BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023717
(278 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|C0ZIY1|PSUG_BREBN Pseudouridine-5'-phosphate glycosidase OS=Brevibacillus brevis
(strain 47 / JCM 6285 / NBRC 100599) GN=psuG PE=3 SV=1
Length = 308
Score = 295 bits (756), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 152/278 (54%), Positives = 193/278 (69%), Gaps = 5/278 (1%)
Query: 1 MPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRD 60
MPYPQN E AKEVE I+R+NGAVPATI I++G +GL+ ELE A K +RRD
Sbjct: 33 MPYPQNIEMAKEVEQIIRDNGAVPATIGIMDGKIKIGLTDSELEEFAT-NKNVAKVSRRD 91
Query: 61 IAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPV 120
A+++A+ GATTV+ATM A M GI +F TGGIGGVHR GE T D+S+DLTEL +T V
Sbjct: 92 FAYILASGKIGATTVAATMIAAEMAGIHMFATGGIGGVHREGEITWDVSADLTELAQTDV 151
Query: 121 AVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARL 180
AVV AG KSILDI RTLEYLET GV V Y+T+EFP+FF SG V R+D+PE+ ++
Sbjct: 152 AVVCAGAKSILDIGRTLEYLETQGVPVVGYRTDEFPSFFARKSGFGVDMRIDTPEEVGKM 211
Query: 181 IDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLARVN 240
++ L L G++I P+P A + IE+ IQ AL EA+E NI G TPF+L +V
Sbjct: 212 MNTKWDLGLKGGMIIANPVPESDALNHEEIEAVIQKALAEAKENNIAGKQVTPFMLDKVK 271
Query: 241 ELTGGLSLASNIALVKNNALIGAKISVALAQLRQQESN 278
+LT G SLA+NIALVK+NA + AKI+VA Q+E+N
Sbjct: 272 KLTEGKSLATNIALVKHNAEVAAKIAVAY----QKEAN 305
>sp|Q8NYD0|PSUG_STAAW Pseudouridine-5'-phosphate glycosidase OS=Staphylococcus aureus
(strain MW2) GN=psuG PE=3 SV=1
Length = 307
Score = 287 bits (735), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 150/272 (55%), Positives = 188/272 (69%), Gaps = 1/272 (0%)
Query: 1 MPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRD 60
MPYPQN E A VE I+RNNGA+PATIAI++G +GL +E+LE LA K +RRD
Sbjct: 36 MPYPQNVEMATTVEQIIRNNGAIPATIAIIDGKIKIGLESEDLEILAT-SKDVAKVSRRD 94
Query: 61 IAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPV 120
+A VVA + GATTV+ TM A+M GI FVTGGIGGVH+ EHTMDIS+DL EL +T V
Sbjct: 95 LAEVVAMKCVGATTVATTMICAAMAGIQFFVTGGIGGVHKGAEHTMDISADLEELSKTNV 154
Query: 121 AVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARL 180
V+ AG KSILD+P+T+EYLET GV V Y+TNE PAFFT SG K+ V++PE A +
Sbjct: 155 TVICAGAKSILDLPKTMEYLETKGVPVIGYQTNELPAFFTRESGVKLTSSVETPERLADI 214
Query: 181 IDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLARVN 240
+L L G+V+ PIP EHA S IE+ I A+ EA + I G TPFLL ++
Sbjct: 215 HLTKQQLNLEGGIVVANPIPYEHALSKAYIEAIINEAVVEAENQGIKGKDATPFLLGKIV 274
Query: 241 ELTGGLSLASNIALVKNNALIGAKISVALAQL 272
E T G SLA+NI LV+NNA +GAKI+VA+ +L
Sbjct: 275 EKTNGKSLAANIKLVENNAALGAKIAVAVNKL 306
>sp|B1HV79|PSUG_LYSSC Pseudouridine-5'-phosphate glycosidase OS=Lysinibacillus sphaericus
(strain C3-41) GN=psuG PE=3 SV=1
Length = 304
Score = 286 bits (731), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 151/273 (55%), Positives = 188/273 (68%), Gaps = 1/273 (0%)
Query: 1 MPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRD 60
MPYPQN +TA+EVE I+R+NGAVPATIA+++G +GLS EELE A K +RRD
Sbjct: 33 MPYPQNVQTAREVEQIIRDNGAVPATIALIDGKIKIGLSDEELEMFGNAQGVA-KASRRD 91
Query: 61 IAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPV 120
+ +++AT+ GATTV+ATM A + GI +FVTGGIGGVHR E TMD+S+DL EL +T V
Sbjct: 92 LGYLLATKKLGATTVAATMICAELAGIEIFVTGGIGGVHRGAETTMDVSADLEELAQTNV 151
Query: 121 AVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARL 180
AV+ AG KSILDI TLEYLET GV V Y T+E PAF+T SG V ++D+PE+ A +
Sbjct: 152 AVICAGAKSILDIGLTLEYLETKGVPVVGYGTDELPAFYTRQSGFDVNFQLDTPEEIAEM 211
Query: 181 IDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLARVN 240
+ +L L G VI PIP A I + I+ AL EA E I G TPFLL +V
Sbjct: 212 LSAKWQLGLKGGAVIANPIPEAEALEHGFITNIIEKALVEAEENGIQGKNVTPFLLGKVK 271
Query: 241 ELTGGLSLASNIALVKNNALIGAKISVALAQLR 273
ELT G SL +NIALVKNNA++GAKI+VA QL
Sbjct: 272 ELTEGKSLDANIALVKNNAVVGAKIAVAFNQLH 304
>sp|Q7MZE1|PSUG2_PHOLL Pseudouridine-5'-phosphate glycosidase 2 OS=Photorhabdus
luminescens subsp. laumondii (strain TT01) GN=psuG2 PE=3
SV=1
Length = 312
Score = 276 bits (705), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 146/266 (54%), Positives = 183/266 (68%)
Query: 1 MPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRD 60
MPYPQN +TA +VE +R NGAVPATIA++ G+ GLS EE+ LA+ G + K +RRD
Sbjct: 39 MPYPQNVKTALQVEQKIRENGAVPATIAVINGMMKAGLSHEEIAFLARKGDEITKVSRRD 98
Query: 61 IAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPV 120
+ V+A NGATTV++TM A+M GI +F TGGIGGVHR E T DIS+DL EL +T V
Sbjct: 99 LPFVIAAGKNGATTVASTMIIAAMAGIRIFATGGIGGVHRGAEQTFDISADLQELAKTSV 158
Query: 121 AVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARL 180
AVV AG KSILD+ T EYLETHGV + Y+T+ PAFF TS V R+DSPE A+
Sbjct: 159 AVVCAGAKSILDLGLTTEYLETHGVPLIGYQTHALPAFFCRTSPFSVNIRLDSPEQIAQA 218
Query: 181 IDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLARVN 240
+ V L GLV+ PIP +A I +AI+ A+RE+ E+ + G A TPFLLARV+
Sbjct: 219 MAVKWDTGLQGGLVVANPIPEPYAMPEAEISAAIEQAVRESIEQRVNGKACTPFLLARVS 278
Query: 241 ELTGGLSLASNIALVKNNALIGAKIS 266
ELTGG SL+SNI LV NNA + AKI+
Sbjct: 279 ELTGGNSLSSNIQLVLNNAELAAKIA 304
>sp|A7GCK7|PSUG_CLOBL Pseudouridine-5'-phosphate glycosidase OS=Clostridium botulinum
(strain Langeland / NCTC 10281 / Type F) GN=psuG PE=3
SV=1
Length = 307
Score = 275 bits (702), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 140/274 (51%), Positives = 183/274 (66%)
Query: 1 MPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRD 60
MPYP+N ETA VE I+R+ GA+PATIAIL G VGL+ +E+E L K G + KT+RRD
Sbjct: 34 MPYPKNAETALNVEKIIRDKGAIPATIAILNGKLKVGLTKDEIEYLGKKGKEVVKTSRRD 93
Query: 61 IAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPV 120
I ++A + +GATTV++TM A++ GI VF TGGIGGVHR + + DIS+DL EL T V
Sbjct: 94 IPFILAKKLDGATTVASTMIVANLAGIKVFGTGGIGGVHRGAQESFDISADLQELANTNV 153
Query: 121 AVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARL 180
AVV AG KSILDI TLEYLET GV V + T E PAF+T SG KV RVD+ ++ A
Sbjct: 154 AVVCAGAKSILDIGLTLEYLETQGVPVVGFGTEELPAFYTRKSGFKVDYRVDTAKELAEA 213
Query: 181 IDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLARVN 240
+ L L G+V+G PIP E+ I AI A++EA EK I G TPFLLA+V
Sbjct: 214 LKAKWDLGLKGGMVVGNPIPEEYQMDYDTITKAINDAVKEAEEKGIKGKESTPFLLAKVK 273
Query: 241 ELTGGLSLASNIALVKNNALIGAKISVALAQLRQ 274
++T G SL +NI LV NN + + +++ L++L +
Sbjct: 274 DITKGKSLEANIQLVYNNVAVASDLAIELSKLNK 307
>sp|Q1M4T3|PSUG2_RHIL3 Pseudouridine-5'-phosphate glycosidase 2 OS=Rhizobium leguminosarum
bv. viciae (strain 3841) GN=psuG2 PE=3 SV=1
Length = 309
Score = 273 bits (699), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 152/276 (55%), Positives = 190/276 (68%), Gaps = 5/276 (1%)
Query: 1 MPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKA-QKTARR 59
MPYP N ETA VE ++R NGA+PATIA+++G VGL +ELE LA+ SK K + R
Sbjct: 34 MPYPANLETALGVETVIRENGAIPATIAVVKGELRVGLEHDELEELAQ--SKGIVKASGR 91
Query: 60 DIAHVVATRGNGA-TTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRT 118
D+A V RG A TTVSATM A + GI VF TGG+GGVHR E T DIS+DLTELGRT
Sbjct: 92 DLA-VAMIRGQSAGTTVSATMLMADLAGIDVFATGGVGGVHRGAEQTFDISADLTELGRT 150
Query: 119 PVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCA 178
AVV AG+KSILDI +TLEYLET V V AY T +FPAFFT SG K R+D+PE+ A
Sbjct: 151 KTAVVCAGVKSILDIAKTLEYLETQRVPVIAYGTEDFPAFFTRRSGFKADHRLDTPEEIA 210
Query: 179 RLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLAR 238
+ + ++ +L G+GL+I PIP A + I+ I A+R+A E+ I TPFLLAR
Sbjct: 211 KAMWLHHQLGTGTGLLIANPIPEASALAPDFIDGTIADAVRDADERGIDRKELTPFLLAR 270
Query: 239 VNELTGGLSLASNIALVKNNALIGAKISVALAQLRQ 274
+NELT G SL +NI LVKNNA + A+I+VA A L++
Sbjct: 271 INELTKGESLKANIELVKNNARLAARIAVAYAPLKK 306
>sp|A6TL60|PSUG_ALKMQ Pseudouridine-5'-phosphate glycosidase OS=Alkaliphilus
metalliredigens (strain QYMF) GN=psuG PE=3 SV=1
Length = 307
Score = 269 bits (688), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 144/272 (52%), Positives = 184/272 (67%), Gaps = 1/272 (0%)
Query: 1 MPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRD 60
MPYPQN ETAK+VE ++R GAVPATIAI++G VGL+ EEL L + K +RRD
Sbjct: 36 MPYPQNVETAKKVEDMIREGGAVPATIAIVKGKIKVGLTEEELMFLGQ-SKDVVKASRRD 94
Query: 61 IAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPV 120
+ ++A NGATTV++TM A++ GI VFVTGGIGGVHR + T+DIS+DL EL +T V
Sbjct: 95 LPLIIAKELNGATTVASTMIIAALAGIKVFVTGGIGGVHRGAQETLDISADLMELAQTNV 154
Query: 121 AVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARL 180
AVV AG+KSILDI TLE LETHGV + Y+T +FPAF+T SG V V + E+ AR
Sbjct: 155 AVVCAGVKSILDIGLTLEVLETHGVPIVGYQTEDFPAFYTRKSGYGVDYAVANVEELARA 214
Query: 181 IDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLARVN 240
+ L L G+V+ PIP +A +I AI A++EA K I G TPFLL ++
Sbjct: 215 LKAKWDLDLKGGVVVANPIPEAYAMDEALITQAIDEAVQEAAAKGIQGKETTPFLLTKIK 274
Query: 241 ELTGGLSLASNIALVKNNALIGAKISVALAQL 272
E+T G SL SNI LV NNA IGA+++VAL +L
Sbjct: 275 EITEGKSLESNIELVFNNAKIGAELAVALHRL 306
>sp|Q2SM69|PSUG_HAHCH Pseudouridine-5'-phosphate glycosidase OS=Hahella chejuensis
(strain KCTC 2396) GN=psuG PE=3 SV=1
Length = 303
Score = 269 bits (687), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 137/258 (53%), Positives = 177/258 (68%)
Query: 1 MPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRD 60
MP+PQN ETA +VE IVR+NGAVPATIAI++G VGLS EE+E L K G K +RRD
Sbjct: 33 MPWPQNAETALQVEQIVRDNGAVPATIAIIKGRLKVGLSKEEIEYLGKAGLNVTKASRRD 92
Query: 61 IAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPV 120
I ++A G+GATTV++TM A+M G+ VF TGGIGGVHR + T DIS+DL EL T V
Sbjct: 93 IPFIIARGGDGATTVASTMILAAMAGVKVFATGGIGGVHRGAQETFDISADLQELAHTNV 152
Query: 121 AVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARL 180
AV+ AG KSILD+ T EYLETHGV + Y+T+ PAF+T S V ++D+PE A+
Sbjct: 153 AVICAGAKSILDLGLTREYLETHGVPLVGYQTSTLPAFYTRDSDFDVDYQLDTPEQIAQA 212
Query: 181 IDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLARVN 240
+ ++ L G+VI PIP +A I++AI +AL E +K ++G TPFLLA+V
Sbjct: 213 LQAKWEMGLQGGVVIANPIPEAYAMDRGKIDAAISAALAEMDDKGVSGKDSTPFLLAKVA 272
Query: 241 ELTGGLSLASNIALVKNN 258
E+TGG SL +NI LV NN
Sbjct: 273 EITGGDSLKANIQLVFNN 290
>sp|Q01RY8|PSUG_SOLUE Pseudouridine-5'-phosphate glycosidase OS=Solibacter usitatus
(strain Ellin6076) GN=psuG PE=3 SV=1
Length = 299
Score = 268 bits (686), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 142/270 (52%), Positives = 186/270 (68%), Gaps = 3/270 (1%)
Query: 1 MPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSK-AQKTARR 59
MPYP+N TA+ +E+ VR GAVPATIA++ G+ CVGLS +ELE LA G+K K +R
Sbjct: 31 MPYPENLATARSLESQVRAGGAVPATIAVIGGVICVGLSDKELEWLA--GAKNVLKLSRN 88
Query: 60 DIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTP 119
D+ + +AT+ GATTV+ATM A++ GI +F TGGIGGVHR E T DIS+DL E RT
Sbjct: 89 DLPYAIATQKIGATTVAATMIAANLAGIRIFATGGIGGVHRGAETTFDISADLEEFARTS 148
Query: 120 VAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCAR 179
VAVV AG K+ILD+P+TLEYLET GV V AY T+EFPAF++ SG K P R+D+P + AR
Sbjct: 149 VAVVCAGAKAILDLPKTLEYLETRGVPVIAYGTDEFPAFWSRQSGLKAPLRLDTPAEIAR 208
Query: 180 LIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLARV 239
++V L L G VI P+P E + + I SA+ EA I G A TP++LAR+
Sbjct: 209 FLEVKWSLNLTGGAVICNPVPAEDEIPFHEMRTFIDSAVDEAERYGIKGKAVTPYILARI 268
Query: 240 NELTGGLSLASNIALVKNNALIGAKISVAL 269
ELTGG SL +N+AL +NNA + A+++ L
Sbjct: 269 VELTGGRSLRTNMALAQNNARLAAELATHL 298
>sp|Q8RCT3|PSUG_THETN Pseudouridine-5'-phosphate glycosidase OS=Thermoanaerobacter
tengcongensis (strain DSM 15242 / JCM 11007 / NBRC
100824 / MB4) GN=psuG PE=3 SV=1
Length = 307
Score = 267 bits (683), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 150/275 (54%), Positives = 188/275 (68%), Gaps = 1/275 (0%)
Query: 1 MPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRD 60
MPYPQN ETA+ +E IVR NGAVPATIAI+ G +GL+ EELE + + K ++RD
Sbjct: 33 MPYPQNIETARALEEIVRENGAVPATIAIIGGKIKIGLNEEELEFMGT-SKEILKASKRD 91
Query: 61 IAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPV 120
+ V+A N ATTVSATM A++ GI VFVTGGIGGVHR E T DIS+DL EL T V
Sbjct: 92 LPVVLAKGLNAATTVSATMICANLAGIKVFVTGGIGGVHRGAEETFDISADLQELANTNV 151
Query: 121 AVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARL 180
AVV AG K+ILD+PRTLEYLET GV V ++T EFPAF+T SG KV RV+ + A++
Sbjct: 152 AVVCAGAKAILDLPRTLEYLETFGVPVIGFRTEEFPAFYTRESGLKVDYRVEDEVEAAKV 211
Query: 181 IDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLARVN 240
I L L G++I PIP E+A IE AI+ A+ EA + I G A TPFLL ++
Sbjct: 212 IKTKWDLGLKGGILIANPIPEEYALDRAYIEKAIEEAIFEADRRGIRGKALTPFLLEKIK 271
Query: 241 ELTGGLSLASNIALVKNNALIGAKISVALAQLRQQ 275
+LT G SL +NI LVKNNA +GAKI+V L +L ++
Sbjct: 272 DLTEGKSLKANIELVKNNARVGAKIAVQLNKLYKE 306
>sp|Q5L078|PSUG_GEOKA Pseudouridine-5'-phosphate glycosidase OS=Geobacillus kaustophilus
(strain HTA426) GN=psuG PE=3 SV=1
Length = 301
Score = 267 bits (682), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 139/256 (54%), Positives = 178/256 (69%), Gaps = 1/256 (0%)
Query: 1 MPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRD 60
MPYP+N +TAK+VE I+R+ GAVPATIAI +GL+ ELE+L +K +RRD
Sbjct: 33 MPYPENVQTAKDVERIIRDRGAVPATIAIFNEKIKIGLTEGELEQLGT-SHDVEKVSRRD 91
Query: 61 IAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPV 120
+ +VVA + +GATTV+ TM A M GI VF TGGIGGVHR E TMDIS+DL EL RT V
Sbjct: 92 LPYVVAMKKHGATTVAGTMICAEMAGIRVFATGGIGGVHRGAEQTMDISADLQELARTNV 151
Query: 121 AVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARL 180
AVV AG KSILD+ TLEYLETHGV V Y+T+ PAF++ TS +V R+DS ++ A+
Sbjct: 152 AVVCAGAKSILDLGLTLEYLETHGVPVIGYQTDVLPAFYSRTSPFRVDYRLDSAKEIAQF 211
Query: 181 IDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLARVN 240
++ KL L G+VI P+P+E I + I+ AL+EA +++ITG + TPFLL RV
Sbjct: 212 LETKWKLGLNGGVVIANPVPKEEELEESYITAIIEQALKEAEKQHITGKSVTPFLLDRVK 271
Query: 241 ELTGGLSLASNIALVK 256
LTGG SL +NIALVK
Sbjct: 272 TLTGGKSLQANIALVK 287
>sp|A9BJN0|PSUG_PETMO Pseudouridine-5'-phosphate glycosidase OS=Petrotoga mobilis (strain
DSM 10674 / SJ95) GN=psuG PE=3 SV=1
Length = 306
Score = 266 bits (681), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 137/266 (51%), Positives = 181/266 (68%), Gaps = 1/266 (0%)
Query: 1 MPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRD 60
MPYPQN E AK VE +R GAVPATIAI++G VGLS EELE +A K +R D
Sbjct: 35 MPYPQNVEVAKNVEETIRERGAVPATIAIIDGKMKVGLSKEELEFMAT-SKNILKASRMD 93
Query: 61 IAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPV 120
+ ++A N ATTV+ATM A + GI VFVTGGIGGVHR+ + T DIS+DL EL +T V
Sbjct: 94 LPVILAKGFNAATTVAATMIIAELAGIKVFVTGGIGGVHRNAQETFDISADLQELAKTNV 153
Query: 121 AVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARL 180
AV+SAG K+ILD+ T EYLET GV V Y+T+E P FF+ SG VP RV++P++ A +
Sbjct: 154 AVISAGPKAILDLQLTKEYLETFGVPVIGYQTDELPCFFSRESGINVPYRVETPKEIASI 213
Query: 181 IDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLARVN 240
+ L L G+ I PIP+E++ I+ I++A+ EA+++ I G TPFLL+++N
Sbjct: 214 MKTKWDLGLQGGIFIANPIPKEYSLDFEEIDKTIENAIEEAKKRKIKGKELTPFLLSKIN 273
Query: 241 ELTGGLSLASNIALVKNNALIGAKIS 266
ELT G SL +NI LV NNA +GA+I+
Sbjct: 274 ELTKGESLKANIELVYNNAQLGAEIA 299
>sp|P33025|PSUG_ECOLI Pseudouridine-5'-phosphate glycosidase OS=Escherichia coli (strain
K12) GN=psuG PE=1 SV=1
Length = 312
Score = 264 bits (674), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 142/266 (53%), Positives = 174/266 (65%)
Query: 1 MPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRD 60
MP+PQN +TA EVE +R GAVPATIAI+ G+ VGLS EE+E L + G K +RRD
Sbjct: 39 MPFPQNAQTAIEVEETIRKQGAVPATIAIIGGVMKVGLSKEEIELLGREGHNVTKVSRRD 98
Query: 61 IAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPV 120
+ VVA NGATTV++TM A++ GI VF TGGIGGVHR EHT DIS+DL EL T V
Sbjct: 99 LPFVVAAGKNGATTVASTMIIAALAGIKVFATGGIGGVHRGAEHTFDISADLQELANTNV 158
Query: 121 AVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARL 180
VV AG KSILD+ T EYLET GV + Y+T PAFF TS V R+DS + AR
Sbjct: 159 TVVCAGAKSILDLGLTTEYLETFGVPLIGYQTKALPAFFCRTSPFDVSIRLDSASEIARA 218
Query: 181 IDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLARVN 240
+ V + L GLV+ PIP + A I +AI A+ EA + + G TPFLLARV
Sbjct: 219 MVVKWQSGLNGGLVVANPIPEQFAMPEHTINAAIDQAVAEAEAQGVIGKESTPFLLARVA 278
Query: 241 ELTGGLSLASNIALVKNNALIGAKIS 266
ELTGG SL SNI LV NNA++ ++I+
Sbjct: 279 ELTGGDSLKSNIQLVFNNAILASEIA 304
>sp|B6IRJ4|PSUG_RHOCS Pseudouridine-5'-phosphate glycosidase OS=Rhodospirillum centenum
(strain ATCC 51521 / SW) GN=psuG PE=3 SV=1
Length = 320
Score = 259 bits (663), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 148/277 (53%), Positives = 190/277 (68%), Gaps = 2/277 (0%)
Query: 1 MPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRD 60
+P P N ETA+ +EA VR NGAVPATIA+L+G VGL E+++RLA G+ K +RRD
Sbjct: 33 LPAPANLETAQAIEAAVRANGAVPATIAVLDGRIRVGLDAEDMQRLAAPGT--AKVSRRD 90
Query: 61 IAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPV 120
+ V+A +GATTV+ATM A + GI VF TGGIGGVHR E T DIS+DL EL T V
Sbjct: 91 LPLVLAKGADGATTVAATMIAADLAGIAVFATGGIGGVHRGVETTGDISADLEELATTSV 150
Query: 121 AVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARL 180
AVV AG K+ILD+PRTLEYLET GV V + T+ FPAF+ SG V R D+PED AR+
Sbjct: 151 AVVCAGAKAILDLPRTLEYLETRGVPVVGFGTDAFPAFYHRDSGLPVDGRCDTPEDAARV 210
Query: 181 IDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLARVN 240
++ +L L G+V+ VPIP E A E+A+Q A+ EA + G A TPFLL R+
Sbjct: 211 LNAKWRLGLAGGIVVAVPIPDEAALDAAQAEAAVQQAVAEAATGGVRGKALTPFLLHRLE 270
Query: 241 ELTGGLSLASNIALVKNNALIGAKISVALAQLRQQES 277
LTGG SL +N AL+ NNA +GA+I+VA A+L+Q+ +
Sbjct: 271 TLTGGASLTANRALLLNNAAVGARIAVAYARLKQETT 307
>sp|Q5ZU79|PSUG_LEGPH Pseudouridine-5'-phosphate glycosidase OS=Legionella pneumophila
subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 /
DSM 7513) GN=psuG PE=3 SV=1
Length = 308
Score = 258 bits (660), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 136/271 (50%), Positives = 184/271 (67%), Gaps = 3/271 (1%)
Query: 1 MPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRD 60
MPYP N TA EVE I+R GA+PATIA+ +G VGL+ E +E LA L + K +RRD
Sbjct: 34 MPYPDNLTTAIEVENIIRRQGAIPATIAMHQGKIRVGLTQEVMEHLA-LQKEVIKASRRD 92
Query: 61 IAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPV 120
I+ V++ + +TTV+ATMF A M +P+FVTGGIGGVH+ + DIS+DL EL TPV
Sbjct: 93 ISFVLSRKVTASTTVAATMFCAHMAKLPLFVTGGIGGVHQDVTMSFDISADLIELSNTPV 152
Query: 121 AVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARL 180
VV +G KSILD+P+TLE LET GV V Y T+EFPAF++ +SG VP R++S E+ A L
Sbjct: 153 TVVCSGAKSILDLPKTLEVLETFGVPVIGYATDEFPAFYSRSSGIPVPQRLNSAEEVANL 212
Query: 181 IDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLARVN 240
+ + KL + +G+V+ PIP S I I+ A EA K+++G + TPFLL R+
Sbjct: 213 MSIQQKLNMKNGIVVANPIPVSAELSDEEISPYIKQAHDEA--KHMSGKSLTPFLLKRIA 270
Query: 241 ELTGGLSLASNIALVKNNALIGAKISVALAQ 271
ELT G SL +NI L+KNNA +GA+I++A +
Sbjct: 271 ELTAGKSLEANIELIKNNAFLGAEIAIAYQK 301
>sp|Q46PS3|PSUG_CUPPJ Pseudouridine-5'-phosphate glycosidase OS=Cupriavidus
pinatubonensis (strain JMP134 / LMG 1197) GN=psuG PE=3
SV=2
Length = 314
Score = 258 bits (658), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 139/259 (53%), Positives = 173/259 (66%), Gaps = 1/259 (0%)
Query: 1 MPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRD 60
MPYP+N TA EVEA++ GA PATIA+++G VGLS +ELERL + G KA K +RRD
Sbjct: 38 MPYPENVRTAHEVEALILELGAEPATIALIDGRIRVGLSDDELERLGRSG-KAHKVSRRD 96
Query: 61 IAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPV 120
+ V+ + GATTV+ TM A++ GI VFVTGGIGGVHR + T DIS+DL EL RT V
Sbjct: 97 LPAVLTSGELGATTVAGTMICAALAGIEVFVTGGIGGVHRGAQETFDISADLQELARTSV 156
Query: 121 AVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARL 180
AVV AG KSILDI TLEYLET GV V + F AF+ SG + R+D P + AR
Sbjct: 157 AVVCAGAKSILDIGLTLEYLETQGVPVLTCEQENFAAFYKRDSGFRADYRLDDPAEQARF 216
Query: 181 IDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLARVN 240
I L L G+++ P+P A + I++ Q AL EA+ + ITG A TPFLLAR+
Sbjct: 217 IRTKWDLGLAGGVLLSTPVPEAAAMASEEIDALTQQALDEAQAQGITGKAVTPFLLARIK 276
Query: 241 ELTGGLSLASNIALVKNNA 259
LTGG SLA+NIALVK+NA
Sbjct: 277 ALTGGRSLATNIALVKHNA 295
>sp|B8F668|PSUG_HAEPS Pseudouridine-5'-phosphate glycosidase OS=Haemophilus parasuis
serovar 5 (strain SH0165) GN=psuG PE=3 SV=1
Length = 302
Score = 255 bits (652), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 134/267 (50%), Positives = 177/267 (66%), Gaps = 1/267 (0%)
Query: 1 MPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRD 60
MPYPQN A+EVE I+R+NGAVPATIAI++G +GLS +ELE A K +RRD
Sbjct: 33 MPYPQNVAMAREVEQIIRDNGAVPATIAIIDGKIRIGLSDDELELFGSSKGIA-KVSRRD 91
Query: 61 IAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPV 120
+ ++A++ GATTV++TM A + GI FVTGG+GGVH+ E T+DIS+DL EL +T V
Sbjct: 92 LPQIIASKKLGATTVASTMICAHLAGIKFFVTGGLGGVHKGWETTLDISADLDELAQTSV 151
Query: 121 AVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARL 180
V+ AG KSILD+ TLEYLET GV V YKT PAFFT SG + + + A +
Sbjct: 152 TVICAGAKSILDLDATLEYLETKGVPVVGYKTKNLPAFFTRDSGLPLALSCEELTEIAEM 211
Query: 181 IDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLARVN 240
I V +L L G+V+ PIP+E + I I +A++EA EK I G TPFLL ++
Sbjct: 212 IKVKWQLGLEGGVVVANPIPQEDELAPSYINGIIDTAVKEAEEKGIIGKDITPFLLGKIV 271
Query: 241 ELTGGLSLASNIALVKNNALIGAKISV 267
E+T G SL +NI LVKNNA +GA+++V
Sbjct: 272 EMTEGKSLEANIKLVKNNAKVGARLAV 298
>sp|C0QZV6|PSUG_BRAHW Pseudouridine-5'-phosphate glycosidase OS=Brachyspira
hyodysenteriae (strain ATCC 49526 / WA1) GN=psuG PE=3
SV=1
Length = 308
Score = 255 bits (651), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 130/274 (47%), Positives = 178/274 (64%), Gaps = 1/274 (0%)
Query: 1 MPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRD 60
MPYP+N E+A E +R N AVPATIAI++G VGL+ EELE + K++RRD
Sbjct: 36 MPYPENVESALNSEKNIRENNAVPATIAIIKGRIKVGLNKEELEYMGS-NKNIAKSSRRD 94
Query: 61 IAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPV 120
+ ++A + +GATTV+ TM AS+ GI VF TGGIGGVHR+ + T DIS+DL EL +T V
Sbjct: 95 LPVMLALKKDGATTVTTTMIGASLAGIKVFATGGIGGVHRYAQETFDISADLQELSKTNV 154
Query: 121 AVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARL 180
AVV AG KSILDI T+EYLET G+ V YKT FPAF+T SG KV ++D+ +D A +
Sbjct: 155 AVVCAGAKSILDIGLTIEYLETFGIPVLGYKTENFPAFYTRESGYKVDYKIDTTKDIANI 214
Query: 181 IDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLARVN 240
+D KL L G+++ PIP E+ I I ++EAR+KNI+G TP++LA+++
Sbjct: 215 LDTKWKLGLNGGVLVCNPIPEEYEMDKDYINKIIDETVKEARDKNISGKDVTPYILAKLH 274
Query: 241 ELTGGLSLASNIALVKNNALIGAKISVALAQLRQ 274
+T SL +N LV NN + A I+ + L +
Sbjct: 275 SVTENKSLKANKELVYNNCRVAANIAYDYSNLSR 308
>sp|A1SQN1|PSUG_NOCSJ Pseudouridine-5'-phosphate glycosidase OS=Nocardioides sp. (strain
BAA-499 / JS614) GN=psuG PE=3 SV=1
Length = 307
Score = 255 bits (651), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 140/273 (51%), Positives = 180/273 (65%), Gaps = 1/273 (0%)
Query: 1 MPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRD 60
MPYPQN A EVE I+R GAVPATIA+LEG P +GL+ ++LE LA K + RD
Sbjct: 36 MPYPQNVAMATEVEGIIRAAGAVPATIAVLEGRPRIGLTADDLELLAS-DEDVAKVSVRD 94
Query: 61 IAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPV 120
+ VVA R +GATTV+ATM A++ GI VFVTGG+GGVHR + + D S+DLTELG T V
Sbjct: 95 LPFVVARRSHGATTVAATMRLAALAGIRVFVTGGLGGVHRGAQQSFDESADLTELGSTDV 154
Query: 121 AVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARL 180
AV+SAG+KSILDI TLE LET GV V AY ++EFP+F++ +SG P RVDS + A +
Sbjct: 155 AVISAGVKSILDIGLTLERLETLGVPVLAYGSDEFPSFYSRSSGHAAPMRVDSAAEVAAV 214
Query: 181 IDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLARVN 240
+ L + G+V+ PIP I I+ AL + + I GN TP+LL R+
Sbjct: 215 MAAKWDLGIAGGVVVANPIPEADEIPADEIGGIIEQALADMAARGIHGNEATPYLLGRIV 274
Query: 241 ELTGGLSLASNIALVKNNALIGAKISVALAQLR 273
E+TGG SL +NIALV+ NA +GA I+ A LR
Sbjct: 275 EITGGASLTANIALVRANARLGASIAREYAGLR 307
>sp|A8LQI0|PSUG_DINSH Pseudouridine-5'-phosphate glycosidase OS=Dinoroseobacter shibae
(strain DFL 12) GN=psuG PE=3 SV=1
Length = 305
Score = 254 bits (649), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 135/269 (50%), Positives = 177/269 (65%), Gaps = 1/269 (0%)
Query: 1 MPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRD 60
MP+P N E AK VE +R GA+PATIA+L+G+ +GL +ELE LAK+ A K +R D
Sbjct: 36 MPFPDNVEMAKAVEEEIRARGAIPATIAVLDGVLKIGLGADELEALAKV-KDALKISRAD 94
Query: 61 IAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPV 120
I + ++ + TTV+ATM A M GI VF TGGIGGVH+ E + DIS+DLTELGRT V
Sbjct: 95 IGYAISQGKSAGTTVAATMIVAQMAGIRVFATGGIGGVHKGVETSFDISADLTELGRTDV 154
Query: 121 AVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARL 180
VV+AG K+ILD+P+TLE LET GV V Y+T+ PAF+T S +P R+DS + +
Sbjct: 155 IVVAAGAKAILDVPKTLEVLETQGVSVVGYRTDTLPAFWTSGSDLDIPLRLDSAAEISEF 214
Query: 181 IDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLARVN 240
V L+LG G+++ PIP +I I +A E ++I+G A TPFLL R+
Sbjct: 215 QKVRDALRLGGGMLVANPIPAGDEIPAEIINGYIATAQAEMAAQSISGKAVTPFLLQRIF 274
Query: 241 ELTGGLSLASNIALVKNNALIGAKISVAL 269
EL+ G SL SNIALVKNNA + A I+VAL
Sbjct: 275 ELSEGRSLRSNIALVKNNARLAADIAVAL 303
>sp|A9GT78|PSUG_SORC5 Pseudouridine-5'-phosphate glycosidase OS=Sorangium cellulosum
(strain So ce56) GN=psuG PE=3 SV=1
Length = 317
Score = 253 bits (645), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 143/258 (55%), Positives = 180/258 (69%), Gaps = 1/258 (0%)
Query: 1 MPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRD 60
MPYPQN E + VEA+VR NGAVPATIAI++G VG+ E+LERLA+ G KA K +RRD
Sbjct: 35 MPYPQNLEMVRRVEAVVRRNGAVPATIAIMDGKLRVGVKGEDLERLARGGGKAAKASRRD 94
Query: 61 IAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPV 120
+A ++ G TTV+ TM A+ GI VF TGGIGGVHR E T DIS+DL EL +T V
Sbjct: 95 VAALLVLGGMAGTTVATTMMAAAWAGIQVFATGGIGGVHRGAETTFDISADLEELSQTQV 154
Query: 121 AVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARL 180
AVV AG KSILDIP+TLE LETHGV V YKT +FPAF+ SG KV R++S E+ AR+
Sbjct: 155 AVVCAGAKSILDIPKTLETLETHGVPVLGYKTEDFPAFWARQSGQKVDHRIESAEEAARV 214
Query: 181 IDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLARVN 240
I + +L +G G+++ PIP HA R IE+ I+ A+R A + ++ TPFLL R+
Sbjct: 215 IALQFELGMG-GVLVANPIPESHAMDARAIEARIEEAIRCAEAEGVSRKDLTPFLLKRIF 273
Query: 241 ELTGGLSLASNIALVKNN 258
ELT G SL +NIALV+NN
Sbjct: 274 ELTEGKSLIANIALVENN 291
>sp|A9NGD7|PSUG_ACHLI Pseudouridine-5'-phosphate glycosidase OS=Acholeplasma laidlawii
(strain PG-8A) GN=psuG PE=3 SV=1
Length = 303
Score = 248 bits (632), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 134/272 (49%), Positives = 172/272 (63%), Gaps = 1/272 (0%)
Query: 1 MPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRD 60
MPYP+N ETA VE IV NGA+PATIAI++G VGL+ EL L KL S K ++RD
Sbjct: 33 MPYPKNVETALNVEKIVEQNGAIPATIAIIDGRIKVGLNPNELTSLGKL-SNVLKVSKRD 91
Query: 61 IAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPV 120
I + V + +GATTVSAT+ A MVGI VF TGGIGGVH+ T DIS DL E+ V
Sbjct: 92 IPYCVIKKYSGATTVSATILIADMVGIKVFATGGIGGVHKDAAATFDISRDLEEISEKQV 151
Query: 121 AVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARL 180
AVVSAG K+ILD+ TLEYLET GV V YKT+EFPAFF+ SG ++D A+L
Sbjct: 152 AVVSAGAKAILDLDLTLEYLETKGVEVIGYKTSEFPAFFSNASGLNTTFQLDEASQIAQL 211
Query: 181 IDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLARVN 240
+ + L G+V+ PIP+ +A ++ AI SA+ A++ ITG TP+LL ++
Sbjct: 212 MYTKWNMGLSGGIVVANPIPQNYAIDKDSLDKAISSAILSAKDNKITGKELTPYLLKMLH 271
Query: 241 ELTGGLSLASNIALVKNNALIGAKISVALAQL 272
SL SNI L+ NNA I A I+V ++L
Sbjct: 272 SNKDITSLESNIGLIYNNAKIAALIAVEFSKL 303
>sp|Q1MFZ6|PSUG1_RHIL3 Pseudouridine-5'-phosphate glycosidase 1 OS=Rhizobium leguminosarum
bv. viciae (strain 3841) GN=psuG1 PE=3 SV=1
Length = 317
Score = 244 bits (624), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 134/271 (49%), Positives = 179/271 (66%), Gaps = 1/271 (0%)
Query: 1 MPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRD 60
MPYP N E A+ VEAI+R GAVPATIA++ G +GL ELE+LAK ++ K +R D
Sbjct: 48 MPYPGNIEMARSVEAIIREQGAVPATIAVIHGTLHIGLEAAELEQLAK-ATEVMKVSRAD 106
Query: 61 IAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPV 120
+A +A R GATTV+ATM A+ GI VF TGGIGGVHR E + DIS+DL EL RT V
Sbjct: 107 LAFAIAERRTGATTVAATMIAAARAGIRVFATGGIGGVHRGAEESFDISADLEELARTGV 166
Query: 121 AVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARL 180
VV AG K+ILDIP+TLE LET GV V Y++ EFPAF++ +SG + P ++SP A
Sbjct: 167 IVVCAGAKAILDIPKTLEVLETRGVPVVTYESEEFPAFWSRSSGIRSPLSLNSPAAIANF 226
Query: 181 IDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLARVN 240
V +L + G+++ P+P + +E I+ AL A +TG A TP+LL+ +
Sbjct: 227 QTVREQLGIDGGMLVANPVPEADEIASEEMEIYIERALDSAERDEVTGKAVTPYLLSTIF 286
Query: 241 ELTGGLSLASNIALVKNNALIGAKISVALAQ 271
+LT G SL +NIALV+NNA + A+I+VAL +
Sbjct: 287 DLTDGQSLKTNIALVENNARLAAEIAVALGE 317
>sp|Q28PY7|PSUG_JANSC Pseudouridine-5'-phosphate glycosidase OS=Jannaschia sp. (strain
CCS1) GN=psuG PE=3 SV=1
Length = 302
Score = 241 bits (615), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 138/269 (51%), Positives = 174/269 (64%), Gaps = 1/269 (0%)
Query: 1 MPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRD 60
MPYPQN +TA+ VEA VR GAVPATIAI++G +GL+ ELE LA+ A K +R D
Sbjct: 33 MPYPQNLDTARAVEAEVRAAGAVPATIAIMDGRMHIGLTGTELEVLAQADGVA-KLSRAD 91
Query: 61 IAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPV 120
+A +A G GATTV+ATM A++ GI VF TGGIGGVH+ E T DIS+DL EL TPV
Sbjct: 92 LAACLARGGVGATTVAATMICAALAGIHVFATGGIGGVHKGAEDTFDISADLRELAHTPV 151
Query: 121 AVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARL 180
V++AG K+ILD+P+TLE LET GV V A+ + FPAF++ SG P R DS + AR
Sbjct: 152 TVIAAGAKAILDLPKTLEVLETLGVPVIAHGQDAFPAFWSRDSGLPAPLRADSATEIARA 211
Query: 181 IDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLARVN 240
+ KL L G ++ PIP + + I A EA K + A TPFLL R+
Sbjct: 212 HLMRSKLGLPGGQLVANPIPEDAEIPASTLAPLIVQAQSEADAKGVARKAVTPFLLNRLF 271
Query: 241 ELTGGLSLASNIALVKNNALIGAKISVAL 269
ELT G +LASNIALV NNA +GA ++ AL
Sbjct: 272 ELTDGATLASNIALVLNNARLGAAVARAL 300
>sp|Q9RS16|PSUG_DEIRA Pseudouridine-5'-phosphate glycosidase OS=Deinococcus radiodurans
(strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 /
NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) GN=psuG PE=3
SV=1
Length = 313
Score = 239 bits (611), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 132/258 (51%), Positives = 166/258 (64%), Gaps = 1/258 (0%)
Query: 1 MPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRD 60
MPYPQN E A+ VE IVR+NGAVPATIA+L G VGLS +ELE LA QK + RD
Sbjct: 42 MPYPQNVEMARGVEQIVRDNGAVPATIAVLGGRLKVGLSADELELLAT-DKAVQKISTRD 100
Query: 61 IAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPV 120
+ VA G+GATTV++TM A++ GI VF TGG GGVHR TMDIS+DL EL RT V
Sbjct: 101 LPVTVALGGHGATTVASTMRIAALAGIRVFATGGTGGVHRGAGETMDISADLLELARTDV 160
Query: 121 AVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARL 180
VVSAG+KSILDI TLE LET GV +EFPAF++ SG P V +P + AR+
Sbjct: 161 CVVSAGVKSILDIGLTLEVLETQGVPAITLGADEFPAFYSRRSGFSSPLTVQTPAEAARV 220
Query: 181 IDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLARVN 240
+ V L L G+++ P+P +E+ I AL + ++G TP+LL R+
Sbjct: 221 LKVKWDLGLTGGVLLANPVPETAEIPAEEMETHITRALADMAALGLSGKDTTPYLLGRIV 280
Query: 241 ELTGGLSLASNIALVKNN 258
ELTGG SL +NIALV++N
Sbjct: 281 ELTGGRSLETNIALVRHN 298
>sp|Q67N11|PSUG_SYMTH Pseudouridine-5'-phosphate glycosidase OS=Symbiobacterium
thermophilum (strain T / IAM 14863) GN=psuG PE=3 SV=1
Length = 308
Score = 239 bits (609), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 139/273 (50%), Positives = 181/273 (66%), Gaps = 5/273 (1%)
Query: 1 MPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRD 60
MPYP+N TA+EVE IVR+ GAVPATIA++ G VGL+ EELE LA +A K + RD
Sbjct: 33 MPYPENLRTAREVEEIVRSQGAVPATIAVIGGRCKVGLTDEELELLAT-SPEAVKVSLRD 91
Query: 61 IAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGE----HTMDISSDLTELG 116
+ V+A + GATTV+ T A+ GI VFVTGGIGGVHR D+S+DLT LG
Sbjct: 92 LPVVLARKSLGATTVATTATIAAAAGIEVFVTGGIGGVHRKSPGDPAQMWDVSADLTVLG 151
Query: 117 RTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPED 176
RT + VV AG KS+LDI TLE LET GV V Y+T+ FP F+T +G V RVD+PE+
Sbjct: 152 RTDITVVCAGAKSVLDIGATLEVLETLGVTVLGYRTDRFPGFYTRDTGFGVDARVDTPEE 211
Query: 177 CARLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLL 236
A +I + L G+++ P+P EHA +E I AL+ + +TG A TP+LL
Sbjct: 212 AAAVIHARQQTMLPGGVLVVNPVPEEHAMDPDEVERHIADALKAMAAEGVTGKAVTPYLL 271
Query: 237 ARVNELTGGLSLASNIALVKNNALIGAKISVAL 269
AR+ E+T G +L +NIALVK+NAL+GA+I+VAL
Sbjct: 272 ARLKEVTSGRALQTNIALVKHNALVGAQIAVAL 304
>sp|B5Y6G9|PSUG_COPPD Pseudouridine-5'-phosphate glycosidase OS=Coprothermobacter
proteolyticus (strain ATCC 35245 / DSM 5265 / BT)
GN=psuG PE=3 SV=1
Length = 302
Score = 236 bits (603), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 125/269 (46%), Positives = 173/269 (64%), Gaps = 1/269 (0%)
Query: 1 MPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRD 60
MPYP N TA EVE +++ GAVPATI ++ G+ VGLS EE+ L++ K + +D
Sbjct: 30 MPYPANLHTALEVEQVIKEAGAVPATIGVINGIIKVGLSEEEITYLSQ-AKDLHKISLKD 88
Query: 61 IAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPV 120
++ A + +G TTVSATMF + GI VF TGGIGGVHR + D+S+DL LG P+
Sbjct: 89 LSVAAAKKLSGGTTVSATMFASYKAGIQVFATGGIGGVHRDARESFDVSTDLEALGSIPI 148
Query: 121 AVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARL 180
VV AG K+ILD+P TLEYLET GV V YKT+EFPAF+ SG K+ V +P + A++
Sbjct: 149 TVVCAGAKAILDLPATLEYLETKGVLVVGYKTDEFPAFYYGRSGLKLEHSVTTPGELAQI 208
Query: 181 IDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLARVN 240
I L++ +++G P P E A +E I++AL++A+ NI G TPFLL +
Sbjct: 209 IRERDALEINKAILVGNPPPEEMALEKGKVEQLIEAALQQAKVNNIKGKDVTPFLLDYLA 268
Query: 241 ELTGGLSLASNIALVKNNALIGAKISVAL 269
+ + G +L +NIALVKNNA +G+ I+ AL
Sbjct: 269 KNSKGETLETNIALVKNNAYVGSLIAKAL 297
>sp|A5IXG3|PSUG_MYCAP Pseudouridine-5'-phosphate glycosidase OS=Mycoplasma agalactiae
(strain PG2) GN=psuG PE=3 SV=1
Length = 301
Score = 236 bits (602), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 128/273 (46%), Positives = 170/273 (62%), Gaps = 2/273 (0%)
Query: 1 MPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRD 60
MPYP+N E A VE I+R GAVPATIAI+ G+ VGL +E+ LAKL KT++RD
Sbjct: 31 MPYPKNVEMALNVENIIRKQGAVPATIAIINGIIHVGLENDEINELAKL-KDVIKTSKRD 89
Query: 61 IAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPV 120
+V+A + NG TTVS T+ A VGIPVF TGGIGGVHR E T DIS DL EL V
Sbjct: 90 FGYVLANKKNGGTTVSGTVLVAQKVGIPVFATGGIGGVHRGAEITFDISRDLDELSTNNV 149
Query: 121 AVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARL 180
VV AG K ILD+ TLEYLET GV V Y +++ PAF++ +S V V S + A +
Sbjct: 150 LVVCAGAKLILDLGLTLEYLETKGVEVLGYNSDKLPAFYSSSSEFNVTYNVHSASEVAAI 209
Query: 181 IDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLARVN 240
+ K G G+++ PIP ++ I I A+ +A+ + I+G TP+LL++V
Sbjct: 210 MKAKWKFTNG-GIILANPIPEQYGLEYEYILDNINKAIEQAKVEGISGKKTTPYLLSKVL 268
Query: 241 ELTGGLSLASNIALVKNNALIGAKISVALAQLR 273
ELT G SL +NI LV NNA + A+++V A+ +
Sbjct: 269 ELTEGKSLEANIQLVYNNAKVAAQVAVEYAKQK 301
>sp|Q98NQ8|PSUG_RHILO Pseudouridine-5'-phosphate glycosidase OS=Rhizobium loti (strain
MAFF303099) GN=psuG PE=3 SV=1
Length = 305
Score = 236 bits (602), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 131/269 (48%), Positives = 167/269 (62%), Gaps = 1/269 (0%)
Query: 1 MPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRD 60
MPYP N A VE I+ + GAVPATIA++ G +GLS E E LA G A K +R D
Sbjct: 38 MPYPDNGAMAANVEKIISDGGAVPATIAVIGGRIKIGLSDGERESLAMTGD-AMKLSRAD 96
Query: 61 IAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPV 120
+ VA G TTV+ATM A MVGI VF TGGIGGVH+ E + DIS+DL EL RTPV
Sbjct: 97 LGFAVAQGRTGGTTVAATMIAAEMVGIKVFATGGIGGVHKGAEKSFDISADLDELARTPV 156
Query: 121 AVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARL 180
VVSAG K+ILDI +TLE LET GV V + PAF++ S + P + PE+ A
Sbjct: 157 IVVSAGAKAILDIEKTLEVLETRGVPVVGHGCETMPAFWSRQSPFRAPLTLYKPEEIAHF 216
Query: 181 IDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLARVN 240
+ L LG G+++ P+P H + I++A + A N+TG A TPFLL ++
Sbjct: 217 FRTRVALGLGGGVLVANPVPENHEIPAEEMAGYIEAAQKAAEALNVTGKAVTPFLLGKIL 276
Query: 241 ELTGGLSLASNIALVKNNALIGAKISVAL 269
ELTGG SL +NIALV+NNA + A+I+ AL
Sbjct: 277 ELTGGRSLKTNIALVENNARLAAEIAKAL 305
>sp|Q9USY1|YOW5_SCHPO Pseudouridine-metabolizing bifunctional protein C1861.05
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC1861.05 PE=3 SV=1
Length = 747
Score = 234 bits (598), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 132/279 (47%), Positives = 179/279 (64%), Gaps = 2/279 (0%)
Query: 1 MPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRD 60
MPYPQN E A +VE+ VR+ GAVPATIA+L G +GL +L LAK G A K +RRD
Sbjct: 69 MPYPQNEELAIQVESKVRSMGAVPATIALLNGQCTIGLEQFQLSELAKSGETAYKVSRRD 128
Query: 61 IAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPV 120
+++V + R NG TTV+ATM A GI VF TGGIGGVHR E++MDIS+DL ELGRT V
Sbjct: 129 LSYVASQRLNGGTTVAATMILARAAGIDVFATGGIGGVHRGAENSMDISADLIELGRTRV 188
Query: 121 AVVSAGIKSILDIPRTLEYLETHGVCVAAY--KTNEFPAFFTETSGSKVPCRVDSPEDCA 178
AVVSAG+KSILDI RTLE LET GV V + FPAFF+ S + P +++P+ A
Sbjct: 189 AVVSAGVKSILDIGRTLEVLETQGVPVVTLGPPKSAFPAFFSRESKFQSPLSLETPQLIA 248
Query: 179 RLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLAR 238
++ N++L G ++ +P P + +E+ I++ L+ + + ITG TP+LL
Sbjct: 249 NMLFSNIQLGQECGTLVAIPTPHHCSIDYEKMEALIETCLQRSVQLGITGKNVTPWLLGE 308
Query: 239 VNELTGGLSLASNIALVKNNALIGAKISVALAQLRQQES 277
+ + G SL +NI LV NNA + I+ LA L+++ S
Sbjct: 309 LLRESKGKSLNTNIDLVLNNAEKASLIAKELAVLKEKSS 347
>sp|A5UT22|PSUG_ROSS1 Pseudouridine-5'-phosphate glycosidase OS=Roseiflexus sp. (strain
RS-1) GN=psuG PE=3 SV=1
Length = 311
Score = 234 bits (598), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 131/272 (48%), Positives = 175/272 (64%), Gaps = 4/272 (1%)
Query: 1 MPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQ--KTAR 58
+PYP N E A +E VR+ GAVPAT+ I+ G+P VG+ + R A K +R
Sbjct: 40 LPYPHNLELALAMEQEVRDQGAVPATVGIVAGVPTVGMDAAAIRRFAHPDPHHPPLKVSR 99
Query: 59 RDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRT 118
RDI +VVA G+GATTV+ATM A + G+ VF TGGIGGVHR T D+S+DLTEL RT
Sbjct: 100 RDIGYVVAAGGDGATTVAATMALAHLAGVQVFATGGIGGVHRGARETWDVSADLTELERT 159
Query: 119 PVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCA 178
PV VV AG K+ILD+P TLEYLET GV V ++T EFPAF++ +SG V D+ A
Sbjct: 160 PVLVVCAGAKAILDLPATLEYLETGGVPVLGWRTAEFPAFYSVSSGLPVAYAQDA-SFVA 218
Query: 179 RLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLAR 238
R + L G+G+V+ VP P E A V+E+AI+ AL A ++ + G A TPFLLA
Sbjct: 219 RAWKAHRALG-GAGMVLAVPPPVEDAIDRAVVEAAIERALNRAVKEGVHGPAVTPFLLAA 277
Query: 239 VNELTGGLSLASNIALVKNNALIGAKISVALA 270
+ T G S+ +N+AL++ NA I A+++ A+A
Sbjct: 278 LARETEGESVRANVALLRQNARIAAQVATAIA 309
>sp|A7HMA1|PSUG_FERNB Pseudouridine-5'-phosphate glycosidase OS=Fervidobacterium nodosum
(strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=psuG PE=3
SV=1
Length = 296
Score = 232 bits (591), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 122/272 (44%), Positives = 171/272 (62%), Gaps = 5/272 (1%)
Query: 1 MPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRD 60
+PYP N ETAK +E + NG VPATI IL+G VG+S E++ + L + K R+
Sbjct: 29 LPYPHNVETAKMLEEMALENGVVPATIGILKGEIIVGMSQEQINEM--LADEPLKIGTRE 86
Query: 61 IAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPV 120
I + V + + ATTVSATM A + GI VF TGGIGGVH D+S D+TE+ ++ V
Sbjct: 87 IPYAVGMKKSAATTVSATMRIAKIAGIDVFATGGIGGVHIG---DWDVSQDITEMAKSDV 143
Query: 121 AVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARL 180
VVSAG KSILD+ +T+E+LET V V YKTN+FP F+ S + RVDSPED A++
Sbjct: 144 IVVSAGCKSILDVKKTIEFLETFQVTVVGYKTNKFPIFYEGLSDFNLEHRVDSPEDIAKI 203
Query: 181 IDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLARVN 240
L + L++ PIP+E S + ++ ++ AL E EK ITG A TP+LL+R+
Sbjct: 204 FRAKKSLGIEGALLVANPIPQEFVISEQEVDGYMKQALSECFEKGITGKAVTPYLLSRIA 263
Query: 241 ELTGGLSLASNIALVKNNALIGAKISVALAQL 272
+L+ G +L SNI L+KNN L+ +I+ +L +
Sbjct: 264 QLSNGKTLTSNIELLKNNVLLACQIAKSLKTM 295
>sp|A1B316|PSUG_PARDP Pseudouridine-5'-phosphate glycosidase OS=Paracoccus denitrificans
(strain Pd 1222) GN=psuG PE=3 SV=1
Length = 304
Score = 229 bits (585), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 128/259 (49%), Positives = 162/259 (62%), Gaps = 1/259 (0%)
Query: 1 MPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKL-GSKAQKTARR 59
MPYPQN E A++VEA VR GAVPATIA++ G VGL E LE LA + K +R
Sbjct: 33 MPYPQNLEVAQQVEAAVREEGAVPATIAVMGGRIRVGLDAEALEALASTPAEQVMKLSRA 92
Query: 60 DIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTP 119
D+A +A GATTV+ATM A + GI VF TGGIGGVHR E + DIS+DL EL ++P
Sbjct: 93 DLAACLALGRTGATTVAATMICAHLAGIEVFATGGIGGVHRGAETSFDISADLQELAQSP 152
Query: 120 VAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCAR 179
V VV+AG K+ILD+P+TLE LET GV V A+ ++ PAF++ SG P R+D P A
Sbjct: 153 VTVVAAGAKAILDLPKTLEVLETLGVPVIAFGQDQLPAFWSRESGLAAPLRMDDPAQIAA 212
Query: 180 LIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLARV 239
+ +L L G ++ PIP E + ++ AL EA + I A TPFLL R+
Sbjct: 213 SARLRRELGLSGGQLVVNPIPPEAEIPRAEMIPVVEQALSEAEAQGIAAKAVTPFLLQRI 272
Query: 240 NELTGGLSLASNIALVKNN 258
ELT G SL +NIALV NN
Sbjct: 273 FELTQGRSLDANIALVLNN 291
>sp|Q165S4|PSUG_ROSDO Pseudouridine-5'-phosphate glycosidase OS=Roseobacter denitrificans
(strain ATCC 33942 / OCh 114) GN=psuG PE=3 SV=1
Length = 310
Score = 229 bits (584), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 128/269 (47%), Positives = 166/269 (61%), Gaps = 1/269 (0%)
Query: 1 MPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRD 60
MPYPQN E A++VE +R G PATIA+++G +GL +LE LA+ A K +R D
Sbjct: 34 MPYPQNLEVARQVEDDLRAAGVTPATIAVMDGTLHIGLEAHQLEALAQAKGVA-KLSRAD 92
Query: 61 IAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPV 120
IA +AT G GATTVSATM A + GI VF TGGIGGVHR E + D+S+DL EL +TPV
Sbjct: 93 IAACMATGGTGATTVSATMIAAHLAGISVFATGGIGGVHRGAESSFDVSADLLELAQTPV 152
Query: 121 AVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARL 180
VV+AG K+ILD+ +TLE LET GV V + FPAF++ S K P R+D P A
Sbjct: 153 TVVAAGAKAILDVAKTLEVLETQGVPVITVGQDSFPAFWSAESVFKSPLRMDDPVGIAAA 212
Query: 181 IDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLARVN 240
+ + L L G ++ PIP + I +A +A + I G A TP+LL R+
Sbjct: 213 HQMRVDLGLPGGQLVANPIPHTDEIPATELAPIIATAQADAEKHGIKGKAVTPYLLQRIY 272
Query: 241 ELTGGLSLASNIALVKNNALIGAKISVAL 269
ELT G SL +NIALV+NNA + I+ AL
Sbjct: 273 ELTQGRSLTANIALVRNNARLAGAIAQAL 301
>sp|B9LGZ1|PSUG_CHLSY Pseudouridine-5'-phosphate glycosidase OS=Chloroflexus aurantiacus
(strain ATCC 29364 / DSM 637 / Y-400-fl) GN=psuG PE=3
SV=1
Length = 305
Score = 229 bits (583), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 133/275 (48%), Positives = 178/275 (64%), Gaps = 3/275 (1%)
Query: 1 MPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRD 60
+PYP N A+ +EA VR GAVPATI ++EG+P +GL+ ELERLA G + +K +RRD
Sbjct: 30 LPYPHNLAVAEGLEAEVRAAGAVPATIGLIEGVPVIGLNGNELERLAVGGDRVRKLSRRD 89
Query: 61 IAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPV 120
I + +GATTV+ATM A+ GI VF TGGIGGVHR H+ D+S+DLTELGRTPV
Sbjct: 90 IGAAIVDHADGATTVAATMALAAAAGIEVFATGGIGGVHRGATHSWDVSADLTELGRTPV 149
Query: 121 AVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARL 180
VV AG K+ILD+P TLEYLET GV V Y+T EFPAF+T SG V AR+
Sbjct: 150 LVVCAGAKAILDLPATLEYLETQGVPVVGYQTVEFPAFYTPHSGLTVAAVAADALAAARM 209
Query: 181 IDVNMKLKLGS---GLVIGVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLA 237
+ + + G+++ VP P HA +E+AI AL A + + G A TPFLLA
Sbjct: 210 WRIQRRYHTFAAPGGMLLCVPPPERHALEREAVEAAIGRALARAEAEGVRGPAVTPFLLA 269
Query: 238 RVNELTGGLSLASNIALVKNNALIGAKISVALAQL 272
+ E T G S+ +NIAL++NN + A+++V +++L
Sbjct: 270 AMAEETSGESIETNIALLRNNTRVAAEVAVRISEL 304
>sp|C5CDZ1|PSUG_KOSOT Pseudouridine-5'-phosphate glycosidase OS=Kosmotoga olearia (strain
TBF 19.5.1) GN=psuG PE=3 SV=1
Length = 289
Score = 225 bits (574), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 121/271 (44%), Positives = 171/271 (63%), Gaps = 3/271 (1%)
Query: 1 MPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRD 60
+P+P NFETA +E V+ GA+P T+ I+ G +GL+ +E+E LAK K +
Sbjct: 18 LPWPTNFETAVSMENKVKEKGAIPKTLGIINGEIKIGLTEKEIEHLAK-AKNVMKIGTAE 76
Query: 61 IAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPV 120
IA +A R N ATTVSATM A GI VF TGGIGGVHR+ D+S D+ EL +T +
Sbjct: 77 IAAAIALRRNAATTVSATMRLAKNAGIDVFATGGIGGVHRN--VPWDVSQDIMELSKTRM 134
Query: 121 AVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARL 180
VV AG KSILD+ RT+E+LET V V Y+T+ P F T+ S KV R DSPE+ +
Sbjct: 135 IVVCAGFKSILDVERTIEFLETFQVTVVGYQTDYMPLFHTKESEYKVNIRADSPEEIVAI 194
Query: 181 IDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLARVN 240
+ KL + +++ PIP + +E I+ A+ +A+E I+G + TPFLL+R+
Sbjct: 195 FNEKEKLGIEGAILVANPIPEQSEIPREELEEYIKKAVAQAKENGISGKSLTPFLLSRLT 254
Query: 241 ELTGGLSLASNIALVKNNALIGAKISVALAQ 271
EL+GG +L +NIAL+KNNA + +I+VAL++
Sbjct: 255 ELSGGKTLTANIALLKNNASLAGEIAVALSR 285
>sp|Q7N4X5|PSUG1_PHOLL Pseudouridine-5'-phosphate glycosidase 1 OS=Photorhabdus
luminescens subsp. laumondii (strain TT01) GN=psuG1 PE=3
SV=1
Length = 318
Score = 223 bits (568), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 121/268 (45%), Positives = 174/268 (64%), Gaps = 1/268 (0%)
Query: 1 MPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRD 60
+ YP N TAK VE VR +GA+PATI I +G +G+S E++E+ A S K RD
Sbjct: 37 LDYPDNVTTAKNVEQAVRESGAIPATIGIDKGEFLIGMSDEQIEKFAT-ASHVPKVTSRD 95
Query: 61 IAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPV 120
I V+A+ G GATTV++++ A + GI F + GIGGVHR E +MDIS+DLT+L R+ V
Sbjct: 96 IPVVLASGGMGATTVASSILAAEIAGIKFFCSAGIGGVHRGAETSMDISADLTQLTRSRV 155
Query: 121 AVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARL 180
AVV AG K+ILDI TLE+LET V V +Y++++FPAF+ +SG K P R+D A+
Sbjct: 156 AVVCAGAKNILDIGLTLEFLETWNVPVISYQSDDFPAFYCRSSGFKSPQRLDELAVIAKA 215
Query: 181 IDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLARVN 240
I++N L G G++I P E A + I+ IQ A+ EA++KNI GN+ T +L+ V+
Sbjct: 216 IEINWMLPGGKGVLITTPTKPEDALDNQKIDIIIQEAVLEAKKKNIVGNSLTKYLMRMVD 275
Query: 241 ELTGGLSLASNIALVKNNALIGAKISVA 268
T G+S +N+A++ N A + K++VA
Sbjct: 276 RETDGISAKANMAVLVNTAEVAGKLAVA 303
>sp|B7ID34|PSUG_THEAB Pseudouridine-5'-phosphate glycosidase OS=Thermosipho africanus
(strain TCF52B) GN=psuG PE=3 SV=1
Length = 293
Score = 222 bits (565), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 121/271 (44%), Positives = 170/271 (62%), Gaps = 6/271 (2%)
Query: 1 MPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRD 60
+PYP+N + A+E E IV NG VPATI IL+G VGLS E+L L + K R+
Sbjct: 29 LPYPENLKVAQEFEDIVYENGCVPATIGILKGKVIVGLSKEQLIEL--VDDNPIKVGTRE 86
Query: 61 IAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPV 120
I++ +A + + ATTVS+T AS+ GI VF TGGIGGVHR GE D+S D+ EL +T +
Sbjct: 87 ISYAIAMKKSAATTVSSTAKIASLAGIKVFATGGIGGVHR-GE--WDVSQDIIELSKTNI 143
Query: 121 AVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARL 180
VVSAG KSILDI +TLE+LET V YKT FP F+ S K+ +V++ ++ A +
Sbjct: 144 IVVSAGCKSILDIKKTLEFLETFQVLTVGYKTEYFPIFYNRLSKEKI-YKVENADEIANI 202
Query: 181 IDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLARVN 240
+ KLKL S +++ PIP ++ IE I++ +E EK+I G TP++L R+
Sbjct: 203 FNEKNKLKLESAILVANPIPEDYVLDNNEIEGYIKTIEKEIAEKDIHGKEVTPYMLKRLV 262
Query: 241 ELTGGLSLASNIALVKNNALIGAKISVALAQ 271
EL+ G +L SNI L+KNN + KI+ +L +
Sbjct: 263 ELSNGKTLESNIVLLKNNVELACKIAQSLKK 293
>sp|A9B4S4|PSUG_HERA2 Pseudouridine-5'-phosphate glycosidase OS=Herpetosiphon aurantiacus
(strain ATCC 23779 / DSM 785) GN=psuG PE=3 SV=1
Length = 303
Score = 221 bits (563), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 124/255 (48%), Positives = 162/255 (63%), Gaps = 1/255 (0%)
Query: 1 MPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRD 60
+PYP N E A ++EA VR GAVPATIA+++G VGL+ E++E A + K +RRD
Sbjct: 32 LPYPHNREIALQLEATVRAGGAVPATIAVIQGQVHVGLTNEQIEHFAT-ATDVLKLSRRD 90
Query: 61 IAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPV 120
I + VA +GATTV+ATM A + GI VF TGGIGGVHR T D+S+DL ELG++ V
Sbjct: 91 IGYAVAAGRDGATTVAATMAIAELAGIQVFATGGIGGVHRGARDTWDVSADLGELGKSSV 150
Query: 121 AVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARL 180
VV AG KSILD+P TLE LET+GV V Y T E PAF++ SG ++ RVD P A
Sbjct: 151 LVVCAGAKSILDLPATLEVLETYGVPVVGYTTEELPAFYSAHSGLQLGRRVDDPTQAAAA 210
Query: 181 IDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLARVN 240
+ GSG+V+ VP P E A + +E+AI A+ +A I G A TPFLL+ +
Sbjct: 211 WAAHRLYGGGSGMVLAVPPPVEKALDPQFVEAAIGRAIAQAEAAGIRGAAVTPFLLSAMA 270
Query: 241 ELTGGLSLASNIALV 255
T G S+A+N AL+
Sbjct: 271 RETEGESIATNTALL 285
>sp|A8GCG3|PSUG_SERP5 Pseudouridine-5'-phosphate glycosidase OS=Serratia proteamaculans
(strain 568) GN=psuG PE=3 SV=1
Length = 308
Score = 217 bits (552), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 119/271 (43%), Positives = 169/271 (62%), Gaps = 1/271 (0%)
Query: 3 YPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIA 62
YP N ETA VEA VR +GAVPATI I +G VG+ E++ER A A K + ++
Sbjct: 39 YPANVETALAVEAAVRRSGAVPATIGICDGEILVGMHREQIERFATTPGIA-KVSSNNLP 97
Query: 63 HVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAV 122
V+A + GATTV++++ A + GI F + GIGGVHR GE +MDISSDL + RT V V
Sbjct: 98 FVLAQKSMGATTVASSLMLAELAGIGFFASAGIGGVHRGGEDSMDISSDLIQFTRTNVTV 157
Query: 123 VSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLID 182
V AG K+ILDI RTLE+LET V V Y+T++FPAF+ +SG + P R+DS E A+ ID
Sbjct: 158 VCAGAKNILDIGRTLEFLETQCVPVVTYQTDDFPAFYCRSSGYRSPQRLDSLEAIAQAID 217
Query: 183 VNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLARVNEL 242
+N L + +V+ P E A R +++AIQ+A+ A K +TG+ T F++ V +
Sbjct: 218 INRALPGSAAMVVAAPTKPEDAIDSRDVQAAIQAAIENAAAKGVTGSQVTKFIMKAVEQA 277
Query: 243 TGGLSLASNIALVKNNALIGAKISVALAQLR 273
T G S +N A++ N A I ++++ + R
Sbjct: 278 THGRSAMANAAVLVNTAEIAGQLAMVYHRPR 308
>sp|B8II14|PSUG_METNO Pseudouridine-5'-phosphate glycosidase OS=Methylobacterium nodulans
(strain ORS2060 / LMG 21967) GN=psuG PE=3 SV=1
Length = 337
Score = 216 bits (550), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 136/258 (52%), Positives = 174/258 (67%), Gaps = 1/258 (0%)
Query: 1 MPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRD 60
MP+PQN ETA+ V A+VR NGAVPA +A++ G +GL E L+ L + K +R D
Sbjct: 34 MPHPQNVETARAVAAVVRANGAVPAIVAVVAGRIRIGLPEEILDWLGT-AKEVLKLSRAD 92
Query: 61 IAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPV 120
+ H VA +G+TTV+ATM A GI VF TGGIGGVHR E T+DIS+DL EL RTPV
Sbjct: 93 LPHAVAAGLHGSTTVAATMICAHRAGIRVFATGGIGGVHRGVEETLDISADLDELARTPV 152
Query: 121 AVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARL 180
AVV AG K+ILD+PRTLEYLET GV V Y+T+ FPAF++ SG P R+D+PE A L
Sbjct: 153 AVVCAGAKAILDLPRTLEYLETRGVPVVGYRTDRFPAFWSRDSGLPAPLRLDTPEAIAAL 212
Query: 181 IDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLARVN 240
+ L LG G+++ P+P R I + I +A+ +AR I G A TPFLL+R+
Sbjct: 213 MRTKEALDLGGGILVANPVPEADEIPAREIAALIATAVAQARAAGIAGKAVTPFLLSRLL 272
Query: 241 ELTGGLSLASNIALVKNN 258
+LTGG SL++NIALVKNN
Sbjct: 273 DLTGGRSLSTNIALVKNN 290
>sp|Q1D739|PSUG_MYXXD Pseudouridine-5'-phosphate glycosidase OS=Myxococcus xanthus
(strain DK 1622) GN=psuG PE=3 SV=1
Length = 303
Score = 213 bits (541), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 118/271 (43%), Positives = 159/271 (58%)
Query: 1 MPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRD 60
+PYP N A+ E +R GAVPA AI++G CVGL E+ RLA+ + K A RD
Sbjct: 31 LPYPDNLAAARACEEAIRRAGAVPAATAIIDGQLCVGLEEPEMRRLAEGKERLLKVASRD 90
Query: 61 IAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPV 120
A +ATR G TTVSAT A+ GI VF TGGIGGVHR DIS D+ L R PV
Sbjct: 91 FAVAMATRATGGTTVSATCEMAAAAGIRVFSTGGIGGVHRGASEHFDISQDIAALARFPV 150
Query: 121 AVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARL 180
AVV AG KS+LD+P+T+E LET GV V T+E P+F++ SG + R D + AR+
Sbjct: 151 AVVCAGAKSVLDLPKTMELLETAGVPVIGVGTDELPSFYSRGSGIPLEHRADDVDTAARI 210
Query: 181 IDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLARVN 240
+ G++ VP P E + +E I + L +A + I G A TPFLL+ +
Sbjct: 211 ARARFESLKQGGVLYTVPPPEETSLPRNEVELHIAATLADADRQGIRGKAVTPFLLSEMA 270
Query: 241 ELTGGLSLASNIALVKNNALIGAKISVALAQ 271
+ TGG +L +N+AL+ NNA +++VA A+
Sbjct: 271 KRTGGKTLKANLALLTNNARFAGQLAVAYAR 301
>sp|C6CFY1|PSUG_DICZE Pseudouridine-5'-phosphate glycosidase OS=Dickeya zeae (strain
Ech1591) GN=psuG PE=3 SV=1
Length = 316
Score = 206 bits (523), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 111/278 (39%), Positives = 169/278 (60%), Gaps = 1/278 (0%)
Query: 1 MPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRD 60
+PYP N TA+++EA+VR GA+PATI I G +G+S ++ER + K + RD
Sbjct: 39 LPYPDNVATAQKIEAVVRAEGAIPATIGIENGRFLIGMSDADIERFGAT-NGIPKASSRD 97
Query: 61 IAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPV 120
I ++A G GATTV++++ A + GIP F + GIGGVHR E +MDIS+DL + R+ V
Sbjct: 98 IPVILAQGGKGATTVASSLVAADLAGIPFFASAGIGGVHRGAEKSMDISADLVQFTRSRV 157
Query: 121 AVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARL 180
AVV AG KSILD+ TLEYLET V + +Y++++FPAF+ +SG P R+D P AR
Sbjct: 158 AVVCAGAKSILDLGLTLEYLETQCVPIISYQSDDFPAFYCRSSGFPSPHRLDDPAVVARS 217
Query: 181 IDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLARVN 240
I+++ KL S ++I PI A +ES I+ A +A + I G TP+L+ V
Sbjct: 218 IEMHWKLGNRSSVLITHPIHENDAIDKDEVESIIREAALQAEHEGIRGPGATPYLMRAVA 277
Query: 241 ELTGGLSLASNIALVKNNALIGAKISVALAQLRQQESN 278
T G ++ +N++++ + A + K++ A +Q +
Sbjct: 278 RATQGRTVKANMSVLISTAALAGKLACAHTDYLRQHNQ 315
>sp|A4F929|PSUG_SACEN Pseudouridine-5'-phosphate glycosidase OS=Saccharopolyspora
erythraea (strain NRRL 23338) GN=psuG PE=3 SV=1
Length = 303
Score = 204 bits (518), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 113/270 (41%), Positives = 156/270 (57%), Gaps = 1/270 (0%)
Query: 1 MPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRD 60
+P P+N A++ E +R+ G VPATI ++ G P VGL+ E++E LA A K + RD
Sbjct: 34 LPRPRNLAVARDAERQLRDAGVVPATIGVVAGTPTVGLTGEQIEELAA-DEAAVKISTRD 92
Query: 61 IAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPV 120
+ VA +G TTV+AT F A GI VF TGG+GGVH T D S+DL L TP+
Sbjct: 93 LPVAVARGASGGTTVAATAFLARKAGIRVFATGGLGGVHHGAATTFDESADLVTLASTPL 152
Query: 121 AVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARL 180
+VSAG KSILD+ TLE LET + V Y+T FP F+ SG + VD+P++ A L
Sbjct: 153 VLVSAGAKSILDLAATLERLETLNIPVVGYRTRRFPGFYVADSGHDLEHSVDTPQEVAAL 212
Query: 181 IDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLARVN 240
++ L+L S L++ PIP E + + A EA + I+G+ TPFLL +
Sbjct: 213 VEARDALELRSALLVANPIPPERQLDPELHRRVLAEAWEEAERQGISGHDSTPFLLDHIR 272
Query: 241 ELTGGLSLASNIALVKNNALIGAKISVALA 270
TG SL NI + +NN +GA I+ A+A
Sbjct: 273 RATGDRSLEVNIDVYQNNVALGASIARAMA 302
>sp|B1W0X1|PSUG_STRGG Pseudouridine-5'-phosphate glycosidase OS=Streptomyces griseus
subsp. griseus (strain JCM 4626 / NBRC 13350) GN=psuG
PE=3 SV=1
Length = 323
Score = 199 bits (506), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/260 (43%), Positives = 155/260 (59%), Gaps = 4/260 (1%)
Query: 1 MPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKA-QKTARR 59
+P P+N A+E+E +VR+ GAVPAT+A+L+G +GL ++LER+A G A +K R
Sbjct: 51 LPRPRNLSVARELEGLVRSAGAVPATVAVLDGRARIGLDGDQLERVA--GDPAVRKLGHR 108
Query: 60 DIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTP 119
D+A +A +GATTVSAT F A+ GI VF TGG+GGVHR D S+DL L RT
Sbjct: 109 DLAPALAAGADGATTVSATAFLAARAGIGVFATGGLGGVHREWAENQDESADLRLLARTG 168
Query: 120 VAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCAR 179
+ VV AG+KSILD+P TL+ LET GV V Y T FP F+ +SG V V SPE+ A
Sbjct: 169 ITVVCAGVKSILDVPATLQRLETLGVPVVGYGTGHFPGFYLSSSGEPVDWTVHSPEEVAE 228
Query: 180 LIDVNMKLKLGSG-LVIGVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLAR 238
+I L G L++ P+ + + + AL RE+ I+G TPFLL +
Sbjct: 229 VIRAREALGGPVGALIVANPVAERDQLDPVLHDRVLAQALDACRERGISGQGVTPFLLDQ 288
Query: 239 VNELTGGLSLASNIALVKNN 258
+ T G SL +N+A V+ N
Sbjct: 289 LTRRTEGASLEANLAAVRGN 308
>sp|Q0RBB8|PSUG_FRAAA Pseudouridine-5'-phosphate glycosidase OS=Frankia alni (strain
ACN14a) GN=psuG PE=3 SV=1
Length = 361
Score = 190 bits (482), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 110/278 (39%), Positives = 157/278 (56%), Gaps = 1/278 (0%)
Query: 1 MPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRD 60
+P P+N + A E+E + R G PATIA+++G+P VGL +L R+A + K + RD
Sbjct: 35 LPRPRNRDVAVELEELARARGVTPATIAVIDGVPRVGLDEPDLRRIAD-DANVIKLSVRD 93
Query: 61 IAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPV 120
+ AT GATTV++T A+ VGI +F TGG+GGVHR + D S+DL L P+
Sbjct: 94 LPVACATGWTGATTVASTALLAARVGIRLFATGGLGGVHRGAGDSFDESADLVTLAAMPI 153
Query: 121 AVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARL 180
VVSAG+KSILDI TLE LET G+ V Y+T+ FP F+ + + RV A
Sbjct: 154 TVVSAGVKSILDIGATLERLETLGITVVGYRTSTFPGFYLPHTTYDLDWRVGDAGQVAAT 213
Query: 181 IDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLARVN 240
+ L L S +V+ P+P + A + + + AL A E+ I G A TPFLL +
Sbjct: 214 MAAADLLGLTSAIVVANPLPTDQALDPALHDRVLADALAWATERGIRGKAVTPFLLETFH 273
Query: 241 ELTGGLSLASNIALVKNNALIGAKISVALAQLRQQESN 278
TGG SL NI V+NN + + I++A A + ++
Sbjct: 274 RETGGASLEVNINAVRNNVAVASDIALAWAAKDRSPTD 311
>sp|C1AA54|PSUG_GEMAT Pseudouridine-5'-phosphate glycosidase OS=Gemmatimonas aurantiaca
(strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505)
GN=psuG PE=3 SV=1
Length = 306
Score = 182 bits (462), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/268 (41%), Positives = 163/268 (60%), Gaps = 3/268 (1%)
Query: 4 PQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAH 63
P N E A+ + V GA+P AI G P +GL E+LER + +K + RD+
Sbjct: 39 PYNREAARRMTEAVTAVGAIPVITAISRGTPTLGLDDEDLERFLQR-DGVRKVSARDLGI 97
Query: 64 VVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVV 123
+A +GATTV+AT+ ++ G+ VF TGGIGGVHR + D S+DL EL RTPV VV
Sbjct: 98 AMADGADGATTVAATLALCALGGLEVFATGGIGGVHR--DAPFDESADLIELSRTPVIVV 155
Query: 124 SAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDV 183
AG KSILD+P TLE LET GV V T+E P FF+ ++G ++ R+D PE AR
Sbjct: 156 CAGAKSILDLPATLERLETLGVPVVGCGTDELPGFFSLSTGLRLTSRLDRPEQIARAWRA 215
Query: 184 NMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLARVNELT 243
+ L S +++ P P + A ++++A ++AL+ A I G A TP+LLA++ + T
Sbjct: 216 HRALGRESAMLVVQPPPADVAIPADIVDAATRAALQAASLAGIRGAAVTPYLLAQIQQRT 275
Query: 244 GGLSLASNIALVKNNALIGAKISVALAQ 271
G S+++N+AL++ NA + +I+VAL +
Sbjct: 276 EGRSVSANLALLEANARLAGQIAVALVE 303
>sp|Q72JF9|PSUG_THET2 Pseudouridine-5'-phosphate glycosidase OS=Thermus thermophilus
(strain HB27 / ATCC BAA-163 / DSM 7039) GN=psuG PE=3
SV=1
Length = 281
Score = 175 bits (443), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 109/258 (42%), Positives = 149/258 (57%), Gaps = 8/258 (3%)
Query: 1 MPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRD 60
+PYP N E A +E VR GA P TIA++ G VGLS EE+E LA G A+K + +
Sbjct: 17 LPYPLNLEVALALEEAVREEGATPKTIALVRGEVRVGLSPEEMEALAAGG--AEKASLWN 74
Query: 61 IAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPV 120
+A ++A + TTV+AT+ A + GIPVF TGGIGGVH D S+DL L RTP+
Sbjct: 75 LAALLAQGRSAGTTVAATVHLAHLHGIPVFATGGIGGVH---PEPYDESADLVALSRTPI 131
Query: 121 AVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARL 180
VVS+G K+ILD+ TLE LET GV V Y+T+ PAFF+ S VP RVD+P + AR+
Sbjct: 132 LVVSSGPKAILDLRATLERLETLGVSVVGYRTDRLPAFFSPDSPFPVPARVDTPMEAARV 191
Query: 181 IDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLARVN 240
L LG L++ P + ++ A R A + + G A TP+LL +++
Sbjct: 192 YLRARALGLGGVLLVN---PVSQGLPYEQVALWVEEAGRMAAREGVFGKALTPYLLRKLS 248
Query: 241 ELTGGLSLASNIALVKNN 258
EL+ G + N L+ N
Sbjct: 249 ELSSGETDRVNRRLLLEN 266
>sp|A4X4Y7|PSUG_SALTO Pseudouridine-5'-phosphate glycosidase OS=Salinispora tropica
(strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=psuG PE=3
SV=1
Length = 324
Score = 174 bits (440), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 118/260 (45%), Positives = 151/260 (58%), Gaps = 2/260 (0%)
Query: 1 MPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRD 60
+P P N A+E+E VR+ GAVPATI ++ G VGL EL RLA + A K + RD
Sbjct: 51 LPRPDNLRVAREIEQTVRDAGAVPATIGMVAGQLVVGLDDAELTRLATVDDVA-KLSVRD 109
Query: 61 IAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPV 120
+A AT +GATTV+AT A+ GI VF TGG+GGVHR + D S+DLT L RTP+
Sbjct: 110 LAVAAATDADGATTVAATSAVAAAAGIRVFATGGLGGVHREAAQSFDESADLTTLARTPI 169
Query: 121 AVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARL 180
AVV AG+KSILD TLE LET GV V Y+T FP F+ G + VDSPE A
Sbjct: 170 AVVCAGVKSILDSGATLERLETLGVGVVGYRTRRFPGFYLTDGGFDLDWSVDSPEQVAAA 229
Query: 181 IDVNMKLKLGS-GLVIGVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLARV 239
+ + L S GLV+ P+P + + + + L R + +TG A TPFLLA
Sbjct: 230 LAAQEQHGLHSGGLVVANPLPTDEQLDPALHDRTLAEGLMLLRREGVTGKAVTPFLLAHF 289
Query: 240 NELTGGLSLASNIALVKNNA 259
+ T G SLA NI ++ NA
Sbjct: 290 HSATEGASLAVNIRIILRNA 309
>sp|A8F8N4|PSUG_THELT Pseudouridine-5'-phosphate glycosidase OS=Thermotoga lettingae
(strain ATCC BAA-301 / DSM 14385 / TMO) GN=psuG PE=3
SV=1
Length = 284
Score = 172 bits (437), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/273 (38%), Positives = 153/273 (56%), Gaps = 4/273 (1%)
Query: 1 MPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRD 60
+P+P N +TA E+E + G TI I+ G VGLS EE+ ++A K +
Sbjct: 16 LPFPINIDTAVELEELAAETGCSAKTIGIIAGQIKVGLSREEIVQIAS-RKDVLKIGTAE 74
Query: 61 IAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPV 120
I +A + ATTVSATM A + I VF TGGIGGVH+ + D+S DL EL RT +
Sbjct: 75 IPFALAKKMWAATTVSATMRIAHLNNIKVFATGGIGGVHKIDQ--WDVSQDLAELSRTRM 132
Query: 121 AVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARL 180
VVSAG KSILD+ T+E LET + V YKT+E PAF+ +++ + RVDS E+ A +
Sbjct: 133 IVVSAGPKSILDLRSTVEMLETFQITVVGYKTDELPAFYCKSTSIHIN-RVDSFEEIASI 191
Query: 181 IDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLARVN 240
K L +++ PIP EHA E + + + ++ G TPFLL+R+
Sbjct: 192 FLFKEKFNLPGAVLVFNPIPDEHAIEVEQFEEWYRLSEHDLDASSVKGKGVTPFLLSRLA 251
Query: 241 ELTGGLSLASNIALVKNNALIGAKISVALAQLR 273
+ G ++ SN+ L+KNN + +I L++++
Sbjct: 252 HYSKGKTVRSNVELLKNNVKVACEILNQLSKMQ 284
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.132 0.368
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,437,322
Number of Sequences: 539616
Number of extensions: 4014871
Number of successful extensions: 12497
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 12354
Number of HSP's gapped (non-prelim): 78
length of query: 278
length of database: 191,569,459
effective HSP length: 116
effective length of query: 162
effective length of database: 128,974,003
effective search space: 20893788486
effective search space used: 20893788486
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)