Query 023717
Match_columns 278
No_of_seqs 124 out of 476
Neff 4.2
Searched_HMMs 29240
Date Mon Mar 25 11:36:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023717.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023717hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gim_A Pseudouridine-5'-phosph 100.0 1E-126 5E-131 894.4 26.6 273 1-273 62-334 (335)
2 4ex8_A ALNA; alpha/beta/alpha- 100.0 2E-121 7E-126 854.4 26.0 269 5-275 47-315 (316)
3 1vkm_A Conserved hypothetical 100.0 2E-120 6E-125 842.1 21.1 260 1-271 37-296 (297)
4 3h5q_A PYNP, pyrimidine-nucleo 87.4 1.7 5.7E-05 42.4 8.2 204 37-262 52-282 (436)
5 1vqu_A Anthranilate phosphorib 85.1 1.4 4.8E-05 41.8 6.3 107 37-159 73-195 (374)
6 2dsj_A Pyrimidine-nucleoside ( 84.9 8 0.00027 37.5 11.6 212 37-264 49-280 (423)
7 2qjg_A Putative aldolase MJ040 84.1 3.3 0.00011 36.0 7.8 81 2-96 126-212 (273)
8 1khd_A Anthranilate phosphorib 81.3 1 3.5E-05 42.2 3.6 144 37-196 59-231 (345)
9 1mzh_A Deoxyribose-phosphate a 78.3 7.9 0.00027 33.5 8.1 16 133-149 187-202 (225)
10 2w6r_A Imidazole glycerol phos 78.2 1.9 6.4E-05 37.3 4.1 68 73-151 187-257 (266)
11 2tpt_A Thymidine phosphorylase 77.6 2.1 7.3E-05 41.6 4.7 146 37-201 50-207 (440)
12 3eoo_A Methylisocitrate lyase; 76.1 21 0.00072 32.8 10.7 158 77-244 33-207 (298)
13 1ka9_F Imidazole glycerol phos 75.3 2.1 7.3E-05 36.5 3.6 63 74-147 184-249 (252)
14 2elc_A Trp D, anthranilate pho 75.2 1.8 6.2E-05 40.2 3.3 107 37-159 46-158 (329)
15 3nvt_A 3-deoxy-D-arabino-heptu 72.8 65 0.0022 30.5 14.4 103 112-217 242-374 (385)
16 1brw_A PYNP, protein (pyrimidi 72.3 4.6 0.00016 39.1 5.5 108 37-159 49-162 (433)
17 1uou_A Thymidine phosphorylase 71.1 3.7 0.00013 40.3 4.6 106 37-158 76-189 (474)
18 4hkm_A Anthranilate phosphorib 71.0 2.4 8.1E-05 39.5 3.0 107 37-159 52-165 (346)
19 3ih1_A Methylisocitrate lyase; 70.3 34 0.0012 31.6 10.6 158 77-245 40-212 (305)
20 1thf_D HISF protein; thermophI 69.3 2.6 8.8E-05 36.0 2.7 63 75-148 184-249 (253)
21 4a0g_A Adenosylmethionine-8-am 69.3 4.1 0.00014 42.0 4.6 64 86-150 201-265 (831)
22 3rxy_A NIF3 protein; structura 68.7 4 0.00014 37.8 4.0 61 77-150 211-275 (278)
23 3fgn_A Dethiobiotin synthetase 68.5 3.5 0.00012 36.6 3.5 71 85-155 125-196 (251)
24 3r88_A Anthranilate phosphorib 68.0 5.1 0.00017 38.0 4.6 106 37-158 72-185 (377)
25 3vav_A 3-methyl-2-oxobutanoate 66.3 14 0.00048 33.9 7.1 130 54-187 14-182 (275)
26 1h5y_A HISF; histidine biosynt 65.6 8.1 0.00028 32.2 5.0 63 74-147 186-251 (253)
27 3of5_A Dethiobiotin synthetase 63.2 7 0.00024 33.7 4.2 68 85-153 109-177 (228)
28 2hjp_A Phosphonopyruvate hydro 60.1 72 0.0025 29.0 10.6 159 77-244 26-203 (290)
29 3b8i_A PA4872 oxaloacetate dec 58.2 44 0.0015 30.5 8.9 156 77-243 32-203 (287)
30 3ezl_A Acetoacetyl-COA reducta 57.9 49 0.0017 27.5 8.5 104 85-215 12-120 (256)
31 1oy0_A Ketopantoate hydroxymet 56.9 36 0.0012 31.3 8.0 105 76-184 44-185 (281)
32 1r7h_A NRDH-redoxin; thioredox 56.6 20 0.00068 23.9 4.9 25 21-47 49-73 (75)
33 3ijr_A Oxidoreductase, short c 56.2 36 0.0012 29.5 7.7 105 84-215 45-155 (291)
34 3l23_A Sugar phosphate isomera 54.5 39 0.0013 29.5 7.6 92 132-227 60-159 (303)
35 2j6v_A UV endonuclease, UVDE; 51.9 16 0.00055 33.0 4.8 94 130-227 60-157 (301)
36 3tva_A Xylose isomerase domain 51.9 31 0.001 29.3 6.4 110 133-244 53-175 (290)
37 3oid_A Enoyl-[acyl-carrier-pro 51.2 50 0.0017 28.0 7.6 103 86-215 4-111 (258)
38 3edm_A Short chain dehydrogena 50.6 37 0.0013 28.8 6.7 106 83-215 5-116 (259)
39 1zlp_A PSR132, petal death pro 50.2 1.1E+02 0.0036 28.4 10.1 176 58-244 28-225 (318)
40 1vzw_A Phosphoribosyl isomeras 48.9 57 0.0019 27.5 7.6 58 73-141 177-240 (244)
41 1tht_A Thioesterase; 2.10A {Vi 48.8 44 0.0015 29.0 7.0 75 118-195 35-111 (305)
42 4eez_A Alcohol dehydrogenase 1 47.7 27 0.00092 30.8 5.5 138 76-231 178-335 (348)
43 3s2u_A UDP-N-acetylglucosamine 47.6 18 0.0006 32.6 4.3 44 226-272 304-354 (365)
44 3sju_A Keto reductase; short-c 46.3 59 0.002 27.9 7.4 102 86-215 24-130 (279)
45 1vi6_A 30S ribosomal protein S 45.4 18 0.00062 31.9 4.0 75 129-226 45-139 (208)
46 3qp9_A Type I polyketide synth 44.8 32 0.0011 33.3 6.0 104 88-215 253-371 (525)
47 2q2v_A Beta-D-hydroxybutyrate 44.8 71 0.0024 26.7 7.5 100 85-214 3-107 (255)
48 3s55_A Putative short-chain de 44.7 63 0.0021 27.5 7.2 108 83-215 7-128 (281)
49 1xg4_A Probable methylisocitra 44.5 1.4E+02 0.0049 27.1 10.0 157 77-243 28-202 (295)
50 3ucx_A Short chain dehydrogena 44.3 1.1E+02 0.0037 25.9 8.6 104 84-215 9-118 (264)
51 1pii_A N-(5'phosphoribosyl)ant 44.1 1.2E+02 0.0042 29.3 9.9 190 17-241 126-347 (452)
52 3qxc_A Dethiobiotin synthetase 44.0 23 0.00078 31.1 4.4 69 85-155 130-199 (242)
53 3gaf_A 7-alpha-hydroxysteroid 43.9 79 0.0027 26.6 7.7 104 84-215 10-117 (256)
54 3s83_A Ggdef family protein; s 43.3 43 0.0015 28.3 6.0 80 6-93 137-216 (259)
55 1vrd_A Inosine-5'-monophosphat 43.3 73 0.0025 30.2 8.1 87 71-163 285-386 (494)
56 1y0e_A Putative N-acetylmannos 42.9 61 0.0021 26.8 6.7 119 1-140 99-217 (223)
57 3mje_A AMPHB; rossmann fold, o 42.4 17 0.0006 35.2 3.7 59 88-152 241-299 (496)
58 3qc0_A Sugar isomerase; TIM ba 41.8 29 0.00099 28.9 4.5 91 131-227 45-138 (275)
59 3bbn_B Ribosomal protein S2; s 41.3 73 0.0025 28.3 7.3 87 125-227 36-182 (231)
60 1byi_A Dethiobiotin synthase; 41.3 16 0.00053 29.9 2.7 65 86-151 108-173 (224)
61 3v2g_A 3-oxoacyl-[acyl-carrier 41.0 87 0.003 26.8 7.6 105 84-215 29-138 (271)
62 3lyl_A 3-oxoacyl-(acyl-carrier 40.3 1.5E+02 0.0052 24.3 8.8 104 85-215 4-111 (247)
63 3fa4_A 2,3-dimethylmalate lyas 40.2 1E+02 0.0036 28.3 8.4 158 77-244 29-206 (302)
64 4eye_A Probable oxidoreductase 40.0 10 0.00036 33.8 1.6 69 77-148 175-255 (342)
65 2jah_A Clavulanic acid dehydro 39.7 1.1E+02 0.0039 25.4 8.0 104 84-215 5-113 (247)
66 1o17_A Anthranilate PRT, anthr 39.7 8.3 0.00028 36.0 0.9 143 37-196 49-217 (345)
67 1p4c_A L(+)-mandelate dehydrog 39.4 49 0.0017 30.8 6.1 70 78-152 238-308 (380)
68 3aog_A Glutamate dehydrogenase 39.3 2.7E+02 0.0093 26.9 11.8 124 10-169 247-374 (440)
69 4f3h_A Fimxeal, putative uncha 39.2 41 0.0014 28.4 5.2 79 7-93 142-220 (250)
70 2vqe_B 30S ribosomal protein S 39.1 1.7E+02 0.0057 26.4 9.4 85 128-227 39-183 (256)
71 1g99_A Acetate kinase; alpha/b 39.1 21 0.00072 34.5 3.6 60 37-96 258-333 (408)
72 1gox_A (S)-2-hydroxy-acid oxid 38.9 94 0.0032 28.7 7.9 10 143-152 301-310 (370)
73 3qwb_A Probable quinone oxidor 38.1 30 0.001 30.5 4.2 69 77-148 164-245 (334)
74 3vkj_A Isopentenyl-diphosphate 38.0 55 0.0019 30.6 6.2 25 71-95 251-276 (368)
75 3rkr_A Short chain oxidoreduct 37.6 1.2E+02 0.004 25.5 7.8 104 84-215 27-136 (262)
76 3r3s_A Oxidoreductase; structu 37.6 1E+02 0.0034 26.7 7.5 106 84-215 47-158 (294)
77 1jvn_A Glutamine, bifunctional 37.6 31 0.0011 33.8 4.7 68 71-149 481-552 (555)
78 3qlj_A Short chain dehydrogena 37.4 1.1E+02 0.0036 26.8 7.8 108 83-215 24-143 (322)
79 1zem_A Xylitol dehydrogenase; 37.3 96 0.0033 26.1 7.2 104 84-215 5-114 (262)
80 3obe_A Sugar phosphate isomera 37.1 47 0.0016 29.1 5.3 86 132-227 77-165 (305)
81 1h7n_A 5-aminolaevulinic acid 37.1 56 0.0019 31.0 6.1 67 154-224 42-122 (342)
82 3tox_A Short chain dehydrogena 37.0 54 0.0018 28.4 5.7 105 83-215 5-115 (280)
83 2z5l_A Tylkr1, tylactone synth 36.8 1.5E+02 0.0051 28.5 9.2 102 86-215 259-364 (511)
84 1ae1_A Tropinone reductase-I; 36.4 1.5E+02 0.0051 25.1 8.3 104 84-214 19-127 (273)
85 3bch_A 40S ribosomal protein S 36.3 16 0.00056 33.2 2.3 75 129-226 80-175 (253)
86 3eaf_A ABC transporter, substr 36.1 1.1E+02 0.0037 26.8 7.6 121 73-194 86-229 (391)
87 1vcv_A Probable deoxyribose-ph 36.0 1.6E+02 0.0053 25.9 8.5 82 9-96 100-194 (226)
88 2dtx_A Glucose 1-dehydrogenase 35.7 97 0.0033 26.3 7.0 18 83-100 5-22 (264)
89 3u5t_A 3-oxoacyl-[acyl-carrier 35.7 1E+02 0.0036 26.3 7.2 104 85-215 26-134 (267)
90 4avf_A Inosine-5'-monophosphat 35.5 1.5E+02 0.005 28.6 8.9 87 73-164 279-379 (490)
91 3osu_A 3-oxoacyl-[acyl-carrier 35.4 1.2E+02 0.0042 25.1 7.5 103 86-215 4-111 (246)
92 3vtz_A Glucose 1-dehydrogenase 35.0 1.3E+02 0.0045 25.6 7.8 46 169-215 60-110 (269)
93 3cxt_A Dehydrogenase with diff 35.0 1.4E+02 0.0048 25.8 8.0 103 84-214 32-139 (291)
94 2tmg_A Protein (glutamate dehy 34.9 3.1E+02 0.011 26.2 12.4 67 84-169 283-349 (415)
95 1wly_A CAAR, 2-haloacrylate re 34.5 54 0.0019 28.8 5.3 70 78-151 162-244 (333)
96 3rih_A Short chain dehydrogena 34.5 1.5E+02 0.0053 25.7 8.3 104 84-215 39-148 (293)
97 2agk_A 1-(5-phosphoribosyl)-5- 34.4 23 0.00078 31.4 2.8 63 74-144 189-260 (260)
98 1k77_A EC1530, hypothetical pr 34.2 77 0.0026 26.1 6.0 91 132-227 41-139 (260)
99 2zat_A Dehydrogenase/reductase 34.2 1.2E+02 0.0041 25.3 7.3 104 84-215 12-121 (260)
100 3u5c_A 40S ribosomal protein S 34.1 29 0.001 31.5 3.5 75 129-226 46-141 (252)
101 3ijp_A DHPR, dihydrodipicolina 33.8 1E+02 0.0035 28.0 7.2 85 106-219 76-161 (288)
102 1piw_A Hypothetical zinc-type 33.7 1.1E+02 0.0039 27.1 7.4 69 77-147 194-273 (360)
103 3n0w_A ABC branched chain amin 33.6 1.2E+02 0.0039 26.5 7.3 131 68-198 79-232 (379)
104 3kws_A Putative sugar isomeras 33.6 38 0.0013 28.7 4.0 90 132-227 65-161 (287)
105 2ejc_A Pantoate--beta-alanine 33.5 25 0.00086 32.1 3.0 140 83-228 18-216 (280)
106 1wbh_A KHG/KDPG aldolase; lyas 33.4 1.1E+02 0.0038 26.1 7.0 66 12-96 100-166 (214)
107 3tqh_A Quinone oxidoreductase; 33.2 46 0.0016 29.2 4.6 71 77-151 168-245 (321)
108 2vpq_A Acetyl-COA carboxylase; 33.0 99 0.0034 28.3 7.0 48 135-182 89-148 (451)
109 2yw3_A 4-hydroxy-2-oxoglutarat 33.0 1.2E+02 0.0042 25.5 7.2 48 39-96 113-161 (207)
110 3d7l_A LIN1944 protein; APC893 32.8 1.8E+02 0.0062 22.9 8.2 13 88-100 5-17 (202)
111 1nki_A Probable fosfomycin res 32.7 58 0.002 24.0 4.5 46 132-177 73-119 (135)
112 3sx2_A Putative 3-ketoacyl-(ac 32.7 1.5E+02 0.0051 24.9 7.7 104 84-214 11-126 (278)
113 2bma_A Glutamate dehydrogenase 32.6 88 0.003 30.7 6.9 135 10-169 264-402 (470)
114 4ibo_A Gluconate dehydrogenase 32.5 1.6E+02 0.0056 25.0 8.0 104 84-215 24-132 (271)
115 3jv7_A ADH-A; dehydrogenase, n 32.3 88 0.003 27.5 6.4 139 77-231 186-342 (345)
116 3j20_B 30S ribosomal protein S 32.2 47 0.0016 29.0 4.5 75 129-226 41-135 (202)
117 3awd_A GOX2181, putative polyo 32.2 1.7E+02 0.0058 24.0 7.8 104 84-215 11-120 (260)
118 3lye_A Oxaloacetate acetyl hyd 32.1 2E+02 0.0068 26.5 8.8 157 77-244 36-214 (307)
119 3eag_A UDP-N-acetylmuramate:L- 31.9 74 0.0025 28.4 5.9 12 117-128 66-77 (326)
120 2bd0_A Sepiapterin reductase; 31.9 2.1E+02 0.0071 23.3 8.4 23 88-116 4-26 (244)
121 1ulz_A Pyruvate carboxylase N- 31.3 70 0.0024 29.4 5.7 15 207-221 173-187 (451)
122 1ypf_A GMP reductase; GUAC, pu 31.2 1.4E+02 0.0049 26.9 7.7 74 72-152 157-240 (336)
123 3kvo_A Hydroxysteroid dehydrog 31.1 2.3E+02 0.008 25.4 9.1 108 83-215 42-158 (346)
124 3tsc_A Putative oxidoreductase 31.0 1.9E+02 0.0065 24.4 8.1 108 83-215 8-130 (277)
125 4iiu_A 3-oxoacyl-[acyl-carrier 31.0 1.6E+02 0.0053 24.7 7.5 106 83-215 23-133 (267)
126 2zkq_b 40S ribosomal protein S 31.0 21 0.0007 33.2 2.0 75 129-226 47-142 (295)
127 3uog_A Alcohol dehydrogenase; 30.9 48 0.0016 29.7 4.5 69 76-147 203-284 (363)
128 3tfo_A Putative 3-oxoacyl-(acy 30.8 1.6E+02 0.0054 25.2 7.6 102 86-215 4-110 (264)
129 3v46_A Cell division control p 30.7 24 0.00081 30.3 2.2 28 115-142 11-38 (170)
130 4dvj_A Putative zinc-dependent 30.4 97 0.0033 27.8 6.4 72 77-151 187-270 (363)
131 4g81_D Putative hexonate dehyd 30.3 2E+02 0.007 25.1 8.4 106 83-216 6-116 (255)
132 2bfw_A GLGA glycogen synthase; 30.2 1.9E+02 0.0065 22.3 7.8 85 114-222 112-197 (200)
133 4fxs_A Inosine-5'-monophosphat 30.2 2.4E+02 0.0083 27.1 9.5 33 124-160 340-377 (496)
134 3o63_A Probable thiamine-phosp 30.1 1.2E+02 0.0041 26.6 6.8 150 5-186 80-240 (243)
135 2fr1_A Erythromycin synthase, 29.9 37 0.0013 32.4 3.7 60 86-151 226-285 (486)
136 3uve_A Carveol dehydrogenase ( 29.9 2.1E+02 0.0073 24.1 8.3 107 84-215 9-134 (286)
137 3ic4_A Glutaredoxin (GRX-1); s 29.8 73 0.0025 22.2 4.5 26 20-47 65-90 (92)
138 3tjr_A Short chain dehydrogena 29.5 1.7E+02 0.0059 25.3 7.7 104 84-215 29-137 (301)
139 3lop_A Substrate binding perip 29.5 1.3E+02 0.0046 25.8 7.0 127 68-194 79-226 (364)
140 3khj_A Inosine-5-monophosphate 29.4 3E+02 0.01 25.4 9.7 6 152-157 242-247 (361)
141 3ipc_A ABC transporter, substr 29.3 1.2E+02 0.0042 25.8 6.6 125 68-194 75-223 (356)
142 3two_A Mannitol dehydrogenase; 29.2 1.1E+02 0.0038 27.0 6.5 68 76-148 190-263 (348)
143 3uf0_A Short-chain dehydrogena 29.2 2.7E+02 0.0091 23.7 8.8 103 84-215 29-135 (273)
144 1x1t_A D(-)-3-hydroxybutyrate 29.1 1.4E+02 0.0048 24.9 6.8 104 85-215 3-112 (260)
145 3cio_A ETK, tyrosine-protein k 28.9 24 0.00082 31.4 2.0 37 114-150 235-271 (299)
146 1o17_A Anthranilate PRT, anthr 28.9 21 0.00073 33.2 1.8 167 37-220 15-207 (345)
147 3dhn_A NAD-dependent epimerase 28.6 1.9E+02 0.0065 23.0 7.3 13 88-100 6-18 (227)
148 3pk0_A Short-chain dehydrogena 28.5 1.8E+02 0.006 24.5 7.4 104 84-215 8-117 (262)
149 2qip_A Protein of unknown func 28.5 42 0.0014 27.3 3.3 47 103-152 91-141 (165)
150 3zqu_A Probable aromatic acid 28.5 74 0.0025 27.6 5.0 60 116-191 130-194 (209)
151 1yqd_A Sinapyl alcohol dehydro 28.5 1.7E+02 0.006 26.1 7.8 72 77-151 202-282 (366)
152 3ewb_X 2-isopropylmalate synth 28.3 53 0.0018 29.6 4.2 106 116-239 67-184 (293)
153 1h75_A Glutaredoxin-like prote 28.2 54 0.0018 22.2 3.4 26 20-47 48-73 (81)
154 1w5q_A Delta-aminolevulinic ac 28.2 72 0.0025 30.2 5.2 67 154-224 39-118 (337)
155 4id9_A Short-chain dehydrogena 28.1 2E+02 0.0069 24.6 7.8 14 85-98 18-31 (347)
156 4dmm_A 3-oxoacyl-[acyl-carrier 27.8 1.8E+02 0.0061 24.7 7.4 105 84-215 26-135 (269)
157 2obn_A Hypothetical protein; s 27.8 1.3E+02 0.0043 28.3 6.8 63 86-151 225-305 (349)
158 3gaz_A Alcohol dehydrogenase s 27.8 59 0.002 28.9 4.4 67 77-148 166-244 (343)
159 2xzm_B RPS0E; ribosome, transl 27.8 42 0.0014 30.2 3.4 76 129-226 42-138 (241)
160 1cbf_A Cobalt-precorrin-4 tran 27.7 74 0.0025 28.0 5.0 80 108-197 166-247 (285)
161 3ngf_A AP endonuclease, family 27.6 73 0.0025 26.8 4.8 93 132-227 49-146 (269)
162 3k30_A Histamine dehydrogenase 27.6 48 0.0016 32.7 4.1 62 203-271 144-219 (690)
163 3orf_A Dihydropteridine reduct 27.5 2.7E+02 0.0091 23.1 8.5 46 170-215 67-117 (251)
164 3gem_A Short chain dehydrogena 27.4 2.2E+02 0.0074 24.1 7.8 99 84-215 25-127 (260)
165 3iwh_A Rhodanese-like domain p 27.3 46 0.0016 25.1 3.1 95 38-167 4-100 (103)
166 3slk_A Polyketide synthase ext 27.3 39 0.0013 34.5 3.5 62 86-153 530-592 (795)
167 2elc_A Trp D, anthranilate pho 27.3 34 0.0011 31.6 2.8 104 38-147 13-129 (329)
168 3lor_A Thiol-disulfide isomera 27.2 44 0.0015 25.2 3.0 43 111-153 24-73 (160)
169 1npb_A Fosfomycin-resistance p 27.2 67 0.0023 23.8 4.1 46 131-176 75-121 (141)
170 3fxa_A SIS domain protein; str 27.0 43 0.0015 27.3 3.1 59 84-152 69-127 (201)
171 2bib_A CBPE, teichoic acid pho 27.0 55 0.0019 31.2 4.3 59 84-149 218-279 (547)
172 3b0p_A TRNA-dihydrouridine syn 26.8 1.5E+02 0.0052 27.0 7.1 22 6-27 110-131 (350)
173 2e1z_A Propionate kinase; TDCD 26.8 19 0.00064 34.9 1.0 60 37-96 266-341 (415)
174 3r1i_A Short-chain type dehydr 26.8 2.5E+02 0.0085 24.0 8.2 105 83-215 29-138 (276)
175 2z6i_A Trans-2-enoyl-ACP reduc 26.8 1.6E+02 0.0054 26.5 7.1 12 85-96 161-172 (332)
176 1geg_A Acetoin reductase; SDR 26.6 2.5E+02 0.0086 23.3 8.0 100 88-215 4-108 (256)
177 3snr_A Extracellular ligand-bi 26.6 2.2E+02 0.0074 24.0 7.6 127 68-194 75-220 (362)
178 3i09_A Periplasmic branched-ch 26.6 1.9E+02 0.0065 24.9 7.4 129 68-196 77-228 (375)
179 3v8b_A Putative dehydrogenase, 26.5 2.6E+02 0.0088 23.9 8.2 104 84-215 26-135 (283)
180 2h5g_A Delta 1-pyrroline-5-car 26.5 53 0.0018 31.4 4.1 167 2-196 173-369 (463)
181 3ffs_A Inosine-5-monophosphate 26.5 2.3E+02 0.0079 26.8 8.5 50 120-173 247-304 (400)
182 3slk_A Polyketide synthase ext 26.3 24 0.00081 36.1 1.7 77 70-151 355-442 (795)
183 2o0b_A 3-phosphoshikimate 1-ca 26.3 3.8E+02 0.013 25.3 10.0 97 100-202 156-265 (450)
184 3ftp_A 3-oxoacyl-[acyl-carrier 26.2 1.4E+02 0.0049 25.4 6.5 104 84-215 26-134 (270)
185 1mxs_A KDPG aldolase; 2-keto-3 26.1 1.2E+02 0.004 26.3 5.9 15 82-96 161-176 (225)
186 4dxd_A Cell division protein F 26.0 51 0.0017 31.8 3.8 52 89-183 105-156 (396)
187 1rjw_A ADH-HT, alcohol dehydro 26.0 78 0.0027 28.0 4.9 72 77-151 179-261 (339)
188 3a28_C L-2.3-butanediol dehydr 25.9 2.8E+02 0.0097 22.9 8.3 101 88-214 4-109 (258)
189 3s2e_A Zinc-containing alcohol 25.9 54 0.0019 28.9 3.8 72 75-148 179-261 (340)
190 4fn4_A Short chain dehydrogena 25.7 2.1E+02 0.0071 25.0 7.6 104 84-215 5-114 (254)
191 3qiv_A Short-chain dehydrogena 25.7 1.7E+02 0.006 24.0 6.8 103 85-215 8-118 (253)
192 3iz6_A 40S ribosomal protein S 25.6 38 0.0013 31.7 2.8 75 129-226 51-146 (305)
193 2qk4_A Trifunctional purine bi 25.6 77 0.0026 29.2 4.9 14 136-149 104-117 (452)
194 1pv8_A Delta-aminolevulinic ac 25.6 62 0.0021 30.6 4.2 67 154-224 32-111 (330)
195 3pgx_A Carveol dehydrogenase; 25.5 2.2E+02 0.0076 24.0 7.5 108 83-215 12-134 (280)
196 3t7c_A Carveol dehydrogenase; 25.5 2.6E+02 0.0089 24.0 8.1 105 84-215 26-147 (299)
197 3imf_A Short chain dehydrogena 25.4 1.8E+02 0.0062 24.3 6.9 104 84-215 4-112 (257)
198 4e3z_A Putative oxidoreductase 25.3 2.4E+02 0.0081 23.7 7.6 103 86-215 26-134 (272)
199 1s2w_A Phosphoenolpyruvate pho 25.2 3.8E+02 0.013 24.2 10.5 160 77-244 30-207 (295)
200 3mio_A DHBP synthase, 3,4-dihy 25.2 44 0.0015 29.5 3.0 55 95-150 135-195 (206)
201 2ab1_A Hypothetical protein; H 25.0 47 0.0016 26.5 2.9 40 111-150 53-95 (122)
202 3dx5_A Uncharacterized protein 25.0 1.1E+02 0.0037 25.7 5.4 86 132-227 49-138 (286)
203 2yrx_A Phosphoribosylglycinami 24.9 78 0.0027 29.2 4.8 15 135-149 98-112 (451)
204 3ouz_A Biotin carboxylase; str 24.8 1.2E+02 0.0041 27.8 6.1 77 134-222 93-193 (446)
205 2ph1_A Nucleotide-binding prot 24.7 40 0.0014 28.6 2.6 35 120-154 157-191 (262)
206 2qr6_A IMP dehydrogenase/GMP r 24.7 1.3E+02 0.0046 27.5 6.4 26 123-152 282-307 (393)
207 3ogz_A UDP-sugar pyrophosphory 24.6 56 0.0019 33.3 4.0 28 134-161 175-205 (630)
208 2fvt_A Conserved hypothetical 24.5 87 0.003 25.4 4.5 32 118-149 68-99 (135)
209 3ngj_A Deoxyribose-phosphate a 24.3 2.1E+02 0.0072 25.4 7.3 25 71-95 183-209 (239)
210 1gee_A Glucose 1-dehydrogenase 24.2 2.8E+02 0.0095 22.7 7.7 17 84-100 5-21 (261)
211 4fcc_A Glutamate dehydrogenase 24.1 1.4E+02 0.0047 29.2 6.5 135 10-169 247-384 (450)
212 3pb6_X Glutaminyl-peptide cycl 24.1 39 0.0014 31.0 2.6 40 143-182 282-321 (330)
213 3gqv_A Enoyl reductase; medium 24.0 26 0.00091 31.6 1.4 99 84-197 163-262 (371)
214 3td9_A Branched chain amino ac 24.0 3.4E+02 0.012 23.2 8.8 122 73-194 92-234 (366)
215 4dvc_A Thiol:disulfide interch 24.0 36 0.0012 26.5 2.0 28 205-235 127-154 (184)
216 3gvc_A Oxidoreductase, probabl 24.0 2.2E+02 0.0074 24.4 7.3 24 77-100 20-43 (277)
217 1n7k_A Deoxyribose-phosphate a 23.6 1.8E+02 0.0062 25.6 6.7 16 77-92 152-167 (234)
218 3usb_A Inosine-5'-monophosphat 23.5 4E+02 0.014 25.6 9.8 14 125-138 366-379 (511)
219 3hv8_A Protein FIMX; EAL phosp 23.4 47 0.0016 28.3 2.8 78 7-93 152-229 (268)
220 1wjk_A C330018D20RIK protein; 23.4 63 0.0021 23.7 3.2 26 21-48 65-92 (100)
221 3lmz_A Putative sugar isomeras 23.3 1.2E+02 0.0041 25.2 5.3 67 132-227 62-128 (257)
222 2l4c_A Endoplasmic reticulum r 23.2 65 0.0022 25.2 3.4 79 130-216 26-121 (124)
223 3beo_A UDP-N-acetylglucosamine 23.2 52 0.0018 28.2 3.1 32 111-150 275-307 (375)
224 3hcz_A Possible thiol-disulfid 23.0 1.9E+02 0.0064 21.0 5.8 42 112-153 26-73 (148)
225 3nkl_A UDP-D-quinovosamine 4-d 23.0 1.5E+02 0.0051 22.3 5.4 90 117-227 4-94 (141)
226 3pvs_A Replication-associated 22.7 1.7E+02 0.0058 27.6 6.8 55 206-265 166-221 (447)
227 2yfq_A Padgh, NAD-GDH, NAD-spe 22.6 2.7E+02 0.0093 26.6 8.2 66 85-169 291-356 (421)
228 1njg_A DNA polymerase III subu 22.6 2.4E+02 0.0083 21.8 6.7 35 205-245 185-219 (250)
229 3cqj_A L-ribulose-5-phosphate 22.6 65 0.0022 27.4 3.5 91 133-227 68-162 (295)
230 3hn7_A UDP-N-acetylmuramate-L- 22.5 1.2E+02 0.0042 29.1 5.8 22 71-92 28-49 (524)
231 3cf4_G Acetyl-COA decarboxylas 22.5 35 0.0012 27.9 1.7 45 106-150 24-68 (170)
232 3bos_A Putative DNA replicatio 22.5 2.9E+02 0.0098 21.8 7.7 59 192-266 166-224 (242)
233 3un1_A Probable oxidoreductase 22.4 2.6E+02 0.009 23.5 7.4 47 168-215 74-125 (260)
234 3gm5_A Lactoylglutathione lyas 22.4 51 0.0017 25.1 2.6 20 132-151 114-133 (159)
235 3lf2_A Short chain oxidoreduct 22.4 3.1E+02 0.011 22.9 7.8 104 84-215 6-116 (265)
236 3ksu_A 3-oxoacyl-acyl carrier 22.4 46 0.0016 28.3 2.5 27 201-227 159-185 (262)
237 4fo4_A Inosine 5'-monophosphat 22.3 3.6E+02 0.012 25.0 8.9 11 189-199 292-302 (366)
238 3lkb_A Probable branched-chain 22.0 3.5E+02 0.012 23.4 8.2 121 74-194 86-228 (392)
239 3sc4_A Short chain dehydrogena 21.8 3.6E+02 0.012 22.9 8.2 107 84-215 7-122 (285)
240 3svt_A Short-chain type dehydr 21.6 2.1E+02 0.0071 24.2 6.6 104 84-215 9-121 (281)
241 4f0j_A Probable hydrolytic enz 21.6 3.1E+02 0.01 21.8 8.9 39 117-158 45-84 (315)
242 1vcf_A Isopentenyl-diphosphate 21.5 1.7E+02 0.0059 26.2 6.3 31 117-152 256-286 (332)
243 3pxx_A Carveol dehydrogenase; 21.5 3.4E+02 0.012 22.6 7.9 108 84-216 8-127 (287)
244 1ais_A TBP, protein (tata-bind 21.4 33 0.0011 29.4 1.4 26 122-147 65-94 (182)
245 3foj_A Uncharacterized protein 21.4 1.1E+02 0.0037 22.1 4.1 82 38-150 4-86 (100)
246 3eme_A Rhodanese-like domain p 21.2 1.2E+02 0.0039 22.0 4.3 47 108-158 46-93 (103)
247 1xa0_A Putative NADPH dependen 21.2 1.1E+02 0.0036 26.7 4.7 68 77-147 165-243 (328)
248 4imr_A 3-oxoacyl-(acyl-carrier 21.2 2.6E+02 0.009 23.8 7.2 105 83-215 30-138 (275)
249 2nm0_A Probable 3-oxacyl-(acyl 21.1 2.6E+02 0.0088 23.5 7.0 18 83-100 18-35 (253)
250 3bfv_A CAPA1, CAPB2, membrane 21.0 52 0.0018 28.7 2.6 37 114-150 213-249 (271)
251 1o66_A 3-methyl-2-oxobutanoate 20.9 4.7E+02 0.016 23.7 10.5 35 77-111 28-63 (275)
252 1xu9_A Corticosteroid 11-beta- 20.9 2.6E+02 0.0088 23.6 7.0 27 84-116 26-52 (286)
253 1khd_A Anthranilate phosphorib 20.8 23 0.00078 33.0 0.3 55 90-147 87-143 (345)
254 4f3y_A DHPR, dihydrodipicolina 20.8 1.6E+02 0.0056 26.1 5.9 85 106-219 61-146 (272)
255 3la6_A Tyrosine-protein kinase 20.8 36 0.0012 30.1 1.6 36 115-150 224-259 (286)
256 3hgj_A Chromate reductase; TIM 20.8 52 0.0018 30.1 2.7 68 203-271 140-214 (349)
257 3dii_A Short-chain dehydrogena 20.7 3.6E+02 0.012 22.2 8.5 47 168-215 53-104 (247)
258 1ooe_A Dihydropteridine reduct 20.5 2.2E+02 0.0076 23.2 6.4 15 86-100 3-17 (236)
259 2lqo_A Putative glutaredoxin R 20.4 94 0.0032 23.1 3.6 26 22-48 55-81 (92)
260 3kru_A NADH:flavin oxidoreduct 20.4 27 0.00093 32.3 0.7 62 203-271 131-205 (343)
261 3fw2_A Thiol-disulfide oxidore 20.4 38 0.0013 25.6 1.4 104 114-221 30-150 (150)
262 3ks9_A Mglur1, metabotropic gl 20.4 5.2E+02 0.018 24.0 9.6 75 136-226 144-226 (496)
263 2woo_A ATPase GET3; tail-ancho 20.2 41 0.0014 30.2 1.9 32 120-151 225-256 (329)
264 3fbg_A Putative arginate lyase 20.2 1.4E+02 0.0046 26.5 5.2 69 77-147 166-245 (346)
265 1zmt_A Haloalcohol dehalogenas 20.2 81 0.0028 26.4 3.6 13 88-100 3-15 (254)
266 3dmy_A Protein FDRA; predicted 20.1 42 0.0015 32.8 2.0 67 76-151 384-455 (480)
267 3zq6_A Putative arsenical pump 20.0 44 0.0015 29.8 2.0 32 120-151 226-257 (324)
268 4iin_A 3-ketoacyl-acyl carrier 20.0 3.1E+02 0.01 23.0 7.3 104 85-215 28-136 (271)
No 1
>4gim_A Pseudouridine-5'-phosphate glycosidase; alpha-beta-alpha sandwich fold, hydrolase; HET: PSU; 1.80A {Escherichia coli} PDB: 4gij_A 4gik_A* 4gil_A*
Probab=100.00 E-value=1.4e-126 Score=894.43 Aligned_cols=273 Identities=52% Similarity=0.756 Sum_probs=269.9
Q ss_pred CCCchhHHHHHHHHHHHHHCCCcccEEEEEcCceeecCCHHHHHHHHhcCCCcccccccchHHHHhcCCCchhhHHHHHH
Q 023717 1 MPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMF 80 (278)
Q Consensus 1 lPyP~Nle~A~~~E~~vR~~GavPATIaii~G~i~VGl~~~el~~la~~~~~~~K~srRDl~~~~a~~~~GaTTVaaTm~ 80 (278)
||||+|+|+|+++|++||++|||||||||+||+++|||+++|||+||+.++++.|+|||||++++++|++||||||+||+
T Consensus 62 mPyP~Nle~A~~vE~ivR~~GavPATIaiidG~~~vGL~~~ele~la~~~~~v~K~SrRDl~~~~a~~~~GaTTVaaTm~ 141 (335)
T 4gim_A 62 MPFPQNAQTAIEVEETIRKQGAVPATIAIIGGVMKVGLSKEEIELLGREGHNVTKVSRRDLPFVVAAGKNGATTVASTMI 141 (335)
T ss_dssp SCTTHHHHHHHHHHHHHHHTTCEEEEEEEETTEEEESCCHHHHHHHHHHGGGSEEECTTTHHHHHHTTCCEEECHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHHCCCCCceEEEECCEeEEcCCHHHHHHHHhcCCCceeeecccHHHHhhcCCCccccHHHHHH
Confidence 89999999999999999999999999999999999999999999999765679999999999999999999999999999
Q ss_pred HHHHCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecCCCCcceee
Q 023717 81 FASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFT 160 (278)
Q Consensus 81 lA~~aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy~ 160 (278)
+|++|||+||+||||||||||+++|||||+||+||+||||+|||||+|||||||+|||||||+||||+||+||+||+||+
T Consensus 142 lA~~AGI~VFaTGGIGGVHRgae~t~DISADL~eLarTpV~VVcAG~KSILDi~~TLE~LET~GVpVvgy~td~fPaFy~ 221 (335)
T 4gim_A 142 IAALAGIKVFATGGIGGVHRGAEHTFDISADLQELANTNVTVVCAGAASILDLGLTTEYLETFGVPLIGYQTKALPAFFC 221 (335)
T ss_dssp HHHHTTCCEEECSCCCCBBTTHHHHCCBCHHHHHHHHSCCEEEECBCCTTBCHHHHHHHHHHTTCCEEEETCSBCCBTTB
T ss_pred HHHHCCCcEEeeCCcCccCCCCCCCccccchHHHhccCCeEEEeecchhhccchhHHHHHHhcCceEEEecCCCCceeec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCccCcccCCHHHHHHHHHHHHhcCCCCeEEEEeCCCccCCCChHHHHHHHHHHHHHHHHcCCCCccCChHHHHHHH
Q 023717 161 ETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLARVN 240 (278)
Q Consensus 161 ~~Sg~~~~~r~d~~~e~A~~~~~~~~l~l~~g~lvanPiP~e~~~~~~~i~~~i~~Al~ea~~~gi~Gk~vTPflL~~i~ 240 (278)
|+||+++|||+|+++|+|++++++|+||+++|+||+||||+++++|+++|+.+|++|++||+++||+||++|||||++|+
T Consensus 222 r~Sg~~~~~rvd~~~e~A~i~~~~~~lgl~~g~lvanPIP~e~~i~~~~i~~~I~~Al~eA~~~gI~Gk~vTPfLL~~i~ 301 (335)
T 4gim_A 222 RTSPFDVSIRLDSASEIARAMVVKWQSGLNGGLVVANPIPEQFAMPEHTINAAIDQAVAEAEAQGVIGKESTPFLLARVA 301 (335)
T ss_dssp SCCSSBCSEEECCHHHHHHHHHHHHHTTCCSCEEEECCCCGGGCCCHHHHHHHHHHHHHHHHHHTCCGGGHHHHHHHHHH
T ss_pred cCCCCcCcceeCCHHHHHHHHHHHHHcCCCCceEEeCCCCchhcCCHHHHHHHHHHHHHHHHHcCCcCCccChHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 023717 241 ELTGGLSLASNIALVKNNALIGAKISVALAQLR 273 (278)
Q Consensus 241 elT~G~Sl~aNiaLl~nNa~laa~IA~~~~~~~ 273 (278)
|+|+|+||++|++||+|||++|++||++|++|.
T Consensus 302 elT~G~Sl~aNiaLv~nNA~laa~IA~~l~~L~ 334 (335)
T 4gim_A 302 ELTGGDSLKSNIQLVFNNAILASEIAKEYQRLA 334 (335)
T ss_dssp HHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHhCCccHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999974
No 2
>4ex8_A ALNA; alpha/beta/alpha-domain, C-glycosynthase, divalent metal ION ligase; 2.10A {Streptomyces SP} PDB: 4ex9_A*
Probab=100.00 E-value=2e-121 Score=854.38 Aligned_cols=269 Identities=38% Similarity=0.568 Sum_probs=265.5
Q ss_pred hhHHHHHHHHHHHHHCCCcccEEEEEcCceeecCCHHHHHHHHhcCCCcccccccchHHHHhcCCCchhhHHHHHHHHHH
Q 023717 5 QNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASM 84 (278)
Q Consensus 5 ~Nle~A~~~E~~vR~~GavPATIaii~G~i~VGl~~~el~~la~~~~~~~K~srRDl~~~~a~~~~GaTTVaaTm~lA~~ 84 (278)
+|+|||+++|++||++|||||||||+||+|+|||+++||++|++. +++.|+|||||++++++|++||||||+||++|++
T Consensus 47 ~Nle~A~~vE~~vR~~GavPATIai~~G~~~VGL~~~eLe~la~~-~~~~K~SrRDl~~~~a~g~~GaTTVaaTm~lA~~ 125 (316)
T 4ex8_A 47 PSSETASLIEKAVRGAGAVPATIGIAGGKLVVGLTDSLIERFAST-KGIPKISARDIGGALAGGGLGATTVAGTIVIAER 125 (316)
T ss_dssp CSSTHHHHHHHHHHTTTCEEEEEEEETTEEEESCCHHHHHHHHHC-TTCCEECGGGHHHHHHHCSCBEECHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHcCCCcceEEEECCEEEEcCCHHHHHHHhcC-CCccccchhhHHHHHhCCCCccccHHHHHHHHHH
Confidence 799999999999999999999999999999999999999999985 6799999999999999999999999999999999
Q ss_pred CCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecCCCCcceeecCCC
Q 023717 85 VGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSG 164 (278)
Q Consensus 85 aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy~~~Sg 164 (278)
|||+||+||||||||||+++|||||+||+||+||||+|||||+|||||||+|||||||+||||+||+||+||+||+|+||
T Consensus 126 AGI~VFaTGGiGGVHRgae~t~DISaDL~eLarTpV~VVcaG~KsILDi~~TLE~LET~GV~Vvgy~td~fPaFy~r~Sg 205 (316)
T 4ex8_A 126 AGIQVFTTAGIGGVHRRGEDTLDISPDLLQFRKTKMTVVSGGAKSILDHRLTAEYLETAGVPVYGYRTDKLAAFVVREAD 205 (316)
T ss_dssp HTCCEEECSCBCCBBTTHHHHCCBCTHHHHTTTCCEEEEESBBCTTBCHHHHHHHHHHTTCCEEEETCSBCCBTTBSCCS
T ss_pred CCCcEEEeCCccccCCCCCCCcchhhhHHHhcCCCeEEEecccchhhcchHHHHHHHhCCceEEEecCCCCceeeeCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCcccCCHHHHHHHHHHHHhcCCCCeEEEEeCCCccCCCChHHHHHHHHHHHHHHHHcCCCCccCChHHHHHHHHHhC
Q 023717 165 SKVPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLARVNELTG 244 (278)
Q Consensus 165 ~~~~~r~d~~~e~A~~~~~~~~l~l~~g~lvanPiP~e~~~~~~~i~~~i~~Al~ea~~~gi~Gk~vTPflL~~i~elT~ 244 (278)
+++| |+|+++|+|++++++|+||+++|+||+||||+|+++|+++|+.+|++|++||+++||+||++|||||++|+|+|+
T Consensus 206 ~~~p-r~d~~~e~A~~~~a~~~lgl~~g~lvanPiP~e~~~~~~~i~~~I~~Al~eA~~~gi~Gk~vTPfLL~~i~elT~ 284 (316)
T 4ex8_A 206 VPVT-RMDDLHTAARAAEAHWQVNGPGTVLLTSPIDEQDAVDEAIVEAAIAEALAQCDQEGIVGNAVSPYLMKALARASG 284 (316)
T ss_dssp CBCE-EESSHHHHHHHHHHHHHHHCSCEEEEECCCCGGGCCCHHHHHHHHHHHHHHHHHTTCCGGGHHHHHHHHHHHHTT
T ss_pred CcCC-CCCCHHHHHHHHHHHHHhCCCCeEEEEcCCChhhcCCHHHHHHHHHHHHHHHHHcCCccccCCHHHHHHHHHHcC
Confidence 9999 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 023717 245 GLSLASNIALVKNNALIGAKISVALAQLRQQ 275 (278)
Q Consensus 245 G~Sl~aNiaLl~nNa~laa~IA~~~~~~~~~ 275 (278)
|+|+++||+||+|||++|++||++|+++.++
T Consensus 285 G~Sl~aNiaLv~nNa~laa~IA~~l~~l~~~ 315 (316)
T 4ex8_A 285 GMLPKAGRSLLLSTARVAGEFSAALSAVQAE 315 (316)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999998753
No 3
>1vkm_A Conserved hypothetical protein TM1464; indigoidine synthase A-like fold, structural genomics, joint for structural genomics, JCSG; HET: MSE UNL; 1.90A {Thermotoga maritima} SCOP: c.138.1.1
Probab=100.00 E-value=1.9e-120 Score=842.08 Aligned_cols=260 Identities=39% Similarity=0.616 Sum_probs=256.1
Q ss_pred CCCchhHHHHHHHHHHHHHCCCcccEEEEEcCceeecCCHHHHHHHHhcCCCcccccccchHHHHhcCCCchhhHHHHHH
Q 023717 1 MPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMF 80 (278)
Q Consensus 1 lPyP~Nle~A~~~E~~vR~~GavPATIaii~G~i~VGl~~~el~~la~~~~~~~K~srRDl~~~~a~~~~GaTTVaaTm~ 80 (278)
||||+|+|||+++|++||++|||||||||+||+++|||+++||++|+ . +++.|+|||||++++++|++||||||+||+
T Consensus 37 lPyP~N~e~A~~vE~~vR~~GavPATIaii~G~~~VGL~~~eLe~la-~-~~~~K~SrRDl~~~~a~g~~GaTTVaaTm~ 114 (297)
T 1vkm_A 37 LPRKEAIELFRRAKEISREKGFQLAVIGILKGKIVAGMSEEELEAMM-R-EGADKVGTREIPIVVAEGKNAATTVSATIF 114 (297)
T ss_dssp SCHHHHHHHHHHHHHHHHHHTCEEEEEEEETTEEEESCCHHHHHHHH-H-HCCEEECGGGHHHHHHHTCCEEECHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHhCCCccceEEEECCEEEECCCHHHHHHHh-c-CCCccccHhhHHHHHhCCCCchhhHHHHHH
Confidence 89999999999999999999999999999999999999999999999 3 579999999999999999999999999999
Q ss_pred HHHHCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecCCCCcceee
Q 023717 81 FASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFT 160 (278)
Q Consensus 81 lA~~aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy~ 160 (278)
+|++|||+||+|||||||||| |||||+||+||+||||+|||||+|||||||+|||||||+||||+||+||+||+||+
T Consensus 115 lA~~AGI~VFaTGGiGGVHRg---t~DISaDL~eL~rTpV~VVcaG~KsILDi~~TLE~LET~GV~Vvgy~t~~fPaF~t 191 (297)
T 1vkm_A 115 LSRRIGIEVVVTGGTGGVHPG---RVDVSQDLTEMSSSRAVLVSSGIKSILDVEATFEMLETLEIPLVGFRTNEFPLFFS 191 (297)
T ss_dssp HHHHHTCCEEECSCBCCBCTT---SSCBCHHHHHHTTCCEEEEESBBCTTSCHHHHHHHHHHTTCCEEEESCSBCCBTTB
T ss_pred HHHHcCCcEEEecccccccCC---CcccchhHHHhcCCCeEEEecccchhhcchhHHHHHHhCCceEEEecCCCCCceec
Confidence 999999999999999999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCccCcccCCHHHHHHHHHHHHhcCCCCeEEEEeCCCccCCCChHHHHHHHHHHHHHHHHcCCCCccCChHHHHHHH
Q 023717 161 ETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLARVN 240 (278)
Q Consensus 161 ~~Sg~~~~~r~d~~~e~A~~~~~~~~l~l~~g~lvanPiP~e~~~~~~~i~~~i~~Al~ea~~~gi~Gk~vTPflL~~i~ 240 (278)
|+||+++| |+|+++|+|++++++|+||+++|+||+||||+|+++|+++|+++|++|++| |+||++|||||+||+
T Consensus 192 r~Sg~~~p-~~d~~~e~A~~~~~~~~lgl~~g~lvanPiP~e~~~~~~~i~~~I~~Al~e-----i~Gk~vTPflL~~i~ 265 (297)
T 1vkm_A 192 RKSGRRVP-RIENVEEVLKIYESMKEMELEKTLMVLNPVPEEYEIPHDEIERLLEKIELE-----VEGKEVTPFLLKKLV 265 (297)
T ss_dssp SCCSCBCC-EECSHHHHHHHHHHHHHTTCCSEEEEECCCCGGGCCCHHHHHHHHHTCCCC-----CCGGGHHHHHHHHHH
T ss_pred CCCCCcCC-CCCCHHHHHHHHHHHHHhCCCCeEEEEcCCChhhcCCHHHHHHHHHHHHHH-----hhCcccChHHHHHHH
Confidence 99999999 999999999999999999999999999999999999999999999999998 999999999999999
Q ss_pred HHhCCccHHHHHHHHHHHHHHHHHHHHHHHH
Q 023717 241 ELTGGLSLASNIALVKNNALIGAKISVALAQ 271 (278)
Q Consensus 241 elT~G~Sl~aNiaLl~nNa~laa~IA~~~~~ 271 (278)
|+|+|+|+++|++||+|||++|++||++|++
T Consensus 266 elT~G~Sl~aNiaLv~nNa~laa~IA~~l~~ 296 (297)
T 1vkm_A 266 EMTNGRTLKANLALLEENVKLAGEIAVKLKR 296 (297)
T ss_dssp HHTTTHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHhCCccHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999864
No 4
>3h5q_A PYNP, pyrimidine-nucleoside phosphorylase; structural genomics, glycosyltransferase, transferase; HET: MSE THM; 1.94A {Staphylococcus aureus}
Probab=87.43 E-value=1.7 Score=42.39 Aligned_cols=204 Identities=17% Similarity=0.113 Sum_probs=120.4
Q ss_pred cCCHHHHHHHHhc-CCCccccccc----chHHHHhcCCCchhhHHHHHHHHHHCCCcEEEecccccccCCCccccccccc
Q 023717 37 GLSTEELERLAKL-GSKAQKTARR----DIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSD 111 (278)
Q Consensus 37 Gl~~~el~~la~~-~~~~~K~srR----Dl~~~~a~~~~GaTTVaaTm~lA~~aGI~VFaTGGIGGVHrg~~~t~DiSaD 111 (278)
|++.+|+..+++. .+...++.-. .+-..++.|..|--|--...+++..+|++|.-.||=+=-|+++ |+|
T Consensus 52 Get~eEiag~~~Am~~~~~~~~~~~~~~~~vD~~gTGGdG~~tSt~~A~vvAa~Gv~VaKHGnRa~ss~~G------saD 125 (436)
T 3h5q_A 52 DMNDDERVALTMAMVNSGDMIDLSDIKGVKVDKHSTGGVGDTTTLVLAPLVAAVDVPVAKMSGRGLGHTGG------TID 125 (436)
T ss_dssp CCCHHHHHHHHHHHHTTSCCCCCTTSCSCCEEEEECCCTTCCHHHHHHHHHHHTTCCEEEECCCCSSSSCC------HHH
T ss_pred CCCHHHHHHHHHHHHHhCCcCCccccCCCceeecCCCCCCCChHHHHHHHHHhCCCCEEeECCCCCCCccc------HHH
Confidence 6899999988752 1122222221 1111234555665554445677788999999999887667776 566
Q ss_pred hhhhcCCCeEEEec-ccccccchhhhHhHhhhCCeeEEeecCCCCcce---e-ecCCCCccCcccCCH-HHHHHHHHHHH
Q 023717 112 LTELGRTPVAVVSA-GIKSILDIPRTLEYLETHGVCVAAYKTNEFPAF---F-TETSGSKVPCRVDSP-EDCARLIDVNM 185 (278)
Q Consensus 112 L~eL~rtpV~VVca-G~KsILDi~~TLE~LET~GV~V~gy~t~~fPaF---y-~~~Sg~~~~~r~d~~-~e~A~~~~~~~ 185 (278)
+-| +- |.+-=|+.....+.|+..|+..+++..+..|+. | .|+. +. .+++. --.|.|+.-+-
T Consensus 126 vLE---------aLpGi~~~ls~e~~~~~l~~~g~~fl~~a~~~~Pa~~~l~~lR~~-~~---TvfniPLinaSimSKKl 192 (436)
T 3h5q_A 126 KLE---------AIDGFHVEIDEATFVKLVNENKVAVVGQSGNLTPADKKLYALRDV-TG---TVNSIPLIASSIMSKKI 192 (436)
T ss_dssp HHT---------TSTTCCCCCCHHHHHHHHHHHSEEEECCCSSSCHHHHHHHHHHHT-TT---CSSCHHHHHHHHHHHHH
T ss_pred HHH---------hCcCCCCCCCHHHHHHHHHHcCCEEEccccccCHHHHHHHHHHhc-cC---CcCChhhhccchhcccc
Confidence 655 22 666668889999999999999886557777873 3 2222 22 34444 34445555555
Q ss_pred hcCCCCeEEEEeCCCccCCCChHHHHHHHHHHHHHH-HHcCCC-------CccCChHHH--------HHHHHHhCCccHH
Q 023717 186 KLKLGSGLVIGVPIPREHAASGRVIESAIQSALREA-REKNIT-------GNAETPFLL--------ARVNELTGGLSLA 249 (278)
Q Consensus 186 ~l~l~~g~lvanPiP~e~~~~~~~i~~~i~~Al~ea-~~~gi~-------Gk~vTPflL--------~~i~elT~G~Sl~ 249 (278)
-.+ ...+|+-+++-...-+...+.-+.+.+++.+- .+.|.+ |. +||=+ .++.+.-.|+--.
T Consensus 193 pag-~~~~vlgV~~G~gaf~~~~~~a~~lA~~l~~lG~~~G~~~v~~lt~~~--~PlG~~~G~~~E~ae~~~vL~G~~~~ 269 (436)
T 3h5q_A 193 AAG-ADAIVLDVKTGSGAFMKTLEDAEALAHAMVRIGNNVGRNTMAIISDMN--QPLGRAIGNALELQEAIDTLKGQGPK 269 (436)
T ss_dssp HTT-CSEEEEEEEESTTSSBCSHHHHHHHHHHHHHHHHHHTCCEEEEEEECS--SCSSSEEESHHHHHHHHHHHTTCSCH
T ss_pred ccC-CCeEEEeeecCccccCCCHHHHHHHHHHHHHhhhhcCCeEEEEEcCCC--CCCCCCCCCHHHHHHHHHHHCCCCCc
Confidence 555 67889999855544444433344445555443 344542 33 67532 3355555665333
Q ss_pred HHHHHHHHHHHHH
Q 023717 250 SNIALVKNNALIG 262 (278)
Q Consensus 250 aNiaLl~nNa~la 262 (278)
.=..++..||..+
T Consensus 270 ~~~d~vl~nAa~~ 282 (436)
T 3h5q_A 270 DLTELVLTLGSQM 282 (436)
T ss_dssp HHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHH
Confidence 3455566666443
No 5
>1vqu_A Anthranilate phosphoribosyltransferase 2; 17130499, structur genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI; 1.85A {Nostoc SP}
Probab=85.06 E-value=1.4 Score=41.77 Aligned_cols=107 Identities=25% Similarity=0.399 Sum_probs=71.2
Q ss_pred cCCHHHHHHHHhc-CCCcccc----------cc--cchHHHHhcCCCchhh--H-HHHHHHHHHCCCcEEEecccccccC
Q 023717 37 GLSTEELERLAKL-GSKAQKT----------AR--RDIAHVVATRGNGATT--V-SATMFFASMVGIPVFVTGGIGGVHR 100 (278)
Q Consensus 37 Gl~~~el~~la~~-~~~~~K~----------sr--RDl~~~~a~~~~GaTT--V-aaTm~lA~~aGI~VFaTGGIGGVHr 100 (278)
|.+.+||.-+++. .+...++ +. .++-..+..|.+|.-| + -.+.+++..+|++|.-.|+=+=-|+
T Consensus 73 Get~eEiag~~~am~~~~~~~~~~~~~~~~~~~~~~~~vD~~gTGGdg~~tfNiSt~~A~v~Aa~Gv~VaKHGnR~~ss~ 152 (374)
T 1vqu_A 73 GVSADELTGMAEVLQSQSKMGTGENYSQLPITNSPFSIIDTCGTGGDGSSTFNISTAVAFVAAAYGVPVAKHGNRSASSL 152 (374)
T ss_dssp CCCHHHHHHHHHHHHTTCCC-----------CCSSSCCEEEEECC---CCBCCHHHHHHHHHHHTTCCEEEEEECC--CT
T ss_pred CCCHHHHHHHHHHHHHhCCccccccccccCccccCCCeeEEeCCCCCCCCccchHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 7899999988752 1222233 21 1111135667777766 2 2445778889999999999776677
Q ss_pred CCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecCCCCccee
Q 023717 101 HGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFF 159 (278)
Q Consensus 101 g~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy 159 (278)
++ |+|+-| +-|.+-=++....-+.||..|+..+ |..+..|++.
T Consensus 153 ~G------saDvLE---------aLGv~~~~~~e~~~~~l~~~gi~fl-~a~~~hPa~k 195 (374)
T 1vqu_A 153 TG------SADVLE---------ALGVNLGASPEKVQAALQEVGITFL-FAPGWHPALK 195 (374)
T ss_dssp TC------HHHHHH---------HTTCCTTCCHHHHHHHHHHTSEEEE-EETTSSGGGG
T ss_pred CC------HHHHHH---------hCCCCCCCCHHHHHHHHHHCCEEEE-EhHHhCHHHH
Confidence 76 778777 3466666888899999999999988 7788888864
No 6
>2dsj_A Pyrimidine-nucleoside (thymidine) phosphorylase; pyrimidine-nucleoside phosphorylase, structural genomics; 1.80A {Thermus thermophilus}
Probab=84.93 E-value=8 Score=37.47 Aligned_cols=212 Identities=17% Similarity=0.081 Sum_probs=117.3
Q ss_pred cCCHHHHHHHHhc-CCCcccccccc---hHHHHhcCCCchhhHHHHHHHHHHCCCcEEEecccccccCCCccccccccch
Q 023717 37 GLSTEELERLAKL-GSKAQKTARRD---IAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDL 112 (278)
Q Consensus 37 Gl~~~el~~la~~-~~~~~K~srRD---l~~~~a~~~~GaTTVaaTm~lA~~aGI~VFaTGGIGGVHrg~~~t~DiSaDL 112 (278)
|+|.+|+..|++. .+...++...+ +-..+..|..|..+--.+.+++..+|++|.=.||=|=-|+++ |+|.
T Consensus 49 Get~eEiag~a~aM~~~~~~l~~~~~~~~vD~~gTGGdG~niSt~~a~vvAa~Gv~VaKhGnR~~ss~~G------saDv 122 (423)
T 2dsj_A 49 GLDPEETLWLTETMARSGKVLDLSGLPHPVDKHSSGGVGDKVSLVVGPILAASGCTFAKMSGRGLAHTGG------TIDK 122 (423)
T ss_dssp CCCHHHHHHHHHHHHTSSBCCCCTTSSSBEEEEEESSSCCSTHHHHHHHHHTTTCBEEEECCCCBTTBCC------HHHH
T ss_pred CCCHHHHHHHHHHHHHhCCcCCccccCCceeEecCCCCCccHHHHHHHHHHhCCCcEEEECCCCCCCCcc------HHHH
Confidence 8999999988742 12222332222 112235666666544566788899999999999965557776 7777
Q ss_pred hhhcCCCeEEEec-ccccccchhhhHhHhhhCCeeEEeecCCCCcceeecCCCCccCcccCCHHHHHHHHHHHH-hcCCC
Q 023717 113 TELGRTPVAVVSA-GIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNM-KLKLG 190 (278)
Q Consensus 113 ~eL~rtpV~VVca-G~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~~-~l~l~ 190 (278)
-| +- |.+-=|+.....+.||..|+..++-..+.+|++-.--.=.+.-..++|...+..=+-.++ -.| .
T Consensus 123 LE---------aL~Gv~i~l~~e~~~~~l~~~Gi~f~~~~~~~~PA~k~l~~lR~~lgtv~Ti~nilgpl~nkK~pag-~ 192 (423)
T 2dsj_A 123 LE---------SVPGWRGEMTEAEFLERARRVGLVIAAQSPDLAPLDGKLYALRDVTATVESVPLIASSIMSKKLAAG-A 192 (423)
T ss_dssp HT---------TSTTCCCCCCHHHHHHHHHHTSEEEESCGGGBSHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHT-C
T ss_pred HH---------hCCCCCCCCCHHHHHHHHHHcCEEEEecccccChHHHHHHHHHHHhcccCcHHHhHHHHhcCccCCC-C
Confidence 66 44 777778899999999999999952224667764211000000012556555544333322 334 4
Q ss_pred CeEEEEeCCCccCCC-ChHHHHHHHHHHHHHHHHcCCCCccC-----ChH--------HHHHHHHHhCCccHHHHHHHHH
Q 023717 191 SGLVIGVPIPREHAA-SGRVIESAIQSALREAREKNITGNAE-----TPF--------LLARVNELTGGLSLASNIALVK 256 (278)
Q Consensus 191 ~g~lvanPiP~e~~~-~~~~i~~~i~~Al~ea~~~gi~Gk~v-----TPf--------lL~~i~elT~G~Sl~aNiaLl~ 256 (278)
..+|+-+|+=.-.-+ +.++.+.+-+.-..-....|.+-..+ .|+ -..++-+.-.|+.-..-..++.
T Consensus 193 ~~~vldV~~G~Gaf~~~~~~~~~lA~~l~~lg~~~G~~~v~~l~dg~~plg~~~G~a~E~ae~i~vL~G~g~~~~~d~vl 272 (423)
T 2dsj_A 193 RSIVLDVKVGRGAFMKTLEEARLLAKTMVAIGQGAGRRVRALLTSMEAPLGRAVGNAIEVREAIEALKGEGPGDLLEVAL 272 (423)
T ss_dssp SEEEEEEEESSSTTCBCHHHHHHHHHHHHHHHHHTTCEEEEEEEECSSCSSSEEESHHHHHHHHHHHTTCSCHHHHHHHH
T ss_pred CeEEEEeccCCCcccCCHHHHHHHHHHHHHHHHHcCCeEEEEEcCCCCcccccCCCHHHHHHHHHHHCCCCchhHHHHHH
Confidence 556666655544333 44444443333333444555543221 233 2233334556653333355666
Q ss_pred HHHHHHHH
Q 023717 257 NNALIGAK 264 (278)
Q Consensus 257 nNa~laa~ 264 (278)
-||..+-.
T Consensus 273 ~nAa~~L~ 280 (423)
T 2dsj_A 273 ALAEEALR 280 (423)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 67665443
No 7
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=84.12 E-value=3.3 Score=35.98 Aligned_cols=81 Identities=17% Similarity=0.158 Sum_probs=38.4
Q ss_pred CCchhHHHHHHHHHHHHHCCCcccEEEEE-cCc-eeecCCHHHHHHHH----hcCCCcccccccchHHHHhcCCCchhhH
Q 023717 2 PYPQNFETAKEVEAIVRNNGAVPATIAIL-EGL-PCVGLSTEELERLA----KLGSKAQKTARRDIAHVVATRGNGATTV 75 (278)
Q Consensus 2 PyP~Nle~A~~~E~~vR~~GavPATIaii-~G~-i~VGl~~~el~~la----~~~~~~~K~srRDl~~~~a~~~~GaTTV 75 (278)
++.++++.+.++-+.+++.| +|-.+-+. +|. +.-|++.+++++++ +.+-+.+|++- ....
T Consensus 126 ~~~~~~~~~~~v~~~~~~~g-~~viv~~~~~G~~l~~~~~~~~~~~~a~~a~~~Gad~i~~~~-------------~~~~ 191 (273)
T 2qjg_A 126 EDWEAYRDLGMIAETCEYWG-MPLIAMMYPRGKHIQNERDPELVAHAARLGAELGADIVKTSY-------------TGDI 191 (273)
T ss_dssp THHHHHHHHHHHHHHHHHHT-CCEEEEEEECSTTCSCTTCHHHHHHHHHHHHHTTCSEEEECC-------------CSSH
T ss_pred CHHHHHHHHHHHHHHHHHcC-CCEEEEeCCCCcccCCCCCHhHHHHHHHHHHHcCCCEEEECC-------------CCCH
Confidence 34456667777777777766 34433221 222 11234554443331 12223555551 0223
Q ss_pred HHHHHHHHHCCCcEEEecccc
Q 023717 76 SATMFFASMVGIPVFVTGGIG 96 (278)
Q Consensus 76 aaTm~lA~~aGI~VFaTGGIG 96 (278)
...-.++...+|||++.|||+
T Consensus 192 ~~l~~i~~~~~ipvva~GGi~ 212 (273)
T 2qjg_A 192 DSFRDVVKGCPAPVVVAGGPK 212 (273)
T ss_dssp HHHHHHHHHCSSCEEEECCSC
T ss_pred HHHHHHHHhCCCCEEEEeCCC
Confidence 333444555566666666655
No 8
>1khd_A Anthranilate phosphoribosyltransferase; type 3 PRT fold, nucleotide binding fold; 1.86A {Pectobacterium carotovorum} SCOP: a.46.2.1 c.27.1.1 PDB: 1kgz_A
Probab=81.30 E-value=1 Score=42.24 Aligned_cols=144 Identities=25% Similarity=0.316 Sum_probs=84.8
Q ss_pred cCCHHHHHHHHhc-CCCcccccc--cchHHHHhcCCCchhh---HHHHHHHHHHCCCcEEEeccccccc-CCCccccccc
Q 023717 37 GLSTEELERLAKL-GSKAQKTAR--RDIAHVVATRGNGATT---VSATMFFASMVGIPVFVTGGIGGVH-RHGEHTMDIS 109 (278)
Q Consensus 37 Gl~~~el~~la~~-~~~~~K~sr--RDl~~~~a~~~~GaTT---VaaTm~lA~~aGI~VFaTGGIGGVH-rg~~~t~DiS 109 (278)
|.|.+|+.-+++. .+...++.. .++-..+..|.+|.-| -..+.+++..+|++|.-.|+=+=-| +++ |
T Consensus 59 get~eEiag~~~am~~~~~~~~~~~~~~vD~~gTGGdg~~tfNiSt~~A~v~Aa~Gv~VakHGnr~~ss~~~G------s 132 (345)
T 1khd_A 59 GERPEEIAGAASALLADAQPFPRPDYDFADIVGTGGDGTNSINISTASAFVAASCGAKVAKHGNRSVCQPLAG------S 132 (345)
T ss_dssp CCCHHHHHHHHHHHHHTSCCCCCCSSCCEEEEECCCCSSCBCCCHHHHHHHHHHHTCCEEEEECC---------------
T ss_pred CCCHHHHHHHHHHHHHhCCcCCCCCCCeeeecCCCCCCCCccchHHHHHHHHHhCCCcEEEeCCCCCCCCccc------H
Confidence 7899999988752 112223322 1222245567777766 5566678888999999999877667 766 5
Q ss_pred cchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecCCCCcceee----cCC-CC--------------ccCc-
Q 023717 110 SDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFT----ETS-GS--------------KVPC- 169 (278)
Q Consensus 110 aDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy~----~~S-g~--------------~~~~- 169 (278)
+|+-| +-|.+-=++....-+.||..|+..+ |....+|++.. |+. |+ ..++
T Consensus 133 aDvLe---------aLGv~~~~~~~~~~~~l~~~gi~fl-~a~~~hPa~k~l~~~R~~Lg~rTvfn~lgpL~nPa~~~~~ 202 (345)
T 1khd_A 133 CDLLQ---------AFGIRLDMSAEDSRQALDDLNVCFL-FAPQYHTGFRHAMPVRQQLKTRTIFNVLGPLINPARPPKA 202 (345)
T ss_dssp CHHHH---------HTTCCTTCCHHHHHHHHHHHSEEEE-EHHHHCGGGGGGHHHHHHHCSCCTHHHHGGGCCTTCCSEE
T ss_pred HHHHH---------hCCCCCCCCHHHHHHHHHHCCEEEE-ehhhhCHHHHHHHHHHHHhCCCCHHHHHHHhcCCcCCCeE
Confidence 77766 3456666888888889999998887 55566666431 100 11 1111
Q ss_pred --ccCCHHHHHHHHHHHHhcCCCCeEEEE
Q 023717 170 --RVDSPEDCARLIDVNMKLKLGSGLVIG 196 (278)
Q Consensus 170 --r~d~~~e~A~~~~~~~~l~l~~g~lva 196 (278)
-+-+++.+-.+.+.-..+|.+.+++|.
T Consensus 203 v~GV~~~~~~~~~a~~l~~lG~~~a~vv~ 231 (345)
T 1khd_A 203 LIGVYSPELVLPIAQALKVLGYKNAAVVH 231 (345)
T ss_dssp EEECSSGGGHHHHHHHHHHTTCSEEEEEE
T ss_pred EEeecCHHHHHHHHHHHHHhCCCeEEEEe
Confidence 122444444444566678888888777
No 9
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=78.25 E-value=7.9 Score=33.49 Aligned_cols=16 Identities=13% Similarity=0.258 Sum_probs=6.9
Q ss_pred hhhhHhHhhhCCeeEEe
Q 023717 133 IPRTLEYLETHGVCVAA 149 (278)
Q Consensus 133 i~~TLE~LET~GV~V~g 149 (278)
...-+++|+ .|..-+|
T Consensus 187 ~~da~~~l~-aGA~~iG 202 (225)
T 1mzh_A 187 LETAISMIE-AGADRIG 202 (225)
T ss_dssp HHHHHHHHH-TTCSEEE
T ss_pred HHHHHHHHH-hCchHHH
Confidence 344444554 3444333
No 10
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=78.23 E-value=1.9 Score=37.26 Aligned_cols=68 Identities=22% Similarity=0.292 Sum_probs=28.1
Q ss_pred hhHHHHHHHHHHCCCcEEEecccccccCCCccccccccchhhhcCC---CeEEEecccccccchhhhHhHhhhCCeeEEe
Q 023717 73 TTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRT---PVAVVSAGIKSILDIPRTLEYLETHGVCVAA 149 (278)
Q Consensus 73 TTVaaTm~lA~~aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rt---pV~VVcaG~KsILDi~~TLE~LET~GV~V~g 149 (278)
+.....-.++....|||++-|||+-. .|+.++.++ -|+|.++=.+.=.++....+||+.+|++|--
T Consensus 187 ~~~~~i~~l~~~~~ipvia~GGI~~~-----------ed~~~~~~~Gadgv~vgsal~~~~~~~~~~~~~l~~~g~~~~~ 255 (266)
T 2w6r_A 187 YDTEMIRFVRPLTTLPIIASGGAGKM-----------EHFLEAFLAGADAALAASVFHFREIDMRELKEYLKKHGVNVRL 255 (266)
T ss_dssp CCHHHHHHHGGGCCSCEEEESCCCSH-----------HHHHHHHHHTCSEEEESTTTC----------------------
T ss_pred CCHHHHHHHHHHcCCCEEEeCCCCCH-----------HHHHHHHHcCCHHHHccHHHHcCCCCHHHHHHHHHHCCCcccc
Confidence 34556667778889999999988731 355555443 3444444455666888999999999998875
Q ss_pred ec
Q 023717 150 YK 151 (278)
Q Consensus 150 y~ 151 (278)
|.
T Consensus 256 ~~ 257 (266)
T 2w6r_A 256 EG 257 (266)
T ss_dssp --
T ss_pred cc
Confidence 54
No 11
>2tpt_A Thymidine phosphorylase; transferase, salvage pathway; 2.60A {Escherichia coli} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 PDB: 1azy_A 1tpt_A 1otp_A
Probab=77.62 E-value=2.1 Score=41.57 Aligned_cols=146 Identities=20% Similarity=0.163 Sum_probs=88.4
Q ss_pred cCCHHHHHHHHhc-CCCccccccc------chHHHHhcCCCchhhHHHHHHHHHHCCCcEEEecccccccCCCccccccc
Q 023717 37 GLSTEELERLAKL-GSKAQKTARR------DIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDIS 109 (278)
Q Consensus 37 Gl~~~el~~la~~-~~~~~K~srR------Dl~~~~a~~~~GaTTVaaTm~lA~~aGI~VFaTGGIGGVHrg~~~t~DiS 109 (278)
|+|.+|+..|++. .+...++.-. ++-..+..|..|..+--.+.+++..+|++|.=.||=|=-|+++ |
T Consensus 50 Get~eEiag~~~Am~~~~~~~~~~~~~~~~~~vD~~gTGGdG~~iSt~~A~vvAa~Gv~VaKHGnR~~ss~~G------s 123 (440)
T 2tpt_A 50 DMTMPERVSLTMAMRDSGTVLDWKSLHLNGPIVDKHSTGGVGDVTSLMLGPMVAACGGYIPMISGRGLGHTGG------T 123 (440)
T ss_dssp CCCHHHHHHHHHHHHHTSBCCCCTTTTCSSCBEEEEECCCSSCCHHHHHHHHHHHTTCBEEEEECCCCTTSCC------H
T ss_pred CCCHHHHHHHHHHHHHhCCcCCCcccccCCCeeeeCCCCCCCccHHHHHHHHHHhCCCcEEEECCCCCCCccc------H
Confidence 8999999988742 1112222211 1222334455665544455678889999999999987678887 6
Q ss_pred cchhhhcCCCeEEEec-ccccccchhhhHhHhhhCCeeEEeecCCCCcceee----cCCCCccCcccCCHHHHHHHHHHH
Q 023717 110 SDLTELGRTPVAVVSA-GIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFT----ETSGSKVPCRVDSPEDCARLIDVN 184 (278)
Q Consensus 110 aDL~eL~rtpV~VVca-G~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy~----~~Sg~~~~~r~d~~~e~A~~~~~~ 184 (278)
+|+-| +- |.+-=|+.....+.|+..|+..++-..+..|++-. |+. .+..+++ |--.+.++..+
T Consensus 124 aDvLE---------aL~Gv~~~ls~e~~~~~l~~~G~~fl~a~~~~hPA~k~l~~lR~~-lrTvfNi--PLin~s~lskk 191 (440)
T 2tpt_A 124 LDKLE---------SIPGFDIFPDDNRFREIIKDVGVAIIGQTSSLAPADKRFYATRDI-TATVDSI--PLITASILAKK 191 (440)
T ss_dssp HHHHT---------TSTTCCSCCCHHHHHHHHHHTSEEEEECCTTBSHHHHHHHHHHHH-TTCCCCH--HHHHHHHHHHH
T ss_pred HHHHH---------hCcCCCCCCCHHHHHHHHHHcCEEEEcCchhhCHHHHHHHHHHHh-hCCccCh--hhcCCHHHHHH
Confidence 67666 32 66666899999999999999997544677887431 111 1112222 22223334334
Q ss_pred HhcCCCCeEEEEeCCCc
Q 023717 185 MKLKLGSGLVIGVPIPR 201 (278)
Q Consensus 185 ~~l~l~~g~lvanPiP~ 201 (278)
-..|.. .+|+-+|...
T Consensus 192 ~A~G~~-alVvdVk~G~ 207 (440)
T 2tpt_A 192 LAEGLD-ALVMDVKVGS 207 (440)
T ss_dssp HTTCCS-EEEEEEEEST
T ss_pred HhcCCC-eEEEEeccCC
Confidence 344655 7777665553
No 12
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=76.10 E-value=21 Score=32.84 Aligned_cols=158 Identities=15% Similarity=0.118 Sum_probs=97.5
Q ss_pred HHHHHHHHCCCcEEEecc--cccccCCCcccccccc--------chhhhcCCCeEE-EecccccccchhhhHhHhhhCCe
Q 023717 77 ATMFFASMVGIPVFVTGG--IGGVHRHGEHTMDISS--------DLTELGRTPVAV-VSAGIKSILDIPRTLEYLETHGV 145 (278)
Q Consensus 77 aTm~lA~~aGI~VFaTGG--IGGVHrg~~~t~DiSa--------DL~eL~rtpV~V-VcaG~KsILDi~~TLE~LET~GV 145 (278)
.+..++..+|+++..+|| ++-+..|-..+-.++- .+..-...||++ .=.|--+.+++-+|...|+..|+
T Consensus 33 ~sA~l~e~aGf~ai~vs~~s~a~~~~G~pD~~~vt~~em~~~~~~I~r~~~~PviaD~d~Gyg~~~~v~~~v~~l~~aGa 112 (298)
T 3eoo_A 33 YAAKMAEAVGFKAVYLSGGGVAANSLGIPDLGISTMDDVLVDANRITNATNLPLLVDIDTGWGGAFNIARTIRSFIKAGV 112 (298)
T ss_dssp HHHHHHHHHTCSCEEECHHHHHHHTTCCCSSSCCCHHHHHHHHHHHHHHCCSCEEEECTTCSSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCEEEECcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhhcCCeEEEECCCCCCCHHHHHHHHHHHHHhCC
Confidence 455667899999988875 4435666555544442 122234567555 34554478889999999999998
Q ss_pred eEEeecCCCCcceeecCCCCccCcccCCHHHHHHHHHHHH-hcCCCCeEEEEeCCCccCCCChHHHHHHHHHHHHHHHHc
Q 023717 146 CVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNM-KLKLGSGLVIGVPIPREHAASGRVIESAIQSALREAREK 224 (278)
Q Consensus 146 ~V~gy~t~~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~~-~l~l~~g~lvanPiP~e~~~~~~~i~~~i~~Al~ea~~~ 224 (278)
-=+-.....+|- .-|+.-...+-+.+|.++-|++-. ...-+.-+|++.= ++.-.+.++++|++|.+.++.
T Consensus 113 agv~iEDq~~~k----~cGh~~gk~l~~~~e~~~ri~Aa~~A~~~~~~~I~ART----Da~~~~gldeai~Ra~ay~~A- 183 (298)
T 3eoo_A 113 GAVHLEDQVGQK----RCGHRPGKECVPAGEMVDRIKAAVDARTDETFVIMART----DAAAAEGIDAAIERAIAYVEA- 183 (298)
T ss_dssp SEEEEECBCCCC----CTTCCCCCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEE----CTHHHHHHHHHHHHHHHHHHT-
T ss_pred eEEEECCCCCCc----ccCCCCCCeecCHHHHHHHHHHHHHhccCCCeEEEEee----hhhhhcCHHHHHHHHHhhHhc-
Confidence 777665555542 334443445677777776665443 3332344666652 222345688899988777653
Q ss_pred CC-----CCccCChHHHHHHHHHhC
Q 023717 225 NI-----TGNAETPFLLARVNELTG 244 (278)
Q Consensus 225 gi-----~Gk~vTPflL~~i~elT~ 244 (278)
|- .|. -++-.++++.+..+
T Consensus 184 GAD~if~~~~-~~~ee~~~~~~~~~ 207 (298)
T 3eoo_A 184 GADMIFPEAM-KTLDDYRRFKEAVK 207 (298)
T ss_dssp TCSEEEECCC-CSHHHHHHHHHHHC
T ss_pred CCCEEEeCCC-CCHHHHHHHHHHcC
Confidence 33 243 26777777776654
No 13
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=75.30 E-value=2.1 Score=36.50 Aligned_cols=63 Identities=29% Similarity=0.405 Sum_probs=44.8
Q ss_pred hHHHHHHHHHHCCCcEEEecccccccCCCccccccccchhhhcCCC---eEEEecccccccchhhhHhHhhhCCeeE
Q 023717 74 TVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTP---VAVVSAGIKSILDIPRTLEYLETHGVCV 147 (278)
Q Consensus 74 TVaaTm~lA~~aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtp---V~VVcaG~KsILDi~~TLE~LET~GV~V 147 (278)
.....-.++...+|||++-|||+-. .|+.++.++. |+|.++=.++=+|+...+++|+.+|++|
T Consensus 184 ~~~~i~~l~~~~~ipvia~GGI~~~-----------~d~~~~~~~Gadgv~vgsal~~~~~~~~~~~~~l~~~~~~~ 249 (252)
T 1ka9_F 184 DLRLTRMVAEAVGVPVIASGGAGRM-----------EHFLEAFQAGAEAALAASVFHFGEIPIPKLKRYLAEKGVHV 249 (252)
T ss_dssp CHHHHHHHHHHCSSCEEEESCCCSH-----------HHHHHHHHTTCSEEEESHHHHTTSSCHHHHHHHHHHTTCCB
T ss_pred CHHHHHHHHHHcCCCEEEeCCCCCH-----------HHHHHHHHCCCHHHHHHHHHHcCCCCHHHHHHHHHHCCCCc
Confidence 3556667788889999999888731 4555555543 4444433556678999999999999987
No 14
>2elc_A Trp D, anthranilate phosphoribosyltransferase; structural genomics, NPPSFA, national project O structural and functional analyses; 1.55A {Thermus thermophilus} SCOP: a.46.2.1 c.27.1.1 PDB: 1v8g_A
Probab=75.16 E-value=1.8 Score=40.22 Aligned_cols=107 Identities=24% Similarity=0.334 Sum_probs=72.0
Q ss_pred cCCHHHHHHHHhc-CC--CcccccccchHHHHhcCCCchhh---HHHHHHHHHHCCCcEEEecccccccCCCcccccccc
Q 023717 37 GLSTEELERLAKL-GS--KAQKTARRDIAHVVATRGNGATT---VSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISS 110 (278)
Q Consensus 37 Gl~~~el~~la~~-~~--~~~K~srRDl~~~~a~~~~GaTT---VaaTm~lA~~aGI~VFaTGGIGGVHrg~~~t~DiSa 110 (278)
|.|.+|+.-+++. .+ .....+..++-..+..+.+|.-| --.+.+++..+|++|.-.|+=+=-|+++ |+
T Consensus 46 get~~Eiag~~~am~~~~~~~~~~~~~~vD~~gTGGdg~~tfNiSt~~a~v~Aa~Gv~V~kHGnr~~ss~~G------sa 119 (329)
T 2elc_A 46 GERPHEIAAMARAMREAARPLRVHRRPLLDIVGTGGDGKGLMNLSTLAALVAAAGGVAVAKHGNRAASSRAG------SA 119 (329)
T ss_dssp CCCHHHHHHHHHHHHHHSCCCCCCCSSEEEEEECCCCSSCCCCCHHHHHHHHHHTTCEEEEEECCCTTTTCS------HH
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCCCCCeeEEcCCCCCCCCccccHHHHHHHHHhCCCCEEEeCCCCCCCccc------HH
Confidence 7899999988742 01 12223312222234555666655 2334578888999999999977667776 67
Q ss_pred chhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecCCCCccee
Q 023717 111 DLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFF 159 (278)
Q Consensus 111 DL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy 159 (278)
|+-| +-|.+-=++....-+.||..|+..+ |..+.+|++.
T Consensus 120 DvLe---------aLG~~~~~~~~~~~~~l~~~g~~fl-~a~~~hPa~k 158 (329)
T 2elc_A 120 DLLE---------ALGVDLEAPPERVGEAIEELGFGFL-FARVFHPAMR 158 (329)
T ss_dssp HHHH---------HTTCCTTCCHHHHHHHHHHHSEEEE-EHHHHCGGGG
T ss_pred HHHH---------hCCCCCCCCHHHHHHHHHHCCEEEE-EhHHhCHHHH
Confidence 7766 3466666888899999999999887 5566777753
No 15
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=72.84 E-value=65 Score=30.50 Aligned_cols=103 Identities=13% Similarity=0.138 Sum_probs=63.0
Q ss_pred hhhhcCCC-eEEEeccc-ccccchhhhHhHhhhCCee---EEeecCCCCcceeecC------------CCCccCcccCCH
Q 023717 112 LTELGRTP-VAVVSAGI-KSILDIPRTLEYLETHGVC---VAAYKTNEFPAFFTET------------SGSKVPCRVDSP 174 (278)
Q Consensus 112 L~eL~rtp-V~VVcaG~-KsILDi~~TLE~LET~GV~---V~gy~t~~fPaFy~~~------------Sg~~~~~r~d~~ 174 (278)
|.+++++. -+.++.|. -++=|+...+||+.+.|-+ ++=-|+..||.|.... +++++ +-|+
T Consensus 242 L~~~a~~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~L~~rG~s~yp~~~~~~ldl~~i~~lk~~~~lpV---~~D~ 318 (385)
T 3nvt_A 242 LKAAGRVDKPILLKRGLSATIEEFIGAAEYIMSQGNGKIILCERGIRTYEKATRNTLDISAVPILKKETHLPV---MVDV 318 (385)
T ss_dssp HHHHHTSSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCE---EEEH
T ss_pred HHHHHccCCcEEEecCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCCCccccCHHHHHHHHHhcCCCE---EEcC
Confidence 44577776 56778998 8899999999999998863 2222477788863221 33333 3344
Q ss_pred HHHH-------HHHHHHHhcCCCCeEEEEeCCCcc------CCCChHHHHHHHHHH
Q 023717 175 EDCA-------RLIDVNMKLKLGSGLVIGVPIPRE------HAASGRVIESAIQSA 217 (278)
Q Consensus 175 ~e~A-------~~~~~~~~l~l~~g~lvanPiP~e------~~~~~~~i~~~i~~A 217 (278)
.... .+-.+.-.+|-.+=++=..|-|+. .+++.+++++.+++-
T Consensus 319 th~~G~r~~v~~~a~AAvA~GA~gl~iE~H~~pd~a~~D~~~sl~p~el~~lv~~i 374 (385)
T 3nvt_A 319 THSTGRKDLLLPCAKAALAIEADGVMAEVHPDPAVALSDSAQQMDIPEFEEFWNAI 374 (385)
T ss_dssp HHHHCCGGGHHHHHHHHHHTTCSEEEEEBCSCGGGCSSCTTTSBCHHHHHHHHHHH
T ss_pred CCCCCccchHHHHHHHHHHhCCCEEEEEecCChhhcCCcccccCCHHHHHHHHHHH
Confidence 3322 344555667754434444465544 456677777777654
No 16
>1brw_A PYNP, protein (pyrimidine nucleoside phosphorylase); domain movement, transferase; HET: MES; 2.10A {Geobacillus stearothermophilus} SCOP: a.46.2.1 c.27.1.1 d.41.3.1
Probab=72.30 E-value=4.6 Score=39.12 Aligned_cols=108 Identities=22% Similarity=0.230 Sum_probs=71.7
Q ss_pred cCCHHHHHHHHhc-CCCccccccc----chHHHHhcCCCchhhHHHHHHHHHHCCCcEEEecccccccCCCccccccccc
Q 023717 37 GLSTEELERLAKL-GSKAQKTARR----DIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSD 111 (278)
Q Consensus 37 Gl~~~el~~la~~-~~~~~K~srR----Dl~~~~a~~~~GaTTVaaTm~lA~~aGI~VFaTGGIGGVHrg~~~t~DiSaD 111 (278)
|+|.+|+..|++. .+...++... ++-..+..|..|..+--.+.+++..+|++|.=.||=|=-|.++ |+|
T Consensus 49 Get~eEiag~a~AM~~~~~~v~~~~~~~~~vD~~gTGGdG~~iSt~~A~vvAa~Gv~VaKHGnRa~ss~~G------saD 122 (433)
T 1brw_A 49 GMTEEETAALTMAMVQSGEMLDLSSIRGVKVDKHSTGGVGDTTTLVLGPLVASVGVPVAKMSGRGLGHTGG------TID 122 (433)
T ss_dssp CCCHHHHHHHHHHHHHTSCCCCCTTSCSCCEEEEECCCSSCCHHHHHHHHHHTTTCCEEEEECCCBTTBCC------HHH
T ss_pred CCCHHHHHHHHHHHHHhCCcCCcccccCCceeeCCCCCCCcchHHHHHHHHHhCCCcEEEECCCCCCCCCC------HHH
Confidence 8999999988742 1111222221 1222334444454433345578889999999999977667776 567
Q ss_pred hhhhcCCCeEEEec-ccccccchhhhHhHhhhCCeeEEeecCCCCccee
Q 023717 112 LTELGRTPVAVVSA-GIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFF 159 (278)
Q Consensus 112 L~eL~rtpV~VVca-G~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy 159 (278)
+-| +- |.+-=|+.....+.|+..|+..++-..+..|++-
T Consensus 123 vLE---------aL~Gv~i~ls~e~~~~~l~~~Gi~fl~a~~~~hPA~k 162 (433)
T 1brw_A 123 KLE---------SVPGFHVEISKDEFIRLVNENGIAIIGQTGDLTPADK 162 (433)
T ss_dssp HHT---------TSTTCCCCCCHHHHHHHHHHHSEEEEECCTTSCHHHH
T ss_pred HHH---------HCcCceecCCHHHHHHHHHHcCeeEecCchhhCHHHH
Confidence 666 32 6666688999999999999999744457888753
No 17
>1uou_A Thymidine phosphorylase; transferase, glycosyltransferase, chemotaxis, angiogenesis; HET: CMU; 2.11A {Homo sapiens} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 PDB: 2wk6_A 2wk5_A 2j0f_A
Probab=71.13 E-value=3.7 Score=40.33 Aligned_cols=106 Identities=23% Similarity=0.247 Sum_probs=72.0
Q ss_pred cCCHHHHHHHHhc-CCCcccccccch-----HHHHhcCCCchhhHHHHHHHHHHCCCcEEEecccccccCCCcccccccc
Q 023717 37 GLSTEELERLAKL-GSKAQKTARRDI-----AHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISS 110 (278)
Q Consensus 37 Gl~~~el~~la~~-~~~~~K~srRDl-----~~~~a~~~~GaTTVaaTm~lA~~aGI~VFaTGGIGGVHrg~~~t~DiSa 110 (278)
|+|.+|+..|++. .+...++...++ -..+..|..|..+--.+.+++..+|++|.=.||=|=-|+++ |+
T Consensus 76 GeT~eEiag~a~AMr~~~~~v~~~~~~~~~~vD~~gTGGdG~~iSt~~A~vvAa~Gv~VaKHGnRa~ss~~G------Sa 149 (474)
T 1uou_A 76 GMDLEETSVLTQALAQSGQQLEWPEAWRQQLVDKHSTGGVGDKVSLVLAPALAACGCKVPMISGRGLGHTGG------TL 149 (474)
T ss_dssp CCCHHHHHHHHHHHHTTSCCCCCCGGGGGGBEEEEESCCTTCCHHHHHHHHHHTTTCBEEEECCCCBTTBCC------HH
T ss_pred CCCHHHHHHHHHHHHHhCCcCCcccccCCCeeEeCCCCCCCceeHHHHHHHHHhCCCCEEEECCCCCCCCCC------HH
Confidence 8999999988752 122223322222 12233444444433344578889999999999988778877 66
Q ss_pred chhhhcCCCeEEEec-ccccccchhhhHhHhhhCCeeEEeec-CCCCcce
Q 023717 111 DLTELGRTPVAVVSA-GIKSILDIPRTLEYLETHGVCVAAYK-TNEFPAF 158 (278)
Q Consensus 111 DL~eL~rtpV~VVca-G~KsILDi~~TLE~LET~GV~V~gy~-t~~fPaF 158 (278)
|+-| +- |.+-=|+.....+.||..|+..+ |. .+..|++
T Consensus 150 DvLE---------aLpGv~i~ls~e~~~~~l~~~Gi~fl-~a~~~~hPA~ 189 (474)
T 1uou_A 150 DKLE---------SIPGFNVIQSPEQMQVLLDQAGCCIV-GQSEQLVPAD 189 (474)
T ss_dssp HHHT---------TSTTCCCCCCHHHHHHHHHHHSEEEE-CCCSSSSHHH
T ss_pred HHHH---------hCCCCCCCCCHHHHHHHHHHcCeEEe-cCchhhCHHH
Confidence 7666 33 66666899999999999999999 55 5778874
No 18
>4hkm_A Anthranilate phosphoribosyltransferase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; HET: MSE CXS; 1.95A {Xanthomonas campestris PV}
Probab=71.00 E-value=2.4 Score=39.55 Aligned_cols=107 Identities=24% Similarity=0.323 Sum_probs=61.4
Q ss_pred cCCHHHHHHHHhc-CCCcccccccc---hHHHHhcCCCchhh--HH-HHHHHHHHCCCcEEEecccccccCCCccccccc
Q 023717 37 GLSTEELERLAKL-GSKAQKTARRD---IAHVVATRGNGATT--VS-ATMFFASMVGIPVFVTGGIGGVHRHGEHTMDIS 109 (278)
Q Consensus 37 Gl~~~el~~la~~-~~~~~K~srRD---l~~~~a~~~~GaTT--Va-aTm~lA~~aGI~VFaTGGIGGVHrg~~~t~DiS 109 (278)
|.|.+|+.-+++. .+...++...| +-..+..+..|.-| || .+.+++..+|++|.-.|+=+=-|+++ |
T Consensus 52 get~eEi~g~~~am~~~~~~v~~~~~~~~vD~~gTGGdg~~t~niSt~~a~v~Aa~G~~V~khG~r~~ss~~G------s 125 (346)
T 4hkm_A 52 KETIGEIAGAATVMREFSRRVEVTDRRHMVDIVGTGGDGSHTFNISTCAMFVAAAGGAKVAKHGNRSVSSKSG------S 125 (346)
T ss_dssp CCCHHHHHHHHHHHHHHSCCCCCSCCTTEEEEECC------CCCHHHHHHHHHHHTTCEEEEEC---------------C
T ss_pred CcCHHHHHHHHHHHHHhCCCCCCCCCccceeecCCCCCCccccCcHHHHHHHHHhcCCCeeecCCCCCCCCcC------H
Confidence 7899999888652 11223333333 22234555666554 33 34567778999999999876667766 5
Q ss_pred cchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecCCCCccee
Q 023717 110 SDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFF 159 (278)
Q Consensus 110 aDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy 159 (278)
+|+-| +-|.+-=|+....-+.|+..|+..+ |.++.+|++.
T Consensus 126 aD~Le---------aLG~~~~ls~~~~~~~l~~~g~~fl-~a~~~~Pa~k 165 (346)
T 4hkm_A 126 ADALE---------ALGAVIELQPEQVAASLAQTGIGFM-YAPVHHPAMK 165 (346)
T ss_dssp HHHHH---------TTTCCCCCCHHHHHHHHHHHSEEEE-CHHHHCGGGG
T ss_pred HHHHH---------HcCCCcccCHHHHHHHHHhcCcchh-chhhhChhHH
Confidence 67666 3466666888999999999998777 5566667654
No 19
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=70.28 E-value=34 Score=31.57 Aligned_cols=158 Identities=15% Similarity=0.162 Sum_probs=95.0
Q ss_pred HHHHHHHHCCCcEEEecc--cccccCCCccccccccc--------hhhhcCCCeEE-EecccccccchhhhHhHhhhCCe
Q 023717 77 ATMFFASMVGIPVFVTGG--IGGVHRHGEHTMDISSD--------LTELGRTPVAV-VSAGIKSILDIPRTLEYLETHGV 145 (278)
Q Consensus 77 aTm~lA~~aGI~VFaTGG--IGGVHrg~~~t~DiSaD--------L~eL~rtpV~V-VcaG~KsILDi~~TLE~LET~GV 145 (278)
.+..++..+|++...+|| ++-++ |-..+--++-| +..-.+.||++ .=.|--+.+++-+|...|+..|+
T Consensus 40 ~sA~l~e~aG~dai~vs~~s~a~~~-G~pD~~~vt~~em~~~~~~I~r~~~~pviaD~d~Gyg~~~~v~~~v~~l~~aGa 118 (305)
T 3ih1_A 40 MAALVARNTGFLALYLSGAAYTASK-GLPDLGIVTSTEVAERARDLVRATDLPVLVDIDTGFGGVLNVARTAVEMVEAKV 118 (305)
T ss_dssp HHHHHHHHTTCSCEEECHHHHHHHH-TCCSSSCSCHHHHHHHHHHHHHHHCCCEEEECTTCSSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCEEEECcHHHHHhC-CCCCCCcCCHHHHHHHHHHHHHhcCCCEEEECCCCCCCHHHHHHHHHHHHHhCC
Confidence 456778889999999886 44343 54444333321 22234567555 33454457889999999999998
Q ss_pred eEEeecCCCCcceeecCCCCccCcccCCHHHHHHHHHHHHhcCCCCeEEEEeCCCccCCCChHHHHHHHHHHHHHHHH--
Q 023717 146 CVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALREARE-- 223 (278)
Q Consensus 146 ~V~gy~t~~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~~~l~l~~g~lvanPiP~e~~~~~~~i~~~i~~Al~ea~~-- 223 (278)
--+-.....+|. .-|+.-...+-+.+|.++-|++-.+.+ ..=+|++.= ++...+.++++|++|.+.++.
T Consensus 119 agv~iED~~~~k----rcGh~~gk~l~~~~e~~~rI~Aa~~A~-~~~~I~ARt----da~~~~g~~~ai~Ra~ay~eAGA 189 (305)
T 3ih1_A 119 AAVQIEDQQLPK----KCGHLNGKKLVTTEELVQKIKAIKEVA-PSLYIVART----DARGVEGLDEAIERANAYVKAGA 189 (305)
T ss_dssp SEEEEECBCSSC----CTTCTTCCCBCCHHHHHHHHHHHHHHC-TTSEEEEEE----CCHHHHCHHHHHHHHHHHHHHTC
T ss_pred cEEEECCCCCCc----ccCCCCCCcccCHHHHHHHHHHHHHcC-CCeEEEEee----ccccccCHHHHHHHHHHHHHcCC
Confidence 777666555543 334433446778888888777666653 334555542 111123478899988776653
Q ss_pred cCC--CCccCChHHHHHHHHHhCC
Q 023717 224 KNI--TGNAETPFLLARVNELTGG 245 (278)
Q Consensus 224 ~gi--~Gk~vTPflL~~i~elT~G 245 (278)
..| .|. -++-..+++.+....
T Consensus 190 D~i~~e~~-~~~~~~~~i~~~~~~ 212 (305)
T 3ih1_A 190 DAIFPEAL-QSEEEFRLFNSKVNA 212 (305)
T ss_dssp SEEEETTC-CSHHHHHHHHHHSCS
T ss_pred CEEEEcCC-CCHHHHHHHHHHcCC
Confidence 222 232 245667777665543
No 20
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=69.29 E-value=2.6 Score=36.02 Aligned_cols=63 Identities=24% Similarity=0.345 Sum_probs=41.3
Q ss_pred HHHHHHHHHHCCCcEEEecccccccCCCccccccccchhhhcCCCe---EEEecccccccchhhhHhHhhhCCeeEE
Q 023717 75 VSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPV---AVVSAGIKSILDIPRTLEYLETHGVCVA 148 (278)
Q Consensus 75 VaaTm~lA~~aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV---~VVcaG~KsILDi~~TLE~LET~GV~V~ 148 (278)
....-.++...+|||++-|||+-. .|+.++-++.+ +|-++=.++-+|+...+++|+.+|++|=
T Consensus 184 ~~~~~~l~~~~~ipvia~GGI~~~-----------~d~~~~~~~Gadgv~vGsal~~~~~~~~~~~~~l~~~g~~~~ 249 (253)
T 1thf_D 184 TEMIRFVRPLTTLPIIASGGAGKM-----------EHFLEAFLAGADAALAASVFHFREIDVRELKEYLKKHGVNVR 249 (253)
T ss_dssp HHHHHHHGGGCCSCEEEESCCCSH-----------HHHHHHHHTTCSEEEESHHHHTTCSCHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHhcCCCEEEECCCCCH-----------HHHHHHHHcCChHHHHHHHHHcCCCCHHHHHHHHHHcCCccc
Confidence 455556666778999999888731 45555544433 3322224455688899999999998873
No 21
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=69.26 E-value=4.1 Score=42.04 Aligned_cols=64 Identities=25% Similarity=0.240 Sum_probs=50.3
Q ss_pred CCcEEEecccccccCCCccccccccchhhhcCCCeEEEeccc-ccccchhhhHhHhhhCCeeEEee
Q 023717 86 GIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGI-KSILDIPRTLEYLETHGVCVAAY 150 (278)
Q Consensus 86 GI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~-KsILDi~~TLE~LET~GV~V~gy 150 (278)
+-++.+-=|-||++-+..... ..+||...-+.||++|..+- -+|-..-.|+|+|+..|++|.|+
T Consensus 201 ~~D~vvVEGaGGl~~p~~~~~-~~adla~~l~~PVILV~d~~lG~i~~~~lt~~~l~~~g~~v~Gv 265 (831)
T 4a0g_A 201 SDLLCLVETAGGVASPGPSGT-LQCDLYRPFRLPGILVGDGRLGGISGTIAAYESLKLRGYDIAAV 265 (831)
T ss_dssp -CEEEEEECCSSTTCBCTTSC-BHHHHTGGGCCCEEEECCCSTTHHHHHHHHHHHHHTTTCCEEEE
T ss_pred cCCEEEEECCCCccCCCCCCc-cHHHHHHHcCCCEEEEECCCCcHHHHHHHHHHHHHHCCCcEEEE
Confidence 567888889999997764432 45899999999999888752 25666778999999999999997
No 22
>3rxy_A NIF3 protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, NIF3 superfamily, unknown function; 2.00A {Sphaerobacter thermophilus}
Probab=68.72 E-value=4 Score=37.80 Aligned_cols=61 Identities=21% Similarity=0.201 Sum_probs=45.2
Q ss_pred HHHHHHHHCCCcEEEecccccccCCCccccccccchh-hhcCC-CeEEEeccc--ccccchhhhHhHhhhCCeeEEee
Q 023717 77 ATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLT-ELGRT-PVAVVSAGI--KSILDIPRTLEYLETHGVCVAAY 150 (278)
Q Consensus 77 aTm~lA~~aGI~VFaTGGIGGVHrg~~~t~DiSaDL~-eL~rt-pV~VVcaG~--KsILDi~~TLE~LET~GV~V~gy 150 (278)
....-|..+|++.|+||=++ .... .+++- .+.||++|= -.-+=+.+-+++||.+||+|+.+
T Consensus 211 ~~i~~a~~~GvDt~ITGe~~-------------~~~~~~~A~E~ginVI~AGHyATEt~Gv~aL~~~Le~~Glevi~~ 275 (278)
T 3rxy_A 211 AVARAYFDHGVRTVLYIHIA-------------PEEAERLRREGGGNLIVTGHIASDLVGINRYVQALEERGVEVVRM 275 (278)
T ss_dssp HHHHHHHHTTCCEEEESCCC-------------HHHHHHHHHHCSSEEEECCHHHHHHHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHcCCCEEEEecCc-------------hHHHHHHHHHcCCeEEEeccchHhHHHHHHHHHHHHHcCCeeecc
Confidence 34667788999999999443 3333 44444 899999983 34566777788999999999864
No 23
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=68.54 E-value=3.5 Score=36.58 Aligned_cols=71 Identities=17% Similarity=0.069 Sum_probs=51.8
Q ss_pred CCCcEEEecccccccCCCccccccccchhhhcCCCeEEEeccc-ccccchhhhHhHhhhCCeeEEeecCCCC
Q 023717 85 VGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGI-KSILDIPRTLEYLETHGVCVAAYKTNEF 155 (278)
Q Consensus 85 aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~-KsILDi~~TLE~LET~GV~V~gy~t~~f 155 (278)
.+-++.+-=|-||.+-+-...-...+|+...-+.||++|...- -+|-+.-.|+|+|+..|++|.|+=-+.|
T Consensus 125 ~~~D~vlIEGagGl~~pl~~~~~~~adla~~l~~pVILV~~~~~g~i~~~~lt~~~l~~~g~~i~GvIlN~v 196 (251)
T 3fgn_A 125 RPGRLTLVEGAGGLLVELAEPGVTLRDVAVDVAAAALVVVTADLGTLNHTKLTLEALAAQQVSCAGLVIGSW 196 (251)
T ss_dssp CTTCEEEEECSSSTTCEEETTTEEHHHHHHHTTCEEEEEECSSTTHHHHHHHHHHHHHHTTCCEEEEEEEEE
T ss_pred hcCCEEEEECCCCCcCCcCcccchHHHHHHHcCCCEEEEEcCCCccHHHHHHHHHHHHhCCCCEEEEEEECC
Confidence 4567888888888875421111255788888899987776543 4777888999999999999999854443
No 24
>3r88_A Anthranilate phosphoribosyltransferase; anthranilic acids, M tryptophan, inhibitor, magnesium binding phosp pyrophosphate; HET: PRP 14F; 1.73A {Mycobacterium tuberculosis} PDB: 3qqs_A 3qs8_A* 3qsa_A* 3qr9_A* 3r6c_A* 3twp_A* 1zvw_A* 2bpq_A
Probab=67.97 E-value=5.1 Score=37.95 Aligned_cols=106 Identities=24% Similarity=0.358 Sum_probs=72.0
Q ss_pred cCCHHHHHHHHhc-CCCcccccc----cchHHHHhcCCCchhh--HH-HHHHHHHHCCCcEEEecccccccCCCcccccc
Q 023717 37 GLSTEELERLAKL-GSKAQKTAR----RDIAHVVATRGNGATT--VS-ATMFFASMVGIPVFVTGGIGGVHRHGEHTMDI 108 (278)
Q Consensus 37 Gl~~~el~~la~~-~~~~~K~sr----RDl~~~~a~~~~GaTT--Va-aTm~lA~~aGI~VFaTGGIGGVHrg~~~t~Di 108 (278)
|.|.+|+.-+++. .+...++.. .+.-..+..+.+|.-| || .+.+++..+|++|.-.|+=+=-|+++
T Consensus 72 Get~eEi~g~~~am~~~~~~v~~~~~~~~~vD~~gTGGdg~~T~niSt~~A~v~Aa~Gv~VaKHGnR~~ss~~G------ 145 (377)
T 3r88_A 72 APTADEVGELAGVMLSHAHPLPADTVPDDAVDVVGTGGDGVNTVNLSTMAAIVVAAAGVPVVKHGNRAASSLSG------ 145 (377)
T ss_dssp CCCHHHHHHHHHHHHHHSCCCCTTCSCTTCEEEEECCCCSCCBCCHHHHHHHHHHHTTCCEEEEECCCSSSSCC------
T ss_pred CcCHHHHHHHHHHHHHhCCcCCCccCCCCCeEEeCCCCCCcCccccHHHHHHHHHhcCCeEEeECCCCCCCccc------
Confidence 7899999888652 111222222 1222345667777755 22 34667788999999999876666765
Q ss_pred ccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecCCCCcce
Q 023717 109 SSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAF 158 (278)
Q Consensus 109 SaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~fPaF 158 (278)
|+|+-| +-|.+-=|+....-+.|+..|+..+ |.+..+|++
T Consensus 146 saDvLE---------aLGv~~~l~~e~~~~~l~~~gi~fl-~a~~~hPa~ 185 (377)
T 3r88_A 146 GADTLE---------ALGVRIDLGPDLVARSLAEVGIGFC-FAPRFHPSY 185 (377)
T ss_dssp HHHHHH---------HTTCCCCCCHHHHHHHHHHHSEEEE-EHHHHCGGG
T ss_pred HHHHHH---------HcCCCcccchHHHHHHHHHhccccc-cchhhCHHH
Confidence 567666 3366666888888999999999888 666777775
No 25
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=66.30 E-value=14 Score=33.89 Aligned_cols=130 Identities=17% Similarity=0.188 Sum_probs=69.4
Q ss_pred ccccccchHHHHhcCC----CchhhHHHHHHHHHHCCCcEEEec-ccccccCCCccccccc-------------------
Q 023717 54 QKTARRDIAHVVATRG----NGATTVSATMFFASMVGIPVFVTG-GIGGVHRHGEHTMDIS------------------- 109 (278)
Q Consensus 54 ~K~srRDl~~~~a~~~----~GaTTVaaTm~lA~~aGI~VFaTG-GIGGVHrg~~~t~DiS------------------- 109 (278)
.|++-++|-....++. -++-. +.+..++..+|+++..|| ++|-+..|-..|.-++
T Consensus 14 ~~~t~~~lr~~~~~g~~i~m~tayD-a~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vtldem~~h~~aV~r~~~~~~ 92 (275)
T 3vav_A 14 PAVTVPKLQAMREAGEKIAMLTCYD-ASFAALLDRANVDVQLIGDSLGNVLQGQTTTLPVTLDDIAYHTACVARAQPRAL 92 (275)
T ss_dssp CCCCHHHHHHHHHHTCCEEEEECCS-HHHHHHHHHTTCSEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHTCCSSE
T ss_pred CCcCHHHHHHHHHCCCcEEEEeCcC-HHHHHHHHHcCCCEEEECcHHHHHHcCCCCCCccCHHHHHHHHHHHHhcCCCCC
Confidence 4566666665555431 12222 456778999999999999 6665666666555444
Q ss_pred --cchhhhc-CCCeE-------EEecccccc-----cchhhhHhHhhhCCeeEEeecCCCCcceeecCCCCccCcccCCH
Q 023717 110 --SDLTELG-RTPVA-------VVSAGIKSI-----LDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSP 174 (278)
Q Consensus 110 --aDL~eL~-rtpV~-------VVcaG~KsI-----LDi~~TLE~LET~GV~V~gy~t~~fPaFy~~~Sg~~~~~r~d~~ 174 (278)
+|+.-.+ .+|-- ++-+|+-.| -..-.|++.|-..||||+|-- .--|.+.....||++..| +.
T Consensus 93 vvaD~pfgsY~s~~~a~~~a~rl~kaGa~aVklEdg~~~~~~i~~l~~~GIpv~gHl-gltPq~~~~~gg~~vqgr--t~ 169 (275)
T 3vav_A 93 IVADLPFGTYGTPADAFASAVKLMRAGAQMVKFEGGEWLAETVRFLVERAVPVCAHV-GLTPQSVHAFGGFKVQGK--TE 169 (275)
T ss_dssp EEEECCTTSCSSHHHHHHHHHHHHHTTCSEEEEECCGGGHHHHHHHHHTTCCEEEEE-ESCGGGHHHHC---CCCC--SH
T ss_pred EEEecCCCCCCCHHHHHHHHHHHHHcCCCEEEECCchhHHHHHHHHHHCCCCEEEec-CCCceEEeccCCeEEEcC--CH
Confidence 2222210 11111 111222222 123456777788889998841 122655555667887765 44
Q ss_pred HHHHHHHHHHHhc
Q 023717 175 EDCARLIDVNMKL 187 (278)
Q Consensus 175 ~e~A~~~~~~~~l 187 (278)
+++.++++.-..+
T Consensus 170 ~~a~~~i~rA~a~ 182 (275)
T 3vav_A 170 AGAAQLLRDARAV 182 (275)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 4556666655444
No 26
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=65.56 E-value=8.1 Score=32.17 Aligned_cols=63 Identities=27% Similarity=0.379 Sum_probs=42.0
Q ss_pred hHHHHHHHHHHCCCcEEEecccccccCCCccccccccchhhhcCC--CeEEEeccc-ccccchhhhHhHhhhCCeeE
Q 023717 74 TVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRT--PVAVVSAGI-KSILDIPRTLEYLETHGVCV 147 (278)
Q Consensus 74 TVaaTm~lA~~aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rt--pV~VVcaG~-KsILDi~~TLE~LET~GV~V 147 (278)
.....-.++....++|++.|||.- ..|+.++.++ ..++|.+.. +.-.++...++||+.+|++|
T Consensus 186 ~~~~i~~l~~~~~~pvia~GGi~~-----------~~~~~~~~~~Ga~~v~vgsal~~~~~~~~~~~~~l~~~g~~~ 251 (253)
T 1h5y_A 186 DVELIRRVADSVRIPVIASGGAGR-----------VEHFYEAAAAGADAVLAASLFHFRVLSIAQVKRYLKERGVEV 251 (253)
T ss_dssp CHHHHHHHHHHCSSCEEEESCCCS-----------HHHHHHHHHTTCSEEEESHHHHTTSSCHHHHHHHHHHTTCBC
T ss_pred CHHHHHHHHHhcCCCEEEeCCCCC-----------HHHHHHHHHcCCcHHHHHHHHHcCCCCHHHHHHHHHHcCCCC
Confidence 344555667778999999988862 1344444443 444444433 33457889999999999986
No 27
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=63.22 E-value=7 Score=33.71 Aligned_cols=68 Identities=22% Similarity=0.292 Sum_probs=50.9
Q ss_pred CCCcEEEecccccccCCCccccccccchhhhcCCCeEEEe-cccccccchhhhHhHhhhCCeeEEeecCC
Q 023717 85 VGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVS-AGIKSILDIPRTLEYLETHGVCVAAYKTN 153 (278)
Q Consensus 85 aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVc-aG~KsILDi~~TLE~LET~GV~V~gy~t~ 153 (278)
.+-++.+-=|-||.+-+-.. -...+|+...-+.||++|. ++-.+|-+.-.|+++|+..|+++.|+=-+
T Consensus 109 ~~~D~vlIEgaggl~~p~~~-~~~~adla~~l~~pviLV~~~~~~~i~~~~~~~~~l~~~~~~i~GvIlN 177 (228)
T 3of5_A 109 QDLDILFIEGAGGLLTPYSD-HTTQLDLIKALQIPVLLVSAIKVGCINHTLLTINELNRHNIKLAGWIAN 177 (228)
T ss_dssp SSCSEEEEEEEEETTCBSSS-SCBHHHHHHHHTCCEEEEEECSTTHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred ccCCEEEEECCCcccccccc-chhHHHHHHHcCCCEEEEEcCCcchHHHHHHHHHHHHhCCCcEEEEEEE
Confidence 46677777788888765321 1245888888889976655 55568999999999999999999998533
No 28
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=60.13 E-value=72 Score=29.03 Aligned_cols=159 Identities=12% Similarity=0.112 Sum_probs=94.5
Q ss_pred HHHHHHHHCCCcEEEecc--cccccCCCccccccccch--------hhhcCCCeEE-EecccccccchhhhHhHhhhCCe
Q 023717 77 ATMFFASMVGIPVFVTGG--IGGVHRHGEHTMDISSDL--------TELGRTPVAV-VSAGIKSILDIPRTLEYLETHGV 145 (278)
Q Consensus 77 aTm~lA~~aGI~VFaTGG--IGGVHrg~~~t~DiSaDL--------~eL~rtpV~V-VcaG~KsILDi~~TLE~LET~GV 145 (278)
.+..++..+|++...+|| ++-+ .|-..+-.++-|- ..-.+.||++ .=.|--+.+++-+|...|+..|+
T Consensus 26 ~sA~~~~~aG~~ai~vs~~~~a~~-~G~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg~~~~~~~~v~~l~~aGa 104 (290)
T 2hjp_A 26 LVAKLAEQAGFGGIWGSGFELSAS-YAVPDANILSMSTHLEMMRAIASTVSIPLIADIDTGFGNAVNVHYVVPQYEAAGA 104 (290)
T ss_dssp HHHHHHHHHTCSEEEECHHHHHHH-TTSCTTTCSCHHHHHHHHHHHHTTCSSCEEEECTTTTSSHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHcCCCEEEEChHHHHHh-CCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCCHHHHHHHHHHHHHhCC
Confidence 456788889999999996 7777 6765554444321 1223467443 23553488899999999999998
Q ss_pred eEEeecCCCCcceeecCCCCcc--CcccCCHHHHHHHHHHHHhcCCCCe-EEEEeCCCccCCCChHHHHHHHHHHHHHHH
Q 023717 146 CVAAYKTNEFPAFFTETSGSKV--PCRVDSPEDCARLIDVNMKLKLGSG-LVIGVPIPREHAASGRVIESAIQSALREAR 222 (278)
Q Consensus 146 ~V~gy~t~~fPaFy~~~Sg~~~--~~r~d~~~e~A~~~~~~~~l~l~~g-~lvanPiP~e~~~~~~~i~~~i~~Al~ea~ 222 (278)
--+-.....+|- .-|+-- ...+-+.+|.++-|++-.+-...++ ++++.= +..+-..-++++|++|.+..+
T Consensus 105 ~gv~iED~~~~k----~cgH~~~~~k~l~p~~e~~~kI~Aa~~a~~~~~~~i~aRt---da~~a~~g~~~ai~Ra~ay~e 177 (290)
T 2hjp_A 105 SAIVMEDKTFPK----DTSLRTDGRQELVRIEEFQGKIAAATAARADRDFVVIARV---EALIAGLGQQEAVRRGQAYEE 177 (290)
T ss_dssp SEEEEECBCSSC----CC-------CCBCCHHHHHHHHHHHHHHCSSTTSEEEEEE---CTTTTTCCHHHHHHHHHHHHH
T ss_pred eEEEEcCCCCCc----cccccccCCCcccCHHHHHHHHHHHHHhcccCCcEEEEee---hHhhccccHHHHHHHHHHHHH
Confidence 777776544431 112111 2356677776666665444433344 555542 111122237888988876554
Q ss_pred HcCC-----CCccCChHHHHHHHHHhC
Q 023717 223 EKNI-----TGNAETPFLLARVNELTG 244 (278)
Q Consensus 223 ~~gi-----~Gk~vTPflL~~i~elT~ 244 (278)
.|. .|+--+|-..++|.+...
T Consensus 178 -AGAd~i~~e~~~~~~~~~~~i~~~~~ 203 (290)
T 2hjp_A 178 -AGADAILIHSRQKTPDEILAFVKSWP 203 (290)
T ss_dssp -TTCSEEEECCCCSSSHHHHHHHHHCC
T ss_pred -cCCcEEEeCCCCCCHHHHHHHHHHcC
Confidence 443 354445677777777665
No 29
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=58.25 E-value=44 Score=30.50 Aligned_cols=156 Identities=19% Similarity=0.204 Sum_probs=96.1
Q ss_pred HHHHHHHHCCCcEEEeccc--ccccCCCccccccccc--------hhhhcCCCeEE-EecccccccchhhhHhHhhhCCe
Q 023717 77 ATMFFASMVGIPVFVTGGI--GGVHRHGEHTMDISSD--------LTELGRTPVAV-VSAGIKSILDIPRTLEYLETHGV 145 (278)
Q Consensus 77 aTm~lA~~aGI~VFaTGGI--GGVHrg~~~t~DiSaD--------L~eL~rtpV~V-VcaG~KsILDi~~TLE~LET~GV 145 (278)
.+..++..+|++...+||- +-+..|-..+-.++-| +..-.+.||++ .=.|--+.+++-+|...|+..|+
T Consensus 32 ~sA~i~e~aGf~ai~vs~s~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~~PviaD~d~Gyg~~~~~~~~v~~l~~aGa 111 (287)
T 3b8i_A 32 MSARIAADLGFECGILGGSVASLQVLAAPDFALITLSEFVEQATRIGRVARLPVIADADHGYGNALNVMRTVVELERAGI 111 (287)
T ss_dssp HHHHHHHHTTCSCEEECHHHHHHHHHSCCSSSCSCHHHHHHHHHHHHTTCSSCEEEECTTCSSSHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHcCCCEEEeCcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCCHHHHHHHHHHHHHhCC
Confidence 4567888899999999965 4355665554444432 11233457543 22453488899999999999998
Q ss_pred eEEeecCCCCcceeecCCCCccCcccCCHHHHHHHHHHHHhcCCCCeE-EEEeCCCccCCCChHHHHHHHHHHHHHHHHc
Q 023717 146 CVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGL-VIGVPIPREHAASGRVIESAIQSALREAREK 224 (278)
Q Consensus 146 ~V~gy~t~~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~~~l~l~~g~-lvanPiP~e~~~~~~~i~~~i~~Al~ea~~~ 224 (278)
--+-.....+|- +-|+... ++-+.+|.++-|++-.+-+..++. +++.= . + -...++++|++|.+..+ .
T Consensus 112 ~gv~iED~~~pK----rcgh~~g-kl~~~~e~~~~I~aa~~a~~~~~~~i~aRt-d---a-a~~gl~~ai~Ra~ay~e-A 180 (287)
T 3b8i_A 112 AALTIEDTLLPA----QFGRKST-DLICVEEGVGKIRAALEARVDPALTIIART-N---A-ELIDVDAVIQRTLAYQE-A 180 (287)
T ss_dssp SEEEEECBCCSC----CTTTCTT-CBCCHHHHHHHHHHHHHHCCSTTSEEEEEE-E---T-TTSCHHHHHHHHHHHHH-T
T ss_pred eEEEEcCCCCcc----ccCCCCC-CccCHHHHHHHHHHHHHcCCCCCcEEEEec-h---h-hhcCHHHHHHHHHHHHH-c
Confidence 777766555543 2244433 388999999999887777765554 44432 1 1 12346888888866544 3
Q ss_pred CCCCc---cC-ChHHHHHHHHHh
Q 023717 225 NITGN---AE-TPFLLARVNELT 243 (278)
Q Consensus 225 gi~Gk---~v-TPflL~~i~elT 243 (278)
|..+= .+ ++-+.++|.+..
T Consensus 181 GAd~i~~e~~~~~~~~~~i~~~~ 203 (287)
T 3b8i_A 181 GADGICLVGVRDFAHLEAIAEHL 203 (287)
T ss_dssp TCSEEEEECCCSHHHHHHHHTTC
T ss_pred CCCEEEecCCCCHHHHHHHHHhC
Confidence 43211 12 356666666544
No 30
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=57.92 E-value=49 Score=27.52 Aligned_cols=104 Identities=17% Similarity=0.138 Sum_probs=54.0
Q ss_pred CCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecCCCCcceeecCCC
Q 023717 85 VGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSG 164 (278)
Q Consensus 85 aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy~~~Sg 164 (278)
.+=.|++|||-||+-+ -+..-|.+. ..-|+..+..+--+....++.++..|..+..+.
T Consensus 12 ~~k~vlITGas~giG~------~ia~~l~~~---G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 69 (256)
T 3ezl_A 12 SQRIAYVTGGMGGIGT------SICQRLHKD---GFRVVAGCGPNSPRRVKWLEDQKALGFDFYASE------------- 69 (256)
T ss_dssp -CEEEEETTTTSHHHH------HHHHHHHHT---TEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEE-------------
T ss_pred CCCEEEEECCCChHHH------HHHHHHHHC---CCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEe-------------
Confidence 3446899999999854 344434333 333333322233344556666666654443332
Q ss_pred CccCcccCCHHHHHHHHHHH-HhcCCCCeEEEEeCC-Cc---cCCCChHHHHHHHH
Q 023717 165 SKVPCRVDSPEDCARLIDVN-MKLKLGSGLVIGVPI-PR---EHAASGRVIESAIQ 215 (278)
Q Consensus 165 ~~~~~r~d~~~e~A~~~~~~-~~l~l~~g~lvanPi-P~---e~~~~~~~i~~~i~ 215 (278)
..+.+++++.+++..- .++| +--+||.|.= .. -..++.+.+++.++
T Consensus 70 ----~Dv~~~~~v~~~~~~~~~~~g-~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 120 (256)
T 3ezl_A 70 ----GNVGDWDSTKQAFDKVKAEVG-EIDVLVNNAGITRDVVFRKMTREDWQAVID 120 (256)
T ss_dssp ----CCTTCHHHHHHHHHHHHHHTC-CEEEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred ----cCCCCHHHHHHHHHHHHHhcC-CCCEEEECCCCCCCCchhhCCHHHHHHHHH
Confidence 2356777777777643 3333 3345666532 11 12456676666543
No 31
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=56.91 E-value=36 Score=31.27 Aligned_cols=105 Identities=22% Similarity=0.226 Sum_probs=52.2
Q ss_pred HHHHHHHHHCCCcEEEecc-cccccCCCccccccccchhh--------hcCCCeEEEe----------------------
Q 023717 76 SATMFFASMVGIPVFVTGG-IGGVHRHGEHTMDISSDLTE--------LGRTPVAVVS---------------------- 124 (278)
Q Consensus 76 aaTm~lA~~aGI~VFaTGG-IGGVHrg~~~t~DiSaDL~e--------L~rtpV~VVc---------------------- 124 (278)
+.+..++..+|+++..+|. +|-+..|-+.|.-++-|-.- =.+.|.+|+=
T Consensus 44 a~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~pfgsy~~s~~~a~~na~rl~~ 123 (281)
T 1oy0_A 44 YSTARIFDEAGIPVLLVGDSAANVVYGYDTTVPISIDELIPLVRGVVRGAPHALVVADLPFGSYEAGPTAALAAATRFLK 123 (281)
T ss_dssp HHHHHHHHTTTCCEEEECTTHHHHTTCCSSSSSCCGGGTHHHHHHHHHHCTTSEEEEECCTTSSTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhcCCCCeEEEECCCCcccCCHHHHHHHHHHHHH
Confidence 3567889999999999984 55577788777666655321 1334555552
Q ss_pred -cccccc-----cchhhhHhHhhhCCeeEEeecCCCCcceeecCCCCccCcccCCHHHHHHHHHHH
Q 023717 125 -AGIKSI-----LDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVN 184 (278)
Q Consensus 125 -aG~KsI-----LDi~~TLE~LET~GV~V~gy~t~~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~ 184 (278)
+|+..| -+.-.+++.|-..|+||+|- -.--|-......||++..|-| ++.++++.-
T Consensus 124 eaGa~aVklEdg~e~~~~I~al~~agIpV~gH-iGLtPqsv~~~ggf~v~grt~---~a~~~i~rA 185 (281)
T 1oy0_A 124 DGGAHAVKLEGGERVAEQIACLTAAGIPVMAH-IGFTPQSVNTLGGFRVQGRGD---AAEQTIADA 185 (281)
T ss_dssp TTCCSEEEEEBSGGGHHHHHHHHHHTCCEEEE-EECCC--------------CH---HHHHHHHHH
T ss_pred HhCCeEEEECCcHHHHHHHHHHHHCCCCEEee-ecCCcceecccCCeEEEeCcH---HHHHHHHHH
Confidence 233332 12344555555668888762 112244444446777776654 344555433
No 32
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=56.60 E-value=20 Score=23.86 Aligned_cols=25 Identities=20% Similarity=0.383 Sum_probs=20.9
Q ss_pred CCcccEEEEEcCceeecCCHHHHHHHH
Q 023717 21 GAVPATIAILEGLPCVGLSTEELERLA 47 (278)
Q Consensus 21 GavPATIaii~G~i~VGl~~~el~~la 47 (278)
+.+|..+ +||+...|.++++|+.+-
T Consensus 49 ~~vP~l~--~~g~~~~g~~~~~l~~~l 73 (75)
T 1r7h_A 49 VQAPVVE--VDGEHWSGFRPERIKQLQ 73 (75)
T ss_dssp BCCCEEE--ETTEEEESCCHHHHHHHH
T ss_pred CccCEEE--ECCeEEcCCCHHHHHHHH
Confidence 4789876 699999999999998764
No 33
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=56.22 E-value=36 Score=29.54 Aligned_cols=105 Identities=18% Similarity=0.296 Sum_probs=56.1
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecCCCCcceeecCC
Q 023717 84 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETS 163 (278)
Q Consensus 84 ~aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy~~~S 163 (278)
+.|=.+++|||-||+-+ -+..-|.+-+ .-|+..+-..--+...+.+.++..|..+..+.
T Consensus 45 l~gk~vlVTGas~GIG~------aia~~la~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~------------ 103 (291)
T 3ijr_A 45 LKGKNVLITGGDSGIGR------AVSIAFAKEG---ANIAIAYLDEEGDANETKQYVEKEGVKCVLLP------------ 103 (291)
T ss_dssp TTTCEEEEETTTSHHHH------HHHHHHHHTT---CEEEEEESSCHHHHHHHHHHHHTTTCCEEEEE------------
T ss_pred CCCCEEEEeCCCcHHHH------HHHHHHHHCC---CEEEEEeCCchHHHHHHHHHHHhcCCcEEEEE------------
Confidence 45667999999999844 3444444433 22333322221123445566676665554332
Q ss_pred CCccCcccCCHHHHHHHHHH-HHhcCCCCeEEEEeC-C----CccCCCChHHHHHHHH
Q 023717 164 GSKVPCRVDSPEDCARLIDV-NMKLKLGSGLVIGVP-I----PREHAASGRVIESAIQ 215 (278)
Q Consensus 164 g~~~~~r~d~~~e~A~~~~~-~~~l~l~~g~lvanP-i----P~e~~~~~~~i~~~i~ 215 (278)
..+.+++++.+++.. ..++| +--+||.|. + ..-..++.+++++.++
T Consensus 104 -----~Dv~d~~~v~~~~~~~~~~~g-~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 155 (291)
T 3ijr_A 104 -----GDLSDEQHCKDIVQETVRQLG-SLNILVNNVAQQYPQQGLEYITAEQLEKTFR 155 (291)
T ss_dssp -----SCTTSHHHHHHHHHHHHHHHS-SCCEEEECCCCCCCCSSGGGCCHHHHHHHHH
T ss_pred -----CCCCCHHHHHHHHHHHHHHcC-CCCEEEECCCCcCCCCCcccCCHHHHHHHHH
Confidence 345677777777763 33344 223466552 1 1223457777776665
No 34
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=54.50 E-value=39 Score=29.50 Aligned_cols=92 Identities=12% Similarity=0.055 Sum_probs=54.9
Q ss_pred chhhhHhHhhhCCeeEEeecCCCCcceeecCCCCc-------cCcccCCHHHHHHHHHHHHhcCCCCeEEEEeCCCccC-
Q 023717 132 DIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSK-------VPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREH- 203 (278)
Q Consensus 132 Di~~TLE~LET~GV~V~gy~t~~fPaFy~~~Sg~~-------~~~r~d~~~e~A~~~~~~~~l~l~~g~lvanPiP~e~- 203 (278)
|+..-.+.|+..|+.+++.....+|.+. .++.+ -..+-+..+..-+.++....||.+. |+..+.|...
T Consensus 60 ~~~~~~~~l~~~GL~v~~~~~~~~~~~~--~~p~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~--v~~~~~~~~~~ 135 (303)
T 3l23_A 60 PMMDFKKMAEDAGLKIISSHVNPVDTSI--SDPFKAMIFKYSKEVTPKIMEYWKATAADHAKLGCKY--LIQPMMPTITT 135 (303)
T ss_dssp EHHHHHHHHHHTTCEEEEEECCCBCTTC--SSTTTTBCCSCCTTTHHHHHHHHHHHHHHHHHTTCSE--EEECSCCCCCS
T ss_pred CHHHHHHHHHHcCCeEEEEecccccccc--cCcccccccccchhhHHHHHHHHHHHHHHHHHcCCCE--EEECCCCCCCC
Confidence 5666778999999999988765444322 11111 0011223556677788888888653 3333444421
Q ss_pred CCChHHHHHHHHHHHHHHHHcCCC
Q 023717 204 AASGRVIESAIQSALREAREKNIT 227 (278)
Q Consensus 204 ~~~~~~i~~~i~~Al~ea~~~gi~ 227 (278)
.-..+.+-+.++++.+.|++.||+
T Consensus 136 ~~~~~~~~~~l~~l~~~a~~~Gv~ 159 (303)
T 3l23_A 136 HDEAKLVCDIFNQASDVIKAEGIA 159 (303)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCc
Confidence 112234456677888899999998
No 35
>2j6v_A UV endonuclease, UVDE; plasmid, TIM barrel, DNA repair, DNA binding protein, lyase; HET: KCX ALY; 1.55A {Thermus thermophilus} PDB: 3bzg_A 3c0s_A* 3c0l_A 3c0q_A* 3bzj_A
Probab=51.94 E-value=16 Score=33.03 Aligned_cols=94 Identities=13% Similarity=0.050 Sum_probs=59.9
Q ss_pred ccchhhhHhHhhhCCeeEEeecCCCCcceeecCCCCccCcccCCHHHHHHHHHHHHhcCCCCeEEEEeCCCccCCCChHH
Q 023717 130 ILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASGRV 209 (278)
Q Consensus 130 ILDi~~TLE~LET~GV~V~gy~t~~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~~~l~l~~g~lvanPiP~e~~~~~~~ 209 (278)
+-|+.+.|+|.+.+|+..+=...+-||-|-...-+.+. .-...+++.++-....+.|+. +++--|-.-..+-++++
T Consensus 60 l~~l~~~l~~~~~~gi~~~ri~s~~f~~ft~~~~~w~~--~~~~~~~~~~~~~~~~~~gi~--i~~H~py~iNL~S~~~e 135 (301)
T 2j6v_A 60 LRDLERILRFNADHGFALFRIGQHLIPFASHPLFPYDW--EGAYEEELARLGALARAFGQR--LSMHPGQYVNPGSPDPE 135 (301)
T ss_dssp HHHHHHHHHHHHHHTCCEEECCGGGSTTTTSTTCCSCH--HHHHHHHHHHHHHHHHHTTCE--EEECCCTTCCTTCSCHH
T ss_pred HHHHHHHHHHHHHcCCCEEEeccCcccccCCCcccCCc--CCCCHHHHHHHHHHHHHcCCe--EEEeCchhhcCCCCCHH
Confidence 46888999999999999888878888876433223222 112346777777777777774 34433433333334433
Q ss_pred HH----HHHHHHHHHHHHcCCC
Q 023717 210 IE----SAIQSALREAREKNIT 227 (278)
Q Consensus 210 i~----~~i~~Al~ea~~~gi~ 227 (278)
+. +.+.+.++-|++-|+.
T Consensus 136 ~re~Si~~l~~~l~~a~~lG~~ 157 (301)
T 2j6v_A 136 VVERSLAELRYSARLLSLLGAE 157 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHHHHHHHHHHcCCC
Confidence 33 4677788888888854
No 36
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=51.87 E-value=31 Score=29.29 Aligned_cols=110 Identities=11% Similarity=-0.001 Sum_probs=62.8
Q ss_pred hhhhHhHhhhCCeeEEeecCCCCcce-eec--------CCCCccCcccCCHHHHHHHHHHHHhcCCCCeEEEEeCCCccC
Q 023717 133 IPRTLEYLETHGVCVAAYKTNEFPAF-FTE--------TSGSKVPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREH 203 (278)
Q Consensus 133 i~~TLE~LET~GV~V~gy~t~~fPaF-y~~--------~Sg~~~~~r~d~~~e~A~~~~~~~~l~l~~g~lvanPiP~e~ 203 (278)
+..-.+.|+..|+.+....+. |++. |.. .+. .-..|-.+.+..-+.++....||.+.=++..-..|+..
T Consensus 53 ~~~~~~~l~~~gl~~~~~~~~-~~g~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~i~~a~~lG~~~v~~~~G~~~~~~ 130 (290)
T 3tva_A 53 AQAFRAKCDAAGIQVTVIFGG-FDGESYADIPTTARTVGLV-PLETRASRVAEMKEISDFASWVGCPAIGLHIGFVPESS 130 (290)
T ss_dssp HHHHHHHHHHTTCEEEEEECC-CTTCCCSSHHHHHHHSSSC-STTTHHHHHHHHHHHHHHHHHHTCSEEEECCCCCCCTT
T ss_pred HHHHHHHHHHcCCEEEEEeec-cCCcccccccccccccCCC-CHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCcccc
Confidence 677788999999999988542 1111 111 110 11123334566777888888888543322222245542
Q ss_pred CCChHHHHHHHHHHHHHHHHcCCC-Cc---cCChHHHHHHHHHhC
Q 023717 204 AASGRVIESAIQSALREAREKNIT-GN---AETPFLLARVNELTG 244 (278)
Q Consensus 204 ~~~~~~i~~~i~~Al~ea~~~gi~-Gk---~vTPflL~~i~elT~ 244 (278)
.-..+.+-+.+++....|++.||+ += .-||.-+.++-+.++
T Consensus 131 ~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~~~~~~~~l~~~~~ 175 (290)
T 3tva_A 131 SPDYSELVRVTQDLLTHAANHGQAVHLETGQESADHLLEFIEDVN 175 (290)
T ss_dssp SHHHHHHHHHHHHHHHHHHTTTCEEEEECCSSCHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHHHHHHHcCCEEEEecCCCCHHHHHHHHHhcC
Confidence 223345566688888899999985 21 235555555555544
No 37
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=51.23 E-value=50 Score=28.02 Aligned_cols=103 Identities=17% Similarity=0.146 Sum_probs=54.7
Q ss_pred CCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecCCCCcceeecCCCC
Q 023717 86 GIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGS 165 (278)
Q Consensus 86 GI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy~~~Sg~ 165 (278)
|=.+++|||-||+-+ -+..-|.+ ...-||.....+--....+.+.++..|..+..+.
T Consensus 4 ~k~vlVTGas~gIG~------aia~~l~~---~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~-------------- 60 (258)
T 3oid_A 4 NKCALVTGSSRGVGK------AAAIRLAE---NGYNIVINYARSKKAALETAEEIEKLGVKVLVVK-------------- 60 (258)
T ss_dssp CCEEEESSCSSHHHH------HHHHHHHH---TTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEE--------------
T ss_pred CCEEEEecCCchHHH------HHHHHHHH---CCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEE--------------
Confidence 456899999999954 34443433 3333333211222234455666666665443322
Q ss_pred ccCcccCCHHHHHHHHHHH-HhcCCCCeEEEEeC----CCccCCCChHHHHHHHH
Q 023717 166 KVPCRVDSPEDCARLIDVN-MKLKLGSGLVIGVP----IPREHAASGRVIESAIQ 215 (278)
Q Consensus 166 ~~~~r~d~~~e~A~~~~~~-~~l~l~~g~lvanP----iP~e~~~~~~~i~~~i~ 215 (278)
.-+.+++++.+++..- .++| +--+||.|. ...-..++.+.+++.++
T Consensus 61 ---~Dv~~~~~v~~~~~~~~~~~g-~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 111 (258)
T 3oid_A 61 ---ANVGQPAKIKEMFQQIDETFG-RLDVFVNNAASGVLRPVMELEETHWDWTMN 111 (258)
T ss_dssp ---CCTTCHHHHHHHHHHHHHHHS-CCCEEEECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred ---cCCCCHHHHHHHHHHHHHHcC-CCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 3456777877777643 3344 223466554 22223567777666554
No 38
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=50.65 E-value=37 Score=28.78 Aligned_cols=106 Identities=11% Similarity=0.111 Sum_probs=57.0
Q ss_pred HHCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecCCCCcceeecC
Q 023717 83 SMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTET 162 (278)
Q Consensus 83 ~~aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy~~~ 162 (278)
.+.|=.+++|||-||+-+ -+..-|.+-+ ..|++++... -=....+.+.|+..|..+..+
T Consensus 5 ~l~~k~vlVTGas~GIG~------aia~~la~~G-~~V~~~~~~~--~~~~~~~~~~~~~~~~~~~~~------------ 63 (259)
T 3edm_A 5 RFTNRTIVVAGAGRDIGR------ACAIRFAQEG-ANVVLTYNGA--AEGAATAVAEIEKLGRSALAI------------ 63 (259)
T ss_dssp TTTTCEEEEETTTSHHHH------HHHHHHHHTT-CEEEEEECSS--CHHHHHHHHHHHTTTSCCEEE------------
T ss_pred CCCCCEEEEECCCchHHH------HHHHHHHHCC-CEEEEEcCCC--HHHHHHHHHHHHhcCCceEEE------------
Confidence 456667999999999944 3444444433 2243332222 122445666676665433221
Q ss_pred CCCccCcccCCHHHHHHHHHHH-HhcCCCCeEEEEeC-C----CccCCCChHHHHHHHH
Q 023717 163 SGSKVPCRVDSPEDCARLIDVN-MKLKLGSGLVIGVP-I----PREHAASGRVIESAIQ 215 (278)
Q Consensus 163 Sg~~~~~r~d~~~e~A~~~~~~-~~l~l~~g~lvanP-i----P~e~~~~~~~i~~~i~ 215 (278)
+.-+.+++++.+++..- .++| +--+||.|. + ..-..++.+.+++.++
T Consensus 64 -----~~Dv~~~~~v~~~~~~~~~~~g-~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 116 (259)
T 3edm_A 64 -----KADLTNAAEVEAAISAAADKFG-EIHGLVHVAGGLIARKTIAEMDEAFWHQVLD 116 (259)
T ss_dssp -----ECCTTCHHHHHHHHHHHHHHHC-SEEEEEECCCCCCCCCCTTTCCHHHHHHHHH
T ss_pred -----EcCCCCHHHHHHHHHHHHHHhC-CCCEEEECCCccCCCCChhhCCHHHHHHHHH
Confidence 23466778877777643 3343 223466553 1 1223567777776655
No 39
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=50.20 E-value=1.1e+02 Score=28.44 Aligned_cols=176 Identities=13% Similarity=0.066 Sum_probs=97.0
Q ss_pred ccchHHHHhcC----CCchhhHHHHHHHHHHCCCcEEEecc--cccccCCCccccccccchh--------hhc-CCCeEE
Q 023717 58 RRDIAHVVATR----GNGATTVSATMFFASMVGIPVFVTGG--IGGVHRHGEHTMDISSDLT--------ELG-RTPVAV 122 (278)
Q Consensus 58 rRDl~~~~a~~----~~GaTTVaaTm~lA~~aGI~VFaTGG--IGGVHrg~~~t~DiSaDL~--------eL~-rtpV~V 122 (278)
+++|-..+..+ .-|+-.. .+..++..+|++...+|| ++-+..|-..+-.++-|-. .-. +.||++
T Consensus 28 ~~~lr~l~~~~~~i~~~~ayD~-~sA~i~e~aGfdai~vs~~~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~~~Pvia 106 (318)
T 1zlp_A 28 KTTMHRLIEEHGSVLMPGVQDA-LSAAVVEKTGFHAAFVSGYSVSAAMLGLPDFGLLTTTEVVEATRRITAAAPNLCVVV 106 (318)
T ss_dssp CCHHHHHHHHSSSEEEEEECSH-HHHHHHHHTTCSEEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHHHSSSSEEEE
T ss_pred HHHHHHHHhCCCcEEEecCCCH-HHHHHHHHcCCCEEEECcHHHhhHhcCCCCCCCCCHHHHHHHHHHHHhhccCCCEEE
Confidence 34455555443 1233333 456788889999999997 6656667655444443211 122 556554
Q ss_pred Ee-cccccccchhhhHhHhhhCCeeEEeecCCCCcceeecCCCCccCcccCCHHHHHHHHHHHHhcC-CCCeEEEEeCCC
Q 023717 123 VS-AGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLK-LGSGLVIGVPIP 200 (278)
Q Consensus 123 Vc-aG~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~~~l~-l~~g~lvanPiP 200 (278)
=. .|--+.+++-+|...|+.-|+--+-.....+|- .-|+--...+-+.++.++-|++-.+-. .++=+|++.=
T Consensus 107 D~d~Gyg~~~~v~~tv~~l~~aGaagv~iED~~~~k----~cgH~~gk~L~p~~e~~~rI~Aa~~A~~~~~~~I~ARt-- 180 (318)
T 1zlp_A 107 DGDTGGGGPLNVQRFIRELISAGAKGVFLEDQVWPK----KCGHMRGKAVVPAEEHALKIAAAREAIGDSDFFLVART-- 180 (318)
T ss_dssp ECTTCSSSHHHHHHHHHHHHHTTCCEEEEECBCSSC----CCSSSSCCCBCCHHHHHHHHHHHHHHHTTSCCEEEEEE--
T ss_pred eCCCCCCCHHHHHHHHHHHHHcCCcEEEECCCCCCc----cccCCCCCccCCHHHHHHHHHHHHHhcccCCcEEEEee--
Confidence 22 343378899999999999998777766544432 112211223566777665555433332 2333455542
Q ss_pred ccCCCChHHHHHHHHHHHHHHHHcCC-----CCccCChHHHHHHHHHhC
Q 023717 201 REHAASGRVIESAIQSALREAREKNI-----TGNAETPFLLARVNELTG 244 (278)
Q Consensus 201 ~e~~~~~~~i~~~i~~Al~ea~~~gi-----~Gk~vTPflL~~i~elT~ 244 (278)
++.-..-++++|++|.+..+ .|. .|- -++-+.++|.+...
T Consensus 181 --da~a~~gl~~ai~Ra~Ay~e-AGAd~i~~e~~-~~~e~~~~i~~~l~ 225 (318)
T 1zlp_A 181 --DARAPHGLEEGIRRANLYKE-AGADATFVEAP-ANVDELKEVSAKTK 225 (318)
T ss_dssp --CTHHHHHHHHHHHHHHHHHH-TTCSEEEECCC-CSHHHHHHHHHHSC
T ss_pred --HHhhhcCHHHHHHHHHHHHH-cCCCEEEEcCC-CCHHHHHHHHHhcC
Confidence 12123456788888766554 332 232 24566666666443
No 40
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=48.95 E-value=57 Score=27.47 Aligned_cols=58 Identities=17% Similarity=0.243 Sum_probs=33.2
Q ss_pred hhHHHHHHHHHHCCCcEEEecccccccCCCccccccccchhhhcCC---CeEEEeccc---ccccchhhhHhHhh
Q 023717 73 TTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRT---PVAVVSAGI---KSILDIPRTLEYLE 141 (278)
Q Consensus 73 TTVaaTm~lA~~aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rt---pV~VVcaG~---KsILDi~~TLE~LE 141 (278)
......-.+++..+|||++-|||.- ..|+.++-+. -+--|..|- +.=+++...++||+
T Consensus 177 ~~~~~~~~i~~~~~ipvia~GGI~~-----------~~d~~~~~~~~~~Gadgv~vG~al~~~~~~~~~~~~~~~ 240 (244)
T 1vzw_A 177 PNLELLKNVCAATDRPVVASGGVSS-----------LDDLRAIAGLVPAGVEGAIVGKALYAKAFTLEEALEATS 240 (244)
T ss_dssp CCHHHHHHHHHTCSSCEEEESCCCS-----------HHHHHHHHTTGGGTEEEEEECHHHHTTSSCHHHHHHHHC
T ss_pred CCHHHHHHHHHhcCCCEEEECCCCC-----------HHHHHHHHhhccCCCceeeeeHHHHcCCCCHHHHHHHhc
Confidence 3456666677777888888877762 1455555554 444444441 22235556666653
No 41
>1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13
Probab=48.81 E-value=44 Score=28.97 Aligned_cols=75 Identities=16% Similarity=0.142 Sum_probs=40.6
Q ss_pred CCeEEEeccccc-ccchhhhHhHhhhCCeeEEeecCCCCcceeecCCCCccCcccCC-HHHHHHHHHHHHhcCCCCeEEE
Q 023717 118 TPVAVVSAGIKS-ILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDS-PEDCARLIDVNMKLKLGSGLVI 195 (278)
Q Consensus 118 tpV~VVcaG~Ks-ILDi~~TLE~LET~GV~V~gy~t~~fPaFy~~~Sg~~~~~r~d~-~~e~A~~~~~~~~l~l~~g~lv 195 (278)
.|++|++-|--. --.-..-.++|-.+|..|+.| ++|+||-++++...+|.+++ .+++..++..-..+++..-.|+
T Consensus 35 ~~~VvllHG~g~~~~~~~~~~~~L~~~G~~Vi~~---D~rGh~G~S~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~lv 111 (305)
T 1tht_A 35 NNTILIASGFARRMDHFAGLAEYLSTNGFHVFRY---DSLHHVGLSSGSIDEFTMTTGKNSLCTVYHWLQTKGTQNIGLI 111 (305)
T ss_dssp SCEEEEECTTCGGGGGGHHHHHHHHTTTCCEEEE---CCCBCC--------CCCHHHHHHHHHHHHHHHHHTTCCCEEEE
T ss_pred CCEEEEecCCccCchHHHHHHHHHHHCCCEEEEe---eCCCCCCCCCCcccceehHHHHHHHHHHHHHHHhCCCCceEEE
Confidence 477777777533 334566789998899999988 67787655555444454433 2344445543333454443333
No 42
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=47.68 E-value=27 Score=30.76 Aligned_cols=138 Identities=17% Similarity=0.189 Sum_probs=69.4
Q ss_pred HHHHHHHHHCCCcEEEecccccc-----cCCCcccccc-----ccchhhhcCC---CeEEEecccccccchhhhHhHhhh
Q 023717 76 SATMFFASMVGIPVFVTGGIGGV-----HRHGEHTMDI-----SSDLTELGRT---PVAVVSAGIKSILDIPRTLEYLET 142 (278)
Q Consensus 76 aaTm~lA~~aGI~VFaTGGIGGV-----Hrg~~~t~Di-----SaDL~eL~rt---pV~VVcaG~KsILDi~~TLE~LET 142 (278)
.+.+.++++.|-+|++|..---= -.|+...+|- -..+.++..- .+++.|+|..+- +...++.|..
T Consensus 178 ~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~~~~~~~v~~~t~g~g~d~~~~~~~~~~~--~~~~~~~l~~ 255 (348)
T 4eez_A 178 LAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGDVNPVDEIKKITGGLGVQSAIVCAVARIA--FEQAVASLKP 255 (348)
T ss_dssp HHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC-CCCHHHHHHHHTTSSCEEEEEECCSCHHH--HHHHHHTEEE
T ss_pred HHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCCCCCHHHHhhhhcCCCCceEEEEeccCcch--hheeheeecC
Confidence 34444555668999998753210 0144444443 3334455432 367778887654 3566777777
Q ss_pred CCeeEEeec--CC----CCcceeecCCCCccCc-ccCCHHHHHHHHHHHHhcCCCCeEEEEeCCCccCCCChHHHHHHHH
Q 023717 143 HGVCVAAYK--TN----EFPAFFTETSGSKVPC-RVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQ 215 (278)
Q Consensus 143 ~GV~V~gy~--t~----~fPaFy~~~Sg~~~~~-r~d~~~e~A~~~~~~~~l~l~~g~lvanPiP~e~~~~~~~i~~~i~ 215 (278)
.|.-|+ ++ .. .++.++.+. +.+-+ ...+.++..++++.-.+=.+ .|+-..+.++ + +.
T Consensus 256 ~G~~v~-~g~~~~~~~~~~~~~~~~~--~~i~gs~~~~~~~~~~~~~l~~~g~i-------~p~~~~~~l~--~----~~ 319 (348)
T 4eez_A 256 MGKMVA-VAVPNTEMTLSVPTVVFDG--VEVAGSLVGTRLDLAEAFQFGAEGKV-------KPIVATRKLE--E----IN 319 (348)
T ss_dssp EEEEEE-CCCCSCEEEECHHHHHHSC--CEEEECCSCCHHHHHHHHHHHHTTSC-------CCCEEEECGG--G----HH
T ss_pred CceEEE-EeccCCCCccCHHHHHhCC--eEEEEEecCCHHHHHHHHHHHHcCCC-------EEEEEEEeHH--H----HH
Confidence 776443 33 11 222333322 22221 12345555555543332222 3444444443 3 45
Q ss_pred HHHHHHHHcCCCCccC
Q 023717 216 SALREAREKNITGNAE 231 (278)
Q Consensus 216 ~Al~ea~~~gi~Gk~v 231 (278)
+|++..++..+.||-|
T Consensus 320 ~A~~~l~~g~~~GKvV 335 (348)
T 4eez_A 320 DIIDEMKAGKIEGRMV 335 (348)
T ss_dssp HHHHHHHTTCCSSEEE
T ss_pred HHHHHHHCCCCccEEE
Confidence 6666777777788854
No 43
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=47.60 E-value=18 Score=32.64 Aligned_cols=44 Identities=11% Similarity=0.042 Sum_probs=24.4
Q ss_pred CCCccCChH-HHHHHHHHhCCccHHHHHHHHHHHHHH------HHHHHHHHHHH
Q 023717 226 ITGNAETPF-LLARVNELTGGLSLASNIALVKNNALI------GAKISVALAQL 272 (278)
Q Consensus 226 i~Gk~vTPf-lL~~i~elT~G~Sl~aNiaLl~nNa~l------aa~IA~~~~~~ 272 (278)
+.-+++||- |.+.|.++-...... .-+.+||+- +.+|+..+-++
T Consensus 304 l~~~~~~~~~L~~~i~~ll~d~~~~---~~m~~~a~~~~~~~aa~~ia~~i~~l 354 (365)
T 3s2u_A 304 LPQKSTGAAELAAQLSEVLMHPETL---RSMADQARSLAKPEATRTVVDACLEV 354 (365)
T ss_dssp CCTTTCCHHHHHHHHHHHHHCTHHH---HHHHHHHHHTCCTTHHHHHHHHHHHH
T ss_pred eecCCCCHHHHHHHHHHHHCCHHHH---HHHHHHHHhcCCccHHHHHHHHHHHH
Confidence 345788884 667888876554432 233444442 44565554443
No 44
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=46.29 E-value=59 Score=27.87 Aligned_cols=102 Identities=15% Similarity=0.227 Sum_probs=55.2
Q ss_pred CCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecCCCCcceeecCCCC
Q 023717 86 GIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGS 165 (278)
Q Consensus 86 GI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy~~~Sg~ 165 (278)
|=.+++|||-||+-+ -+..-|.+-+- .|++++- +-=.+..+.+.|+..|..+..+
T Consensus 24 ~k~~lVTGas~GIG~------aia~~la~~G~-~V~~~~r---~~~~~~~~~~~l~~~~~~~~~~--------------- 78 (279)
T 3sju_A 24 PQTAFVTGVSSGIGL------AVARTLAARGI-AVYGCAR---DAKNVSAAVDGLRAAGHDVDGS--------------- 78 (279)
T ss_dssp -CEEEEESTTSHHHH------HHHHHHHHTTC-EEEEEES---CHHHHHHHHHHHHTTTCCEEEE---------------
T ss_pred CCEEEEeCCCCHHHH------HHHHHHHHCCC-EEEEEeC---CHHHHHHHHHHHHhcCCcEEEE---------------
Confidence 446999999999944 45554544432 2333332 2223456667777766554433
Q ss_pred ccCcccCCHHHHHHHHHHH-HhcCCCCeEEEEeCC----CccCCCChHHHHHHHH
Q 023717 166 KVPCRVDSPEDCARLIDVN-MKLKLGSGLVIGVPI----PREHAASGRVIESAIQ 215 (278)
Q Consensus 166 ~~~~r~d~~~e~A~~~~~~-~~l~l~~g~lvanPi----P~e~~~~~~~i~~~i~ 215 (278)
..-+.+++++.+++..- ..+| +--+||.|.= ..-..++.+.+++.++
T Consensus 79 --~~Dv~d~~~v~~~~~~~~~~~g-~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 130 (279)
T 3sju_A 79 --SCDVTSTDEVHAAVAAAVERFG-PIGILVNSAGRNGGGETADLDDALWADVLD 130 (279)
T ss_dssp --ECCTTCHHHHHHHHHHHHHHHC-SCCEEEECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred --ECCCCCHHHHHHHHHHHHHHcC-CCcEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 23456777777777633 3344 2234665531 1123467777765544
No 45
>1vi6_A 30S ribosomal protein S2P; structural genomics, ribosome; 1.95A {Archaeoglobus fulgidus} SCOP: c.23.15.1 PDB: 1vi5_A
Probab=45.38 E-value=18 Score=31.86 Aligned_cols=75 Identities=17% Similarity=0.212 Sum_probs=47.1
Q ss_pred cccchhhhHhHhhh----------CCeeEEeecCC----------CCcceeecCCCCccCcccCCHHHHHHHHHHHHhcC
Q 023717 129 SILDIPRTLEYLET----------HGVCVAAYKTN----------EFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLK 188 (278)
Q Consensus 129 sILDi~~TLE~LET----------~GV~V~gy~t~----------~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~~~l~ 188 (278)
.|+|+.+|+|+|+. .-|.+||-+.. .+-+||.. +..+|+.+.+.. ..++.
T Consensus 45 hIIdL~kT~~~L~~A~~~i~~i~~~~iLfVgTk~~~~~~V~~~A~~~g~~~v~--~rwlgG~LTN~~--------~~~f~ 114 (208)
T 1vi6_A 45 YVLDIRKLDERIRVAAKFLSRYEPSKILLVAARQYAHKPVQMFSKVVGSDYIV--GRFIPGTLTNPM--------LSEYR 114 (208)
T ss_dssp EEECHHHHHHHHHHHHHHHTTSCGGGEEEEECSGGGHHHHHHHHHHHCCEEEE--SSCCTTTTTCTT--------STTCC
T ss_pred EEEcHHHHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhCCeeec--CEECCCcccChh--------hHhhC
Confidence 69999999999975 44667765421 22234442 233444444432 12356
Q ss_pred CCCeEEEEeCCCccCCCChHHHHHHHHHHHHHHHHcCC
Q 023717 189 LGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNI 226 (278)
Q Consensus 189 l~~g~lvanPiP~e~~~~~~~i~~~i~~Al~ea~~~gi 226 (278)
.|.-++|..|.-+ .+|++||...||
T Consensus 115 ~PdlliV~Dp~~e-------------~~ai~EA~~l~I 139 (208)
T 1vi6_A 115 EPEVVFVNDPAID-------------KQAVSEATAVGI 139 (208)
T ss_dssp CCSEEEESCTTTT-------------HHHHHHHHHTTC
T ss_pred CCCEEEEECCCcc-------------hhHHHHHHHhCC
Confidence 7888888888422 367889998887
No 46
>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}
Probab=44.81 E-value=32 Score=33.25 Aligned_cols=104 Identities=16% Similarity=0.196 Sum_probs=53.2
Q ss_pred cEEEecccccccCCCccccccccchhhhcCCCeEEE-eccccc----------ccchhhhHhHhhhCCeeEEeecCCCCc
Q 023717 88 PVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVV-SAGIKS----------ILDIPRTLEYLETHGVCVAAYKTNEFP 156 (278)
Q Consensus 88 ~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VV-caG~Ks----------ILDi~~TLE~LET~GV~V~gy~t~~fP 156 (278)
.+++|||.||+-+ -+..-|.+-+-..|+++ +--... -=.+...++.|+..|..|.-+.
T Consensus 253 ~vLITGgsgGIG~------~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~----- 321 (525)
T 3qp9_A 253 TVLVTGAEEPAAA------EAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVT----- 321 (525)
T ss_dssp EEEESSTTSHHHH------HHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEE-----
T ss_pred EEEEECCCCcHHH------HHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEE-----
Confidence 4778888888733 45555555444334443 211100 1123456666777776665332
Q ss_pred ceeecCCCCccCcccCCHHHHHHHHHHHHhcCCCCeEEEEe-CCCcc---CCCChHHHHHHHH
Q 023717 157 AFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGLVIGV-PIPRE---HAASGRVIESAIQ 215 (278)
Q Consensus 157 aFy~~~Sg~~~~~r~d~~~e~A~~~~~~~~l~l~~g~lvan-PiP~e---~~~~~~~i~~~i~ 215 (278)
.-+.+++++.+++..-.+++--.+ ||-| -+... ..++.+.+++.++
T Consensus 322 ------------~Dvtd~~~v~~~~~~i~~~g~id~-vVh~AGv~~~~~~~~~~~~~~~~v~~ 371 (525)
T 3qp9_A 322 ------------CDLTDAEAAARLLAGVSDAHPLSA-VLHLPPTVDSEPLAATDADALARVVT 371 (525)
T ss_dssp ------------CCTTSHHHHHHHHHTSCTTSCEEE-EEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred ------------CCCCCHHHHHHHHHHHHhcCCCcE-EEECCcCCCCCchhhCCHHHHHHHHH
Confidence 235678888888775434432233 4433 33222 2456677766554
No 47
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=44.79 E-value=71 Score=26.69 Aligned_cols=100 Identities=17% Similarity=0.228 Sum_probs=51.3
Q ss_pred CCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecCCCCcceeecCCC
Q 023717 85 VGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSG 164 (278)
Q Consensus 85 aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy~~~Sg 164 (278)
.|=.+++|||-||+-+ -+..-|.+-+- .|++++-... ..+.+.|+..|..+..
T Consensus 3 ~~k~vlVTGas~giG~------~ia~~l~~~G~-~V~~~~r~~~-----~~~~~~l~~~~~~~~~--------------- 55 (255)
T 2q2v_A 3 KGKTALVTGSTSGIGL------GIAQVLARAGA-NIVLNGFGDP-----APALAEIARHGVKAVH--------------- 55 (255)
T ss_dssp TTCEEEESSCSSHHHH------HHHHHHHHTTC-EEEEECSSCC-----HHHHHHHHTTSCCEEE---------------
T ss_pred CCCEEEEeCCCcHHHH------HHHHHHHHCCC-EEEEEeCCch-----HHHHHHHHhcCCceEE---------------
Confidence 3556899999999944 34544544332 3444332221 4556666655533221
Q ss_pred CccCcccCCHHHHHHHHHH-HHhcCCCCeEEEEeC-CC---ccCCCChHHHHHHH
Q 023717 165 SKVPCRVDSPEDCARLIDV-NMKLKLGSGLVIGVP-IP---REHAASGRVIESAI 214 (278)
Q Consensus 165 ~~~~~r~d~~~e~A~~~~~-~~~l~l~~g~lvanP-iP---~e~~~~~~~i~~~i 214 (278)
++..+.+++++.+++.. ...+|- --+||.|. +. .-..++.+..++.+
T Consensus 56 --~~~D~~~~~~v~~~~~~~~~~~g~-id~lv~~Ag~~~~~~~~~~~~~~~~~~~ 107 (255)
T 2q2v_A 56 --HPADLSDVAQIEALFALAEREFGG-VDILVNNAGIQHVAPVEQFPLESWDKII 107 (255)
T ss_dssp --ECCCTTSHHHHHHHHHHHHHHHSS-CSEEEECCCCCCCBCGGGCCHHHHHHHH
T ss_pred --EeCCCCCHHHHHHHHHHHHHHcCC-CCEEEECCCCCCCCChhhCCHHHHHHHH
Confidence 12345577777777763 233432 23455542 11 11245666666543
No 48
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=44.68 E-value=63 Score=27.48 Aligned_cols=108 Identities=19% Similarity=0.229 Sum_probs=57.4
Q ss_pred HHCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccc---------cccchhhhHhHhhhCCeeEEeecCC
Q 023717 83 SMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIK---------SILDIPRTLEYLETHGVCVAAYKTN 153 (278)
Q Consensus 83 ~~aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~K---------sILDi~~TLE~LET~GV~V~gy~t~ 153 (278)
.+.|=.+++|||-||+-+ -+..-|.+-+- .|++++--.. +--++..+.+.++..|..+..+.
T Consensus 7 ~l~~k~~lVTGas~gIG~------a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 77 (281)
T 3s55_A 7 DFEGKTALITGGARGMGR------SHAVALAEAGA-DIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAK-- 77 (281)
T ss_dssp TTTTCEEEEETTTSHHHH------HHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEE--
T ss_pred ccCCCEEEEeCCCchHHH------HHHHHHHHCCC-eEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEe--
Confidence 456667999999999944 34444444432 2333332111 12234556666776665544332
Q ss_pred CCcceeecCCCCccCcccCCHHHHHHHHHHH-HhcCCCCeEEEEeCC-C---ccCCCChHHHHHHHH
Q 023717 154 EFPAFFTETSGSKVPCRVDSPEDCARLIDVN-MKLKLGSGLVIGVPI-P---REHAASGRVIESAIQ 215 (278)
Q Consensus 154 ~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~-~~l~l~~g~lvanPi-P---~e~~~~~~~i~~~i~ 215 (278)
.-+.+++++.+++..- ..+| +--+||.|.= . .-..++.+++++.++
T Consensus 78 ---------------~Dv~~~~~v~~~~~~~~~~~g-~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 128 (281)
T 3s55_A 78 ---------------VDVKDRAALESFVAEAEDTLG-GIDIAITNAGISTIALLPEVESAQWDEVIG 128 (281)
T ss_dssp ---------------CCTTCHHHHHHHHHHHHHHHT-CCCEEEECCCCCCCCCTTCCCHHHHHHHHH
T ss_pred ---------------CCCCCHHHHHHHHHHHHHhcC-CCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 3456777777777643 3344 2234555532 1 113467777776544
No 49
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=44.50 E-value=1.4e+02 Score=27.08 Aligned_cols=157 Identities=14% Similarity=0.111 Sum_probs=87.6
Q ss_pred HHHHHHHHCCCcEEEeccc--ccccCCCccccccccch--------hhhcCCCeEE-Eecccc-cccchhhhHhHhhhCC
Q 023717 77 ATMFFASMVGIPVFVTGGI--GGVHRHGEHTMDISSDL--------TELGRTPVAV-VSAGIK-SILDIPRTLEYLETHG 144 (278)
Q Consensus 77 aTm~lA~~aGI~VFaTGGI--GGVHrg~~~t~DiSaDL--------~eL~rtpV~V-VcaG~K-sILDi~~TLE~LET~G 144 (278)
.+..++..+|++...+||- +-+..|-..+-.++-|- ..-.+.||++ .=.|-- +.+++-+|...|+..|
T Consensus 28 ~sA~~~~~aG~~ai~vs~~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg~~~~~~~~~v~~l~~aG 107 (295)
T 1xg4_A 28 NHALLAQRAGYQAIYLSGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVCSLPLLVDADIGFGSSAFNVARTVKSMIKAG 107 (295)
T ss_dssp HHHHHHHHTTCSCEEECHHHHHHTTTCCCSSSCSCHHHHHHHHHHHHHHCCSCEEEECTTCSSSSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCEEEECchHhhhhhcCCCCCCCCCHHHHHHHHHHHHhhCCCCEEecCCcccCCCHHHHHHHHHHHHHcC
Confidence 4567888899999999965 44556766554444331 1234567555 224543 7788999999999999
Q ss_pred eeEEeecCCCCcceeecCCCCccCcccCCHHHHHHHHHHHHhcCCCCe-EEEEeCCCccCCCChHHHHHHHHHHHHHHHH
Q 023717 145 VCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSG-LVIGVPIPREHAASGRVIESAIQSALREARE 223 (278)
Q Consensus 145 V~V~gy~t~~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~~~l~l~~g-~lvanPiP~e~~~~~~~i~~~i~~Al~ea~~ 223 (278)
+--+-.....+|- .-|+--...+-+.++.++-|++-.+-...++ +|++.= . +.-.+-++++|++|.+..+
T Consensus 108 a~gv~iEd~~~~k----~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~aRt-d---a~~~~gl~~ai~ra~ay~e- 178 (295)
T 1xg4_A 108 AAGLHIEDQVGAK----RSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMART-D---ALAVEGLDAAIERAQAYVE- 178 (295)
T ss_dssp CSEEEEECBCSSC----CCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEE-C---CHHHHCHHHHHHHHHHHHH-
T ss_pred CeEEEECCCCCCc----ccCCCCCCccCCHHHHHHHHHHHHHhccCCCcEEEEec-H---HhhhcCHHHHHHHHHHHHH-
Confidence 8877776444322 1122111235566666555554444443333 444432 1 1112345777877765544
Q ss_pred cCC-----CCccCChHHHHHHHHHh
Q 023717 224 KNI-----TGNAETPFLLARVNELT 243 (278)
Q Consensus 224 ~gi-----~Gk~vTPflL~~i~elT 243 (278)
.|. .|. -++-+.++|.+..
T Consensus 179 AGAd~i~~e~~-~~~~~~~~i~~~~ 202 (295)
T 1xg4_A 179 AGAEMLFPEAI-TELAMYRQFADAV 202 (295)
T ss_dssp TTCSEEEETTC-CSHHHHHHHHHHH
T ss_pred cCCCEEEEeCC-CCHHHHHHHHHHc
Confidence 333 232 1345666665544
No 50
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=44.32 E-value=1.1e+02 Score=25.86 Aligned_cols=104 Identities=13% Similarity=0.154 Sum_probs=56.7
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecCCCCcceeecCC
Q 023717 84 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETS 163 (278)
Q Consensus 84 ~aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy~~~S 163 (278)
+.|=.+++|||-||+-+ -+..-|.+-+- .|++++- +-=.+..+.+.|+..|..+..+
T Consensus 9 l~~k~vlVTGas~gIG~------aia~~l~~~G~-~V~~~~r---~~~~~~~~~~~~~~~~~~~~~~------------- 65 (264)
T 3ucx_A 9 LTDKVVVISGVGPALGT------TLARRCAEQGA-DLVLAAR---TVERLEDVAKQVTDTGRRALSV------------- 65 (264)
T ss_dssp TTTCEEEEESCCTTHHH------HHHHHHHHTTC-EEEEEES---CHHHHHHHHHHHHHTTCCEEEE-------------
T ss_pred cCCcEEEEECCCcHHHH------HHHHHHHHCcC-EEEEEeC---CHHHHHHHHHHHHhcCCcEEEE-------------
Confidence 45667999999999854 34444444332 2333332 1123445556666666544322
Q ss_pred CCccCcccCCHHHHHHHHHHH-HhcCCCCeEEEEeC-C-C---ccCCCChHHHHHHHH
Q 023717 164 GSKVPCRVDSPEDCARLIDVN-MKLKLGSGLVIGVP-I-P---REHAASGRVIESAIQ 215 (278)
Q Consensus 164 g~~~~~r~d~~~e~A~~~~~~-~~l~l~~g~lvanP-i-P---~e~~~~~~~i~~~i~ 215 (278)
+.-+.+++++.+++..- .++| +--+||.|. + + .-..++.+.+++.++
T Consensus 66 ----~~Dv~~~~~v~~~~~~~~~~~g-~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 118 (264)
T 3ucx_A 66 ----GTDITDDAQVAHLVDETMKAYG-RVDVVINNAFRVPSMKPFANTTFEHMRDAIE 118 (264)
T ss_dssp ----ECCTTCHHHHHHHHHHHHHHTS-CCSEEEECCCSCCCCCCGGGCCHHHHHHHHH
T ss_pred ----EcCCCCHHHHHHHHHHHHHHcC-CCcEEEECCCCCCCCCCchhCCHHHHHHHHH
Confidence 23466788888877643 3444 333566664 2 1 123566677666544
No 51
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=44.15 E-value=1.2e+02 Score=29.28 Aligned_cols=190 Identities=13% Similarity=0.120 Sum_probs=110.8
Q ss_pred HHHCCCcccEEEEEcCceeecCCHHHHHHHHhcC--CC---cccc-cccchHHHHhcCC-----------CchhhHHHHH
Q 023717 17 VRNNGAVPATIAILEGLPCVGLSTEELERLAKLG--SK---AQKT-ARRDIAHVVATRG-----------NGATTVSATM 79 (278)
Q Consensus 17 vR~~GavPATIaii~G~i~VGl~~~el~~la~~~--~~---~~K~-srRDl~~~~a~~~-----------~GaTTVaaTm 79 (278)
.|..||- .|.++-- -|++++|+.|.+.. -+ ..-+ +..|+..|+..+- +-.+-..-|.
T Consensus 126 a~~~GAD--~ILLi~a----~l~~~~l~~l~~~a~~lgm~~LvEvh~~eE~~~A~~lga~iIGinnr~L~t~~~dl~~~~ 199 (452)
T 1pii_A 126 ARYYQAD--ACLLMLS----VLDDDQYRQLAAVAHSLEMGVLTEVSNEEEQERAIALGAKVVGINNRDLRDLSIDLNRTR 199 (452)
T ss_dssp HHHTTCS--EEEEETT----TCCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHTTCSEEEEESEETTTTEECTHHHH
T ss_pred HHHcCCC--EEEEEcc----cCCHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHCCCCEEEEeCCCCCCCCCCHHHHH
Confidence 6777776 4554433 25566666663311 01 1122 3344555555431 2234467788
Q ss_pred HHHHHC--CCcEEEecccccccCCCccccccccchhhhcC-CCeEEEecccccccchhhhHhHhhhCCeeEEeecC----
Q 023717 80 FFASMV--GIPVFVTGGIGGVHRHGEHTMDISSDLTELGR-TPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKT---- 152 (278)
Q Consensus 80 ~lA~~a--GI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~r-tpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t---- 152 (278)
.++.+. ++.|.+=+||-. ..|+..+.+ ..-++|-++.-.--|+...+.-|-..-+.|+|..+
T Consensus 200 ~L~~~ip~~~~vIaEsGI~t-----------~edv~~~~~~a~avLVGealmr~~d~~~~~~~l~~~~~KICGit~~eda 268 (452)
T 1pii_A 200 ELAPKLGHNVTVISESGINT-----------YAQVRELSHFANGFLIGSALMAHDDLHAAVRRVLLGENKVCGLTRGQDA 268 (452)
T ss_dssp HHHHHHCTTSEEEEESCCCC-----------HHHHHHHTTTCSEEEECHHHHTCSCHHHHHHHHHHCSCEECCCCSHHHH
T ss_pred HHHHhCCCCCeEEEECCCCC-----------HHHHHHHHHhCCEEEEcHHHcCCcCHHHHHHHHHHHhccccCCCcHHHH
Confidence 888876 777887777653 244555444 45567777666667899999999888899999985
Q ss_pred -------CCCcceee-cCCCCccCcccCCHHHHHHHHHHHHhcCCCCeEEEEeCCCccCCCChHHHHHHHHHHHHHHHHc
Q 023717 153 -------NEFPAFFT-ETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALREAREK 224 (278)
Q Consensus 153 -------~~fPaFy~-~~Sg~~~~~r~d~~~e~A~~~~~~~~l~l~~g~lvanPiP~e~~~~~~~i~~~i~~Al~ea~~~ 224 (278)
-++=+|-+ .+|. |.=+++++.+++.. .++..--||.|+ +.++|.+++++.-- .--
T Consensus 269 ~~a~~~Gad~iGfIf~~~Sp-----R~V~~~~a~~i~~~---~~v~~VgVFvn~-------~~~~i~~~~~~~~l--d~v 331 (452)
T 1pii_A 269 KAAYDAGAIYGGLIFVATSP-----RCVNVEQAQEVMAA---APLQYVGVFRNH-------DIADVVDKAKVLSL--AAV 331 (452)
T ss_dssp HHHHHHTCSEEEEECCTTCT-----TBCCHHHHHHHHHH---CCCEEEEEESSC-------CHHHHHHHHHHHTC--SEE
T ss_pred HHHHhcCCCEEEeecCCCCC-----CCCCHHHHHHHHhc---CCCCEEEEEeCC-------CHHHHHHHHHhcCC--CEE
Confidence 37888875 3454 33468888888776 344444566666 34445555443311 111
Q ss_pred CCCCccCChHHHHHHHH
Q 023717 225 NITGNAETPFLLARVNE 241 (278)
Q Consensus 225 gi~Gk~vTPflL~~i~e 241 (278)
.++|.+ +|-..+.+.+
T Consensus 332 QLHG~E-~~~~~~~l~~ 347 (452)
T 1pii_A 332 QLHGNE-EQLYIDTLRE 347 (452)
T ss_dssp EECSCC-CHHHHHHHHH
T ss_pred EECCCC-CHHHHHHHHh
Confidence 225654 5555555544
No 52
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=44.04 E-value=23 Score=31.10 Aligned_cols=69 Identities=14% Similarity=0.040 Sum_probs=52.0
Q ss_pred CCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecc-cccccchhhhHhHhhhCCeeEEeecCCCC
Q 023717 85 VGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAG-IKSILDIPRTLEYLETHGVCVAAYKTNEF 155 (278)
Q Consensus 85 aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG-~KsILDi~~TLE~LET~GV~V~gy~t~~f 155 (278)
..-++.+-=|-||.+-+-.. ....+||...-+.||++|+.. --+|=++-.|+|+|+..|++ .|+==+.|
T Consensus 130 ~~~D~vlIEGagGl~~pl~~-~~~~adlA~~l~~pVILV~~~~lg~i~~~~lt~~~l~~~g~~-~GvIlN~v 199 (242)
T 3qxc_A 130 KTYDLVIVEGAGGLCVPITL-EENMLDFALKLKAKMLLISHDNLGLINDCLLNDFLLKSHQLD-YKIAINLK 199 (242)
T ss_dssp GTCSEEEEECCSCTTCBSSS-SCBHHHHHHHHTCEEEEEECCSTTHHHHHHHHHHHHHTSSSC-EEEEECCC
T ss_pred hcCCEEEEECCCCccccccc-cchHHHHHHHcCCCEEEEEcCCCcHHHHHHHHHHHHHhCCCC-EEEEEeCC
Confidence 46678888899998875321 234578988889998877754 44677889999999999999 99854444
No 53
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=43.87 E-value=79 Score=26.65 Aligned_cols=104 Identities=15% Similarity=0.204 Sum_probs=56.1
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecCCCCcceeecCC
Q 023717 84 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETS 163 (278)
Q Consensus 84 ~aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy~~~S 163 (278)
+.|=.+++|||-||+-+ -+..-|.+-+-. |++++--. -....+.+.++..|..+..+
T Consensus 10 l~~k~vlVTGas~gIG~------~ia~~l~~~G~~-V~~~~r~~---~~~~~~~~~~~~~~~~~~~~------------- 66 (256)
T 3gaf_A 10 LNDAVAIVTGAAAGIGR------AIAGTFAKAGAS-VVVTDLKS---EGAEAVAAAIRQAGGKAIGL------------- 66 (256)
T ss_dssp CTTCEEEECSCSSHHHH------HHHHHHHHHTCE-EEEEESSH---HHHHHHHHHHHHTTCCEEEE-------------
T ss_pred CCCCEEEEECCCCHHHH------HHHHHHHHCCCE-EEEEeCCH---HHHHHHHHHHHhcCCcEEEE-------------
Confidence 34557999999999954 455555544432 43333211 23455566666666544332
Q ss_pred CCccCcccCCHHHHHHHHHHH-HhcCCCCeEEEEeC---CCccCCCChHHHHHHHH
Q 023717 164 GSKVPCRVDSPEDCARLIDVN-MKLKLGSGLVIGVP---IPREHAASGRVIESAIQ 215 (278)
Q Consensus 164 g~~~~~r~d~~~e~A~~~~~~-~~l~l~~g~lvanP---iP~e~~~~~~~i~~~i~ 215 (278)
+.-+.+++++.+++..- .++| +--+||.|. .+..+..+.+.+++.++
T Consensus 67 ----~~Dv~d~~~v~~~~~~~~~~~g-~id~lv~nAg~~~~~~~~~~~~~~~~~~~ 117 (256)
T 3gaf_A 67 ----ECNVTDEQHREAVIKAALDQFG-KITVLVNNAGGGGPKPFDMPMSDFEWAFK 117 (256)
T ss_dssp ----ECCTTCHHHHHHHHHHHHHHHS-CCCEEEECCCCCCCCCTTCCHHHHHHHHH
T ss_pred ----ECCCCCHHHHHHHHHHHHHHcC-CCCEEEECCCCCCCCCCCCCHHHHHHHHH
Confidence 23456777777776633 3333 223456552 22223567777776543
No 54
>3s83_A Ggdef family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, signaling protein; HET: MSE; 1.34A {Caulobacter crescentus} PDB: 3u2e_A
Probab=43.29 E-value=43 Score=28.34 Aligned_cols=80 Identities=20% Similarity=0.262 Sum_probs=48.8
Q ss_pred hHHHHHHHHHHHHHCCCcccEEEEEcCceeecCCHHHHHHHHhcCCCcccccccchHHHHhcCCCchhhHHHHHHHHHHC
Q 023717 6 NFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMV 85 (278)
Q Consensus 6 Nle~A~~~E~~vR~~GavPATIaii~G~i~VGl~~~el~~la~~~~~~~K~srRDl~~~~a~~~~GaTTVaaTm~lA~~a 85 (278)
|.+.+...=+..|+.|. .|++=| .|....-+..|....-+.+|+++.=+... .........+.+...+|+..
T Consensus 137 ~~~~~~~~l~~l~~~G~---~ialDd----fG~g~ssl~~L~~l~~d~iKiD~~~v~~~-~~~~~~~~~~~~i~~~a~~~ 208 (259)
T 3s83_A 137 DPERAAVILKTLRDAGA---GLALDD----FGTGFSSLSYLTRLPFDTLKIDRYFVRTM-GNNAGSAKIVRSVVKLGQDL 208 (259)
T ss_dssp CHHHHHHHHHHHHHHTC---EEEEEC----C---CHHHHHHHHSCCCEEEECHHHHHHT-TTCHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHCCC---EEEEEC----CCCCchhHHHHHhCCCCEEEECHHHHhhh-hcCchHHHHHHHHHHHHHHC
Confidence 33444444455666665 455443 45556677777766557889887433222 22223345688889999999
Q ss_pred CCcEEEec
Q 023717 86 GIPVFVTG 93 (278)
Q Consensus 86 GI~VFaTG 93 (278)
||+|.|.|
T Consensus 209 g~~viaeG 216 (259)
T 3s83_A 209 DLEVVAEG 216 (259)
T ss_dssp TCEEEECC
T ss_pred CCeEEEEe
Confidence 99999875
No 55
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=43.26 E-value=73 Score=30.19 Aligned_cols=87 Identities=18% Similarity=0.112 Sum_probs=44.1
Q ss_pred chhhHHHHHHHHHHCCCcEEEeccccc-----c-cCCC-ccccccccchhhhc---CCCeEEEecccccccchhhhHhHh
Q 023717 71 GATTVSATMFFASMVGIPVFVTGGIGG-----V-HRHG-EHTMDISSDLTELG---RTPVAVVSAGIKSILDIPRTLEYL 140 (278)
Q Consensus 71 GaTTVaaTm~lA~~aGI~VFaTGGIGG-----V-Hrg~-~~t~DiSaDL~eL~---rtpV~VVcaG~KsILDi~~TLE~L 140 (278)
+++|..-. ..+..+|++.+..|+=|| . ..|. ..+++.-.++.+.. +.||+ .+.|..+--|+-+-|.
T Consensus 285 ~~~t~e~a-~~l~~~G~d~I~v~~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~ipvi-a~GGI~~~~di~kala-- 360 (494)
T 1vrd_A 285 NVATPEGT-EALIKAGADAVKVGVGPGSICTTRVVAGVGVPQLTAVMECSEVARKYDVPII-ADGGIRYSGDIVKALA-- 360 (494)
T ss_dssp EECSHHHH-HHHHHTTCSEEEECSSCSTTCHHHHHHCCCCCHHHHHHHHHHHHHTTTCCEE-EESCCCSHHHHHHHHH--
T ss_pred CcCCHHHH-HHHHHcCCCEEEEcCCCCccccccccCCCCccHHHHHHHHHHHHhhcCCCEE-EECCcCCHHHHHHHHH--
Confidence 34555443 455567888777644332 1 1111 11233333333331 33432 2456677777776664
Q ss_pred hhCCeeEEeec-----CCCCcceeecCC
Q 023717 141 ETHGVCVAAYK-----TNEFPAFFTETS 163 (278)
Q Consensus 141 ET~GV~V~gy~-----t~~fPaFy~~~S 163 (278)
.|.-.++.+ +.|+|+=+....
T Consensus 361 --~GAd~V~iGr~~l~~~e~~~~~~~~~ 386 (494)
T 1vrd_A 361 --AGAESVMVGSIFAGTEEAPGETILYQ 386 (494)
T ss_dssp --TTCSEEEESHHHHTBTTSSSEEEEET
T ss_pred --cCCCEEEECHHHhcCCcCCcceEEEC
Confidence 477777765 567876544333
No 56
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=42.90 E-value=61 Score=26.83 Aligned_cols=119 Identities=14% Similarity=0.022 Sum_probs=0.0
Q ss_pred CCCchhHHHHHHHHHHHHHCCCcccEEEEEcCceeecCCHHHHHHHHhcCCCcccccccchHHHHhcCCCchhhHHHHHH
Q 023717 1 MPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMF 80 (278)
Q Consensus 1 lPyP~Nle~A~~~E~~vR~~GavPATIaii~G~i~VGl~~~el~~la~~~~~~~K~srRDl~~~~a~~~~GaTTVaaTm~ 80 (278)
++.|. .....-++++-+..+-.+..+.+ .+.+|..++.+.+-+...++-......-......+......-.
T Consensus 99 ~~~p~-~~~~~~i~~~~~~~~~~~v~~~~--------~t~~e~~~~~~~G~d~i~~~~~g~t~~~~~~~~~~~~~~~~~~ 169 (223)
T 1y0e_A 99 QQRPK-ETLDELVSYIRTHAPNVEIMADI--------ATVEEAKNAARLGFDYIGTTLHGYTSYTQGQLLYQNDFQFLKD 169 (223)
T ss_dssp SCCSS-SCHHHHHHHHHHHCTTSEEEEEC--------SSHHHHHHHHHTTCSEEECTTTTSSTTSTTCCTTHHHHHHHHH
T ss_pred ccCcc-cCHHHHHHHHHHhCCCceEEecC--------CCHHHHHHHHHcCCCEEEeCCCcCcCCCCCCCCCcccHHHHHH
Q ss_pred HHHHCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHh
Q 023717 81 FASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYL 140 (278)
Q Consensus 81 lA~~aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~L 140 (278)
+....+|+|++.|||... .|+.++-+.-+-.|..| .+|++.....+.|
T Consensus 170 ~~~~~~ipvia~GGI~~~-----------~~~~~~~~~Gad~v~vG-~al~~p~~~~~~~ 217 (223)
T 1y0e_A 170 VLQSVDAKVIAEGNVITP-----------DMYKRVMDLGVHCSVVG-GAITRPKEITKRF 217 (223)
T ss_dssp HHHHCCSEEEEESSCCSH-----------HHHHHHHHTTCSEEEEC-HHHHCHHHHHHHH
T ss_pred HHhhCCCCEEEecCCCCH-----------HHHHHHHHcCCCEEEEC-hHHcCcHHHHHHH
No 57
>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*
Probab=42.41 E-value=17 Score=35.16 Aligned_cols=59 Identities=27% Similarity=0.329 Sum_probs=35.6
Q ss_pred cEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecC
Q 023717 88 PVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKT 152 (278)
Q Consensus 88 ~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t 152 (278)
.+++|||.||+-+ -+..-|.+-+-..|++++--..+-=......+.|+..|..|.-+..
T Consensus 241 ~vLITGgsgGIG~------alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~ 299 (496)
T 3mje_A 241 SVLVTGGTGGIGG------RVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAAC 299 (496)
T ss_dssp EEEEETCSSHHHH------HHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEEC
T ss_pred EEEEECCCCchHH------HHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEc
Confidence 4899999999844 4555555544434444443222222345667778888887776654
No 58
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=41.77 E-value=29 Score=28.87 Aligned_cols=91 Identities=16% Similarity=0.256 Sum_probs=53.6
Q ss_pred cchhhhHhHhhhCCeeEEeecCCCCcceeecCCCCccCcccCCHHHHHHHHHHHHhcCCCCeEEEEeCCCccCC---CCh
Q 023717 131 LDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHA---ASG 207 (278)
Q Consensus 131 LDi~~TLE~LET~GV~V~gy~t~~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~~~l~l~~g~lvanPiP~e~~---~~~ 207 (278)
-++....+.|+.+|+.+.++.. ++ ++. +. .-..|-...+..-+.++....||.+.=++..-..|.... -..
T Consensus 45 ~~~~~~~~~l~~~gl~~~~~~~--~~-~~~--~~-d~~~r~~~~~~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~ 118 (275)
T 3qc0_A 45 IGLGEAGRIVRANGLKLTGLCR--GG-FFP--AP-DASGREKAIDDNRRAVDEAAELGADCLVLVAGGLPGGSKNIDAAR 118 (275)
T ss_dssp HCHHHHHHHHHHHTCEESCEEE--EE-CCC--CS-SHHHHHHHHHHHHHHHHHHHHTTCSCEEEECBCCCTTCCCHHHHH
T ss_pred cCHHHHHHHHHHcCCceEEeec--CC-CcC--CC-CHHHHHHHHHHHHHHHHHHHHhCCCEEEEeeCCCCCCCcCHHHHH
Confidence 3677888899999999988764 11 111 10 001122234566777888888887654444333553211 122
Q ss_pred HHHHHHHHHHHHHHHHcCCC
Q 023717 208 RVIESAIQSALREAREKNIT 227 (278)
Q Consensus 208 ~~i~~~i~~Al~ea~~~gi~ 227 (278)
+.+-+.+++....|++.||+
T Consensus 119 ~~~~~~l~~l~~~a~~~gv~ 138 (275)
T 3qc0_A 119 RMVVEGIAAVLPHARAAGVP 138 (275)
T ss_dssp HHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHcCCE
Confidence 34556677788888888985
No 59
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=41.32 E-value=73 Score=28.32 Aligned_cols=87 Identities=17% Similarity=0.183 Sum_probs=53.5
Q ss_pred cccccccchhhhHhHhhh----------C--CeeEEeecCC----------CCcceeecCCCCccCcccCCHHHHHHHHH
Q 023717 125 AGIKSILDIPRTLEYLET----------H--GVCVAAYKTN----------EFPAFFTETSGSKVPCRVDSPEDCARLID 182 (278)
Q Consensus 125 aG~KsILDi~~TLE~LET----------~--GV~V~gy~t~----------~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~ 182 (278)
-|. .|+|+.+|+++|+. + -|.+||-+.. .+-.||.. +..+|+.+.+...+-.-++
T Consensus 36 ngi-hIIdL~kT~~~L~~A~~~i~~~~~~~~~iLfVgTk~~~~~~V~~~A~~~g~~yv~--~rWlgG~LTN~~ti~~~i~ 112 (231)
T 3bbn_B 36 KGI-HIINLTRTARFLSEACDLVFDASSRGKQFLIVGTKNKAADSVARAAIRARCHYVN--KKWLGGMLTNWSTTETRLH 112 (231)
T ss_dssp TTE-EEECHHHHHHHTHHHHHHSHHHHTTTCCEEEECCCTTTHHHHHHHHHHHTCEECC--SSCCSCSSSCHHHHHHHHH
T ss_pred CCc-EEeeHHHHHHHHHHHHHHHHHHHhCCCEEEEEeCcHHHHHHHHHHHHHhCCcccc--ccccCCCCcCHHHHHHHHH
Confidence 344 79999999999853 2 3666665422 23355643 3456777777766432222
Q ss_pred ---------------------------HHHh----cC-------CCCeEEEEeCCCccCCCChHHHHHHHHHHHHHHHHc
Q 023717 183 ---------------------------VNMK----LK-------LGSGLVIGVPIPREHAASGRVIESAIQSALREAREK 224 (278)
Q Consensus 183 ---------------------------~~~~----l~-------l~~g~lvanPiP~e~~~~~~~i~~~i~~Al~ea~~~ 224 (278)
...+ || +|.-++|.+|.-+ .+|++||...
T Consensus 113 ~~~~l~~~~~~g~~~~l~Kke~~~~~r~~~kl~k~lgGik~m~~~Pdll~v~Dp~~e-------------~~ai~EA~~l 179 (231)
T 3bbn_B 113 KFRDLRMEQTAGRLARLPKRDAAVVKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEE-------------YTALRECITL 179 (231)
T ss_dssp HHHHHHHSTTSTTTTTSCHHHHHHHHHHHHHHTTSTTSTTSCCSCCSEEEESCTTTT-------------HHHHHHHHTT
T ss_pred HHHHHHHHHhcCccccCCHHHHHHHHHHHHHHHHhhhcccccccCCCEEEEeCCccc-------------cHHHHHHHHh
Confidence 2222 22 6888888887443 3688899988
Q ss_pred CCC
Q 023717 225 NIT 227 (278)
Q Consensus 225 gi~ 227 (278)
||-
T Consensus 180 ~IP 182 (231)
T 3bbn_B 180 GIP 182 (231)
T ss_dssp TCC
T ss_pred CCC
Confidence 883
No 60
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A
Probab=41.31 E-value=16 Score=29.89 Aligned_cols=65 Identities=18% Similarity=0.187 Sum_probs=41.2
Q ss_pred CCcEEEecccccccCCCccccccccchhhhcCCCeEEEe-cccccccchhhhHhHhhhCCeeEEeec
Q 023717 86 GIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVS-AGIKSILDIPRTLEYLETHGVCVAAYK 151 (278)
Q Consensus 86 GI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVc-aG~KsILDi~~TLE~LET~GV~V~gy~ 151 (278)
.-++..-=|-||.+...... -..+|+......||++|+ ++..++-++-+|++.|+..++++.|+=
T Consensus 108 ~yD~viID~p~~l~~p~~~~-~~~~~l~~~~~~~vi~v~~~~~~~~~~~~~~i~~l~~~~~~i~gvv 173 (224)
T 1byi_A 108 QADWVLVEGAGGWFTPLSDT-FTFADWVTQEQLPVILVVGVKLGCINHAMLTAQVIQHAGLTLAGWV 173 (224)
T ss_dssp TCSEEEEECSSSTTCEEETT-EEHHHHHHHHTCCEEEEEECSTTHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred hCCEEEEEcCCccccCCCcc-hhHHHHHHHhCCCEEEEecCCCCcHHHHHHHHHHHHHCCCcEEEEE
Confidence 44555544445543211000 233555555566866655 677788899999999999999999874
No 61
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=40.99 E-value=87 Score=26.81 Aligned_cols=105 Identities=18% Similarity=0.211 Sum_probs=56.4
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecCCCCcceeecCC
Q 023717 84 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETS 163 (278)
Q Consensus 84 ~aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy~~~S 163 (278)
+.|=.+++|||-||+-+ -+..-|.+- -.-|+..+..+--....+.+.|+..|..+..+
T Consensus 29 l~gk~~lVTGas~GIG~------aia~~la~~---G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~------------- 86 (271)
T 3v2g_A 29 LAGKTAFVTGGSRGIGA------AIAKRLALE---GAAVALTYVNAAERAQAVVSEIEQAGGRAVAI------------- 86 (271)
T ss_dssp CTTCEEEEETTTSHHHH------HHHHHHHHT---TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEE-------------
T ss_pred CCCCEEEEeCCCcHHHH------HHHHHHHHC---CCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEE-------------
Confidence 45667999999999944 344444433 22333322222223445666677766554432
Q ss_pred CCccCcccCCHHHHHHHHHHH-HhcCCCCeEEEEeC-C---CccCCCChHHHHHHHH
Q 023717 164 GSKVPCRVDSPEDCARLIDVN-MKLKLGSGLVIGVP-I---PREHAASGRVIESAIQ 215 (278)
Q Consensus 164 g~~~~~r~d~~~e~A~~~~~~-~~l~l~~g~lvanP-i---P~e~~~~~~~i~~~i~ 215 (278)
+.-+.+++++.+++..- ..+| +--+||.|. + ..-..++.+.+++.++
T Consensus 87 ----~~Dv~d~~~v~~~~~~~~~~~g-~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 138 (271)
T 3v2g_A 87 ----RADNRDAEAIEQAIRETVEALG-GLDILVNSAGIWHSAPLEETTVADFDEVMA 138 (271)
T ss_dssp ----ECCTTCHHHHHHHHHHHHHHHS-CCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred ----ECCCCCHHHHHHHHHHHHHHcC-CCcEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 23456777777777643 3344 233566553 1 1123467777776654
No 62
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=40.25 E-value=1.5e+02 Score=24.26 Aligned_cols=104 Identities=14% Similarity=0.148 Sum_probs=55.0
Q ss_pred CCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecCCCCcceeecCCC
Q 023717 85 VGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSG 164 (278)
Q Consensus 85 aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy~~~Sg 164 (278)
.|=.+++|||-||+-+ .+..-|.+-+ ..|++++-.. -+.....+.++..|..+..+
T Consensus 4 ~~k~vlITGas~gIG~------~~a~~l~~~G-~~v~~~~r~~---~~~~~~~~~~~~~~~~~~~~-------------- 59 (247)
T 3lyl_A 4 NEKVALVTGASRGIGF------EVAHALASKG-ATVVGTATSQ---ASAEKFENSMKEKGFKARGL-------------- 59 (247)
T ss_dssp TTCEEEESSCSSHHHH------HHHHHHHHTT-CEEEEEESSH---HHHHHHHHHHHHTTCCEEEE--------------
T ss_pred CCCEEEEECCCChHHH------HHHHHHHHCC-CEEEEEeCCH---HHHHHHHHHHHhcCCceEEE--------------
Confidence 3556899999999944 4555555543 2243333222 23344555666655444322
Q ss_pred CccCcccCCHHHHHHHHHHHHhcCCCCeEEEEeC-CCc---cCCCChHHHHHHHH
Q 023717 165 SKVPCRVDSPEDCARLIDVNMKLKLGSGLVIGVP-IPR---EHAASGRVIESAIQ 215 (278)
Q Consensus 165 ~~~~~r~d~~~e~A~~~~~~~~l~l~~g~lvanP-iP~---e~~~~~~~i~~~i~ 215 (278)
+..+.+++++.+++..-.+..-+--+||-|. +.. -...+.+.+++.++
T Consensus 60 ---~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 111 (247)
T 3lyl_A 60 ---VLNISDIESIQNFFAEIKAENLAIDILVNNAGITRDNLMMRMSEDEWQSVIN 111 (247)
T ss_dssp ---ECCTTCHHHHHHHHHHHHHTTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred ---EecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHH
Confidence 2345678888887775443322333555553 211 12456666665544
No 63
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=40.24 E-value=1e+02 Score=28.31 Aligned_cols=158 Identities=11% Similarity=0.051 Sum_probs=87.6
Q ss_pred HHHHHHHHCCCcEEEec--ccccccCCCccccccccc-----hhhhc----CCCeEEE-ecccccccchhhhHhHhhhCC
Q 023717 77 ATMFFASMVGIPVFVTG--GIGGVHRHGEHTMDISSD-----LTELG----RTPVAVV-SAGIKSILDIPRTLEYLETHG 144 (278)
Q Consensus 77 aTm~lA~~aGI~VFaTG--GIGGVHrg~~~t~DiSaD-----L~eL~----rtpV~VV-caG~KsILDi~~TLE~LET~G 144 (278)
.+..++..+|++...++ +++-+..|-..+--++-| ...+. +.||++= =.|--+.+++-+|...|+..|
T Consensus 29 ~sA~l~e~aGf~ai~vsG~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~~~PviaD~d~Gyg~~~~v~~tv~~l~~aG 108 (302)
T 3fa4_A 29 LSARVALSAGFDALYMTGAGTAASVHGQADLGICTLNDMRANAEMISNISPSTPVIADADTGYGGPIMVARTTEQYSRSG 108 (302)
T ss_dssp HHHHHHHTTTCSCEEECHHHHHHHHHSCCSSSCCCHHHHHHHHHHHHTTSTTSCEEEECTTTTSSHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCEEEeCcHHHHHHHcCCCCCCcCCHHHHHHHHHHHHhhccCCCEEEECCCCCCCHHHHHHHHHHHHHcC
Confidence 55677889999998764 566666665544333322 22233 4464432 134335678889999999999
Q ss_pred eeEEeecCCCCcceeecCCCCccCcccCCHHHHHHHHHHHHh----cCCCCeEEEEeCCCccCCCChHHHHHHHHHHHHH
Q 023717 145 VCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMK----LKLGSGLVIGVPIPREHAASGRVIESAIQSALRE 220 (278)
Q Consensus 145 V~V~gy~t~~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~~~----l~l~~g~lvanPiP~e~~~~~~~i~~~i~~Al~e 220 (278)
+--+-.....+|- +-|+.-...+-+.+|.++-|++-.+ ++ +.-+|++.= ++.-..-++++|++|-+.
T Consensus 109 aagv~iEDq~~~K----rcgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~-~d~~I~ART----Da~~~~gldeAi~Ra~ay 179 (302)
T 3fa4_A 109 VAAFHIEDQVQTK----RCGHLAGKILVDTDTYVTRIRAAVQARQRIG-SDIVVIART----DSLQTHGYEESVARLRAA 179 (302)
T ss_dssp CCEEEECSBCCC-----------CCCBCCHHHHHHHHHHHHHHHHHHT-CCCEEEEEE----CCHHHHCHHHHHHHHHHH
T ss_pred CcEEEECCCCCCc----ccCCCCCCeecCHHHHHHHHHHHHHHHHhcC-CCEEEEEEe----cccccCCHHHHHHHHHHH
Confidence 8777666555552 2233333456677777665554332 23 445666653 122234577788877665
Q ss_pred HHHcCCCCcc----CChHHHHHHHHHhC
Q 023717 221 AREKNITGNA----ETPFLLARVNELTG 244 (278)
Q Consensus 221 a~~~gi~Gk~----vTPflL~~i~elT~ 244 (278)
++ .|-.+=- -+|--++++.+...
T Consensus 180 ~e-AGAD~ifi~g~~~~~ei~~~~~~~~ 206 (302)
T 3fa4_A 180 RD-AGADVGFLEGITSREMARQVIQDLA 206 (302)
T ss_dssp HT-TTCSEEEETTCCCHHHHHHHHHHTT
T ss_pred HH-cCCCEEeecCCCCHHHHHHHHHHhc
Confidence 43 3443211 24555666655543
No 64
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=39.99 E-value=10 Score=33.83 Aligned_cols=69 Identities=12% Similarity=0.113 Sum_probs=42.4
Q ss_pred HHHHHHHHCCCcEEEeccccccc-----CCCccccccccchhh----hc---CCCeEEEecccccccchhhhHhHhhhCC
Q 023717 77 ATMFFASMVGIPVFVTGGIGGVH-----RHGEHTMDISSDLTE----LG---RTPVAVVSAGIKSILDIPRTLEYLETHG 144 (278)
Q Consensus 77 aTm~lA~~aGI~VFaTGGIGGVH-----rg~~~t~DiSaDL~e----L~---rtpV~VVcaG~KsILDi~~TLE~LET~G 144 (278)
.+..+|+..|.+|++|..----. .|+...+|.+.|+.+ +. .-.+++-|+|.. .+...++.|...|
T Consensus 175 ~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~v~~~~~~~g~Dvvid~~g~~---~~~~~~~~l~~~G 251 (342)
T 4eye_A 175 AAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPLEEGWAKAVREATGGAGVDMVVDPIGGP---AFDDAVRTLASEG 251 (342)
T ss_dssp HHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEESSTTHHHHHHHHTTTSCEEEEEESCC-----CHHHHHHTEEEEE
T ss_pred HHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEecCchhHHHHHHHHhCCCCceEEEECCchh---HHHHHHHhhcCCC
Confidence 45677888999999998632100 044445555544433 32 356888899975 3567888888888
Q ss_pred eeEE
Q 023717 145 VCVA 148 (278)
Q Consensus 145 V~V~ 148 (278)
.-|.
T Consensus 252 ~iv~ 255 (342)
T 4eye_A 252 RLLV 255 (342)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6553
No 65
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=39.73 E-value=1.1e+02 Score=25.41 Aligned_cols=104 Identities=15% Similarity=0.175 Sum_probs=51.9
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecCCCCcceeecCC
Q 023717 84 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETS 163 (278)
Q Consensus 84 ~aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy~~~S 163 (278)
+.|=.+++|||-||+-+ -+..-|.+-+- .|++++--.. .+....+.|+..|..+..+
T Consensus 5 l~~k~~lVTGas~gIG~------aia~~l~~~G~-~V~~~~r~~~---~~~~~~~~l~~~~~~~~~~------------- 61 (247)
T 2jah_A 5 LQGKVALITGASSGIGE------ATARALAAEGA-AVAIAARRVE---KLRALGDELTAAGAKVHVL------------- 61 (247)
T ss_dssp TTTCEEEEESCSSHHHH------HHHHHHHHTTC-EEEEEESCHH---HHHHHHHHHHHTTCCEEEE-------------
T ss_pred CCCCEEEEECCCCHHHH------HHHHHHHHCCC-EEEEEECCHH---HHHHHHHHHHhcCCcEEEE-------------
Confidence 34567999999999944 35554544432 3444332221 1233444555444333222
Q ss_pred CCccCcccCCHHHHHHHHHHH-HhcCCCCeEEEEeC-C---CccCCCChHHHHHHHH
Q 023717 164 GSKVPCRVDSPEDCARLIDVN-MKLKLGSGLVIGVP-I---PREHAASGRVIESAIQ 215 (278)
Q Consensus 164 g~~~~~r~d~~~e~A~~~~~~-~~l~l~~g~lvanP-i---P~e~~~~~~~i~~~i~ 215 (278)
+..+.+++++.+++..- ..+|-- -+||.|. + ..-..++.+.+++.++
T Consensus 62 ----~~Dv~~~~~~~~~~~~~~~~~g~i-d~lv~nAg~~~~~~~~~~~~~~~~~~~~ 113 (247)
T 2jah_A 62 ----ELDVADRQGVDAAVASTVEALGGL-DILVNNAGIMLLGPVEDADTTDWTRMID 113 (247)
T ss_dssp ----ECCTTCHHHHHHHHHHHHHHHSCC-SEEEECCCCCCCCCSTTCCHHHHHHHHH
T ss_pred ----ECCCCCHHHHHHHHHHHHHHcCCC-CEEEECCCCCCCCchhhCCHHHHHHHHH
Confidence 23456777777777643 334322 2455542 1 1112456666665443
No 66
>1o17_A Anthranilate PRT, anthranilate phosphoribosyltransferase, TRPD; nucleoside-phosphorylases; 2.05A {Sulfolobus solfataricus} SCOP: a.46.2.1 c.27.1.1 PDB: 1gxb_A 1zxy_A* 1zyk_A* 2gvq_A* 3gbr_A*
Probab=39.70 E-value=8.3 Score=36.03 Aligned_cols=143 Identities=22% Similarity=0.289 Sum_probs=77.9
Q ss_pred cCCHHHHHHHHhc-CCCcccccccchHHHHhcCCCchhh---HHHHHHHHHHCCCcEEEecccccccCCCccccccccch
Q 023717 37 GLSTEELERLAKL-GSKAQKTARRDIAHVVATRGNGATT---VSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDL 112 (278)
Q Consensus 37 Gl~~~el~~la~~-~~~~~K~srRDl~~~~a~~~~GaTT---VaaTm~lA~~aGI~VFaTGGIGGVHrg~~~t~DiSaDL 112 (278)
|.|.+||.-+++. .+...++...++-..+..|.+|.-| --.+.+++..+ ++|.-.|+=+=-|+++ |+|+
T Consensus 49 get~eEiag~~~am~~~~~~~~~~~~vD~~gTGGdg~~tfNiSt~~A~v~Aa~-v~VaKHGnR~~ss~~G------saDv 121 (345)
T 1o17_A 49 GESKNEIVGFARAMRELAIKIDVPNAIDTAGTGGDGLGTVNVSTASAILLSLV-NPVAKHGNRAVSGKSG------SADV 121 (345)
T ss_dssp CCCHHHHHHHHHHHHHHSCCCCCTTCEECCC----CCCBCCHHHHHHHHHTTT-SCEEEEECCCSSSSCS------HHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCCCceeeCCCCCCCCCccchHHHHHHHHHHc-CCEEEECCCCCCCccc------HHHH
Confidence 7888888877642 0111122111111122334444444 11223455555 8999988877667765 5666
Q ss_pred hhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecCCCCcceee-----cCCCCccCcc----cCCH---------
Q 023717 113 TELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFT-----ETSGSKVPCR----VDSP--------- 174 (278)
Q Consensus 113 ~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy~-----~~Sg~~~~~r----~d~~--------- 174 (278)
-| +-|.+-=++....-+.||..|+..+ |..+.+|++.. +.-|++..++ +-+|
T Consensus 122 LE---------aLGv~~~~~~e~~~~~l~~~gi~fl-~a~~~hPa~k~l~~~R~~lg~rTvfN~lgpL~nPa~~~~ql~G 191 (345)
T 1o17_A 122 LE---------ALGYNIIVPPERAKELVNKTNFVFL-FAQYYHPAMKNVANVRKTLGIRTIFNILGPLTNPANAKYQLMG 191 (345)
T ss_dssp HH---------HHTBCCCCCHHHHHHHHHHHSEEEE-EHHHHCGGGGGTHHHHHHHCSCCGGGGCGGGCCTTCCSEEEEE
T ss_pred HH---------hCCCCCCCCHHHHHHHHHHcCEEEE-ehHHhChHHHHHHHHHHHhCCCCHHHHHHHhcCccCCCeEEEE
Confidence 66 3455555778888888899998877 55667777542 1224444332 2222
Q ss_pred ---HHHHHH-HHHHHhcCCCCeEEEE
Q 023717 175 ---EDCARL-IDVNMKLKLGSGLVIG 196 (278)
Q Consensus 175 ---~e~A~~-~~~~~~l~l~~g~lva 196 (278)
.+..+. ...-..+|.+.+++|.
T Consensus 192 v~~~~~~~~~A~~l~~lG~~~alVv~ 217 (345)
T 1o17_A 192 VFSKDHLDLLSKSAYELDFNKIILVY 217 (345)
T ss_dssp CSSHHHHHHHHHHHTTSCCSEEEEEE
T ss_pred eeCHHHHHHHHHHHHHcCCCeEEEEE
Confidence 333333 3456677887777664
No 67
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=39.38 E-value=49 Score=30.80 Aligned_cols=70 Identities=16% Similarity=0.178 Sum_probs=40.5
Q ss_pred HHHHHHHCCCcEEEeccccccc-CCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecC
Q 023717 78 TMFFASMVGIPVFVTGGIGGVH-RHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKT 152 (278)
Q Consensus 78 Tm~lA~~aGI~VFaTGGIGGVH-rg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t 152 (278)
....+..+|++.+..+|-||-- -++..+++.-.++.+--+.|| +.+-|+.+-.|+-+-|. .|.--++.++
T Consensus 238 ~a~~a~~aGad~I~vs~~gg~~~d~~~~~~~~l~~v~~~~~~pV-ia~GGI~~~~dv~kal~----~GAdaV~iGr 308 (380)
T 1p4c_A 238 DADRCIAEGADGVILSNHGGRQLDCAISPMEVLAQSVAKTGKPV-LIDSGFRRGSDIVKALA----LGAEAVLLGR 308 (380)
T ss_dssp HHHHHHHTTCSEEEECCGGGTSCTTCCCGGGTHHHHHHHHCSCE-EECSSCCSHHHHHHHHH----TTCSCEEESH
T ss_pred HHHHHHHcCCCEEEEcCCCCCcCCCCcCHHHHHHHHHHHcCCeE-EEECCCCCHHHHHHHHH----hCCcHhhehH
Confidence 4555666777777776666521 122234444444444333354 45677777778776554 4888787775
No 68
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=39.30 E-value=2.7e+02 Score=26.87 Aligned_cols=124 Identities=18% Similarity=0.265 Sum_probs=75.9
Q ss_pred HHHHHHHHHHCCCcccEEEEEc--Ccee--ecCCHHHHHHHHhcCCCcccccccchHHHHhcCCCchhhHHHHHHHHHHC
Q 023717 10 AKEVEAIVRNNGAVPATIAILE--GLPC--VGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMV 85 (278)
Q Consensus 10 A~~~E~~vR~~GavPATIaii~--G~i~--VGl~~~el~~la~~~~~~~K~srRDl~~~~a~~~~GaTTVaaTm~lA~~a 85 (278)
+..+-+.+.+.|+.. |+|.| |-+. =|++.++|.++.+... +..+++ +++.++.--++ ..
T Consensus 247 G~~~a~~L~e~Gakv--VavsD~~G~i~dp~Gld~~~l~~~~~~~g-----~i~~y~--------~a~~i~~~ei~--~~ 309 (440)
T 3aog_A 247 GNAAARAFHDHGARV--VAVQDHTGTVYNEAGIDPYDLLRHVQEFG-----GVRGYP--------KAEPLPAADFW--GL 309 (440)
T ss_dssp HHHHHHHHHHTTCEE--EEEECSSCEEECTTCCCHHHHHHHHHHTS-----SSTTCT--------TSEECCHHHHT--TC
T ss_pred HHHHHHHHHHCCCEE--EEEEcCCcEEECCCCCCHHHHHHHHHhcC-----CcccCC--------CceEcCchhhh--cC
Confidence 344445555667664 44443 3321 1777788877765321 112222 23333222222 36
Q ss_pred CCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecCCCCcceeecCCCC
Q 023717 86 GIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGS 165 (278)
Q Consensus 86 GI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy~~~Sg~ 165 (278)
..+||+=|+++++=-+ +--. .| ..-+||-|++-=+. +.--+.|+..||.|+ |.|+...-|+
T Consensus 310 ~~DIlvPcA~~n~i~~-----~na~---~l---~ak~VvEgAN~p~t-~eA~~iL~~~GI~~~-------PD~~aNaGGV 370 (440)
T 3aog_A 310 PVEFLVPAALEKQITE-----QNAW---RI---RARIVAEGANGPTT-PAADDILLEKGVLVV-------PDVIANAGGV 370 (440)
T ss_dssp CCSEEEECSSSSCBCT-----TTGG---GC---CCSEEECCSSSCBC-HHHHHHHHHHTCEEE-------CHHHHTTHHH
T ss_pred CCcEEEecCCcCccch-----hhHH---Hc---CCcEEEecCccccC-HHHHHHHHHCCCEEE-------ChHHHhCCCc
Confidence 7899999999875322 1112 22 56788899988887 677799999999987 9999988887
Q ss_pred ccCc
Q 023717 166 KVPC 169 (278)
Q Consensus 166 ~~~~ 169 (278)
-+.|
T Consensus 371 ~vS~ 374 (440)
T 3aog_A 371 TVSY 374 (440)
T ss_dssp HHHH
T ss_pred eEEE
Confidence 7654
No 69
>4f3h_A Fimxeal, putative uncharacterized protein; fimxeal-C-DI-GMP, type IV pilus, signaling protein; HET: C2E; 2.50A {Xanthomonas campestris PV} PDB: 4f48_A*
Probab=39.18 E-value=41 Score=28.38 Aligned_cols=79 Identities=16% Similarity=0.171 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHHCCCcccEEEEEcCceeecCCHHHHHHHHhcCCCcccccccchHHHHhcCCCchhhHHHHHHHHHHCC
Q 023717 7 FETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVG 86 (278)
Q Consensus 7 le~A~~~E~~vR~~GavPATIaii~G~i~VGl~~~el~~la~~~~~~~K~srRDl~~~~a~~~~GaTTVaaTm~lA~~aG 86 (278)
.+.+...=+..|+.|. .|++=| .|....-+.+|....-+.+|++|.=+.. +.........+.+-..+|+..|
T Consensus 142 ~~~~~~~l~~L~~~G~---~ialDd----fG~g~s~l~~L~~l~~d~iKiD~~~v~~-~~~~~~~~~~l~~i~~~a~~l~ 213 (250)
T 4f3h_A 142 LRNAQQFLASVSAMGC---KVGLEQ----FGSGLDSFQLLAHFQPAFLKLDRSITGD-IASARESQEKIREITSRAQPTG 213 (250)
T ss_dssp HHHHHHHHHHHHTTTC---EEEEEE----ETSSTHHHHHHTTSCCSEEEECHHHHTT-TTTCSHHHHHHHHTHHHHHHHT
T ss_pred HHHHHHHHHHHHHCCC---EEEEeC----CCCCchHHHHHhhCCCCEEEECHHHHHh-HhcChhhHHHHHHHHHHHHHcC
Confidence 3344444455666664 566544 6777788888877555788998632211 1222334566888889999999
Q ss_pred CcEEEec
Q 023717 87 IPVFVTG 93 (278)
Q Consensus 87 I~VFaTG 93 (278)
|+|.|.|
T Consensus 214 ~~viaeG 220 (250)
T 4f3h_A 214 ILTVAEF 220 (250)
T ss_dssp CEEEECC
T ss_pred CEEEEec
Confidence 9999875
No 70
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=39.12 E-value=1.7e+02 Score=26.42 Aligned_cols=85 Identities=19% Similarity=0.209 Sum_probs=54.2
Q ss_pred ccccchhhhHhHhhh------------CCeeEEeecCC----------CCcceeecCCCCccCcccCCHHHHHHHH----
Q 023717 128 KSILDIPRTLEYLET------------HGVCVAAYKTN----------EFPAFFTETSGSKVPCRVDSPEDCARLI---- 181 (278)
Q Consensus 128 KsILDi~~TLE~LET------------~GV~V~gy~t~----------~fPaFy~~~Sg~~~~~r~d~~~e~A~~~---- 181 (278)
-.|+|+.+|+++|+. .-|.+||-+.. .+-.||.. +..+|+.+.+...+-.-+
T Consensus 39 ihIIdL~kT~~~L~~A~~~i~~~a~~gg~iLfVgTk~~a~~~V~~~A~~~g~~yv~--~RWlgG~LTN~~ti~~~i~~l~ 116 (256)
T 2vqe_B 39 IHIIDLQKTMEELERTFRFIEDLAMRGGTILFVGTKKQAQDIVRMEAERAGMPYVN--QRWLGGMLTNFKTISQRVHRLE 116 (256)
T ss_dssp EEEECHHHHHHHHHHHHHHHHHHHTTTCCEEEECCSSSSTTTTTTTTTSSSCCEEC--SCCCTTTTTTHHHHHHHHHHHH
T ss_pred eEEEeHHHHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHHhCCeeec--CeeCCCcccCHHHHHHHHHHHH
Confidence 379999999999853 23667775421 34456653 345677777766542222
Q ss_pred -----------------------HHHHhc-----------CCCCeEEEEeCCCccCCCChHHHHHHHHHHHHHHHHcCCC
Q 023717 182 -----------------------DVNMKL-----------KLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNIT 227 (278)
Q Consensus 182 -----------------------~~~~~l-----------~l~~g~lvanPiP~e~~~~~~~i~~~i~~Al~ea~~~gi~ 227 (278)
+...+| .+|.-++|.+|.-+ .+|++||...||-
T Consensus 117 ~le~~~~~g~f~~l~Kke~~~~~r~~~kL~k~lgGik~m~~~Pdll~V~Dp~~e-------------~~Ai~EA~~l~IP 183 (256)
T 2vqe_B 117 ELEALFASPEIEERPKKEQVRLKHELERLQKYLSGFRLLKRLPDAIFVVDPTKE-------------AIAVREARKLFIP 183 (256)
T ss_dssp HHHHHTTSTTSSCSCHHHHTTHHHHHHHHHHHSTTGGGCSSCCSEEEESCTTTT-------------HHHHHHHHHTTCC
T ss_pred HHHHHhhcCccccccHHHHHHHHHHHHHHHHhhcCccccccCCCEEEEeCCccc-------------hHHHHHHHHcCCC
Confidence 222222 58888888888432 4688899999883
No 71
>1g99_A Acetate kinase; alpha/beta, askha (acetate and sugar kinases, HSC70, actin) superfamily, conserved epsilon conformation; HET: ADP; 2.50A {Methanosarcina thermophila} SCOP: c.55.1.2 c.55.1.2 PDB: 1tuu_A* 1tuy_A*
Probab=39.06 E-value=21 Score=34.47 Aligned_cols=60 Identities=28% Similarity=0.377 Sum_probs=34.8
Q ss_pred cCCHHHHHHHHhcCCCccccc-----ccchHHHHhcCCCchhh--------HHH--HHHHHHHCCCc-EEEecccc
Q 023717 37 GLSTEELERLAKLGSKAQKTA-----RRDIAHVVATRGNGATT--------VSA--TMFFASMVGIP-VFVTGGIG 96 (278)
Q Consensus 37 Gl~~~el~~la~~~~~~~K~s-----rRDl~~~~a~~~~GaTT--------Vaa--Tm~lA~~aGI~-VFaTGGIG 96 (278)
|+|.+|++.+-....+..-+| -|||..+.+.+-.-|.- ++- -.+.|.+-|++ +..|||||
T Consensus 258 ~~s~~ei~~~Lnk~SGLlglsG~s~D~R~l~~~~~~Gd~~A~lA~d~f~yri~k~IGa~~a~LggvDaiVFTgGIG 333 (408)
T 1g99_A 258 GLTTREIDTLMNKKSGVLGVSGLSNDFRDLDEAASKGNRKAELALEIFAYKVKKFIGEYSAVLNGADAVVFTAGIG 333 (408)
T ss_dssp TCCHHHHHHHHHHSCHHHHHHSSCSCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHTTSCSEEEEEHHHH
T ss_pred CCCHHHHHHHHhhcCCceEecCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEEEECcccc
Confidence 567788887765444444333 46776665554322221 111 12456677888 56699999
No 72
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=38.90 E-value=94 Score=28.67 Aligned_cols=10 Identities=10% Similarity=-0.071 Sum_probs=5.8
Q ss_pred CCeeEEeecC
Q 023717 143 HGVCVAAYKT 152 (278)
Q Consensus 143 ~GV~V~gy~t 152 (278)
.|.--++.++
T Consensus 301 ~GAdaV~iGr 310 (370)
T 1gox_A 301 LGAAGVFIGR 310 (370)
T ss_dssp HTCSEEEECH
T ss_pred cCCCEEeecH
Confidence 3666666655
No 73
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=38.05 E-value=30 Score=30.51 Aligned_cols=69 Identities=16% Similarity=0.158 Sum_probs=41.7
Q ss_pred HHHHHHHHCCCcEEEecccccc-----cCCCccccccc-----cchhhhc---CCCeEEEecccccccchhhhHhHhhhC
Q 023717 77 ATMFFASMVGIPVFVTGGIGGV-----HRHGEHTMDIS-----SDLTELG---RTPVAVVSAGIKSILDIPRTLEYLETH 143 (278)
Q Consensus 77 aTm~lA~~aGI~VFaTGGIGGV-----Hrg~~~t~DiS-----aDL~eL~---rtpV~VVcaG~KsILDi~~TLE~LET~ 143 (278)
.+..+|+..|.+|++|..---- ..|+...+|.+ ..+.++. .-.+++-|+|.. -+...++.|...
T Consensus 164 ~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~---~~~~~~~~l~~~ 240 (334)
T 3qwb_A 164 ILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVGKD---TFEISLAALKRK 240 (334)
T ss_dssp HHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHTTTSCEEEEEECCGGG---GHHHHHHHEEEE
T ss_pred HHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEeCCCchHHHHHHHHhCCCCceEEEECCChH---HHHHHHHHhccC
Confidence 4566788899999998752100 01333344432 2334443 356888899973 356778888888
Q ss_pred CeeEE
Q 023717 144 GVCVA 148 (278)
Q Consensus 144 GV~V~ 148 (278)
|.-|.
T Consensus 241 G~iv~ 245 (334)
T 3qwb_A 241 GVFVS 245 (334)
T ss_dssp EEEEE
T ss_pred CEEEE
Confidence 86543
No 74
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=37.96 E-value=55 Score=30.61 Aligned_cols=25 Identities=28% Similarity=0.283 Sum_probs=15.9
Q ss_pred chhhHHHHHHHHHHCC-CcEEEeccc
Q 023717 71 GATTVSATMFFASMVG-IPVFVTGGI 95 (278)
Q Consensus 71 GaTTVaaTm~lA~~aG-I~VFaTGGI 95 (278)
|-.|..+-..++...+ |+|+++|||
T Consensus 251 g~pt~~~l~~v~~~~~~ipvia~GGI 276 (368)
T 3vkj_A 251 GVPTAASIMEVRYSVPDSFLVGSGGI 276 (368)
T ss_dssp SCBHHHHHHHHHHHSTTCEEEEESSC
T ss_pred cccHHHHHHHHHHHcCCCcEEEECCC
Confidence 5556655556666664 777777665
No 75
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=37.65 E-value=1.2e+02 Score=25.52 Aligned_cols=104 Identities=14% Similarity=0.185 Sum_probs=56.4
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecCCCCcceeecCC
Q 023717 84 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETS 163 (278)
Q Consensus 84 ~aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy~~~S 163 (278)
+.|=.|++|||-||+-+ -+..-|.+-+- .|++++- +-=.+..+.+.|+..|..+..+
T Consensus 27 l~~k~vlITGas~gIG~------~la~~l~~~G~-~V~~~~r---~~~~~~~~~~~~~~~~~~~~~~------------- 83 (262)
T 3rkr_A 27 LSGQVAVVTGASRGIGA------AIARKLGSLGA-RVVLTAR---DVEKLRAVEREIVAAGGEAESH------------- 83 (262)
T ss_dssp TTTCEEEESSTTSHHHH------HHHHHHHHTTC-EEEEEES---CHHHHHHHHHHHHHTTCEEEEE-------------
T ss_pred cCCCEEEEECCCChHHH------HHHHHHHHCCC-EEEEEEC---CHHHHHHHHHHHHHhCCceeEE-------------
Confidence 45667999999999954 45544544432 2443332 2223445556666666544332
Q ss_pred CCccCcccCCHHHHHHHHHH-HHhcCCCCeEEEEeC-C----CccCCCChHHHHHHHH
Q 023717 164 GSKVPCRVDSPEDCARLIDV-NMKLKLGSGLVIGVP-I----PREHAASGRVIESAIQ 215 (278)
Q Consensus 164 g~~~~~r~d~~~e~A~~~~~-~~~l~l~~g~lvanP-i----P~e~~~~~~~i~~~i~ 215 (278)
...+.+++++.+++.. ...+|--. +||.|. + ..-..++.+.+++.++
T Consensus 84 ----~~D~~~~~~v~~~~~~~~~~~g~id-~lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 136 (262)
T 3rkr_A 84 ----ACDLSHSDAIAAFATGVLAAHGRCD-VLVNNAGVGWFGGPLHTMKPAEWDALIA 136 (262)
T ss_dssp ----ECCTTCHHHHHHHHHHHHHHHSCCS-EEEECCCCCCCSSCGGGSCHHHHHHHHH
T ss_pred ----EecCCCHHHHHHHHHHHHHhcCCCC-EEEECCCccCCCCCcccCCHHHHHHHHH
Confidence 2346678888777764 33444333 455543 2 1223467777776543
No 76
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=37.63 E-value=1e+02 Score=26.69 Aligned_cols=106 Identities=17% Similarity=0.175 Sum_probs=56.1
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecCCCCcceeecCC
Q 023717 84 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETS 163 (278)
Q Consensus 84 ~aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy~~~S 163 (278)
+.|=.+++|||-||+-+ -+..-|.+-+- .|++++-.. +--+.....+.++..|..+..+
T Consensus 47 l~~k~vlVTGas~GIG~------aia~~la~~G~-~V~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~------------- 105 (294)
T 3r3s_A 47 LKDRKALVTGGDSGIGR------AAAIAYAREGA-DVAINYLPA-EEEDAQQVKALIEECGRKAVLL------------- 105 (294)
T ss_dssp TTTCEEEEETTTSHHHH------HHHHHHHHTTC-EEEEECCGG-GHHHHHHHHHHHHHTTCCEEEC-------------
T ss_pred CCCCEEEEeCCCcHHHH------HHHHHHHHCCC-EEEEEeCCc-chhHHHHHHHHHHHcCCcEEEE-------------
Confidence 45677999999999944 34444444332 233322211 1122344455566666544322
Q ss_pred CCccCcccCCHHHHHHHHHH-HHhcCCCCeEEEEeC-----CCccCCCChHHHHHHHH
Q 023717 164 GSKVPCRVDSPEDCARLIDV-NMKLKLGSGLVIGVP-----IPREHAASGRVIESAIQ 215 (278)
Q Consensus 164 g~~~~~r~d~~~e~A~~~~~-~~~l~l~~g~lvanP-----iP~e~~~~~~~i~~~i~ 215 (278)
+..+.+++++.+++.. ...+|- --+||.|. .+.-..++.+.+++.++
T Consensus 106 ----~~Dv~d~~~v~~~~~~~~~~~g~-iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 158 (294)
T 3r3s_A 106 ----PGDLSDESFARSLVHKAREALGG-LDILALVAGKQTAIPEIKDLTSEQFQQTFA 158 (294)
T ss_dssp ----CCCTTSHHHHHHHHHHHHHHHTC-CCEEEECCCCCCCCSSGGGCCHHHHHHHHH
T ss_pred ----EecCCCHHHHHHHHHHHHHHcCC-CCEEEECCCCcCCCCCcccCCHHHHHHHHH
Confidence 3345677787777764 333442 23455543 12233567777777665
No 77
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=37.61 E-value=31 Score=33.79 Aligned_cols=68 Identities=21% Similarity=0.232 Sum_probs=45.1
Q ss_pred chhhHHHHHHHHHHCCCcEEEecccccccCCCccccccccchhhhcC-C--CeEEEecc-cccccchhhhHhHhhhCCee
Q 023717 71 GATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGR-T--PVAVVSAG-IKSILDIPRTLEYLETHGVC 146 (278)
Q Consensus 71 GaTTVaaTm~lA~~aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~r-t--pV~VVcaG-~KsILDi~~TLE~LET~GV~ 146 (278)
.|.....+-.++....|||+|.||++-. .|+.++-+ + .-++|.++ -..-+++....+||...|++
T Consensus 481 ~G~d~~li~~l~~~~~iPVIasGGi~s~-----------~d~~~~~~~~G~~gvivg~a~~~~~~~~~e~~~~l~~~gi~ 549 (555)
T 1jvn_A 481 SGYDLELIEHVKDAVKIPVIASSGAGVP-----------EHFEEAFLKTRADACLGAGMFHRGEFTVNDVKEYLLEHGLK 549 (555)
T ss_dssp SCCCHHHHHHHHHHCSSCEEECSCCCSH-----------HHHHHHHHHSCCSEEEESHHHHTTSCCHHHHHHHHHHTTCC
T ss_pred CCCCHHHHHHHHHhCCccEEEECCCCCH-----------HHHHHHHHhcCChHHHHHHHHHcCCCCHHHHHHHHHHCCCc
Confidence 3456777778888899999999988842 34555443 3 33333332 22345778888899999998
Q ss_pred EEe
Q 023717 147 VAA 149 (278)
Q Consensus 147 V~g 149 (278)
|=-
T Consensus 550 ~r~ 552 (555)
T 1jvn_A 550 VRM 552 (555)
T ss_dssp CCC
T ss_pred ccc
Confidence 743
No 78
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=37.44 E-value=1.1e+02 Score=26.84 Aligned_cols=108 Identities=20% Similarity=0.199 Sum_probs=57.6
Q ss_pred HHCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecc-------cccccchhhhHhHhhhCCeeEEeecCCCC
Q 023717 83 SMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAG-------IKSILDIPRTLEYLETHGVCVAAYKTNEF 155 (278)
Q Consensus 83 ~~aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG-------~KsILDi~~TLE~LET~GV~V~gy~t~~f 155 (278)
.+.|=.|++|||-||+-+ -+..-|.+-+ ..|++++-. ..+--....+.+.++..|..+..+.
T Consensus 24 ~l~gk~vlVTGas~GIG~------aia~~la~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 92 (322)
T 3qlj_A 24 VVDGRVVIVTGAGGGIGR------AHALAFAAEG-ARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADG---- 92 (322)
T ss_dssp TTTTCEEEETTTTSHHHH------HHHHHHHHTT-CEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEEC----
T ss_pred ccCCCEEEEECCCcHHHH------HHHHHHHHCC-CEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEE----
Confidence 355667999999999944 3444444433 233333221 1112234566777777776655433
Q ss_pred cceeecCCCCccCcccCCHHHHHHHHHHH-HhcCCCCeEEEEeC-CCc---cCCCChHHHHHHHH
Q 023717 156 PAFFTETSGSKVPCRVDSPEDCARLIDVN-MKLKLGSGLVIGVP-IPR---EHAASGRVIESAIQ 215 (278)
Q Consensus 156 PaFy~~~Sg~~~~~r~d~~~e~A~~~~~~-~~l~l~~g~lvanP-iP~---e~~~~~~~i~~~i~ 215 (278)
..+.+++++.+++..- .++|- --+||.|. +.. -..++.+++++.++
T Consensus 93 -------------~Dv~d~~~v~~~~~~~~~~~g~-iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 143 (322)
T 3qlj_A 93 -------------SNVADWDQAAGLIQTAVETFGG-LDVLVNNAGIVRDRMIANTSEEEFDAVIA 143 (322)
T ss_dssp -------------CCTTSHHHHHHHHHHHHHHHSC-CCEEECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred -------------CCCCCHHHHHHHHHHHHHHcCC-CCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 2356777777777643 33332 22455543 111 12456666666554
No 79
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=37.31 E-value=96 Score=26.07 Aligned_cols=104 Identities=17% Similarity=0.231 Sum_probs=52.1
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecCCCCcceeecCC
Q 023717 84 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETS 163 (278)
Q Consensus 84 ~aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy~~~S 163 (278)
+.|=.+++|||-||+-+ -+..-|.+-+ ..|++++--. =.+..+.+.|+..|..+..+
T Consensus 5 l~~k~vlVTGas~gIG~------~ia~~l~~~G-~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~------------- 61 (262)
T 1zem_A 5 FNGKVCLVTGAGGNIGL------ATALRLAEEG-TAIALLDMNR---EALEKAEASVREKGVEARSY------------- 61 (262)
T ss_dssp TTTCEEEEETTTSHHHH------HHHHHHHHTT-CEEEEEESCH---HHHHHHHHHHHTTTSCEEEE-------------
T ss_pred cCCCEEEEeCCCcHHHH------HHHHHHHHCC-CEEEEEeCCH---HHHHHHHHHHHhcCCcEEEE-------------
Confidence 34667999999999944 3444444433 2233333211 12334445555544333222
Q ss_pred CCccCcccCCHHHHHHHHHHH-HhcCCCCeEEEEeC-----CCccCCCChHHHHHHHH
Q 023717 164 GSKVPCRVDSPEDCARLIDVN-MKLKLGSGLVIGVP-----IPREHAASGRVIESAIQ 215 (278)
Q Consensus 164 g~~~~~r~d~~~e~A~~~~~~-~~l~l~~g~lvanP-----iP~e~~~~~~~i~~~i~ 215 (278)
+..+.+++++.+++..- ..+|- --+||.|. ...-..++.+.+++.++
T Consensus 62 ----~~D~~~~~~~~~~~~~~~~~~g~-id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 114 (262)
T 1zem_A 62 ----VCDVTSEEAVIGTVDSVVRDFGK-IDFLFNNAGYQGAFAPVQDYPSDDFARVLT 114 (262)
T ss_dssp ----ECCTTCHHHHHHHHHHHHHHHSC-CCEEEECCCCCCCCBCGGGCCHHHHHHHHH
T ss_pred ----EecCCCHHHHHHHHHHHHHHhCC-CCEEEECCCCCCCCCccccCCHHHHHHHHH
Confidence 23455777777776633 33432 23455542 11123456666666543
No 80
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=37.10 E-value=47 Score=29.08 Aligned_cols=86 Identities=9% Similarity=0.101 Sum_probs=51.0
Q ss_pred chhhhHhHhhhCCeeEEeecCCCCcceeecCCCCccCcccCCHHHHHHHHHHHHhcCCCCeEEEEeCCCccCCCChHH--
Q 023717 132 DIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASGRV-- 209 (278)
Q Consensus 132 Di~~TLE~LET~GV~V~gy~t~~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~~~l~l~~g~lvanPiP~e~~~~~~~-- 209 (278)
|+...-+.|+..|+.++++.... ++. + +.-+.+-+..+.+.+.++....||.+. |+....|.. .+.+.
T Consensus 77 ~~~~l~~~l~~~GL~i~~~~~~~---~~~--~-~~~~~~~~~~~~~~~~i~~A~~lG~~~--v~~~~~~~~--~~~~~~~ 146 (305)
T 3obe_A 77 ASKDYKKMVDDAGLRISSSHLTP---SLR--E-YTKENMPKFDEFWKKATDIHAELGVSC--MVQPSLPRI--ENEDDAK 146 (305)
T ss_dssp CHHHHHHHHHHTTCEEEEEBCCC---SCC--C-CCGGGHHHHHHHHHHHHHHHHHHTCSE--EEECCCCCC--SSHHHHH
T ss_pred CHHHHHHHHHHCCCeEEEeeccc---ccc--c-cchhhHHHHHHHHHHHHHHHHHcCCCE--EEeCCCCCC--CCHHHHH
Confidence 56667789999999999886432 111 0 111112223456777888888888653 333223332 23333
Q ss_pred -HHHHHHHHHHHHHHcCCC
Q 023717 210 -IESAIQSALREAREKNIT 227 (278)
Q Consensus 210 -i~~~i~~Al~ea~~~gi~ 227 (278)
+-+.+.+..+.|++.||+
T Consensus 147 ~~~~~l~~l~~~a~~~Gv~ 165 (305)
T 3obe_A 147 VVSEIFNRAGEITKKAGIL 165 (305)
T ss_dssp HHHHHHHHHHHHHHTTTCE
T ss_pred HHHHHHHHHHHHHHHcCCE
Confidence 345667788888888985
No 81
>1h7n_A 5-aminolaevulinic acid dehydratase; lyase, aldolase, TIM barrel, tetrapyrrole synthesis; HET: SHF; 1.6A {Saccharomyces cerevisiae} SCOP: c.1.10.3 PDB: 1h7p_A* 1h7r_A* 1ohl_A* 1qml_A 1qnv_A 1w31_A* 1h7o_A* 1eb3_A* 1gjp_A* 1ylv_A* 1aw5_A
Probab=37.10 E-value=56 Score=31.02 Aligned_cols=67 Identities=18% Similarity=0.285 Sum_probs=49.2
Q ss_pred CCcceeecCCCCccCc-------ccCCHHHHHHHHHHHHhcCCCCeEEEEeCCC--cc-----CCCChHHHHHHHHHHHH
Q 023717 154 EFPAFFTETSGSKVPC-------RVDSPEDCARLIDVNMKLKLGSGLVIGVPIP--RE-----HAASGRVIESAIQSALR 219 (278)
Q Consensus 154 ~fPaFy~~~Sg~~~~~-------r~d~~~e~A~~~~~~~~l~l~~g~lvanPiP--~e-----~~~~~~~i~~~i~~Al~ 219 (278)
-+|-|...+.+.+-|- |+ +.+.+.+.+..-+++|+++=+||.+|.+ .. .+.++ +.++.+|++
T Consensus 42 I~PlFV~eg~~~~~~I~SMPGv~r~-sid~l~~~~~~~~~lGi~~v~LFgv~~~~~~KD~~gs~A~~~---~g~v~rair 117 (342)
T 1h7n_A 42 IFPLFISDNPDDFTEIDSLPNINRI-GVNRLKDYLKPLVAKGLRSVILFGVPLIPGTKDPVGTAADDP---AGPVIQGIK 117 (342)
T ss_dssp EEEEEEESSTTCEEECTTSTTCEEE-CHHHHHHHHHHHHHTTCCEEEEEEECCSTTCCBTTCGGGGCT---TSHHHHHHH
T ss_pred eeeEEEecCCCCceeCCCCCCceee-CHHHHHHHHHHHHHCCCCEEEEecccCccCCCCccccccCCC---CChHHHHHH
Confidence 4788888887764432 22 5778888999999999999999999755 22 23444 668888888
Q ss_pred HHHHc
Q 023717 220 EAREK 224 (278)
Q Consensus 220 ea~~~ 224 (278)
.-++.
T Consensus 118 ~iK~~ 122 (342)
T 1h7n_A 118 FIREY 122 (342)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87765
No 82
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=37.02 E-value=54 Score=28.36 Aligned_cols=105 Identities=14% Similarity=0.077 Sum_probs=54.8
Q ss_pred HHCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecCCCCcceeecC
Q 023717 83 SMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTET 162 (278)
Q Consensus 83 ~~aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy~~~ 162 (278)
.+.|=.|++|||-||+-+ -+..-|.+-+ .-|+..+-. -=.+..+.+.++..|..+..
T Consensus 5 ~l~gk~vlVTGas~GIG~------aia~~la~~G---~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~------------- 61 (280)
T 3tox_A 5 RLEGKIAIVTGASSGIGR------AAALLFAREG---AKVVVTARN-GNALAELTDEIAGGGGEAAA------------- 61 (280)
T ss_dssp TTTTCEEEESSTTSHHHH------HHHHHHHHTT---CEEEECCSC-HHHHHHHHHHHTTTTCCEEE-------------
T ss_pred CCCCCEEEEECCCcHHHH------HHHHHHHHCC---CEEEEEECC-HHHHHHHHHHHHhcCCcEEE-------------
Confidence 355667999999999944 3454444443 233333321 11234445555544433321
Q ss_pred CCCccCcccCCHHHHHHHHHH-HHhcCCCCeEEEEeCC-----CccCCCChHHHHHHHH
Q 023717 163 SGSKVPCRVDSPEDCARLIDV-NMKLKLGSGLVIGVPI-----PREHAASGRVIESAIQ 215 (278)
Q Consensus 163 Sg~~~~~r~d~~~e~A~~~~~-~~~l~l~~g~lvanPi-----P~e~~~~~~~i~~~i~ 215 (278)
+..-+.+++++.+++.. ...+|- --+||.|.= ..-..++.+.+++.++
T Consensus 62 ----~~~Dv~~~~~v~~~~~~~~~~~g~-iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 115 (280)
T 3tox_A 62 ----LAGDVGDEALHEALVELAVRRFGG-LDTAFNNAGALGAMGEISSLSVEGWRETLD 115 (280)
T ss_dssp ----CCCCTTCHHHHHHHHHHHHHHHSC-CCEEEECCCCCCSCSCGGGCCHHHHHHHHH
T ss_pred ----EECCCCCHHHHHHHHHHHHHHcCC-CCEEEECCCCCCCCCChhhCCHHHHHHHHH
Confidence 23345677887777763 333442 235665531 1223567777776654
No 83
>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}
Probab=36.84 E-value=1.5e+02 Score=28.52 Aligned_cols=102 Identities=22% Similarity=0.266 Sum_probs=49.2
Q ss_pred CCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecCCCCcceeecCCCC
Q 023717 86 GIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGS 165 (278)
Q Consensus 86 GI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy~~~Sg~ 165 (278)
+=.|++|||.||+-+ -+..-|.+-+-..|++++-....-=......+.|+..|..|.-+.
T Consensus 259 ~~~vLITGgtGgIG~------~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~-------------- 318 (511)
T 2z5l_A 259 SGTVLITGGMGAIGR------RLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAA-------------- 318 (511)
T ss_dssp CSEEEEETTTSHHHH------HHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEE--------------
T ss_pred CCEEEEECCCCHHHH------HHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEE--------------
Confidence 345888888888733 333334333322233333221111123344556666665543222
Q ss_pred ccCcccCCHHHHHHHHHHHHhcCCCCeEEEEe-CCCcc---CCCChHHHHHHHH
Q 023717 166 KVPCRVDSPEDCARLIDVNMKLKLGSGLVIGV-PIPRE---HAASGRVIESAIQ 215 (278)
Q Consensus 166 ~~~~r~d~~~e~A~~~~~~~~l~l~~g~lvan-PiP~e---~~~~~~~i~~~i~ 215 (278)
.-+.+++++.+++.. +--.+ ||-| -+... ..++.+.++..++
T Consensus 319 ---~Dvtd~~~v~~~~~~----~~ld~-VVh~AGv~~~~~~~~~~~~~~~~~~~ 364 (511)
T 2z5l_A 319 ---CDVAERDALAALVTA----YPPNA-VFHTAGILDDAVIDTLSPESFETVRG 364 (511)
T ss_dssp ---CCSSCHHHHHHHHHH----SCCSE-EEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred ---eCCCCHHHHHHHHhc----CCCcE-EEECCcccCCcccccCCHHHHHHHHH
Confidence 345578888888776 21233 4433 23222 2456666666544
No 84
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=36.44 E-value=1.5e+02 Score=25.10 Aligned_cols=104 Identities=19% Similarity=0.295 Sum_probs=52.7
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecCCCCcceeecCC
Q 023717 84 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETS 163 (278)
Q Consensus 84 ~aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy~~~S 163 (278)
+.|=.+++|||-||+-+ -+..-|.+-+- .|++++--.. .+..+.+.|+..|..+..+
T Consensus 19 l~~k~vlVTGas~gIG~------aia~~l~~~G~-~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~------------- 75 (273)
T 1ae1_A 19 LKGTTALVTGGSKGIGY------AIVEELAGLGA-RVYTCSRNEK---ELDECLEIWREKGLNVEGS------------- 75 (273)
T ss_dssp CTTCEEEEESCSSHHHH------HHHHHHHHTTC-EEEEEESCHH---HHHHHHHHHHHTTCCEEEE-------------
T ss_pred CCCCEEEEECCcchHHH------HHHHHHHHCCC-EEEEEeCCHH---HHHHHHHHHHhcCCceEEE-------------
Confidence 34567999999999944 34444444432 2444332221 2344555565555433222
Q ss_pred CCccCcccCCHHHHHHHHHHHH-hcCCCCeEEEEeC-C---CccCCCChHHHHHHH
Q 023717 164 GSKVPCRVDSPEDCARLIDVNM-KLKLGSGLVIGVP-I---PREHAASGRVIESAI 214 (278)
Q Consensus 164 g~~~~~r~d~~~e~A~~~~~~~-~l~l~~g~lvanP-i---P~e~~~~~~~i~~~i 214 (278)
+..+.+++++.+++..-. .++-+--+||.|. + ..-...+.+.+++.+
T Consensus 76 ----~~D~~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~ 127 (273)
T 1ae1_A 76 ----VCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIM 127 (273)
T ss_dssp ----ECCTTCHHHHHHHHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHH
T ss_pred ----ECCCCCHHHHHHHHHHHHHHcCCCCcEEEECCCCCCCCChhhCCHHHHHHHH
Confidence 234557777777776433 3311223455553 1 112345666666544
No 85
>3bch_A 40S ribosomal protein SA; laminin receptor, P40 ribosomal protein, acetylation, cytoplasm, phosphorylation, polymorphism; 2.15A {Homo sapiens}
Probab=36.34 E-value=16 Score=33.17 Aligned_cols=75 Identities=23% Similarity=0.201 Sum_probs=46.8
Q ss_pred cccchhhhHhHhhh-----------CCeeEEeecCC----------CCcceeecCCCCccCcccCCHHHHHHHHHHHHhc
Q 023717 129 SILDIPRTLEYLET-----------HGVCVAAYKTN----------EFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKL 187 (278)
Q Consensus 129 sILDi~~TLE~LET-----------~GV~V~gy~t~----------~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~~~l 187 (278)
.|+|+.+|+++|.. ..|.+||-+.. .+-+||.. +..+|+.+.+..+ ..+
T Consensus 80 hIIdL~kT~~~L~~A~~~i~~~~~~~~iLfVgTk~~aq~~V~~~A~~~g~~yv~--~RWlgG~LTN~~~--------~~f 149 (253)
T 3bch_A 80 YIINLKRTWEKLLLAARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIA--GRFTPGTFTNQIQ--------AAF 149 (253)
T ss_dssp EEECHHHHHHHHHHHHHHHHTCSSGGGEEEEECSHHHHHHHHHHHHHHCCEEEE--SCCCTTTTTCCSC--------STT
T ss_pred EEEeHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHhCCeeec--ceecCCcccCccc--------ccc
Confidence 69999999998854 33667765421 12234432 2234444443322 135
Q ss_pred CCCCeEEEEeCCCccCCCChHHHHHHHHHHHHHHHHcCC
Q 023717 188 KLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNI 226 (278)
Q Consensus 188 ~l~~g~lvanPiP~e~~~~~~~i~~~i~~Al~ea~~~gi 226 (278)
..|.-++|.+|.-+ .+|++||...||
T Consensus 150 ~~PdlliV~Dp~~e-------------~~AI~EA~~lgI 175 (253)
T 3bch_A 150 REPRLLVVTDPRAD-------------HQPLTEASYVNL 175 (253)
T ss_dssp CSCSEEEESCTTTT-------------HHHHHHHHHTTC
T ss_pred CCCCEEEEECCCcc-------------chHHHHHHHhCC
Confidence 67888888888332 578899999998
No 86
>3eaf_A ABC transporter, substrate binding protein; PSI2, NYSGXRC, substrate binding P structural genomics, protein structure initiative; 2.00A {Aeropyrum pernix}
Probab=36.14 E-value=1.1e+02 Score=26.82 Aligned_cols=121 Identities=12% Similarity=-0.012 Sum_probs=71.5
Q ss_pred hhHHHHHHHHHHCCCcEEEecccccccCCCcccccccc-----------chhh-hcCCCeEEEec-cccc-ccchhhhHh
Q 023717 73 TTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISS-----------DLTE-LGRTPVAVVSA-GIKS-ILDIPRTLE 138 (278)
Q Consensus 73 TTVaaTm~lA~~aGI~VFaTGGIGGVHrg~~~t~DiSa-----------DL~e-L~rtpV~VVca-G~Ks-ILDi~~TLE 138 (278)
.+..+.+-++...+|+++....--..- .....|-++. -|.+ |+-..|++|.. .--. .-=...-.+
T Consensus 86 ~~~~a~~~~~~~~~iP~i~~~~~~~~~-~~~~~f~~~~~~~~~~~~~~~~l~~~~g~~~iaii~~~~~~~g~~~~~~~~~ 164 (391)
T 3eaf_A 86 ADTEKLSDQVDTDKITYISASYSAKLL-VKPFNFYPAPDYSTQACSGLAFLASEFGQGKLALAYDSKVAYSRSPIGAIKK 164 (391)
T ss_dssp HHHHHHHHHHHHHTCEEEESCCCGGGT-TSTTEECSSCCHHHHHHHHHHHHHHHHCSEEEEEEECTTCHHHHTTHHHHHH
T ss_pred HHHHHHHHHHhhcCCeEEecccchhhc-CCCcEEEeCCCHHHHHHHHHHHHHHhcCCCEEEEEEecCChhHHHHHHHHHH
Confidence 334455667888999999755322211 1111222222 1334 57788998876 2211 111223346
Q ss_pred HhhhCCeeEEeec-----CCCCcceeec----CCCCccCcccCCHHHHHHHHHHHHhcCCCCeEE
Q 023717 139 YLETHGVCVAAYK-----TNEFPAFFTE----TSGSKVPCRVDSPEDCARLIDVNMKLKLGSGLV 194 (278)
Q Consensus 139 ~LET~GV~V~gy~-----t~~fPaFy~~----~Sg~~~~~r~d~~~e~A~~~~~~~~l~l~~g~l 194 (278)
.|+.+|++|+... +.+|.....+ .++..+=+-..+..+++.++++-+++|+...++
T Consensus 165 ~l~~~G~~v~~~~~~~~~~~d~~~~~~~~~l~~~~~dav~~~~~~~~~~~~~~~~~~~g~~~~~~ 229 (391)
T 3eaf_A 165 AAPSLGLQVVGDYDLPLRATEADAERIAREMLAADPDYVWCGNTISSCSLLGRAMAKVGLDAFLL 229 (391)
T ss_dssp HTGGGTEEEEEEEECCTTCCHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHHHHHTCCCEEE
T ss_pred HHHHcCCceeeeeccCCCCcCHHHHHHHHHHHHcCCCEEEEecCcHHHHHHHHHHHHCCCCceEE
Confidence 7889999987642 2234444433 555555566677889999999888899876653
No 87
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=35.97 E-value=1.6e+02 Score=25.89 Aligned_cols=82 Identities=21% Similarity=0.219 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHCCCcccEEE-EE-cCceeecCCHHHHHHHHh----cCCCcccccc--cchHHHHhcCCCchhhHHHHHH
Q 023717 9 TAKEVEAIVRNNGAVPATIA-IL-EGLPCVGLSTEELERLAK----LGSKAQKTAR--RDIAHVVATRGNGATTVSATMF 80 (278)
Q Consensus 9 ~A~~~E~~vR~~GavPATIa-ii-~G~i~VGl~~~el~~la~----~~~~~~K~sr--RDl~~~~a~~~~GaTTVaaTm~ 80 (278)
+..++.++++..+.. .+= || .+.+ +++|+.+.++ .+-+.+|.|. -.-.|.-..+..||.|+...-.
T Consensus 100 v~~ei~~v~~a~~~~--~lKvIlEt~~L----t~eei~~a~~ia~eaGADfVKTSTGf~~~~~~~~~~~~~gAt~~dv~l 173 (226)
T 1vcv_A 100 VRRDLISVVGAAGGR--VVKVITEEPYL----RDEERYTLYDIIAEAGAHFIKSSTGFAEEAYAARQGNPVHSTPERAAA 173 (226)
T ss_dssp HHHHHHHHHHHTTTS--EEEEECCGGGC----CHHHHHHHHHHHHHHTCSEEECCCSCCCHHHHHHTTCCSSCCHHHHHH
T ss_pred HHHHHHHHHHHHcCC--CceEEEeccCC----CHHHHHHHHHHHHHcCCCEEEeCCCCCccccccccCCCCCCCHHHHHH
Confidence 455677777766532 333 22 4444 6888776653 2356889883 3556677777789999888777
Q ss_pred HHHH---CC--CcEEEecccc
Q 023717 81 FASM---VG--IPVFVTGGIG 96 (278)
Q Consensus 81 lA~~---aG--I~VFaTGGIG 96 (278)
+.+. .| ++|-+.|||-
T Consensus 174 m~~~i~~~g~~v~vKaaGGir 194 (226)
T 1vcv_A 174 IARYIKEKGYRLGVKMAGGIR 194 (226)
T ss_dssp HHHHHHHHTCCCEEEEESSCC
T ss_pred HHHHHHHhCCCceEEEeCCCC
Confidence 7776 77 8888888664
No 88
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=35.73 E-value=97 Score=26.25 Aligned_cols=18 Identities=33% Similarity=0.420 Sum_probs=13.6
Q ss_pred HHCCCcEEEecccccccC
Q 023717 83 SMVGIPVFVTGGIGGVHR 100 (278)
Q Consensus 83 ~~aGI~VFaTGGIGGVHr 100 (278)
.+.|=.+++|||-||+-+
T Consensus 5 ~l~~k~vlVTGas~gIG~ 22 (264)
T 2dtx_A 5 DLRDKVVIVTGASMGIGR 22 (264)
T ss_dssp GGTTCEEEEESCSSHHHH
T ss_pred ccCCCEEEEeCCCCHHHH
Confidence 355667899999999844
No 89
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=35.72 E-value=1e+02 Score=26.25 Aligned_cols=104 Identities=18% Similarity=0.240 Sum_probs=55.6
Q ss_pred CCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecCCCCcceeecCCC
Q 023717 85 VGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSG 164 (278)
Q Consensus 85 aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy~~~Sg 164 (278)
.|=.+++|||-||+-+ -+..-|.+-+ ..|++++... --....+.+.++..|..+..+.
T Consensus 26 ~~k~~lVTGas~GIG~------aia~~la~~G-~~Vv~~~~~~--~~~~~~~~~~~~~~~~~~~~~~------------- 83 (267)
T 3u5t_A 26 TNKVAIVTGASRGIGA------AIAARLASDG-FTVVINYAGK--AAAAEEVAGKIEAAGGKALTAQ------------- 83 (267)
T ss_dssp -CCEEEEESCSSHHHH------HHHHHHHHHT-CEEEEEESSC--SHHHHHHHHHHHHTTCCEEEEE-------------
T ss_pred CCCEEEEeCCCCHHHH------HHHHHHHHCC-CEEEEEcCCC--HHHHHHHHHHHHhcCCeEEEEE-------------
Confidence 4667999999999944 3444444433 2233332222 1233455566666665444332
Q ss_pred CccCcccCCHHHHHHHHHHH-HhcCCCCeEEEEeC----CCccCCCChHHHHHHHH
Q 023717 165 SKVPCRVDSPEDCARLIDVN-MKLKLGSGLVIGVP----IPREHAASGRVIESAIQ 215 (278)
Q Consensus 165 ~~~~~r~d~~~e~A~~~~~~-~~l~l~~g~lvanP----iP~e~~~~~~~i~~~i~ 215 (278)
.-+.+++++.+++..- ..+| +--+||.|. ...-...+.+.+++.++
T Consensus 84 ----~Dl~~~~~v~~~~~~~~~~~g-~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~ 134 (267)
T 3u5t_A 84 ----ADVSDPAAVRRLFATAEEAFG-GVDVLVNNAGIMPLTTIAETGDAVFDRVIA 134 (267)
T ss_dssp ----CCTTCHHHHHHHHHHHHHHHS-CEEEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred ----cCCCCHHHHHHHHHHHHHHcC-CCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 3456777877777643 3333 233566553 12223567777776555
No 90
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=35.46 E-value=1.5e+02 Score=28.56 Aligned_cols=87 Identities=17% Similarity=0.137 Sum_probs=41.7
Q ss_pred hhHHHHHHHHHHCCCcEEEecccccccCCCcc-------ccccccchhhhc-CCCeEEE-ecccccccchhhhHhHhhhC
Q 023717 73 TTVSATMFFASMVGIPVFVTGGIGGVHRHGEH-------TMDISSDLTELG-RTPVAVV-SAGIKSILDIPRTLEYLETH 143 (278)
Q Consensus 73 TTVaaTm~lA~~aGI~VFaTGGIGGVHrg~~~-------t~DiSaDL~eL~-rtpV~VV-caG~KsILDi~~TLE~LET~ 143 (278)
+|... ...+..+|.+.+..|+=+|-|.+... +++.=.++.+.. +..+=|+ +-|+++--|+.+-|+.
T Consensus 279 ~t~e~-a~~l~~aGaD~I~vg~g~Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kal~~---- 353 (490)
T 4avf_A 279 ATAEA-AKALAEAGADAVKVGIGPGSICTTRIVAGVGVPQISAIANVAAALEGTGVPLIADGGIRFSGDLAKAMVA---- 353 (490)
T ss_dssp CSHHH-HHHHHHTTCSEEEECSSCSTTCHHHHHTCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHHH----
T ss_pred CcHHH-HHHHHHcCCCEEEECCCCCcCCCccccCCCCccHHHHHHHHHHHhccCCCcEEEeCCCCCHHHHHHHHHc----
Confidence 34433 45566678887776543333322111 111112333322 2233333 3467777777776652
Q ss_pred CeeEEeec-----CCCCcceeecCCC
Q 023717 144 GVCVAAYK-----TNEFPAFFTETSG 164 (278)
Q Consensus 144 GV~V~gy~-----t~~fPaFy~~~Sg 164 (278)
|.-.+..+ ++|.|+=+.-..|
T Consensus 354 GAd~V~vGs~~~~~~Esp~~~~~~~g 379 (490)
T 4avf_A 354 GAYCVMMGSMFAGTEEAPGEIELFQG 379 (490)
T ss_dssp TCSEEEECTTTTTBTTSSSCEEEETT
T ss_pred CCCeeeecHHHhcCCCCCCceEeECC
Confidence 55444443 5778765543333
No 91
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=35.37 E-value=1.2e+02 Score=25.13 Aligned_cols=103 Identities=21% Similarity=0.220 Sum_probs=53.6
Q ss_pred CCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecCCCCcceeecCCCC
Q 023717 86 GIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGS 165 (278)
Q Consensus 86 GI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy~~~Sg~ 165 (278)
|=.+++|||-||+-+ -+..-|.+-+ ..|++++. .+-=....+.+.++..|..+..+
T Consensus 4 ~k~~lVTGas~gIG~------~ia~~l~~~G-~~V~~~~~--~~~~~~~~~~~~~~~~~~~~~~~--------------- 59 (246)
T 3osu_A 4 TKSALVTGASRGIGR------SIALQLAEEG-YNVAVNYA--GSKEKAEAVVEEIKAKGVDSFAI--------------- 59 (246)
T ss_dssp SCEEEETTCSSHHHH------HHHHHHHHTT-CEEEEEES--SCHHHHHHHHHHHHHTTSCEEEE---------------
T ss_pred CCEEEEECCCChHHH------HHHHHHHHCC-CEEEEEeC--CCHHHHHHHHHHHHhcCCcEEEE---------------
Confidence 345899999999954 3444343332 12333222 22223455666677766544322
Q ss_pred ccCcccCCHHHHHHHHHHH-HhcCCCCeEEEEeC-CC---ccCCCChHHHHHHHH
Q 023717 166 KVPCRVDSPEDCARLIDVN-MKLKLGSGLVIGVP-IP---REHAASGRVIESAIQ 215 (278)
Q Consensus 166 ~~~~r~d~~~e~A~~~~~~-~~l~l~~g~lvanP-iP---~e~~~~~~~i~~~i~ 215 (278)
+.-+.+++++.+++..- .++|- --+||.|. +. .-..++.++.++.++
T Consensus 60 --~~Dv~d~~~v~~~~~~~~~~~g~-id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 111 (246)
T 3osu_A 60 --QANVADADEVKAMIKEVVSQFGS-LDVLVNNAGITRDNLLMRMKEQEWDDVID 111 (246)
T ss_dssp --ECCTTCHHHHHHHHHHHHHHHSC-CCEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred --EccCCCHHHHHHHHHHHHHHcCC-CCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 23456778877777633 33442 23455553 21 123456766666544
No 92
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=35.00 E-value=1.3e+02 Score=25.56 Aligned_cols=46 Identities=13% Similarity=0.203 Sum_probs=25.3
Q ss_pred cccCCHHHHHHHHHHH-HhcCCCCeEEEEeC-C---CccCCCChHHHHHHHH
Q 023717 169 CRVDSPEDCARLIDVN-MKLKLGSGLVIGVP-I---PREHAASGRVIESAIQ 215 (278)
Q Consensus 169 ~r~d~~~e~A~~~~~~-~~l~l~~g~lvanP-i---P~e~~~~~~~i~~~i~ 215 (278)
..+.+++++.+++..- ..+| +--+||.|. + ..-...+.+.+++.++
T Consensus 60 ~Dv~~~~~v~~~~~~~~~~~g-~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 110 (269)
T 3vtz_A 60 IDVTNEEEVKEAVEKTTKKYG-RIDILVNNAGIEQYSPLHLTPTEIWRRIID 110 (269)
T ss_dssp CCTTCHHHHHHHHHHHHHHHS-CCCEEEECCCCCCCCCGGGSCHHHHHHHHH
T ss_pred ecCCCHHHHHHHHHHHHHHcC-CCCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 4677888888887643 3344 223455553 1 1123456666665544
No 93
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=34.98 E-value=1.4e+02 Score=25.85 Aligned_cols=103 Identities=14% Similarity=0.226 Sum_probs=53.4
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecCCCCcceeecCC
Q 023717 84 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETS 163 (278)
Q Consensus 84 ~aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy~~~S 163 (278)
+.|=.+++|||-||+-+ -+..-|.+-+- .|++++--.. .+..+.+.|+..|..+..
T Consensus 32 l~~k~vlVTGas~gIG~------aia~~L~~~G~-~V~~~~r~~~---~~~~~~~~l~~~~~~~~~-------------- 87 (291)
T 3cxt_A 32 LKGKIALVTGASYGIGF------AIASAYAKAGA-TIVFNDINQE---LVDRGMAAYKAAGINAHG-------------- 87 (291)
T ss_dssp CTTCEEEEETCSSHHHH------HHHHHHHHTTC-EEEEEESSHH---HHHHHHHHHHHTTCCCEE--------------
T ss_pred CCCCEEEEeCCCcHHHH------HHHHHHHHCCC-EEEEEeCCHH---HHHHHHHHHHhcCCeEEE--------------
Confidence 44667999999999944 45555544432 3443332211 233445556554432211
Q ss_pred CCccCcccCCHHHHHHHHHH-HHhcCCCCeEEEEeC-CC---ccCCCChHHHHHHH
Q 023717 164 GSKVPCRVDSPEDCARLIDV-NMKLKLGSGLVIGVP-IP---REHAASGRVIESAI 214 (278)
Q Consensus 164 g~~~~~r~d~~~e~A~~~~~-~~~l~l~~g~lvanP-iP---~e~~~~~~~i~~~i 214 (278)
++.-+.+++++.+++.. ...+|- --+||.|. +. .-..++.+.+++.+
T Consensus 88 ---~~~Dv~d~~~v~~~~~~~~~~~g~-iD~lvnnAg~~~~~~~~~~~~~~~~~~~ 139 (291)
T 3cxt_A 88 ---YVCDVTDEDGIQAMVAQIESEVGI-IDILVNNAGIIRRVPMIEMTAAQFRQVI 139 (291)
T ss_dssp ---EECCTTCHHHHHHHHHHHHHHTCC-CCEEEECCCCCCCCCGGGSCHHHHHHHH
T ss_pred ---EEecCCCHHHHHHHHHHHHHHcCC-CcEEEECCCcCCCCCcccCCHHHHHHHH
Confidence 12346678888777764 344542 23455542 11 11345677666654
No 94
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=34.90 E-value=3.1e+02 Score=26.19 Aligned_cols=67 Identities=19% Similarity=0.369 Sum_probs=50.4
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecCCCCcceeecCC
Q 023717 84 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETS 163 (278)
Q Consensus 84 ~aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy~~~S 163 (278)
....+||+=|+++++--+ .+.. +-..-+||-|++-=+. +.--+.|+..||.|+ |.|....-
T Consensus 283 ~~~~DIliP~A~~n~i~~--------~~a~---~l~ak~V~EgAN~p~t-~~a~~~l~~~Gi~~~-------PD~~aNaG 343 (415)
T 2tmg_A 283 ELDVDILVPAALEGAIHA--------GNAE---RIKAKAVVEGANGPTT-PEADEILSRRGILVV-------PDILANAG 343 (415)
T ss_dssp TCSCSEEEECSSTTSBCH--------HHHT---TCCCSEEECCSSSCBC-HHHHHHHHHTTCEEE-------CHHHHTCH
T ss_pred cCCCcEEEecCCcCccCc--------ccHH---HcCCeEEEeCCCcccC-HHHHHHHHHCCCEEE-------ChHHHhCC
Confidence 467899999999876321 1112 2256688999998887 777789999999977 99998888
Q ss_pred CCccCc
Q 023717 164 GSKVPC 169 (278)
Q Consensus 164 g~~~~~ 169 (278)
|+-+.|
T Consensus 344 GV~~s~ 349 (415)
T 2tmg_A 344 GVTVSY 349 (415)
T ss_dssp HHHHHH
T ss_pred CceEEE
Confidence 877654
No 95
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=34.48 E-value=54 Score=28.77 Aligned_cols=70 Identities=26% Similarity=0.360 Sum_probs=37.6
Q ss_pred HHHHHHHCCCcEEEecccccc-----cCCCcccccccc-----chhhhc---CCCeEEEecccccccchhhhHhHhhhCC
Q 023717 78 TMFFASMVGIPVFVTGGIGGV-----HRHGEHTMDISS-----DLTELG---RTPVAVVSAGIKSILDIPRTLEYLETHG 144 (278)
Q Consensus 78 Tm~lA~~aGI~VFaTGGIGGV-----Hrg~~~t~DiSa-----DL~eL~---rtpV~VVcaG~KsILDi~~TLE~LET~G 144 (278)
+..+|+..|.+|++|+.---- ..|+...+|.+. .+.++. ...+++-|+|.. -+...++.|...|
T Consensus 162 ~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~i~~~~~~~~~d~vi~~~g~~---~~~~~~~~l~~~G 238 (333)
T 1wly_A 162 MVPWARHLGATVIGTVSTEEKAETARKLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGKD---TLQKSLDCLRPRG 238 (333)
T ss_dssp HHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEECSCTT---THHHHHHTEEEEE
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCCHHHHHHHHHHhCCCCCeEEEECCcHH---HHHHHHHhhccCC
Confidence 345556667777776532100 003333444432 233332 356888899973 3567788888877
Q ss_pred eeEEeec
Q 023717 145 VCVAAYK 151 (278)
Q Consensus 145 V~V~gy~ 151 (278)
.- +-++
T Consensus 239 ~i-v~~g 244 (333)
T 1wly_A 239 MC-AAYG 244 (333)
T ss_dssp EE-EECC
T ss_pred EE-EEEe
Confidence 43 3343
No 96
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=34.46 E-value=1.5e+02 Score=25.70 Aligned_cols=104 Identities=21% Similarity=0.257 Sum_probs=55.4
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCC-eeEEeecCCCCcceeecC
Q 023717 84 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHG-VCVAAYKTNEFPAFFTET 162 (278)
Q Consensus 84 ~aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~G-V~V~gy~t~~fPaFy~~~ 162 (278)
+.|=.+++|||-||+-+ -+..-|.+-+- .|++++-- -=.+..+.+.|+..| ..+..
T Consensus 39 l~~k~vlVTGas~GIG~------aia~~la~~G~-~V~~~~r~---~~~~~~~~~~l~~~~~~~~~~------------- 95 (293)
T 3rih_A 39 LSARSVLVTGGTKGIGR------GIATVFARAGA-NVAVAARS---PRELSSVTAELGELGAGNVIG------------- 95 (293)
T ss_dssp CTTCEEEETTTTSHHHH------HHHHHHHHTTC-EEEEEESS---GGGGHHHHHHHTTSSSSCEEE-------------
T ss_pred CCCCEEEEeCCCcHHHH------HHHHHHHHCCC-EEEEEECC---HHHHHHHHHHHHhhCCCcEEE-------------
Confidence 45667999999999944 45544444432 34444322 223455666666554 22221
Q ss_pred CCCccCcccCCHHHHHHHHHH-HHhcCCCCeEEEEeCC----CccCCCChHHHHHHHH
Q 023717 163 SGSKVPCRVDSPEDCARLIDV-NMKLKLGSGLVIGVPI----PREHAASGRVIESAIQ 215 (278)
Q Consensus 163 Sg~~~~~r~d~~~e~A~~~~~-~~~l~l~~g~lvanPi----P~e~~~~~~~i~~~i~ 215 (278)
++.-+.+++++.+++.. ..++|-- -+||.|.= ..-..++.+.+++.++
T Consensus 96 ----~~~Dv~d~~~v~~~~~~~~~~~g~i-D~lvnnAg~~~~~~~~~~~~~~~~~~~~ 148 (293)
T 3rih_A 96 ----VRLDVSDPGSCADAARTVVDAFGAL-DVVCANAGIFPEARLDTMTPEQLSEVLD 148 (293)
T ss_dssp ----EECCTTCHHHHHHHHHHHHHHHSCC-CEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred ----EEEeCCCHHHHHHHHHHHHHHcCCC-CEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 12345678887777763 3344422 24555521 1122567777766554
No 97
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=34.37 E-value=23 Score=31.39 Aligned_cols=63 Identities=13% Similarity=0.108 Sum_probs=32.0
Q ss_pred hHHHHHHHHHHC----CCcEEEecccccccCCCccccccccchhhhc-CCCeEEEecc---cccc-cchhhhHhHhhhCC
Q 023717 74 TVSATMFFASMV----GIPVFVTGGIGGVHRHGEHTMDISSDLTELG-RTPVAVVSAG---IKSI-LDIPRTLEYLETHG 144 (278)
Q Consensus 74 TVaaTm~lA~~a----GI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~-rtpV~VVcaG---~KsI-LDi~~TLE~LET~G 144 (278)
-....-.++... .|||++.||++-. +==.++.+++ ..-=++|.++ -.-- ++++..++||.++|
T Consensus 189 d~eli~~l~~~~~~~~~iPVIasGGi~s~--------ed~~~l~~~~~G~~gvivg~al~l~~g~~~~~~~~~~~~~~~~ 260 (260)
T 2agk_A 189 DELLVSKLFEWTKDYDDLKIVYAGGAKSV--------DDLKLVDELSHGKVDLTFGSSLDIFGGNLVKFEDCCRWNEKQG 260 (260)
T ss_dssp CHHHHHHHHHHHTTCSSCEEEEESCCCCT--------HHHHHHHHHHTTCEEEECCTTBGGGTCSSBCHHHHHHHHHHHC
T ss_pred CHHHHHHHHHhhcccCCceEEEeCCCCCH--------HHHHHHHHhcCCCCEEEeeCCHHHcCCCCCCHHHHHHHHHhcC
Confidence 444555566666 7888888777632 2112233332 1122233332 1122 56667777777665
No 98
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=34.25 E-value=77 Score=26.12 Aligned_cols=91 Identities=13% Similarity=0.101 Sum_probs=52.1
Q ss_pred chhhhHhHhhhCCeeEEeecCCCCcceeecCCCCc--cCcccCCHHHHHHHHHHHHhcCCCCeEEEEeC--CCccCCCCh
Q 023717 132 DIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSK--VPCRVDSPEDCARLIDVNMKLKLGSGLVIGVP--IPREHAASG 207 (278)
Q Consensus 132 Di~~TLE~LET~GV~V~gy~t~~fPaFy~~~Sg~~--~~~r~d~~~e~A~~~~~~~~l~l~~g~lvanP--iP~e~~~~~ 207 (278)
|+....+.|+..|+.+.++.+.. ..|.....+.. -..|-...+...+.++....||.+ .++..| .|.. .+.
T Consensus 41 ~~~~~~~~l~~~gl~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~--~v~~~~g~~~~~--~~~ 115 (260)
T 1k77_A 41 STLQIQKQLEQNHLTLALFNTAP-GDINAGEWGLSALPGREHEAHADIDLALEYALALNCE--QVHVMAGVVPAG--EDA 115 (260)
T ss_dssp CHHHHHHHHHHTTCEEEEEECCC-CCGGGTCSCSTTCTTCHHHHHHHHHHHHHHHHHTTCS--EEECCCCBCCTT--SCH
T ss_pred CHHHHHHHHHHcCCceEEEecCC-cccccccCCCCCChhHHHHHHHHHHHHHHHHHHcCCC--EEEECcCCCCCC--CCH
Confidence 56777889999999999987521 11211111110 011223455677778888888854 333333 2322 232
Q ss_pred ----HHHHHHHHHHHHHHHHcCCC
Q 023717 208 ----RVIESAIQSALREAREKNIT 227 (278)
Q Consensus 208 ----~~i~~~i~~Al~ea~~~gi~ 227 (278)
+.+.+.+++..+.|++.||+
T Consensus 116 ~~~~~~~~~~l~~l~~~a~~~gv~ 139 (260)
T 1k77_A 116 ERYRAVFIDNIRYAADRFAPHGKR 139 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCE
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCE
Confidence 34556677777888888884
No 99
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=34.20 E-value=1.2e+02 Score=25.28 Aligned_cols=104 Identities=21% Similarity=0.298 Sum_probs=51.9
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecCCCCcceeecCC
Q 023717 84 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETS 163 (278)
Q Consensus 84 ~aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy~~~S 163 (278)
+.|=.+++|||-||+-+ -+..-|.+-+ ..|++++--.. .+..+.+.|+..|..+..+
T Consensus 12 l~~k~vlVTGas~gIG~------~ia~~l~~~G-~~V~~~~r~~~---~~~~~~~~l~~~~~~~~~~------------- 68 (260)
T 2zat_A 12 LENKVALVTASTDGIGL------AIARRLAQDG-AHVVVSSRKQE---NVDRTVATLQGEGLSVTGT------------- 68 (260)
T ss_dssp TTTCEEEESSCSSHHHH------HHHHHHHHTT-CEEEEEESCHH---HHHHHHHHHHHTTCCEEEE-------------
T ss_pred CCCCEEEEECCCcHHHH------HHHHHHHHCC-CEEEEEeCCHH---HHHHHHHHHHhcCCceEEE-------------
Confidence 45667999999999944 3444444433 23443332211 2344555565555333222
Q ss_pred CCccCcccCCHHHHHHHHHHH-HhcCCCCeEEEEeC-C----CccCCCChHHHHHHHH
Q 023717 164 GSKVPCRVDSPEDCARLIDVN-MKLKLGSGLVIGVP-I----PREHAASGRVIESAIQ 215 (278)
Q Consensus 164 g~~~~~r~d~~~e~A~~~~~~-~~l~l~~g~lvanP-i----P~e~~~~~~~i~~~i~ 215 (278)
...+.+++++.+++..- ..+|- --+||.|- + ..-...+.+.+++.++
T Consensus 69 ----~~D~~~~~~~~~~~~~~~~~~g~-iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 121 (260)
T 2zat_A 69 ----VCHVGKAEDRERLVAMAVNLHGG-VDILVSNAAVNPFFGNIIDATEEVWDKILH 121 (260)
T ss_dssp ----ECCTTCHHHHHHHHHHHHHHHSC-CCEEEECCCCCCCCBCGGGCCHHHHHHHHH
T ss_pred ----EccCCCHHHHHHHHHHHHHHcCC-CCEEEECCCCCCCCCCcccCCHHHHHHHHH
Confidence 12345677777766633 33432 22455542 1 1112456666665543
No 100
>3u5c_A 40S ribosomal protein S0-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_A 3o30_A 3o2z_A 3u5g_A 3jyv_B* 1s1h_B
Probab=34.08 E-value=29 Score=31.51 Aligned_cols=75 Identities=20% Similarity=0.176 Sum_probs=48.6
Q ss_pred cccchhhhHhHhh-----------hCCeeEEeecCC----------CCcceeecCCCCccCcccCCHHHHHHHHHHHHhc
Q 023717 129 SILDIPRTLEYLE-----------THGVCVAAYKTN----------EFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKL 187 (278)
Q Consensus 129 sILDi~~TLE~LE-----------T~GV~V~gy~t~----------~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~~~l 187 (278)
.|+|+.+|+++|. -..|.+||-+.. .+-+||.. +.-+|+.+.+... .++
T Consensus 46 hIIdL~kT~~~L~~A~~~i~~i~~~~~vlfVgTk~~~q~~V~k~A~~~g~~~v~--~rwlgGtLTN~~t--------~~f 115 (252)
T 3u5c_A 46 HVINVGKTWEKLVLAARIIAAIPNPEDVVAISSRTFGQRAVLKFAAHTGATPIA--GRFTPGSFTNYIT--------RSF 115 (252)
T ss_dssp EEECHHHHHHHHHHHHHHHTTSSSGGGEEEEECSHHHHHHHHHHHHHSSCEEEE--SCCCTTSSSCTTS--------TTC
T ss_pred EEecHHHHHHHHHHHHHHHHHHhcCCEEEEEeCCcHHHHHHHHHHHHhCCceec--CcccCCcccChhh--------hhc
Confidence 6999999999984 224666665421 22335542 3445555555433 246
Q ss_pred CCCCeEEEEeCCCccCCCChHHHHHHHHHHHHHHHHcCC
Q 023717 188 KLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNI 226 (278)
Q Consensus 188 ~l~~g~lvanPiP~e~~~~~~~i~~~i~~Al~ea~~~gi 226 (278)
.+|.-++|.+|--+ .+|+.||...||
T Consensus 116 ~~PdllvV~Dp~~d-------------~~ai~EA~~l~I 141 (252)
T 3u5c_A 116 KEPRLVIVTDPRSD-------------AQAIKEASYVNI 141 (252)
T ss_dssp CCCSEEEESCTTTT-------------HHHHHHHHTTTC
T ss_pred cCCceEEEeCCccc-------------hHHHHHHHHcCC
Confidence 78999999988422 478889998887
No 101
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=33.81 E-value=1e+02 Score=27.99 Aligned_cols=85 Identities=12% Similarity=0.126 Sum_probs=51.2
Q ss_pred cccccchhh-hcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecCCCCcceeecCCCCccCcccCCHHHHHHHHHHH
Q 023717 106 MDISSDLTE-LGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVN 184 (278)
Q Consensus 106 ~DiSaDL~e-L~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~ 184 (278)
.-++.||.+ |.+..|+|-++-+.+. ...+++...+|+||| .+|.- | ++++.+++-...
T Consensus 76 v~v~~dl~~ll~~aDVvIDFT~p~a~---~~~~~~~l~~Gv~vV-iGTTG---~--------------~~e~~~~L~~aa 134 (288)
T 3ijp_A 76 VRITDDPESAFSNTEGILDFSQPQAS---VLYANYAAQKSLIHI-IGTTG---F--------------SKTEEAQIADFA 134 (288)
T ss_dssp CBCBSCHHHHTTSCSEEEECSCHHHH---HHHHHHHHHHTCEEE-ECCCC---C--------------CHHHHHHHHHHH
T ss_pred ceeeCCHHHHhcCCCEEEEcCCHHHH---HHHHHHHHHcCCCEE-EECCC---C--------------CHHHHHHHHHHh
Confidence 456788888 4666688889988775 346678888999999 44321 1 244444444443
Q ss_pred HhcCCCCeEEEEeCCCccCCCChHHHHHHHHHHHH
Q 023717 185 MKLKLGSGLVIGVPIPREHAASGRVIESAIQSALR 219 (278)
Q Consensus 185 ~~l~l~~g~lvanPiP~e~~~~~~~i~~~i~~Al~ 219 (278)
++ .++ |.-| .+++--..+.+++++|-+
T Consensus 135 ~~----~~~-~~a~---N~SiGv~ll~~l~~~aa~ 161 (288)
T 3ijp_A 135 KY----TTI-VKSG---NMSLGVNLLANLVKRAAK 161 (288)
T ss_dssp TT----SEE-EECS---CCCHHHHHHHHHHHHHHH
T ss_pred Cc----CCE-EEEC---CCcHHHHHHHHHHHHHHH
Confidence 32 343 3333 566665555555555533
No 102
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=33.74 E-value=1.1e+02 Score=27.12 Aligned_cols=69 Identities=14% Similarity=0.129 Sum_probs=41.1
Q ss_pred HHHHHHHHCCCcEEEeccccccc-----CCCcccccccc--chhh-h-cCCCeEEEeccc--ccccchhhhHhHhhhCCe
Q 023717 77 ATMFFASMVGIPVFVTGGIGGVH-----RHGEHTMDISS--DLTE-L-GRTPVAVVSAGI--KSILDIPRTLEYLETHGV 145 (278)
Q Consensus 77 aTm~lA~~aGI~VFaTGGIGGVH-----rg~~~t~DiSa--DL~e-L-~rtpV~VVcaG~--KsILDi~~TLE~LET~GV 145 (278)
.++.+|+..|.+|++|..---=+ .|+...+|... |+.+ + ..-.+++-|+|. .+. +...++.|...|.
T Consensus 194 ~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~D~vid~~g~~~~~~--~~~~~~~l~~~G~ 271 (360)
T 1piw_A 194 MGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCASSLTDID--FNIMPKAMKVGGR 271 (360)
T ss_dssp HHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSCSCEEEEEECCSCSTTCC--TTTGGGGEEEEEE
T ss_pred HHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCCEEEcCcCchHHHHHhhcCCCEEEECCCCCcHHH--HHHHHHHhcCCCE
Confidence 45677888888888887432110 14444555543 3322 2 345688889987 333 3466788888775
Q ss_pred eE
Q 023717 146 CV 147 (278)
Q Consensus 146 ~V 147 (278)
-|
T Consensus 272 iv 273 (360)
T 1piw_A 272 IV 273 (360)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 103
>3n0w_A ABC branched chain amino acid family transporter, periplasmic ligand binding protein...; receptor family ligand binding region; HET: MSE; 1.88A {Burkholderia xenovorans}
Probab=33.62 E-value=1.2e+02 Score=26.47 Aligned_cols=131 Identities=11% Similarity=0.046 Sum_probs=0.0
Q ss_pred CCCchhhHHHHHHHHHHCCCcEEEecccccccCC---Cccccccccc-----------hhhhcCCCeEEEecccccccch
Q 023717 68 RGNGATTVSATMFFASMVGIPVFVTGGIGGVHRH---GEHTMDISSD-----------LTELGRTPVAVVSAGIKSILDI 133 (278)
Q Consensus 68 ~~~GaTTVaaTm~lA~~aGI~VFaTGGIGGVHrg---~~~t~DiSaD-----------L~eL~rtpV~VVcaG~KsILDi 133 (278)
+-....+..+.+-+++..+|+++.++..---..+ ....|-++.| |.+++-..|++|...--.=.+.
T Consensus 79 G~~~s~~~~a~~~~~~~~~ip~i~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~~~g~~~vaii~~~~~~g~~~ 158 (379)
T 3n0w_A 79 DVVNSGTALAINNLVKDKKKLAFITAAAADQIGGTECNGYGIGFLYNFTSIVKTVVQAQLAKGYKTWFLMLPDAAYGDLM 158 (379)
T ss_dssp ECCCHHHHHHHHHHHHHHTCEEEECSCCCTTTTTTTCCSSEEECSCCHHHHHHHHHHHHHHTTCCEEEEEEESSHHHHHH
T ss_pred cCCCcHHHHHHHHHHHHcCceEEEcCCCchhhhcccCCCcEEEEeCChHHHHHHHHHHHHHcCCcEEEEEecccchhHHH
Q ss_pred hhhHh-HhhhCCeeEEee-----cCCCCcceee--cCCCCccCcccCCHHHHHHHHHHHHhcCCCCe-EEEEeC
Q 023717 134 PRTLE-YLETHGVCVAAY-----KTNEFPAFFT--ETSGSKVPCRVDSPEDCARLIDVNMKLKLGSG-LVIGVP 198 (278)
Q Consensus 134 ~~TLE-~LET~GV~V~gy-----~t~~fPaFy~--~~Sg~~~~~r~d~~~e~A~~~~~~~~l~l~~g-~lvanP 198 (278)
-..++ .|+.+|++|+.. ++.+|..... ..++..+=+-..+..+++.++++-+++|+... +++..+
T Consensus 159 ~~~~~~~~~~~G~~v~~~~~~~~~~~d~~~~l~~i~~~~~d~v~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 232 (379)
T 3n0w_A 159 NAAIRRELTAGGGQIVGSVRFPFETQDFSSYLLQAKASGAQLIVSTSGGAANINIMKQAREFGLPSKTQKVGGM 232 (379)
T ss_dssp HHHHHHHHHHHTCEEEEEEEECTTCCCCHHHHHHHHHHTCSEEEECCCHHHHHHHHHHHHHTTCSCSSCEEECC
T ss_pred HHHHHHHHHHcCCEEEEEEeCCCCCCCHHHHHHHHHHCCCCEEEEecccchHHHHHHHHHHcCCCCCCcEEEec
No 104
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=33.60 E-value=38 Score=28.74 Aligned_cols=90 Identities=16% Similarity=0.153 Sum_probs=50.0
Q ss_pred chhhhHhHhhhCCeeEEeecCCCCcceeecCCCCccCcccCCHHHHHHHHHHHHhcCCCCeEEEEeCC-Cc------cCC
Q 023717 132 DIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPI-PR------EHA 204 (278)
Q Consensus 132 Di~~TLE~LET~GV~V~gy~t~~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~~~l~l~~g~lvanPi-P~------e~~ 204 (278)
++..-.+.|+.+|+.|.++... ++.++.... -..|-...+..-+.++....||.+. |+..|- +. ...
T Consensus 65 ~~~~~~~~l~~~gl~v~~~~~~-~~~~l~~~d---~~~r~~~~~~~~~~i~~a~~lGa~~--v~~~~g~~~~~~~~p~~~ 138 (287)
T 3kws_A 65 RVNEIKQALNGRNIKVSAICAG-FKGFILSTD---PAIRKECMDTMKEIIAAAGELGSTG--VIIVPAFNGQVPALPHTM 138 (287)
T ss_dssp GHHHHHHHHTTSSCEECEEECC-CCSCTTBSS---HHHHHHHHHHHHHHHHHHHHTTCSE--EEECSCCTTCCSBCCSSH
T ss_pred HHHHHHHHHHHcCCeEEEEecC-CCCcCCCCC---HHHHHHHHHHHHHHHHHHHHcCCCE--EEEecCcCCcCCCCCCHH
Confidence 5677788999999999887642 222111000 0011122345666777777887653 333332 11 111
Q ss_pred CChHHHHHHHHHHHHHHHHcCCC
Q 023717 205 ASGRVIESAIQSALREAREKNIT 227 (278)
Q Consensus 205 ~~~~~i~~~i~~Al~ea~~~gi~ 227 (278)
-..+.+-+.+++....|++.||+
T Consensus 139 ~~~~~~~~~l~~l~~~a~~~Gv~ 161 (287)
T 3kws_A 139 ETRDFLCEQFNEMGTFAAQHGTS 161 (287)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCE
Confidence 12334556677788889998885
No 105
>2ejc_A Pantoate--beta-alanine ligase; X-RAY diffraction, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Thermotoga maritima}
Probab=33.49 E-value=25 Score=32.15 Aligned_cols=140 Identities=16% Similarity=0.112 Sum_probs=79.1
Q ss_pred HHCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEec-------c-----cccccchhhhHhHhhhCCeeEEee
Q 023717 83 SMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSA-------G-----IKSILDIPRTLEYLETHGVCVAAY 150 (278)
Q Consensus 83 ~~aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVca-------G-----~KsILDi~~TLE~LET~GV~V~gy 150 (278)
+..|=+|..+|=+||+|+|-..=+ .-..+.++ .+||+= + .+.+-++..-+|.||..||-.+=.
T Consensus 18 r~~g~~V~~vgtfdgLH~GH~sLI---~~A~~~ad--~vVVSffvnP~qf~~~ed~~~yp~tle~d~~lL~~~GVD~vf~ 92 (280)
T 2ejc_A 18 REKKKTIGFVPTMGYLHEGHLSLV---RRARAEND--VVVVSIFVNPTQFGPNEDYERYPRDFERDRKLLEKENVDCIFH 92 (280)
T ss_dssp HHTTCCEEEEEECSCCCHHHHHHH---HHHHHHSS--EEEEEECCCGGGCCTTSCGGGSCCCHHHHHHHHHTTTCSEEEC
T ss_pred HhcCCEEEEEcCCccccHHHHHHH---HHHHHhCC--EEEEEEeCChHHhcCCcccccCCCCHHHHHHHHHHCCCCEEEe
Confidence 345767878899999999943322 22233333 566664 1 345667777889999999987632
Q ss_pred cC--CCCcc-ee---ecCCCCcc----------------------------Ccc--cCCHHHHHHHHHHHHhcCCCCeEE
Q 023717 151 KT--NEFPA-FF---TETSGSKV----------------------------PCR--VDSPEDCARLIDVNMKLKLGSGLV 194 (278)
Q Consensus 151 ~t--~~fPa-Fy---~~~Sg~~~----------------------------~~r--~d~~~e~A~~~~~~~~l~l~~g~l 194 (278)
-+ +-.|. |- ... ++.- .++ -.+..+++-+-+.-.+|+++--++
T Consensus 93 p~~~~m~p~~f~~~v~~~-~~~~~l~G~~rp~hF~Gv~tvv~kLf~iv~p~~~~FG~kd~qq~~~l~~~~~dl~~~v~iv 171 (280)
T 2ejc_A 93 PSVEEMYPPDFSTYVEET-KLSKHLCGRSRPGHFRGVCTVVTKLFNIVKPHRAYFGQKDAQQFRVLRRMVRDLNMDVEMI 171 (280)
T ss_dssp CCHHHHSCTTCCCCCCCC-SGGGTTTGGGSTTHHHHHHHHHHHHHHHHCCSEEEEEGGGHHHHHHHHHHHHHTTCCCEEE
T ss_pred CCHHHCCCcCceEEEEcC-CcceEEecCCCCCeecceEEEEeeeceeccCceEEeCCCCCcCHHHHHHHHHHcCCeEEEE
Confidence 21 11221 21 111 1110 111 136677777777888899876654
Q ss_pred EEeCCC--ccCCCC-------hHH--HHHHHHHHHHHHHHcCCCC
Q 023717 195 IGVPIP--REHAAS-------GRV--IESAIQSALREAREKNITG 228 (278)
Q Consensus 195 vanPiP--~e~~~~-------~~~--i~~~i~~Al~ea~~~gi~G 228 (278)
.+-++- ...+++ +++ .-..|.+||+++++.--.|
T Consensus 172 ~vp~vr~~dGlaiSSrn~yLs~~er~~A~~l~~~L~~~~~~~~~g 216 (280)
T 2ejc_A 172 ECPIVREPDGLAMSSRNVYLSPEERQQALSLYQSLKIAENLYLNG 216 (280)
T ss_dssp EECCCBCTTSCBCCGGGGGCCHHHHHHTHHHHHHHHHHHHHHHTT
T ss_pred eeCcEEcCCCCEeccCcccCCHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 455552 333443 233 4456777887776543344
No 106
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=33.40 E-value=1.1e+02 Score=26.14 Aligned_cols=66 Identities=21% Similarity=0.184 Sum_probs=33.6
Q ss_pred HHHHHHHHCCCcccEEEEEcCceeecCCHHHHHHHHhcCCCcccccccchHHHHhcCCCchhhHHHHHHHHHHC-CCcEE
Q 023717 12 EVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMV-GIPVF 90 (278)
Q Consensus 12 ~~E~~vR~~GavPATIaii~G~i~VGl~~~el~~la~~~~~~~K~srRDl~~~~a~~~~GaTTVaaTm~lA~~a-GI~VF 90 (278)
.+.+..|+.| +|..++ -.|.+|+..-.+.+-+..|+ .| ....||. ..--.+.... .||++
T Consensus 100 ~v~~~~~~~g-~~~i~G--------~~t~~e~~~A~~~Gad~v~~----Fp----a~~~gG~--~~lk~i~~~~~~ipvv 160 (214)
T 1wbh_A 100 PLLKAATEGT-IPLIPG--------ISTVSELMLGMDYGLKEFKF----FP----AEANGGV--KALQAIAGPFSQVRFC 160 (214)
T ss_dssp HHHHHHHHSS-SCEEEE--------ESSHHHHHHHHHTTCCEEEE----TT----TTTTTHH--HHHHHHHTTCTTCEEE
T ss_pred HHHHHHHHhC-CCEEEe--------cCCHHHHHHHHHCCCCEEEE----ec----CccccCH--HHHHHHhhhCCCCeEE
Confidence 3445555666 333332 24566765554444456666 33 1122331 1112234445 79999
Q ss_pred Eecccc
Q 023717 91 VTGGIG 96 (278)
Q Consensus 91 aTGGIG 96 (278)
+||||.
T Consensus 161 aiGGI~ 166 (214)
T 1wbh_A 161 PTGGIS 166 (214)
T ss_dssp EBSSCC
T ss_pred EECCCC
Confidence 998884
No 107
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=33.18 E-value=46 Score=29.16 Aligned_cols=71 Identities=15% Similarity=0.150 Sum_probs=41.6
Q ss_pred HHHHHHHHCCCcEEEeccccc----ccCCCcccccccc-c-hhh-hcCCCeEEEecccccccchhhhHhHhhhCCeeEEe
Q 023717 77 ATMFFASMVGIPVFVTGGIGG----VHRHGEHTMDISS-D-LTE-LGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAA 149 (278)
Q Consensus 77 aTm~lA~~aGI~VFaTGGIGG----VHrg~~~t~DiSa-D-L~e-L~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~g 149 (278)
.++.+|+..|.+|++|..--- -..|+...+|.+. | +.+ +..-.+++=|+|..+. ...++.|...|.-|.
T Consensus 168 ~a~q~a~~~Ga~vi~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~g~D~v~d~~g~~~~---~~~~~~l~~~G~iv~- 243 (321)
T 3tqh_A 168 LAIQLAKQKGTTVITTASKRNHAFLKALGAEQCINYHEEDFLLAISTPVDAVIDLVGGDVG---IQSIDCLKETGCIVS- 243 (321)
T ss_dssp HHHHHHHHTTCEEEEEECHHHHHHHHHHTCSEEEETTTSCHHHHCCSCEEEEEESSCHHHH---HHHGGGEEEEEEEEE-
T ss_pred HHHHHHHHcCCEEEEEeccchHHHHHHcCCCEEEeCCCcchhhhhccCCCEEEECCCcHHH---HHHHHhccCCCEEEE-
Confidence 345677888888888752110 0014444555433 2 222 3445678888887664 677888888885443
Q ss_pred ec
Q 023717 150 YK 151 (278)
Q Consensus 150 y~ 151 (278)
++
T Consensus 244 ~g 245 (321)
T 3tqh_A 244 VP 245 (321)
T ss_dssp CC
T ss_pred eC
Confidence 54
No 108
>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus}
Probab=33.03 E-value=99 Score=28.33 Aligned_cols=48 Identities=8% Similarity=0.005 Sum_probs=23.5
Q ss_pred hhHhHhhhCCeeEEeecC-------C-CCcceeecCCCCcc-Cc---ccCCHHHHHHHHH
Q 023717 135 RTLEYLETHGVCVAAYKT-------N-EFPAFFTETSGSKV-PC---RVDSPEDCARLID 182 (278)
Q Consensus 135 ~TLE~LET~GV~V~gy~t-------~-~fPaFy~~~Sg~~~-~~---r~d~~~e~A~~~~ 182 (278)
...+.||..|+|++|-.. | .+--=+..+.|+++ |+ .+++++++.+.+.
T Consensus 89 ~~~~~~~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~~~~~~~~~~~~~~~ 148 (451)
T 2vpq_A 89 DFAELCEACQLKFIGPSYQSIQKMGIKDVAKAEMIKANVPVVPGSDGLMKDVSEAKKIAK 148 (451)
T ss_dssp HHHHHHHTTTCEESSSCHHHHHHHHSHHHHHHHHHHTTCCBCSBCSSCBSCHHHHHHHHH
T ss_pred HHHHHHHHcCCeEECCCHHHHHHhcCHHHHHHHHHHcCCCcCCCcccCcCCHHHHHHHHH
Confidence 345666667776655211 1 11111233456665 32 3667777655543
No 109
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=33.01 E-value=1.2e+02 Score=25.52 Aligned_cols=48 Identities=27% Similarity=0.321 Sum_probs=27.5
Q ss_pred CHHHHHHHHhcCCCcccccccchHHHHhcCCCchhhHHHHHHHHHHC-CCcEEEecccc
Q 023717 39 STEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMV-GIPVFVTGGIG 96 (278)
Q Consensus 39 ~~~el~~la~~~~~~~K~srRDl~~~~a~~~~GaTTVaaTm~lA~~a-GI~VFaTGGIG 96 (278)
|.+|+.+-.+.+-+..|+ .| + ...||. +.--.+.... .|||+++|||.
T Consensus 113 t~~e~~~A~~~Gad~v~~----fp---a-~~~gG~--~~lk~l~~~~~~ipvvaiGGI~ 161 (207)
T 2yw3_A 113 TPTEVERALALGLSALKF----FP---A-EPFQGV--RVLRAYAEVFPEVRFLPTGGIK 161 (207)
T ss_dssp SHHHHHHHHHTTCCEEEE----TT---T-TTTTHH--HHHHHHHHHCTTCEEEEBSSCC
T ss_pred CHHHHHHHHHCCCCEEEE----ec---C-ccccCH--HHHHHHHhhCCCCcEEEeCCCC
Confidence 577776655544566777 23 1 223332 2222344455 89999999885
No 110
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=32.76 E-value=1.8e+02 Score=22.86 Aligned_cols=13 Identities=15% Similarity=0.429 Sum_probs=10.8
Q ss_pred cEEEecccccccC
Q 023717 88 PVFVTGGIGGVHR 100 (278)
Q Consensus 88 ~VFaTGGIGGVHr 100 (278)
+|++|||-||+-+
T Consensus 5 ~vlVtGasg~iG~ 17 (202)
T 3d7l_A 5 KILLIGASGTLGS 17 (202)
T ss_dssp EEEEETTTSHHHH
T ss_pred EEEEEcCCcHHHH
Confidence 6899999999844
No 111
>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A
Probab=32.73 E-value=58 Score=24.04 Aligned_cols=46 Identities=22% Similarity=0.267 Sum_probs=31.6
Q ss_pred chhhhHhHhhhCCeeEEeecCCCCcceeecC-CCCccCcccCCHHHH
Q 023717 132 DIPRTLEYLETHGVCVAAYKTNEFPAFFTET-SGSKVPCRVDSPEDC 177 (278)
Q Consensus 132 Di~~TLE~LET~GV~V~gy~t~~fPaFy~~~-Sg~~~~~r~d~~~e~ 177 (278)
|+.++.+.|+.+|+++..-.....-.||.++ .|..+........+.
T Consensus 73 d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~ 119 (135)
T 1nki_A 73 DFARFAAQLRAHGVREWKQNRSEGDSFYFLDPDGHRLEAHVGDLRSR 119 (135)
T ss_dssp HHHHHHHHHHHTTCCEEECCCSSSCEEEEECTTCCEEEEESCCHHHH
T ss_pred HHHHHHHHHHHCCCceecCCCCCeEEEEEECCCCCEEEEEECCchHH
Confidence 8999999999999999864332223444444 677777666655443
No 112
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=32.69 E-value=1.5e+02 Score=24.93 Aligned_cols=104 Identities=17% Similarity=0.231 Sum_probs=52.5
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccc-----------cccchhhhHhHhhhCCeeEEeecC
Q 023717 84 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIK-----------SILDIPRTLEYLETHGVCVAAYKT 152 (278)
Q Consensus 84 ~aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~K-----------sILDi~~TLE~LET~GV~V~gy~t 152 (278)
+.|=.|++|||-||+-+ -+..-|.+-+ .-|+..+-. +-=.+..+.+.++..|..+..+.
T Consensus 11 l~gk~vlVTGas~gIG~------~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 80 (278)
T 3sx2_A 11 LTGKVAFITGAARGQGR------AHAVRLAADG---ADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQ- 80 (278)
T ss_dssp TTTCEEEEESTTSHHHH------HHHHHHHHTT---CEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEE-
T ss_pred CCCCEEEEECCCChHHH------HHHHHHHHCC---CeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEe-
Confidence 45667999999999944 3444443333 223332211 11233445555666555444332
Q ss_pred CCCcceeecCCCCccCcccCCHHHHHHHHHHH-HhcCCCCeEEEEeCCCccCCCChHHHHHHH
Q 023717 153 NEFPAFFTETSGSKVPCRVDSPEDCARLIDVN-MKLKLGSGLVIGVPIPREHAASGRVIESAI 214 (278)
Q Consensus 153 ~~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~-~~l~l~~g~lvanPiP~e~~~~~~~i~~~i 214 (278)
.-+.+++++.+++..- ..+| +--+||.|.=......+.+.+++.+
T Consensus 81 ----------------~D~~~~~~v~~~~~~~~~~~g-~id~lv~nAg~~~~~~~~~~~~~~~ 126 (278)
T 3sx2_A 81 ----------------ADVRDRESLSAALQAGLDELG-RLDIVVANAGIAPMSAGDDGWHDVI 126 (278)
T ss_dssp ----------------CCTTCHHHHHHHHHHHHHHHC-CCCEEEECCCCCCCSSTHHHHHHHH
T ss_pred ----------------CCCCCHHHHHHHHHHHHHHcC-CCCEEEECCCCCCCCCCHHHHHHHH
Confidence 3456777777777643 3344 2235666632222222455555544
No 113
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=32.62 E-value=88 Score=30.70 Aligned_cols=135 Identities=12% Similarity=0.115 Sum_probs=79.1
Q ss_pred HHHHHHHHHHCCCcccEEEEEcCceee----cCCHHHHHHHHhcCCCcccccccchHHHHhcCCCchhhHHHHHHHHHHC
Q 023717 10 AKEVEAIVRNNGAVPATIAILEGLPCV----GLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMV 85 (278)
Q Consensus 10 A~~~E~~vR~~GavPATIaii~G~i~V----Gl~~~el~~la~~~~~~~K~srRDl~~~~a~~~~GaTTVaaTm~lA~~a 85 (278)
+..+-+.+.+.||. .|+|.|..=.| |++.++|+.|.+.+. ..+-+-.+++ ....|++.++.--++ ..
T Consensus 264 G~~~a~~L~~~Gak--vVavsD~~G~i~dp~Gid~edl~~l~~~k~-~~~g~v~~~~----~~~~~a~~v~~~~~~--~~ 334 (470)
T 2bma_A 264 ALYCVQKLLHLNVK--VLTLSDSNGYVYEPNGFTHENLEFLIDLKE-EKKGRIKEYL----NHSSTAKYFPNEKPW--GV 334 (470)
T ss_dssp HHHHHHHHHHTTCE--ECEEEETTEEEECSSCCCHHHHHHHHHHHT-TTTCCGGGGG----GTCSSCEECSSCCTT--SS
T ss_pred HHHHHHHHHHCCCE--EEEEEeCCceEECCCCCCHHHHHHHHHHHH-hcCCcHHHHH----hhcCCcEEecCcCee--ec
Confidence 33344455567876 44555433223 888999988865321 1101112221 111244444311111 45
Q ss_pred CCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecCCCCcceeecCCCC
Q 023717 86 GIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGS 165 (278)
Q Consensus 86 GI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy~~~Sg~ 165 (278)
..+||+-|+++++=-. .+...|-...+-+||=|+.-=+.-.+ -+.|+..||.++ |.|+...-|+
T Consensus 335 ~~DI~iPcA~~~~I~~--------~na~~l~~~~ak~V~EgAN~p~T~eA-~~~L~~rGIl~~-------PD~~aNAGGV 398 (470)
T 2bma_A 335 PCTLAFPCATQNDVDL--------DQAKLLQKNGCILVGEGANMPSTVDA-INLFKSNNIIYC-------PSKAANAGGV 398 (470)
T ss_dssp CCSEEEECSSTTCBCS--------HHHHHHHHTTCCEEECCSSSCBCHHH-HHHHHHTTCEEE-------CHHHHTTHHH
T ss_pred CccEEEeccccCcCCH--------HHHHHHHhcCcEEEEeCCCCCCCHHH-HHHHHHCCcEEE-------ChHHhhCCCc
Confidence 7789999998875332 12333432355678888877675555 789999999988 9999999888
Q ss_pred ccCc
Q 023717 166 KVPC 169 (278)
Q Consensus 166 ~~~~ 169 (278)
-+.|
T Consensus 399 ~~S~ 402 (470)
T 2bma_A 399 AISG 402 (470)
T ss_dssp HHHH
T ss_pred eeeH
Confidence 7754
No 114
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=32.52 E-value=1.6e+02 Score=25.03 Aligned_cols=104 Identities=14% Similarity=0.135 Sum_probs=57.0
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecCCCCcceeecCC
Q 023717 84 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETS 163 (278)
Q Consensus 84 ~aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy~~~S 163 (278)
+.|=.+++|||-||+-+ -+..-|.+-+ .-|+..+- +-=.+..+.+.|+..|..+..+
T Consensus 24 l~gk~~lVTGas~gIG~------aia~~la~~G---~~V~~~~r-~~~~~~~~~~~l~~~~~~~~~~------------- 80 (271)
T 4ibo_A 24 LGGRTALVTGSSRGLGR------AMAEGLAVAG---ARILINGT-DPSRVAQTVQEFRNVGHDAEAV------------- 80 (271)
T ss_dssp CTTCEEEETTCSSHHHH------HHHHHHHHTT---CEEEECCS-CHHHHHHHHHHHHHTTCCEEEC-------------
T ss_pred CCCCEEEEeCCCcHHHH------HHHHHHHHCC---CEEEEEeC-CHHHHHHHHHHHHhcCCceEEE-------------
Confidence 55667999999999944 4554444443 23333332 2223455666776666444322
Q ss_pred CCccCcccCCHHHHHHHHHHHH-hcCCCCeEEEEeCC----CccCCCChHHHHHHHH
Q 023717 164 GSKVPCRVDSPEDCARLIDVNM-KLKLGSGLVIGVPI----PREHAASGRVIESAIQ 215 (278)
Q Consensus 164 g~~~~~r~d~~~e~A~~~~~~~-~l~l~~g~lvanPi----P~e~~~~~~~i~~~i~ 215 (278)
+.-+.+++++.+++..-. ++| +--+||.|.= ..-..++.+++++.++
T Consensus 81 ----~~Dv~d~~~v~~~~~~~~~~~g-~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 132 (271)
T 4ibo_A 81 ----AFDVTSESEIIEAFARLDEQGI-DVDILVNNAGIQFRKPMIELETADWQRVID 132 (271)
T ss_dssp ----CCCTTCHHHHHHHHHHHHHHTC-CCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred ----EcCCCCHHHHHHHHHHHHHHCC-CCCEEEECCCCCCCCCchhCCHHHHHHHHH
Confidence 234667888887776433 333 3345665531 1122456776666543
No 115
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=32.28 E-value=88 Score=27.55 Aligned_cols=139 Identities=14% Similarity=0.117 Sum_probs=71.4
Q ss_pred HHHHHHHHC-CCcEEEeccccccc-----CCCccccccccc----hhhhc---CCCeEEEecccccccchhhhHhHhhhC
Q 023717 77 ATMFFASMV-GIPVFVTGGIGGVH-----RHGEHTMDISSD----LTELG---RTPVAVVSAGIKSILDIPRTLEYLETH 143 (278)
Q Consensus 77 aTm~lA~~a-GI~VFaTGGIGGVH-----rg~~~t~DiSaD----L~eL~---rtpV~VVcaG~KsILDi~~TLE~LET~ 143 (278)
.++.+|+.. |.+|++|..---=+ .|+...+|-..| +.++. .-.+++-|+|..+. +...++.|...
T Consensus 186 ~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~v~~~t~g~g~d~v~d~~G~~~~--~~~~~~~l~~~ 263 (345)
T 3jv7_A 186 VGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGAGAADAIRELTGGQGATAVFDFVGAQST--IDTAQQVVAVD 263 (345)
T ss_dssp HHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECSTTHHHHHHHHHGGGCEEEEEESSCCHHH--HHHHHHHEEEE
T ss_pred HHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCCCcHHHHHHHHhCCCCCeEEEECCCCHHH--HHHHHHHHhcC
Confidence 446667766 78899886421100 134444444333 33443 35688889998754 35677788887
Q ss_pred CeeEE-eecCC---CCcceeecCCCCccC-cccCCHHHHHHHHHHHHhcCCCCeEEEEeCCCccCCCChHHHHHHHHHHH
Q 023717 144 GVCVA-AYKTN---EFPAFFTETSGSKVP-CRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSAL 218 (278)
Q Consensus 144 GV~V~-gy~t~---~fPaFy~~~Sg~~~~-~r~d~~~e~A~~~~~~~~l~l~~g~lvanPiP~e~~~~~~~i~~~i~~Al 218 (278)
|.-|. |.... .+| |..-..+..+- ..+.+.++..++++.-.+=.++ |+...+.+++ +.+|+
T Consensus 264 G~iv~~G~~~~~~~~~~-~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~-------~~~~~~~l~~------~~~A~ 329 (345)
T 3jv7_A 264 GHISVVGIHAGAHAKVG-FFMIPFGASVVTPYWGTRSELMEVVALARAGRLD-------IHTETFTLDE------GPAAY 329 (345)
T ss_dssp EEEEECSCCTTCCEEES-TTTSCTTCEEECCCSCCHHHHHHHHHHHHTTCCC-------CCEEEECSTT------HHHHH
T ss_pred CEEEEECCCCCCCCCcC-HHHHhCCCEEEEEecCCHHHHHHHHHHHHcCCCc-------eEEEEEcHHH------HHHHH
Confidence 76543 33222 223 11111122221 1234555655555543332333 2234444443 55677
Q ss_pred HHHHHcCCCCccC
Q 023717 219 REAREKNITGNAE 231 (278)
Q Consensus 219 ~ea~~~gi~Gk~v 231 (278)
+..++....||-|
T Consensus 330 ~~~~~~~~~Gkvv 342 (345)
T 3jv7_A 330 RRLREGSIRGRGV 342 (345)
T ss_dssp HHHHHTCCSSEEE
T ss_pred HHHHcCCCceeEE
Confidence 7777777788753
No 116
>3j20_B 30S ribosomal protein S2P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=32.24 E-value=47 Score=29.03 Aligned_cols=75 Identities=23% Similarity=0.252 Sum_probs=44.4
Q ss_pred cccchhhhHhHhhh----------CCeeEEeecCC----------CCcceeecCCCCccCcccCCHHHHHHHHHHHHhcC
Q 023717 129 SILDIPRTLEYLET----------HGVCVAAYKTN----------EFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLK 188 (278)
Q Consensus 129 sILDi~~TLE~LET----------~GV~V~gy~t~----------~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~~~l~ 188 (278)
.|+|+.+|+|+|.. .-|.+||-+.. .+-+||. .+..+|+.+.+.. ..++-
T Consensus 41 ~IIdL~kT~~~L~~A~~~i~~~~~~~ilfV~tk~~~~~~V~k~A~~~g~~~v--~~rw~gG~lTN~~--------~~~~~ 110 (202)
T 3j20_B 41 YVLDVRKTDERLKVAGKFLAKFEPQSILAVSVRLYGQKPVKKFGEVTGARAI--PGRFLPGTMTNPA--------VKNFF 110 (202)
T ss_dssp EEECHHHHHHHHHHHHHHHHHSCSSCEEEECCCTTTHHHHHHHHHHHSCCCC--CSSCCSSSSSCSS--------SSSCC
T ss_pred EEECHHHHHHHHHHHHHHHHhhCCCeEEEEecChHHHHHHHHHHHHHCCcee--CceecCCCcccHh--------HHhcc
Confidence 69999999999853 23666665421 1112332 2333444443332 12345
Q ss_pred CCCeEEEEeCCCccCCCChHHHHHHHHHHHHHHHHcCC
Q 023717 189 LGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNI 226 (278)
Q Consensus 189 l~~g~lvanPiP~e~~~~~~~i~~~i~~Al~ea~~~gi 226 (278)
+|.-++|.+|--+ .+|+.||...||
T Consensus 111 ~Pdllvv~Dp~~d-------------~~ai~EA~~l~I 135 (202)
T 3j20_B 111 EPDVLIVTDPRAD-------------HQAMREAVEIGI 135 (202)
T ss_dssp CCSEEEESCTTTS-------------HHHHHHHHHHTC
T ss_pred CCCeEEEeCCccc-------------hHHHHHHHHcCC
Confidence 7888888887322 478889998888
No 117
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=32.16 E-value=1.7e+02 Score=23.99 Aligned_cols=104 Identities=15% Similarity=0.162 Sum_probs=51.2
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecCCCCcceeecCC
Q 023717 84 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETS 163 (278)
Q Consensus 84 ~aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy~~~S 163 (278)
+.|=.|++|||-||+-+ -+..-|.+-+ ..|++++--.. ......+.|+..|..+..
T Consensus 11 l~~k~vlItGasggiG~------~la~~l~~~G-~~V~~~~r~~~---~~~~~~~~l~~~~~~~~~-------------- 66 (260)
T 3awd_A 11 LDNRVAIVTGGAQNIGL------ACVTALAEAG-ARVIIADLDEA---MATKAVEDLRMEGHDVSS-------------- 66 (260)
T ss_dssp CTTCEEEEETTTSHHHH------HHHHHHHHTT-CEEEEEESCHH---HHHHHHHHHHHTTCCEEE--------------
T ss_pred CCCCEEEEeCCCchHHH------HHHHHHHHCC-CEEEEEeCCHH---HHHHHHHHHHhcCCceEE--------------
Confidence 34566999999999944 3444444443 23444432211 233445556555432211
Q ss_pred CCccCcccCCHHHHHHHHHHH-HhcCCCCeEEEEeC-CC----ccCCCChHHHHHHHH
Q 023717 164 GSKVPCRVDSPEDCARLIDVN-MKLKLGSGLVIGVP-IP----REHAASGRVIESAIQ 215 (278)
Q Consensus 164 g~~~~~r~d~~~e~A~~~~~~-~~l~l~~g~lvanP-iP----~e~~~~~~~i~~~i~ 215 (278)
++..+.+++++.+++..- ..++-.. +||.|. +. .-...+.+..++.++
T Consensus 67 ---~~~D~~~~~~~~~~~~~~~~~~~~id-~vi~~Ag~~~~~~~~~~~~~~~~~~~~~ 120 (260)
T 3awd_A 67 ---VVMDVTNTESVQNAVRSVHEQEGRVD-ILVACAGICISEVKAEDMTDGQWLKQVD 120 (260)
T ss_dssp ---EECCTTCHHHHHHHHHHHHHHHSCCC-EEEECCCCCCCSCCTTTCCHHHHHHHHH
T ss_pred ---EEecCCCHHHHHHHHHHHHHHcCCCC-EEEECCCCCCCCCCcccCCHHHHHHHHH
Confidence 223455777777776532 2333222 445442 11 123456666665443
No 118
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=32.06 E-value=2e+02 Score=26.46 Aligned_cols=157 Identities=14% Similarity=0.088 Sum_probs=87.2
Q ss_pred HHHHHHHHCCCcEEEec--ccccccCCCccccccccc-----hhhhcC-----CCeEE-EecccccccchhhhHhHhhhC
Q 023717 77 ATMFFASMVGIPVFVTG--GIGGVHRHGEHTMDISSD-----LTELGR-----TPVAV-VSAGIKSILDIPRTLEYLETH 143 (278)
Q Consensus 77 aTm~lA~~aGI~VFaTG--GIGGVHrg~~~t~DiSaD-----L~eL~r-----tpV~V-VcaG~KsILDi~~TLE~LET~ 143 (278)
.+..++..+|++...++ +++-+..|-..+--++-| ...+.| .||++ .=.|--+-+++-+|...|+..
T Consensus 36 ~sA~l~e~aGf~ai~vsG~~~a~s~~G~pD~~~vt~~em~~~~~~i~r~~~~~~PviaD~d~Gyg~~~~v~~~v~~l~~a 115 (307)
T 3lye_A 36 LSARTAMELGFKSLYMTGAGTTASRLGQPDLAIAQLHDMRDNADMIANLDPFGPPLIADMDTGYGGPIMVARTVEHYIRS 115 (307)
T ss_dssp HHHHHHHHTTCSCEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHTSSTTSCCEEEECTTCSSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCEEEeccHHHHHHhcCCCCCCCCCHHHHHHHHHhhhccCCCCCcEEEECCCCCCCHHHHHHHHHHHHHc
Confidence 55677889999998874 466665565443333322 222333 56544 234433567888999999999
Q ss_pred CeeEEeecCCCCcceeecCCCCccCcccCCHHHHHHHHHHH----HhcCCCCeEEEEeCCCccCCCChHHHHHHHHHHHH
Q 023717 144 GVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVN----MKLKLGSGLVIGVPIPREHAASGRVIESAIQSALR 219 (278)
Q Consensus 144 GV~V~gy~t~~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~----~~l~l~~g~lvanPiP~e~~~~~~~i~~~i~~Al~ 219 (278)
|+-=+-.....+|- .-|+.-...+-+.+|.++-|++- ..++ +.-+|++.= ++.-..-++++|++|.+
T Consensus 116 Gaagv~iEDq~~~k----~cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~-~d~~I~ART----Da~~~~gldeAi~Ra~a 186 (307)
T 3lye_A 116 GVAGAHLEDQILTK----RCGHLSGKKVVSRDEYLVRIRAAVATKRRLR-SDFVLIART----DALQSLGYEECIERLRA 186 (307)
T ss_dssp TCCEEEECCBCCCC------------CBCCHHHHHHHHHHHHHHHHHTT-CCCEEEEEE----CCHHHHCHHHHHHHHHH
T ss_pred CCeEEEEcCCCCCc----ccCCCCCCeecCHHHHHHHHHHHHHHHHhcC-CCeEEEEec----hhhhccCHHHHHHHHHH
Confidence 98766665555542 22222223566777765555432 2334 445666653 12223457788888766
Q ss_pred HHHHcCC-----CCccCChHHHHHHHHHhC
Q 023717 220 EAREKNI-----TGNAETPFLLARVNELTG 244 (278)
Q Consensus 220 ea~~~gi-----~Gk~vTPflL~~i~elT~ 244 (278)
..+ .|- .|. -+|-.++++.+...
T Consensus 187 y~e-AGAD~ifi~~~-~~~~~~~~i~~~~~ 214 (307)
T 3lye_A 187 ARD-EGADVGLLEGF-RSKEQAAAAVAALA 214 (307)
T ss_dssp HHH-TTCSEEEECCC-SCHHHHHHHHHHHT
T ss_pred HHH-CCCCEEEecCC-CCHHHHHHHHHHcc
Confidence 554 343 233 25666666666544
No 119
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=31.93 E-value=74 Score=28.36 Aligned_cols=12 Identities=25% Similarity=0.266 Sum_probs=10.0
Q ss_pred CCCeEEEecccc
Q 023717 117 RTPVAVVSAGIK 128 (278)
Q Consensus 117 rtpV~VVcaG~K 128 (278)
...++|+|.|.+
T Consensus 66 ~~d~vV~Spgi~ 77 (326)
T 3eag_A 66 KADVYVIGNVAK 77 (326)
T ss_dssp CCSEEEECTTCC
T ss_pred CCCEEEECCCcC
Confidence 567899999985
No 120
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=31.86 E-value=2.1e+02 Score=23.27 Aligned_cols=23 Identities=22% Similarity=0.421 Sum_probs=15.7
Q ss_pred cEEEecccccccCCCccccccccchhhhc
Q 023717 88 PVFVTGGIGGVHRHGEHTMDISSDLTELG 116 (278)
Q Consensus 88 ~VFaTGGIGGVHrg~~~t~DiSaDL~eL~ 116 (278)
.|++|||-||+-+ -+..-|.+-+
T Consensus 4 ~vlITGasggiG~------~la~~l~~~G 26 (244)
T 2bd0_A 4 ILLITGAGKGIGR------AIALEFARAA 26 (244)
T ss_dssp EEEEETTTSHHHH------HHHHHHHHHT
T ss_pred EEEEECCCChHHH------HHHHHHHHhc
Confidence 4899999999844 4454454444
No 121
>1ulz_A Pyruvate carboxylase N-terminal domain; biotin carboxylase; 2.20A {Aquifex aeolicus} SCOP: b.84.2.1 c.30.1.1 d.142.1.2
Probab=31.32 E-value=70 Score=29.36 Aligned_cols=15 Identities=27% Similarity=0.237 Sum_probs=8.0
Q ss_pred hHHHHHHHHHHHHHH
Q 023717 207 GRVIESAIQSALREA 221 (278)
Q Consensus 207 ~~~i~~~i~~Al~ea 221 (278)
.++++++++++.+++
T Consensus 173 ~~el~~~~~~~~~~~ 187 (451)
T 1ulz_A 173 EEELVKNYEQASREA 187 (451)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 455555555555443
No 122
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=31.19 E-value=1.4e+02 Score=26.93 Aligned_cols=74 Identities=14% Similarity=0.169 Sum_probs=43.4
Q ss_pred hhhHHHHHHHHHHCCCcEEEeccccc----------ccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhh
Q 023717 72 ATTVSATMFFASMVGIPVFVTGGIGG----------VHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLE 141 (278)
Q Consensus 72 aTTVaaTm~lA~~aGI~VFaTGGIGG----------VHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LE 141 (278)
.+|+ -....|..+|++.++.++-|| .|+.+ -+++.=.++.+..+.|| +.+-|+.+--|+-+-|.
T Consensus 157 v~s~-e~A~~a~~aGad~Ivvs~hgG~~~~~~~~~~~g~~g-~~~~~l~~v~~~~~ipV-Ia~GGI~~g~Dv~kala--- 230 (336)
T 1ypf_A 157 VGTP-EAVRELENAGADATKVGIGPGKVCITKIKTGFGTGG-WQLAALRWCAKAASKPI-IADGGIRTNGDVAKSIR--- 230 (336)
T ss_dssp ECSH-HHHHHHHHHTCSEEEECSSCSTTCHHHHHHSCSSTT-CHHHHHHHHHHTCSSCE-EEESCCCSTHHHHHHHH---
T ss_pred cCCH-HHHHHHHHcCCCEEEEecCCCceeecccccCcCCch-hHHHHHHHHHHHcCCcE-EEeCCCCCHHHHHHHHH---
Confidence 4555 456777888999888865443 22110 02332233333335564 34678888888887765
Q ss_pred hCCeeEEeecC
Q 023717 142 THGVCVAAYKT 152 (278)
Q Consensus 142 T~GV~V~gy~t 152 (278)
.|...+..++
T Consensus 231 -lGAdaV~iGr 240 (336)
T 1ypf_A 231 -FGATMVMIGS 240 (336)
T ss_dssp -TTCSEEEESG
T ss_pred -cCCCEEEeCh
Confidence 3777777664
No 123
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=31.13 E-value=2.3e+02 Score=25.39 Aligned_cols=108 Identities=14% Similarity=0.231 Sum_probs=58.6
Q ss_pred HHCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEeccccccc----chhhhHhHhhhCCeeEEeecCCCCcce
Q 023717 83 SMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSIL----DIPRTLEYLETHGVCVAAYKTNEFPAF 158 (278)
Q Consensus 83 ~~aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsIL----Di~~TLE~LET~GV~V~gy~t~~fPaF 158 (278)
.+.|=.|++|||-||+-+ -+..-|.+-+- .|++++--...-- .+..+.+.++..|..+..+.
T Consensus 42 ~l~gk~vlVTGas~GIG~------aia~~La~~Ga-~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~------- 107 (346)
T 3kvo_A 42 RLAGCTVFITGASRGIGK------AIALKAAKDGA-NIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCI------- 107 (346)
T ss_dssp TTTTCEEEEETTTSHHHH------HHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEE-------
T ss_pred CCCCCEEEEeCCChHHHH------HHHHHHHHCCC-EEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEE-------
Confidence 356777999999999944 34444444332 3444433222211 24456677777776655332
Q ss_pred eecCCCCccCcccCCHHHHHHHHHHH-HhcCCCCeEEEEeCC----CccCCCChHHHHHHHH
Q 023717 159 FTETSGSKVPCRVDSPEDCARLIDVN-MKLKLGSGLVIGVPI----PREHAASGRVIESAIQ 215 (278)
Q Consensus 159 y~~~Sg~~~~~r~d~~~e~A~~~~~~-~~l~l~~g~lvanPi----P~e~~~~~~~i~~~i~ 215 (278)
.-+.+++++.+++..- .++| +--+||.|.= ..-..++.+.+++.++
T Consensus 108 ----------~Dv~d~~~v~~~~~~~~~~~g-~iDilVnnAG~~~~~~~~~~~~~~~~~~~~ 158 (346)
T 3kvo_A 108 ----------VDVRDEQQISAAVEKAIKKFG-GIDILVNNASAISLTNTLDTPTKRLDLMMN 158 (346)
T ss_dssp ----------CCTTCHHHHHHHHHHHHHHHS-CCCEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred ----------ccCCCHHHHHHHHHHHHHHcC-CCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 2455777777777643 3344 2234555421 1223466677766554
No 124
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=31.01 E-value=1.9e+02 Score=24.38 Aligned_cols=108 Identities=14% Similarity=0.177 Sum_probs=56.3
Q ss_pred HHCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecc----------cccccchhhhHhHhhhCCeeEEeecC
Q 023717 83 SMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAG----------IKSILDIPRTLEYLETHGVCVAAYKT 152 (278)
Q Consensus 83 ~~aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG----------~KsILDi~~TLE~LET~GV~V~gy~t 152 (278)
.+.|=.+++|||-||+-+ -+..-|.+-+- .|++++-- ..+-=++..+.+.++..|..+..+.
T Consensus 8 ~l~~k~~lVTGas~GIG~------a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 79 (277)
T 3tsc_A 8 KLEGRVAFITGAARGQGR------AHAVRMAAEGA-DIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAV- 79 (277)
T ss_dssp TTTTCEEEEESTTSHHHH------HHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEE-
T ss_pred ccCCCEEEEECCccHHHH------HHHHHHHHcCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEE-
Confidence 355667999999999944 34443433332 23333211 0123345566667777665554332
Q ss_pred CCCcceeecCCCCccCcccCCHHHHHHHHHH-HHhcCCCCeEEEEeC-C---CccCCCChHHHHHHHH
Q 023717 153 NEFPAFFTETSGSKVPCRVDSPEDCARLIDV-NMKLKLGSGLVIGVP-I---PREHAASGRVIESAIQ 215 (278)
Q Consensus 153 ~~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~-~~~l~l~~g~lvanP-i---P~e~~~~~~~i~~~i~ 215 (278)
..+.+++++.+++.. ...+|- --+||.|. + ..-..++.+.+++.++
T Consensus 80 ----------------~D~~~~~~v~~~~~~~~~~~g~-id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 130 (277)
T 3tsc_A 80 ----------------VDTRDFDRLRKVVDDGVAALGR-LDIIVANAGVAAPQAWDDITPEDFRDVMD 130 (277)
T ss_dssp ----------------CCTTCHHHHHHHHHHHHHHHSC-CCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred ----------------CCCCCHHHHHHHHHHHHHHcCC-CCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 235567777777664 333442 22455553 1 1112456777666544
No 125
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=30.98 E-value=1.6e+02 Score=24.75 Aligned_cols=106 Identities=20% Similarity=0.202 Sum_probs=55.3
Q ss_pred HHCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecCCCCcceeecC
Q 023717 83 SMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTET 162 (278)
Q Consensus 83 ~~aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy~~~ 162 (278)
.+.|=.|++|||-||+-+ .+..-|.+.+ .-|+.....+--....+++.|+..|..+..
T Consensus 23 ~l~~k~vlVTGas~gIG~------~la~~l~~~G---~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~------------- 80 (267)
T 4iiu_A 23 NAMSRSVLVTGASKGIGR------AIARQLAADG---FNIGVHYHRDAAGAQETLNAIVANGGNGRL------------- 80 (267)
T ss_dssp --CCCEEEETTTTSHHHH------HHHHHHHHTT---CEEEEEESSCHHHHHHHHHHHHHTTCCEEE-------------
T ss_pred ccCCCEEEEECCCChHHH------HHHHHHHHCC---CEEEEEeCCchHHHHHHHHHHHhcCCceEE-------------
Confidence 445667999999999944 4444444433 223222222223445667777776644321
Q ss_pred CCCccCcccCCHHHHHHHHHH-HHhcCCCCeEEEEeC-CCc---cCCCChHHHHHHHH
Q 023717 163 SGSKVPCRVDSPEDCARLIDV-NMKLKLGSGLVIGVP-IPR---EHAASGRVIESAIQ 215 (278)
Q Consensus 163 Sg~~~~~r~d~~~e~A~~~~~-~~~l~l~~g~lvanP-iP~---e~~~~~~~i~~~i~ 215 (278)
++..+.+++++.+++.. ...++-.. +||.|. +.. -..++.+.+++.++
T Consensus 81 ----~~~Dl~~~~~~~~~~~~~~~~~g~id-~li~nAg~~~~~~~~~~~~~~~~~~~~ 133 (267)
T 4iiu_A 81 ----LSFDVANREQCREVLEHEIAQHGAWY-GVVSNAGIARDAAFPALSNDDWDAVIH 133 (267)
T ss_dssp ----EECCTTCHHHHHHHHHHHHHHHCCCS-EEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred ----EEecCCCHHHHHHHHHHHHHHhCCcc-EEEECCCCCCCCccccCCHHHHHHHHH
Confidence 12355677787777763 33344333 455553 211 12456666666554
No 126
>2zkq_b 40S ribosomal protein SA; protein-RNA complex, 40S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=30.96 E-value=21 Score=33.21 Aligned_cols=75 Identities=23% Similarity=0.201 Sum_probs=46.4
Q ss_pred cccchhhhHhHhhh-----------CCeeEEeecCC----------CCcceeecCCCCccCcccCCHHHHHHHHHHHHhc
Q 023717 129 SILDIPRTLEYLET-----------HGVCVAAYKTN----------EFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKL 187 (278)
Q Consensus 129 sILDi~~TLE~LET-----------~GV~V~gy~t~----------~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~~~l 187 (278)
.|+||.+|+++|.. ..|.+||-+.. .+-+||.. +.-+|+.+.+... ..+
T Consensus 47 hIIdL~kT~~~L~~A~~~i~~i~~~~~ILfVgTk~~aq~~V~k~A~~~g~~yv~--~RWlgG~LTN~~t--------~~f 116 (295)
T 2zkq_b 47 YIINLKRTWEKLLLAARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIA--GRFTPGTFTNQIQ--------AAF 116 (295)
T ss_dssp EEECHHHHHHHHHHHHHHHHHSSCGGGEEEEECSHHHHHHHHHHHHHHCCEEEE--SSCCCC-CCCTTC--------SSC
T ss_pred EEEeHHHHHHHHHHHHHHHHHHhCCCeEEEEeCcHHHHHHHHHHHHHhCCceec--ceEecccccCccc--------ccc
Confidence 69999999999853 34777775421 12234432 2334444444322 135
Q ss_pred CCCCeEEEEeCCCccCCCChHHHHHHHHHHHHHHHHcCC
Q 023717 188 KLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNI 226 (278)
Q Consensus 188 ~l~~g~lvanPiP~e~~~~~~~i~~~i~~Al~ea~~~gi 226 (278)
..|.-++|.+|.-+ .+|++||...||
T Consensus 117 ~~PdlliV~Dp~~e-------------~~AI~EA~~lgI 142 (295)
T 2zkq_b 117 REPRLLVVTDPRAD-------------HQPLTEASYVNL 142 (295)
T ss_dssp CCCSEEEESCTTTT-------------HHHHHHHHHHTC
T ss_pred cCCCeEEEeCCCcc-------------hhHHHHHHHhCC
Confidence 67888888888433 278899999988
No 127
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=30.94 E-value=48 Score=29.70 Aligned_cols=69 Identities=16% Similarity=0.130 Sum_probs=43.1
Q ss_pred HHHHHHHHHCCCcEEEeccccccc-----CCCccccc-----cccchhhhc---CCCeEEEecccccccchhhhHhHhhh
Q 023717 76 SATMFFASMVGIPVFVTGGIGGVH-----RHGEHTMD-----ISSDLTELG---RTPVAVVSAGIKSILDIPRTLEYLET 142 (278)
Q Consensus 76 aaTm~lA~~aGI~VFaTGGIGGVH-----rg~~~t~D-----iSaDL~eL~---rtpV~VVcaG~KsILDi~~TLE~LET 142 (278)
..++.+|+..|.+|++|..----+ .|+...+| +...+.++. .-.+++-|+|... +...++.|..
T Consensus 203 ~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~~~g~g~D~vid~~g~~~---~~~~~~~l~~ 279 (363)
T 3uog_A 203 LFGLQIAKATGAEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTGDRGADHILEIAGGAG---LGQSLKAVAP 279 (363)
T ss_dssp HHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEEETTSSC---HHHHHHHEEE
T ss_pred HHHHHHHHHcCCEEEEEecCchhHHHHHHcCCCEEEcCCcccHHHHHHHHhCCCCceEEEECCChHH---HHHHHHHhhc
Confidence 345678889999999997431000 14444455 222344443 3568888999543 5678889988
Q ss_pred CCeeE
Q 023717 143 HGVCV 147 (278)
Q Consensus 143 ~GV~V 147 (278)
.|.-|
T Consensus 280 ~G~iv 284 (363)
T 3uog_A 280 DGRIS 284 (363)
T ss_dssp EEEEE
T ss_pred CCEEE
Confidence 88654
No 128
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=30.83 E-value=1.6e+02 Score=25.21 Aligned_cols=102 Identities=15% Similarity=0.141 Sum_probs=55.5
Q ss_pred CCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecCCCCcceeecCCCC
Q 023717 86 GIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGS 165 (278)
Q Consensus 86 GI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy~~~Sg~ 165 (278)
|=.+++|||-||+-+ -+..-|.+-+- .|++++-- -=.+..+.+.|+..|..+..+
T Consensus 4 ~k~~lVTGas~GIG~------aia~~la~~G~-~V~~~~r~---~~~~~~~~~~l~~~~~~~~~~--------------- 58 (264)
T 3tfo_A 4 DKVILITGASGGIGE------GIARELGVAGA-KILLGARR---QARIEAIATEIRDAGGTALAQ--------------- 58 (264)
T ss_dssp TCEEEESSTTSHHHH------HHHHHHHHTTC-EEEEEESS---HHHHHHHHHHHHHTTCEEEEE---------------
T ss_pred CCEEEEeCCccHHHH------HHHHHHHHCCC-EEEEEECC---HHHHHHHHHHHHhcCCcEEEE---------------
Confidence 446899999999944 34444444332 24333322 223456667777776555433
Q ss_pred ccCcccCCHHHHHHHHHHH-HhcCCCCeEEEEeC-C---CccCCCChHHHHHHHH
Q 023717 166 KVPCRVDSPEDCARLIDVN-MKLKLGSGLVIGVP-I---PREHAASGRVIESAIQ 215 (278)
Q Consensus 166 ~~~~r~d~~~e~A~~~~~~-~~l~l~~g~lvanP-i---P~e~~~~~~~i~~~i~ 215 (278)
..-+.+++++.+++..- ..+|- --+||.|. + ..-..++.+.+++.++
T Consensus 59 --~~Dv~d~~~v~~~~~~~~~~~g~-iD~lVnnAG~~~~~~~~~~~~~~~~~~~~ 110 (264)
T 3tfo_A 59 --VLDVTDRHSVAAFAQAAVDTWGR-IDVLVNNAGVMPLSPLAAVKVDEWERMID 110 (264)
T ss_dssp --ECCTTCHHHHHHHHHHHHHHHSC-CCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred --EcCCCCHHHHHHHHHHHHHHcCC-CCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 23456777777777643 33442 23455553 1 1223457777776554
No 129
>3v46_A Cell division control protein 73; RAS-like fold, non-GTP binding, protein interaction surface, transcription elongation factor; 1.55A {Saccharomyces cerevisiae} PDB: 4dm4_A
Probab=30.65 E-value=24 Score=30.26 Aligned_cols=28 Identities=18% Similarity=0.413 Sum_probs=24.8
Q ss_pred hcCCCeEEEecccccccchhhhHhHhhh
Q 023717 115 LGRTPVAVVSAGIKSILDIPRTLEYLET 142 (278)
Q Consensus 115 L~rtpV~VVcaG~KsILDi~~TLE~LET 142 (278)
-.++|+++|++++.|+|-+---=|+||.
T Consensus 11 ~~~~PIIiVp~s~sSlitm~NiK~FLed 38 (170)
T 3v46_A 11 PRKDPIILIPSAASSILTVANIKQFLLE 38 (170)
T ss_dssp CCSCCEEECCCCTTCSSCTTTHHHHHHH
T ss_pred CCCCCEEEECCCccchhhHHHHHHHHhc
Confidence 4589999999999999999888888875
No 130
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=30.42 E-value=97 Score=27.81 Aligned_cols=72 Identities=14% Similarity=0.171 Sum_probs=42.9
Q ss_pred HHHHHHHH-CCCcEEEecccccc-----cCCCccccccccch----hhhc--CCCeEEEecccccccchhhhHhHhhhCC
Q 023717 77 ATMFFASM-VGIPVFVTGGIGGV-----HRHGEHTMDISSDL----TELG--RTPVAVVSAGIKSILDIPRTLEYLETHG 144 (278)
Q Consensus 77 aTm~lA~~-aGI~VFaTGGIGGV-----Hrg~~~t~DiSaDL----~eL~--rtpV~VVcaG~KsILDi~~TLE~LET~G 144 (278)
.++.+|+. .|.+|++|..---= --|+...+|-+.|+ .++. .-.+++-|+|..+.+ ...++.|...|
T Consensus 187 ~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGad~vi~~~~~~~~~v~~~~~~g~Dvvid~~g~~~~~--~~~~~~l~~~G 264 (363)
T 4dvj_A 187 IAVQIARQRTDLTVIATASRPETQEWVKSLGAHHVIDHSKPLAAEVAALGLGAPAFVFSTTHTDKHA--AEIADLIAPQG 264 (363)
T ss_dssp HHHHHHHHHCCSEEEEECSSHHHHHHHHHTTCSEEECTTSCHHHHHHTTCSCCEEEEEECSCHHHHH--HHHHHHSCTTC
T ss_pred HHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCCHHHHHHHhcCCCceEEEECCCchhhH--HHHHHHhcCCC
Confidence 34556665 68999998863210 01444455554443 3342 345777788876543 56778888888
Q ss_pred eeEEeec
Q 023717 145 VCVAAYK 151 (278)
Q Consensus 145 V~V~gy~ 151 (278)
.-|. ++
T Consensus 265 ~iv~-~g 270 (363)
T 4dvj_A 265 RFCL-ID 270 (363)
T ss_dssp EEEE-CS
T ss_pred EEEE-EC
Confidence 7664 44
No 131
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=30.30 E-value=2e+02 Score=25.06 Aligned_cols=106 Identities=12% Similarity=0.076 Sum_probs=64.7
Q ss_pred HHCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecCCCCcceeecC
Q 023717 83 SMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTET 162 (278)
Q Consensus 83 ~~aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy~~~ 162 (278)
.+.|=.+++|||-+|+-+ -+..-|.+- -.-||..+-. -=.+..+.+.|+..|..+..+.
T Consensus 6 ~L~gKvalVTGas~GIG~------aia~~la~~---Ga~Vvi~~~~-~~~~~~~~~~l~~~g~~~~~~~----------- 64 (255)
T 4g81_D 6 DLTGKTALVTGSARGLGF------AYAEGLAAA---GARVILNDIR-ATLLAESVDTLTRKGYDAHGVA----------- 64 (255)
T ss_dssp CCTTCEEEETTCSSHHHH------HHHHHHHHT---TCEEEECCSC-HHHHHHHHHHHHHTTCCEEECC-----------
T ss_pred CCCCCEEEEeCCCcHHHH------HHHHHHHHC---CCEEEEEECC-HHHHHHHHHHHHhcCCcEEEEE-----------
Confidence 456777999999999955 344444443 3445544432 2345678888888887665433
Q ss_pred CCCccCcccCCHHHHHHHHHHHHh-cCCCCeEEEEeC----CCccCCCChHHHHHHHHH
Q 023717 163 SGSKVPCRVDSPEDCARLIDVNMK-LKLGSGLVIGVP----IPREHAASGRVIESAIQS 216 (278)
Q Consensus 163 Sg~~~~~r~d~~~e~A~~~~~~~~-l~l~~g~lvanP----iP~e~~~~~~~i~~~i~~ 216 (278)
.-+.+++++.+++..-.+ +| +==+||.|- .-.=..++.++.++.++-
T Consensus 65 ------~Dv~~~~~v~~~~~~~~~~~G-~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~v 116 (255)
T 4g81_D 65 ------FDVTDELAIEAAFSKLDAEGI-HVDILINNAGIQYRKPMVELELENWQKVIDT 116 (255)
T ss_dssp ------CCTTCHHHHHHHHHHHHHTTC-CCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred ------eeCCCHHHHHHHHHHHHHHCC-CCcEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 345678888888775544 43 333566552 111235788888887653
No 132
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=30.22 E-value=1.9e+02 Score=22.33 Aligned_cols=85 Identities=16% Similarity=0.196 Sum_probs=52.9
Q ss_pred hhcCCCeEEEecccccccchhh-hHhHhhhCCeeEEeecCCCCcceeecCCCCccCcccCCHHHHHHHHHHHHhcCCCCe
Q 023717 114 ELGRTPVAVVSAGIKSILDIPR-TLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSG 192 (278)
Q Consensus 114 eL~rtpV~VVcaG~KsILDi~~-TLE~LET~GV~V~gy~t~~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~~~l~l~~g 192 (278)
-++++.+.|..+-... .+. .+|++ ..|+||+.+....++-+.....|+-+ ..++++++++.+..-..+
T Consensus 112 ~~~~ad~~l~ps~~e~---~~~~~~Ea~-a~G~PvI~~~~~~~~e~~~~~~g~~~--~~~~~~~l~~~i~~l~~~----- 180 (200)
T 2bfw_A 112 LYGSVDFVIIPSYFEP---FGLVALEAM-CLGAIPIASAVGGLRDIITNETGILV--KAGDPGELANAILKALEL----- 180 (200)
T ss_dssp HHTTCSEEEECCSCCS---SCHHHHHHH-HTTCEEEEESCHHHHHHCCTTTCEEE--CTTCHHHHHHHHHHHHHC-----
T ss_pred HHHHCCEEEECCCCCC---ccHHHHHHH-HCCCCEEEeCCCChHHHcCCCceEEe--cCCCHHHHHHHHHHHHhc-----
Confidence 3677888888763321 132 46666 46999999987666766633345444 345888888877664332
Q ss_pred EEEEeCCCccCCCChHHHHHHHHHHHHHHH
Q 023717 193 LVIGVPIPREHAASGRVIESAIQSALREAR 222 (278)
Q Consensus 193 ~lvanPiP~e~~~~~~~i~~~i~~Al~ea~ 222 (278)
+++..+++-++|.+.++
T Consensus 181 -------------~~~~~~~~~~~a~~~~~ 197 (200)
T 2bfw_A 181 -------------SRSDLSKFRENCKKRAM 197 (200)
T ss_dssp -------------CHHHHHHHHHHHHHHHH
T ss_pred -------------CHHHHHHHHHHHHHHHH
Confidence 44555666666655544
No 133
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=30.21 E-value=2.4e+02 Score=27.09 Aligned_cols=33 Identities=24% Similarity=0.326 Sum_probs=17.8
Q ss_pred ecccccccchhhhHhHhhhCCeeEEeec-----CCCCcceee
Q 023717 124 SAGIKSILDIPRTLEYLETHGVCVAAYK-----TNEFPAFFT 160 (278)
Q Consensus 124 caG~KsILDi~~TLE~LET~GV~V~gy~-----t~~fPaFy~ 160 (278)
+-|+++--|+-+-|+ .|.-.+..+ |+|.|+-+.
T Consensus 340 ~GGI~~~~di~kala----~GAd~V~iGs~f~~t~Espg~~~ 377 (496)
T 4fxs_A 340 DGGIRFSGDISKAIA----AGASCVMVGSMFAGTEEAPGEVI 377 (496)
T ss_dssp ESCCCSHHHHHHHHH----TTCSEEEESTTTTTBTTSSSCCE
T ss_pred eCCCCCHHHHHHHHH----cCCCeEEecHHHhcCCCCCccee
Confidence 345666666666554 244444443 567776543
No 134
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=30.14 E-value=1.2e+02 Score=26.56 Aligned_cols=150 Identities=15% Similarity=0.125 Sum_probs=71.4
Q ss_pred hhHHHHHHHHHHHHHCCCcccEEEEEcCceeecCCHHHHHHHHhcCCCcccccccchHHHHhcCCC------ch--hhHH
Q 023717 5 QNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGN------GA--TTVS 76 (278)
Q Consensus 5 ~Nle~A~~~E~~vR~~GavPATIaii~G~i~VGl~~~el~~la~~~~~~~K~srRDl~~~~a~~~~------Ga--TTVa 76 (278)
+-++.|+++-++++++|+- -|||..+.+ -.-.. -+-+-++..|++...+++.- |. .|..
T Consensus 80 ~~~~~a~~l~~l~~~~~~~----liInd~~~l-------A~~~g--AdGVHLg~~dl~~~~~r~~~~~~~~iG~S~ht~~ 146 (243)
T 3o63_A 80 DELAACEILADAAHRYGAL----FAVNDRADI-------ARAAG--ADVLHLGQRDLPVNVARQILAPDTLIGRSTHDPD 146 (243)
T ss_dssp HHHHHHHHHHHHHHHTTCE----EEEESCHHH-------HHHHT--CSEEEECTTSSCHHHHHHHSCTTCEEEEEECSHH
T ss_pred HHHHHHHHHHHHHHhhCCE----EEEeCHHHH-------HHHhC--CCEEEecCCcCCHHHHHHhhCCCCEEEEeCCCHH
Confidence 4467899999999999843 456654422 11111 12245555665554443221 21 3333
Q ss_pred HHHHHHHHCCCcEEEeccccc--ccCCC-ccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecCC
Q 023717 77 ATMFFASMVGIPVFVTGGIGG--VHRHG-EHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTN 153 (278)
Q Consensus 77 aTm~lA~~aGI~VFaTGGIGG--VHrg~-~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~ 153 (278)
- +.-|...|.+....|-+-- -+.+. ..++|.-..+.+....++-||+.|--+ +.++..+-..|+--+..++
T Consensus 147 E-a~~A~~~GaDyI~vgpvf~T~tK~~~~~~gl~~l~~~~~~~~~~iPvvAiGGI~----~~ni~~~~~aGa~gvav~s- 220 (243)
T 3o63_A 147 Q-VAAAAAGDADYFCVGPCWPTPTKPGRAAPGLGLVRVAAELGGDDKPWFAIGGIN----AQRLPAVLDAGARRIVVVR- 220 (243)
T ss_dssp H-HHHHHHSSCSEEEECCSSCCCC-----CCCHHHHHHHHTC---CCCEEEESSCC----TTTHHHHHHTTCCCEEESH-
T ss_pred H-HHHHhhCCCCEEEEcCccCCCCCCCcchhhHHHHHHHHHhccCCCCEEEecCCC----HHHHHHHHHcCCCEEEEeH-
Confidence 2 4456668888777654311 11111 112232333333310133344444322 3444455555555444443
Q ss_pred CCcceeecCCCCccCcccCCHHHHHHHHHHHHh
Q 023717 154 EFPAFFTETSGSKVPCRVDSPEDCARLIDVNMK 186 (278)
Q Consensus 154 ~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~~~ 186 (278)
+|| +-++|+++++-++..++
T Consensus 221 ---ai~----------~a~dp~~a~~~l~~~~~ 240 (243)
T 3o63_A 221 ---AIT----------SADDPRAAAEQLRSALT 240 (243)
T ss_dssp ---HHH----------TCSSHHHHHHHHHHHHH
T ss_pred ---HHh----------CCCCHHHHHHHHHHHHH
Confidence 232 33678888877766543
No 135
>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*
Probab=29.88 E-value=37 Score=32.41 Aligned_cols=60 Identities=27% Similarity=0.247 Sum_probs=31.3
Q ss_pred CCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeec
Q 023717 86 GIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYK 151 (278)
Q Consensus 86 GI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~ 151 (278)
+=.+++|||.||+-+ -+..-|.+-+-..|++++--...--......+.|+..|..|.-+.
T Consensus 226 ~~~vLITGgtGgIG~------~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~ 285 (486)
T 2fr1_A 226 TGTVLVTGGTGGVGG------QIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAA 285 (486)
T ss_dssp CSEEEEETTTSHHHH------HHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCCCHHHH------HHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEE
Confidence 445899999999843 344444444433344443222111122344555666676655444
No 136
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=29.87 E-value=2.1e+02 Score=24.12 Aligned_cols=107 Identities=17% Similarity=0.189 Sum_probs=55.2
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecc-------------cccccchhhhHhHhhhCCeeEEee
Q 023717 84 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAG-------------IKSILDIPRTLEYLETHGVCVAAY 150 (278)
Q Consensus 84 ~aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG-------------~KsILDi~~TLE~LET~GV~V~gy 150 (278)
+.|=.+++|||-||+-+ -+..-|.+-+- .|++++-- ..+-=++..+.+.++..|..+..+
T Consensus 9 l~~k~~lVTGas~gIG~------aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (286)
T 3uve_A 9 VEGKVAFVTGAARGQGR------SHAVRLAQEGA-DIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTA 81 (286)
T ss_dssp TTTCEEEEESTTSHHHH------HHHHHHHHTTC-EEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEE
T ss_pred cCCCEEEEeCCCchHHH------HHHHHHHHCCC-eEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEE
Confidence 45667999999999844 44444444332 23333211 001123445555666655444433
Q ss_pred cCCCCcceeecCCCCccCcccCCHHHHHHHHHHH-HhcCCCCeEEEEeCC---C--ccCCCChHHHHHHHH
Q 023717 151 KTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVN-MKLKLGSGLVIGVPI---P--REHAASGRVIESAIQ 215 (278)
Q Consensus 151 ~t~~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~-~~l~l~~g~lvanPi---P--~e~~~~~~~i~~~i~ 215 (278)
. ..+.+++++.+++..- ..+| +--+||.|.= + .-..++.+.+++.++
T Consensus 82 ~-----------------~Dv~~~~~v~~~~~~~~~~~g-~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 134 (286)
T 3uve_A 82 E-----------------VDVRDYDALKAAVDSGVEQLG-RLDIIVANAGIGNGGDTLDKTSEEDWTEMID 134 (286)
T ss_dssp E-----------------CCTTCHHHHHHHHHHHHHHHS-CCCEEEECCCCCCCCSCGGGCCHHHHHHHHH
T ss_pred E-----------------cCCCCHHHHHHHHHHHHHHhC-CCCEEEECCcccCCCCccccCCHHHHHHHHH
Confidence 2 3456777777777643 3344 2235665531 1 123457777766554
No 137
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=29.83 E-value=73 Score=22.21 Aligned_cols=26 Identities=23% Similarity=0.373 Sum_probs=21.7
Q ss_pred CCCcccEEEEEcCceeecCCHHHHHHHH
Q 023717 20 NGAVPATIAILEGLPCVGLSTEELERLA 47 (278)
Q Consensus 20 ~GavPATIaii~G~i~VGl~~~el~~la 47 (278)
.+.+|..+ +||+...|.++++|+.+-
T Consensus 65 ~~~vP~l~--~~g~~i~G~~~~~l~~~l 90 (92)
T 3ic4_A 65 SYSVPVVV--KGDKHVLGYNEEKLKELI 90 (92)
T ss_dssp SSCSCEEE--ETTEEEESCCHHHHHHHH
T ss_pred CCCcCEEE--ECCEEEeCCCHHHHHHHh
Confidence 35899765 499999999999998764
No 138
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=29.55 E-value=1.7e+02 Score=25.26 Aligned_cols=104 Identities=17% Similarity=0.215 Sum_probs=55.5
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecCCCCcceeecCC
Q 023717 84 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETS 163 (278)
Q Consensus 84 ~aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy~~~S 163 (278)
+.|=.|++|||-||+-+ -+..-|.+-+- .|++++--. =++..+.+.|+..|..+..+
T Consensus 29 l~gk~vlVTGas~gIG~------~la~~l~~~G~-~V~~~~r~~---~~~~~~~~~l~~~~~~~~~~------------- 85 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGL------ATATEFARRGA-RLVLSDVDQ---PALEQAVNGLRGQGFDAHGV------------- 85 (301)
T ss_dssp STTCEEEEETTTSHHHH------HHHHHHHHTTC-EEEEEESCH---HHHHHHHHHHHHTTCCEEEE-------------
T ss_pred cCCCEEEEeCCCCHHHH------HHHHHHHHCCC-EEEEEECCH---HHHHHHHHHHHhcCCceEEE-------------
Confidence 44567999999999954 34444444432 243333222 23455666777666544332
Q ss_pred CCccCcccCCHHHHHHHHHHH-HhcCCCCeEEEEeCC-C---ccCCCChHHHHHHHH
Q 023717 164 GSKVPCRVDSPEDCARLIDVN-MKLKLGSGLVIGVPI-P---REHAASGRVIESAIQ 215 (278)
Q Consensus 164 g~~~~~r~d~~~e~A~~~~~~-~~l~l~~g~lvanPi-P---~e~~~~~~~i~~~i~ 215 (278)
+.-+.+++++.+++..- ..+| +--+||.|.= . .-...+.+.+++.++
T Consensus 86 ----~~Dv~d~~~v~~~~~~~~~~~g-~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 137 (301)
T 3tjr_A 86 ----VCDVRHLDEMVRLADEAFRLLG-GVDVVFSNAGIVVAGPLAQMNHDDWRWVID 137 (301)
T ss_dssp ----ECCTTCHHHHHHHHHHHHHHHS-SCSEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred ----EccCCCHHHHHHHHHHHHHhCC-CCCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 23455677777776643 2333 2235666532 1 112456676666544
No 139
>3lop_A Substrate binding periplasmic protein; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.55A {Ralstonia solanacearum}
Probab=29.52 E-value=1.3e+02 Score=25.79 Aligned_cols=127 Identities=14% Similarity=0.119 Sum_probs=0.0
Q ss_pred CCCchhhHHHHHH--HHHHCCCcEEEecccccccCCCccccccccc-----------hhhhcCCCeEEEec-ccccccch
Q 023717 68 RGNGATTVSATMF--FASMVGIPVFVTGGIGGVHRHGEHTMDISSD-----------LTELGRTPVAVVSA-GIKSILDI 133 (278)
Q Consensus 68 ~~~GaTTVaaTm~--lA~~aGI~VFaTGGIGGVHrg~~~t~DiSaD-----------L~eL~rtpV~VVca-G~KsILDi 133 (278)
+-.+..+..+.+- ++...+|+++..+.-.-.-.+....|-+..| |.+++-..|++|.. ..-+---.
T Consensus 79 g~~~s~~~~~~~~~~~~~~~~iP~v~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~~~g~~~iaii~~~~~~g~~~~ 158 (364)
T 3lop_A 79 TVVGTANVEALMREGVLAEARLPLVGPATGASSMTTDPLVFPIKASYQQEIDKMITALVTIGVTRIGVLYQEDALGKEAI 158 (364)
T ss_dssp CCCCHHHHHHHHHTTHHHHHTCCEESCSCCCGGGGSCTTEECCSCCHHHHHHHHHHHHHHTTCCCEEEEEETTHHHHHHH
T ss_pred ecCCCHHHHhhCchhhHHhcCCcEEEcccCcHhhccCCcEEEeCCChHHHHHHHHHHHHHcCCceEEEEEeCchhhHHHH
Q ss_pred hhhHhHhhhCCeeEEee-----cCCCCcceeec--CCCCccCcccCCHHHHHHHHHHHHhcCCCCeEE
Q 023717 134 PRTLEYLETHGVCVAAY-----KTNEFPAFFTE--TSGSKVPCRVDSPEDCARLIDVNMKLKLGSGLV 194 (278)
Q Consensus 134 ~~TLE~LET~GV~V~gy-----~t~~fPaFy~~--~Sg~~~~~r~d~~~e~A~~~~~~~~l~l~~g~l 194 (278)
..-.+.|+.+|++|+.. ++.+|-....+ .++..+=+-..+..+++.++++-+++|+...++
T Consensus 159 ~~~~~~~~~~G~~v~~~~~~~~~~~d~~~~~~~l~~~~~d~v~~~~~~~~a~~~~~~~~~~g~~~~~i 226 (364)
T 3lop_A 159 TGVERTLKAHALAITAMASYPRNTANVGPAVDKLLAADVQAIFLGATAEPAAQFVRQYRARGGEAQLL 226 (364)
T ss_dssp HHHHHHHHTTTCCCSEEEEECTTSCCCHHHHHHHHHSCCSEEEEESCHHHHHHHHHHHHHTTCCCEEE
T ss_pred HHHHHHHHHcCCcEEEEEEecCCCccHHHHHHHHHhCCCCEEEEecCcHHHHHHHHHHHHcCCCCeEE
No 140
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=29.41 E-value=3e+02 Score=25.43 Aligned_cols=6 Identities=50% Similarity=0.684 Sum_probs=3.9
Q ss_pred CCCCcc
Q 023717 152 TNEFPA 157 (278)
Q Consensus 152 t~~fPa 157 (278)
++|.|+
T Consensus 242 t~Esp~ 247 (361)
T 3khj_A 242 TEESPG 247 (361)
T ss_dssp BTTSSC
T ss_pred CCcCCc
Confidence 567766
No 141
>3ipc_A ABC transporter, substrate binding protein (amino; venus flytrap domain, transport protein; 1.30A {Agrobacterium tumefaciens} PDB: 3ip5_A 3ip6_A 3ip7_A 3ip9_A 3ipa_A
Probab=29.27 E-value=1.2e+02 Score=25.79 Aligned_cols=125 Identities=14% Similarity=0.095 Sum_probs=0.0
Q ss_pred CCCchhhHHHHHHHHHHCCCcEEEecc----cccccCCCccccccccc-----------hhhh-cCCCeEEEec-ccccc
Q 023717 68 RGNGATTVSATMFFASMVGIPVFVTGG----IGGVHRHGEHTMDISSD-----------LTEL-GRTPVAVVSA-GIKSI 130 (278)
Q Consensus 68 ~~~GaTTVaaTm~lA~~aGI~VFaTGG----IGGVHrg~~~t~DiSaD-----------L~eL-~rtpV~VVca-G~KsI 130 (278)
+........+.+-++...+|+++..+. +-+ ++....|-++.| |.+. +...|++|.. ..-+.
T Consensus 75 g~~~s~~~~~~~~~~~~~~ip~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~iaii~~~~~~~~ 152 (356)
T 3ipc_A 75 GHANSGVSIPASEVYAENGILEITPAATNPVFTE--RGLWNTFRTCGRDDQQGGIAGKYLADHFKDAKVAIIHDKTPYGQ 152 (356)
T ss_dssp ECSSHHHHHHHHHHHHTTTCEEEESSCCCGGGGS--SCCTTEEESSCCHHHHHHHHHHHHHHHCTTCCEEEEECSSHHHH
T ss_pred cCCCcHHHHHHHHHHHhCCCeEEecCCCCcHhhc--CCCCcEEEecCChHHHHHHHHHHHHHhcCCCEEEEEeCCChHHH
Q ss_pred cchhhhHhHhhhCCeeEEee-----cCCCCcceeec--CCCCccCcccCCHHHHHHHHHHHHhcCCCCeEE
Q 023717 131 LDIPRTLEYLETHGVCVAAY-----KTNEFPAFFTE--TSGSKVPCRVDSPEDCARLIDVNMKLKLGSGLV 194 (278)
Q Consensus 131 LDi~~TLE~LET~GV~V~gy-----~t~~fPaFy~~--~Sg~~~~~r~d~~~e~A~~~~~~~~l~l~~g~l 194 (278)
--...-.+.|+.+|++|+.. ++.+|.....+ .++..+=+-..+..+++.++++-+++|+...++
T Consensus 153 ~~~~~~~~~l~~~g~~v~~~~~~~~~~~d~~~~~~~l~~~~~d~v~~~~~~~~a~~~~~~~~~~g~~~~~~ 223 (356)
T 3ipc_A 153 GLADETKKAANAAGVTEVMYEGVNVGDKDFSALISKMKEAGVSIIYWGGLHTEAGLIIRQAADQGLKAKLV 223 (356)
T ss_dssp HHHHHHHHHHHHTTCCCSEEEECCTTCCCCHHHHHHHHHTTCCEEEEESCHHHHHHHHHHHHHHTCCCEEE
T ss_pred HHHHHHHHHHHHcCCEEEEEEeeCCCCCCHHHHHHHHHhcCCCEEEEccCchHHHHHHHHHHHCCCCCcEE
No 142
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=29.25 E-value=1.1e+02 Score=26.98 Aligned_cols=68 Identities=15% Similarity=0.064 Sum_probs=39.0
Q ss_pred HHHHHHHHHCCCcEEEeccccccc-----CCCccccccccchhhhc-CCCeEEEecccccccchhhhHhHhhhCCeeEE
Q 023717 76 SATMFFASMVGIPVFVTGGIGGVH-----RHGEHTMDISSDLTELG-RTPVAVVSAGIKSILDIPRTLEYLETHGVCVA 148 (278)
Q Consensus 76 aaTm~lA~~aGI~VFaTGGIGGVH-----rg~~~t~DiSaDL~eL~-rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~ 148 (278)
..++.+|+..|.+|++|..---=+ .|+...+ .|..++. .-.+++-|+|..+. +...++.|...|.-|.
T Consensus 190 ~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~---~~~~~~~~~~D~vid~~g~~~~--~~~~~~~l~~~G~iv~ 263 (348)
T 3two_A 190 SMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFY---TDPKQCKEELDFIISTIPTHYD--LKDYLKLLTYNGDLAL 263 (348)
T ss_dssp HHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEE---SSGGGCCSCEEEEEECCCSCCC--HHHHHTTEEEEEEEEE
T ss_pred HHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeec---CCHHHHhcCCCEEEECCCcHHH--HHHHHHHHhcCCEEEE
Confidence 345677888888888876321100 0332222 2222332 34477778887643 5677888888886554
No 143
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=29.20 E-value=2.7e+02 Score=23.71 Aligned_cols=103 Identities=15% Similarity=0.147 Sum_probs=56.7
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecCCCCcceeecCC
Q 023717 84 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETS 163 (278)
Q Consensus 84 ~aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy~~~S 163 (278)
+.|=.+++|||-||+-+ -+..-|.+-+- .|++++ -. -....+.+.++..|..+..+
T Consensus 29 l~gk~~lVTGas~GIG~------aia~~la~~G~-~V~~~~--r~--~~~~~~~~~~~~~~~~~~~~------------- 84 (273)
T 3uf0_A 29 LAGRTAVVTGAGSGIGR------AIAHGYARAGA-HVLAWG--RT--DGVKEVADEIADGGGSAEAV------------- 84 (273)
T ss_dssp CTTCEEEEETTTSHHHH------HHHHHHHHTTC-EEEEEE--SS--THHHHHHHHHHTTTCEEEEE-------------
T ss_pred CCCCEEEEeCCCcHHHH------HHHHHHHHCCC-EEEEEc--CH--HHHHHHHHHHHhcCCcEEEE-------------
Confidence 34667999999999954 45554544432 243333 21 23455666676666555433
Q ss_pred CCccCcccCCHHHHHHHHHHHHhcCCCCeEEEEeC-C---CccCCCChHHHHHHHH
Q 023717 164 GSKVPCRVDSPEDCARLIDVNMKLKLGSGLVIGVP-I---PREHAASGRVIESAIQ 215 (278)
Q Consensus 164 g~~~~~r~d~~~e~A~~~~~~~~l~l~~g~lvanP-i---P~e~~~~~~~i~~~i~ 215 (278)
+..+.+++++.++.....++|-- -+||.|. + ..-..++.+.+++.++
T Consensus 85 ----~~Dv~d~~~v~~~~~~~~~~g~i-D~lv~nAg~~~~~~~~~~~~~~~~~~~~ 135 (273)
T 3uf0_A 85 ----VADLADLEGAANVAEELAATRRV-DVLVNNAGIIARAPAEEVSLGRWREVLT 135 (273)
T ss_dssp ----ECCTTCHHHHHHHHHHHHHHSCC-CEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred ----EecCCCHHHHHHHHHHHHhcCCC-cEEEECCCCCCCCCchhCCHHHHHHHHH
Confidence 23456777777775555555422 3455552 1 1222457777766554
No 144
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=29.13 E-value=1.4e+02 Score=24.92 Aligned_cols=104 Identities=17% Similarity=0.203 Sum_probs=50.1
Q ss_pred CCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhC-CeeEEeecCCCCcceeecCC
Q 023717 85 VGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETH-GVCVAAYKTNEFPAFFTETS 163 (278)
Q Consensus 85 aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~-GV~V~gy~t~~fPaFy~~~S 163 (278)
.|=.+++|||-||+-+ -+..-|.+-+- .|++++-.... ++..+.+.|+.. |..+..
T Consensus 3 ~~k~vlVTGas~gIG~------~ia~~l~~~G~-~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~-------------- 59 (260)
T 1x1t_A 3 KGKVAVVTGSTSGIGL------GIATALAAQGA-DIVLNGFGDAA--EIEKVRAGLAAQHGVKVLY-------------- 59 (260)
T ss_dssp TTCEEEETTCSSHHHH------HHHHHHHHTTC-EEEEECCSCHH--HHHHHHHHHHHHHTSCEEE--------------
T ss_pred CCCEEEEeCCCcHHHH------HHHHHHHHcCC-EEEEEeCCcch--HHHHHHHHHHhccCCcEEE--------------
Confidence 3556999999999944 34444444332 23333322111 033344444433 322221
Q ss_pred CCccCcccCCHHHHHHHHHH-HHhcCCCCeEEEEeC-CC---ccCCCChHHHHHHHH
Q 023717 164 GSKVPCRVDSPEDCARLIDV-NMKLKLGSGLVIGVP-IP---REHAASGRVIESAIQ 215 (278)
Q Consensus 164 g~~~~~r~d~~~e~A~~~~~-~~~l~l~~g~lvanP-iP---~e~~~~~~~i~~~i~ 215 (278)
++.-+.+++++.+++.. ...+|- --+||.|. +. .-..++.+.+++.++
T Consensus 60 ---~~~D~~~~~~v~~~~~~~~~~~g~-iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 112 (260)
T 1x1t_A 60 ---DGADLSKGEAVRGLVDNAVRQMGR-IDILVNNAGIQHTALIEDFPTEKWDAILA 112 (260)
T ss_dssp ---ECCCTTSHHHHHHHHHHHHHHHSC-CSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred ---EECCCCCHHHHHHHHHHHHHhcCC-CCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 12345677777777763 333442 23455553 11 112456666665443
No 145
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=28.88 E-value=24 Score=31.36 Aligned_cols=37 Identities=19% Similarity=0.285 Sum_probs=32.1
Q ss_pred hhcCCCeEEEecccccccchhhhHhHhhhCCeeEEee
Q 023717 114 ELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAY 150 (278)
Q Consensus 114 eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy 150 (278)
.++..-+.|+..|.-++-++.++++.|+..|++++|+
T Consensus 235 ~~ad~vilV~~~~~~~~~~~~~~~~~l~~~~~~~~Gv 271 (299)
T 3cio_A 235 RSVGTSLLVARFGLNTAKEVSLSMQRLEQAGVNIKGA 271 (299)
T ss_dssp GGCSEEEEEEETTTSCTTHHHHHHHHHHHTTCCCCCE
T ss_pred HHCCEEEEEEcCCCChHHHHHHHHHHHHhCCCCeEEE
Confidence 3456668888999999999999999999999998876
No 146
>1o17_A Anthranilate PRT, anthranilate phosphoribosyltransferase, TRPD; nucleoside-phosphorylases; 2.05A {Sulfolobus solfataricus} SCOP: a.46.2.1 c.27.1.1 PDB: 1gxb_A 1zxy_A* 1zyk_A* 2gvq_A* 3gbr_A*
Probab=28.86 E-value=21 Score=33.23 Aligned_cols=167 Identities=15% Similarity=0.131 Sum_probs=91.5
Q ss_pred cCCHHHHHHHHhcCCCcc--cccccchHHHH----hcCCCchhhHHHHHHHHHHC-CC---cEEEecccccccCCCcccc
Q 023717 37 GLSTEELERLAKLGSKAQ--KTARRDIAHVV----ATRGNGATTVSATMFFASMV-GI---PVFVTGGIGGVHRHGEHTM 106 (278)
Q Consensus 37 Gl~~~el~~la~~~~~~~--K~srRDl~~~~----a~~~~GaTTVaaTm~lA~~a-GI---~VFaTGGIGGVHrg~~~t~ 106 (278)
-||.+|.+.+-+. .. +++--.++..+ .+|.+---+...+..+-+.+ -+ ++.=++|.||+.+ .||
T Consensus 15 ~Lt~eEa~~~~~~---i~~g~~~~~QiaAfL~alr~kget~eEiag~~~am~~~~~~~~~~~~vD~~gTGGdg~---~tf 88 (345)
T 1o17_A 15 DLEINEAEELAKA---IIRGEVPEILVSAILVALRMKGESKNEIVGFARAMRELAIKIDVPNAIDTAGTGGDGL---GTV 88 (345)
T ss_dssp CCCHHHHHHHHHH---HHTTCSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHSCCCCCTTCEECCC----CC---CBC
T ss_pred CCCHHHHHHHHHH---HHcCCCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhCCCCCCCCceeeCCCCCCCC---Ccc
Confidence 3788888776542 11 22222232222 24555444444443333322 23 3466999999844 599
Q ss_pred ccccchh-hhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecCCCC--------cceeecCCCCccCcccCCHHHH
Q 023717 107 DISSDLT-ELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEF--------PAFFTETSGSKVPCRVDSPEDC 177 (278)
Q Consensus 107 DiSaDL~-eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~f--------PaFy~~~Sg~~~~~r~d~~~e~ 177 (278)
.||.=+. =++.. +-|+=-|-.++=--.-|.+.||..||++- -..+++ -+|.+...=++..
T Consensus 89 NiSt~~A~v~Aa~-v~VaKHGnR~~ss~~GsaDvLEaLGv~~~-~~~e~~~~~l~~~gi~fl~a~~~hPa~--------- 157 (345)
T 1o17_A 89 NVSTASAILLSLV-NPVAKHGNRAVSGKSGSADVLEALGYNII-VPPERAKELVNKTNFVFLFAQYYHPAM--------- 157 (345)
T ss_dssp CHHHHHHHHHTTT-SCEEEEECCCSSSSCSHHHHHHHHTBCCC-CCHHHHHHHHHHHSEEEEEHHHHCGGG---------
T ss_pred chHHHHHHHHHHc-CCEEEECCCCCCCcccHHHHHHhCCCCCC-CCHHHHHHHHHHcCEEEEehHHhChHH---------
Confidence 9986552 35776 77777777777777779999999999873 111111 2455442111111
Q ss_pred HHHHHHHHhcCCCCeE----EEEeCCCccCCCC---hHHHHHHHHHHHHH
Q 023717 178 ARLIDVNMKLKLGSGL----VIGVPIPREHAAS---GRVIESAIQSALRE 220 (278)
Q Consensus 178 A~~~~~~~~l~l~~g~----lvanPiP~e~~~~---~~~i~~~i~~Al~e 220 (278)
-.++..++.||++.-. =+.||...++.+- ...+.+.+.++++.
T Consensus 158 k~l~~~R~~lg~rTvfN~lgpL~nPa~~~~ql~Gv~~~~~~~~~A~~l~~ 207 (345)
T 1o17_A 158 KNVANVRKTLGIRTIFNILGPLTNPANAKYQLMGVFSKDHLDLLSKSAYE 207 (345)
T ss_dssp GGTHHHHHHHCSCCGGGGCGGGCCTTCCSEEEEECSSHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCCCHHHHHHHhcCccCCCeEEEEeeCHHHHHHHHHHHHH
Confidence 2455667888877643 3567876666553 24556666666654
No 147
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=28.61 E-value=1.9e+02 Score=23.05 Aligned_cols=13 Identities=23% Similarity=0.317 Sum_probs=10.7
Q ss_pred cEEEecccccccC
Q 023717 88 PVFVTGGIGGVHR 100 (278)
Q Consensus 88 ~VFaTGGIGGVHr 100 (278)
+|++|||-|++-+
T Consensus 6 ~ilItGatG~iG~ 18 (227)
T 3dhn_A 6 KIVLIGASGFVGS 18 (227)
T ss_dssp EEEEETCCHHHHH
T ss_pred EEEEEcCCchHHH
Confidence 6899999999833
No 148
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=28.53 E-value=1.8e+02 Score=24.53 Aligned_cols=104 Identities=22% Similarity=0.278 Sum_probs=53.9
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCC-eeEEeecCCCCcceeecC
Q 023717 84 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHG-VCVAAYKTNEFPAFFTET 162 (278)
Q Consensus 84 ~aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~G-V~V~gy~t~~fPaFy~~~ 162 (278)
+.|=.+++|||-||+-+ -+..-|.+-+- .|++++-- -=++..+.+.|+..| ..+..+
T Consensus 8 l~~k~vlVTGas~gIG~------aia~~l~~~G~-~V~~~~r~---~~~~~~~~~~l~~~~~~~~~~~------------ 65 (262)
T 3pk0_A 8 LQGRSVVVTGGTKGIGR------GIATVFARAGA-NVAVAGRS---TADIDACVADLDQLGSGKVIGV------------ 65 (262)
T ss_dssp CTTCEEEETTCSSHHHH------HHHHHHHHTTC-EEEEEESC---HHHHHHHHHHHHTTSSSCEEEE------------
T ss_pred CCCCEEEEECCCcHHHH------HHHHHHHHCCC-EEEEEeCC---HHHHHHHHHHHHhhCCCcEEEE------------
Confidence 45667999999999944 34444444332 34443322 223455666666554 222211
Q ss_pred CCCccCcccCCHHHHHHHHHH-HHhcCCCCeEEEEeCC----CccCCCChHHHHHHHH
Q 023717 163 SGSKVPCRVDSPEDCARLIDV-NMKLKLGSGLVIGVPI----PREHAASGRVIESAIQ 215 (278)
Q Consensus 163 Sg~~~~~r~d~~~e~A~~~~~-~~~l~l~~g~lvanPi----P~e~~~~~~~i~~~i~ 215 (278)
+..+.+++++.+++.. ..++| +--+||.|.= ..-..++.+.+++.++
T Consensus 66 -----~~Dv~~~~~v~~~~~~~~~~~g-~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 117 (262)
T 3pk0_A 66 -----QTDVSDRAQCDALAGRAVEEFG-GIDVVCANAGVFPDAPLATMTPEQLNGIFA 117 (262)
T ss_dssp -----ECCTTSHHHHHHHHHHHHHHHS-CCSEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred -----EcCCCCHHHHHHHHHHHHHHhC-CCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 2345577777777653 33344 2234555521 1123457777666544
No 149
>2qip_A Protein of unknown function VPA0982; APC85975, vibrio parahaemolyticus RIMD 2210633, STR genomics, PSI-2, protein structure initiative; 1.48A {Vibrio parahaemolyticus}
Probab=28.50 E-value=42 Score=27.26 Aligned_cols=47 Identities=19% Similarity=0.271 Sum_probs=37.5
Q ss_pred ccccc--cccchhhhcCC-CeEEEecccccccchhhhHhHhhhC-CeeEEeecC
Q 023717 103 EHTMD--ISSDLTELGRT-PVAVVSAGIKSILDIPRTLEYLETH-GVCVAAYKT 152 (278)
Q Consensus 103 ~~t~D--iSaDL~eL~rt-pV~VVcaG~KsILDi~~TLE~LET~-GV~V~gy~t 152 (278)
+..+| +.-|..++++. ..+|++||=. |.-..++.|..+ |+.|++++.
T Consensus 91 k~~~Dv~laiD~~~~a~~~d~~vLvSgD~---DF~plv~~lr~~~G~~V~v~g~ 141 (165)
T 2qip_A 91 KGDWDVGITLDAIEIAPDVDRVILVSGDG---DFSLLVERIQQRYNKKVTVYGV 141 (165)
T ss_dssp SCCCHHHHHHHHHHHGGGCSEEEEECCCG---GGHHHHHHHHHHHCCEEEEEEC
T ss_pred CCCccHHHHHHHHHhhccCCEEEEEECCh---hHHHHHHHHHHHcCcEEEEEeC
Confidence 44555 56788888765 4888999964 888999999995 999999984
No 150
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=28.46 E-value=74 Score=27.63 Aligned_cols=60 Identities=22% Similarity=0.293 Sum_probs=42.4
Q ss_pred cCCCeEEEecccccccchhhhHhH---hhhCCeeEEeecCCCCcceeecCCCCccCcccCCHHHHHHHHHHH--HhcCCC
Q 023717 116 GRTPVAVVSAGIKSILDIPRTLEY---LETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVN--MKLKLG 190 (278)
Q Consensus 116 ~rtpV~VVcaG~KsILDi~~TLE~---LET~GV~V~gy~t~~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~--~~l~l~ 190 (278)
.+.|++++-+ .+-.-|.|+|- |...|+.|+.= .|+||. +..+.+|+...+-.+ +.||++
T Consensus 130 ~~~plvl~Pa---em~~~~~~~~Nm~~L~~~G~~iipp----~~g~ya---------~p~~iediv~~vv~r~ld~lgi~ 193 (209)
T 3zqu_A 130 ERRPLVLVPR---EAPFSSIHLENMLKLSNLGAVILPA----APGFYH---------QPQSVEDLVDFVVARILNTLGIP 193 (209)
T ss_dssp HTCCEEEEEC---CSSCCHHHHHHHHHHHHHTCEECCS----CCCCTT---------CCCSHHHHHHHHHHHHHHHHTCC
T ss_pred cCCcEEEEEc---ccccCHHHHHHHHHHHHCCCEEeCC----Cccccc---------CCCCHHHHHHHHHHHHHHhCCCC
Confidence 3889988877 77777777754 56679988753 589994 566778887766554 356765
Q ss_pred C
Q 023717 191 S 191 (278)
Q Consensus 191 ~ 191 (278)
.
T Consensus 194 ~ 194 (209)
T 3zqu_A 194 Q 194 (209)
T ss_dssp C
T ss_pred C
Confidence 4
No 151
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=28.45 E-value=1.7e+02 Score=26.06 Aligned_cols=72 Identities=13% Similarity=0.118 Sum_probs=41.5
Q ss_pred HHHHHHHHCCCcEEEeccccc-----c-cCCCcccccccc--chhhh-cCCCeEEEecccccccchhhhHhHhhhCCeeE
Q 023717 77 ATMFFASMVGIPVFVTGGIGG-----V-HRHGEHTMDISS--DLTEL-GRTPVAVVSAGIKSILDIPRTLEYLETHGVCV 147 (278)
Q Consensus 77 aTm~lA~~aGI~VFaTGGIGG-----V-Hrg~~~t~DiSa--DL~eL-~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V 147 (278)
.++.+|+..|.+|+++..--- . .-|+...+|.+. ++.++ ....+++-|+|..+. +...++.|...|.-|
T Consensus 202 ~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~D~vid~~g~~~~--~~~~~~~l~~~G~iv 279 (366)
T 1yqd_A 202 VAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQAAAGTLDGIIDTVSAVHP--LLPLFGLLKSHGKLI 279 (366)
T ss_dssp HHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEETTCHHHHHHTTTCEEEEEECCSSCCC--SHHHHHHEEEEEEEE
T ss_pred HHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEeccCHHHHHHhhCCCCEEEECCCcHHH--HHHHHHHHhcCCEEE
Confidence 446677778888888764321 0 124433444332 23333 245688889987543 357788888877543
Q ss_pred Eeec
Q 023717 148 AAYK 151 (278)
Q Consensus 148 ~gy~ 151 (278)
-++
T Consensus 280 -~~g 282 (366)
T 1yqd_A 280 -LVG 282 (366)
T ss_dssp -ECC
T ss_pred -EEc
Confidence 344
No 152
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=28.30 E-value=53 Score=29.57 Aligned_cols=106 Identities=16% Similarity=0.155 Sum_probs=58.3
Q ss_pred cCCCeEEEecccccccchhhhHhHhhhCCeeEEeecCCCCcceeecCCCCccCcccC-CHHH----HHHHHHHHHhcCCC
Q 023717 116 GRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVD-SPED----CARLIDVNMKLKLG 190 (278)
Q Consensus 116 ~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy~~~Sg~~~~~r~d-~~~e----~A~~~~~~~~l~l~ 190 (278)
-.+.+++.+-+.+. |+.+.++.+...|++.+. +|...|.....+++. |.+| +.+++..-++.|+.
T Consensus 67 ~~~~i~~l~~~~~~--di~~a~~~~~~ag~~~v~--------i~~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~ 136 (293)
T 3ewb_X 67 KHCSVTGLARCVEG--DIDRAEEALKDAVSPQIH--------IFLATSDVHMEYKLKMSRAEVLASIKHHISYARQKFDV 136 (293)
T ss_dssp CSSEEEEEEESSHH--HHHHHHHHHTTCSSEEEE--------EEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSC
T ss_pred CCCEEEEEecCCHH--HHHHHHHHHhhcCCCEEE--------EEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCCE
Confidence 34566666655433 789999999989999886 444444443333322 3333 33444444455543
Q ss_pred CeEEEEeCCCccCCCChHHHHHHHHHHHHHHHHcCCC-------CccCChHHHHHH
Q 023717 191 SGLVIGVPIPREHAASGRVIESAIQSALREAREKNIT-------GNAETPFLLARV 239 (278)
Q Consensus 191 ~g~lvanPiP~e~~~~~~~i~~~i~~Al~ea~~~gi~-------Gk~vTPflL~~i 239 (278)
+-+ .| +.....+.+.+.++++++. +.|+. --..||+-..++
T Consensus 137 --v~~-~~-~d~~~~~~~~~~~~~~~~~----~~G~~~i~l~DT~G~~~P~~v~~l 184 (293)
T 3ewb_X 137 --VQF-SP-EDATRSDRAFLIEAVQTAI----DAGATVINIPDTVGYTNPTEFGQL 184 (293)
T ss_dssp --EEE-EE-ETGGGSCHHHHHHHHHHHH----HTTCCEEEEECSSSCCCHHHHHHH
T ss_pred --EEE-Ee-ccCCCCCHHHHHHHHHHHH----HcCCCEEEecCCCCCCCHHHHHHH
Confidence 223 33 3445677766666665543 34542 234688755443
No 153
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=28.20 E-value=54 Score=22.20 Aligned_cols=26 Identities=23% Similarity=0.392 Sum_probs=20.4
Q ss_pred CCCcccEEEEEcCceeecCCHHHHHHHH
Q 023717 20 NGAVPATIAILEGLPCVGLSTEELERLA 47 (278)
Q Consensus 20 ~GavPATIaii~G~i~VGl~~~el~~la 47 (278)
...+|.. ++||+...|.+.++|+.+-
T Consensus 48 ~~~vP~~--~~~g~~~~g~~~~~l~~~l 73 (81)
T 1h75_A 48 FRQLPVV--IAGDLSWSGFRPDMINRLH 73 (81)
T ss_dssp CCSSCEE--EETTEEEESCCHHHHGGGS
T ss_pred CCccCEE--EECCEEEecCCHHHHHHHH
Confidence 3567966 6799999999999987553
No 154
>1w5q_A Delta-aminolevulinic acid dehydratase; synthase, evolution, metalloenzyme, porphobilinogen synthase, protein engineering,; 1.4A {Pseudomonas aeruginosa} PDB: 1w5p_A* 1w5o_A 1w5n_A 1w56_A 1w5m_A 1w54_A 1gzg_A* 1b4k_A 2woq_A* 2c14_A* 2c16_A* 2c19_A* 2c15_A* 2c18_A* 2c13_A*
Probab=28.18 E-value=72 Score=30.23 Aligned_cols=67 Identities=19% Similarity=0.169 Sum_probs=48.0
Q ss_pred CCcceeecCCCCccC-------cccCCHHHHHHHHHHHHhcCCCCeEEEEeCCCc-c-----CCCChHHHHHHHHHHHHH
Q 023717 154 EFPAFFTETSGSKVP-------CRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPR-E-----HAASGRVIESAIQSALRE 220 (278)
Q Consensus 154 ~fPaFy~~~Sg~~~~-------~r~d~~~e~A~~~~~~~~l~l~~g~lvanPiP~-e-----~~~~~~~i~~~i~~Al~e 220 (278)
-+|-|...+.+.+-| ||+ +.+.+.+.+..-+++|+++=+||.+|.++ . .+.++ +.++.+|++.
T Consensus 39 I~PlFV~eg~~~~~~I~SMPGv~r~-sid~l~~~~~~~~~lGi~~v~LFgv~~~~~KD~~gs~A~~~---~g~v~rair~ 114 (337)
T 1w5q_A 39 ILPVFVLDGVNQRESIPSMPGVERL-SIDQLLIEAEEWVALGIPALALFPVTPVEKKSLDAAEAYNP---EGIAQRATRA 114 (337)
T ss_dssp EEEEEEESSSSCEEECTTSTTCEEE-EHHHHHHHHHHHHHTTCCEEEEEECCCGGGCBSSCGGGGCT---TSHHHHHHHH
T ss_pred eeeEEEecCCCCccccCCCCCceee-CHHHHHHHHHHHHHCCCCEEEEecCCCcccCCcccCccCCC---CChHHHHHHH
Confidence 468888887776432 222 56788888899999999999999996433 2 24444 6688888887
Q ss_pred HHHc
Q 023717 221 AREK 224 (278)
Q Consensus 221 a~~~ 224 (278)
.++.
T Consensus 115 iK~~ 118 (337)
T 1w5q_A 115 LRER 118 (337)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7765
No 155
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=28.09 E-value=2e+02 Score=24.60 Aligned_cols=14 Identities=36% Similarity=0.446 Sum_probs=9.3
Q ss_pred CCCcEEEecccccc
Q 023717 85 VGIPVFVTGGIGGV 98 (278)
Q Consensus 85 aGI~VFaTGGIGGV 98 (278)
-+-+|++|||-|++
T Consensus 18 ~~~~vlVtGatG~i 31 (347)
T 4id9_A 18 GSHMILVTGSAGRV 31 (347)
T ss_dssp ---CEEEETTTSHH
T ss_pred CCCEEEEECCCChH
Confidence 34468888888887
No 156
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=27.84 E-value=1.8e+02 Score=24.72 Aligned_cols=105 Identities=15% Similarity=0.127 Sum_probs=55.1
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecCCCCcceeecCC
Q 023717 84 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETS 163 (278)
Q Consensus 84 ~aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy~~~S 163 (278)
+.|=.|++|||-||+-+ -+..-|.+-+ .-|+..+..+-=....+.+.++..|..+..+
T Consensus 26 l~~k~vlVTGas~gIG~------aia~~la~~G---~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 83 (269)
T 4dmm_A 26 LTDRIALVTGASRGIGR------AIALELAAAG---AKVAVNYASSAGAADEVVAAIAAAGGEAFAV------------- 83 (269)
T ss_dssp TTTCEEEETTCSSHHHH------HHHHHHHHTT---CEEEEEESSCHHHHHHHHHHHHHTTCCEEEE-------------
T ss_pred CCCCEEEEECCCCHHHH------HHHHHHHHCC---CEEEEEeCCChHHHHHHHHHHHhcCCcEEEE-------------
Confidence 45667999999999944 3444444433 2233222212122345556666666544322
Q ss_pred CCccCcccCCHHHHHHHHHH-HHhcCCCCeEEEEeC-CC---ccCCCChHHHHHHHH
Q 023717 164 GSKVPCRVDSPEDCARLIDV-NMKLKLGSGLVIGVP-IP---REHAASGRVIESAIQ 215 (278)
Q Consensus 164 g~~~~~r~d~~~e~A~~~~~-~~~l~l~~g~lvanP-iP---~e~~~~~~~i~~~i~ 215 (278)
+.-+.+++++.+++.. ...+| +--+||.|. +. .-..++.+++++.++
T Consensus 84 ----~~D~~d~~~v~~~~~~~~~~~g-~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 135 (269)
T 4dmm_A 84 ----KADVSQESEVEALFAAVIERWG-RLDVLVNNAGITRDTLLLRMKRDDWQSVLD 135 (269)
T ss_dssp ----ECCTTSHHHHHHHHHHHHHHHS-CCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred ----ECCCCCHHHHHHHHHHHHHHcC-CCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 2345677777777763 33344 223566553 11 112456777766554
No 157
>2obn_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: PG4; 2.30A {Anabaena variabilis}
Probab=27.81 E-value=1.3e+02 Score=28.28 Aligned_cols=63 Identities=14% Similarity=0.115 Sum_probs=45.9
Q ss_pred CCcEEEecccccccCCCccccccccchhhhcCCCeEEEecc--cccc-----------cchhhhHhHhhh-----CCeeE
Q 023717 86 GIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAG--IKSI-----------LDIPRTLEYLET-----HGVCV 147 (278)
Q Consensus 86 GI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG--~KsI-----------LDi~~TLE~LET-----~GV~V 147 (278)
.=++...-|-||...=. .+++.||..-++-|.+|+|.. =+.| =+.-.|+|+|.. .|++|
T Consensus 225 ~~d~vlVEGqGgl~~P~---~~~t~~ll~g~~p~~vILv~~~~~g~i~~~~~~~~p~l~~~i~t~e~l~~~~~~~~~~~V 301 (349)
T 2obn_A 225 NYDILHIEGQGSLLHPG---STATLPLIRGSQPTQLVLVHRAGQTHNGNNPHVPIPPLPEVIRLYETVASGGGAFGTVPV 301 (349)
T ss_dssp TCSEEEECCCCCTTSTT---CCTHHHHHHHHCCSEEEEEEETTCCBCSSCTTSBCCCHHHHHHHHHHHHHTTTTSCCCCE
T ss_pred CCCEEEEeCCCcccCcC---hHhHHHHHHHcCCCeEEEEECCCCceECCCCccCCCCHHHHHHHHHHHHHhhccCCCCcE
Confidence 67888889999975332 467889999999886666655 4556 333467777765 89999
Q ss_pred Eeec
Q 023717 148 AAYK 151 (278)
Q Consensus 148 ~gy~ 151 (278)
+|+-
T Consensus 302 ~Gi~ 305 (349)
T 2obn_A 302 VGIA 305 (349)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9985
No 158
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=27.80 E-value=59 Score=28.86 Aligned_cols=67 Identities=18% Similarity=0.161 Sum_probs=39.0
Q ss_pred HHHHHHHHCCCcEEEeccccccc-----CCCccccccccc----hhhhc---CCCeEEEecccccccchhhhHhHhhhCC
Q 023717 77 ATMFFASMVGIPVFVTGGIGGVH-----RHGEHTMDISSD----LTELG---RTPVAVVSAGIKSILDIPRTLEYLETHG 144 (278)
Q Consensus 77 aTm~lA~~aGI~VFaTGGIGGVH-----rg~~~t~DiSaD----L~eL~---rtpV~VVcaG~KsILDi~~TLE~LET~G 144 (278)
.+..+|+..|.+|++| .---=+ .|+.. +|-+.| +.++. .-.+++-|+|.. -+...++.|...|
T Consensus 166 ~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~lGa~~-i~~~~~~~~~~~~~~~~~g~D~vid~~g~~---~~~~~~~~l~~~G 240 (343)
T 3gaz_A 166 VAIQIALARGARVFAT-ARGSDLEYVRDLGATP-IDASREPEDYAAEHTAGQGFDLVYDTLGGP---VLDASFSAVKRFG 240 (343)
T ss_dssp HHHHHHHHTTCEEEEE-ECHHHHHHHHHHTSEE-EETTSCHHHHHHHHHTTSCEEEEEESSCTH---HHHHHHHHEEEEE
T ss_pred HHHHHHHHCCCEEEEE-eCHHHHHHHHHcCCCE-eccCCCHHHHHHHHhcCCCceEEEECCCcH---HHHHHHHHHhcCC
Confidence 4467788889999988 211000 03332 332223 33332 356888899964 3567788888888
Q ss_pred eeEE
Q 023717 145 VCVA 148 (278)
Q Consensus 145 V~V~ 148 (278)
.-|.
T Consensus 241 ~iv~ 244 (343)
T 3gaz_A 241 HVVS 244 (343)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 6554
No 159
>2xzm_B RPS0E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_B
Probab=27.79 E-value=42 Score=30.16 Aligned_cols=76 Identities=20% Similarity=0.178 Sum_probs=48.5
Q ss_pred cccchhhhHhHhhh-----------CCeeEEeecCC----------CCcceeecCCCCccCcccCCHHHHHHHHHHHHhc
Q 023717 129 SILDIPRTLEYLET-----------HGVCVAAYKTN----------EFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKL 187 (278)
Q Consensus 129 sILDi~~TLE~LET-----------~GV~V~gy~t~----------~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~~~l 187 (278)
.|+|+.+|+++|.. ..|.+||-+.. .+-+||.+ .+.-+|+.+.+... ..+
T Consensus 42 hIIdL~kT~~~L~~A~~~i~~i~~~~~iLfVgtk~~~~~~V~~~A~~~g~~yv~-~~RWlgG~LTN~~t--------~~~ 112 (241)
T 2xzm_B 42 HYINIEETWQKIKLAARVIAAVQHPEDVMVVCSRIYGQRAAIKFAGYTHCKSTS-SSRWTPGTLTNYQT--------LKY 112 (241)
T ss_dssp EEECHHHHHHHHHHHHHHHHHCSSGGGEEEECCSHHHHHHHHHHHHHHTCBCCC-CSSCCTTTTTCTTC--------TTC
T ss_pred EEEeHHHHHHHHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHhCCEEec-cccccCCcccCccc--------ccc
Confidence 79999999999973 34666665421 12345542 33345555554432 235
Q ss_pred CCCCeEEEEeCCCccCCCChHHHHHHHHHHHHHHHHcCC
Q 023717 188 KLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNI 226 (278)
Q Consensus 188 ~l~~g~lvanPiP~e~~~~~~~i~~~i~~Al~ea~~~gi 226 (278)
.+|.-++|.+|.-+ .+|++||...||
T Consensus 113 ~~PdlliV~Dp~~e-------------~~ai~EA~~l~I 138 (241)
T 2xzm_B 113 EEPRVLIVTDPRSD-------------FQAIKEASYVNI 138 (241)
T ss_dssp CCCSEEEESCTTTT-------------HHHHHHHTTTTC
T ss_pred CCCCEEEEECCCcc-------------hHHHHHHHHhCC
Confidence 67888888887422 368888888887
No 160
>1cbf_A Cobalt-precorrin-4 transmethylase; precorrin-4 methyltransferase, cobalamin biosynth methyltransferase; HET: SAH; 2.40A {Bacillus megaterium} SCOP: c.90.1.1 PDB: 2cbf_A*
Probab=27.67 E-value=74 Score=27.99 Aligned_cols=80 Identities=10% Similarity=0.053 Sum_probs=43.6
Q ss_pred cccchhhhcCC-CeEEEecccccccchhhhHhHhhhCCeeEEeecCCCCcceeecCCCCccCcccC-CHHHHHHHHHHHH
Q 023717 108 ISSDLTELGRT-PVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVD-SPEDCARLIDVNM 185 (278)
Q Consensus 108 iSaDL~eL~rt-pV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy~~~Sg~~~~~r~d-~~~e~A~~~~~~~ 185 (278)
...+|..+.+. ..+|+--+++ .+.+.++.|...|. . .+.|.++.+.-|.+-+..+. +.+|+++.+.. .
T Consensus 166 ~~~~l~~l~~~~~tlvl~~~~~---~~~~i~~~L~~~g~-----~-~~~~v~v~~~lg~~~E~i~~~tl~el~~~~~~-~ 235 (285)
T 1cbf_A 166 EFEKLTDLAKHKCTIALFLSST---LTKKVMKEFINAGW-----S-EDTPVVVVYKATWPDEKIVRTTVKDLDDAMRT-N 235 (285)
T ss_dssp GGGCHHHHHTTCSEEEEESCTT---CHHHHHHHHHHTTC-----C-TTCEEEEEESTTSTTCEEEEEEGGGHHHHHHH-T
T ss_pred hHHHHHHHhcCCCeEEEECcHH---HHHHHHHHHHhcCC-----C-CCCeEEEEEECCcCCcEEEEecHHHHHHHHHh-c
Confidence 34578888765 4566666655 46777888877542 2 35677777666655432221 45555443221 2
Q ss_pred hcCCCCeEEEEe
Q 023717 186 KLKLGSGLVIGV 197 (278)
Q Consensus 186 ~l~l~~g~lvan 197 (278)
.+..++-++|.+
T Consensus 236 ~~~~~~viiig~ 247 (285)
T 1cbf_A 236 GIRKQAMILAGW 247 (285)
T ss_dssp TCCSSEEEEESG
T ss_pred CCCCcEEEEEch
Confidence 244444445543
No 161
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=27.63 E-value=73 Score=26.78 Aligned_cols=93 Identities=11% Similarity=0.117 Sum_probs=51.3
Q ss_pred chhhhHhHhhhCCeeEEeecCCCCcceeecCCCCc-cC-cccCCHHHHHHHHHHHHhcCCCCeEEEEeC-CCccCC--CC
Q 023717 132 DIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSK-VP-CRVDSPEDCARLIDVNMKLKLGSGLVIGVP-IPREHA--AS 206 (278)
Q Consensus 132 Di~~TLE~LET~GV~V~gy~t~~fPaFy~~~Sg~~-~~-~r~d~~~e~A~~~~~~~~l~l~~g~lvanP-iP~e~~--~~ 206 (278)
|+..-.+.|+..|+.+.++.... ..|.....++. -| .+-...+..-+.++....||.+ .|+..| .|.... -.
T Consensus 49 ~~~~~~~~l~~~gl~~~~~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~i~~A~~lGa~--~v~~~~g~~~~~~~~~~ 125 (269)
T 3ngf_A 49 DADVIARELKQHNLTQVLFNMPP-GDWAAGERGMAAISGREQEFRDNVDIALHYALALDCR--TLHAMSGITEGLDRKAC 125 (269)
T ss_dssp CHHHHHHHHHHTTCEEEEEECCC-SCTTTTCCBCTTCTTCHHHHHHHHHHHHHHHHHTTCC--EEECCBCBCTTSCHHHH
T ss_pred CHHHHHHHHHHcCCcEEEEecCC-CccccCCCCcCCCccHHHHHHHHHHHHHHHHHHcCCC--EEEEccCCCCCCCHHHH
Confidence 67788889999999999887421 11111111111 01 1112334566677777788754 344433 233211 11
Q ss_pred hHHHHHHHHHHHHHHHHcCCC
Q 023717 207 GRVIESAIQSALREAREKNIT 227 (278)
Q Consensus 207 ~~~i~~~i~~Al~ea~~~gi~ 227 (278)
.+.+-+.+++....|++.||+
T Consensus 126 ~~~~~~~l~~l~~~a~~~Gv~ 146 (269)
T 3ngf_A 126 EETFIENFRYAADKLAPHGIT 146 (269)
T ss_dssp HHHHHHHHHHHHHHHGGGTCE
T ss_pred HHHHHHHHHHHHHHHHHcCCE
Confidence 234555666778888888885
No 162
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=27.61 E-value=48 Score=32.70 Aligned_cols=62 Identities=18% Similarity=0.112 Sum_probs=44.3
Q ss_pred CCCChHHHHHHHH---HHHHHHHHcCCCCccC---ChH-HHHHH-----HHHhC--CccHHHHHHHHHHHHHHHHHHHHH
Q 023717 203 HAASGRVIESAIQ---SALREAREKNITGNAE---TPF-LLARV-----NELTG--GLSLASNIALVKNNALIGAKISVA 268 (278)
Q Consensus 203 ~~~~~~~i~~~i~---~Al~ea~~~gi~Gk~v---TPf-lL~~i-----~elT~--G~Sl~aNiaLl~nNa~laa~IA~~ 268 (278)
.+|+.++|+++|+ +|-+.|++.|..|=++ ++| ||..+ ++.|+ |-|+ +|.+|+..+|-.+
T Consensus 144 ~~~t~~ei~~~i~~f~~aA~~a~~aGfDgVeih~a~gy~L~~qFlsp~~N~R~D~yGGs~-------enR~r~~~ei~~a 216 (690)
T 3k30_A 144 RAMTKQDIDDLRRWHRNAVRRSIEAGYDIVYVYGAHGYSGVHHFLSKRYNQRTDEYGGSL-------ENRMRLLRELLED 216 (690)
T ss_dssp EECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCSHHHHHHCTTTCCCCSTTSSSH-------HHHTHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcccccchHHHHhCCCccCCCccccCCCH-------HHHHHHHHHHHHH
Confidence 4699999999987 4556677889999998 788 88665 34444 3354 5667777777666
Q ss_pred HHH
Q 023717 269 LAQ 271 (278)
Q Consensus 269 ~~~ 271 (278)
..+
T Consensus 217 vr~ 219 (690)
T 3k30_A 217 TLD 219 (690)
T ss_dssp HHH
T ss_pred HHH
Confidence 544
No 163
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=27.46 E-value=2.7e+02 Score=23.14 Aligned_cols=46 Identities=7% Similarity=0.024 Sum_probs=25.0
Q ss_pred ccCCHHHHHHHHHHHHhcCCCCeEEEEeCC-----CccCCCChHHHHHHHH
Q 023717 170 RVDSPEDCARLIDVNMKLKLGSGLVIGVPI-----PREHAASGRVIESAIQ 215 (278)
Q Consensus 170 r~d~~~e~A~~~~~~~~l~l~~g~lvanPi-----P~e~~~~~~~i~~~i~ 215 (278)
.+.+++++.+++..-.+-.-+--+||.|.= +.-...+.+..++.++
T Consensus 67 d~~d~~~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 117 (251)
T 3orf_A 67 KDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMID 117 (251)
T ss_dssp SCSSHHHHHHHHHHHHTTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHH
T ss_pred EeCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCcccccCHHHHHHHHH
Confidence 377888888888765442223335665542 1123445555555443
No 164
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=27.42 E-value=2.2e+02 Score=24.10 Aligned_cols=99 Identities=13% Similarity=0.124 Sum_probs=51.8
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecCCCCcceeecCC
Q 023717 84 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETS 163 (278)
Q Consensus 84 ~aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy~~~S 163 (278)
+.|=.+++|||-||+-+ -+..-|.+-+ ..|++++--. ....+.++..++. |
T Consensus 25 l~~k~vlVTGas~gIG~------aia~~l~~~G-~~V~~~~r~~------~~~~~~~~~~~~~-----------~----- 75 (260)
T 3gem_A 25 LSSAPILITGASQRVGL------HCALRLLEHG-HRVIISYRTE------HASVTELRQAGAV-----------A----- 75 (260)
T ss_dssp --CCCEEESSTTSHHHH------HHHHHHHHTT-CCEEEEESSC------CHHHHHHHHHTCE-----------E-----
T ss_pred CCCCEEEEECCCCHHHH------HHHHHHHHCC-CEEEEEeCCh------HHHHHHHHhcCCe-----------E-----
Confidence 45668999999999944 4555555544 2355544322 2334555555421 1
Q ss_pred CCccCcccCCHHHHHHHHHHH-HhcCCCCeEEEEeCC---CccCCCChHHHHHHHH
Q 023717 164 GSKVPCRVDSPEDCARLIDVN-MKLKLGSGLVIGVPI---PREHAASGRVIESAIQ 215 (278)
Q Consensus 164 g~~~~~r~d~~~e~A~~~~~~-~~l~l~~g~lvanPi---P~e~~~~~~~i~~~i~ 215 (278)
++.-+.+++++.+++..- ..+| +--+||.|.= +.....+.+++++.++
T Consensus 76 ---~~~Dv~~~~~v~~~~~~~~~~~g-~iD~lv~nAg~~~~~~~~~~~~~~~~~~~ 127 (260)
T 3gem_A 76 ---LYGDFSCETGIMAFIDLLKTQTS-SLRAVVHNASEWLAETPGEEADNFTRMFS 127 (260)
T ss_dssp ---EECCTTSHHHHHHHHHHHHHHCS-CCSEEEECCCCCCCCCTTCHHHHHHHHHH
T ss_pred ---EECCCCCHHHHHHHHHHHHHhcC-CCCEEEECCCccCCCCCCCCHHHHHHHHH
Confidence 123466788888877643 3344 2234555531 2223445555555443
No 165
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=27.33 E-value=46 Score=25.05 Aligned_cols=95 Identities=22% Similarity=0.318 Sum_probs=53.5
Q ss_pred CCHHHHHHHHhcCCCcccccccchHHHHhcCCCchhhHHHHHHHHHHCCCcEEEecccccccCCCccccccccchhhhc-
Q 023717 38 LSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELG- 116 (278)
Q Consensus 38 l~~~el~~la~~~~~~~K~srRDl~~~~a~~~~GaTTVaaTm~lA~~aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~- 116 (278)
+|.+||..+-...+++.=+.-|+-...-.....|+.- ||. -++..-+.+|.
T Consensus 4 Is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~~------------ip~----------------~~l~~~~~~l~~ 55 (103)
T 3iwh_A 4 ITTDELKNKLLESKPVQIVDVRTDEETAMGYIPNAKL------------IPM----------------DTIPDNLNSFNK 55 (103)
T ss_dssp ECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTCEE------------CCG----------------GGGGGCGGGCCT
T ss_pred cCHHHHHHHHhCCCCeEEEECCChhHHhcCccCCccc------------Ccc----------------cchhhhhhhhcC
Confidence 4678886644333556667778755443333344422 110 02333455554
Q ss_pred CCCeEEEec-ccccccchhhhHhHhhhCCeeEEeecCCCCcceeecCCCCcc
Q 023717 117 RTPVAVVSA-GIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKV 167 (278)
Q Consensus 117 rtpV~VVca-G~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy~~~Sg~~~ 167 (278)
..||+|+|. |..| ....++|+.+|..++-+ .+-|.++ ...|+++
T Consensus 56 ~~~ivv~C~~G~rS----~~aa~~L~~~G~~~~~l-~GG~~~W--~~~g~pv 100 (103)
T 3iwh_A 56 NEIYYIVCAGGVRS----AKVVEYLEANGIDAVNV-EGGMHAW--GDEGLEI 100 (103)
T ss_dssp TSEEEEECSSSSHH----HHHHHHHHTTTCEEEEE-TTHHHHH--CSSSCBC
T ss_pred CCeEEEECCCCHHH----HHHHHHHHHcCCCEEEe-cChHHHH--HHCCCcc
Confidence 468999995 4444 35678999999988733 3444444 2445544
No 166
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=27.27 E-value=39 Score=34.49 Aligned_cols=62 Identities=23% Similarity=0.278 Sum_probs=39.5
Q ss_pred CCcEEEecccccccCCCccccccccchh-hhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecCC
Q 023717 86 GIPVFVTGGIGGVHRHGEHTMDISSDLT-ELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTN 153 (278)
Q Consensus 86 GI~VFaTGGIGGVHrg~~~t~DiSaDL~-eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~ 153 (278)
|=.+++|||.||+-+ -+..-|. +-+=..|++++--..+-=+...+++.|+.+|..|..+..|
T Consensus 530 ~~~~lItGg~~GlG~------aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~D 592 (795)
T 3slk_A 530 AGTVLVTGGTGALGA------EVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACD 592 (795)
T ss_dssp TSEEEEETTTSHHHH------HHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECC
T ss_pred ccceeeccCCCCcHH------HHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEee
Confidence 445899999999844 3443343 3332345555544334445677888899999888877643
No 167
>2elc_A Trp D, anthranilate phosphoribosyltransferase; structural genomics, NPPSFA, national project O structural and functional analyses; 1.55A {Thermus thermophilus} SCOP: a.46.2.1 c.27.1.1 PDB: 1v8g_A
Probab=27.26 E-value=34 Score=31.64 Aligned_cols=104 Identities=17% Similarity=0.177 Sum_probs=62.5
Q ss_pred CCHHHHHHHHhcCCCcc--cccccchHHHH----hcCCCchhhHHHHHHHHHHC-CC-----cEEEecccccccCCCccc
Q 023717 38 LSTEELERLAKLGSKAQ--KTARRDIAHVV----ATRGNGATTVSATMFFASMV-GI-----PVFVTGGIGGVHRHGEHT 105 (278)
Q Consensus 38 l~~~el~~la~~~~~~~--K~srRDl~~~~----a~~~~GaTTVaaTm~lA~~a-GI-----~VFaTGGIGGVHrg~~~t 105 (278)
||.+|.+.+-+. +. +++--.++..+ .++.+---+...|..+-+.+ -+ ++.=++|.||+.+ .|
T Consensus 13 Lt~eEa~~~~~~---i~~g~~~~~QiaAfL~alr~kget~~Eiag~~~am~~~~~~~~~~~~~~vD~~gTGGdg~---~t 86 (329)
T 2elc_A 13 LEEEEAYEVMRA---LMAGEVSPVRAAGLLVALSLRGERPHEIAAMARAMREAARPLRVHRRPLLDIVGTGGDGK---GL 86 (329)
T ss_dssp CCHHHHHHHHHH---HHTTCSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHSCCCCCCCSSEEEEEECCCCSS---CC
T ss_pred CCHHHHHHHHHH---HHcCCCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhCCCCCCCCCCeeEEcCCCCCCC---Cc
Confidence 778887766542 11 22222232222 24454444444443332221 22 2456899999844 59
Q ss_pred cccccchh-hhcCCCeEEEecccccccchhhhHhHhhhCCeeE
Q 023717 106 MDISSDLT-ELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCV 147 (278)
Q Consensus 106 ~DiSaDL~-eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V 147 (278)
|.||.=+. -++..-+-|+=-|-.++=--.-|.+.||..||++
T Consensus 87 fNiSt~~a~v~Aa~Gv~V~kHGnr~~ss~~GsaDvLeaLG~~~ 129 (329)
T 2elc_A 87 MNLSTLAALVAAAGGVAVAKHGNRAASSRAGSADLLEALGVDL 129 (329)
T ss_dssp CCCHHHHHHHHHHTTCEEEEEECCCTTTTCSHHHHHHHTTCCT
T ss_pred cccHHHHHHHHHhCCCCEEEeCCCCCCCcccHHHHHHhCCCCC
Confidence 99996542 3567667777777777777777999999999987
No 168
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=27.16 E-value=44 Score=25.19 Aligned_cols=43 Identities=14% Similarity=0.156 Sum_probs=26.3
Q ss_pred chhhhcCCCeEEE-----eccccc--ccchhhhHhHhhhCCeeEEeecCC
Q 023717 111 DLTELGRTPVAVV-----SAGIKS--ILDIPRTLEYLETHGVCVAAYKTN 153 (278)
Q Consensus 111 DL~eL~rtpV~VV-----caG~Ks--ILDi~~TLE~LET~GV~V~gy~t~ 153 (278)
+|.++...||+|. |..++. +=.+.+-.+.+...||.|++...+
T Consensus 24 ~l~~~~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~ 73 (160)
T 3lor_A 24 SNEDLRGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSV 73 (160)
T ss_dssp CHHHHTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECC
T ss_pred CHHHhCCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEecc
Confidence 3455655565554 666665 334455555556678999998753
No 169
>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2
Probab=27.15 E-value=67 Score=23.85 Aligned_cols=46 Identities=24% Similarity=0.248 Sum_probs=31.6
Q ss_pred cchhhhHhHhhhCCeeEEeecCCCCcceeecC-CCCccCcccCCHHH
Q 023717 131 LDIPRTLEYLETHGVCVAAYKTNEFPAFFTET-SGSKVPCRVDSPED 176 (278)
Q Consensus 131 LDi~~TLE~LET~GV~V~gy~t~~fPaFy~~~-Sg~~~~~r~d~~~e 176 (278)
=|+.++.+.|+.+|+++..-.....-.||.++ .|..+........+
T Consensus 75 ~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~ 121 (141)
T 1npb_A 75 EDFEPLSQRLEQAGVTIWKQNKSEGASFYFLDPDGHKLELHVGSLAA 121 (141)
T ss_dssp HHHHHHHHHHHHTTCCEEECCCSSSEEEEEECTTCCEEEEEECCHHH
T ss_pred HHHHHHHHHHHHCCCeEeccCCCceeEEEEECCCCCEEEEEECchhh
Confidence 38999999999999999864332233455544 68777766555544
No 170
>3fxa_A SIS domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Listeria monocytogenes str}
Probab=27.02 E-value=43 Score=27.30 Aligned_cols=59 Identities=8% Similarity=0.097 Sum_probs=38.8
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecC
Q 023717 84 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKT 152 (278)
Q Consensus 84 ~aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t 152 (278)
+.|+++++.....- ...++..+..-.++++.|..-.=-++-..++++..+|++|++...
T Consensus 69 ~~g~~~~~~~~~~~----------~~~~~~~~~~~dvvI~iS~sG~t~~~~~~~~~ak~~g~~vi~IT~ 127 (201)
T 3fxa_A 69 CIERPAVFLTPSDA----------VHGTLGVLQKEDILILISKGGNTGELLNLIPACKTKGSTLIGVTE 127 (201)
T ss_dssp HTTCCEEECCHHHH----------TTTGGGGCCTTCEEEEECSSSCCHHHHTTHHHHHHHTCEEEEEES
T ss_pred hcCCcEEEeCchHH----------HhhhhhcCCCCCEEEEEeCCCCCHHHHHHHHHHHHcCCeEEEEEC
Confidence 35999887643211 112344556666666665554446677788999999999999864
No 171
>2bib_A CBPE, teichoic acid phosphorylcholine esterase/ choline protein; choline-binding protein, PCE, phosphorylcholine estera hydrolase; HET: PC BTB; 1.92A {Streptococcus pneumoniae} SCOP: b.109.1.1 d.157.1.8 PDB: 1wra_A*
Probab=27.01 E-value=55 Score=31.16 Aligned_cols=59 Identities=10% Similarity=0.141 Sum_probs=42.8
Q ss_pred HCCCcEEEecccccccCC-CccccccccchhhhcCCCeEEEecccccccc--hhhhHhHhhhCCeeEEe
Q 023717 84 MVGIPVFVTGGIGGVHRH-GEHTMDISSDLTELGRTPVAVVSAGIKSILD--IPRTLEYLETHGVCVAA 149 (278)
Q Consensus 84 ~aGI~VFaTGGIGGVHrg-~~~t~DiSaDL~eL~rtpV~VVcaG~KsILD--i~~TLE~LET~GV~V~g 149 (278)
...+.|+..+ |.| ... -.|.++.+--+-.++|+|+|...--. -+.||+.|+.+|++|.-
T Consensus 218 ~~~~DvLkv~-----HHG~S~~--s~s~~fl~~v~P~~aiiS~g~~n~~~hP~~evl~~l~~~g~~v~~ 279 (547)
T 2bib_A 218 IGKVDLMKFN-----HHHDTNK--SNTKDFIKNLSPSLIVQTSDSLPWKNGVDSEYVNWLKERGIERIN 279 (547)
T ss_dssp HCCCSEEECT-----TTTBCSS--SSCHHHHHHHCCSEEEESBSSCSBSSSBCHHHHHHHHTTTCEEEE
T ss_pred ccceeEEEec-----cccCccc--CChHHHHHhcCCcEEEEcCCcccccCCCCHHHHHHHHhCCceEEE
Confidence 3578888865 555 222 24677877778889999999864433 45699999999999854
No 172
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=26.85 E-value=1.5e+02 Score=27.02 Aligned_cols=22 Identities=18% Similarity=0.357 Sum_probs=11.1
Q ss_pred hHHHHHHHHHHHHHCCCcccEE
Q 023717 6 NFETAKEVEAIVRNNGAVPATI 27 (278)
Q Consensus 6 Nle~A~~~E~~vR~~GavPATI 27 (278)
+.+...++=+.+|+.=-+|-++
T Consensus 110 ~~~~~~eiv~av~~~v~~PV~v 131 (350)
T 3b0p_A 110 DLARVREILKAMGEAVRVPVTV 131 (350)
T ss_dssp CHHHHHHHHHHHHHHCSSCEEE
T ss_pred CHHHHHHHHHHHHHHhCCceEE
Confidence 3445555555555533467444
No 173
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=26.83 E-value=19 Score=34.94 Aligned_cols=60 Identities=23% Similarity=0.281 Sum_probs=33.7
Q ss_pred cCCHHHHHHHHhcCCCccccc-----ccchHHHHhcCCCchhh--------HHHH--HHHHHHCCCc-EEEecccc
Q 023717 37 GLSTEELERLAKLGSKAQKTA-----RRDIAHVVATRGNGATT--------VSAT--MFFASMVGIP-VFVTGGIG 96 (278)
Q Consensus 37 Gl~~~el~~la~~~~~~~K~s-----rRDl~~~~a~~~~GaTT--------VaaT--m~lA~~aGI~-VFaTGGIG 96 (278)
|+|.+|++.+-....+..-+| -|||..+.+++-.-|.- ++-. .+.|.+-|++ +..|||||
T Consensus 266 g~s~~ev~~~Lnk~SGLlGlsG~s~D~R~l~~~~~~Gd~~A~lA~d~f~yri~k~IGa~aa~LggvDaIVFTgGIG 341 (415)
T 2e1z_A 266 GQTLSDLERVVNKESGLLGISGLSSDLRVLEKAWHEGHERARLAIKTFVHRIARHIAGHAASLHRLDGIIFTGGIG 341 (415)
T ss_dssp CCCHHHHHHHHHHSCHHHHHHSSCSCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTTCSSCCEEEEEHHHH
T ss_pred CCCHHHHHHHHhhccCcEEecCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECcccc
Confidence 467788877765444444333 46676665554322221 1111 1345566788 56699999
No 174
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=26.82 E-value=2.5e+02 Score=23.96 Aligned_cols=105 Identities=15% Similarity=0.214 Sum_probs=55.6
Q ss_pred HHCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecCCCCcceeecC
Q 023717 83 SMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTET 162 (278)
Q Consensus 83 ~~aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy~~~ 162 (278)
.+.|=.+++|||-||+-+ -+..-|.+-+- .|++++--. =.+..+.+.++..|..+..
T Consensus 29 ~l~gk~~lVTGas~GIG~------aia~~la~~G~-~V~~~~r~~---~~~~~~~~~~~~~~~~~~~------------- 85 (276)
T 3r1i_A 29 DLSGKRALITGASTGIGK------KVALAYAEAGA-QVAVAARHS---DALQVVADEIAGVGGKALP------------- 85 (276)
T ss_dssp CCTTCEEEEESTTSHHHH------HHHHHHHHTTC-EEEEEESSG---GGGHHHHHHHHHTTCCCEE-------------
T ss_pred CCCCCEEEEeCCCCHHHH------HHHHHHHHCCC-EEEEEeCCH---HHHHHHHHHHHhcCCeEEE-------------
Confidence 456778999999999844 45554544432 244443322 2234555556555533322
Q ss_pred CCCccCcccCCHHHHHHHHHHH-HhcCCCCeEEEEeCC----CccCCCChHHHHHHHH
Q 023717 163 SGSKVPCRVDSPEDCARLIDVN-MKLKLGSGLVIGVPI----PREHAASGRVIESAIQ 215 (278)
Q Consensus 163 Sg~~~~~r~d~~~e~A~~~~~~-~~l~l~~g~lvanPi----P~e~~~~~~~i~~~i~ 215 (278)
++.-+.+++++.+++..- .++| +--+||.|.= ..-..++.+++++.++
T Consensus 86 ----~~~Dl~d~~~v~~~~~~~~~~~g-~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 138 (276)
T 3r1i_A 86 ----IRCDVTQPDQVRGMLDQMTGELG-GIDIAVCNAGIVSVQAMLDMPLEEFQRIQD 138 (276)
T ss_dssp ----EECCTTCHHHHHHHHHHHHHHHS-CCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred ----EEcCCCCHHHHHHHHHHHHHHcC-CCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 123456778877777643 3344 2234555431 1223467777765544
No 175
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=26.77 E-value=1.6e+02 Score=26.45 Aligned_cols=12 Identities=50% Similarity=1.052 Sum_probs=5.7
Q ss_pred CCCcEEEecccc
Q 023717 85 VGIPVFVTGGIG 96 (278)
Q Consensus 85 aGI~VFaTGGIG 96 (278)
..|||++.|||.
T Consensus 161 ~~iPViaaGGI~ 172 (332)
T 2z6i_A 161 ISIPVIAAGGIA 172 (332)
T ss_dssp CSSCEEEESSCC
T ss_pred cCCCEEEECCCC
Confidence 344555544444
No 176
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=26.62 E-value=2.5e+02 Score=23.25 Aligned_cols=100 Identities=15% Similarity=0.215 Sum_probs=48.8
Q ss_pred cEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecCCCCcceeecCCCCcc
Q 023717 88 PVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKV 167 (278)
Q Consensus 88 ~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy~~~Sg~~~ 167 (278)
.+++|||-||+-+ -+..-|.+-+ ..|++++-... ....+.+.|+..|..+.. +
T Consensus 4 ~vlVTGas~gIG~------~ia~~l~~~G-~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~-----------------~ 56 (256)
T 1geg_A 4 VALVTGAGQGIGK------AIALRLVKDG-FAVAIADYNDA---TAKAVASEINQAGGHAVA-----------------V 56 (256)
T ss_dssp EEEEETTTSHHHH------HHHHHHHHTT-CEEEEEESCHH---HHHHHHHHHHHTTCCEEE-----------------E
T ss_pred EEEEECCCChHHH------HHHHHHHHCC-CEEEEEeCCHH---HHHHHHHHHHhcCCcEEE-----------------E
Confidence 5899999999844 3444444433 22333332211 233444555544432221 1
Q ss_pred CcccCCHHHHHHHHHHH-HhcCCCCeEEEEeC-C--C-ccCCCChHHHHHHHH
Q 023717 168 PCRVDSPEDCARLIDVN-MKLKLGSGLVIGVP-I--P-REHAASGRVIESAIQ 215 (278)
Q Consensus 168 ~~r~d~~~e~A~~~~~~-~~l~l~~g~lvanP-i--P-~e~~~~~~~i~~~i~ 215 (278)
+.-+.+++++.+++..- ..+| +--+||.|. + + .-..++.+..++.++
T Consensus 57 ~~D~~~~~~v~~~~~~~~~~~g-~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 108 (256)
T 1geg_A 57 KVDVSDRDQVFAAVEQARKTLG-GFDVIVNNAGVAPSTPIESITPEIVDKVYN 108 (256)
T ss_dssp ECCTTSHHHHHHHHHHHHHHTT-CCCEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred EecCCCHHHHHHHHHHHHHHhC-CCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 23456777877777643 3344 223456553 1 1 112456666665443
No 177
>3snr_A Extracellular ligand-binding receptor; structural genomics, APC102214, PSI-biology, midwest center structural genomics, MCSG; HET: MSE TYR PHE; 1.49A {Rhodopseudomonas palustris} PDB: 3uk0_A* 3t23_A* 3ukj_A* 4eyo_A* 4eyq_A* 3tx6_A* 4f8j_A* 4fb4_A*
Probab=26.62 E-value=2.2e+02 Score=24.02 Aligned_cols=127 Identities=8% Similarity=-0.079 Sum_probs=0.0
Q ss_pred CCCchhhHHHHHHHHHHCCCcEEEecccccccCCCccccccccc-----------hhhhcCCCeEEEecccccccchhhh
Q 023717 68 RGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSD-----------LTELGRTPVAVVSAGIKSILDIPRT 136 (278)
Q Consensus 68 ~~~GaTTVaaTm~lA~~aGI~VFaTGGIGGVHrg~~~t~DiSaD-----------L~eL~rtpV~VVcaG~KsILDi~~T 136 (278)
+..+..+..+.+-++...+|+++..+..--........|-++.| |.+++...|++|...--.--+.-..
T Consensus 75 g~~~s~~~~~~~~~~~~~~ip~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~ia~i~~~~~~~~~~~~~ 154 (362)
T 3snr_A 75 GSSVTPPSVAISNVANEAQIPHIALAPLPITPERAKWSVVMPQPIPIMGKVLYEHMKKNNVKTVGYIGYSDSYGDLWFND 154 (362)
T ss_dssp ECSSHHHHHHHHHHHHHHTCCEEESSCCCCCTTTTTTEEECSCCHHHHHHHHHHHHHHTTCCEEEEEEESSHHHHHHHHH
T ss_pred cCCCcHHHHHHHHHHHHcCccEEEecCCccccCCCCcEEecCCChHHHHHHHHHHHHhcCCCEEEEEecCchHHHHHHHH
Q ss_pred H-hHhhhCCeeEEee-----cCCCCcceeec--CCCCccCcccCCHHHHHHHHHHHHhcCCCCeEE
Q 023717 137 L-EYLETHGVCVAAY-----KTNEFPAFFTE--TSGSKVPCRVDSPEDCARLIDVNMKLKLGSGLV 194 (278)
Q Consensus 137 L-E~LET~GV~V~gy-----~t~~fPaFy~~--~Sg~~~~~r~d~~~e~A~~~~~~~~l~l~~g~l 194 (278)
+ +.|+.+|++|+.. ++.+|...+.+ .++...=+-..+..+++.++++-+++|+...++
T Consensus 155 ~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~l~~~~~dav~~~~~~~~a~~~~~~~~~~g~~~p~i 220 (362)
T 3snr_A 155 LKKQGEAMGLKIVGEERFARPDTSVAGQALKLVAANPDAILVGASGTAAALPQTTLRERGYNGLIY 220 (362)
T ss_dssp HHHHHHHTTCEEEEEEEECTTCSCCHHHHHHHHHHCCSEEEEECCHHHHHHHHHHHHHTTCCSEEE
T ss_pred HHHHHHHcCCEEEEEeecCCCCCCHHHHHHHHHhcCCCEEEEecCcchHHHHHHHHHHcCCCccEE
No 178
>3i09_A Periplasmic branched-chain amino acid-binding Pro; type I periplasmic binding protein, structural genomics, JOI for structural genomics; HET: MSE CIT; 1.80A {Burkholderia mallei}
Probab=26.57 E-value=1.9e+02 Score=24.92 Aligned_cols=129 Identities=12% Similarity=0.110 Sum_probs=0.0
Q ss_pred CCCchhhHHHHHHHHHHCCCcEEEecccccccCC---Cccccccccc-----------hhhhcCCCeEEEecccccccch
Q 023717 68 RGNGATTVSATMFFASMVGIPVFVTGGIGGVHRH---GEHTMDISSD-----------LTELGRTPVAVVSAGIKSILDI 133 (278)
Q Consensus 68 ~~~GaTTVaaTm~lA~~aGI~VFaTGGIGGVHrg---~~~t~DiSaD-----------L~eL~rtpV~VVcaG~KsILDi 133 (278)
+-....+..+.+-++...+|+++..+...--..+ ....|-++.| |.+++-..|++|...--.=.+.
T Consensus 77 G~~~s~~~~a~~~~~~~~~ip~i~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~~~g~~~vaii~~~~~~g~~~ 156 (375)
T 3i09_A 77 GGTNSATALSMNQVAAEKKKVYINIGAGADTLTNEQCTPYTVHYAYDTMALAKGTGSAVVKQGGKTWFFLTADYAFGKAL 156 (375)
T ss_dssp ECSCHHHHHHHHHHHHHHTCEEEECSCCCGGGGTTTCCTTEEECSCCHHHHHHHHHHHHHHTTCCEEEEEEESSHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHcCceEEEeCCCchhhhcccCCCcEEEeeCChHHHHHHHHHHHHHcCCceEEEEecccHHHHHH
Q ss_pred hhhHh-HhhhCCeeEEee-----cCCCCcceeec--CCCCccCcccCCHHHHHHHHHHHHhcCCCCe-EEEE
Q 023717 134 PRTLE-YLETHGVCVAAY-----KTNEFPAFFTE--TSGSKVPCRVDSPEDCARLIDVNMKLKLGSG-LVIG 196 (278)
Q Consensus 134 ~~TLE-~LET~GV~V~gy-----~t~~fPaFy~~--~Sg~~~~~r~d~~~e~A~~~~~~~~l~l~~g-~lva 196 (278)
-..++ .|+.+|++|+.. ++.+|.....+ .++..+=+-..+..+++.++++-+++|+... .++.
T Consensus 157 ~~~~~~~~~~~G~~v~~~~~~~~~~~d~~~~l~~i~~~~~d~v~~~~~~~~~~~~~~~~~~~g~~~~~~i~g 228 (375)
T 3i09_A 157 EKNTADVVKANGGKVLGEVRHPLSASDFSSFLLQAQSSKAQILGLANAGGDTVNAIKAAKEFGITKTMKLAA 228 (375)
T ss_dssp HHHHHHHHHHTTCEEEEEEEECTTCSCCHHHHHHHHHTCCSEEEEECCHHHHHHHHHHHHHTTGGGTCEEEE
T ss_pred HHHHHHHHHHcCCEEeeeeeCCCCCccHHHHHHHHHhCCCCEEEEecCchhHHHHHHHHHHcCCCcCceEEe
No 179
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=26.55 E-value=2.6e+02 Score=23.94 Aligned_cols=104 Identities=13% Similarity=0.109 Sum_probs=54.1
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecCCCCcceeecCC
Q 023717 84 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETS 163 (278)
Q Consensus 84 ~aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy~~~S 163 (278)
+.|=.+++|||-||+-+ -+..-|.+-+- .|++++- +-=.+..+.+.|+..|..+..+
T Consensus 26 ~~~k~~lVTGas~GIG~------aia~~la~~G~-~V~~~~r---~~~~~~~~~~~l~~~~~~~~~~------------- 82 (283)
T 3v8b_A 26 QPSPVALITGAGSGIGR------ATALALAADGV-TVGALGR---TRTEVEEVADEIVGAGGQAIAL------------- 82 (283)
T ss_dssp -CCCEEEEESCSSHHHH------HHHHHHHHTTC-EEEEEES---SHHHHHHHHHHHTTTTCCEEEE-------------
T ss_pred CCCCEEEEECCCCHHHH------HHHHHHHHCCC-EEEEEeC---CHHHHHHHHHHHHhcCCcEEEE-------------
Confidence 45667999999999954 34443443332 2333322 1123445555665555444322
Q ss_pred CCccCcccCCHHHHHHHHHHH-HhcCCCCeEEEEeC-C----CccCCCChHHHHHHHH
Q 023717 164 GSKVPCRVDSPEDCARLIDVN-MKLKLGSGLVIGVP-I----PREHAASGRVIESAIQ 215 (278)
Q Consensus 164 g~~~~~r~d~~~e~A~~~~~~-~~l~l~~g~lvanP-i----P~e~~~~~~~i~~~i~ 215 (278)
+.-+.+++++.+++..- ..+|--. +||.|. + ..-..++.+++++.++
T Consensus 83 ----~~Dv~d~~~v~~~~~~~~~~~g~iD-~lVnnAg~~~~~~~~~~~~~~~~~~~~~ 135 (283)
T 3v8b_A 83 ----EADVSDELQMRNAVRDLVLKFGHLD-IVVANAGINGVWAPIDDLKPFEWDETIA 135 (283)
T ss_dssp ----ECCTTCHHHHHHHHHHHHHHHSCCC-EEEECCCCCCCBCCTTTSCHHHHHHHHH
T ss_pred ----EccCCCHHHHHHHHHHHHHHhCCCC-EEEECCCCCCCCCchhhCCHHHHHHHHH
Confidence 33466788887777643 3344222 455543 2 1223567777666554
No 180
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=26.48 E-value=53 Score=31.36 Aligned_cols=167 Identities=13% Similarity=0.113 Sum_probs=84.9
Q ss_pred CCchhHHHHHHHHHHHHHC----CCcccEEEEEcCceeecCCHHHHHHHHhcCCCcccccccchHHHHhcCCCchhhHHH
Q 023717 2 PYPQNFETAKEVEAIVRNN----GAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSA 77 (278)
Q Consensus 2 PyP~Nle~A~~~E~~vR~~----GavPATIaii~G~i~VGl~~~el~~la~~~~~~~K~srRDl~~~~a~~~~GaTTVaa 77 (278)
|-|+.-.++..+.+++++. | =|-.+-++.|...+| +.|.+. +.+.+++ -+|+|.+.-
T Consensus 173 ps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g~~~~g------~~L~~~-p~vd~I~-----------FTGS~~~G~ 233 (463)
T 2h5g_A 173 GGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNTREEVE------DLCRLD-KMIDLII-----------PRGSSQLVR 233 (463)
T ss_dssp CCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCTTCCC--------------CCCSEEE-----------EESCHHHHH
T ss_pred CCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcCCHHHH------HHHHhC-CCcCEEE-----------EECCHHHHH
Confidence 5566677788888888887 8 566888887743332 223332 3466665 467776643
Q ss_pred HHHHHHHCC-CcEEEecccccccCCCccccccccchhhhcCC------CeEEEecccc------cccc---hhhhHhHhh
Q 023717 78 TMFFASMVG-IPVFVTGGIGGVHRHGEHTMDISSDLTELGRT------PVAVVSAGIK------SILD---IPRTLEYLE 141 (278)
Q Consensus 78 Tm~lA~~aG-I~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rt------pV~VVcaG~K------sILD---i~~TLE~LE 141 (278)
.+++.++ +|| |.-+||.-. .=.|-++||..-.+. ---=+|..++ +|.| +.+-++.+.
T Consensus 234 --~i~~~aal~pv--~lElGGk~p---~iV~~dADl~~Aa~~i~~~~f~nGQ~C~a~~rvlV~~~i~d~p~~~~~i~~~~ 306 (463)
T 2h5g_A 234 --DIQKAAKGIPV--MGHSEGICH---MYVDSEASVDKVTRLVRDSKCEYPAACNALETLLIHRDLLRTPLFDQIIDMLR 306 (463)
T ss_dssp --HHHHHCSSSCB--CSCSCCCEE---EEECTTCCTTTHHHHHHHHHHSCTTSTTSEEEEEEEGGGTTSHHHHHHHHHHH
T ss_pred --HHHHhcCCCCE--EEecCCcce---EEEcCCCCHHHHHHHHHHHhccCCCccccCcEEEEeccccchHHHHHHHHHHH
Confidence 3445555 776 667777211 122334565442110 0012233333 4444 344577788
Q ss_pred hCCeeEEeecCCCCcc-eeecCCCC-----ccC----cccCCHHHHHHHHHHHHhcCCCCeEEEE
Q 023717 142 THGVCVAAYKTNEFPA-FFTETSGS-----KVP----CRVDSPEDCARLIDVNMKLKLGSGLVIG 196 (278)
Q Consensus 142 T~GV~V~gy~t~~fPa-Fy~~~Sg~-----~~~----~r~d~~~e~A~~~~~~~~l~l~~g~lva 196 (278)
..|..++|=+...-.+ |+..++.+ --| .+++|.+|+-+++.. ..+||..+ |++
T Consensus 307 ~~Ga~v~~G~~~~~~g~~~~~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN~-~~~gLaa~-v~t 369 (463)
T 2h5g_A 307 VEQVKIHAGPKFASYLTFSPSEVKSLRTEYGDLELCIEVVDNVQDAIDHIHK-YGSSHTDV-IVT 369 (463)
T ss_dssp HTTCEEEECHHHHC---------CCSSCCCCSSEEEEEEESSHHHHHHHHHH-HCCSSEEE-EEC
T ss_pred hCCCEEEeCCcccccCccCCCCchHHhccccCceEEEEEeCCHHHHHHHHHc-CCCCceEE-EEe
Confidence 8999888543211123 33222211 111 367899998888875 44444444 444
No 181
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=26.46 E-value=2.3e+02 Score=26.84 Aligned_cols=50 Identities=22% Similarity=0.199 Sum_probs=21.0
Q ss_pred eEEEec-ccccccchhhhHhHhhhCCeeEEee-----cCCCCcceeec--CCCCccCcccCC
Q 023717 120 VAVVSA-GIKSILDIPRTLEYLETHGVCVAAY-----KTNEFPAFFTE--TSGSKVPCRVDS 173 (278)
Q Consensus 120 V~VVca-G~KsILDi~~TLE~LET~GV~V~gy-----~t~~fPaFy~~--~Sg~~~~~r~d~ 173 (278)
+-|+++ |..+--||.+-|+ .|.--+.. +|+|.|+=+.- ..-+|.-|-+.|
T Consensus 247 IPVIA~GGI~~~~di~kala----lGAd~V~vGt~f~~t~Es~~~~~~~~g~~~k~y~Gm~s 304 (400)
T 3ffs_A 247 IPIIADGGIRYSGDIGKALA----VGASSVMIGSILAGTEESPGEKELIGDTVYKYYRGMGS 304 (400)
T ss_dssp CCEEEESCCCSHHHHHHHHT----TTCSEEEECGGGTTBTTSSCCEEESSSSEEEC------
T ss_pred CCEEecCCCCCHHHHHHHHH----cCCCEEEEChHHhcCCCCCchhhhcCCeeeeeecCcch
Confidence 333443 4445555555444 24444333 36788774443 333444333443
No 182
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=26.30 E-value=24 Score=36.11 Aligned_cols=77 Identities=19% Similarity=0.196 Sum_probs=46.8
Q ss_pred CchhhHHHHHHHHHHCCCcEEEeccccc---ccCCCcccc-----ccccchhhhc---CCCeEEEecccccccchhhhHh
Q 023717 70 NGATTVSATMFFASMVGIPVFVTGGIGG---VHRHGEHTM-----DISSDLTELG---RTPVAVVSAGIKSILDIPRTLE 138 (278)
Q Consensus 70 ~GaTTVaaTm~lA~~aGI~VFaTGGIGG---VHrg~~~t~-----DiSaDL~eL~---rtpV~VVcaG~KsILDi~~TLE 138 (278)
+|+.= .+.+.+|+..|.+||+|.+--- ...|+...+ |...++.++. .-.|++=|.|... +...++
T Consensus 355 aGgvG-~~aiqlAk~~Ga~V~~t~~~~k~~~l~lga~~v~~~~~~~~~~~i~~~t~g~GvDvVld~~gg~~---~~~~l~ 430 (795)
T 3slk_A 355 AGGVG-MAAIQLARHLGAEVYATASEDKWQAVELSREHLASSRTCDFEQQFLGATGGRGVDVVLNSLAGEF---ADASLR 430 (795)
T ss_dssp TBHHH-HHHHHHHHHTTCCEEEECCGGGGGGSCSCGGGEECSSSSTHHHHHHHHSCSSCCSEEEECCCTTT---THHHHT
T ss_pred CCHHH-HHHHHHHHHcCCEEEEEeChHHhhhhhcChhheeecCChhHHHHHHHHcCCCCeEEEEECCCcHH---HHHHHH
Confidence 34433 3557889999999999986430 001232222 3333344443 2457787888754 378889
Q ss_pred HhhhCCeeEEeec
Q 023717 139 YLETHGVCVAAYK 151 (278)
Q Consensus 139 ~LET~GV~V~gy~ 151 (278)
.|...|.-|. ++
T Consensus 431 ~l~~~Gr~v~-iG 442 (795)
T 3slk_A 431 MLPRGGRFLE-LG 442 (795)
T ss_dssp SCTTCEEEEE-CC
T ss_pred HhcCCCEEEE-ec
Confidence 9998887554 54
No 183
>2o0b_A 3-phosphoshikimate 1-carboxyvinyltransferase; shikimate pathway, EPSP synthase, structural genomics; HET: S3P; 1.15A {Mycobacterium tuberculosis} PDB: 2o0d_A* 2o0e_A* 2o0x_A* 2o0z_A* 2o15_A 2bjb_A
Probab=26.28 E-value=3.8e+02 Score=25.28 Aligned_cols=97 Identities=16% Similarity=0.177 Sum_probs=58.6
Q ss_pred CCCcccc--ccccchhh-------hcCCCeEEEecc--cccccchhhhHhHhhhCCeeEEeecCCCCcceeecCCCCc-c
Q 023717 100 RHGEHTM--DISSDLTE-------LGRTPVAVVSAG--IKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSK-V 167 (278)
Q Consensus 100 rg~~~t~--DiSaDL~e-------L~rtpV~VVcaG--~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy~~~Sg~~-~ 167 (278)
+|.+-++ |+|+--++ +..-...|...| ..+-=+|..|+++|+..|+.|-+.+++ .|......++ .
T Consensus 156 ~g~~i~i~~d~Ssq~~salllAA~~~~g~~~I~~~~~~~~s~p~i~~t~~~L~~~Ga~I~~~~~~---~i~I~g~~l~g~ 232 (450)
T 2o0b_A 156 AGGTVAIDASASSQFVSGLLLSAASFTDGLTVQHTGSSLPSAPHIAMTAAMLRQAGVDIDDSTPN---RWQVRPGPVAAR 232 (450)
T ss_dssp CCEEEEECCTTCTHHHHHHHHHGGGSTTCEEEEECSSCCCCHHHHHHHHHHHHHTTCCEECCSTT---EEEECCCCCCCC
T ss_pred cCcEEEcCCCCCHHHHHHHHHHHHHcCCCeEEEeCCCCcCCCcHHHHHHHHHHHCCCeEEecCCc---EEEEECCCCcCc
Confidence 3444444 46664322 444456666665 467778899999999999999744333 2333332222 2
Q ss_pred Cccc-CCHHHHHHHHHHHHhcCCCCeEEEEeCCCcc
Q 023717 168 PCRV-DSPEDCARLIDVNMKLKLGSGLVIGVPIPRE 202 (278)
Q Consensus 168 ~~r~-d~~~e~A~~~~~~~~l~l~~g~lvanPiP~e 202 (278)
+|.+ .|..+++-.+-+ -.+- ++-+.|-| ++.+
T Consensus 233 ~~~v~~D~s~A~~~laa-aa~~-~g~v~i~~-v~~~ 265 (450)
T 2o0b_A 233 RWDIEPDLTNAVAFLSA-AVVS-GGTVRITG-WPRV 265 (450)
T ss_dssp CEECCBCHHHHHHHHHH-HHHH-TCEEEETT-CCSS
T ss_pred eEEcCCCHHHHHHHHHH-HHhc-CCeEEECC-CCcc
Confidence 5666 678888777766 4442 45677776 4443
No 184
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=26.20 E-value=1.4e+02 Score=25.38 Aligned_cols=104 Identities=13% Similarity=0.115 Sum_probs=54.7
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecCCCCcceeecCC
Q 023717 84 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETS 163 (278)
Q Consensus 84 ~aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy~~~S 163 (278)
+.|=.+++|||-||+-+ -+..-|.+-+- .|++++--. -....+.+.++..|..+..+
T Consensus 26 l~~k~~lVTGas~GIG~------aia~~la~~G~-~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~------------- 82 (270)
T 3ftp_A 26 LDKQVAIVTGASRGIGR------AIALELARRGA-MVIGTATTE---AGAEGIGAAFKQAGLEGRGA------------- 82 (270)
T ss_dssp TTTCEEEETTCSSHHHH------HHHHHHHHTTC-EEEEEESSH---HHHHHHHHHHHHHTCCCEEE-------------
T ss_pred CCCCEEEEECCCCHHHH------HHHHHHHHCCC-EEEEEeCCH---HHHHHHHHHHHhcCCcEEEE-------------
Confidence 45667999999999944 34444444432 233333211 12344555666655444322
Q ss_pred CCccCcccCCHHHHHHHHHH-HHhcCCCCeEEEEeC-CC---ccCCCChHHHHHHHH
Q 023717 164 GSKVPCRVDSPEDCARLIDV-NMKLKLGSGLVIGVP-IP---REHAASGRVIESAIQ 215 (278)
Q Consensus 164 g~~~~~r~d~~~e~A~~~~~-~~~l~l~~g~lvanP-iP---~e~~~~~~~i~~~i~ 215 (278)
..-+.+++++.+++.. ..++|- --+||.|. +. .-..++.+++++.++
T Consensus 83 ----~~Dv~d~~~v~~~~~~~~~~~g~-iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 134 (270)
T 3ftp_A 83 ----VLNVNDATAVDALVESTLKEFGA-LNVLVNNAGITQDQLAMRMKDDEWDAVID 134 (270)
T ss_dssp ----ECCTTCHHHHHHHHHHHHHHHSC-CCEEEECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred ----EEeCCCHHHHHHHHHHHHHHcCC-CCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 2345677777777763 334442 23466553 11 123456777766554
No 185
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=26.11 E-value=1.2e+02 Score=26.31 Aligned_cols=15 Identities=27% Similarity=0.412 Sum_probs=10.9
Q ss_pred HHHC-CCcEEEecccc
Q 023717 82 ASMV-GIPVFVTGGIG 96 (278)
Q Consensus 82 A~~a-GI~VFaTGGIG 96 (278)
.... .||+++||||.
T Consensus 161 ~~~~~~ipvvaiGGI~ 176 (225)
T 1mxs_A 161 GGPFGDIRFCPTGGVN 176 (225)
T ss_dssp HTTTTTCEEEEBSSCC
T ss_pred HhhCCCCeEEEECCCC
Confidence 3344 79999998884
No 186
>4dxd_A Cell division protein FTSZ; rossmann fold, GTPase, GTP binding, cell cycle-inhibitor COM; HET: GDP 9PC; 2.01A {Staphylococcus aureus} PDB: 3vo8_A*
Probab=26.02 E-value=51 Score=31.80 Aligned_cols=52 Identities=19% Similarity=0.333 Sum_probs=32.8
Q ss_pred EEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecCCCCcceeecCCCCccC
Q 023717 89 VFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVP 168 (278)
Q Consensus 89 VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy~~~Sg~~~~ 168 (278)
||+|.|+|| |- -+|.-++| .|.++.+|+.+++. +..|
T Consensus 105 ffItagmGG---GT---------------------GSGaapvI-----aeiake~g~LtvsV--------------Vt~P 141 (396)
T 4dxd_A 105 VFVTSGMGG---GT---------------------GTGAAPVV-----AKIAKEMGALTVGV--------------VTRP 141 (396)
T ss_dssp EEEEEETTS---SH---------------------HHHHHHHH-----HHHHHHTTCEEEEE--------------EEEC
T ss_pred EEEEeccCC---Cc---------------------cccHHHHH-----HHHHHhcCCceEEE--------------EeCC
Confidence 999999998 42 46666664 35666778777765 3446
Q ss_pred cccCCHHHHHHHHHH
Q 023717 169 CRVDSPEDCARLIDV 183 (278)
Q Consensus 169 ~r~d~~~e~A~~~~~ 183 (278)
|.++...+.-.....
T Consensus 142 f~~Eg~~r~yNA~lg 156 (396)
T 4dxd_A 142 FSFEGRKRQTQAAAG 156 (396)
T ss_dssp CGGGCHHHHHHHHHH
T ss_pred ccccchHHHHHHHHH
Confidence 666665554444333
No 187
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=25.97 E-value=78 Score=27.95 Aligned_cols=72 Identities=18% Similarity=0.204 Sum_probs=38.2
Q ss_pred HHHHHHHHCCCcEEEecccccc-----cCCCccccccc-cch----hhh-cCCCeEEEecccccccchhhhHhHhhhCCe
Q 023717 77 ATMFFASMVGIPVFVTGGIGGV-----HRHGEHTMDIS-SDL----TEL-GRTPVAVVSAGIKSILDIPRTLEYLETHGV 145 (278)
Q Consensus 77 aTm~lA~~aGI~VFaTGGIGGV-----Hrg~~~t~DiS-aDL----~eL-~rtpV~VVcaG~KsILDi~~TLE~LET~GV 145 (278)
.++.+|+..|.+|++|..---- ..|+...+|.+ .|+ .++ ....+++-|+|..+. +...++.|...|.
T Consensus 179 ~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~d~~~~~~~~~~~~~~~~~d~vid~~g~~~~--~~~~~~~l~~~G~ 256 (339)
T 1rjw_A 179 VAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPA--FQSAYNSIRRGGA 256 (339)
T ss_dssp HHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEEEEESSCCHHH--HHHHHHHEEEEEE
T ss_pred HHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEecCCCccHHHHHHHHhCCCCEEEECCCCHHH--HHHHHHHhhcCCE
Confidence 4455666677777776631100 01333344544 232 222 345688889987443 3566778877774
Q ss_pred eEEeec
Q 023717 146 CVAAYK 151 (278)
Q Consensus 146 ~V~gy~ 151 (278)
- +-++
T Consensus 257 ~-v~~g 261 (339)
T 1rjw_A 257 C-VLVG 261 (339)
T ss_dssp E-EECC
T ss_pred E-EEec
Confidence 3 3343
No 188
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=25.92 E-value=2.8e+02 Score=22.95 Aligned_cols=101 Identities=20% Similarity=0.186 Sum_probs=50.0
Q ss_pred cEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecCCCCcceeecCCCCcc
Q 023717 88 PVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKV 167 (278)
Q Consensus 88 ~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy~~~Sg~~~ 167 (278)
.+++|||-||+-+ -+..-|.+-+- .|++++--... .++..+.+.|+..|..+..+
T Consensus 4 ~vlVTGas~gIG~------~ia~~l~~~G~-~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~----------------- 58 (258)
T 3a28_C 4 VAMVTGGAQGIGR------GISEKLAADGF-DIAVADLPQQE-EQAAETIKLIEAADQKAVFV----------------- 58 (258)
T ss_dssp EEEEETTTSHHHH------HHHHHHHHHTC-EEEEEECGGGH-HHHHHHHHHHHTTTCCEEEE-----------------
T ss_pred EEEEeCCCcHHHH------HHHHHHHHCCC-EEEEEeCCcch-HHHHHHHHHHHhcCCcEEEE-----------------
Confidence 5899999999944 45555555442 34443322211 01344555665554333221
Q ss_pred CcccCCHHHHHHHHHH-HHhcCCCCeEEEEeC-CC---ccCCCChHHHHHHH
Q 023717 168 PCRVDSPEDCARLIDV-NMKLKLGSGLVIGVP-IP---REHAASGRVIESAI 214 (278)
Q Consensus 168 ~~r~d~~~e~A~~~~~-~~~l~l~~g~lvanP-iP---~e~~~~~~~i~~~i 214 (278)
+.-+.+++++.+++.. ...+|-- -+||.|. +. .-..++.+.+++.+
T Consensus 59 ~~Dv~~~~~v~~~~~~~~~~~g~i-D~lv~nAg~~~~~~~~~~~~~~~~~~~ 109 (258)
T 3a28_C 59 GLDVTDKANFDSAIDEAAEKLGGF-DVLVNNAGIAQIKPLLEVTEEDLKQIY 109 (258)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHTCC-CEEEECCCCCCCCCGGGCCHHHHHHHH
T ss_pred EccCCCHHHHHHHHHHHHHHhCCC-CEEEECCCCCCCCChhhCCHHHHHHHH
Confidence 2345567777776653 2334322 2455553 11 11245666666543
No 189
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=25.86 E-value=54 Score=28.86 Aligned_cols=72 Identities=13% Similarity=0.125 Sum_probs=42.4
Q ss_pred HHHHHHHHHHCCCcEEEeccccccc-----CCCcccccccc-ch----hh-hcCCCeEEEecccccccchhhhHhHhhhC
Q 023717 75 VSATMFFASMVGIPVFVTGGIGGVH-----RHGEHTMDISS-DL----TE-LGRTPVAVVSAGIKSILDIPRTLEYLETH 143 (278)
Q Consensus 75 VaaTm~lA~~aGI~VFaTGGIGGVH-----rg~~~t~DiSa-DL----~e-L~rtpV~VVcaG~KsILDi~~TLE~LET~ 143 (278)
=..++.+|+..|.+|++|..----. .|+...+|.+. |+ .+ .+.-.+++.|+|..+. +...++.|...
T Consensus 179 G~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~d~vid~~g~~~~--~~~~~~~l~~~ 256 (340)
T 3s2e_A 179 GHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVLVTAVSPKA--FSQAIGMVRRG 256 (340)
T ss_dssp HHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEEEESSCCHHH--HHHHHHHEEEE
T ss_pred HHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHhCCCCCEEEEeCCCHHH--HHHHHHHhccC
Confidence 3456788899999999997521100 13444444332 22 22 2344678888885544 34667888877
Q ss_pred CeeEE
Q 023717 144 GVCVA 148 (278)
Q Consensus 144 GV~V~ 148 (278)
|.-|.
T Consensus 257 G~iv~ 261 (340)
T 3s2e_A 257 GTIAL 261 (340)
T ss_dssp EEEEE
T ss_pred CEEEE
Confidence 76543
No 190
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=25.73 E-value=2.1e+02 Score=25.00 Aligned_cols=104 Identities=17% Similarity=0.173 Sum_probs=62.5
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecCCCCcceeecCC
Q 023717 84 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETS 163 (278)
Q Consensus 84 ~aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy~~~S 163 (278)
+-|=.+++|||-+|+-| -+..-|. +--.-||..+- +-=.+..+.+.|+..|..+..|.
T Consensus 5 L~gKvalVTGas~GIG~------aiA~~la---~~Ga~Vv~~~~-~~~~~~~~~~~i~~~g~~~~~~~------------ 62 (254)
T 4fn4_A 5 LKNKVVIVTGAGSGIGR------AIAKKFA---LNDSIVVAVEL-LEDRLNQIVQELRGMGKEVLGVK------------ 62 (254)
T ss_dssp GTTCEEEEETTTSHHHH------HHHHHHH---HTTCEEEEEES-CHHHHHHHHHHHHHTTCCEEEEE------------
T ss_pred CCCCEEEEeCCCCHHHH------HHHHHHH---HcCCEEEEEEC-CHHHHHHHHHHHHhcCCcEEEEE------------
Confidence 45666899999999955 3444333 33333444332 22235678888888887766544
Q ss_pred CCccCcccCCHHHHHHHHHH-HHhcCCCCeEEEEeC-C--C--ccCCCChHHHHHHHH
Q 023717 164 GSKVPCRVDSPEDCARLIDV-NMKLKLGSGLVIGVP-I--P--REHAASGRVIESAIQ 215 (278)
Q Consensus 164 g~~~~~r~d~~~e~A~~~~~-~~~l~l~~g~lvanP-i--P--~e~~~~~~~i~~~i~ 215 (278)
.-+.+++++.++++. ..++|- ==+||-|- + + .=..++.++.++.++
T Consensus 63 -----~Dvt~~~~v~~~~~~~~~~~G~-iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~ 114 (254)
T 4fn4_A 63 -----ADVSKKKDVEEFVRRTFETYSR-IDVLCNNAGIMDGVTPVAEVSDELWERVLA 114 (254)
T ss_dssp -----CCTTSHHHHHHHHHHHHHHHSC-CCEEEECCCCCCTTCCGGGCCHHHHHHHHH
T ss_pred -----ccCCCHHHHHHHHHHHHHHcCC-CCEEEECCcccCCCCChhhCCHHHHHHHHH
Confidence 245678888887764 344542 23566653 1 1 224678888887765
No 191
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=25.71 E-value=1.7e+02 Score=24.00 Aligned_cols=103 Identities=17% Similarity=0.192 Sum_probs=54.7
Q ss_pred CCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecCCCCcceeecCCC
Q 023717 85 VGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSG 164 (278)
Q Consensus 85 aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy~~~Sg 164 (278)
.|=.|++|||-||+-+ .+..-|.+-+- .|++++--. =.+....+.++..|-.+..
T Consensus 8 ~~k~vlITGas~giG~------~~a~~l~~~G~-~V~~~~r~~---~~~~~~~~~~~~~~~~~~~--------------- 62 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQ------AYAEALAREGA-AVVVADINA---EAAEAVAKQIVADGGTAIS--------------- 62 (253)
T ss_dssp TTCEEEEETTTSHHHH------HHHHHHHHTTC-EEEEEESCH---HHHHHHHHHHHHTTCEEEE---------------
T ss_pred CCCEEEEECCCChHHH------HHHHHHHHCCC-EEEEEcCCH---HHHHHHHHHHHhcCCcEEE---------------
Confidence 4557999999999944 45555555442 244433221 1234445555555543322
Q ss_pred CccCcccCCHHHHHHHHHHH-HhcCCCCeEEEEeC-C----C--ccCCCChHHHHHHHH
Q 023717 165 SKVPCRVDSPEDCARLIDVN-MKLKLGSGLVIGVP-I----P--REHAASGRVIESAIQ 215 (278)
Q Consensus 165 ~~~~~r~d~~~e~A~~~~~~-~~l~l~~g~lvanP-i----P--~e~~~~~~~i~~~i~ 215 (278)
++..+.+++++.+++..- ..++ +--+||.|. + + .-..++.+.+++.++
T Consensus 63 --~~~D~~~~~~~~~~~~~~~~~~g-~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~ 118 (253)
T 3qiv_A 63 --VAVDVSDPESAKAMADRTLAEFG-GIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMS 118 (253)
T ss_dssp --EECCTTSHHHHHHHHHHHHHHHS-CCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHH
T ss_pred --EEccCCCHHHHHHHHHHHHHHcC-CCCEEEECCCcCCCCCCcccccCCHHHHHHHHh
Confidence 234556777777777643 3333 233566664 2 1 113467777666543
No 192
>3iz6_A 40S ribosomal protein SA (S2P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=25.62 E-value=38 Score=31.72 Aligned_cols=75 Identities=17% Similarity=0.222 Sum_probs=47.0
Q ss_pred cccchhhhHhHhhh-----------CCeeEEeecCC----------CCcceeecCCCCccCcccCCHHHHHHHHHHHHhc
Q 023717 129 SILDIPRTLEYLET-----------HGVCVAAYKTN----------EFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKL 187 (278)
Q Consensus 129 sILDi~~TLE~LET-----------~GV~V~gy~t~----------~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~~~l 187 (278)
.|+|+.+|+|+|.. ..|.+||-+.. .+=+||. .+.-+|+.+.+..+ ..+
T Consensus 51 hIIdL~kT~e~L~~Aa~~I~~i~~~~~ILfVgTk~~aq~aV~k~A~~tG~~yV--~~RWlgGtLTN~~t--------~~f 120 (305)
T 3iz6_A 51 YIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAI--AGRHTPGTFTNQLQ--------TSF 120 (305)
T ss_dssp EECCHHHHHHHHHHHHHHHHHTTSSCCEEEECCSHHHHHHHHHHHHHHTCEEE--CSCCCTTTTTTTTT--------SCS
T ss_pred eEECHHHHHHHHHHHHHHHHHHhCCCeEEEEeCcHHHHHHHHHHHHHhCCccc--cCcccCCcccCccc--------ccc
Confidence 59999999999852 34666665421 1223443 23345555544332 135
Q ss_pred CCCCeEEEEeCCCccCCCChHHHHHHHHHHHHHHHHcCC
Q 023717 188 KLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNI 226 (278)
Q Consensus 188 ~l~~g~lvanPiP~e~~~~~~~i~~~i~~Al~ea~~~gi 226 (278)
.+|.-++|.+|--+ .+|++||...||
T Consensus 121 ~ePdllvV~Dp~~d-------------~qAI~EA~~lnI 146 (305)
T 3iz6_A 121 SEPRLLILTDPRTD-------------HQPIKESALGNI 146 (305)
T ss_dssp SCCSEEEESCTTTT-------------HHHHHHHHHHTC
T ss_pred cCCceeEEeCcccc-------------hHHHHHHHHcCC
Confidence 78899999988322 478889998887
No 193
>2qk4_A Trifunctional purine biosynthetic protein adenosi; purine synthesis, enzyme, protein-ATP complex, structural GE structural genomics consortium, SGC; HET: ATP; 2.45A {Homo sapiens}
Probab=25.61 E-value=77 Score=29.20 Aligned_cols=14 Identities=21% Similarity=0.237 Sum_probs=7.0
Q ss_pred hHhHhhhCCeeEEe
Q 023717 136 TLEYLETHGVCVAA 149 (278)
Q Consensus 136 TLE~LET~GV~V~g 149 (278)
.++.||..|+|++|
T Consensus 104 ~~~~l~~~gi~~~g 117 (452)
T 2qk4_A 104 IVGNLRSAGVQCFG 117 (452)
T ss_dssp HHHHHHHTTCCEES
T ss_pred HHHHHHhcCCcEeC
Confidence 34455555555544
No 194
>1pv8_A Delta-aminolevulinic acid dehydratase; porphobilinogen synthase, tetrapyrrole biosynthesis, reactio intermediate, lyase; HET: PB1; 2.20A {Homo sapiens} SCOP: c.1.10.3 PDB: 1e51_A* 2z0i_A 2z1b_A
Probab=25.55 E-value=62 Score=30.61 Aligned_cols=67 Identities=24% Similarity=0.314 Sum_probs=44.4
Q ss_pred CCcceeecCCCCccCc-------ccCCHHHHHHHHHHHHhcCCCCeEEEEeCCCc-c-----CCCChHHHHHHHHHHHHH
Q 023717 154 EFPAFFTETSGSKVPC-------RVDSPEDCARLIDVNMKLKLGSGLVIGVPIPR-E-----HAASGRVIESAIQSALRE 220 (278)
Q Consensus 154 ~fPaFy~~~Sg~~~~~-------r~d~~~e~A~~~~~~~~l~l~~g~lvanPiP~-e-----~~~~~~~i~~~i~~Al~e 220 (278)
-+|-|...+.+.+-|- |+ +.+.+.+.+..-+++|+++=+||.+|-.. . .+.++ +.++.+|++.
T Consensus 32 I~PlFV~eg~~~~~~I~SMPGv~r~-sid~l~~~~~~~~~~Gi~~v~LFgvp~~~~Kd~~gs~A~~~---~g~v~~air~ 107 (330)
T 1pv8_A 32 IYPIFVTDVPDDIQPITSLPGVARY-GVKRLEEMLRPLVEEGLRCVLIFGVPSRVPKDERGSAADSE---ESPAIEAIHL 107 (330)
T ss_dssp EEEEEECSCTTCEEECSSSTTCEEE-CHHHHHHHHHHHHHHTCCEEEEEECC--------------C---CSHHHHHHHH
T ss_pred eeeEEEecCCCCccccCCCCCceee-cHHHHHHHHHHHHHCCCCEEEEecCCcccCCCccccccCCC---CChHHHHHHH
Confidence 3688888777654432 22 56788888889999999999999885431 1 23333 5678888888
Q ss_pred HHHc
Q 023717 221 AREK 224 (278)
Q Consensus 221 a~~~ 224 (278)
-++.
T Consensus 108 iK~~ 111 (330)
T 1pv8_A 108 LRKT 111 (330)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7765
No 195
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=25.51 E-value=2.2e+02 Score=24.02 Aligned_cols=108 Identities=18% Similarity=0.152 Sum_probs=55.9
Q ss_pred HHCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecc----------cccccchhhhHhHhhhCCeeEEeecC
Q 023717 83 SMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAG----------IKSILDIPRTLEYLETHGVCVAAYKT 152 (278)
Q Consensus 83 ~~aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG----------~KsILDi~~TLE~LET~GV~V~gy~t 152 (278)
.+.|=.+++|||-||+-+ -+..-|.+-+- .|++++-- ..+-=++..+.+.++..|..+..+.
T Consensus 12 ~l~gk~~lVTGas~gIG~------a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 83 (280)
T 3pgx_A 12 SLQGRVAFITGAARGQGR------SHAVRLAAEGA-DIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRV- 83 (280)
T ss_dssp TTTTCEEEEESTTSHHHH------HHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEE-
T ss_pred ccCCCEEEEECCCcHHHH------HHHHHHHHCCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEE-
Confidence 456777999999999844 34444443332 23332210 0122244555666666665544322
Q ss_pred CCCcceeecCCCCccCcccCCHHHHHHHHHH-HHhcCCCCeEEEEeCC-C---ccCCCChHHHHHHHH
Q 023717 153 NEFPAFFTETSGSKVPCRVDSPEDCARLIDV-NMKLKLGSGLVIGVPI-P---REHAASGRVIESAIQ 215 (278)
Q Consensus 153 ~~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~-~~~l~l~~g~lvanPi-P---~e~~~~~~~i~~~i~ 215 (278)
.-+.+++++.+++.. ..++|- --+||-|.= . .-..++.+.+++.++
T Consensus 84 ----------------~Dv~~~~~v~~~~~~~~~~~g~-id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 134 (280)
T 3pgx_A 84 ----------------LDVRDDAALRELVADGMEQFGR-LDVVVANAGVLSWGRVWELTDEQWDTVIG 134 (280)
T ss_dssp ----------------CCTTCHHHHHHHHHHHHHHHCC-CCEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred ----------------cCCCCHHHHHHHHHHHHHHcCC-CCEEEECCCCCCCCCcccCCHHHHHHHHh
Confidence 345577777777664 333442 234555521 1 122457777766443
No 196
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=25.46 E-value=2.6e+02 Score=24.02 Aligned_cols=105 Identities=17% Similarity=0.210 Sum_probs=56.1
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccc-----------cccchhhhHhHhhhCCeeEEeecC
Q 023717 84 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIK-----------SILDIPRTLEYLETHGVCVAAYKT 152 (278)
Q Consensus 84 ~aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~K-----------sILDi~~TLE~LET~GV~V~gy~t 152 (278)
+.|=.+++|||-||+-+ -+..-|.+- -.-||..+.. +-=++..+.+.++..|..+..+.
T Consensus 26 l~gk~~lVTGas~GIG~------aia~~la~~---G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 95 (299)
T 3t7c_A 26 VEGKVAFITGAARGQGR------SHAITLARE---GADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQ- 95 (299)
T ss_dssp TTTCEEEEESTTSHHHH------HHHHHHHHT---TCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEE-
T ss_pred cCCCEEEEECCCCHHHH------HHHHHHHHC---CCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEE-
Confidence 45667999999999844 334333333 2233332211 12234566777777776554333
Q ss_pred CCCcceeecCCCCccCcccCCHHHHHHHHHH-HHhcCCCCeEEEEeCC-----CccCCCChHHHHHHHH
Q 023717 153 NEFPAFFTETSGSKVPCRVDSPEDCARLIDV-NMKLKLGSGLVIGVPI-----PREHAASGRVIESAIQ 215 (278)
Q Consensus 153 ~~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~-~~~l~l~~g~lvanPi-----P~e~~~~~~~i~~~i~ 215 (278)
.-+.+++++.+++.. ...+|- --+||.|.= +.-..++.+++++.++
T Consensus 96 ----------------~Dv~~~~~v~~~~~~~~~~~g~-iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 147 (299)
T 3t7c_A 96 ----------------VDVRDFDAMQAAVDDGVTQLGR-LDIVLANAALASEGTRLNRMDPKTWRDMID 147 (299)
T ss_dssp ----------------CCTTCHHHHHHHHHHHHHHHSC-CCEEEECCCCCCCCCCTTTCCHHHHHHHHH
T ss_pred ----------------CCCCCHHHHHHHHHHHHHHhCC-CCEEEECCCCCCCCCchhhCCHHHHHHHHH
Confidence 344567777777663 333442 234565521 1123467777776654
No 197
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=25.44 E-value=1.8e+02 Score=24.29 Aligned_cols=104 Identities=17% Similarity=0.210 Sum_probs=53.9
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecCCCCcceeecCC
Q 023717 84 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETS 163 (278)
Q Consensus 84 ~aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy~~~S 163 (278)
+.|=.+++|||-||+-+ -+..-|.+-+- .|++++--.. .+..+.+.|+..|..+..
T Consensus 4 l~~k~vlVTGas~gIG~------aia~~l~~~G~-~V~~~~r~~~---~~~~~~~~~~~~~~~~~~-------------- 59 (257)
T 3imf_A 4 MKEKVVIITGGSSGMGK------GMATRFAKEGA-RVVITGRTKE---KLEEAKLEIEQFPGQILT-------------- 59 (257)
T ss_dssp TTTCEEEETTTTSHHHH------HHHHHHHHTTC-EEEEEESCHH---HHHHHHHHHCCSTTCEEE--------------
T ss_pred CCCCEEEEECCCCHHHH------HHHHHHHHCCC-EEEEEeCCHH---HHHHHHHHHHhcCCcEEE--------------
Confidence 34556899999999844 34544444432 2444332211 233444555544433322
Q ss_pred CCccCcccCCHHHHHHHHHHH-HhcCCCCeEEEEeCC----CccCCCChHHHHHHHH
Q 023717 164 GSKVPCRVDSPEDCARLIDVN-MKLKLGSGLVIGVPI----PREHAASGRVIESAIQ 215 (278)
Q Consensus 164 g~~~~~r~d~~~e~A~~~~~~-~~l~l~~g~lvanPi----P~e~~~~~~~i~~~i~ 215 (278)
++.-+.+++++.+++..- ..+| +--+||.|.= ..-..++.+.+++.++
T Consensus 60 ---~~~Dv~~~~~v~~~~~~~~~~~g-~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 112 (257)
T 3imf_A 60 ---VQMDVRNTDDIQKMIEQIDEKFG-RIDILINNAAGNFICPAEDLSVNGWNSVIN 112 (257)
T ss_dssp ---EECCTTCHHHHHHHHHHHHHHHS-CCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred ---EEccCCCHHHHHHHHHHHHHHcC-CCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 223466778887777643 3343 2234665532 1123567777766654
No 198
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=25.33 E-value=2.4e+02 Score=23.65 Aligned_cols=103 Identities=18% Similarity=0.123 Sum_probs=52.1
Q ss_pred CCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecCCCCcceeecCCCC
Q 023717 86 GIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGS 165 (278)
Q Consensus 86 GI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy~~~Sg~ 165 (278)
+=.|++|||-||+-+ -+..-|.+-+- .|++++.- +--......+.++..|..+..+.
T Consensus 26 ~k~vlITGas~gIG~------a~a~~l~~~G~-~V~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-------------- 82 (272)
T 4e3z_A 26 TPVVLVTGGSRGIGA------AVCRLAARQGW-RVGVNYAA--NREAADAVVAAITESGGEAVAIP-------------- 82 (272)
T ss_dssp SCEEEETTTTSHHHH------HHHHHHHHTTC-EEEEEESS--CHHHHHHHHHHHHHTTCEEEEEE--------------
T ss_pred CCEEEEECCCchHHH------HHHHHHHHCCC-EEEEEcCC--ChhHHHHHHHHHHhcCCcEEEEE--------------
Confidence 345899999999944 33333333321 23333222 22234455566666665544322
Q ss_pred ccCcccCCHHHHHHHHHHH-HhcCCCCeEEEEeCC-----CccCCCChHHHHHHHH
Q 023717 166 KVPCRVDSPEDCARLIDVN-MKLKLGSGLVIGVPI-----PREHAASGRVIESAIQ 215 (278)
Q Consensus 166 ~~~~r~d~~~e~A~~~~~~-~~l~l~~g~lvanPi-----P~e~~~~~~~i~~~i~ 215 (278)
.-+.+++++.+++..- ..+|-- -+||.|.= ..-..++.+.+++.++
T Consensus 83 ---~Dl~~~~~v~~~~~~~~~~~g~i-d~li~nAg~~~~~~~~~~~~~~~~~~~~~ 134 (272)
T 4e3z_A 83 ---GDVGNAADIAAMFSAVDRQFGRL-DGLVNNAGIVDYPQRVDEMSVERIERMLR 134 (272)
T ss_dssp ---CCTTCHHHHHHHHHHHHHHHSCC-CEEEECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred ---cCCCCHHHHHHHHHHHHHhCCCC-CEEEECCCCCCCCCChhhCCHHHHHHHHh
Confidence 2455777777777643 333322 24555531 1123456666666554
No 199
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=25.24 E-value=3.8e+02 Score=24.20 Aligned_cols=160 Identities=13% Similarity=0.116 Sum_probs=83.1
Q ss_pred HHHHHHHHCCCcEEEecc--cccccCCCccccccccch--------hhhcCCCeEEEe-cccccccchhhhHhHhhhCCe
Q 023717 77 ATMFFASMVGIPVFVTGG--IGGVHRHGEHTMDISSDL--------TELGRTPVAVVS-AGIKSILDIPRTLEYLETHGV 145 (278)
Q Consensus 77 aTm~lA~~aGI~VFaTGG--IGGVHrg~~~t~DiSaDL--------~eL~rtpV~VVc-aG~KsILDi~~TLE~LET~GV 145 (278)
.+..++..+|++...+|| ++-+ .|...+-.++-|- ..-.+.||++=. .|--+..++-+|...|+..|+
T Consensus 30 ~sA~~~~~aG~~ai~vsg~~~a~~-lG~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg~~~~v~~~v~~l~~aGa 108 (295)
T 1s2w_A 30 LSARIVQEAGFKGIWGSGLSVSAQ-LGVRDSNEASWTQVVEVLEFMSDASDVPILLDADTGYGNFNNARRLVRKLEDRGV 108 (295)
T ss_dssp HHHHHHHHHTCSCEEECCHHHHHT-C---------CHHHHHHHHHHHHTCSSCEEEECCSSCSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCEEEeChHHHHHh-CCCCCCCCCCHHHHHHHHHHHHhcCCCCEEecCCCCCCCHHHHHHHHHHHHHcCC
Confidence 456778889999999995 6643 5655544444321 112345632211 443466889999999999998
Q ss_pred eEEeecCCCCcceeecCCCCc-cCcccCCHHHHHHHHHHHHhcCCCCe-EEEEeCCCccCCCChHHHHHHHHHHHHHHHH
Q 023717 146 CVAAYKTNEFPAFFTETSGSK-VPCRVDSPEDCARLIDVNMKLKLGSG-LVIGVPIPREHAASGRVIESAIQSALREARE 223 (278)
Q Consensus 146 ~V~gy~t~~fPaFy~~~Sg~~-~~~r~d~~~e~A~~~~~~~~l~l~~g-~lvanPiP~e~~~~~~~i~~~i~~Al~ea~~ 223 (278)
--+-.....+|- +.+.+. ....+-+.+|.++-|++-.+-...++ +|++.= .. .+-..-++++|++|.+.++
T Consensus 109 agv~iED~~~~k---~cgH~gg~~k~l~p~~e~~~rI~Aa~~a~~~~~~~i~aRt-da--~~a~~g~~~ai~Ra~ay~e- 181 (295)
T 1s2w_A 109 AGACLEDKLFPK---TNSLHDGRAQPLADIEEFALKIKACKDSQTDPDFCIVARV-EA--FIAGWGLDEALKRAEAYRN- 181 (295)
T ss_dssp CEEEEECBCC-----------CTTCCBCCHHHHHHHHHHHHHHCSSTTCEEEEEE-CT--TTTTCCHHHHHHHHHHHHH-
T ss_pred cEEEECCCCCCc---cccccCCCCCcccCHHHHHHHHHHHHHhcccCCcEEEEee-hH--HhccccHHHHHHHHHHHHH-
Confidence 777665444431 111111 11346667776666665554443344 455542 11 1122236888888877665
Q ss_pred cCCC-----CccCChHHHHHHHHHhC
Q 023717 224 KNIT-----GNAETPFLLARVNELTG 244 (278)
Q Consensus 224 ~gi~-----Gk~vTPflL~~i~elT~ 244 (278)
.|.. +.--++-..++|.+...
T Consensus 182 AGAd~i~~e~~~~~~~~~~~i~~~~~ 207 (295)
T 1s2w_A 182 AGADAILMHSKKADPSDIEAFMKAWN 207 (295)
T ss_dssp TTCSEEEECCCSSSSHHHHHHHHHHT
T ss_pred cCCCEEEEcCCCCCHHHHHHHHHHcC
Confidence 3432 22223566666666554
No 200
>3mio_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin, ribulose-5-phosphate, FAD, FMN; 1.80A {Mycobacterium tuberculosis} SCOP: d.115.1.0 PDB: 3mgz_A 3mk5_A
Probab=25.19 E-value=44 Score=29.50 Aligned_cols=55 Identities=24% Similarity=0.384 Sum_probs=42.7
Q ss_pred cccccCCCccccccccchhhhcCC-CeEEEecc--cc---cccchhhhHhHhhhCCeeEEee
Q 023717 95 IGGVHRHGEHTMDISSDLTELGRT-PVAVVSAG--IK---SILDIPRTLEYLETHGVCVAAY 150 (278)
Q Consensus 95 IGGVHrg~~~t~DiSaDL~eL~rt-pV~VVcaG--~K---sILDi~~TLE~LET~GV~V~gy 150 (278)
=|||.+-.-.| .-|-||..|+.- |+.|+|-= .+ ++...+.-.+|=+.+|.|+++.
T Consensus 135 ~gGvl~R~GhT-EaavdLarlAGl~Pa~vicEiv~~~~dG~mar~~~l~~fA~~h~l~~iti 195 (206)
T 3mio_A 135 DGGVLRRPGHT-EAAVDLARMAGLQPAGAICEIVSQKDEGSMAHTDELRVFADEHGLALITI 195 (206)
T ss_dssp TTGGGTCCCHH-HHHHHHHHHTTSCSBEEEEEBBCSSSTTSBCCHHHHHHHHHHHTCEEEEH
T ss_pred CCCcccCCChH-HHHHHHHHHcCCCceEEEEEEeeeCCCCCcCCHHHHHHHHHHcCCcEEEH
Confidence 37774322223 478899999875 89999976 44 5999999999999999999874
No 201
>2ab1_A Hypothetical protein; HS.95870, DUF498, structural genomics, protein structure INI PSI, center for eukaryotic structural genomics, CESG; 2.59A {Homo sapiens} SCOP: c.103.1.1 PDB: 2q4q_A
Probab=24.98 E-value=47 Score=26.47 Aligned_cols=40 Identities=30% Similarity=0.482 Sum_probs=30.7
Q ss_pred chhhhcC--CCeEEEeccccccc-chhhhHhHhhhCCeeEEee
Q 023717 111 DLTELGR--TPVAVVSAGIKSIL-DIPRTLEYLETHGVCVAAY 150 (278)
Q Consensus 111 DL~eL~r--tpV~VVcaG~KsIL-Di~~TLE~LET~GV~V~gy 150 (278)
||.+|-. ..|+||.+|.+.-+ =-|.+.++|+.+|+.|---
T Consensus 53 ~l~~ll~~~~evliiGtG~~~~~~~~~~~~~~l~~~gI~ve~m 95 (122)
T 2ab1_A 53 DVKEVVEKGVQTLVIGRGMSEALKVPSSTVEYLKKHGIDVRVL 95 (122)
T ss_dssp HHHHHHTTCCSEEEEEECSSCCSCCCHHHHHHHHHTTCEEEEE
T ss_pred HHHHHhhCCCCEEEECCCCCCccCCCHHHHHHHHHcCCEEEEe
Confidence 5555422 44999999999987 5588889999999887643
No 202
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=24.95 E-value=1.1e+02 Score=25.67 Aligned_cols=86 Identities=12% Similarity=0.038 Sum_probs=50.1
Q ss_pred chhhhHhHhhhCCeeEEeecCCCCcceeecCCCCccC-cccCCHHHHHHHHHHHHhcCCCCeEEEEeCCCccCCCCh---
Q 023717 132 DIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVP-CRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASG--- 207 (278)
Q Consensus 132 Di~~TLE~LET~GV~V~gy~t~~fPaFy~~~Sg~~~~-~r~d~~~e~A~~~~~~~~l~l~~g~lvanPiP~e~~~~~--- 207 (278)
++....+.|+..|+.|.++.+. +. ...| .+-...+..-+.++....||.+.=++..-..|.. ..+.
T Consensus 49 ~~~~~~~~l~~~gl~~~~~~~~-----~~----~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~~g~~~~~-~~~~~~~ 118 (286)
T 3dx5_A 49 TTERELNCLKDKTLEITMISDY-----LD----ISLSADFEKTIEKCEQLAILANWFKTNKIRTFAGQKGSA-DFSQQER 118 (286)
T ss_dssp HHHHHHHHTGGGTCCEEEEECC-----CC----CSTTSCHHHHHHHHHHHHHHHHHHTCCEEEECSCSSCGG-GSCHHHH
T ss_pred HHHHHHHHHHHcCCeEEEEecC-----CC----CCCchhHHHHHHHHHHHHHHHHHhCCCEEEEcCCCCCcc-cCcHHHH
Confidence 5566778999999999987531 10 0111 1222345566777777888754332222222322 2222
Q ss_pred HHHHHHHHHHHHHHHHcCCC
Q 023717 208 RVIESAIQSALREAREKNIT 227 (278)
Q Consensus 208 ~~i~~~i~~Al~ea~~~gi~ 227 (278)
+.+-+.+++....|++.||+
T Consensus 119 ~~~~~~l~~l~~~a~~~Gv~ 138 (286)
T 3dx5_A 119 QEYVNRIRMICELFAQHNMY 138 (286)
T ss_dssp HHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHHHHHHhCCE
Confidence 44556677888889999985
No 203
>2yrx_A Phosphoribosylglycinamide synthetase; glycinamide ribonucleotide synthetase, GAR synthetase; HET: AMP; 1.90A {Geobacillus kaustophilus} PDB: 2yrw_A* 2ys6_A* 2ys7_A
Probab=24.92 E-value=78 Score=29.23 Aligned_cols=15 Identities=7% Similarity=0.215 Sum_probs=8.4
Q ss_pred hhHhHhhhCCeeEEe
Q 023717 135 RTLEYLETHGVCVAA 149 (278)
Q Consensus 135 ~TLE~LET~GV~V~g 149 (278)
...+.||..|+|++|
T Consensus 98 ~~~~~l~~~gi~~~g 112 (451)
T 2yrx_A 98 GIVDRFMAEGLRIFG 112 (451)
T ss_dssp THHHHHHHTTCCEES
T ss_pred HHHHHHHHCCCCEeC
Confidence 344555666666654
No 204
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=24.82 E-value=1.2e+02 Score=27.84 Aligned_cols=77 Identities=18% Similarity=0.192 Sum_probs=43.3
Q ss_pred hhhHhHhhhCCeeEEeecC-------CC--CcceeecCCCCccCc----ccCCHHHHHHHHHHHHhcCC-----------
Q 023717 134 PRTLEYLETHGVCVAAYKT-------NE--FPAFFTETSGSKVPC----RVDSPEDCARLIDVNMKLKL----------- 189 (278)
Q Consensus 134 ~~TLE~LET~GV~V~gy~t-------~~--fPaFy~~~Sg~~~~~----r~d~~~e~A~~~~~~~~l~l----------- 189 (278)
....+.||..|++++|-.. |. +-. +..+.|+++|- .+++++++.+.... +|.
T Consensus 93 ~~~~~~~~~~g~~~~g~~~~~~~~~~dK~~~~~-~l~~~Gip~p~~~~~~~~~~~e~~~~~~~---~g~PvvvKp~~g~g 168 (446)
T 3ouz_A 93 QNFVEICAKHNIKFIGPSVEAMNLMSDKSKAKQ-VMQRAGVPVIPGSDGALAGAEAAKKLAKE---IGYPVILKAAAGGG 168 (446)
T ss_dssp HHHHHHHHHTTCEESSCCHHHHHHHHSHHHHHH-HHHHTTCCBCSBCSSSCCSHHHHHHHHHH---HCSSEEEEETTCCT
T ss_pred HHHHHHHHHCCCceECcCHHHHHHhCCHHHHHH-HHHHcCCCcCCCcccCCCCHHHHHHHHHH---hCCCEEEEECCCCC
Confidence 4556777777777765321 11 111 23455777653 46788887665443 333
Q ss_pred CCeEEEEeCCCccCCCChHHHHHHHHHHHHHHH
Q 023717 190 GSGLVIGVPIPREHAASGRVIESAIQSALREAR 222 (278)
Q Consensus 190 ~~g~lvanPiP~e~~~~~~~i~~~i~~Al~ea~ 222 (278)
..|+.++. +.++++++++++..++.
T Consensus 169 g~Gv~~v~--------~~~el~~~~~~~~~~~~ 193 (446)
T 3ouz_A 169 GRGMRVVE--------NEKDLEKAYWSAESEAM 193 (446)
T ss_dssp TCSEEEEC--------SGGGHHHHHHHHHHHHH
T ss_pred CCCEEEEC--------CHHHHHHHHHHHHHHHH
Confidence 22333322 45677888888877765
No 205
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=24.69 E-value=40 Score=28.60 Aligned_cols=35 Identities=14% Similarity=0.147 Sum_probs=28.2
Q ss_pred eEEEecccccccchhhhHhHhhhCCeeEEeecCCC
Q 023717 120 VAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNE 154 (278)
Q Consensus 120 V~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~ 154 (278)
++|+..+.-|+-++.+++++++..|++++|+=-+.
T Consensus 157 iiv~~~~~~s~~~~~~~~~~l~~~~~~~~gvV~N~ 191 (262)
T 2ph1_A 157 VVVSTPQELTAVIVEKAINMAEETNTSVLGLVENM 191 (262)
T ss_dssp EEEECSSSCCHHHHHHHHHHHHTTTCCEEEEEETT
T ss_pred EEEecCccchHHHHHHHHHHHHhCCCCEEEEEECC
Confidence 45566777788899999999999999999875333
No 206
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=24.65 E-value=1.3e+02 Score=27.53 Aligned_cols=26 Identities=12% Similarity=0.212 Sum_probs=15.0
Q ss_pred EecccccccchhhhHhHhhhCCeeEEeecC
Q 023717 123 VSAGIKSILDIPRTLEYLETHGVCVAAYKT 152 (278)
Q Consensus 123 VcaG~KsILDi~~TLE~LET~GV~V~gy~t 152 (278)
.+-|..+-.|+-+-|. .|.--++.++
T Consensus 282 a~GGI~~~~dv~kala----lGA~~V~iG~ 307 (393)
T 2qr6_A 282 ADGSIENSGDVVKAIA----CGADAVVLGS 307 (393)
T ss_dssp ECSSCCSHHHHHHHHH----HTCSEEEECG
T ss_pred EECCCCCHHHHHHHHH----cCCCEEEECH
Confidence 3455666667666554 3666665553
No 207
>3ogz_A UDP-sugar pyrophosphorylase; LEFT handed beta helix, rossmann fold, UDP sugar pyrophospho transferase; 2.03A {Leishmania major} PDB: 3oh3_A* 3oh1_A* 3oh0_A* 3oh2_A* 3oh4_A*
Probab=24.56 E-value=56 Score=33.33 Aligned_cols=28 Identities=21% Similarity=0.260 Sum_probs=22.7
Q ss_pred hhhHhHhhhCCe---eEEeecCCCCcceeec
Q 023717 134 PRTLEYLETHGV---CVAAYKTNEFPAFFTE 161 (278)
Q Consensus 134 ~~TLE~LET~GV---~V~gy~t~~fPaFy~~ 161 (278)
..|++||+.+|. .|.-|....+|.|...
T Consensus 175 ~~T~~~~~~fgl~~~~V~~F~Q~~~P~i~~~ 205 (630)
T 3ogz_A 175 DRTLQLLRELQLEVPNLHVLKQGQVFCFADS 205 (630)
T ss_dssp HHHHHHHHHTTCCCTTEEEEECCCEECBSST
T ss_pred HHHHHHHHHhCCCcccEEEEEcCCEEEEecC
Confidence 578999999886 4788889999998733
No 208
>2fvt_A Conserved hypothetical protein; MTH938-like fold, structural genomics, PSI, protein structure initiative; NMR {Rhodopseudomonas palustris} SCOP: c.103.1.1
Probab=24.54 E-value=87 Score=25.41 Aligned_cols=32 Identities=16% Similarity=0.149 Sum_probs=26.5
Q ss_pred CCeEEEecccccccchhhhHhHhhhCCeeEEe
Q 023717 118 TPVAVVSAGIKSILDIPRTLEYLETHGVCVAA 149 (278)
Q Consensus 118 tpV~VVcaG~KsILDi~~TLE~LET~GV~V~g 149 (278)
..|+||.+|.+--+=-|.+.++|+.+|+-|--
T Consensus 68 pevliiGTG~~~~~l~p~l~~~l~~~GI~vE~ 99 (135)
T 2fvt_A 68 IDTLIVGTGADVWIAPRQLREALRGVNVVLDT 99 (135)
T ss_dssp CSEEEEECTTSCCCCCHHHHHHHHTTTCEEEE
T ss_pred CCEEEEcCCCCCCcCCHHHHHHHHHcCCEEEE
Confidence 44999999998877668888999999987753
No 209
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=24.25 E-value=2.1e+02 Score=25.44 Aligned_cols=25 Identities=28% Similarity=0.360 Sum_probs=11.6
Q ss_pred chhhHHHHHHHHHHCC--CcEEEeccc
Q 023717 71 GATTVSATMFFASMVG--IPVFVTGGI 95 (278)
Q Consensus 71 GaTTVaaTm~lA~~aG--I~VFaTGGI 95 (278)
||+|+...-.+.+..| ++|-+.|||
T Consensus 183 ggAt~~dv~lmr~~vg~~v~VKasGGI 209 (239)
T 3ngj_A 183 HGATPEDVKLMKDTVGDKALVKAAGGI 209 (239)
T ss_dssp CCCCHHHHHHHHHHHGGGSEEEEESSC
T ss_pred CCCCHHHHHHHHHhhCCCceEEEeCCC
Confidence 5555554444433332 445555543
No 210
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=24.23 E-value=2.8e+02 Score=22.72 Aligned_cols=17 Identities=29% Similarity=0.520 Sum_probs=13.6
Q ss_pred HCCCcEEEecccccccC
Q 023717 84 MVGIPVFVTGGIGGVHR 100 (278)
Q Consensus 84 ~aGI~VFaTGGIGGVHr 100 (278)
+.|=.|++|||-||+-+
T Consensus 5 l~~k~vlITGasggiG~ 21 (261)
T 1gee_A 5 LEGKVVVITGSSTGLGK 21 (261)
T ss_dssp GTTCEEEETTCSSHHHH
T ss_pred CCCCEEEEeCCCChHHH
Confidence 45667999999999944
No 211
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=24.11 E-value=1.4e+02 Score=29.16 Aligned_cols=135 Identities=19% Similarity=0.174 Sum_probs=79.1
Q ss_pred HHHHHHHHHHCCCcccEEEEEcCcee--ecCCHHHHHHHHhcCCCcccccccc-hHHHHhcCCCchhhHHHHHHHHHHCC
Q 023717 10 AKEVEAIVRNNGAVPATIAILEGLPC--VGLSTEELERLAKLGSKAQKTARRD-IAHVVATRGNGATTVSATMFFASMVG 86 (278)
Q Consensus 10 A~~~E~~vR~~GavPATIaii~G~i~--VGl~~~el~~la~~~~~~~K~srRD-l~~~~a~~~~GaTTVaaTm~lA~~aG 86 (278)
+..+-+.+.+.||-.-++.-.+|-|. =|++.++|.+|.+. |-+++. +..... ..|++.+...-++ -..
T Consensus 247 G~~aa~~L~e~GakvVavsD~~G~i~d~~Gid~e~l~~l~e~-----k~~~~g~v~~~~~--~~g~~~~~~~~i~--~~~ 317 (450)
T 4fcc_A 247 AQYAIEKAMEFGARVITASDSSGTVVDESGFTKEKLARLIEI-----KSSRDGRVADYAK--EFGLVYLEGQQPW--SVP 317 (450)
T ss_dssp HHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHH-----HTSTTCCHHHHHH--HHTCEEEETCCGG--GSC
T ss_pred HHHHHHHHHhcCCeEEEEecCCceEEeCCCCCHHHHHHHHHH-----hcccCCccccccc--cCCcEEecCcccc--cCC
Confidence 34444556678887444433344442 38999999888653 222222 111111 1133333222121 257
Q ss_pred CcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecCCCCcceeecCCCCc
Q 023717 87 IPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSK 166 (278)
Q Consensus 87 I~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy~~~Sg~~ 166 (278)
.+||+-|.+|++=-. .+...|-..-+.+|+-|+.-=+ -+..-+.|+..||.++ |.|....-|+-
T Consensus 318 ~DI~iPcAl~~~I~~--------~~a~~L~a~g~k~IaEgAN~p~-t~eA~~iL~~rGIl~~-------PD~~aNAGGVi 381 (450)
T 4fcc_A 318 VDIALPCATQNELDV--------DAAHQLIANGVKAVAEGANMPT-TIEATELFQQAGVLFA-------PGKAANAGGVA 381 (450)
T ss_dssp CSEEEECSCTTCBCH--------HHHHHHHHTTCCEEECCSSSCB-CHHHHHHHHHTTCEEE-------CHHHHTTHHHH
T ss_pred ccEEeeccccccccH--------HHHHHHHhcCceEEecCCCCCC-CHHHHHHHHHCCCEEE-------ChHHhcCccHh
Confidence 899999999975221 2233344444667788875444 3445689999999988 99999999887
Q ss_pred cCc
Q 023717 167 VPC 169 (278)
Q Consensus 167 ~~~ 169 (278)
+.|
T Consensus 382 ~S~ 384 (450)
T 4fcc_A 382 TSG 384 (450)
T ss_dssp HHH
T ss_pred hhH
Confidence 754
No 212
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=24.09 E-value=39 Score=31.03 Aligned_cols=40 Identities=20% Similarity=0.360 Sum_probs=22.8
Q ss_pred CCeeEEeecCCCCcceeecCCCCccCcccCCHHHHHHHHH
Q 023717 143 HGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLID 182 (278)
Q Consensus 143 ~GV~V~gy~t~~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~ 182 (278)
.|||++.+-+..||.+|-..+.-.--...++.++.++++.
T Consensus 282 ~GIP~~~~~~~~f~~~yHt~~Dt~d~id~~~l~~~~~i~~ 321 (330)
T 3pb6_X 282 RGVPVLHLISTPFPAVWHTPADTEVNLHPPTVHNLCRILA 321 (330)
T ss_dssp TTCCEEEEECSSCCTTTTSTTCSGGGSCHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCCCCCCcCchhhCCHHHHHHHHHHHH
Confidence 6788888876667766644333222223445566666655
No 213
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=24.03 E-value=26 Score=31.60 Aligned_cols=99 Identities=11% Similarity=0.160 Sum_probs=49.9
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCee-EEeecCCCCcceeecC
Q 023717 84 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVC-VAAYKTNEFPAFFTET 162 (278)
Q Consensus 84 ~aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~-V~gy~t~~fPaFy~~~ 162 (278)
..|=.|+++|+-|||-.- -.-|--+.-..|+++|+ +.-+|+++.+|.. |+-|...++......-
T Consensus 163 ~~g~~VlV~Ga~G~vG~~-------a~qla~~~Ga~Vi~~~~--------~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~ 227 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATV-------TMQMLRLSGYIPIATCS--------PHNFDLAKSRGAEEVFDYRAPNLAQTIRTY 227 (371)
T ss_dssp SSCCEEEEESTTSHHHHH-------HHHHHHHTTCEEEEEEC--------GGGHHHHHHTTCSEEEETTSTTHHHHHHHH
T ss_pred CCCcEEEEECCCcHHHHH-------HHHHHHHCCCEEEEEeC--------HHHHHHHHHcCCcEEEECCCchHHHHHHHH
Confidence 345569999988888321 12222222234555542 3458899999985 6777766655443322
Q ss_pred CCCccCcccCCHHHHHHHHHHHHhcCCCCeEEEEe
Q 023717 163 SGSKVPCRVDSPEDCARLIDVNMKLKLGSGLVIGV 197 (278)
Q Consensus 163 Sg~~~~~r~d~~~e~A~~~~~~~~l~l~~g~lvan 197 (278)
.+-.++.-+|..-....+-.+-..|.-++|.++..
T Consensus 228 t~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~iv~~ 262 (371)
T 3gqv_A 228 TKNNLRYALDCITNVESTTFCFAAIGRAGGHYVSL 262 (371)
T ss_dssp TTTCCCEEEESSCSHHHHHHHHHHSCTTCEEEEES
T ss_pred ccCCccEEEECCCchHHHHHHHHHhhcCCCEEEEE
Confidence 21125555554322111112222332256666554
No 214
>3td9_A Branched chain amino acid ABC transporter, peripl amino acid-binding protein; leucine binding, structural genomics; HET: MSE PHE; 1.90A {Thermotoga maritima}
Probab=23.99 E-value=3.4e+02 Score=23.15 Aligned_cols=122 Identities=11% Similarity=0.043 Sum_probs=68.3
Q ss_pred hhHHHHHHHHHHCCCcEEEeccccc-ccCCCccccccccc-----------h-hhhcCCCeEEEec-ccccccc-hhhhH
Q 023717 73 TTVSATMFFASMVGIPVFVTGGIGG-VHRHGEHTMDISSD-----------L-TELGRTPVAVVSA-GIKSILD-IPRTL 137 (278)
Q Consensus 73 TTVaaTm~lA~~aGI~VFaTGGIGG-VHrg~~~t~DiSaD-----------L-~eL~rtpV~VVca-G~KsILD-i~~TL 137 (278)
.+..+.+-++...+|+++..+...- ...+....|-++.| | ..++-..|++|.. ..-.-.+ ...-.
T Consensus 92 ~~~~~~~~~~~~~~iP~i~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~~~~g~~~iaii~~~~~~~~~~~~~~~~ 171 (366)
T 3td9_A 92 AHSLAIAPIAEENKVPMVTPASTNPLVTQGRKFVSRVCFIDPFQGAAMAVFAYKNLGAKRVVVFTDVEQDYSVGLSNFFI 171 (366)
T ss_dssp HHHHHHHHHHHHTTCCEEESSCCCGGGTTTCSSEEESSCCHHHHHHHHHHHHHHTSCCCEEEEEEETTCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHhCCCeEEecCCCCccccCCCCCEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEEEeCCCcHHHHHHHHHH
Confidence 3344556788899999998764221 11112222333332 2 2257778888842 2211111 23445
Q ss_pred hHhhhCCeeEEeec----CCCCcceeec--CCCCccCcccCCHHHHHHHHHHHHhcCCCCeEE
Q 023717 138 EYLETHGVCVAAYK----TNEFPAFFTE--TSGSKVPCRVDSPEDCARLIDVNMKLKLGSGLV 194 (278)
Q Consensus 138 E~LET~GV~V~gy~----t~~fPaFy~~--~Sg~~~~~r~d~~~e~A~~~~~~~~l~l~~g~l 194 (278)
+.|+.+|++|+... +.+|.....+ .++..+=+-..+..+++.++++-+++|+...++
T Consensus 172 ~~~~~~G~~v~~~~~~~~~~d~~~~~~~l~~~~~d~v~~~~~~~~a~~~~~~~~~~g~~~~~~ 234 (366)
T 3td9_A 172 NKFTELGGQVKRVFFRSGDQDFSAQLSVAMSFNPDAIYITGYYPEIALISRQARQLGFTGYIL 234 (366)
T ss_dssp HHHHHTTCEEEEEEECTTCCCCHHHHHHHHHTCCSEEEECSCHHHHHHHHHHHHHTTCCSEEE
T ss_pred HHHHHCCCEEEEEEeCCCCccHHHHHHHHHhcCCCEEEEccchhHHHHHHHHHHHcCCCceEE
Confidence 78899999987642 2233332221 233333344467788899999999999876543
No 215
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=23.98 E-value=36 Score=26.49 Aligned_cols=28 Identities=18% Similarity=0.395 Sum_probs=22.6
Q ss_pred CChHHHHHHHHHHHHHHHHcCCCCccCChHH
Q 023717 205 ASGRVIESAIQSALREAREKNITGNAETPFL 235 (278)
Q Consensus 205 ~~~~~i~~~i~~Al~ea~~~gi~Gk~vTPfl 235 (278)
++...+++.|++..+.+++.||+| ||.+
T Consensus 127 ~~s~~~~~~v~~~~~~a~~~gv~g---TPtf 154 (184)
T 4dvc_A 127 YNGFAVDSMVHRFDKQFQDSGLTG---VPAV 154 (184)
T ss_dssp HTSHHHHHHHHHHHHHHHHHTCCS---SSEE
T ss_pred HhCHHHHHHHHHHHHHHHHcCCCc---CCEE
Confidence 455667788999999999999998 7744
No 216
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=23.96 E-value=2.2e+02 Score=24.40 Aligned_cols=24 Identities=25% Similarity=0.358 Sum_probs=15.0
Q ss_pred HHHHHHHHCCCcEEEecccccccC
Q 023717 77 ATMFFASMVGIPVFVTGGIGGVHR 100 (278)
Q Consensus 77 aTm~lA~~aGI~VFaTGGIGGVHr 100 (278)
.+|....+.|=.+++|||-||+-+
T Consensus 20 ~sm~~~~l~gk~vlVTGas~gIG~ 43 (277)
T 3gvc_A 20 GSMNHPDLAGKVAIVTGAGAGIGL 43 (277)
T ss_dssp -------CTTCEEEETTTTSTHHH
T ss_pred CCCCccCCCCCEEEEECCCcHHHH
Confidence 346666788888999999999954
No 217
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=23.55 E-value=1.8e+02 Score=25.61 Aligned_cols=16 Identities=13% Similarity=0.007 Sum_probs=7.4
Q ss_pred HHHHHHHHCCCcEEEe
Q 023717 77 ATMFFASMVGIPVFVT 92 (278)
Q Consensus 77 aTm~lA~~aGI~VFaT 92 (278)
-...+|..+|.++.=|
T Consensus 152 ~a~ria~eaGADfVKT 167 (234)
T 1n7k_A 152 LLVDSSRRAGADIVKT 167 (234)
T ss_dssp HHHHHHHHTTCSEEES
T ss_pred HHHHHHHHhCCCEEEe
Confidence 3344444455554444
No 218
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=23.54 E-value=4e+02 Score=25.63 Aligned_cols=14 Identities=36% Similarity=0.451 Sum_probs=7.1
Q ss_pred cccccccchhhhHh
Q 023717 125 AGIKSILDIPRTLE 138 (278)
Q Consensus 125 aG~KsILDi~~TLE 138 (278)
-|+++--|+-+-|+
T Consensus 366 GGI~~~~di~kala 379 (511)
T 3usb_A 366 GGIKYSGDMVKALA 379 (511)
T ss_dssp SCCCSHHHHHHHHH
T ss_pred CCCCCHHHHHHHHH
Confidence 34555555555443
No 219
>3hv8_A Protein FIMX; EAL phosphodiesterase, biofilm, C-DI-GMP, hydrolase; HET: C2E; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 3hv9_A 4afy_A 4ag0_A
Probab=23.42 E-value=47 Score=28.34 Aligned_cols=78 Identities=13% Similarity=0.028 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHHCCCcccEEEEEcCceeecCCHHHHHHHHhcCCCcccccccchHHHHhcCCCchhhHHHHHHHHHHCC
Q 023717 7 FETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVG 86 (278)
Q Consensus 7 le~A~~~E~~vR~~GavPATIaii~G~i~VGl~~~el~~la~~~~~~~K~srRDl~~~~a~~~~GaTTVaaTm~lA~~aG 86 (278)
.+.+...=+..|+.|. .|++=| .|....-+.+|....-+.+|++|.=+.... +. .....+.+.+.+|+..|
T Consensus 152 ~~~~~~~l~~L~~~G~---~ialDD----fG~g~ssl~~L~~l~~d~iKiD~~~v~~~~-~~-~~~~~l~~ii~~~~~~~ 222 (268)
T 3hv8_A 152 LKQAKQLTQGLATLHC---QAAISQ----FGCSLNPFNALKHLTVQFIKIDGSFVQDLN-QV-ENQEILKGLIAELHEQQ 222 (268)
T ss_dssp HHHHHHHHHHHHHTTC---EEEEEE----ETCSSSTTGGGGTCCCSEEEECGGGGSSTT-SH-HHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHCCC---EEEEeC----CCCChHHHHHHHhCCCCEEEECHHHHHhhh-cC-hhHHHHHHHHHHHHHcC
Confidence 3444555556677775 566544 455555566666554568899875543322 11 33567888889999999
Q ss_pred CcEEEec
Q 023717 87 IPVFVTG 93 (278)
Q Consensus 87 I~VFaTG 93 (278)
++|.|.|
T Consensus 223 ~~viaeG 229 (268)
T 3hv8_A 223 KLSIVPF 229 (268)
T ss_dssp CEEEECC
T ss_pred CCEEEEe
Confidence 9998874
No 220
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=23.35 E-value=63 Score=23.70 Aligned_cols=26 Identities=23% Similarity=0.298 Sum_probs=20.8
Q ss_pred CCcccEEEEEcCce--eecCCHHHHHHHHh
Q 023717 21 GAVPATIAILEGLP--CVGLSTEELERLAK 48 (278)
Q Consensus 21 GavPATIaii~G~i--~VGl~~~el~~la~ 48 (278)
-.+|. + ++||+. ..|.+.++|+.+-+
T Consensus 65 ~~vP~-l-~~~g~~~~~~g~~~~~l~~~l~ 92 (100)
T 1wjk_A 65 FDIPV-F-HLNGQFLMMHRVNTSKLEKQLR 92 (100)
T ss_dssp SSCSE-E-EESSSEEEESSCCHHHHHHHHH
T ss_pred CCCCE-E-EECCEEEEecCCCHHHHHHHHH
Confidence 46894 4 579998 78999999988764
No 221
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=23.32 E-value=1.2e+02 Score=25.25 Aligned_cols=67 Identities=18% Similarity=0.221 Sum_probs=46.1
Q ss_pred chhhhHhHhhhCCeeEEeecCCCCcceeecCCCCccCcccCCHHHHHHHHHHHHhcCCCCeEEEEeCCCccCCCChHHHH
Q 023717 132 DIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASGRVIE 211 (278)
Q Consensus 132 Di~~TLE~LET~GV~V~gy~t~~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~~~l~l~~g~lvanPiP~e~~~~~~~i~ 211 (278)
++....+.|+..|+.+.+.... +. .+.+..-+.++.-..||.+. |+..|- .
T Consensus 62 ~~~~~~~~l~~~gl~i~~~~~~-----~~-----------~~~~~~~~~i~~A~~lGa~~--v~~~p~-----------~ 112 (257)
T 3lmz_A 62 QIRAFHDKCAAHKVTGYAVGPI-----YM-----------KSEEEIDRAFDYAKRVGVKL--IVGVPN-----------Y 112 (257)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEE-----EE-----------CSHHHHHHHHHHHHHHTCSE--EEEEEC-----------G
T ss_pred HHHHHHHHHHHcCCeEEEEecc-----cc-----------CCHHHHHHHHHHHHHhCCCE--EEecCC-----------H
Confidence 3566678899999999987631 21 46788888888888888553 333431 1
Q ss_pred HHHHHHHHHHHHcCCC
Q 023717 212 SAIQSALREAREKNIT 227 (278)
Q Consensus 212 ~~i~~Al~ea~~~gi~ 227 (278)
+.+++..+.|++.||+
T Consensus 113 ~~l~~l~~~a~~~gv~ 128 (257)
T 3lmz_A 113 ELLPYVDKKVKEYDFH 128 (257)
T ss_dssp GGHHHHHHHHHHHTCE
T ss_pred HHHHHHHHHHHHcCCE
Confidence 3456667778888885
No 222
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=23.20 E-value=65 Score=25.18 Aligned_cols=79 Identities=10% Similarity=0.204 Sum_probs=44.8
Q ss_pred ccchhhhHhHhhhCCeeEEeecC----CCCcceeecCCCCccCcc---cCCHHHHHHHHHHHHhcCCC-CeEEEEeCCCc
Q 023717 130 ILDIPRTLEYLETHGVCVAAYKT----NEFPAFFTETSGSKVPCR---VDSPEDCARLIDVNMKLKLG-SGLVIGVPIPR 201 (278)
Q Consensus 130 ILDi~~TLE~LET~GV~V~gy~t----~~fPaFy~~~Sg~~~~~r---~d~~~e~A~~~~~~~~l~l~-~g~lvanPiP~ 201 (278)
|-+...-=++++...|.||||=. +.++.|+.--..+ -.++ .++ .++++ .+++. .++++.++-.+
T Consensus 26 i~s~~e~e~fi~~~~v~VVGfF~~~~~~~~~~F~~~A~~~-~d~~F~~t~~-~~v~~------~~~v~~~~vvlfkkfde 97 (124)
T 2l4c_A 26 LTDVPAAMEFIAATEVAVIGFFQDLEIPAVPILHSMVQKF-PGVSFGISTD-SEVLT------HYNITGNTICLFRLVDN 97 (124)
T ss_dssp CCSHHHHHHHHHTSSEEEEEECSCTTSTHHHHHHHHHHHC-TTSEEEEECC-HHHHH------HTTCCSSCEEEEETTTT
T ss_pred cCCHHHHHHHHhcCCCEEEEEECCCCChhHHHHHHHHHhC-CCceEEEECh-HHHHH------HcCCCCCeEEEEEcCCC
Confidence 44666656778889999999942 2345554433332 2222 223 33443 34444 56888888653
Q ss_pred c---C------CCChHHHHHHHHH
Q 023717 202 E---H------AASGRVIESAIQS 216 (278)
Q Consensus 202 e---~------~~~~~~i~~~i~~ 216 (278)
. + ..+.+.|.++|+.
T Consensus 98 ~~~~~~g~~~~~~~~~~L~~FI~~ 121 (124)
T 2l4c_A 98 EQLNLEDEDIESIDATKLSRFIEI 121 (124)
T ss_dssp EEEEECHHHHTTCCHHHHHHHHHH
T ss_pred CceeecCcccCCCCHHHHHHHHHH
Confidence 3 2 2466667776654
No 223
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=23.18 E-value=52 Score=28.24 Aligned_cols=32 Identities=22% Similarity=0.204 Sum_probs=20.6
Q ss_pred chhh-hcCCCeEEEecccccccchhhhHhHhhhCCeeEEee
Q 023717 111 DLTE-LGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAY 150 (278)
Q Consensus 111 DL~e-L~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy 150 (278)
|+.+ |+...+.|..||. -.+|.+ ..|+||+.+
T Consensus 275 ~~~~~~~~ad~~v~~sg~-------~~lEA~-a~G~Pvi~~ 307 (375)
T 3beo_A 275 DFHNVAARSYLMLTDSGG-------VQEEAP-SLGVPVLVL 307 (375)
T ss_dssp HHHHHHHTCSEEEECCHH-------HHHHHH-HHTCCEEEC
T ss_pred HHHHHHHhCcEEEECCCC-------hHHHHH-hcCCCEEEe
Confidence 4444 5777777776621 145665 569999987
No 224
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=23.02 E-value=1.9e+02 Score=20.98 Aligned_cols=42 Identities=10% Similarity=-0.022 Sum_probs=26.1
Q ss_pred hhhhcCCCeEEE-----ecccccccc-hhhhHhHhhhCCeeEEeecCC
Q 023717 112 LTELGRTPVAVV-----SAGIKSILD-IPRTLEYLETHGVCVAAYKTN 153 (278)
Q Consensus 112 L~eL~rtpV~VV-----caG~KsILD-i~~TLE~LET~GV~V~gy~t~ 153 (278)
|.++...||+|. |..++..+. +..-.+.+...||.+++...|
T Consensus 26 l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d 73 (148)
T 3hcz_A 26 LYDVQAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIE 73 (148)
T ss_dssp GGGCCCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred hHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEec
Confidence 444544555554 777776653 334445556678999998755
No 225
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=22.99 E-value=1.5e+02 Score=22.31 Aligned_cols=90 Identities=17% Similarity=0.189 Sum_probs=47.7
Q ss_pred CCCeEEEecccccccchhhhHhHhhhC-CeeEEeecCCCCcceeecCCCCccCcccCCHHHHHHHHHHHHhcCCCCeEEE
Q 023717 117 RTPVAVVSAGIKSILDIPRTLEYLETH-GVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGLVI 195 (278)
Q Consensus 117 rtpV~VVcaG~KsILDi~~TLE~LET~-GV~V~gy~t~~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~~~l~l~~g~lv 195 (278)
+.+|++|.+|...- ..+++|+.. |..|+||=.++-..--..-.|+++=. .+ ++.++++.+ +. .-++|
T Consensus 4 ~~~vlIiGaG~~g~----~l~~~l~~~~g~~vvg~~d~~~~~~g~~i~g~pV~g-~~---~l~~~~~~~---~i-d~vii 71 (141)
T 3nkl_A 4 KKKVLIYGAGSAGL----QLANMLRQGKEFHPIAFIDDDRKKHKTTMQGITIYR-PK---YLERLIKKH---CI-STVLL 71 (141)
T ss_dssp CEEEEEECCSHHHH----HHHHHHHHSSSEEEEEEECSCGGGTTCEETTEEEEC-GG---GHHHHHHHH---TC-CEEEE
T ss_pred CCEEEEECCCHHHH----HHHHHHHhCCCcEEEEEEECCcccCCCEecCeEEEC-HH---HHHHHHHHC---CC-CEEEE
Confidence 56789999997653 345556544 89999997554221101113555533 34 444444433 22 34566
Q ss_pred EeCCCccCCCChHHHHHHHHHHHHHHHHcCCC
Q 023717 196 GVPIPREHAASGRVIESAIQSALREAREKNIT 227 (278)
Q Consensus 196 anPiP~e~~~~~~~i~~~i~~Al~ea~~~gi~ 227 (278)
+.| . .+.+.++++ +..+++.|++
T Consensus 72 a~~--~---~~~~~~~~i----~~~l~~~gv~ 94 (141)
T 3nkl_A 72 AVP--S---ASQVQKKVI----IESLAKLHVE 94 (141)
T ss_dssp CCT--T---SCHHHHHHH----HHHHHTTTCE
T ss_pred eCC--C---CCHHHHHHH----HHHHHHcCCe
Confidence 655 2 233344444 4455667765
No 226
>3pvs_A Replication-associated recombination protein A; maintenance of genome stability Pro recombination; 2.50A {Escherichia coli}
Probab=22.72 E-value=1.7e+02 Score=27.62 Aligned_cols=55 Identities=16% Similarity=0.089 Sum_probs=39.0
Q ss_pred ChHHHHHHHHHHHHHHH-HcCCCCccCChHHHHHHHHHhCCccHHHHHHHHHHHHHHHHHH
Q 023717 206 SGRVIESAIQSALREAR-EKNITGNAETPFLLARVNELTGGLSLASNIALVKNNALIGAKI 265 (278)
Q Consensus 206 ~~~~i~~~i~~Al~ea~-~~gi~Gk~vTPflL~~i~elT~G~Sl~aNiaLl~nNa~laa~I 265 (278)
+.+++..++++.+.+.. ..+-.+..++|-.+..|.+.++| |+.-+.|....+...
T Consensus 166 ~~edi~~il~~~l~~~~~~~~~~~~~i~~~al~~L~~~~~G-----d~R~lln~Le~a~~~ 221 (447)
T 3pvs_A 166 STEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNG-----DARRALNTLEMMADM 221 (447)
T ss_dssp CHHHHHHHHHHHHHCTTTSSTTSSEECCHHHHHHHHHHHCS-----CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhhhhccccCcCCHHHHHHHHHHCCC-----CHHHHHHHHHHHHHh
Confidence 46788899999887632 22345678999999999999988 555555555554443
No 227
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=22.63 E-value=2.7e+02 Score=26.56 Aligned_cols=66 Identities=15% Similarity=0.265 Sum_probs=45.9
Q ss_pred CCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecCCCCcceeecCCC
Q 023717 85 VGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSG 164 (278)
Q Consensus 85 aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy~~~Sg 164 (278)
...+||+=+.++++=-+ +--.. | ..-+||-|+|-=+. +.--+.|+..||.++ |.|....-|
T Consensus 291 ~~~DIliP~A~~n~i~~-----~~A~~---l---~ak~VvEgAN~P~t-~ea~~il~~~GI~~~-------Pd~~aNaGG 351 (421)
T 2yfq_A 291 KEYDIIVPAALENVITG-----ERAKT---I---NAKLVCEAANGPTT-PEGDKVLTERGINLT-------PDILTNSGG 351 (421)
T ss_dssp ----CEEECSCSSCSCH-----HHHTT---C---CCSEEECCSSSCSC-HHHHHHHHHHTCEEE-------CHHHHTTHH
T ss_pred CCccEEEEcCCcCcCCc-----ccHHH---c---CCeEEEeCCccccC-HHHHHHHHHCCCEEE-------ChHHHhCCC
Confidence 46789999998865221 11112 2 57788999998887 667799999999976 999988888
Q ss_pred CccCc
Q 023717 165 SKVPC 169 (278)
Q Consensus 165 ~~~~~ 169 (278)
+.+.|
T Consensus 352 V~vS~ 356 (421)
T 2yfq_A 352 VLVSY 356 (421)
T ss_dssp HHHHH
T ss_pred eEEEE
Confidence 76654
No 228
>1njg_A DNA polymerase III subunit gamma; rossman-like fold, AAA+ ATPase domains, sensor 1, sensor 2, transferase; HET: DNA; 2.20A {Escherichia coli} SCOP: c.37.1.20 PDB: 1njf_A*
Probab=22.60 E-value=2.4e+02 Score=21.76 Aligned_cols=35 Identities=20% Similarity=0.198 Sum_probs=27.4
Q ss_pred CChHHHHHHHHHHHHHHHHcCCCCccCChHHHHHHHHHhCC
Q 023717 205 ASGRVIESAIQSALREAREKNITGNAETPFLLARVNELTGG 245 (278)
Q Consensus 205 ~~~~~i~~~i~~Al~ea~~~gi~Gk~vTPflL~~i~elT~G 245 (278)
++.+++.+++++-+.+ .|..++|-.+.+|.+.++|
T Consensus 185 l~~~e~~~~l~~~~~~------~~~~~~~~~~~~l~~~~~G 219 (250)
T 1njg_A 185 LDVEQIRHQLEHILNE------EHIAHEPRALQLLARAAEG 219 (250)
T ss_dssp CCHHHHHHHHHHHHHH------TTCCBCHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHh------cCCCCCHHHHHHHHHHcCC
Confidence 3457778888776653 3568999999999999998
No 229
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=22.56 E-value=65 Score=27.37 Aligned_cols=91 Identities=12% Similarity=0.077 Sum_probs=48.6
Q ss_pred hhhhHhHhhhCCeeEEeecCCCCcceeecCCCCccCcccCCHHHHHHHHHHHHhcCCCCeEEEEeCCCccCCC----ChH
Q 023717 133 IPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAA----SGR 208 (278)
Q Consensus 133 i~~TLE~LET~GV~V~gy~t~~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~~~l~l~~g~lvanPiP~e~~~----~~~ 208 (278)
+...-+.|+..|+.|.++....+..| .-.+. .-..|-.+.+.+-+.++.-..||.+. ++..+.+..... ..+
T Consensus 68 ~~~~~~~l~~~gl~i~~~~~~~~~~~-~l~~~-d~~~r~~~~~~~~~~i~~A~~lG~~~--v~~~~~~~~~~~~~~~~~~ 143 (295)
T 3cqj_A 68 RLALVNAIVETGVRVPSMCLSAHRRF-PLGSE-DDAVRAQGLEIMRKAIQFAQDVGIRV--IQLAGYDVYYQEANNETRR 143 (295)
T ss_dssp HHHHHHHHHHHCCEEEEEEEGGGGTS-CTTCS-SHHHHHHHHHHHHHHHHHHHHHTCCE--EEECCCSCSSSCCCHHHHH
T ss_pred HHHHHHHHHHcCCeEEEEecCcccCC-CCCCC-CHHHHHHHHHHHHHHHHHHHHcCCCE--EEECCCCCCcCcCHHHHHH
Confidence 55667789999999988753211111 00000 00011122355667777778888653 333333211111 123
Q ss_pred HHHHHHHHHHHHHHHcCCC
Q 023717 209 VIESAIQSALREAREKNIT 227 (278)
Q Consensus 209 ~i~~~i~~Al~ea~~~gi~ 227 (278)
.+-+.+++..+.|++.||+
T Consensus 144 ~~~~~l~~l~~~a~~~Gv~ 162 (295)
T 3cqj_A 144 RFRDGLKESVEMASRAQVT 162 (295)
T ss_dssp HHHHHHHHHHHHHHHHTCE
T ss_pred HHHHHHHHHHHHHHHhCCE
Confidence 4556677788888888885
No 230
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=22.52 E-value=1.2e+02 Score=29.08 Aligned_cols=22 Identities=18% Similarity=0.170 Sum_probs=14.2
Q ss_pred chhhHHHHHHHHHHCCCcEEEe
Q 023717 71 GATTVSATMFFASMVGIPVFVT 92 (278)
Q Consensus 71 GaTTVaaTm~lA~~aGI~VFaT 92 (278)
|||=.|+-..+.+..|.+|+++
T Consensus 28 Gg~Gms~lA~~l~~~G~~V~~s 49 (524)
T 3hn7_A 28 CGTFMGSLALLARALGHTVTGS 49 (524)
T ss_dssp TSHHHHHHHHHHHHTTCEEEEE
T ss_pred cHhhHHHHHHHHHhCCCEEEEE
Confidence 5666666666666677776664
No 231
>3cf4_G Acetyl-COA decarboxylase/synthase epsilon subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=22.48 E-value=35 Score=27.89 Aligned_cols=45 Identities=11% Similarity=0.159 Sum_probs=29.8
Q ss_pred cccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEee
Q 023717 106 MDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAY 150 (278)
Q Consensus 106 ~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy 150 (278)
.+.-+++..=++.||+++-.|+..==-...-.++.|..|+||+.-
T Consensus 24 v~~aa~~L~~AkrPvil~G~g~~~~~a~~~l~~lae~~~iPV~~t 68 (170)
T 3cf4_G 24 PEMAAKIISKAKRPLLMVGTLALDPELLDRVVKISKAANIPIAAT 68 (170)
T ss_dssp HHHHHHHHHHCSSEEEEECSTTCCHHHHHHHHHHHHHHTCCEEEC
T ss_pred HHHHHHHHHcCCCCEEEECCCccchhHHHHHHHHHHHhCCCEEEC
Confidence 344456666688899888888743211234456778889999865
No 232
>3bos_A Putative DNA replication factor; P-loop containing nucleoside triphosphate hydrolases, struct genomics; HET: MSE CDP; 1.75A {Shewanella amazonensis} PDB: 3sc3_A
Probab=22.45 E-value=2.9e+02 Score=21.79 Aligned_cols=59 Identities=12% Similarity=-0.092 Sum_probs=39.7
Q ss_pred eEEEEeCCCccCCCChHHHHHHHHHHHHHHHHcCCCCccCChHHHHHHHHHhCCccHHHHHHHHHHHHHHHHHHH
Q 023717 192 GLVIGVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLARVNELTGGLSLASNIALVKNNALIGAKIS 266 (278)
Q Consensus 192 g~lvanPiP~e~~~~~~~i~~~i~~Al~ea~~~gi~Gk~vTPflL~~i~elT~G~Sl~aNiaLl~nNa~laa~IA 266 (278)
+..+-.|.|.+ ++..+++++.++ + .|..++|-.+..+.+.++| |+.-++|...-+...|
T Consensus 166 ~~~i~l~~~~~-----~~~~~~l~~~~~---~---~~~~~~~~~~~~l~~~~~g-----~~r~l~~~l~~~~~~a 224 (242)
T 3bos_A 166 GLTYQLQPMMD-----DEKLAALQRRAA---M---RGLQLPEDVGRFLLNRMAR-----DLRTLFDVLDRLDKAS 224 (242)
T ss_dssp SEEEECCCCCG-----GGHHHHHHHHHH---H---TTCCCCHHHHHHHHHHTTT-----CHHHHHHHHHHHHHHH
T ss_pred CceEEeCCCCH-----HHHHHHHHHHHH---H---cCCCCCHHHHHHHHHHccC-----CHHHHHHHHHHHHHHH
Confidence 34666666653 455667766654 2 2457999999999999987 6666666666554443
No 233
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=22.43 E-value=2.6e+02 Score=23.48 Aligned_cols=47 Identities=6% Similarity=0.133 Sum_probs=26.0
Q ss_pred CcccCCHHHHHHHHHHH-HhcCCCCeEEEEeC-C---CccCCCChHHHHHHHH
Q 023717 168 PCRVDSPEDCARLIDVN-MKLKLGSGLVIGVP-I---PREHAASGRVIESAIQ 215 (278)
Q Consensus 168 ~~r~d~~~e~A~~~~~~-~~l~l~~g~lvanP-i---P~e~~~~~~~i~~~i~ 215 (278)
+.-+.+++++.+++..- .++| +--+||.|. + ..-..++.+..++.++
T Consensus 74 ~~Dv~d~~~v~~~~~~~~~~~g-~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 125 (260)
T 3un1_A 74 AGDISKPETADRIVREGIERFG-RIDSLVNNAGVFLAKPFVEMTQEDYDHNLG 125 (260)
T ss_dssp ESCTTSHHHHHHHHHHHHHHHS-CCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred EccCCCHHHHHHHHHHHHHHCC-CCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 34567888888877643 3444 223556553 1 1123456777776544
No 234
>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}
Probab=22.42 E-value=51 Score=25.09 Aligned_cols=20 Identities=30% Similarity=0.340 Sum_probs=17.9
Q ss_pred chhhhHhHhhhCCeeEEeec
Q 023717 132 DIPRTLEYLETHGVCVAAYK 151 (278)
Q Consensus 132 Di~~TLE~LET~GV~V~gy~ 151 (278)
||.+++++|+.+||+++.-.
T Consensus 114 di~~~~~~l~~~G~~~~~~~ 133 (159)
T 3gm5_A 114 DMDRKVEELYRKGMKVIQKG 133 (159)
T ss_dssp CHHHHHHHHHHTTCCEEEEE
T ss_pred CHHHHHHHHHHCCCcEeecc
Confidence 79999999999999998654
No 235
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=22.41 E-value=3.1e+02 Score=22.92 Aligned_cols=104 Identities=15% Similarity=0.127 Sum_probs=52.3
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhh-CCee-EEeecCCCCcceeec
Q 023717 84 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLET-HGVC-VAAYKTNEFPAFFTE 161 (278)
Q Consensus 84 ~aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET-~GV~-V~gy~t~~fPaFy~~ 161 (278)
+.|=.+++|||-||+-+ -+..-|.+-+- .|++++--. =.+..+.+.|+. .+-. +..
T Consensus 6 l~~k~~lVTGas~GIG~------aia~~l~~~G~-~V~~~~r~~---~~~~~~~~~l~~~~~~~~~~~------------ 63 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGL------ATVELLLEAGA-AVAFCARDG---ERLRAAESALRQRFPGARLFA------------ 63 (265)
T ss_dssp CTTCEEEEETCSSHHHH------HHHHHHHHTTC-EEEEEESCH---HHHHHHHHHHHHHSTTCCEEE------------
T ss_pred cCCCEEEEeCCCChHHH------HHHHHHHHCCC-EEEEEeCCH---HHHHHHHHHHHHhcCCceEEE------------
Confidence 34556899999999844 34444444432 233333211 123445555554 2211 221
Q ss_pred CCCCccCcccCCHHHHHHHHHHH-HhcCCCCeEEEEeCC----CccCCCChHHHHHHHH
Q 023717 162 TSGSKVPCRVDSPEDCARLIDVN-MKLKLGSGLVIGVPI----PREHAASGRVIESAIQ 215 (278)
Q Consensus 162 ~Sg~~~~~r~d~~~e~A~~~~~~-~~l~l~~g~lvanPi----P~e~~~~~~~i~~~i~ 215 (278)
+..-+.+++++.+++..- ..+|- --+||.|.= ..-..++.+++++.++
T Consensus 64 -----~~~Dv~~~~~v~~~~~~~~~~~g~-id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 116 (265)
T 3lf2_A 64 -----SVCDVLDALQVRAFAEACERTLGC-ASILVNNAGQGRVSTFAETTDEAWSEELQ 116 (265)
T ss_dssp -----EECCTTCHHHHHHHHHHHHHHHCS-CSEEEECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred -----EeCCCCCHHHHHHHHHHHHHHcCC-CCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 123456778887777643 33442 234555532 1112466777766554
No 236
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=22.38 E-value=46 Score=28.31 Aligned_cols=27 Identities=19% Similarity=0.208 Sum_probs=13.1
Q ss_pred ccCCCChHHHHHHHHHHHHHHHHcCCC
Q 023717 201 REHAASGRVIESAIQSALREAREKNIT 227 (278)
Q Consensus 201 ~e~~~~~~~i~~~i~~Al~ea~~~gi~ 227 (278)
..|...+.-++.+.+..-.|-...||+
T Consensus 159 ~~Y~asKaa~~~l~~~la~e~~~~gi~ 185 (262)
T 3ksu_A 159 STYAGNKAPVEHYTRAASKELMKQQIS 185 (262)
T ss_dssp CC-----CHHHHHHHHHHHHTTTTTCE
T ss_pred chhHHHHHHHHHHHHHHHHHHHHcCcE
Confidence 456667666666666555555555675
No 237
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=22.29 E-value=3.6e+02 Score=25.04 Aligned_cols=11 Identities=9% Similarity=0.157 Sum_probs=6.8
Q ss_pred CCCeEEEEeCC
Q 023717 189 LGSGLVIGVPI 199 (278)
Q Consensus 189 l~~g~lvanPi 199 (278)
.+-|+-..+|-
T Consensus 292 ~~eg~~~~v~~ 302 (366)
T 4fo4_A 292 VPEGIEGRIAY 302 (366)
T ss_dssp CCSBCEEEEEC
T ss_pred cCCCcEEecCC
Confidence 56666666654
No 238
>3lkb_A Probable branched-chain amino acid ABC transporter, amino acid binding protein; branched amino acid, PSI-II, NYSGXRC, structural genomics; 2.40A {Thermus thermophilus}
Probab=21.97 E-value=3.5e+02 Score=23.40 Aligned_cols=121 Identities=10% Similarity=0.036 Sum_probs=69.2
Q ss_pred hHHHHHHHHHHCCCcEEEeccccccc--CCCccccccccc-----------hhh-hcCCCeEEEecccccccc-hhhhHh
Q 023717 74 TVSATMFFASMVGIPVFVTGGIGGVH--RHGEHTMDISSD-----------LTE-LGRTPVAVVSAGIKSILD-IPRTLE 138 (278)
Q Consensus 74 TVaaTm~lA~~aGI~VFaTGGIGGVH--rg~~~t~DiSaD-----------L~e-L~rtpV~VVcaG~KsILD-i~~TLE 138 (278)
+..+.+-++...+|+++....--..- +.....|-++.| |.+ ++-..|++|..---.=.+ ...-.+
T Consensus 86 ~~~~~~~~~~~~~iP~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~~~~g~~~iaii~~~~~~g~~~~~~~~~ 165 (392)
T 3lkb_A 86 ANLQLKPLIQELRIPTIPASMHIELIDPPNNDYIFLPTTSYSEQVVALLEYIAREKKGAKVALVVHPSPFGRAPVEDARK 165 (392)
T ss_dssp HHHHHHHHHHHHTCCEEESCCCGGGGSSSSCTTBCEEECCHHHHHHHHHHHHHHHCTTCEEEEEECSSHHHHTTHHHHHH
T ss_pred HHHHHHHHHHhCCceEEecccChhhccCCCCCceEecCCChHHHHHHHHHHHHHhCCCCEEEEEEeCCchhhhHHHHHHH
Confidence 34455678889999999855422111 122223444433 333 477889888743211111 123456
Q ss_pred HhhhCCeeEEeec-----CCCCcceee--cCCCCccCcccCCHHHHHHHHHHHHhcCCCCeEE
Q 023717 139 YLETHGVCVAAYK-----TNEFPAFFT--ETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGLV 194 (278)
Q Consensus 139 ~LET~GV~V~gy~-----t~~fPaFy~--~~Sg~~~~~r~d~~~e~A~~~~~~~~l~l~~g~l 194 (278)
.|+.+|++|+... +.+|..... +.++..+=+-..+..+++.++++-+++|+...++
T Consensus 166 ~l~~~G~~v~~~~~~~~~~~d~~~~~~~l~~~~~dav~~~~~~~~a~~~~~~~~~~g~~~~~~ 228 (392)
T 3lkb_A 166 AARELGLQIVDVQEVGSGNLDNTALLKRFEQAGVEYVVHQNVAGPVANILKDAKRLGLKMRHL 228 (392)
T ss_dssp HHHHHTCEEEEEEECCTTCCCCHHHHHHHHHTTCCEEEEESCHHHHHHHHHHHHHTTCCCEEE
T ss_pred HHHHcCCeEEEEEeeCCCCcCHHHHHHHHHhcCCCEEEEecCcchHHHHHHHHHHcCCCceEE
Confidence 7889999988643 223333332 1233333333467888999999999999876543
No 239
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=21.84 E-value=3.6e+02 Score=22.93 Aligned_cols=107 Identities=14% Similarity=0.177 Sum_probs=56.9
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEeccccccc----chhhhHhHhhhCCeeEEeecCCCCccee
Q 023717 84 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSIL----DIPRTLEYLETHGVCVAAYKTNEFPAFF 159 (278)
Q Consensus 84 ~aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsIL----Di~~TLE~LET~GV~V~gy~t~~fPaFy 159 (278)
+.|=.+++|||-||+-+ -+..-|.+-+- .|++++--....- .+..+.+.++..|..+..+.
T Consensus 7 l~~k~vlVTGas~GIG~------aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 71 (285)
T 3sc4_A 7 LRGKTMFISGGSRGIGL------AIAKRVAADGA-NVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIV-------- 71 (285)
T ss_dssp CTTCEEEEESCSSHHHH------HHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEE--------
T ss_pred CCCCEEEEECCCCHHHH------HHHHHHHHCCC-EEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEE--------
Confidence 34556899999999844 34444443332 3444433222211 34556667777676555332
Q ss_pred ecCCCCccCcccCCHHHHHHHHHHH-HhcCCCCeEEEEeC-C---CccCCCChHHHHHHHH
Q 023717 160 TETSGSKVPCRVDSPEDCARLIDVN-MKLKLGSGLVIGVP-I---PREHAASGRVIESAIQ 215 (278)
Q Consensus 160 ~~~Sg~~~~~r~d~~~e~A~~~~~~-~~l~l~~g~lvanP-i---P~e~~~~~~~i~~~i~ 215 (278)
.-+.+++++.+++..- ..+| +--+||.|. + ..-..++.+.+++.++
T Consensus 72 ---------~Dv~~~~~v~~~~~~~~~~~g-~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 122 (285)
T 3sc4_A 72 ---------GDIRDGDAVAAAVAKTVEQFG-GIDICVNNASAINLGSIEEVPLKRFDLMNG 122 (285)
T ss_dssp ---------CCTTSHHHHHHHHHHHHHHHS-CCSEEEECCCCCCCCCTTTSCHHHHHHHHH
T ss_pred ---------CCCCCHHHHHHHHHHHHHHcC-CCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 2355677777766633 3333 223455552 1 1123567777776654
No 240
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=21.64 E-value=2.1e+02 Score=24.21 Aligned_cols=104 Identities=16% Similarity=0.219 Sum_probs=54.8
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCe---eEEeecCCCCcceee
Q 023717 84 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGV---CVAAYKTNEFPAFFT 160 (278)
Q Consensus 84 ~aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV---~V~gy~t~~fPaFy~ 160 (278)
+.|=.|++|||-||+-+ -+..-|.+-+- .|++++- +--.+..+.+.|+..|. .+..
T Consensus 9 l~~k~vlVTGas~gIG~------aia~~l~~~G~-~V~~~~r---~~~~~~~~~~~l~~~~~~~~~~~~----------- 67 (281)
T 3svt_A 9 FQDRTYLVTGGGSGIGK------GVAAGLVAAGA-SVMIVGR---NPDKLAGAVQELEALGANGGAIRY----------- 67 (281)
T ss_dssp CTTCEEEEETTTSHHHH------HHHHHHHHTTC-EEEEEES---CHHHHHHHHHHHHTTCCSSCEEEE-----------
T ss_pred cCCCEEEEeCCCcHHHH------HHHHHHHHCCC-EEEEEeC---CHHHHHHHHHHHHHhCCCCceEEE-----------
Confidence 45667999999999954 34444444432 2333322 22234556666766553 2211
Q ss_pred cCCCCccCcccCCHHHHHHHHHHH-HhcCCCCeEEEEeCCC-----ccCCCChHHHHHHHH
Q 023717 161 ETSGSKVPCRVDSPEDCARLIDVN-MKLKLGSGLVIGVPIP-----REHAASGRVIESAIQ 215 (278)
Q Consensus 161 ~~Sg~~~~~r~d~~~e~A~~~~~~-~~l~l~~g~lvanPiP-----~e~~~~~~~i~~~i~ 215 (278)
++.-+.+++++.+++..- ..+|- --+||.|.=. .-..++.+.+++.++
T Consensus 68 ------~~~Dv~~~~~v~~~~~~~~~~~g~-id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 121 (281)
T 3svt_A 68 ------EPTDITNEDETARAVDAVTAWHGR-LHGVVHCAGGSENIGPITQVDSEAWRRTVD 121 (281)
T ss_dssp ------EECCTTSHHHHHHHHHHHHHHHSC-CCEEEECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred ------EeCCCCCHHHHHHHHHHHHHHcCC-CCEEEECCCcCCCCCCcccCCHHHHHHHHH
Confidence 123466788887777643 33332 2345554321 223566666666543
No 241
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=21.58 E-value=3.1e+02 Score=21.77 Aligned_cols=39 Identities=21% Similarity=0.152 Sum_probs=26.1
Q ss_pred CCCeEEEecc-cccccchhhhHhHhhhCCeeEEeecCCCCcce
Q 023717 117 RTPVAVVSAG-IKSILDIPRTLEYLETHGVCVAAYKTNEFPAF 158 (278)
Q Consensus 117 rtpV~VVcaG-~KsILDi~~TLE~LET~GV~V~gy~t~~fPaF 158 (278)
..|++|++-| .-+-.....-+++|..+|..|+.|. +|+|
T Consensus 45 ~~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d---~~G~ 84 (315)
T 4f0j_A 45 NGRTILLMHGKNFCAGTWERTIDVLADAGYRVIAVD---QVGF 84 (315)
T ss_dssp CSCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEEC---CTTS
T ss_pred CCCeEEEEcCCCCcchHHHHHHHHHHHCCCeEEEee---cCCC
Confidence 3455555555 3344456677889999999999884 4554
No 242
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=21.53 E-value=1.7e+02 Score=26.18 Aligned_cols=31 Identities=23% Similarity=0.277 Sum_probs=17.4
Q ss_pred CCCeEEEecccccccchhhhHhHhhhCCeeEEeecC
Q 023717 117 RTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKT 152 (278)
Q Consensus 117 rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t 152 (278)
+.||+ .+-|..+=.|+-+-| . .|.-.|+.++
T Consensus 256 ~ipvi-a~GGI~~~~d~~kal---~-~GAd~V~igr 286 (332)
T 1vcf_A 256 HLPLV-ASGGVYTGTDGAKAL---A-LGADLLAVAR 286 (332)
T ss_dssp SSCEE-EESSCCSHHHHHHHH---H-HTCSEEEECG
T ss_pred CCeEE-EECCCCCHHHHHHHH---H-hCCChHhhhH
Confidence 44432 344556655655444 3 3777777776
No 243
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=21.50 E-value=3.4e+02 Score=22.56 Aligned_cols=108 Identities=17% Similarity=0.149 Sum_probs=54.3
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEeccc---------ccccchhhhHhHhhhCCeeEEeecCCC
Q 023717 84 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGI---------KSILDIPRTLEYLETHGVCVAAYKTNE 154 (278)
Q Consensus 84 ~aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~---------KsILDi~~TLE~LET~GV~V~gy~t~~ 154 (278)
+.|=.|++|||-||+-+ -+..-|.+-+- .|++++-.. .+--++....+.++..|..+..+.
T Consensus 8 l~gk~vlVTGas~gIG~------~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 77 (287)
T 3pxx_A 8 VQDKVVLVTGGARGQGR------SHAVKLAEEGA-DIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAE--- 77 (287)
T ss_dssp TTTCEEEEETTTSHHHH------HHHHHHHHTTC-EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEE---
T ss_pred cCCCEEEEeCCCChHHH------HHHHHHHHCCC-eEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEE---
Confidence 44667999999999844 34444444432 233332210 011223344444555554443322
Q ss_pred CcceeecCCCCccCcccCCHHHHHHHHHHH-HhcCCCCeEEEEeCC--CccCCCChHHHHHHHHH
Q 023717 155 FPAFFTETSGSKVPCRVDSPEDCARLIDVN-MKLKLGSGLVIGVPI--PREHAASGRVIESAIQS 216 (278)
Q Consensus 155 fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~-~~l~l~~g~lvanPi--P~e~~~~~~~i~~~i~~ 216 (278)
.-+.+++++.+++..- ..+| +--+||.|.= +....++.+.+++.++-
T Consensus 78 --------------~D~~~~~~v~~~~~~~~~~~g-~id~lv~nAg~~~~~~~~~~~~~~~~~~~ 127 (287)
T 3pxx_A 78 --------------VDVRDRAAVSRELANAVAEFG-KLDVVVANAGICPLGAHLPVQAFADAFDV 127 (287)
T ss_dssp --------------CCTTCHHHHHHHHHHHHHHHS-CCCEEEECCCCCCCCTTCCTHHHHHHHHH
T ss_pred --------------ccCCCHHHHHHHHHHHHHHcC-CCCEEEECCCcCcccCcCCHHHHHHHhhh
Confidence 3456777777776633 3333 2235665531 11133677777766653
No 244
>1ais_A TBP, protein (tata-binding protein); hyperthermophIle, ribosome binding, complex (ribosome binding/ DNA); HET: DNA 5IU; 2.10A {Pyrococcus woesei} SCOP: d.129.1.1 d.129.1.1 PDB: 1d3u_A* 1pcz_A
Probab=21.39 E-value=33 Score=29.35 Aligned_cols=26 Identities=38% Similarity=0.546 Sum_probs=20.5
Q ss_pred EEecccccccchhhhHhH----hhhCCeeE
Q 023717 122 VVSAGIKSILDIPRTLEY----LETHGVCV 147 (278)
Q Consensus 122 VVcaG~KsILDi~~TLE~----LET~GV~V 147 (278)
+||+|+||.=|....++. |+..|.++
T Consensus 65 iv~TGakS~~~~~~a~~~i~~~L~~lG~~~ 94 (182)
T 1ais_A 65 LVVTGAKSVQDIERAVAKLAQKLKSIGVKF 94 (182)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHHTTCCC
T ss_pred EEEecCCCHHHHHHHHHHHHHHHHHcCCCc
Confidence 689999999988876655 77888764
No 245
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=21.36 E-value=1.1e+02 Score=22.08 Aligned_cols=82 Identities=17% Similarity=0.198 Sum_probs=47.1
Q ss_pred CCHHHHHHHHhcCCCcccccccchHHHHhcCCCchhhHHHHHHHHHHCCCcEEEecccccccCCCccccccccchhhhcC
Q 023717 38 LSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGR 117 (278)
Q Consensus 38 l~~~el~~la~~~~~~~K~srRDl~~~~a~~~~GaTTVaaTm~lA~~aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~r 117 (278)
++.+|+..+-+..+++.=+.-|+-...-.....|+.-+ + --++...+.+|.+
T Consensus 4 is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~~i------------p----------------~~~l~~~~~~l~~ 55 (100)
T 3foj_A 4 ITVTELKEKILDANPVNIVDVRTDQETAMGIIPGAETI------------P----------------MNSIPDNLNYFND 55 (100)
T ss_dssp ECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTCEEC------------C----------------GGGGGGCGGGSCT
T ss_pred cCHHHHHHHHhcCCCcEEEECCCHHHHhcCcCCCCEEC------------C----------------HHHHHHHHHhCCC
Confidence 46778777653334566677777544322222332211 1 1134455566654
Q ss_pred -CCeEEEecccccccchhhhHhHhhhCCeeEEee
Q 023717 118 -TPVAVVSAGIKSILDIPRTLEYLETHGVCVAAY 150 (278)
Q Consensus 118 -tpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy 150 (278)
.||+|+|.+.. .=.+...+|..+|..|.-+
T Consensus 56 ~~~ivvyC~~g~---rs~~a~~~L~~~G~~v~~l 86 (100)
T 3foj_A 56 NETYYIICKAGG---RSAQVVQYLEQNGVNAVNV 86 (100)
T ss_dssp TSEEEEECSSSH---HHHHHHHHHHTTTCEEEEE
T ss_pred CCcEEEEcCCCc---hHHHHHHHHHHCCCCEEEe
Confidence 78999997653 2456678889999866544
No 246
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=21.24 E-value=1.2e+02 Score=22.01 Aligned_cols=47 Identities=23% Similarity=0.392 Sum_probs=30.0
Q ss_pred cccchhhhcC-CCeEEEecccccccchhhhHhHhhhCCeeEEeecCCCCcce
Q 023717 108 ISSDLTELGR-TPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAF 158 (278)
Q Consensus 108 iSaDL~eL~r-tpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~fPaF 158 (278)
+...+.+|.+ .||+|+|.+.. .=.....+|..+|..|.-+ ..-|.++
T Consensus 46 l~~~~~~l~~~~~iv~yC~~g~---rs~~a~~~L~~~G~~v~~l-~GG~~~W 93 (103)
T 3eme_A 46 IPDNLNSFNKNEIYYIVCAGGV---RSAKVVEYLEANGIDAVNV-EGGMHAW 93 (103)
T ss_dssp GGGCGGGCCTTSEEEEECSSSS---HHHHHHHHHHTTTCEEEEE-TTHHHHH
T ss_pred HHHHHHhCCCCCeEEEECCCCh---HHHHHHHHHHHCCCCeEEe-CCCHHHH
Confidence 3344555543 68999998763 3456778899999866533 3344554
No 247
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=21.22 E-value=1.1e+02 Score=26.73 Aligned_cols=68 Identities=15% Similarity=0.141 Sum_probs=40.1
Q ss_pred HHHHHHHHCCCcEEEecccccc-----cCCCccccccccc----hhhhc--CCCeEEEecccccccchhhhHhHhhhCCe
Q 023717 77 ATMFFASMVGIPVFVTGGIGGV-----HRHGEHTMDISSD----LTELG--RTPVAVVSAGIKSILDIPRTLEYLETHGV 145 (278)
Q Consensus 77 aTm~lA~~aGI~VFaTGGIGGV-----Hrg~~~t~DiSaD----L~eL~--rtpV~VVcaG~KsILDi~~TLE~LET~GV 145 (278)
.++.+|+..|.+|++|..---- .-|+...+|.+.+ +.++. ...+++-|+|.. .+...++.|...|.
T Consensus 165 ~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~d~vid~~g~~---~~~~~~~~l~~~G~ 241 (328)
T 1xa0_A 165 LAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDPVGGR---TLATVLSRMRYGGA 241 (328)
T ss_dssp HHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEEEECC---------CCSCCEEEEEECSTTT---THHHHHHTEEEEEE
T ss_pred HHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcEEEecCCcHHHHHHHhcCCcccEEEECCcHH---HHHHHHHhhccCCE
Confidence 3467788889999988764210 0144445554321 23332 245788899974 46677888888886
Q ss_pred eE
Q 023717 146 CV 147 (278)
Q Consensus 146 ~V 147 (278)
-|
T Consensus 242 ~v 243 (328)
T 1xa0_A 242 VA 243 (328)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 248
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=21.19 E-value=2.6e+02 Score=23.78 Aligned_cols=105 Identities=12% Similarity=0.111 Sum_probs=54.6
Q ss_pred HHCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecCCCCcceeecC
Q 023717 83 SMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTET 162 (278)
Q Consensus 83 ~~aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy~~~ 162 (278)
.+.|=.+++|||-||+-+ -+..-|.+-+- .|++++--. =....+.+.++..|..+..+..
T Consensus 30 ~l~gk~~lVTGas~GIG~------aia~~la~~G~-~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~---------- 89 (275)
T 4imr_A 30 GLRGRTALVTGSSRGIGA------AIAEGLAGAGA-HVILHGVKP---GSTAAVQQRIIASGGTAQELAG---------- 89 (275)
T ss_dssp CCTTCEEEETTCSSHHHH------HHHHHHHHTTC-EEEEEESST---TTTHHHHHHHHHTTCCEEEEEC----------
T ss_pred CCCCCEEEEECCCCHHHH------HHHHHHHHCCC-EEEEEcCCH---HHHHHHHHHHHhcCCeEEEEEe----------
Confidence 456777999999999944 34544444432 344433322 2344556666666655543332
Q ss_pred CCCccCcccCCHHHHHHHHHHHHhcCCCCeEEEEeCC---C-ccCCCChHHHHHHHH
Q 023717 163 SGSKVPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPI---P-REHAASGRVIESAIQ 215 (278)
Q Consensus 163 Sg~~~~~r~d~~~e~A~~~~~~~~l~l~~g~lvanPi---P-~e~~~~~~~i~~~i~ 215 (278)
.+.+++++.+++..-.+.| +--+||.|.= + .-..++.+.+++.++
T Consensus 90 -------Dv~~~~~~~~~~~~~~~~g-~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 138 (275)
T 4imr_A 90 -------DLSEAGAGTDLIERAEAIA-PVDILVINASAQINATLSALTPNDLAFQLA 138 (275)
T ss_dssp -------CTTSTTHHHHHHHHHHHHS-CCCEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred -------cCCCHHHHHHHHHHHHHhC-CCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 2334555555555444433 2235555532 1 122456666665543
No 249
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=21.06 E-value=2.6e+02 Score=23.51 Aligned_cols=18 Identities=39% Similarity=0.514 Sum_probs=12.3
Q ss_pred HHCCCcEEEecccccccC
Q 023717 83 SMVGIPVFVTGGIGGVHR 100 (278)
Q Consensus 83 ~~aGI~VFaTGGIGGVHr 100 (278)
.+.|=.+++|||-||+-+
T Consensus 18 ~l~~k~vlVTGas~gIG~ 35 (253)
T 2nm0_A 18 SHMSRSVLVTGGNRGIGL 35 (253)
T ss_dssp --CCCEEEEETTTSHHHH
T ss_pred CCCCCEEEEeCCCCHHHH
Confidence 455667889999888843
No 250
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=21.04 E-value=52 Score=28.72 Aligned_cols=37 Identities=16% Similarity=0.188 Sum_probs=32.0
Q ss_pred hhcCCCeEEEecccccccchhhhHhHhhhCCeeEEee
Q 023717 114 ELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAY 150 (278)
Q Consensus 114 eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy 150 (278)
..+..=+.|+..+.-++-++.+++++|+..|++++|+
T Consensus 213 ~~aD~vilVv~~~~~~~~~~~~~~~~l~~~~~~~~Gv 249 (271)
T 3bfv_A 213 KFTGNVVYVVNSENNNKDEVKKGKELIEATGAKLLGV 249 (271)
T ss_dssp HHHCEEEEEEETTSCCHHHHHHHHHHHHTTTCEEEEE
T ss_pred HHCCEEEEEEeCCCCcHHHHHHHHHHHHhCCCCEEEE
Confidence 3456667888899999999999999999999999887
No 251
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=20.88 E-value=4.7e+02 Score=23.71 Aligned_cols=35 Identities=14% Similarity=0.268 Sum_probs=26.9
Q ss_pred HHHHHHHHCCCcEEEec-ccccccCCCccccccccc
Q 023717 77 ATMFFASMVGIPVFVTG-GIGGVHRHGEHTMDISSD 111 (278)
Q Consensus 77 aTm~lA~~aGI~VFaTG-GIGGVHrg~~~t~DiSaD 111 (278)
.+..++..+|+++..+| .+|-+-.|-+.|.-++-|
T Consensus 28 ~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTld 63 (275)
T 1o66_A 28 SFAALMDDAGVEMLLVGDSLGMAVQGRKSTLPVSLR 63 (275)
T ss_dssp HHHHHHHHTTCCEEEECTTHHHHTTCCSSSTTCCHH
T ss_pred HHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHH
Confidence 56778899999999998 455577787777666654
No 252
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=20.86 E-value=2.6e+02 Score=23.63 Aligned_cols=27 Identities=33% Similarity=0.651 Sum_probs=17.9
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhc
Q 023717 84 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELG 116 (278)
Q Consensus 84 ~aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~ 116 (278)
+.|=.|++|||-||+-+ -+..-|.+.+
T Consensus 26 ~~~k~vlITGasggIG~------~la~~l~~~G 52 (286)
T 1xu9_A 26 LQGKKVIVTGASKGIGR------EMAYHLAKMG 52 (286)
T ss_dssp GTTCEEEESSCSSHHHH------HHHHHHHHTT
T ss_pred cCCCEEEEeCCCcHHHH------HHHHHHHHCC
Confidence 34667999999999844 3444454444
No 253
>1khd_A Anthranilate phosphoribosyltransferase; type 3 PRT fold, nucleotide binding fold; 1.86A {Pectobacterium carotovorum} SCOP: a.46.2.1 c.27.1.1 PDB: 1kgz_A
Probab=20.85 E-value=23 Score=33.04 Aligned_cols=55 Identities=18% Similarity=0.292 Sum_probs=32.1
Q ss_pred EEecccccccCCCccccccccchh-hhcCCCeEEEecccccccc-hhhhHhHhhhCCeeE
Q 023717 90 FVTGGIGGVHRHGEHTMDISSDLT-ELGRTPVAVVSAGIKSILD-IPRTLEYLETHGVCV 147 (278)
Q Consensus 90 FaTGGIGGVHrg~~~t~DiSaDL~-eL~rtpV~VVcaG~KsILD-i~~TLE~LET~GV~V 147 (278)
.=++|.||+.+ .||+||.=+. -++..-|-|+=-|-.++=- -.-|.+.||..||++
T Consensus 87 vD~~gTGGdg~---~tfNiSt~~A~v~Aa~Gv~VakHGnr~~ss~~~GsaDvLeaLGv~~ 143 (345)
T 1khd_A 87 ADIVGTGGDGT---NSINISTASAFVAASCGAKVAKHGNRSVCQPLAGSCDLLQAFGIRL 143 (345)
T ss_dssp EEEEECCCCSS---CBCCCHHHHHHHHHHHTCCEEEEECC---------CHHHHHTTCCT
T ss_pred eeecCCCCCCC---CccchHHHHHHHHHhCCCcEEEeCCCCCCCCcccHHHHHHhCCCCC
Confidence 33889999744 5999997332 2455545555556666655 556788888888876
No 254
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=20.84 E-value=1.6e+02 Score=26.14 Aligned_cols=85 Identities=15% Similarity=0.101 Sum_probs=51.8
Q ss_pred cccccchhh-hcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecCCCCcceeecCCCCccCcccCCHHHHHHHHHHH
Q 023717 106 MDISSDLTE-LGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVN 184 (278)
Q Consensus 106 ~DiSaDL~e-L~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~ 184 (278)
.-++.||.+ |.+..|+|-|+-+++..+ .+++...+|++||- +|.- | ++++.+++-...
T Consensus 61 v~v~~dl~~ll~~~DVVIDfT~p~a~~~---~~~~al~~G~~vVi-gTTG---~--------------s~~~~~~L~~aa 119 (272)
T 4f3y_A 61 VALTDDIERVCAEADYLIDFTLPEGTLV---HLDAALRHDVKLVI-GTTG---F--------------SEPQKAQLRAAG 119 (272)
T ss_dssp CBCBCCHHHHHHHCSEEEECSCHHHHHH---HHHHHHHHTCEEEE-CCCC---C--------------CHHHHHHHHHHT
T ss_pred ceecCCHHHHhcCCCEEEEcCCHHHHHH---HHHHHHHcCCCEEE-ECCC---C--------------CHHHHHHHHHHh
Confidence 356678877 567889999998887653 56677889999995 4421 1 344444444443
Q ss_pred HhcCCCCeEEEEeCCCccCCCChHHHHHHHHHHHH
Q 023717 185 MKLKLGSGLVIGVPIPREHAASGRVIESAIQSALR 219 (278)
Q Consensus 185 ~~l~l~~g~lvanPiP~e~~~~~~~i~~~i~~Al~ 219 (278)
+ ..++ |--| .+++--..+.+++++|-+
T Consensus 120 ~----~~~v-v~a~---N~s~Gv~l~~~~~~~aa~ 146 (272)
T 4f3y_A 120 E----KIAL-VFSA---NMSVGVNVTMKLLEFAAK 146 (272)
T ss_dssp T----TSEE-EECS---CCCHHHHHHHHHHHHHHH
T ss_pred c----cCCE-EEEC---CCCHHHHHHHHHHHHHHH
Confidence 3 2443 3333 566665566666555543
No 255
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=20.81 E-value=36 Score=30.14 Aligned_cols=36 Identities=17% Similarity=0.279 Sum_probs=31.3
Q ss_pred hcCCCeEEEecccccccchhhhHhHhhhCCeeEEee
Q 023717 115 LGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAY 150 (278)
Q Consensus 115 L~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy 150 (278)
++..-+.||-++.-++-++.++++.|+..|++++|+
T Consensus 224 ~aD~vllVv~~~~~~~~~~~~~~~~l~~~g~~~~Gv 259 (286)
T 3la6_A 224 HVGTTLMVARYAVNTLKEVETSLSRFEQNGIPVKGV 259 (286)
T ss_dssp TCSEEEEEEETTTSBHHHHHHHHHHHHHTTCCCCEE
T ss_pred HCCeEEEEEeCCCCcHHHHHHHHHHHHhCCCCEEEE
Confidence 345568888889999999999999999999999886
No 256
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=20.81 E-value=52 Score=30.10 Aligned_cols=68 Identities=15% Similarity=0.096 Sum_probs=41.5
Q ss_pred CCCChHHHHHHHHH---HHHHHHHcCCCCccCC---hHHHHHHH-HHhCCccHHHHHHHHHHHHHHHHHHHHHHHH
Q 023717 203 HAASGRVIESAIQS---ALREAREKNITGNAET---PFLLARVN-ELTGGLSLASNIALVKNNALIGAKISVALAQ 271 (278)
Q Consensus 203 ~~~~~~~i~~~i~~---Al~ea~~~gi~Gk~vT---PflL~~i~-elT~G~Sl~aNiaLl~nNa~laa~IA~~~~~ 271 (278)
.+|+.++|+++|++ |-+.|++.|..|=+++ -|||...- -.|+-++-+.-- .++|.+++..+|-.+..+
T Consensus 140 ~~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGG-slenR~r~~~eiv~aVR~ 214 (349)
T 3hgj_A 140 EPLDEAGMERILQAFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGG-SLENRMRFPLQVAQAVRE 214 (349)
T ss_dssp EECCHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSS-SHHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCc-CHHHHHHHHHHHHHHHHH
Confidence 36999999999984 5566778899987775 46665432 223222111111 145667777777666544
No 257
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=20.67 E-value=3.6e+02 Score=22.25 Aligned_cols=47 Identities=9% Similarity=0.039 Sum_probs=25.3
Q ss_pred CcccCCHHHHHHHHHH-HHhcCCCCeEEEEeC-CC---ccCCCChHHHHHHHH
Q 023717 168 PCRVDSPEDCARLIDV-NMKLKLGSGLVIGVP-IP---REHAASGRVIESAIQ 215 (278)
Q Consensus 168 ~~r~d~~~e~A~~~~~-~~~l~l~~g~lvanP-iP---~e~~~~~~~i~~~i~ 215 (278)
+.-+.+++++.+++.. ..++|- --+||.|. +. .-..++.+..++.++
T Consensus 53 ~~Dv~~~~~v~~~~~~~~~~~g~-id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 104 (247)
T 3dii_A 53 HGDVADPLTLKKFVEYAMEKLQR-IDVLVNNACRGSKGILSSLLYEEFDYILS 104 (247)
T ss_dssp ECCTTSHHHHHHHHHHHHHHHSC-CCEEEECCC-CCCCGGGTCCHHHHHHHHH
T ss_pred EeeCCCHHHHHHHHHHHHHHcCC-CCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 3456788888887764 333442 23466554 11 112456666666554
No 258
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=20.55 E-value=2.2e+02 Score=23.19 Aligned_cols=15 Identities=33% Similarity=0.437 Sum_probs=11.5
Q ss_pred CCcEEEecccccccC
Q 023717 86 GIPVFVTGGIGGVHR 100 (278)
Q Consensus 86 GI~VFaTGGIGGVHr 100 (278)
|=.+++|||-||+-+
T Consensus 3 ~k~vlITGas~gIG~ 17 (236)
T 1ooe_A 3 SGKVIVYGGKGALGS 17 (236)
T ss_dssp CEEEEEETTTSHHHH
T ss_pred CCEEEEECCCcHHHH
Confidence 446899999999844
No 259
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=20.41 E-value=94 Score=23.10 Aligned_cols=26 Identities=27% Similarity=0.480 Sum_probs=19.5
Q ss_pred CcccEEEEEcCceeecCCHHHHHH-HHh
Q 023717 22 AVPATIAILEGLPCVGLSTEELER-LAK 48 (278)
Q Consensus 22 avPATIaii~G~i~VGl~~~el~~-la~ 48 (278)
-||- |-|-||.+.+|-+.+||+. |++
T Consensus 55 tVP~-I~i~Dg~~l~~~~~~el~~~L~e 81 (92)
T 2lqo_A 55 TVPT-VKFADGSTLTNPSADEVKAKLVK 81 (92)
T ss_dssp CSCE-EEETTSCEEESCCHHHHHHHHHH
T ss_pred EeCE-EEEeCCEEEeCCCHHHHHHHHHH
Confidence 5894 5555999999999999853 443
No 260
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=20.40 E-value=27 Score=32.29 Aligned_cols=62 Identities=18% Similarity=0.170 Sum_probs=41.2
Q ss_pred CCCChHHHHHHHHH---HHHHHHHcCCCCccCCh---HHHHHH-----HHHhC--CccHHHHHHHHHHHHHHHHHHHHHH
Q 023717 203 HAASGRVIESAIQS---ALREAREKNITGNAETP---FLLARV-----NELTG--GLSLASNIALVKNNALIGAKISVAL 269 (278)
Q Consensus 203 ~~~~~~~i~~~i~~---Al~ea~~~gi~Gk~vTP---flL~~i-----~elT~--G~Sl~aNiaLl~nNa~laa~IA~~~ 269 (278)
.+|+.++|+++|++ |-+.|++.|..|=+++- |||..+ ++.|+ |-|+ +|.+++..+|-.+.
T Consensus 131 ~~mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGsl-------enR~rf~~eiv~aV 203 (343)
T 3kru_A 131 RELSVEEIKSIVKAFGEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSI-------ENRARFLIEVIDEV 203 (343)
T ss_dssp EECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSH-------HHHTHHHHHHHHHH
T ss_pred hhcCHHHHHHHHHHHHHHHhhccccCCceEEEecccchhHHHhhcccccccchhhccch-------HhHHHHHHHHHHHH
Confidence 46999999999984 55667788999999884 455433 33444 3354 45666666666665
Q ss_pred HH
Q 023717 270 AQ 271 (278)
Q Consensus 270 ~~ 271 (278)
.+
T Consensus 204 r~ 205 (343)
T 3kru_A 204 RK 205 (343)
T ss_dssp HH
T ss_pred Hh
Confidence 43
No 261
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=20.38 E-value=38 Score=25.57 Aligned_cols=104 Identities=8% Similarity=0.077 Sum_probs=51.8
Q ss_pred hhcCCCeEEE-----ecc--ccccc-chhhhHhHh-hhCCeeEEeecCCCCc----ceeecCCCCccCcccCC---HHHH
Q 023717 114 ELGRTPVAVV-----SAG--IKSIL-DIPRTLEYL-ETHGVCVAAYKTNEFP----AFFTETSGSKVPCRVDS---PEDC 177 (278)
Q Consensus 114 eL~rtpV~VV-----caG--~KsIL-Di~~TLE~L-ET~GV~V~gy~t~~fP----aFy~~~Sg~~~~~r~d~---~~e~ 177 (278)
++..-||+|. |.. ++..+ .+.+-.+.+ ...||.|++...|+-+ .|. ..-+++.|.-.|. ..++
T Consensus 30 ~~~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~ 108 (150)
T 3fw2_A 30 AFKQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDKQQWKDAI-KRDTLDWEQVCDFGGLNSEV 108 (150)
T ss_dssp TTTTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHH-HHTTCCSEEECCSCGGGCHH
T ss_pred hhCCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHH-HHhCCCceEEEcCcccchHH
Confidence 3444455554 555 55443 233333444 5578999999866433 222 2334444443333 1244
Q ss_pred HHHHHHHHhcCCCCeEEE-EeCCCccCCCChHHHHHHHHHHHHHH
Q 023717 178 ARLIDVNMKLKLGSGLVI-GVPIPREHAASGRVIESAIQSALREA 221 (278)
Q Consensus 178 A~~~~~~~~l~l~~g~lv-anPiP~e~~~~~~~i~~~i~~Al~ea 221 (278)
++.+.. .++|.-+|| .+-.-....++.+++++.|++.+++|
T Consensus 109 ~~~~~v---~~~P~~~lid~~G~i~~~~~~~~~l~~~l~~ll~~a 150 (150)
T 3fw2_A 109 AKQYSI---YKIPANILLSSDGKILAKNLRGEELKKKIENIVEEA 150 (150)
T ss_dssp HHHTTC---CSSSEEEEECTTSBEEEESCCHHHHHHHHHHHHHHC
T ss_pred HHHcCC---CccCeEEEECCCCEEEEccCCHHHHHHHHHHHHhcC
Confidence 432221 234444444 11112222348888999998888763
No 262
>3ks9_A Mglur1, metabotropic glutamate receptor 1; glutamate receptors, dimerization, glutamic acid BIN structural genomics, structural genomics consortium; HET: Z99 NAG; 1.90A {Homo sapiens} SCOP: c.93.1.1 PDB: 1ewk_A* 1ewt_A* 1ewv_A 1isr_A* 1iss_A* 3lmk_A*
Probab=20.36 E-value=5.2e+02 Score=23.98 Aligned_cols=75 Identities=12% Similarity=0.161 Sum_probs=43.0
Q ss_pred hHhHhhhCCeeEEeecC-C-------CCcceeecCCCCccCcccCCHHHHHHHHHHHHhcCCCCeEEEEeCCCccCCCCh
Q 023717 136 TLEYLETHGVCVAAYKT-N-------EFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASG 207 (278)
Q Consensus 136 TLE~LET~GV~V~gy~t-~-------~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~~~l~l~~g~lvanPiP~e~~~~~ 207 (278)
....|+..+||.++|+. + .||-||.-. -.+..+...+++--..+|+..--+|.. |+
T Consensus 144 va~i~~~~~iP~Is~~a~~~~lsd~~~~p~~frt~--------psd~~~~~ai~~ll~~fgw~~V~li~~--------dd 207 (496)
T 3ks9_A 144 VQNLLQLFDIPQIAYSATSIDLSDKTLYKYFLRVV--------PSDTLQARAMLDIVKRYNWTYVSAVHT--------EG 207 (496)
T ss_dssp HHHHHGGGTCCEEESSCCCGGGGCTTTCTTEEESS--------CCTHHHHHHHHHHHHHTTCCEEEEEEE--------SS
T ss_pred HHHHHhhcceeEECCCcCCccccCccCCCceEEec--------CChHHHHHHHHHHHHHcCCcEEEEEEe--------cc
Confidence 45678899999999973 2 477776322 123344444444445678776555542 22
Q ss_pred HHHHHHHHHHHHHHHHcCC
Q 023717 208 RVIESAIQSALREAREKNI 226 (278)
Q Consensus 208 ~~i~~~i~~Al~ea~~~gi 226 (278)
+.=+..++.-.+++++.|+
T Consensus 208 ~~G~~~~~~~~~~~~~~Gi 226 (496)
T 3ks9_A 208 NYGESGMDAFKELAAQEGL 226 (496)
T ss_dssp HHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHcCc
Confidence 2334444544555666676
No 263
>2woo_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; 3.01A {Schizosaccharomyces pombe}
Probab=20.21 E-value=41 Score=30.17 Aligned_cols=32 Identities=16% Similarity=0.169 Sum_probs=26.7
Q ss_pred eEEEecccccccchhhhHhHhhhCCeeEEeec
Q 023717 120 VAVVSAGIKSILDIPRTLEYLETHGVCVAAYK 151 (278)
Q Consensus 120 V~VVcaG~KsILDi~~TLE~LET~GV~V~gy~ 151 (278)
++|+..+.-++-+..+++++|+..|+||.|.=
T Consensus 225 vlV~~pe~~~i~ea~~~~~~L~~~gi~v~gvV 256 (329)
T 2woo_A 225 VCVCISEFLSLYETERMIQELTSYEIDTHNIV 256 (329)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred EEEeCCCcchHHHHHHHHHHHHHCCCCCCEEE
Confidence 44555566689999999999999999999983
No 264
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=20.19 E-value=1.4e+02 Score=26.46 Aligned_cols=69 Identities=10% Similarity=0.118 Sum_probs=41.5
Q ss_pred HHHHHHHHCCCcEEEeccccccc-----CCCccccccccch----hhhc--CCCeEEEecccccccchhhhHhHhhhCCe
Q 023717 77 ATMFFASMVGIPVFVTGGIGGVH-----RHGEHTMDISSDL----TELG--RTPVAVVSAGIKSILDIPRTLEYLETHGV 145 (278)
Q Consensus 77 aTm~lA~~aGI~VFaTGGIGGVH-----rg~~~t~DiSaDL----~eL~--rtpV~VVcaG~KsILDi~~TLE~LET~GV 145 (278)
.+..+|+..|.+|++|..---=. .|+...+|.+.|+ .++. .-.+++-|+|....+ ...++.|...|.
T Consensus 166 ~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~g~Dvv~d~~g~~~~~--~~~~~~l~~~G~ 243 (346)
T 3fbg_A 166 IATQIAKAYGLRVITTASRNETIEWTKKMGADIVLNHKESLLNQFKTQGIELVDYVFCTFNTDMYY--DDMIQLVKPRGH 243 (346)
T ss_dssp HHHHHHHHTTCEEEEECCSHHHHHHHHHHTCSEEECTTSCHHHHHHHHTCCCEEEEEESSCHHHHH--HHHHHHEEEEEE
T ss_pred HHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEECCccHHHHHHHhCCCCccEEEECCCchHHH--HHHHHHhccCCE
Confidence 45667888999999997621000 1344455554443 3342 245788888875433 466788888886
Q ss_pred eE
Q 023717 146 CV 147 (278)
Q Consensus 146 ~V 147 (278)
-|
T Consensus 244 iv 245 (346)
T 3fbg_A 244 IA 245 (346)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 265
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=20.18 E-value=81 Score=26.40 Aligned_cols=13 Identities=15% Similarity=-0.276 Sum_probs=10.6
Q ss_pred cEEEecccccccC
Q 023717 88 PVFVTGGIGGVHR 100 (278)
Q Consensus 88 ~VFaTGGIGGVHr 100 (278)
.+++|||-||+-+
T Consensus 3 ~vlVTGas~gIG~ 15 (254)
T 1zmt_A 3 TAIVTNVKHFGGM 15 (254)
T ss_dssp EEEESSTTSTTHH
T ss_pred EEEEeCCCchHHH
Confidence 3899999999844
No 266
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=20.07 E-value=42 Score=32.76 Aligned_cols=67 Identities=21% Similarity=0.154 Sum_probs=0.0
Q ss_pred HHHHHHHHHCCCcEE-----EecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEee
Q 023717 76 SATMFFASMVGIPVF-----VTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAY 150 (278)
Q Consensus 76 aaTm~lA~~aGI~VF-----aTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy 150 (278)
......-+.+||++| |.-.+.-..+.... ..+.-+..|- .+..||+.|.+|+ -|-|+.|||||+-|
T Consensus 384 ~~~~~~L~~aGIp~f~spe~Av~a~~~l~~~~~~--~~~~~~~~l~-~~~~vin~Gl~~f------~~~l~~~~~~vv~~ 454 (480)
T 3dmy_A 384 SQQIATLEDAGIAVVSSLPEATLLAAALIHPLSP--AAQQHTPSLL-ENVAVINIGLRSF------ALELQSASKPVVHY 454 (480)
T ss_dssp HHHHHHHHHTTCEECSSHHHHHHHHHHHTSCCC-------CCCHHH-HCCCEEECSCHHH------HHHHHHTTCCEEEE
T ss_pred HHHHHHHHhCCCcccCCHHHHHHHHHHHHhcccC--CchhHHHHhc-CCCeEEEeChHHH------HHHHHHcCCCEEee
Q ss_pred c
Q 023717 151 K 151 (278)
Q Consensus 151 ~ 151 (278)
.
T Consensus 455 ~ 455 (480)
T 3dmy_A 455 Q 455 (480)
T ss_dssp C
T ss_pred c
No 267
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=20.03 E-value=44 Score=29.78 Aligned_cols=32 Identities=22% Similarity=0.174 Sum_probs=28.5
Q ss_pred eEEEecccccccchhhhHhHhhhCCeeEEeec
Q 023717 120 VAVVSAGIKSILDIPRTLEYLETHGVCVAAYK 151 (278)
Q Consensus 120 V~VVcaG~KsILDi~~TLE~LET~GV~V~gy~ 151 (278)
+.|+..+.-++-+..+++++|+..|+||.|.=
T Consensus 226 vlV~~p~~~~~~~~~~~~~~l~~~gi~v~gvV 257 (324)
T 3zq6_A 226 KMVVIPEEMSIYESERAMKALEKYSIHADGVI 257 (324)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEeCCcccHHHHHHHHHHHHHHCCCCccEEE
Confidence 56666788999999999999999999999984
No 268
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=20.00 E-value=3.1e+02 Score=22.98 Aligned_cols=104 Identities=17% Similarity=0.168 Sum_probs=52.2
Q ss_pred CCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecCCCCcceeecCCC
Q 023717 85 VGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSG 164 (278)
Q Consensus 85 aGI~VFaTGGIGGVHrg~~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t~~fPaFy~~~Sg 164 (278)
.|=.|++|||-||+-+ -+..-|.+-+- .|++++- ..-=......+.++..|..+..+
T Consensus 28 ~~k~vlITGas~gIG~------~la~~l~~~G~-~V~~~~r--~~~~~~~~~~~~~~~~~~~~~~~-------------- 84 (271)
T 4iin_A 28 TGKNVLITGASKGIGA------EIAKTLASMGL-KVWINYR--SNAEVADALKNELEEKGYKAAVI-------------- 84 (271)
T ss_dssp SCCEEEETTCSSHHHH------HHHHHHHHTTC-EEEEEES--SCHHHHHHHHHHHHHTTCCEEEE--------------
T ss_pred CCCEEEEECCCcHHHH------HHHHHHHHCCC-EEEEEeC--CCHHHHHHHHHHHHhcCCceEEE--------------
Confidence 3556999999999844 44444444332 2333332 11111233445566666444322
Q ss_pred CccCcccCCHHHHHHHHHHHH-hcCCCCeEEEEeC-CC---ccCCCChHHHHHHHH
Q 023717 165 SKVPCRVDSPEDCARLIDVNM-KLKLGSGLVIGVP-IP---REHAASGRVIESAIQ 215 (278)
Q Consensus 165 ~~~~~r~d~~~e~A~~~~~~~-~l~l~~g~lvanP-iP---~e~~~~~~~i~~~i~ 215 (278)
+..+.+++++.+++..-. .++ +--+||.|. +. .-...+.+.+++.++
T Consensus 85 ---~~D~~~~~~v~~~~~~~~~~~g-~id~li~nAg~~~~~~~~~~~~~~~~~~~~ 136 (271)
T 4iin_A 85 ---KFDAASESDFIEAIQTIVQSDG-GLSYLVNNAGVVRDKLAIKMKTEDFHHVID 136 (271)
T ss_dssp ---ECCTTCHHHHHHHHHHHHHHHS-SCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred ---ECCCCCHHHHHHHHHHHHHhcC-CCCEEEECCCcCCCcccccCCHHHHHHHHH
Confidence 234556777777766432 233 223455552 11 122456666666554
Done!