vi~~~r~~---------------------~D~~d~~~~~~~l~~~~~d~vih~   59 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNV-EVIPTDVQD---------------------LDITNVLAVNKFFNEKKPNVVINC   59 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSE-EEEEECTTT---------------------CCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCC-EEEEeechh---------------------ccCCCHHHHHHHHHHcCCCEEEee
Confidence            5799999999999999999999999 898887743                     68999999999987  57999999


Q ss_pred             cccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhhH
Q 023689           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVS  167 (278)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~s  167 (278)
                      |+.................|+.....+.+.++..+ ..+++.||...+ +...  ..+.+|.++..+.      ..|+.+
T Consensus        60 a~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~~~ss~~v~-~~~~--~~~~~e~~~~~~~------~~~~~~  129 (281)
T d1vl0a_          60 AAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVG-AEIVQISTDYVF-DGEA--KEPITEFDEVNPQ------SAYGKT  129 (281)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHT-CEEEEEEEGGGS-CSCC--SSCBCTTSCCCCC------SHHHHH
T ss_pred             ccccccccccccchhhccccccccccccccccccc-ccccccccceee-eccc--cccccccccccch------hhhhhh
Confidence            98766544444567788899999999999888776 467777764444 3333  2667888776553      689999


Q ss_pred             HHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCc-ccccccCcccHHHHHHHHHhhhcCCC
Q 023689          168 KTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT-QEYHWLGAVPVKDVAKAQVLLFESPA  246 (278)
Q Consensus       168 K~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~D~a~~~~~~~~~~~  246 (278)
                      |...|+++.    +.+.+++++||+.+||+..+    +...++.....+.+.. .+++.++++|++|+++++..++++..
T Consensus       130 k~~~e~~~~----~~~~~~~i~R~~~vyG~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~~  201 (281)
T d1vl0a_         130 KLEGENFVK----ALNPKYYIVRTAWLYGDGNN----FVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEKN  201 (281)
T ss_dssp             HHHHHHHHH----HHCSSEEEEEECSEESSSSC----HHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHHTC
T ss_pred             hhHHHHHHH----HhCCCccccceeEEeCCCcc----cccchhhhhccCCceeecCCceeccchhhhhhhhhhhhhhhcc
Confidence            999998875    66899999999999999743    4456666666665544 46789999999999999999998865


Q ss_pred             CCceE-EecCccccHHHHHHHHHHhCC
Q 023689          247 ASGRY-LCTNGIYQFGDFAERVSKLFP  272 (278)
Q Consensus       247 ~~~~~-~~~~~~~s~~e~~~~i~~~~~  272 (278)
                      . |.| +.+++.+|+.|+++.+.+.++
T Consensus       202 ~-g~~~~~~~~~~s~~e~~~~i~~~~g  227 (281)
T d1vl0a_         202 Y-GTFHCTCKGICSWYDFAVEIFRLTG  227 (281)
T ss_dssp             C-EEEECCCBSCEEHHHHHHHHHHHHC
T ss_pred             c-CceeEeCCCccchHHHHHHHHHHhC
Confidence            4 565 567789999999999999874

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=8.6e-30  Score=209.80  Aligned_cols=241  Identities=19%  Similarity=0.188  Sum_probs=162.7

Q ss_pred             EEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhH-HHH-----hcCccEEE
Q 023689           12 VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAV-SRA-----VEGCKGVF   85 (278)
Q Consensus        12 vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~-~~~-----~~~~d~vi   85 (278)
                      |||||||||||++|+++|+++|+++|+++++-...... ..+.       +....|..+...+ ...     +..+++|+
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~-~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~   73 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-VNLV-------DLNIADYMDKEDFLIQIMAGEEFGDVEAIF   73 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGG-HHHH-------TSCCSEEEEHHHHHHHHHTTCCCSSCCEEE
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchh-hccc-------ccchhhhccchHHHHHHhhhhcccchhhhh
Confidence            89999999999999999999997578887642221111 1100       0011222332222 222     24679999


Q ss_pred             EecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhh
Q 023689           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYP  165 (278)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~  165 (278)
                      |+|+....  ...+.....+.|+.++.+++++++..+++ +++.||...+++...   ...+|+.+..      +.+.|+
T Consensus        74 ~~aa~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~i~-~v~~ss~~~~~~~~~---~~~~~~~~~~------~~~~Y~  141 (307)
T d1eq2a_          74 HEGACSST--TEWDGKYMMDNNYQYSKELLHYCLEREIP-FLYASSAATYGGRTS---DFIESREYEK------PLNVYG  141 (307)
T ss_dssp             ECCSCCCT--TCCCHHHHHHHTHHHHHHHHHHHHHHTCC-EEEEEEGGGGTTCCS---CBCSSGGGCC------CSSHHH
T ss_pred             hhcccccc--ccccccccccccccccccccccccccccc-ccccccccccccccc---cccccccccc------cccccc
Confidence            99986544  33456778888999999999999999875 666666565554332   3334433322      237899


Q ss_pred             hHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCC---CchhHHHHHHHhhCCCCcc----cccccCcccHHHHHHHH
Q 023689          166 VSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY---LNASCAVLQQLLQGSKDTQ----EYHWLGAVPVKDVAKAQ  238 (278)
Q Consensus       166 ~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~---~~~~~~~~~~~~~~~~~~~----~~~~~~~i~~~D~a~~~  238 (278)
                      .+|..+|.++..++++++++++++||+++|||.....   ......++.++..+.....    +...++++|++|+++++
T Consensus       142 ~~K~~~e~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~  221 (307)
T d1eq2a_         142 YSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVN  221 (307)
T ss_dssp             HHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHH
T ss_pred             cccchhhhhccccccccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHHHHH
Confidence            9999999999999999999999999999999976533   2344556666666655443    33689999999999999


Q ss_pred             HhhhcCCCCCceE-EecCccccHHHHHHHHHHhCCC
Q 023689          239 VLLFESPAASGRY-LCTNGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       239 ~~~~~~~~~~~~~-~~~~~~~s~~e~~~~i~~~~~~  273 (278)
                      ..++.+... +.| +.+++..+++|+++.+.+..++
T Consensus       222 ~~~~~~~~~-~~~~~~~~~~~si~~i~~~i~~~~~~  256 (307)
T d1eq2a_         222 LWFLENGVS-GIFNLGTGRAESFQAVADATLAYHKK  256 (307)
T ss_dssp             HHHHHHCCC-EEEEESCSCCBCHHHHHHHC------
T ss_pred             HHHhhhccc-cccccccccchhHHHHHHHHHHhcCC
Confidence            999887544 555 5678899999999999887653

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.96  E-value=2.8e-29  Score=200.12  Aligned_cols=230  Identities=22%  Similarity=0.178  Sum_probs=163.3

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCC-eEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYT-SINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~-~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      .|++|||||||||||++++++|+++|+. .|+++.|++++...+..       +++++.+|+++.+.+.++++++|.|||
T Consensus         2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~-------~~~~~~~d~~~~~~~~~~~~~~d~vi~   74 (252)
T d2q46a1           2 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGG-------EADVFIGDITDADSINPAFQGIDALVI   74 (252)
T ss_dssp             SCCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTC-------CTTEEECCTTSHHHHHHHHTTCSEEEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhccC-------CcEEEEeeeccccccccccccceeeEE
Confidence            4789999999999999999999999972 46667776654333221       788999999999999999999999999


Q ss_pred             ecccCCCCCC-------------CCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCc
Q 023689           87 VASPCTLEDP-------------VDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (278)
Q Consensus        87 ~a~~~~~~~~-------------~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~  153 (278)
                      +|+.......             .........+|+.++.+++..+.....+.+.+.|+.....+..              
T Consensus        75 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~--------------  140 (252)
T d2q46a1          75 LTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDH--------------  140 (252)
T ss_dssp             CCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTC--------------
T ss_pred             EEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccccccccccccccccCCCCc--------------
Confidence            9976443111             1234566788899999999999998888888888644322111              


Q ss_pred             hhhhhccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHHH
Q 023689          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKD  233 (278)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  233 (278)
                      + ........|...+.+.+.+    ....+++++++||+.+||+.......         ..+..........++||++|
T Consensus       141 ~-~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ilRp~~v~g~~~~~~~~---------~~~~~~~~~~~~~~~i~~~D  206 (252)
T d2q46a1         141 P-LNKLGNGNILVWKRKAEQY----LADSGTPYTIIRAGGLLDKEGGVREL---------LVGKDDELLQTDTKTVPRAD  206 (252)
T ss_dssp             G-GGGGGGCCHHHHHHHHHHH----HHHSSSCEEEEEECEEECSCTTSSCE---------EEESTTGGGGSSCCEEEHHH
T ss_pred             c-cccccccchhhhhhhhhhh----hhcccccceeecceEEECCCcchhhh---------hhccCcccccCCCCeEEHHH
Confidence            1 1111123455555554444    34789999999999999997544311         12222223345678999999


Q ss_pred             HHHHHHhhhcCCCCCc-eEEec-Cc---cccHHHHHHHHHHhCC
Q 023689          234 VAKAQVLLFESPAASG-RYLCT-NG---IYQFGDFAERVSKLFP  272 (278)
Q Consensus       234 ~a~~~~~~~~~~~~~~-~~~~~-~~---~~s~~e~~~~i~~~~~  272 (278)
                      +|++++.+++++...| +|+++ +.   ..+++++.+.+.+...
T Consensus       207 va~a~~~~l~~~~~~g~~~~i~~~~~~~~~~~~~~~~lf~~i~~  250 (252)
T d2q46a1         207 VAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVTS  250 (252)
T ss_dssp             HHHHHHHHTTCGGGTTEEEEEEECCTTTSCCCCCHHHHHTTCCC
T ss_pred             HHHHHHHHhCCccccCcEEEEeeCCCCCChhHHHHHHHHHHHHh
Confidence            9999999999887666 67544 22   4578888887776553

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.96  E-value=5.5e-28  Score=191.14  Aligned_cols=213  Identities=21%  Similarity=0.144  Sum_probs=156.7

Q ss_pred             cccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         5 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      ..+++|++|||||+++||++++++|.++|+ .|++..|+.+..+           ++..+++|++|+++++++++     
T Consensus         3 psl~gK~~lITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~-----------~~~~~~~Dv~~~~~v~~~~~~~~~~   70 (237)
T d1uzma1           3 PPFVSRSVLVTGGNRGIGLAIAQRLAADGH-KVAVTHRGSGAPK-----------GLFGVEVDVTDSDAVDRAFTAVEEH   70 (237)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCT-----------TSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCcchhc-----------CceEEEEecCCHHHHHHHHHHHHHh
Confidence            357899999999999999999999999999 8999988765432           66788999999999888875     


Q ss_pred             --CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccCC
Q 023689           80 --GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (278)
Q Consensus        80 --~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~  149 (278)
                        ++|++|||||....    +...++|+..+++|+.++..+.+++    ++++.+++|++||.++..+.++.        
T Consensus        71 ~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~--------  142 (237)
T d1uzma1          71 QGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQ--------  142 (237)
T ss_dssp             HSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CC--------
T ss_pred             cCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCccc--------
Confidence              57999999997554    3344678999999998887766644    55677799999998887665442        


Q ss_pred             CCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccccc
Q 023689          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (278)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (278)
                                  ..|+.+|...+.+.+.++.+   +||++++|.||.+.++.....   ............|      ..
T Consensus       143 ------------~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~---~~~~~~~~~~~~p------l~  201 (237)
T d1uzma1         143 ------------ANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRAL---DERIQQGALQFIP------AK  201 (237)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHS---CHHHHHHHGGGCT------TC
T ss_pred             ------------HHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhcc---CHHHHHHHHhcCC------CC
Confidence                        46888888888777777754   599999999999988753322   1222333333333      34


Q ss_pred             CcccHHHHHHHHHhhhcCCC--CCceEEecCccc
Q 023689          227 GAVPVKDVAKAQVLLFESPA--ASGRYLCTNGIY  258 (278)
Q Consensus       227 ~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~~~~  258 (278)
                      .+..++|+|+++++++....  -.|+.+..++.+
T Consensus       202 R~~~pedvA~~v~fL~S~~s~~itG~~i~vdGG~  235 (237)
T d1uzma1         202 RVGTPAEVAGVVSFLASEDASYISGAVIPVDGGM  235 (237)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             CCcCHHHHHHHHHHHhCchhcCCcCCeEEECCCC
Confidence            57899999999999986433  357655444443

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.96  E-value=2.2e-28  Score=195.25  Aligned_cols=226  Identities=16%  Similarity=0.127  Sum_probs=165.5

Q ss_pred             cccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc--
Q 023689            3 SEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE--   79 (278)
Q Consensus         3 ~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--   79 (278)
                      .+..+++|++|||||+++||+++++.|.++|+ .|++..|+.+..+.+. .+...+. ++.++.+|++|+++++++++  
T Consensus         4 ~~f~lenKvalITGas~GIG~a~a~~la~~Ga-~V~~~~r~~~~l~~~~~~l~~~g~-~~~~~~~Dvt~~~~v~~~~~~~   81 (251)
T d2c07a1           4 YYYCGENKVALVTGAGRGIGREIAKMLAKSVS-HVICISRTQKSCDSVVDEIKSFGY-ESSGYAGDVSKKEEISEVINKI   81 (251)
T ss_dssp             CCCCCSSCEEEEESTTSHHHHHHHHHHTTTSS-EEEEEESSHHHHHHHHHHHHTTTC-CEEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHH
Confidence            34567899999999999999999999999999 8888888765544332 2222222 78999999999999888875  


Q ss_pred             -----CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccc
Q 023689           80 -----GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVF  146 (278)
Q Consensus        80 -----~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~  146 (278)
                           ++|++||+|+.....    ...++|+..+++|+.++..+.+++    ++++.+++|++||..+..+.++.     
T Consensus        82 ~~~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~-----  156 (251)
T d2c07a1          82 LTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQ-----  156 (251)
T ss_dssp             HHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTC-----
T ss_pred             HHhcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCCC-----
Confidence                 579999999875542    233578999999998888777765    55567899999998887665543     


Q ss_pred             cCCCCCchhhhhccCchhhhHHHHHHHHHHHHHH---hcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccc
Q 023689          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (278)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (278)
                                     ..|+.+|...+.+.+.++.   ++||++++|.||.|.++.....   .......+....|     
T Consensus       157 ---------------~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~---~~~~~~~~~~~~p-----  213 (251)
T d2c07a1         157 ---------------ANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKI---SEQIKKNIISNIP-----  213 (251)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----C---CHHHHHHHHTTCT-----
T ss_pred             ---------------HHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEeccccccc---CHHHHHHHHhcCC-----
Confidence                           4688888888877777765   4589999999999998875443   2334444444444     


Q ss_pred             cccCcccHHHHHHHHHhhhcCCC--CCceEEecCcccc
Q 023689          224 HWLGAVPVKDVAKAQVLLFESPA--ASGRYLCTNGIYQ  259 (278)
Q Consensus       224 ~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~~~~s  259 (278)
                       ...+..++|+|+++++++....  -.|..+..++.+|
T Consensus       214 -l~R~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG~s  250 (251)
T d2c07a1         214 -AGRMGTPEEVANLACFLSSDKSGYINGRVFVIDGGLS  250 (251)
T ss_dssp             -TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSC
T ss_pred             -CCCCcCHHHHHHHHHHHhCchhCCCcCcEEEECCCcC
Confidence             3457899999999999986543  3576655444443

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.96  E-value=8.3e-29  Score=203.09  Aligned_cols=226  Identities=16%  Similarity=0.120  Sum_probs=168.4

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc--CccEEEEe
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFHV   87 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vi~~   87 (278)
                      |||||||||||||++|++.|.+.|+ .|.+..++..                  +.+|++|.+.+.++++  ++|+|||+
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g~-~v~~~~~~~~------------------~~~Dl~~~~~~~~~i~~~~~D~Vih~   61 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVGN-LIALDVHSKE------------------FCGDFSNPKGVAETVRKLRPDVIVNA   61 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTSE-EEEECTTCSS------------------SCCCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCC-EEEEECCCcc------------------ccCcCCCHHHHHHHHHHcCCCEEEEe
Confidence            5799999999999999999999987 6654433321                  1279999999999987  46999999


Q ss_pred             cccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhhH
Q 023689           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVS  167 (278)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~s  167 (278)
                      ||......+.+.+...+++|+.++.+++++|++.+. +++++||...++...   ..+.+|++++.|.      +.|+.+
T Consensus        62 Aa~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~ss~~~~~~~~---~~~~~E~~~~~p~------~~y~~~  131 (298)
T d1n2sa_          62 AAHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTG---DIPWQETDATSPL------NVYGKT  131 (298)
T ss_dssp             CCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCT---TCCBCTTSCCCCS------SHHHHH
T ss_pred             cccccccccccCccccccccccccccchhhhhcccc-ccccccccccccCCC---CCCCccccccCCC------chHhhh
Confidence            997665555677788999999999999999998884 688888766555432   3678888877664      789999


Q ss_pred             HHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcc-cccccCcccHHHHHHHHHhhhcC--
Q 023689          168 KTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ-EYHWLGAVPVKDVAKAQVLLFES--  244 (278)
Q Consensus       168 K~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~D~a~~~~~~~~~--  244 (278)
                      |..+|+.+.    .+.....++|++..++......   ...+......+.+... +....+++|++|+++++..++..  
T Consensus       132 k~~~e~~~~----~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~i~~~~  204 (298)
T d1n2sa_         132 KLAGEKALQ----DNCPKHLIFRTSWVYAGKGNNF---AKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVAL  204 (298)
T ss_dssp             HHHHHHHHH----HHCSSEEEEEECSEECSSSCCH---HHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHHHH
T ss_pred             hhhhhhhHH----hhhcccccccccceeeccCCcc---chhhhhhhcccceeecccceeecccccchHHHHHHHHHhhhh
Confidence            999998886    3445667777777775543332   2333344444444333 45788999999999998887753  


Q ss_pred             --CCCCceEEec-CccccHHHHHHHHHHhC
Q 023689          245 --PAASGRYLCT-NGIYQFGDFAERVSKLF  271 (278)
Q Consensus       245 --~~~~~~~~~~-~~~~s~~e~~~~i~~~~  271 (278)
                        ....+.|+++ ++.+++.++++.+.+..
T Consensus       205 ~~~~~~~~~n~~~~~~~~~~~~~~~i~~~~  234 (298)
T d1n2sa_         205 NKPEVAGLYHLVAGGTTTWHDYAALVFDEA  234 (298)
T ss_dssp             HCGGGCEEEECCCBSCEEHHHHHHHHHHHH
T ss_pred             ccccccccccccCCCceecHHHHHHHHhhh
Confidence              3345677654 57899999999887754

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.95  E-value=3.7e-28  Score=193.43  Aligned_cols=220  Identities=15%  Similarity=0.092  Sum_probs=158.5

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc-------
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------   79 (278)
                      +++|++|||||+++||+++++.|.++|+ .|++..|+++..+..+..      +..++++|++|+++++++++       
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~------~~~~~~~Dv~~~~~v~~~~~~~~~~~G   75 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFAREGA-LVALCDLRPEGKEVAEAI------GGAFFQVDLEDERERVRFVEEAAYALG   75 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTHHHHHHHH------TCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHc------CCeEEEEeCCCHHHHHHHHHHHHHhcC
Confidence            6799999999999999999999999999 888888887654433333      56788999999998888775       


Q ss_pred             CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccCCCC
Q 023689           80 GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (278)
Q Consensus        80 ~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~  151 (278)
                      ++|++|||||....    +...++|+..+++|+.++.++.+++    ++++-+++|++||..+..+.+..          
T Consensus        76 ~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~~----------  145 (248)
T d2d1ya1          76 RVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQEN----------  145 (248)
T ss_dssp             CCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTB----------
T ss_pred             CCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccccccccccccccccccccccc----------
Confidence            57999999997654    2234578899999999888877766    45566799999998887665542          


Q ss_pred             CchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCC---CchhHHHHHHHhhCCCCcccccc
Q 023689          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPY---LNASCAVLQQLLQGSKDTQEYHW  225 (278)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~  225 (278)
                                ..|+.+|...+.+.+.++.+   +|+++++|.||.+-++.....   ...............|      .
T Consensus       146 ----------~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p------l  209 (248)
T d2d1ya1         146 ----------AAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHA------L  209 (248)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTST------T
T ss_pred             ----------chhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCC------C
Confidence                      45777777777777666654   599999999999987642111   0001111122222222      3


Q ss_pred             cCcccHHHHHHHHHhhhcCCC--CCceEEecCcccc
Q 023689          226 LGAVPVKDVAKAQVLLFESPA--ASGRYLCTNGIYQ  259 (278)
Q Consensus       226 ~~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~~~~s  259 (278)
                      ..+..++|+|+++.+++....  -.|+.+..++.+|
T Consensus       210 ~R~~~pedia~~v~fL~S~~s~~itG~~i~vDGG~t  245 (248)
T d2d1ya1         210 RRLGKPEEVAEAVLFLASEKASFITGAILPVDGGMT  245 (248)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCcCHHHHHHHHHHHhCchhcCCCCcEEEcCcCcc
Confidence            457789999999999986433  3576555454443

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=2.7e-28  Score=193.71  Aligned_cols=219  Identities=17%  Similarity=0.144  Sum_probs=163.1

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc------
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~------   79 (278)
                      ++++|++|||||+++||+++++.|.++|+ .|++..|+++..+.+.+..  + .+...+.+|++|+++++++++      
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~-~Vv~~~r~~~~l~~~~~~~--~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~   76 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGA-KVIGTATSENGAQAISDYL--G-ANGKGLMLNVTDPASIESVLEKIRAEF   76 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHH--G-GGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHh--C-CCCcEEEEEecCHHHhhhhhhhhhccc
Confidence            46899999999999999999999999999 8888888776544433211  1 178899999999998888875      


Q ss_pred             -CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccCCC
Q 023689           80 -GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (278)
Q Consensus        80 -~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~  150 (278)
                       ++|++||+||....    +...++|+..+++|+.++..+.+++    ++++-+++|++||..+..+.++.         
T Consensus        77 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~---------  147 (243)
T d1q7ba_          77 GEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQ---------  147 (243)
T ss_dssp             CSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTC---------
T ss_pred             CCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCCC---------
Confidence             58999999987654    2334678899999999888877766    55566899999998887765543         


Q ss_pred             CCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccC
Q 023689          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (278)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (278)
                                 ..|+.+|.+.+.+.+.++.+   +|+++++|.||.+-++......   ...........|      ...
T Consensus       148 -----------~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~---~~~~~~~~~~~p------l~R  207 (243)
T d1q7ba_         148 -----------ANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALS---DDQRAGILAQVP------AGR  207 (243)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSC---HHHHHHHHTTCT------TSS
T ss_pred             -----------HHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhhhh---hhHHHHHHhcCC------CCC
Confidence                       46888888888777777754   5999999999999887543321   222233333333      345


Q ss_pred             cccHHHHHHHHHhhhcCCC--CCceEEecCcc
Q 023689          228 AVPVKDVAKAQVLLFESPA--ASGRYLCTNGI  257 (278)
Q Consensus       228 ~i~~~D~a~~~~~~~~~~~--~~~~~~~~~~~  257 (278)
                      +..++|+|+++++++....  -.|+.+..++.
T Consensus       208 ~~~pedvA~~v~fL~S~~s~~itGq~i~vdGG  239 (243)
T d1q7ba_         208 LGGAQEIANAVAFLASDEAAYITGETLHVNGG  239 (243)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCHHHHHHHHHHHhCchhcCCcCCeEEECCC
Confidence            7899999999999986433  35665544433

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.95  E-value=7.4e-28  Score=191.78  Aligned_cols=223  Identities=18%  Similarity=0.173  Sum_probs=152.4

Q ss_pred             cccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         5 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      +++++|++|||||+++||+++++.|.++|+ .|++..|++.+... ..+...+ .++..+++|++|+++++++++     
T Consensus         1 qrL~gKvalVTGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~-~~~~~~g-~~~~~~~~Dvs~~~~v~~~~~~~~~~   77 (247)
T d2ew8a1           1 QRLKDKLAVITGGANGIGRAIAERFAVEGA-DIAIADLVPAPEAE-AAIRNLG-RRVLTVKCDVSQPGDVEAFGKQVIST   77 (247)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHH-HHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCchHHHH-HHHHHcC-CcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            468899999999999999999999999999 88888886643211 1111112 278999999999999888865     


Q ss_pred             --CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccCC
Q 023689           80 --GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (278)
Q Consensus        80 --~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~  149 (278)
                        ++|++|||||....    +...++|+..+++|+.++..+.+++    ++++-+++|++||.++..+.+..        
T Consensus        78 ~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~--------  149 (247)
T d2ew8a1          78 FGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAY--------  149 (247)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSC--------
T ss_pred             cCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCccc--------
Confidence              68999999997654    2344688999999998888777765    55566899999998886665443        


Q ss_pred             CCCchhhhhccCchhhhHHHHHHHHHHHHHH---hcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccccc
Q 023689          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (278)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (278)
                                  ..|+.+|...+.+.+.++.   ++||++++|.||.|.++......  ........ ...    .....
T Consensus       150 ------------~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~--~~~~~~~~-~~~----~~~l~  210 (247)
T d2ew8a1         150 ------------THYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASA--LSAMFDVL-PNM----LQAIP  210 (247)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC---------------------CT----TSSSC
T ss_pred             ------------ccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccc--cchhHHHH-HHH----hccCC
Confidence                        4577777777766666665   55899999999999888643321  00111111 110    01233


Q ss_pred             CcccHHHHHHHHHhhhcCCC--CCceEEecCcc
Q 023689          227 GAVPVKDVAKAQVLLFESPA--ASGRYLCTNGI  257 (278)
Q Consensus       227 ~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~~~  257 (278)
                      .+..++|+|+++++++....  -.|..+..++.
T Consensus       211 r~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG  243 (247)
T d2ew8a1         211 RLQVPLDLTGAAAFLASDDASFITGQTLAVDGG  243 (247)
T ss_dssp             SCCCTHHHHHHHHHHTSGGGTTCCSCEEEESSS
T ss_pred             CCCCHHHHHHHHHHHhCchhcCCcCCeEEECCC
Confidence            56789999999999986433  35665544443

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.95  E-value=3.4e-27  Score=187.27  Aligned_cols=218  Identities=19%  Similarity=0.173  Sum_probs=160.6

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc------
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~------   79 (278)
                      ++++|++|||||+++||+++++.|.++|+ +|++..|+.+..+...+.     .+.+++.+|++|+++++++++      
T Consensus         2 ~L~gK~~lITGas~GIG~aia~~l~~~G~-~V~~~~r~~~~l~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~~   75 (242)
T d1ulsa_           2 RLKDKAVLITGAAHGIGRATLELFAKEGA-RLVACDIEEGPLREAAEA-----VGAHPVVMDVADPASVERGFAEALAHL   75 (242)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHT-----TTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHH-----cCCeEEEEecCCHHHHHHHHHHHHHhc
Confidence            57899999999999999999999999999 898898876554443321     167889999999999888875      


Q ss_pred             -CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHHHh----cCCCEEEEecceeeeecCCCCCCccccCCC
Q 023689           80 -GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (278)
Q Consensus        80 -~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~  150 (278)
                       ++|++|||||....    +...++|+..+++|+.++..+.+++.+    ++...++++|| .+..+.++.         
T Consensus        76 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss-~~~~~~~~~---------  145 (242)
T d1ulsa_          76 GRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTAS-RVYLGNLGQ---------  145 (242)
T ss_dssp             SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECC-GGGGCCTTC---------
T ss_pred             CCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeecc-ccccCCCCC---------
Confidence             57999999997654    233457899999999999888877633    45556777676 333333322         


Q ss_pred             CCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccC
Q 023689          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (278)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (278)
                                 ..|+.+|...+.+.+.++.+   +||++++|.||.|-++.....   ............|      ...
T Consensus       146 -----------~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~---~~~~~~~~~~~~p------l~R  205 (242)
T d1ulsa_         146 -----------ANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKV---PEKVREKAIAATP------LGR  205 (242)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSS---CHHHHHHHHHTCT------TCS
T ss_pred             -----------cchHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcC---CHHHHHHHHhcCC------CCC
Confidence                       46888888888777777654   589999999999999875543   2333444444444      345


Q ss_pred             cccHHHHHHHHHhhhcCCC--CCceEEecCcccc
Q 023689          228 AVPVKDVAKAQVLLFESPA--ASGRYLCTNGIYQ  259 (278)
Q Consensus       228 ~i~~~D~a~~~~~~~~~~~--~~~~~~~~~~~~s  259 (278)
                      +..++|+|+++++++....  -.|..+..++.++
T Consensus       206 ~~~pedia~~v~fL~S~~s~~itG~~i~vDGG~t  239 (242)
T d1ulsa_         206 AGKPLEVAYAALFLLSDESSFITGQVLFVDGGRT  239 (242)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             CCCHHHHHHHHHHHhchhhCCCCCcEEEECCCcc
Confidence            7789999999999986433  3576665555544

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.95  E-value=1.3e-27  Score=189.49  Aligned_cols=212  Identities=16%  Similarity=0.170  Sum_probs=158.0

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      ++++|++|||||+++||+++++.|+++|+ +|++..|+++..+.+. ++.    .++.++++|++|+++++++++     
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~~   77 (244)
T d1nffa_           3 RLTGKVALVSGGARGMGASHVRAMVAEGA-KVVFGDILDEEGKAMAAELA----DAARYVHLDVTQPAQWKAAVDTAVTA   77 (244)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTG----GGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhh----CcceEEEeecCCHHHHHHHHHHHHHH
Confidence            47899999999999999999999999999 8888888775544332 221    178899999999999888875     


Q ss_pred             --CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccCC
Q 023689           80 --GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (278)
Q Consensus        80 --~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~  149 (278)
                        ++|++||+||....    +...++|+..+++|+.++..+.+++    ++++-+++|++||..+..+.++.        
T Consensus        78 ~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~--------  149 (244)
T d1nffa_          78 FGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVAC--------  149 (244)
T ss_dssp             HSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTB--------
T ss_pred             hCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccccc--------
Confidence              57999999997654    2234578999999999988877755    44456789999998886655442        


Q ss_pred             CCCchhhhhccCchhhhHHHHHHHHHHHHHH---hcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccccc
Q 023689          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (278)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (278)
                                  ..|+.+|...+.+.+.++.   ++||++++|.||.|.++........        ...      ....
T Consensus       150 ------------~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~--------~~~------~pl~  203 (244)
T d1nffa_         150 ------------HGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPED--------IFQ------TALG  203 (244)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTT--------CSC------CSSS
T ss_pred             ------------cchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhHH--------HHh------cccc
Confidence                        4577777777777777665   4599999999999988764322100        011      1234


Q ss_pred             CcccHHHHHHHHHhhhcCCC--CCceEEecCc
Q 023689          227 GAVPVKDVAKAQVLLFESPA--ASGRYLCTNG  256 (278)
Q Consensus       227 ~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~~  256 (278)
                      .+..++|+|+++++++....  -.|+.+..++
T Consensus       204 R~~~p~diA~~v~fL~s~~s~~itG~~i~vDG  235 (244)
T d1nffa_         204 RAAEPVEVSNLVVYLASDESSYSTGAEFVVDG  235 (244)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCCHHHHHHHHHHHhChhhCCCcCCEEEECC
Confidence            57899999999999986433  3575544443

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.3e-27  Score=190.05  Aligned_cols=221  Identities=19%  Similarity=0.118  Sum_probs=163.8

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc---Ccc
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---GCK   82 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---~~d   82 (278)
                      .+++|++|||||+++||++++++|.++|+ +|++..|+.+..+.+....   . ++..+.+|++|+++++++++   ++|
T Consensus         4 ~L~GK~~lITGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~~---~-~~~~~~~Dv~d~~~v~~~~~~~g~iD   78 (244)
T d1pr9a_           4 FLAGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVSRTQADLDSLVREC---P-GIEPVCVDLGDWEATERALGSVGPVD   78 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHS---T-TCEEEECCTTCHHHHHHHHTTCCCCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHhc---C-CCeEEEEeCCCHHHHHHHHHHhCCce
Confidence            47899999999999999999999999999 8999998766544433211   1 67889999999999999887   579


Q ss_pred             EEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHHH-----hcCCCEEEEecceeeeecCCCCCCccccCCCCCc
Q 023689           83 GVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAK-----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (278)
Q Consensus        83 ~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~-----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~  153 (278)
                      ++||+|+....    +...++|+..+++|+.++..+.+++.     +.+.+++|++||..+..+.+..            
T Consensus        79 ilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~------------  146 (244)
T d1pr9a_          79 LLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNH------------  146 (244)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTB------------
T ss_pred             EEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccch------------
Confidence            99999987654    23446789999999998887777652     2345789999998876554432            


Q ss_pred             hhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCccc
Q 023689          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP  230 (278)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  230 (278)
                              ..|+.+|...+.+.+.++.+   +||++++|.||.|.++....... ............|      ...+..
T Consensus       147 --------~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~-~~~~~~~~~~~~p------l~R~~~  211 (244)
T d1pr9a_         147 --------SVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWS-DPHKAKTMLNRIP------LGKFAE  211 (244)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSC-SHHHHHHHHTTCT------TCSCBC
T ss_pred             --------hhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhcc-ChHHHHHHHhcCC------CCCCcC
Confidence                    46888888888777777754   58999999999999885433211 1223334444433      345789


Q ss_pred             HHHHHHHHHhhhcCCC--CCceEEecCccc
Q 023689          231 VKDVAKAQVLLFESPA--ASGRYLCTNGIY  258 (278)
Q Consensus       231 ~~D~a~~~~~~~~~~~--~~~~~~~~~~~~  258 (278)
                      ++|+|+++++++....  -.|+.+..++.+
T Consensus       212 peevA~~v~fL~S~~a~~itG~~i~vDGG~  241 (244)
T d1pr9a_         212 VEHVVNAILFLLSDRSGMTTGSTLPVEGGF  241 (244)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHHHhCchhCCcCCcEEEECccH
Confidence            9999999999886533  357665555544

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=5.6e-28  Score=193.27  Aligned_cols=221  Identities=18%  Similarity=0.202  Sum_probs=161.9

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      ++++|++|||||+++||++++++|.++|+ .|++..|+.+..+.+. ++...+. ++.++++|++|+++++++++     
T Consensus         8 ~L~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~l~~~g~-~~~~~~~Dvs~~~~~~~~~~~~~~~   85 (255)
T d1fmca_           8 RLDGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGG-QAFACRCDITSEQELSALADFAISK   85 (255)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCC-cEEEEEccCCCHHHHHHHHHHHHHH
Confidence            57899999999999999999999999999 8888888765543332 2222222 78999999999998888765     


Q ss_pred             --CccEEEEecccCCC---CCCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccCCC
Q 023689           80 --GCKGVFHVASPCTL---EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (278)
Q Consensus        80 --~~d~vi~~a~~~~~---~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~  150 (278)
                        ++|++||+||....   +...++|+..+++|+.++..+.+++    ++++-+++|++||.++..+.++.         
T Consensus        86 ~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~~~---------  156 (255)
T d1fmca_          86 LGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINM---------  156 (255)
T ss_dssp             HSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTC---------
T ss_pred             cCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhcccccc---------
Confidence              68999999997554   2334578899999999888877765    44566789999998876665543         


Q ss_pred             CCchhhhhccCchhhhHHHHHHHHHHHHHH---hcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccC
Q 023689          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (278)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (278)
                                 ..|+.+|...+.+.+.++.   ++||++++|.||.|.++......  ............|      ...
T Consensus       157 -----------~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~--~~e~~~~~~~~~p------l~R  217 (255)
T d1fmca_         157 -----------TSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVI--TPEIEQKMLQHTP------IRR  217 (255)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC--CHHHHHHHHHTCS------SCS
T ss_pred             -----------ccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccC--CHHHHHHHHhcCC------CCC
Confidence                       4677777777777776665   45899999999999887543321  1233444444444      345


Q ss_pred             cccHHHHHHHHHhhhcCCC--CCceEE-ecCc
Q 023689          228 AVPVKDVAKAQVLLFESPA--ASGRYL-CTNG  256 (278)
Q Consensus       228 ~i~~~D~a~~~~~~~~~~~--~~~~~~-~~~~  256 (278)
                      +..++|+|+++++++....  -.|+.+ +.++
T Consensus       218 ~g~pedvA~~v~fL~S~~s~~itG~~i~vDGG  249 (255)
T d1fmca_         218 LGQPQDIANAALFLCSPAASWVSGQILTVSGG  249 (255)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CcCHHHHHHHHHHHhCchhcCCcCCEEEECcC
Confidence            6789999999999986433  357554 4444

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.95  E-value=5.7e-28  Score=192.89  Aligned_cols=224  Identities=17%  Similarity=0.172  Sum_probs=162.2

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc------
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~------   79 (278)
                      ++++|++|||||+++||+++++.|.++|+ .|++..|+.+..+...+...... ++.++.+|++|+++++++++      
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGRHSDVGEKAAKSVGTPD-QIQFFQHDSSDEDGWTKLFDATEKAF   80 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTT-TEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCC-cEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            58899999999999999999999999999 88888887655444332212222 89999999999998888775      


Q ss_pred             -CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHH----HhcCC-CEEEEecceeeeecCCCCCCccccCC
Q 023689           80 -GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGV-RRVVVTSSISAIVPNPGWKGKVFDET  149 (278)
Q Consensus        80 -~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~-~~~v~~Ss~~~~~~~~~~~~~~~~E~  149 (278)
                       ++|++||+||....    +...++|+..+++|+.++..+.+++    ++++. +++|++||..+..+.++.        
T Consensus        81 G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~~--------  152 (251)
T d1zk4a1          81 GPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSL--------  152 (251)
T ss_dssp             SSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTC--------
T ss_pred             CCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCCc--------
Confidence             57999999987654    2234577889999999988887776    44443 479999998876655442        


Q ss_pred             CCCchhhhhccCchhhhHHHHHHHHHHHHHH-----hcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccc
Q 023689          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAE-----KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (278)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~-----~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (278)
                                  ..|+.+|...+.+.+.++.     ++||++++|.||.|.++.......  ...........|      
T Consensus       153 ------------~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~--~~~~~~~~~~~p------  212 (251)
T d1zk4a1         153 ------------GAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPG--AEEAMSQRTKTP------  212 (251)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTT--HHHHHTSTTTCT------
T ss_pred             ------------hhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCC--HHHHHHHHhCCC------
Confidence                        4688888888877776664     458999999999998875333211  111111111111      


Q ss_pred             ccCcccHHHHHHHHHhhhcCCC--CCceEEecCcccc
Q 023689          225 WLGAVPVKDVAKAQVLLFESPA--ASGRYLCTNGIYQ  259 (278)
Q Consensus       225 ~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~~~~s  259 (278)
                      ...+..++|+|+++++++....  -.|..+..++.+|
T Consensus       213 l~R~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG~t  249 (251)
T d1zk4a1         213 MGHIGEPNDIAYICVYLASNESKFATGSEFVVDGGYT  249 (251)
T ss_dssp             TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCCcCHHHHHHHHHHHhCchhCCCcCcEEEECcccc
Confidence            3457899999999999986433  3576665555555

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.95  E-value=4.3e-28  Score=189.49  Aligned_cols=197  Identities=18%  Similarity=0.174  Sum_probs=135.9

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCC-CeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHh-cCccEEEE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAV-EGCKGVFH   86 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~-~~~d~vi~   86 (278)
                      .|||||||||||||++|+++|+++|+ ..|++..|++.....          .+.   .+..|..++.+.+ ..+|+|||
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~~~----------~~~---~~~~d~~~~~~~~~~~~d~vi~   68 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHP----------RLD---NPVGPLAELLPQLDGSIDTAFC   68 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCCT----------TEE---CCBSCHHHHGGGCCSCCSEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhhcc----------ccc---ccccchhhhhhccccchheeee
Confidence            48999999999999999999999997 256666665432111          332   3444444444333 45899999


Q ss_pred             ecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhh
Q 023689           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPV  166 (278)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~  166 (278)
                      ++|.....  ......+.+.|+.++.+++++|++.++++|+++||..+... .                     .+.|+.
T Consensus        69 ~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~~~-~---------------------~~~y~~  124 (212)
T d2a35a1          69 CLGTTIKE--AGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAK-S---------------------SIFYNR  124 (212)
T ss_dssp             CCCCCHHH--HSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT-C---------------------SSHHHH
T ss_pred             eeeeeccc--cccccccccchhhhhhhcccccccccccccccccccccccc-c---------------------ccchhH
Confidence            98764321  23446889999999999999999999999999998554211 1                     156999


Q ss_pred             HHHHHHHHHHHHHHhcCC-ceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHHHHHHHHHhhhcCC
Q 023689          167 SKTLAEKAAWEFAEKHGV-DVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP  245 (278)
Q Consensus       167 sK~~~e~~~~~~~~~~~~-~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  245 (278)
                      +|..+|+.+.    +.+. +++++||+.|||+........   .    ............+++||++|+|++++.++.++
T Consensus       125 ~K~~~E~~l~----~~~~~~~~I~Rp~~v~G~~~~~~~~~---~----~~~~~~~~~~~~~~~i~v~DvA~ai~~~~~~~  193 (212)
T d2a35a1         125 VKGELEQALQ----EQGWPQLTIARPSLLFGPREEFRLAE---I----LAAPIARILPGKYHGIEACDLARALWRLALEE  193 (212)
T ss_dssp             HHHHHHHHHT----TSCCSEEEEEECCSEESTTSCEEGGG---G----TTCCCC----CHHHHHHHHHHHHHHHHHHTCC
T ss_pred             HHHHHhhhcc----ccccccceeeCCcceeCCcccccHHH---H----HHHHHhhccCCCCcEEEHHHHHHHHHHHHcCC
Confidence            9999998875    5566 599999999999976432110   0    01111111113456799999999999999876


Q ss_pred             CCCceEEe
Q 023689          246 AASGRYLC  253 (278)
Q Consensus       246 ~~~~~~~~  253 (278)
                      ..+..|+.
T Consensus       194 ~~g~~~~~  201 (212)
T d2a35a1         194 GKGVRFVE  201 (212)
T ss_dssp             CSEEEEEE
T ss_pred             CCCCEEEE
Confidence            65334443

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.95  E-value=1.7e-27  Score=190.99  Aligned_cols=227  Identities=17%  Similarity=0.133  Sum_probs=161.4

Q ss_pred             cccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCC-Ccccc-cCCCCCCCceEEEEccCCChhhHHHHhc---
Q 023689            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE---   79 (278)
Q Consensus         5 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~-~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---   79 (278)
                      +++++|++|||||+++||++++++|.++|+ +|++..|+.+. .+.+. .+...+. ++..+++|++|+++++++++   
T Consensus         3 ~dL~gK~alITGas~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~g~-~~~~~~~Dvt~~~~v~~~~~~~~   80 (261)
T d1geea_           3 KDLEGKVVVITGSSTGLGKSMAIRFATEKA-KVVVNYRSKEDEANSVLEEIKKVGG-EAIAVKGDVTVESDVINLVQSAI   80 (261)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTC-EEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHH
Confidence            468999999999999999999999999999 88888887542 22221 1111122 78899999999999888875   


Q ss_pred             ----CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHH----HhcC-CCEEEEecceeeeecCCCCCCccc
Q 023689           80 ----GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFG-VRRVVVTSSISAIVPNPGWKGKVF  146 (278)
Q Consensus        80 ----~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~-~~~~v~~Ss~~~~~~~~~~~~~~~  146 (278)
                          ++|++||+||....    +...++|+..+++|+.++..+.+++    ++++ .+.+|++||.++..+.++.     
T Consensus        81 ~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~~-----  155 (261)
T d1geea_          81 KEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLF-----  155 (261)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTC-----
T ss_pred             HHhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCccc-----
Confidence                57999999997654    2344678999999998888777665    4444 3458899998876555442     


Q ss_pred             cCCCCCchhhhhccCchhhhHHHHHHHHHHHHHH---hcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccc
Q 023689          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (278)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (278)
                                     ..|+.+|...+.+.+.++.   ++||++++|.||.|.++...... .............|     
T Consensus       156 ---------------~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~-~~~~~~~~~~~~~p-----  214 (261)
T d1geea_         156 ---------------VHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKF-ADPEQRADVESMIP-----  214 (261)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHH-HSHHHHHHHHTTCT-----
T ss_pred             ---------------cccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhc-CCHHHHHHHHhcCC-----
Confidence                           4577787777777776665   45999999999999887532210 11222233333333     


Q ss_pred             cccCcccHHHHHHHHHhhhcCCC--CCceEEecCccccH
Q 023689          224 HWLGAVPVKDVAKAQVLLFESPA--ASGRYLCTNGIYQF  260 (278)
Q Consensus       224 ~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~~~~s~  260 (278)
                       ...+..++|+|+++++++....  -.|+.+..++.+++
T Consensus       215 -l~R~~~pediA~~v~fL~S~~s~~itG~~i~vDGG~sl  252 (261)
T d1geea_         215 -MGYIGEPEEIAAVAAWLASSEASYVTGITLFADGGMTL  252 (261)
T ss_dssp             -TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             -CCCCCCHHHHHHHHHHHhCchhcCCcCCeEEECCCeeC
Confidence             3457799999999999986433  35766555555543

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=8.7e-28  Score=191.37  Aligned_cols=221  Identities=19%  Similarity=0.141  Sum_probs=161.5

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc------
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~------   79 (278)
                      ++++|++|||||+++||+++++.|.++|+ .|++..|+.+..+.+....   . ++.++.+|++|+++++++++      
T Consensus         3 rl~GK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~~---~-~~~~~~~Dvs~~~~v~~~~~~~~~~~   77 (250)
T d1ydea1           3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGA-RVVICDKDESGGRALEQEL---P-GAVFILCDVTQEDDVKTLVSETIRRF   77 (250)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHC---T-TEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhc---C-CCeEEEccCCCHHHHHHHHHHHHHhc
Confidence            57899999999999999999999999999 8888888765544443221   1 78899999999999888875      


Q ss_pred             -CccEEEEecccCCC-----CCCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccCC
Q 023689           80 -GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (278)
Q Consensus        80 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~  149 (278)
                       ++|++||+||....     +...++|+..+++|+.++..+.+++    ++.+ +++|++||..+..+.+..        
T Consensus        78 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G~Ii~isS~~~~~~~~~~--------  148 (250)
T d1ydea1          78 GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ-GNVINISSLVGAIGQAQA--------  148 (250)
T ss_dssp             SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCHHHHHCCTTC--------
T ss_pred             CCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCC-CCCcccccccccccccCc--------
Confidence             57999999986432     2233568899999999988887766    3334 689999998887665543        


Q ss_pred             CCCchhhhhccCchhhhHHHHHHHHHHHHHH---hcCCceEEEecceeeCCCCCCC---CchhHHHHHHHhhCCCCcccc
Q 023689          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPY---LNASCAVLQQLLQGSKDTQEY  223 (278)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lrp~~i~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~  223 (278)
                                  ..|+.+|...+.+.+.++.   ++||++++|.||.|.++.....   .......+.+.....|     
T Consensus       149 ------------~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~p-----  211 (250)
T d1ydea1         149 ------------VPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQP-----  211 (250)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTST-----
T ss_pred             ------------chhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCC-----
Confidence                        4688888887777777775   4599999999999987642211   1122333444444444     


Q ss_pred             cccCcccHHHHHHHHHhhhcCC-CCCceEEecCccc
Q 023689          224 HWLGAVPVKDVAKAQVLLFESP-AASGRYLCTNGIY  258 (278)
Q Consensus       224 ~~~~~i~~~D~a~~~~~~~~~~-~~~~~~~~~~~~~  258 (278)
                       ...+..++|+|+++++++... .-.|+.+..++.+
T Consensus       212 -l~R~g~p~eva~~v~fL~Sda~~itG~~i~vDGG~  246 (250)
T d1ydea1         212 -LGRMGQPAEVGAAAVFLASEANFCTGIELLVTGGA  246 (250)
T ss_dssp             -TSSCBCHHHHHHHHHHHHHHCTTCCSCEEEESTTT
T ss_pred             -CCCCCCHHHHHHHHHHHhCccCCCcCCeEEECCCc
Confidence             346789999999999988532 2356555444433

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.95  E-value=2.3e-27  Score=190.00  Aligned_cols=226  Identities=15%  Similarity=0.153  Sum_probs=163.6

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      ++++|++|||||+++||++++++|+++|+ +|++..|+++..+...+ +.... ..++++.+|++++++++++++     
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~-~V~i~~r~~~~l~~~~~~~~~~~-~~~~~~~~D~s~~~~~~~~~~~~~~~   80 (258)
T d1ae1a_           3 SLKGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKG-LNVEGSVCDLLSRTERDKLMQTVAHV   80 (258)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcC-CCceEEEeecCCHHHHHHHHHHHHHH
Confidence            46799999999999999999999999999 89999997755433322 22122 278899999999998877764     


Q ss_pred             ---CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccC
Q 023689           80 ---GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (278)
Q Consensus        80 ---~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E  148 (278)
                         .+|+++|+|+....    +...++|+..+++|+.++..+.+++    ++.+.+++|++||..+..+.+..       
T Consensus        81 ~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~~-------  153 (258)
T d1ae1a_          81 FDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSV-------  153 (258)
T ss_dssp             TTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTC-------
T ss_pred             hCCCcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccccccc-------
Confidence               37999999987654    2234578999999999998887766    44467899999998886655442       


Q ss_pred             CCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCC---chhHHHHHHHhhCCCCccc
Q 023689          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYL---NASCAVLQQLLQGSKDTQE  222 (278)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~---~~~~~~~~~~~~~~~~~~~  222 (278)
                                   ..|+.+|...+.+.+.++++   +||++++|.||.+.++......   ......+..+....|    
T Consensus       154 -------------~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~p----  216 (258)
T d1ae1a_         154 -------------SLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTP----  216 (258)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHST----
T ss_pred             -------------hhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCC----
Confidence                         46888888888888777765   4899999999999988643331   122344444444444    


Q ss_pred             ccccCcccHHHHHHHHHhhhcCCC--CCceEEecCcccc
Q 023689          223 YHWLGAVPVKDVAKAQVLLFESPA--ASGRYLCTNGIYQ  259 (278)
Q Consensus       223 ~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~~~~s  259 (278)
                        ...+..++|+|.++++++....  -.|..+..++.+|
T Consensus       217 --lgR~~~pediA~~v~fL~S~~s~~itG~~i~vDGG~s  253 (258)
T d1ae1a_         217 --MGRAGKPQEVSALIAFLCFPAASYITGQIIWADGGFT  253 (258)
T ss_dssp             --TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             --CCCCcCHHHHHHHHHHHhChhhCCCcCcEEEeCCCee
Confidence              3457899999999999985433  4677666666554

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.95  E-value=8.9e-28  Score=192.62  Aligned_cols=227  Identities=16%  Similarity=0.115  Sum_probs=165.3

Q ss_pred             cccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc----
Q 023689            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (278)
Q Consensus         5 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~----   79 (278)
                      .++++|++|||||+++||+++++.|.++|+ .|++..|+.+..+... ++.... .++.++++|++|+++++++++    
T Consensus         4 f~L~GK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~g-~~~~~~~~Dv~~~~~v~~~~~~~~~   81 (259)
T d2ae2a_           4 WNLEGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKG-FKVEASVCDLSSRSERQELMNTVAN   81 (259)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT-CEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcC-CCceEEEeeCCCHHHHHHHHHHHHH
Confidence            367899999999999999999999999999 8888888765543332 222222 278899999999988887753    


Q ss_pred             ----CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCcccc
Q 023689           80 ----GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFD  147 (278)
Q Consensus        80 ----~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~  147 (278)
                          .+|++||+||....    +...++|+..+++|+.++..+.+++    ++++-+++|++||..+..+.++.      
T Consensus        82 ~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~------  155 (259)
T d2ae2a_          82 HFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYE------  155 (259)
T ss_dssp             HTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTC------
T ss_pred             HhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccccccc------
Confidence                37999999997554    2334578899999999888777765    44566799999998876554442      


Q ss_pred             CCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCC--chhHHHHHHHhhCCCCccc
Q 023689          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYL--NASCAVLQQLLQGSKDTQE  222 (278)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~  222 (278)
                                    ..|+.+|...+.+.+.++.+   +||++++|.||.|.++......  ......+.++....|    
T Consensus       156 --------------~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~p----  217 (259)
T d2ae2a_         156 --------------AVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCA----  217 (259)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTST----
T ss_pred             --------------cchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCC----
Confidence                          46888888888777777754   5899999999999887532211  112334445555444    


Q ss_pred             ccccCcccHHHHHHHHHhhhcCCC--CCceEEecCcccc
Q 023689          223 YHWLGAVPVKDVAKAQVLLFESPA--ASGRYLCTNGIYQ  259 (278)
Q Consensus       223 ~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~~~~s  259 (278)
                        ...+..++|+|+++++++....  -.|+.+..++.++
T Consensus       218 --l~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG~~  254 (259)
T d2ae2a_         218 --LRRMGEPKELAAMVAFLCFPAASYVTGQIIYVDGGLM  254 (259)
T ss_dssp             --TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             --CCCCcCHHHHHHHHHHHhCchhCCCcCcEEEECCCeE
Confidence              3457789999999999986433  3576655554443

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.95  E-value=1.3e-27  Score=189.68  Aligned_cols=221  Identities=19%  Similarity=0.139  Sum_probs=162.3

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc---Ccc
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---GCK   82 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---~~d   82 (278)
                      ++++|++|||||+++||++++++|.++|+ +|++..|+.+..+.+..-.   . ++..+.+|++|+++++++++   ++|
T Consensus         2 dl~GK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~---~-~~~~~~~Dv~~~~~v~~~~~~~g~iD   76 (242)
T d1cyda_           2 NFSGLRALVTGAGKGIGRDTVKALHASGA-KVVAVTRTNSDLVSLAKEC---P-GIEPVCVDLGDWDATEKALGGIGPVD   76 (242)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHS---T-TCEEEECCTTCHHHHHHHHTTCCCCS
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhc---C-CCeEEEEeCCCHHHHHHHHHHcCCCe
Confidence            58899999999999999999999999999 8988888765543332211   1 68889999999999999987   479


Q ss_pred             EEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHHHh-----cCCCEEEEecceeeeecCCCCCCccccCCCCCc
Q 023689           83 GVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKR-----FGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (278)
Q Consensus        83 ~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~-----~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~  153 (278)
                      ++|||||....    +...++|+..+++|+.++..+.+++.+     ...+++|++||..+..+.++.            
T Consensus        77 ilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~------------  144 (242)
T d1cyda_          77 LLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNL------------  144 (242)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTB------------
T ss_pred             EEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCcc------------
Confidence            99999997554    234457889999999999888876532     235689999997776554432            


Q ss_pred             hhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCccc
Q 023689          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP  230 (278)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  230 (278)
                              ..|+.+|...+.+.+.++.+   +||++++|.||.+.++...... .............|      ...+..
T Consensus       145 --------~~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~-~~~~~~~~~~~~~p------l~R~~~  209 (242)
T d1cyda_         145 --------ITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVS-ADPEFARKLKERHP------LRKFAE  209 (242)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHT-CCHHHHHHHHHHST------TSSCBC
T ss_pred             --------ccccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhc-CCHHHHHHHHhcCC------CCCCcC
Confidence                    46888888888888877764   5899999999999887432211 11233333333333      355789


Q ss_pred             HHHHHHHHHhhhcCCC--CCceEEecCccc
Q 023689          231 VKDVAKAQVLLFESPA--ASGRYLCTNGIY  258 (278)
Q Consensus       231 ~~D~a~~~~~~~~~~~--~~~~~~~~~~~~  258 (278)
                      ++|+|+++++++....  -.|+.+..++.+
T Consensus       210 peeva~~v~fL~S~~s~~itG~~i~vDGG~  239 (242)
T d1cyda_         210 VEDVVNSILFLLSDRSASTSGGGILVDAGY  239 (242)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSSEEEESTTG
T ss_pred             HHHHHHHHHHHhCchhcCcCCceEEeCcch
Confidence            9999999999986433  356555444433

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.95  E-value=7.6e-27  Score=188.34  Aligned_cols=229  Identities=18%  Similarity=0.205  Sum_probs=162.9

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc------
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~------   79 (278)
                      ++++|++|||||+++||+++++.|.++|+ +|++..|+.+..+.+........ .+.++.+|++|+++++++++      
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADIADDHGQKVCNNIGSPD-VISFVHCDVTKDEDVRNLVDTTIAKH   80 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTT-TEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCC-ceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999999 88888887655443322111122 68899999999999888875      


Q ss_pred             -CccEEEEecccCCCC------CCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccC
Q 023689           80 -GCKGVFHVASPCTLE------DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (278)
Q Consensus        80 -~~d~vi~~a~~~~~~------~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E  148 (278)
                       ++|++||+||.....      ...++|+..+++|+.++..+.+++    ++++-+++|++||..+..+....       
T Consensus        81 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~-------  153 (268)
T d2bgka1          81 GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGV-------  153 (268)
T ss_dssp             SCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTS-------
T ss_pred             CCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCcccccccccccccccc-------
Confidence             579999999865431      123468889999999888777766    44566789999998776543321       


Q ss_pred             CCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccc
Q 023689          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (278)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (278)
                                  ...|+.+|...+.+.+.++.+   +||++++|.||.|.++......................    ..
T Consensus       154 ------------~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~----~~  217 (268)
T d2bgka1         154 ------------SHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAAN----LK  217 (268)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCS----SC
T ss_pred             ------------ccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccc----cC
Confidence                        135788888888777777654   59999999999999987654432222222222211111    12


Q ss_pred             cCcccHHHHHHHHHhhhcCCC--CCceEEecCcccc
Q 023689          226 LGAVPVKDVAKAQVLLFESPA--ASGRYLCTNGIYQ  259 (278)
Q Consensus       226 ~~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~~~~s  259 (278)
                      ..+..++|+|+++++++....  -.|+.+..++.+|
T Consensus       218 gr~~~pedvA~~v~fL~S~~s~~itGq~i~VDGG~t  253 (268)
T d2bgka1         218 GTLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYT  253 (268)
T ss_dssp             SCCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCcCHHHHHHHHHHHhChhhCCccCceEEECcCcc
Confidence            346789999999999986433  3576665555554

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.95  E-value=9.4e-28  Score=192.40  Aligned_cols=224  Identities=16%  Similarity=0.150  Sum_probs=145.4

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      ++++|++|||||+++||+++++.|+++|+ +|++..|+.+..+... .+.... .++..+.+|++|+++++++++     
T Consensus         5 ~LkgK~alVTGas~GIG~aiA~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (259)
T d1xq1a_           5 SLKAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCARNEYELNECLSKWQKKG-FQVTGSVCDASLRPEREKLMQTVSSM   82 (259)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcC-CceEEEeccCCCHHHHHHHHHHHHHH
Confidence            46799999999999999999999999999 8888888765543332 221112 278999999999988877653     


Q ss_pred             ---CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccC
Q 023689           80 ---GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (278)
Q Consensus        80 ---~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E  148 (278)
                         .+|++||+||....    +...++|+..+++|+.++..+.+++    ++++.+++|++||..+..+.+..       
T Consensus        83 ~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~-------  155 (259)
T d1xq1a_          83 FGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVG-------  155 (259)
T ss_dssp             HTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------C-------
T ss_pred             hCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccccccccccccccccccccccc-------
Confidence               37999999997654    2344678999999999988877765    44566899999998886654432       


Q ss_pred             CCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccc
Q 023689          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (278)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (278)
                                   ..|+.+|...+.+.+.++.+   +||++++|.||.|.++......  ............|      .
T Consensus       156 -------------~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~--~~~~~~~~~~~~p------l  214 (259)
T d1xq1a_         156 -------------SIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVY--DDEFKKVVISRKP------L  214 (259)
T ss_dssp             -------------CHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC------------------------------
T ss_pred             -------------ccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhc--hHHHHHHHHhCCC------C
Confidence                         46888888888777777654   5999999999999888643321  1111111111122      3


Q ss_pred             cCcccHHHHHHHHHhhhcCCC--CCceEEecCcccc
Q 023689          226 LGAVPVKDVAKAQVLLFESPA--ASGRYLCTNGIYQ  259 (278)
Q Consensus       226 ~~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~~~~s  259 (278)
                      ..+..++|+|+++++++....  -.|..+..++.++
T Consensus       215 ~R~~~pedvA~~v~fL~S~~s~~iTG~~i~vDGG~s  250 (259)
T d1xq1a_         215 GRFGEPEEVSSLVAFLCMPAASYITGQTICVDGGLT  250 (259)
T ss_dssp             ---CCGGGGHHHHHHHTSGGGTTCCSCEEECCCCEE
T ss_pred             CCCcCHHHHHHHHHHHhCchhcCCcCcEEEeCCCEE
Confidence            446789999999999885432  3576665555554

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.95  E-value=2.5e-27  Score=190.18  Aligned_cols=220  Identities=21%  Similarity=0.184  Sum_probs=161.2

Q ss_pred             cccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCCCCCCceEEEEccCCChhhHHHHhc----
Q 023689            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE----   79 (278)
Q Consensus         5 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~----   79 (278)
                      +++++|++|||||+++||+++++.|.++|+ .|++..|+.+..+.... +...+ .++..+.+|++|+++++++++    
T Consensus         1 krL~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~g-~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (260)
T d1zema1           1 KKFNGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMNREALEKAEASVREKG-VEARSYVCDVTSEEAVIGTVDSVVR   78 (260)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTT-SCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHH
Confidence            367899999999999999999999999999 88888887655443322 22222 278999999999998888875    


Q ss_pred             ---CccEEEEecccCCC-----CCCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCcccc
Q 023689           80 ---GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFD  147 (278)
Q Consensus        80 ---~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~  147 (278)
                         ++|++||+||....     +...++|+..+++|+.++..+.+++    ++++-+++|++||.++..+.++.      
T Consensus        79 ~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~------  152 (260)
T d1zema1          79 DFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNM------  152 (260)
T ss_dssp             HHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTB------
T ss_pred             HhCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcch------
Confidence               57999999986533     2344678899999999888877766    44566799999998887765543      


Q ss_pred             CCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCC-------------CCCchhHHHHH
Q 023689          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQ-------------PYLNASCAVLQ  211 (278)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~-------------~~~~~~~~~~~  211 (278)
                                    ..|+.+|...+.+.+.++.+   +||++++|.||.|-++...             ...........
T Consensus       153 --------------~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (260)
T d1zema1         153 --------------AAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQ  218 (260)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHH
T ss_pred             --------------HHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHH
Confidence                          46778887777777777654   5899999999999887421             11112233334


Q ss_pred             HHhhCCCCcccccccCcccHHHHHHHHHhhhcCCC--CCceEE
Q 023689          212 QLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYL  252 (278)
Q Consensus       212 ~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~  252 (278)
                      .+....|      ...+..++|+|+++++++....  -.|+.+
T Consensus       219 ~~~~~~P------l~R~g~pedvA~~v~fL~S~~s~~itG~~i  255 (260)
T d1zema1         219 QMIGSVP------MRRYGDINEIPGVVAFLLGDDSSFMTGVNL  255 (260)
T ss_dssp             HHHHTST------TSSCBCGGGSHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHhcCC------CCCCcCHHHHHHHHHHHhCchhcCccCCeE
Confidence            4444444      3457789999999999986533  346543

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.95  E-value=7.2e-28  Score=198.60  Aligned_cols=230  Identities=14%  Similarity=0.087  Sum_probs=159.3

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccc--ccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL--FALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~--~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      .+||||||||||||++|+++|+++|+ .|++++|+.......  ..+......+++++++|++|.+.+.+++++++.+++
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~~~~~   81 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGH-PTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVIS   81 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCcchhhh
Confidence            35799999999999999999999998 899999976543221  111000112789999999999999999999999999


Q ss_pred             ecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhh
Q 023689           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPV  166 (278)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~  166 (278)
                      +++...           ...|..++.+++++|++.+..++++.||.+.. +..        +..+.      .+...|..
T Consensus        82 ~~~~~~-----------~~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~-~~~--------~~~~~------~~~~~~~~  135 (312)
T d1qyda_          82 ALAGGV-----------LSHHILEQLKLVEAIKEAGNIKRFLPSEFGMD-PDI--------MEHAL------QPGSITFI  135 (312)
T ss_dssp             CCCCSS-----------SSTTTTTHHHHHHHHHHSCCCSEEECSCCSSC-TTS--------CCCCC------SSTTHHHH
T ss_pred             hhhhcc-----------cccchhhhhHHHHHHHHhcCCcEEEEeecccc-CCC--------ccccc------chhhhhhH
Confidence            986533           23456667889999998887788888874332 111        11111      11134555


Q ss_pred             HHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCC-cc--cccccCcccHHHHHHHHHhhhc
Q 023689          167 SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKD-TQ--EYHWLGAVPVKDVAKAQVLLFE  243 (278)
Q Consensus       167 sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~i~~~D~a~~~~~~~~  243 (278)
                      .|...++    +....+++++++||+.+||+............   ...+... ..  +++.++++|++|+|++++.++.
T Consensus       136 ~~~~~~~----~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~  208 (312)
T d1qyda_         136 DKRKVRR----AIEAASIPYTYVSSNMFAGYFAGSLAQLDGHM---MPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSID  208 (312)
T ss_dssp             HHHHHHH----HHHHTTCCBCEEECCEEHHHHTTTSSCTTCCS---SCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTT
T ss_pred             HHHHHHH----hhcccccceEEeccceeecCCccchhhHHHHh---hhcccccccccccccccceeeHHHHHHHHHHHhc
Confidence            5555554    44578999999999999997543321111000   0111211 12  4578999999999999999998


Q ss_pred             CCCCCc--eEEec-CccccHHHHHHHHHHhCC
Q 023689          244 SPAASG--RYLCT-NGIYQFGDFAERVSKLFP  272 (278)
Q Consensus       244 ~~~~~~--~~~~~-~~~~s~~e~~~~i~~~~~  272 (278)
                      ++...+  .|+++ ++.+|++|+++.+.+.++
T Consensus       209 ~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g  240 (312)
T d1qyda_         209 DPQTLNKTMYIRPPMNILSQKEVIQIWERLSE  240 (312)
T ss_dssp             CGGGSSSEEECCCGGGEEEHHHHHHHHHHHHT
T ss_pred             CccccCceEEEeCCCcCCCHHHHHHHHHHHHC
Confidence            876544  35554 567899999999999874

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.95  E-value=2.9e-27  Score=189.40  Aligned_cols=226  Identities=18%  Similarity=0.136  Sum_probs=162.5

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCC-CCCCceEEEEccCCChhhHHHHhc----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPG-AGDANLRVFEADVLDSGAVSRAVE----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~-~~~~~v~~~~~Dl~d~~~~~~~~~----   79 (278)
                      ++++|++|||||+++||+++++.|.++|+ .|++..|+.+..+.... +.. ....++..+++|++|+++++++++    
T Consensus         1 rl~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~   79 (258)
T d1iy8a_           1 RFTDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTE   79 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHH
Confidence            46899999999999999999999999999 88888887654333211 110 111278899999999999888865    


Q ss_pred             ---CccEEEEecccCCC-----CCCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCcccc
Q 023689           80 ---GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFD  147 (278)
Q Consensus        80 ---~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~  147 (278)
                         ++|++|||||....     +...++|+..+++|+.++..+.+++    ++++-+++|++||..+..+.++.      
T Consensus        80 ~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~------  153 (258)
T d1iy8a_          80 RFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQ------  153 (258)
T ss_dssp             HHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSB------
T ss_pred             HhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCCCc------
Confidence               58999999996533     2244678999999999998888766    44566899999998887665542      


Q ss_pred             CCCCCchhhhhccCchhhhHHHHHHHHHHHHHH---hcCCceEEEecceeeCCCCCCC-----CchhHHHHHHHhhCCCC
Q 023689          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPY-----LNASCAVLQQLLQGSKD  219 (278)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lrp~~i~g~~~~~~-----~~~~~~~~~~~~~~~~~  219 (278)
                                    ..|+.+|...+.+.+.++.   ++||++++|.||.|.++.....     ..........+....| 
T Consensus       154 --------------~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p-  218 (258)
T d1iy8a_         154 --------------SGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNP-  218 (258)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCT-
T ss_pred             --------------hHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCC-
Confidence                          4677777777777776665   4589999999999988742211     0112233334444333 


Q ss_pred             cccccccCcccHHHHHHHHHhhhcCCC--CCceEEecCccc
Q 023689          220 TQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLCTNGIY  258 (278)
Q Consensus       220 ~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~~~~  258 (278)
                           ...+..++|+|+++++++....  -.|+.+..++.+
T Consensus       219 -----l~R~~~p~dvA~~v~fL~S~~s~~itG~~i~VDGG~  254 (258)
T d1iy8a_         219 -----SKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGGQ  254 (258)
T ss_dssp             -----TCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred             -----CCCCcCHHHHHHHHHHHhCchhcCCcCceEEcCcch
Confidence                 3457899999999999986433  356655544443

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.95  E-value=2.7e-27  Score=188.80  Aligned_cols=226  Identities=18%  Similarity=0.177  Sum_probs=162.3

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      ++++|++|||||+++||+++++.|.++|+ .|++..|+.+..+... ++......++.++++|++|+++++++++     
T Consensus         2 ~l~gK~~lITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (251)
T d1vl8a_           2 DLRGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK   80 (251)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            46789999999999999999999999999 8888888765433221 2211112278899999999998888875     


Q ss_pred             --CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeee-cCCCCCCccccC
Q 023689           80 --GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIV-PNPGWKGKVFDE  148 (278)
Q Consensus        80 --~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~-~~~~~~~~~~~E  148 (278)
                        ++|++|||||....    +...++|+..+++|+.++..+.+++    ++++-+++|++||..+.. +.++.       
T Consensus        81 ~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~~~-------  153 (251)
T d1vl8a_          81 FGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNI-------  153 (251)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSC-------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCccc-------
Confidence              58999999997554    2344678999999998888877765    445667999999865532 22221       


Q ss_pred             CCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccc
Q 023689          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (278)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (278)
                                   ..|+.+|...+.+.+.++.+   +|+++++|.||.|-++...... .............|      .
T Consensus       154 -------------~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~-~~~~~~~~~~~~~p------l  213 (251)
T d1vl8a_         154 -------------SAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVF-SDPEKLDYMLKRIP------L  213 (251)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHH-TCHHHHHHHHHTCT------T
T ss_pred             -------------cchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhcc-CCHHHHHHHHhcCC------C
Confidence                         46888888888777777754   5899999999999988643221 11233344444444      3


Q ss_pred             cCcccHHHHHHHHHhhhcCCC--CCceEEecCcccc
Q 023689          226 LGAVPVKDVAKAQVLLFESPA--ASGRYLCTNGIYQ  259 (278)
Q Consensus       226 ~~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~~~~s  259 (278)
                      ..+..++|+|+++++++....  -.|+.+..++.+|
T Consensus       214 ~R~~~pedvA~~v~fL~S~~a~~itG~~i~vDGG~t  249 (251)
T d1vl8a_         214 GRTGVPEDLKGVAVFLASEEAKYVTGQIIFVDGGWT  249 (251)
T ss_dssp             SSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCCCHHHHHHHHHHHhCchhCCCcCcEEEeCcCee
Confidence            456789999999999886433  3576655555554

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.95  E-value=8.9e-27  Score=185.79  Aligned_cols=219  Identities=16%  Similarity=0.126  Sum_probs=158.1

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc------
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~------   79 (278)
                      ++++|++|||||+++||++++++|+++|+ .|++..|+.+..+...+..  + .++.++++|++|+++++++++      
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~~--~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~   77 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGA-RVVLADVLDEEGAATAREL--G-DAARYQHLDVTIEEDWQRVVAYAREEF   77 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTT--G-GGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHh--C-CceEEEEcccCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999999 8888888765544332211  1 278999999999999888875      


Q ss_pred             -CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccCCC
Q 023689           80 -GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (278)
Q Consensus        80 -~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~  150 (278)
                       ++|++|||||....    +...++|+..+++|+.++..+.+++    ++++-+++|++||..+..+.++.         
T Consensus        78 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~~---------  148 (254)
T d1hdca_          78 GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALT---------  148 (254)
T ss_dssp             SCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTC---------
T ss_pred             CCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccch---------
Confidence             57999999987654    2334578899999999888877766    45566899999998887665443         


Q ss_pred             CCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCc-ccc-cc
Q 023689          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT-QEY-HW  225 (278)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~  225 (278)
                                 ..|+.+|...+.+.+.++.+   +||++++|.||.|.++...           +........ ... ..
T Consensus       149 -----------~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~-----------~~~~~~~~~~~~~~pl  206 (254)
T d1hdca_         149 -----------SSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTA-----------ETGIRQGEGNYPNTPM  206 (254)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH-----------HHTCCCSTTSCTTSTT
T ss_pred             -----------hhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCccch-----------hcCHHHHHHHHhCCCC
Confidence                       46888888888877777754   5899999999999776311           111111000 011 11


Q ss_pred             cCc-ccHHHHHHHHHhhhcCCC--CCceEEecCcccc
Q 023689          226 LGA-VPVKDVAKAQVLLFESPA--ASGRYLCTNGIYQ  259 (278)
Q Consensus       226 ~~~-i~~~D~a~~~~~~~~~~~--~~~~~~~~~~~~s  259 (278)
                      ..+ ..++|+|+++++++....  -.|+.+..++.+|
T Consensus       207 ~R~g~~PedvA~~v~fL~S~~a~~itG~~i~vDGG~t  243 (254)
T d1hdca_         207 GRVGNEPGEIAGAVVKLLSDTSSYVTGAELAVDGGWT  243 (254)
T ss_dssp             SSCB-CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             CCCCCCHHHHHHHHHHHhchhhCCCCCceEEeCCCcc
Confidence            223 368999999999986433  3576555444444

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.94  E-value=2.3e-27  Score=190.60  Aligned_cols=227  Identities=19%  Similarity=0.173  Sum_probs=157.6

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCC-CCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS-DSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~-~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      +++|++|||||+++||++++++|.++|+ +|++..|++. ..+.+. .+......++.++.+|++|+++++++++     
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGA-DIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQ   80 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            5789999999999999999999999999 8888887643 222221 1111112278899999999999988875     


Q ss_pred             --CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccCC
Q 023689           80 --GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (278)
Q Consensus        80 --~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~  149 (278)
                        ++|++|||||....    +...++|+..+++|+.++..+.+++    ++++-+++|++||.++..+.++.        
T Consensus        81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~--------  152 (260)
T d1x1ta1          81 MGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANK--------  152 (260)
T ss_dssp             HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTC--------
T ss_pred             hCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccCCc--------
Confidence              57999999997654    2344678999999988887766655    55566899999998887665543        


Q ss_pred             CCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchh---------HHHHHHHhhCC
Q 023689          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNAS---------CAVLQQLLQGS  217 (278)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~---------~~~~~~~~~~~  217 (278)
                                  ..|+.+|...+.+.+.++.+   +||++++|.||.|-++.........         ......+....
T Consensus       153 ------------~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (260)
T d1x1ta1         153 ------------SAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQ  220 (260)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHC
T ss_pred             ------------chhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcC
Confidence                        46888888888777777754   5899999999999888643321100         00000011111


Q ss_pred             CCcccccccCcccHHHHHHHHHhhhcCCC--CCceEEecCccccH
Q 023689          218 KDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLCTNGIYQF  260 (278)
Q Consensus       218 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~~~~s~  260 (278)
                            ....+..++|+|+++++++....  -.|+.+..++.+|.
T Consensus       221 ------Pl~R~g~pediA~~v~fL~S~~a~~itG~~i~vDGG~ta  259 (260)
T d1x1ta1         221 ------PSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGGWTA  259 (260)
T ss_dssp             ------TTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             ------CCCCCcCHHHHHHHHHHHhChhhCCCcCCEEEECcchhc
Confidence                  23457899999999999986433  35766666655553

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.94  E-value=6e-27  Score=187.55  Aligned_cols=217  Identities=16%  Similarity=0.117  Sum_probs=157.4

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      ++++|++|||||+++||+++++.|.++|+ +|++..|+.+..+.+. ++   + .++..+.+|++|+++++++++     
T Consensus         2 ~L~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~---~-~~~~~~~~Dvt~~~~v~~~~~~~~~~   76 (256)
T d1k2wa_           2 RLDGKTALITGSARGIGRAFAEAYVREGA-RVAIADINLEAARATAAEI---G-PAACAIALDVTDQASIDRCVAELLDR   76 (256)
T ss_dssp             TTTTEEEEEETCSSHHHHHHHHHHHHTTE-EEEEEESCHHHHHHHHHHH---C-TTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHh---C-CceEEEEeeCCCHHHHHHHHHHHHHH
Confidence            58899999999999999999999999999 8888888765443332 22   1 278899999999999988875     


Q ss_pred             --CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHHH----hc-CCCEEEEecceeeeecCCCCCCccccC
Q 023689           80 --GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAK----RF-GVRRVVVTSSISAIVPNPGWKGKVFDE  148 (278)
Q Consensus        80 --~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~----~~-~~~~~v~~Ss~~~~~~~~~~~~~~~~E  148 (278)
                        ++|++||+||....    +...++|+..+++|+.++..+.+++.    ++ ..+++|++||.++..+.++.       
T Consensus        77 ~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~-------  149 (256)
T d1k2wa_          77 WGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALV-------  149 (256)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTC-------
T ss_pred             hCCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccccc-------
Confidence              57999999997554    22345789999999999988887642    22 35789999998887665443       


Q ss_pred             CCCCchhhhhccCchhhhHHHHHHHHHHHHHH---hcCCceEEEecceeeCCCCCCCCch--------hHHHHHHHhhCC
Q 023689          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLNA--------SCAVLQQLLQGS  217 (278)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lrp~~i~g~~~~~~~~~--------~~~~~~~~~~~~  217 (278)
                                   ..|+.+|...+.+.+.++.   ++||++++|.||.+-++........        .......+....
T Consensus       150 -------------~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (256)
T d1k2wa_         150 -------------GVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAV  216 (256)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHS
T ss_pred             -------------cchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcC
Confidence                         4688888888777777775   4599999999999998863211000        001112222222


Q ss_pred             CCcccccccCcccHHHHHHHHHhhhcCCC--CCceEEe
Q 023689          218 KDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLC  253 (278)
Q Consensus       218 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~  253 (278)
                      |      ...+..++|+|.++++++....  -.|+.+.
T Consensus       217 P------lgR~~~p~evA~~v~fL~S~~a~~iTG~~i~  248 (256)
T d1k2wa_         217 P------FGRMGRAEDLTGMAIFLATPEADYIVAQTYN  248 (256)
T ss_dssp             T------TSSCBCHHHHHHHHHHTTSGGGTTCCSCEEE
T ss_pred             C------CCCCcCHHHHHHHHHHHhCchhCCccCceEE
Confidence            2      3557899999999999885433  3565443

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.94  E-value=1.6e-27  Score=189.36  Aligned_cols=219  Identities=17%  Similarity=0.139  Sum_probs=158.0

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEe-cCCCCCccccc-CCCCCCCceEEEEccCCChhhHHHHhc-------C
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATV-FPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~-r~~~~~~~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~   80 (278)
                      +.||||||+++||++++++|+++|+ .|++.. |+.+..+.+.+ +...+. ++.++++|++|+++++++++       +
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga-~V~i~~~~~~~~~~~~~~~~~~~g~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   79 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGC-KVLVNYARSAKAAEEVSKQIEAYGG-QAITFGGDVSKEADVEAMMKTAIDAWGT   79 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHTC-EEEEEECCTTSHHHHHHHHHHHHHHSSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHHcCC-cEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            5899999999999999999999999 776654 44433333322 111122 78899999999999888765       5


Q ss_pred             ccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccCCCCC
Q 023689           81 CKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (278)
Q Consensus        81 ~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~  152 (278)
                      +|++||+||....    +...++|+..+++|+.++..+.+++    ++++-+++|++||.++..+.++.           
T Consensus        80 iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~-----------  148 (244)
T d1edoa_          80 IDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQ-----------  148 (244)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTC-----------
T ss_pred             CCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCCC-----------
Confidence            7999999987654    2344678999999998888777665    55567899999998887776553           


Q ss_pred             chhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcc
Q 023689          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (278)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  229 (278)
                               ..|+.+|...+.+.+.++.+   +|+++++|.||.+-++.....   ............|      ...+.
T Consensus       149 ---------~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~---~~~~~~~~~~~~p------l~R~~  210 (244)
T d1edoa_         149 ---------ANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKL---GEDMEKKILGTIP------LGRTG  210 (244)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT---CHHHHHHHHTSCT------TCSCB
T ss_pred             ---------HHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHHh---hHHHHHHHHhcCC------CCCCc
Confidence                     45777777777777776654   599999999999988753332   2233344444333      34578


Q ss_pred             cHHHHHHHHHhhhcCCC---CCceEEecCcccc
Q 023689          230 PVKDVAKAQVLLFESPA---ASGRYLCTNGIYQ  259 (278)
Q Consensus       230 ~~~D~a~~~~~~~~~~~---~~~~~~~~~~~~s  259 (278)
                      .++|+|+++.++..++.   -.|+.+..++.+|
T Consensus       211 ~p~dvA~~v~fLa~S~~a~~itG~~i~vdGG~s  243 (244)
T d1edoa_         211 QPENVAGLVEFLALSPAASYITGQAFTIDGGIA  243 (244)
T ss_dssp             CHHHHHHHHHHHHHCSGGGGCCSCEEEESTTTT
T ss_pred             CHHHHHHHHHHHHCCchhcCCcCCeEEeCCCee
Confidence            99999999999864433   3566665555554

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.94  E-value=6.4e-27  Score=187.63  Aligned_cols=222  Identities=17%  Similarity=0.091  Sum_probs=162.9

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc-------C
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~   80 (278)
                      +|++|||||+++||++++++|.++|+ .|++..|+.+..+... .+...+ .++.++++|++|+++++++++       +
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~l~~~g-~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~   79 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGL-RVFVCARGEEGLRTTLKELREAG-VEADGRTCDVRSVPEIEALVAAVVERYGP   79 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcC-CcEEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            68999999999999999999999999 8888888765443332 222212 278999999999999888875       5


Q ss_pred             ccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHHHh------cCCCEEEEecceeeeecCCCCCCccccCCC
Q 023689           81 CKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKR------FGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (278)
Q Consensus        81 ~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~------~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~  150 (278)
                      +|++|||||....    +...++|+..+++|+.++.++.+++.+      .+.+++|++||..+..+.++.         
T Consensus        80 iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~~---------  150 (257)
T d2rhca1          80 VDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHA---------  150 (257)
T ss_dssp             CSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTTC---------
T ss_pred             CCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccccc---------
Confidence            7999999997654    234457899999999999999998743      355689999998887665543         


Q ss_pred             CCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCC--------CchhHHHHHHHhhCCCC
Q 023689          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPY--------LNASCAVLQQLLQGSKD  219 (278)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~--------~~~~~~~~~~~~~~~~~  219 (278)
                                 ..|+.+|...+.+.+.++.+   +||++++|.||.|-++.....        ..........+....| 
T Consensus       151 -----------~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~P-  218 (257)
T d2rhca1         151 -----------APYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVP-  218 (257)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTST-
T ss_pred             -----------hhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCC-
Confidence                       46888888888888888765   489999999999987642211        0112233344444333 


Q ss_pred             cccccccCcccHHHHHHHHHhhhcCCC--CCceEEecCccc
Q 023689          220 TQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLCTNGIY  258 (278)
Q Consensus       220 ~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~~~~  258 (278)
                           ...+..++|+|+++++++....  -.|+.+..++.+
T Consensus       219 -----lgR~~~pedia~~v~fL~S~~s~~itG~~i~vDGG~  254 (257)
T d2rhca1         219 -----IGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGGL  254 (257)
T ss_dssp             -----TSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             -----CCCCcCHHHHHHHHHHHhCchhcCCcCceEEECcCc
Confidence                 3457899999999999985433  356655444433

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.94  E-value=2.5e-26  Score=184.35  Aligned_cols=225  Identities=13%  Similarity=0.115  Sum_probs=157.6

Q ss_pred             ccCCceEEEeCcch--hhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc----
Q 023689            6 EKEEETVCVTGANG--FIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG--~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~----   79 (278)
                      ++++|++|||||+|  +||++++++|.++|+ +|++..|+++..+.......... ...++++|++|+++++++++    
T Consensus         5 ~L~gK~alITGas~~~GIG~aiA~~la~~Ga-~V~i~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~   82 (256)
T d1ulua_           5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGA-EVALSYQAERLRPEAEKLAEALG-GALLFRADVTQDEELDALFAGVKE   82 (256)
T ss_dssp             CCTTCEEEEESCCCSSSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTT-CCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHhhhccC-cccccccccCCHHHHHHHHHHHHH
Confidence            57899999999998  899999999999999 78877776543333222211122 67789999999998888765    


Q ss_pred             ---CccEEEEecccCCC--------CCCCCchhhhhhhHHhHHHHHHHHHHhc--CCCEEEEecceeeeecCCCCCCccc
Q 023689           80 ---GCKGVFHVASPCTL--------EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVF  146 (278)
Q Consensus        80 ---~~d~vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~  146 (278)
                         ++|++||+|+....        +....+|...+++|+.++..+.+++...  .-+++|++||..+..+.++.     
T Consensus        83 ~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~~~~-----  157 (256)
T d1ulua_          83 AFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKY-----  157 (256)
T ss_dssp             HHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTTC-----
T ss_pred             hcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCCCCCc-----
Confidence               57999999986432        2233457788999999999999887543  23579999998876655442     


Q ss_pred             cCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccc
Q 023689          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (278)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (278)
                                     ..|+.+|...+.+.+.++.+   +|++++++.||.|.++...... .............|     
T Consensus       158 ---------------~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~-~~~~~~~~~~~~~p-----  216 (256)
T d1ulua_         158 ---------------NVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIP-GFTKMYDRVAQTAP-----  216 (256)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-----------CHHHHHHHHHHST-----
T ss_pred             ---------------hHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchh-hhHHHHHHHHhcCC-----
Confidence                           46888888888887777764   5899999999999987654431 12333444444444     


Q ss_pred             cccCcccHHHHHHHHHhhhcCCC--CCceEEecCcccc
Q 023689          224 HWLGAVPVKDVAKAQVLLFESPA--ASGRYLCTNGIYQ  259 (278)
Q Consensus       224 ~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~~~~s  259 (278)
                       ...+..++|+|+++++++....  -.|+.+..++.++
T Consensus       217 -l~R~~~pedvA~~v~fL~S~~s~~itG~~i~VDGG~~  253 (256)
T d1ulua_         217 -LRRNITQEEVGNLGLFLLSPLASGITGEVVYVDAGYH  253 (256)
T ss_dssp             -TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             -CCCCcCHHHHHHHHHHHhCchhCCccCCeEEECcCEe
Confidence             3457789999999999986543  3576665555554

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=6.9e-26  Score=180.07  Aligned_cols=224  Identities=14%  Similarity=0.090  Sum_probs=164.8

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc---C
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---G   80 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---~   80 (278)
                      |.++++|++|||||+++||+++++.|+++|+ +|++..|++++.+.+.+.     .+++...+|+.+.+.++...+   +
T Consensus         1 m~~l~gK~alITGas~GIG~aia~~la~~G~-~Vi~~~r~~~~l~~~~~~-----~~~~~~~~d~~~~~~~~~~~~~~~~   74 (245)
T d2ag5a1           1 MGRLDGKVIILTAAAQGIGQAAALAFAREGA-KVIATDINESKLQELEKY-----PGIQTRVLDVTKKKQIDQFANEVER   74 (245)
T ss_dssp             CCTTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHGGGGGS-----TTEEEEECCTTCHHHHHHHHHHCSC
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhc-----cCCceeeeecccccccccccccccc
Confidence            6679999999999999999999999999999 899999877654444332     178888999988877666554   6


Q ss_pred             ccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeee-ecCCCCCCccccCCCC
Q 023689           81 CKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAI-VPNPGWKGKVFDETSW  151 (278)
Q Consensus        81 ~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~-~~~~~~~~~~~~E~~~  151 (278)
                      +|++||+||....    +...+.|+..+++|+.++..+.+++    .+.+.+++|++||..+. .+.+.           
T Consensus        75 id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~-----------  143 (245)
T d2ag5a1          75 LDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVN-----------  143 (245)
T ss_dssp             CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTT-----------
T ss_pred             ceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCccc-----------
Confidence            8999999997665    2234578999999999998887766    34456789999986552 22221           


Q ss_pred             CchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCC---CchhHHHHHHHhhCCCCcccccc
Q 023689          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPY---LNASCAVLQQLLQGSKDTQEYHW  225 (278)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~  225 (278)
                               ...|+.+|...+.+.+.++.+   +||++++|.||.|-++.....   ...............|      .
T Consensus       144 ---------~~~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~p------l  208 (245)
T d2ag5a1         144 ---------RCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQK------T  208 (245)
T ss_dssp             ---------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCT------T
T ss_pred             ---------hhHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCC------C
Confidence                     156999999999888888865   489999999999988753221   1112233334444433      3


Q ss_pred             cCcccHHHHHHHHHhhhcCCC--CCceEEecCcccc
Q 023689          226 LGAVPVKDVAKAQVLLFESPA--ASGRYLCTNGIYQ  259 (278)
Q Consensus       226 ~~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~~~~s  259 (278)
                      ..+..++|+|+++.+++....  -.|..+..++.+|
T Consensus       209 ~R~~~pedva~~v~fL~s~~s~~iTG~~i~VDGG~s  244 (245)
T d2ag5a1         209 GRFATAEEIAMLCVYLASDESAYVTGNPVIIDGGWS  244 (245)
T ss_dssp             SSCEEHHHHHHHHHHHHSGGGTTCCSCEEEECTTGG
T ss_pred             CCCcCHHHHHHHHHHHhChhhCCCcCceEEeCCCcC
Confidence            557899999999999987543  3577666665555

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.93  E-value=2e-26  Score=189.02  Aligned_cols=225  Identities=16%  Similarity=0.168  Sum_probs=158.2

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc---CCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA---LPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~---~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      .|||||||||||||++++++|+++|+ +|++++|+.........   +......+++++.+|+.+...+.+.+++++.++
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~vi   81 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGH-PTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVI   81 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhhceeee
Confidence            47999999999999999999999999 89999997655432211   000011278899999999999999999999999


Q ss_pred             EecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhh
Q 023689           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYP  165 (278)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~  165 (278)
                      |+++..               +..++.+++++++..+++++++.||......          +.....+.      ..+.
T Consensus        82 ~~~~~~---------------~~~~~~~~~~a~~~~~~~~~~~~s~~~~~~~----------~~~~~~~~------~~~~  130 (307)
T d1qyca_          82 STVGSL---------------QIESQVNIIKAIKEVGTVKRFFPSEFGNDVD----------NVHAVEPA------KSVF  130 (307)
T ss_dssp             ECCCGG---------------GSGGGHHHHHHHHHHCCCSEEECSCCSSCTT----------SCCCCTTH------HHHH
T ss_pred             eccccc---------------ccchhhHHHHHHHHhccccceeeeccccccc----------cccccccc------cccc
Confidence            987642               2334567888898888888888886332111          11111111      2355


Q ss_pred             hHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcc---cccccCcccHHHHHHHHHhhh
Q 023689          166 VSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ---EYHWLGAVPVKDVAKAQVLLF  242 (278)
Q Consensus       166 ~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~D~a~~~~~~~  242 (278)
                      ..+...+..+    .+.+++++++||+.+||+.......    ++.....+.....   +++.++++|++|+|++++.++
T Consensus       131 ~~~~~~~~~~----~~~~~~~~i~r~~~v~g~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l  202 (307)
T d1qyca_         131 EVKAKVRRAI----EAEGIPYTYVSSNCFAGYFLRSLAQ----AGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAV  202 (307)
T ss_dssp             HHHHHHHHHH----HHHTCCBEEEECCEEHHHHTTTTTC----TTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTS
T ss_pred             cccccccchh----hccCCCceecccceecCCCccchhh----hhhhhhhcccceeeecccccccCCcHHHHHHHHHHHh
Confidence            5555555544    3679999999999999986543211    1111122222221   457899999999999999999


Q ss_pred             cCCCCCc--eEEe-cCccccHHHHHHHHHHhCCC
Q 023689          243 ESPAASG--RYLC-TNGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       243 ~~~~~~~--~~~~-~~~~~s~~e~~~~i~~~~~~  273 (278)
                      .++...+  .|++ +++.+|+.|+++.+.+.++.
T Consensus       203 ~~~~~~~~~~~~~~~~~~~s~~ei~~~~~~~~G~  236 (307)
T d1qyca_         203 DDPRTLNKTLYLRLPANTLSLNELVALWEKKIDK  236 (307)
T ss_dssp             SCGGGTTEEEECCCGGGEEEHHHHHHHHHHHTTS
T ss_pred             cChhhcCceeEEeCCCCccCHHHHHHHHHHHHCC
Confidence            8876544  4654 46789999999999999864

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=5.5e-26  Score=181.90  Aligned_cols=217  Identities=14%  Similarity=0.138  Sum_probs=154.5

Q ss_pred             ccccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCC-CCCceEEEEccCCChhhHHHHhc
Q 023689            2 ASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGA-GDANLRVFEADVLDSGAVSRAVE   79 (278)
Q Consensus         2 ~~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~-~~~~v~~~~~Dl~d~~~~~~~~~   79 (278)
                      +.|..+++|++|||||+++||+++++.|.++|+ .|++..|+.++.+.+. ++... .+.++.++++|++|+++++++++
T Consensus         3 ~~M~~lk~Kv~lITGas~GIG~aiA~~la~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~   81 (257)
T d1xg5a_           3 PGMERWRDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFS   81 (257)
T ss_dssp             TTCGGGTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHH
Confidence            468889999999999999999999999999999 8888888765544332 12111 11278899999999998888765


Q ss_pred             -------CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHH----HhcC--CCEEEEecceeeeecCCCCC
Q 023689           80 -------GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFG--VRRVVVTSSISAIVPNPGWK  142 (278)
Q Consensus        80 -------~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~--~~~~v~~Ss~~~~~~~~~~~  142 (278)
                             ++|++||||+....    +...+.|+..+++|+.+...+.+++    ++++  -+++|++||.++....+.. 
T Consensus        82 ~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~~-  160 (257)
T d1xg5a_          82 AIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLS-  160 (257)
T ss_dssp             HHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCG-
T ss_pred             HHHHhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCCc-
Confidence                   57999999987654    2334678999999998888776655    4443  4789999997764332221 


Q ss_pred             CccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHH-----hcCCceEEEecceeeCCCCCCCCc-hhHHHHHHHhhC
Q 023689          143 GKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAE-----KHGVDVVAIHPATCLGPLMQPYLN-ASCAVLQQLLQG  216 (278)
Q Consensus       143 ~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~-----~~~~~~~~lrp~~i~g~~~~~~~~-~~~~~~~~~~~~  216 (278)
                                 .      ...|+.+|...+.+.+.++.     .++|+++++.||.+-++....... .........   
T Consensus       161 -----------~------~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~~~~~~~~~---  220 (257)
T d1xg5a_         161 -----------V------THFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATY---  220 (257)
T ss_dssp             -----------G------GHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHHH---
T ss_pred             -----------c------cHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChhhHHHHHhcC---
Confidence                       0      13588888888888777764     458999999999887664221111 111111111   


Q ss_pred             CCCcccccccCcccHHHHHHHHHhhhcCCCC
Q 023689          217 SKDTQEYHWLGAVPVKDVAKAQVLLFESPAA  247 (278)
Q Consensus       217 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  247 (278)
                             ....++.++|+|+++++++..+..
T Consensus       221 -------~~~r~~~pedvA~~v~fL~s~~a~  244 (257)
T d1xg5a_         221 -------EQMKCLKPEDVAEAVIYVLSTPAH  244 (257)
T ss_dssp             -------C---CBCHHHHHHHHHHHHHSCTT
T ss_pred             -------CCCCCcCHHHHHHHHHHHhCChhc
Confidence                   135578999999999999877543

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.93  E-value=1.8e-25  Score=176.56  Aligned_cols=215  Identities=15%  Similarity=0.081  Sum_probs=153.5

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCCh-hhHHHHhcCccEEE
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS-GAVSRAVEGCKGVF   85 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~-~~~~~~~~~~d~vi   85 (278)
                      +++|++|||||+++||+++++.|.++|+ +|++..|+++..+.   .      ..+++.+|+++. +.+.+.+.++|++|
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga-~V~~~~r~~~~l~~---~------~~~~~~~Dv~~~~~~~~~~~g~iD~lV   71 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGA-EVTICARNEELLKR---S------GHRYVVCDLRKDLDLLFEKVKEVDILV   71 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHH---T------CSEEEECCTTTCHHHHHHHSCCCSEEE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHh---c------CCcEEEcchHHHHHHHHHHhCCCcEEE
Confidence            4689999999999999999999999999 89888887643322   2      556788999874 44555566899999


Q ss_pred             EecccCCC----CCCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhh
Q 023689           86 HVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYC  157 (278)
Q Consensus        86 ~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~  157 (278)
                      |+||....    +...++|+..+++|+.++..+.+++    ++++.+++|++||..+..+.+..                
T Consensus        72 nnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~~----------------  135 (234)
T d1o5ia_          72 LNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENL----------------  135 (234)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTB----------------
T ss_pred             ecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhccccccccccccccccccccccccccccc----------------
Confidence            99986554    2234567888999998877766655    55566789999987765544332                


Q ss_pred             hccCchhhhHHHHHHHHHHHHHH---hcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHHHH
Q 023689          158 KSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDV  234 (278)
Q Consensus       158 ~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  234 (278)
                          ..|+.+|...+.+.+.++.   ++||++++|.||.+.++......  ............|      ...+..++|+
T Consensus       136 ----~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~--~~~~~~~~~~~~p------l~R~~~pedi  203 (234)
T d1o5ia_         136 ----YTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELL--SEEKKKQVESQIP------MRRMAKPEEI  203 (234)
T ss_dssp             ----HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHS--CHHHHHHHHTTST------TSSCBCHHHH
T ss_pred             ----ccchhHHHHHHHHHHHHHHHhcccCeEEeecccCccchhhhhhhc--CHHHHHHHHhcCC------CCCCcCHHHH
Confidence                3577777777766666665   45999999999999887643221  1122233333333      3567899999


Q ss_pred             HHHHHhhhcCCC--CCceEEecCcccc
Q 023689          235 AKAQVLLFESPA--ASGRYLCTNGIYQ  259 (278)
Q Consensus       235 a~~~~~~~~~~~--~~~~~~~~~~~~s  259 (278)
                      |+++++++....  -.|+.+..++.+|
T Consensus       204 A~~v~fL~S~~s~~itG~~i~vDGG~s  230 (234)
T d1o5ia_         204 ASVVAFLCSEKASYLTGQTIVVDGGLS  230 (234)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             HHHHHHHhChhhcCCcCcEEEECcccc
Confidence            999999986433  3576655555444

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.93  E-value=3.3e-26  Score=183.17  Aligned_cols=219  Identities=20%  Similarity=0.199  Sum_probs=154.1

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCCCCCCceEEEEccCCChhhHHHHhc-------Cc
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~   81 (278)
                      |.+|||||+++||++++++|.++|+ .|++..|+++..+.+.. +...+. ++..+++|++|+++++++++       ++
T Consensus         2 KValITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~i~~~g~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   79 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGF-AVAIADYNDATAKAVASEINQAGG-HAVAVKVDVSDRDQVFAAVEQARKTLGGF   79 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHTTCC
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCC-cEEEEEeeCCCHHHHHHHHHHHHHHhCCc
Confidence            4579999999999999999999999 88888887765443322 221122 78999999999999888865       57


Q ss_pred             cEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHH----HhcC-CCEEEEecceeeeecCCCCCCccccCCCCC
Q 023689           82 KGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFG-VRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (278)
Q Consensus        82 d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~  152 (278)
                      |++|||||....    +...++|+..+++|+.++.++.+++    .+.+ .+++|++||.++..+.++.           
T Consensus        80 DilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~-----------  148 (255)
T d1gega_          80 DVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPEL-----------  148 (255)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTB-----------
T ss_pred             cEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCccc-----------
Confidence            999999997554    2344678899999999998888765    3333 4679999998876655442           


Q ss_pred             chhhhhccCchhhhHHHHHHHHHHHHHH---hcCCceEEEecceeeCCCCCCCCc--------hhHHHHHHHhhCCCCcc
Q 023689          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLN--------ASCAVLQQLLQGSKDTQ  221 (278)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lrp~~i~g~~~~~~~~--------~~~~~~~~~~~~~~~~~  221 (278)
                               ..|+.+|...+.+.+.++.   ++||++++|.||.|-++.......        ........+....|   
T Consensus       149 ---------~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---  216 (255)
T d1gega_         149 ---------AVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRIT---  216 (255)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCT---
T ss_pred             ---------ccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCC---
Confidence                     4577777777777777665   459999999999997764221100        00111122222222   


Q ss_pred             cccccCcccHHHHHHHHHhhhcCCC--CCceEEecCc
Q 023689          222 EYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLCTNG  256 (278)
Q Consensus       222 ~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~~  256 (278)
                         ...+..++|+|+++++++....  -.|..+..++
T Consensus       217 ---l~R~~~peevA~~v~fL~S~~a~~itG~~i~vDG  250 (255)
T d1gega_         217 ---LGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDG  250 (255)
T ss_dssp             ---TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             ---CCCCcCHHHHHHHHHHHhCchhCCccCcEEEecC
Confidence               3457899999999999986433  3566554443

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.93  E-value=1e-25  Score=180.89  Aligned_cols=230  Identities=17%  Similarity=0.164  Sum_probs=159.6

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      ++++|++|||||+++||+++++.|.++|+ +|++..|+.+...... ++......++..+++|++|+++++++++     
T Consensus         6 ~l~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   84 (260)
T d1h5qa_           6 SFVNKTIIVTGGNRGIGLAFTRAVAAAGA-NVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDAD   84 (260)
T ss_dssp             CCTTEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            78999999999999999999999999999 8989999876643321 2211111278999999999999888875     


Q ss_pred             --CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHHH----h-cCCCEEEEecceeeeecCCCCCCccccC
Q 023689           80 --GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAK----R-FGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (278)
Q Consensus        80 --~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~----~-~~~~~~v~~Ss~~~~~~~~~~~~~~~~E  148 (278)
                        ++|++||||+....    +...++|+..+++|+.++..+.+++.    + .+.+.++..||..........    +  
T Consensus        85 ~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~----~--  158 (260)
T d1h5qa_          85 LGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSS----L--  158 (260)
T ss_dssp             SCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEE----T--
T ss_pred             hCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccc----c--
Confidence              57999999987554    23345788999999998888776552    2 344566666664432221100    0  


Q ss_pred             CCCCchhhhhccCchhhhHHHHHHHHHHHHHH---hcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccc
Q 023689          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (278)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (278)
                             ........|+.+|...+.+.+.++.   ++|+++++|.||.|-++.....   ............|      .
T Consensus       159 -------~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~---~~~~~~~~~~~~p------l  222 (260)
T d1h5qa_         159 -------NGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM---DKKIRDHQASNIP------L  222 (260)
T ss_dssp             -------TEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS---CHHHHHHHHHTCT------T
T ss_pred             -------ccCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhcc---CHHHHHHHHhcCC------C
Confidence                   0011124688888888888777775   4589999999999988764433   2334444444444      3


Q ss_pred             cCcccHHHHHHHHHhhhcCCC--CCceEEecCccc
Q 023689          226 LGAVPVKDVAKAQVLLFESPA--ASGRYLCTNGIY  258 (278)
Q Consensus       226 ~~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~~~~  258 (278)
                      ..+..++|+|+++++++....  -.|+.+..++..
T Consensus       223 ~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG~  257 (260)
T d1h5qa_         223 NRFAQPEEMTGQAILLLSDHATYMTGGEYFIDGGQ  257 (260)
T ss_dssp             SSCBCGGGGHHHHHHHHSGGGTTCCSCEEEECTTG
T ss_pred             CCCcCHHHHHHHHHHHhcchhCCCcCceEEECCCe
Confidence            457789999999999986433  357655444443

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.93  E-value=7.7e-26  Score=179.13  Aligned_cols=198  Identities=15%  Similarity=0.107  Sum_probs=148.6

Q ss_pred             eEEEeCcchhhHHHHHHHHHHCCCC------eEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc----
Q 023689           11 TVCVTGANGFIGTWLVKTLLDNNYT------SINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (278)
Q Consensus        11 ~vlItGatG~iG~~l~~~L~~~g~~------~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~----   79 (278)
                      .||||||+++||++++++|.++|++      .|+...|+.+..+.+. ++...+. ++.++.+|++|+++++++++    
T Consensus         3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~-~~~~~~~Dvt~~~~v~~~~~~~~~   81 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGA-LTDTITADISDMADVRRLTTHIVE   81 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTC-EEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHH
Confidence            5899999999999999999999983      2777788765544332 2222222 78899999999998888775    


Q ss_pred             ---CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccC
Q 023689           80 ---GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (278)
Q Consensus        80 ---~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E  148 (278)
                         ++|++|||||....    +...++|+..+++|+.++..+.+++    ++++-+++|++||.++..+.++.       
T Consensus        82 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~-------  154 (240)
T d2bd0a1          82 RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHS-------  154 (240)
T ss_dssp             HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTC-------
T ss_pred             HcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCCCC-------
Confidence               57999999997654    2234678999999998888766665    55566899999998887665543       


Q ss_pred             CCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccc
Q 023689          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (278)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (278)
                                   ..|+.+|...+.+.+.++.+   +|++++++.||.|-++........                  ..
T Consensus       155 -------------~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~~~------------------~~  203 (240)
T d2bd0a1         155 -------------SIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDE------------------MQ  203 (240)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCST------------------TG
T ss_pred             -------------hHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcCHh------------------hH
Confidence                         46888887777777776654   599999999999998864332110                  12


Q ss_pred             cCcccHHHHHHHHHhhhcCCCC
Q 023689          226 LGAVPVKDVAKAQVLLFESPAA  247 (278)
Q Consensus       226 ~~~i~~~D~a~~~~~~~~~~~~  247 (278)
                      ..+..++|+|+++++++.++..
T Consensus       204 ~~~~~PedvA~~v~~l~s~~~~  225 (240)
T d2bd0a1         204 ALMMMPEDIAAPVVQAYLQPSR  225 (240)
T ss_dssp             GGSBCHHHHHHHHHHHHTSCTT
T ss_pred             hcCCCHHHHHHHHHHHHcCCcc
Confidence            2356789999999999887553

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.93  E-value=3.4e-26  Score=182.64  Aligned_cols=222  Identities=17%  Similarity=0.161  Sum_probs=155.1

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      ++++|++|||||+++||+++++.|+++|+ .|++..|+.+..+.+. ++.    .+..++++|++|+++++++++     
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~~~~~~~~~~~~   77 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGA-KVAFSDINEAAGQQLAAELG----ERSMFVRHDVSSEADWTLVMAAVQRR   77 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHC----TTEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhC----CCeEEEEeecCCHHHHHHHHHHHHHH
Confidence            57899999999999999999999999999 8888888765443332 221    178899999999988888775     


Q ss_pred             --CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccCC
Q 023689           80 --GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (278)
Q Consensus        80 --~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~  149 (278)
                        ++|++||+||....    +...++|+..+++|+.++..+.+++    ++++ +++|++||.++..+.+..        
T Consensus        78 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-G~Iv~isS~~~~~~~~~~--------  148 (253)
T d1hxha_          78 LGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQY--------  148 (253)
T ss_dssp             HCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCTTB--------
T ss_pred             hCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC-CceecccchhhhcCcccc--------
Confidence              57999999997554    2334578999999998888777766    3334 789999998886655442        


Q ss_pred             CCCchhhhhccCchhhhHHHHHHHHHHHHHHh-----cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccc
Q 023689          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK-----HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (278)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-----~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (278)
                                  ..|+.+|...+.+.+.++.+     ++|++++|.||.|.++........  ...++.....+...  .
T Consensus       149 ------------~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~--~~~~~~~~~~~~~~--~  212 (253)
T d1hxha_         149 ------------AGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPK--GVSKEMVLHDPKLN--R  212 (253)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCT--TCCHHHHBCBTTTB--T
T ss_pred             ------------ccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcc--hhhHHHHHhCcccc--c
Confidence                        46888887777776666543     469999999999988642111000  00011111111111  1


Q ss_pred             ccCcccHHHHHHHHHhhhcCCC--CCceEEecCcc
Q 023689          225 WLGAVPVKDVAKAQVLLFESPA--ASGRYLCTNGI  257 (278)
Q Consensus       225 ~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~~~  257 (278)
                      .-.+..++|+|+++++++....  -.|+.+..|+.
T Consensus       213 ~gr~~~pedvA~~v~fL~S~~s~~itG~~i~VDGG  247 (253)
T d1hxha_         213 AGRAYMPERIAQLVLFLASDESSVMSGSELHADNS  247 (253)
T ss_dssp             TCCEECHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             cCCCCCHHHHHHHHHHHhChhhCCCcCcEEEECcc
Confidence            2357789999999999986433  35765444443

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.9e-25  Score=182.14  Aligned_cols=226  Identities=13%  Similarity=0.067  Sum_probs=157.0

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccc----c-cCCCCCCCceEEEEccCCChhhHHHHhc-
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL----F-ALPGAGDANLRVFEADVLDSGAVSRAVE-   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~----~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-   79 (278)
                      .+++|++|||||+++||+++++.|.++|+ .|++..|+.+..+..    . .+......++..+.+|++|+++++++++ 
T Consensus         9 ~L~gKvalITGas~GIG~aia~~la~~Ga-~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~   87 (297)
T d1yxma1           9 LLQGQVAIVTGGATGIGKAIVKELLELGS-NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS   87 (297)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHH
Confidence            47899999999999999999999999999 888888876543222    1 1222222378999999999999888775 


Q ss_pred             ------CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHHH----hcCCCEEEEecceeeeecCCCCCCcc
Q 023689           80 ------GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKV  145 (278)
Q Consensus        80 ------~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~  145 (278)
                            ++|++||+|+....    +...++|+..+++|+.++..+.+++.    +++.+.+|++|| +...+.+.     
T Consensus        88 ~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss-~~~~~~~~-----  161 (297)
T d1yxma1          88 TLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIV-PTKAGFPL-----  161 (297)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECC-CCTTCCTT-----
T ss_pred             HHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccc-cccccccc-----
Confidence                  57999999986554    23345788999999999988888763    334567888765 33222222     


Q ss_pred             ccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCc-hhHHHHHHHhhCCCCcc
Q 023689          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN-ASCAVLQQLLQGSKDTQ  221 (278)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~-~~~~~~~~~~~~~~~~~  221 (278)
                                     ...|+.+|...+.+.+.++.+   +||++++|.||.|.++....... .............|   
T Consensus       162 ---------------~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~p---  223 (297)
T d1yxma1         162 ---------------AVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIP---  223 (297)
T ss_dssp             ---------------CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGST---
T ss_pred             ---------------cccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCC---
Confidence                           146888888888887777754   58999999999999886433211 11111111112112   


Q ss_pred             cccccCcccHHHHHHHHHhhhcCCC--CCceEEecCcccc
Q 023689          222 EYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLCTNGIYQ  259 (278)
Q Consensus       222 ~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~~~~s  259 (278)
                         ...+..++|+|.++++++....  -.|+.+..++.+|
T Consensus       224 ---lgR~g~pedvA~~v~fL~Sd~s~~iTG~~i~VDGG~s  260 (297)
T d1yxma1         224 ---AKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGGRS  260 (297)
T ss_dssp             ---TSSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             ---CCCCcCHHHHHHHHHHHhCchhcCcCCcEEEeCcChh
Confidence               3457789999999999986433  3565544444443

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.93  E-value=1.9e-25  Score=177.06  Aligned_cols=220  Identities=22%  Similarity=0.177  Sum_probs=157.4

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc------
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~------   79 (278)
                      ++++|++|||||+++||+++++.|.++|+ +|++..|+.++.+...+-.  + .++.++++|++++++++++++      
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~--~-~~~~~~~~Dls~~~~i~~~~~~i~~~~   77 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGA-SLVAVDREERLLAEAVAAL--E-AEAIAVVADVSDPKAVEAVFAEALEEF   77 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTC--C-SSEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHc--C-CceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            47899999999999999999999999999 8988888776543332211  1 278899999999999888765      


Q ss_pred             -CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHHHhc--CCCEEEEecceeeeecCCCCCCccccCCCCC
Q 023689           80 -GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (278)
Q Consensus        80 -~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~  152 (278)
                       ++|++||+|+....    +...+.|+..+++|+.+...+.+++...  +.+.++++|| .+....++            
T Consensus        78 g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss-~a~~~~~~------------  144 (241)
T d2a4ka1          78 GRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGS-VAGLGAFG------------  144 (241)
T ss_dssp             SCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECC-CTTCCHHH------------
T ss_pred             CCccEeccccccccccchhhhhccccccccccccccccccccccccccccccceeeccc-cccccccC------------
Confidence             57999999987554    2334577899999999999999987554  3344555554 33211111            


Q ss_pred             chhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcc
Q 023689          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (278)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  229 (278)
                         +     ..|+.+|.+.+.+.+.++++   +|+++++|.||.+-++.....   ......+.....|      ...+.
T Consensus       145 ---~-----~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~---~~~~~~~~~~~~p------~~r~~  207 (241)
T d2a4ka1         145 ---L-----AHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGL---PPWAWEQEVGASP------LGRAG  207 (241)
T ss_dssp             ---H-----HHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTS---CHHHHHHHHHTST------TCSCB
T ss_pred             ---c-----cccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhh---hHhHHHHHHhCCC------CCCCc
Confidence               1     35777777777777777665   479999999999988754332   2344445544444      34577


Q ss_pred             cHHHHHHHHHhhhcCCC--CCceEEecCcccc
Q 023689          230 PVKDVAKAQVLLFESPA--ASGRYLCTNGIYQ  259 (278)
Q Consensus       230 ~~~D~a~~~~~~~~~~~--~~~~~~~~~~~~s  259 (278)
                      .++|+|+++.+++....  -.|..+..++.+|
T Consensus       208 ~p~dva~~v~fL~S~~s~~itG~~i~vDGG~s  239 (241)
T d2a4ka1         208 RPEEVAQAALFLLSEESAYITGQALYVDGGRS  239 (241)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             CHHHHHHHHHHHhcchhCCCcCceEEeCCCcc
Confidence            99999999999996533  4576655555444

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.93  E-value=2e-25  Score=178.25  Aligned_cols=216  Identities=16%  Similarity=0.107  Sum_probs=151.8

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCC-CCCCceEEEEccCC-ChhhHHHHhc----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPG-AGDANLRVFEADVL-DSGAVSRAVE----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~-~~~~~v~~~~~Dl~-d~~~~~~~~~----   79 (278)
                      ++++|+||||||+++||..++++|+++|+ .|+++.|+.+..+.+.++.. ....++.++.+|++ +.++++++++    
T Consensus         2 ~l~gK~vlITGgs~GIG~~~A~~la~~G~-~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   80 (254)
T d1sbya1           2 DLTNKNVIFVAALGGIGLDTSRELVKRNL-KNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD   80 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCC-SEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHH
Confidence            57899999999999999999999999999 77777676655443332211 12227899999998 5556666654    


Q ss_pred             ---CccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHh----c---CCCEEEEecceeeeecCCCCCCccccCC
Q 023689           80 ---GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKR----F---GVRRVVVTSSISAIVPNPGWKGKVFDET  149 (278)
Q Consensus        80 ---~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~----~---~~~~~v~~Ss~~~~~~~~~~~~~~~~E~  149 (278)
                         ++|++|||||...    .+.|+..+++|+.|+.++.+++.+    +   +.+++|++||..+..+.++.        
T Consensus        81 ~~g~iDilvnnAG~~~----~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~~--------  148 (254)
T d1sbya1          81 QLKTVDILINGAGILD----DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQV--------  148 (254)
T ss_dssp             HHSCCCEEEECCCCCC----TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTS--------
T ss_pred             HcCCCCEEEeCCCCCC----HHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCCC--------
Confidence               6899999999754    477899999999988888876633    2   24679999998887765553        


Q ss_pred             CCCchhhhhccCchhhhHHHHHHHHHHHHHH---hcCCceEEEecceeeCCCCCCCCc--hhHHHHHHHhhCCCCccccc
Q 023689          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLN--ASCAVLQQLLQGSKDTQEYH  224 (278)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lrp~~i~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  224 (278)
                                  ..|+.+|.....+.+.++.   ++||++++|.||.|.++..+....  .....+.+...         
T Consensus       149 ------------~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~---------  207 (254)
T d1sbya1         149 ------------PVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLL---------  207 (254)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHT---------
T ss_pred             ------------HHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHhccc---------
Confidence                        4577777777766666665   459999999999999874221100  01111111111         


Q ss_pred             ccCcccHHHHHHHHHhhhcCCCCCc-eEEecCc
Q 023689          225 WLGAVPVKDVAKAQVLLFESPAASG-RYLCTNG  256 (278)
Q Consensus       225 ~~~~i~~~D~a~~~~~~~~~~~~~~-~~~~~~~  256 (278)
                      .+....++++|++++.++++.. .| .+.+.++
T Consensus       208 ~~~~~~~e~va~~~~~~~~~~~-tG~vi~vdgG  239 (254)
T d1sbya1         208 SHPTQTSEQCGQNFVKAIEANK-NGAIWKLDLG  239 (254)
T ss_dssp             TSCCEEHHHHHHHHHHHHHHCC-TTCEEEEETT
T ss_pred             cCCCCCHHHHHHHHHHhhhCCC-CCCEEEECCC
Confidence            2345689999999998887654 45 4555554

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.93  E-value=4.3e-25  Score=178.31  Aligned_cols=230  Identities=13%  Similarity=0.154  Sum_probs=154.5

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCC--CCCCceEEEEccCCChhhHHHHhc---
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPG--AGDANLRVFEADVLDSGAVSRAVE---   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~--~~~~~v~~~~~Dl~d~~~~~~~~~---   79 (278)
                      ++++|++|||||+++||+++++.|.++|+ .|++..|+.+..+.... +..  ....++..+++|++|+++++++++   
T Consensus         2 rL~gK~alVTGas~GIG~aia~~la~~Ga-~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~   80 (272)
T d1xkqa_           2 RFSNKTVIITGSSNGIGRTTAILFAQEGA-NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTL   80 (272)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHH
Confidence            57899999999999999999999999999 89989887655433221 111  111268999999999999888775   


Q ss_pred             ----CccEEEEecccCCCCCC--------CCchhhhhhhHHhHHHHHHHHHHh----cCCCEEEEecc-eeeeecCCCCC
Q 023689           80 ----GCKGVFHVASPCTLEDP--------VDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSS-ISAIVPNPGWK  142 (278)
Q Consensus        80 ----~~d~vi~~a~~~~~~~~--------~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~v~~Ss-~~~~~~~~~~~  142 (278)
                          ++|++|||||.......        .+.|+..+++|+.++..+.+++.+    ++ +.+|+++| .++..+.++. 
T Consensus        81 ~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~Ss~a~~~~~~~~-  158 (272)
T d1xkqa_          81 KQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPDF-  158 (272)
T ss_dssp             HHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCCCSS-
T ss_pred             HHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccC-CccccccchhccccCCCCc-
Confidence                57999999997654211        124788899999988888777633    33 34555554 4444444432 


Q ss_pred             CccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHH---hcCCceEEEecceeeCCCCCCCC--chhHHHHHHHhhCC
Q 023689          143 GKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYL--NASCAVLQQLLQGS  217 (278)
Q Consensus       143 ~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lrp~~i~g~~~~~~~--~~~~~~~~~~~~~~  217 (278)
                                         ..|+.+|...+.+.+.++.   ++||++++|.||.|-++......  .....-........
T Consensus       159 -------------------~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~  219 (272)
T d1xkqa_         159 -------------------LYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASH  219 (272)
T ss_dssp             -------------------HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHC
T ss_pred             -------------------chhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHH
Confidence                               4578888877777777765   45999999999999887532221  11111111111111


Q ss_pred             CCcccccccCcccHHHHHHHHHhhhcCC---CCCceEEecCcccc
Q 023689          218 KDTQEYHWLGAVPVKDVAKAQVLLFESP---AASGRYLCTNGIYQ  259 (278)
Q Consensus       218 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~---~~~~~~~~~~~~~s  259 (278)
                      ....|  ...+..++|+|+++++++...   .-.|+.+..++.++
T Consensus       220 ~~~~P--lgR~g~pediA~~v~fL~S~~as~~iTG~~i~vDGG~~  262 (272)
T d1xkqa_         220 KECIP--IGAAGKPEHIANIILFLADRNLSFYILGQSIVADGGTS  262 (272)
T ss_dssp             TTTCT--TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred             hcCCC--CCCCcCHHHHHHHHHHHhCcchhCCccCeEEEeCcCHH
Confidence            11111  345789999999999998532   24677665555544

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.93  E-value=2.5e-25  Score=178.99  Aligned_cols=226  Identities=14%  Similarity=0.153  Sum_probs=151.8

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CC--CCCCCceEEEEccCCChhhHHHHhc---
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LP--GAGDANLRVFEADVLDSGAVSRAVE---   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~--~~~~~~v~~~~~Dl~d~~~~~~~~~---   79 (278)
                      ++++|++|||||+++||++++++|.++|+ +|++..|+.+..+.... +.  +....++.++.+|++|+++++++++   
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~   80 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTL   80 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHH
Confidence            57899999999999999999999999999 88888887655433221 11  1111268999999999999888875   


Q ss_pred             ----CccEEEEecccCCCC--------CCCCchhhhhhhHHhHHHHHHHHHH----hcCCCEEEEeccee-eeecCCCCC
Q 023689           80 ----GCKGVFHVASPCTLE--------DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSIS-AIVPNPGWK  142 (278)
Q Consensus        80 ----~~d~vi~~a~~~~~~--------~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~v~~Ss~~-~~~~~~~~~  142 (278)
                          ++|++|||||.....        ...++|+..+++|+.++..+.+++.    +.+ +.+|+++|.. +..+.++. 
T Consensus        81 ~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~S~~~~~~~~~~~-  158 (264)
T d1spxa_          81 GKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDF-  158 (264)
T ss_dssp             HHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTTS-
T ss_pred             HHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc-CcceeeeeeccccccCCCc-
Confidence                579999999864321        1234688899999998888777663    333 4566666544 34443332 


Q ss_pred             CccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHH---hcCCceEEEecceeeCCCCCCCC------chhHHHHHHH
Q 023689          143 GKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYL------NASCAVLQQL  213 (278)
Q Consensus       143 ~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lrp~~i~g~~~~~~~------~~~~~~~~~~  213 (278)
                                         ..|+.+|...+.+.+.++.   .+||++++|.||.|-++......      .........+
T Consensus       159 -------------------~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  219 (264)
T d1spxa_         159 -------------------PYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATM  219 (264)
T ss_dssp             -------------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHH
T ss_pred             -------------------hhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHH
Confidence                               4578888877777777665   45999999999999887543221      0111122222


Q ss_pred             hhCCCCcccccccCcccHHHHHHHHHhhhcCC---CCCceEEecCcccc
Q 023689          214 LQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP---AASGRYLCTNGIYQ  259 (278)
Q Consensus       214 ~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~---~~~~~~~~~~~~~s  259 (278)
                      ....|      ...+..++|+|+++++++.++   .-.|+.+..++.++
T Consensus       220 ~~~~P------l~R~g~pedvA~~v~fL~S~~~s~~itG~~i~vDGG~s  262 (264)
T d1spxa_         220 KECVP------AGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSS  262 (264)
T ss_dssp             HHHCT------TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred             HhcCC------CCCCcCHHHHHHHHHHHhCCcccCCccCceEEeCCChh
Confidence            22222      345778999999999998633   24676655555444

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.93  E-value=3.6e-25  Score=178.86  Aligned_cols=230  Identities=14%  Similarity=0.152  Sum_probs=156.2

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCC--CCCCceEEEEccCCChhhHHHHhc---
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPG--AGDANLRVFEADVLDSGAVSRAVE---   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~--~~~~~v~~~~~Dl~d~~~~~~~~~---   79 (278)
                      ++++|++|||||+++||++++++|.++|+ +|++..|+.+..+.... +..  ....++..+.+|++|+++++++++   
T Consensus         1 rL~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   79 (274)
T d1xhla_           1 RFSGKSVIITGSSNGIGRSAAVIFAKEGA-QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTL   79 (274)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHH
Confidence            46899999999999999999999999999 88888887654433221 111  111268999999999998888775   


Q ss_pred             ----CccEEEEecccCCCCC------CCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCcc
Q 023689           80 ----GCKGVFHVASPCTLED------PVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKV  145 (278)
Q Consensus        80 ----~~d~vi~~a~~~~~~~------~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~  145 (278)
                          ++|++||+||......      ..+.|+..+++|+.++..+.+++    ++++-+.++++||.++..+.++.    
T Consensus        80 ~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~~~----  155 (274)
T d1xhla_          80 AKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGY----  155 (274)
T ss_dssp             HHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTS----
T ss_pred             HHcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCCCC----
Confidence                5799999998644321      22457889999999888877766    44455678888876665544432    


Q ss_pred             ccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHH---hcCCceEEEecceeeCCCCCCCC--chhHHHHHHHhhCCCCc
Q 023689          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYL--NASCAVLQQLLQGSKDT  220 (278)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lrp~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~  220 (278)
                                      ..|+.+|...+.+.+.++.   ++||++++|.||.|.++......  .....-..+........
T Consensus       156 ----------------~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (274)
T d1xhla_         156 ----------------PYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKEC  219 (274)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTT
T ss_pred             ----------------ceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcC
Confidence                            4577777777777766665   45999999999999887532221  11111112222111111


Q ss_pred             ccccccCcccHHHHHHHHHhhhcCC---CCCceEEecCccc
Q 023689          221 QEYHWLGAVPVKDVAKAQVLLFESP---AASGRYLCTNGIY  258 (278)
Q Consensus       221 ~~~~~~~~i~~~D~a~~~~~~~~~~---~~~~~~~~~~~~~  258 (278)
                      .|  ...+..++|+|+++++++..+   .-.|+.+..++.+
T Consensus       220 iP--lgR~g~pediA~~v~fL~S~d~s~~itG~~i~vDGG~  258 (274)
T d1xhla_         220 IP--VGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGS  258 (274)
T ss_dssp             CT--TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTG
T ss_pred             CC--CCCCcCHHHHHHHHHHHcCCccccCccCcEEEeCcCH
Confidence            11  345678999999999998532   2467655444433

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.9e-26  Score=181.74  Aligned_cols=201  Identities=14%  Similarity=0.058  Sum_probs=152.0

Q ss_pred             cccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCCCCCCceEEEEccCCChhhHHHHhc----
Q 023689            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE----   79 (278)
Q Consensus         5 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~----   79 (278)
                      +++.||++|||||+++||++++++|.++|+ +|++.+|+.++.+.+.. +...+ .++..+.+|++|+++++++++    
T Consensus         3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~-~V~l~~r~~~~l~~~~~~~~~~~-~~~~~~~~Dvs~~~~v~~~~~~i~~   80 (244)
T d1yb1a_           3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLG-AKVHTFVVDCSNREDIYSSAKKVKA   80 (244)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcC-CcEEEEEeeCCCHHHHHHHHHHHHH
Confidence            467899999999999999999999999999 89999998765443322 22222 278999999999999888775    


Q ss_pred             ---CccEEEEecccCCCCCC----CCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccC
Q 023689           80 ---GCKGVFHVASPCTLEDP----VDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (278)
Q Consensus        80 ---~~d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E  148 (278)
                         .+|++|||||.......    .+.++..+++|+.|+.++.+++    ++++.+++|++||..+..+.++        
T Consensus        81 ~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~~--------  152 (244)
T d1yb1a_          81 EIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPF--------  152 (244)
T ss_dssp             HTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHH--------
T ss_pred             HcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCCC--------
Confidence               57999999997665322    2356889999998888777655    5667789999999887655332        


Q ss_pred             CCCCchhhhhccCchhhhHHHHHHHHHHHHHHh------cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccc
Q 023689          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK------HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQE  222 (278)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~------~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (278)
                             +     ..|+.||.+...+.+.++.+      .|++++++.||.|-++.....       ..           
T Consensus       153 -------~-----~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~-------~~-----------  202 (244)
T d1yb1a_         153 -------L-----LAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP-------ST-----------  202 (244)
T ss_dssp             -------H-----HHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT-------HH-----------
T ss_pred             -------c-----HHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCc-------Cc-----------
Confidence                   1     56888888888888777754      479999999999988754321       00           


Q ss_pred             ccccCcccHHHHHHHHHhhhcCCC
Q 023689          223 YHWLGAVPVKDVAKAQVLLFESPA  246 (278)
Q Consensus       223 ~~~~~~i~~~D~a~~~~~~~~~~~  246 (278)
                       .....+.++|+|+.++..+....
T Consensus       203 -~~~~~~~pe~va~~i~~~~~~~~  225 (244)
T d1yb1a_         203 -SLGPTLEPEEVVNRLMHGILTEQ  225 (244)
T ss_dssp             -HHCCCCCHHHHHHHHHHHHHTTC
T ss_pred             -cccCCCCHHHHHHHHHHHHhcCC
Confidence             12234678999999998877643

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2e-25  Score=178.48  Aligned_cols=223  Identities=15%  Similarity=0.111  Sum_probs=155.0

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCC-CCCceEEEEccCCChhhHHHHhc------
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGA-GDANLRVFEADVLDSGAVSRAVE------   79 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~-~~~~v~~~~~Dl~d~~~~~~~~~------   79 (278)
                      +||++|||||+++||+++++.|.++|+ .|++..|+.+..+... .+... ...++.++.+|++|+++++++++      
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   80 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            589999999999999999999999999 8988888765433222 22111 12278999999999999888875      


Q ss_pred             -CccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHH----HhcC---CCEEEEecceeeeecCCCCCCccccCCCC
Q 023689           80 -GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAA----KRFG---VRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (278)
Q Consensus        80 -~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~---~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~  151 (278)
                       ++|++||+|+....    ++|+..+++|+.++.++.+++    ++++   .+++|++||.++..+.++.          
T Consensus        81 G~iDilVnnAg~~~~----~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~~----------  146 (254)
T d2gdza1          81 GRLDILVNNAGVNNE----KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQ----------  146 (254)
T ss_dssp             SCCCEEEECCCCCCS----SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTC----------
T ss_pred             CCcCeeccccccccc----ccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCCc----------
Confidence             57999999998653    678999999988777666555    3332   3579999998887665543          


Q ss_pred             CchhhhhccCchhhhHHHHHHHHHHH--HH---HhcCCceEEEecceeeCCCCCCCCch-----hHHHHHHHhhCCCCcc
Q 023689          152 TDLEYCKSRKKWYPVSKTLAEKAAWE--FA---EKHGVDVVAIHPATCLGPLMQPYLNA-----SCAVLQQLLQGSKDTQ  221 (278)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~--~~---~~~~~~~~~lrp~~i~g~~~~~~~~~-----~~~~~~~~~~~~~~~~  221 (278)
                                ..|+.+|...+.+.+.  ++   .++||++++|.||.|-++........     .......+....    
T Consensus       147 ----------~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~----  212 (254)
T d2gdza1         147 ----------PVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMI----  212 (254)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHH----
T ss_pred             ----------cchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcC----
Confidence                      4688888887776654  22   25699999999999987643221000     000001111100    


Q ss_pred             cccccCcccHHHHHHHHHhhhcCCCCCceEE--ecCccccHH
Q 023689          222 EYHWLGAVPVKDVAKAQVLLFESPAASGRYL--CTNGIYQFG  261 (278)
Q Consensus       222 ~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~--~~~~~~s~~  261 (278)
                        ....+..++|+|+++++++.+..-.|..+  -++..+.++
T Consensus       213 --p~~r~~~pedvA~~v~fL~s~~~itG~~i~VdGG~~~~~~  252 (254)
T d2gdza1         213 --KYYGILDPPLIANGLITLIEDDALNGAIMKITTSKGIHFQ  252 (254)
T ss_dssp             --HHHCCBCHHHHHHHHHHHHHCTTCSSCEEEEETTTEEEEC
T ss_pred             --CCCCCcCHHHHHHHHHHHHcCCCCCCCEEEECCCCeeecc
Confidence              12346789999999999998776677543  334455444

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.92  E-value=4e-25  Score=178.79  Aligned_cols=224  Identities=18%  Similarity=0.128  Sum_probs=156.4

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc------
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~------   79 (278)
                      ++++|++|||||+++||++++++|.++|+ +|++..|+.+..+.+..-.  + .++..+.+|++++++++++++      
T Consensus         2 ~L~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~~--~-~~~~~~~~Dv~~~~~~~~~~~~~~~~~   77 (276)
T d1bdba_           2 KLKGEAVLITGGASGLGRALVDRFVAEGA-KVAVLDKSAERLAELETDH--G-DNVLGIVGDVRSLEDQKQAASRCVARF   77 (276)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH--G-GGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHc--C-CCeeEEecccccHHHHHHHHHHHHHHh
Confidence            58899999999999999999999999999 8888888765443332111  1 178999999999998888765      


Q ss_pred             -CccEEEEecccCCCCC-----CC----CchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCcc
Q 023689           80 -GCKGVFHVASPCTLED-----PV----DPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKV  145 (278)
Q Consensus        80 -~~d~vi~~a~~~~~~~-----~~----~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~  145 (278)
                       .+|++||+||......     ..    +.|+..+++|+.++..+.+++    ++++ +++|++||..+..+.++.    
T Consensus        78 g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~~~~~~~~~~----  152 (276)
T d1bdba_          78 GKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-GNVIFTISNAGFYPNGGG----  152 (276)
T ss_dssp             SCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSTTSSC----
T ss_pred             CCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-CCceeeeechhccCCCCC----
Confidence             5799999998654311     11    237888999998888777666    4444 689999987776554442    


Q ss_pred             ccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHhc--CCceEEEecceeeCCCCCCCCc-------hhHHHHHHHhhC
Q 023689          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQPYLN-------ASCAVLQQLLQG  216 (278)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~~~~~~lrp~~i~g~~~~~~~~-------~~~~~~~~~~~~  216 (278)
                                      ..|+.+|...+.+.+.++.+.  ++++++|.||.|-++.......       ............
T Consensus       153 ----------------~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (276)
T d1bdba_         153 ----------------PLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSV  216 (276)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTT
T ss_pred             ----------------chHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhc
Confidence                            457777777777766666543  5999999999998875433210       011112222222


Q ss_pred             CCCcccccccCcccHHHHHHHHHhhhcCC---CCCceEEecCccccH
Q 023689          217 SKDTQEYHWLGAVPVKDVAKAQVLLFESP---AASGRYLCTNGIYQF  260 (278)
Q Consensus       217 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~---~~~~~~~~~~~~~s~  260 (278)
                      .|      ...+..++|+|+++++++..+   .-.|..+..++.+++
T Consensus       217 ~P------lgR~g~peeva~~v~fL~S~~~a~~itG~~i~VDGG~~~  257 (276)
T d1bdba_         217 LP------IGRMPEVEEYTGAYVFFATRGDAAPATGALLNYDGGLGV  257 (276)
T ss_dssp             CT------TSSCCCGGGGSHHHHHHHCHHHHTTCSSCEEEESSSGGG
T ss_pred             CC------CCCCcCHHHHHHHHHHHcCCcccCCeeCcEEEECcChhh
Confidence            22      345678999999999887532   346766555555554

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.92  E-value=3.5e-25  Score=177.67  Aligned_cols=221  Identities=18%  Similarity=0.138  Sum_probs=153.7

Q ss_pred             cccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecC-CCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc----
Q 023689            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFP-GSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (278)
Q Consensus         5 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~-~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~----   79 (278)
                      +.++||++|||||+++||+++++.|+++|+ +|++..++ .+..+...........++..+.+|++|++++.++++    
T Consensus         2 ~~L~GK~alITGas~GIG~aia~~la~~G~-~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~   80 (259)
T d1ja9a_           2 KPLAGKVALTTGAGRGIGRGIAIELGRRGA-SVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVS   80 (259)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHH
Confidence            358899999999999999999999999999 77665443 332333222111112278999999999998888775    


Q ss_pred             ---CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHHHhc--CCCEEEEecceeeee-cCCCCCCccccCC
Q 023689           80 ---GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIV-PNPGWKGKVFDET  149 (278)
Q Consensus        80 ---~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~Ss~~~~~-~~~~~~~~~~~E~  149 (278)
                         ++|++||+||.....    ...+.|+..+++|+.+...+++++.++  .-+++++++|..+.. +.+..        
T Consensus        81 ~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~~~~~~--------  152 (259)
T d1ja9a_          81 HFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPNH--------  152 (259)
T ss_dssp             HHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCCSC--------
T ss_pred             HcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccccCCCCc--------
Confidence               579999999976552    234577899999999998888888553  224566666544432 22221        


Q ss_pred             CCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCC---------CCC-chhHHHHHHHhhC
Q 023689          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQ---------PYL-NASCAVLQQLLQG  216 (278)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~---------~~~-~~~~~~~~~~~~~  216 (278)
                                  ..|+.+|...+.+.+.++++   +|+++++|.||.+-++...         ... .....+.......
T Consensus       153 ------------~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (259)
T d1ja9a_         153 ------------ALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANM  220 (259)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHT
T ss_pred             ------------hhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhC
Confidence                        46888888888887777764   5899999999999875311         111 1123333444444


Q ss_pred             CCCcccccccCcccHHHHHHHHHhhhcCCC--CCceEE
Q 023689          217 SKDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYL  252 (278)
Q Consensus       217 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~  252 (278)
                      .|      ...+..++|+|+++++++....  -.|..+
T Consensus       221 ~p------l~R~g~p~eVa~~v~fL~S~~a~~itG~~i  252 (259)
T d1ja9a_         221 NP------LKRIGYPADIGRAVSALCQEESEWINGQVI  252 (259)
T ss_dssp             ST------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             CC------CCCCcCHHHHHHHHHHHhCchhcCCcCceE
Confidence            44      3567899999999999987644  356543

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.92  E-value=3.3e-25  Score=177.03  Aligned_cols=216  Identities=12%  Similarity=0.063  Sum_probs=155.7

Q ss_pred             eEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc-------CccE
Q 023689           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GCKG   83 (278)
Q Consensus        11 ~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   83 (278)
                      ++|||||+++||+.+++.|.++|+ +|++..|+.+..+.++..      ...+..+|++|.++++++++       ++|+
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga-~V~i~~r~~~~~~~~~~~------~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDi   74 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGH-TVACHDESFKQKDELEAF------AETYPQLKPMSEQEPAELIEAVTSAYGQVDV   74 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHH------HHHCTTSEECCCCSHHHHHHHHHHHHSCCCE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhh------hCcEEEeccCCHHHHHHHHHHHHHHcCCCCE
Confidence            689999999999999999999999 898888876665544432      22345689999877777664       6899


Q ss_pred             EEEecccCCC-----CCCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccCCCCCch
Q 023689           84 VFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDL  154 (278)
Q Consensus        84 vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~  154 (278)
                      +|||||....     +...++|+..+++|+.++..+.+++    ++++-+++|++||.++..+.++.             
T Consensus        75 LVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~~-------------  141 (252)
T d1zmta1          75 LVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKEL-------------  141 (252)
T ss_dssp             EEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTC-------------
T ss_pred             EEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccccc-------------
Confidence            9999986432     1233568889999988888777765    55566899999998876655442             


Q ss_pred             hhhhccCchhhhHHHHHHHHHHHHHH---hcCCceEEEecceeeCCCCCCCCc-----hhHHHHHHHhhCCCCccccccc
Q 023689          155 EYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLN-----ASCAVLQQLLQGSKDTQEYHWL  226 (278)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lrp~~i~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~  226 (278)
                             ..|+.+|...+.+.+.++.   ++||++++|.||.|.++.......     ........+....|      ..
T Consensus       142 -------~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~p------l~  208 (252)
T d1zmta1         142 -------STYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTA------LQ  208 (252)
T ss_dssp             -------HHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSS------SS
T ss_pred             -------cccccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCC------CC
Confidence                   4577777777777776665   458999999999999886544321     11233333333333      34


Q ss_pred             CcccHHHHHHHHHhhhcCCC--CCceEEecCcccc
Q 023689          227 GAVPVKDVAKAQVLLFESPA--ASGRYLCTNGIYQ  259 (278)
Q Consensus       227 ~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~~~~s  259 (278)
                      .+..++|+|+++++++....  -.|+.+..++.++
T Consensus       209 R~g~pedvA~~v~fL~S~~s~~iTG~~i~vdGG~~  243 (252)
T d1zmta1         209 RLGTQKELGELVAFLASGSCDYLTGQVFWLAGGFP  243 (252)
T ss_dssp             SCBCHHHHHHHHHHHHTTSCGGGTTCEEEESTTCC
T ss_pred             CCcCHHHHHHHHHHHhCchhcCCcCCeEEECCCce
Confidence            57899999999999986543  3576666666555

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.92  E-value=1.3e-24  Score=177.81  Aligned_cols=223  Identities=13%  Similarity=0.023  Sum_probs=153.8

Q ss_pred             cccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc----
Q 023689            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (278)
Q Consensus         5 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~----   79 (278)
                      .++++|++|||||+|+||++++++|.++|+ +|++..|+.++.+... ++.......+..+.+|++|.++++++++    
T Consensus        21 ~~l~gK~alITGas~GIG~aiA~~la~~Ga-~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~   99 (294)
T d1w6ua_          21 NSFQGKVAFITGGGTGLGKGMTTLLSSLGA-QCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIK   99 (294)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhh
Confidence            478899999999999999999999999999 8988988765432221 2211112278899999999998887764    


Q ss_pred             ---CccEEEEecccCCCCC----CCCchhhhhhhHHhHHHHHHHHH----H-hcCCCEEEEecceeeeecCCCCCCcccc
Q 023689           80 ---GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAA----K-RFGVRRVVVTSSISAIVPNPGWKGKVFD  147 (278)
Q Consensus        80 ---~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~----~-~~~~~~~v~~Ss~~~~~~~~~~~~~~~~  147 (278)
                         ++|++||+||......    ...++...+.+|..+...+...+    . ..+.+.++.+||..+..+.++.      
T Consensus       100 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~~------  173 (294)
T d1w6ua_         100 VAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFV------  173 (294)
T ss_dssp             HTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTC------
T ss_pred             hccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhccccc------
Confidence               6899999999765422    22356777888887777665544    2 2345567777776665544432      


Q ss_pred             CCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccc
Q 023689          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (278)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (278)
                                    ..|+.+|...+.+.+.++.+   +||++++|.||.|.++....................|      
T Consensus       174 --------------~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~p------  233 (294)
T d1w6ua_         174 --------------VPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIP------  233 (294)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCT------
T ss_pred             --------------chHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCC------
Confidence                          46888888888888777754   5899999999999988654332222233444444444      


Q ss_pred             ccCcccHHHHHHHHHhhhcCCC--CCceEEec
Q 023689          225 WLGAVPVKDVAKAQVLLFESPA--ASGRYLCT  254 (278)
Q Consensus       225 ~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~~  254 (278)
                      ...+..++|+|+++.+++....  -.|..+..
T Consensus       234 l~R~~~pediA~~v~fL~sd~s~~itG~~i~v  265 (294)
T d1w6ua_         234 CGRLGTVEELANLAAFLCSDYASWINGAVIKF  265 (294)
T ss_dssp             TSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEE
T ss_pred             CCCCCCHHHHHHHHHHHhCchhcCCCCcEEEE
Confidence            3457789999999999986543  35755433

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=2.2e-24  Score=175.10  Aligned_cols=225  Identities=24%  Similarity=0.216  Sum_probs=151.1

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEE---ecCCCCCccc----ccCCCCCCCceEEEEccCCChhhHHHHhc---
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINAT---VFPGSDSSHL----FALPGAGDANLRVFEADVLDSGAVSRAVE---   79 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~---~r~~~~~~~~----~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---   79 (278)
                      |.||||||+++||++++++|.++|+ .|+.+   .|+.+....+    ..+..... ++..+.+|++|++++.++++   
T Consensus         3 kVvlITGassGIG~a~A~~la~~Ga-~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~Dv~~~~~~~~~~~~~~   80 (285)
T d1jtva_           3 TVVLITGCSSGIGLHLAVRLASDPS-QSFKVYATLRDLKTQGRLWEAARALACPPG-SLETLQLDVRDSKSVAAARERVT   80 (285)
T ss_dssp             EEEEESCCSSHHHHHHHHHHHTCTT-CCEEEEEEESCGGGTHHHHHHHHHTTCCTT-SEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CEEEEccCCCHHHHHHHHHHHHCCC-CeEEEEEecCChhhhHHHHHHHHHHhccCC-ceEEEeccccchHhhhhhhhhcc
Confidence            5789999999999999999999998 44333   3333322222    12222222 89999999999999998875   


Q ss_pred             --CccEEEEecccCCCC----CCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCccccCC
Q 023689           80 --GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (278)
Q Consensus        80 --~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~  149 (278)
                        .+|+++|+|+.....    ...+.|+..+++|+.|+.++.+++    ++++-+++|++||.++..+.+..        
T Consensus        81 ~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~~~--------  152 (285)
T d1jtva_          81 EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFN--------  152 (285)
T ss_dssp             TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTC--------
T ss_pred             ccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCCCc--------
Confidence              479999999876552    234577899999998887776655    66677899999998887766553        


Q ss_pred             CCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHH--------HHHhhCCC
Q 023689          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVL--------QQLLQGSK  218 (278)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~--------~~~~~~~~  218 (278)
                                  ..|+.+|...+.+.+.++.+   +|++++++.||.|-++.............        .+......
T Consensus       153 ------------~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (285)
T d1jtva_         153 ------------DVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLA  220 (285)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHH
T ss_pred             ------------hHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHH
Confidence                        56888888888877777754   59999999999999876543321111110        00000000


Q ss_pred             CcccccccCcccHHHHHHHHHhhhcCCCCCceEEecCc
Q 023689          219 DTQEYHWLGAVPVKDVAKAQVLLFESPAASGRYLCTNG  256 (278)
Q Consensus       219 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~  256 (278)
                      ............++|+|++++.++.++.+.-+|+.+..
T Consensus       221 ~~~~~~~~~~~~PeeVA~~v~~~~~~~~p~~ry~~g~~  258 (285)
T d1jtva_         221 HSKQVFREAAQNPEEVAEVFLTALRAPKPTLRYFTTER  258 (285)
T ss_dssp             HHHHHHHHHCBCHHHHHHHHHHHHHCSSCCSEEESCST
T ss_pred             HHhhhhcccCCCHHHHHHHHHHHHhCCCCCeEEecHHH
Confidence            00000112356899999999999988765556766543

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.91  E-value=5.5e-24  Score=178.34  Aligned_cols=225  Identities=16%  Similarity=0.083  Sum_probs=158.1

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChh-hHHHHhcCccEEEEe
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSG-AVSRAVEGCKGVFHV   87 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~-~~~~~~~~~d~vi~~   87 (278)
                      .|+|||||||||||++|+++|+++|+ .|++++|+........ +.  ...+++++++|++|.. .+..+++++|.++++
T Consensus         3 kktIlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~~~~~~-~~--~~~~v~~~~gD~~d~~~~~~~a~~~~~~~~~~   78 (350)
T d1xgka_           3 KKTIAVVGATGRQGASLIRVAAAVGH-HVRAQVHSLKGLIAEE-LQ--AIPNVTLFQGPLLNNVPLMDTLFEGAHLAFIN   78 (350)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCSCSHHHHH-HH--TSTTEEEEESCCTTCHHHHHHHHTTCSEEEEC
T ss_pred             CCEEEEECCChHHHHHHHHHHHhCCC-eEEEEECCcchhhhhh-hc--ccCCCEEEEeeCCCcHHHHHHHhcCCceEEee
Confidence            48999999999999999999999999 8999999876543211 11  1118999999999965 467788899998877


Q ss_pred             cccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhhH
Q 023689           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVS  167 (278)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~s  167 (278)
                      ...            ....|+..+.+++++|++.+++++++.||.........                  .....|..+
T Consensus        79 ~~~------------~~~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~~~~------------------~~~~~~~~~  128 (350)
T d1xgka_          79 TTS------------QAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGP------------------WPAVPMWAP  128 (350)
T ss_dssp             CCS------------TTSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTSS------------------CCCCTTTHH
T ss_pred             ccc------------ccchhhhhhhHHHHHHHHhCCCceEEEeeccccccCCc------------------ccchhhhhh
Confidence            432            12245677889999999999888998888554332211                  111457778


Q ss_pred             HHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCC----CCcccccccCcccH-HHHHHHHHhhh
Q 023689          168 KTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGS----KDTQEYHWLGAVPV-KDVAKAQVLLF  242 (278)
Q Consensus       168 K~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~-~D~a~~~~~~~  242 (278)
                      |...+....    +.+++++++||+.++++...........  .....+.    .+..++..++++++ +|+++++..++
T Consensus       129 k~~~~~~~~----~~~~~~~~vr~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l  202 (350)
T d1xgka_         129 KFTVENYVR----QLGLPSTFVYAGIYNNNFTSLPYPLFQM--ELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIF  202 (350)
T ss_dssp             HHHHHHHHH----TSSSCEEEEEECEEGGGCBSSSCSSCBE--EECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHH
T ss_pred             HHHHHHHHH----hhccCceeeeeceeeccccccccccccc--cccccccceeeecccCCCcceEEEeHHHHHHHHHHHH
Confidence            888887664    6789999999999887653322111000  0001111    11124466777876 79999999998


Q ss_pred             cCCC--CCc-eEEecCccccHHHHHHHHHHhCCC
Q 023689          243 ESPA--ASG-RYLCTNGIYQFGDFAERVSKLFPE  273 (278)
Q Consensus       243 ~~~~--~~~-~~~~~~~~~s~~e~~~~i~~~~~~  273 (278)
                      ....  ..| +|+++++.+|+.|+++.+.+.+++
T Consensus       203 ~~~~~~~~G~~~~~~g~~~T~~eia~~l~~~~G~  236 (350)
T d1xgka_         203 KDGPQKWNGHRIALTFETLSPVQVCAAFSRALNR  236 (350)
T ss_dssp             HHCHHHHTTCEEEECSEEECHHHHHHHHHHHHTS
T ss_pred             hCChhhcCCeEEEEeCCcCCHHHHHHHHHHHHCC
Confidence            7543  234 677888889999999999998754

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.90  E-value=2.1e-23  Score=168.43  Aligned_cols=224  Identities=17%  Similarity=0.130  Sum_probs=154.9

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCC-Ccccc-cCCCCCCCceEEEEccCCChhhHHHHhc----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~-~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~----   79 (278)
                      .+++|++|||||+++||+++++.|+++|+ +|++..|+.+. .+... .+.... .++.++++|++|++++.+.++    
T Consensus        15 sL~gK~~lITGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~~~~~~g-~~~~~~~~D~~~~~~v~~~~~~~~~   92 (272)
T d1g0oa_          15 SLEGKVALVTGAGRGIGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKNG-SDAACVKANVGVVEDIVRMFEEAVK   92 (272)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCchHHHHHHHHHHHhhC-CceeeEeCCCCCHHHHHHHHHHHHH
Confidence            57899999999999999999999999999 78777765432 22221 111112 278999999999998888875    


Q ss_pred             ---CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHHHhc--CCCEEEEecceeeeecCCCCCCccccCCC
Q 023689           80 ---GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (278)
Q Consensus        80 ---~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~  150 (278)
                         ++|+++|+++....    +...+.++..+++|+.++..+.+++.+.  .-+++++++|..+......          
T Consensus        93 ~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~~~~----------  162 (272)
T d1g0oa_          93 IFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVP----------  162 (272)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCS----------
T ss_pred             HhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccccccccccccccccccc----------
Confidence               57999999987654    2334567888999999999999988653  2357777777554322111          


Q ss_pred             CCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCC--------C-CchhHHHHH-HHhhCC
Q 023689          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQP--------Y-LNASCAVLQ-QLLQGS  217 (278)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~--------~-~~~~~~~~~-~~~~~~  217 (278)
                               ....|+.+|...+.+.+.++.+   +||++++|.||.+-++....        . ......... ......
T Consensus       163 ---------~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (272)
T d1g0oa_         163 ---------KHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWS  233 (272)
T ss_dssp             ---------SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSC
T ss_pred             ---------chhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccC
Confidence                     1146899999888888877764   59999999999998763110        0 001111111 222333


Q ss_pred             CCcccccccCcccHHHHHHHHHhhhcCCC--CCceEEecCc
Q 023689          218 KDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLCTNG  256 (278)
Q Consensus       218 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~~  256 (278)
                      |      ...+..++|+|.++++++....  -.|..+..++
T Consensus       234 P------lgR~~~peevA~~v~fL~s~~s~~itG~~i~vDG  268 (272)
T d1g0oa_         234 P------LRRVGLPIDIARVVCFLASNDGGWVTGKVIGIDG  268 (272)
T ss_dssp             T------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             C------CCCCcCHHHHHHHHHHHhCchhcCccCceEeECC
Confidence            3      3457899999999999986543  3576554443

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.90  E-value=3.8e-23  Score=164.79  Aligned_cols=174  Identities=19%  Similarity=0.184  Sum_probs=129.5

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHH---CCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLD---NNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~---~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      .||+||||||+++||++++++|++   +|+ .|++..|+.+..+.++.+..... ++.++.+|++|+++++++++     
T Consensus         1 ~MKtilITGas~GIG~a~a~~l~~~a~~g~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dvs~~~~v~~~~~~i~~~   78 (248)
T d1snya_           1 HMNSILITGCNRGLGLGLVKALLNLPQPPQ-HLFTTCRNREQAKELEDLAKNHS-NIHILEIDLRNFDAYDKLVADIEGV   78 (248)
T ss_dssp             CCSEEEESCCSSHHHHHHHHHHHTSSSCCS-EEEEEESCTTSCHHHHHHHHHCT-TEEEEECCTTCGGGHHHHHHHHHHH
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHhcCC-cEEEEEEEeccHHHHHHHHhhhHHH
Confidence            378999999999999999999974   688 89999998877665544322222 89999999999988887654     


Q ss_pred             ----CccEEEEecccCCCC-----CCCCchhhhhhhHHhHHHHHHHHH----Hhc-----------CCCEEEEecceeee
Q 023689           80 ----GCKGVFHVASPCTLE-----DPVDPEKELILPAVQGTLNVLEAA----KRF-----------GVRRVVVTSSISAI  135 (278)
Q Consensus        80 ----~~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~ll~~~----~~~-----------~~~~~v~~Ss~~~~  135 (278)
                          ++|++|||||.....     ...+.++..+++|+.|+..+.+++    ++.           +.+++|++||..+.
T Consensus        79 ~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~  158 (248)
T d1snya_          79 TKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGS  158 (248)
T ss_dssp             HGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGC
T ss_pred             hhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccc
Confidence                479999999975442     122346789999999988877765    221           34689999997654


Q ss_pred             ecCCCCCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCC
Q 023689          136 VPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQ  200 (278)
Q Consensus       136 ~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~  200 (278)
                      ......                 .....|+.||.+...+.+.++.+   +|++++++.||.|-++...
T Consensus       159 ~~~~~~-----------------~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~~  209 (248)
T d1snya_         159 IQGNTD-----------------GGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGG  209 (248)
T ss_dssp             STTCCS-----------------CCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTC
T ss_pred             cCCCCC-----------------CChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCccc
Confidence            321110                 01136888888888877777654   4899999999999888643

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=6e-23  Score=163.69  Aligned_cols=212  Identities=18%  Similarity=0.134  Sum_probs=151.7

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      .++||++|||||+++||++++++|.++|+ +|++..|+.+..+...+ +.    .+......|+.+.+.+++...     
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~----~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGA-SAVLLDLPNSGGEAQAKKLG----NNCVFAPADVTSEKDVQTALALAKGK   76 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSSHHHHHHHHC----TTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhC----CCcccccccccccccccccccccccc
Confidence            57899999999999999999999999999 89889888766544332 21    178889999999877666553     


Q ss_pred             --CccEEEEecccCCCC----------CCCCchhhhhhhHHhHHHHHHHHHHhc----------CCCEEEEecceeeeec
Q 023689           80 --GCKGVFHVASPCTLE----------DPVDPEKELILPAVQGTLNVLEAAKRF----------GVRRVVVTSSISAIVP  137 (278)
Q Consensus        80 --~~d~vi~~a~~~~~~----------~~~~~~~~~~~~n~~~~~~ll~~~~~~----------~~~~~v~~Ss~~~~~~  137 (278)
                        ..|.++++++.....          ...+.|+..+++|+.++.++.+++.++          +.+++|++||..+..+
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~  156 (248)
T d2o23a1          77 FGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEG  156 (248)
T ss_dssp             HSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC
T ss_pred             cccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccC
Confidence              468888887643321          122467888999999999988887432          3457999999888766


Q ss_pred             CCCCCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHh
Q 023689          138 NPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLL  214 (278)
Q Consensus       138 ~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~  214 (278)
                      .++.                    ..|+.+|...+.+.+.++.+   +|+++++|.||.+.++......   ........
T Consensus       157 ~~~~--------------------~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~---~~~~~~~~  213 (248)
T d2o23a1         157 QVGQ--------------------AAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLP---EKVCNFLA  213 (248)
T ss_dssp             CTTC--------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-------------CHHH
T ss_pred             CCCc--------------------hHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCC---HHHHHHHH
Confidence            5543                    56899998888888888764   4899999999999888644321   12222222


Q ss_pred             hCCCCcccccccCcccHHHHHHHHHhhhcCCCCCce
Q 023689          215 QGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGR  250 (278)
Q Consensus       215 ~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~  250 (278)
                      ...|.     ...+..++|+|+++++++++..-.|+
T Consensus       214 ~~~pl-----~~R~g~peevA~~v~fL~s~~~itGq  244 (248)
T d2o23a1         214 SQVPF-----PSRLGDPAEYAHLVQAIIENPFLNGE  244 (248)
T ss_dssp             HTCSS-----SCSCBCHHHHHHHHHHHHHCTTCCSC
T ss_pred             hcCCC-----CCCCcCHHHHHHHHHHHHhCCCCCce
Confidence            32221     13467899999999999876544453

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.90  E-value=6.3e-24  Score=173.36  Aligned_cols=199  Identities=17%  Similarity=0.050  Sum_probs=142.2

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccc------ccCCCCCCCceEEEEccCCChhhHHHHhc
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL------FALPGAGDANLRVFEADVLDSGAVSRAVE   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~------~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~   79 (278)
                      ++++|++|||||+++||+++++.|.++|+ .|++.+++.+.....      .+.............+|++|.++++++++
T Consensus         4 ~l~gKvalITGas~GIG~aiA~~la~~Ga-~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~   82 (302)
T d1gz6a_           4 RFDGRVVLVTGAGGGLGRAYALAFAERGA-LVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVK   82 (302)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHH
T ss_pred             CcCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHH
Confidence            68899999999999999999999999999 888887754432111      10000000023456688888877666654


Q ss_pred             -------CccEEEEecccCCC----CCCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCc
Q 023689           80 -------GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGK  144 (278)
Q Consensus        80 -------~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~  144 (278)
                             ++|++|||||....    +...++|+..+++|+.++..+.+++    ++++-+++|++||.++..+.++.   
T Consensus        83 ~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~~~---  159 (302)
T d1gz6a_          83 TALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQ---  159 (302)
T ss_dssp             HHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTC---
T ss_pred             HHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCCCc---
Confidence                   68999999997655    2234578999999999888877765    55667899999999988776653   


Q ss_pred             cccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcc
Q 023689          145 VFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ  221 (278)
Q Consensus       145 ~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~  221 (278)
                                       ..|+.+|...+.+.+.++.+   +||++++|.||.+-++.....   ...             
T Consensus       160 -----------------~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~---~~~-------------  206 (302)
T d1gz6a_         160 -----------------ANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVM---PED-------------  206 (302)
T ss_dssp             -----------------HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGS---CHH-------------
T ss_pred             -----------------HHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcC---cHh-------------
Confidence                             46777777777777777654   599999999997754432211   111             


Q ss_pred             cccccCcccHHHHHHHHHhhhcC
Q 023689          222 EYHWLGAVPVKDVAKAQVLLFES  244 (278)
Q Consensus       222 ~~~~~~~i~~~D~a~~~~~~~~~  244 (278)
                         ...++.++|+|.+++++...
T Consensus       207 ---~~~~~~PedvA~~v~fL~S~  226 (302)
T d1gz6a_         207 ---LVEALKPEYVAPLVLWLCHE  226 (302)
T ss_dssp             ---HHHHSCGGGTHHHHHHHTST
T ss_pred             ---hHhcCCHHHHHHHHHHHcCC
Confidence               12345679999999998753

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.89  E-value=8.7e-24  Score=169.58  Aligned_cols=213  Identities=16%  Similarity=0.092  Sum_probs=151.9

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHH---CCCCeEEEEecCCCCCccccc-CCCC-CCCceEEEEccCCChhhHHHHhc-
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLD---NNYTSINATVFPGSDSSHLFA-LPGA-GDANLRVFEADVLDSGAVSRAVE-   79 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~---~g~~~v~~~~r~~~~~~~~~~-~~~~-~~~~v~~~~~Dl~d~~~~~~~~~-   79 (278)
                      .+++|+++|||||++||++++++|.+   +|+ .|++..|+.+..+.+.. +... .+.++.++.+|++|+++++++++ 
T Consensus         3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~   81 (259)
T d1oaaa_           3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA   81 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCC-EEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHH
Confidence            46789999999999999999999975   799 88888887765444321 1111 12278999999999998888763 


Q ss_pred             ----------CccEEEEecccCCC-------CCCCCchhhhhhhHHhHHHHHHHHHHhc----C--CCEEEEecceeeee
Q 023689           80 ----------GCKGVFHVASPCTL-------EDPVDPEKELILPAVQGTLNVLEAAKRF----G--VRRVVVTSSISAIV  136 (278)
Q Consensus        80 ----------~~d~vi~~a~~~~~-------~~~~~~~~~~~~~n~~~~~~ll~~~~~~----~--~~~~v~~Ss~~~~~  136 (278)
                                ..|+++|+||....       +...+.|+..+++|+.++..+.+++.++    +  .+++|++||..+..
T Consensus        82 ~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~  161 (259)
T d1oaaa_          82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ  161 (259)
T ss_dssp             HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS
T ss_pred             HHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccC
Confidence                      35799999986432       1222467889999999999999988543    2  35799999988876


Q ss_pred             cCCCCCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh-cCCceEEEecceeeCCCCCCCC--chhHHHHHHH
Q 023689          137 PNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK-HGVDVVAIHPATCLGPLMQPYL--NASCAVLQQL  213 (278)
Q Consensus       137 ~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-~~~~~~~lrp~~i~g~~~~~~~--~~~~~~~~~~  213 (278)
                      +.++.                    ..|+.+|...+.+.+.++.+ +|++++++.||.|.++......  .........+
T Consensus       162 ~~~~~--------------------~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~  221 (259)
T d1oaaa_         162 PYKGW--------------------GLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKL  221 (259)
T ss_dssp             CCTTC--------------------HHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHH
T ss_pred             CCccc--------------------hHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHH
Confidence            65543                    57999999999888888865 4999999999999887422110  0001111111


Q ss_pred             hhCCCCcccccccCcccHHHHHHHHHhhhcCC
Q 023689          214 LQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP  245 (278)
Q Consensus       214 ~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  245 (278)
                      ....      ....+..++|+|+++++++.+.
T Consensus       222 ~~~~------~~~r~~~p~evA~~i~~ll~~~  247 (259)
T d1oaaa_         222 QKLK------SDGALVDCGTSAQKLLGLLQKD  247 (259)
T ss_dssp             HHHH------HTTCSBCHHHHHHHHHHHHHHC
T ss_pred             HhcC------CCCCCCCHHHHHHHHHHHhhhc
Confidence            1111      1234578999999999998653

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.89  E-value=1.6e-22  Score=162.28  Aligned_cols=206  Identities=20%  Similarity=0.197  Sum_probs=151.2

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc----cCCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF----ALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~----~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      ++++|||||+|+||++++++|.++|+.+|++..|+..+.+...    .+...+ .++.++.+|++|++++.++++     
T Consensus         9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g-~~v~~~~~Dv~d~~~~~~~~~~i~~~   87 (259)
T d2fr1a1           9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALG-ARTTVAACDVTDRESVRELLGGIGDD   87 (259)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTT-CEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred             cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhcc-ccccccccccchHHHHHHhhcccccc
Confidence            4699999999999999999999999855777777643332222    222222 279999999999999998876     


Q ss_pred             -CccEEEEecccCCCCC----CCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecceeeeecCCCCCCccccCCCCCch
Q 023689           80 -GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDL  154 (278)
Q Consensus        80 -~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~  154 (278)
                       .+|.|+|+++......    ..+.++..+++|+.++.++.++++..+.+++|++||+++..+.++.             
T Consensus        88 ~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~g~~~~-------------  154 (259)
T d2fr1a1          88 VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPGL-------------  154 (259)
T ss_dssp             SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTTC-------------
T ss_pred             ccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhccCCccc-------------
Confidence             3699999999766522    2345677899999999999999988888899999999998776653             


Q ss_pred             hhhhccCchhhhHHHHHHHHHHHHHHhcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHHHH
Q 023689          155 EYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDV  234 (278)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  234 (278)
                             ..|+.+|...+.+.+.++ ..|+++++|.||.+.++.....      .......       ......+.++++
T Consensus       155 -------~~YaAaka~l~~la~~~~-~~Gi~v~~I~pg~~~~~g~~~~------~~~~~~~-------~~G~~~~~~~~~  213 (259)
T d2fr1a1         155 -------GGYAPGNAYLDGLAQQRR-SDGLPATAVAWGTWAGSGMAEG------PVADRFR-------RHGVIEMPPETA  213 (259)
T ss_dssp             -------TTTHHHHHHHHHHHHHHH-HTTCCCEEEEECCBC------------------CT-------TTTEECBCHHHH
T ss_pred             -------HHHHHHHHhHHHHHHHHH-hCCCCEEECCCCcccCCccccc------hHHHHHH-------hcCCCCCCHHHH
Confidence                   579999999998887776 5699999999998876643221      0111111       012345789999


Q ss_pred             HHHHHhhhcCCCCCc
Q 023689          235 AKAQVLLFESPAASG  249 (278)
Q Consensus       235 a~~~~~~~~~~~~~~  249 (278)
                      ++++..++.+.....
T Consensus       214 ~~~l~~~l~~~~~~~  228 (259)
T d2fr1a1         214 CRALQNALDRAEVCP  228 (259)
T ss_dssp             HHHHHHHHHTTCSSC
T ss_pred             HHHHHHHHhCCCceE
Confidence            999999998765543

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=6.1e-23  Score=166.05  Aligned_cols=220  Identities=18%  Similarity=0.091  Sum_probs=146.9

Q ss_pred             Cc-eEEEeCcchhhHHHHHHHHHHC-CCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChhhHHHHhc------
Q 023689            9 EE-TVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (278)
Q Consensus         9 ~~-~vlItGatG~iG~~l~~~L~~~-g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~------   79 (278)
                      || .+|||||+++||++++++|.+. |+ .|++..|+.++.+... .+..... ++.++++|++|.++++++++      
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dvs~~~sv~~~~~~~~~~~   79 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGL-SPRFHQLDIDDLQSIRALRDFLRKEY   79 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTC-CCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCC-cEEEEEEecCCHHHHHHHHHHHHHhc
Confidence            44 4599999999999999999986 88 8999999876644332 2222222 78999999999999888765      


Q ss_pred             -CccEEEEecccCCCCCCC----CchhhhhhhHHhHHHHHHHHHHhc--CCCEEEEecceeeeecCCCCCC--------c
Q 023689           80 -GCKGVFHVASPCTLEDPV----DPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKG--------K  144 (278)
Q Consensus        80 -~~d~vi~~a~~~~~~~~~----~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~--------~  144 (278)
                       ++|++|||||........    ++++..+++|+.|+..+.+++...  .-+++|++||..+..+.+....        .
T Consensus        80 g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~~~y~~~k~~~~  159 (275)
T d1wmaa1          80 GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSE  159 (275)
T ss_dssp             SSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCS
T ss_pred             CCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceeccccccchhhhhhhccc
Confidence             589999999976543222    356778999999999999988553  2358999999876544322100        0


Q ss_pred             cccCCC-------------CCchhhhhccCchhhhHHHHHHHHHHHHHHh-------cCCceEEEecceeeCCCCCCCCc
Q 023689          145 VFDETS-------------WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK-------HGVDVVAIHPATCLGPLMQPYLN  204 (278)
Q Consensus       145 ~~~E~~-------------~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-------~~~~~~~lrp~~i~g~~~~~~~~  204 (278)
                      ...+..             .........+...|+.||.....+.+.++++       .|+.++++.||.|-++.....  
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~~~--  237 (275)
T d1wmaa1         160 TITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPK--  237 (275)
T ss_dssp             SCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCTT--
T ss_pred             ccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcccCc--
Confidence            000000             0000000112246999999887776655543       389999999999988764322  


Q ss_pred             hhHHHHHHHhhCCCCcccccccCcccHHHHHHHHHhhhcCC-C---CCceEEec
Q 023689          205 ASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP-A---ASGRYLCT  254 (278)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~-~---~~~~~~~~  254 (278)
                                            ....++|.|+.++++...+ .   ..|.|+-.
T Consensus       238 ----------------------~~~~pee~A~~~~~~a~~~~~~~~~~G~~~~~  269 (275)
T d1wmaa1         238 ----------------------ATKSPEEGAETPVYLALLPPDAEGPHGQFVSE  269 (275)
T ss_dssp             ----------------------CSBCHHHHTHHHHHHHSCCTTCCCCCSCEEET
T ss_pred             ----------------------ccCCHHHHHHHHHHHHcCChhhcCCCeEEEEC
Confidence                                  1236789999888875332 2   24667653

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.88  E-value=3.9e-22  Score=159.90  Aligned_cols=225  Identities=14%  Similarity=0.106  Sum_probs=157.3

Q ss_pred             cCCceEEEeCcch--hhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            7 KEEETVCVTGANG--FIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         7 ~~~~~vlItGatG--~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      +++|++|||||+|  +||+++++.|+++|+ +|++..|+++..+...+...... ....+..|+.+..++.+.++     
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~   80 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLG-SDIVLQCDVAEDASIDTMFAELGKV   80 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSTTTHHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHhhcC-CcceeecccchHHHHHHHHHHhhhc
Confidence            6789999999998  899999999999999 78888887654443333222122 56788899999887777654     


Q ss_pred             --CccEEEEecccCCCCC---------CCCchhhhhhhHHhHHHHHHHHHHhc--CCCEEEEecceeeeecCCCCCCccc
Q 023689           80 --GCKGVFHVASPCTLED---------PVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVF  146 (278)
Q Consensus        80 --~~d~vi~~a~~~~~~~---------~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~  146 (278)
                        ..|+++|+|+......         ..+.+...+++|+.+...+.+++...  +-+.+|++||..+..+.+..     
T Consensus        81 ~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~~~~~-----  155 (258)
T d1qsga_          81 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNY-----  155 (258)
T ss_dssp             CSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTT-----
T ss_pred             ccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccCCCCc-----
Confidence              4699999997654311         11224556677788888888877654  23468888887765554432     


Q ss_pred             cCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccc
Q 023689          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (278)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (278)
                                     ..|+.+|.+.+.+.+.++.+   +||++++|+||.|.++..... ..............|     
T Consensus       156 ---------------~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~-~~~~~~~~~~~~~~p-----  214 (258)
T d1qsga_         156 ---------------NVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGI-KDFRKMLAHCEAVTP-----  214 (258)
T ss_dssp             ---------------THHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGS-TTHHHHHHHHHHHST-----
T ss_pred             ---------------HHHHHHHHHHHHHHHHHHHHhCccCceeeccccccccccccccc-chhhhHHHHHHhCCC-----
Confidence                           56888888888888777765   489999999999999875443 222333333333333     


Q ss_pred             cccCcccHHHHHHHHHhhhcCCC--CCceEEecCccccH
Q 023689          224 HWLGAVPVKDVAKAQVLLFESPA--ASGRYLCTNGIYQF  260 (278)
Q Consensus       224 ~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~~~~s~  260 (278)
                       ...+..++|+|.++.+++.+..  -.|..+..++.+++
T Consensus       215 -l~R~~~peeia~~v~fL~s~~s~~itG~~i~vDGG~~i  252 (258)
T d1qsga_         215 -IRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSI  252 (258)
T ss_dssp             -TSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             -CCCCcCHHHHHHHHHHHhCchhcCccCceEEECcCHHH
Confidence             2457889999999999986533  45766655555553

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.88  E-value=7.2e-22  Score=157.45  Aligned_cols=211  Identities=20%  Similarity=0.150  Sum_probs=141.0

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCC-eEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc--------
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYT-SINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--------   79 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~-~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--------   79 (278)
                      .|+||||||+++||++++++|+++|+. .|++..|+.+..+.+.+..   ..+++++.+|++|.++++++++        
T Consensus         3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~---~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   79 (250)
T d1yo6a1           3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIK---DSRVHVLPLTVTCDKSLDTFVSKVGEIVGS   79 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCC---CTTEEEEECCTTCHHHHHHHHHHHHHHHGG
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhh---CCceEEEEEecCCHHHHHHHHHHHHHHhCC
Confidence            379999999999999999999999962 6777888876665554432   2289999999999988887764        


Q ss_pred             -CccEEEEecccCCC-----CCCCCchhhhhhhHHhHHHHHHHHH----Hhc-----------CCCEEEEecceeeeecC
Q 023689           80 -GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAA----KRF-----------GVRRVVVTSSISAIVPN  138 (278)
Q Consensus        80 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~-----------~~~~~v~~Ss~~~~~~~  138 (278)
                       ++|++|||||....     +...+.++..+++|+.|+..+.+++    ++.           ...+++.+|+.......
T Consensus        80 ~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~  159 (250)
T d1yo6a1          80 DGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITD  159 (250)
T ss_dssp             GCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTT
T ss_pred             CCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccC
Confidence             37999999997543     1122357889999999988877765    222           12467777765443322


Q ss_pred             CCCCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhh
Q 023689          139 PGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQ  215 (278)
Q Consensus       139 ~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~  215 (278)
                      ...      . .      ...+...|+.||.+...+.+.++.+   .|++++++.||.|-++.....             
T Consensus       160 ~~~------~-~------~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~~~-------------  213 (250)
T d1yo6a1         160 NTS------G-S------AQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKN-------------  213 (250)
T ss_dssp             CCS------T-T------SSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC---------------------
T ss_pred             Ccc------c-c------cchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCCCC-------------
Confidence            211      0 0      0011135999999999888888864   489999999999987753211             


Q ss_pred             CCCCcccccccCcccHHHHHHHHHhhhcCCC--CCceEEe-cCcccc
Q 023689          216 GSKDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLC-TNGIYQ  259 (278)
Q Consensus       216 ~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~-~~~~~s  259 (278)
                                 ..+++++.++.++..+.+..  ..|.|+. .++++.
T Consensus       214 -----------~~~~~e~~a~~~~~~~~~~~~~~sG~f~~~~g~p~~  249 (250)
T d1yo6a1         214 -----------AALTVEQSTAELISSFNKLDNSHNGRFFMRNLKPYE  249 (250)
T ss_dssp             ----------------HHHHHHHHHHHTTCCGGGTTCEEETTEEECC
T ss_pred             -----------CCCCHHHHHHHHHHHHhcCCCCCCeEEECCCCeeCC
Confidence                       12467888888888887643  3466643 333443

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.87  E-value=5.7e-22  Score=156.59  Aligned_cols=190  Identities=13%  Similarity=0.134  Sum_probs=138.6

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHh-------c-
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAV-------E-   79 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~-------~-   79 (278)
                      ++|+||||||+|+||+++++.|.++|+ .|++++++......          ....+..|..+.++.....       . 
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~-~V~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNW-WVASIDVVENEEAS----------ASVIVKMTDSFTEQADQVTAEVGKLLGD   69 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSCCTTSS----------EEEECCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCcccccc----------ccceeecccCcHHHHHHHHHHHHHHhCC
Confidence            479999999999999999999999999 88888775543221          3344556666555444332       1 


Q ss_pred             -CccEEEEecccCCC-C----CCCCchhhhhhhHHhHHHHHHHHHHhc--CCCEEEEecceeeeecCCCCCCccccCCCC
Q 023689           80 -GCKGVFHVASPCTL-E----DPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (278)
Q Consensus        80 -~~d~vi~~a~~~~~-~----~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~  151 (278)
                       ++|++||+||.... .    ...+.++..+++|+.++.++.+++.++  +-+++|++||.++..+.++.          
T Consensus        70 ~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~~----------  139 (236)
T d1dhra_          70 QKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPGM----------  139 (236)
T ss_dssp             CCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTB----------
T ss_pred             CCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCccCC----------
Confidence             47999999985332 1    112456778999999999888887553  24689999998876555442          


Q ss_pred             CchhhhhccCchhhhHHHHHHHHHHHHHHh-----cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccccc
Q 023689          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK-----HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (278)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-----~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (278)
                                ..|+.||...+.+.+.++.+     .|++++++.||.+.++..+           +.....      ...
T Consensus       140 ----------~~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~-----------~~~~~~------~~~  192 (236)
T d1dhra_         140 ----------IGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNR-----------KSMPEA------DFS  192 (236)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHH-----------HHSTTS------CGG
T ss_pred             ----------cccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcch-----------hhCccc------hhh
Confidence                      57999999999999998864     4799999999999886421           111111      124


Q ss_pred             CcccHHHHHHHHHhhhcCC
Q 023689          227 GAVPVKDVAKAQVLLFESP  245 (278)
Q Consensus       227 ~~i~~~D~a~~~~~~~~~~  245 (278)
                      .+++++|+|+.+..++...
T Consensus       193 ~~~~pe~va~~~~~l~s~~  211 (236)
T d1dhra_         193 SWTPLEFLVETFHDWITGN  211 (236)
T ss_dssp             GSEEHHHHHHHHHHHHTTT
T ss_pred             cCCCHHHHHHHHHHHhCCC
Confidence            5788999999999988654

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.87  E-value=4.7e-21  Score=152.00  Aligned_cols=210  Identities=22%  Similarity=0.183  Sum_probs=148.4

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc------Ccc
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------GCK   82 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~------~~d   82 (278)
                      .|++|||||+++||++++++|.++|+ +|++..|+++..            +...+++|+++......+..      ..+
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga-~V~i~~~~~~~~------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~~   67 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGY-RVVVLDLRREGE------------DLIYVEGDVTREEDVRRAVARAQEEAPLF   67 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCCSS------------SSEEEECCTTCHHHHHHHHHHHHHHSCEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCcccc------------cceEeeccccchhhhHHHHHhhhcccccc
Confidence            38999999999999999999999999 898888876432            55678899998876666654      335


Q ss_pred             EEEEecccCCCC--------CCCCchhhhhhhHHhHHHHHHHHHHh----------cCCCEEEEecceeeeecCCCCCCc
Q 023689           83 GVFHVASPCTLE--------DPVDPEKELILPAVQGTLNVLEAAKR----------FGVRRVVVTSSISAIVPNPGWKGK  144 (278)
Q Consensus        83 ~vi~~a~~~~~~--------~~~~~~~~~~~~n~~~~~~ll~~~~~----------~~~~~~v~~Ss~~~~~~~~~~~~~  144 (278)
                      .++++++.....        ...+.++..+++|+.+...+.+.+..          .+.+++|++||..+..+.++.   
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~---  144 (241)
T d1uaya_          68 AVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQ---  144 (241)
T ss_dssp             EEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTC---
T ss_pred             chhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCCc---
Confidence            555555433221        11235577889998888877776522          234689999998887766553   


Q ss_pred             cccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHH---hcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcc
Q 023689          145 VFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ  221 (278)
Q Consensus       145 ~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~  221 (278)
                                       ..|+.+|...+.+.+.++.   ++||++++|.||.|.++......   ...........+.  
T Consensus       145 -----------------~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~---~~~~~~~~~~~~~--  202 (241)
T d1uaya_         145 -----------------AAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLP---EKAKASLAAQVPF--  202 (241)
T ss_dssp             -----------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSC---HHHHHHHHTTCCS--
T ss_pred             -----------------hhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhh---hhHHHHHHhcCCC--
Confidence                             4688888888877777775   45899999999999887543331   2223333333332  


Q ss_pred             cccccCcccHHHHHHHHHhhhcCCCCCceEEecCcccc
Q 023689          222 EYHWLGAVPVKDVAKAQVLLFESPAASGRYLCTNGIYQ  259 (278)
Q Consensus       222 ~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~~~s  259 (278)
                         ...+..++|+|+++++++++..-.|+.+..++.++
T Consensus       203 ---~~R~g~pedvA~~v~fL~s~~~iTG~~i~VDGG~~  237 (241)
T d1uaya_         203 ---PPRLGRPEEYAALVLHILENPMLNGEVVRLDGALR  237 (241)
T ss_dssp             ---SCSCCCHHHHHHHHHHHHHCTTCCSCEEEESTTCC
T ss_pred             ---CCCCcCHHHHHHHHHHHHhCCCCCCCEEEECCccc
Confidence               23467899999999999986555776655555444

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=7.8e-22  Score=158.84  Aligned_cols=202  Identities=15%  Similarity=0.047  Sum_probs=145.7

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc-CCCCCCCceEEEEccCCChhhHHHHhc------
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE------   79 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~------   79 (278)
                      ++||++||||||++||++++++|.++|+ .|++..|+.+..+.+.. ........+..+.+|+.+.+......+      
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~-~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   90 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM   90 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHh
Confidence            6789999999999999999999999999 89999997765443321 111112278889999999877766543      


Q ss_pred             -CccEEEEecccCCCCC----CCCchhhhhhhHHhHHHHHHHHHHh---cCCCEEEEecceeeeecCCCCCCccccCCCC
Q 023689           80 -GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKR---FGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (278)
Q Consensus        80 -~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~  151 (278)
                       ..|+++++|+......    ..+.++..+++|+.++..+.+++..   .+-+++|++||.++..+.++.          
T Consensus        91 g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~~~p~~----------  160 (269)
T d1xu9a_          91 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMV----------  160 (269)
T ss_dssp             TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTTC----------
T ss_pred             CCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhcCCCCCc----------
Confidence             5799999998755422    2345678899998888777766632   223689999998887665543          


Q ss_pred             CchhhhhccCchhhhHHHHHHHHHHHHHHh-----cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccccc
Q 023689          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK-----HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (278)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-----~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (278)
                                ..|+.||...+.+.+.++.+     .+|+++.+.||.|-++..           .+...+.      ...
T Consensus       161 ----------~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~-----------~~~~~~~------~~~  213 (269)
T d1xu9a_         161 ----------AAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETA-----------MKAVSGI------VHM  213 (269)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHH-----------HHHSCGG------GGG
T ss_pred             ----------hHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHH-----------HHhccCC------ccc
Confidence                      57899998888887777754     469999999999977531           1111111      123


Q ss_pred             CcccHHHHHHHHHhhhcCCC
Q 023689          227 GAVPVKDVAKAQVLLFESPA  246 (278)
Q Consensus       227 ~~i~~~D~a~~~~~~~~~~~  246 (278)
                      ...+++++|+.++..+....
T Consensus       214 ~~~~~e~~a~~i~~~~~~~~  233 (269)
T d1xu9a_         214 QAAPKEECALEIIKGGALRQ  233 (269)
T ss_dssp             GCBCHHHHHHHHHHHHHTTC
T ss_pred             cCCCHHHHHHHHHHHhhcCC
Confidence            45678999999988776543

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.86  E-value=2e-21  Score=153.49  Aligned_cols=188  Identities=17%  Similarity=0.198  Sum_probs=135.9

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHh---------cC
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAV---------EG   80 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~---------~~   80 (278)
                      .|||||||+|+||++++++|.++|+ .|++++|++.....          ....+.+|+.+.+......         .+
T Consensus         3 gkVlITGas~GIG~aia~~l~~~G~-~V~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   71 (235)
T d1ooea_           3 GKVIVYGGKGALGSAILEFFKKNGY-TVLNIDLSANDQAD----------SNILVDGNKNWTEQEQSILEQTASSLQGSQ   71 (235)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCCTTSS----------EEEECCTTSCHHHHHHHHHHHHHHHHTTCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCchhccc----------ccceeccccCchhHHHHHHHHHHHHhcCCC
Confidence            5789999999999999999999999 89999887653221          3345557776655443332         24


Q ss_pred             ccEEEEecccCCCC-----CCCCchhhhhhhHHhHHHHHHHHHHhc--CCCEEEEecceeeeecCCCCCCccccCCCCCc
Q 023689           81 CKGVFHVASPCTLE-----DPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (278)
Q Consensus        81 ~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~  153 (278)
                      +|++|||||.....     ...+.++..+++|+.++..+.+++..+  .-+++|++||..+..+.++.            
T Consensus        72 iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~~~~------------  139 (235)
T d1ooea_          72 VDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPSM------------  139 (235)
T ss_dssp             EEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTB------------
T ss_pred             eeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCcccc------------
Confidence            79999999864331     112356778999999998888877553  23689999998877665543            


Q ss_pred             hhhhhccCchhhhHHHHHHHHHHHHHHh-----cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCc
Q 023689          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEK-----HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (278)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~-----~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (278)
                              ..|+.+|.+.+.+.+.++.+     .+++++.+.||.+-++.           .+......      ....+
T Consensus       140 --------~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~-----------~~~~~~~~------~~~~~  194 (235)
T d1ooea_         140 --------IGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPM-----------NRKWMPNA------DHSSW  194 (235)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHH-----------HHHHSTTC------CGGGC
T ss_pred             --------cchHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcc-----------hhhhCcCC------ccccC
Confidence                    57999999999999998865     37889999999886653           12222221      13457


Q ss_pred             ccHHHHHHHHHhhhcCC
Q 023689          229 VPVKDVAKAQVLLFESP  245 (278)
Q Consensus       229 i~~~D~a~~~~~~~~~~  245 (278)
                      ++++|+++.++.++.++
T Consensus       195 ~~~~~va~~~~~~l~~~  211 (235)
T d1ooea_         195 TPLSFISEHLLKWTTET  211 (235)
T ss_dssp             BCHHHHHHHHHHHHHCG
T ss_pred             CCHHHHHHHHHHHhcCc
Confidence            88999999988766554

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.84  E-value=3.3e-20  Score=149.89  Aligned_cols=224  Identities=14%  Similarity=0.098  Sum_probs=140.9

Q ss_pred             cCCceEEEeCcch--hhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc-----
Q 023689            7 KEEETVCVTGANG--FIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (278)
Q Consensus         7 ~~~~~vlItGatG--~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----   79 (278)
                      +++|++|||||+|  +||.+++++|.++|+ +|++..|+++..+..+++..... ...++..|+++.+++.++++     
T Consensus         3 L~gK~alITGaag~~GIG~AiA~~la~~Ga-~V~i~~r~~~~~~~~~~l~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~   80 (274)
T d2pd4a1           3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLNESLEKRVRPIAQELN-SPYVYELDVSKEEHFKSLYNSVKKD   80 (274)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESSTTTHHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhCC-ceeEeeecccchhhHHHHHHHHHHH
Confidence            5789999999887  899999999999999 89889988654444433222222 56788999999988777764     


Q ss_pred             --CccEEEEecccCCCCCCC----CchhhhhhhH----HhHHHHHHHHHHhc-CCCE-EEEecceeeeecCCCCCCcccc
Q 023689           80 --GCKGVFHVASPCTLEDPV----DPEKELILPA----VQGTLNVLEAAKRF-GVRR-VVVTSSISAIVPNPGWKGKVFD  147 (278)
Q Consensus        80 --~~d~vi~~a~~~~~~~~~----~~~~~~~~~n----~~~~~~ll~~~~~~-~~~~-~v~~Ss~~~~~~~~~~~~~~~~  147 (278)
                        .+|++||+++........    ......+..+    ......+.....+. +... ++.+|+.+...+...       
T Consensus        81 ~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~~-------  153 (274)
T d2pd4a1          81 LGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAH-------  153 (274)
T ss_dssp             TSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTT-------
T ss_pred             cCCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeeccccccccccc-------
Confidence              579999999865441111    1112222222    22333344433332 2233 444444333322221       


Q ss_pred             CCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCccccc
Q 023689          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (278)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (278)
                                   ...|+.+|...+.+.+..+.+   +|++++++.||.+.++........ ...........|      
T Consensus       154 -------------~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~-~~~~~~~~~~~p------  213 (274)
T d2pd4a1         154 -------------YNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADF-RMILKWNEINAP------  213 (274)
T ss_dssp             -------------CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTH-HHHHHHHHHHST------
T ss_pred             -------------chhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCch-HHHHHHHhhhhh------
Confidence                         146888888888777776654   589999999999999865443221 222222222222      


Q ss_pred             ccCcccHHHHHHHHHhhhcCCC--CCceEEecCcccc
Q 023689          225 WLGAVPVKDVAKAQVLLFESPA--ASGRYLCTNGIYQ  259 (278)
Q Consensus       225 ~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~~~~s  259 (278)
                      ...+..++|+|.++.+++....  ..|..+..++.++
T Consensus       214 ~~r~~~pedIA~~v~fL~S~~s~~itG~~i~vDGG~~  250 (274)
T d2pd4a1         214 LRKNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAGYH  250 (274)
T ss_dssp             TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             ccCCcCHHHHHHHHHHHhChhhCCCcCceEEECCChh
Confidence            3567899999999999987543  3566555555444

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.84  E-value=4.3e-20  Score=149.93  Aligned_cols=222  Identities=16%  Similarity=0.123  Sum_probs=142.2

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCC-CCccccc-CCC-----------------CCCCceEEEEccC
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS-DSSHLFA-LPG-----------------AGDANLRVFEADV   68 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~-~~~~~~~-~~~-----------------~~~~~v~~~~~Dl   68 (278)
                      +|+.+|||||+++||++++++|.++|+ .|++..++.. ..+.+.. +..                 .....+....+|+
T Consensus         1 ~~pVAlITGas~GIG~aiA~~la~~Ga-~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv   79 (284)
T d1e7wa_           1 TVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV   79 (284)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCB
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccC
Confidence            367899999999999999999999999 7776655432 2211110 000                 0011334456778


Q ss_pred             CChhhHHHHhc-------CccEEEEecccCCCCCCC----Cch--------------hhhhhhHHhHHHHHHHHHHh---
Q 023689           69 LDSGAVSRAVE-------GCKGVFHVASPCTLEDPV----DPE--------------KELILPAVQGTLNVLEAAKR---  120 (278)
Q Consensus        69 ~d~~~~~~~~~-------~~d~vi~~a~~~~~~~~~----~~~--------------~~~~~~n~~~~~~ll~~~~~---  120 (278)
                      +++++++++++       ++|++||+||........    +.+              ...+.+|+.++..+.+++.+   
T Consensus        80 ~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~  159 (284)
T d1e7wa_          80 TLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVA  159 (284)
T ss_dssp             CHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhh
Confidence            88888888764       689999999976542211    111              23678899999888887532   


Q ss_pred             -------cCCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHH---hcCCceEEEe
Q 023689          121 -------FGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIH  190 (278)
Q Consensus       121 -------~~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lr  190 (278)
                             .+...+|+++|.....+.++.                    ..|+.+|...+.+.+.++.   ++|+++++|.
T Consensus       160 ~~~~~~~~~~~~ii~~~s~~~~~~~~~~--------------------~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~  219 (284)
T d1e7wa_         160 GTPAKHRGTNYSIINMVDAMTNQPLLGY--------------------TIYTMAKGALEGLTRSAALELAPLQIRVNGVG  219 (284)
T ss_dssp             TSCGGGSCSCEEEEEECCTTTTSCCTTC--------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred             hhHHHhcCCCCcccccccccccCCccce--------------------eeeccccccchhhhHHHHHHhCCccccccccc
Confidence                   124467777775554443332                    4688888888888777775   4599999999


Q ss_pred             cceeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHHHHHHHHHhhhcCCC--CCceEEecCccccH
Q 023689          191 PATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLCTNGIYQF  260 (278)
Q Consensus       191 p~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~~~~s~  260 (278)
                      ||.+-...     ..............|.     ...+..++|+|+++++++....  -.|+.+..|+.+++
T Consensus       220 PG~t~~~~-----~~~~~~~~~~~~~~pl-----~~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~sl  281 (284)
T d1e7wa_         220 PGLSVLVD-----DMPPAVWEGHRSKVPL-----YQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL  281 (284)
T ss_dssp             ESSBCCGG-----GSCHHHHHHHHTTCTT-----TTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             cccccccc-----cCCHHHHHHHHhcCCC-----CCCCCCHHHHHHHHHHHhCchhcCccCCeEEECcChhc
Confidence            99643222     1223444555554442     2456789999999999986543  35766666555553

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.80  E-value=5e-19  Score=142.36  Aligned_cols=222  Identities=14%  Similarity=0.090  Sum_probs=141.3

Q ss_pred             cCCceEEEeCcc--hhhHHHHHHHHHHCCCCeEEEEecCCCCC-cccccCCCCCCCceEEEEccCCChhhHHHHhc----
Q 023689            7 KEEETVCVTGAN--GFIGTWLVKTLLDNNYTSINATVFPGSDS-SHLFALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (278)
Q Consensus         7 ~~~~~vlItGat--G~iG~~l~~~L~~~g~~~v~~~~r~~~~~-~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~----   79 (278)
                      +++|++|||||+  .+||++++++|.++|+ +|++..|+.++. +.+.+..   ..+...+++|+++++++..+++    
T Consensus         4 l~gK~~lItGaag~~GIG~aiA~~la~~Ga-~Vil~~~~~~~~~~~~~~~~---~~~~~~~~~dv~~~~~~~~~~~~v~~   79 (268)
T d2h7ma1           4 LDGKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDRLRLIQRITDRL---PAKAPLLELDVQNEEHLASLAGRVTE   79 (268)
T ss_dssp             TTTCEEEECCCSSTTCHHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHTTS---SSCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHc---CCceeeEeeecccccccccccchhhh
Confidence            568999999964  5799999999999999 888888766442 2222221   1267788999999976665543    


Q ss_pred             ------CccEEEEecccCCCC---------CCCCchhhhhhhHHhHHHHHHHHHHhcC-CCEEEEecceeeeecCCCCCC
Q 023689           80 ------GCKGVFHVASPCTLE---------DPVDPEKELILPAVQGTLNVLEAAKRFG-VRRVVVTSSISAIVPNPGWKG  143 (278)
Q Consensus        80 ------~~d~vi~~a~~~~~~---------~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~v~~Ss~~~~~~~~~~~~  143 (278)
                            .+|+++|+|+.....         .....+...+.+|+.......+.+.... ....+.++|.......+..  
T Consensus        80 ~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~p~~--  157 (268)
T d2h7ma1          80 AIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMPAY--  157 (268)
T ss_dssp             HHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCCTTT--
T ss_pred             ccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcccccccccccccccccCccc--
Confidence                  369999999864321         1122334556666667766666665542 2334444443443333321  


Q ss_pred             ccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCC-----CC----chhHHHHH
Q 023689          144 KVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQP-----YL----NASCAVLQ  211 (278)
Q Consensus       144 ~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~-----~~----~~~~~~~~  211 (278)
                                        ..|+.+|...+.+.+.++.+   +|+++++|.||.+-++....     ..    .....+..
T Consensus       158 ------------------~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  219 (268)
T d2h7ma1         158 ------------------NWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEE  219 (268)
T ss_dssp             ------------------HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHH
T ss_pred             ------------------chhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHH
Confidence                              56888898888888877764   48999999999998763211     00    11122222


Q ss_pred             HHhhCCCCcccccccCcccHHHHHHHHHhhhcCCC--CCceEEecCcc
Q 023689          212 QLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLCTNGI  257 (278)
Q Consensus       212 ~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~~~  257 (278)
                      ......|.     .+.+..++|+|+++.+++....  -.|..+..|+.
T Consensus       220 ~~~~~~pl-----~rr~~~p~dva~~v~fL~Sd~a~~iTG~~i~vDGG  262 (268)
T d2h7ma1         220 GWDQRAPI-----GWNMKDATPVAKTVCALLSDWLPATTGDIIYADGG  262 (268)
T ss_dssp             HHHHHCTT-----CCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTT
T ss_pred             HHHhcCCC-----CCCCCCHHHHHHHHHHHhCchhcCccCCEEEECcC
Confidence            22233332     3457789999999999985432  35665554443

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.80  E-value=1.4e-18  Score=139.52  Aligned_cols=219  Identities=18%  Similarity=0.161  Sum_probs=140.0

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCC-ccc-ccCCCCCCCceEEEEccCCCh----hhHHHHh-----
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-SHL-FALPGAGDANLRVFEADVLDS----GAVSRAV-----   78 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~-~~~-~~~~~~~~~~v~~~~~Dl~d~----~~~~~~~-----   78 (278)
                      +++|||||+++||++++++|+++|+ +|++..|+.+.. +.+ .++..........++.|+.+.    +.+.+++     
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~-~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGF-RVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFR   80 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHH
Confidence            4789999999999999999999999 888888876532 211 111111112667777777654    3333332     


Q ss_pred             --cCccEEEEecccCCCCCCC---------------CchhhhhhhHHhHHHHHHHHHHhc---------CCCEEEEecce
Q 023689           79 --EGCKGVFHVASPCTLEDPV---------------DPEKELILPAVQGTLNVLEAAKRF---------GVRRVVVTSSI  132 (278)
Q Consensus        79 --~~~d~vi~~a~~~~~~~~~---------------~~~~~~~~~n~~~~~~ll~~~~~~---------~~~~~v~~Ss~  132 (278)
                        .++|++||+||........               ..+...+..|+.+...........         ....++.+|+.
T Consensus        81 ~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (266)
T d1mxha_          81 AFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDA  160 (266)
T ss_dssp             HHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCG
T ss_pred             HhCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhc
Confidence              3689999999975542111               112334455555555544444322         23356666665


Q ss_pred             eeeecCCCCCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHHh---cCCceEEEecceeeCCCCCCCCchhHHH
Q 023689          133 SAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAV  209 (278)
Q Consensus       133 ~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~  209 (278)
                      .+..+.++.                    ..|+.||...+.+.+.++.+   +|++++.|.||.+.++....     ...
T Consensus       161 ~~~~~~~~~--------------------~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~-----~~~  215 (266)
T d1mxha_         161 MTDLPLPGF--------------------CVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMP-----QET  215 (266)
T ss_dssp             GGGSCCTTC--------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSC-----HHH
T ss_pred             cccccCcch--------------------hhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCC-----HHH
Confidence            554433332                    57999999999888888764   58999999999998775332     233


Q ss_pred             HHHHhhCCCCcccccccCcccHHHHHHHHHhhhcCCC--CCceEEecCcccc
Q 023689          210 LQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLCTNGIYQ  259 (278)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~~~~s  259 (278)
                      ........|.     .+.+..++|+|+++++++....  ..|..+..|+.++
T Consensus       216 ~~~~~~~~pl-----~r~~~~peeva~~v~fL~s~~s~~itG~~i~vDGG~~  262 (266)
T d1mxha_         216 QEEYRRKVPL-----GQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLI  262 (266)
T ss_dssp             HHHHHTTCTT-----TSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHhcCCC-----CCCCCCHHHHHHHHHHHhCchhCCccCCeEEECccHh
Confidence            4444444442     2445789999999999997543  4676665555554

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.80  E-value=6.5e-18  Score=137.76  Aligned_cols=227  Identities=12%  Similarity=0.058  Sum_probs=140.9

Q ss_pred             ccCCceEEEeCcch--hhHHHHHHHHHHCCCCeEEEEecCCCC-------------CcccccCCCCCC-CceEEEEccC-
Q 023689            6 EKEEETVCVTGANG--FIGTWLVKTLLDNNYTSINATVFPGSD-------------SSHLFALPGAGD-ANLRVFEADV-   68 (278)
Q Consensus         6 ~~~~~~vlItGatG--~iG~~l~~~L~~~g~~~v~~~~r~~~~-------------~~~~~~~~~~~~-~~v~~~~~Dl-   68 (278)
                      ++++|++|||||+|  +||+++++.|.++|+ +|++..|++..             ............ .++..+..++ 
T Consensus         5 ~L~gK~alVTGass~~GIG~aiA~~la~~Ga-~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (297)
T d1d7oa_           5 DLRGKRAFIAGIADDNGYGWAVAKSLAAAGA-EILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFD   83 (297)
T ss_dssp             CCTTCEEEEECCSSSSSHHHHHHHHHHHTTC-EEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCC
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhcc
Confidence            57899999999987  999999999999999 78777664210             011100000000 0122222222 


Q ss_pred             -----------------CChhhHHHH-------hcCccEEEEecccCCC------CCCCCchhhhhhhHHhHHHHHHHHH
Q 023689           69 -----------------LDSGAVSRA-------VEGCKGVFHVASPCTL------EDPVDPEKELILPAVQGTLNVLEAA  118 (278)
Q Consensus        69 -----------------~d~~~~~~~-------~~~~d~vi~~a~~~~~------~~~~~~~~~~~~~n~~~~~~ll~~~  118 (278)
                                       .+...++++       +.++|++||+||....      +...++|...+++|+.+...+.+++
T Consensus        84 ~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~  163 (297)
T d1d7oa_          84 NPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHF  163 (297)
T ss_dssp             SGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             ccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHH
Confidence                             222222333       3368999999986432      2234567889999999999999988


Q ss_pred             HhcC--CCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHH----HhcCCceEEEecc
Q 023689          119 KRFG--VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFA----EKHGVDVVAIHPA  192 (278)
Q Consensus       119 ~~~~--~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~----~~~~~~~~~lrp~  192 (278)
                      ....  -+..+.+++.+........                   ...|..+|...+.+.+.++    .++|+++++|.||
T Consensus       164 ~~~~~~~g~~~~~~~~~~~~~~~~~-------------------~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG  224 (297)
T d1d7oa_         164 LPIMNPGGASISLTYIASERIIPGY-------------------GGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAG  224 (297)
T ss_dssp             GGGEEEEEEEEEEECGGGTSCCTTC-------------------TTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEC
T ss_pred             HHHhhcCCcceeeeehhhccccccc-------------------ccceecccccccccccccchhccccceEEecccccc
Confidence            6542  2345555554432221110                   1468888877766555443    3568999999999


Q ss_pred             eeeCCCCCCCCchhHHHHHHHhhCCCCcccccccCcccHHHHHHHHHhhhcCCC--CCceEEecCcccc
Q 023689          193 TCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLCTNGIYQ  259 (278)
Q Consensus       193 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~~~~s  259 (278)
                      .+.++..... ..............|      ...+..++|+|+++++++....  -.|+.+..|+.++
T Consensus       225 ~i~T~~~~~~-~~~~~~~~~~~~~~P------lgR~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~s  286 (297)
T d1d7oa_         225 PLGSRAAKAI-GFIDTMIEYSYNNAP------IQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLN  286 (297)
T ss_dssp             CCBCCCSSCC-SHHHHHHHHHHHHSS------SCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             cccchhhhhc-cCCHHHHHHHHhCCC------CCCCCCHHHHHHHHHHHhCchhcCCcCceEEECcCHh
Confidence            9999876543 233344444444444      3456899999999999986433  4676665555554

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.78  E-value=7.4e-18  Score=139.17  Aligned_cols=225  Identities=9%  Similarity=0.061  Sum_probs=142.3

Q ss_pred             CceEEEeC--cchhhHHHHHHHHHHCCCCeEEEEecCCCCC------------cccccCCCCCCCceEEEEc--------
Q 023689            9 EETVCVTG--ANGFIGTWLVKTLLDNNYTSINATVFPGSDS------------SHLFALPGAGDANLRVFEA--------   66 (278)
Q Consensus         9 ~~~vlItG--atG~iG~~l~~~L~~~g~~~v~~~~r~~~~~------------~~~~~~~~~~~~~v~~~~~--------   66 (278)
                      +|.+||||  ++.+||+.+++.|.++|+ +|++..+.....            ..................+        
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNV-KIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTC-EEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGG
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCC-EEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhc
Confidence            58999999  557999999999999999 777765532210            0000000000002223333        


Q ss_pred             ------------cCCChhhHHHHh-------cCccEEEEecccCCC------CCCCCchhhhhhhHHhHHHHHHHHHHhc
Q 023689           67 ------------DVLDSGAVSRAV-------EGCKGVFHVASPCTL------EDPVDPEKELILPAVQGTLNVLEAAKRF  121 (278)
Q Consensus        67 ------------Dl~d~~~~~~~~-------~~~d~vi~~a~~~~~------~~~~~~~~~~~~~n~~~~~~ll~~~~~~  121 (278)
                                  |+++.+++++++       .++|++||+||....      +...++|...+++|+.++..+.+++.+.
T Consensus        81 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~  160 (329)
T d1uh5a_          81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             ccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhh
Confidence                        555655555443       368999999986432      2234578889999999999999988664


Q ss_pred             --CCCEEEEecceeeeecCCCCCCccccCCCCCchhhhhccCchhhhHHHHHHHHHHHHHH----hcCCceEEEecceee
Q 023689          122 --GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAE----KHGVDVVAIHPATCL  195 (278)
Q Consensus       122 --~~~~~v~~Ss~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~----~~~~~~~~lrp~~i~  195 (278)
                        .-+++|.+||.++..+.++.                   .+.|+.+|...+.+.+.++.    ++||++++|.||.|-
T Consensus       161 m~~~GsIv~iss~~~~~~~p~y-------------------~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~  221 (329)
T d1uh5a_         161 MKPQSSIISLTYHASQKVVPGY-------------------GGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLK  221 (329)
T ss_dssp             EEEEEEEEEEECGGGTSCCTTC-------------------TTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCC
T ss_pred             cccccccccceeehhccccccc-------------------chhhhhhhccccccchhhHHHHhcccCcEEEEEecCccc
Confidence              23579999886665443321                   14689999888877777764    359999999999987


Q ss_pred             CCCCCC------------------------------------------CCchhHHHHHHHhhCCCCcccccccCcccHHH
Q 023689          196 GPLMQP------------------------------------------YLNASCAVLQQLLQGSKDTQEYHWLGAVPVKD  233 (278)
Q Consensus       196 g~~~~~------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  233 (278)
                      ++....                                          ................|      ...+..++|
T Consensus       222 T~a~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P------l~R~~~ped  295 (329)
T d1uh5a_         222 SRAATAINKLNNTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAP------LRQKLLSTD  295 (329)
T ss_dssp             CTTGGGCC------------------------------------------CHHHHHHHHHHHHSS------SCSCCCHHH
T ss_pred             chhhhcccchhhhhhhhhhhhhccccccccccccccccccchhhhhhhcccchHHHHHHHhccCC------CCCCcCHHH
Confidence            732110                                          00111222222222222      456789999


Q ss_pred             HHHHHHhhhcCCC--CCceEEecCcccc
Q 023689          234 VAKAQVLLFESPA--ASGRYLCTNGIYQ  259 (278)
Q Consensus       234 ~a~~~~~~~~~~~--~~~~~~~~~~~~s  259 (278)
                      +|.+++++.....  -.|+.+..++.++
T Consensus       296 vA~~v~fLaSd~s~~iTGq~i~VDGG~~  323 (329)
T d1uh5a_         296 IGSVASFLLSRESRAITGQTIYVDNGLN  323 (329)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHhCchhCCccCCeEEECCCcc
Confidence            9999999886532  3577766665554

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.75  E-value=3.2e-17  Score=130.78  Aligned_cols=224  Identities=17%  Similarity=0.121  Sum_probs=128.8

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHh--------cC
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAV--------EG   80 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~--------~~   80 (278)
                      ||+||||||+++||++++++|.++|+ +|++.+|++.+.                 ..|+.+.+......        ..
T Consensus         1 mkVvlITGas~GIG~aiA~~la~~Ga-~V~~~~~~~~~~-----------------~~d~~~~~~~~~~~~~~~~~~~~~   62 (257)
T d1fjha_           1 MSIIVISGCATGIGAATRKVLEAAGH-QIVGIDIRDAEV-----------------IADLSTAEGRKQAIADVLAKCSKG   62 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSSSE-----------------ECCTTSHHHHHHHHHHHHTTCTTC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECChHHH-----------------HHHhcCHHHHHHHHHHHHHHhCCC
Confidence            68999999999999999999999999 888888765321                 25666665544432        24


Q ss_pred             ccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHH----HhcCCCEEEEecceeeeecCCCCCCcccc-C-CCCCch
Q 023689           81 CKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFD-E-TSWTDL  154 (278)
Q Consensus        81 ~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~-E-~~~~~~  154 (278)
                      +|+++++|+....   .+.+.....+|..+...+.+..    .+........+++................ . ......
T Consensus        63 id~lv~~Ag~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i  139 (257)
T d1fjha_          63 MDGLVLCAGLGPQ---TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKA  139 (257)
T ss_dssp             CSEEEECCCCCTT---CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHH
T ss_pred             CcEEEEcCCCCCc---HHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEEEE
Confidence            7999999987543   3556777888888777666554    33444556666553332211100000000 0 000000


Q ss_pred             hh------hhccCchhhhHHHHHHHHHHHHHH---hcCCceEEEecceeeCCCCCCCCchhHHHHHHHhhCCCCcccccc
Q 023689          155 EY------CKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (278)
Q Consensus       155 ~~------~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (278)
                      ..      .......|+.+|...+.+.+.++.   ++||++++|.||.+-++....... .............     ..
T Consensus       140 ~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~-~~~~~~~~~~~~~-----Pl  213 (257)
T d1fjha_         140 RAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQ-DPRYGESIAKFVP-----PM  213 (257)
T ss_dssp             HHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC----------------------CCC-----ST
T ss_pred             eeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcC-CHHHHHHHHhcCC-----CC
Confidence            00      000013589999999888887775   458999999999998876433211 1111111111111     13


Q ss_pred             cCcccHHHHHHHHHhhhcCCC--CCceEEecCcccc
Q 023689          226 LGAVPVKDVAKAQVLLFESPA--ASGRYLCTNGIYQ  259 (278)
Q Consensus       226 ~~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~~~~s  259 (278)
                      ..+..++|+|+++.+++....  -.|..+..|+.+|
T Consensus       214 gR~g~p~eva~~v~fL~S~~s~~itG~~i~vDGG~t  249 (257)
T d1fjha_         214 GRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGID  249 (257)
T ss_dssp             TSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTTHH
T ss_pred             CCCcCHHHHHHHHHHHhCchhCCccCceEEeCCCcc
Confidence            456789999999999985433  4576666566554

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.51  E-value=4.5e-16  Score=118.27  Aligned_cols=107  Identities=13%  Similarity=0.033  Sum_probs=81.0

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      ++++|+||||||+|+||+.+++.|.++|+ +|++..|+.++.+.+.+...... ++.+..+|++|.+++++++.++|+||
T Consensus        20 ~l~gK~vlItGasgGIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~iDili   97 (191)
T d1luaa1          20 SVKGKKAVVLAGTGPVGMRSAALLAGEGA-EVVLCGRKLDKAQAAADSVNKRF-KVNVTAAETADDASRAEAVKGAHFVF   97 (191)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHH-TCCCEEEECCSHHHHHHHTTTCSEEE
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHhhcc-chhhcccchHHHHHHHHHHHhcc-chhhhhhhcccHHHHHHHhcCcCeee
Confidence            56899999999999999999999999999 89999998765444322111011 55678899999999999999999999


Q ss_pred             EecccCCCCCCCCchhhhhhhHHhHHHHH
Q 023689           86 HVASPCTLEDPVDPEKELILPAVQGTLNV  114 (278)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l  114 (278)
                      |+||........+.|+..+++|+.+..+.
T Consensus        98 n~Ag~g~~~~~~e~~~~~~~~nv~~~~~~  126 (191)
T d1luaa1          98 TAGAIGLELLPQAAWQNESSIEIVADYNA  126 (191)
T ss_dssp             ECCCTTCCCBCHHHHHTCTTCCEEEECCC
T ss_pred             ecCccccccCCHHHHHhhhcceeehhHhh
Confidence            99987544333445566666666555443

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.70  E-value=3.8e-08  Score=69.76  Aligned_cols=115  Identities=16%  Similarity=0.118  Sum_probs=81.1

Q ss_pred             eEEEeCcchhhHHHHHHHHHHCCC-CeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEecc
Q 023689           11 TVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (278)
Q Consensus        11 ~vlItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a~   89 (278)
                      ||.|+||+|.+|+.++-.|...|. +++..++.++.+...+ .+....  ....... .....+..+.++++|+|+..||
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~-Dl~~~~--~~~~~~~-~~~~~~~~~~~~~aDivVitag   77 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAA-DLSHIE--TRATVKG-YLGPEQLPDCLKGCDVVVIPAG   77 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHH-HHTTSS--SSCEEEE-EESGGGHHHHHTTCSEEEECCS
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhH-HHhhhh--hhcCCCe-EEcCCChHHHhCCCCEEEECCC
Confidence            799999999999999999998886 6788887754322221 111000  0101111 1234567788999999999998


Q ss_pred             cCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           90 PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        90 ~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      .....  .......++.|+...+.+++.+.+++.+.++.+.|
T Consensus        78 ~~~~~--g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivvt  117 (144)
T d1mlda1          78 VPRKP--GMTRDDLFNTNATIVATLTAACAQHCPDAMICIIS  117 (144)
T ss_dssp             CCCCT--TCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             cCCCC--CCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence            64432  34678899999999999999999998666666665

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.55  E-value=3.5e-08  Score=69.26  Aligned_cols=71  Identities=18%  Similarity=0.153  Sum_probs=59.3

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHH-hcCccEEEEe
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFHV   87 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~-~~~~d~vi~~   87 (278)
                      |+|+|.|+ |.+|+.+++.|.+.|+ +|++++++++..+.+....     +...+.+|.+|++.+.++ ++++|.++-+
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g~-~v~vid~d~~~~~~~~~~~-----~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~   72 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEI-----DALVINGDCTKIKTLEDAGIEDADMYIAV   72 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHC-----SSEEEESCTTSHHHHHHTTTTTCSEEEEC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCC-CcceecCChhhhhhhhhhh-----hhhhccCcccchhhhhhcChhhhhhhccc
Confidence            68999998 9999999999999999 8999998876655443210     677899999999999987 6788988865

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=98.51  E-value=2.1e-07  Score=66.71  Aligned_cols=125  Identities=10%  Similarity=0.074  Sum_probs=80.8

Q ss_pred             ccccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCC-CCCceEEEEccCCChhhHHHHhc
Q 023689            2 ASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGA-GDANLRVFEADVLDSGAVSRAVE   79 (278)
Q Consensus         2 ~~m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~-~~~~v~~~~~Dl~d~~~~~~~~~   79 (278)
                      |+|.+.+ +||.|+|+ |.+|+.++..|...+..++++++.+++..+-.. .+... ...+..   ..+.......++++
T Consensus         1 ~~~~~k~-~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~---~~~~~~~~~~~~~~   75 (154)
T d1pzga1           1 PALVQRR-KKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTN---VSVRAEYSYEAALT   75 (154)
T ss_dssp             CCCCSCC-CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCC---CCEEEECSHHHHHT
T ss_pred             CccccCC-CcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCe---eEEeccCchhhhhc
Confidence            4565444 78999998 999999998888888657888876654322110 00000 000000   00111123456789


Q ss_pred             CccEEEEecccCCCCCC---CCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           80 GCKGVFHVASPCTLEDP---VDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        80 ~~d~vi~~a~~~~~~~~---~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      ++|+|+-.|+.......   .......+..|......+++.+++++.+.++.+.|
T Consensus        76 ~adiVvitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~p~aiviivs  130 (154)
T d1pzga1          76 GADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVT  130 (154)
T ss_dssp             TCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             CCCeEEEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            99999999987554221   12567889999999999999999988776666665

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.51  E-value=4.1e-07  Score=64.72  Aligned_cols=117  Identities=15%  Similarity=0.150  Sum_probs=79.9

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCC-CeEEEEecCCCCCcc----ccc-CCCCCCCceEEEEccCCChhhHHHH
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSH----LFA-LPGAGDANLRVFEADVLDSGAVSRA   77 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~----~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~   77 (278)
                      |++..++||.|+|+ |.+|+.++..|...|. +++.+++++++...-    +.. ...... .+.+...|.       +.
T Consensus         1 m~~~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~-~~~~~~~d~-------~~   71 (148)
T d1ldna1           1 MKNNGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPK-PVDIWHGDY-------DD   71 (148)
T ss_dssp             CTTTTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSS-CCEEEECCG-------GG
T ss_pred             CCCCCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCC-CeEEEECCH-------HH
Confidence            56677789999997 9999999999998875 578888876543111    110 000011 333333332       35


Q ss_pred             hcCccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           78 VEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        78 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      ++++|+|+..|+.....  .....+.+..|....+.+.+..++++.+.++.+-|
T Consensus        72 l~daDvvvitag~~~~~--~~~R~dl~~~N~~i~~~i~~~i~~~~p~a~~ivvt  123 (148)
T d1ldna1          72 CRDADLVVICAGANQKP--GETRLDLVDKNIAIFRSIVESVMASGFQGLFLVAT  123 (148)
T ss_dssp             TTTCSEEEECCSCCCCT--TTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             hccceeEEEeccccccc--CcchhHHHHHHHHHHHHHHHHHHhhCCCceEEEec
Confidence            77899999999875432  34567888999999999999998887555555544

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.40  E-value=1.1e-06  Score=61.99  Aligned_cols=113  Identities=12%  Similarity=0.117  Sum_probs=75.4

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCC-CeEEEEecCCCCC--c----cccc-CCCCCCCceEEEEccCCChhhHHHHhcCc
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDS--S----HLFA-LPGAGDANLRVFEADVLDSGAVSRAVEGC   81 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~--~----~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~   81 (278)
                      |||.|+||+|.+|+.++..|...|. .++..+++++...  +    .+.. ...... +++....--.|    .+.++++
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~-~~~~~~~~~~d----~~~l~~a   75 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRS-DANIYVESDEN----LRIIDES   75 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCC-CCEEEEEETTC----GGGGTTC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhccccccc-CCccccCCcch----HHHhccc
Confidence            5899999999999999999999884 5888887764321  1    1111 001111 22221111112    2467899


Q ss_pred             cEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEe
Q 023689           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVT  129 (278)
Q Consensus        82 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~  129 (278)
                      |+||-.||.....  .......+..|....+.+.+...+++.+.++.+
T Consensus        76 DvVVitAG~~~~~--g~sR~dl~~~Na~iv~~i~~~i~~~~~~~iivV  121 (145)
T d1hyea1          76 DVVIITSGVPRKE--GMSRMDLAKTNAKIVGKYAKKIAEICDTKIFVI  121 (145)
T ss_dssp             SEEEECCSCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
T ss_pred             eEEEEecccccCC--CCChhhhhhhhHHHHHHHHHHHhccCCCeEEEE
Confidence            9999999875432  235788999999999999999988876655544

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.39  E-value=1.8e-06  Score=60.97  Aligned_cols=115  Identities=17%  Similarity=0.090  Sum_probs=73.6

Q ss_pred             ceEEEeCcchhhHHHHHHHHHH-CCC-CeEEEEecCCCCCcccccCCCCC-CCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689           10 ETVCVTGANGFIGTWLVKTLLD-NNY-TSINATVFPGSDSSHLFALPGAG-DANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~-~g~-~~v~~~~r~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      |||.|+|++|.+|+.++-.|.. .+. +++..++..+........+.... ......+    ...+. .+.+++.|+||.
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~Dl~h~~~~~~~~~~----~~~~~-~~~~~~aDvvvi   75 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGF----SGEDA-TPALEGADVVLI   75 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHHHHHTSCSSCEEEEE----CSSCC-HHHHTTCSEEEE
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHHHHHCCccccCCcEE----EcCCC-ccccCCCCEEEE
Confidence            5899999999999999987754 342 47888876432211100110000 0022211    11222 346889999999


Q ss_pred             ecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      +||...-.  .....+.+..|....+.+.+.+.+++.+.++.+-|
T Consensus        76 taG~~~k~--g~~R~dl~~~N~~i~~~v~~~i~~~~p~aivivvt  118 (145)
T d2cmda1          76 SAGVRRKP--GMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT  118 (145)
T ss_dssp             CCSCCCCT--TCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             CCCccCCC--CcchhhHHHHHHHHHHHHHHHHHhhCCCcEEEEcc
Confidence            99875432  34678899999999999999999987555555444

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=98.36  E-value=9.1e-07  Score=62.64  Aligned_cols=112  Identities=8%  Similarity=0.104  Sum_probs=72.8

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCC-CeEEEEecCCCCCcc----cccCCCCCCCceEEEEccCCChhhHHHHhcCccE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSH----LFALPGAGDANLRVFEADVLDSGAVSRAVEGCKG   83 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~----~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~   83 (278)
                      .|||.|+|+ |.+|..++..|...|. +++.+++++++..+-    +........ ......+|.       +.++++|+
T Consensus         5 ~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~-~~~~~~~d~-------~~~~~adi   75 (146)
T d1ez4a1           5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTA-PKKIYSGEY-------SDCKDADL   75 (146)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSC-CCEEEECCG-------GGGTTCSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccC-CceEeeccH-------HHhccccE
Confidence            469999996 9999999999999873 589999876543211    100000011 233444443       24689999


Q ss_pred             EEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        84 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      |+.+||.....  .......+..|+.....+.+..++++.+.++.+.|
T Consensus        76 vvitag~~~~~--g~~r~~l~~~N~~i~~~~~~~i~~~~p~aivivvt  121 (146)
T d1ez4a1          76 VVITAGAPQKP--GESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA  121 (146)
T ss_dssp             EEECCCC------------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EEEecccccCC--CCCHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeC
Confidence            99999865532  34567888999999999999999998777776665

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=98.35  E-value=2.8e-07  Score=64.58  Aligned_cols=70  Identities=14%  Similarity=0.124  Sum_probs=57.4

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHH-hcCccEEEEe
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFHV   87 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~-~~~~d~vi~~   87 (278)
                      |+++|.|+ |-+|+++++.|.+.|+ .|++++.+++..+.+...      ....+.+|.++++.+.++ ++++|.||-.
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~-~vvvid~d~~~~~~~~~~------~~~~~~gd~~~~~~l~~a~i~~a~~vi~~   71 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGH-EVLAVDINEEKVNAYASY------ATHAVIANATEENELLSLGIRNFEYVIVA   71 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTC-CCEEEESCHHHHHHTTTT------CSEEEECCTTCTTHHHHHTGGGCSEEEEC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCC-eEEEecCcHHHHHHHHHh------CCcceeeecccchhhhccCCccccEEEEE
Confidence            57899987 9999999999999999 888888877665554332      566788999999999887 7889988754

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.27  E-value=8.1e-07  Score=65.30  Aligned_cols=74  Identities=19%  Similarity=0.191  Sum_probs=59.0

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEec
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a   88 (278)
                      .|+|+|.|| |++|+.+++.|.++|+ +|++..|+.+....+..-..    .......+..+.....+.+...|.++.+.
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~-~V~v~dr~~~~a~~l~~~~~----~~~~~~~~~~~~~~~~~~i~~~~~~i~~~   75 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGI-KVTVACRTLESAKKLSAGVQ----HSTPISLDVNDDAALDAEVAKHDLVISLI   75 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTC-EEEEEESCHHHHHHHHTTCT----TEEEEECCTTCHHHHHHHHTTSSEEEECS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC-EEEEEECChHHHHHHHhccc----ccccccccccchhhhHhhhhccceeEeec
Confidence            489999988 9999999999999999 89999998877666544221    45556677777778888888888888653

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.26  E-value=2e-06  Score=60.73  Aligned_cols=71  Identities=11%  Similarity=0.048  Sum_probs=44.0

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCC---CCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNN---YTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g---~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      ||||-|.||||++|+.+++.|+++.   ..++....++............    .  ....++.+.    ..++++|++|
T Consensus         1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~~~----~--~~~~~~~~~----~~~~~~DivF   70 (146)
T d1t4ba1           1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGT----T--GTLQDAFDL----EALKALDIIV   70 (146)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGTC----C--CBCEETTCH----HHHHTCSEEE
T ss_pred             CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccccccCC----c--eeeecccch----hhhhcCcEEE
Confidence            6899999999999999999888763   2366666655443333221100    1  111222222    2467899999


Q ss_pred             Eecc
Q 023689           86 HVAS   89 (278)
Q Consensus        86 ~~a~   89 (278)
                      .+++
T Consensus        71 ~a~~   74 (146)
T d1t4ba1          71 TCQG   74 (146)
T ss_dssp             ECSC
T ss_pred             EecC
Confidence            8864

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=98.19  E-value=3.4e-06  Score=59.32  Aligned_cols=112  Identities=14%  Similarity=0.149  Sum_probs=71.9

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCC-CeEEEEecCCCCCccc-ccCCCC--CCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHL-FALPGA--GDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~-~~~~~~--~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      +||.|+|+ |.+|+.++-.|+.++. +++.+++++++..+.. ..+...  .........+   +    .+.++++|+|+
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~---~----~~~~~~adivv   73 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG---D----YSDVKDCDVIV   73 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----C----GGGGTTCSEEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeC---c----HHHhCCCceEE
Confidence            47999997 9999999999998875 5788888776543221 111110  0002222222   2    23578899999


Q ss_pred             EecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      -.||.....  .......+..|+.....+.+.+++++.+.++.+-|
T Consensus        74 itag~~~~~--~~~r~~l~~~N~~i~~~i~~~i~~~~p~ai~ivvt  117 (142)
T d1y6ja1          74 VTAGANRKP--GETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVS  117 (142)
T ss_dssp             ECCCC--------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECS
T ss_pred             EecccccCc--CcchhHHhhHHHHHHHHHHHHhhccCCCceEEEec
Confidence            999865432  34567889999999999999999987665555554

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=98.08  E-value=5.1e-06  Score=58.51  Aligned_cols=113  Identities=12%  Similarity=0.062  Sum_probs=75.7

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCC-CeEEEEecCCCCCcccc-cCCCC---CCCceEEEEccCCChhhHHHHhcCccEE
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLF-ALPGA---GDANLRVFEADVLDSGAVSRAVEGCKGV   84 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~~-~~~~~---~~~~v~~~~~Dl~d~~~~~~~~~~~d~v   84 (278)
                      |||.|+|| |.+|+.++..|...|. +++.+.+.++....... .+...   .....++...  .|    .+.++++|+|
T Consensus         1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~----~~~~~dadvv   73 (142)
T d1guza1           1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--ND----YADTANSDIV   73 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SC----GGGGTTCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CC----HHHhcCCeEE
Confidence            58999997 9999999999999874 58888887765432111 10000   0002222211  12    2357899999


Q ss_pred             EEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      +-+||.....  .......+..|......+.+..++++.+.++.+-|
T Consensus        74 vitag~~~~~--g~~r~~l~~~N~~i~~~i~~~i~~~~p~aivivvt  118 (142)
T d1guza1          74 IITAGLPRKP--GMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVS  118 (142)
T ss_dssp             EECCSCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECC
T ss_pred             EEEEecCCCC--CCchHHHHHHHHHHHHHHHHHhhccCCCeEEEEec
Confidence            9999864432  34567889999999999999999887665665554

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=98.05  E-value=1.2e-06  Score=63.00  Aligned_cols=74  Identities=16%  Similarity=0.171  Sum_probs=56.9

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      .+++++|||+|+ |-+|+.+++.|...|+..+++..|+.++...+..-.     +     +...+.+++.+.+.++|+||
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~-----~-----~~~~~~~~~~~~l~~~Divi   89 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL-----G-----GEAVRFDELVDHLARSDVVV   89 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH-----T-----CEECCGGGHHHHHHTCSEEE
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhh-----h-----cccccchhHHHHhccCCEEE
Confidence            457899999998 999999999999999877888888766554443211     1     12234567888999999999


Q ss_pred             Eeccc
Q 023689           86 HVASP   90 (278)
Q Consensus        86 ~~a~~   90 (278)
                      .+.+.
T Consensus        90 ~atss   94 (159)
T d1gpja2          90 SATAA   94 (159)
T ss_dssp             ECCSS
T ss_pred             EecCC
Confidence            99765

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=98.04  E-value=2.8e-05  Score=54.34  Aligned_cols=110  Identities=16%  Similarity=0.119  Sum_probs=74.9

Q ss_pred             eEEEeCcchhhHHHHHHHHHHCCC-CeEEEEecCCC--CCc----cccc-CCCCCCCceEEEEccCCChhhHHHHhcCcc
Q 023689           11 TVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGS--DSS----HLFA-LPGAGDANLRVFEADVLDSGAVSRAVEGCK   82 (278)
Q Consensus        11 ~vlItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~--~~~----~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d   82 (278)
                      ||.|+||+|.+|+.++-.|..++. +++..++.+..  ...    .+.. ..-..  ..+....|.   +    .++++|
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~--~~~i~~~~~---~----~~~~aD   72 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDS--NTRVRQGGY---E----DTAGSD   72 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTC--CCEEEECCG---G----GGTTCS
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccC--CceEeeCCH---H----HhhhcC
Confidence            799999999999999999999875 56777764321  111    1110 01111  334333432   2    357999


Q ss_pred             EEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        83 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      +|+-.||....  ......+.++.|....+.+.+..++++.+.++.+-|
T Consensus        73 iVvitaG~~~~--~g~~R~dl~~~N~~I~~~i~~~i~~~~p~~i~ivvt  119 (142)
T d1o6za1          73 VVVITAGIPRQ--PGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTS  119 (142)
T ss_dssp             EEEECCCCCCC--TTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECC
T ss_pred             EEEEecccccc--cCCchhhHHHHHHHHHHHHHHHHHhcCCCceEEEec
Confidence            99999986443  234678999999999999999999987665555544

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=98.03  E-value=1.5e-05  Score=56.39  Aligned_cols=115  Identities=10%  Similarity=0.085  Sum_probs=75.7

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCC---CCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGA---GDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~---~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      +||-|+|+ |.+|+.++..|...+..++.+++++++..+-.. .+...   ..........+      ..+.++++|+|+
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~------~~~~~~~advvv   76 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN------TYDDLAGADVVI   76 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC------CGGGGTTCSEEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc------cccccCCCcEEE
Confidence            58999996 999999999888888778888887664422110 00000   00011111111      124567899999


Q ss_pred             EecccCCCCC---CCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           86 HVASPCTLED---PVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        86 ~~a~~~~~~~---~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      .+|+......   ........+..|......+.+..++.+.+.++.+-|
T Consensus        77 itag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~p~aivivvt  125 (150)
T d1t2da1          77 VTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVT  125 (150)
T ss_dssp             ECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             EecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence            9998655422   123467889999999999999999987666666655

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=98.00  E-value=4.4e-06  Score=60.87  Aligned_cols=74  Identities=22%  Similarity=0.134  Sum_probs=52.7

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEe
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~   87 (278)
                      .+++|||+||+|.+|...++.+...|+ +|++.++++++.+..+++      ++..+ .|..+...-...-+++|+||.+
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~-~vi~~~~~~~~~~~~~~l------Ga~~~-i~~~~~~~~~~~~~g~D~v~d~   98 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLAL------GAEEA-ATYAEVPERAKAWGGLDLVLEV   98 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHHT------TCSEE-EEGGGHHHHHHHTTSEEEEEEC
T ss_pred             CCCEEEEEeccccchhhhhhhhccccc-cccccccccccccccccc------cccee-eehhhhhhhhhccccccccccc
Confidence            467999999999999999999999999 899998887766666554      22211 2333322222234579999997


Q ss_pred             cc
Q 023689           88 AS   89 (278)
Q Consensus        88 a~   89 (278)
                      .|
T Consensus        99 ~G  100 (171)
T d1iz0a2          99 RG  100 (171)
T ss_dssp             SC
T ss_pred             cc
Confidence            65

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=98.00  E-value=1.4e-05  Score=60.48  Aligned_cols=78  Identities=12%  Similarity=0.098  Sum_probs=55.6

Q ss_pred             ccccCCceEEEeCc----------------chhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEcc
Q 023689            4 EAEKEEETVCVTGA----------------NGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEAD   67 (278)
Q Consensus         4 m~~~~~~~vlItGa----------------tG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D   67 (278)
                      |+.+++|+||||+|                ||..|.+|++.+...|+ +|+++.-.......         ..+..+.. 
T Consensus         1 ~~dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga-~V~li~g~~~~~~p---------~~~~~~~~-   69 (223)
T d1u7za_           1 VNDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGA-NVTLVSGPVSLPTP---------PFVKRVDV-   69 (223)
T ss_dssp             CCTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTC-EEEEEECSCCCCCC---------TTEEEEEC-
T ss_pred             CcccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCC-chhhhhcccccCcc---------ccccccee-
Confidence            46788999999987                79999999999999999 88877654432111         04554443 


Q ss_pred             CCChh----hHHHHhcCccEEEEecccCCC
Q 023689           68 VLDSG----AVSRAVEGCKGVFHVASPCTL   93 (278)
Q Consensus        68 l~d~~----~~~~~~~~~d~vi~~a~~~~~   93 (278)
                       ...+    .+.+.++++|++|++|++..+
T Consensus        70 -~t~~~m~~~~~~~~~~~D~~i~aAAvsDf   98 (223)
T d1u7za_          70 -MTALEMEAAVNASVQQQNIFIGCAAVADY   98 (223)
T ss_dssp             -CSHHHHHHHHHHHGGGCSEEEECCBCCSE
T ss_pred             -hhhHHHHHHHHhhhccceeEeeeechhhh
Confidence             2333    344455789999999988665

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.97  E-value=5.5e-06  Score=58.11  Aligned_cols=111  Identities=11%  Similarity=0.121  Sum_probs=74.7

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCC-CeEEEEecCCCCCcccc-cCC---CCCCCceEEEEccCCChhhHHHHhcCccEE
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLF-ALP---GAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~~-~~~---~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~v   84 (278)
                      |||.|+|+ |.+|+.++..|..++. .++.+.+.+++...... .+.   .... .......|   +    +.++++|+|
T Consensus         1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~-~~~~~~~~---~----~~~~~adiv   71 (140)
T d1a5za1           1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTR-RANIYAGD---Y----ADLKGSDVV   71 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSC-CCEEEECC---G----GGGTTCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccc-cccccCCc---H----HHhcCCCEE
Confidence            58999997 9999999998888774 57888877653321100 000   0000 33333322   2    346899999


Q ss_pred             EEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      +-+||.....  .....+.+..|..-...+.+..++++.+.++.+-|
T Consensus        72 vitag~~~~~--g~~r~dl~~~N~~I~~~i~~~i~~~~p~aivivvt  116 (140)
T d1a5za1          72 IVAAGVPQKP--GETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVT  116 (140)
T ss_dssp             EECCCCCCCS--SCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EEecccccCC--CcchhhhhccccchHHHHHHHHHhcCCCcEEEEeC
Confidence            9999875542  24567888999999999999999987666666655

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.96  E-value=1.2e-05  Score=57.50  Aligned_cols=113  Identities=13%  Similarity=0.082  Sum_probs=75.6

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCC-CeEEEEecCCCCCcc----cccCCCCCCCceEEEEccCCChhhHHHHhcCccE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSH----LFALPGAGDANLRVFEADVLDSGAVSRAVEGCKG   83 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~----~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~   83 (278)
                      .+||-|+|+ |.+|+.++..|...|. +++..++++++...-    +...............+|   +    +.++++|+
T Consensus        20 ~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d---~----~~~~~adi   91 (160)
T d1i0za1          20 NNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKD---Y----SVTANSKI   91 (160)
T ss_dssp             SSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSS---G----GGGTTCSE
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccc---h----hhcccccE
Confidence            469999997 9999999999999985 678888775433211    111000000011111122   2    24788999


Q ss_pred             EEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        84 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      |+..||.....  .......+..|+...+.+.+..++.+.+.++.+-|
T Consensus        92 VVitAg~~~~~--g~tR~~l~~~N~~i~~~i~~~i~~~~p~aiiivvt  137 (160)
T d1i0za1          92 VVVTAGVRQQE--GESRLNLVQRNVNVFKFIIPQIVKYSPDCIIIVVS  137 (160)
T ss_dssp             EEECCSCCCCT--TCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EEEecCCcccc--CcchHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            99999875542  35567889999999999999999987665555544

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.94  E-value=6.6e-06  Score=60.54  Aligned_cols=78  Identities=14%  Similarity=0.064  Sum_probs=54.5

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHh--cCccEEE
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAV--EGCKGVF   85 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~--~~~d~vi   85 (278)
                      .+.+|||+||+|.+|...++.....|+ +|+++++++++.+.++.+..    ...+..-|-...+.+.+..  +++|+||
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga-~vi~~~~~~~~~~~~~~~Ga----~~vi~~~~~~~~~~~~~~~~~~Gvd~v~  103 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLKQIGF----DAAFNYKTVNSLEEALKKASPDGYDCYF  103 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTC----SEEEETTSCSCHHHHHHHHCTTCEEEEE
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCC-EEEEeCCCHHHHHHHHhhhh----hhhcccccccHHHHHHHHhhcCCCceeE
Confidence            478999999999999999999999999 99999988776666555421    2222223333333333333  3689999


Q ss_pred             Eeccc
Q 023689           86 HVASP   90 (278)
Q Consensus        86 ~~a~~   90 (278)
                      ++.|.
T Consensus       104 D~vG~  108 (182)
T d1v3va2         104 DNVGG  108 (182)
T ss_dssp             ESSCH
T ss_pred             EecCc
Confidence            98753

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.93  E-value=2.4e-06  Score=61.14  Aligned_cols=108  Identities=17%  Similarity=0.021  Sum_probs=67.3

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCC---CeEEEEe--cCCCCCccccc----CCCCCCCceEEEEccCCChhhHHHHhc
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNY---TSINATV--FPGSDSSHLFA----LPGAGDANLRVFEADVLDSGAVSRAVE   79 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~---~~v~~~~--r~~~~~~~~~~----~~~~~~~~v~~~~~Dl~d~~~~~~~~~   79 (278)
                      .+||.|+||+|++|++++-.|...+.   ...+...  ......+....    +..........+..    .+...+.++
T Consensus         4 p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~   79 (154)
T d1y7ta1           4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEA----TDDPKVAFK   79 (154)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEE----ESCHHHHTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhcccccccccccc----CCchhhhcc
Confidence            46999999999999999999987653   1111111  11111111110    00001002222222    233467889


Q ss_pred             CccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcC
Q 023689           80 GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG  122 (278)
Q Consensus        80 ~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~  122 (278)
                      ++|+||-.||....  ...+..+.+..|+...+.+.+...++.
T Consensus        80 ~advViitaG~~~~--pg~~r~dl~~~N~~i~~~~~~~i~k~a  120 (154)
T d1y7ta1          80 DADYALLVGAAPRK--AGMERRDLLQVNGKIFTEQGRALAEVA  120 (154)
T ss_dssp             TCSEEEECCCCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             cccEEEeecCcCCC--CCCcHHHHHHHHHHHHHHHHHHHHHhC
Confidence            99999999987543  334577889999999999999998864

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.92  E-value=1.5e-05  Score=56.09  Aligned_cols=113  Identities=13%  Similarity=0.098  Sum_probs=72.6

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCC-CeEEEEecCCCCCcc----ccc-CCCCCCCceEEEEccCCChhhHHHHhcCccE
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSH----LFA-LPGAGDANLRVFEADVLDSGAVSRAVEGCKG   83 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~----~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~   83 (278)
                      |||.|+|+ |.+|..++-.|+.+|. .++.+.+.+++..+.    +.. ...... .......|   +    +.++++|+
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~-~~~~~~~d---~----~~l~~adi   72 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEA-HGNIVIND---W----AALADADV   72 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSS-CCEEEESC---G----GGGTTCSE
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCC-ccceeccC---H----HHhccccE
Confidence            78999996 9999999999998874 578888775543211    100 000000 22222222   2    34689999


Q ss_pred             EEEecccCCCC--CCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           84 VFHVASPCTLE--DPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        84 vi~~a~~~~~~--~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      ||-.||.....  ....+....++.|......+.+..++++.+.++.+-|
T Consensus        73 VVitaG~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~~p~aivivvt  122 (146)
T d1hyha1          73 VISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVIS  122 (146)
T ss_dssp             EEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EEEeccccccccccCCccHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEec
Confidence            99999864421  1123456778899999999999999987666666665

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.91  E-value=4.5e-06  Score=61.00  Aligned_cols=74  Identities=15%  Similarity=0.123  Sum_probs=52.6

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHH---hc--Ccc
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA---VE--GCK   82 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~---~~--~~d   82 (278)
                      .+.+|||+||+|.+|...++.+...|+ +|+++++++++.+..+++      +...+ .|..+.+..+++   ..  ++|
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~-~vi~~~~~~~~~~~~~~~------Ga~~v-i~~~~~~~~~~i~~~t~~~g~d   99 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQN------GAHEV-FNHREVNYIDKIKKYVGEKGID   99 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHT------TCSEE-EETTSTTHHHHHHHHHCTTCEE
T ss_pred             CCCEEEEEeccccccccccccccccCc-cccccccccccccccccc------Ccccc-cccccccHHHHhhhhhccCCce
Confidence            467999999999999999999999999 899888876655555544      22211 355555433333   22  589


Q ss_pred             EEEEecc
Q 023689           83 GVFHVAS   89 (278)
Q Consensus        83 ~vi~~a~   89 (278)
                      +||.+.+
T Consensus       100 ~v~d~~g  106 (174)
T d1yb5a2         100 IIIEMLA  106 (174)
T ss_dssp             EEEESCH
T ss_pred             EEeeccc
Confidence            9998865

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.91  E-value=1.8e-06  Score=64.35  Aligned_cols=40  Identities=18%  Similarity=0.109  Sum_probs=34.3

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccc
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL   50 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~   50 (278)
                      |||.|+||+|.+|+.|++.|.++|+ +|++..|++++.+.+
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G~-~V~l~~R~~e~~~~l   40 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLGH-EIVVGSRREEKAEAK   40 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSHHHHHHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHH
Confidence            5788999999999999999999999 899999987654433

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.90  E-value=3.3e-05  Score=56.65  Aligned_cols=85  Identities=14%  Similarity=0.039  Sum_probs=64.0

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCC--CCCceEEEEccCCChhhHHHHhcCccE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGA--GDANLRVFEADVLDSGAVSRAVEGCKG   83 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~--~~~~v~~~~~Dl~d~~~~~~~~~~~d~   83 (278)
                      ++++|+|+|.|+ |+.|+.++..|.+.|...+++..|+++..+....+...  ..........|+.+.+.+.+.+..+|+
T Consensus        15 ~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di   93 (182)
T d1vi2a1          15 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADI   93 (182)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSE
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhcccce
Confidence            456799999998 88999999999999988898999987765443221000  000344556888898999999999999


Q ss_pred             EEEecccC
Q 023689           84 VFHVASPC   91 (278)
Q Consensus        84 vi~~a~~~   91 (278)
                      |||+....
T Consensus        94 iIN~Tp~G  101 (182)
T d1vi2a1          94 LTNGTKVG  101 (182)
T ss_dssp             EEECSSTT
T ss_pred             eccccCCc
Confidence            99997653

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.89  E-value=6.5e-06  Score=57.80  Aligned_cols=110  Identities=13%  Similarity=0.009  Sum_probs=74.9

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCC-CeEEEEecCCCCCcc----c---ccCCCCCCCceEEEEccCCChhhHHHHhcCc
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSH----L---FALPGAGDANLRVFEADVLDSGAVSRAVEGC   81 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~----~---~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~   81 (278)
                      |||.|+|+ |.+|..++..|..+|. +++.+++.+++...-    +   ......   ..+....  .|   . +.++++
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~---~~~i~~~--~d---~-~~~~~a   70 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDK---YPKIVGG--AD---Y-SLLKGS   70 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTC---CCEEEEE--SC---G-GGGTTC
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCC---CCccccC--CC---H-HHhccc
Confidence            58999997 9999999999988774 578888776543211    0   001100   1122211  11   1 367899


Q ss_pred             cEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        82 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      |+|+-.|+.....  .....+.+..|......+.+.+++++...++.+-|
T Consensus        71 diVvitag~~~~~--g~~r~~l~~~n~~i~~~i~~~i~~~~p~aivivvt  118 (142)
T d1ojua1          71 EIIVVTAGLARKP--GMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT  118 (142)
T ss_dssp             SEEEECCCCCCCS--SCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred             cEEEEeccccCCC--CCchHHHHHHhhHHHHHHHHHHHhhCCCcEEEEec
Confidence            9999998864432  34578899999999999999999987666666665

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=97.89  E-value=1.2e-05  Score=58.47  Aligned_cols=114  Identities=17%  Similarity=0.059  Sum_probs=69.5

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHC---CCC---eEEEEecCCCCCccccc----CCCCCCCceEEEEccCCChhhHHHHhc
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDN---NYT---SINATVFPGSDSSHLFA----LPGAGDANLRVFEADVLDSGAVSRAVE   79 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~---g~~---~v~~~~r~~~~~~~~~~----~~~~~~~~v~~~~~Dl~d~~~~~~~~~   79 (278)
                      -||.||||+|.||.+++-.|.+.   |..   .+..++.... ...+..    +.........-+.  .+  +...+.++
T Consensus        25 ~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~-~~~l~g~~mdl~d~a~~~~~~~~--~~--~~~~~~~~   99 (175)
T d7mdha1          25 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERS-FQALEGVAMELEDSLYPLLREVS--IG--IDPYEVFE   99 (175)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGG-HHHHHHHHHHHHTTTCTTEEEEE--EE--SCHHHHTT
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccc-cchhcchhhhhcccccccccCcc--cc--ccchhhcc
Confidence            48999999999999999998874   221   2222222221 111110    0000000111111  11  23567889


Q ss_pred             CccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCC-C-EEEEec
Q 023689           80 GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV-R-RVVVTS  130 (278)
Q Consensus        80 ~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~-~~v~~S  130 (278)
                      ++|+||-.||....  ........+..|......+.+++.++.. . +++.+|
T Consensus       100 ~aDvVvi~ag~~rk--pg~tR~Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~  150 (175)
T d7mdha1         100 DVDWALLIGAKPRG--PGMERAALLDINGQIFADQGKALNAVASKNVKVLVVG  150 (175)
T ss_dssp             TCSEEEECCCCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             CCceEEEeeccCCC--CCCcHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEec
Confidence            99999999987543  3456788999999999999999988642 2 344444

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.87  E-value=3.5e-05  Score=54.89  Aligned_cols=115  Identities=12%  Similarity=0.028  Sum_probs=74.8

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCC-CeEEEEecCCCCCc----ccccCCCCCCCceEEEEccCCChhhHHHHhcCc
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSS----HLFALPGAGDANLRVFEADVLDSGAVSRAVEGC   81 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~----~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~   81 (278)
                      .+..||.|+|+ |.+|..++..|...|. +++.+++++++...    .+................|   +    +.++++
T Consensus        17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d---~----~~~~~a   88 (159)
T d2ldxa1          17 LSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKD---Y----NVSANS   88 (159)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESS---G----GGGTTE
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccc---h----hhhccc
Confidence            34458999996 9999999999998875 57888877653321    1111000001022222222   2    346889


Q ss_pred             cEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        82 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      |+|+..||.....  .......++.|+...+.+.+..++++.+.++.+-|
T Consensus        89 divvitag~~~~~--~~~R~dll~~N~~i~~~i~~~i~~~~p~~ivivvt  136 (159)
T d2ldxa1          89 KLVIITAGARMVS--GQTRLDLLQRNVAIMKAIVPGVIQNSPDCKIIVVT  136 (159)
T ss_dssp             EEEEECCSCCCCT--TTCSSCTTHHHHHHHHHHTTTHHHHSTTCEEEECS
T ss_pred             cEEEEecccccCC--CCCHHHHHHHHHHHHHHHHHHHhccCCCeEEEEeC
Confidence            9999998875543  24456789999999999999988887555555544

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=97.87  E-value=6e-05  Score=52.82  Aligned_cols=94  Identities=14%  Similarity=0.146  Sum_probs=53.5

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCC-C--CeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNN-Y--TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g-~--~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      |||-|.||||++|+.|++.|+++. +  .++..+..+....... .+...   ..  ...+..+    .+.++++|+||.
T Consensus         1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~~-~~~~~---~~--~~~~~~~----~~~~~~~DvvF~   70 (147)
T d1mb4a1           1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAP-NFGKD---AG--MLHDAFD----IESLKQLDAVIT   70 (147)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBCC-CSSSC---CC--BCEETTC----HHHHTTCSEEEE
T ss_pred             CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEecccccccccc-ccCCc---ce--eeecccc----hhhhccccEEEE
Confidence            579999999999999999988653 2  2555444433322221 11110   00  0111222    234688999998


Q ss_pred             ecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCC-EEEEecc
Q 023689           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTSS  131 (278)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~-~~v~~Ss  131 (278)
                      +...        ..          +..+...+.+.+.+ .+|=.|+
T Consensus        71 alp~--------~~----------s~~~~~~l~~~g~~~~VIDlSs   98 (147)
T d1mb4a1          71 CQGG--------SY----------TEKVYPALRQAGWKGYWIDAAS   98 (147)
T ss_dssp             CSCH--------HH----------HHHHHHHHHHTTCCSEEEESSS
T ss_pred             ecCc--------hH----------HHHHhHHHHHcCCceEEEeCCc
Confidence            7532        11          34566666777754 4666665

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=97.87  E-value=1.8e-05  Score=55.55  Aligned_cols=113  Identities=14%  Similarity=0.110  Sum_probs=68.9

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCC---CCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGA---GDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~---~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      +||-|+|+ |.+|..++-.|..++..++.+++.+++...... .+...   ......+...  .|   . +.+++.|+||
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~--~d---~-~~~~~advvv   74 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NN---Y-ADTANSDVIV   74 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SC---G-GGGTTCSEEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEec--Cc---H-HHhcCCCEEE
Confidence            58999997 999999999988887657888877654321110 00000   0001111100  11   1 2357889999


Q ss_pred             EecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      -+||.....  .......+..|......+.+...+++.+.++.+.|
T Consensus        75 itag~~~~~--~~~r~dl~~~N~~i~~~i~~~i~k~~p~aivivvt  118 (142)
T d1uxja1          75 VTSGAPRKP--GMSREDLIKVNADITRACISQAAPLSPNAVIIMVN  118 (142)
T ss_dssp             ECCSCC-----------CHHHHHHHHHHHHHHHGGGCTTCEEEECS
T ss_pred             EeeeccCCc--CcchhHHHhHHHHHHHHHHHHHhccCCCceEEEeC
Confidence            999865432  24456788999999999999999987666666655

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.86  E-value=3.2e-06  Score=52.44  Aligned_cols=44  Identities=27%  Similarity=0.271  Sum_probs=37.5

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF   51 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~   51 (278)
                      .+++++||+||+|.+|...++.+...|+ +|+++++++++.+.++
T Consensus        30 ~~~~~vlI~gasGgVG~~aiQlak~~G~-~Vi~~t~s~~k~~~~~   73 (77)
T d1o8ca2          30 PQDGEIVVTGASGGVGSTAVALLHKLGY-QVVAVSGRESTHEYLK   73 (77)
T ss_dssp             GGGCEEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHH
T ss_pred             cCCCcEEEEeCCCcHHHHHHHHHHHcCC-eEEEEECCHHHHHHHH
Confidence            3467999999999999999999899999 8999998887665543

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.85  E-value=4.7e-06  Score=61.34  Aligned_cols=74  Identities=18%  Similarity=0.108  Sum_probs=52.8

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChh---hHHHHh--cCcc
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSG---AVSRAV--EGCK   82 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~---~~~~~~--~~~d   82 (278)
                      .+.+|||+||+|.+|...++.+...|+ .|+++++++++.+.++++      ++..+ .|..+++   .+.+..  +++|
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~-~vi~~~~~~~~~~~l~~~------Ga~~v-i~~~~~~~~~~v~~~t~~~g~d   96 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLSRL------GVEYV-GDSRSVDFADEILELTDGYGVD   96 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHTT------CCSEE-EETTCSTHHHHHHHHTTTCCEE
T ss_pred             CCCEEEEECCCCCcccccchhhccccc-cceeeecccccccccccc------ccccc-ccCCccCHHHHHHHHhCCCCEE
Confidence            367999999999999999999988999 888888877666555543      22222 3444543   333333  3689


Q ss_pred             EEEEecc
Q 023689           83 GVFHVAS   89 (278)
Q Consensus        83 ~vi~~a~   89 (278)
                      ++|.+.+
T Consensus        97 ~v~d~~g  103 (183)
T d1pqwa_          97 VVLNSLA  103 (183)
T ss_dssp             EEEECCC
T ss_pred             EEEeccc
Confidence            9999875

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=97.81  E-value=6e-06  Score=60.09  Aligned_cols=74  Identities=16%  Similarity=0.178  Sum_probs=44.3

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEec
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a   88 (278)
                      |+||-|.||||++|+.|++.|.++.+.++..+..+....+.+......   ...  ..++.. ....+..+++|+||.+.
T Consensus         1 MikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~aG~~i~~~~p~---~~~--~~~~~~-~~~~~~~~~~dvvf~a~   74 (176)
T d1vkna1           1 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPS---TLE--NSILSE-FDPEKVSKNCDVLFTAL   74 (176)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGG---GCC--CCBCBC-CCHHHHHHHCSEEEECC
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCCceEEEeeccccCCCcccccCch---hhc--cccccc-cCHhHhccccceEEEcc
Confidence            689999999999999999999988765666665444333333211000   000  011211 22334456789998664

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.79  E-value=2e-05  Score=55.41  Aligned_cols=93  Identities=22%  Similarity=0.155  Sum_probs=52.9

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCC--CeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNY--TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~--~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      .|+|.|.||||++|+.|++.|.+++|  .++..+..+....+.+...      .-.....++.     ...++++|++|.
T Consensus         2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i~~~------~~~~~~~~~~-----~~~~~~~d~vf~   70 (144)
T d2hjsa1           2 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFA------ESSLRVGDVD-----SFDFSSVGLAFF   70 (144)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEET------TEEEECEEGG-----GCCGGGCSEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCcceeec------cccchhccch-----hhhhccceEEEe
Confidence            36899999999999999999976543  3666555444333332211      1111112221     123567899887


Q ss_pred             ecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      +++..                  ....+...+.+.+ .++|-.|+
T Consensus        71 a~p~~------------------~s~~~~~~~~~~g-~~VID~Ss   96 (144)
T d2hjsa1          71 AAAAE------------------VSRAHAERARAAG-CSVIDLSG   96 (144)
T ss_dssp             CSCHH------------------HHHHHHHHHHHTT-CEEEETTC
T ss_pred             cCCcc------------------hhhhhccccccCC-ceEEeech
Confidence            65320                  1233445555566 35776665

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=97.79  E-value=1.3e-05  Score=56.15  Aligned_cols=112  Identities=13%  Similarity=0.062  Sum_probs=74.8

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCC-CeEEEEecCCCCCcc----cccCCCCCCCceEEEEccCCChhhHHHHhcCccEE
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSH----LFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~----~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~v   84 (278)
                      .||.|+|+ |.+|++++-.|..+|. +++.+++++++..+-    +........ ...+...  .+   + +.++++|+|
T Consensus         2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~-~~~i~~~--~~---~-~~~~daDvV   73 (143)
T d1llda1           2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYP-TVSIDGS--DD---P-EICRDADMV   73 (143)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGST-TCEEEEE--SC---G-GGGTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCC-CceeecC--CC---H-HHhhCCcEE
Confidence            37999997 9999999999998885 578888876543211    111000000 2222211  11   2 246789999


Q ss_pred             EEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      +-.||.....  .....+.+..|....+.+.+.+++++.+.++.+-|
T Consensus        74 VitaG~~~~~--g~~R~dl~~~N~~i~~~i~~~i~~~~p~ai~ivvt  118 (143)
T d1llda1          74 VITAGPRQKP--GQSRLELVGATVNILKAIMPNLVKVAPNAIYMLIT  118 (143)
T ss_dssp             EECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred             EEecccccCC--CCchhhhhhhhHHHHHHHHHHHHhhCCCeEEEEeC
Confidence            9999875432  34567899999999999999999987665655554

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.78  E-value=1.2e-05  Score=58.63  Aligned_cols=76  Identities=21%  Similarity=0.256  Sum_probs=51.0

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHh--cCccEEE
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAV--EGCKGVF   85 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~--~~~d~vi   85 (278)
                      .+.+|||+||+|++|...++.....|+ .|++..+++++.+....+..    .. .+..+-.+.+ ..+..  +++|+||
T Consensus        31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga-~Viat~~s~~k~~~~~~lGa----~~-vi~~~~~~~~-~~~~~~~~gvD~vi  103 (176)
T d1xa0a2          31 ERGPVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRVLGA----KE-VLAREDVMAE-RIRPLDKQRWAAAV  103 (176)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHHTTC----SE-EEECC----------CCSCCEEEEE
T ss_pred             CCCEEEEEeccchHHHHHHHHHHHcCC-ceEEecCchHHHHHHHhccc----ce-eeecchhHHH-HHHHhhccCcCEEE
Confidence            357899999999999999999999999 89999998888777766521    21 2221111111 11222  2689999


Q ss_pred             Eeccc
Q 023689           86 HVASP   90 (278)
Q Consensus        86 ~~a~~   90 (278)
                      .+.+.
T Consensus       104 d~vgg  108 (176)
T d1xa0a2         104 DPVGG  108 (176)
T ss_dssp             ECSTT
T ss_pred             EcCCc
Confidence            98764

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.75  E-value=3.7e-05  Score=54.55  Aligned_cols=41  Identities=15%  Similarity=0.245  Sum_probs=36.2

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCC
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS   47 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~   47 (278)
                      +.+||||.|+||.|.+|+.+++.|.+.|| +|.+.+|+....
T Consensus         6 ~~~~~kI~iIGg~G~mG~~la~~L~~~G~-~V~~~d~~~~~~   46 (152)
T d2pv7a2           6 NSDIHKIVIVGGYGKLGGLFARYLRASGY-PISILDREDWAV   46 (152)
T ss_dssp             CTTCCCEEEETTTSHHHHHHHHHHHTTTC-CEEEECTTCGGG
T ss_pred             CCCCCeEEEEcCCCHHHHHHHHHHHHcCC-CcEecccccccc
Confidence            45689999999999999999999999999 999998876543

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=97.73  E-value=3.6e-05  Score=55.37  Aligned_cols=71  Identities=8%  Similarity=0.049  Sum_probs=47.8

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEec
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a   88 (278)
                      |||+|.|+ |.+|+.++..|.+.|+ +|.++.|++.............  .........    ...+..+.+|+||.+.
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~----~~~~~~~~~D~iii~v   71 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQGH-EVQGWLRVPQPYCSVNLVETDG--SIFNESLTA----NDPDFLATSDLLLVTL   71 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSSCCSEEEEEEECTTS--CEEEEEEEE----SCHHHHHTCSEEEECS
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCC-ceEEEEcCHHHhhhhccccCCc--ccccccccc----chhhhhcccceEEEee
Confidence            68999999 9999999999999999 9999999887655443221111  111111111    1234456889999764

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.73  E-value=7.1e-06  Score=60.14  Aligned_cols=74  Identities=9%  Similarity=0.044  Sum_probs=54.4

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhh---HHHHhc--CccE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGA---VSRAVE--GCKG   83 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~---~~~~~~--~~d~   83 (278)
                      +.+|||+||+|.+|..+++.....|+ .|++.++++++.+.++++      +.+.+ .|..+++.   +.++-.  ++|+
T Consensus        29 g~~Vlv~ga~g~vG~~~iqlak~~Ga-~Vi~~~~s~~k~~~~~~l------Ga~~v-i~~~~~d~~~~v~~~t~g~g~d~  100 (179)
T d1qora2          29 DEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKA------GAWQV-INYREEDLVERLKEITGGKKVRV  100 (179)
T ss_dssp             TCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHH------TCSEE-EETTTSCHHHHHHHHTTTCCEEE
T ss_pred             CCEEEEEccccccchHHHHHHHHhCC-eEeecccchHHHHHHHhc------CCeEE-EECCCCCHHHHHHHHhCCCCeEE
Confidence            67999999999999999999999999 899999988777666654      22211 35555543   333332  5799


Q ss_pred             EEEeccc
Q 023689           84 VFHVASP   90 (278)
Q Consensus        84 vi~~a~~   90 (278)
                      |+.+.+.
T Consensus       101 v~d~~g~  107 (179)
T d1qora2         101 VYDSVGR  107 (179)
T ss_dssp             EEECSCG
T ss_pred             EEeCccH
Confidence            9998754

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.72  E-value=0.00014  Score=46.71  Aligned_cols=73  Identities=12%  Similarity=0.135  Sum_probs=49.8

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      ++++|+|+|.|. |--|..+++.|.+.|+ +|++.+.+..... ...+..    ...+..+.. +    ...++++|.||
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~-~v~~~D~~~~~~~-~~~~~~----~~~~~~~~~-~----~~~~~~~d~vi   69 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGV-TPRVMDTRMTPPG-LDKLPE----AVERHTGSL-N----DEWLMAADLIV   69 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTC-CCEEEESSSSCTT-GGGSCT----TSCEEESBC-C----HHHHHHCSEEE
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCC-EEEEeeCCcCchh-HHHHhh----ccceeeccc-c----hhhhccCCEEE
Confidence            578899999999 7899999999999999 8888877543221 111111    333444443 2    23456789999


Q ss_pred             Eeccc
Q 023689           86 HVASP   90 (278)
Q Consensus        86 ~~a~~   90 (278)
                      -.-|+
T Consensus        70 ~SPGi   74 (93)
T d2jfga1          70 ASPGI   74 (93)
T ss_dssp             ECTTS
T ss_pred             ECCCC
Confidence            87665

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.71  E-value=0.00011  Score=49.16  Aligned_cols=98  Identities=10%  Similarity=0.114  Sum_probs=64.7

Q ss_pred             ccccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccE
Q 023689            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKG   83 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~   83 (278)
                      |-++++|+|||.|+ |-+|..-++.|++.|+ .|+........  ....+...  .+++++..+..+.+     +++++.
T Consensus         7 ~l~l~~k~vlVvG~-G~va~~ka~~ll~~ga-~v~v~~~~~~~--~~~~~~~~--~~i~~~~~~~~~~d-----l~~~~l   75 (113)
T d1pjqa1           7 FCQLRDRDCLIVGG-GDVAERKARLLLEAGA-RLTVNALTFIP--QFTVWANE--GMLTLVEGPFDETL-----LDSCWL   75 (113)
T ss_dssp             EECCBTCEEEEECC-SHHHHHHHHHHHHTTB-EEEEEESSCCH--HHHHHHTT--TSCEEEESSCCGGG-----GTTCSE
T ss_pred             EEEeCCCEEEEECC-CHHHHHHHHHHHHCCC-eEEEEeccCCh--HHHHHHhc--CCceeeccCCCHHH-----hCCCcE
Confidence            44778999999998 8999999999999999 78777654432  22211111  16777777665432     567788


Q ss_pred             EEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        84 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      |+.+.+.         ...        ...+.+.|++.+  .+|++.+
T Consensus        76 v~~at~d---------~~~--------n~~i~~~a~~~~--ilVNv~D  104 (113)
T d1pjqa1          76 AIAATDD---------DTV--------NQRVSDAAESRR--IFCNVVD  104 (113)
T ss_dssp             EEECCSC---------HHH--------HHHHHHHHHHTT--CEEEETT
T ss_pred             EeecCCC---------HHH--------HHHHHHHHHHcC--CEEEeCC
Confidence            8755321         111        235777888876  4788664

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=97.71  E-value=0.00015  Score=48.23  Aligned_cols=68  Identities=18%  Similarity=0.133  Sum_probs=54.1

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc--CccEEE
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVF   85 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vi   85 (278)
                      ...||.|.|| |.+|+-++....+.|+ ++++++.+++......        .-+++.+|..|.+.+.++..  ++|+|.
T Consensus        10 ~~~kigIlGg-GQL~rMla~aA~~lG~-~v~v~d~~~~~PA~~v--------a~~~i~~~~~d~~~l~~~~~~~~~DviT   79 (111)
T d1kjqa2          10 AATRVMLLGS-GELGKEVAIECQRLGV-EVIAVDRYADAPAMHV--------AHRSHVINMLDGDALRRVVELEKPHYIV   79 (111)
T ss_dssp             TCCEEEEESC-SHHHHHHHHHHHTTTC-EEEEEESSTTCGGGGG--------SSEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CCCEEEEEeC-CHHHHHHHHHHHHCCC-EEEEEcCCCCCchhhc--------CCeEEECCCCCHHHHHHHHHhhCCceEE
Confidence            4568999997 9999999999999999 8888887655322211        34688899999999999875  568885

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.65  E-value=2.3e-05  Score=56.81  Aligned_cols=76  Identities=13%  Similarity=0.071  Sum_probs=51.0

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      ..++|+|||.|+ |+.++.++..|.+.|. .|.+..|+.++.+.+........ .++.  .+..+.     ...++|+||
T Consensus        15 ~~~~k~vlIlGa-GGaarai~~al~~~g~-~i~I~nRt~~ka~~l~~~~~~~~-~~~~--~~~~~~-----~~~~~dliI   84 (170)
T d1nyta1          15 IRPGLRILLIGA-GGASRGVLLPLLSLDC-AVTITNRTVSRAEELAKLFAHTG-SIQA--LSMDEL-----EGHEFDLII   84 (170)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHTGGGS-SEEE--CCSGGG-----TTCCCSEEE
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHhcccce-EEEeccchHHHHHHHHHHHhhcc-cccc--cccccc-----cccccceee
Confidence            346799999998 8899999999999999 79989898766555443211111 2222  222211     125689999


Q ss_pred             EecccC
Q 023689           86 HVASPC   91 (278)
Q Consensus        86 ~~a~~~   91 (278)
                      |+....
T Consensus        85 N~Tp~G   90 (170)
T d1nyta1          85 NATSSG   90 (170)
T ss_dssp             ECCSCG
T ss_pred             cccccC
Confidence            997543

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.65  E-value=0.00013  Score=51.71  Aligned_cols=106  Identities=16%  Similarity=0.012  Sum_probs=64.6

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCC---C---eEEEEecCCCCCcccccC----CCCCCCceEEEEccCCChhhHHHHh
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNY---T---SINATVFPGSDSSHLFAL----PGAGDANLRVFEADVLDSGAVSRAV   78 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~---~---~v~~~~r~~~~~~~~~~~----~~~~~~~v~~~~~Dl~d~~~~~~~~   78 (278)
                      .+||.|+||+|.+|++++-.|.+.+.   .   ++...+.+.. ......+    ..........+  ...  ....+.+
T Consensus         3 p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~-~~~~~~l~~~~~~~~~~~~~~~--~~~--~~~~~~~   77 (154)
T d5mdha1           3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPM-MGVLDGVLMELQDCALPLLKDV--IAT--DKEEIAF   77 (154)
T ss_dssp             CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGG-HHHHHHHHHHHHHTCCTTEEEE--EEE--SCHHHHT
T ss_pred             ceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccc-hhhhhhhhhhhccccccccccc--ccC--ccccccc
Confidence            47999999999999999999876432   1   2232222221 1111110    00000011111  111  2345788


Q ss_pred             cCccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhc
Q 023689           79 EGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF  121 (278)
Q Consensus        79 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~  121 (278)
                      +++|+||-.||.....  .......++.|..-.+.+.+...++
T Consensus        78 ~~~dvVVitag~~~~~--g~sr~dll~~N~~i~k~~~~~i~k~  118 (154)
T d5mdha1          78 KDLDVAILVGSMPRRD--GMERKDLLKANVKIFKCQGAALDKY  118 (154)
T ss_dssp             TTCSEEEECCSCCCCT--TCCTTTTHHHHHHHHHHHHHHHHHH
T ss_pred             CCceEEEEecccCCCC--CCchhHHHHHhHHHHHHHHHHHHhh
Confidence            9999999999875543  2345678999999999999988775

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.63  E-value=7.8e-06  Score=59.16  Aligned_cols=44  Identities=30%  Similarity=0.313  Sum_probs=38.8

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccC
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL   53 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~   53 (278)
                      +..|||+||+|.+|...++.....|+ .|+++++++++.+.+..+
T Consensus        24 ~~~VLV~gaaGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~~~~l   67 (167)
T d1tt7a2          24 KGSVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAADYLKQL   67 (167)
T ss_dssp             GCCEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHHH
T ss_pred             CCEEEEeCCcchHHHHHHHHHHHcCC-ceEEEecCHHHHHHHHhh
Confidence            45799999999999999998888899 899999998887777665

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.56  E-value=5.8e-06  Score=60.69  Aligned_cols=32  Identities=25%  Similarity=0.311  Sum_probs=27.1

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINAT   40 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~   40 (278)
                      |+||.|.||||++|+.|++.|.++..-++..+
T Consensus         1 MikVaIiGATGyvG~eLlrlL~~HP~~ei~~l   32 (179)
T d2g17a1           1 MLNTLIVGASGYAGAELVSYVNRHPHMTITAL   32 (179)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEE
T ss_pred             CcEEEEECcccHHHHHHHHHHHhCCCCceEee
Confidence            68999999999999999999999855355544

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.54  E-value=4.9e-05  Score=54.92  Aligned_cols=76  Identities=11%  Similarity=0.020  Sum_probs=53.4

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEe
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~   87 (278)
                      .+.+|+|+|+ |.+|...++.+...|+ +|+++++++++.+..+++      +...+.-...+.+..++..+++|.++.+
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~a~~l------Ga~~~i~~~~~~~~~~~~~~~~d~vi~~   98 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKM------GADHYIATLEEGDWGEKYFDTFDLIVVC   98 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHH------TCSEEEEGGGTSCHHHHSCSCEEEEEEC
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccc-cccccccchhHHHHhhcc------CCcEEeeccchHHHHHhhhcccceEEEE
Confidence            4679999987 8999999988888899 899999988876666554      2222211122334455556678999998


Q ss_pred             cccC
Q 023689           88 ASPC   91 (278)
Q Consensus        88 a~~~   91 (278)
                      .+..
T Consensus        99 ~~~~  102 (168)
T d1piwa2          99 ASSL  102 (168)
T ss_dssp             CSCS
T ss_pred             ecCC
Confidence            7653

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.52  E-value=0.00016  Score=52.05  Aligned_cols=76  Identities=13%  Similarity=0.023  Sum_probs=51.8

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccC--CChhhHHHHh-----cC
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADV--LDSGAVSRAV-----EG   80 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl--~d~~~~~~~~-----~~   80 (278)
                      .+.+|+|+| +|.+|...+..+...|+ +|+++++++++.+..+++..    ... +..|-  .+.+.+.+.+     .+
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga-~vi~v~~~~~r~~~a~~~ga----~~~-~~~~~~~~~~~~~~~~~~~~~g~g   98 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGA----DVT-LVVDPAKEEESSIIERIRSAIGDL   98 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTC----SEE-EECCTTTSCHHHHHHHHHHHSSSC
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcc-cccccchHHHHHHHHHHcCC----cEE-EeccccccccchhhhhhhcccccC
Confidence            467899997 58999999999999999 89999988776665555421    222 22232  2333333333     25


Q ss_pred             ccEEEEeccc
Q 023689           81 CKGVFHVASP   90 (278)
Q Consensus        81 ~d~vi~~a~~   90 (278)
                      +|+||.+++.
T Consensus        99 ~D~vid~~g~  108 (170)
T d1e3ja2          99 PNVTIDCSGN  108 (170)
T ss_dssp             CSEEEECSCC
T ss_pred             CceeeecCCC
Confidence            8999999764

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.50  E-value=1.8e-05  Score=57.09  Aligned_cols=64  Identities=20%  Similarity=0.205  Sum_probs=44.2

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEe
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~   87 (278)
                      |||.|.|. |.+|+.+++.|.+.|+ +|++.+|+++..+...+.      ++    .|-  .....++++++|+||-+
T Consensus         1 MkI~iIG~-G~mG~~lA~~l~~~g~-~V~~~d~~~~~~~~a~~~------~~----~~~--~~~~~~~~~~~DiIila   64 (165)
T d2f1ka2           1 MKIGVVGL-GLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVER------QL----VDE--AGQDLSLLQTAKIIFLC   64 (165)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHT------TS----CSE--EESCGGGGTTCSEEEEC
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCC-EEEEEECCchHHHHHHHh------hc----cce--eeeeccccccccccccc
Confidence            57999977 9999999999999999 899998876554433332      11    110  01112467899999864

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.50  E-value=4.2e-05  Score=57.06  Aligned_cols=73  Identities=11%  Similarity=0.128  Sum_probs=48.8

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEc-------------cCCChhhHHH
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEA-------------DVLDSGAVSR   76 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~-------------Dl~d~~~~~~   76 (278)
                      |||.|.|. |++|..++..|.+.|+ +|++++.+.+..+.+..-.      ..+.+.             .+.-..++.+
T Consensus         1 MkI~ViGl-G~vGl~~a~~la~~g~-~V~g~D~n~~~i~~ln~g~------~p~~e~~~~~~l~~~~~~~~~~~~~~~~~   72 (202)
T d1mv8a2           1 MRISIFGL-GYVGAVCAGCLSARGH-EVIGVDVSSTKIDLINQGK------SPIVEPGLEALLQQGRQTGRLSGTTDFKK   72 (202)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTC------CSSCCTTHHHHHHHHHHTTCEEEESCHHH
T ss_pred             CEEEEECC-CHhHHHHHHHHHhCCC-cEEEEeCCHHHHHHhcccC------CcccchhhhhhhhhhhcccccccCCCHHH
Confidence            57999966 9999999999999999 8999988665444332210      000111             1112234567


Q ss_pred             HhcCccEEEEeccc
Q 023689           77 AVEGCKGVFHVASP   90 (278)
Q Consensus        77 ~~~~~d~vi~~a~~   90 (278)
                      +++++|+++.+...
T Consensus        73 ~i~~~d~i~i~VpT   86 (202)
T d1mv8a2          73 AVLDSDVSFICVGT   86 (202)
T ss_dssp             HHHTCSEEEECCCC
T ss_pred             HHhhCCEEEEecCc
Confidence            77889999988754

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.49  E-value=1.9e-05  Score=57.64  Aligned_cols=44  Identities=30%  Similarity=0.301  Sum_probs=38.0

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccC
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL   53 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~   53 (278)
                      +.+|||+||+|++|...++.....|+ +|+++++++++.+.++.+
T Consensus        32 ~~~vlV~gasGGVG~~aiQlAk~~Ga-~Via~~~~~~k~~~~~~l   75 (177)
T d1o89a2          32 DGEIVVTGASGGVGSTAVALLHKLGY-QVVAVSGRESTHEYLKSL   75 (177)
T ss_dssp             GCEEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHH
T ss_pred             CCcEEEEEccccchHHHHHHHHHcCC-CeEEEecchhHHHHHHhh
Confidence            34899999999999999999999999 899999988776666554

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.46  E-value=8.4e-05  Score=54.29  Aligned_cols=77  Identities=17%  Similarity=0.052  Sum_probs=50.8

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCC--CCCceEEEEccCCChhhHHHHhcCccEEEEe
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGA--GDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~--~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~   87 (278)
                      |||.|+|+ |.+|..++..|.+.|+ +|.+++|+++..+.+......  ................++.++++++|+||-+
T Consensus         2 k~iaIiGa-G~~G~~~A~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~iii~   79 (184)
T d1bg6a2           2 KTYAVLGL-GNGGHAFAAYLALKGQ-SVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIV   79 (184)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEEC
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEEEEE
Confidence            79999999 9999999999999999 999999976544333221000  0001111222222223578889999999976


Q ss_pred             c
Q 023689           88 A   88 (278)
Q Consensus        88 a   88 (278)
                      .
T Consensus        80 v   80 (184)
T d1bg6a2          80 V   80 (184)
T ss_dssp             S
T ss_pred             E
Confidence            3

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=97.42  E-value=7.5e-05  Score=52.98  Aligned_cols=73  Identities=18%  Similarity=0.273  Sum_probs=55.0

Q ss_pred             eEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCc-ccccCCCCCCCceEEEEccCCChhhHHHH-hcCccEEEEec
Q 023689           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS-HLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFHVA   88 (278)
Q Consensus        11 ~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~-~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~-~~~~d~vi~~a   88 (278)
                      .|+|.|. |-+|+.+++.|.+.|+ .|+++..+++... .......   .++.++.+|.+|++.++++ ++++|.||-+.
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~-~v~vId~d~~~~~~~~~~~~~---~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~~   79 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLG---DNADVIPGDSNDSSVLKKAGIDRCRAILALS   79 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHC---TTCEEEESCTTSHHHHHHHTTTTCSEEEECS
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCC-CEEEEeccchhHHHHHHHhhc---CCcEEEEccCcchHHHHHhccccCCEEEEcc
Confidence            6889988 8999999999999999 7887877654321 1111111   1789999999999988776 67889998663

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.38  E-value=0.00078  Score=45.84  Aligned_cols=72  Identities=14%  Similarity=0.240  Sum_probs=49.3

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEecc
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a~   89 (278)
                      |||.|.|++|-+|+.+.+.+.++|+ ++.+.....               ..              +.++++|+||.+..
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~~~-~l~~~id~~---------------~~--------------~~~~~~DVvIDFS~   50 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEKGH-ELVLKVDVN---------------GV--------------EELDSPDVVIDFSS   50 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEETT---------------EE--------------EECSCCSEEEECSC
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCCC-eEEEEECCC---------------cH--------------HHhccCCEEEEecC
Confidence            5799999999999999999999998 555432111               00              11356899998754


Q ss_pred             cCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEec
Q 023689           90 PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS  130 (278)
Q Consensus        90 ~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~S  130 (278)
                      +          +        ++...++.|.+++. .+|.-+
T Consensus        51 p----------~--------~~~~~l~~~~~~~~-p~ViGT   72 (128)
T d1vm6a3          51 P----------E--------ALPKTVDLCKKYRA-GLVLGT   72 (128)
T ss_dssp             G----------G--------GHHHHHHHHHHHTC-EEEECC
T ss_pred             H----------H--------HHHHHHHHHHhcCC-CEEEEc
Confidence            3          1        25578888888885 455533

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.38  E-value=8.2e-05  Score=53.67  Aligned_cols=74  Identities=12%  Similarity=0.096  Sum_probs=53.9

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEe
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~   87 (278)
                      .+.+|+|.|+ |.+|...++.+...|+ .++++++++++.+..+++      +...+ .|..+.+......+++|++|.+
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga-~~i~~~~~~~~~~~a~~l------Gad~~-i~~~~~~~~~~~~~~~D~vid~  100 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKAL------GADEV-VNSRNADEMAAHLKSFDFILNT  100 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHH------TCSEE-EETTCHHHHHTTTTCEEEEEEC
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccc-cchhhccchhHHHHHhcc------CCcEE-EECchhhHHHHhcCCCceeeee
Confidence            4679999987 8899999999888999 677787776655554444      22211 4566666666666789999999


Q ss_pred             ccc
Q 023689           88 ASP   90 (278)
Q Consensus        88 a~~   90 (278)
                      .+.
T Consensus       101 ~g~  103 (168)
T d1uufa2         101 VAA  103 (168)
T ss_dssp             CSS
T ss_pred             eec
Confidence            864

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=97.36  E-value=3.9e-05  Score=56.28  Aligned_cols=34  Identities=26%  Similarity=0.412  Sum_probs=27.9

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEec
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVF   42 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r   42 (278)
                      ..||-|.||||++|+.|++.|.++.+.++..+..
T Consensus         5 kikVaIlGATGyvG~elirLL~~HP~~ei~~l~S   38 (183)
T d2cvoa1           5 EVRIAVLGASGYTGAEIVRLLANHPQFRIKVMTA   38 (183)
T ss_dssp             CEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEEC
T ss_pred             ccEEEEECcccHHHHHHHHHHHhCCCceEEEEec
Confidence            3589999999999999999999886646655543

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.30  E-value=5.6e-05  Score=54.65  Aligned_cols=75  Identities=16%  Similarity=0.138  Sum_probs=52.1

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCce-EEEEccCCChhhHHHHh-----cCc
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANL-RVFEADVLDSGAVSRAV-----EGC   81 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v-~~~~~Dl~d~~~~~~~~-----~~~   81 (278)
                      .+.+|+|+|++|.+|...+..+...|...|++.++++++.+..+++      +. +.+  |..+.+..++..     +++
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~------Ga~~~i--~~~~~~~~~~~~~~~~~~~~   98 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRA------GADYVI--NASMQDPLAEIRRITESKGV   98 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHH------TCSEEE--ETTTSCHHHHHHHHTTTSCE
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHc------CCceee--ccCCcCHHHHHHHHhhcccc
Confidence            3579999999999999999999888976888888877665555443      22 223  333333333333     258


Q ss_pred             cEEEEeccc
Q 023689           82 KGVFHVASP   90 (278)
Q Consensus        82 d~vi~~a~~   90 (278)
                      |++|.+++.
T Consensus        99 d~vid~~g~  107 (170)
T d1jvba2          99 DAVIDLNNS  107 (170)
T ss_dssp             EEEEESCCC
T ss_pred             hhhhccccc
Confidence            999998764

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=97.29  E-value=0.00011  Score=50.37  Aligned_cols=68  Identities=12%  Similarity=0.081  Sum_probs=52.1

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHH-hcCccEEEEe
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFHV   87 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~-~~~~d~vi~~   87 (278)
                      |.++|.|. |-+|+.+++.|.  |+ .|.++..+++..+.....      ++.++.+|.++++.++++ +++++.++-+
T Consensus         1 kHivI~G~-g~~g~~l~~~L~--~~-~i~vi~~d~~~~~~~~~~------~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~   69 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLRELR--GS-EVFVLAEDENVRKKVLRS------GANFVHGDPTRVSDLEKANVRGARAVIVN   69 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTSC--GG-GEEEEESCTTHHHHHHHT------TCEEEESCTTSHHHHHHTTCTTCSEEEEC
T ss_pred             CEEEEECC-CHHHHHHHHHHc--CC-CCEEEEcchHHHHHHHhc------CccccccccCCHHHHHHhhhhcCcEEEEe
Confidence            46889987 888999999984  55 566677766655444332      789999999999988886 5788888854

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.29  E-value=0.00018  Score=52.41  Aligned_cols=77  Identities=16%  Similarity=0.137  Sum_probs=49.2

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCC--CcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEe
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD--SSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~--~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~   87 (278)
                      |||.|.|+ |-.|..++..|.++|+ +|....|+.+.  .+.+..-.............++.-.+++.++++++|+||.+
T Consensus         1 MkI~ViGa-G~~GtalA~~la~~g~-~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii~a   78 (180)
T d1txga2           1 MIVSILGA-GAMGSALSVPLVDNGN-EVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLG   78 (180)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHHCC-EEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEEC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCC-EEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHHhccchhhcc
Confidence            68999998 9999999999999998 99998874332  11111110000001111112233456788999999999875


Q ss_pred             c
Q 023689           88 A   88 (278)
Q Consensus        88 a   88 (278)
                      .
T Consensus        79 v   79 (180)
T d1txga2          79 V   79 (180)
T ss_dssp             S
T ss_pred             c
Confidence            3

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.28  E-value=0.00021  Score=52.16  Aligned_cols=77  Identities=10%  Similarity=0.051  Sum_probs=51.1

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhH----HHHhc--Cc
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAV----SRAVE--GC   81 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~----~~~~~--~~   81 (278)
                      .+.+|||+|+ |.+|...+..+...|+..|++.++++++.+..+++..    . ..+...=.+..+.    .+...  ++
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa----~-~vi~~~~~~~~~~~~~i~~~~~~~g~  101 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGA----D-LTLNRRETSVEERRKAIMDITHGRGA  101 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTC----S-EEEETTTSCHHHHHHHHHHHTTTSCE
T ss_pred             CCCEEEEECC-Cccchhheecccccccccccccccccccccccccccc----e-EEEeccccchHHHHHHHHHhhCCCCc
Confidence            4689999997 8999999999999998678999888776665555411    1 2222211222222    22222  58


Q ss_pred             cEEEEeccc
Q 023689           82 KGVFHVASP   90 (278)
Q Consensus        82 d~vi~~a~~   90 (278)
                      |+||.++|.
T Consensus       102 Dvvid~vG~  110 (182)
T d1vj0a2         102 DFILEATGD  110 (182)
T ss_dssp             EEEEECSSC
T ss_pred             eEEeecCCc
Confidence            999999765

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.27  E-value=7.1e-05  Score=53.70  Aligned_cols=65  Identities=22%  Similarity=0.289  Sum_probs=49.0

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEec
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a   88 (278)
                      |++|-+.|- |.+|+.+++.|+++|+ .|.+.+|+++..+.+....             .....+..++++.+|+|+-+-
T Consensus         1 M~kIg~IGl-G~MG~~iA~~L~~~g~-~v~~~d~~~~~~~~~~~~~-------------~~~~~~~~e~~~~~diii~~v   65 (162)
T d3cuma2           1 MKQIAFIGL-GHMGAPMATNLLKAGY-LLNVFDLVQSAVDGLVAAG-------------ASAARSARDAVQGADVVISML   65 (162)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHTT-------------CEECSSHHHHHTSCSEEEECC
T ss_pred             CCEEEEEEE-HHHHHHHHHHHHHCCC-eEEEEECchhhhhhhhhhh-------------ccccchhhhhccccCeeeecc
Confidence            578999966 9999999999999999 9999998776554443321             111234677888999988764

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=97.22  E-value=0.00023  Score=51.60  Aligned_cols=78  Identities=15%  Similarity=0.074  Sum_probs=51.3

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCCh-hhHHHHh--cCccEE
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS-GAVSRAV--EGCKGV   84 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~-~~~~~~~--~~~d~v   84 (278)
                      .+.+|+|.|+ |++|...+.++...|..+|++.++++++.+...++..    ...+...|-.+. +...+..  .++|++
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga----~~~i~~~~~~~~~~~~~~~~~~~G~D~v  102 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGA----TECVNPQDYKKPIQEVLTEMSNGGVDFS  102 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTC----SEEECGGGCSSCHHHHHHHHTTSCBSEE
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCC----eeEEecCCchhHHHHHHHHHhcCCCCEE
Confidence            4679999999 6699999999999997799999988877666655421    111111222221 2222222  268999


Q ss_pred             EEeccc
Q 023689           85 FHVASP   90 (278)
Q Consensus        85 i~~a~~   90 (278)
                      |.+.|.
T Consensus       103 id~~G~  108 (176)
T d2jhfa2         103 FEVIGR  108 (176)
T ss_dssp             EECSCC
T ss_pred             EecCCc
Confidence            998765

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=97.12  E-value=0.00047  Score=48.61  Aligned_cols=64  Identities=19%  Similarity=0.115  Sum_probs=44.6

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEec
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a   88 (278)
                      |||-|+|. |.+|+.+++.|.++|+ +|+...++++........      +     ..+.  ++..++++.+|+||-+.
T Consensus         1 MkIgiIG~-G~mG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~------~-----~~~~--~~~~e~~~~~diIi~~v   64 (152)
T d1i36a2           1 LRVGFIGF-GEVAQTLASRLRSRGV-EVVTSLEGRSPSTIERAR------T-----VGVT--ETSEEDVYSCPVVISAV   64 (152)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTC-EEEECCTTCCHHHHHHHH------H-----HTCE--ECCHHHHHTSSEEEECS
T ss_pred             CEEEEEcH-HHHHHHHHHHHHHCCC-eEEEEcCchhHHHHHhhh------c-----cccc--ccHHHHHhhcCeEEEEe
Confidence            57888866 9999999999999999 888777665543322211      1     1111  23567889999999773

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.12  E-value=0.0002  Score=52.48  Aligned_cols=73  Identities=15%  Similarity=0.075  Sum_probs=46.9

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc-cCCCCCCCceEEEEccCCChh---hHHHHh-cCccEE
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSG---AVSRAV-EGCKGV   84 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~---~~~~~~-~~~d~v   84 (278)
                      .+|||+||+|.+|...++.....|++.|++.+++++....+. .+.     .-..  .|..+++   .++++. +++|+|
T Consensus        32 etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~g-----ad~v--i~~~~~~~~~~~~~~~~~GvDvv  104 (187)
T d1vj1a2          32 QTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELG-----FDAA--VNYKTGNVAEQLREACPGGVDVY  104 (187)
T ss_dssp             CEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSC-----CSEE--EETTSSCHHHHHHHHCTTCEEEE
T ss_pred             CEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhccc-----ceEE--eeccchhHHHHHHHHhccCceEE
Confidence            689999999999999999998899856666666554433332 221     1112  3444432   233332 269999


Q ss_pred             EEecc
Q 023689           85 FHVAS   89 (278)
Q Consensus        85 i~~a~   89 (278)
                      |.+.|
T Consensus       105 ~D~vG  109 (187)
T d1vj1a2         105 FDNVG  109 (187)
T ss_dssp             EESSC
T ss_pred             EecCC
Confidence            99865

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.10  E-value=0.0001  Score=53.14  Aligned_cols=69  Identities=14%  Similarity=0.133  Sum_probs=48.2

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEe
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~   87 (278)
                      ++|+|+|.|+ |+.|++++..|.+.|..+|.+..|+.++.+.+....     +...+. +..        ..++|+|||+
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~-----~~~~~~-~~~--------~~~~DliINa   80 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY-----GYAYIN-SLE--------NQQADILVNV   80 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH-----TCEEES-CCT--------TCCCSEEEEC
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhh-----hhhhhh-ccc--------ccchhhheec
Confidence            4689999988 999999999999999878888888876655544321     111111 111        2468999998


Q ss_pred             cccC
Q 023689           88 ASPC   91 (278)
Q Consensus        88 a~~~   91 (278)
                      ...+
T Consensus        81 TpiG   84 (167)
T d1npya1          81 TSIG   84 (167)
T ss_dssp             SSTT
T ss_pred             cccC
Confidence            6543

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.06  E-value=0.00024  Score=51.43  Aligned_cols=75  Identities=11%  Similarity=0.024  Sum_probs=49.3

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCC-ChhhHHHHh-----cCc
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVL-DSGAVSRAV-----EGC   81 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~-d~~~~~~~~-----~~~   81 (278)
                      .+.+|||.|+ |++|...+..+...|...|++.++++++.+..+++      +...+. |.. +.+.+.+.+     .++
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~l------Ga~~~i-~~~~~~~~~~~~~~~~~~~g~   99 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEF------GATECI-NPQDFSKPIQEVLIEMTDGGV   99 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHH------TCSEEE-CGGGCSSCHHHHHHHHTTSCB
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHh------CCcEEE-eCCchhhHHHHHHHHHcCCCC
Confidence            4679999998 57899999999889986788887777666555554      222221 221 122233332     368


Q ss_pred             cEEEEeccc
Q 023689           82 KGVFHVASP   90 (278)
Q Consensus        82 d~vi~~a~~   90 (278)
                      |+||.+.|.
T Consensus       100 D~vid~~G~  108 (176)
T d2fzwa2         100 DYSFECIGN  108 (176)
T ss_dssp             SEEEECSCC
T ss_pred             cEeeecCCC
Confidence            999998764

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.05  E-value=0.00063  Score=48.90  Aligned_cols=76  Identities=17%  Similarity=0.122  Sum_probs=53.9

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCce-EEEEccCCChhhHHHHhc-----Cc
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANL-RVFEADVLDSGAVSRAVE-----GC   81 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v-~~~~~Dl~d~~~~~~~~~-----~~   81 (278)
                      .+.+|+|+|+ |.+|...+..+...|+.+|++.++++++.+..+++      +. +.+..+-.+.....+.++     ++
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~------Ga~~~~~~~~~~~~~~~~~~~~~~g~g~   98 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEI------GADLVLQISKESPQEIARKVEGQLGCKP   98 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT------TCSEEEECSSCCHHHHHHHHHHHHTSCC
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHh------CCcccccccccccccccccccccCCCCc
Confidence            3568999987 99999999999999987799888887766655554      22 233333344444444432     58


Q ss_pred             cEEEEeccc
Q 023689           82 KGVFHVASP   90 (278)
Q Consensus        82 d~vi~~a~~   90 (278)
                      |+||.++|.
T Consensus        99 Dvvid~~G~  107 (171)
T d1pl8a2          99 EVTIECTGA  107 (171)
T ss_dssp             SEEEECSCC
T ss_pred             eEEEeccCC
Confidence            999998764

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=97.05  E-value=0.00015  Score=52.37  Aligned_cols=42  Identities=21%  Similarity=0.329  Sum_probs=33.5

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCC-CeEEEEecCCCCCcccc
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLF   51 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~~~~~~~   51 (278)
                      ||+|+|+|. |.+|..+++.|.+.|+ .+|++.+++++..+...
T Consensus         1 Mk~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~   43 (171)
T d2g5ca2           1 MQNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV   43 (171)
T ss_dssp             CCEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH
T ss_pred             CCEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHH
Confidence            678999986 9999999999999986 36888888765544433

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=97.04  E-value=0.0011  Score=48.15  Aligned_cols=63  Identities=17%  Similarity=0.148  Sum_probs=48.8

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      .+.+|++.|.|. |-||+.+++.|..-|. +|++.++.+.....                   .-.+++.++++.+|+|+
T Consensus        39 ~l~gk~vgIiG~-G~IG~~va~~l~~~g~-~v~~~d~~~~~~~~-------------------~~~~~l~ell~~sDiv~   97 (181)
T d1qp8a1          39 LIQGEKVAVLGL-GEIGTRVGKILAALGA-QVRGFSRTPKEGPW-------------------RFTNSLEEALREARAAV   97 (181)
T ss_dssp             CCTTCEEEEESC-STHHHHHHHHHHHTTC-EEEEECSSCCCSSS-------------------CCBSCSHHHHTTCSEEE
T ss_pred             cccCceEEEecc-ccccccceeeeecccc-ccccccccccccce-------------------eeeechhhhhhccchhh
Confidence            467899999988 8899999999999999 99999876542211                   11235788999999998


Q ss_pred             Eecc
Q 023689           86 HVAS   89 (278)
Q Consensus        86 ~~a~   89 (278)
                      .+..
T Consensus        98 ~~~p  101 (181)
T d1qp8a1          98 CALP  101 (181)
T ss_dssp             ECCC
T ss_pred             cccc
Confidence            7653

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=97.01  E-value=0.00018  Score=52.12  Aligned_cols=75  Identities=15%  Similarity=0.069  Sum_probs=49.7

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHH---HHhc-CccE
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVS---RAVE-GCKG   83 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~---~~~~-~~d~   83 (278)
                      .+.+|+|.|+ |.+|...+..+...|+++|++.++++.+.+..+++.     -.+++  |..+.+..+   +... ++|+
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~G-----a~~~i--~~~~~~~~~~i~~~t~gg~D~   99 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLG-----ATHVI--NSKTQDPVAAIKEITDGGVNF   99 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHT-----CSEEE--ETTTSCHHHHHHHHTTSCEEE
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHHHcC-----CeEEE--eCCCcCHHHHHHHHcCCCCcE
Confidence            3578999997 999999999888889866777777665555554441     12333  344433333   3322 5899


Q ss_pred             EEEeccc
Q 023689           84 VFHVASP   90 (278)
Q Consensus        84 vi~~a~~   90 (278)
                      ||.+.|.
T Consensus       100 vid~~G~  106 (174)
T d1f8fa2         100 ALESTGS  106 (174)
T ss_dssp             EEECSCC
T ss_pred             EEEcCCc
Confidence            9999764

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.01  E-value=0.00012  Score=52.33  Aligned_cols=64  Identities=19%  Similarity=0.281  Sum_probs=48.4

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEec
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a   88 (278)
                      |||-|.|- |.+|+.+++.|++.|+ .|++.+|+++..+.+...      ....       .++..++++++|+||-+-
T Consensus         1 MkIgiIGl-G~MG~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~------~~~~-------~~~~~e~~~~~d~ii~~v   64 (161)
T d1vpda2           1 MKVGFIGL-GIMGKPMSKNLLKAGY-SLVVSDRNPEAIADVIAA------GAET-------ASTAKAIAEQCDVIITML   64 (161)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHT------TCEE-------CSSHHHHHHHCSEEEECC
T ss_pred             CEEEEEeh-hHHHHHHHHHHHHCCC-eEEEEeCCcchhHHHHHh------hhhh-------cccHHHHHhCCCeEEEEc
Confidence            57899976 9999999999999999 899999887665554432      2211       134677888899998763

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=97.00  E-value=0.00089  Score=47.24  Aligned_cols=31  Identities=32%  Similarity=0.495  Sum_probs=24.5

Q ss_pred             eEEEeCcchhhHHHHHHHHHHCCC--CeEEEEe
Q 023689           11 TVCVTGANGFIGTWLVKTLLDNNY--TSINATV   41 (278)
Q Consensus        11 ~vlItGatG~iG~~l~~~L~~~g~--~~v~~~~   41 (278)
                      ||.|.||||++|++|++.|.++.+  .++....
T Consensus         3 kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~   35 (154)
T d2gz1a1           3 TVAVVGATGAVGAQMIKMLEESTLPIDKIRYLA   35 (154)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHcCCCCceEEEEec
Confidence            799999999999999999988753  3444443

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=97.00  E-value=0.0003  Score=50.17  Aligned_cols=96  Identities=25%  Similarity=0.362  Sum_probs=56.6

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHC-CCCeEEEE-ecCCCCC--cccccCCCCCCCceEEEEccCCChhhHHHHhcCccEE
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDN-NYTSINAT-VFPGSDS--SHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~-g~~~v~~~-~r~~~~~--~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~v   84 (278)
                      .+||.|.|++|-+|+.+++.+.+. +. ++.+. .|.....  .....+.+...       .++.-.+++.+.++.+|+|
T Consensus         4 ~ikI~i~Ga~GrMG~~i~~~i~~~~~~-~lv~~~~~~~~~~~g~d~~~~~~~~~-------~~~~~~~~~~~~~~~~DVi   75 (162)
T d1diha1           4 NIRVAIAGAGGRMGRQLIQAALALEGV-QLGAALEREGSSLLGSDAGELAGAGK-------TGVTVQSSLDAVKDDFDVF   75 (162)
T ss_dssp             BEEEEETTTTSHHHHHHHHHHHHSTTE-ECCCEECCTTCTTCSCCTTCSSSSSC-------CSCCEESCSTTTTTSCSEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCC-EEEEEEecccchhccchhhhhhcccc-------CCceeeccHHHHhcccceE
Confidence            468999999999999999998886 55 44443 3432211  11111111111       1111122344566789999


Q ss_pred             EEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      |.+..+          +        ++...++.|.++++ .+|.=+|
T Consensus        76 IDFs~p----------~--------~~~~~~~~a~~~~~-~~ViGTT  103 (162)
T d1diha1          76 IDFTRP----------E--------GTLNHLAFCRQHGK-GMVIGTT  103 (162)
T ss_dssp             EECSCH----------H--------HHHHHHHHHHHTTC-EEEECCC
T ss_pred             EEeccH----------H--------HHHHHHHHHHhccc-eeEEecC
Confidence            987432          1        25578888988884 4665443

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=96.99  E-value=0.00014  Score=51.47  Aligned_cols=65  Identities=11%  Similarity=0.023  Sum_probs=46.6

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEec
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a   88 (278)
                      |||.+.|+ |-+|+++++.|.+.|+ ++++..|++++.+.+.+..     ++       .-..+.+++++++|+||-+.
T Consensus         1 MkIg~IG~-G~mG~al~~~l~~~~~-~i~v~~r~~~~~~~l~~~~-----g~-------~~~~~~~~~~~~~dvIilav   65 (152)
T d2ahra2           1 MKIGIIGV-GKMASAIIKGLKQTPH-ELIISGSSLERSKEIAEQL-----AL-------PYAMSHQDLIDQVDLVILGI   65 (152)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTTSSC-EEEEECSSHHHHHHHHHHH-----TC-------CBCSSHHHHHHTCSEEEECS
T ss_pred             CEEEEEec-cHHHHHHHHHHHhCCC-eEEEEcChHHhHHhhcccc-----ce-------eeechhhhhhhccceeeeec
Confidence            57889976 9999999999999998 8988888766544442211     11       11124677788999998663

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=96.98  E-value=6.8e-05  Score=55.20  Aligned_cols=76  Identities=14%  Similarity=0.120  Sum_probs=49.7

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCC---CCCCCceEEEEccCCChhhHHHHhcCccEE
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP---GAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~---~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~v   84 (278)
                      .|+||.|.|| |-.|.+++..|.++|+ +|.+..|+++..+.+..-.   ...+ ++.+ .-++.-..++.++++++|+|
T Consensus         6 ~m~KI~ViGa-G~wGtAlA~~La~~g~-~V~l~~r~~~~~~~i~~~~~n~~yl~-~~~l-~~~i~~t~~l~~a~~~ad~i   81 (189)
T d1n1ea2           6 YLNKAVVFGS-GAFGTALAMVLSKKCR-EVCVWHMNEEEVRLVNEKRENVLFLK-GVQL-ASNITFTSDVEKAYNGAEII   81 (189)
T ss_dssp             CEEEEEEECC-SHHHHHHHHHHHTTEE-EEEEECSCHHHHHHHHHHTBCTTTST-TCBC-CTTEEEESCHHHHHTTCSCE
T ss_pred             eeceEEEECC-CHHHHHHHHHHHHcCC-eEEEEEecHHHHHHHhhccccccccc-cccc-ccccccchhhhhccCCCCEE
Confidence            4678999998 9999999999999998 9999998765433221100   0000 1110 11222224578889999999


Q ss_pred             EEe
Q 023689           85 FHV   87 (278)
Q Consensus        85 i~~   87 (278)
                      |.+
T Consensus        82 iia   84 (189)
T d1n1ea2          82 LFV   84 (189)
T ss_dssp             EEC
T ss_pred             EEc
Confidence            875

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=96.93  E-value=0.00017  Score=52.26  Aligned_cols=74  Identities=12%  Similarity=0.024  Sum_probs=50.8

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCce-EEEEccCCCh---hhHHHHhc--Cc
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANL-RVFEADVLDS---GAVSRAVE--GC   81 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v-~~~~~Dl~d~---~~~~~~~~--~~   81 (278)
                      .+.+|+|.|+ |.+|...++.+...|+..|+++++++.+.+..+++      +. +.  .|..+.   +.+.+...  ++
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~l------Ga~~~--i~~~~~~~~~~v~~~t~g~G~   97 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFY------GATDI--LNYKNGHIEDQVMKLTNGKGV   97 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHH------TCSEE--ECGGGSCHHHHHHHHTTTSCE
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHHhh------Ccccc--ccccchhHHHHHHHHhhccCc
Confidence            3678999987 99999999998888986788888876655554443      22 22  233333   33444443  48


Q ss_pred             cEEEEeccc
Q 023689           82 KGVFHVASP   90 (278)
Q Consensus        82 d~vi~~a~~   90 (278)
                      |+||.+++.
T Consensus        98 D~vid~~g~  106 (174)
T d1jqba2          98 DRVIMAGGG  106 (174)
T ss_dssp             EEEEECSSC
T ss_pred             ceEEEccCC
Confidence            999999875

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=96.92  E-value=0.00026  Score=51.06  Aligned_cols=76  Identities=17%  Similarity=0.116  Sum_probs=50.7

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      ..++|+|+|.|+ |+.++.++..|.+.+. +|++..|+.++.+.+........ ++..+..|-.       .+..+|+||
T Consensus        15 ~~~~k~vlIlGa-GGaarai~~aL~~~~~-~i~I~nR~~~~a~~l~~~~~~~~-~~~~~~~~~~-------~~~~~diiI   84 (171)
T d1p77a1          15 LRPNQHVLILGA-GGATKGVLLPLLQAQQ-NIVLANRTFSKTKELAERFQPYG-NIQAVSMDSI-------PLQTYDLVI   84 (171)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGS-CEEEEEGGGC-------CCSCCSEEE
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHcccCc-eeeeccchHHHHHHHHHHHhhcc-ccchhhhccc-------cccccceee
Confidence            356789999988 8889999999998665 89999998766554432111111 3333333321       246789999


Q ss_pred             EecccC
Q 023689           86 HVASPC   91 (278)
Q Consensus        86 ~~a~~~   91 (278)
                      ++....
T Consensus        85 N~tp~g   90 (171)
T d1p77a1          85 NATSAG   90 (171)
T ss_dssp             ECCCC-
T ss_pred             eccccc
Confidence            997653

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=96.91  E-value=0.0033  Score=40.25  Aligned_cols=68  Identities=16%  Similarity=0.270  Sum_probs=45.8

Q ss_pred             CceEEEeCcchhhH-HHHHHHHHHCCCCeEEEEecCCCC-CcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689            9 EETVCVTGANGFIG-TWLVKTLLDNNYTSINATVFPGSD-SSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus         9 ~~~vlItGatG~iG-~~l~~~L~~~g~~~v~~~~r~~~~-~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      .|+|.+.|. |++| +.||+.|.++|+ .|.+.++.... .+.+.+.      ++.+..++-.  +    .++++|.||.
T Consensus         8 ~~~ihfiGi-gG~GMs~LA~~L~~~G~-~VsGSD~~~~~~~~~L~~~------Gi~v~~g~~~--~----~i~~~d~vV~   73 (96)
T d1p3da1           8 VQQIHFIGI-GGAGMSGIAEILLNEGY-QISGSDIADGVVTQRLAQA------GAKIYIGHAE--E----HIEGASVVVV   73 (96)
T ss_dssp             CCEEEEETT-TSTTHHHHHHHHHHHTC-EEEEEESCCSHHHHHHHHT------TCEEEESCCG--G----GGTTCSEEEE
T ss_pred             CCEEEEEEE-CHHHHHHHHHHHHhCCC-EEEEEeCCCChhhhHHHHC------CCeEEECCcc--c----cCCCCCEEEE
Confidence            478999987 5566 778999999999 99999876432 2222222      5555444332  2    2467899998


Q ss_pred             eccc
Q 023689           87 VASP   90 (278)
Q Consensus        87 ~a~~   90 (278)
                      ..++
T Consensus        74 S~AI   77 (96)
T d1p3da1          74 SSAI   77 (96)
T ss_dssp             CTTS
T ss_pred             CCCc
Confidence            8776

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.86  E-value=0.00077  Score=48.63  Aligned_cols=77  Identities=19%  Similarity=0.142  Sum_probs=50.8

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCCh--hhHHHHh--cCccE
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS--GAVSRAV--EGCKG   83 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~--~~~~~~~--~~~d~   83 (278)
                      .+.+|+|+|+ |.||...+..+...|+..|++.++++++.+..+++.     ..+.+...-.|.  ..+.+..  .++|+
T Consensus        28 ~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~G-----a~~~i~~~~~~~~~~~~~~~~~~~G~d~  101 (174)
T d1e3ia2          28 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALG-----ATDCLNPRELDKPVQDVITELTAGGVDY  101 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTT-----CSEEECGGGCSSCHHHHHHHHHTSCBSE
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHhC-----CCcccCCccchhhhhhhHhhhhcCCCcE
Confidence            3579999986 999999999999999877888888777665555541     112222222221  2222222  36899


Q ss_pred             EEEeccc
Q 023689           84 VFHVASP   90 (278)
Q Consensus        84 vi~~a~~   90 (278)
                      +|.++|.
T Consensus       102 vie~~G~  108 (174)
T d1e3ia2         102 SLDCAGT  108 (174)
T ss_dssp             EEESSCC
T ss_pred             EEEeccc
Confidence            9999875

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=96.84  E-value=0.0039  Score=42.34  Aligned_cols=89  Identities=16%  Similarity=0.142  Sum_probs=57.9

Q ss_pred             cCCceEEEeCcc---hhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccE
Q 023689            7 KEEETVCVTGAN---GFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKG   83 (278)
Q Consensus         7 ~~~~~vlItGat---G~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~   83 (278)
                      ++.++|.|.|+|   +..|..+.+.|.+.|...|+.+.-+.+   .+.        +       +.-..++.++-..+|.
T Consensus         6 f~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~---~i~--------G-------~~~y~sl~dlp~~vDl   67 (129)
T d2csua1           6 FNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEE---EVQ--------G-------VKAYKSVKDIPDEIDL   67 (129)
T ss_dssp             TSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCS---EET--------T-------EECBSSTTSCSSCCSE
T ss_pred             CCCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCcc---ccC--------C-------eEeecchhhcCCCCce
Confidence            456899999999   999999999987766227776633221   111        1       1122233333456888


Q ss_pred             EEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        84 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      ++-+...          +.        +..+++.|.+.|++.++.+|+
T Consensus        68 vvi~vp~----------~~--------~~~~~~~~~~~g~~~~vi~s~   97 (129)
T d2csua1          68 AIIVVPK----------RF--------VKDTLIQCGEKGVKGVVIITA   97 (129)
T ss_dssp             EEECSCH----------HH--------HHHHHHHHHHHTCCEEEECCC
T ss_pred             EEEecCh----------HH--------hHHHHHHHHHcCCCEEEEecc
Confidence            8765321          12        456888888999999888886

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.75  E-value=0.00084  Score=48.42  Aligned_cols=77  Identities=14%  Similarity=0.024  Sum_probs=51.4

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCC--hhhHHHHh--cCccE
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD--SGAVSRAV--EGCKG   83 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d--~~~~~~~~--~~~d~   83 (278)
                      .+.+|+|.|+ |.+|...+..+...|+..|++.++++++.+..+++.     ..+.+...-.|  .+...+..  .++|+
T Consensus        27 ~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lG-----a~~~i~~~~~d~~~~~~~~~~~~~G~d~  100 (174)
T d1p0fa2          27 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELG-----ATECLNPKDYDKPIYEVICEKTNGGVDY  100 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTT-----CSEEECGGGCSSCHHHHHHHHTTSCBSE
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHHcC-----CcEEEcCCCchhHHHHHHHHhcCCCCcE
Confidence            3679999986 999999999999999878998888877766666552     11222211122  12222222  26899


Q ss_pred             EEEeccc
Q 023689           84 VFHVASP   90 (278)
Q Consensus        84 vi~~a~~   90 (278)
                      +|.+++.
T Consensus       101 vid~~g~  107 (174)
T d1p0fa2         101 AVECAGR  107 (174)
T ss_dssp             EEECSCC
T ss_pred             EEEcCCC
Confidence            9998764

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=96.72  E-value=0.00089  Score=49.26  Aligned_cols=66  Identities=11%  Similarity=0.067  Sum_probs=48.1

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      ++.+|+|.|.|- |-||+.+++.|..-|. +|++.++.......                .+....+++.++++.+|+|+
T Consensus        40 el~gk~vgIiG~-G~IG~~va~~l~~fg~-~V~~~d~~~~~~~~----------------~~~~~~~~l~~~l~~sDii~  101 (197)
T d1j4aa1          40 EVRDQVVGVVGT-GHIGQVFMQIMEGFGA-KVITYDIFRNPELE----------------KKGYYVDSLDDLYKQADVIS  101 (197)
T ss_dssp             CGGGSEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSSCCHHHH----------------HTTCBCSCHHHHHHHCSEEE
T ss_pred             cccCCeEEEecc-cccchhHHHhHhhhcc-cccccCcccccccc----------------cceeeecccccccccccccc
Confidence            467899999977 9999999999998999 89888765432111                11122346888888999887


Q ss_pred             Eecc
Q 023689           86 HVAS   89 (278)
Q Consensus        86 ~~a~   89 (278)
                      .+..
T Consensus       102 ~~~p  105 (197)
T d1j4aa1         102 LHVP  105 (197)
T ss_dssp             ECSC
T ss_pred             ccCC
Confidence            6643

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.69  E-value=0.00093  Score=48.28  Aligned_cols=77  Identities=14%  Similarity=0.111  Sum_probs=52.3

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEE-ccCCC-hhhHHHHh--cCccE
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFE-ADVLD-SGAVSRAV--EGCKG   83 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~-~Dl~d-~~~~~~~~--~~~d~   83 (278)
                      .+.+|+|+|+ |.+|...+..+...|+.+|+++++++++.+..+++..    . +.+. -|-.+ .+.+.+..  .++|+
T Consensus        29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA----~-~~in~~~~~~~~~~~~~~~~g~G~d~  102 (176)
T d1d1ta2          29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGA----T-ECISPKDSTKPISEVLSEMTGNNVGY  102 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTC----S-EEECGGGCSSCHHHHHHHHHTSCCCE
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCC----c-EEECccccchHHHHHHHHhccccceE
Confidence            4678999987 9999999999999997689999998877666555421    1 1221 22221 12233333  36899


Q ss_pred             EEEeccc
Q 023689           84 VFHVASP   90 (278)
Q Consensus        84 vi~~a~~   90 (278)
                      +|.+.+.
T Consensus       103 vi~~~g~  109 (176)
T d1d1ta2         103 TFEVIGH  109 (176)
T ss_dssp             EEECSCC
T ss_pred             EEEeCCc
Confidence            9998765

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=96.68  E-value=0.0021  Score=46.12  Aligned_cols=75  Identities=17%  Similarity=0.067  Sum_probs=56.5

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccC---------------------
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADV---------------------   68 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl---------------------   68 (278)
                      -+|+|.|| |-.|..-++.....|. .|.+++.+....+.++.+.      -.++..+.                     
T Consensus        30 a~VvViGa-GvaG~~Aa~~A~~lGA-~V~v~D~~~~~~~~l~~l~------~~~i~~~~~~~~~~~~~~gyA~~~s~~~~  101 (183)
T d1l7da1          30 ARVLVFGV-GVAGLQAIATAKRLGA-VVMATDVRAATKEQVESLG------GKFITVDDEAMKTAETAGGYAKEMGEEFR  101 (183)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHHHTT------CEECCC-----------------------
T ss_pred             cEEEEEcC-cHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhh------cceEEEeccccccccccccchhhcCHHHH
Confidence            48999999 9999999999999999 9999999888877776652      22322211                     


Q ss_pred             -CChhhHHHHhcCccEEEEecccCC
Q 023689           69 -LDSGAVSRAVEGCKGVFHVASPCT   92 (278)
Q Consensus        69 -~d~~~~~~~~~~~d~vi~~a~~~~   92 (278)
                       ...+.+.+.++++|+||-.+-...
T Consensus       102 ~~~~~~l~~~l~~aDlVI~talipG  126 (183)
T d1l7da1         102 KKQAEAVLKELVKTDIAITTALIPG  126 (183)
T ss_dssp             CCHHHHHHHHHTTCSEEEECCCCTT
T ss_pred             HHHHHHHHHHHHhhhhheeeeecCC
Confidence             123456777889999998886644

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=96.57  E-value=0.00046  Score=48.98  Aligned_cols=76  Identities=17%  Similarity=0.097  Sum_probs=58.3

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEec
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a   88 (278)
                      .-+|+|.|+ |-.|..-++.....|. .|.+++.+.+..+.++.....   .++   .-..+.+.+.+.++.+|+||..+
T Consensus        32 pa~V~ViGa-GvaG~~A~~~A~~lGA-~V~~~D~~~~~l~~l~~~~~~---~~~---~~~~~~~~l~~~~~~aDivI~aa  103 (168)
T d1pjca1          32 PGKVVILGG-GVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGS---RVE---LLYSNSAEIETAVAEADLLIGAV  103 (168)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGG---GSE---EEECCHHHHHHHHHTCSEEEECC
T ss_pred             CcEEEEECC-ChHHHHHHHHHhhCCC-EEEEEeCcHHHHHHHHHhhcc---cce---eehhhhhhHHHhhccCcEEEEee
Confidence            358999998 9999999999999999 999999877665554432111   233   23456778999999999999998


Q ss_pred             ccCC
Q 023689           89 SPCT   92 (278)
Q Consensus        89 ~~~~   92 (278)
                      -+..
T Consensus       104 lipG  107 (168)
T d1pjca1         104 LVPG  107 (168)
T ss_dssp             CCTT
T ss_pred             ecCC
Confidence            6544

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=96.51  E-value=0.0015  Score=47.83  Aligned_cols=68  Identities=12%  Similarity=-0.012  Sum_probs=48.7

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      ++.+|++.|.|. |-||+.+++.|..-|. +|++.++.........              .++...+++.++++.+|+|+
T Consensus        46 eL~gktvgIiG~-G~IG~~va~~l~~fg~-~v~~~d~~~~~~~~~~--------------~~~~~~~~l~~ll~~sD~i~  109 (193)
T d1mx3a1          46 RIRGETLGIIGL-GRVGQAVALRAKAFGF-NVLFYDPYLSDGVERA--------------LGLQRVSTLQDLLFHSDCVT  109 (193)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTC-EEEEECTTSCTTHHHH--------------HTCEECSSHHHHHHHCSEEE
T ss_pred             eeeCceEEEecc-ccccccceeeeecccc-ceeeccCcccccchhh--------------hccccccchhhccccCCEEE
Confidence            467899999977 9999999999999999 8988877544321111              11222346788888889886


Q ss_pred             Eecc
Q 023689           86 HVAS   89 (278)
Q Consensus        86 ~~a~   89 (278)
                      .+..
T Consensus       110 ~~~p  113 (193)
T d1mx3a1         110 LHCG  113 (193)
T ss_dssp             ECCC
T ss_pred             Eeec
Confidence            6543

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.45  E-value=0.0019  Score=46.34  Aligned_cols=77  Identities=16%  Similarity=0.059  Sum_probs=49.6

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc--CccEEE
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVF   85 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vi   85 (278)
                      .+.+|+|.|+ |.+|...+..+...|...|++.++++++.+..+++.     ..+.+..+=.+.+.+.+...  ++|+||
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~g-----a~~~i~~~~~~~~~~~~~~~~~g~d~vi  105 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLG-----ADHVVDARRDPVKQVMELTRGRGVNVAM  105 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTT-----CSEEEETTSCHHHHHHHHTTTCCEEEEE
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhhcc-----cceeecCcccHHHHHHHhhCCCCceEEE
Confidence            3578999986 999999999888888767777777776555555442     22333322112222333322  589999


Q ss_pred             Eeccc
Q 023689           86 HVASP   90 (278)
Q Consensus        86 ~~a~~   90 (278)
                      .+++.
T Consensus       106 d~~g~  110 (172)
T d1h2ba2         106 DFVGS  110 (172)
T ss_dssp             ESSCC
T ss_pred             EecCc
Confidence            99764

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.45  E-value=0.018  Score=39.11  Aligned_cols=71  Identities=25%  Similarity=0.328  Sum_probs=46.6

Q ss_pred             eEEEeCcchhhHHHHHHHHHHC-CCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHH-hcCccEEEEec
Q 023689           11 TVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFHVA   88 (278)
Q Consensus        11 ~vlItGatG~iG~~l~~~L~~~-g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~-~~~~d~vi~~a   88 (278)
                      ||.|+|++|-+|+.+++.+.+. ++ ++.+..-..                         +.  +... ..++|+||.+.
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~-~l~~~~d~~-------------------------~~--~~~~~~~~~DvvIDFS   52 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDL-TLSAELDAG-------------------------DP--LSLLTDGNTEVVIDFT   52 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTS-EEEEEECTT-------------------------CC--THHHHTTTCSEEEECC
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCC-EEEEEEecC-------------------------Cc--hhhhccccCCEEEEcc
Confidence            6899999999999999988775 45 555432111                         11  1111 24689999885


Q ss_pred             ccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEE
Q 023689           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVV  128 (278)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~  128 (278)
                      .+.                  ++...++.|.+.++. +|.
T Consensus        53 ~p~------------------~~~~~~~~~~~~~~~-~Vi   73 (135)
T d1yl7a1          53 HPD------------------VVMGNLEFLIDNGIH-AVV   73 (135)
T ss_dssp             CTT------------------THHHHHHHHHHTTCE-EEE
T ss_pred             cHH------------------HHHHHHHHHHhcCCC-EEE
Confidence            431                  155688888888853 554

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.43  E-value=0.0054  Score=43.63  Aligned_cols=82  Identities=7%  Similarity=-0.011  Sum_probs=52.8

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccC--CChhhHHHHhcCccE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADV--LDSGAVSRAVEGCKG   83 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl--~d~~~~~~~~~~~d~   83 (278)
                      +++||+++|.|-|.-+|+.|+..|+++|. .|.....+.... ........   -......|+  ...+.+++....+|+
T Consensus        26 ~l~GK~vvVIGrS~iVG~Pla~lL~~~ga-TVt~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~lk~~~~~aDI  100 (171)
T d1edza1          26 RLYGKKCIVINRSEIVGRPLAALLANDGA-TVYSVDVNNIQK-FTRGESLK---LNKHHVEDLGEYSEDLLKKCSLDSDV  100 (171)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSC-EEEEECSSEEEE-EESCCCSS---CCCCEEEEEEECCHHHHHHHHHHCSE
T ss_pred             CCCCCEEEEECCccccHHHHHHHHHHCCC-EEEEeccccccc-ccccccee---eeeeccccccccchhHHhhccccCCE
Confidence            57799999999999999999999999999 776554321110 00000000   001111222  345668888889999


Q ss_pred             EEEecccCC
Q 023689           84 VFHVASPCT   92 (278)
Q Consensus        84 vi~~a~~~~   92 (278)
                      ||..+|...
T Consensus       101 vIsavG~p~  109 (171)
T d1edza1         101 VITGVPSEN  109 (171)
T ss_dssp             EEECCCCTT
T ss_pred             EEEccCCCc
Confidence            998887644

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=96.43  E-value=0.0028  Score=42.71  Aligned_cols=37  Identities=19%  Similarity=0.296  Sum_probs=32.0

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCC
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS   45 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~   45 (278)
                      .+.|+|+|.|| |++|.+++..|.+.|. +|+.+.+.+.
T Consensus        28 ~~~k~vvViGg-G~iG~E~A~~l~~~g~-~Vtlie~~~~   64 (123)
T d1nhpa2          28 PEVNNVVVIGS-GYIGIEAAEAFAKAGK-KVTVIDILDR   64 (123)
T ss_dssp             TTCCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESSSS
T ss_pred             cCCCEEEEECC-hHHHHHHHHHhhccce-EEEEEEecCc
Confidence            34689999988 9999999999999999 8988877653

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=96.35  E-value=0.0032  Score=42.27  Aligned_cols=36  Identities=17%  Similarity=0.171  Sum_probs=32.0

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCC
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD   46 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~   46 (278)
                      .++++|.|| |++|-+++..|.+.|. +|..+.+.+..
T Consensus        30 ~~~vvIIGg-G~iG~E~A~~l~~~g~-~Vtli~~~~~~   65 (121)
T d1d7ya2          30 QSRLLIVGG-GVIGLELAATARTAGV-HVSLVETQPRL   65 (121)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESSSST
T ss_pred             CCeEEEECc-chhHHHHHHHhhcccc-eEEEEeecccc
Confidence            579999988 9999999999999999 89998887643

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.31  E-value=0.003  Score=44.88  Aligned_cols=44  Identities=16%  Similarity=0.111  Sum_probs=35.9

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccC
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL   53 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~   53 (278)
                      .+.+|+|.|+ |.+|...+..+...|+ +|+++++++++.+..+++
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~-~Vi~~~~~~~~~~~a~~~   70 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGL-HVAAIDIDDAKLELARKL   70 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHT
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCC-ccceecchhhHHHhhhcc
Confidence            3679999987 8999999998888998 899999887666555554

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=96.31  E-value=0.0039  Score=38.02  Aligned_cols=35  Identities=20%  Similarity=0.261  Sum_probs=30.4

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCC
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS   45 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~   45 (278)
                      ||+|.|.|+ |.+|+-++..-.+.|+ ++..++-+++
T Consensus         1 ~k~vgIlG~-GQLgrMl~~Aa~~LG~-~v~vldp~~~   35 (78)
T d3etja2           1 MKQVCVLGN-GQLGRMLRQAGEPLGI-AVWPVGLDAE   35 (78)
T ss_dssp             CEEEEEEBC-SHHHHHHHHHHGGGTE-EEEEECTTSC
T ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCC-EEEEEcCCCC
Confidence            589999988 9999999999999999 8887776543

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=96.29  E-value=0.0032  Score=45.87  Aligned_cols=70  Identities=16%  Similarity=0.016  Sum_probs=49.5

Q ss_pred             cccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEE
Q 023689            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (278)
Q Consensus         5 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~v   84 (278)
                      ..+.++++.|.|. |-||+.+++.|..-|. .|...++..........             ..+....++.++++.+|+|
T Consensus        40 ~~l~~~~vgiiG~-G~IG~~va~~l~~fg~-~v~~~d~~~~~~~~~~~-------------~~~~~~~~l~~~l~~sD~v  104 (188)
T d2naca1          40 YDLEAMHVGTVAA-GRIGLAVLRRLAPFDV-HLHYTDRHRLPESVEKE-------------LNLTWHATREDMYPVCDVV  104 (188)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHGGGTC-EEEEECSSCCCHHHHHH-------------HTCEECSSHHHHGGGCSEE
T ss_pred             eeccccceeeccc-cccchhhhhhhhccCc-eEEEEeecccccccccc-------------ccccccCCHHHHHHhccch
Confidence            3566889999987 9999999999998898 89888876543222211             1122335677888888988


Q ss_pred             EEecc
Q 023689           85 FHVAS   89 (278)
Q Consensus        85 i~~a~   89 (278)
                      +.+..
T Consensus       105 ~~~~p  109 (188)
T d2naca1         105 TLNCP  109 (188)
T ss_dssp             EECSC
T ss_pred             hhccc
Confidence            65543

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=96.26  E-value=0.00086  Score=47.18  Aligned_cols=41  Identities=15%  Similarity=0.076  Sum_probs=33.6

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccc
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF   51 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~   51 (278)
                      |||.++|+ |-+|+++++.|++.|.++|.+.+|+++..+.+.
T Consensus         1 MkI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~   41 (152)
T d1yqga2           1 MNVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLE   41 (152)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHH
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhh
Confidence            57999987 999999999999888449999999876655543

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=96.24  E-value=0.0037  Score=41.66  Aligned_cols=35  Identities=11%  Similarity=0.193  Sum_probs=31.5

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCC
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS   45 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~   45 (278)
                      .++++|.|| |++|-+++..|.+.|. +|+.+.|.+.
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~-~Vtlv~~~~~   56 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGI-DSYIFARGNR   56 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTC-EEEEECSSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccc-cceeeehhcc
Confidence            579999998 9999999999999999 9999888654

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.24  E-value=0.0043  Score=41.24  Aligned_cols=35  Identities=20%  Similarity=0.294  Sum_probs=31.5

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCC
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS   45 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~   45 (278)
                      .++++|.|| |++|-.++..|.+.|. +|+++.|.+.
T Consensus        22 p~~v~IiGg-G~ig~E~A~~l~~~G~-~Vtlve~~~~   56 (117)
T d1ebda2          22 PKSLVVIGG-GYIGIELGTAYANFGT-KVTILEGAGE   56 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESSSS
T ss_pred             CCeEEEECC-Cccceeeeeeeccccc-EEEEEEecce
Confidence            479999998 9999999999999999 8998888664

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=96.23  E-value=0.0046  Score=45.40  Aligned_cols=64  Identities=19%  Similarity=0.118  Sum_probs=47.3

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      ++.+|++.|.|. |-||+.+++.|..-|. +|++.++........         ..        +..++.++++.+|+|+
T Consensus        42 ~l~~ktvgIiG~-G~IG~~va~~l~~fg~-~v~~~d~~~~~~~~~---------~~--------~~~~l~~l~~~~D~v~  102 (199)
T d1dxya1          42 ELGQQTVGVMGT-GHIGQVAIKLFKGFGA-KVIAYDPYPMKGDHP---------DF--------DYVSLEDLFKQSDVID  102 (199)
T ss_dssp             CGGGSEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSSCCSSCCT---------TC--------EECCHHHHHHHCSEEE
T ss_pred             cccceeeeeeec-ccccccccccccccce-eeeccCCccchhhhc---------ch--------hHHHHHHHHHhcccce
Confidence            456799999987 9999999999999999 898888755432110         11        2235778888899887


Q ss_pred             Eec
Q 023689           86 HVA   88 (278)
Q Consensus        86 ~~a   88 (278)
                      .+.
T Consensus       103 ~~~  105 (199)
T d1dxya1         103 LHV  105 (199)
T ss_dssp             ECC
T ss_pred             eee
Confidence            654

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.18  E-value=0.0041  Score=45.52  Aligned_cols=75  Identities=15%  Similarity=0.088  Sum_probs=51.2

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCCh---hhHHHHhc--Ccc
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS---GAVSRAVE--GCK   82 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~---~~~~~~~~--~~d   82 (278)
                      .+.+|||.|+ |.+|...+..+...|...|++.++++++.+..+++      +...+. |-.+.   +.+.+...  ++|
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~------Ga~~~~-~~~~~~~~~~i~~~t~g~g~D   96 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQ------GFEIAD-LSLDTPLHEQIAALLGEPEVD   96 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT------TCEEEE-TTSSSCHHHHHHHHHSSSCEE
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhhhc------cccEEE-eCCCcCHHHHHHHHhCCCCcE
Confidence            3679999986 89998888888778886888888877666555554      344332 22232   23444433  589


Q ss_pred             EEEEeccc
Q 023689           83 GVFHVASP   90 (278)
Q Consensus        83 ~vi~~a~~   90 (278)
                      ++|.+.|.
T Consensus        97 ~vid~vG~  104 (195)
T d1kola2          97 CAVDAVGF  104 (195)
T ss_dssp             EEEECCCT
T ss_pred             EEEECccc
Confidence            99999874

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=96.15  E-value=0.0072  Score=42.59  Aligned_cols=60  Identities=15%  Similarity=0.085  Sum_probs=46.2

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      .+.+|+|+|.|.|..+|+.|+..|.++|+ .|+......                           ..+.+..+++|+||
T Consensus        34 ~l~GK~v~VIGrS~~VG~Pla~lL~~~ga-tVt~~h~~t---------------------------~~l~~~~~~ADivI   85 (166)
T d1b0aa1          34 DTFGLNAVVIGASNIVGRPMSMELLLAGC-TTTVTHRFT---------------------------KNLRHHVENADLLI   85 (166)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHTTTC-EEEEECSSC---------------------------SCHHHHHHHCSEEE
T ss_pred             ccccceEEEEeccccccHHHHHHHHHhhc-ccccccccc---------------------------chhHHHHhhhhHhh
Confidence            45789999999999999999999999999 665442211                           12456678889999


Q ss_pred             EecccCCC
Q 023689           86 HVASPCTL   93 (278)
Q Consensus        86 ~~a~~~~~   93 (278)
                      ..+|....
T Consensus        86 ~a~G~p~~   93 (166)
T d1b0aa1          86 VAVGKPGF   93 (166)
T ss_dssp             ECSCCTTC
T ss_pred             hhccCccc
Confidence            99886443

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=96.14  E-value=0.00073  Score=49.46  Aligned_cols=39  Identities=8%  Similarity=0.095  Sum_probs=31.8

Q ss_pred             CceEEE-eCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCc
Q 023689            9 EETVCV-TGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS   48 (278)
Q Consensus         9 ~~~vlI-tGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~   48 (278)
                      +.+++| +||+|.+|...++.....|+ .|++++|+++..+
T Consensus        29 g~~vli~~ga~g~vG~~aiqlAk~~Ga-~vI~~v~~~~~~~   68 (189)
T d1gu7a2          29 GKDWFIQNGGTSAVGKYASQIGKLLNF-NSISVIRDRPNLD   68 (189)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHHTC-EEEEEECCCTTHH
T ss_pred             CCEEEEEeCCCchHHHHHHHHHhhcCC-eEEEEEecccccc
Confidence            456666 69999999999999888999 8988888766543

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=96.12  E-value=0.0063  Score=40.60  Aligned_cols=36  Identities=19%  Similarity=0.073  Sum_probs=32.0

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCC
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD   46 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~   46 (278)
                      .++++|.|| |+||-+++..|.+.|+ +|+.+.+++..
T Consensus        22 p~~i~IiG~-G~ig~E~A~~l~~~G~-~Vtiv~~~~~l   57 (119)
T d3lada2          22 PGKLGVIGA-GVIGLELGSVWARLGA-EVTVLEAMDKF   57 (119)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESSSSS
T ss_pred             CCeEEEECC-ChHHHHHHHHHHHcCC-ceEEEEeeccc
Confidence            479999998 9999999999999999 89988887643

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=96.11  E-value=0.0049  Score=44.13  Aligned_cols=76  Identities=14%  Similarity=0.070  Sum_probs=49.7

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCce-EEEEc-cCCC-hhhHHHHh--cCcc
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANL-RVFEA-DVLD-SGAVSRAV--EGCK   82 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v-~~~~~-Dl~d-~~~~~~~~--~~~d   82 (278)
                      .+.+|+|.|+ |.+|...+..+...|..+|++.++++++.+..+++      +. +.+.. +-.+ .+.+.+..  .++|
T Consensus        28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~------GAd~~in~~~~~~~~~~~~~~~~~~G~d  100 (175)
T d1cdoa2          28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVF------GATDFVNPNDHSEPISQVLSKMTNGGVD  100 (175)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT------TCCEEECGGGCSSCHHHHHHHHHTSCBS
T ss_pred             CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHHHc------CCcEEEcCCCcchhHHHHHHhhccCCcc
Confidence            4578999987 66888888888888876899898888777666655      32 23321 1111 12333333  3689


Q ss_pred             EEEEeccc
Q 023689           83 GVFHVASP   90 (278)
Q Consensus        83 ~vi~~a~~   90 (278)
                      ++|.+.|.
T Consensus       101 ~vid~~G~  108 (175)
T d1cdoa2         101 FSLECVGN  108 (175)
T ss_dssp             EEEECSCC
T ss_pred             eeeeecCC
Confidence            99999765

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.09  E-value=0.0051  Score=41.25  Aligned_cols=36  Identities=14%  Similarity=0.189  Sum_probs=32.0

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCC
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD   46 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~   46 (278)
                      .++++|.|| |+||-+++..|.+.|+ +|..+.+++..
T Consensus        23 p~~~vIiG~-G~ig~E~A~~l~~lG~-~Vtii~~~~~~   58 (122)
T d1v59a2          23 PKRLTIIGG-GIIGLEMGSVYSRLGS-KVTVVEFQPQI   58 (122)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSSSSS
T ss_pred             CCeEEEECC-CchHHHHHHHHHhhCc-ceeEEEecccc
Confidence            479999998 9999999999999999 99988886643

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=96.07  E-value=0.041  Score=41.49  Aligned_cols=44  Identities=18%  Similarity=0.201  Sum_probs=34.9

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccc
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL   50 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~   50 (278)
                      +++.++|+|.|+ |++|++++..|...|...+++++.+.-....+
T Consensus        27 kL~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL   70 (247)
T d1jw9b_          27 ALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNL   70 (247)
T ss_dssp             HHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGG
T ss_pred             HHhCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCcccchhhh
Confidence            355679999997 88999999999999998888887654444333

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=96.04  E-value=0.0036  Score=45.65  Aligned_cols=69  Identities=16%  Similarity=0.047  Sum_probs=48.2

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      +..+|++.|.|. |.||+.+++.+..-|. +|...++..........             ......+++.++++.+|+|+
T Consensus        44 ~l~g~tvgIiG~-G~IG~~va~~l~~fg~-~v~~~d~~~~~~~~~~~-------------~~~~~~~~l~~ll~~sD~v~  108 (191)
T d1gdha1          44 KLDNKTLGIYGF-GSIGQALAKRAQGFDM-DIDYFDTHRASSSDEAS-------------YQATFHDSLDSLLSVSQFFS  108 (191)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTC-EEEEECSSCCCHHHHHH-------------HTCEECSSHHHHHHHCSEEE
T ss_pred             eecccceEEeec-ccchHHHHHHHHhhcc-ccccccccccccchhhc-------------ccccccCCHHHHHhhCCeEE
Confidence            445799999987 9999999999998899 88888765443222111             11122346788889999886


Q ss_pred             Eecc
Q 023689           86 HVAS   89 (278)
Q Consensus        86 ~~a~   89 (278)
                      .+..
T Consensus       109 l~~p  112 (191)
T d1gdha1         109 LNAP  112 (191)
T ss_dssp             ECCC
T ss_pred             ecCC
Confidence            5543

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.01  E-value=0.0022  Score=47.21  Aligned_cols=69  Identities=17%  Similarity=0.135  Sum_probs=45.9

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc-CccEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-GCKGV   84 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-~~d~v   84 (278)
                      .+++|+|.|-|- |-+|+++++.|.+.|. .|++.+.+..........      +.+.+     +.   .+++. .+|++
T Consensus        24 ~L~gk~v~IqG~-G~VG~~~A~~L~~~Ga-kvvv~d~d~~~~~~~~~~------g~~~~-----~~---~~~~~~~~DI~   87 (201)
T d1c1da1          24 SLDGLTVLVQGL-GAVGGSLASLAAEAGA-QLLVADTDTERVAHAVAL------GHTAV-----AL---EDVLSTPCDVF   87 (201)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHT------TCEEC-----CG---GGGGGCCCSEE
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCC-EEEEecchHHHHHHHHhh------ccccc-----Cc---cccccccceee
Confidence            477899999985 9999999999999999 787666544332222221      22211     22   23343 78999


Q ss_pred             EEeccc
Q 023689           85 FHVASP   90 (278)
Q Consensus        85 i~~a~~   90 (278)
                      +-||..
T Consensus        88 iPcA~~   93 (201)
T d1c1da1          88 APCAMG   93 (201)
T ss_dssp             EECSCS
T ss_pred             eccccc
Confidence            988743

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=95.97  E-value=0.0091  Score=43.32  Aligned_cols=66  Identities=15%  Similarity=0.005  Sum_probs=47.4

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      ++.++++.|.|- |.||+.+++.|..-|. +|+..++.......          ..       ...+++.++++.+|+|+
T Consensus        41 ~l~~~~vgiiG~-G~IG~~va~~l~~fg~-~v~~~d~~~~~~~~----------~~-------~~~~~l~ell~~sDii~  101 (188)
T d1sc6a1          41 EARGKKLGIIGY-GHIGTQLGILAESLGM-YVYFYDIENKLPLG----------NA-------TQVQHLSDLLNMSDVVS  101 (188)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSSCCCCCT----------TC-------EECSCHHHHHHHCSEEE
T ss_pred             cccceEEEEeec-ccchhhhhhhcccccc-eEeeccccccchhh----------hh-------hhhhhHHHHHhhcccee
Confidence            456889999966 9999999999999999 88888765432211          11       11135778888899987


Q ss_pred             Eeccc
Q 023689           86 HVASP   90 (278)
Q Consensus        86 ~~a~~   90 (278)
                      -+...
T Consensus       102 i~~pl  106 (188)
T d1sc6a1         102 LHVPE  106 (188)
T ss_dssp             ECCCS
T ss_pred             ecccC
Confidence            66543

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.96  E-value=0.0037  Score=43.66  Aligned_cols=35  Identities=11%  Similarity=0.226  Sum_probs=30.8

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEec
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVF   42 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r   42 (278)
                      ++++|++||+|| |.+|..-++.|++.|. .|+.+.-
T Consensus        10 ~l~gkrvLViGg-G~va~~ka~~Ll~~GA-~VtVvap   44 (150)
T d1kyqa1          10 QLKDKRILLIGG-GEVGLTRLYKLMPTGC-KLTLVSP   44 (150)
T ss_dssp             CCTTCEEEEEEE-SHHHHHHHHHHGGGTC-EEEEEEE
T ss_pred             eeCCCEEEEECC-CHHHHHHHHHHHHCCC-EEEEEeC
Confidence            567899999999 8899999999999999 7777743

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=95.93  E-value=0.0065  Score=40.32  Aligned_cols=35  Identities=26%  Similarity=0.252  Sum_probs=31.1

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCC
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS   45 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~   45 (278)
                      .++++|.|| |++|-+++..|.+.|. +|..+.|.+.
T Consensus        21 p~~vvIiGg-G~ig~E~A~~l~~~G~-~Vtlve~~~~   55 (116)
T d1gesa2          21 PERVAVVGA-GYIGVELGGVINGLGA-KTHLFEMFDA   55 (116)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSSSS
T ss_pred             CCEEEEECC-ChhhHHHHHHhhcccc-EEEEEeecch
Confidence            478999988 9999999999999999 8988887654

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.93  E-value=0.016  Score=40.98  Aligned_cols=59  Identities=14%  Similarity=0.095  Sum_probs=45.1

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      ++.+|+|.|.|.|.-+|+.|+..|.++|+ .|.......                           ..+.+..++.|++|
T Consensus        36 ~l~Gk~vvVIGrS~iVGrPLa~lL~~~ga-tVt~~~~~t---------------------------~~l~~~~~~aDivi   87 (170)
T d1a4ia1          36 PIAGRHAVVVGRSKIVGAPMHDLLLWNNA-TVTTCHSKT---------------------------AHLDEEVNKGDILV   87 (170)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTC---------------------------SSHHHHHTTCSEEE
T ss_pred             ccccceEEEEecCCccchHHHHHHHhccC-ceEEEeccc---------------------------ccHHHHHhhccchh
Confidence            45789999999999999999999999998 666543321                           12455677888888


Q ss_pred             EecccCC
Q 023689           86 HVASPCT   92 (278)
Q Consensus        86 ~~a~~~~   92 (278)
                      ..+|...
T Consensus        88 ~a~G~~~   94 (170)
T d1a4ia1          88 VATGQPE   94 (170)
T ss_dssp             ECCCCTT
T ss_pred             hcccccc
Confidence            8877644

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=95.91  E-value=0.0074  Score=43.26  Aligned_cols=72  Identities=11%  Similarity=0.182  Sum_probs=52.2

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEec
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a   88 (278)
                      .+|-|+|- |.+|..+++.|++.|+ .|++.+|++++.+.+........ ..    .-....+++.+.+..+|.++-+.
T Consensus         3 ~nIg~IGl-G~MG~~mA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~~~~-~~----~~a~~~~~~~~~~~~~~~ii~~~   74 (176)
T d2pgda2           3 ADIALIGL-AVMGQNLILNMNDHGF-VVCAFNRTVSKVDDFLANEAKGT-KV----LGAHSLEEMVSKLKKPRRIILLV   74 (176)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTC-CEEEECSSTHHHHHHHHTTTTTS-SC----EECSSHHHHHHHBCSSCEEEECS
T ss_pred             CcEEEEeE-hHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHhccccc-cc----cchhhhhhhhhhhcccceEEEec
Confidence            57899987 9999999999999999 89999998876655433211110 00    11345677888888999998763

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=95.91  E-value=0.0051  Score=41.25  Aligned_cols=35  Identities=23%  Similarity=0.360  Sum_probs=30.6

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCC
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS   45 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~   45 (278)
                      .++++|.|| |++|-+++..|.+.|+ +|+.+.+.+.
T Consensus        32 ~~~vvIiGg-G~iG~E~A~~l~~~g~-~Vtlv~~~~~   66 (122)
T d1xhca2          32 SGEAIIIGG-GFIGLELAGNLAEAGY-HVKLIHRGAM   66 (122)
T ss_dssp             HSEEEEEEC-SHHHHHHHHHHHHTTC-EEEEECSSSC
T ss_pred             CCcEEEECC-cHHHHHHHHHhhcccc-eEEEEecccc
Confidence            478999988 9999999999999999 8888877653

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=95.90  E-value=0.0057  Score=46.34  Aligned_cols=33  Identities=27%  Similarity=0.303  Sum_probs=30.2

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCC
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG   44 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   44 (278)
                      |||+|+|| |..|...+..|.++|+ +|.++.|+.
T Consensus         7 ~kVvVIGa-GiaGl~~A~~L~~~G~-~V~vier~~   39 (268)
T d1c0pa1           7 KRVVVLGS-GVIGLSSALILARKGY-SVHILARDL   39 (268)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESSC
T ss_pred             CcEEEECc-cHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence            68999999 9999999999999999 899888754

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=95.89  E-value=0.022  Score=35.63  Aligned_cols=68  Identities=13%  Similarity=0.133  Sum_probs=45.1

Q ss_pred             ceEEEeCcchhhHH-HHHHHHHHCCCCeEEEEecCCCC-CcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEe
Q 023689           10 ETVCVTGANGFIGT-WLVKTLLDNNYTSINATVFPGSD-SSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (278)
Q Consensus        10 ~~vlItGatG~iG~-~l~~~L~~~g~~~v~~~~r~~~~-~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~   87 (278)
                      |||.++|- |++|. .|++.|.+.|+ .|.+.++.... .+.++..      ++.+..+  .+++.    ++++|.||..
T Consensus         2 ~~ihfiGI-gG~GMs~LA~~L~~~G~-~VsGSD~~~~~~t~~L~~~------Gi~i~~g--h~~~~----i~~~d~vV~S   67 (89)
T d1j6ua1           2 MKIHFVGI-GGIGMSAVALHEFSNGN-DVYGSNIEETERTAYLRKL------GIPIFVP--HSADN----WYDPDLVIKT   67 (89)
T ss_dssp             CEEEEETT-TSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHHHHT------TCCEESS--CCTTS----CCCCSEEEEC
T ss_pred             cEEEEEeE-CHHHHHHHHHHHHhCCC-eEEEEeCCCChhHHHHHHC------CCeEEee--ecccc----cCCCCEEEEe
Confidence            67888887 55564 78999999999 99999876532 2223332      5555443  22222    3678999988


Q ss_pred             cccC
Q 023689           88 ASPC   91 (278)
Q Consensus        88 a~~~   91 (278)
                      .++.
T Consensus        68 sAI~   71 (89)
T d1j6ua1          68 PAVR   71 (89)
T ss_dssp             TTCC
T ss_pred             cCcC
Confidence            8773

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.87  E-value=0.0043  Score=44.95  Aligned_cols=67  Identities=15%  Similarity=0.003  Sum_probs=47.2

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      +..+|++.|.|. |.||+.+++.+..-|. +|++.++..........       .+        ...++.++++.+|+|+
T Consensus        41 ~l~~k~vgiiG~-G~IG~~va~~~~~fg~-~v~~~d~~~~~~~~~~~-------~~--------~~~~l~ell~~sDiv~  103 (184)
T d1ygya1          41 EIFGKTVGVVGL-GRIGQLVAQRIAAFGA-YVVAYDPYVSPARAAQL-------GI--------ELLSLDDLLARADFIS  103 (184)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTC-EEEEECTTSCHHHHHHH-------TC--------EECCHHHHHHHCSEEE
T ss_pred             cccceeeeeccc-cchhHHHHHHhhhccc-eEEeecCCCChhHHhhc-------Cc--------eeccHHHHHhhCCEEE
Confidence            355789999986 9999999999998898 89888775543222111       11        2235778889999986


Q ss_pred             Eecc
Q 023689           86 HVAS   89 (278)
Q Consensus        86 ~~a~   89 (278)
                      .+..
T Consensus       104 ~~~P  107 (184)
T d1ygya1         104 VHLP  107 (184)
T ss_dssp             ECCC
T ss_pred             EcCC
Confidence            6543

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=95.87  E-value=0.0064  Score=41.43  Aligned_cols=36  Identities=19%  Similarity=0.350  Sum_probs=31.9

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCC
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS   45 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~   45 (278)
                      +.++++|.|| |++|-+++..|.+.|. +|..+.+.+.
T Consensus        34 ~~k~v~VIGg-G~iG~E~A~~l~~~g~-~Vtvie~~~~   69 (133)
T d1q1ra2          34 ADNRLVVIGG-GYIGLEVAATAIKANM-HVTLLDTAAR   69 (133)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSSSS
T ss_pred             cCCEEEEECC-chHHHHHHHHHHhhCc-ceeeeeeccc
Confidence            3589999988 9999999999999999 8988887664

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.80  E-value=0.0059  Score=44.28  Aligned_cols=38  Identities=16%  Similarity=0.054  Sum_probs=32.6

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCC
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD   46 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~   46 (278)
                      .+|||+|+|| |..|...+..|.+.|+++|+++.|++..
T Consensus         3 ~~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~~   40 (196)
T d1gtea4           3 YSAKIALLGA-GPASISCASFLARLGYSDITIFEKQEYV   40 (196)
T ss_dssp             GGCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSSC
T ss_pred             CCCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCcc
Confidence            4689999999 9999999999999998558888876543

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=95.76  E-value=0.0091  Score=39.78  Aligned_cols=37  Identities=14%  Similarity=-0.055  Sum_probs=32.1

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCC
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS   45 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~   45 (278)
                      ..+++++|.|| |++|-.++..|.+.|. +|..+.|.+.
T Consensus        20 ~~~~~vvVvGg-G~ig~E~A~~l~~~g~-~vt~i~~~~~   56 (121)
T d1mo9a2          20 EPGSTVVVVGG-SKTAVEYGCFFNATGR-RTVMLVRTEP   56 (121)
T ss_dssp             CCCSEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSSCT
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcch-hheEeeccch
Confidence            34689999988 9999999999999998 8888888654

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.76  E-value=0.0085  Score=40.28  Aligned_cols=36  Identities=14%  Similarity=0.136  Sum_probs=31.9

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCC
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD   46 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~   46 (278)
                      .|+++|.|| |++|-+++..|.+.|. +|+.+.|++..
T Consensus        22 pk~vvIvGg-G~iG~E~A~~l~~~G~-~Vtlv~~~~~~   57 (125)
T d3grsa2          22 PGRSVIVGA-GYIAVEMAGILSALGS-KTSLMIRHDKV   57 (125)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSSSSS
T ss_pred             CCEEEEEcC-CccHHHHHHHHhcCCc-EEEEEeecccc
Confidence            479999998 9999999999999999 89999886643

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.72  E-value=0.0063  Score=50.15  Aligned_cols=77  Identities=21%  Similarity=0.149  Sum_probs=50.6

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccccc--CCCC-------------------CCCceEEEEc
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA--LPGA-------------------GDANLRVFEA   66 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~--~~~~-------------------~~~~v~~~~~   66 (278)
                      +..||||.|+ |++|.++++.|...|...+.+++.+.-....+..  +...                   ...++..+..
T Consensus        36 ~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~  114 (426)
T d1yovb1          36 DTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFN  114 (426)
T ss_dssp             HHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEECS
T ss_pred             hcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCceEeeec
Confidence            3468999999 7799999999999998788888765443333322  1000                   0124555556


Q ss_pred             cCCChhhHHHHhcCccEEEEe
Q 023689           67 DVLDSGAVSRAVEGCKGVFHV   87 (278)
Q Consensus        67 Dl~d~~~~~~~~~~~d~vi~~   87 (278)
                      ++.+..  .+.++++|+||.+
T Consensus       115 ~i~~~~--~~~~~~~DlVi~~  133 (426)
T d1yovb1         115 KIQDFN--DTFYRQFHIIVCG  133 (426)
T ss_dssp             CGGGBC--HHHHTTCSEEEEC
T ss_pred             cccchH--HHHHHhcchheec
Confidence            665433  3567788888865

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=95.70  E-value=0.0072  Score=39.97  Aligned_cols=35  Identities=17%  Similarity=0.200  Sum_probs=30.9

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCC
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS   45 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~   45 (278)
                      .++++|.|| |++|-+++..|.+.|+ +|+.+.+.+.
T Consensus        21 p~~vvIiGg-G~~G~E~A~~l~~~g~-~Vtlve~~~~   55 (115)
T d1lvla2          21 PQHLVVVGG-GYIGLELGIAYRKLGA-QVSVVEARER   55 (115)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHTC-EEEEECSSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHHhhccc-ceEEEeeecc
Confidence            478999988 9999999999999999 8988877654

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.66  E-value=0.0072  Score=40.49  Aligned_cols=33  Identities=15%  Similarity=0.135  Sum_probs=29.4

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecC
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFP   43 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~   43 (278)
                      .++++|.|| |+||-+++..|.+.|. +|.++.|+
T Consensus        20 P~~vvIIGg-G~iG~E~A~~l~~lG~-~Vtii~~~   52 (122)
T d1h6va2          20 PGKTLVVGA-SYVALECAGFLAGIGL-DVTVMVRS   52 (122)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred             CCeEEEECC-CccHHHHHHHHhhcCC-eEEEEEec
Confidence            468999998 9999999999999999 88888764

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.59  E-value=0.0058  Score=43.30  Aligned_cols=73  Identities=16%  Similarity=0.109  Sum_probs=49.1

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCCh---hhHHHHhcCccEE
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS---GAVSRAVEGCKGV   84 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~---~~~~~~~~~~d~v   84 (278)
                      .+.+|||.|+ |.+|...+..+...|+ +|+++++++++.+..+.+      ++..+. |-.+.   +.+.+..++.|.+
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~-~v~~~~~~~~r~~~~k~~------Ga~~~~-~~~~~~~~~~~~~~~~~~~~~   97 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKEL------GADLVV-NPLKEDAAKFMKEKVGGVHAA   97 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHT------TCSEEE-CTTTSCHHHHHHHHHSSEEEE
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCC-eEeccCCCHHHhhhhhhc------Ccceec-ccccchhhhhcccccCCCceE
Confidence            4578999976 8899999999989999 898888877766665554      333332 22222   3355555667776


Q ss_pred             EEecc
Q 023689           85 FHVAS   89 (278)
Q Consensus        85 i~~a~   89 (278)
                      |.+++
T Consensus        98 v~~~~  102 (168)
T d1rjwa2          98 VVTAV  102 (168)
T ss_dssp             EESSC
T ss_pred             EeecC
Confidence            66653

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=95.55  E-value=0.041  Score=36.62  Aligned_cols=73  Identities=12%  Similarity=0.122  Sum_probs=50.9

Q ss_pred             CCceEEEeCc----------chhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHH
Q 023689            8 EEETVCVTGA----------NGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA   77 (278)
Q Consensus         8 ~~~~vlItGa----------tG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~   77 (278)
                      .-|||||.|+          .-+-+.+.++.|.+.|+ +++.+..+++....-...       ..-+...-...+.+.++
T Consensus         6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~-~~iliN~NP~TVstd~d~-------aD~lYfePlt~e~v~~I   77 (127)
T d1a9xa3           6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGY-RVINVNSNPATIMTDPEM-------ADATYIEPIHWEVVRKI   77 (127)
T ss_dssp             SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTC-EEEEECSCTTCGGGCGGG-------SSEEECSCCCHHHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCC-eEEEecCchHhhhcChhh-------cceeeeecCCHHHHHHH
Confidence            3489999999          55789999999999999 888888777664332221       11223334455777777


Q ss_pred             hc--CccEEEEec
Q 023689           78 VE--GCKGVFHVA   88 (278)
Q Consensus        78 ~~--~~d~vi~~a   88 (278)
                      ++  ++|.|+-..
T Consensus        78 i~~E~pd~il~~~   90 (127)
T d1a9xa3          78 IEKERPDAVLPTM   90 (127)
T ss_dssp             HHHHCCSEEECSS
T ss_pred             HHHhCcCCeEEEe
Confidence            65  789887543

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=95.46  E-value=0.0092  Score=39.99  Aligned_cols=36  Identities=19%  Similarity=0.253  Sum_probs=32.2

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCC
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD   46 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~   46 (278)
                      .++++|.|| |+||-+++..|.+.|. +|+.+.|++..
T Consensus        25 p~~~viiG~-G~iglE~A~~~~~~G~-~Vtvi~~~~~~   60 (123)
T d1dxla2          25 PKKLVVIGA-GYIGLEMGSVWGRIGS-EVTVVEFASEI   60 (123)
T ss_dssp             CSEEEESCC-SHHHHHHHHHHHHHTC-EEEEECSSSSS
T ss_pred             CCeEEEEcc-chHHHHHHHHHHhcCC-eEEEEEEcccc
Confidence            479999998 9999999999999999 99999887654

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=95.41  E-value=0.0023  Score=46.17  Aligned_cols=74  Identities=12%  Similarity=0.139  Sum_probs=46.3

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEe
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~   87 (278)
                      |||-|+|- |.+|..+++.|+++|+ +|.+.+|++++.+.+.+...... ...... ...+.+.+...+...+.++-+
T Consensus         2 MkIGvIGl-G~MG~~ma~~L~~~G~-~V~~~dr~~~~~~~l~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~   75 (178)
T d1pgja2           2 MDVGVVGL-GVMGANLALNIAEKGF-KVAVFNRTYSKSEEFMKANASAP-FAGNLK-AFETMEAFAASLKKPRKALIL   75 (178)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTC-CEEEECSSHHHHHHHHHHTTTST-TGGGEE-ECSCHHHHHHHBCSSCEEEEC
T ss_pred             CEEEEEee-hHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHcCCccc-cccchh-hhhhhhHHHHhcccceEEEEe
Confidence            57888866 9999999999999999 89999998776555433211100 000011 123444555566666665544

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.40  E-value=0.0083  Score=43.70  Aligned_cols=36  Identities=14%  Similarity=0.170  Sum_probs=32.4

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCC
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD   46 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~   46 (278)
                      -|+|.|.|+ |.+|+.++..+...|+ .|++.+++++.
T Consensus         4 IkkvaViGa-G~mG~~iA~~~a~~G~-~V~l~D~~~~~   39 (192)
T d1f0ya2           4 VKHVTVIGG-GLMGAGIAQVAAATGH-TVVLVDQTEDI   39 (192)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSCHHH
T ss_pred             eEEEEEECc-CHHHHHHHHHHHhCCC-cEEEEECChHH
Confidence            379999999 9999999999999999 99999887654

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.40  E-value=0.0063  Score=42.77  Aligned_cols=68  Identities=13%  Similarity=0.056  Sum_probs=49.9

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      +.+|+++|.|= |.||+.+++.|...|. .|++...++..  .++..            .|-.....+++++...|+++-
T Consensus        22 l~Gk~v~V~Gy-G~iG~g~A~~~rg~G~-~V~v~e~dp~~--al~A~------------~dG~~v~~~~~a~~~adivvt   85 (163)
T d1li4a1          22 IAGKVAVVAGY-GDVGKGCAQALRGFGA-RVIITEIDPIN--ALQAA------------MEGYEVTTMDEACQEGNIFVT   85 (163)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSCHHH--HHHHH------------HTTCEECCHHHHTTTCSEEEE
T ss_pred             ecCCEEEEecc-ccccHHHHHHHHhCCC-eeEeeecccch--hHHhh------------cCceEeeehhhhhhhccEEEe
Confidence            56899999965 9999999999999999 88888765522  22221            333344457788888898887


Q ss_pred             eccc
Q 023689           87 VASP   90 (278)
Q Consensus        87 ~a~~   90 (278)
                      +.|-
T Consensus        86 aTGn   89 (163)
T d1li4a1          86 TTGC   89 (163)
T ss_dssp             CSSC
T ss_pred             cCCC
Confidence            7664

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=95.35  E-value=0.024  Score=40.48  Aligned_cols=33  Identities=18%  Similarity=0.270  Sum_probs=26.4

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEec
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVF   42 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r   42 (278)
                      |-||.|-| .|-||+.+++.|.+++.-+|+++..
T Consensus         1 MIKVaING-fGRIGR~v~Ral~~~~dievVaInd   33 (178)
T d1b7go1           1 MVNVAVNG-YGTIGKRVADAIIKQPDMKLVGVAK   33 (178)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEEC
T ss_pred             CeEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEEC
Confidence            46899998 6999999999999875437777654

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=95.25  E-value=0.014  Score=39.22  Aligned_cols=36  Identities=11%  Similarity=0.123  Sum_probs=31.7

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCC
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD   46 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~   46 (278)
                      .++++|.|| |+||-+++..|.+.|. +|+.+.+.+..
T Consensus        26 p~~vvIiGg-G~IG~E~A~~~~~~G~-~Vtive~~~~i   61 (125)
T d1ojta2          26 PGKLLIIGG-GIIGLEMGTVYSTLGS-RLDVVEMMDGL   61 (125)
T ss_dssp             CSEEEEESC-SHHHHHHHHHHHHHTC-EEEEECSSSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHhhcCCC-EEEEEEeeccc
Confidence            479999998 9999999999999999 89988876543

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=95.13  E-value=0.023  Score=41.29  Aligned_cols=38  Identities=18%  Similarity=0.276  Sum_probs=29.4

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccc
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL   50 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~   50 (278)
                      |||.|.| .|++|..++..| +.|+ +|++.+-++...+.+
T Consensus         1 MkI~ViG-lG~vGl~~a~~~-a~g~-~V~g~Din~~~v~~l   38 (196)
T d1dlja2           1 MKIAVAG-SGYVGLSLGVLL-SLQN-EVTIVDILPSKVDKI   38 (196)
T ss_dssp             CEEEEEC-CSHHHHHHHHHH-TTTS-EEEEECSCHHHHHHH
T ss_pred             CEEEEEC-CChhHHHHHHHH-HCCC-cEEEEECCHHHHHHH
Confidence            5789997 599999998755 6799 999998776544433

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=95.09  E-value=0.012  Score=41.78  Aligned_cols=35  Identities=17%  Similarity=0.085  Sum_probs=29.0

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCC-eEEEEecCC
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYT-SINATVFPG   44 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~-~v~~~~r~~   44 (278)
                      +|||+|.|| |++|-.++..|.+.+.+ +|+++.+++
T Consensus         2 gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           2 GRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            799999999 99999999999998752 667665544

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=94.99  E-value=0.015  Score=45.81  Aligned_cols=39  Identities=15%  Similarity=0.285  Sum_probs=33.3

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCc
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS   48 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~   48 (278)
                      ++|||+|+|| |.-|...|..|.+.|+ +|.++.+++....
T Consensus         1 k~KKI~IIGa-G~sGL~aA~~L~k~G~-~V~viEk~~~iGG   39 (314)
T d2bi7a1           1 KSKKILIVGA-GFSGAVIGRQLAEKGH-QVHIIDQRDHIGG   39 (314)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHTTTC-EEEEEESSSSSSG
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHhCCC-CEEEEECCCCCcC
Confidence            3589999998 9999999999999999 8988887665443

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=94.94  E-value=0.011  Score=41.41  Aligned_cols=70  Identities=10%  Similarity=0.072  Sum_probs=51.1

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      +.+|+++|.|= |.+|+.+++.|...|. .|+....+|  ...++..            .|=.....++++++..|++|-
T Consensus        21 laGk~vvV~GY-G~vGrG~A~~~rg~Ga-~V~V~E~DP--i~alqA~------------mdGf~v~~~~~a~~~aDi~vT   84 (163)
T d1v8ba1          21 ISGKIVVICGY-GDVGKGCASSMKGLGA-RVYITEIDP--ICAIQAV------------MEGFNVVTLDEIVDKGDFFIT   84 (163)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHHTC-EEEEECSCH--HHHHHHH------------TTTCEECCHHHHTTTCSEEEE
T ss_pred             ecCCEEEEecc-cccchhHHHHHHhCCC-EEEEEecCc--hhhHHHH------------hcCCccCchhHccccCcEEEE
Confidence            46899999976 9999999999999999 888776655  2233221            233334457788888999998


Q ss_pred             ecccCC
Q 023689           87 VASPCT   92 (278)
Q Consensus        87 ~a~~~~   92 (278)
                      ..|-..
T Consensus        85 aTGn~~   90 (163)
T d1v8ba1          85 CTGNVD   90 (163)
T ss_dssp             CCSSSS
T ss_pred             cCCCCc
Confidence            776533

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=94.92  E-value=0.025  Score=40.49  Aligned_cols=38  Identities=13%  Similarity=0.077  Sum_probs=33.7

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCC
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD   46 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~   46 (278)
                      .+.|+|+|+|| |..|-..+..|.++|+ +|+++.+.+..
T Consensus        41 ~~~k~V~IIGa-GPAGL~AA~~la~~G~-~Vtl~E~~~~~   78 (179)
T d1ps9a3          41 VQKKNLAVVGA-GPAGLAFAINAAARGH-QVTLFDAHSEI   78 (179)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHTTTC-EEEEEESSSSS
T ss_pred             CCCcEEEEECc-cHHHHHHHHHHHhhcc-ceEEEeccCcc
Confidence            45689999998 9999999999999999 99999887654

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=94.87  E-value=0.04  Score=38.95  Aligned_cols=63  Identities=13%  Similarity=0.191  Sum_probs=38.2

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHC-CCCeEEEEec-CCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEe
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDN-NYTSINATVF-PGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~-g~~~v~~~~r-~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~   87 (278)
                      .||.|.|. |.+|+.+++.|.+. +. +++++.. +++.....         .+.       ...+.....+++|+|+.+
T Consensus         4 irvgiiG~-G~ig~~~~~~l~~~~~~-elvav~~~~~~~~~~~---------~~~-------~~~~~~~~~~~~D~Vvi~   65 (170)
T d1f06a1           4 IRVAIVGY-GNLGRSVEKLIAKQPDM-DLVGIFSRRATLDTKT---------PVF-------DVADVDKHADDVDVLFLC   65 (170)
T ss_dssp             EEEEEECC-SHHHHHHHHHHTTCSSE-EEEEEEESSSCCSSSS---------CEE-------EGGGGGGTTTTCSEEEEC
T ss_pred             ceEEEECC-hHHHHHHHHHHHhCCCc-EEEEEEeccccccccc---------ccc-------cchhhhhhccccceEEEe
Confidence            47899985 99999999999876 45 5655544 33221110         111       112334445678988877


Q ss_pred             ccc
Q 023689           88 ASP   90 (278)
Q Consensus        88 a~~   90 (278)
                      ...
T Consensus        66 tp~   68 (170)
T d1f06a1          66 MGS   68 (170)
T ss_dssp             SCT
T ss_pred             CCC
Confidence            643

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=94.83  E-value=0.048  Score=37.14  Aligned_cols=84  Identities=18%  Similarity=0.132  Sum_probs=54.7

Q ss_pred             CCceEEEeCcc---hhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEE
Q 023689            8 EEETVCVTGAN---GFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (278)
Q Consensus         8 ~~~~vlItGat---G~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~v   84 (278)
                      +.|+|.|.|+|   +-.|..+++.|.+.|+ +|+.+.-+.   ..+               ....-..++.++-..+|.+
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~-~v~pVnP~~---~~i---------------~G~~~~~sl~dlp~~iD~v   78 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGY-DVYPVNPKY---EEV---------------LGRKCYPSVLDIPDKIEVV   78 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTC-EEEEECTTC---SEE---------------TTEECBSSGGGCSSCCSEE
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCC-EEEEECCcc---ccc---------------CCCcccccccccCccceEE
Confidence            35799999998   7899999999999999 777663221   111               1112233444444567887


Q ss_pred             EEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEE
Q 023689           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVV  128 (278)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~  128 (278)
                      +-+...          +        .+..+++.|.+.|++.+++
T Consensus        79 ~i~vp~----------~--------~~~~~~~e~~~~g~k~v~~  104 (139)
T d2d59a1          79 DLFVKP----------K--------LTMEYVEQAIKKGAKVVWF  104 (139)
T ss_dssp             EECSCH----------H--------HHHHHHHHHHHHTCSEEEE
T ss_pred             EEEeCH----------H--------HHHHHHHHHHHhCCCEEEE
Confidence            755321          1        2456778888888876555

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=94.71  E-value=0.0099  Score=38.73  Aligned_cols=37  Identities=22%  Similarity=0.048  Sum_probs=29.1

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCC
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG   44 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   44 (278)
                      .+++|+|+|.|+ |.=|.-++..|.+... .++...|+.
T Consensus        29 ~f~gK~VlVVG~-g~Sa~dia~~l~~~ak-~v~~~~~r~   65 (107)
T d2gv8a2          29 LFVGESVLVVGG-ASSANDLVRHLTPVAK-HPIYQSLLG   65 (107)
T ss_dssp             GGTTCCEEEECS-SHHHHHHHHHHTTTSC-SSEEEECTT
T ss_pred             hcCCCeEEEECC-CCCHHHHHHHHHHhcC-EEEEEEecC
Confidence            567899999988 8999999999988876 444444443

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=94.71  E-value=0.072  Score=41.00  Aligned_cols=35  Identities=20%  Similarity=0.098  Sum_probs=30.3

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEec
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVF   42 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r   42 (278)
                      .+++|+|.|-|- |-+|+++++.|.+.|. .|+++.-
T Consensus        33 ~L~gktvaIqGf-GnVG~~~A~~L~e~Ga-kvv~vsD   67 (293)
T d1hwxa1          33 GFGDKTFAVQGF-GNVGLHSMRYLHRFGA-KCVAVGE   67 (293)
T ss_dssp             SSTTCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEEE
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCC-EEEEEEc
Confidence            467899999987 9999999999999999 7777654

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=94.64  E-value=0.053  Score=35.66  Aligned_cols=82  Identities=17%  Similarity=0.269  Sum_probs=53.4

Q ss_pred             ceEEEeCcc---hhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689           10 ETVCVTGAN---GFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus        10 ~~vlItGat---G~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      |+|.|.|+|   +-.|..+.+.|++.|+ +|+.+.  +.. +.+               ..+.-..++.++-..+|.++-
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~-~V~pVn--P~~-~~i---------------~G~~~y~sl~~lp~~~D~vvi   62 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGF-EVLPVN--PNY-DEI---------------EGLKCYRSVRELPKDVDVIVF   62 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTC-EEEEEC--TTC-SEE---------------TTEECBSSGGGSCTTCCEEEE
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCC-EEEEEc--ccc-ccc---------------cCccccccchhccccceEEEE
Confidence            689999998   7799999999999999 777663  221 111               122223344455557888775


Q ss_pred             ecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEE
Q 023689           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVV  128 (278)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~  128 (278)
                      +...          +.        +..+++.|.+.|++.+++
T Consensus        63 ~vp~----------~~--------~~~~l~~~~~~g~k~v~~   86 (116)
T d1y81a1          63 VVPP----------KV--------GLQVAKEAVEAGFKKLWF   86 (116)
T ss_dssp             CSCH----------HH--------HHHHHHHHHHTTCCEEEE
T ss_pred             EeCH----------HH--------HHHHHHHHHhcCCceEEe
Confidence            5221          11        446777788888876554

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=94.63  E-value=0.015  Score=42.01  Aligned_cols=37  Identities=16%  Similarity=0.179  Sum_probs=32.6

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCC
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD   46 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~   46 (278)
                      +-++|.|.|+ |.+|+.++..++..|+ .|++.+++++.
T Consensus         3 ~I~~vaViGa-G~mG~~iA~~~a~~G~-~V~l~D~~~~~   39 (186)
T d1wdka3           3 DVKQAAVLGA-GIMGGGIAYQSASKGT-PILMKDINEHG   39 (186)
T ss_dssp             CCSSEEEECC-HHHHHHHHHHHHHTTC-CEEEECSSHHH
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhCCC-eEEEEECCHHH
Confidence            3578999999 9999999999999999 89999887654

>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Transcriptional repressor Rex, C-terminal domain
domain: Transcriptional repressor Rex, C-terminal domain
species: Thermus aquaticus [TaxId: 271]

Probab=94.56  E-value=0.029  Score=37.59  Aligned_cols=90  Identities=8%  Similarity=0.082  Sum_probs=55.6

Q ss_pred             ceEEEeCcchhhHHHHHHHHHH-CCCCeEEEEecCCC-CCcccccCCCCCCCceEEEEccCCChhhHHHHhc-CccEEEE
Q 023689           10 ETVCVTGANGFIGTWLVKTLLD-NNYTSINATVFPGS-DSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-GCKGVFH   86 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~-~g~~~v~~~~r~~~-~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-~~d~vi~   86 (278)
                      .+|+|.|| |.+|+.|++.+.. .++ +++++..+.. .....-.       ++..+     +.+.+.+..+ .+++++-
T Consensus         4 ~~v~I~Ga-G~~G~~l~~~l~~~~~~-~iv~fiDdd~~k~G~~I~-------Gi~V~-----~~~~l~~~~~~~i~iai~   69 (126)
T d2dt5a2           4 WGLCIVGM-GRLGSALADYPGFGESF-ELRGFFDVDPEKVGRPVR-------GGVIE-----HVDLLPQRVPGRIEIALL   69 (126)
T ss_dssp             EEEEEECC-SHHHHHHHHCSCCCSSE-EEEEEEESCTTTTTCEET-------TEEEE-----EGGGHHHHSTTTCCEEEE
T ss_pred             ceEEEEcC-CHHHHHHHHhHhhcCCc-EEEEEEeCchHhcCCEEC-------CEEEe-----cHHHHHHHHhhcccEEEE
Confidence            48999998 9999999998754 466 7777665443 2222111       55544     2344666554 4555544


Q ss_pred             ecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      +...                  ...+.+++.|.+.|++.+..++.
T Consensus        70 ~i~~------------------~~~~~I~d~l~~~gIk~I~~f~~   96 (126)
T d2dt5a2          70 TVPR------------------EAAQKAADLLVAAGIKGILNFAP   96 (126)
T ss_dssp             CSCH------------------HHHHHHHHHHHHHTCCEEEECSS
T ss_pred             eCCH------------------HHHHHHHHHHHHcCCCEEeecCc
Confidence            3211                  11346788888889988888765

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=94.56  E-value=0.15  Score=33.43  Aligned_cols=71  Identities=15%  Similarity=0.093  Sum_probs=48.0

Q ss_pred             CceEEEeCc----------chhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHh
Q 023689            9 EETVCVTGA----------NGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAV   78 (278)
Q Consensus         9 ~~~vlItGa----------tG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~   78 (278)
                      .|+|||.|+          --+-+.+.++.|.+.|+ +++.+..+++....-...       ..-+...-...+.+.+++
T Consensus         4 ~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~-~~IliN~NPeTVstd~d~-------aD~lYfeplt~e~v~~Ii   75 (121)
T d1a9xa4           4 REKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGY-ETIMVNCNPETVSTDYDT-------SDRLYFEPVTLEDVLEIV   75 (121)
T ss_dssp             SCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTC-EEEEECCCTTSSTTSTTS-------SSEEECCCCSHHHHHHHH
T ss_pred             CCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCC-eEEEEecChhhhhcChhh-------cCceEEccCCHHHHHHHH
Confidence            479999999          34889999999999999 888888777664432221       112223333456677665


Q ss_pred             c--CccEEEEe
Q 023689           79 E--GCKGVFHV   87 (278)
Q Consensus        79 ~--~~d~vi~~   87 (278)
                      +  ++|.|+--
T Consensus        76 ~~E~p~~ii~~   86 (121)
T d1a9xa4          76 RIEKPKGVIVQ   86 (121)
T ss_dssp             HHHCCSEEECS
T ss_pred             HHhCCCEEEee
Confidence            4  78888643

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=94.46  E-value=0.018  Score=43.94  Aligned_cols=31  Identities=23%  Similarity=0.218  Sum_probs=28.3

Q ss_pred             EEEeCcchhhHHHHHHHHHHCCCCeEEEEecCC
Q 023689           12 VCVTGANGFIGTWLVKTLLDNNYTSINATVFPG   44 (278)
Q Consensus        12 vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   44 (278)
                      |+|+|| |.+|..++..|.++|. +|+++.++.
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~-~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENK-NTALFESGT   37 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence            999998 9999999999999998 888888754

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=94.32  E-value=0.083  Score=37.30  Aligned_cols=33  Identities=12%  Similarity=0.271  Sum_probs=26.1

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEec
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVF   42 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r   42 (278)
                      |++|.|-| .|-||+.+++.|.+++.-+++++..
T Consensus         1 M~~VgING-fGRIGR~v~R~l~~~~di~vvaInd   33 (171)
T d1cf2o1           1 MKAVAING-YGTVGKRVADAIAQQDDMKVIGVSK   33 (171)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTSSSEEEEEEEE
T ss_pred             CeEEEEEc-CcHHHHHHHHHHHhCCCceEEEEec
Confidence            67999997 5999999999998876436665543

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=94.30  E-value=0.00076  Score=48.48  Aligned_cols=115  Identities=8%  Similarity=0.022  Sum_probs=64.7

Q ss_pred             ceEEEeCcchhhHHH--HHHHHHHC-C--CCeEEEEecCCCCCcccccC-----CCCCCCceEEEEccCCChhhHHHHhc
Q 023689           10 ETVCVTGANGFIGTW--LVKTLLDN-N--YTSINATVFPGSDSSHLFAL-----PGAGDANLRVFEADVLDSGAVSRAVE   79 (278)
Q Consensus        10 ~~vlItGatG~iG~~--l~~~L~~~-g--~~~v~~~~r~~~~~~~~~~~-----~~~~~~~v~~~~~Dl~d~~~~~~~~~   79 (278)
                      |||-|.|| |.+|..  ++..|+.. +  ..++...+.++++.+.....     ..... .     ..+....+..++++
T Consensus         3 mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~-~-----~~i~~~td~~eaL~   75 (171)
T d1obba1           3 VKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGA-D-----LKFEKTMNLDDVII   75 (171)
T ss_dssp             CEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTC-C-----CEEEEESCHHHHHT
T ss_pred             cEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCC-C-----eEEEEeCChhhccc
Confidence            68999997 877764  33334432 1  13888888876543221100     00000 1     12222345678899


Q ss_pred             CccEEEEecccCCCCCCCC------------------------chhhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           80 GCKGVFHVASPCTLEDPVD------------------------PEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        80 ~~d~vi~~a~~~~~~~~~~------------------------~~~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      ++|+|+..++....+.+.+                        ........|+.....+++..++.+.+.+++.-|
T Consensus        76 dad~Vv~~~~~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~g~~~~~~~~rn~~i~~~i~~~i~~~~p~a~~i~~T  151 (171)
T d1obba1          76 DADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQAA  151 (171)
T ss_dssp             TCSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             CCCeEeeecccccccceeeehhcchhhhhccCCCccccCCCCCcceeeecchHHHHHHHHHHHHHHCcCeEEEEEC
Confidence            9999999876543211000                        001113458888889999998887665555554

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=94.10  E-value=0.028  Score=43.37  Aligned_cols=35  Identities=23%  Similarity=0.233  Sum_probs=31.1

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCC
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS   45 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~   45 (278)
                      +|||+|+|| |.-|...+..|.+.|+ +|+++.+++.
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~-~V~vlE~~~~   35 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGL-NVTVFEAEGK   35 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSC-EEEEECSSSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCC-CEEEEeCCCC
Confidence            489999998 9999999999999999 8988877553

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=94.01  E-value=0.037  Score=41.76  Aligned_cols=35  Identities=14%  Similarity=0.169  Sum_probs=31.2

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCC
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS   45 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~   45 (278)
                      .+||+|+|| |..|..++..|.+.|+ +|+++.|++.
T Consensus         4 ~~kV~IiGa-G~aGl~~A~~L~~~G~-~v~v~Er~~~   38 (265)
T d2voua1           4 TDRIAVVGG-SISGLTAALMLRDAGV-DVDVYERSPQ   38 (265)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSSSS
T ss_pred             CCcEEEECc-CHHHHHHHHHHHHCCC-CEEEEeCCCC
Confidence            479999999 9999999999999999 8999987654

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.88  E-value=0.028  Score=47.55  Aligned_cols=38  Identities=24%  Similarity=0.188  Sum_probs=30.8

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCC
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG   44 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   44 (278)
                      .+...+|+|.|+ |++|.++++-|...|...+++++.+.
T Consensus        22 ~L~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d~   59 (529)
T d1yova1          22 ALESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGNQ   59 (529)
T ss_dssp             HHHHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCSB
T ss_pred             HHhCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCCc
Confidence            344569999998 78999999999999987787776533

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=93.85  E-value=0.014  Score=43.53  Aligned_cols=37  Identities=24%  Similarity=0.187  Sum_probs=31.3

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCC
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG   44 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   44 (278)
                      ++++|+|+|-|- |-+|+++++.|.+.|. .|++.+.+.
T Consensus        36 ~l~g~~v~IqG~-GnVG~~~a~~L~~~Ga-kvv~~d~~~   72 (230)
T d1leha1          36 SLEGLAVSVQGL-GNVAKALCKKLNTEGA-KLVVTDVNK   72 (230)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSCH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCC-EEEeecccH
Confidence            577899999977 9999999999999999 777665443

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=93.79  E-value=0.04  Score=39.11  Aligned_cols=33  Identities=18%  Similarity=0.332  Sum_probs=26.9

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEec
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVF   42 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r   42 (278)
                      ..++|+|.|| |++|-+++..|.+.|. ++..+.+
T Consensus         2 ~~~~VvIIGg-G~~G~e~A~~l~~~g~-~v~v~~~   34 (185)
T d1q1ra1           2 ANDNVVIVGT-GLAGVEVAFGLRASGW-EGNIRLV   34 (185)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEE
T ss_pred             CCCCEEEECC-cHHHHHHHHHHHHcCC-ceEEEEe
Confidence            3578999988 9999999999999998 5544443

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=93.68  E-value=0.046  Score=37.76  Aligned_cols=35  Identities=20%  Similarity=0.290  Sum_probs=28.8

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCC--CCeEEEEecCC
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNN--YTSINATVFPG   44 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g--~~~v~~~~r~~   44 (278)
                      ||+|.|.|+||-||...++-+.+..  + +|.++.-..
T Consensus         1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f-~v~~Lsa~~   37 (151)
T d1q0qa2           1 MKQLTILGSTGSIGCSTLDVVRHNPEHF-RVVALVAGK   37 (151)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTTE-EEEEEEESS
T ss_pred             CCeEEEEcCCcHHHHHHHHHHHhCCCCc-EEEEEEecC
Confidence            6899999999999999999888763  4 777776543

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=93.64  E-value=0.013  Score=41.96  Aligned_cols=42  Identities=17%  Similarity=0.170  Sum_probs=33.0

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCccc
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL   50 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~   50 (278)
                      +.++|+|||.|+ |+.++.++..|.+.|  .|.+..|+.++.+.+
T Consensus        15 ~~~~k~vlIlGa-GG~arai~~aL~~~~--~i~I~nR~~~ka~~l   56 (177)
T d1nvta1          15 RVKDKNIVIYGA-GGAARAVAFELAKDN--NIIIANRTVEKAEAL   56 (177)
T ss_dssp             CCCSCEEEEECC-SHHHHHHHHHHTSSS--EEEEECSSHHHHHHH
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHcccc--ceeeehhhhhHHHHH
Confidence            457899999988 789999999986554  788888877665443

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=93.64  E-value=0.047  Score=37.68  Aligned_cols=36  Identities=31%  Similarity=0.354  Sum_probs=29.4

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHC--CCCeEEEEecCC
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDN--NYTSINATVFPG   44 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~--g~~~v~~~~r~~   44 (278)
                      ++|+|.|.|+||-||...++-+.+.  .+ +|.++.-..
T Consensus         1 ~pK~I~IlGsTGSIG~~tL~Vi~~~~d~f-~v~~lsa~~   38 (150)
T d1r0ka2           1 QPRTVTVLGATGSIGHSTLDLIERNLDRY-QVIALTANR   38 (150)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTGGGE-EEEEEEESS
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHcCCCCc-EEEEEEeCC
Confidence            4689999999999999999988775  45 777776543

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=93.58  E-value=0.0012  Score=47.11  Aligned_cols=116  Identities=11%  Similarity=0.066  Sum_probs=60.2

Q ss_pred             ceEEEeCcchhhHH-HHHHHHHHCCC----CeEEEEecCCCCCcccccCCC----CCCCceEEEEccCCChhhHHHHhcC
Q 023689           10 ETVCVTGANGFIGT-WLVKTLLDNNY----TSINATVFPGSDSSHLFALPG----AGDANLRVFEADVLDSGAVSRAVEG   80 (278)
Q Consensus        10 ~~vlItGatG~iG~-~l~~~L~~~g~----~~v~~~~r~~~~~~~~~~~~~----~~~~~v~~~~~Dl~d~~~~~~~~~~   80 (278)
                      .||.|.||++ +|. .++..|+..-.    .++++.+.++++.+.......    ......++.     -..+..+++++
T Consensus         4 ~KI~iIGaGs-v~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~d~~eal~~   77 (167)
T d1u8xx1           4 FSIVIAGGGS-TFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFA-----ATTDPEEAFTD   77 (167)
T ss_dssp             EEEEEECTTS-SSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEE-----EESCHHHHHSS
T ss_pred             ceEEEECCCh-hhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceE-----ecCChhhccCC
Confidence            5899999954 454 34455554311    378888776654332111000    000011111     11246788899


Q ss_pred             ccEEEEecccCCCCCCCCchhhh------------------hhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           81 CKGVFHVASPCTLEDPVDPEKEL------------------ILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        81 ~d~vi~~a~~~~~~~~~~~~~~~------------------~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      +|+||..|+......+..+....                  ...|+.....+.+..++.....++..-|
T Consensus        78 AD~Vvitag~~~~~g~~rd~~i~~~~Gi~~~~t~g~gg~~~~~r~i~ii~~i~~~i~~~~P~A~li~~T  146 (167)
T d1u8xx1          78 VDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYS  146 (167)
T ss_dssp             CSEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             CCEEEECCCcCCCCceeHHHhhchhcCceeeccccCcchheehhhHHHHHHHHHHHHhhCCCeEEEEeC
Confidence            99999999874432111111111                  1134555667777777777655555554

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.55  E-value=0.054  Score=40.31  Aligned_cols=38  Identities=24%  Similarity=0.407  Sum_probs=32.9

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCC
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD   46 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~   46 (278)
                      .+.|+|+|+|| |..|-..+..|.+.|+ +|+++.+++..
T Consensus        47 ~~~k~VvIIGa-GpAGl~aA~~l~~~G~-~v~l~E~~~~~   84 (233)
T d1djqa3          47 KNKDSVLIVGA-GPSGSEAARVLMESGY-TVHLTDTAEKI   84 (233)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSSSST
T ss_pred             cCCceEEEEcc-cHHHHHHHHHHHHhcc-ceeeEeecccc
Confidence            35689999998 9999999999999999 89888776644

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=93.40  E-value=0.035  Score=43.16  Aligned_cols=37  Identities=14%  Similarity=0.083  Sum_probs=31.5

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCC
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS   47 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~   47 (278)
                      |..|+|+|| |.-|..+|++|.+.|+ .|.++.+++...
T Consensus         1 M~dv~IIGa-G~sGl~~A~~L~~~g~-~V~iiEk~~~iG   37 (298)
T d1i8ta1           1 MYDYIIVGS-GLFGAVCANELKKLNK-KVLVIEKRNHIG   37 (298)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHGGGTC-CEEEECSSSSSS
T ss_pred             CccEEEECC-cHHHHHHHHHHHhCCC-cEEEEECCCCcc
Confidence            568999998 9999999999999998 888887765443

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=93.39  E-value=0.046  Score=43.10  Aligned_cols=36  Identities=25%  Similarity=0.276  Sum_probs=30.2

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCC-CeEEEEecCCC
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGS   45 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~~   45 (278)
                      ||+|+|+|| |.-|-..+..|+++|. .+|+++.|+..
T Consensus         4 ~KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~~   40 (335)
T d2gv8a1           4 IRKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRGS   40 (335)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred             CCeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence            579999998 9999999999998763 38888888654

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.35  E-value=0.032  Score=42.92  Aligned_cols=34  Identities=21%  Similarity=0.101  Sum_probs=29.9

Q ss_pred             Cc-eEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCC
Q 023689            9 EE-TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG   44 (278)
Q Consensus         9 ~~-~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   44 (278)
                      || +|+|.|| |-.|..++..|.+.|+ +|.++.+++
T Consensus         1 mk~~V~IvGa-Gp~Gl~~A~~L~~~G~-~v~vlE~~~   35 (292)
T d1k0ia1           1 MKTQVAIIGA-GPSGLLLGQLLHKAGI-DNVILERQT   35 (292)
T ss_dssp             CBCSEEEECC-SHHHHHHHHHHHHHTC-CEEEECSSC
T ss_pred             CCCCEEEECc-CHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence            34 6999999 8999999999999999 888887765

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=93.30  E-value=0.046  Score=42.66  Aligned_cols=38  Identities=16%  Similarity=0.191  Sum_probs=32.6

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCC
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS   45 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~   45 (278)
                      ..+.|+|+|+|| |..|...+..|.++|+ +|.++.+++.
T Consensus        27 ~~~pkkV~IIGa-G~aGLsaA~~L~~~G~-~V~vlE~~~~   64 (370)
T d2iida1          27 TSNPKHVVIVGA-GMAGLSAAYVLAGAGH-QVTVLEASER   64 (370)
T ss_dssp             CSSCCEEEEECC-BHHHHHHHHHHHHHTC-EEEEECSSSS
T ss_pred             CCCCCeEEEECC-CHHHHHHHHHHHHCCC-CEEEEeCCCC
Confidence            345689999998 9999999999999999 8998877654

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=93.14  E-value=0.041  Score=42.19  Aligned_cols=34  Identities=18%  Similarity=0.146  Sum_probs=30.2

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCC
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS   45 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~   45 (278)
                      |+|+|+|| |.-|...+..|.+.|+ +|+++-+++.
T Consensus         1 m~V~IIGa-G~aGL~aA~~L~~~G~-~V~vlE~~~~   34 (347)
T d2ivda1           1 MNVAVVGG-GISGLAVAHHLRSRGT-DAVLLESSAR   34 (347)
T ss_dssp             CCEEEECC-BHHHHHHHHHHHTTTC-CEEEECSSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCC-CEEEEecCCC
Confidence            57999999 9999999999999999 8988877654

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=92.89  E-value=0.083  Score=36.56  Aligned_cols=35  Identities=20%  Similarity=0.084  Sum_probs=30.1

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCC
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG   44 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   44 (278)
                      +++|+|+|| |..|...+..+.+.|++.|+.+.|++
T Consensus        45 ~~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr~   79 (153)
T d1gtea3          45 RGAVIVLGA-GDTAFDCATSALRCGARRVFLVFRKG   79 (153)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred             CCEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeCC
Confidence            468999988 99999999999999987787777654

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=92.86  E-value=0.058  Score=38.94  Aligned_cols=34  Identities=24%  Similarity=0.084  Sum_probs=27.3

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCC-CeEEEEecCC
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPG   44 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~-~~v~~~~r~~   44 (278)
                      |||+|.|| |++|-.++..|.+.+. .+|+.+.|++
T Consensus         1 ~KVvIIGg-G~~G~e~A~~l~~~~~~~~V~v~~~~~   35 (198)
T d1nhpa1           1 MKVIVLGS-SHGGYEAVEELLNLHPDAEIQWYEKGD   35 (198)
T ss_dssp             CEEEEECS-SHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred             CEEEEECC-cHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence            58999998 8999999999988643 2677776654

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=92.82  E-value=0.17  Score=35.68  Aligned_cols=74  Identities=16%  Similarity=0.181  Sum_probs=43.2

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCc--ccccCCCCCCCceEEEEccC-----------CChhhHHH
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS--HLFALPGAGDANLRVFEADV-----------LDSGAVSR   76 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~~~~Dl-----------~d~~~~~~   76 (278)
                      +||.|-|- |-||+.+++.+.++..-+++++....+...  .+...      +...+..+-           .....+.+
T Consensus         3 irIaINGf-GRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (172)
T d2czca2           3 VKVGVNGY-GTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKEL------GIPVYAASEEFIPRFEKEGFEVAGTLND   75 (172)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHT------TCCEEESSGGGHHHHHHHTCCCSCBHHH
T ss_pred             EEEEEECC-CHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhhc------CceeecccccceeeecccCccccchhhh
Confidence            58999986 999999999998765436665543221111  11111      111221111           11224555


Q ss_pred             HhcCccEEEEeccc
Q 023689           77 AVEGCKGVFHVASP   90 (278)
Q Consensus        77 ~~~~~d~vi~~a~~   90 (278)
                      +.+++|+|+-|.|.
T Consensus        76 ~~~~vDvViEcTG~   89 (172)
T d2czca2          76 LLEKVDIIVDATPG   89 (172)
T ss_dssp             HHTTCSEEEECCST
T ss_pred             hhccCCEEEECCCC
Confidence            56789999999876

>d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Thermotoga maritima [TaxId: 2336]

Probab=92.47  E-value=0.84  Score=32.57  Aligned_cols=96  Identities=13%  Similarity=0.144  Sum_probs=58.9

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEcc-C------------------CC
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEAD-V------------------LD   70 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D-l------------------~d   70 (278)
                      +||.|.|- |+-|..++..|.+.|.+.|-.+.-+.+. ..+.....    ..++..+. +                  .+
T Consensus         1 ~kI~viGv-GGaG~n~v~~l~~~~~~~v~~iainTD~-~~L~~~~a----~~ki~iG~~~t~G~G~g~~p~~g~~aa~e~   74 (194)
T d1w5fa1           1 LKIKVIGV-GGAGNNAINRMIEIGIHGVEFVAVNTDL-QVLEASNA----DVKIQIGENITRGLGAGGRPEIGEQAALES   74 (194)
T ss_dssp             CCEEEEEE-HHHHHHHHHHHHHHCCTTEEEEEEESCH-HHHHTCCC----SEEEECCTTTTTTSCCTTCHHHHHHHHHHT
T ss_pred             CeEEEEEe-CchHHHHHHHHHHcCCCceEEEEEcCCH-HHHhcCCc----ceEEecccccCCCcccccCchhhHhHHHHH
Confidence            47889988 8899999999998876444333322221 11221110    22222221 1                  13


Q ss_pred             hhhHHHHhcCccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCC
Q 023689           71 SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV  123 (278)
Q Consensus        71 ~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~  123 (278)
                      .+.+.+.++++|.||-+||.....            -.-++-.+.+.|++.+.
T Consensus        75 ~~~I~~~l~~~d~vfi~AGlGGgT------------GtgaapviA~~ake~g~  115 (194)
T d1w5fa1          75 EEKIREVLQDTHMVFITAGFGGGT------------GTGASPVIAKIAKEMGI  115 (194)
T ss_dssp             HHHHHHHTTTCSEEEEEEETTSSH------------HHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHhcCCCeEEEEEecCCCc------------ccchHHHHHHHHHHcCC
Confidence            456777888999999999986641            13345568888998875

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=92.43  E-value=0.065  Score=41.40  Aligned_cols=34  Identities=24%  Similarity=0.405  Sum_probs=29.3

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCC
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG   44 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   44 (278)
                      .+|+|+|| |.+|..++..|.++|.++|+++.|+.
T Consensus         2 ~dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           2 PRIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CCEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            36999998 99999999999999964788887764

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=92.01  E-value=0.04  Score=38.47  Aligned_cols=35  Identities=34%  Similarity=0.502  Sum_probs=23.0

Q ss_pred             ceEEEeCcchhhHHHHH-HHHHHCCCCeEEEEe-cCCC
Q 023689           10 ETVCVTGANGFIGTWLV-KTLLDNNYTSINATV-FPGS   45 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~-~~L~~~g~~~v~~~~-r~~~   45 (278)
                      .|+-|.| +|.+|+.+. +.|......+++++. |+.+
T Consensus         5 irvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~   41 (157)
T d1nvmb1           5 LKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAA   41 (157)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTT
T ss_pred             cEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchh
Confidence            5899999 899998755 544444443666664 4443

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=91.97  E-value=0.14  Score=33.34  Aligned_cols=35  Identities=9%  Similarity=0.106  Sum_probs=28.1

Q ss_pred             CceEEEeCcchhhHHHHHHHHHH---CCCCeEEEEecCCC
Q 023689            9 EETVCVTGANGFIGTWLVKTLLD---NNYTSINATVFPGS   45 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~---~g~~~v~~~~r~~~   45 (278)
                      .++++|.|| |++|-+++..|.+   .|. +|..+.|.+.
T Consensus        18 p~~v~IiGg-G~ig~E~A~~l~~~~~~g~-~Vtli~~~~~   55 (117)
T d1feca2          18 PKRALCVGG-GYISIEFAGIFNAYKARGG-QVDLAYRGDM   55 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHSCTTC-EEEEEESSSS
T ss_pred             CCeEEEECC-ChHHHHHHHHhHhhccccc-ccceeccccc
Confidence            479999998 9999999976554   477 8888887654

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=91.89  E-value=0.36  Score=35.89  Aligned_cols=35  Identities=20%  Similarity=0.334  Sum_probs=28.7

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHC-CCCeEEEEec
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDN-NYTSINATVF   42 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~-g~~~v~~~~r   42 (278)
                      .+++|+|.|-|- |-+|+++++.|.++ |. .|+++.-
T Consensus        29 ~l~g~~v~IqGf-GnVG~~~a~~L~~~~G~-kvv~vsD   64 (239)
T d1gtma1          29 TLKGKTIAIQGY-GNAGYYLAKIMSEDFGM-KVVAVSD   64 (239)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCC-EEEEEEC
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHhcCc-ceeeccc
Confidence            467899999987 99999999999865 88 7776654

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=91.85  E-value=0.11  Score=34.07  Aligned_cols=35  Identities=14%  Similarity=0.119  Sum_probs=27.1

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHC---CCCeEEEEecCCC
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDN---NYTSINATVFPGS   45 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~---g~~~v~~~~r~~~   45 (278)
                      .++++|.|| |++|-+++..|.+.   |. +|+.+.+.+.
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~-~Vtli~~~~~   57 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDG-QVTLCYRGEM   57 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTC-EEEEEESSSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCc-EEEEEeccch
Confidence            479999999 99999999766544   45 7888877553

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.72  E-value=0.41  Score=36.72  Aligned_cols=28  Identities=18%  Similarity=0.154  Sum_probs=23.9

Q ss_pred             chhhHHHHHHHHHHCCCCeEEEEecCCCC
Q 023689           18 NGFIGTWLVKTLLDNNYTSINATVFPGSD   46 (278)
Q Consensus        18 tG~iG~~l~~~L~~~g~~~v~~~~r~~~~   46 (278)
                      ||-.|.+|++.++.+|+ .|+.+.+....
T Consensus        45 SGk~G~alA~~~~~~Ga-~V~li~g~~s~   72 (290)
T d1p9oa_          45 SGRRGATSAEAFLAAGY-GVLFLYRARSA   72 (290)
T ss_dssp             CCHHHHHHHHHHHHTTC-EEEEEEETTSC
T ss_pred             chHHHHHHHHHHHHcCC-EEEEEecCCcc
Confidence            68999999999999999 88888765443

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.68  E-value=0.12  Score=38.90  Aligned_cols=35  Identities=14%  Similarity=0.122  Sum_probs=30.1

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCC
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS   45 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~   45 (278)
                      ++|+|+|| |..|..++..|.+.|.+.|.++.+++.
T Consensus         2 ~~V~IvGa-G~aGl~~A~~L~~~Gi~~V~V~Er~~~   36 (288)
T d3c96a1           2 IDILIAGA-GIGGLSCALALHQAGIGKVTLLESSSE   36 (288)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence            58999999 999999999999999548888877654

>d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=91.54  E-value=0.87  Score=32.90  Aligned_cols=97  Identities=13%  Similarity=0.158  Sum_probs=58.8

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccC-------------------CC
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADV-------------------LD   70 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl-------------------~d   70 (278)
                      .||.|.|- |+-|..++..|.+.|.+.|-.+.-+.+. ..+.....    ..++..+.-                   .+
T Consensus        16 ~ki~ViGv-GGaG~n~v~~l~~~~~~~v~~iainTD~-~~L~~~~~----~~ki~ig~~~t~g~Gag~~p~~g~~aa~e~   89 (209)
T d2vapa1          16 AKITVVGC-GGAGNNTITRLKMEGIEGAKTVAINTDA-QQLIRTKA----DKKILIGKKLTRGLGAGGNPKIGEEAAKES   89 (209)
T ss_dssp             CCEEEEEE-HHHHHHHHHHHHHHTCTTEEEEEEESBH-HHHHTSCC----SEEEECCTTTTTTBCCTTCHHHHHHHHHHT
T ss_pred             CcEEEEEe-CChHHHHHHHHHHcCCCceEEEEEeCCH-HHHhcCCc----chhcccccccccccccccchHHHHHHHHHH
Confidence            58999988 8899999999999876444333322211 11111100    111211111                   23


Q ss_pred             hhhHHHHhcCccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCC
Q 023689           71 SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR  124 (278)
Q Consensus        71 ~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~  124 (278)
                      .+.+.+.++++|.||-+||.....            -.-++..+.+.+++.+.-
T Consensus        90 ~~~I~~~l~~~d~vfi~AGlGGGT------------Gsgaapvia~~ake~g~l  131 (209)
T d2vapa1          90 AEEIKAAIQDSDMVFITCGLGGGT------------GTGSAPVVAEISKKIGAL  131 (209)
T ss_dssp             HHHHHHHHTTCSEEEEEEETTSSH------------HHHHHHHHHHHHHHTTCE
T ss_pred             HHHHHHhccCCCEEEEEEeCCCCc------------cccHHHHHHHHHHHcCCc
Confidence            357888889999999999986641            123345678888888753

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=91.45  E-value=0.1  Score=38.95  Aligned_cols=35  Identities=26%  Similarity=0.245  Sum_probs=29.6

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCC
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS   45 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~   45 (278)
                      ++|+|+|| |.-|...+..|.+.|+++|+++.+++.
T Consensus         1 P~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~~   35 (347)
T d1b5qa1           1 PRVIVVGA-GMSGISAAKRLSEAGITDLLILEATDH   35 (347)
T ss_dssp             CCEEEECC-BHHHHHHHHHHHHTTCCCEEEECSSSS
T ss_pred             CCEEEECC-cHHHHHHHHHHHhCCCCcEEEEECCCC
Confidence            47999998 999999999999999646888877553

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=91.35  E-value=0.088  Score=37.10  Aligned_cols=116  Identities=12%  Similarity=0.067  Sum_probs=63.0

Q ss_pred             ceEEEeCcc-hhhHHHHHHHHHHCC---CCeEEEEecCCCC--CcccccC-----CCCCCCceEEEEccCCChhhHHHHh
Q 023689           10 ETVCVTGAN-GFIGTWLVKTLLDNN---YTSINATVFPGSD--SSHLFAL-----PGAGDANLRVFEADVLDSGAVSRAV   78 (278)
Q Consensus        10 ~~vlItGat-G~iG~~l~~~L~~~g---~~~v~~~~r~~~~--~~~~~~~-----~~~~~~~v~~~~~Dl~d~~~~~~~~   78 (278)
                      +||.|+||+ .+.+..++..+....   ..++...+.+++.  .+.+...     ...   +..   ..+....+..+++
T Consensus         2 ~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~---~~~---~~~~~~td~~~al   75 (169)
T d1s6ya1           2 LKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKA---GVP---IEIHLTLDRRRAL   75 (169)
T ss_dssp             EEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHT---TCC---CEEEEESCHHHHH
T ss_pred             cEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhc---CCC---ceeeecCCchhhc
Confidence            588999973 345555555444331   1377777765532  1111100     000   111   1111223346778


Q ss_pred             cCccEEEEecccCCCCCCCCch------------------hhhhhhHHhHHHHHHHHHHhcCCCEEEEecc
Q 023689           79 EGCKGVFHVASPCTLEDPVDPE------------------KELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (278)
Q Consensus        79 ~~~d~vi~~a~~~~~~~~~~~~------------------~~~~~~n~~~~~~ll~~~~~~~~~~~v~~Ss  131 (278)
                      +++|+||..|+....+.+..+.                  ......|+.....+.+.++++....++.+-|
T Consensus        76 ~gaDvVv~ta~~~~~~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~~pda~~i~vt  146 (169)
T d1s6ya1          76 DGADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFT  146 (169)
T ss_dssp             TTCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             CCCCEEEEccccCCCCCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhcCCCeEEEEeC
Confidence            9999999999865431111111                  1123457777888888888887676666665

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.18  E-value=0.13  Score=34.65  Aligned_cols=35  Identities=17%  Similarity=0.230  Sum_probs=27.9

Q ss_pred             CceEEEeCcchhhHHHHHHHHH----HCCCCeEEEEecCCC
Q 023689            9 EETVCVTGANGFIGTWLVKTLL----DNNYTSINATVFPGS   45 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~----~~g~~~v~~~~r~~~   45 (278)
                      .++++|.|| |++|-+++..|.    +.|. +|+.+.+.+.
T Consensus        37 ~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~-~Vt~i~~~~~   75 (137)
T d1m6ia2          37 VKSITIIGG-GFLGSELACALGRKARALGT-EVIQLFPEKG   75 (137)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHHHHHTC-EEEEECSSSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHHHhcCC-EEEEeccccc
Confidence            578999988 999999998885    3577 8887776553

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=91.15  E-value=0.14  Score=38.26  Aligned_cols=35  Identities=26%  Similarity=0.305  Sum_probs=30.3

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEec
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVF   42 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r   42 (278)
                      ++++++|+|-|- |-+|+++++.|.+.|. .|+++.-
T Consensus        28 ~l~g~~v~IqGf-GnVG~~~a~~L~~~Ga-kvv~vsD   62 (242)
T d1v9la1          28 GIEGKTVAIQGM-GNVGRWTAYWLEKMGA-KVIAVSD   62 (242)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTC-EEEEEEC
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCC-eEEEeec
Confidence            467899999975 9999999999999999 7776654

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=91.05  E-value=0.022  Score=42.50  Aligned_cols=24  Identities=29%  Similarity=0.310  Sum_probs=22.7

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCC
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNY   34 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~   34 (278)
                      |||+|+|| |-+|...+.+|.++|+
T Consensus         1 mkV~VIGa-Gi~GlstA~~L~~~G~   24 (246)
T d1kifa1           1 MRVVVIGA-GVIGLSTALCIHERYH   24 (246)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHHT
T ss_pred             CEEEEECc-hHHHHHHHHHHHHCCC
Confidence            58999999 9999999999999998

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=90.91  E-value=0.2  Score=34.41  Aligned_cols=37  Identities=11%  Similarity=0.058  Sum_probs=29.1

Q ss_pred             CceEEEe-CcchhhHHHHHHHHHHCCCCeEEEEecCCCC
Q 023689            9 EETVCVT-GANGFIGTWLVKTLLDNNYTSINATVFPGSD   46 (278)
Q Consensus         9 ~~~vlIt-GatG~iG~~l~~~L~~~g~~~v~~~~r~~~~   46 (278)
                      ++.++|. .++||||.+++..|.+.|+ +|+.+.+.+..
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~G~-~Vtlv~~~~~~   76 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATAGH-EVTIVSGVHLA   76 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHTTC-EEEEEESSCTT
T ss_pred             CCceEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcc
Confidence            3455554 3559999999999999999 89999886543

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=90.69  E-value=0.13  Score=39.15  Aligned_cols=31  Identities=23%  Similarity=0.072  Sum_probs=27.8

Q ss_pred             EEEeCcchhhHHHHHHHHHHCCCCeEEEEecCC
Q 023689           12 VCVTGANGFIGTWLVKTLLDNNYTSINATVFPG   44 (278)
Q Consensus        12 vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   44 (278)
                      |+|+|| |..|..++.+|.++|+ +|+++.+..
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~-~V~viE~~~   36 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGV-KTLLVDAFD   36 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTC-CEEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence            899988 9999999999999999 888887754

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=90.57  E-value=0.14  Score=35.42  Aligned_cols=31  Identities=26%  Similarity=0.265  Sum_probs=25.5

Q ss_pred             eEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCC
Q 023689           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG   44 (278)
Q Consensus        11 ~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   44 (278)
                      ||+|.|| |++|-+++..|. ++. +|+.+.+.+
T Consensus         2 rVvIIGg-G~~G~e~A~~l~-~~~-~Vtvv~~~~   32 (167)
T d1xhca1           2 KVVIVGN-GPGGFELAKQLS-QTY-EVTVIDKEP   32 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHT-TTS-EEEEECSSS
T ss_pred             eEEEECC-cHHHHHHHHHHH-cCC-CEEEEeccc
Confidence            7999998 999999999885 477 788776644

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=90.51  E-value=0.66  Score=34.24  Aligned_cols=34  Identities=21%  Similarity=0.300  Sum_probs=28.0

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHH-CCCCeEEEEe
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLD-NNYTSINATV   41 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~-~g~~~v~~~~   41 (278)
                      ++++++|.|-|- |-+|+++++.|.+ .|. .|+++.
T Consensus        28 ~l~g~~vaIqG~-GnVG~~~a~~L~~e~Ga-~vv~vs   62 (234)
T d1b26a1          28 DPKKATVAVQGF-GNVGQFAALLISQELGS-KVVAVS   62 (234)
T ss_dssp             CTTTCEEEEECC-SHHHHHHHHHHHHHHCC-EEEEEE
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHhcCC-ceEEee
Confidence            567899999975 9999999999975 598 776665

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.90  E-value=0.22  Score=38.66  Aligned_cols=35  Identities=14%  Similarity=0.157  Sum_probs=30.2

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCC
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS   45 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~   45 (278)
                      -+||+|+|| |.-|-..+..|.+.|+ +|+++-+++.
T Consensus         5 ~~kViVIGa-G~aGL~aA~~L~~~G~-~V~VlEa~~r   39 (449)
T d2dw4a2           5 TGKVIIIGS-GVSGLAAARQLQSFGM-DVTLLEARDR   39 (449)
T ss_dssp             CCEEEEECC-BHHHHHHHHHHHHTTC-EEEEECSSSS
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCCC-CEEEEeCCCC
Confidence            368999998 9999999999999999 8888866543

>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=89.79  E-value=0.089  Score=37.30  Aligned_cols=29  Identities=31%  Similarity=0.339  Sum_probs=23.8

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEE
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINAT   40 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~   40 (278)
                      .+|+|.|| |++|-+++..|.+.|. ++.++
T Consensus         4 a~VvIIGg-G~~G~e~A~~l~~~g~-~v~i~   32 (183)
T d1d7ya1           4 APVVVLGA-GLASVSFVAELRQAGY-QGLIT   32 (183)
T ss_dssp             SSEEEECC-SHHHHHHHHHHHHHTC-CSCEE
T ss_pred             CCEEEECc-cHHHHHHHHHHHhcCC-ceEEE
Confidence            36999997 9999999999999987 44333

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=89.46  E-value=0.19  Score=37.85  Aligned_cols=35  Identities=17%  Similarity=0.023  Sum_probs=30.1

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEec
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVF   42 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r   42 (278)
                      +++++++.|-|- |-+|+++++.|.+.|. .|+++.-
T Consensus        33 ~l~g~~v~IQGf-GnVG~~~a~~L~e~Ga-kvvavsD   67 (255)
T d1bgva1          33 TLVGKTVALAGF-GNVAWGAAKKLAELGA-KAVTLSG   67 (255)
T ss_dssp             CSTTCEEEECCS-SHHHHHHHHHHHHHTC-EEEEEEE
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCC-eEEEEec
Confidence            467899999985 9999999999999999 7776643

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.34  E-value=0.19  Score=36.97  Aligned_cols=32  Identities=19%  Similarity=0.085  Sum_probs=28.5

Q ss_pred             EEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCC
Q 023689           12 VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS   45 (278)
Q Consensus        12 vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~   45 (278)
                      |+|+|| |.-|...|..|.+.|+ +|.++.+++.
T Consensus         8 viViGa-G~~Gl~~A~~La~~G~-~V~vlE~~~~   39 (297)
T d2bcgg1           8 VIVLGT-GITECILSGLLSVDGK-KVLHIDKQDH   39 (297)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTC-CEEEECSSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCC-CEEEEcCCCC
Confidence            899987 9999999999999999 8988877654

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=89.33  E-value=0.68  Score=33.33  Aligned_cols=75  Identities=16%  Similarity=0.182  Sum_probs=42.3

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcc------cccCCCCCCCceEEEE-ccCCChhhHHHHhc--C
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSH------LFALPGAGDANLRVFE-ADVLDSGAVSRAVE--G   80 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~------~~~~~~~~~~~v~~~~-~Dl~d~~~~~~~~~--~   80 (278)
                      |||++.|. +..|..+++.|++.|+ +|.++...+++...      +..+-.  ..++.++. .++.+++.+ +.++  +
T Consensus         1 Mkiv~~~~-~~~g~~~l~~L~~~g~-~I~~Vvt~~~~~~~~~~~~~~~~~a~--~~~i~~~~~~~~~~~~~~-~~i~~~~   75 (203)
T d2blna2           1 MKTVVFAY-HDMGCLGIEALLAAGY-EISAIFTHTDNPGEKAFYGSVARLAA--ERGIPVYAPDNVNHPLWV-ERIAQLS   75 (203)
T ss_dssp             CEEEEEEC-HHHHHHHHHHHHHTTC-EEEEEECCCC------CCCCHHHHHH--HHTCCEECCSCCCSHHHH-HHHHHTC
T ss_pred             CeEEEEec-CHHHHHHHHHHHHCCC-CEEEEEcCCCCCCcccccCHHHHHHH--HcCCcceecccccchhhh-hhhhhhc
Confidence            46777755 6689999999999999 77666543322110      000000  00344443 556565544 4443  6


Q ss_pred             ccEEEEecc
Q 023689           81 CKGVFHVAS   89 (278)
Q Consensus        81 ~d~vi~~a~   89 (278)
                      +|+++....
T Consensus        76 ~Dlii~~g~   84 (203)
T d2blna2          76 PDVIFSFYY   84 (203)
T ss_dssp             CSEEEEESC
T ss_pred             ccceeeeec
Confidence            898887653

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=88.98  E-value=0.32  Score=33.70  Aligned_cols=100  Identities=13%  Similarity=0.120  Sum_probs=51.7

Q ss_pred             ceEEEeCcchhhHHH-HHHHHHHC-CCCeEEEEe-cCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689           10 ETVCVTGANGFIGTW-LVKTLLDN-NYTSINATV-FPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus        10 ~~vlItGatG~iG~~-l~~~L~~~-g~~~v~~~~-r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      ++|.|.|. |.+|+. .+..|... +. +++++. ++.+.........     +     .+..  +.+.++.+++|+|+-
T Consensus         2 iri~iIG~-G~~g~~~~~~~l~~~~~~-~i~~v~d~~~~~~~~~~~~~-----~-----~~~~--~~~~~l~~~~D~V~I   67 (164)
T d1tlta1           2 LRIGVVGL-GGIAQKAWLPVLAAASDW-TLQGAWSPTRAKALPICESW-----R-----IPYA--DSLSSLAASCDAVFV   67 (164)
T ss_dssp             EEEEEECC-STHHHHTHHHHHHSCSSE-EEEEEECSSCTTHHHHHHHH-----T-----CCBC--SSHHHHHTTCSEEEE
T ss_pred             CEEEEEcC-CHHHHHHHHHHHHhCCCc-EEEEEEechhHhhhhhhhcc-----c-----cccc--ccchhhhhhcccccc
Confidence            47899985 889975 45666554 55 565554 5554433322110     1     1222  345566688999886


Q ss_pred             ecccCCC--------CC-CCCchhhhhhhHHhHHHHHHHHHHhcCC
Q 023689           87 VASPCTL--------ED-PVDPEKELILPAVQGTLNVLEAAKRFGV  123 (278)
Q Consensus        87 ~a~~~~~--------~~-~~~~~~~~~~~n~~~~~~ll~~~~~~~~  123 (278)
                      +......        .. ..--.+.-+..|..-...+++++++.++
T Consensus        68 ~tp~~~h~~~~~~al~~gk~V~~EKPla~~~~e~~~l~~~a~~~~~  113 (164)
T d1tlta1          68 HSSTASHFDVVSTLLNAGVHVCVDKPLAENLRDAERLVELAARKKL  113 (164)
T ss_dssp             CSCTTHHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTC
T ss_pred             cccchhccccccccccccceeeccccccCCHHHHHHHHHHHHHcCC
Confidence            6421110        00 0000011133445556677788877764

>d1ofua1 c.32.1.1 (A:11-208) Cell-division protein FtsZ {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.92  E-value=2.8  Score=29.76  Aligned_cols=95  Identities=20%  Similarity=0.179  Sum_probs=57.8

Q ss_pred             eEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEcc-C------------------CCh
Q 023689           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEAD-V------------------LDS   71 (278)
Q Consensus        11 ~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D-l------------------~d~   71 (278)
                      +|.|.|- |+-|..++..|.+.+...|-.+.-+.+. ..+.....    ..++..++ +                  .+.
T Consensus         3 ~IkViGv-GGaG~n~v~~~~~~~~~~v~~iainTD~-~~L~~~~~----~~ki~iG~~~~~g~G~gg~p~~g~~aa~e~~   76 (198)
T d1ofua1           3 VIKVIGV-GGGGGNAVNHMAKNNVEGVEFICANTDA-QALKNIAA----RTVLQLGPGVTKGLGAGANPEVGRQAALEDR   76 (198)
T ss_dssp             CEEEEEE-HHHHHHHHHHHHHTTCCSEEEEEEESBT-GGGSSCSC----SEEEECCHHHHTTBCCCSCHHHHHHHHHHTH
T ss_pred             eEEEEEE-CchHHHHHHHHHHcCCCCeEEEEEeCcH-HHHhcCCc----cceeccccccccCCCCCCChHHHHHHHHHHH
Confidence            5778877 8899999999999876444333332221 11211110    12222221 1                  134


Q ss_pred             hhHHHHhcCccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCC
Q 023689           72 GAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV  123 (278)
Q Consensus        72 ~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~  123 (278)
                      +.+.+.+++.|.||-+||.....            -.-++-.+.+.|++.+.
T Consensus        77 ~~I~~~l~~~d~vfi~AGlGGGT------------GtgaapviA~~ake~g~  116 (198)
T d1ofua1          77 ERISEVLEGADMVFITTGMGGGT------------GTGAAPIIAEVAKEMGI  116 (198)
T ss_dssp             HHHHHHHTTCSEEEEEEETTSSH------------HHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHhCCCCeEEEEecCCCCc------------cccHHHHHHHHHHHcCC
Confidence            66788888999999999986641            12345568888998875

>d1rq2a1 c.32.1.1 (A:8-205) Cell-division protein FtsZ {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=88.69  E-value=2.4  Score=30.12  Aligned_cols=96  Identities=16%  Similarity=0.197  Sum_probs=58.3

Q ss_pred             eEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEc-----------c--------CCCh
Q 023689           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEA-----------D--------VLDS   71 (278)
Q Consensus        11 ~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~-----------D--------l~d~   71 (278)
                      +|-|.|- |+-|..++..|.+.+.+.|-.+.-+.+.. .+.....    ..++..+           |        ..+.
T Consensus         3 ~IkViGv-GGaG~n~vn~~~~~~~~~v~~iainTD~~-~L~~~~~----~~ki~iG~~~t~G~Gagg~p~~g~~aa~e~~   76 (198)
T d1rq2a1           3 VIKVVGI-GGGGVNAVNRMIEQGLKGVEFIAINTDAQ-ALLMSDA----DVKLDVGRDSTRGLGAGADPEVGRKAAEDAK   76 (198)
T ss_dssp             CEEEEEE-HHHHHHHHHHHHHTTCCSEEEEEEESCHH-HHHHCCC----SEEEECCTTTC-----CCCHHHHHHHHHHTH
T ss_pred             eEEEEEe-CchHHHHHHHHHHcCCCCceEEEEcchHH-HHhcCCc----chhhccccccccCCCcCcChhhhHhhHHHHH
Confidence            4567766 77799999999998764444443333211 1111100    2222222           1        1345


Q ss_pred             hhHHHHhcCccEEEEecccCCCCCCCCchhhhhhhHHhHHHHHHHHHHhcCCC
Q 023689           72 GAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR  124 (278)
Q Consensus        72 ~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~  124 (278)
                      +.+.+.+++.|.||-.||.....            -.-++--+.+.|++.+.-
T Consensus        77 ~~I~~~l~~~d~vfi~AGlGGgT------------GtGaaPviA~iake~g~l  117 (198)
T d1rq2a1          77 DEIEELLRGADMVFVTAGEGGGT------------GTGGAPVVASIARKLGAL  117 (198)
T ss_dssp             HHHHHHHTTCSEEEEEEETTSSH------------HHHHHHHHHHHHHHHTCE
T ss_pred             HHHHHHhcCCCEEEEEEecCCCC------------CcchHHHHHHHHHHcCCc
Confidence            67888889999999999986641            123455688889888753

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=88.21  E-value=0.27  Score=37.89  Aligned_cols=34  Identities=29%  Similarity=0.406  Sum_probs=30.1

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCC
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS   45 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~   45 (278)
                      -.|+|+|| |.-|-..+..|.+.|. +|+++.+.++
T Consensus         8 ~dV~IIGA-G~sGl~~a~~L~~~G~-~v~i~Ek~~~   41 (298)
T d1w4xa1           8 VDVLVVGA-GFSGLYALYRLRELGR-SVHVIETAGD   41 (298)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHTTC-CEEEECSSSS
T ss_pred             CCEEEECc-cHHHHHHHHHHHhCCC-CEEEEEcCCC
Confidence            46999999 9999999999999999 8888887654

>d1lc0a1 c.2.1.3 (A:2-128,A:247-291) Biliverdin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Biliverdin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=87.37  E-value=0.33  Score=33.91  Aligned_cols=26  Identities=27%  Similarity=0.335  Sum_probs=19.8

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHC
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDN   32 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~   32 (278)
                      +...++|.|.|. |.+|+..++.|.+.
T Consensus         4 ~~~k~kv~iIG~-G~~g~~h~~~l~~~   29 (172)
T d1lc0a1           4 NSGKFGVVVVGV-GRAGSVRLRDLKDP   29 (172)
T ss_dssp             CCCSEEEEEECC-SHHHHHHHHHHTSH
T ss_pred             CCCCcEEEEEcC-CHHHHHHHHHHHhC
Confidence            333458999987 89999988877654

>d1ps9a2 c.3.1.1 (A:466-627) 2,4-dienoyl-CoA reductase, C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=86.91  E-value=0.21  Score=34.47  Aligned_cols=27  Identities=22%  Similarity=0.163  Sum_probs=24.7

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCC
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYT   35 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~   35 (278)
                      .+|+|+|+|| |++|..+++.+.+.|.+
T Consensus        28 ~gkrVvVIGg-G~~g~d~a~~~~r~G~~   54 (162)
T d1ps9a2          28 VGNKVAIIGC-GGIGFDTAMYLSQPGES   54 (162)
T ss_dssp             CCSEEEEECC-HHHHHHHHHHHTCCSSC
T ss_pred             cCCceEEEcC-chhHHHHHHHHHHcCCc
Confidence            4789999998 99999999999999983

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=86.62  E-value=0.026  Score=39.66  Aligned_cols=77  Identities=17%  Similarity=0.074  Sum_probs=41.3

Q ss_pred             ceEEEeCcchhhHHHHHHH-HHHC----CCCeEEEEecCCCCCcccccCCCC-CCCceEEEEccCCChhhHHHHhcCccE
Q 023689           10 ETVCVTGANGFIGTWLVKT-LLDN----NYTSINATVFPGSDSSHLFALPGA-GDANLRVFEADVLDSGAVSRAVEGCKG   83 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~-L~~~----g~~~v~~~~r~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~~~~~~~~~d~   83 (278)
                      |||.|.|| |.+|...+-. |+..    ...++...+.++++......+... .........   +  ....+.++++|+
T Consensus         1 mKIaiIGa-Gs~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~~~---t--~~~~~~l~~aDv   74 (162)
T d1up7a1           1 MRIAVIGG-GSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLI---S--DTFEGAVVDAKY   74 (162)
T ss_dssp             CEEEEETT-TCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEEE---C--SSHHHHHTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceEEE---e--cCcccccCCCCE
Confidence            58999999 4466555533 3321    113788888766543322111000 000222111   2  234678899999


Q ss_pred             EEEecccCC
Q 023689           84 VFHVASPCT   92 (278)
Q Consensus        84 vi~~a~~~~   92 (278)
                      ||..|+...
T Consensus        75 VVita~~~~   83 (162)
T d1up7a1          75 VIFQFRPGG   83 (162)
T ss_dssp             EEECCCTTH
T ss_pred             EEEecccCC
Confidence            999998643

>d1vkza2 c.30.1.1 (A:4-93) Glycinamide ribonucleotide synthetase (GAR-syn), N-domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide synthetase (GAR-syn), N-domain
species: Thermotoga maritima [TaxId: 2336]

Probab=85.81  E-value=0.61  Score=28.66  Aligned_cols=31  Identities=13%  Similarity=0.044  Sum_probs=25.4

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEec
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVF   42 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r   42 (278)
                      |||||.|. |+=-.++++.|.++.. ++++.--
T Consensus         1 MkVLviGs-GgREHAia~~l~~s~~-~v~~~pG   31 (90)
T d1vkza2           1 VRVHILGS-GGREHAIGWAFAKQGY-EVHFYPG   31 (90)
T ss_dssp             CEEEEEEC-SHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred             CEEEEECC-CHHHHHHHHHHhcCCC-eEEEecC
Confidence            68999987 7778899999998887 7877643

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=85.74  E-value=1.1  Score=31.01  Aligned_cols=80  Identities=19%  Similarity=0.130  Sum_probs=45.7

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccC------CCCCCC------------ceEEEEccCCCh
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL------PGAGDA------------NLRVFEADVLDS   71 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~------~~~~~~------------~v~~~~~Dl~d~   71 (278)
                      |||.|=|- |-||+.+.+.|.+++. +|+++.-. ...+.+.-+      -+....            +-.+....-.|+
T Consensus         1 ikigINGf-GRIGR~~~R~l~~~~i-~iv~INd~-~~~~~~ayLl~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~p   77 (168)
T d2g82a1           1 MKVGINGF-GRIGRQVFRILHSRGV-EVALINDL-TDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDP   77 (168)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTC-CEEEEECS-SCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSG
T ss_pred             CEEEEECC-cHHHHHHHHHHhcCCC-EEEEECCC-cchhhhhheeecccccCccccccccccceeEecceeEEEEecCCh
Confidence            47888865 9999999999999888 66665432 222221111      000000            111112233455


Q ss_pred             hhHHHHhcCccEEEEecccCC
Q 023689           72 GAVSRAVEGCKGVFHVASPCT   92 (278)
Q Consensus        72 ~~~~~~~~~~d~vi~~a~~~~   92 (278)
                      +.+.-.-.++|+|+-|.|...
T Consensus        78 ~~i~W~~~gvdiViEcTG~f~   98 (168)
T d2g82a1          78 KEIPWAEAGVGVVIESTGVFT   98 (168)
T ss_dssp             GGCCTGGGTEEEEEECSSSCC
T ss_pred             HHCcccccCCceeEecccccc
Confidence            555544457899999988633

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=85.67  E-value=0.51  Score=32.68  Aligned_cols=104  Identities=13%  Similarity=-0.002  Sum_probs=51.1

Q ss_pred             ceEEEeCcchhhHHH-HHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEec
Q 023689           10 ETVCVTGANGFIGTW-LVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (278)
Q Consensus        10 ~~vlItGatG~iG~~-l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a   88 (278)
                      +||.|.|+ |.+|+. .+..|.+.+..++.+.+++++.........     +...+   .+|.+++.+  .++|+|+-+.
T Consensus         2 irvgiiG~-G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~~~---~~~~~~ll~--~~iD~V~I~t   70 (167)
T d1xeaa1           2 LKIAMIGL-GDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRY-----RVSAT---CTDYRDVLQ--YGVDAVMIHA   70 (167)
T ss_dssp             EEEEEECC-CHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHT-----TCCCC---CSSTTGGGG--GCCSEEEECS
T ss_pred             eEEEEEcC-CHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhc-----ccccc---cccHHHhcc--cccceecccc
Confidence            58999987 777865 556665554325555555544433332211     11111   123232221  3688887654


Q ss_pred             ccCCC---------CCCCCchhhhhhhHHhHHHHHHHHHHhcCCC
Q 023689           89 SPCTL---------EDPVDPEKELILPAVQGTLNVLEAAKRFGVR  124 (278)
Q Consensus        89 ~~~~~---------~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~  124 (278)
                      .....         ....--.+.-+..|..-...+.+++++++..
T Consensus        71 p~~~H~~~~~~al~~gk~V~~EKP~~~~~~e~~~l~~~a~~~~~~  115 (167)
T d1xeaa1          71 ATDVHSTLAAFFLHLGIPTFVDKPLAASAQECENLYELAEKHHQP  115 (167)
T ss_dssp             CGGGHHHHHHHHHHTTCCEEEESCSCSSHHHHHHHHHHHHHTTCC
T ss_pred             cccccccccccccccccccccCCCCcCCHHHHHHHHHHHHHcCCE
Confidence            22111         0000001222344566677888888888753

>d2nu7a1 c.2.1.8 (A:2-120) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Escherichia coli [TaxId: 562]

Probab=85.66  E-value=3.1  Score=26.74  Aligned_cols=34  Identities=24%  Similarity=0.331  Sum_probs=30.1

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCC
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG   44 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~   44 (278)
                      -||+|-|-||..|+.-++++++.|. +|++.+...
T Consensus         7 trVlvQGiTG~~G~~ht~~m~~yGT-~vVaGVtPg   40 (119)
T d2nu7a1           7 TKVICQGFTGSQGTFHSEQAIAYGT-KMVGGVTPG   40 (119)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTC-EEEEEECTT
T ss_pred             CcEEEEcCCCcHHHHHHHHHHHhCC-ceEEEEccC
Confidence            4899999999999999999999998 788777644

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=85.15  E-value=0.013  Score=40.72  Aligned_cols=60  Identities=17%  Similarity=0.202  Sum_probs=32.7

Q ss_pred             EeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEEec
Q 023689           14 VTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (278)
Q Consensus        14 ItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~~a   88 (278)
                      ++|. |.+|+++++.|.+ +++.+.+..|++++.+.+.+...          ...   .+..++++.+|+||-+.
T Consensus         4 fIG~-G~mg~~l~~~L~~-~~~~~~v~~R~~~~~~~l~~~~~----------~~~---~~~~~~~~~~DiVil~v   63 (153)
T d2i76a2           4 FVGT-GTLTRFFLECLKD-RYEIGYILSRSIDRARNLAEVYG----------GKA---ATLEKHPELNGVVFVIV   63 (153)
T ss_dssp             EESC-CHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTC----------CCC---CSSCCCCC---CEEECS
T ss_pred             EEeC-cHHHHHHHHHHHh-CCCEEEEEeCChhhhcchhhccc----------ccc---cchhhhhccCcEEEEec
Confidence            5555 9999999998765 44255567787766555544211          111   12335667789888663

>d1cjca1 c.3.1.1 (A:107-331) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=84.88  E-value=0.66  Score=33.98  Aligned_cols=38  Identities=16%  Similarity=0.188  Sum_probs=31.5

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHHH--------------------CCCCeEEEEecCCC
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLLD--------------------NNYTSINATVFPGS   45 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~~--------------------~g~~~v~~~~r~~~   45 (278)
                      +.+|+|+|+|+ |.++.=+++.|++                    .|.++|.++.|+..
T Consensus        37 ~~gk~VvVIGg-GNVAlD~aR~l~r~~~~l~~tdi~~~~l~~l~~~g~~~V~iv~RRg~   94 (225)
T d1cjca1          37 LSCDTAVILGQ-GNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGP   94 (225)
T ss_dssp             TTSSEEEEESC-SHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCG
T ss_pred             ccCceEEEECC-chhHHHHHHHHhcCHHhhcCCCCcHHHHHHHhccCCCeEEEEEEcCh
Confidence            45899999988 9999999999998                    36678888877653

>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]

Probab=84.84  E-value=0.26  Score=37.37  Aligned_cols=35  Identities=29%  Similarity=0.241  Sum_probs=29.6

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHC-CCCeEEEEecCCC
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPGS   45 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~-g~~~v~~~~r~~~   45 (278)
                      ..-|+|+|| |.-|...+..|.++ |+ +|.++.+++.
T Consensus        33 e~DViVIGa-GpaGL~aA~~LA~~~G~-~V~vlE~~~~   68 (278)
T d1rp0a1          33 ETDVVVVGA-GSAGLSAAYEISKNPNV-QVAIIEQSVS   68 (278)
T ss_dssp             EEEEEEECC-SHHHHHHHHHHHTSTTS-CEEEEESSSS
T ss_pred             CCCEEEECC-CHHHHHHHHHHHHccCC-eEEEEecCCC
Confidence            345999999 99999999999874 99 8888887654

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=84.58  E-value=0.64  Score=31.09  Aligned_cols=32  Identities=19%  Similarity=0.362  Sum_probs=27.2

Q ss_pred             CCceEEEeCcc---hhhHHHHHHHHHHCCCCeEEEE
Q 023689            8 EEETVCVTGAN---GFIGTWLVKTLLDNNYTSINAT   40 (278)
Q Consensus         8 ~~~~vlItGat---G~iG~~l~~~L~~~g~~~v~~~   40 (278)
                      +.|+|.|.|+|   +-.|..+.+.|.+.|+ .+...
T Consensus        12 ~pksIAVVGaS~~~~k~g~~v~~~L~~~g~-~~~~v   46 (136)
T d1iuka_          12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGY-RVLPV   46 (136)
T ss_dssp             HCCEEEEETCCSSTTSHHHHHHHHHHHTTC-EEEEE
T ss_pred             CCCeEEEEeecCCCCCchHHHHHHHhcCCC-CceEE
Confidence            45789999998   5699999999999999 66655

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=84.50  E-value=0.62  Score=36.00  Aligned_cols=32  Identities=13%  Similarity=0.258  Sum_probs=21.0

Q ss_pred             ceEEEeCc-ch-hh--HHHHHHHHHHCCCCeEEEEec
Q 023689           10 ETVCVTGA-NG-FI--GTWLVKTLLDNNYTSINATVF   42 (278)
Q Consensus        10 ~~vlItGa-tG-~i--G~~l~~~L~~~g~~~v~~~~r   42 (278)
                      |||||++| || -+  ...|+++|.++|+ +|..+..
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~-eV~~i~~   36 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGW-QVRWLGT   36 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTC-EEEEEEC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCC-EEEEEEe
Confidence            57777764 32 22  2248899999999 7766554

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.38  E-value=0.56  Score=36.29  Aligned_cols=32  Identities=25%  Similarity=0.277  Sum_probs=28.3

Q ss_pred             EEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCC
Q 023689           12 VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS   45 (278)
Q Consensus        12 vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~   45 (278)
                      |+|+|| |.-|...+..|.+.|+ +|+++.+++.
T Consensus         2 ViVIGa-G~aGL~aA~~L~~~G~-~V~VlE~~~~   33 (383)
T d2v5za1           2 VVVVGG-GISGMAAAKLLHDSGL-NVVVLEARDR   33 (383)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTC-CEEEEESSSS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCC-CEEEEecCCC
Confidence            789988 9999999999999999 8888877554

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=84.34  E-value=0.45  Score=33.58  Aligned_cols=105  Identities=10%  Similarity=0.072  Sum_probs=53.7

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHCCCCeEEEE-ecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhc--CccEEEE
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINAT-VFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFH   86 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~g~~~v~~~-~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vi~   86 (278)
                      .|+.|+|. |.+|+..++.|...+..+++++ +++++.........+... ...+       .++++++++  ++|+|+-
T Consensus         2 iki~iIG~-G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~~~-~~~~-------~~~~~~ll~~~~iD~v~I   72 (184)
T d1ydwa1           2 IRIGVMGC-ADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPE-STKI-------HGSYESLLEDPEIDALYV   72 (184)
T ss_dssp             EEEEEESC-CTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCT-TCEE-------ESSHHHHHHCTTCCEEEE
T ss_pred             eEEEEEcC-CHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhcccccc-ceee-------cCcHHHhhhccccceeee
Confidence            47899985 8899999998887633266655 444433222221111000 1111       233555553  5788886


Q ss_pred             ecccCCC--------CCCC-CchhhhhhhHHhHHHHHHHHHHhcCC
Q 023689           87 VASPCTL--------EDPV-DPEKELILPAVQGTLNVLEAAKRFGV  123 (278)
Q Consensus        87 ~a~~~~~--------~~~~-~~~~~~~~~n~~~~~~ll~~~~~~~~  123 (278)
                      +......        .... --.+.-+..|..-...+++.+++.++
T Consensus        73 ~tp~~~h~~~~~~~l~~g~~v~~EKP~~~~~~e~~~l~~~~~~~~~  118 (184)
T d1ydwa1          73 PLPTSLHVEWAIKAAEKGKHILLEKPVAMNVTEFDKIVDACEANGV  118 (184)
T ss_dssp             CCCGGGHHHHHHHHHTTTCEEEECSSCSSSHHHHHHHHHHHHTTTC
T ss_pred             cccchhhcchhhhhhhccceeecccccccCHHHHHHHHHHHHhhCC
Confidence            5422110        0000 00012233456667778888877764

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=84.10  E-value=0.57  Score=34.50  Aligned_cols=34  Identities=15%  Similarity=0.001  Sum_probs=29.5

Q ss_pred             eEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCC
Q 023689           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD   46 (278)
Q Consensus        11 ~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~   46 (278)
                      -|+|+|| |..|...+..|.+.|+ +|+++.+++..
T Consensus         4 DViIIGa-G~aGl~aA~~la~~G~-~V~liEk~~~~   37 (251)
T d2i0za1           4 DVIVIGG-GPSGLMAAIGAAEEGA-NVLLLDKGNKL   37 (251)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTC-CEEEECSSSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCC-cEEEEeCCCCC
Confidence            4899998 9999999999999999 88888876543

>d1lqta1 c.3.1.1 (A:109-324) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=83.89  E-value=0.83  Score=33.14  Aligned_cols=38  Identities=16%  Similarity=0.161  Sum_probs=31.3

Q ss_pred             cCCceEEEeCcchhhHHHHHHHHH--------------------HCCCCeEEEEecCCC
Q 023689            7 KEEETVCVTGANGFIGTWLVKTLL--------------------DNNYTSINATVFPGS   45 (278)
Q Consensus         7 ~~~~~vlItGatG~iG~~l~~~L~--------------------~~g~~~v~~~~r~~~   45 (278)
                      +.+++|+|+|+ |.++.=+++.|+                    +.|.++|.++.|+..
T Consensus        37 ~~gk~VvVIGg-GNvAlD~AR~ll~~~~~l~~tdi~~~~l~~l~r~~~~~V~iv~RRg~   94 (216)
T d1lqta1          37 LSGARAVVIGN-GNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGP   94 (216)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCG
T ss_pred             ccCceEEEECC-CchhHhhhhhhccCHhhhccCCCcHHHHHHHhhcCCceEEEEEECCh
Confidence            45799999998 999999999887                    567778888877653

>d1p3y1_ c.34.1.1 (1:) MrsD {Bacillus sp. hil-y85/54728 [TaxId: 69002]}

class: Alpha and beta proteins (a/b)
fold: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
superfamily: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
family: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
domain: MrsD
species: Bacillus sp. hil-y85/54728 [TaxId: 69002]

Probab=83.57  E-value=0.37  Score=34.20  Aligned_cols=37  Identities=11%  Similarity=0.028  Sum_probs=23.0

Q ss_pred             ccccCCceEEEeCcchhhH----HHHHHHHHHCCCCeEEEEec
Q 023689            4 EAEKEEETVCVTGANGFIG----TWLVKTLLDNNYTSINATVF   42 (278)
Q Consensus         4 m~~~~~~~vlItGatG~iG----~~l~~~L~~~g~~~v~~~~r   42 (278)
                      |+-+++|||+ .|.||.|+    ..+++.|.+.|+ +|.++..
T Consensus         1 ms~l~~KkIl-lgvTGsiaa~k~~~l~~~L~~~g~-eV~vv~T   41 (183)
T d1p3y1_           1 ISILKDKKLL-IGICGSISSVGISSYLLYFKSFFK-EIRVVMT   41 (183)
T ss_dssp             CTTGGGCEEE-EEECSCGGGGGTHHHHHHHTTTSS-EEEEEEC
T ss_pred             CCCcCCCEEE-EEEeCHHHHHHHHHHHHHHHHCCC-eEEEEEE
Confidence            4446677765 44445443    477788888898 6665543

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=83.00  E-value=0.22  Score=35.33  Aligned_cols=77  Identities=14%  Similarity=0.198  Sum_probs=46.5

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCC-------------CCCCceEEEEccCCChh
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPG-------------AGDANLRVFEADVLDSG   72 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~-------------~~~~~v~~~~~Dl~d~~   72 (278)
                      ...+++||..|++-+  + .+..|.++|+ .|++++.++...+..+....             .......++.+|..+..
T Consensus        18 ~~~~~rvLd~GCG~G--~-~a~~la~~G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~   93 (201)
T d1pjza_          18 VVPGARVLVPLCGKS--Q-DMSWLSGQGY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALT   93 (201)
T ss_dssp             CCTTCEEEETTTCCS--H-HHHHHHHHCC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSST
T ss_pred             CCCCCEEEEecCcCC--H-HHHHHHHcCC-ceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccccccc
Confidence            345789999998543  3 5556777899 99999876543322221100             00125678888888755


Q ss_pred             hHHHHhcCccEEEEec
Q 023689           73 AVSRAVEGCKGVFHVA   88 (278)
Q Consensus        73 ~~~~~~~~~d~vi~~a   88 (278)
                      .  .....+|.|+-..
T Consensus        94 ~--~~~~~~D~i~~~~  107 (201)
T d1pjza_          94 A--RDIGHCAAFYDRA  107 (201)
T ss_dssp             H--HHHHSEEEEEEES
T ss_pred             c--ccccceeEEEEEe
Confidence            3  2234567776543

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=82.61  E-value=0.69  Score=34.31  Aligned_cols=34  Identities=18%  Similarity=0.087  Sum_probs=30.2

Q ss_pred             eEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCC
Q 023689           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD   46 (278)
Q Consensus        11 ~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~   46 (278)
                      .|+|+|| |--|...+..|.+.|. +|.++.+++..
T Consensus         6 DViIIGa-G~aGl~aA~~la~~G~-~V~vlEk~~~~   39 (253)
T d2gqfa1           6 ENIIIGA-GAAGLFCAAQLAKLGK-SVTVFDNGKKI   39 (253)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTC-CEEEECSSSSS
T ss_pred             cEEEECc-CHHHHHHHHHHHHCCC-cEEEEecCCCC
Confidence            6999998 9999999999999999 89888887654

>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Streptomyces sp. [TaxId: 1931]

Probab=82.58  E-value=0.64  Score=36.52  Aligned_cols=31  Identities=13%  Similarity=0.063  Sum_probs=27.2

Q ss_pred             eEEEeCcchhhHHHHHHHHHHCCCCeEEEEecC
Q 023689           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFP   43 (278)
Q Consensus        11 ~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~   43 (278)
                      -|+|+|+ |+-|..++.+|.+.|+ .|.++-+-
T Consensus         4 ~VIVVGs-G~aG~v~A~rLaeaG~-~VlvLEaG   34 (367)
T d1n4wa1           4 PAVVIGT-GYGAAVSALRLGEAGV-QTLMLEMG   34 (367)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred             eEEEeCc-CHHHHHHHHHHHHCcC-eEEEEecC
Confidence            3788877 9999999999999999 88888774

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=81.52  E-value=1.2  Score=34.51  Aligned_cols=77  Identities=18%  Similarity=0.011  Sum_probs=45.9

Q ss_pred             cCCceEE-EeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccC-CCCCCCceEEEEccCCChh-hHHHHhcCccE
Q 023689            7 KEEETVC-VTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL-PGAGDANLRVFEADVLDSG-AVSRAVEGCKG   83 (278)
Q Consensus         7 ~~~~~vl-ItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~-~~~~~~~v~~~~~Dl~d~~-~~~~~~~~~d~   83 (278)
                      .++++|| +.-++|..+.+++    ..+. .|++++.++...+..+.. ...+-.+++++.+|..+.. .+...-+.+|.
T Consensus       144 ~~g~rVLDl~~gtG~~s~~~a----~g~~-~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~~~~~~~~~~~~fD~  218 (318)
T d1wxxa2         144 FRGERALDVFSYAGGFALHLA----LGFR-EVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDL  218 (318)
T ss_dssp             CCEEEEEEETCTTTHHHHHHH----HHEE-EEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred             hCCCeeeccCCCCcHHHHHHH----hcCC-cEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHHHhhhhHhhhcCCCE
Confidence            3567887 4445666665543    2355 899998877554333221 0011127899999998743 23333357999


Q ss_pred             EEEec
Q 023689           84 VFHVA   88 (278)
Q Consensus        84 vi~~a   88 (278)
                      |+...
T Consensus       219 Vi~Dp  223 (318)
T d1wxxa2         219 VVLDP  223 (318)
T ss_dssp             EEECC
T ss_pred             EEEcC
Confidence            99775

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=81.17  E-value=4.8  Score=27.25  Aligned_cols=30  Identities=13%  Similarity=0.147  Sum_probs=26.4

Q ss_pred             CCceEEEeCcchhhHHHHHHHHHHCCCCeEE
Q 023689            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSIN   38 (278)
Q Consensus         8 ~~~~vlItGatG~iG~~l~~~L~~~g~~~v~   38 (278)
                      +++++.|++.+|+.|.-++..+.+.|- ++-
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl-~l~   31 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGL-KLA   31 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTC-EEC
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCC-ccC
Confidence            578999999999999999999999997 553

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=80.80  E-value=0.26  Score=35.82  Aligned_cols=76  Identities=20%  Similarity=0.178  Sum_probs=50.4

Q ss_pred             CCceEEEeCcchh-hHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEEE
Q 023689            8 EEETVCVTGANGF-IGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (278)
Q Consensus         8 ~~~~vlItGatG~-iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi~   86 (278)
                      .+++||=.|++.+ .-.+|++ +...|  .|++++.++...+.+.+.....+ ++.++..|..++......+..+|+++|
T Consensus        56 pg~~VLDlGcG~G~~~~~la~-~v~~g--~V~gvDis~~~i~~a~~~a~~~~-ni~~i~~d~~~~~~~~~~~~~vd~v~~  131 (209)
T d1nt2a_          56 GDERVLYLGAASGTTVSHLAD-IVDEG--IIYAVEYSAKPFEKLLELVRERN-NIIPLLFDASKPWKYSGIVEKVDLIYQ  131 (209)
T ss_dssp             SSCEEEEETCTTSHHHHHHHH-HTTTS--EEEEECCCHHHHHHHHHHHHHCS-SEEEECSCTTCGGGTTTTCCCEEEEEE
T ss_pred             CCCEEEEeCCcCCHHHHHHHH-hccCC--eEEEEeCCHHHHHHHHHHhhccC-CceEEEeeccCccccccccceEEEEEe
Confidence            3678998887554 4444444 44443  79999887654433322111112 899999999998887777788898887


Q ss_pred             e
Q 023689           87 V   87 (278)
Q Consensus        87 ~   87 (278)
                      .
T Consensus       132 ~  132 (209)
T d1nt2a_         132 D  132 (209)
T ss_dssp             C
T ss_pred             c
Confidence            5

>d1euca1 c.2.1.8 (A:1-130) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=80.78  E-value=5.4  Score=25.99  Aligned_cols=36  Identities=22%  Similarity=0.338  Sum_probs=31.1

Q ss_pred             CceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCC
Q 023689            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS   45 (278)
Q Consensus         9 ~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~   45 (278)
                      .-+|+|-|-||.-|+.-++++++-|- +|++.+....
T Consensus        15 ~TrVivQGiTG~~G~~ht~~m~~YGT-~iVaGVtPgK   50 (130)
T d1euca1          15 NTKVICQGFTGKQGTFHSQQALEYGT-NLVGGTTPGK   50 (130)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEECTTC
T ss_pred             CCeEEEEcCCCcHHHHHHHHHHHhcC-CeEEeeccCC
Confidence            34899999999999999999999998 8888776543

>d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermotoga maritima [TaxId: 2336]

Probab=80.66  E-value=5.7  Score=27.30  Aligned_cols=29  Identities=21%  Similarity=0.384  Sum_probs=21.6

Q ss_pred             eEEEeCcchhhHHHHHHHHHHCC---CCeEEEEe
Q 023689           11 TVCVTGANGFIGTWLVKTLLDNN---YTSINATV   41 (278)
Q Consensus        11 ~vlItGatG~iG~~l~~~L~~~g---~~~v~~~~   41 (278)
                      ||.|=| -|-||+.+.+.++++.   . +|+++.
T Consensus         2 kIgING-fGRIGR~v~R~~~~~~~~~i-~vvaIN   33 (169)
T d1hdgo1           2 RVAING-FGRIGRLVYRIIYERKNPDI-EVVAIN   33 (169)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHTCTTC-EEEEEE
T ss_pred             EEEEEC-CChHHHHHHHHHHhccCCCE-EEEEec
Confidence            677776 5999999999998642   4 555553

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=80.34  E-value=0.61  Score=33.46  Aligned_cols=69  Identities=13%  Similarity=-0.053  Sum_probs=45.6

Q ss_pred             ccCCceEEEeCcchhhHHHHHHHHHHCCCCeEEEEecCCCCCcccccCCCCCCCceEEEEccCCChhhHHHHhcCccEEE
Q 023689            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (278)
Q Consensus         6 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   85 (278)
                      .+.||+||=.|++.++   +.-.+...|...|++++.++...+..+...    .+++++.+|+.+.+      .++|+||
T Consensus        46 dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~N~----~~~~~~~~D~~~l~------~~fD~Vi  112 (197)
T d1ne2a_          46 NIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKRNC----GGVNFMVADVSEIS------GKYDTWI  112 (197)
T ss_dssp             SSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHHHC----TTSEEEECCGGGCC------CCEEEEE
T ss_pred             CCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHHcc----ccccEEEEehhhcC------CcceEEE
Confidence            4578999988865442   223455677767999988765443333211    17889999986543      5789998


Q ss_pred             Ee
Q 023689           86 HV   87 (278)
Q Consensus        86 ~~   87 (278)
                      -+
T Consensus       113 ~N  114 (197)
T d1ne2a_         113 MN  114 (197)
T ss_dssp             EC
T ss_pred             eC
Confidence            76

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=80.15  E-value=0.96  Score=32.80  Aligned_cols=34  Identities=21%  Similarity=0.345  Sum_probs=28.6

Q ss_pred             ceEEEeCcchhhHHHHHHHHHHC--CCCeEEEEecCCC
Q 023689           10 ETVCVTGANGFIGTWLVKTLLDN--NYTSINATVFPGS   45 (278)
Q Consensus        10 ~~vlItGatG~iG~~l~~~L~~~--g~~~v~~~~r~~~   45 (278)
                      +||.|+|| |--|...+..|.+.  |+ +|+.+.+.+.
T Consensus         2 ~kv~iIGa-GpaGl~aA~~L~~~~~~~-~V~v~e~~~~   37 (230)
T d1cjca2           2 PQICVVGS-GPAGFYTAQHLLKHHSRA-HVDIYEKQLV   37 (230)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSSC-EEEEECSSSS
T ss_pred             CeEEEECc-cHHHHHHHHHHHhcCCCC-eEEEEeCCCC
Confidence            58999988 99999999999875  67 8888877654