Query 023723
Match_columns 278
No_of_seqs 189 out of 1512
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 11:42:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023723.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023723hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qv2_A 5-cytosine DNA methyltr 100.0 1.8E-60 6E-65 435.7 21.6 269 4-277 2-325 (327)
2 3ubt_Y Modification methylase 100.0 7.7E-60 2.6E-64 431.5 16.2 255 13-275 1-322 (331)
3 4h0n_A DNMT2; SAH binding, tra 100.0 2.8E-58 9.5E-63 422.3 19.5 258 12-275 3-333 (333)
4 2c7p_A Modification methylase 100.0 4.3E-57 1.5E-61 413.6 23.2 263 3-276 2-321 (327)
5 3g7u_A Cytosine-specific methy 100.0 5.8E-57 2E-61 419.9 18.7 253 12-276 2-366 (376)
6 1g55_A DNA cytosine methyltran 100.0 3.3E-57 1.1E-61 417.3 16.3 258 12-275 2-343 (343)
7 4ft4_B DNA (cytosine-5)-methyl 100.0 1.9E-55 6.5E-60 444.3 16.5 260 8-275 208-739 (784)
8 2qrv_A DNA (cytosine-5)-methyl 100.0 2.7E-51 9.1E-56 369.9 20.7 257 4-276 8-291 (295)
9 4dkj_A Cytosine-specific methy 100.0 7.3E-52 2.5E-56 387.7 11.3 260 8-276 6-391 (403)
10 3swr_A DNA (cytosine-5)-methyl 100.0 7.6E-51 2.6E-55 413.9 19.4 263 5-276 533-997 (1002)
11 3av4_A DNA (cytosine-5)-methyl 100.0 2.5E-50 8.6E-55 418.4 17.6 260 9-276 848-1307(1330)
12 3me5_A Cytosine-specific methy 100.0 5.2E-48 1.8E-52 368.5 19.1 253 10-275 86-454 (482)
13 2qrv_B DNA (cytosine-5)-methyl 99.9 1.5E-23 5.3E-28 180.3 6.4 122 6-158 27-172 (230)
14 2pv0_B DNA (cytosine-5)-methyl 99.9 7.8E-23 2.7E-27 187.4 6.8 119 9-158 186-328 (386)
15 2igt_A SAM dependent methyltra 98.0 2.2E-06 7.4E-11 77.9 3.8 106 12-120 154-271 (332)
16 3c0k_A UPF0064 protein YCCW; P 97.9 8.3E-06 2.8E-10 75.6 5.5 106 12-120 221-338 (396)
17 1wy7_A Hypothetical protein PH 97.7 0.0001 3.5E-09 61.2 8.5 73 11-89 49-126 (207)
18 3k6r_A Putative transferase PH 97.7 2.5E-05 8.6E-10 69.2 4.8 70 12-85 126-202 (278)
19 2frn_A Hypothetical protein PH 97.7 4.5E-05 1.5E-09 67.2 5.9 86 12-115 126-218 (278)
20 4dmg_A Putative uncharacterize 97.6 5.9E-05 2E-09 70.0 5.0 70 12-85 215-290 (393)
21 1ne2_A Hypothetical protein TA 97.5 0.00017 6E-09 59.5 7.0 73 11-89 51-124 (200)
22 2fpo_A Methylase YHHF; structu 97.5 6.7E-05 2.3E-09 62.7 4.4 71 12-84 55-131 (202)
23 3gdh_A Trimethylguanosine synt 97.5 0.00012 4.2E-09 62.3 5.9 76 11-91 78-160 (241)
24 2ift_A Putative methylase HI07 97.4 0.00013 4.4E-09 60.8 5.1 72 12-85 54-135 (201)
25 3p9n_A Possible methyltransfer 97.4 0.00023 7.8E-09 58.4 5.9 99 11-120 44-152 (189)
26 1nv8_A HEMK protein; class I a 97.3 0.0011 3.7E-08 58.6 10.2 103 12-120 124-248 (284)
27 3lpm_A Putative methyltransfer 97.3 0.00067 2.3E-08 58.6 7.8 77 11-89 49-133 (259)
28 3ajd_A Putative methyltransfer 97.3 0.00021 7E-09 62.7 4.5 79 12-92 84-173 (274)
29 3a27_A TYW2, uncharacterized p 97.3 0.00042 1.4E-08 60.7 6.5 88 12-116 120-213 (272)
30 1ixk_A Methyltransferase; open 97.2 0.00085 2.9E-08 60.1 7.9 80 12-92 119-204 (315)
31 3v97_A Ribosomal RNA large sub 97.2 0.00027 9.1E-09 70.3 4.9 119 12-134 540-674 (703)
32 3bt7_A TRNA (uracil-5-)-methyl 97.1 0.00043 1.5E-08 63.4 5.5 42 13-57 215-256 (369)
33 2b78_A Hypothetical protein SM 97.1 0.00028 9.5E-09 65.1 4.2 76 12-89 213-299 (385)
34 2yx1_A Hypothetical protein MJ 97.1 0.00068 2.3E-08 61.3 6.5 83 11-115 195-284 (336)
35 2esr_A Methyltransferase; stru 97.1 0.00046 1.6E-08 55.7 4.7 73 11-85 31-110 (177)
36 2frx_A Hypothetical protein YE 97.1 0.0014 4.8E-08 62.3 8.4 82 11-92 117-204 (479)
37 3axs_A Probable N(2),N(2)-dime 97.0 0.00047 1.6E-08 63.9 4.7 72 12-85 53-135 (392)
38 3m6w_A RRNA methylase; rRNA me 97.0 0.00056 1.9E-08 64.7 5.1 83 11-93 101-188 (464)
39 3q87_B N6 adenine specific DNA 97.0 0.004 1.4E-07 50.2 9.2 111 12-134 24-141 (170)
40 2b9e_A NOL1/NOP2/SUN domain fa 96.9 0.00099 3.4E-08 59.7 5.8 81 12-93 103-192 (309)
41 2fhp_A Methylase, putative; al 96.9 0.00065 2.2E-08 54.9 4.1 72 11-84 44-125 (187)
42 3mti_A RRNA methylase; SAM-dep 96.9 0.00063 2.2E-08 55.2 4.0 102 11-116 22-129 (185)
43 1ws6_A Methyltransferase; stru 96.9 0.00085 2.9E-08 53.3 4.7 95 11-120 41-146 (171)
44 2as0_A Hypothetical protein PH 96.9 0.00084 2.9E-08 61.9 5.2 103 11-116 217-329 (396)
45 3m4x_A NOL1/NOP2/SUN family pr 96.9 0.00082 2.8E-08 63.5 5.1 81 11-92 105-192 (456)
46 1wxx_A TT1595, hypothetical pr 96.9 0.00039 1.3E-08 63.9 2.8 75 12-89 210-293 (382)
47 3evz_A Methyltransferase; NYSG 96.9 0.002 6.9E-08 54.1 7.0 77 11-90 55-138 (230)
48 2jjq_A Uncharacterized RNA met 96.8 0.0016 5.5E-08 60.9 6.5 68 12-85 291-363 (425)
49 1o9g_A RRNA methyltransferase; 96.7 0.0022 7.5E-08 54.9 6.1 47 11-58 51-99 (250)
50 2ozv_A Hypothetical protein AT 96.7 0.0035 1.2E-07 54.3 7.4 77 11-88 36-128 (260)
51 3fut_A Dimethyladenosine trans 96.7 0.0021 7.3E-08 56.4 5.8 68 14-84 49-119 (271)
52 2dul_A N(2),N(2)-dimethylguano 96.6 0.001 3.6E-08 61.2 3.5 44 12-57 48-92 (378)
53 2b3t_A Protein methyltransfera 96.6 0.0033 1.1E-07 54.7 6.4 77 11-90 109-191 (276)
54 1uwv_A 23S rRNA (uracil-5-)-me 96.6 0.003 1E-07 59.0 6.3 72 12-86 287-367 (433)
55 4dzr_A Protein-(glutamine-N5) 96.6 0.0021 7.1E-08 52.9 4.7 78 10-90 29-116 (215)
56 3m33_A Uncharacterized protein 96.5 0.0083 2.8E-07 50.4 8.4 105 11-134 48-159 (226)
57 2h1r_A Dimethyladenosine trans 96.5 0.0039 1.3E-07 55.3 6.4 70 11-86 42-117 (299)
58 3ll7_A Putative methyltransfer 96.5 0.0022 7.4E-08 59.7 4.5 72 12-86 94-174 (410)
59 3tma_A Methyltransferase; thum 96.4 0.004 1.4E-07 56.3 6.1 74 11-85 203-282 (354)
60 3eey_A Putative rRNA methylase 96.4 0.003 1E-07 51.6 4.9 103 12-116 23-133 (197)
61 1sqg_A SUN protein, FMU protei 96.4 0.0023 7.9E-08 59.7 4.4 81 12-93 247-333 (429)
62 2h00_A Methyltransferase 10 do 96.4 0.0066 2.3E-07 51.8 6.9 76 11-89 65-154 (254)
63 1zq9_A Probable dimethyladenos 96.4 0.0064 2.2E-07 53.5 6.9 71 11-87 28-105 (285)
64 3cgg_A SAM-dependent methyltra 96.3 0.011 3.6E-07 47.6 7.6 113 11-134 46-167 (195)
65 3grz_A L11 mtase, ribosomal pr 96.3 0.0062 2.1E-07 50.1 6.2 106 11-134 60-177 (205)
66 2yxl_A PH0851 protein, 450AA l 96.3 0.0049 1.7E-07 57.8 6.1 82 12-93 260-348 (450)
67 3ftd_A Dimethyladenosine trans 96.3 0.0074 2.5E-07 52.2 6.6 70 12-84 32-104 (249)
68 3e05_A Precorrin-6Y C5,15-meth 96.3 0.017 5.7E-07 47.5 8.5 109 11-134 40-160 (204)
69 3hm2_A Precorrin-6Y C5,15-meth 96.2 0.043 1.5E-06 43.5 10.5 93 11-120 25-126 (178)
70 1qam_A ERMC' methyltransferase 96.2 0.014 5E-07 49.9 7.9 45 11-58 30-74 (244)
71 3iv6_A Putative Zn-dependent a 96.1 0.018 6.2E-07 50.2 8.5 95 11-117 45-143 (261)
72 4fzv_A Putative methyltransfer 96.1 0.0074 2.5E-07 55.1 6.1 75 12-87 149-235 (359)
73 3h2b_A SAM-dependent methyltra 96.1 0.013 4.5E-07 47.9 7.1 97 12-120 42-140 (203)
74 2qm3_A Predicted methyltransfe 96.1 0.0084 2.9E-07 54.7 6.4 96 12-120 173-277 (373)
75 3dmg_A Probable ribosomal RNA 96.1 0.0078 2.7E-07 55.4 6.1 96 11-115 233-333 (381)
76 1yzh_A TRNA (guanine-N(7)-)-me 96.1 0.041 1.4E-06 45.6 10.0 120 12-134 42-174 (214)
77 3hnr_A Probable methyltransfer 96.0 0.03 1E-06 46.2 9.1 91 11-115 45-138 (220)
78 3gru_A Dimethyladenosine trans 96.0 0.0082 2.8E-07 53.4 5.6 70 12-85 51-124 (295)
79 3tqs_A Ribosomal RNA small sub 96.0 0.0084 2.9E-07 52.1 5.4 44 12-58 30-73 (255)
80 3njr_A Precorrin-6Y methylase; 95.9 0.025 8.5E-07 46.9 8.1 104 12-134 56-172 (204)
81 2oyr_A UPF0341 protein YHIQ; a 95.9 0.012 4.2E-07 51.2 6.3 40 13-55 90-129 (258)
82 1o54_A SAM-dependent O-methylt 95.9 0.021 7.3E-07 49.4 7.8 105 12-134 113-231 (277)
83 3g5l_A Putative S-adenosylmeth 95.9 0.023 7.7E-07 48.2 7.7 97 11-120 44-144 (253)
84 2yxd_A Probable cobalt-precorr 95.9 0.017 5.9E-07 45.9 6.6 69 11-84 35-109 (183)
85 1dus_A MJ0882; hypothetical pr 95.9 0.015 5.1E-07 46.6 6.2 96 11-120 52-156 (194)
86 2f8l_A Hypothetical protein LM 95.8 0.0048 1.6E-07 55.6 3.5 75 11-87 130-213 (344)
87 4dcm_A Ribosomal RNA large sub 95.8 0.012 4.1E-07 54.0 6.0 95 13-116 224-328 (375)
88 3ldg_A Putative uncharacterize 95.7 0.008 2.7E-07 55.4 4.6 95 12-114 195-333 (384)
89 3mb5_A SAM-dependent methyltra 95.7 0.041 1.4E-06 46.7 8.8 87 11-115 93-187 (255)
90 3ggd_A SAM-dependent methyltra 95.7 0.028 9.5E-07 47.4 7.6 99 11-120 56-163 (245)
91 3tm4_A TRNA (guanine N2-)-meth 95.7 0.011 3.9E-07 53.9 5.5 73 11-85 217-296 (373)
92 2vdv_E TRNA (guanine-N(7)-)-me 95.7 0.031 1.1E-06 47.6 7.9 102 11-115 49-166 (246)
93 1m6y_A S-adenosyl-methyltransf 95.7 0.011 3.7E-07 52.7 5.1 75 12-87 27-110 (301)
94 1inl_A Spermidine synthase; be 95.7 0.013 4.4E-07 51.8 5.5 102 12-120 91-204 (296)
95 3jwh_A HEN1; methyltransferase 95.7 0.036 1.2E-06 45.9 8.0 99 11-120 29-139 (217)
96 3m70_A Tellurite resistance pr 95.6 0.016 5.5E-07 50.3 5.7 93 11-116 120-217 (286)
97 3i9f_A Putative type 11 methyl 95.5 0.029 9.8E-07 44.4 6.7 93 11-120 17-112 (170)
98 2zig_A TTHA0409, putative modi 95.5 0.013 4.5E-07 51.7 5.1 44 11-57 235-278 (297)
99 3e23_A Uncharacterized protein 95.5 0.036 1.2E-06 45.6 7.3 96 12-120 44-140 (211)
100 3lbf_A Protein-L-isoaspartate 95.5 0.031 1.1E-06 45.9 6.9 73 11-87 77-155 (210)
101 1iy9_A Spermidine synthase; ro 95.4 0.018 6E-07 50.4 5.5 101 11-120 75-188 (275)
102 3duw_A OMT, O-methyltransferas 95.4 0.033 1.1E-06 46.3 7.0 96 12-120 59-166 (223)
103 3bkw_A MLL3908 protein, S-aden 95.4 0.039 1.3E-06 46.1 7.3 97 11-120 43-143 (243)
104 2yvl_A TRMI protein, hypotheti 95.4 0.064 2.2E-06 45.1 8.7 91 11-120 91-189 (248)
105 1ve3_A Hypothetical protein PH 95.4 0.032 1.1E-06 46.2 6.7 97 12-120 39-141 (227)
106 2pxx_A Uncharacterized protein 95.4 0.022 7.6E-07 46.6 5.6 72 11-85 42-117 (215)
107 2fca_A TRNA (guanine-N(7)-)-me 95.3 0.1 3.4E-06 43.4 9.6 107 11-120 38-152 (213)
108 3pfg_A N-methyltransferase; N, 95.3 0.035 1.2E-06 47.3 6.8 97 12-120 51-150 (263)
109 3e8s_A Putative SAM dependent 95.2 0.045 1.5E-06 45.0 7.2 95 12-120 53-151 (227)
110 3ldu_A Putative methylase; str 95.2 0.014 4.7E-07 53.8 4.3 72 11-84 195-310 (385)
111 1l3i_A Precorrin-6Y methyltran 95.2 0.035 1.2E-06 44.3 6.2 107 11-134 33-152 (192)
112 3k0b_A Predicted N6-adenine-sp 95.2 0.018 6E-07 53.2 4.8 72 12-85 202-317 (393)
113 1g8a_A Fibrillarin-like PRE-rR 95.1 0.041 1.4E-06 45.9 6.7 91 12-115 74-171 (227)
114 1mjf_A Spermidine synthase; sp 95.1 0.045 1.5E-06 47.8 7.2 100 12-120 76-192 (281)
115 1yb2_A Hypothetical protein TA 95.1 0.062 2.1E-06 46.5 7.9 105 12-134 111-229 (275)
116 3ofk_A Nodulation protein S; N 95.0 0.046 1.6E-06 45.0 6.6 96 11-120 51-153 (216)
117 3lcc_A Putative methyl chlorid 95.0 0.033 1.1E-06 46.7 5.7 96 12-120 67-171 (235)
118 1vbf_A 231AA long hypothetical 94.9 0.052 1.8E-06 45.2 6.8 73 11-87 70-146 (231)
119 2gpy_A O-methyltransferase; st 94.9 0.035 1.2E-06 46.6 5.7 95 12-120 55-159 (233)
120 2okc_A Type I restriction enzy 94.9 0.022 7.7E-07 53.2 4.9 78 11-90 171-268 (445)
121 3tfw_A Putative O-methyltransf 94.9 0.058 2E-06 46.0 7.1 96 12-120 64-169 (248)
122 2p35_A Trans-aconitate 2-methy 94.9 0.044 1.5E-06 46.3 6.2 95 11-120 33-131 (259)
123 4htf_A S-adenosylmethionine-de 94.9 0.038 1.3E-06 47.8 5.9 96 12-120 69-172 (285)
124 3jwg_A HEN1, methyltransferase 94.8 0.073 2.5E-06 43.9 7.2 99 11-120 29-139 (219)
125 2qfm_A Spermine synthase; sper 94.7 0.033 1.1E-06 50.9 5.2 47 11-59 188-234 (364)
126 2pwy_A TRNA (adenine-N(1)-)-me 94.7 0.092 3.1E-06 44.4 7.8 106 11-134 96-216 (258)
127 3khk_A Type I restriction-modi 94.6 0.047 1.6E-06 52.5 6.4 74 13-86 246-340 (544)
128 2nxc_A L11 mtase, ribosomal pr 94.6 0.028 9.7E-07 48.3 4.4 105 12-134 121-236 (254)
129 3l8d_A Methyltransferase; stru 94.6 0.071 2.4E-06 44.5 6.8 96 11-120 53-152 (242)
130 2gs9_A Hypothetical protein TT 94.6 0.077 2.6E-06 43.4 6.9 94 11-120 36-131 (211)
131 3ntv_A MW1564 protein; rossman 94.6 0.068 2.3E-06 45.0 6.7 95 12-120 72-175 (232)
132 3s1s_A Restriction endonucleas 94.6 0.03 1E-06 56.2 5.0 75 11-85 321-409 (878)
133 2ar0_A M.ecoki, type I restric 94.6 0.065 2.2E-06 51.5 7.2 80 11-90 169-276 (541)
134 3dtn_A Putative methyltransfer 94.5 0.089 3E-06 43.8 7.2 99 10-120 43-148 (234)
135 3bxo_A N,N-dimethyltransferase 94.5 0.069 2.4E-06 44.4 6.5 99 11-120 40-140 (239)
136 2ipx_A RRNA 2'-O-methyltransfe 94.5 0.056 1.9E-06 45.3 5.9 96 12-120 78-181 (233)
137 3adn_A Spermidine synthase; am 94.5 0.057 1.9E-06 47.7 6.1 73 12-85 84-167 (294)
138 3lkd_A Type I restriction-modi 94.5 0.031 1E-06 53.8 4.6 77 10-86 220-308 (542)
139 2b25_A Hypothetical protein; s 94.4 0.1 3.4E-06 46.5 7.6 45 12-57 106-151 (336)
140 2oo3_A Protein involved in cat 94.4 0.027 9.3E-07 49.6 3.7 69 13-84 93-168 (283)
141 3uzu_A Ribosomal RNA small sub 94.3 0.038 1.3E-06 48.5 4.6 44 11-56 42-88 (279)
142 1g6q_1 HnRNP arginine N-methyl 94.3 0.082 2.8E-06 47.2 6.9 97 12-119 39-142 (328)
143 3q7e_A Protein arginine N-meth 94.3 0.1 3.5E-06 47.0 7.6 96 12-118 67-169 (349)
144 3ccf_A Cyclopropane-fatty-acyl 94.3 0.12 4.1E-06 44.5 7.7 95 11-120 57-153 (279)
145 3dlc_A Putative S-adenosyl-L-m 94.3 0.081 2.8E-06 43.2 6.3 89 14-115 46-141 (219)
146 3r0q_C Probable protein argini 94.3 0.075 2.6E-06 48.4 6.7 96 10-117 62-164 (376)
147 1zx0_A Guanidinoacetate N-meth 94.3 0.074 2.5E-06 44.7 6.2 101 11-119 60-167 (236)
148 3tr6_A O-methyltransferase; ce 94.3 0.053 1.8E-06 45.0 5.2 96 12-120 65-173 (225)
149 4gek_A TRNA (CMO5U34)-methyltr 94.2 0.099 3.4E-06 45.2 7.0 98 12-120 71-178 (261)
150 2pt6_A Spermidine synthase; tr 94.2 0.068 2.3E-06 47.8 6.1 102 12-120 117-229 (321)
151 3bzb_A Uncharacterized protein 94.2 0.05 1.7E-06 47.4 5.1 44 11-56 79-123 (281)
152 1i1n_A Protein-L-isoaspartate 94.1 0.092 3.1E-06 43.6 6.4 74 11-86 77-162 (226)
153 2avn_A Ubiquinone/menaquinone 94.1 0.12 4.2E-06 44.0 7.3 97 11-120 54-151 (260)
154 2avd_A Catechol-O-methyltransf 94.1 0.073 2.5E-06 44.2 5.7 96 12-120 70-178 (229)
155 3dxy_A TRNA (guanine-N(7)-)-me 94.0 0.12 4.1E-06 43.3 6.9 107 11-120 34-149 (218)
156 1ri5_A MRNA capping enzyme; me 94.0 0.075 2.6E-06 45.8 5.7 102 11-120 64-173 (298)
157 2r6z_A UPF0341 protein in RSP 94.0 0.04 1.4E-06 47.8 3.9 72 12-86 84-172 (258)
158 4hc4_A Protein arginine N-meth 93.9 0.084 2.9E-06 48.4 6.2 65 13-81 85-155 (376)
159 2ih2_A Modification methylase 93.9 0.02 7E-07 52.5 2.0 72 12-90 40-113 (421)
160 2xvm_A Tellurite resistance pr 93.9 0.099 3.4E-06 42.1 5.9 96 12-120 33-136 (199)
161 3sm3_A SAM-dependent methyltra 93.8 0.12 4.3E-06 42.6 6.7 99 11-120 30-141 (235)
162 1qyr_A KSGA, high level kasuga 93.8 0.052 1.8E-06 46.9 4.3 70 12-84 22-99 (252)
163 2kw5_A SLR1183 protein; struct 93.7 0.13 4.5E-06 41.7 6.5 93 14-120 32-130 (202)
164 2pbf_A Protein-L-isoaspartate 93.7 0.11 3.9E-06 43.0 6.1 76 11-86 80-173 (227)
165 3kr9_A SAM-dependent methyltra 93.7 0.11 3.8E-06 44.2 6.0 106 12-134 16-135 (225)
166 3kkz_A Uncharacterized protein 93.6 0.13 4.6E-06 43.8 6.6 96 11-120 46-150 (267)
167 3lec_A NADB-rossmann superfami 93.6 0.11 3.9E-06 44.2 6.1 46 12-58 22-67 (230)
168 3cc8_A Putative methyltransfer 93.6 0.1 3.5E-06 42.9 5.7 96 11-120 32-129 (230)
169 3gnl_A Uncharacterized protein 93.6 0.11 3.8E-06 44.7 6.0 45 12-57 22-66 (244)
170 3u81_A Catechol O-methyltransf 93.6 0.083 2.8E-06 43.9 5.1 46 12-57 59-104 (221)
171 2pjd_A Ribosomal RNA small sub 93.6 0.034 1.2E-06 50.0 2.8 95 12-115 197-296 (343)
172 2ex4_A Adrenal gland protein A 93.6 0.087 3E-06 44.3 5.3 98 11-120 79-185 (241)
173 1i9g_A Hypothetical protein RV 93.6 0.2 6.8E-06 43.0 7.7 87 12-115 100-196 (280)
174 3dh0_A SAM dependent methyltra 93.5 0.086 2.9E-06 43.4 5.1 99 11-120 37-143 (219)
175 3uwp_A Histone-lysine N-methyl 93.5 0.089 3E-06 49.0 5.6 97 11-120 173-288 (438)
176 1y8c_A S-adenosylmethionine-de 93.5 0.12 4.1E-06 43.0 6.0 98 11-120 37-141 (246)
177 3opn_A Putative hemolysin; str 93.4 0.17 5.7E-06 42.9 6.9 46 11-58 37-82 (232)
178 3lcv_B Sisomicin-gentamicin re 93.4 0.027 9.2E-07 49.3 1.8 97 12-121 133-235 (281)
179 1dl5_A Protein-L-isoaspartate 93.4 0.15 5E-06 45.2 6.8 77 11-88 75-157 (317)
180 2yqz_A Hypothetical protein TT 93.4 0.13 4.5E-06 43.4 6.1 93 11-117 39-136 (263)
181 2o07_A Spermidine synthase; st 93.3 0.06 2.1E-06 47.7 4.0 102 12-120 96-208 (304)
182 3bwc_A Spermidine synthase; SA 93.3 0.11 3.8E-06 45.9 5.6 46 11-57 95-140 (304)
183 1p91_A Ribosomal RNA large sub 93.2 0.26 8.8E-06 42.0 7.8 84 11-115 85-171 (269)
184 3ou2_A SAM-dependent methyltra 93.1 0.1 3.4E-06 42.7 4.8 95 12-120 47-146 (218)
185 2gb4_A Thiopurine S-methyltran 93.1 0.16 5.3E-06 43.7 6.2 44 11-57 68-111 (252)
186 1jg1_A PIMT;, protein-L-isoasp 93.0 0.12 4.1E-06 43.4 5.2 72 12-86 92-169 (235)
187 1kpg_A CFA synthase;, cyclopro 93.0 0.41 1.4E-05 41.1 8.8 93 11-115 64-161 (287)
188 2i7c_A Spermidine synthase; tr 92.9 0.17 5.8E-06 44.2 6.3 74 11-85 78-161 (283)
189 2p7i_A Hypothetical protein; p 92.9 0.14 4.9E-06 42.5 5.6 95 11-120 42-140 (250)
190 2fk8_A Methoxy mycolic acid sy 92.9 0.33 1.1E-05 42.4 8.2 93 11-115 90-187 (318)
191 1pjz_A Thiopurine S-methyltran 92.8 0.12 4.1E-06 42.5 4.9 95 11-116 22-134 (203)
192 1xtp_A LMAJ004091AAA; SGPP, st 92.7 0.12 4.3E-06 43.3 5.0 94 11-115 93-190 (254)
193 3g5t_A Trans-aconitate 3-methy 92.7 0.25 8.6E-06 42.9 7.1 92 11-115 36-142 (299)
194 2yxe_A Protein-L-isoaspartate 92.7 0.23 7.7E-06 40.7 6.4 76 11-87 77-158 (215)
195 3f4k_A Putative methyltransfer 92.7 0.23 7.8E-06 41.8 6.6 95 12-120 47-150 (257)
196 1vl5_A Unknown conserved prote 92.5 0.23 7.8E-06 42.1 6.5 96 11-120 37-140 (260)
197 3fzg_A 16S rRNA methylase; met 92.5 0.21 7.1E-06 41.6 5.9 96 12-120 50-150 (200)
198 1xxl_A YCGJ protein; structura 92.4 0.24 8.2E-06 41.5 6.3 96 11-120 21-124 (239)
199 4azs_A Methyltransferase WBDD; 92.4 0.21 7.3E-06 48.0 6.7 70 10-82 65-141 (569)
200 2fyt_A Protein arginine N-meth 92.3 0.18 6.3E-06 45.2 5.8 69 11-83 64-139 (340)
201 3v97_A Ribosomal RNA large sub 92.3 0.11 3.7E-06 51.5 4.6 48 38-85 258-313 (703)
202 1uir_A Polyamine aminopropyltr 92.2 0.16 5.6E-06 45.0 5.3 73 12-85 78-161 (314)
203 1sui_A Caffeoyl-COA O-methyltr 92.1 0.22 7.5E-06 42.4 5.8 96 12-120 80-189 (247)
204 2b2c_A Spermidine synthase; be 92.0 0.2 6.9E-06 44.6 5.6 102 12-120 109-221 (314)
205 3hp7_A Hemolysin, putative; st 92.0 0.35 1.2E-05 42.6 7.1 90 11-115 85-178 (291)
206 3b3j_A Histone-arginine methyl 91.9 0.19 6.6E-06 47.4 5.7 69 11-84 158-233 (480)
207 3g2m_A PCZA361.24; SAM-depende 91.9 0.16 5.4E-06 44.2 4.7 95 13-120 84-189 (299)
208 2i62_A Nicotinamide N-methyltr 91.8 0.12 4E-06 43.8 3.7 48 10-59 55-102 (265)
209 3hem_A Cyclopropane-fatty-acyl 91.8 0.34 1.2E-05 42.1 6.9 105 11-120 72-182 (302)
210 1r18_A Protein-L-isoaspartate( 91.8 0.27 9.3E-06 40.8 5.9 73 11-86 84-174 (227)
211 3ujc_A Phosphoethanolamine N-m 91.7 0.28 9.7E-06 41.2 6.0 98 11-120 55-159 (266)
212 3htx_A HEN1; HEN1, small RNA m 91.5 0.27 9.4E-06 49.6 6.4 104 11-124 721-837 (950)
213 3ckk_A TRNA (guanine-N(7)-)-me 91.5 0.48 1.6E-05 40.0 7.2 107 11-120 46-167 (235)
214 2y1w_A Histone-arginine methyl 91.5 0.24 8.1E-06 44.5 5.5 96 11-119 50-152 (348)
215 3gu3_A Methyltransferase; alph 91.2 0.43 1.5E-05 41.1 6.8 98 11-120 22-126 (284)
216 1nkv_A Hypothetical protein YJ 91.1 0.46 1.6E-05 39.8 6.8 95 11-120 36-140 (256)
217 1fbn_A MJ fibrillarin homologu 91.1 0.33 1.1E-05 40.5 5.8 46 11-58 74-120 (230)
218 3c3p_A Methyltransferase; NP_9 91.1 0.39 1.3E-05 39.3 6.1 94 12-120 57-159 (210)
219 3ocj_A Putative exported prote 90.9 0.17 6E-06 44.2 4.0 94 11-115 118-220 (305)
220 1yub_A Ermam, rRNA methyltrans 90.9 0.023 7.8E-07 48.5 -1.8 44 11-57 29-72 (245)
221 1wzn_A SAM-dependent methyltra 90.8 0.4 1.4E-05 40.2 6.1 99 11-121 41-145 (252)
222 3mgg_A Methyltransferase; NYSG 90.4 0.36 1.2E-05 41.1 5.5 93 11-115 37-135 (276)
223 1jsx_A Glucose-inhibited divis 90.3 0.37 1.3E-05 39.1 5.3 92 12-120 66-164 (207)
224 3dli_A Methyltransferase; PSI- 90.1 0.25 8.6E-06 41.3 4.1 95 12-120 42-139 (240)
225 3g89_A Ribosomal RNA small sub 90.1 0.39 1.3E-05 41.0 5.4 46 11-57 80-125 (249)
226 3dr5_A Putative O-methyltransf 89.8 0.57 1.9E-05 39.1 6.1 95 12-119 57-160 (221)
227 1boo_A Protein (N-4 cytosine-s 89.8 0.34 1.2E-05 43.2 4.9 47 11-60 252-298 (323)
228 1xdz_A Methyltransferase GIDB; 89.7 0.37 1.3E-05 40.5 4.8 44 12-56 71-114 (240)
229 4fsd_A Arsenic methyltransfera 89.5 0.48 1.6E-05 43.0 5.8 94 11-115 83-196 (383)
230 4df3_A Fibrillarin-like rRNA/T 89.4 1.3 4.5E-05 37.6 8.2 91 12-115 78-175 (233)
231 1ej0_A FTSJ; methyltransferase 89.3 0.18 6.1E-06 39.3 2.4 72 11-89 22-102 (180)
232 3vc1_A Geranyl diphosphate 2-C 89.3 0.57 1.9E-05 41.0 5.9 95 11-120 117-221 (312)
233 3dou_A Ribosomal RNA large sub 89.1 0.27 9.1E-06 40.2 3.4 34 11-47 25-58 (191)
234 2o57_A Putative sarcosine dime 89.0 0.69 2.3E-05 39.9 6.3 96 11-120 82-187 (297)
235 3bus_A REBM, methyltransferase 88.9 1 3.5E-05 38.1 7.2 96 11-120 61-166 (273)
236 3thr_A Glycine N-methyltransfe 88.5 0.61 2.1E-05 40.1 5.5 104 11-120 57-174 (293)
237 3ege_A Putative methyltransfer 88.0 0.35 1.2E-05 41.1 3.6 95 11-120 34-130 (261)
238 3bgv_A MRNA CAP guanine-N7 met 87.9 0.64 2.2E-05 40.6 5.3 45 11-57 34-78 (313)
239 2hnk_A SAM-dependent O-methylt 87.6 0.91 3.1E-05 37.9 5.9 46 12-57 61-106 (239)
240 2vdw_A Vaccinia virus capping 87.6 0.53 1.8E-05 41.4 4.6 43 12-56 49-91 (302)
241 2p8j_A S-adenosylmethionine-de 87.2 1.4 4.7E-05 35.5 6.7 98 11-120 23-127 (209)
242 2a14_A Indolethylamine N-methy 87.2 0.34 1.1E-05 41.4 3.0 45 10-56 54-98 (263)
243 4hg2_A Methyltransferase type 87.1 0.32 1.1E-05 41.9 2.8 90 12-117 40-130 (257)
244 1eg2_A Modification methylase 87.0 0.55 1.9E-05 41.8 4.4 46 11-59 242-290 (319)
245 3ufb_A Type I restriction-modi 86.7 0.96 3.3E-05 43.2 6.2 74 12-85 218-312 (530)
246 3c3y_A Pfomt, O-methyltransfer 86.7 1 3.6E-05 37.7 5.8 47 12-58 71-117 (237)
247 3orh_A Guanidinoacetate N-meth 86.2 1.1 3.6E-05 37.7 5.6 99 11-116 60-164 (236)
248 3g07_A 7SK snRNA methylphospha 85.9 1 3.5E-05 39.1 5.5 46 11-58 46-92 (292)
249 3fpf_A Mtnas, putative unchara 85.7 2.2 7.6E-05 37.6 7.5 88 11-117 122-217 (298)
250 1xj5_A Spermidine synthase 1; 85.7 1.1 3.8E-05 40.0 5.7 45 12-57 121-165 (334)
251 1nt2_A Fibrillarin-like PRE-rR 85.7 1.3 4.4E-05 36.6 5.7 39 11-50 57-95 (210)
252 3mq2_A 16S rRNA methyltransfer 85.5 0.66 2.3E-05 38.0 3.9 41 11-52 27-67 (218)
253 1x19_A CRTF-related protein; m 85.1 1.1 3.7E-05 40.0 5.4 97 11-120 190-295 (359)
254 3gjy_A Spermidine synthase; AP 84.2 1.7 5.8E-05 38.7 6.1 72 10-84 88-168 (317)
255 1u2z_A Histone-lysine N-methyl 84.1 1.5 5E-05 40.8 5.9 93 11-116 242-353 (433)
256 3cbg_A O-methyltransferase; cy 84.1 1.7 5.8E-05 36.2 5.8 46 12-57 73-118 (232)
257 3frh_A 16S rRNA methylase; met 84.0 1.3 4.6E-05 38.0 5.1 96 11-122 105-206 (253)
258 3d2l_A SAM-dependent methyltra 83.8 1.3 4.5E-05 36.5 5.0 97 12-120 34-136 (243)
259 3dp7_A SAM-dependent methyltra 83.8 2.8 9.7E-05 37.4 7.6 98 11-120 179-287 (363)
260 2cmg_A Spermidine synthase; tr 82.5 0.78 2.7E-05 39.5 3.1 44 12-58 73-116 (262)
261 2nyu_A Putative ribosomal RNA 80.5 1 3.4E-05 36.0 3.0 36 12-47 23-66 (196)
262 3id6_C Fibrillarin-like rRNA/T 80.4 2.3 8E-05 35.9 5.3 39 11-50 76-115 (232)
263 2plw_A Ribosomal RNA methyltra 80.2 1.2 4E-05 35.8 3.3 36 12-47 23-59 (201)
264 1vlm_A SAM-dependent methyltra 78.9 1.8 6.2E-05 35.4 4.1 90 12-120 48-138 (219)
265 3r3h_A O-methyltransferase, SA 78.7 0.59 2E-05 39.6 1.0 96 12-120 61-169 (242)
266 3ua3_A Protein arginine N-meth 78.4 1.6 5.6E-05 43.1 4.1 74 11-84 409-504 (745)
267 3bkx_A SAM-dependent methyltra 78.1 2.3 7.8E-05 35.9 4.6 46 11-57 43-95 (275)
268 4gqb_A Protein arginine N-meth 77.5 1.9 6.4E-05 42.1 4.3 46 9-54 355-403 (637)
269 2k4m_A TR8_protein, UPF0146 pr 77.2 1.3 4.5E-05 35.1 2.5 36 12-50 36-73 (153)
270 3gwz_A MMCR; methyltransferase 76.6 6.5 0.00022 35.1 7.4 98 11-120 202-307 (369)
271 2oxt_A Nucleoside-2'-O-methylt 76.5 0.95 3.2E-05 39.1 1.7 32 12-47 75-106 (265)
272 1wg8_A Predicted S-adenosylmet 76.1 3.6 0.00012 36.0 5.3 69 13-85 24-99 (285)
273 2wa2_A Non-structural protein 74.7 1.1 3.8E-05 38.9 1.7 32 12-47 83-114 (276)
274 2g72_A Phenylethanolamine N-me 73.5 2.2 7.6E-05 36.5 3.3 45 11-57 71-115 (289)
275 1i4w_A Mitochondrial replicati 72.7 6.1 0.00021 35.6 6.1 45 11-56 58-102 (353)
276 2r3s_A Uncharacterized protein 71.9 3.9 0.00013 35.6 4.6 98 11-120 165-271 (335)
277 1qzz_A RDMB, aclacinomycin-10- 71.3 6.7 0.00023 34.7 6.1 97 11-121 182-288 (374)
278 3i53_A O-methyltransferase; CO 70.9 9 0.00031 33.4 6.8 97 12-120 170-274 (332)
279 3p2e_A 16S rRNA methylase; met 70.0 3.9 0.00013 34.0 4.0 38 11-49 24-61 (225)
280 2ip2_A Probable phenazine-spec 68.8 3.4 0.00012 36.1 3.5 95 13-120 169-272 (334)
281 1af7_A Chemotaxis receptor met 68.6 6.3 0.00022 34.0 5.1 45 11-56 105-157 (274)
282 2p41_A Type II methyltransfera 68.6 2.4 8.1E-05 37.3 2.4 29 12-44 83-111 (305)
283 2dpm_A M.dpnii 1, protein (ade 68.5 3.6 0.00012 35.8 3.6 38 13-55 37-74 (284)
284 1tw3_A COMT, carminomycin 4-O- 67.6 6.4 0.00022 34.7 5.1 96 11-120 183-288 (360)
285 2qe6_A Uncharacterized protein 67.2 15 0.00052 31.3 7.3 98 13-120 79-195 (274)
286 2bm8_A Cephalosporin hydroxyla 66.5 3.8 0.00013 34.3 3.2 95 12-120 82-186 (236)
287 2g1p_A DNA adenine methylase; 62.2 4.5 0.00015 35.1 2.9 38 13-55 29-66 (278)
288 4e2x_A TCAB9; kijanose, tetron 61.8 8.4 0.00029 34.8 4.8 96 11-120 107-207 (416)
289 4h3v_A Oxidoreductase domain p 59.9 16 0.00054 32.2 6.2 74 7-84 1-84 (390)
290 3tka_A Ribosomal RNA small sub 57.8 12 0.00042 33.6 4.9 74 12-87 58-140 (347)
291 3gcz_A Polyprotein; flavivirus 56.6 7.7 0.00026 33.8 3.4 34 12-47 91-125 (282)
292 3v5n_A Oxidoreductase; structu 55.6 24 0.00083 32.0 6.8 81 3-84 28-119 (417)
293 3evf_A RNA-directed RNA polyme 55.3 8.4 0.00029 33.5 3.4 32 12-45 75-107 (277)
294 1yf3_A DNA adenine methylase; 50.8 5.1 0.00017 34.3 1.3 40 13-58 26-65 (259)
295 3mcz_A O-methyltransferase; ad 47.9 17 0.00059 31.7 4.3 98 12-120 180-287 (352)
296 3lst_A CALO1 methyltransferase 47.8 25 0.00086 30.8 5.4 96 12-120 185-286 (348)
297 3u3x_A Oxidoreductase; structu 45.7 59 0.002 28.7 7.6 71 10-84 24-97 (361)
298 4fb5_A Probable oxidoreductase 45.5 35 0.0012 29.9 6.0 76 7-84 20-103 (393)
299 3p8z_A Mtase, non-structural p 44.4 17 0.00059 31.1 3.5 34 12-47 79-113 (267)
300 3lkz_A Non-structural protein 42.1 15 0.0005 32.5 2.8 34 12-47 95-129 (321)
301 4auk_A Ribosomal RNA large sub 41.9 25 0.00085 31.9 4.4 67 11-83 211-278 (375)
302 4a6d_A Hydroxyindole O-methylt 40.0 77 0.0026 27.8 7.4 97 13-120 181-283 (353)
303 2p2s_A Putative oxidoreductase 39.1 46 0.0016 28.8 5.7 71 10-84 2-75 (336)
304 2xyq_A Putative 2'-O-methyl tr 37.9 30 0.001 30.0 4.2 107 12-134 64-189 (290)
305 3eld_A Methyltransferase; flav 37.7 27 0.00092 30.7 3.8 34 11-46 81-115 (300)
306 3reo_A (ISO)eugenol O-methyltr 37.4 19 0.00066 32.0 2.9 93 12-120 204-300 (368)
307 2aot_A HMT, histamine N-methyl 36.2 54 0.0019 27.6 5.6 101 10-120 51-172 (292)
308 3o4f_A Spermidine synthase; am 34.9 93 0.0032 27.0 6.9 100 12-120 84-196 (294)
309 2py6_A Methyltransferase FKBM; 33.1 64 0.0022 29.2 5.8 48 11-58 226-274 (409)
310 2zfu_A Nucleomethylin, cerebra 30.6 22 0.00076 28.3 2.0 97 11-134 67-171 (215)
311 3rc1_A Sugar 3-ketoreductase; 30.5 1.1E+02 0.0037 26.7 6.7 71 9-84 24-98 (350)
312 3llv_A Exopolyphosphatase-rela 29.7 54 0.0019 24.1 4.0 53 28-84 24-79 (141)
313 3uuw_A Putative oxidoreductase 28.4 1.7E+02 0.0058 24.7 7.5 68 8-84 2-75 (308)
314 3ec7_A Putative dehydrogenase; 28.3 93 0.0032 27.2 5.9 75 6-84 17-96 (357)
315 1zh8_A Oxidoreductase; TM0312, 26.7 1.7E+02 0.0058 25.2 7.3 73 10-84 16-91 (340)
316 3dty_A Oxidoreductase, GFO/IDH 25.8 1.5E+02 0.0052 26.2 6.9 76 8-84 8-94 (398)
317 3m2t_A Probable dehydrogenase; 24.8 92 0.0031 27.3 5.2 71 10-84 3-77 (359)
318 3sso_A Methyltransferase; macr 23.4 44 0.0015 30.7 2.8 96 10-120 215-323 (419)
319 3c6k_A Spermine synthase; sper 22.0 1.5E+02 0.0052 26.7 6.0 45 13-59 207-251 (381)
320 3btv_A Galactose/lactose metab 21.4 2.1E+02 0.0072 25.8 7.1 71 10-84 18-98 (438)
321 4gqa_A NAD binding oxidoreduct 20.9 1E+02 0.0035 27.4 4.8 71 12-84 26-105 (412)
No 1
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=100.00 E-value=1.8e-60 Score=435.70 Aligned_cols=269 Identities=31% Similarity=0.463 Sum_probs=219.7
Q ss_pred ccccCCCCCCeEEeeecchhhHHHHHHhcCCCceEE-EEEcCCHHHHHHHHHHcCCCCcccccccccccccc--CCCEEE
Q 023723 4 DMCKNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVV-EAFDINDKANDVYELNFGHRPYQAKRKPLSFRCQL--LNNQLL 80 (278)
Q Consensus 4 ~~~~~~~~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v-~a~e~~~~a~~~y~~N~~~~~~~~~~~~~~~~~~~--~~Dll~ 80 (278)
+|..-+.++++++|||||+||+++||++||+++++| +|+|+|+.|++||++|||+..+..|+..+...+.+ ++|+|+
T Consensus 2 ~l~~m~~~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~~~~~DI~~~~~~~i~~~~~Dil~ 81 (327)
T 3qv2_A 2 PLGSMQQKQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEEVQVKNLDSISIKQIESLNCNTWF 81 (327)
T ss_dssp ------CCCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCCCBCCCTTTCCHHHHHHTCCCEEE
T ss_pred CCccccCCCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCCcccCChhhcCHHHhccCCCCEEE
Confidence 344455668999999999999999999999767999 99999999999999999998655554444443333 799999
Q ss_pred eCCCCCCC--CcccccCCCCCCCCchHHHHhh-h---c--CCcEEEEE-eCCC---c-----cchhhccCc------eec
Q 023723 81 RSPSPLLG--NDDMTVITKHDQPDDSWDKLLE-S---C--DPVERFLE-FSNS---G-----DQVNTETGF------LST 137 (278)
Q Consensus 81 ~g~PCq~f--S~ag~~~g~~d~r~~l~~~~i~-~---~--~P~~~i~E-v~~~---~-----~~~l~~~GY------l~A 137 (278)
||||||+| |.+|++++.+|+|+.||+++++ + . +|++|++| |++. . ++.|+++|| |||
T Consensus 82 ggpPCQ~fs~S~ag~~~~~~d~r~~L~~~~~r~~i~~~~~~P~~~~lENV~gl~~~~~~~~i~~~l~~~GY~v~~~vl~a 161 (327)
T 3qv2_A 82 MSPPCQPYNNSIMSKHKDINDPRAKSVLHLYRDILPYLINKPKHIFIENVPLFKESLVFKEIYNILIKNQYYIKDIICSP 161 (327)
T ss_dssp ECCCCTTCSHHHHTTTCTTTCGGGHHHHHHHHTTGGGCSSCCSEEEEEECGGGGGSHHHHHHHHHHHHTTCEEEEEEECG
T ss_pred ecCCccCcccccCCCCCCCccccchhHHHHHHHHHHHhccCCCEEEEEchhhhcChHHHHHHHHHHHhCCCEEEEEEEeH
Confidence 99999999 9999999999999999999888 5 5 89999999 7642 2 788999999 899
Q ss_pred cCcccCcccc-cccccc--cccccc-----------------------cccCCCChhhhhcCCccccccCCCCCCccccc
Q 023723 138 GTAAVDDFGA-AEETVE--VDRCVS-----------------------IDHFLVPLSLIERWGSAMDIVYPDSKRCCCFT 191 (278)
Q Consensus 138 ~~~~~~dfGv-Q~r~~f--l~~~~~-----------------------~~~~~~p~~~~~~~~~~~d~~~~~~~~~~~~~ 191 (278)
+ +||+ |+|+|+ +..+.+ ..+|.+|.+.+.+++..+|++.|++.++.|++
T Consensus 162 ~-----~yGvPQ~R~R~fivg~r~~f~fP~~~~~~~~~~l~d~Le~~~~~~y~l~~~~~~~~~~~~di~~~~~~~~~~~t 236 (327)
T 3qv2_A 162 I-----DIGIPNSRTRYYVMARLTPFKNEIQLHQEKESMISNYLDNNVNESYSIPSDLILKKGMLFDIVGKDDKRTCCFT 236 (327)
T ss_dssp G-----GGTCSBCCCEEEEEEESSCCCSCCCCCCCSCCCGGGGCCSSCCGGGBCCHHHHHHHGGGSCEEETTSSCBCCCC
T ss_pred H-----HcCCCccceEEEEEEEeCCCCCCCcccccccccHHHHhcccccccccCCHHHHHhhhccccccccccccccccc
Confidence 9 9999 999884 222211 12355666666667778899999888889999
Q ss_pred ccceecccCCCceeeecCCC--CCCCCccccCCcccccCHHHHHHhCCCCCCcccC-CCCCHHHHHHHcCCccCHHHHHH
Q 023723 192 KSYYRYVKGTGSLLATVQPK--NKGKASSLKEQHLRYFTPREVANLHSFPGDFQFP-HHLSLRQRYALLGNSLSIAVVAP 268 (278)
Q Consensus 192 ~~y~r~~~~~~s~~~~~~~~--~~~~~~~~~~~~~R~lT~rE~~rLqgFPd~~~~~-~~~s~~~~~~~iGNaVp~~v~~~ 268 (278)
++|+++..++++.++..... .......+|+.+.|+|||||++|||||||+|.|+ +++|.+++|+|+||||||+|+++
T Consensus 237 ~~y~~y~~~~gs~l~~~~~~~~~~~~~~~~~~~~~R~lt~~E~~rlqgfP~~~~~~~~~~s~~~~y~~~GNsv~v~v~~~ 316 (327)
T 3qv2_A 237 KSYTKIVEGTGSIYCPIEPHFIPVKKAEDLLNKNLRYFTPNEIKKIHGFSSNFTTQIDGLTDKQQYQCLGNSVSCFVIAQ 316 (327)
T ss_dssp TTTTTSSTTSCCEEESSCSSCCCCSSGGGGTTSCCBCCCHHHHHHHTTCCTTCCSCCTTCCHHHHHHHHHTSCCHHHHHH
T ss_pred ccceEEecCCCceeecccccccccCCceeecCCccccCcHHHHHHhCcCCHHHcCCcCCCCHHHHHHHccCccCHHHHHH
Confidence 99999999999887433211 1223456789999999999999999999999999 66799999999999999999999
Q ss_pred HHHHHHhhc
Q 023723 269 LLQYLFAQA 277 (278)
Q Consensus 269 i~~~l~~~~ 277 (278)
|+++|++..
T Consensus 317 i~~~l~~~l 325 (327)
T 3qv2_A 317 LMEYLFDDL 325 (327)
T ss_dssp HHHHHTTTS
T ss_pred HHHHHHHHh
Confidence 999998754
No 2
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=100.00 E-value=7.7e-60 Score=431.54 Aligned_cols=255 Identities=17% Similarity=0.260 Sum_probs=181.9
Q ss_pred CeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCccccccccccccccCCCEEEeCCCCCCCCccc
Q 023723 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQAKRKPLSFRCQLLNNQLLRSPSPLLGNDDM 92 (278)
Q Consensus 13 ~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~~~~~~~~~~~~~~~~Dll~~g~PCq~fS~ag 92 (278)
||||||||||||+++||++|| |++|+|+|+|+.|++||++|||+..+..|+..++..+.+++|+|+||||||+||.+|
T Consensus 1 mkvidLFsG~GG~~~G~~~aG--~~~v~a~e~d~~a~~ty~~N~~~~~~~~DI~~i~~~~~~~~D~l~ggpPCQ~fS~ag 78 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAG--FRIICANEYDKSIWKTYESNHSAKLIKGDISKISSDEFPKCDGIIGGPPSQSWSEGG 78 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTT--CEEEEEEECCTTTHHHHHHHCCSEEEESCGGGCCGGGSCCCSEEECCCCGGGTEETT
T ss_pred CeEEEeCcCccHHHHHHHHCC--CEEEEEEeCCHHHHHHHHHHCCCCcccCChhhCCHhhCCcccEEEecCCCCCcCCCC
Confidence 689999999999999999999 799999999999999999999987765555556666788999999999999999999
Q ss_pred ccCCCCCCCCchHHHHhhh---cCCcEEEEE-eCC---Cc--------cchhhccCc------eeccCcccCcccc-ccc
Q 023723 93 TVITKHDQPDDSWDKLLES---CDPVERFLE-FSN---SG--------DQVNTETGF------LSTGTAAVDDFGA-AEE 150 (278)
Q Consensus 93 ~~~g~~d~r~~l~~~~i~~---~~P~~~i~E-v~~---~~--------~~~l~~~GY------l~A~~~~~~dfGv-Q~r 150 (278)
+++|.+|+|+.||++++++ .+|++|+|| |++ ++ ++.|+++|| |||+ |||+ |+|
T Consensus 79 ~~~g~~d~R~~L~~~~~r~i~~~~Pk~~~~ENV~gl~~~~~~~~~~~i~~~l~~~GY~v~~~vlna~-----~yGvPQ~R 153 (331)
T 3ubt_Y 79 SLRGIDDPRGKLFYEYIRILKQKKPIFFLAENVKGMMAQRHNKAVQEFIQEFDNAGYDVHIILLNAN-----DYGVAQDR 153 (331)
T ss_dssp EECCTTCGGGHHHHHHHHHHHHHCCSEEEEEECCGGGGCTTSHHHHHHHHHHHHHTEEEEEEEEEGG-----GTTCSBCC
T ss_pred CccCCCCchhHHHHHHHHHHhccCCeEEEeeeecccccccccchhhhhhhhhccCCcEEEEEecccc-----cCCCCccc
Confidence 9999999999999997775 899999999 753 22 788899999 9999 9999 999
Q ss_pred ccc--ccccccc-ccCCCChhhhh------cCCccc---------------cccCCCCC-----CcccccccceecccCC
Q 023723 151 TVE--VDRCVSI-DHFLVPLSLIE------RWGSAM---------------DIVYPDSK-----RCCCFTKSYYRYVKGT 201 (278)
Q Consensus 151 ~~f--l~~~~~~-~~~~~p~~~~~------~~~~~~---------------d~~~~~~~-----~~~~~~~~y~r~~~~~ 201 (278)
+|+ ++.+.+. ..+..|..... ..+.+. ....|... ....+....+...+..
T Consensus 154 ~Rvfivg~r~~~~~~~~~p~~~~~~~t~~d~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (331)
T 3ubt_Y 154 KRVFYIGFRKELNINYLPPIPHLIKPTFKDVIWDLKDNPIPALDKNKTNGNKCIYPNHEYFIGSYSTIFMSRNRVRQWNE 233 (331)
T ss_dssp EEEEEEEEEGGGCCCCCCCCCCSCCCCGGGTSGGGSSSCEECBGGGBCCGGGSSSTTCEECCSCCCTTGGGSCCBCCTTS
T ss_pred ceEEEEEEcCCCCcCCCCCCCcCCCCcHHHHhhhcccCCcccccccccccccccccchhhhccccccccccccccccccc
Confidence 984 3333221 12222211100 000000 00001000 0000000001111122
Q ss_pred CceeeecCCC----------------CCCCCccccCCcccccCHHHHHHhCCCCCCcccCCCCCHHHHHHHcCCccCHHH
Q 023723 202 GSLLATVQPK----------------NKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAV 265 (278)
Q Consensus 202 ~s~~~~~~~~----------------~~~~~~~~~~~~~R~lT~rE~~rLqgFPd~~~~~~~~s~~~~~~~iGNaVp~~v 265 (278)
++.+.+.... ..+.....|+...|+||||||||||||||+|.|++. |.+++|+||||||||+|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~LT~rE~aRLQgFPd~f~f~~~-s~~~~ykqiGNAVpp~l 312 (331)
T 3ubt_Y 234 PAFTVQASGRQCQLHPQAPVMLKVSKNLNKFVEGKEHLYRRLTVRECARVQGFPDDFIFHYE-SLNDGYKMIGNAVPVNL 312 (331)
T ss_dssp CBCCCCSCSTTCCBCTTSCCCEEEETTEEECCTTCGGGCCBCBHHHHHHHHTCCTTCCCCCS-BHHHHHHHHHTSCCHHH
T ss_pred ccccccccCcccccccccceeeeecCCCCcccCCCCCcCcCCCHHHHHHhCCCCCCCEeCCC-CHHHHhhhCccCccHHH
Confidence 2222211100 001122346667899999999999999999999743 89999999999999999
Q ss_pred HHHHHHHHHh
Q 023723 266 VAPLLQYLFA 275 (278)
Q Consensus 266 ~~~i~~~l~~ 275 (278)
+++|+++|++
T Consensus 313 a~~I~~~I~~ 322 (331)
T 3ubt_Y 313 AYEIAKTIKS 322 (331)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999975
No 3
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=100.00 E-value=2.8e-58 Score=422.27 Aligned_cols=258 Identities=32% Similarity=0.519 Sum_probs=206.4
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCC-cccccccccccccc--CCCEEEeCCCCCCC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP-YQAKRKPLSFRCQL--LNNQLLRSPSPLLG 88 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~-~~~~~~~~~~~~~~--~~Dll~~g~PCq~f 88 (278)
+++++|||||+||+++||++||+.+++|+|+|+|+.|++||++|||+.. +..|+..+...+.+ ++|+|+||||||+|
T Consensus 3 ~~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~~~~~~~DI~~~~~~~~~~~~~D~l~ggpPCQ~f 82 (333)
T 4h0n_A 3 SHKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPETNLLNRNIQQLTPQVIKKWNVDTILMSPPCQPF 82 (333)
T ss_dssp CEEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECCCGGGCCHHHHHHTTCCEEEECCCCCCS
T ss_pred CCEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCCCceeccccccCCHHHhccCCCCEEEecCCCcch
Confidence 6899999999999999999999767999999999999999999999875 44444444433333 79999999999999
Q ss_pred CcccccCCCCCCCCchHHHHhhh---cC-CcEEEEE-eCCC---c-----cchhhccCc------eeccCcccCcccc-c
Q 023723 89 NDDMTVITKHDQPDDSWDKLLES---CD-PVERFLE-FSNS---G-----DQVNTETGF------LSTGTAAVDDFGA-A 148 (278)
Q Consensus 89 S~ag~~~g~~d~r~~l~~~~i~~---~~-P~~~i~E-v~~~---~-----~~~l~~~GY------l~A~~~~~~dfGv-Q 148 (278)
|.+|++++.+|+|+.||++++++ .+ |++|++| |++. . ++.|+++|| |||+ +||+ |
T Consensus 83 S~ag~~~~~~d~r~~L~~~~~r~i~~~~~P~~~vlENV~gl~~~~~~~~i~~~l~~~GY~v~~~vl~a~-----~~GvPQ 157 (333)
T 4h0n_A 83 TRNGKYLDDNDPRTNSFLYLIGILDQLDNVDYILMENVKGFENSTVRNLFIDKLKECNFIYQEFLLCPS-----TVGVPN 157 (333)
T ss_dssp EETTEECCTTCTTSCCHHHHHHHGGGCTTCCEEEEEECTTGGGSHHHHHHHHHHHHTTEEEEEEEECTT-----TTTCSC
T ss_pred hhhhhccCCcCcccccHHHHHHHHHHhcCCCEEEEecchhhhhhhHHHHHHHHHHhCCCeEEEEEecHH-----HcCCCc
Confidence 99999999999999999997775 66 9999999 7653 2 888999999 8999 9999 9
Q ss_pred ccccc--cccccc---------------------------------cccCCCChhhhhcCCccccccCCCCCCccccccc
Q 023723 149 EETVE--VDRCVS---------------------------------IDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKS 193 (278)
Q Consensus 149 ~r~~f--l~~~~~---------------------------------~~~~~~p~~~~~~~~~~~d~~~~~~~~~~~~~~~ 193 (278)
+|+|+ +..+.+ ..+|.+|++.+ ++...+|+..+.+.++.|++++
T Consensus 158 ~R~R~fiva~r~~~~~~f~~~~~~~~~~P~~~~~~~~l~d~Le~~~~~~y~~~~~~~-~~~~~~d~~~~~~~~~~~~~k~ 236 (333)
T 4h0n_A 158 SRLRYYCTARRNNLTWPFKRRDEIITRLPKDFGVPHSLESIIEEDVDEKFLVPEKML-RCAKVFDICYKTSKRSCCFTKA 236 (333)
T ss_dssp CCCEEEEEEEETTSCCCSCCCSSCBSSCSSCCCSCCCSSTTCCSSCCGGGBCCHHHH-TTGGGCCEECTTCSCCCCCCTT
T ss_pred cceEEEEEEEeCCCCCCCCcccchhhhCCCCccccccHHHHhccCCcccccCCHHHH-HHHHHhccCChhhhhhhhhccc
Confidence 99884 222211 01233344333 4445677788887788899999
Q ss_pred ceecccCCCceeeecCC----------CCCC--C---CccccCCcccccCHHHHHHhCCCCCCcccCCCCCHHHHHHHcC
Q 023723 194 YYRYVKGTGSLLATVQP----------KNKG--K---ASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLG 258 (278)
Q Consensus 194 y~r~~~~~~s~~~~~~~----------~~~~--~---~~~~~~~~~R~lT~rE~~rLqgFPd~~~~~~~~s~~~~~~~iG 258 (278)
|+++..++++...+... +..+ . ...+++.+.|+||||||+|||||||+|.|++.+|.+++|+|+|
T Consensus 237 ~~~~~~g~gs~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~R~lt~~E~~rl~gfp~~~~~~~~~s~~~~y~~~G 316 (333)
T 4h0n_A 237 YTHYADGTGSIFTDKPREVVQKCYAAAAQNEIGGEKFVELFKELKLRYFTPKEVLMIMCFPKSYNLPTNISMKQCYRLLG 316 (333)
T ss_dssp BTTBSSSSCCEECSSCHHHHHHHHHHGGGSCTTCHHHHHHHHTTTCBCCCHHHHHHHTTCCTTCCCCTTSCHHHHHHHHH
T ss_pred cceEEeccCceeccccccchhhhhcccccCCCCcccceeeccCCCcCCCCHHHHHHhCCCCccccCCCCCCHHHHHHHhC
Confidence 99888887775433210 0000 1 1234678999999999999999999999998889999999999
Q ss_pred CccCHHHHHHHHHHHHh
Q 023723 259 NSLSIAVVAPLLQYLFA 275 (278)
Q Consensus 259 NaVp~~v~~~i~~~l~~ 275 (278)
|||+|+|+++|++.|++
T Consensus 317 Nsv~v~v~~~i~~~l~~ 333 (333)
T 4h0n_A 317 NSVNVKVISELLKILFE 333 (333)
T ss_dssp TSCCHHHHHHHHHHHHC
T ss_pred CccCHHHHHHHHHHHhC
Confidence 99999999999999974
No 4
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=100.00 E-value=4.3e-57 Score=413.65 Aligned_cols=263 Identities=18% Similarity=0.218 Sum_probs=200.1
Q ss_pred cccccCCCCCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCccccccccccccccCCCEEEeC
Q 023723 3 KDMCKNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQAKRKPLSFRCQLLNNQLLRS 82 (278)
Q Consensus 3 ~~~~~~~~~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~~~~~~~~~~~~~~~~Dll~~g 82 (278)
-+|+.++|+.++++|||||+||+++||+++| +++|+++|+|+.|++||++||++....|+ ..+.....+++|+|+||
T Consensus 2 ~~~~~~~~~~~~~~dLFaG~Gg~~~g~~~aG--~~~v~~~e~d~~a~~t~~~N~~~~~~~Di-~~~~~~~~~~~D~l~~g 78 (327)
T 2c7p_A 2 IEIKDKQLTGLRFIDLFAGLGGFRLALESCG--AECVYSNEWDKYAQEVYEMNFGEKPEGDI-TQVNEKTIPDHDILCAG 78 (327)
T ss_dssp CCCSSCTTTTCEEEEETCTTTHHHHHHHHTT--CEEEEEECCCHHHHHHHHHHHSCCCBSCG-GGSCGGGSCCCSEEEEE
T ss_pred ccccccccCCCcEEEECCCcCHHHHHHHHCC--CeEEEEEeCCHHHHHHHHHHcCCCCcCCH-HHcCHhhCCCCCEEEEC
Confidence 3577888889999999999999999999999 79999999999999999999998764443 44444556789999999
Q ss_pred CCCCCCCcccccCCCCCCCCchHHHHhhh---cCCcEEEEE-eCC---Cc--------cchhhccCc------eeccCcc
Q 023723 83 PSPLLGNDDMTVITKHDQPDDSWDKLLES---CDPVERFLE-FSN---SG--------DQVNTETGF------LSTGTAA 141 (278)
Q Consensus 83 ~PCq~fS~ag~~~g~~d~r~~l~~~~i~~---~~P~~~i~E-v~~---~~--------~~~l~~~GY------l~A~~~~ 141 (278)
||||+||.||+++|.+|+|+.||++++++ .+|++|++| |++ ++ ++.|+++|| |||+
T Consensus 79 pPCQ~fS~ag~~~g~~d~r~~L~~~~~r~i~~~~P~~~~~ENV~gl~~~~~~~~~~~i~~~l~~~GY~v~~~vl~a~--- 155 (327)
T 2c7p_A 79 FPCQAFSISGKQKGFEDSRGTLFFDIARIVREKKPKVVFMENVKNFASHDNGNTLEVVKNTMNELDYSFHAKVLNAL--- 155 (327)
T ss_dssp CCCTTTCTTSCCCGGGSTTSCHHHHHHHHHHHHCCSEEEEEEEGGGGTGGGGHHHHHHHHHHHHTTBCCEEEEEEGG---
T ss_pred CCCCCcchhcccCCCcchhhHHHHHHHHHHHhccCcEEEEeCcHHHHhccccHHHHHHHHHHHhCCCEEEEEEEEHH---
Confidence 99999999999999999999999997775 899999999 653 21 778899999 9999
Q ss_pred cCcccc-cccccc--ccccccc--ccCCCChhhhhcCCccccccCC------------C-----C-C----Cc-------
Q 023723 142 VDDFGA-AEETVE--VDRCVSI--DHFLVPLSLIERWGSAMDIVYP------------D-----S-K----RC------- 187 (278)
Q Consensus 142 ~~dfGv-Q~r~~f--l~~~~~~--~~~~~p~~~~~~~~~~~d~~~~------------~-----~-~----~~------- 187 (278)
+||+ |+|+|+ +..+.+. ..+.+|.... ...++.|++.+ . . . ..
T Consensus 156 --~~GvPQ~R~R~~iv~~~~~~~~~~~~fP~~~~-~~~tl~d~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 232 (327)
T 2c7p_A 156 --DYGIPQKRERIYMICFRNDLNIQNFQFPKPFE-LNTFVKDLLLPDSEVEHLVIDRKDLVMTNQEIEQTTPKTVRLGIV 232 (327)
T ss_dssp --GGTCSBCCEEEEEEEEBGGGCCCCCCCCCCCC-CCCCGGGTCCCGGGTGGGEECCTTCEECSCCCSSCCSSCCEEEES
T ss_pred --HcCCCccceEEEEEEEeCCCCcccccCCCCcC-CCCcHHHHhcccCCcccccccCCcceeEeeccccCccchhhhhhc
Confidence 9999 999984 3433321 1344443210 00111111110 0 0 0 00
Q ss_pred ccccccceecccCCCceeeecCCCC--CCCCccccCCcccccCHHHHHHhCCCCCCcccCCCCCHHHHHHHcCCccCHHH
Q 023723 188 CCFTKSYYRYVKGTGSLLATVQPKN--KGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAV 265 (278)
Q Consensus 188 ~~~~~~y~r~~~~~~s~~~~~~~~~--~~~~~~~~~~~~R~lT~rE~~rLqgFPd~~~~~~~~s~~~~~~~iGNaVp~~v 265 (278)
..-...|+++.++.++.|+++..+. ......+|+.+.|+||+|||||||||||+|.|.+ |.+++|+||||||||+|
T Consensus 233 ~~~~~~~~~~~~~~~~~Ti~~~~~~~~~~~~~~~~~~~~R~LT~rE~aRLQgFPd~f~f~g--s~~~~ykqIGNAVp~~l 310 (327)
T 2c7p_A 233 GKGGQGERIYSTRGIAITLSAYGGGIFAKTGGYLVNGKTRKLHPRECARVMGYPDSYKVHP--STSQAYKQFGNSVVINV 310 (327)
T ss_dssp TTCCTTCEEEETTSCBCCCCSSCCSTTTTTCEEEETTEEEECCHHHHHHHTTCCTTSCCCS--SHHHHHHHHHHCCCHHH
T ss_pred cCCccccccccCCCCcCceecCCCCccCCCCccCCCCCCcCCCHHHHHHHCCCCcCcEeCC--CHHHHHhHccCCCCHHH
Confidence 0000124555567788888775321 1123456788899999999999999999999997 99999999999999999
Q ss_pred HHHHHHHHHhh
Q 023723 266 VAPLLQYLFAQ 276 (278)
Q Consensus 266 ~~~i~~~l~~~ 276 (278)
+++|+++|++.
T Consensus 311 ~~~Ia~~i~~~ 321 (327)
T 2c7p_A 311 LQYIAYNIGSS 321 (327)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999764
No 5
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=100.00 E-value=5.8e-57 Score=419.87 Aligned_cols=253 Identities=18% Similarity=0.178 Sum_probs=181.3
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCC-ccccccccccc-------cccCCCEEEeCC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP-YQAKRKPLSFR-------CQLLNNQLLRSP 83 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~-~~~~~~~~~~~-------~~~~~Dll~~g~ 83 (278)
+++++|||||+||+++||+++| +++|+++|+|+.|++||++|||+.. +..|+..+... ..+++|+|+|||
T Consensus 2 ~~~vidLFsG~GGlslG~~~aG--~~~v~avE~d~~a~~t~~~N~~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~ggp 79 (376)
T 3g7u_A 2 SLNVIDLFSGVGGLSLGAARAG--FDVKMAVEIDQHAINTHAINFPRSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIGGP 79 (376)
T ss_dssp CCEEEEETCTTSHHHHHHHHHT--CEEEEEECSCHHHHHHHHHHCTTSEEECCCGGGCCHHHHHHHHCSCCCCCEEEECC
T ss_pred CCeEEEEccCcCHHHHHHHHCC--CcEEEEEeCCHHHHHHHHHhCCCCceEecChhhcCHHHHHhhcccCCCeeEEEecC
Confidence 5899999999999999999999 7999999999999999999999875 34443333221 236899999999
Q ss_pred CCCCCCcccccCCCCCCCCchHHHHhhh---cCCcEEEEE-eCCC---c--------cchhhccCc-------eeccCcc
Q 023723 84 SPLLGNDDMTVITKHDQPDDSWDKLLES---CDPVERFLE-FSNS---G--------DQVNTETGF-------LSTGTAA 141 (278)
Q Consensus 84 PCq~fS~ag~~~g~~d~r~~l~~~~i~~---~~P~~~i~E-v~~~---~--------~~~l~~~GY-------l~A~~~~ 141 (278)
|||+||.+|++ +.+|+|+.||++++++ .+|++|++| |++. . + .|+++|| |||+
T Consensus 80 PCQ~fS~ag~~-~~~d~r~~L~~~~~~~v~~~~P~~~v~ENV~gl~s~~~~~~~~~i~-~l~~~GY~v~~~~vl~a~--- 154 (376)
T 3g7u_A 80 PCQGFSSIGKG-NPDDSRNQLYMHFYRLVSELQPLFFLAENVPGIMQEKYSGIRNKAF-NLVSGDYDILDPIKVKAS--- 154 (376)
T ss_dssp CCCTTC--------CHHHHHHHHHHHHHHHHHCCSEEEEEECTTTTCGGGHHHHHHHH-HHHHTTEEECCCEEEEGG---
T ss_pred CCCCcccccCC-CCCCchHHHHHHHHHHHHHhCCCEEEEecchHhhccCcHHHHHHHH-HHHcCCCccCcEEEEEHh---
Confidence 99999999987 6889999999987775 899999999 7642 1 5 8899999 7888
Q ss_pred cCcccc-cccccc--ccccccc--ccCCCChh--hhhcCCccc----cccC-----------------------------
Q 023723 142 VDDFGA-AEETVE--VDRCVSI--DHFLVPLS--LIERWGSAM----DIVY----------------------------- 181 (278)
Q Consensus 142 ~~dfGv-Q~r~~f--l~~~~~~--~~~~~p~~--~~~~~~~~~----d~~~----------------------------- 181 (278)
|||+ |+|+|+ ++.+.+. ..| .|.. .+.++-+.. |++.
T Consensus 155 --dyGvPQ~R~R~~iig~r~~~~~~~~-~p~~~~~~~~~~tv~dai~dlp~~~~~~~~~~~~~~~~~~~~~~~~y~~~~r 231 (376)
T 3g7u_A 155 --DYGAPTIRTRYFFIGVKKSLKLDIS-DEVFMPKMIDPVTVKDALYGLPDIIDANWQSDSESWRTIKKDRKGGFYEKLW 231 (376)
T ss_dssp --GGTCSBCCEEEEEEEEEGGGCCCCC-GGGTSCCSCCCCCHHHHTTTCCSSCEEESSCSSCCCEECCCCCCSHHHHHHH
T ss_pred --hCCCCCCCcEEEEEEEeCCCCCCcc-ccccccccCCCCcHHHHHhcCCcccccccccccccccccCccCccHHHHHhh
Confidence 9999 999984 3333221 111 0000 000000000 0000
Q ss_pred ---C------------------C------C-----------CCcccccccceecccCCCceeeecCCCCC----CCCccc
Q 023723 182 ---P------------------D------S-----------KRCCCFTKSYYRYVKGTGSLLATVQPKNK----GKASSL 219 (278)
Q Consensus 182 ---~------------------~------~-----------~~~~~~~~~y~r~~~~~~s~~~~~~~~~~----~~~~~~ 219 (278)
| . + .....+...|+|+.|+.++.|+++.+... ...+.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~r~~~~~~G~~~~~~~~~Rl~~d~ps~Ti~~~~~~~~g~~~~~r~~ 311 (376)
T 3g7u_A 232 GQIPRNVGDTESIAKLKNNIISGCTGTLHSKIVQERYASLSFGETDKISRSTRLDPNGFCPTLRAGTARDKGSFQAVRPI 311 (376)
T ss_dssp CCCCTTCSCHHHHHHHHTTEESCCEEECCCHHHHHHHHTCCTTCBCTTTCCBBCCTTSCBCCC-------------CCCB
T ss_pred cCcccccccccccccccccccccccccccCHHHHHHHHhCCCCCCccCCceeecCcccCCCceecCcCCCCCcccCcccc
Confidence 0 0 0 00011345689999999999998865322 234679
Q ss_pred cCCcccccCHHHHHHhCCCCCCcccCCCCCHHHHHHHcCCccCHHHHHHHHHHHHhh
Q 023723 220 KEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFAQ 276 (278)
Q Consensus 220 ~~~~~R~lT~rE~~rLqgFPd~~~~~~~~s~~~~~~~iGNaVp~~v~~~i~~~l~~~ 276 (278)
||.+.|.||+||+||||||||+|.|.| +.+++|+||||||||+++++|+++|++.
T Consensus 312 HP~~~R~lTvRE~ARlQsFPD~f~f~g--~~~~~~~qIGNAVPp~la~aia~~I~~~ 366 (376)
T 3g7u_A 312 HPYHPRVITPREAARLQGFPDWFRFHV--TKWHSFRQIGNSVSPIVAEYILKGLYNL 366 (376)
T ss_dssp CSSSSSBCCHHHHHHHHTCCTTCCCCS--SHHHHHHHHHTSCCHHHHHHHHHHHHHH
T ss_pred CCccCcCCCHHHHHHhCCCCcceEECC--ChHHhheeeecCCCHHHHHHHHHHHHHH
Confidence 999999999999999999999999998 8999999999999999999999999764
No 6
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=100.00 E-value=3.3e-57 Score=417.26 Aligned_cols=258 Identities=35% Similarity=0.534 Sum_probs=177.9
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCC-cccccccccccccc--CCCEEEeCCCCCCC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP-YQAKRKPLSFRCQL--LNNQLLRSPSPLLG 88 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~-~~~~~~~~~~~~~~--~~Dll~~g~PCq~f 88 (278)
+++++|||||+||+++||+++|+.+++|+++|+|+.|+++|++||++.. +..|+..+...+.+ ++|+|+||||||+|
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~~~~~~~Di~~~~~~~~~~~~~D~l~~gpPCq~f 81 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPPCQPF 81 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECSCGGGCCHHHHHHHCCSEEEECCC----
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccccccccCCHHHccHhHcCcCCcCEEEEcCCCcch
Confidence 5899999999999999999999777899999999999999999999875 44444434322222 79999999999999
Q ss_pred CcccccCCCCCCCCchHHHHhhh---cC--CcEEEEE-eCCC---c-----cchhhccCc------eeccCcccCcccc-
Q 023723 89 NDDMTVITKHDQPDDSWDKLLES---CD--PVERFLE-FSNS---G-----DQVNTETGF------LSTGTAAVDDFGA- 147 (278)
Q Consensus 89 S~ag~~~g~~d~r~~l~~~~i~~---~~--P~~~i~E-v~~~---~-----~~~l~~~GY------l~A~~~~~~dfGv- 147 (278)
|.+|+++|.+|+|+.||++++++ .+ |++|++| |++. . ++.|+++|| |||+ |||+
T Consensus 82 S~ag~~~g~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~l~~~~~~~~i~~~l~~~GY~v~~~vl~a~-----~~GvP 156 (343)
T 1g55_A 82 TRIGRQGDMTDSRTNSFLHILDILPRLQKLPKYILLENVKGFEVSSTRDLLIQTIENCGFQYQEFLLSPT-----SLGIP 156 (343)
T ss_dssp --------------CHHHHHHHHGGGCSSCCSEEEEEEETTGGGSHHHHHHHHHHHHTTEEEEEEEECGG-----GGTCS
T ss_pred hhcCCcCCccCccchHHHHHHHHHHHhcCCCCEEEEeCCccccCHHHHHHHHHHHHHCCCeeEEEEEEHH-----HCCCC
Confidence 99999999999999999987665 77 9999999 7752 2 788899999 8999 9999
Q ss_pred cccccc--cccccccccCCC---------------------------------------------ChhhhhcCCcccccc
Q 023723 148 AEETVE--VDRCVSIDHFLV---------------------------------------------PLSLIERWGSAMDIV 180 (278)
Q Consensus 148 Q~r~~f--l~~~~~~~~~~~---------------------------------------------p~~~~~~~~~~~d~~ 180 (278)
|+|+|+ +..+.+ ..+.+ +...+.++..+.|+.
T Consensus 157 Q~R~R~~iv~~~~~-~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (343)
T 1g55_A 157 NSRLRYFLIAKLQS-EPLPFQAPGQVLMEFPKIEIHRKNQQDSDLSVKMLKDFLEDDTDVNQYLLPPKSLLRYALLLDIV 235 (343)
T ss_dssp CCCCEEEEEEEESS-SCCTTCCTTCEESSCCC------------CCCCCGGGGCCTTCCHHHHBCCHHHHHHHGGGCCEE
T ss_pred CcccEEEEEEEeCC-CCCCCCCCcchhhhCCHhHhcCccCcccccccccHHHHhccCcchhhccCCHHHHHHHHHHhCCC
Confidence 999884 232221 01111 111111222334444
Q ss_pred CCCCCCcccccccceecccCCCceeeecC-CCC---------C---CCCccccCCcccccCHHHHHHhCCCCCCcccCCC
Q 023723 181 YPDSKRCCCFTKSYYRYVKGTGSLLATVQ-PKN---------K---GKASSLKEQHLRYFTPREVANLHSFPGDFQFPHH 247 (278)
Q Consensus 181 ~~~~~~~~~~~~~y~r~~~~~~s~~~~~~-~~~---------~---~~~~~~~~~~~R~lT~rE~~rLqgFPd~~~~~~~ 247 (278)
.|......|+++.|+++..+.++...+.. ..+ . .....+|+.+.|+||||||||||||||+|.|++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~R~lT~RE~aRLqgFPd~f~f~g~ 315 (343)
T 1g55_A 236 QPTCRRSVCFTKGYGSYIEGTGSVLQTAEDVQVENIYKSLTNLSQEEQITKLLILKLRYFTPKEIANLLGFPPEFGFPEK 315 (343)
T ss_dssp CTTCSCCCCCCTTTTTCCTTSCCEEECCSSCCHHHHHHTTTTCCHHHHHHHHHTTCEECCCHHHHHHHTTCCTTCCCCTT
T ss_pred CccccccchhhccceeeecccccccccccccchhhccccccCCCCccceeccCCCCccccCHHHHHHHcCCChhhccCCC
Confidence 45444556777777665555554332211 000 0 0123468999999999999999999999999987
Q ss_pred CCHHHHHHHcCCccCHHHHHHHHHHHHh
Q 023723 248 LSLRQRYALLGNSLSIAVVAPLLQYLFA 275 (278)
Q Consensus 248 ~s~~~~~~~iGNaVp~~v~~~i~~~l~~ 275 (278)
+|.+++|+||||||||+|+++|++.|++
T Consensus 316 ~s~~~~ykqiGNAVpv~v~~~I~~~l~~ 343 (343)
T 1g55_A 316 ITVKQRYRLLGNSLNVHVVAKLIKILYE 343 (343)
T ss_dssp SCHHHHHHHHHHSCCHHHHHHHHHHHHC
T ss_pred CCHHHHHHHhcCcccHHHHHHHHHHHhC
Confidence 7999999999999999999999999874
No 7
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=100.00 E-value=1.9e-55 Score=444.27 Aligned_cols=260 Identities=16% Similarity=0.148 Sum_probs=190.8
Q ss_pred CCCCCCeEEeeecchhhHHHHHHhcCC----CceEEEEEcCCHHHHHHHHHHcCCCCc-ccccccc--------------
Q 023723 8 NDGEAWRVLEFYSGIGGMRYSLMKADV----SAQVVEAFDINDKANDVYELNFGHRPY-QAKRKPL-------------- 68 (278)
Q Consensus 8 ~~~~~~~v~dLFsG~Gg~~~gl~~aG~----~~~~v~a~e~~~~a~~~y~~N~~~~~~-~~~~~~~-------------- 68 (278)
.+.+++++||||||+||+++||++||. .|++++|+|+|+.|++||++|||++.+ ..++..+
T Consensus 208 ~~~k~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nhp~~~~~~~di~~i~~~~~~~~~~~~~~ 287 (784)
T 4ft4_B 208 MPTRTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNHPQTEVRNEKADEFLALLKEWAVLCKKY 287 (784)
T ss_dssp --CEEEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHCTTSEEEESCHHHHHHHHHHHHHHHHHT
T ss_pred cCCCCCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHCCCCceecCcHHHhhhhhhhcccccccc
Confidence 345679999999999999999999972 369999999999999999999998752 2211000
Q ss_pred --------------------------------------------------------------------------------
Q 023723 69 -------------------------------------------------------------------------------- 68 (278)
Q Consensus 69 -------------------------------------------------------------------------------- 68 (278)
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~i~~~~~~ 367 (784)
T 4ft4_B 288 VQDVDSNLASSEDQADEDSPLDKDEFVVEKLVGICYGGSDRENGIYFKVQWEGYGPEEDTWEPIDNLSDCPQKIREFVQE 367 (784)
T ss_dssp C-----------------------CCCEEEEEEEEESCSSSCSSEEEEEEETTCCTTSCEEEESGGGTTCHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccchhhhhcccccccccccccccchhhhcccccccccccccccccccchhccccccc
Confidence
Q ss_pred -----ccccccCCCEEEeCCCCCCCCcccccCC----CCCCCCchHHHHhhh---cCCcEEEEE-eCC---Cc-------
Q 023723 69 -----SFRCQLLNNQLLRSPSPLLGNDDMTVIT----KHDQPDDSWDKLLES---CDPVERFLE-FSN---SG------- 125 (278)
Q Consensus 69 -----~~~~~~~~Dll~~g~PCq~fS~ag~~~g----~~d~r~~l~~~~i~~---~~P~~~i~E-v~~---~~------- 125 (278)
.....+++|||+||||||+||.||++++ .+|+|+.||++++++ +||++|||| |++ +.
T Consensus 368 ~~~~~~~~~~G~VDvl~GGpPCQ~FS~aG~~kg~~~~~~D~R~~L~~~~~riv~~~rPk~fvlENV~glls~~~g~~~~~ 447 (784)
T 4ft4_B 368 GHKRKILPLPGDVDVICGGPPCQGISGFNRYRNRDEPLKDEKNKQMVTFMDIVAYLKPKYVLMENVVDILKFADGYLGKY 447 (784)
T ss_dssp HHHHTSSCCTTSCSEEEECCCCCSSSGGGGGSCTTSTTTSTTCHHHHHHHHHHHHHCCSEEEEEEEGGGGTGGGGHHHHH
T ss_pred cchhhccCCCCCeEEEEecCCCcchhhhhcccCcCccccCchhHHHHHHHHHHHHHCCCEEEEEecCCccccccchHHHH
Confidence 0001247999999999999999998876 578999999997775 899999999 764 22
Q ss_pred -cchhhccCc------eeccCcccCcccc-cccccc--ccccccc--ccCCCChh-------------------------
Q 023723 126 -DQVNTETGF------LSTGTAAVDDFGA-AEETVE--VDRCVSI--DHFLVPLS------------------------- 168 (278)
Q Consensus 126 -~~~l~~~GY------l~A~~~~~~dfGv-Q~r~~f--l~~~~~~--~~~~~p~~------------------------- 168 (278)
++.|+++|| |||+ +||+ |+|+|+ ++.+.+. ..+..|..
T Consensus 448 il~~l~~lGY~v~~~vLnA~-----dyGVPQ~R~Rvfivg~r~d~~~~~~P~pth~~~~~~~~~~~~~~~~~~~~~~~~~ 522 (784)
T 4ft4_B 448 ALSCLVAMKYQARLGMMVAG-----CYGLPQFRMRVFLWGALSSMVLPKYPLPTYDVVVRGGAPNAFSQCMVAYDETQKP 522 (784)
T ss_dssp HHHHHHHTTCEEEEEEEEGG-----GGTCSSCCEEEEEEEECTTSCCCCEECCSBCCCCCSCSCGGGTTCBCSCCTTCCC
T ss_pred HHHHHHhCCCeeeeeecCHH-----HcCCCcccccceeeeeccCCCcccCCCcccccccccccccccccccccccccccc
Confidence 778899999 9999 9999 999884 2222110 00000000
Q ss_pred ----------hh---h----------------------------------------------------------------
Q 023723 169 ----------LI---E---------------------------------------------------------------- 171 (278)
Q Consensus 169 ----------~~---~---------------------------------------------------------------- 171 (278)
.+ .
T Consensus 523 ~~~~~~t~~dai~dlp~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~r~ 602 (784)
T 4ft4_B 523 SLKKALLLGDAISDLPKVQNHQPNDVMEYGGSPKTEFQRYIRLSRKDMLDWSFGEGAGPDEGKLLDHQPLRLNNDDYERV 602 (784)
T ss_dssp CCBCCCCHHHHHTTSCCCCSCCCCSEECCSSCCCSHHHHHHTCCTTTTTCCTTCSSCCSSTTCEECCCCCCCCHHHHHHH
T ss_pred cccccccHHHHhhcccccccCCCccccccCCCCccHHHHHHhhcccccccccccccccccccccccccccccCHHHHHHH
Confidence 00 0
Q ss_pred ------cCCccccccC------------CCC-------C-----------CcccccccceecccCCCceeeecCCCCCCC
Q 023723 172 ------RWGSAMDIVY------------PDS-------K-----------RCCCFTKSYYRYVKGTGSLLATVQPKNKGK 215 (278)
Q Consensus 172 ------~~~~~~d~~~------------~~~-------~-----------~~~~~~~~y~r~~~~~~s~~~~~~~~~~~~ 215 (278)
.++++.|+.. +.. . ....+...|+|+.++.++.|+++.+.. ..
T Consensus 603 ~~i~~~~g~~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~rl~~d~ps~TItt~~~~-~~ 681 (784)
T 4ft4_B 603 QQIPVKKGANFRDLKGVRVGANNIVEWDPEIERVKLSSGKPLVPDYAMSFIKGKSLKPFGRLWWDETVPTVVTRAEP-HN 681 (784)
T ss_dssp HHSCSSTTCCGGGSTTEEECGGGCEEECTTSCCCBCTTSSBSSCHHHHHGGGGTCCCTTEECCTTCCCSCCCSCCCS-SS
T ss_pred HhcccccCCcccccccccccccccccccchhhhcccccCcccccccccccccCCcCccceeccCCCcccceeccccC-CC
Confidence 0000111100 000 0 001123458889999999999887532 34
Q ss_pred CccccCCcccccCHHHHHHhCCCCCCcccCCCCCHHHHHHHcCCccCHHHHHHHHHHHHh
Q 023723 216 ASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFA 275 (278)
Q Consensus 216 ~~~~~~~~~R~lT~rE~~rLqgFPd~~~~~~~~s~~~~~~~iGNaVp~~v~~~i~~~l~~ 275 (278)
...+||.+.|+||||||||||||||+|.|.| |.+++|+||||||||+|+++|+++|.+
T Consensus 682 ~~~iHp~~~R~LTpRE~ARLQgFPD~y~f~G--s~~~~ykQIGNAVpp~lA~aIg~~I~~ 739 (784)
T 4ft4_B 682 QVIIHPTQARVLTIRENARLQGFPDYYRLFG--PIKEKYIQVGNAVAVPVARALGYCLGQ 739 (784)
T ss_dssp SEEECSSSSSBCCHHHHHHHTTCCTTCCCCS--CHHHHHHHHHHSCCHHHHHHHHHHHHH
T ss_pred CeecCCCCCcCCcHHHHHHHCCCCCCCEeCC--CHHHHHhhccCCCCHHHHHHHHHHHHH
Confidence 5678999999999999999999999999998 899999999999999999999999865
No 8
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=100.00 E-value=2.7e-51 Score=369.91 Aligned_cols=257 Identities=13% Similarity=0.065 Sum_probs=178.4
Q ss_pred ccccCCCCCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCC-ccccccccccccc---cCCCEE
Q 023723 4 DMCKNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP-YQAKRKPLSFRCQ---LLNNQL 79 (278)
Q Consensus 4 ~~~~~~~~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~-~~~~~~~~~~~~~---~~~Dll 79 (278)
-|-+..+++++++|||||+||+++||+++|++.++|+++|+|+.|++||++|||+.. +..|+..+...+. +++|||
T Consensus 8 ~~~~~~~~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~~~~~~~~DI~~i~~~~i~~~~~~Dll 87 (295)
T 2qrv_A 8 HMPAEKRKPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVTQKHIQEWGPFDLV 87 (295)
T ss_dssp --CCCCCCCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHTTTCEEEECCGGGCCHHHHHHTCCCSEE
T ss_pred cCccccCCCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhCCCCceeCCChHHccHHHhcccCCcCEE
Confidence 356778889999999999999999999999533338999999999999999999864 4444333433222 479999
Q ss_pred EeCCCCCCCCccc-ccCCCCCCCCchHHHHhhh---cCCc-------EEEEE-eCCCc-------cchhhccCc--eecc
Q 023723 80 LRSPSPLLGNDDM-TVITKHDQPDDSWDKLLES---CDPV-------ERFLE-FSNSG-------DQVNTETGF--LSTG 138 (278)
Q Consensus 80 ~~g~PCq~fS~ag-~~~g~~d~r~~l~~~~i~~---~~P~-------~~i~E-v~~~~-------~~~l~~~GY--l~A~ 138 (278)
+||||||+||.+| +++|.+|+|+.||++++++ .+|+ +|++| |++.. .+.|+ .+| |||+
T Consensus 88 ~ggpPCQ~fS~ag~~r~g~~d~r~~L~~~~~rii~~~~P~~~~~~P~~~l~ENV~gl~~~~~~~~~~~l~-~~~~vl~a~ 166 (295)
T 2qrv_A 88 IGGSPCNDLSIVNPARKGLYEGTGRLFFEFYRLLHDARPKEGDDRPFFWLFENVVAMGVSDKRDISRFLE-SNPVMIDAK 166 (295)
T ss_dssp EECCCCGGGBTTCTTCCTTTSTTTTHHHHHHHHHHHHSCCTTCCCCCEEEEEEESSBCHHHHHHHHHHHT-SCCCCEEGG
T ss_pred EecCCCccccccCccccccccccchhHHHHHHHHHHhCcccccCCccEEEEEcCcchhhcCccHHHHHHh-cCcEEeecc
Confidence 9999999999999 7888999999999997775 7888 99999 77533 22333 356 9999
Q ss_pred CcccCcccccccccc-cccccccccCCCChh-hhhcCCccccccCCCCCCcccccccceecccCCCceeeecCCCCCCCC
Q 023723 139 TAAVDDFGAAEETVE-VDRCVSIDHFLVPLS-LIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQPKNKGKA 216 (278)
Q Consensus 139 ~~~~~dfGvQ~r~~f-l~~~~~~~~~~~p~~-~~~~~~~~~d~~~~~~~~~~~~~~~y~r~~~~~~s~~~~~~~~~~~~~ 216 (278)
+||.|+|+|+ +.... .+..|.. .+..+-++.|.+.+... ..+. ....+ ...+.++.... ....
T Consensus 167 -----~~~PQ~R~R~~i~~~~---~~~~p~~~~~~~~~tv~d~l~~~~~--~~~~-~~~~i--~~~~~~~~~g~--~~~~ 231 (295)
T 2qrv_A 167 -----EVSAAHRARYFWGNLP---GMNRPLASTVNDKLELQECLEHGRI--AKFS-KVRTI--TTRSNSIKQGK--DQHF 231 (295)
T ss_dssp -----GTSSBCCEEEEEECCT---TSSSCCCCCSSCCCSGGGTSCTTCE--ESSS-SBC------------------CCS
T ss_pred -----eECCccCcEEEEEEec---CccCCCcccccCcccHHHHhcCCcc--cccC-ccccc--cCCCceecCCC--CCCc
Confidence 9966999885 43221 1122211 11112223343322110 0000 00000 00111111110 0112
Q ss_pred ccccCCcccccCHHHHHHhCCCCCCcccCCCCCHHHHHHHcCCccCHHHHHHHHHHHHhh
Q 023723 217 SSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFAQ 276 (278)
Q Consensus 217 ~~~~~~~~R~lT~rE~~rLqgFPd~~~~~~~~s~~~~~~~iGNaVp~~v~~~i~~~l~~~ 276 (278)
..+|+.+.|+||+||++|||||||+|.|++..|.+++|+||||||||+|+++|++.|.+-
T Consensus 232 ~~~~~~~~R~lt~rE~arlqgFPd~~~~~~~~s~~~~~~qiGNaVpv~~~~~i~~~i~~~ 291 (295)
T 2qrv_A 232 PVFMNEKEDILWCTEMERVFGFPVHYTDVSNMSRLARQRLLGRSWSVPVIRHLFAPLKEY 291 (295)
T ss_dssp CEEETTEEECCCHHHHHHHHTCCTTTTCCTTCCHHHHHHHHHTSCCHHHHHHHHGGGGGG
T ss_pred ccccCCCcCCCCHHHHHHHcCCCHHHeeCCCcCHHHHhccEecCcCHHHHHHHHHHHHHH
Confidence 236788899999999999999999999998888999999999999999999999998763
No 9
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=100.00 E-value=7.3e-52 Score=387.68 Aligned_cols=260 Identities=15% Similarity=0.052 Sum_probs=181.8
Q ss_pred CCCCCCeEEeeecchhhHHHHHHhcCCCceE----EEEEcCCHHHHHHHHHHcCCCCc----------------------
Q 023723 8 NDGEAWRVLEFYSGIGGMRYSLMKADVSAQV----VEAFDINDKANDVYELNFGHRPY---------------------- 61 (278)
Q Consensus 8 ~~~~~~~v~dLFsG~Gg~~~gl~~aG~~~~~----v~a~e~~~~a~~~y~~N~~~~~~---------------------- 61 (278)
..|++++|+||||||||+++||+++|+++++ |+++|||+.|+++|++||+....
T Consensus 6 ~~~~~lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~~~~~~~~~~~~~~l~~~s~d~k~~~~ 85 (403)
T 4dkj_A 6 DKIKVIKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHSKNFNPKIERLDRDILSISNDSKMPIS 85 (403)
T ss_dssp CCCEEEEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHCSSCCCCCBCCCTTCCCCBSSSSSCCC
T ss_pred cccccceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcCCCcccchhhhhhhhhhcccccccccc
Confidence 4677899999999999999999999965555 99999999999999999987520
Q ss_pred -------------------------ccccccccccccc-CCCEEEeCCCCCCCCcccccCCCCC---CCCchHHHHhhh-
Q 023723 62 -------------------------QAKRKPLSFRCQL-LNNQLLRSPSPLLGNDDMTVITKHD---QPDDSWDKLLES- 111 (278)
Q Consensus 62 -------------------------~~~~~~~~~~~~~-~~Dll~~g~PCq~fS~ag~~~g~~d---~r~~l~~~~i~~- 111 (278)
..|+..++..+.+ .+|||+||||||+||.+|+++|.+| +|+.||++++++
T Consensus 86 ~~~i~~l~~~~l~~i~~~~~~~~~~~~DI~~i~~~~ip~~vDll~ggpPCQ~fS~ag~~~g~~d~~~~r~~L~~~~~rii 165 (403)
T 4dkj_A 86 EYGIKKINNTIKASYLNYAKKHFNNLFDIKKVNKDNFPKNIDIFTYSFPCQDLSVQGLQKGIDKELNTRSGLLWEIERIL 165 (403)
T ss_dssp HHHHHHHTTBHHHHHHHHHHHHSCBCCCGGGCCTTTSCSSCSEEEECCCCTTTCTTSCCCCCCGGGCCSGGGHHHHHHHH
T ss_pred ccccccccHHHHHHHHhhcccCCCcccchhhcCHhhCCCCCcEEEEeCCCCCHHHhCCCCCCCccccccchhHHHHHHHH
Confidence 0222223333444 4799999999999999999999877 899999986663
Q ss_pred ----------cCCcEEEEE-eCCC---c--------cchhhccCc------eeccCcccCcccc-cccccc--ccccccc
Q 023723 112 ----------CDPVERFLE-FSNS---G--------DQVNTETGF------LSTGTAAVDDFGA-AEETVE--VDRCVSI 160 (278)
Q Consensus 112 ----------~~P~~~i~E-v~~~---~--------~~~l~~~GY------l~A~~~~~~dfGv-Q~r~~f--l~~~~~~ 160 (278)
.+|++|++| |++. . ++.|+++|| |||+ +||+ |+|+|+ +..+.+
T Consensus 166 ~~~~~k~~~~~~Pk~~l~ENV~gl~~~~~~~~~~~i~~~l~~~GY~v~~~vl~a~-----~~GvPQ~R~R~fiva~r~~- 239 (403)
T 4dkj_A 166 EEIKNSFSKEEMPKYLLMENVKNLLSHKNKKNYNTWLKQLEKFGYKSKTYLLNSK-----NFDNCQNRERVFCLSIRDD- 239 (403)
T ss_dssp HHHHHHSCGGGSCSEEEEEEEGGGGSHHHHHHHHHHHHHHHHTTEEEEEEEEEGG-----GTTCSBCCEEEEEEEEEHH-
T ss_pred HHhhhhhccccCCCEEEEecchhhhhhccchHHHHHHHHHHhCCCeEEEEEecHH-----HcCCCccceEEEEEEEcCC-
Confidence 589999999 7642 1 788899999 9999 9999 999985 333322
Q ss_pred ccCCCChhhh--------hcCCccccccCCCC--------------------CCcccccccce------e-cccCCCcee
Q 023723 161 DHFLVPLSLI--------ERWGSAMDIVYPDS--------------------KRCCCFTKSYY------R-YVKGTGSLL 205 (278)
Q Consensus 161 ~~~~~p~~~~--------~~~~~~~d~~~~~~--------------------~~~~~~~~~y~------r-~~~~~~s~~ 205 (278)
|.+|.+.. .....+.|++..+. ....+....|. + +.....+.|
T Consensus 240 --f~fP~~~~~~~~~~~~~~~~~l~dile~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~T 317 (403)
T 4dkj_A 240 --YLEKTGFKFKELEKVKNPPKKIKDILVDSSNYKYLNLNKYETTTFRETKSNIISRPLKNYTTFNSENYVYNINGIGPT 317 (403)
T ss_dssp --HHHHHCCCCCCGGGCCCCCCCGGGGCCCCSCCCCCCCTTSCCCCCEECTTSBEEEECTTSCSCGGGSEEEETTSBBCC
T ss_pred --CCCCCccccccccccccccccHHHHhccccccccchhhhhccccccccccchhccccccccccccCcceecCCCcccc
Confidence 22221110 00112333332110 00011111222 1 111223455
Q ss_pred eecCCCCCCCCccccCCcccccCHHHHHHhCCCCC-CcccCC---CCCHHHHHHHcCCccCHHHHHHHHHHHHhh
Q 023723 206 ATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPG-DFQFPH---HLSLRQRYALLGNSLSIAVVAPLLQYLFAQ 276 (278)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~R~lT~rE~~rLqgFPd-~~~~~~---~~s~~~~~~~iGNaVp~~v~~~i~~~l~~~ 276 (278)
+++... ......+++.+.|+||||||+||||||| +|.++. .+|.+++|+|+||||||+|+++|++.|++-
T Consensus 318 lt~~~~-~~~~~~~~~~~~R~ltprE~~rlqGFpd~~~~~~~~~~~~s~~~~y~~~GNsv~v~v~~~i~~~i~~~ 391 (403)
T 4dkj_A 318 LTASGA-NSRIKIETQQGVRYLTPLECFKYMQFDVNDFKKVQSTNLISENKMIYIAGNSIPVKILEAIFNTLEFV 391 (403)
T ss_dssp CCSSSG-GGSCEEEETTEEEECCHHHHHHHTTCCHHHHHHHHHTSCSCHHHHHHHHHTSCCHHHHHHHHHTCCCC
T ss_pred eecCCC-CceeEEccCCCcccCCHHHHHHHcCCCHHHhhhhhccCCCCHHHHHhhcCCccCHHHHHHHHHHHHHH
Confidence 555211 0111233567799999999999999999 698862 259999999999999999999999988653
No 10
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=100.00 E-value=7.6e-51 Score=413.92 Aligned_cols=263 Identities=17% Similarity=0.148 Sum_probs=194.1
Q ss_pred cccCCCCCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCC-ccccccc------------cccc
Q 023723 5 MCKNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP-YQAKRKP------------LSFR 71 (278)
Q Consensus 5 ~~~~~~~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~-~~~~~~~------------~~~~ 71 (278)
....++.+++++|||||+||+++||++||+ +++++|+|+|+.|++||++|||+.. +.+++.. ....
T Consensus 533 ~~~~~~~~l~~iDLFaG~GGlslGl~~AG~-~~vv~avEid~~A~~ty~~N~p~~~~~~~DI~~l~~~~~~~di~~~~~~ 611 (1002)
T 3swr_A 533 EIEIKLPKLRTLDVFSGCGGLSEGFHQAGI-SDTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILLKLVMAGETTNSRGQ 611 (1002)
T ss_dssp CCCCCCCCEEEEEESCTTSHHHHHHHHHTS-EEEEEEECSSHHHHHHHHHHCTTSEEECSCHHHHHHHHHHTCSBCTTCC
T ss_pred cccccCCCCeEEEeccCccHHHHHHHHCCC-CceEEEEECCHHHHHHHHHhCCCCccccccHHHHhhhccchhhhhhhhh
Confidence 344567889999999999999999999994 3899999999999999999999876 3333111 1111
Q ss_pred ---cccCCCEEEeCCCCCCCCcccccC--CCCCCCCchHHHHhhh---cCCcEEEEE-eCC---Cc--------cchhhc
Q 023723 72 ---CQLLNNQLLRSPSPLLGNDDMTVI--TKHDQPDDSWDKLLES---CDPVERFLE-FSN---SG--------DQVNTE 131 (278)
Q Consensus 72 ---~~~~~Dll~~g~PCq~fS~ag~~~--g~~d~r~~l~~~~i~~---~~P~~~i~E-v~~---~~--------~~~l~~ 131 (278)
..+++|||+||||||+||.+|+++ +.+|+|+.||++++++ .+|++|||| |++ +. ++.|++
T Consensus 612 ~lp~~~~vDll~GGpPCQ~FS~ag~~~~~~~~d~R~~L~~~~~riv~~~rPk~~llENV~glls~~~~~~~~~i~~~L~~ 691 (1002)
T 3swr_A 612 RLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVR 691 (1002)
T ss_dssp BCCCTTTCSEEEECCCCTTCCSSSCCCHHHHHHHTTSHHHHHHHHHHHHCCSEEEEEEEGGGGTTGGGHHHHHHHHHHHH
T ss_pred hcccCCCeeEEEEcCCCcchhhhCCCCCCcccchhhHHHHHHHHHHHHhCCCEEEEeccHHHhccCcchHHHHHHHHHHh
Confidence 124799999999999999999753 3467899999987665 899999999 653 22 778889
Q ss_pred cCc------eeccCcccCcccc-cccccc--cccccc--cccC-------------------------------------
Q 023723 132 TGF------LSTGTAAVDDFGA-AEETVE--VDRCVS--IDHF------------------------------------- 163 (278)
Q Consensus 132 ~GY------l~A~~~~~~dfGv-Q~r~~f--l~~~~~--~~~~------------------------------------- 163 (278)
+|| |||+ +||+ |+|+|+ |+.+.+ ...|
T Consensus 692 lGY~v~~~vLnA~-----dyGvPQ~R~R~fiva~r~g~~~p~~P~pth~~~~~~~~l~~~~~~~~~~~~~~~~~~~p~~~ 766 (1002)
T 3swr_A 692 MGYQCTFGVLQAG-----QYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRT 766 (1002)
T ss_dssp HTCEEEEEEEEGG-----GGTCSBCCEEEEEEEECTTSCCCCCCCCCBCCCGGGCCCCEEETTEEECCSCCCSSCCSBCC
T ss_pred cCCeEEEEEEEHH-----HCCCCccceEEEEEEEeCCCCCCCCCCccccccccccccccccccccccccccccccCCcCC
Confidence 999 9999 9999 999874 221110 0000
Q ss_pred --------CCCh-----------------h-----------------h---------------hh--cCCccccccCCC-
Q 023723 164 --------LVPL-----------------S-----------------L---------------IE--RWGSAMDIVYPD- 183 (278)
Q Consensus 164 --------~~p~-----------------~-----------------~---------------~~--~~~~~~d~~~~~- 183 (278)
-+|. + + ++ .+++|+|+....
T Consensus 767 vTV~DAIsDLP~i~~g~~~~~~~y~~~p~s~yq~~mR~~~~~~~l~~H~~~~~s~~~~~Ri~~IP~~~Gg~wrdlP~~~~ 846 (1002)
T 3swr_A 767 ITVRDTMSDLPEVRNGASALEISYNGEPQSWFQRQLRGAQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIEV 846 (1002)
T ss_dssp CCHHHHHTTSCCCCTTCCCSEECCCSCCCSHHHHHHHTTCSSCCEECCCCCCCCHHHHHHHHTSCCSTTCCGGGCCCCCE
T ss_pred cCHHHHhhhCCccccCccccccccCCCCccHHHHHhhcccccccccCcccccCCHHHHHHHhcCCCCCCCChhhCchhhh
Confidence 0010 0 0 01 234455543200
Q ss_pred -------------------CCC----------------------------------------cccccccceecccCCC-c
Q 023723 184 -------------------SKR----------------------------------------CCCFTKSYYRYVKGTG-S 203 (278)
Q Consensus 184 -------------------~~~----------------------------------------~~~~~~~y~r~~~~~~-s 203 (278)
.+. ...++..|+|+.|+.+ +
T Consensus 847 ~l~~~~~~~~l~~~~~~~~~g~~~~~~l~~~c~~~~~Gk~~~p~~~~~~~l~p~~~~~~~~r~~~~~~~ygRL~wd~p~~ 926 (1002)
T 3swr_A 847 RLSDGTMARKLRYTHHDRKNGRSSSGALRGVCSCVEAGKACDPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFS 926 (1002)
T ss_dssp ECTTSCEEBCCCCCBCCTTTCCCTTCCCCBCSGGGSSSCCCCGGGCCCSBSSCTHHHHHGGGTGGGTTTTCBCCTTSCBS
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccCccceeeccCCCCC
Confidence 000 0113456999999999 5
Q ss_pred eeeecCCCC-CCCCccccCCcccccCHHHHHHhCCCCCCcccCCCCCHHHHHHHcCCccCHHHHHHHHHHHHhh
Q 023723 204 LLATVQPKN-KGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFAQ 276 (278)
Q Consensus 204 ~~~~~~~~~-~~~~~~~~~~~~R~lT~rE~~rLqgFPd~~~~~~~~s~~~~~~~iGNaVp~~v~~~i~~~l~~~ 276 (278)
+|+|. +.. ...++.+||.+.|.||+||+||||||||+|.|.| +.+++|+||||||||+|+++|+++|.+.
T Consensus 927 ~~it~-~~~~~~~g~~~Hp~~~R~lt~rE~arlQ~fPd~~~f~g--~~~~~~~qiGNaVp~~~~~~i~~~i~~~ 997 (1002)
T 3swr_A 927 TTVTN-PEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFG--NILDKHRQVGNAVPPPLAKAIGLEIKLC 997 (1002)
T ss_dssp SCCSS-CCTTCTTCCCBCSSSSSBCCHHHHHHHTTCCTTCCCCS--SHHHHHHHHHHSCCHHHHHHHHHHHHHH
T ss_pred eeEec-CCCCCCCCcccCcccccCCCHHHHHHhCCCCcceEEcC--ChHHHheeeeccCCHHHHHHHHHHHHHH
Confidence 55544 332 2356789999999999999999999999999999 8999999999999999999999998763
No 11
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=100.00 E-value=2.5e-50 Score=418.40 Aligned_cols=260 Identities=18% Similarity=0.177 Sum_probs=187.3
Q ss_pred CCCCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCC-cccccc------------cccccc---
Q 023723 9 DGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP-YQAKRK------------PLSFRC--- 72 (278)
Q Consensus 9 ~~~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~-~~~~~~------------~~~~~~--- 72 (278)
.+.+++++|||||+||+++||++||+ +++++|+|+|+.|++||++|||+.. +.+++. ......
T Consensus 848 ~~~~l~viDLFsG~GGlslGfe~AG~-~~vv~avEid~~A~~ty~~N~p~~~~~~~DI~~l~~~~~~gdi~~~~~~~lp~ 926 (1330)
T 3av4_A 848 KLPKLRTLDVFSGCGGLSEGFHQAGI-SETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLVMAGEVTNSLGQRLPQ 926 (1330)
T ss_dssp CCCCEEEEEETCTTSHHHHHHHHTTS-EEEEEEECCSHHHHHHHHHHCTTSEEECSCHHHHHHHHTTTCSBCSSCCBCCC
T ss_pred ccCCceEEecccCccHHHHHHHHCCC-CceEEEEECCHHHHHHHHHhCCCCcEeeccHHHHhHhhhccchhhhhhhhccc
Confidence 56789999999999999999999995 4899999999999999999999865 333211 111111
Q ss_pred ccCCCEEEeCCCCCCCCccccc--CCCCCCCCchHHHHhhh---cCCcEEEEE-eCC---Cc--------cchhhccCc-
Q 023723 73 QLLNNQLLRSPSPLLGNDDMTV--ITKHDQPDDSWDKLLES---CDPVERFLE-FSN---SG--------DQVNTETGF- 134 (278)
Q Consensus 73 ~~~~Dll~~g~PCq~fS~ag~~--~g~~d~r~~l~~~~i~~---~~P~~~i~E-v~~---~~--------~~~l~~~GY- 134 (278)
.+++|||+||||||+||.+|++ ++.+|.|+.||++++++ .+|++|||| |++ +. +..|+++||
T Consensus 927 ~~~vDvl~GGpPCQ~FS~agr~~~~~~~d~R~~L~~~~lriv~~~rPk~fv~ENV~glls~~~g~~~~~il~~L~~lGY~ 1006 (1330)
T 3av4_A 927 KGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQ 1006 (1330)
T ss_dssp TTTCSEEEECCCCTTTCSSSCCCHHHHHHHHHSHHHHHHHHHHHHCCSEEEEEEEGGGGTTTTTHHHHHHHHHHHHHTCE
T ss_pred cCccceEEecCCCcccccccccccccccchhhHHHHHHHHHHHHhcCcEEEEeccHHHhccCccHHHHHHHHHHHhcCCe
Confidence 2379999999999999999975 33567899999987775 899999999 653 21 678889999
Q ss_pred -----eeccCcccCcccc-cccccc--cccccc--cccCC----------------------------------------
Q 023723 135 -----LSTGTAAVDDFGA-AEETVE--VDRCVS--IDHFL---------------------------------------- 164 (278)
Q Consensus 135 -----l~A~~~~~~dfGv-Q~r~~f--l~~~~~--~~~~~---------------------------------------- 164 (278)
|||+ +||+ |+|+|+ ++.+.+ ...|.
T Consensus 1007 v~~~vLnA~-----dyGVPQ~R~Rvfivg~r~~~~~~~fP~pth~~~~~~~~l~~~~~~~~~~~~i~~~~~~p~~~vTV~ 1081 (1330)
T 3av4_A 1007 CTFGVLQAG-----QYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVR 1081 (1330)
T ss_dssp EEEEEEEGG-----GGSCSBCCEEEEEEEECTTSCCCCCCCCCBCCCGGGCCCCEEETTEEECCSCCCSSCCSBCCCCHH
T ss_pred eeEEEecHH-----HcCCCccccEEEEEEecCCCcccCCCCccccccccccccccccccccccccccccccCCcCCCcHH
Confidence 9999 9999 999884 222111 00000
Q ss_pred -----CCh-----------------hh--------------------------------hh--cCCccccccCC------
Q 023723 165 -----VPL-----------------SL--------------------------------IE--RWGSAMDIVYP------ 182 (278)
Q Consensus 165 -----~p~-----------------~~--------------------------------~~--~~~~~~d~~~~------ 182 (278)
+|. +. ++ .+++|.|+..-
T Consensus 1082 DAI~DLP~i~~g~~~~~~~y~~~p~s~~q~~iR~~~~~~~l~~H~~~~~s~~~~~Ri~~ip~~~G~~~~dlp~~~~~l~~ 1161 (1330)
T 3av4_A 1082 DTMSDLPEIQNGASNSEIPYNGEPLSWFQRQLRGSHYQPILRDHICKDMSPLVAARMRHIPLFPGSDWRDLPNIQVRLGD 1161 (1330)
T ss_dssp HHHTTSCCCCTTCCCSEEECCSCCCSHHHHHHHCSSCCCEEECCCCCCCCHHHHHHHHHSCSSTTCCGGGCCCCCEECSS
T ss_pred HHhhcCcccccCCcccccccCCCcccHHHHHhhccccccccccccccccCHHHHHHHHhccCCCCCCcccchhhhhhccc
Confidence 000 00 00 01122232100
Q ss_pred ------------C--CC-------C--------------------------------cccccccceecccCCCceeeecC
Q 023723 183 ------------D--SK-------R--------------------------------CCCFTKSYYRYVKGTGSLLATVQ 209 (278)
Q Consensus 183 ------------~--~~-------~--------------------------------~~~~~~~y~r~~~~~~s~~~~~~ 209 (278)
. .. + ...++..|+|+.|+.++.++++.
T Consensus 1162 g~~~~~l~y~~~~~k~g~~~~~~lrg~~~~~~Gk~~~p~~r~~~tL~p~~~~~~g~~~~~~~~~ygRL~~d~p~sttiT~ 1241 (1330)
T 3av4_A 1162 GVIAHKLQYTFHDVKNGYSSTGALRGVCSCAEGKACDPESRQFSTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTN 1241 (1330)
T ss_dssp SCEEBCCCCCBCCTTTCCCTTSCCCBSSGGGGTSCCCSSSCCCSBSSCTHHHHHGGGTGGGTTTTCBCCTTSCBSSCCSS
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceecccCCCCCceEeC
Confidence 0 00 0 00012357888888765554444
Q ss_pred CCCCC-CCccccCCcccccCHHHHHHhCCCCCCcccCCCCCHHHHHHHcCCccCHHHHHHHHHHHHhh
Q 023723 210 PKNKG-KASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFAQ 276 (278)
Q Consensus 210 ~~~~~-~~~~~~~~~~R~lT~rE~~rLqgFPd~~~~~~~~s~~~~~~~iGNaVp~~v~~~i~~~l~~~ 276 (278)
+...+ .++.+||.+.|.||+||+||||||||+|.|.| +.+++|+||||||||+|+++|+++|.+-
T Consensus 1242 ~~~~~k~g~~iHP~q~R~LTVREaARLQsFPDdF~F~G--s~t~~yrQIGNAVPPlLAkAIA~~I~~~ 1307 (1330)
T 3av4_A 1242 PEPMGKQGRVLHPEQHRVVSVRECARSQGFPDSYRFFG--NILDRHRQVGNAVPPPLAKAIGLEIKLC 1307 (1330)
T ss_dssp CCTTSSSCCCBCSSSSSBCCHHHHHHHTTCCTTCCCCS--SHHHHHHHHHHSCCHHHHHHHHHHHHHH
T ss_pred CcccCCCCcccCccccccCCHHHHHHhcCCCCCeEECC--CHhhhhEEeEeCcCHHHHHHHHHHHHHH
Confidence 33222 34679999999999999999999999999999 8999999999999999999999999763
No 12
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=100.00 E-value=5.2e-48 Score=368.50 Aligned_cols=253 Identities=21% Similarity=0.255 Sum_probs=160.0
Q ss_pred CCCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHc---CCCC-ccccccccc----------------
Q 023723 10 GEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNF---GHRP-YQAKRKPLS---------------- 69 (278)
Q Consensus 10 ~~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~---~~~~-~~~~~~~~~---------------- 69 (278)
..+++++|||||+||+++||++|| |++|+++|+|+.|++||++|| |... +..|+..+.
T Consensus 86 ~~~~~viDLFaG~GGlslG~~~aG--~~~v~avE~d~~A~~ty~~N~~~~p~~~~~~~DI~~i~~~~~~~~~~~~~~~~i 163 (482)
T 3me5_A 86 HYAFRFIDLFAGIGGIRRGFESIG--GQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIRDITLSHQEGVSDEAAAEHI 163 (482)
T ss_dssp CCSEEEEEESCTTSHHHHHHHTTT--EEEEEEECCCHHHHHHHHHHSCCCTTTCEEESCTHHHHCTTCTTSCHHHHHHHH
T ss_pred CccceEEEecCCccHHHHHHHHCC--CEEEEEEeCCHHHHHHHHHhcccCCCcceeccchhhhhhccccccchhhHHhhh
Confidence 457999999999999999999999 799999999999999999999 4433 333322221
Q ss_pred cccccCCCEEEeCCCCCCCCcccccC--------CC-CCCCCchHHHHhhh---cCCcEEEEE-eCCC---c--------
Q 023723 70 FRCQLLNNQLLRSPSPLLGNDDMTVI--------TK-HDQPDDSWDKLLES---CDPVERFLE-FSNS---G-------- 125 (278)
Q Consensus 70 ~~~~~~~Dll~~g~PCq~fS~ag~~~--------g~-~d~r~~l~~~~i~~---~~P~~~i~E-v~~~---~-------- 125 (278)
....+++|||+||||||+||.||+++ |+ +|+|+.||++++++ .+|++|||| |++. +
T Consensus 164 ~~~~~~~Dvl~gGpPCQ~FS~AG~~k~~~~g~~~G~~~D~R~~Lf~e~~riI~~~rPk~fvlENV~gl~s~~~g~~f~~i 243 (482)
T 3me5_A 164 RQHIPEHDVLLAGFPCQPFSLAGVSKKNSLGRAHGFACDTQGTLFFDVVRIIDARRPAMFVLENVKNLKSHDKGKTFRII 243 (482)
T ss_dssp HHHSCCCSEEEEECCCCCC------------------CTTTTSHHHHHHHHHHHHCCSEEEEEEETTTTTGGGGHHHHHH
T ss_pred hhcCCCCCEEEecCCCcchhhhCcccccccccccccccCccccHHHHHHHHHHHcCCcEEEEeCcHHHhcccCCcHHHHH
Confidence 12347899999999999999999653 33 37899999997775 899999999 7642 2
Q ss_pred cchhhccCc---------------eeccCcccCcccc-cccccc--ccccccc---ccCCCChh--hhh-cCCccccc--
Q 023723 126 DQVNTETGF---------------LSTGTAAVDDFGA-AEETVE--VDRCVSI---DHFLVPLS--LIE-RWGSAMDI-- 179 (278)
Q Consensus 126 ~~~l~~~GY---------------l~A~~~~~~dfGv-Q~r~~f--l~~~~~~---~~~~~p~~--~~~-~~~~~~d~-- 179 (278)
++.|+++|| |||+ +| + |+|+|+ ++.+.+. ..|.+|.- ..+ ....+.|+
T Consensus 244 ~~~L~~lGY~v~~~~~~g~~~~~vlnA~-----~~-vPQ~R~R~fivg~r~~~~~~~~F~~~~~~~~~p~~~~~l~diLe 317 (482)
T 3me5_A 244 MQTLDELGYDVADAEDNGPDDPKIIDGK-----HF-LPQHRERIVLVGFRRDLNLKADFTLRDISECFPAQRVTLAQLLD 317 (482)
T ss_dssp HHHHHHTTEEETTTTCCSTTCTTEEEGG-----GT-SSBCCEEEEEEEEEGGGCCCTTCCGGGGGGGSCSSCCCTGGGSC
T ss_pred HHHHhcCCcEEEeccccCcccceeeecc-----cc-CCccceEEEEEEEecCcccccCcCccccccccCCCcccHHHHhh
Confidence 778889998 3455 88 8 999884 3333221 12221100 000 00112222
Q ss_pred -----------------------------------cCCCCCCccccc--ccceecccCCCceeeecCCCC-CCCCcccc-
Q 023723 180 -----------------------------------VYPDSKRCCCFT--KSYYRYVKGTGSLLATVQPKN-KGKASSLK- 220 (278)
Q Consensus 180 -----------------------------------~~~~~~~~~~~~--~~y~r~~~~~~s~~~~~~~~~-~~~~~~~~- 220 (278)
+.|+.....+.| ..|++ +....++...... .+.....+
T Consensus 318 ~~~~~ky~l~~~~~~~l~~~~~~~~~~g~gf~~~i~~~~~~~~~~~Ti~a~~~k---~gs~~~i~~~~~~~~~~~~~~~~ 394 (482)
T 3me5_A 318 PMVEAKYILTPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYK---DGAEILIDRGWDMATGEKDFDDP 394 (482)
T ss_dssp SSCCGGGBCCHHHHHHHHHHHHC----------CEECTTSGGGGTCCBCCC------CCSSSEECCCCCHHHHHHCTTCT
T ss_pred cccccccccCHHHHHHHHHHHHhhhcccCCcccceecCCcccccceeeEEeeec---cCcceeecccccccCCccccccc
Confidence 222211111111 11111 1111111110000 00000112
Q ss_pred ---CCcccccCHHHHHHhCCCC----CCcccCCCCCHHHHHHHcCCccCHHHHHHHHHHHHh
Q 023723 221 ---EQHLRYFTPREVANLHSFP----GDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFA 275 (278)
Q Consensus 221 ---~~~~R~lT~rE~~rLqgFP----d~~~~~~~~s~~~~~~~iGNaVp~~v~~~i~~~l~~ 275 (278)
....|+|||+||+|||||| ++|.+.+ |.+++|+||||||||+|+++|++.|.+
T Consensus 395 ~~~~~~~R~lTprE~~rlqgFp~~~~~~~~~~~--s~~~~y~q~GNsV~v~v~~~i~~~l~~ 454 (482)
T 3me5_A 395 LNQQHRPRRLTPRECARLMGFEAPGEAKFRIPV--SDTQAYRQFGNSVVVPVFAAVAKLLEP 454 (482)
T ss_dssp TGGGGCCEECCHHHHHHHHTSSCTTCCCSCCCS--CHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred cccCCCcccCCHHHHHHHcCCCCccccceeccC--CHHHHHHHcCCccChHHHHHHHHHHHH
Confidence 2468999999999999999 5677765 999999999999999999999999865
No 13
>2qrv_B DNA (cytosine-5)-methyltransferase 3-like; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=99.88 E-value=1.5e-23 Score=180.27 Aligned_cols=122 Identities=10% Similarity=-0.108 Sum_probs=84.1
Q ss_pred ccCCCCCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCC-ccccccccccc---cccCCCEEEe
Q 023723 6 CKNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP-YQAKRKPLSFR---CQLLNNQLLR 81 (278)
Q Consensus 6 ~~~~~~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~-~~~~~~~~~~~---~~~~~Dll~~ 81 (278)
....+++++++|||||+|| ||++||+ ++ +.||+... +.+|+.+++.. +.+++|||+|
T Consensus 27 ~~~~~~~~~vidLFaGig~---Gl~~aGf--~~--------------~~N~~~~~~~~~DI~~i~~~~i~~~~~~DlliG 87 (230)
T 2qrv_B 27 PVWRRQPVRVLSLFEDIKK---ELTSLGF--LE--------------SGSDPGQLKHVVDVTDTVRKDVEEWGPFDLVYG 87 (230)
T ss_dssp CGGGCCCCCEEEESSCCTT---TTTTTTS--CC-------------------CCEEEESCCTTCCHHHHHHTCCCSEEEE
T ss_pred chhhcCCceEEEeccChhH---HHHHCCC--ch--------------hhcCCCCcEecCChhhCCHhHhcccCCCCEEEE
Confidence 3345567999999999998 8999994 54 47888754 33443334322 2358999999
Q ss_pred CCCCCCCCcccccCCCCCCCCchHHHHhhh---cCCc-------EEEEE-eCCCc------cchhhccCc--eeccCccc
Q 023723 82 SPSPLLGNDDMTVITKHDQPDDSWDKLLES---CDPV-------ERFLE-FSNSG------DQVNTETGF--LSTGTAAV 142 (278)
Q Consensus 82 g~PCq~fS~ag~~~g~~d~r~~l~~~~i~~---~~P~-------~~i~E-v~~~~------~~~l~~~GY--l~A~~~~~ 142 (278)
|||||+||.+| +|+.||++++|+ .+|+ +|++| |++.. +..+.+.+| |||+
T Consensus 88 G~PCQ~FS~ag-------~rg~Lf~ef~Riv~~~rPk~~~~~P~~fv~ENV~gL~~~~~~~i~~~l~~~~~vLnA~---- 156 (230)
T 2qrv_B 88 ATPPLGHTCDR-------PPSWYLFQFHRLLQYARPKPGSPRPFFWMFVDNLVLNKEDLDVASRFLEMEPVTIPDV---- 156 (230)
T ss_dssp ECCCTTTSSCS-------CTHHHHHHHHHHHHHHCCCSSCCSCCEEEEEECSCSCHHHHHHHHHHHTSCCEECCCC----
T ss_pred CCCCCcccccC-------CCchHHHHHHHHHHHHCcCcccCCCcEEEEeccHHhhhccHHHHHHHHcCCcEEEEcc----
Confidence 99999999987 378999998775 7888 89999 77542 333334566 9999
Q ss_pred Ccccc-ccccccccccc
Q 023723 143 DDFGA-AEETVEVDRCV 158 (278)
Q Consensus 143 ~dfGv-Q~r~~fl~~~~ 158 (278)
+||+ |+|++|++...
T Consensus 157 -dfgvpQrRr~f~g~~~ 172 (230)
T 2qrv_B 157 -HGGSLQNAVRVWSNIP 172 (230)
T ss_dssp -CSCC----CEEEECST
T ss_pred -cCCcCcccEEEEeecC
Confidence 9999 88888876543
No 14
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=99.87 E-value=7.8e-23 Score=187.37 Aligned_cols=119 Identities=10% Similarity=-0.087 Sum_probs=90.4
Q ss_pred CCCCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCC-ccccccccccc---cccCCCEEEeCCC
Q 023723 9 DGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP-YQAKRKPLSFR---CQLLNNQLLRSPS 84 (278)
Q Consensus 9 ~~~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~-~~~~~~~~~~~---~~~~~Dll~~g~P 84 (278)
.+++++++|||||+|| ||++||+ ++ ++||++.. +.+|+.++... +.+++|||+||||
T Consensus 186 ~~~~ikvidLFaGiGg---Gl~~aGf--~v--------------~~N~~~~~~~~~DI~~i~~~~i~~~~~~DlliGG~P 246 (386)
T 2pv0_B 186 RRQPVRVLSLFEDIKK---ELTSLGF--LE--------------SGSDPGQLKHVVDVTDTVRKDVEEWGPFDLVYGATP 246 (386)
T ss_dssp GCCCCCEEEESSCCHH---HHHHTTS--SC--------------SSCCSCSEEEESCCTTCCHHHHHHSCCCSEEEEECC
T ss_pred hhcCceeeEEeccCCh---hHhhcCc--cH--------------HHcCCCCcEEeCChhhCCHhHhcccCCCCEEEECCC
Confidence 4667999999999997 9999994 54 47998754 33343333322 3468999999999
Q ss_pred CCCCCcccccCCCCCCCCchHHHHhhh---cCCc-------EEEEE-eCCCc------cchhhccCc--eeccCcccCcc
Q 023723 85 PLLGNDDMTVITKHDQPDDSWDKLLES---CDPV-------ERFLE-FSNSG------DQVNTETGF--LSTGTAAVDDF 145 (278)
Q Consensus 85 Cq~fS~ag~~~g~~d~r~~l~~~~i~~---~~P~-------~~i~E-v~~~~------~~~l~~~GY--l~A~~~~~~df 145 (278)
||+||.|| +|+.||++++|+ .+|+ +|+|| |++.. +..+.+..| |||+ ||
T Consensus 247 CQ~FS~A~-------~Rg~Lf~ef~Riv~~~rPk~~~~~P~~fv~ENV~gL~~~~~~~i~~~L~v~~~VLnA~-----dy 314 (386)
T 2pv0_B 247 PLGHTCDR-------PPSWYLFQFHRLLQYARPKPGSPGPFFWMFVDNLVLNKEDLDVASRFLEMEPVTIPDV-----HG 314 (386)
T ss_dssp CTTTCSCS-------CTHHHHHHHHHHHHHHSCCSSCCSCCEEEEEECSCSCHHHHHHHHHHTTSCCCEEECC-----CS
T ss_pred CCcccccC-------CcchHHHHHHHHHHHhCCCcccCCCcEEEEEechhhhhcchHHHHHHHcCCeEEEEcc-----cc
Confidence 99999985 578999998775 7887 89999 87642 222223566 9999 99
Q ss_pred cc-ccccccccccc
Q 023723 146 GA-AEETVEVDRCV 158 (278)
Q Consensus 146 Gv-Q~r~~fl~~~~ 158 (278)
|+ |+|+||++...
T Consensus 315 GVPQrRrRf~g~~~ 328 (386)
T 2pv0_B 315 GSLQNAVRVWSNIP 328 (386)
T ss_dssp SSCCCEEEEEECSS
T ss_pred CccccccEEEEECC
Confidence 99 99999987654
No 15
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=98.05 E-value=2.2e-06 Score=77.90 Aligned_cols=106 Identities=16% Similarity=0.022 Sum_probs=68.6
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCC--------cccccccccc-c--cccCCCEEE
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP--------YQAKRKPLSF-R--CQLLNNQLL 80 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~--------~~~~~~~~~~-~--~~~~~Dll~ 80 (278)
.-+|||||||.|++++.+...| . .|.++|+++.+++..+.|..... +..+...... . ....+|+++
T Consensus 154 ~~~VLDlgcGtG~~sl~la~~g--a-~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii 230 (332)
T 2igt_A 154 PLKVLNLFGYTGVASLVAAAAG--A-EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIIL 230 (332)
T ss_dssp CCEEEEETCTTCHHHHHHHHTT--C-EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEE
T ss_pred CCcEEEcccccCHHHHHHHHcC--C-EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEE
Confidence 4589999999999999999988 4 78999999999999999864211 1222111110 0 124799999
Q ss_pred eCCCCCCCCcccccCCCCCCCCchHHHHhhhcCCc-EEEEE
Q 023723 81 RSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPV-ERFLE 120 (278)
Q Consensus 81 ~g~PCq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~-~~i~E 120 (278)
..|||...+..+......+....++..+.+.++|. +++++
T Consensus 231 ~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~ 271 (332)
T 2igt_A 231 TDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVL 271 (332)
T ss_dssp ECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEE
T ss_pred ECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEE
Confidence 99999776533211100011123344455668996 44777
No 16
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=97.93 E-value=8.3e-06 Score=75.57 Aligned_cols=106 Identities=15% Similarity=0.057 Sum_probs=69.4
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCc--------ccccccc-ccc--cccCCCEEE
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY--------QAKRKPL-SFR--CQLLNNQLL 80 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~--------~~~~~~~-~~~--~~~~~Dll~ 80 (278)
.-+|||+|||.|++++.+...| ...|.++|+++.|++..+.|.....+ ..+.... ... ....+|+++
T Consensus 221 ~~~VLDl~cG~G~~sl~la~~g--~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii 298 (396)
T 3c0k_A 221 NKRVLNCFSYTGGFAVSALMGG--CSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIV 298 (396)
T ss_dssp TCEEEEESCTTCSHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CCeEEEeeccCCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEE
Confidence 4589999999999999999888 57899999999999999999743222 1221111 100 124799999
Q ss_pred eCCCCCCCCcccccCCCCCCCCchHHHHhhhcCCc-EEEEE
Q 023723 81 RSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPV-ERFLE 120 (278)
Q Consensus 81 ~g~PCq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~-~~i~E 120 (278)
..||+...|........ ..-..++...++.++|. ++++.
T Consensus 299 ~dpP~~~~~~~~~~~~~-~~~~~~l~~~~~~LkpgG~l~~~ 338 (396)
T 3c0k_A 299 MDPPKFVENKSQLMGAC-RGYKDINMLAIQLLNEGGILLTF 338 (396)
T ss_dssp ECCSSTTTCSSSSSCCC-THHHHHHHHHHHTEEEEEEEEEE
T ss_pred ECCCCCCCChhHHHHHH-HHHHHHHHHHHHhcCCCcEEEEE
Confidence 99998776643221111 11113344466668885 55555
No 17
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=97.73 E-value=0.0001 Score=61.20 Aligned_cols=73 Identities=18% Similarity=0.166 Sum_probs=56.1
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCc-----cccccccccccccCCCEEEeCCCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-----QAKRKPLSFRCQLLNNQLLRSPSP 85 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~-----~~~~~~~~~~~~~~~Dll~~g~PC 85 (278)
..-+|||++||.|+++..+...| ...|.++|+++.+++..+.|...... ..+...+ ...+|+++..||+
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~----~~~~D~v~~~~p~ 122 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLLG--AKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEF----NSRVDIVIMNPPF 122 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGC----CCCCSEEEECCCC
T ss_pred CcCEEEEeeCCCCHHHHHHHHcC--CCEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHHc----CCCCCEEEEcCCC
Confidence 35689999999999999998887 46899999999999999999864321 2222211 1379999999998
Q ss_pred CCCC
Q 023723 86 LLGN 89 (278)
Q Consensus 86 q~fS 89 (278)
...+
T Consensus 123 ~~~~ 126 (207)
T 1wy7_A 123 GSQR 126 (207)
T ss_dssp SSSS
T ss_pred cccc
Confidence 6644
No 18
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=97.72 E-value=2.5e-05 Score=69.19 Aligned_cols=70 Identities=11% Similarity=0.139 Sum_probs=51.9
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCcc-------ccccccccccccCCCEEEeCCC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQ-------AKRKPLSFRCQLLNNQLLRSPS 84 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~~-------~~~~~~~~~~~~~~Dll~~g~P 84 (278)
.-+|+|+|||+|++++.+-..| ...|+|+|+|+.|.+..+.|.....+. .|...+ .....+|.++.++|
T Consensus 126 g~~VlD~~aG~G~~~i~~a~~g--~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~--~~~~~~D~Vi~~~p 201 (278)
T 3k6r_A 126 DELVVDMFAGIGHLSLPIAVYG--KAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDF--PGENIADRILMGYV 201 (278)
T ss_dssp TCEEEETTCTTTTTTHHHHHHT--CCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTC--CCCSCEEEEEECCC
T ss_pred CCEEEEecCcCcHHHHHHHHhc--CCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHh--ccccCCCEEEECCC
Confidence 4589999999999998777777 357899999999999999997433222 221111 12356899999999
Q ss_pred C
Q 023723 85 P 85 (278)
Q Consensus 85 C 85 (278)
+
T Consensus 202 ~ 202 (278)
T 3k6r_A 202 V 202 (278)
T ss_dssp S
T ss_pred C
Confidence 5
No 19
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=97.69 E-value=4.5e-05 Score=67.17 Aligned_cols=86 Identities=12% Similarity=0.081 Sum_probs=62.5
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCc-------cccccccccccccCCCEEEeCCC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-------QAKRKPLSFRCQLLNNQLLRSPS 84 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~-------~~~~~~~~~~~~~~~Dll~~g~P 84 (278)
.-+|+|+|||.|++++.+...|. ..|.++|+++.+++..+.|.....+ ..+...... ...+|+++..||
T Consensus 126 ~~~VLDlgcG~G~~~~~la~~~~--~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~--~~~fD~Vi~~~p 201 (278)
T 2frn_A 126 DELVVDMFAGIGHLSLPIAVYGK--AKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG--ENIADRILMGYV 201 (278)
T ss_dssp TCEEEETTCTTTTTHHHHHHHTC--CEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC--CSCEEEEEECCC
T ss_pred CCEEEEecccCCHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc--cCCccEEEECCc
Confidence 46899999999999999998883 4799999999999999988642221 222221111 357999999988
Q ss_pred CCCCCcccccCCCCCCCCchHHHHhhhcCCc
Q 023723 85 PLLGNDDMTVITKHDQPDDSWDKLLESCDPV 115 (278)
Q Consensus 85 Cq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~ 115 (278)
+.. ..++.++.+.++|.
T Consensus 202 ~~~--------------~~~l~~~~~~Lkpg 218 (278)
T 2frn_A 202 VRT--------------HEFIPKALSIAKDG 218 (278)
T ss_dssp SSG--------------GGGHHHHHHHEEEE
T ss_pred hhH--------------HHHHHHHHHHCCCC
Confidence 422 24566677788884
No 20
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=97.56 E-value=5.9e-05 Score=69.97 Aligned_cols=70 Identities=23% Similarity=0.200 Sum_probs=51.8
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCc-----cccccc-cccccccCCCEEEeCCCC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-----QAKRKP-LSFRCQLLNNQLLRSPSP 85 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~-----~~~~~~-~~~~~~~~~Dll~~g~PC 85 (278)
.-+|||+|||.|++++.+...| .+ |.++|+++.+++.-+.|.....+ ..|... +... ...+|+++..|||
T Consensus 215 g~~VLDlg~GtG~~sl~~a~~g--a~-V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~-~~~fD~Ii~dpP~ 290 (393)
T 4dmg_A 215 GERVLDVYSYVGGFALRAARKG--AY-ALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGL-EGPFHHVLLDPPT 290 (393)
T ss_dssp TCEEEEESCTTTHHHHHHHHTT--CE-EEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTC-CCCEEEEEECCCC
T ss_pred CCeEEEcccchhHHHHHHHHcC--Ce-EEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHh-cCCCCEEEECCCc
Confidence 4689999999999999998888 46 99999999999999888632211 222111 1111 2349999999999
No 21
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=97.52 E-value=0.00017 Score=59.54 Aligned_cols=73 Identities=21% Similarity=0.125 Sum_probs=54.4
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCC-ccccccccccccccCCCEEEeCCCCCCCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP-YQAKRKPLSFRCQLLNNQLLRSPSPLLGN 89 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~-~~~~~~~~~~~~~~~~Dll~~g~PCq~fS 89 (278)
..-+|||++||.|.+...+...| ...|.++|+++.+++..+.|.++.. +..+...+. ..+|+++..||-..++
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~d~~~~~----~~~D~v~~~~p~~~~~ 124 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSYLLG--AESVTAFDIDPDAIETAKRNCGGVNFMVADVSEIS----GKYDTWIMNPPFGSVV 124 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHHHTT--BSEEEEEESCHHHHHHHHHHCTTSEEEECCGGGCC----CCEEEEEECCCC----
T ss_pred CCCEEEEEeCCccHHHHHHHHcC--CCEEEEEECCHHHHHHHHHhcCCCEEEECcHHHCC----CCeeEEEECCCchhcc
Confidence 44689999999999999998887 5679999999999999999987322 233322221 4799999999976543
No 22
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=97.52 E-value=6.7e-05 Score=62.66 Aligned_cols=71 Identities=10% Similarity=0.148 Sum_probs=51.4
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCC------ccccccccccccccCCCEEEeCCC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP------YQAKRKPLSFRCQLLNNQLLRSPS 84 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~------~~~~~~~~~~~~~~~~Dll~~g~P 84 (278)
.-+|||++||.|.+++.+...| +..|.++|+++.+++..+.|..... +..+...........+|+++..||
T Consensus 55 ~~~vLDlgcG~G~~~~~l~~~~--~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p 131 (202)
T 2fpo_A 55 DAQCLDCFAGSGALGLEALSRY--AAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPP 131 (202)
T ss_dssp TCEEEETTCTTCHHHHHHHHTT--CSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCS
T ss_pred CCeEEEeCCCcCHHHHHHHhcC--CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCC
Confidence 4689999999999999877777 4689999999999999999874322 122211111112246899999988
No 23
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=97.50 E-value=0.00012 Score=62.26 Aligned_cols=76 Identities=17% Similarity=0.065 Sum_probs=57.7
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCc-------cccccccccccccCCCEEEeCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-------QAKRKPLSFRCQLLNNQLLRSP 83 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~-------~~~~~~~~~~~~~~~Dll~~g~ 83 (278)
...+|||++||.|+++..+...| ..|.++|+++.+++..+.|.....+ ..+..... ....+|+++..+
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~D~v~~~~ 152 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTG---MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA--SFLKADVVFLSP 152 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG--GGCCCSEEEECC
T ss_pred CCCEEEECccccCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc--ccCCCCEEEECC
Confidence 35689999999999999999988 4778999999999999988743222 22211111 235799999999
Q ss_pred CCCCCCcc
Q 023723 84 SPLLGNDD 91 (278)
Q Consensus 84 PCq~fS~a 91 (278)
||...+..
T Consensus 153 ~~~~~~~~ 160 (241)
T 3gdh_A 153 PWGGPDYA 160 (241)
T ss_dssp CCSSGGGG
T ss_pred CcCCcchh
Confidence 99987654
No 24
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=97.43 E-value=0.00013 Score=60.84 Aligned_cols=72 Identities=10% Similarity=0.161 Sum_probs=51.4
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCc--------ccccccc-ccccccC-CCEEEe
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY--------QAKRKPL-SFRCQLL-NNQLLR 81 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~--------~~~~~~~-~~~~~~~-~Dll~~ 81 (278)
.-+|||++||.|++++.+...| ...|.++|+++.+++..+.|...... ..+.... ....... +|+++.
T Consensus 54 ~~~vLDlGcGtG~~~~~~~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 131 (201)
T 2ift_A 54 QSECLDGFAGSGSLGFEALSRQ--AKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFL 131 (201)
T ss_dssp TCEEEETTCTTCHHHHHHHHTT--CSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEE
T ss_pred CCeEEEcCCccCHHHHHHHHcc--CCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEE
Confidence 4589999999999999876667 46899999999999999998743221 2221111 1111246 899999
Q ss_pred CCCC
Q 023723 82 SPSP 85 (278)
Q Consensus 82 g~PC 85 (278)
.||.
T Consensus 132 ~~~~ 135 (201)
T 2ift_A 132 DPPF 135 (201)
T ss_dssp CCCS
T ss_pred CCCC
Confidence 9983
No 25
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=97.38 E-value=0.00023 Score=58.35 Aligned_cols=99 Identities=14% Similarity=0.118 Sum_probs=65.5
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCC------ccccccccc-cccccCCCEEEeCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP------YQAKRKPLS-FRCQLLNNQLLRSP 83 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~------~~~~~~~~~-~~~~~~~Dll~~g~ 83 (278)
..-+|||++||.|.++..+...| ...|.++|+++.+++..+.|..... +..+..... ......+|+++..|
T Consensus 44 ~~~~vLDlgcG~G~~~~~~~~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~ 121 (189)
T 3p9n_A 44 TGLAVLDLYAGSGALGLEALSRG--AASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADP 121 (189)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTT--CSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECC
T ss_pred CCCEEEEeCCCcCHHHHHHHHCC--CCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECC
Confidence 45689999999999999777777 5689999999999999999864321 122211111 11135799999998
Q ss_pred CCCCCCcccccCCCCCCCCchHHHHhh--hcCCc-EEEEE
Q 023723 84 SPLLGNDDMTVITKHDQPDDSWDKLLE--SCDPV-ERFLE 120 (278)
Q Consensus 84 PCq~fS~ag~~~g~~d~r~~l~~~~i~--~~~P~-~~i~E 120 (278)
|.... .+....++..+.+ .++|. .+++|
T Consensus 122 p~~~~---------~~~~~~~l~~~~~~~~L~pgG~l~~~ 152 (189)
T 3p9n_A 122 PYNVD---------SADVDAILAALGTNGWTREGTVAVVE 152 (189)
T ss_dssp CTTSC---------HHHHHHHHHHHHHSSSCCTTCEEEEE
T ss_pred CCCcc---------hhhHHHHHHHHHhcCccCCCeEEEEE
Confidence 84321 0111234555666 68884 66777
No 26
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=97.35 E-value=0.0011 Score=58.57 Aligned_cols=103 Identities=16% Similarity=0.116 Sum_probs=68.7
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCc-------cccccccccccccCC---CEEEe
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-------QAKRKPLSFRCQLLN---NQLLR 81 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~-------~~~~~~~~~~~~~~~---Dll~~ 81 (278)
..+|+|++||.|.+.+.+.... ...|.++|+++.|++.-+.|...... ..+... .. ...+ |+++.
T Consensus 124 ~~~vLDlG~GsG~~~~~la~~~--~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~--~~-~~~f~~~D~Ivs 198 (284)
T 1nv8_A 124 IKTVADIGTGSGAIGVSVAKFS--DAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLE--PF-KEKFASIEMILS 198 (284)
T ss_dssp CCEEEEESCTTSHHHHHHHHHS--SCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTG--GG-GGGTTTCCEEEE
T ss_pred CCEEEEEeCchhHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchh--hc-ccccCCCCEEEE
Confidence 3589999999999999887762 35789999999999999998643222 122111 11 1356 99999
Q ss_pred CCCCCCCCcccccCCC-CCCC---------CchHHHHh-hhcCC-cEEEEE
Q 023723 82 SPSPLLGNDDMTVITK-HDQP---------DDSWDKLL-ESCDP-VERFLE 120 (278)
Q Consensus 82 g~PCq~fS~ag~~~g~-~d~r---------~~l~~~~i-~~~~P-~~~i~E 120 (278)
.|||-+.+. ...... .+++ -.++.+++ +..+| -++++|
T Consensus 199 nPPyi~~~~-~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e 248 (284)
T 1nv8_A 199 NPPYVKSSA-HLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLME 248 (284)
T ss_dssp CCCCBCGGG-SCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEE
T ss_pred cCCCCCccc-ccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEE
Confidence 999987665 211111 1111 13455677 77888 477888
No 27
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=97.26 E-value=0.00067 Score=58.62 Aligned_cols=77 Identities=10% Similarity=0.109 Sum_probs=54.2
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCc-------ccccccccc-ccccCCCEEEeC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-------QAKRKPLSF-RCQLLNNQLLRS 82 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~-------~~~~~~~~~-~~~~~~Dll~~g 82 (278)
..-+|||++||.|.+.+.+...+- ..|.++|+++.+++.-+.|.....+ ..+...... .....+|+++..
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~~--~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~n 126 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRTK--AKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCN 126 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTCC--CEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEEC
T ss_pred CCCEEEEcCCchhHHHHHHHHhcC--CcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEEC
Confidence 456899999999999999988873 4889999999999999888753322 222222111 123579999999
Q ss_pred CCCCCCC
Q 023723 83 PSPLLGN 89 (278)
Q Consensus 83 ~PCq~fS 89 (278)
||+-..+
T Consensus 127 pPy~~~~ 133 (259)
T 3lpm_A 127 PPYFATP 133 (259)
T ss_dssp CCC----
T ss_pred CCCCCCc
Confidence 9987653
No 28
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=97.26 E-value=0.00021 Score=62.70 Aligned_cols=79 Identities=11% Similarity=0.084 Sum_probs=51.4
Q ss_pred CCeEEeeecchhhHHHHHHh--cCCCceEEEEEcCCHHHHHHHHHHcCCCCc------cccccccccc---cccCCCEEE
Q 023723 12 AWRVLEFYSGIGGMRYSLMK--ADVSAQVVEAFDINDKANDVYELNFGHRPY------QAKRKPLSFR---CQLLNNQLL 80 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~--aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~------~~~~~~~~~~---~~~~~Dll~ 80 (278)
.-+|||++||.|+.+..+.. .| ...|.++|+++.+++..+.|.....+ ..+....... ....+|+++
T Consensus 84 g~~VLDlgaG~G~~t~~la~~~~~--~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~Vl 161 (274)
T 3ajd_A 84 DDFILDMCAAPGGKTTHLAQLMKN--KGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDKIL 161 (274)
T ss_dssp TCEEEETTCTTCHHHHHHHHHTTT--CSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred cCEEEEeCCCccHHHHHHHHHcCC--CCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCCEEE
Confidence 45899999999999987765 23 24789999999999999998632211 1221111110 134689999
Q ss_pred eCCCCCCCCccc
Q 023723 81 RSPSPLLGNDDM 92 (278)
Q Consensus 81 ~g~PCq~fS~ag 92 (278)
..+||.++....
T Consensus 162 ~d~Pcs~~g~~~ 173 (274)
T 3ajd_A 162 LDAPCSGNIIKD 173 (274)
T ss_dssp EEECCC------
T ss_pred EcCCCCCCcccc
Confidence 999998866544
No 29
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=97.26 E-value=0.00042 Score=60.73 Aligned_cols=88 Identities=17% Similarity=0.143 Sum_probs=60.9
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCC------ccccccccccccccCCCEEEeCCCC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP------YQAKRKPLSFRCQLLNNQLLRSPSP 85 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~------~~~~~~~~~~~~~~~~Dll~~g~PC 85 (278)
.-+|+|+|||.|.+++.+...+- ...|.++|+++.|++..+.|..... +..+.... .. ...+|+++..||.
T Consensus 120 ~~~VLDlgcG~G~~s~~la~~~~-~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~-~~-~~~~D~Vi~d~p~ 196 (272)
T 3a27_A 120 NEVVVDMFAGIGYFTIPLAKYSK-PKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDV-EL-KDVADRVIMGYVH 196 (272)
T ss_dssp TCEEEETTCTTTTTHHHHHHHTC-CSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGC-CC-TTCEEEEEECCCS
T ss_pred CCEEEEecCcCCHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHc-Cc-cCCceEEEECCcc
Confidence 45899999999999998877641 2478999999999999998874322 12222222 11 3468999999984
Q ss_pred CCCCcccccCCCCCCCCchHHHHhhhcCCcE
Q 023723 86 LLGNDDMTVITKHDQPDDSWDKLLESCDPVE 116 (278)
Q Consensus 86 q~fS~ag~~~g~~d~r~~l~~~~i~~~~P~~ 116 (278)
....++..+++.++|.-
T Consensus 197 --------------~~~~~l~~~~~~LkpgG 213 (272)
T 3a27_A 197 --------------KTHKFLDKTFEFLKDRG 213 (272)
T ss_dssp --------------SGGGGHHHHHHHEEEEE
T ss_pred --------------cHHHHHHHHHHHcCCCC
Confidence 11235666777788853
No 30
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=97.19 E-value=0.00085 Score=60.07 Aligned_cols=80 Identities=14% Similarity=0.107 Sum_probs=54.8
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCC---C---ccccccccccccccCCCEEEeCCCC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHR---P---YQAKRKPLSFRCQLLNNQLLRSPSP 85 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~---~---~~~~~~~~~~~~~~~~Dll~~g~PC 85 (278)
.-+|||++||.|+.+..+....-+--.|.++|+++.+++..+.|.... . +..+...... ....+|+++..+||
T Consensus 119 g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~-~~~~fD~Il~d~Pc 197 (315)
T 1ixk_A 119 GEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGE-LNVEFDKILLDAPC 197 (315)
T ss_dssp TCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGG-GCCCEEEEEEECCT
T ss_pred CCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhccc-ccccCCEEEEeCCC
Confidence 458999999999999887654211237899999999999988886321 1 1222222211 12469999999999
Q ss_pred CCCCccc
Q 023723 86 LLGNDDM 92 (278)
Q Consensus 86 q~fS~ag 92 (278)
.+.....
T Consensus 198 sg~g~~~ 204 (315)
T 1ixk_A 198 TGSGTIH 204 (315)
T ss_dssp TSTTTCC
T ss_pred CCccccc
Confidence 8766544
No 31
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=97.19 E-value=0.00027 Score=70.34 Aligned_cols=119 Identities=12% Similarity=0.006 Sum_probs=70.7
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCc--------cccccccccccccCCCEEEeCC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY--------QAKRKPLSFRCQLLNNQLLRSP 83 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~--------~~~~~~~~~~~~~~~Dll~~g~ 83 (278)
.-+|||||||.|++++.+-..| ...|.++|+++.|++.-+.|.....+ ..|....-......+|+|+.-|
T Consensus 540 g~~VLDlg~GtG~~sl~aa~~g--a~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DP 617 (703)
T 3v97_A 540 GKDFLNLFSYTGSATVHAGLGG--ARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDP 617 (703)
T ss_dssp TCEEEEESCTTCHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECC
T ss_pred CCcEEEeeechhHHHHHHHHCC--CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECC
Confidence 4589999999999999988888 57899999999999999998743222 1221111111124799999999
Q ss_pred CCCCCCcccccCCCCCC---CCchHHHHhhhcCCc-EEEEE--eCCCc--cchhhccCc
Q 023723 84 SPLLGNDDMTVITKHDQ---PDDSWDKLLESCDPV-ERFLE--FSNSG--DQVNTETGF 134 (278)
Q Consensus 84 PCq~fS~ag~~~g~~d~---r~~l~~~~i~~~~P~-~~i~E--v~~~~--~~~l~~~GY 134 (278)
||-.-|... .+..+. -..++....+.++|. .++++ -.... .+.|++.||
T Consensus 618 P~f~~~~~~--~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~~~~~~~~~l~~~g~ 674 (703)
T 3v97_A 618 PTFSNSKRM--EDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGL 674 (703)
T ss_dssp CSBC---------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCTTCCCCHHHHHHTTE
T ss_pred ccccCCccc--hhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCcccccCHHHHHHcCC
Confidence 994433221 111110 012333455568885 44555 11111 555555555
No 32
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=97.14 E-value=0.00043 Score=63.36 Aligned_cols=42 Identities=24% Similarity=0.311 Sum_probs=36.8
Q ss_pred CeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcC
Q 023723 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG 57 (278)
Q Consensus 13 ~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~ 57 (278)
-+|+|||||.|.+++.+...+ ..|.++|+++.|++..+.|..
T Consensus 215 ~~vLDl~cG~G~~~l~la~~~---~~V~gvd~~~~ai~~a~~n~~ 256 (369)
T 3bt7_A 215 GDLLELYCGNGNFSLALARNF---DRVLATEIAKPSVAAAQYNIA 256 (369)
T ss_dssp SEEEEESCTTSHHHHHHGGGS---SEEEEECCCHHHHHHHHHHHH
T ss_pred CEEEEccCCCCHHHHHHHhcC---CEEEEEECCHHHHHHHHHHHH
Confidence 479999999999999887643 688999999999999998864
No 33
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=97.14 E-value=0.00028 Score=65.12 Aligned_cols=76 Identities=12% Similarity=0.184 Sum_probs=53.3
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCc--------cccccc-cccc--cccCCCEEE
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY--------QAKRKP-LSFR--CQLLNNQLL 80 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~--------~~~~~~-~~~~--~~~~~Dll~ 80 (278)
.-+|||+|||.|++++.+...| ...|.++|+++.|++.-+.|.....+ ..+... +... ....+|+++
T Consensus 213 ~~~VLDl~cGtG~~sl~la~~g--a~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii 290 (385)
T 2b78_A 213 GKTVLNLFSYTAAFSVAAAMGG--AMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIII 290 (385)
T ss_dssp TCEEEEETCTTTHHHHHHHHTT--BSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CCeEEEEeeccCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEE
Confidence 3589999999999999998878 56899999999999999988742222 222111 1111 123699999
Q ss_pred eCCCCCCCC
Q 023723 81 RSPSPLLGN 89 (278)
Q Consensus 81 ~g~PCq~fS 89 (278)
.-||+-..|
T Consensus 291 ~DPP~~~~~ 299 (385)
T 2b78_A 291 IDPPSFARN 299 (385)
T ss_dssp ECCCCC---
T ss_pred ECCCCCCCC
Confidence 999985433
No 34
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=97.11 E-value=0.00068 Score=61.27 Aligned_cols=83 Identities=18% Similarity=0.261 Sum_probs=58.8
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCc-------cccccccccccccCCCEEEeCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-------QAKRKPLSFRCQLLNNQLLRSP 83 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~-------~~~~~~~~~~~~~~~Dll~~g~ 83 (278)
..-+|+|+|||.|++++. .. | ...|.++|+++.|++..+.|.....+ ..+..... ..+|+++..|
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~-~--~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~----~~fD~Vi~dp 266 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CK-N--AKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD----VKGNRVIMNL 266 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TT-T--SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC----CCEEEEEECC
T ss_pred CCCEEEEccCccCHHHHh-cc-C--CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc----CCCcEEEECC
Confidence 345899999999999988 55 5 46899999999999999998643222 12211111 5799999998
Q ss_pred CCCCCCcccccCCCCCCCCchHHHHhhhcCCc
Q 023723 84 SPLLGNDDMTVITKHDQPDDSWDKLLESCDPV 115 (278)
Q Consensus 84 PCq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~ 115 (278)
|.... .++..+.+..+|.
T Consensus 267 P~~~~--------------~~l~~~~~~L~~g 284 (336)
T 2yx1_A 267 PKFAH--------------KFIDKALDIVEEG 284 (336)
T ss_dssp TTTGG--------------GGHHHHHHHEEEE
T ss_pred cHhHH--------------HHHHHHHHHcCCC
Confidence 85321 4555667777774
No 35
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=97.10 E-value=0.00046 Score=55.68 Aligned_cols=73 Identities=15% Similarity=0.145 Sum_probs=52.6
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCc-------cccccccccccccCCCEEEeCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-------QAKRKPLSFRCQLLNNQLLRSP 83 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~-------~~~~~~~~~~~~~~~Dll~~g~ 83 (278)
..-+|||++||.|.+...+...| ...|.++|+++.+++..+.|...... ..+...........+|+++..+
T Consensus 31 ~~~~vLDlGcG~G~~~~~l~~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~ 108 (177)
T 2esr_A 31 NGGRVLDLFAGSGGLAIEAVSRG--MSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDP 108 (177)
T ss_dssp CSCEEEEETCTTCHHHHHHHHTT--CCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECC
T ss_pred CCCeEEEeCCCCCHHHHHHHHcC--CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECC
Confidence 34689999999999999888877 46889999999999999998754322 1221111011124589999998
Q ss_pred CC
Q 023723 84 SP 85 (278)
Q Consensus 84 PC 85 (278)
|.
T Consensus 109 ~~ 110 (177)
T 2esr_A 109 PY 110 (177)
T ss_dssp SS
T ss_pred CC
Confidence 74
No 36
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=97.06 E-value=0.0014 Score=62.25 Aligned_cols=82 Identities=9% Similarity=-0.006 Sum_probs=55.0
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCC---C---ccccccccccccccCCCEEEeCCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHR---P---YQAKRKPLSFRCQLLNNQLLRSPS 84 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~---~---~~~~~~~~~~~~~~~~Dll~~g~P 84 (278)
..-+|||+|||.||.++-+-..--+--.|.|+|+++.+++..+.|.... . ...+...+.......+|+|+.-+|
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~P 196 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAP 196 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEECC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCEEEECCC
Confidence 3468999999999999877653100137899999999999999986321 1 122222111111246999999999
Q ss_pred CCCCCccc
Q 023723 85 PLLGNDDM 92 (278)
Q Consensus 85 Cq~fS~ag 92 (278)
|.+.....
T Consensus 197 cSg~G~~~ 204 (479)
T 2frx_A 197 CSGEGVVR 204 (479)
T ss_dssp CCCGGGGG
T ss_pred cCCccccc
Confidence 98765443
No 37
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=97.04 E-value=0.00047 Score=63.86 Aligned_cols=72 Identities=15% Similarity=0.044 Sum_probs=50.3
Q ss_pred CCeEEeeecchhhHHHHHHh--cCCCceEEEEEcCCHHHHHHHHHHcCCCCccc--------ccccccc-ccccCCCEEE
Q 023723 12 AWRVLEFYSGIGGMRYSLMK--ADVSAQVVEAFDINDKANDVYELNFGHRPYQA--------KRKPLSF-RCQLLNNQLL 80 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~--aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~~~--------~~~~~~~-~~~~~~Dll~ 80 (278)
.-+|||+|||.|++++-+-. .| ...|+++|+++.|++..+.|.....+.+ |...+-. .....+|+|+
T Consensus 53 g~~VLDlfaGtG~~sl~aa~~~~g--a~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~ 130 (392)
T 3axs_A 53 PVKVADPLSASGIRAIRFLLETSC--VEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVD 130 (392)
T ss_dssp CEEEEESSCTTSHHHHHHHHHCSC--EEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEE
T ss_pred CCEEEECCCcccHHHHHHHHhCCC--CCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEE
Confidence 46899999999999886554 35 4789999999999999999975333221 2111100 1123689999
Q ss_pred eCCCC
Q 023723 81 RSPSP 85 (278)
Q Consensus 81 ~g~PC 85 (278)
.-|+|
T Consensus 131 lDP~g 135 (392)
T 3axs_A 131 LDPFG 135 (392)
T ss_dssp ECCSS
T ss_pred ECCCc
Confidence 99865
No 38
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=97.01 E-value=0.00056 Score=64.73 Aligned_cols=83 Identities=16% Similarity=0.007 Sum_probs=55.6
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCC-----ccccccccccccccCCCEEEeCCCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP-----YQAKRKPLSFRCQLLNNQLLRSPSP 85 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~-----~~~~~~~~~~~~~~~~Dll~~g~PC 85 (278)
..-+|||+|||.||.++.+-..--+--.|.|+|+++.+++..+.|..... ...+...+.......+|+|+.-+||
T Consensus 101 ~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~Da~~l~~~~~~~FD~Il~D~Pc 180 (464)
T 3m6w_A 101 PGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAPLAVTQAPPRALAEAFGTYFHRVLLDAPC 180 (464)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCCCEEECSCHHHHHHHHCSCEEEEEEECCC
T ss_pred CCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCeEEEEECCHHHhhhhccccCCEEEECCCc
Confidence 35689999999999998876431001278999999999999999864221 1222111111113469999999999
Q ss_pred CCCCcccc
Q 023723 86 LLGNDDMT 93 (278)
Q Consensus 86 q~fS~ag~ 93 (278)
.+.....+
T Consensus 181 Sg~G~~rr 188 (464)
T 3m6w_A 181 SGEGMFRK 188 (464)
T ss_dssp CCGGGTTT
T ss_pred CCcccccc
Confidence 87655443
No 39
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=96.96 E-value=0.004 Score=50.18 Aligned_cols=111 Identities=17% Similarity=0.110 Sum_probs=68.2
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCC-ccccccccccccccCCCEEEeCCCCCCCCc
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP-YQAKRKPLSFRCQLLNNQLLRSPSPLLGND 90 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~-~~~~~~~~~~~~~~~~Dll~~g~PCq~fS~ 90 (278)
.-+|||+.||.|.+...+...+ .|.++|+++.+++. .++.. ...+... ......+|++++.||-...+.
T Consensus 24 ~~~vLD~GcG~G~~~~~l~~~~----~v~gvD~s~~~~~~----~~~~~~~~~d~~~--~~~~~~fD~i~~n~~~~~~~~ 93 (170)
T 3q87_B 24 MKIVLDLGTSTGVITEQLRKRN----TVVSTDLNIRALES----HRGGNLVRADLLC--SINQESVDVVVFNPPYVPDTD 93 (170)
T ss_dssp SCEEEEETCTTCHHHHHHTTTS----EEEEEESCHHHHHT----CSSSCEEECSTTT--TBCGGGCSEEEECCCCBTTCC
T ss_pred CCeEEEeccCccHHHHHHHhcC----cEEEEECCHHHHhc----ccCCeEEECChhh--hcccCCCCEEEECCCCccCCc
Confidence 3499999999999999998876 78999999999988 22222 2233221 122257999999988665443
Q ss_pred ccccCCCCCCCCchHHHHhhhcCCc-EEEEE-eC--CCc--cchhhccCc
Q 023723 91 DMTVITKHDQPDDSWDKLLESCDPV-ERFLE-FS--NSG--DQVNTETGF 134 (278)
Q Consensus 91 ag~~~g~~d~r~~l~~~~i~~~~P~-~~i~E-v~--~~~--~~~l~~~GY 134 (278)
.....+.. ....++.++++.. |. .+++. .. ... .+.|++.||
T Consensus 94 ~~~~~~~~-~~~~~~~~~~~~l-pgG~l~~~~~~~~~~~~l~~~l~~~gf 141 (170)
T 3q87_B 94 DPIIGGGY-LGREVIDRFVDAV-TVGMLYLLVIEANRPKEVLARLEERGY 141 (170)
T ss_dssp CTTTBCCG-GGCHHHHHHHHHC-CSSEEEEEEEGGGCHHHHHHHHHHTTC
T ss_pred cccccCCc-chHHHHHHHHhhC-CCCEEEEEEecCCCHHHHHHHHHHCCC
Confidence 32211111 1123555677767 74 34443 22 111 566677787
No 40
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=96.93 E-value=0.00099 Score=59.67 Aligned_cols=81 Identities=14% Similarity=0.009 Sum_probs=51.9
Q ss_pred CCeEEeeecchhhHHHHHHhc-CCCceEEEEEcCCHHHHHHHHHHcCCCCc------cccccccccc--cccCCCEEEeC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFGHRPY------QAKRKPLSFR--CQLLNNQLLRS 82 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~a-G~~~~~v~a~e~~~~a~~~y~~N~~~~~~------~~~~~~~~~~--~~~~~Dll~~g 82 (278)
.-+|||+|||.||.++.+-.. +- --.|+|+|+++.+++..+.|.....+ ..+...+... ....+|.|+.-
T Consensus 103 g~~VLDlcaG~G~kt~~la~~~~~-~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~~fD~Vl~D 181 (309)
T 2b9e_A 103 GSHVIDACAAPGNKTSHLAALLKN-QGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVHYILLD 181 (309)
T ss_dssp TCEEEESSCTTCHHHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCGGGTTEEEEEEC
T ss_pred CCEEEEeCCChhHHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCccccccCCCCEEEEc
Confidence 458999999999999876553 10 13789999999999999998642211 2221111111 12468999999
Q ss_pred CCCCCCCcccc
Q 023723 83 PSPLLGNDDMT 93 (278)
Q Consensus 83 ~PCq~fS~ag~ 93 (278)
+||.+.-...+
T Consensus 182 ~PcSg~G~~~r 192 (309)
T 2b9e_A 182 PSCSGSGMPSR 192 (309)
T ss_dssp CCCCC------
T ss_pred CCcCCCCCCcc
Confidence 99987655443
No 41
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=96.92 E-value=0.00065 Score=54.93 Aligned_cols=72 Identities=18% Similarity=0.159 Sum_probs=50.8
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCC-------cccccccccc-c--cccCCCEEE
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP-------YQAKRKPLSF-R--CQLLNNQLL 80 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~-------~~~~~~~~~~-~--~~~~~Dll~ 80 (278)
..-+|||++||.|.+...+...+ ...|.++|+++.+++..+.|..... +..+...... . ....+|+++
T Consensus 44 ~~~~vLD~GcG~G~~~~~~~~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~ 121 (187)
T 2fhp_A 44 DGGMALDLYSGSGGLAIEAVSRG--MDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVL 121 (187)
T ss_dssp SSCEEEETTCTTCHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CCCCEEEeCCccCHHHHHHHHcC--CCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEE
Confidence 34699999999999999777766 4689999999999999888864221 1222111100 0 134789999
Q ss_pred eCCC
Q 023723 81 RSPS 84 (278)
Q Consensus 81 ~g~P 84 (278)
..+|
T Consensus 122 ~~~~ 125 (187)
T 2fhp_A 122 LDPP 125 (187)
T ss_dssp ECCC
T ss_pred ECCC
Confidence 9887
No 42
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=96.92 E-value=0.00063 Score=55.25 Aligned_cols=102 Identities=15% Similarity=0.093 Sum_probs=59.7
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCC-----C-ccccccccccccccCCCEEEeCCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHR-----P-YQAKRKPLSFRCQLLNNQLLRSPS 84 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~-----~-~~~~~~~~~~~~~~~~Dll~~g~P 84 (278)
..-+|||+.||.|.++..+...+ ..|.++|+++.+++.-++|.... . ..++...+.......+|+++..++
T Consensus 22 ~~~~vLDiGcG~G~~~~~la~~~---~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~ 98 (185)
T 3mti_A 22 DESIVVDATMGNGNDTAFLAGLS---KKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNLG 98 (185)
T ss_dssp TTCEEEESCCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC
T ss_pred CCCEEEEEcCCCCHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCC
Confidence 34689999999999999998876 47899999999999888876421 1 122222221122346999988754
Q ss_pred CCCCCcccccCCCCCCCCchHHHHhhhcCCcE
Q 023723 85 PLLGNDDMTVITKHDQPDDSWDKLLESCDPVE 116 (278)
Q Consensus 85 Cq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~~ 116 (278)
.-+.+...... ..+.....+.++.+.++|.-
T Consensus 99 ~~~~~~~~~~~-~~~~~~~~l~~~~~~LkpgG 129 (185)
T 3mti_A 99 YLPSADKSVIT-KPHTTLEAIEKILDRLEVGG 129 (185)
T ss_dssp ------------CHHHHHHHHHHHHHHEEEEE
T ss_pred CCCCcchhccc-ChhhHHHHHHHHHHhcCCCc
Confidence 43322111100 00111234455677789953
No 43
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=96.91 E-value=0.00085 Score=53.32 Aligned_cols=95 Identities=13% Similarity=0.066 Sum_probs=62.5
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCC----C-ccccccc-ccccc--ccCCCEEEeC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHR----P-YQAKRKP-LSFRC--QLLNNQLLRS 82 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~----~-~~~~~~~-~~~~~--~~~~Dll~~g 82 (278)
..-+|+|++||.|.+...+...| .+ |.++|+++.+++..+.|.... . +..+... ..... ...+|+++..
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~--~~-v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~ 117 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEG--WE-AVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMA 117 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTT--CE-EEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEeCCCcCHHHHHHHHCC--Ce-EEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEEC
Confidence 34589999999999999999988 35 999999999999998887422 1 2222211 11111 1269999999
Q ss_pred CCCCCCCcccccCCCCCCCCchHHHHh--hhcCCc-EEEEE
Q 023723 83 PSPLLGNDDMTVITKHDQPDDSWDKLL--ESCDPV-ERFLE 120 (278)
Q Consensus 83 ~PCq~fS~ag~~~g~~d~r~~l~~~~i--~~~~P~-~~i~E 120 (278)
+|.. + .....+..+. +.++|. .++++
T Consensus 118 ~~~~-----~-------~~~~~~~~~~~~~~L~~gG~~~~~ 146 (171)
T 1ws6_A 118 PPYA-----M-------DLAALFGELLASGLVEAGGLYVLQ 146 (171)
T ss_dssp CCTT-----S-------CTTHHHHHHHHHTCEEEEEEEEEE
T ss_pred CCCc-----h-------hHHHHHHHHHhhcccCCCcEEEEE
Confidence 8853 1 1113444455 667884 55566
No 44
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=96.90 E-value=0.00084 Score=61.92 Aligned_cols=103 Identities=13% Similarity=-0.025 Sum_probs=64.9
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCcc-------cccccc-ccc--cccCCCEEE
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQ-------AKRKPL-SFR--CQLLNNQLL 80 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~~-------~~~~~~-~~~--~~~~~Dll~ 80 (278)
..-+|||+|||.|++++.+...| ...|.++|+++.+++..+.|.....+. .+.... ... ....+|+++
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g--~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi 294 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAG--ADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVV 294 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHCC--CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEE
Confidence 34689999999999999998887 568999999999999999987532221 121111 100 124799999
Q ss_pred eCCCCCCCCcccccCCCCCCCCchHHHHhhhcCCcE
Q 023723 81 RSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVE 116 (278)
Q Consensus 81 ~g~PCq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~~ 116 (278)
..||+-..|........ .....++.+.++.++|.-
T Consensus 295 ~dpP~~~~~~~~~~~~~-~~~~~~l~~~~~~LkpgG 329 (396)
T 2as0_A 295 LDPPAFVQHEKDLKAGL-RAYFNVNFAGLNLVKDGG 329 (396)
T ss_dssp ECCCCSCSSGGGHHHHH-HHHHHHHHHHHTTEEEEE
T ss_pred ECCCCCCCCHHHHHHHH-HHHHHHHHHHHHhcCCCc
Confidence 99997554432111000 001123344555688854
No 45
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=96.90 E-value=0.00082 Score=63.46 Aligned_cols=81 Identities=11% Similarity=0.014 Sum_probs=54.6
Q ss_pred CCCeEEeeecchhhHHHHHHhc-CCCceEEEEEcCCHHHHHHHHHHcCCCCc------cccccccccccccCCCEEEeCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFGHRPY------QAKRKPLSFRCQLLNNQLLRSP 83 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~a-G~~~~~v~a~e~~~~a~~~y~~N~~~~~~------~~~~~~~~~~~~~~~Dll~~g~ 83 (278)
..-+|||+|||.||.++.+-.. +- --.|.|+|+++.+++..+.|.....+ ..+...+.......+|+|+.-+
T Consensus 105 ~g~~VLDlcaGpGgkt~~lA~~~~~-~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~~FD~Il~Da 183 (456)
T 3m4x_A 105 PGEKVLDLCAAPGGKSTQLAAQMKG-KGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSGFFDRIVVDA 183 (456)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHHTT-CSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTTCEEEEEEEC
T ss_pred CCCEEEEECCCcCHHHHHHHHHcCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhccccCCEEEECC
Confidence 3468999999999998877543 10 13789999999999999998632211 1221111111124699999999
Q ss_pred CCCCCCccc
Q 023723 84 SPLLGNDDM 92 (278)
Q Consensus 84 PCq~fS~ag 92 (278)
||.+.-...
T Consensus 184 PCSg~G~~r 192 (456)
T 3m4x_A 184 PCSGEGMFR 192 (456)
T ss_dssp CCCCGGGTT
T ss_pred CCCCccccc
Confidence 998765443
No 46
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=96.88 E-value=0.00039 Score=63.92 Aligned_cols=75 Identities=20% Similarity=0.092 Sum_probs=52.9
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCc------ccccccc-ccc--cccCCCEEEeC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY------QAKRKPL-SFR--CQLLNNQLLRS 82 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~------~~~~~~~-~~~--~~~~~Dll~~g 82 (278)
.-+|||+|||.|++++.+...+ ..|.++|+++.+++.-+.|.....+ ..+.... ... ....+|+++..
T Consensus 210 ~~~VLDlg~G~G~~~~~la~~~---~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~d 286 (382)
T 1wxx_A 210 GERALDVFSYAGGFALHLALGF---REVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLD 286 (382)
T ss_dssp EEEEEEETCTTTHHHHHHHHHE---EEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCeEEEeeeccCHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEEC
Confidence 3589999999999999887763 6889999999999999998642221 2221111 100 12468999999
Q ss_pred CCCCCCC
Q 023723 83 PSPLLGN 89 (278)
Q Consensus 83 ~PCq~fS 89 (278)
||+-..|
T Consensus 287 pP~~~~~ 293 (382)
T 1wxx_A 287 PPAFAKG 293 (382)
T ss_dssp CCCSCCS
T ss_pred CCCCCCC
Confidence 9975544
No 47
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=96.88 E-value=0.002 Score=54.07 Aligned_cols=77 Identities=12% Similarity=0.002 Sum_probs=53.1
Q ss_pred CCCeEEeeecc-hhhHHHHHHhc-CCCceEEEEEcCCHHHHHHHHHHcCCCC-----ccccccccccccccCCCEEEeCC
Q 023723 11 EAWRVLEFYSG-IGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFGHRP-----YQAKRKPLSFRCQLLNNQLLRSP 83 (278)
Q Consensus 11 ~~~~v~dLFsG-~Gg~~~gl~~a-G~~~~~v~a~e~~~~a~~~y~~N~~~~~-----~~~~~~~~~~~~~~~~Dll~~g~ 83 (278)
..-+|||++|| .|.++..+... + ..|.++|+++.+++.-+.|..... +..+...........+|+++..|
T Consensus 55 ~~~~vLDlG~G~~G~~~~~la~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~np 131 (230)
T 3evz_A 55 GGEVALEIGTGHTAMMALMAEKFFN---CKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAP 131 (230)
T ss_dssp SSCEEEEECCTTTCHHHHHHHHHHC---CEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECC
T ss_pred CCCEEEEcCCCHHHHHHHHHHHhcC---CEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEECC
Confidence 35699999999 99999988877 4 478999999999999888864322 12221111222236799999999
Q ss_pred CCCCCCc
Q 023723 84 SPLLGND 90 (278)
Q Consensus 84 PCq~fS~ 90 (278)
|+-..+.
T Consensus 132 p~~~~~~ 138 (230)
T 3evz_A 132 PYYDKPL 138 (230)
T ss_dssp CCC----
T ss_pred CCcCCcc
Confidence 9866543
No 48
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=96.83 E-value=0.0016 Score=60.90 Aligned_cols=68 Identities=24% Similarity=0.289 Sum_probs=50.2
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCC-----ccccccccccccccCCCEEEeCCCC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP-----YQAKRKPLSFRCQLLNNQLLRSPSP 85 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~-----~~~~~~~~~~~~~~~~Dll~~g~PC 85 (278)
.-+|+|||||.|.+++.+...+ ..|.++|+++.|++..+.|..... +..+..... ...+|+++..||.
T Consensus 291 ~~~VLDlgcG~G~~sl~la~~~---~~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~d~~~~~---~~~fD~Vv~dPPr 363 (425)
T 2jjq_A 291 GEKILDMYSGVGTFGIYLAKRG---FNVKGFDSNEFAIEMARRNVEINNVDAEFEVASDREVS---VKGFDTVIVDPPR 363 (425)
T ss_dssp SSEEEEETCTTTHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHHTCCEEEEECCTTTCC---CTTCSEEEECCCT
T ss_pred CCEEEEeeccchHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHHcCCcEEEEECChHHcC---ccCCCEEEEcCCc
Confidence 4589999999999999988776 478999999999999888864211 122222111 1169999999985
No 49
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=96.73 E-value=0.0022 Score=54.90 Aligned_cols=47 Identities=15% Similarity=0.053 Sum_probs=37.7
Q ss_pred CCCeEEeeecchhhHHHHHHhc--CCCceEEEEEcCCHHHHHHHHHHcCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKA--DVSAQVVEAFDINDKANDVYELNFGH 58 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~a--G~~~~~v~a~e~~~~a~~~y~~N~~~ 58 (278)
...+|+|++||.|.+.+.+... .. ...|.++|+++.+++.-+.|...
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~-~~~v~gvDis~~~l~~A~~~~~~ 99 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRS-LRQVIASDVDPAPLELAAKNLAL 99 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGG-EEEEEEEESCHHHHHHHHHHHHT
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccC-CCeEEEEECCHHHHHHHHHHHHH
Confidence 4579999999999999887665 21 25789999999999988877543
No 50
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=96.71 E-value=0.0035 Score=54.28 Aligned_cols=77 Identities=9% Similarity=0.056 Sum_probs=53.7
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCC---CCcc-------ccccccc------ccccc
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH---RPYQ-------AKRKPLS------FRCQL 74 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~---~~~~-------~~~~~~~------~~~~~ 74 (278)
..-+|||++||.|.+.+.+...+- ...|.++|+++.+++.-+.|... ..+. .+..... .....
T Consensus 36 ~~~~VLDlG~G~G~~~l~la~~~~-~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~ 114 (260)
T 2ozv_A 36 RACRIADLGAGAGAAGMAVAARLE-KAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDE 114 (260)
T ss_dssp SCEEEEECCSSSSHHHHHHHHHCT-TEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTT
T ss_pred CCCEEEEeCChHhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCC
Confidence 346899999999999988877642 25789999999999999999876 3322 2222110 01234
Q ss_pred CCCEEEeCCCCCCC
Q 023723 75 LNNQLLRSPSPLLG 88 (278)
Q Consensus 75 ~~Dll~~g~PCq~f 88 (278)
.+|+++..||.-..
T Consensus 115 ~fD~Vv~nPPy~~~ 128 (260)
T 2ozv_A 115 HFHHVIMNPPYNDA 128 (260)
T ss_dssp CEEEEEECCCC---
T ss_pred CcCEEEECCCCcCC
Confidence 69999999998654
No 51
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=96.68 E-value=0.0021 Score=56.43 Aligned_cols=68 Identities=18% Similarity=0.201 Sum_probs=52.3
Q ss_pred eEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCC---ccccccccccccccCCCEEEeCCC
Q 023723 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP---YQAKRKPLSFRCQLLNNQLLRSPS 84 (278)
Q Consensus 14 ~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~---~~~~~~~~~~~~~~~~Dll~~g~P 84 (278)
+|||+-||.|.++..+...| ..|.++|+|+..++..+.|++... +..|....+..+...+|.+++.+|
T Consensus 49 ~VLEIG~G~G~lt~~L~~~~---~~V~avEid~~~~~~l~~~~~~~~v~vi~~D~l~~~~~~~~~~~~iv~NlP 119 (271)
T 3fut_A 49 PVFEVGPGLGALTRALLEAG---AEVTAIEKDLRLRPVLEETLSGLPVRLVFQDALLYPWEEVPQGSLLVANLP 119 (271)
T ss_dssp CEEEECCTTSHHHHHHHHTT---CCEEEEESCGGGHHHHHHHTTTSSEEEEESCGGGSCGGGSCTTEEEEEEEC
T ss_pred eEEEEeCchHHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcCCCCEEEEECChhhCChhhccCccEEEecCc
Confidence 89999999999999998888 468999999999999999987532 234433333322235788888887
No 52
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=96.62 E-value=0.001 Score=61.22 Aligned_cols=44 Identities=23% Similarity=0.122 Sum_probs=36.7
Q ss_pred CCeEEeeecchhhHHHHHHhc-CCCceEEEEEcCCHHHHHHHHHHcC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFG 57 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~a-G~~~~~v~a~e~~~~a~~~y~~N~~ 57 (278)
..+|||+|||.|++++.+-.. | ...|+++|+++.|++.-+.|..
T Consensus 48 ~~~VLDl~aGtG~~~l~~a~~~~--~~~V~avDi~~~av~~a~~N~~ 92 (378)
T 2dul_A 48 PKIVLDALSATGIRGIRFALETP--AEEVWLNDISEDAYELMKRNVM 92 (378)
T ss_dssp CSEEEESSCTTSHHHHHHHHHSS--CSEEEEEESCHHHHHHHHHHHH
T ss_pred CCEEEECCCchhHHHHHHHHhCC--CCeEEEEECCHHHHHHHHHHHH
Confidence 468999999999999887664 4 2358999999999999998863
No 53
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=96.59 E-value=0.0033 Score=54.73 Aligned_cols=77 Identities=17% Similarity=0.160 Sum_probs=54.6
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCC-----C-ccccccccccccccCCCEEEeCCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHR-----P-YQAKRKPLSFRCQLLNNQLLRSPS 84 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~-----~-~~~~~~~~~~~~~~~~Dll~~g~P 84 (278)
...+|+|++||.|.+...+...- +...|.++|+++.+++.-+.|.... . ...+... ......+|+++..||
T Consensus 109 ~~~~vLDlG~GsG~~~~~la~~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~--~~~~~~fD~Iv~npP 185 (276)
T 2b3t_A 109 QPCRILDLGTGTGAIALALASER-PDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFS--ALAGQQFAMIVSNPP 185 (276)
T ss_dssp SCCEEEEETCTTSHHHHHHHHHC-TTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTG--GGTTCCEEEEEECCC
T ss_pred CCCEEEEecCCccHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhh--hcccCCccEEEECCC
Confidence 35699999999999998887542 1247899999999999999886321 1 1222211 111347999999999
Q ss_pred CCCCCc
Q 023723 85 PLLGND 90 (278)
Q Consensus 85 Cq~fS~ 90 (278)
|.+.+.
T Consensus 186 y~~~~~ 191 (276)
T 2b3t_A 186 YIDEQD 191 (276)
T ss_dssp CBCTTC
T ss_pred CCCccc
Confidence 987654
No 54
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=96.57 E-value=0.003 Score=59.03 Aligned_cols=72 Identities=15% Similarity=0.173 Sum_probs=51.5
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCC------ccccccc-ccc--ccccCCCEEEeC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP------YQAKRKP-LSF--RCQLLNNQLLRS 82 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~------~~~~~~~-~~~--~~~~~~Dll~~g 82 (278)
.-+|+||+||.|.+++.+...+ ..|.++|+++.|++.-+.|..... +..+... +.. .....+|+++.-
T Consensus 287 ~~~VLDlgcG~G~~~~~la~~~---~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv~d 363 (433)
T 1uwv_A 287 EDRVLDLFCGMGNFTLPLATQA---ASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLD 363 (433)
T ss_dssp TCEEEEESCTTTTTHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEEC
T ss_pred CCEEEECCCCCCHHHHHHHhhC---CEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhcCCCCEEEEC
Confidence 4589999999999999998875 578999999999999988863221 1222211 111 112369999999
Q ss_pred CCCC
Q 023723 83 PSPL 86 (278)
Q Consensus 83 ~PCq 86 (278)
||..
T Consensus 364 PPr~ 367 (433)
T 1uwv_A 364 PARA 367 (433)
T ss_dssp CCTT
T ss_pred CCCc
Confidence 9953
No 55
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=96.56 E-value=0.0021 Score=52.88 Aligned_cols=78 Identities=18% Similarity=0.101 Sum_probs=43.4
Q ss_pred CCCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCc-----ccccccccccc-----ccCCCEE
Q 023723 10 GEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-----QAKRKPLSFRC-----QLLNNQL 79 (278)
Q Consensus 10 ~~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~-----~~~~~~~~~~~-----~~~~Dll 79 (278)
....+|||+.||.|.+...+...+- ...+.++|+++.+++.-+.|...... ..+... ... ...+|++
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~fD~i 105 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACP-GVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIE--WLIERAERGRPWHAI 105 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCT-TEEEEEEECC-------------------CCHHHHHH--HHHHHHHTTCCBSEE
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHh--hhhhhhhccCcccEE
Confidence 4567999999999999999888742 24789999999999999888764321 122111 112 2679999
Q ss_pred EeCCCCCCCCc
Q 023723 80 LRSPSPLLGND 90 (278)
Q Consensus 80 ~~g~PCq~fS~ 90 (278)
++.||+-....
T Consensus 106 ~~npp~~~~~~ 116 (215)
T 4dzr_A 106 VSNPPYIPTGE 116 (215)
T ss_dssp EECCCCCC---
T ss_pred EECCCCCCCcc
Confidence 99999865443
No 56
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=96.54 E-value=0.0083 Score=50.40 Aligned_cols=105 Identities=19% Similarity=0.106 Sum_probs=72.5
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCC-cccccccccccc-ccCCCEEEeCCCCCCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP-YQAKRKPLSFRC-QLLNNQLLRSPSPLLG 88 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~-~~~~~~~~~~~~-~~~~Dll~~g~PCq~f 88 (278)
...+|||+.||.|.+...+...| ..|.++|+++.+++..+.|.++.. ...+........ ...+|+++..
T Consensus 48 ~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~------ 118 (226)
T 3m33_A 48 PQTRVLEAGCGHGPDAARFGPQA---ARWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSR------ 118 (226)
T ss_dssp TTCEEEEESCTTSHHHHHHGGGS---SEEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEE------
T ss_pred CCCeEEEeCCCCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeC------
Confidence 35689999999999999998887 378899999999999999966544 233321111112 3478999875
Q ss_pred CcccccCCCCCCCCchHHHHhhhcCCcEEEEEe---CCCc--cchhhccCc
Q 023723 89 NDDMTVITKHDQPDDSWDKLLESCDPVERFLEF---SNSG--DQVNTETGF 134 (278)
Q Consensus 89 S~ag~~~g~~d~r~~l~~~~i~~~~P~~~i~Ev---~~~~--~~~l~~~GY 134 (278)
.....++.++.+.++|.-.++++ .+.. .+.|++.|+
T Consensus 119 ----------~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~Gf 159 (226)
T 3m33_A 119 ----------RGPTSVILRLPELAAPDAHFLYVGPRLNVPEVPERLAAVGW 159 (226)
T ss_dssp ----------SCCSGGGGGHHHHEEEEEEEEEEESSSCCTHHHHHHHHTTC
T ss_pred ----------CCHHHHHHHHHHHcCCCcEEEEeCCcCCHHHHHHHHHHCCC
Confidence 12335666778889998777772 2222 556666676
No 57
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=96.51 E-value=0.0039 Score=55.34 Aligned_cols=70 Identities=14% Similarity=0.037 Sum_probs=50.9
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCC-----CC-ccccccccccccccCCCEEEeCCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-----RP-YQAKRKPLSFRCQLLNNQLLRSPS 84 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~-----~~-~~~~~~~~~~~~~~~~Dll~~g~P 84 (278)
..-+|||+.||.|.++..+...+ ..|.++|+++.+++..+.|... .. +..+.... +.+.+|++++.+|
T Consensus 42 ~~~~VLDiG~G~G~lt~~La~~~---~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~---~~~~~D~Vv~n~p 115 (299)
T 2h1r_A 42 SSDIVLEIGCGTGNLTVKLLPLA---KKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKT---VFPKFDVCTANIP 115 (299)
T ss_dssp TTCEEEEECCTTSTTHHHHTTTS---SEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSS---CCCCCSEEEEECC
T ss_pred CcCEEEEEcCcCcHHHHHHHhcC---CEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhC---CcccCCEEEEcCC
Confidence 34589999999999999998876 4789999999999998888621 11 12222222 2347899999999
Q ss_pred CC
Q 023723 85 PL 86 (278)
Q Consensus 85 Cq 86 (278)
++
T Consensus 116 y~ 117 (299)
T 2h1r_A 116 YK 117 (299)
T ss_dssp GG
T ss_pred cc
Confidence 65
No 58
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=96.45 E-value=0.0022 Score=59.72 Aligned_cols=72 Identities=14% Similarity=0.093 Sum_probs=52.5
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCC-----C---cccccccc-ccccccCCCEEEeC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHR-----P---YQAKRKPL-SFRCQLLNNQLLRS 82 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~-----~---~~~~~~~~-~~~~~~~~Dll~~g 82 (278)
.-+|+|||||.|+.++.|...| ..|.++|+++.+++.-++|.... . +..|.... .......+|+|+.-
T Consensus 94 g~~VLDLgcG~G~~al~LA~~g---~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~lD 170 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSKA---SQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYVD 170 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTTC---SEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEEC
T ss_pred CCEEEEeCCCchHHHHHHHhcC---CEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEEC
Confidence 4689999999999999998877 47899999999999999997522 1 12222211 11112479999999
Q ss_pred CCCC
Q 023723 83 PSPL 86 (278)
Q Consensus 83 ~PCq 86 (278)
||=.
T Consensus 171 PPrr 174 (410)
T 3ll7_A 171 PARR 174 (410)
T ss_dssp CEEC
T ss_pred CCCc
Confidence 9944
No 59
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=96.43 E-value=0.004 Score=56.34 Aligned_cols=74 Identities=18% Similarity=0.142 Sum_probs=50.3
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCc------cccccccccccccCCCEEEeCCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY------QAKRKPLSFRCQLLNNQLLRSPS 84 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~------~~~~~~~~~~~~~~~Dll~~g~P 84 (278)
..-+++|+|||.|.+..-+...+-+...+.++|+++.+++.-+.|.....+ ..+...+.. ....+|+++.-||
T Consensus 203 ~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~-~~~~~D~Ii~npP 281 (354)
T 3tma_A 203 PGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPR-FFPEVDRILANPP 281 (354)
T ss_dssp TTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGG-TCCCCSEEEECCC
T ss_pred CCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCcc-ccCCCCEEEECCC
Confidence 346899999999999876655320124678999999999999999753322 222221111 1235799999999
Q ss_pred C
Q 023723 85 P 85 (278)
Q Consensus 85 C 85 (278)
+
T Consensus 282 y 282 (354)
T 3tma_A 282 H 282 (354)
T ss_dssp S
T ss_pred C
Confidence 8
No 60
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=96.43 E-value=0.003 Score=51.63 Aligned_cols=103 Identities=15% Similarity=0.028 Sum_probs=61.4
Q ss_pred CCeEEeeecchhhHHHHHHhc-CCCceEEEEEcCCHHHHHHHHHHcCCCCc-------cccccccccccccCCCEEEeCC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFGHRPY-------QAKRKPLSFRCQLLNNQLLRSP 83 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~a-G~~~~~v~a~e~~~~a~~~y~~N~~~~~~-------~~~~~~~~~~~~~~~Dll~~g~ 83 (278)
..+|||+.||.|.+...+.+. +- -..|.++|+++.+++.-+.|...... ..+...+.......+|+++..+
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~ 101 (197)
T 3eey_A 23 GDTVVDATCGNGNDTAFLASLVGE-NGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFNL 101 (197)
T ss_dssp TCEEEESCCTTSHHHHHHHHHHCT-TCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEEE
T ss_pred CCEEEEcCCCCCHHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEEcC
Confidence 469999999999999887665 21 13789999999999998888643221 2222222211225799999887
Q ss_pred CCCCCCcccccCCCCCCCCchHHHHhhhcCCcE
Q 023723 84 SPLLGNDDMTVITKHDQPDDSWDKLLESCDPVE 116 (278)
Q Consensus 84 PCq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~~ 116 (278)
|--+.+........ +....++.++.+.++|.-
T Consensus 102 ~~~~~~~~~~~~~~-~~~~~~l~~~~~~Lk~gG 133 (197)
T 3eey_A 102 GYLPSGDHSISTRP-ETTIQALSKAMELLVTGG 133 (197)
T ss_dssp SBCTTSCTTCBCCH-HHHHHHHHHHHHHEEEEE
T ss_pred CcccCcccccccCc-ccHHHHHHHHHHhCcCCC
Confidence 65222111100000 011124555667789953
No 61
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=96.40 E-value=0.0023 Score=59.67 Aligned_cols=81 Identities=14% Similarity=0.044 Sum_probs=56.3
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCC-----cccccccccc-ccccCCCEEEeCCCC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP-----YQAKRKPLSF-RCQLLNNQLLRSPSP 85 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~-----~~~~~~~~~~-~~~~~~Dll~~g~PC 85 (278)
.-+|||++||.||.+..+...+-. -.|.++|+++.+++..+.|..... ...+...... .....+|+++.-+||
T Consensus 247 g~~VLDlgaG~G~~t~~la~~~~~-~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~D~Pc 325 (429)
T 1sqg_A 247 GEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPC 325 (429)
T ss_dssp TCEEEEESCTTCHHHHHHHHHCTT-CEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEEECCC
T ss_pred cCeEEEECCCchHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcccCCCCEEEEeCCC
Confidence 458999999999999888776521 478999999999998888864221 1122111111 122469999999999
Q ss_pred CCCCcccc
Q 023723 86 LLGNDDMT 93 (278)
Q Consensus 86 q~fS~ag~ 93 (278)
.+.....+
T Consensus 326 sg~g~~~~ 333 (429)
T 1sqg_A 326 SATGVIRR 333 (429)
T ss_dssp CCGGGTTT
T ss_pred CcccccCC
Confidence 88655443
No 62
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=96.38 E-value=0.0066 Score=51.84 Aligned_cols=76 Identities=11% Similarity=0.092 Sum_probs=50.1
Q ss_pred CCCeEEeeecchhhHHHHHHhc--CCCceEEEEEcCCHHHHHHHHHHcCCCCc-------cccccc--ccccc---ccCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKA--DVSAQVVEAFDINDKANDVYELNFGHRPY-------QAKRKP--LSFRC---QLLN 76 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~a--G~~~~~v~a~e~~~~a~~~y~~N~~~~~~-------~~~~~~--~~~~~---~~~~ 76 (278)
...+|||++||.|.+...+... + ..|.++|+++.+++.-+.|...... ..+... .+... ...+
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~f 141 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNG---WYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIY 141 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHC---CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCB
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCC---CeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcc
Confidence 3568999999999988776554 3 3789999999999998888642211 122111 11111 1369
Q ss_pred CEEEeCCCCCCCC
Q 023723 77 NQLLRSPSPLLGN 89 (278)
Q Consensus 77 Dll~~g~PCq~fS 89 (278)
|+++..||+-...
T Consensus 142 D~i~~npp~~~~~ 154 (254)
T 2h00_A 142 DFCMCNPPFFANQ 154 (254)
T ss_dssp SEEEECCCCC---
T ss_pred cEEEECCCCccCc
Confidence 9999999986544
No 63
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=96.37 E-value=0.0064 Score=53.49 Aligned_cols=71 Identities=14% Similarity=0.090 Sum_probs=53.7
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCc-------cccccccccccccCCCEEEeCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-------QAKRKPLSFRCQLLNNQLLRSP 83 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~-------~~~~~~~~~~~~~~~Dll~~g~ 83 (278)
..-+|||+.||.|.++..+...| ..|.++|+++..++..+.|+..... ..|... .+.+.+|++++.+
T Consensus 28 ~~~~VLDiG~G~G~lt~~L~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~---~~~~~fD~vv~nl 101 (285)
T 1zq9_A 28 PTDVVLEVGPGTGNMTVKLLEKA---KKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLK---TDLPFFDTCVANL 101 (285)
T ss_dssp TTCEEEEECCTTSTTHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTT---SCCCCCSEEEEEC
T ss_pred CCCEEEEEcCcccHHHHHHHhhC---CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceec---ccchhhcEEEEec
Confidence 34689999999999999998887 3789999999999999998754321 222221 1234789999999
Q ss_pred CCCC
Q 023723 84 SPLL 87 (278)
Q Consensus 84 PCq~ 87 (278)
|++-
T Consensus 102 py~~ 105 (285)
T 1zq9_A 102 PYQI 105 (285)
T ss_dssp CGGG
T ss_pred Cccc
Confidence 9764
No 64
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=96.33 E-value=0.011 Score=47.61 Aligned_cols=113 Identities=12% Similarity=0.056 Sum_probs=73.0
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCC-ccccccccccccccCCCEEEeCCCCCCCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP-YQAKRKPLSFRCQLLNNQLLRSPSPLLGN 89 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~-~~~~~~~~~~~~~~~~Dll~~g~PCq~fS 89 (278)
...+|||+.||.|.+...+...| ..+.++|+++.+++..+.|+++.. ...+..... .....+|+++..+++-.+.
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~~-~~~~~~D~i~~~~~~~~~~ 121 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQG---HDVLGTDLDPILIDYAKQDFPEARWVVGDLSVDQ-ISETDFDLIVSAGNVMGFL 121 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTT---CEEEEEESCHHHHHHHHHHCTTSEEEECCTTTSC-CCCCCEEEEEECCCCGGGS
T ss_pred CCCeEEEECCCCCHHHHHHHHCC---CcEEEEcCCHHHHHHHHHhCCCCcEEEcccccCC-CCCCceeEEEECCcHHhhc
Confidence 45699999999999999998887 368899999999999999987643 223322221 1234689999876654432
Q ss_pred cccccCCCCCCCCchHHHHhhhcCCc-EEEEEeCCC---c----cchhhccCc
Q 023723 90 DDMTVITKHDQPDDSWDKLLESCDPV-ERFLEFSNS---G----DQVNTETGF 134 (278)
Q Consensus 90 ~ag~~~g~~d~r~~l~~~~i~~~~P~-~~i~Ev~~~---~----~~~l~~~GY 134 (278)
. .+....++.++.+.++|. .+++.+... . .+.|++.|+
T Consensus 122 ~-------~~~~~~~l~~~~~~l~~~G~l~~~~~~~~~~~~~~~~~~l~~~Gf 167 (195)
T 3cgg_A 122 A-------EDGREPALANIHRALGADGRAVIGFGAGRGWVFGDFLEVAERVGL 167 (195)
T ss_dssp C-------HHHHHHHHHHHHHHEEEEEEEEEEEETTSSCCHHHHHHHHHHHTE
T ss_pred C-------hHHHHHHHHHHHHHhCCCCEEEEEeCCCCCcCHHHHHHHHHHcCC
Confidence 1 011234555566778885 445552211 1 455566666
No 65
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=96.33 E-value=0.0062 Score=50.12 Aligned_cols=106 Identities=16% Similarity=0.054 Sum_probs=67.6
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCc------cccccccccccccCCCEEEeCCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY------QAKRKPLSFRCQLLNNQLLRSPS 84 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~------~~~~~~~~~~~~~~~Dll~~g~P 84 (278)
...+|||+.||.|.+...+.+.| ...|.++|+++.+++.-+.|...... ..+... .....+|+++..+|
T Consensus 60 ~~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~---~~~~~fD~i~~~~~ 134 (205)
T 3grz_A 60 KPLTVADVGTGSGILAIAAHKLG--AKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLA---DVDGKFDLIVANIL 134 (205)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTT---TCCSCEEEEEEESC
T ss_pred CCCEEEEECCCCCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccc---cCCCCceEEEECCc
Confidence 35699999999999999988887 46889999999999988888643221 122111 12357999998876
Q ss_pred CCCCCcccccCCCCCCCCchHHHHhhhcCCc-EEEE-Ee-CCCc---cchhhccCc
Q 023723 85 PLLGNDDMTVITKHDQPDDSWDKLLESCDPV-ERFL-EF-SNSG---DQVNTETGF 134 (278)
Q Consensus 85 Cq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~-~~i~-Ev-~~~~---~~~l~~~GY 134 (278)
.+.. ..++.++.+.++|. .+++ ++ .... .+.+++.||
T Consensus 135 ~~~~-------------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~Gf 177 (205)
T 3grz_A 135 AEIL-------------LDLIPQLDSHLNEDGQVIFSGIDYLQLPKIEQALAENSF 177 (205)
T ss_dssp HHHH-------------HHHGGGSGGGEEEEEEEEEEEEEGGGHHHHHHHHHHTTE
T ss_pred HHHH-------------HHHHHHHHHhcCCCCEEEEEecCcccHHHHHHHHHHcCC
Confidence 4210 12344455567884 3333 32 2211 555566666
No 66
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=96.30 E-value=0.0049 Score=57.83 Aligned_cols=82 Identities=10% Similarity=0.005 Sum_probs=55.1
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCC------cccccccccc-ccccCCCEEEeCCC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP------YQAKRKPLSF-RCQLLNNQLLRSPS 84 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~------~~~~~~~~~~-~~~~~~Dll~~g~P 84 (278)
.-+|||++||.||.+..+...--..-.|.++|+++.+++..+.|..... ...+...... .....+|+++.-+|
T Consensus 260 g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl~D~P 339 (450)
T 2yxl_A 260 GETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEVADKVLLDAP 339 (450)
T ss_dssp TCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSCEEEEEEECC
T ss_pred cCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhccCCCCEEEEcCC
Confidence 4589999999999998876631011378999999999999998853211 1222111111 11146899999999
Q ss_pred CCCCCcccc
Q 023723 85 PLLGNDDMT 93 (278)
Q Consensus 85 Cq~fS~ag~ 93 (278)
|.+.....+
T Consensus 340 csg~g~~~~ 348 (450)
T 2yxl_A 340 CTSSGTIGK 348 (450)
T ss_dssp CCCGGGTTT
T ss_pred CCCCeeecc
Confidence 987765543
No 67
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=96.27 E-value=0.0074 Score=52.16 Aligned_cols=70 Identities=10% Similarity=0.139 Sum_probs=49.3
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCC---ccccccccccccccCCCEEEeCCC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP---YQAKRKPLSFRCQLLNNQLLRSPS 84 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~---~~~~~~~~~~~~~~~~Dll~~g~P 84 (278)
.-+|+|+.||.|.++..+...| ...|.++|+|+.+++..+.| +... +..|...++..+..+..++++.+|
T Consensus 32 ~~~VLDiG~G~G~lt~~L~~~~--~~~v~avEid~~~~~~~~~~-~~~~v~~i~~D~~~~~~~~~~~~~~vv~NlP 104 (249)
T 3ftd_A 32 GNTVVEVGGGTGNLTKVLLQHP--LKKLYVIELDREMVENLKSI-GDERLEVINEDASKFPFCSLGKELKVVGNLP 104 (249)
T ss_dssp TCEEEEEESCHHHHHHHHTTSC--CSEEEEECCCHHHHHHHTTS-CCTTEEEECSCTTTCCGGGSCSSEEEEEECC
T ss_pred cCEEEEEcCchHHHHHHHHHcC--CCeEEEEECCHHHHHHHHhc-cCCCeEEEEcchhhCChhHccCCcEEEEECc
Confidence 4589999999999999998886 36889999999999999888 4322 233333332222222346777777
No 68
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=96.26 E-value=0.017 Score=47.48 Aligned_cols=109 Identities=8% Similarity=-0.035 Sum_probs=69.3
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCC------ccccccccccccccCCCEEEeCCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP------YQAKRKPLSFRCQLLNNQLLRSPS 84 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~------~~~~~~~~~~~~~~~~Dll~~g~P 84 (278)
..-+|||+.||.|.++..+...+- ...|.++|+++.+++.-+.|..... +..+.... ......+|+++...+
T Consensus 40 ~~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~-~~~~~~~D~i~~~~~ 117 (204)
T 3e05_A 40 DDLVMWDIGAGSASVSIEASNLMP-NGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEG-LDDLPDPDRVFIGGS 117 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHCT-TSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTT-CTTSCCCSEEEESCC
T ss_pred CCCEEEEECCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhh-hhcCCCCCEEEECCC
Confidence 346899999999999998888762 3578999999999999888863211 11221111 112256999998765
Q ss_pred CCCCCcccccCCCCCCCCchHHHHhhhcCCc-EEEEE-eC--CCc--cchhhccCc
Q 023723 85 PLLGNDDMTVITKHDQPDDSWDKLLESCDPV-ERFLE-FS--NSG--DQVNTETGF 134 (278)
Q Consensus 85 Cq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~-~~i~E-v~--~~~--~~~l~~~GY 134 (278)
.. ....++.++.+.++|. .+++. .. +.. .+.|++.||
T Consensus 118 ~~-------------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~~~g~ 160 (204)
T 3e05_A 118 GG-------------MLEEIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEFLEDHGY 160 (204)
T ss_dssp TT-------------CHHHHHHHHHHHCCTTCEEEEEECBHHHHHHHHHHHHHTTC
T ss_pred Cc-------------CHHHHHHHHHHhcCCCeEEEEEecccccHHHHHHHHHHCCC
Confidence 42 1124566677778984 44444 21 111 555666665
No 69
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=96.20 E-value=0.043 Score=43.49 Aligned_cols=93 Identities=5% Similarity=-0.032 Sum_probs=61.3
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCcc------ccccccccccc--cCCCEEEeC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQ------AKRKPLSFRCQ--LLNNQLLRS 82 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~~------~~~~~~~~~~~--~~~Dll~~g 82 (278)
...+|+|+.||.|.+...+.... +...|.++|+++.+++.-+.|....... .+.. +.... ..+|+++.+
T Consensus 25 ~~~~vldiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~--~~~~~~~~~~D~i~~~ 101 (178)
T 3hm2_A 25 PHETLWDIGGGSGSIAIEWLRST-PQTTAVCFEISEERRERILSNAINLGVSDRIAVQQGAP--RAFDDVPDNPDVIFIG 101 (178)
T ss_dssp TTEEEEEESTTTTHHHHHHHTTS-SSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTT--GGGGGCCSCCSEEEEC
T ss_pred CCCeEEEeCCCCCHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchH--hhhhccCCCCCEEEEC
Confidence 34699999999999999887762 1357889999999999988886433221 1111 11122 579999976
Q ss_pred CCCCCCCcccccCCCCCCCCchHHHHhhhcCCc-EEEEE
Q 023723 83 PSPLLGNDDMTVITKHDQPDDSWDKLLESCDPV-ERFLE 120 (278)
Q Consensus 83 ~PCq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~-~~i~E 120 (278)
.+... ..++.++.+.++|. .+++.
T Consensus 102 ~~~~~--------------~~~l~~~~~~L~~gG~l~~~ 126 (178)
T 3hm2_A 102 GGLTA--------------PGVFAAAWKRLPVGGRLVAN 126 (178)
T ss_dssp C-TTC--------------TTHHHHHHHTCCTTCEEEEE
T ss_pred CcccH--------------HHHHHHHHHhcCCCCEEEEE
Confidence 55321 34666677788884 44444
No 70
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=96.16 E-value=0.014 Score=49.94 Aligned_cols=45 Identities=24% Similarity=0.272 Sum_probs=39.6
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH 58 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~ 58 (278)
..-+|||+.||.|.++..+...| ..|.++|+|+.+++..+.|+..
T Consensus 30 ~~~~VLDiG~G~G~lt~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~ 74 (244)
T 1qam_A 30 EHDNIFEIGSGKGHFTLELVQRC---NFVTAIEIDHKLCKTTENKLVD 74 (244)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHS---SEEEEECSCHHHHHHHHHHTTT
T ss_pred CCCEEEEEeCCchHHHHHHHHcC---CeEEEEECCHHHHHHHHHhhcc
Confidence 34689999999999999998887 4789999999999999999853
No 71
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=96.14 E-value=0.018 Score=50.18 Aligned_cols=95 Identities=8% Similarity=-0.051 Sum_probs=64.2
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCcccccccccc----ccccCCCEEEeCCCCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQAKRKPLSF----RCQLLNNQLLRSPSPL 86 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~~~~~~~~~~----~~~~~~Dll~~g~PCq 86 (278)
...+|||+.||.|.++..|.+.| ..|.++|+++.+++.-+.|.....+..+...... .....+|++++....+
T Consensus 45 ~g~~VLDlGcGtG~~a~~La~~g---~~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~~~~~~~~~fD~Vv~~~~l~ 121 (261)
T 3iv6_A 45 PGSTVAVIGASTRFLIEKALERG---ASVTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIPKELAGHFDFVLNDRLIN 121 (261)
T ss_dssp TTCEEEEECTTCHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCCGGGTTCCSEEEEESCGG
T ss_pred CcCEEEEEeCcchHHHHHHHhcC---CEEEEEECCHHHHHHHHHHHHhccceeeeeecccccccccCCCccEEEEhhhhH
Confidence 34699999999999999998888 3689999999999999999876532222111111 1134799999876544
Q ss_pred CCCcccccCCCCCCCCchHHHHhhhcCCcEE
Q 023723 87 LGNDDMTVITKHDQPDDSWDKLLESCDPVER 117 (278)
Q Consensus 87 ~fS~ag~~~g~~d~r~~l~~~~i~~~~P~~~ 117 (278)
.|+.. .....+.++.+.+ |.-.
T Consensus 122 ~~~~~--------~~~~~l~~l~~lL-PGG~ 143 (261)
T 3iv6_A 122 RFTTE--------EARRACLGMLSLV-GSGT 143 (261)
T ss_dssp GSCHH--------HHHHHHHHHHHHH-TTSE
T ss_pred hCCHH--------HHHHHHHHHHHhC-cCcE
Confidence 43321 1223566677778 8533
No 72
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=96.12 E-value=0.0074 Score=55.14 Aligned_cols=75 Identities=11% Similarity=0.026 Sum_probs=52.5
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCC---c--ccc--c-----cccccccccCCCEE
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP---Y--QAK--R-----KPLSFRCQLLNNQL 79 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~---~--~~~--~-----~~~~~~~~~~~Dll 79 (278)
.-+|||+|||.||=++.+-..+- -..|+|+|+++...+..+.|..... + ... . ..........+|.|
T Consensus 149 g~~VLD~CAaPGGKT~~la~~~~-~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~fD~V 227 (359)
T 4fzv_A 149 GDIVLDLCAAPGGKTLALLQTGC-CRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYDRV 227 (359)
T ss_dssp TEEEEESSCTTCHHHHHHHHTTC-EEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCEEEE
T ss_pred CCEEEEecCCccHHHHHHHHhcC-CCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccCCEE
Confidence 45899999999999888777663 3468999999999999988863211 1 111 1 11111223479999
Q ss_pred EeCCCCCC
Q 023723 80 LRSPSPLL 87 (278)
Q Consensus 80 ~~g~PCq~ 87 (278)
+.-+||.+
T Consensus 228 LlDaPCSg 235 (359)
T 4fzv_A 228 LVDVPCTT 235 (359)
T ss_dssp EEECCCCC
T ss_pred EECCccCC
Confidence 99999975
No 73
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=96.11 E-value=0.013 Score=47.87 Aligned_cols=97 Identities=13% Similarity=0.023 Sum_probs=65.7
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCC-ccccccccccccccCCCEEEeCCCCCCCCc
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP-YQAKRKPLSFRCQLLNNQLLRSPSPLLGND 90 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~-~~~~~~~~~~~~~~~~Dll~~g~PCq~fS~ 90 (278)
..+|||+.||.|.+...+...|. .|.++|+++.+++.-+.++++.. ...+..... .....+|+++....-..++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~l~~~~- 116 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGH---QIEGLEPATRLVELARQTHPSVTFHHGTITDLS-DSPKRWAGLLAWYSLIHMG- 116 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTC---CEEEECCCHHHHHHHHHHCTTSEEECCCGGGGG-GSCCCEEEEEEESSSTTCC-
T ss_pred CCeEEEecCCCCHHHHHHHhcCC---eEEEEeCCHHHHHHHHHhCCCCeEEeCcccccc-cCCCCeEEEEehhhHhcCC-
Confidence 56899999999999999988883 67899999999999999987654 233322222 2235789999864322111
Q ss_pred ccccCCCCCCCCchHHHHhhhcCCc-EEEEE
Q 023723 91 DMTVITKHDQPDDSWDKLLESCDPV-ERFLE 120 (278)
Q Consensus 91 ag~~~g~~d~r~~l~~~~i~~~~P~-~~i~E 120 (278)
.+....++.++.+.++|. .+++.
T Consensus 117 -------~~~~~~~l~~~~~~L~pgG~l~i~ 140 (203)
T 3h2b_A 117 -------PGELPDALVALRMAVEDGGGLLMS 140 (203)
T ss_dssp -------TTTHHHHHHHHHHTEEEEEEEEEE
T ss_pred -------HHHHHHHHHHHHHHcCCCcEEEEE
Confidence 122334566677778884 34444
No 74
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=96.10 E-value=0.0084 Score=54.74 Aligned_cols=96 Identities=8% Similarity=0.064 Sum_probs=64.7
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCC---C---ccccccc-cccccccCCCEEEeCCC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHR---P---YQAKRKP-LSFRCQLLNNQLLRSPS 84 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~---~---~~~~~~~-~~~~~~~~~Dll~~g~P 84 (278)
.-+|||++ |.|.++..+...|. ...|.++|+++.+++.-+.|.... . +..|... +.......+|+++..||
T Consensus 173 ~~~VLDlG-G~G~~~~~la~~~~-~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~p 250 (373)
T 2qm3_A 173 NKDIFVLG-DDDLTSIALMLSGL-PKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDPP 250 (373)
T ss_dssp TCEEEEES-CTTCHHHHHHHHTC-CSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECCC
T ss_pred CCEEEEEC-CCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECCC
Confidence 46899999 99999999988773 257899999999999988886421 1 2233222 21111236999999999
Q ss_pred CCCCCcccccCCCCCCCCchHHHHhhhcCC-c-EEEEE
Q 023723 85 PLLGNDDMTVITKHDQPDDSWDKLLESCDP-V-ERFLE 120 (278)
Q Consensus 85 Cq~fS~ag~~~g~~d~r~~l~~~~i~~~~P-~-~~i~E 120 (278)
|... + + ..++.++.+.++| - +++++
T Consensus 251 ~~~~---~------~--~~~l~~~~~~LkpgG~~~~~~ 277 (373)
T 2qm3_A 251 ETLE---A------I--RAFVGRGIATLKGPRCAGYFG 277 (373)
T ss_dssp SSHH---H------H--HHHHHHHHHTBCSTTCEEEEE
T ss_pred CchH---H------H--HHHHHHHHHHcccCCeEEEEE
Confidence 8542 1 1 2344456667888 3 56888
No 75
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=96.08 E-value=0.0078 Score=55.35 Aligned_cols=96 Identities=11% Similarity=0.102 Sum_probs=63.1
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCC-----ccccccccccccccCCCEEEeCCCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP-----YQAKRKPLSFRCQLLNNQLLRSPSP 85 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~-----~~~~~~~~~~~~~~~~Dll~~g~PC 85 (278)
..-+|||++||.|.++..+...| . .|.++|+++.+++.-+.|..... +..+..... .....+|+|+..||.
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~g--~-~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~-~~~~~fD~Ii~npp~ 308 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARMG--A-EVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEAL-TEEARFDIIVTNPPF 308 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHTT--C-EEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTS-CTTCCEEEEEECCCC
T ss_pred CCCEEEEEeeeCCHHHHHHHHcC--C-EEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhcc-ccCCCeEEEEECCch
Confidence 45699999999999999998888 3 78899999999999998875322 122211111 112579999999997
Q ss_pred CCCCcccccCCCCCCCCchHHHHhhhcCCc
Q 023723 86 LLGNDDMTVITKHDQPDDSWDKLLESCDPV 115 (278)
Q Consensus 86 q~fS~ag~~~g~~d~r~~l~~~~i~~~~P~ 115 (278)
... ... ..+....++.++.+.++|.
T Consensus 309 ~~~----~~~-~~~~~~~~l~~~~~~LkpG 333 (381)
T 3dmg_A 309 HVG----GAV-ILDVAQAFVNVAAARLRPG 333 (381)
T ss_dssp CTT----CSS-CCHHHHHHHHHHHHHEEEE
T ss_pred hhc----ccc-cHHHHHHHHHHHHHhcCcC
Confidence 431 111 0111123445566678885
No 76
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=96.05 E-value=0.041 Score=45.57 Aligned_cols=120 Identities=13% Similarity=-0.042 Sum_probs=70.2
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCC-----CC-ccccccccc-cccccCCCEEEeCCC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-----RP-YQAKRKPLS-FRCQLLNNQLLRSPS 84 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~-----~~-~~~~~~~~~-~~~~~~~Dll~~g~P 84 (278)
.-+|||+.||.|.+...+....- -..+.++|+++.+++.-+.|... .. +..+...+. ......+|+++..+|
T Consensus 42 ~~~vLDiGcG~G~~~~~la~~~p-~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~~ 120 (214)
T 1yzh_A 42 NPIHVEVGSGKGAFVSGMAKQNP-DINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNFS 120 (214)
T ss_dssp CCEEEEESCTTSHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEESC
T ss_pred CCeEEEEccCcCHHHHHHHHHCC-CCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEECC
Confidence 46899999999999988877632 24789999999999988887521 11 222222221 122346999999887
Q ss_pred CCCCCcccccCCCCCCCCchHHHHhhhcCCc-EEEEEeCCCc-----cchhhccCc
Q 023723 85 PLLGNDDMTVITKHDQPDDSWDKLLESCDPV-ERFLEFSNSG-----DQVNTETGF 134 (278)
Q Consensus 85 Cq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~-~~i~Ev~~~~-----~~~l~~~GY 134 (278)
..... ....+.. -....++.++.+.++|. .++++..... ++.|++.||
T Consensus 121 ~~~~~-~~~~~~~-~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~ 174 (214)
T 1yzh_A 121 DPWPK-KRHEKRR-LTYKTFLDTFKRILPENGEIHFKTDNRGLFEYSLVSFSQYGM 174 (214)
T ss_dssp CCCCS-GGGGGGS-TTSHHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHHTC
T ss_pred CCccc-cchhhhc-cCCHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHCCC
Confidence 43222 1110000 01123444566668885 5666621111 455666676
No 77
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=96.03 E-value=0.03 Score=46.24 Aligned_cols=91 Identities=12% Similarity=0.057 Sum_probs=62.6
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcC-CCC-ccccccccccccccCCCEEEeCCCCCCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG-HRP-YQAKRKPLSFRCQLLNNQLLRSPSPLLG 88 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~-~~~-~~~~~~~~~~~~~~~~Dll~~g~PCq~f 88 (278)
...+|||+-||.|.+...+...| ..+.++|+++.+++..+.+++ ... ...+...... . ..+|+++.......
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~~-~-~~fD~v~~~~~l~~- 118 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLAG---RTVYGIEPSREMRMIAKEKLPKEFSITEGDFLSFEV-P-TSIDTIVSTYAFHH- 118 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHTT---CEEEEECSCHHHHHHHHHHSCTTCCEESCCSSSCCC-C-SCCSEEEEESCGGG-
T ss_pred CCCeEEEeCCCCCHHHHHHHhCC---CeEEEEeCCHHHHHHHHHhCCCceEEEeCChhhcCC-C-CCeEEEEECcchhc-
Confidence 45699999999999999998887 368899999999999999988 222 2333222221 1 67999998643222
Q ss_pred CcccccCCCCCC-CCchHHHHhhhcCCc
Q 023723 89 NDDMTVITKHDQ-PDDSWDKLLESCDPV 115 (278)
Q Consensus 89 S~ag~~~g~~d~-r~~l~~~~i~~~~P~ 115 (278)
..++ +..++.++.+.++|.
T Consensus 119 --------~~~~~~~~~l~~~~~~Lkpg 138 (220)
T 3hnr_A 119 --------LTDDEKNVAIAKYSQLLNKG 138 (220)
T ss_dssp --------SCHHHHHHHHHHHHHHSCTT
T ss_pred --------CChHHHHHHHHHHHHhcCCC
Confidence 1111 122566677789994
No 78
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=95.99 E-value=0.0082 Score=53.35 Aligned_cols=70 Identities=16% Similarity=0.047 Sum_probs=51.0
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcC---CCC-ccccccccccccccCCCEEEeCCCC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG---HRP-YQAKRKPLSFRCQLLNNQLLRSPSP 85 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~---~~~-~~~~~~~~~~~~~~~~Dll~~g~PC 85 (278)
.-+|||+-||.|.++..+...+ ..|.++|+|+..++..+.|+. +.. +..|...++.. ...+|++++.+|-
T Consensus 51 ~~~VLEIG~G~G~lT~~La~~~---~~V~aVEid~~li~~a~~~~~~~~~v~vi~gD~l~~~~~-~~~fD~Iv~NlPy 124 (295)
T 3gru_A 51 DDVVLEIGLGKGILTEELAKNA---KKVYVIEIDKSLEPYANKLKELYNNIEIIWGDALKVDLN-KLDFNKVVANLPY 124 (295)
T ss_dssp TCEEEEECCTTSHHHHHHHHHS---SEEEEEESCGGGHHHHHHHHHHCSSEEEEESCTTTSCGG-GSCCSEEEEECCG
T ss_pred cCEEEEECCCchHHHHHHHhcC---CEEEEEECCHHHHHHHHHHhccCCCeEEEECchhhCCcc-cCCccEEEEeCcc
Confidence 4589999999999999998876 478899999999998888873 222 23333322221 1348999988873
No 79
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=95.96 E-value=0.0084 Score=52.06 Aligned_cols=44 Identities=11% Similarity=0.189 Sum_probs=39.5
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH 58 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~ 58 (278)
.-+|||+.||.|.++..+...| ..|.++|+|+..++..+.|+..
T Consensus 30 ~~~VLEIG~G~G~lt~~La~~~---~~V~avEid~~~~~~~~~~~~~ 73 (255)
T 3tqs_A 30 TDTLVEIGPGRGALTDYLLTEC---DNLALVEIDRDLVAFLQKKYNQ 73 (255)
T ss_dssp TCEEEEECCTTTTTHHHHTTTS---SEEEEEECCHHHHHHHHHHHTT
T ss_pred cCEEEEEcccccHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHhh
Confidence 4689999999999999998887 4789999999999999999864
No 80
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=95.93 E-value=0.025 Score=46.90 Aligned_cols=104 Identities=12% Similarity=0.045 Sum_probs=66.7
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCC-------ccccccccccccccCCCEEEeCCC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP-------YQAKRKPLSFRCQLLNNQLLRSPS 84 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~-------~~~~~~~~~~~~~~~~Dll~~g~P 84 (278)
.-+|||+.||.|.++..+.+.+ ..|.++|+++.+++.-+.|..... +..+.... ....+.+|+++.+..
T Consensus 56 ~~~vLDlGcG~G~~~~~la~~~---~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~-~~~~~~~D~v~~~~~ 131 (204)
T 3njr_A 56 GELLWDIGGGSGSVSVEWCLAG---GRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAA-LADLPLPEAVFIGGG 131 (204)
T ss_dssp TCEEEEETCTTCHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGG-GTTSCCCSEEEECSC
T ss_pred CCEEEEecCCCCHHHHHHHHcC---CEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhh-cccCCCCCEEEECCc
Confidence 4689999999999998887776 468999999999999888852211 12222110 112346899986541
Q ss_pred CCCCCcccccCCCCCCCCchHHHHhhhcCCc-EEEEEeCCCc-----cchhhccCc
Q 023723 85 PLLGNDDMTVITKHDQPDDSWDKLLESCDPV-ERFLEFSNSG-----DQVNTETGF 134 (278)
Q Consensus 85 Cq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~-~~i~Ev~~~~-----~~~l~~~GY 134 (278)
. + .. ++.++.+.++|. .+++...... .+.|++.||
T Consensus 132 ------------~-~-~~-~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~g~ 172 (204)
T 3njr_A 132 ------------G-S-QA-LYDRLWEWLAPGTRIVANAVTLESETLLTQLHARHGG 172 (204)
T ss_dssp ------------C-C-HH-HHHHHHHHSCTTCEEEEEECSHHHHHHHHHHHHHHCS
T ss_pred ------------c-c-HH-HHHHHHHhcCCCcEEEEEecCcccHHHHHHHHHhCCC
Confidence 1 1 12 566677788994 5566622111 556666676
No 81
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=95.91 E-value=0.012 Score=51.18 Aligned_cols=40 Identities=15% Similarity=0.204 Sum_probs=32.9
Q ss_pred CeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHH
Q 023723 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELN 55 (278)
Q Consensus 13 ~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N 55 (278)
-+|||+|||.|..++-+-..| . .|.++|+++..+...+.|
T Consensus 90 ~~VLDl~~G~G~dal~lA~~g--~-~V~~vE~~~~~~~l~~~~ 129 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASVG--C-RVRMLERNPVVAALLDDG 129 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHHT--C-CEEEEECCHHHHHHHHHH
T ss_pred CEEEEcCCcCCHHHHHHHHcC--C-EEEEEECCHHHHHHHHHH
Confidence 689999999999999888778 3 489999999765555554
No 82
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=95.89 E-value=0.021 Score=49.43 Aligned_cols=105 Identities=15% Similarity=0.012 Sum_probs=68.0
Q ss_pred CCeEEeeecchhhHHHHHHhc-CCCceEEEEEcCCHHHHHHHHHHcCCCCc-------cccccccccccccCCCEEEeCC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFGHRPY-------QAKRKPLSFRCQLLNNQLLRSP 83 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~a-G~~~~~v~a~e~~~~a~~~y~~N~~~~~~-------~~~~~~~~~~~~~~~Dll~~g~ 83 (278)
.-+|||++||.|.++..+.+. |- ...|.++|+++.+++.-+.|...... ..+.... .....+|+++..+
T Consensus 113 ~~~VLDiG~G~G~~~~~la~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~D~V~~~~ 189 (277)
T 1o54_A 113 GDRIIDTGVGSGAMCAVLARAVGS-SGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG--FDEKDVDALFLDV 189 (277)
T ss_dssp TCEEEEECCTTSHHHHHHHHHTTT-TCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC--CSCCSEEEEEECC
T ss_pred CCEEEEECCcCCHHHHHHHHHhCC-CcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc--ccCCccCEEEECC
Confidence 458999999999999888776 42 24789999999999999988643221 1221111 1224689999877
Q ss_pred CCCCCCcccccCCCCCCCCchHHHHhhhcCCc-EEEEEeCCCc-----cchhhccCc
Q 023723 84 SPLLGNDDMTVITKHDQPDDSWDKLLESCDPV-ERFLEFSNSG-----DQVNTETGF 134 (278)
Q Consensus 84 PCq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~-~~i~Ev~~~~-----~~~l~~~GY 134 (278)
|+. ..++.++.+.++|. .++++..... .+.|++.||
T Consensus 190 ~~~---------------~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~gf 231 (277)
T 1o54_A 190 PDP---------------WNYIDKCWEALKGGGRFATVCPTTNQVQETLKKLQELPF 231 (277)
T ss_dssp SCG---------------GGTHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHSSE
T ss_pred cCH---------------HHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCC
Confidence 643 24566677778885 4445522111 455566666
No 83
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=95.86 E-value=0.023 Score=48.22 Aligned_cols=97 Identities=14% Similarity=0.028 Sum_probs=65.5
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCc---cccccccccccccCCCEEEeCCCCCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY---QAKRKPLSFRCQLLNNQLLRSPSPLL 87 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~---~~~~~~~~~~~~~~~Dll~~g~PCq~ 87 (278)
...+|||+-||.|.+...+...| ...|.++|+++.+++.-+.+.....+ ..+...+. .....+|++++......
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~l~~ 120 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHG--AKKVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIA-IEPDAYNVVLSSLALHY 120 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCC-CCTTCEEEEEEESCGGG
T ss_pred CCCEEEEECCCCCHHHHHHHHcC--CCEEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCC-CCCCCeEEEEEchhhhh
Confidence 46799999999999999999988 45889999999999999999863221 22222111 12357899998653222
Q ss_pred CCcccccCCCCCCCCchHHHHhhhcCCc-EEEEE
Q 023723 88 GNDDMTVITKHDQPDDSWDKLLESCDPV-ERFLE 120 (278)
Q Consensus 88 fS~ag~~~g~~d~r~~l~~~~i~~~~P~-~~i~E 120 (278)
+ .| ...++.++.+.++|. .+++.
T Consensus 121 ~---------~~-~~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 121 I---------AS-FDDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp C---------SC-HHHHHHHHHHHEEEEEEEEEE
T ss_pred h---------hh-HHHHHHHHHHHcCCCcEEEEE
Confidence 1 12 234566677778894 33443
No 84
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=95.86 E-value=0.017 Score=45.91 Aligned_cols=69 Identities=22% Similarity=0.209 Sum_probs=49.9
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCc------cccccccccccccCCCEEEeCCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY------QAKRKPLSFRCQLLNNQLLRSPS 84 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~------~~~~~~~~~~~~~~~Dll~~g~P 84 (278)
..-+|||+.||.|.++..+... ...+.++|+++.+++..+.|...... ..+... ......+|+++..++
T Consensus 35 ~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~--~~~~~~~D~i~~~~~ 109 (183)
T 2yxd_A 35 KDDVVVDVGCGSGGMTVEIAKR---CKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED--VLDKLEFNKAFIGGT 109 (183)
T ss_dssp TTCEEEEESCCCSHHHHHHHTT---SSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH--HGGGCCCSEEEECSC
T ss_pred CCCEEEEeCCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc--cccCCCCcEEEECCc
Confidence 3468999999999999998883 36889999999999998888632211 122111 112247999999877
No 85
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=95.85 E-value=0.015 Score=46.64 Aligned_cols=96 Identities=15% Similarity=0.081 Sum_probs=61.9
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCcc--------ccccccccccccCCCEEEeC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQ--------AKRKPLSFRCQLLNNQLLRS 82 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~~--------~~~~~~~~~~~~~~Dll~~g 82 (278)
...+|||+.||.|.+...+...+ ..+.++|+++.+++..+.|....... .+... ......+|+++..
T Consensus 52 ~~~~vLdiG~G~G~~~~~~~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~D~v~~~ 126 (194)
T 1dus_A 52 KDDDILDLGCGYGVIGIALADEV---KSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYE--NVKDRKYNKIITN 126 (194)
T ss_dssp TTCEEEEETCTTSHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTT--TCTTSCEEEEEEC
T ss_pred CCCeEEEeCCCCCHHHHHHHHcC---CeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhc--ccccCCceEEEEC
Confidence 45699999999999999888776 47899999999999988886432211 11111 1123468999987
Q ss_pred CCCCCCCcccccCCCCCCCCchHHHHhhhcCCc-EEEEE
Q 023723 83 PSPLLGNDDMTVITKHDQPDDSWDKLLESCDPV-ERFLE 120 (278)
Q Consensus 83 ~PCq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~-~~i~E 120 (278)
+|-.. +. +....++.++.+.++|. .+++.
T Consensus 127 ~~~~~--------~~-~~~~~~l~~~~~~L~~gG~l~~~ 156 (194)
T 1dus_A 127 PPIRA--------GK-EVLHRIIEEGKELLKDNGEIWVV 156 (194)
T ss_dssp CCSTT--------CH-HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCccc--------ch-hHHHHHHHHHHHHcCCCCEEEEE
Confidence 76431 00 11123455566668884 34444
No 86
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=95.85 E-value=0.0048 Score=55.62 Aligned_cols=75 Identities=5% Similarity=-0.064 Sum_probs=52.0
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCC----ceEEEEEcCCHHHHHHHHHHcCC----CC-ccccccccccccccCCCEEEe
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVS----AQVVEAFDINDKANDVYELNFGH----RP-YQAKRKPLSFRCQLLNNQLLR 81 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~----~~~v~a~e~~~~a~~~y~~N~~~----~~-~~~~~~~~~~~~~~~~Dll~~ 81 (278)
...+|+|++||.|++...+.+.... -..++++|+++.+.+.-+.|... .. ...+... ......+|++++
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~--~~~~~~fD~Ii~ 207 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLA--NLLVDPVDVVIS 207 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTS--CCCCCCEEEEEE
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECCCCC--ccccCCccEEEE
Confidence 4579999999999998877654311 15789999999999998888531 11 2222221 112357999999
Q ss_pred CCCCCC
Q 023723 82 SPSPLL 87 (278)
Q Consensus 82 g~PCq~ 87 (278)
.||..-
T Consensus 208 NPPfg~ 213 (344)
T 2f8l_A 208 DLPVGY 213 (344)
T ss_dssp ECCCSE
T ss_pred CCCCCC
Confidence 999743
No 87
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=95.80 E-value=0.012 Score=53.96 Aligned_cols=95 Identities=14% Similarity=0.029 Sum_probs=60.5
Q ss_pred CeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCcc---------ccccccccccccCCCEEEeCC
Q 023723 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQ---------AKRKPLSFRCQLLNNQLLRSP 83 (278)
Q Consensus 13 ~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~~---------~~~~~~~~~~~~~~Dll~~g~ 83 (278)
-+|+|++||.|.++..+...+- ...|.++|+++.+++.-+.|....... .+.. +......+|+|+..|
T Consensus 224 ~~VLDlGcG~G~~s~~la~~~p-~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~--~~~~~~~fD~Ii~np 300 (375)
T 4dcm_A 224 GEIVDLGCGNGVIGLTLLDKNP-QAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL--SGVEPFRFNAVLCNP 300 (375)
T ss_dssp SEEEEETCTTCHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTT--TTCCTTCEEEEEECC
T ss_pred CeEEEEeCcchHHHHHHHHHCC-CCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhh--ccCCCCCeeEEEECC
Confidence 6999999999999999988742 257899999999999888887532211 1111 112234799999999
Q ss_pred CCCCCCcccccCCCCCC-CCchHHHHhhhcCCcE
Q 023723 84 SPLLGNDDMTVITKHDQ-PDDSWDKLLESCDPVE 116 (278)
Q Consensus 84 PCq~fS~ag~~~g~~d~-r~~l~~~~i~~~~P~~ 116 (278)
|...... ..+. ...++.++.+.++|.-
T Consensus 301 pfh~~~~------~~~~~~~~~l~~~~~~LkpgG 328 (375)
T 4dcm_A 301 PFHQQHA------LTDNVAWEMFHHARRCLKING 328 (375)
T ss_dssp CC-------------CCHHHHHHHHHHHHEEEEE
T ss_pred CcccCcc------cCHHHHHHHHHHHHHhCCCCc
Confidence 9643111 1111 1134555666688853
No 88
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=95.74 E-value=0.008 Score=55.39 Aligned_cols=95 Identities=12% Similarity=0.165 Sum_probs=57.6
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCc-------------------------------------eEEEEEcCCHHHHHHHHH
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSA-------------------------------------QVVEAFDINDKANDVYEL 54 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~-------------------------------------~~v~a~e~~~~a~~~y~~ 54 (278)
.-.++|.|||.|++..-+-..+.+. -.|+++|+|+.+++.-+.
T Consensus 195 ~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~Ar~ 274 (384)
T 3ldg_A 195 DKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIARK 274 (384)
T ss_dssp TSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHH
T ss_pred CCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHHHH
Confidence 4689999999999875433322110 238999999999999999
Q ss_pred HcCCCCcc-------ccccccccccccCCCEEEeCCCCCCCCcccccCCCCCCCCchHHHHhhhcCC
Q 023723 55 NFGHRPYQ-------AKRKPLSFRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDP 114 (278)
Q Consensus 55 N~~~~~~~-------~~~~~~~~~~~~~~Dll~~g~PCq~fS~ag~~~g~~d~r~~l~~~~i~~~~P 114 (278)
|.....+. .+..... ....+|+|+.-||- |.+.+....-..+|.++.+..++
T Consensus 275 Na~~~gl~~~I~~~~~D~~~l~--~~~~fD~Iv~NPPY------G~rl~~~~~l~~ly~~lg~~lk~ 333 (384)
T 3ldg_A 275 NAREVGLEDVVKLKQMRLQDFK--TNKINGVLISNPPY------GERLLDDKAVDILYNEMGETFAP 333 (384)
T ss_dssp HHHHTTCTTTEEEEECCGGGCC--CCCCSCEEEECCCC------TTTTSCHHHHHHHHHHHHHHHTT
T ss_pred HHHHcCCCCceEEEECChHHCC--ccCCcCEEEECCch------hhccCCHHHHHHHHHHHHHHHhh
Confidence 86433221 2211111 12379999999995 44433222223456555555544
No 89
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=95.72 E-value=0.041 Score=46.71 Aligned_cols=87 Identities=9% Similarity=-0.019 Sum_probs=60.0
Q ss_pred CCCeEEeeecchhhHHHHHHhc-CCCceEEEEEcCCHHHHHHHHHHcCCC-----C--ccccccccccccccCCCEEEeC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFGHR-----P--YQAKRKPLSFRCQLLNNQLLRS 82 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~a-G~~~~~v~a~e~~~~a~~~y~~N~~~~-----~--~~~~~~~~~~~~~~~~Dll~~g 82 (278)
..-+|+|+.||.|.+...+... |- ...|.++|+++.+.+.-+.|+... . ...+.. +......+|+++..
T Consensus 93 ~~~~vldiG~G~G~~~~~l~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~--~~~~~~~~D~v~~~ 169 (255)
T 3mb5_A 93 PGDFIVEAGVGSGALTLFLANIVGP-EGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIY--EGIEEENVDHVILD 169 (255)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCT-TSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGG--GCCCCCSEEEEEEC
T ss_pred CCCEEEEecCCchHHHHHHHHHhCC-CeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchh--hccCCCCcCEEEEC
Confidence 3468999999999999998877 42 257899999999999888886221 1 122222 11223469999987
Q ss_pred CCCCCCCcccccCCCCCCCCchHHHHhhhcCCc
Q 023723 83 PSPLLGNDDMTVITKHDQPDDSWDKLLESCDPV 115 (278)
Q Consensus 83 ~PCq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~ 115 (278)
+|+. ..++.++.+.++|.
T Consensus 170 ~~~~---------------~~~l~~~~~~L~~g 187 (255)
T 3mb5_A 170 LPQP---------------ERVVEHAAKALKPG 187 (255)
T ss_dssp SSCG---------------GGGHHHHHHHEEEE
T ss_pred CCCH---------------HHHHHHHHHHcCCC
Confidence 6632 24566677788884
No 90
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=95.71 E-value=0.028 Score=47.39 Aligned_cols=99 Identities=9% Similarity=-0.040 Sum_probs=65.8
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCc---ccccccccccc----ccCCCEEEeCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY---QAKRKPLSFRC----QLLNNQLLRSP 83 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~---~~~~~~~~~~~----~~~~Dll~~g~ 83 (278)
...+|||+-||.|.+...+...| . .|.++|+++.+++..+++.+...+ ..+........ ...+|+++...
T Consensus 56 ~~~~vLD~GcG~G~~~~~la~~~--~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~ 132 (245)
T 3ggd_A 56 PELPLIDFACGNGTQTKFLSQFF--P-RVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMRT 132 (245)
T ss_dssp TTSCEEEETCTTSHHHHHHHHHS--S-CEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEES
T ss_pred CCCeEEEEcCCCCHHHHHHHHhC--C-CEEEEECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEEEEcc
Confidence 45689999999999999998888 3 678999999999999999864331 22222111111 12389998875
Q ss_pred CCCCCCcccccCCCCCCCCchHHHHhhhcCCc--EEEEE
Q 023723 84 SPLLGNDDMTVITKHDQPDDSWDKLLESCDPV--ERFLE 120 (278)
Q Consensus 84 PCq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~--~~i~E 120 (278)
...-++. +....++.++.+.++|. ++++|
T Consensus 133 ~~~~~~~--------~~~~~~l~~~~~~LkpgG~l~i~~ 163 (245)
T 3ggd_A 133 GFHHIPV--------EKRELLGQSLRILLGKQGAMYLIE 163 (245)
T ss_dssp SSTTSCG--------GGHHHHHHHHHHHHTTTCEEEEEE
T ss_pred hhhcCCH--------HHHHHHHHHHHHHcCCCCEEEEEe
Confidence 4433211 12234666677889994 56666
No 91
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=95.71 E-value=0.011 Score=53.90 Aligned_cols=73 Identities=15% Similarity=0.004 Sum_probs=52.5
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCc-------cccccccccccccCCCEEEeCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-------QAKRKPLSFRCQLLNNQLLRSP 83 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~-------~~~~~~~~~~~~~~~Dll~~g~ 83 (278)
..-+++|++||.|++..-+...+. +..|.++|+++.+++.-+.|.....+ ..+...+. .....+|+++..|
T Consensus 217 ~~~~vLD~gCGsG~~~i~~a~~~~-~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~-~~~~~fD~Ii~np 294 (373)
T 3tm4_A 217 DGGSVLDPMCGSGTILIELALRRY-SGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLS-QYVDSVDFAISNL 294 (373)
T ss_dssp CSCCEEETTCTTCHHHHHHHHTTC-CSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGG-GTCSCEEEEEEEC
T ss_pred CCCEEEEccCcCcHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCC-cccCCcCEEEECC
Confidence 346899999999999988887773 23789999999999999998743322 22222111 1124689999999
Q ss_pred CC
Q 023723 84 SP 85 (278)
Q Consensus 84 PC 85 (278)
|-
T Consensus 295 Py 296 (373)
T 3tm4_A 295 PY 296 (373)
T ss_dssp CC
T ss_pred CC
Confidence 95
No 92
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=95.70 E-value=0.031 Score=47.56 Aligned_cols=102 Identities=9% Similarity=-0.004 Sum_probs=59.5
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcC-------------CCC-ccccccc-cc-ccccc
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG-------------HRP-YQAKRKP-LS-FRCQL 74 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~-------------~~~-~~~~~~~-~~-~~~~~ 74 (278)
..-+|||++||.|++.+.+...+- -..|.++|+++.+++.-+.|.. +.. +..+... +. ..+..
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~ 127 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFP-EDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKG 127 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHST-TSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTT
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCC-CCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcccc
Confidence 356899999999999999888762 2378999999998887766532 111 1222221 11 12234
Q ss_pred CCCEEEeCCCCCCCCcccccCCCCCCCCchHHHHhhhcCCc
Q 023723 75 LNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPV 115 (278)
Q Consensus 75 ~~Dll~~g~PCq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~ 115 (278)
.+|.++.-+|...+-.....+.. ....++.++.+.++|.
T Consensus 128 ~~d~v~~~~p~p~~k~~~~~~r~--~~~~~l~~~~~~Lkpg 166 (246)
T 2vdv_E 128 QLSKMFFCFPDPHFKQRKHKARI--ITNTLLSEYAYVLKEG 166 (246)
T ss_dssp CEEEEEEESCCCC------CSSC--CCHHHHHHHHHHEEEE
T ss_pred ccCEEEEECCCcccccchhHHhh--ccHHHHHHHHHHcCCC
Confidence 67888777776433211111001 1124555677778886
No 93
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=95.68 E-value=0.011 Score=52.66 Aligned_cols=75 Identities=11% Similarity=0.101 Sum_probs=51.9
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCC--C---cccccccccc-c---cccCCCEEEeC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHR--P---YQAKRKPLSF-R---CQLLNNQLLRS 82 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~--~---~~~~~~~~~~-~---~~~~~Dll~~g 82 (278)
.-++||++||.||.+..+-...- -..|.++|+|+.+++.-+.|.... . +..+...+.. . ....+|.++..
T Consensus 27 g~~vLD~g~G~G~~s~~la~~~~-~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~~l~~~g~~~~D~Vl~D 105 (301)
T 1m6y_A 27 EKIILDCTVGEGGHSRAILEHCP-GCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKTLGIEKVDGILMD 105 (301)
T ss_dssp TCEEEETTCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHHHTTCSCEEEEEEE
T ss_pred CCEEEEEeCCcCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHHHHHhcCCCCCCEEEEc
Confidence 45899999999999998876521 147899999999999999987432 1 1222221111 1 11469999999
Q ss_pred CCCCC
Q 023723 83 PSPLL 87 (278)
Q Consensus 83 ~PCq~ 87 (278)
+||..
T Consensus 106 ~gvSs 110 (301)
T 1m6y_A 106 LGVST 110 (301)
T ss_dssp CSCCH
T ss_pred Cccch
Confidence 98853
No 94
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=95.66 E-value=0.013 Score=51.82 Aligned_cols=102 Identities=8% Similarity=-0.011 Sum_probs=60.7
Q ss_pred CCeEEeeecchhhHHHHHHhc-CCCceEEEEEcCCHHHHHHHHHHcCC-------CC---ccccccccccccccCCCEEE
Q 023723 12 AWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFGH-------RP---YQAKRKPLSFRCQLLNNQLL 80 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~a-G~~~~~v~a~e~~~~a~~~y~~N~~~-------~~---~~~~~~~~~~~~~~~~Dll~ 80 (278)
.-+|||+.||.|++...+.+. + ...|.++|+++.+++.-+.|++. .. +..|....-......+|+|+
T Consensus 91 ~~~VLdiG~G~G~~~~~l~~~~~--~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 91 PKKVLIIGGGDGGTLREVLKHDS--VEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp CCEEEEEECTTCHHHHHHTTSTT--CSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHhcCC--CCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEE
Confidence 468999999999999888776 4 46889999999999999999843 11 11221111011124689999
Q ss_pred eCCCCCCCCcccccCCCCCCCCchHHHHhhhcCCc-EEEEE
Q 023723 81 RSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPV-ERFLE 120 (278)
Q Consensus 81 ~g~PCq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~-~~i~E 120 (278)
..+|+.... ..... .....+..+.+.++|. +++++
T Consensus 169 ~d~~~~~~~---~~~~l--~~~~~l~~~~~~LkpgG~lv~~ 204 (296)
T 1inl_A 169 IDSTDPTAG---QGGHL--FTEEFYQACYDALKEDGVFSAE 204 (296)
T ss_dssp EEC-------------C--CSHHHHHHHHHHEEEEEEEEEE
T ss_pred EcCCCcccC---chhhh--hHHHHHHHHHHhcCCCcEEEEE
Confidence 988874221 11101 1123444456668885 45555
No 95
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=95.66 E-value=0.036 Score=45.87 Aligned_cols=99 Identities=11% Similarity=0.030 Sum_probs=65.3
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCcc-----------ccccccccccccCCCEE
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQ-----------AKRKPLSFRCQLLNNQL 79 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~~-----------~~~~~~~~~~~~~~Dll 79 (278)
...+|||+.||.|.+...+.+.+- ...|.++|+++.+++..+.|+...... .+.. ........+|++
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~-~~~~~~~~fD~v 106 (217)
T 3jwh_A 29 NARRVIDLGCGQGNLLKILLKDSF-FEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALT-YQDKRFHGYDAA 106 (217)
T ss_dssp TCCEEEEETCTTCHHHHHHHHCTT-CSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTT-SCCGGGCSCSEE
T ss_pred CCCEEEEeCCCCCHHHHHHHhhCC-CCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcc-cccccCCCcCEE
Confidence 346999999999999999988762 358899999999999999997643321 1111 111122478999
Q ss_pred EeCCCCCCCCcccccCCCCCC-CCchHHHHhhhcCCcEEEEE
Q 023723 80 LRSPSPLLGNDDMTVITKHDQ-PDDSWDKLLESCDPVERFLE 120 (278)
Q Consensus 80 ~~g~PCq~fS~ag~~~g~~d~-r~~l~~~~i~~~~P~~~i~E 120 (278)
+......- ..++ ...++.++.+.++|.-+++-
T Consensus 107 ~~~~~l~~---------~~~~~~~~~l~~~~~~LkpgG~li~ 139 (217)
T 3jwh_A 107 TVIEVIEH---------LDLSRLGAFERVLFEFAQPKIVIVT 139 (217)
T ss_dssp EEESCGGG---------CCHHHHHHHHHHHHTTTCCSEEEEE
T ss_pred eeHHHHHc---------CCHHHHHHHHHHHHHHcCCCEEEEE
Confidence 96543221 1111 12455556777999876665
No 96
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=95.58 E-value=0.016 Score=50.25 Aligned_cols=93 Identities=12% Similarity=0.058 Sum_probs=63.1
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCc-----cccccccccccccCCCEEEeCCCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-----QAKRKPLSFRCQLLNNQLLRSPSP 85 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~-----~~~~~~~~~~~~~~~Dll~~g~PC 85 (278)
...+|||+.||.|.+...+...| . .|.++|+++.+++..+.|...... ..+...... ...+|+++...+.
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~g--~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~--~~~fD~i~~~~~~ 194 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLLG--Y-DVTSWDHNENSIAFLNETKEKENLNISTALYDINAANI--QENYDFIVSTVVF 194 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHTT--C-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCC--CSCEEEEEECSSG
T ss_pred CCCcEEEECCCCCHHHHHHHHCC--C-eEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccc--cCCccEEEEccch
Confidence 45789999999999999999988 3 689999999999988887653221 222221111 4579999988764
Q ss_pred CCCCcccccCCCCCCCCchHHHHhhhcCCcE
Q 023723 86 LLGNDDMTVITKHDQPDDSWDKLLESCDPVE 116 (278)
Q Consensus 86 q~fS~ag~~~g~~d~r~~l~~~~i~~~~P~~ 116 (278)
.-++. +....++.++.+.++|.-
T Consensus 195 ~~~~~--------~~~~~~l~~~~~~LkpgG 217 (286)
T 3m70_A 195 MFLNR--------ERVPSIIKNMKEHTNVGG 217 (286)
T ss_dssp GGSCG--------GGHHHHHHHHHHTEEEEE
T ss_pred hhCCH--------HHHHHHHHHHHHhcCCCc
Confidence 43211 112245566777789953
No 97
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=95.55 E-value=0.029 Score=44.42 Aligned_cols=93 Identities=12% Similarity=-0.045 Sum_probs=64.3
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCc-cccccccccccccCCCEEEeCCCCCCCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-QAKRKPLSFRCQLLNNQLLRSPSPLLGN 89 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~-~~~~~~~~~~~~~~~Dll~~g~PCq~fS 89 (278)
...+|||+-||.|.+...+...+ ..+.++|+++.+++..+.+.++..+ ..+ . ......+|+++....-..+
T Consensus 17 ~~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~v~~~~~d-~---~~~~~~~D~v~~~~~l~~~- 88 (170)
T 3i9f_A 17 KKGVIVDYGCGNGFYCKYLLEFA---TKLYCIDINVIALKEVKEKFDSVITLSDP-K---EIPDNSVDFILFANSFHDM- 88 (170)
T ss_dssp CCEEEEEETCTTCTTHHHHHTTE---EEEEEECSCHHHHHHHHHHCTTSEEESSG-G---GSCTTCEEEEEEESCSTTC-
T ss_pred CCCeEEEECCCCCHHHHHHHhhc---CeEEEEeCCHHHHHHHHHhCCCcEEEeCC-C---CCCCCceEEEEEccchhcc-
Confidence 35689999999999999999887 3889999999999999999554432 222 1 1223468999976543322
Q ss_pred cccccCCCCCCCCchHHHHhhhcCCc--EEEEE
Q 023723 90 DDMTVITKHDQPDDSWDKLLESCDPV--ERFLE 120 (278)
Q Consensus 90 ~ag~~~g~~d~r~~l~~~~i~~~~P~--~~i~E 120 (278)
. ....++.++.+.++|. +++.+
T Consensus 89 --------~-~~~~~l~~~~~~L~pgG~l~~~~ 112 (170)
T 3i9f_A 89 --------D-DKQHVISEVKRILKDDGRVIIID 112 (170)
T ss_dssp --------S-CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --------c-CHHHHHHHHHHhcCCCCEEEEEE
Confidence 1 2234566677778883 44444
No 98
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=95.53 E-value=0.013 Score=51.72 Aligned_cols=44 Identities=11% Similarity=0.132 Sum_probs=38.9
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG 57 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~ 57 (278)
..-.|||+|||.|...+++...| ..+.++|+++.+++.-+.|..
T Consensus 235 ~~~~vlD~f~GsGt~~~~a~~~g---~~~~g~e~~~~~~~~a~~r~~ 278 (297)
T 2zig_A 235 VGDVVLDPFAGTGTTLIAAARWG---RRALGVELVPRYAQLAKERFA 278 (297)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHH
T ss_pred CCCEEEECCCCCCHHHHHHHHcC---CeEEEEeCCHHHHHHHHHHHH
Confidence 34589999999999999999999 468899999999999888864
No 99
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=95.48 E-value=0.036 Score=45.59 Aligned_cols=96 Identities=15% Similarity=0.084 Sum_probs=64.4
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCccccccccccccccCCCEEEeCCCCCCCCcc
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQAKRKPLSFRCQLLNNQLLRSPSPLLGNDD 91 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~~~~~~~~~~~~~~~~Dll~~g~PCq~fS~a 91 (278)
.-+|||+.||.|.+...+...|. .|.++|+++.+++..+.+..-.....+..... ....+|++++......+.
T Consensus 44 ~~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~d~~~~~--~~~~fD~v~~~~~l~~~~-- 116 (211)
T 3e23_A 44 GAKILELGCGAGYQAEAMLAAGF---DVDATDGSPELAAEASRRLGRPVRTMLFHQLD--AIDAYDAVWAHACLLHVP-- 116 (211)
T ss_dssp TCEEEESSCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHTSCCEECCGGGCC--CCSCEEEEEECSCGGGSC--
T ss_pred CCcEEEECCCCCHHHHHHHHcCC---eEEEECCCHHHHHHHHHhcCCceEEeeeccCC--CCCcEEEEEecCchhhcC--
Confidence 56999999999999999988883 67899999999999999874333333322222 345799999864332211
Q ss_pred cccCCCCCCCCchHHHHhhhcCCc-EEEEE
Q 023723 92 MTVITKHDQPDDSWDKLLESCDPV-ERFLE 120 (278)
Q Consensus 92 g~~~g~~d~r~~l~~~~i~~~~P~-~~i~E 120 (278)
.+....++.++.+.++|. .+++.
T Consensus 117 ------~~~~~~~l~~~~~~LkpgG~l~~~ 140 (211)
T 3e23_A 117 ------RDELADVLKLIWRALKPGGLFYAS 140 (211)
T ss_dssp ------HHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ------HHHHHHHHHHHHHhcCCCcEEEEE
Confidence 012234566677778885 33444
No 100
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=95.47 E-value=0.031 Score=45.94 Aligned_cols=73 Identities=14% Similarity=0.022 Sum_probs=51.5
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCc------cccccccccccccCCCEEEeCCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY------QAKRKPLSFRCQLLNNQLLRSPS 84 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~------~~~~~~~~~~~~~~~Dll~~g~P 84 (278)
...+|||+.||.|.+...+...+ ..|.++|+++.+++.-+.|+....+ ..+.... ......+|+++....
T Consensus 77 ~~~~vLdiG~G~G~~~~~la~~~---~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~-~~~~~~~D~i~~~~~ 152 (210)
T 3lbf_A 77 PQSRVLEIGTGSGYQTAILAHLV---QHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQG-WQARAPFDAIIVTAA 152 (210)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC-CGGGCCEEEEEESSB
T ss_pred CCCEEEEEcCCCCHHHHHHHHhC---CEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccC-CccCCCccEEEEccc
Confidence 45689999999999998888876 4789999999999998888643221 1221111 112357899999765
Q ss_pred CCC
Q 023723 85 PLL 87 (278)
Q Consensus 85 Cq~ 87 (278)
+..
T Consensus 153 ~~~ 155 (210)
T 3lbf_A 153 PPE 155 (210)
T ss_dssp CSS
T ss_pred hhh
Confidence 533
No 101
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=95.44 E-value=0.018 Score=50.39 Aligned_cols=101 Identities=9% Similarity=0.020 Sum_probs=63.7
Q ss_pred CCCeEEeeecchhhHHHHHHhc-CCCceEEEEEcCCHHHHHHHHHHcCCC-------C---ccccccc-cccccccCCCE
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFGHR-------P---YQAKRKP-LSFRCQLLNNQ 78 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~a-G~~~~~v~a~e~~~~a~~~y~~N~~~~-------~---~~~~~~~-~~~~~~~~~Dl 78 (278)
+.-+|||+.+|.|++...+.+. + ...|.++|+|+.+++.-+.|++.. . +..|... +.. ....+|+
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~--~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~-~~~~fD~ 151 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPS--VKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAK-SENQYDV 151 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTT--CSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHT-CCSCEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCC--CceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhh-CCCCeeE
Confidence 3568999999999999888766 5 468999999999999999998421 1 1122111 111 1246999
Q ss_pred EEeCCCCCCCCcccccCCCCCCCCchHHHHhhhcCCc-EEEEE
Q 023723 79 LLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPV-ERFLE 120 (278)
Q Consensus 79 l~~g~PCq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~-~~i~E 120 (278)
|+..+|. ++.. ...+ -....+..+.+.++|. +++++
T Consensus 152 Ii~d~~~-~~~~---~~~l--~~~~~~~~~~~~L~pgG~lv~~ 188 (275)
T 1iy9_A 152 IMVDSTE-PVGP---AVNL--FTKGFYAGIAKALKEDGIFVAQ 188 (275)
T ss_dssp EEESCSS-CCSC---CCCC--STTHHHHHHHHHEEEEEEEEEE
T ss_pred EEECCCC-CCCc---chhh--hHHHHHHHHHHhcCCCcEEEEE
Confidence 9998774 2211 1101 1123445566678886 44444
No 102
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=95.43 E-value=0.033 Score=46.27 Aligned_cols=96 Identities=14% Similarity=0.002 Sum_probs=61.2
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCcc-------ccccc-ccccc---ccCCCEEE
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQ-------AKRKP-LSFRC---QLLNNQLL 80 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~~-------~~~~~-~~~~~---~~~~Dll~ 80 (278)
.-+|||+.||.|..+..+..+--+...|.++|+++...+.-+.|+....+. .+... +.... ...+|+++
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~v~ 138 (223)
T 3duw_A 59 ARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDFIF 138 (223)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSEEE
T ss_pred CCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCEEE
Confidence 468999999999999998876100137899999999999988887432221 11111 11110 14699999
Q ss_pred eCCCCCCCCcccccCCCCCCCCchHHHHhhhcCCc-EEEEE
Q 023723 81 RSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPV-ERFLE 120 (278)
Q Consensus 81 ~g~PCq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~-~~i~E 120 (278)
...+|..+ ...+.++.+.++|. ++++.
T Consensus 139 ~d~~~~~~-------------~~~l~~~~~~L~pgG~lv~~ 166 (223)
T 3duw_A 139 IDADKQNN-------------PAYFEWALKLSRPGTVIIGD 166 (223)
T ss_dssp ECSCGGGH-------------HHHHHHHHHTCCTTCEEEEE
T ss_pred EcCCcHHH-------------HHHHHHHHHhcCCCcEEEEe
Confidence 87663311 13445566778885 55566
No 103
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=95.38 E-value=0.039 Score=46.13 Aligned_cols=97 Identities=12% Similarity=0.020 Sum_probs=64.8
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCc---cccccccccccccCCCEEEeCCCCCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY---QAKRKPLSFRCQLLNNQLLRSPSPLL 87 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~---~~~~~~~~~~~~~~~Dll~~g~PCq~ 87 (278)
...+|||+.||.|.+...+...| ...+.++|+++.+++.-+.+.....+ ..+..... .....+|+++.......
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~l~~ 119 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHEHG--ASYVLGLDLSEKMLARARAAGPDTGITYERADLDKLH-LPQDSFDLAYSSLALHY 119 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTT--CSEEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCC-CCTTCEEEEEEESCGGG
T ss_pred CCCEEEEEcCcCCHHHHHHHHCC--CCeEEEEcCCHHHHHHHHHhcccCCceEEEcChhhcc-CCCCCceEEEEeccccc
Confidence 45699999999999999998888 44789999999999999998865321 22221111 12346899997654322
Q ss_pred CCcccccCCCCCCCCchHHHHhhhcCCc-EEEEE
Q 023723 88 GNDDMTVITKHDQPDDSWDKLLESCDPV-ERFLE 120 (278)
Q Consensus 88 fS~ag~~~g~~d~r~~l~~~~i~~~~P~-~~i~E 120 (278)
+ . ....++.++.+.++|. .+++.
T Consensus 120 ~---------~-~~~~~l~~~~~~L~pgG~l~~~ 143 (243)
T 3bkw_A 120 V---------E-DVARLFRTVHQALSPGGHFVFS 143 (243)
T ss_dssp C---------S-CHHHHHHHHHHHEEEEEEEEEE
T ss_pred c---------c-hHHHHHHHHHHhcCcCcEEEEE
Confidence 1 1 1234566677778885 34444
No 104
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=95.37 E-value=0.064 Score=45.06 Aligned_cols=91 Identities=16% Similarity=0.071 Sum_probs=60.2
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCc-------cccccccccccccCCCEEEeCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-------QAKRKPLSFRCQLLNNQLLRSP 83 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~-------~~~~~~~~~~~~~~~Dll~~g~ 83 (278)
..-+|+|+.||.|.+...+.+.+ ..|.++|+++.+.+.-+.|.....+ ..+..... .....+|+++..+
T Consensus 91 ~~~~vldiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~D~v~~~~ 166 (248)
T 2yvl_A 91 KEKRVLEFGTGSGALLAVLSEVA---GEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAE-VPEGIFHAAFVDV 166 (248)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHS---SEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSC-CCTTCBSEEEECS
T ss_pred CCCEEEEeCCCccHHHHHHHHhC---CEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcc-cCCCcccEEEECC
Confidence 34689999999999998887765 4789999999999998888632211 12211110 0224689999855
Q ss_pred CCCCCCcccccCCCCCCCCchHHHHhhhcCCc-EEEEE
Q 023723 84 SPLLGNDDMTVITKHDQPDDSWDKLLESCDPV-ERFLE 120 (278)
Q Consensus 84 PCq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~-~~i~E 120 (278)
| + ....+.++.+.++|. .++++
T Consensus 167 ~--------------~-~~~~l~~~~~~L~~gG~l~~~ 189 (248)
T 2yvl_A 167 R--------------E-PWHYLEKVHKSLMEGAPVGFL 189 (248)
T ss_dssp S--------------C-GGGGHHHHHHHBCTTCEEEEE
T ss_pred c--------------C-HHHHHHHHHHHcCCCCEEEEE
Confidence 4 1 124556677778885 45555
No 105
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=95.37 E-value=0.032 Score=46.18 Aligned_cols=97 Identities=13% Similarity=0.097 Sum_probs=62.0
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcC----CCC-ccccccccccccccCCCEEEeCCCCC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG----HRP-YQAKRKPLSFRCQLLNNQLLRSPSPL 86 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~----~~~-~~~~~~~~~~~~~~~~Dll~~g~PCq 86 (278)
..+|||+.||.|.+...+...| . .+.++|+++.+++..+.|.. +.. ...+..... .....+|+++...+..
T Consensus 39 ~~~vLDlG~G~G~~~~~l~~~~--~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-~~~~~~D~v~~~~~~~ 114 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLEDYG--F-EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLS-FEDKTFDYVIFIDSIV 114 (227)
T ss_dssp CCEEEEETCTTSHHHHHHHHTT--C-EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCC-SCTTCEEEEEEESCGG
T ss_pred CCeEEEEeccCCHHHHHHHHcC--C-EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCC-CCCCcEEEEEEcCchH
Confidence 5699999999999999999888 2 78999999999888887762 222 222222211 1224689999876622
Q ss_pred CCCcccccCCCCCCCCchHHHHhhhcCCc-EEEEE
Q 023723 87 LGNDDMTVITKHDQPDDSWDKLLESCDPV-ERFLE 120 (278)
Q Consensus 87 ~fS~ag~~~g~~d~r~~l~~~~i~~~~P~-~~i~E 120 (278)
-+.. . ....++.++.+.++|. .+++.
T Consensus 115 ~~~~-------~-~~~~~l~~~~~~L~~gG~l~~~ 141 (227)
T 1ve3_A 115 HFEP-------L-ELNQVFKEVRRVLKPSGKFIMY 141 (227)
T ss_dssp GCCH-------H-HHHHHHHHHHHHEEEEEEEEEE
T ss_pred hCCH-------H-HHHHHHHHHHHHcCCCcEEEEE
Confidence 1111 0 1123555566778885 34444
No 106
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=95.36 E-value=0.022 Score=46.56 Aligned_cols=72 Identities=15% Similarity=0.152 Sum_probs=52.0
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCC----ccccccccccccccCCCEEEeCCCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP----YQAKRKPLSFRCQLLNNQLLRSPSP 85 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~----~~~~~~~~~~~~~~~~Dll~~g~PC 85 (278)
...+|||+.||.|.+...+...| ...|.++|+++.+++.-+.|..... ...+..... .....+|+++...+.
T Consensus 42 ~~~~vLdiGcG~G~~~~~l~~~~--~~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~-~~~~~fD~v~~~~~~ 117 (215)
T 2pxx_A 42 PEDRILVLGCGNSALSYELFLGG--FPNVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLD-FPSASFDVVLEKGTL 117 (215)
T ss_dssp TTCCEEEETCTTCSHHHHHHHTT--CCCEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCC-SCSSCEEEEEEESHH
T ss_pred CCCeEEEECCCCcHHHHHHHHcC--CCcEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCC-CCCCcccEEEECcch
Confidence 45689999999999999999888 3478999999999999999986421 122222221 122468999976553
No 107
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=95.31 E-value=0.1 Score=43.41 Aligned_cols=107 Identities=7% Similarity=-0.097 Sum_probs=64.1
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCC-----C-ccccccccc-cccccCCCEEEeCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHR-----P-YQAKRKPLS-FRCQLLNNQLLRSP 83 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~-----~-~~~~~~~~~-~~~~~~~Dll~~g~ 83 (278)
..-+|||+.||.|.+...+....- -..+.++|+++.+++.-+.|.... . +..+...+. ......+|.++..+
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p-~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~ 116 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNP-DINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNF 116 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCT-TSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEES
T ss_pred CCceEEEEecCCCHHHHHHHHHCC-CCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEEC
Confidence 356899999999999998876621 247889999999998888775211 1 222222221 12234689998877
Q ss_pred CCCCCCcccccCCCCCCCCchHHHHhhhcCCc-EEEEE
Q 023723 84 SPLLGNDDMTVITKHDQPDDSWDKLLESCDPV-ERFLE 120 (278)
Q Consensus 84 PCq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~-~~i~E 120 (278)
|+.-+......+.. ....++.++.+.++|. .++++
T Consensus 117 ~~p~~~~~~~~~rl--~~~~~l~~~~~~LkpgG~l~~~ 152 (213)
T 2fca_A 117 SDPWPKKRHEKRRL--TYSHFLKKYEEVMGKGGSIHFK 152 (213)
T ss_dssp CCCCCSGGGGGGST--TSHHHHHHHHHHHTTSCEEEEE
T ss_pred CCCCcCcccccccc--CcHHHHHHHHHHcCCCCEEEEE
Confidence 75432211111101 1123455566778995 55566
No 108
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=95.27 E-value=0.035 Score=47.34 Aligned_cols=97 Identities=12% Similarity=0.027 Sum_probs=64.4
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCC-ccccccccccccccCCCEEEeCC-CCCCCC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP-YQAKRKPLSFRCQLLNNQLLRSP-SPLLGN 89 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~-~~~~~~~~~~~~~~~~Dll~~g~-PCq~fS 89 (278)
..+|||+.||.|.+...+...| ..|.++|+++.+++.-+.+.+... +..+...... ...+|+++... .-.-+.
T Consensus 51 ~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~--~~~fD~v~~~~~~l~~~~ 125 (263)
T 3pfg_A 51 AASLLDVACGTGMHLRHLADSF---GTVEGLELSADMLAIARRRNPDAVLHHGDMRDFSL--GRRFSAVTCMFSSIGHLA 125 (263)
T ss_dssp CCEEEEETCTTSHHHHHHTTTS---SEEEEEESCHHHHHHHHHHCTTSEEEECCTTTCCC--SCCEEEEEECTTGGGGSC
T ss_pred CCcEEEeCCcCCHHHHHHHHcC---CeEEEEECCHHHHHHHHhhCCCCEEEECChHHCCc--cCCcCEEEEcCchhhhcC
Confidence 4789999999999999999888 268899999999999999987543 2333222222 35789999764 211110
Q ss_pred cccccCCCCCCCCchHHHHhhhcCCc-EEEEE
Q 023723 90 DDMTVITKHDQPDDSWDKLLESCDPV-ERFLE 120 (278)
Q Consensus 90 ~ag~~~g~~d~r~~l~~~~i~~~~P~-~~i~E 120 (278)
. . +....++.++.+.++|. .++++
T Consensus 126 ~------~-~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 126 G------Q-AELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp H------H-HHHHHHHHHHHHTEEEEEEEEEC
T ss_pred C------H-HHHHHHHHHHHHhcCCCcEEEEE
Confidence 0 0 11223455667778884 55555
No 109
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=95.25 E-value=0.045 Score=45.01 Aligned_cols=95 Identities=13% Similarity=-0.010 Sum_probs=62.8
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCcccccccc---ccccccCCCEEEeCCCCCCC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQAKRKPL---SFRCQLLNNQLLRSPSPLLG 88 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~~~~~~~~---~~~~~~~~Dll~~g~PCq~f 88 (278)
..+|||+-||.|.+...+...| . .|.++|+++.+++..+.+........+.... .......+|+++....-.
T Consensus 53 ~~~vLdiG~G~G~~~~~l~~~~--~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~-- 127 (227)
T 3e8s_A 53 PERVLDLGCGEGWLLRALADRG--I-EAVGVDGDRTLVDAARAAGAGEVHLASYAQLAEAKVPVGKDYDLICANFALL-- 127 (227)
T ss_dssp CSEEEEETCTTCHHHHHHHTTT--C-EEEEEESCHHHHHHHHHTCSSCEEECCHHHHHTTCSCCCCCEEEEEEESCCC--
T ss_pred CCEEEEeCCCCCHHHHHHHHCC--C-EEEEEcCCHHHHHHHHHhcccccchhhHHhhcccccccCCCccEEEECchhh--
Confidence 4799999999999999998888 3 6889999999999998882222222221111 111223499999865433
Q ss_pred CcccccCCCCCCCCchHHHHhhhcCCc-EEEEE
Q 023723 89 NDDMTVITKHDQPDDSWDKLLESCDPV-ERFLE 120 (278)
Q Consensus 89 S~ag~~~g~~d~r~~l~~~~i~~~~P~-~~i~E 120 (278)
. .....++.++.+.++|. .+++.
T Consensus 128 --------~-~~~~~~l~~~~~~L~pgG~l~~~ 151 (227)
T 3e8s_A 128 --------H-QDIIELLSAMRTLLVPGGALVIQ 151 (227)
T ss_dssp --------S-SCCHHHHHHHHHTEEEEEEEEEE
T ss_pred --------h-hhHHHHHHHHHHHhCCCeEEEEE
Confidence 1 22335666777788994 44444
No 110
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=95.24 E-value=0.014 Score=53.78 Aligned_cols=72 Identities=10% Similarity=0.126 Sum_probs=47.9
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCc-------------------------------------eEEEEEcCCHHHHHHHH
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSA-------------------------------------QVVEAFDINDKANDVYE 53 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~-------------------------------------~~v~a~e~~~~a~~~y~ 53 (278)
..-+++|+|||.|++...+-..+.+. ..|+++|+|+.+++.-+
T Consensus 195 ~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~Ar 274 (385)
T 3ldu_A 195 AGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIAR 274 (385)
T ss_dssp TTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHHH
T ss_pred CCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHHH
Confidence 34689999999999876553332100 25899999999999999
Q ss_pred HHcCCCCc-------cccccccccccccCCCEEEeCCC
Q 023723 54 LNFGHRPY-------QAKRKPLSFRCQLLNNQLLRSPS 84 (278)
Q Consensus 54 ~N~~~~~~-------~~~~~~~~~~~~~~~Dll~~g~P 84 (278)
.|.....+ ..+..... ....+|+|+.-||
T Consensus 275 ~Na~~~gl~~~i~~~~~D~~~l~--~~~~~D~Iv~NPP 310 (385)
T 3ldu_A 275 ENAEIAGVDEYIEFNVGDATQFK--SEDEFGFIITNPP 310 (385)
T ss_dssp HHHHHHTCGGGEEEEECCGGGCC--CSCBSCEEEECCC
T ss_pred HHHHHcCCCCceEEEECChhhcC--cCCCCcEEEECCC
Confidence 98643222 12211111 1246999999999
No 111
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=95.18 E-value=0.035 Score=44.31 Aligned_cols=107 Identities=14% Similarity=0.055 Sum_probs=67.7
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCc-------cccccccccccccCCCEEEeCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-------QAKRKPLSFRCQLLNNQLLRSP 83 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~-------~~~~~~~~~~~~~~~Dll~~g~ 83 (278)
...+|+|+.||.|.+...+...+ ..|.++|+++.+++..+.|...... ..+... .......+|+++...
T Consensus 33 ~~~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~D~v~~~~ 108 (192)
T 1l3i_A 33 KNDVAVDVGCGTGGVTLELAGRV---RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE-ALCKIPDIDIAVVGG 108 (192)
T ss_dssp TTCEEEEESCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH-HHTTSCCEEEEEESC
T ss_pred CCCEEEEECCCCCHHHHHHHHhc---CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHH-hcccCCCCCEEEECC
Confidence 34699999999999999988877 4789999999999998887632211 111111 011124789999876
Q ss_pred CCCCCCcccccCCCCCCCCchHHHHhhhcCCc-EEEEEeCCCc-----cchhhccCc
Q 023723 84 SPLLGNDDMTVITKHDQPDDSWDKLLESCDPV-ERFLEFSNSG-----DQVNTETGF 134 (278)
Q Consensus 84 PCq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~-~~i~Ev~~~~-----~~~l~~~GY 134 (278)
+... ...++.++.+.++|. .+++...... .+.|++.||
T Consensus 109 ~~~~-------------~~~~l~~~~~~l~~gG~l~~~~~~~~~~~~~~~~l~~~g~ 152 (192)
T 1l3i_A 109 SGGE-------------LQEILRIIKDKLKPGGRIIVTAILLETKFEAMECLRDLGF 152 (192)
T ss_dssp CTTC-------------HHHHHHHHHHTEEEEEEEEEEECBHHHHHHHHHHHHHTTC
T ss_pred chHH-------------HHHHHHHHHHhcCCCcEEEEEecCcchHHHHHHHHHHCCC
Confidence 6421 123445566668885 4455521111 555666666
No 112
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=95.16 E-value=0.018 Score=53.22 Aligned_cols=72 Identities=10% Similarity=0.021 Sum_probs=47.5
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCc-------------------------------------eEEEEEcCCHHHHHHHHH
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSA-------------------------------------QVVEAFDINDKANDVYEL 54 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~-------------------------------------~~v~a~e~~~~a~~~y~~ 54 (278)
.-+++|.|||.|++..-+-..+.+. -.|.++|+++.+++.-+.
T Consensus 202 ~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~Ar~ 281 (393)
T 3k0b_A 202 DRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIAKQ 281 (393)
T ss_dssp TSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHH
T ss_pred CCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHHHH
Confidence 4689999999999875443322110 248999999999999999
Q ss_pred HcCCCCc-------cccccccccccccCCCEEEeCCCC
Q 023723 55 NFGHRPY-------QAKRKPLSFRCQLLNNQLLRSPSP 85 (278)
Q Consensus 55 N~~~~~~-------~~~~~~~~~~~~~~~Dll~~g~PC 85 (278)
|.....+ ..+..... ....+|+|+.-||-
T Consensus 282 Na~~~gl~~~I~~~~~D~~~~~--~~~~fD~Iv~NPPY 317 (393)
T 3k0b_A 282 NAVEAGLGDLITFRQLQVADFQ--TEDEYGVVVANPPY 317 (393)
T ss_dssp HHHHTTCTTCSEEEECCGGGCC--CCCCSCEEEECCCC
T ss_pred HHHHcCCCCceEEEECChHhCC--CCCCCCEEEECCCC
Confidence 8643222 12222111 12379999999994
No 113
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=95.14 E-value=0.041 Score=45.86 Aligned_cols=91 Identities=8% Similarity=-0.095 Sum_probs=57.4
Q ss_pred CCeEEeeecchhhHHHHHHhc-CCCceEEEEEcCCHHHHHHHHHHcCCCC----cccccccccc-c-cccCCCEEEeCCC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFGHRP----YQAKRKPLSF-R-CQLLNNQLLRSPS 84 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~a-G~~~~~v~a~e~~~~a~~~y~~N~~~~~----~~~~~~~~~~-~-~~~~~Dll~~g~P 84 (278)
.-+|||+.||.|.++..+... |- ...|.++|+++.+++..+.|..... +..+...... . ....+|+++..+|
T Consensus 74 ~~~vLDlG~G~G~~~~~la~~~~~-~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~~~ 152 (227)
T 1g8a_A 74 GKSVLYLGIASGTTASHVSDIVGW-EGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFEDVA 152 (227)
T ss_dssp TCEEEEETTTSTTHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEECCC
T ss_pred CCEEEEEeccCCHHHHHHHHHhCC-CeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEECCC
Confidence 458999999999999888754 32 1478999999998888777764331 1222221111 0 1236899997766
Q ss_pred CCCCCcccccCCCCCCCCchHHHHhhhcCCc
Q 023723 85 PLLGNDDMTVITKHDQPDDSWDKLLESCDPV 115 (278)
Q Consensus 85 Cq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~ 115 (278)
..+....++.++.+.++|.
T Consensus 153 ------------~~~~~~~~l~~~~~~Lkpg 171 (227)
T 1g8a_A 153 ------------QPTQAKILIDNAEVYLKRG 171 (227)
T ss_dssp ------------STTHHHHHHHHHHHHEEEE
T ss_pred ------------CHhHHHHHHHHHHHhcCCC
Confidence 1111122356677778885
No 114
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=95.13 E-value=0.045 Score=47.82 Aligned_cols=100 Identities=10% Similarity=0.023 Sum_probs=62.2
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCC--Cc-------cccccc---ccc---c-cccC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHR--PY-------QAKRKP---LSF---R-CQLL 75 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~--~~-------~~~~~~---~~~---~-~~~~ 75 (278)
.-+|||+.||.|++...+.+.+ ...|.++|+|+.+++.-+.|+ .. .+ .+.... -+. . ....
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~~--~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~~~~ 152 (281)
T 1mjf_A 76 PKRVLVIGGGDGGTVREVLQHD--VDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNNRG 152 (281)
T ss_dssp CCEEEEEECTTSHHHHHHTTSC--CSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHHCCC
T ss_pred CCeEEEEcCCcCHHHHHHHhCC--CCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcccCC
Confidence 4689999999999999887775 578999999999999999998 32 11 111000 010 0 0346
Q ss_pred CCEEEeCCCCCCCCcccccCCCCCCCCchHHHHhhhcCCc-EEEEE
Q 023723 76 NNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPV-ERFLE 120 (278)
Q Consensus 76 ~Dll~~g~PCq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~-~~i~E 120 (278)
+|+|+..+|+. +. ...+. -....+..+.+.++|. +++++
T Consensus 153 fD~Ii~d~~~~-~~---~~~~l--~~~~~l~~~~~~L~pgG~lv~~ 192 (281)
T 1mjf_A 153 FDVIIADSTDP-VG---PAKVL--FSEEFYRYVYDALNNPGIYVTQ 192 (281)
T ss_dssp EEEEEEECCCC-C--------T--TSHHHHHHHHHHEEEEEEEEEE
T ss_pred eeEEEECCCCC-CC---cchhh--hHHHHHHHHHHhcCCCcEEEEE
Confidence 89999988863 21 11111 0122344456668885 44444
No 115
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=95.09 E-value=0.062 Score=46.48 Aligned_cols=105 Identities=13% Similarity=0.129 Sum_probs=66.0
Q ss_pred CCeEEeeecchhhHHHHHHhc-CCCceEEEEEcCCHHHHHHHHHHcCCC----C---ccccccccccccccCCCEEEeCC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFGHR----P---YQAKRKPLSFRCQLLNNQLLRSP 83 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~a-G~~~~~v~a~e~~~~a~~~y~~N~~~~----~---~~~~~~~~~~~~~~~~Dll~~g~ 83 (278)
..+|||+.||.|++...+... +- ...|.++|+++.+++.-+.|.... . ...+... ......+|+++..+
T Consensus 111 ~~~VLD~G~G~G~~~~~la~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~--~~~~~~fD~Vi~~~ 187 (275)
T 1yb2_A 111 GMDILEVGVGSGNMSSYILYALNG-KGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD--FISDQMYDAVIADI 187 (275)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHTT-SSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT--CCCSCCEEEEEECC
T ss_pred cCEEEEecCCCCHHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhc--cCcCCCccEEEEcC
Confidence 468999999999999888776 21 247899999999999998887432 1 1122111 11224689999854
Q ss_pred CCCCCCcccccCCCCCCCCchHHHHhhhcCCc-EEEEEeCCC---c--cchhhccCc
Q 023723 84 SPLLGNDDMTVITKHDQPDDSWDKLLESCDPV-ERFLEFSNS---G--DQVNTETGF 134 (278)
Q Consensus 84 PCq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~-~~i~Ev~~~---~--~~~l~~~GY 134 (278)
| + ...++.++.+.++|. .+++..... . .+.|++.||
T Consensus 188 ~--------------~-~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~l~~~Gf 229 (275)
T 1yb2_A 188 P--------------D-PWNHVQKIASMMKPGSVATFYLPNFDQSEKTVLSLSASGM 229 (275)
T ss_dssp S--------------C-GGGSHHHHHHTEEEEEEEEEEESSHHHHHHHHHHSGGGTE
T ss_pred c--------------C-HHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCC
Confidence 4 1 124566677778885 333332221 1 455666666
No 116
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=95.03 E-value=0.046 Score=44.99 Aligned_cols=96 Identities=11% Similarity=0.025 Sum_probs=64.1
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCC----ccccccccccccccCCCEEEeCCCCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP----YQAKRKPLSFRCQLLNNQLLRSPSPL 86 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~----~~~~~~~~~~~~~~~~Dll~~g~PCq 86 (278)
...+|||+-||.|.+...+...| ..|.++|+++.+++.-+.|..... ...+..... ....+|++++...-.
T Consensus 51 ~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~--~~~~fD~v~~~~~l~ 125 (216)
T 3ofk_A 51 AVSNGLEIGCAAGAFTEKLAPHC---KRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFS--TAELFDLIVVAEVLY 125 (216)
T ss_dssp SEEEEEEECCTTSHHHHHHGGGE---EEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCC--CSCCEEEEEEESCGG
T ss_pred CCCcEEEEcCCCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCC--CCCCccEEEEccHHH
Confidence 45789999999999999998887 478899999999999999986542 122222222 235789999863321
Q ss_pred CCCcccccCCCCCC--CCchHHHHhhhcCCc-EEEEE
Q 023723 87 LGNDDMTVITKHDQ--PDDSWDKLLESCDPV-ERFLE 120 (278)
Q Consensus 87 ~fS~ag~~~g~~d~--r~~l~~~~i~~~~P~-~~i~E 120 (278)
. ..|. ...++.++.+.++|. .+++.
T Consensus 126 ~---------~~~~~~~~~~l~~~~~~L~pgG~l~~~ 153 (216)
T 3ofk_A 126 Y---------LEDMTQMRTAIDNMVKMLAPGGHLVFG 153 (216)
T ss_dssp G---------SSSHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred h---------CCCHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 1 2221 123455677778885 44444
No 117
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=95.01 E-value=0.033 Score=46.70 Aligned_cols=96 Identities=15% Similarity=0.018 Sum_probs=63.6
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCc-------cccccccccccccCCCEEEeCCC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-------QAKRKPLSFRCQLLNNQLLRSPS 84 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~-------~~~~~~~~~~~~~~~Dll~~g~P 84 (278)
..+|||+.||.|.+...+...| ..|.++|+++.+++.-+.+.+.... ..+..... ....+|+++....
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~~~~fD~v~~~~~ 141 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMASPE---RFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR--PTELFDLIFDYVF 141 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCBTT---EEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC--CSSCEEEEEEESS
T ss_pred CCCEEEeCCCCCHHHHHHHhCC---CeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC--CCCCeeEEEEChh
Confidence 3599999999999999997777 3589999999999999999876321 12222111 2236899997644
Q ss_pred CCCCCcccccCCCCCCCCchHHHHhhhcCCc--EEEEE
Q 023723 85 PLLGNDDMTVITKHDQPDDSWDKLLESCDPV--ERFLE 120 (278)
Q Consensus 85 Cq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~--~~i~E 120 (278)
...+. .+.+..++.++.+.++|. +++++
T Consensus 142 l~~~~--------~~~~~~~l~~~~~~LkpgG~l~~~~ 171 (235)
T 3lcc_A 142 FCAIE--------PEMRPAWAKSMYELLKPDGELITLM 171 (235)
T ss_dssp TTTSC--------GGGHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhcCC--------HHHHHHHHHHHHHHCCCCcEEEEEE
Confidence 33321 112234566677778884 34444
No 118
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=94.94 E-value=0.052 Score=45.24 Aligned_cols=73 Identities=14% Similarity=0.102 Sum_probs=53.2
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCC----ccccccccccccccCCCEEEeCCCCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP----YQAKRKPLSFRCQLLNNQLLRSPSPL 86 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~----~~~~~~~~~~~~~~~~Dll~~g~PCq 86 (278)
...+|||+.||.|.+...+...+ ..|.++|+++.+++.-+.|+.... ...+... .......+|+++...++.
T Consensus 70 ~~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~-~~~~~~~fD~v~~~~~~~ 145 (231)
T 1vbf_A 70 KGQKVLEIGTGIGYYTALIAEIV---DKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTL-GYEEEKPYDRVVVWATAP 145 (231)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGG-CCGGGCCEEEEEESSBBS
T ss_pred CCCEEEEEcCCCCHHHHHHHHHc---CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCccc-ccccCCCccEEEECCcHH
Confidence 34699999999999999998887 478999999999999999986532 1222111 111234689999887664
Q ss_pred C
Q 023723 87 L 87 (278)
Q Consensus 87 ~ 87 (278)
.
T Consensus 146 ~ 146 (231)
T 1vbf_A 146 T 146 (231)
T ss_dssp S
T ss_pred H
Confidence 3
No 119
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=94.94 E-value=0.035 Score=46.57 Aligned_cols=95 Identities=13% Similarity=0.030 Sum_probs=61.0
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCc-------ccccccc-ccc-cccCCCEEEeC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-------QAKRKPL-SFR-CQLLNNQLLRS 82 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~-------~~~~~~~-~~~-~~~~~Dll~~g 82 (278)
.-+|||+.||.|.++..+....- ...|.++|+++.+++.-+.|+..... ..+.... ... ....+|+++..
T Consensus 55 ~~~vLdiG~G~G~~~~~la~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 133 (233)
T 2gpy_A 55 PARILEIGTAIGYSAIRMAQALP-EATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFID 133 (233)
T ss_dssp CSEEEEECCTTSHHHHHHHHHCT-TCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEEE
T ss_pred CCEEEEecCCCcHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEEC
Confidence 45899999999999988877621 24789999999999998888642211 1221111 111 02468999987
Q ss_pred CCCCCCCcccccCCCCCCCCchHHHHhhhcCCc-EEEEE
Q 023723 83 PSPLLGNDDMTVITKHDQPDDSWDKLLESCDPV-ERFLE 120 (278)
Q Consensus 83 ~PCq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~-~~i~E 120 (278)
.||. ....++..+.+.++|. .+++.
T Consensus 134 ~~~~-------------~~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 134 AAKG-------------QYRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp GGGS-------------CHHHHHHHHGGGEEEEEEEEEE
T ss_pred CCHH-------------HHHHHHHHHHHHcCCCeEEEEE
Confidence 7753 1123445566678885 44555
No 120
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=94.92 E-value=0.022 Score=53.16 Aligned_cols=78 Identities=13% Similarity=0.057 Sum_probs=51.8
Q ss_pred CCCeEEeeecchhhHHHHHHhcC------------CCceEEEEEcCCHHHHHHHHHHcC---C----CC-cccccccccc
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKAD------------VSAQVVEAFDINDKANDVYELNFG---H----RP-YQAKRKPLSF 70 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG------------~~~~~v~a~e~~~~a~~~y~~N~~---~----~~-~~~~~~~~~~ 70 (278)
...+|+|.+||.|++.+.+.+.- +....++++|+++.+.+.-+.|.- . .. ...+......
T Consensus 171 ~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~~~ 250 (445)
T 2okc_A 171 MGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEKEP 250 (445)
T ss_dssp TTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTSCC
T ss_pred CCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCCcc
Confidence 34689999999999987765420 001368999999999998888742 1 11 2233222211
Q ss_pred ccccCCCEEEeCCCCCCCCc
Q 023723 71 RCQLLNNQLLRSPSPLLGND 90 (278)
Q Consensus 71 ~~~~~~Dll~~g~PCq~fS~ 90 (278)
...+|++++-||......
T Consensus 251 --~~~fD~Iv~NPPf~~~~~ 268 (445)
T 2okc_A 251 --STLVDVILANPPFGTRPA 268 (445)
T ss_dssp --SSCEEEEEECCCSSCCCT
T ss_pred --cCCcCEEEECCCCCCccc
Confidence 237999999999866443
No 121
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=94.92 E-value=0.058 Score=45.99 Aligned_cols=96 Identities=10% Similarity=-0.067 Sum_probs=60.9
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCc-------cccccc-cccc-cccCCCEEEeC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-------QAKRKP-LSFR-CQLLNNQLLRS 82 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~-------~~~~~~-~~~~-~~~~~Dll~~g 82 (278)
..+|||+.||.|..+..+..+--+...|.++|+++..++.-+.|+....+ ..+... +... ....+|+++..
T Consensus 64 ~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~~d 143 (248)
T 3tfw_A 64 AKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIFID 143 (248)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEEEC
T ss_pred CCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEEEC
Confidence 46999999999999998877610014789999999999998888743222 122111 1111 12379999986
Q ss_pred CCCCCCCcccccCCCCCCCCchHHHHhhhcCCc-EEEEE
Q 023723 83 PSPLLGNDDMTVITKHDQPDDSWDKLLESCDPV-ERFLE 120 (278)
Q Consensus 83 ~PCq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~-~~i~E 120 (278)
.++..+ ...+.++.+.++|. ++++.
T Consensus 144 ~~~~~~-------------~~~l~~~~~~LkpGG~lv~~ 169 (248)
T 3tfw_A 144 ADKPNN-------------PHYLRWALRYSRPGTLIIGD 169 (248)
T ss_dssp SCGGGH-------------HHHHHHHHHTCCTTCEEEEE
T ss_pred CchHHH-------------HHHHHHHHHhcCCCeEEEEe
Confidence 542211 12455567778995 55556
No 122
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=94.88 E-value=0.044 Score=46.34 Aligned_cols=95 Identities=9% Similarity=-0.004 Sum_probs=63.9
Q ss_pred CCCeEEeeecchhhHHHHHHhc--CCCceEEEEEcCCHHHHHHHHHHcCCCC-ccccccccccccccCCCEEEeCCCCCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKA--DVSAQVVEAFDINDKANDVYELNFGHRP-YQAKRKPLSFRCQLLNNQLLRSPSPLL 87 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~a--G~~~~~v~a~e~~~~a~~~y~~N~~~~~-~~~~~~~~~~~~~~~~Dll~~g~PCq~ 87 (278)
...+|||+-||.|.+...+... + ..+.++|+++..++..+.+.++.. ...+..... ....+|+++.....+.
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~~~~---~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~--~~~~fD~v~~~~~l~~ 107 (259)
T 2p35_A 33 RVLNGYDLGCGPGNSTELLTDRYGV---NVITGIDSDDDMLEKAADRLPNTNFGKADLATWK--PAQKADLLYANAVFQW 107 (259)
T ss_dssp CCSSEEEETCTTTHHHHHHHHHHCT---TSEEEEESCHHHHHHHHHHSTTSEEEECCTTTCC--CSSCEEEEEEESCGGG
T ss_pred CCCEEEEecCcCCHHHHHHHHhCCC---CEEEEEECCHHHHHHHHHhCCCcEEEECChhhcC--ccCCcCEEEEeCchhh
Confidence 3568999999999999888776 5 367899999999999998865443 223322222 2346899998654332
Q ss_pred CCcccccCCCCCCCCchHHHHhhhcCCc-EEEEE
Q 023723 88 GNDDMTVITKHDQPDDSWDKLLESCDPV-ERFLE 120 (278)
Q Consensus 88 fS~ag~~~g~~d~r~~l~~~~i~~~~P~-~~i~E 120 (278)
+ . ....++.++.+.++|. .+++.
T Consensus 108 ~---------~-~~~~~l~~~~~~L~pgG~l~~~ 131 (259)
T 2p35_A 108 V---------P-DHLAVLSQLMDQLESGGVLAVQ 131 (259)
T ss_dssp S---------T-THHHHHHHHGGGEEEEEEEEEE
T ss_pred C---------C-CHHHHHHHHHHhcCCCeEEEEE
Confidence 2 1 2234666677788995 34444
No 123
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=94.87 E-value=0.038 Score=47.79 Aligned_cols=96 Identities=14% Similarity=0.041 Sum_probs=63.9
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCc-------cccccccccccccCCCEEEeCCC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-------QAKRKPLSFRCQLLNNQLLRSPS 84 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~-------~~~~~~~~~~~~~~~Dll~~g~P 84 (278)
..+|||+-||.|.+...+...|. .|.++|+++.+++..+.+...... ..+...........+|+++....
T Consensus 69 ~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~ 145 (285)
T 4htf_A 69 KLRVLDAGGGEGQTAIKMAERGH---QVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAV 145 (285)
T ss_dssp CCEEEEETCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESC
T ss_pred CCEEEEeCCcchHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECch
Confidence 57999999999999999988883 688999999999999888754322 22222222122357999997643
Q ss_pred CCCCCcccccCCCCCCCCchHHHHhhhcCCc-EEEEE
Q 023723 85 PLLGNDDMTVITKHDQPDDSWDKLLESCDPV-ERFLE 120 (278)
Q Consensus 85 Cq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~-~~i~E 120 (278)
... ..|. ..++.++.+.++|. .+++.
T Consensus 146 l~~---------~~~~-~~~l~~~~~~LkpgG~l~~~ 172 (285)
T 4htf_A 146 LEW---------VADP-RSVLQTLWSVLRPGGVLSLM 172 (285)
T ss_dssp GGG---------CSCH-HHHHHHHHHTEEEEEEEEEE
T ss_pred hhc---------ccCH-HHHHHHHHHHcCCCeEEEEE
Confidence 322 1222 34566677788994 44444
No 124
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=94.77 E-value=0.073 Score=43.91 Aligned_cols=99 Identities=11% Similarity=0.002 Sum_probs=65.3
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCc-----------cccccccccccccCCCEE
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-----------QAKRKPLSFRCQLLNNQL 79 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~-----------~~~~~~~~~~~~~~~Dll 79 (278)
...+|||+.||.|.+...+...+- ...|.++|+++.+++..+.++....+ ..+... .......+|++
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~fD~V 106 (219)
T 3jwg_A 29 NAKKVIDLGCGEGNLLSLLLKDKS-FEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVY-RDKRFSGYDAA 106 (219)
T ss_dssp TCCEEEEETCTTCHHHHHHHTSTT-CCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSS-CCGGGTTCSEE
T ss_pred CCCEEEEecCCCCHHHHHHHhcCC-CCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccc-cccccCCCCEE
Confidence 346999999999999999988763 35889999999999999998764321 111111 11123479999
Q ss_pred EeCCCCCCCCcccccCCCCCC-CCchHHHHhhhcCCcEEEEE
Q 023723 80 LRSPSPLLGNDDMTVITKHDQ-PDDSWDKLLESCDPVERFLE 120 (278)
Q Consensus 80 ~~g~PCq~fS~ag~~~g~~d~-r~~l~~~~i~~~~P~~~i~E 120 (278)
+....-. ...++ ...++.++.+.++|.-+++.
T Consensus 107 ~~~~~l~---------~~~~~~~~~~l~~~~~~LkpgG~~i~ 139 (219)
T 3jwg_A 107 TVIEVIE---------HLDENRLQAFEKVLFEFTRPQTVIVS 139 (219)
T ss_dssp EEESCGG---------GCCHHHHHHHHHHHHTTTCCSEEEEE
T ss_pred EEHHHHH---------hCCHHHHHHHHHHHHHhhCCCEEEEE
Confidence 9643211 12221 13455567777999877766
No 125
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=94.73 E-value=0.033 Score=50.88 Aligned_cols=47 Identities=19% Similarity=0.243 Sum_probs=40.7
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHR 59 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~ 59 (278)
+.-+||++++|.|++..-+.+.+ ...|.++|+|+.+++.-+.|++..
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~--~~~Vt~VEID~~vie~Ar~~~~~l 234 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLK--PKMVTMVEIDQMVIDGCKKYMRKT 234 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTC--CSEEEEEESCHHHHHHHHHHCCC-
T ss_pred CCCEEEEEECChhHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHh
Confidence 46799999999999998887777 367899999999999999999853
No 126
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=94.69 E-value=0.092 Score=44.36 Aligned_cols=106 Identities=17% Similarity=0.061 Sum_probs=66.3
Q ss_pred CCCeEEeeecchhhHHHHHHhc-CCCceEEEEEcCCHHHHHHHHHHcCC----CC---ccccccccccccccCCCEEEeC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFGH----RP---YQAKRKPLSFRCQLLNNQLLRS 82 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~a-G~~~~~v~a~e~~~~a~~~y~~N~~~----~~---~~~~~~~~~~~~~~~~Dll~~g 82 (278)
..-+|||+.||.|.++..+.+. |- ...|.++|+++.+.+..+.|+.. .. ...+.... ......+|+++..
T Consensus 96 ~~~~vLdiG~G~G~~~~~l~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~-~~~~~~~D~v~~~ 173 (258)
T 2pwy_A 96 PGMRVLEAGTGSGGLTLFLARAVGE-KGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEA-ELEEAAYDGVALD 173 (258)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGC-CCCTTCEEEEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhc-CCCCCCcCEEEEC
Confidence 3458999999999999988876 41 24789999999999888887521 11 12221111 0122468999985
Q ss_pred CCCCCCCcccccCCCCCCCCchHHHHhhhcCCc--EEEEEeCCC-c----cchhhccCc
Q 023723 83 PSPLLGNDDMTVITKHDQPDDSWDKLLESCDPV--ERFLEFSNS-G----DQVNTETGF 134 (278)
Q Consensus 83 ~PCq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~--~~i~Ev~~~-~----~~~l~~~GY 134 (278)
+|.. ..++.++.+.++|. +++.+ ... . ++.|++.||
T Consensus 174 ~~~~---------------~~~l~~~~~~L~~gG~l~~~~-~~~~~~~~~~~~l~~~gf 216 (258)
T 2pwy_A 174 LMEP---------------WKVLEKAALALKPDRFLVAYL-PNITQVLELVRAAEAHPF 216 (258)
T ss_dssp SSCG---------------GGGHHHHHHHEEEEEEEEEEE-SCHHHHHHHHHHHTTTTE
T ss_pred CcCH---------------HHHHHHHHHhCCCCCEEEEEe-CCHHHHHHHHHHHHHCCC
Confidence 5421 24566677778884 33333 211 1 555666666
No 127
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=94.65 E-value=0.047 Score=52.54 Aligned_cols=74 Identities=18% Similarity=0.028 Sum_probs=48.5
Q ss_pred CeEEeeecchhhHHHHHHhc--------CC------CceEEEEEcCCHHHHHHHHHHcC-----CCC--ccccccccccc
Q 023723 13 WRVLEFYSGIGGMRYSLMKA--------DV------SAQVVEAFDINDKANDVYELNFG-----HRP--YQAKRKPLSFR 71 (278)
Q Consensus 13 ~~v~dLFsG~Gg~~~gl~~a--------G~------~~~~v~a~e~~~~a~~~y~~N~~-----~~~--~~~~~~~~~~~ 71 (278)
-+|+|.+||.|++-+.+.+. +. .-..++++|+++.+...-+.|.- ... ...+.+.....
T Consensus 246 ~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~~~~ 325 (544)
T 3khk_A 246 GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLDDQH 325 (544)
T ss_dssp EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTSCSC
T ss_pred CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccchhcCccc
Confidence 38999999999997765321 00 01478999999999999888751 111 22332222222
Q ss_pred cccCCCEEEeCCCCC
Q 023723 72 CQLLNNQLLRSPSPL 86 (278)
Q Consensus 72 ~~~~~Dll~~g~PCq 86 (278)
....+|+|++-||=.
T Consensus 326 ~~~~fD~Iv~NPPf~ 340 (544)
T 3khk_A 326 PDLRADFVMTNPPFN 340 (544)
T ss_dssp TTCCEEEEEECCCSS
T ss_pred ccccccEEEECCCcC
Confidence 235799999999953
No 128
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=94.62 E-value=0.028 Score=48.26 Aligned_cols=105 Identities=15% Similarity=0.071 Sum_probs=67.9
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCc-----cccccccccccccCCCEEEeCCCCC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-----QAKRKPLSFRCQLLNNQLLRSPSPL 86 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~-----~~~~~~~~~~~~~~~Dll~~g~PCq 86 (278)
.-+|+|+.||.|.++..+.+.| . .|.++|+++.+++.-+.|...... ..+.. +......+|++++.++..
T Consensus 121 ~~~VLDiGcG~G~l~~~la~~g--~-~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~--~~~~~~~fD~Vv~n~~~~ 195 (254)
T 2nxc_A 121 GDKVLDLGTGSGVLAIAAEKLG--G-KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLE--AALPFGPFDLLVANLYAE 195 (254)
T ss_dssp TCEEEEETCTTSHHHHHHHHTT--C-EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHH--HHGGGCCEEEEEEECCHH
T ss_pred CCEEEEecCCCcHHHHHHHHhC--C-eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChh--hcCcCCCCCEEEECCcHH
Confidence 4689999999999999999988 4 889999999999998888643221 11111 112234689999865421
Q ss_pred CCCcccccCCCCCCCCchHHHHhhhcCCc-EEEE-Ee-CCCc---cchhhccCc
Q 023723 87 LGNDDMTVITKHDQPDDSWDKLLESCDPV-ERFL-EF-SNSG---DQVNTETGF 134 (278)
Q Consensus 87 ~fS~ag~~~g~~d~r~~l~~~~i~~~~P~-~~i~-Ev-~~~~---~~~l~~~GY 134 (278)
. ...++.++.+.++|. .+++ ++ .... .+.+++.||
T Consensus 196 ~-------------~~~~l~~~~~~LkpgG~lils~~~~~~~~~v~~~l~~~Gf 236 (254)
T 2nxc_A 196 L-------------HAALAPRYREALVPGGRALLTGILKDRAPLVREAMAGAGF 236 (254)
T ss_dssp H-------------HHHHHHHHHHHEEEEEEEEEEEEEGGGHHHHHHHHHHTTC
T ss_pred H-------------HHHHHHHHHHHcCCCCEEEEEeeccCCHHHHHHHHHHCCC
Confidence 1 123455566678884 3333 32 2221 556666777
No 129
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=94.62 E-value=0.071 Score=44.53 Aligned_cols=96 Identities=11% Similarity=0.016 Sum_probs=63.0
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCc---cccccccccccccCCCEEEeCCCCCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY---QAKRKPLSFRCQLLNNQLLRSPSPLL 87 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~---~~~~~~~~~~~~~~~Dll~~g~PCq~ 87 (278)
...+|||+.||.|.+...+...| . .|.++|+++.+++..+.+.....+ ..+..... .....+|+++....-..
T Consensus 53 ~~~~vLDiG~G~G~~~~~l~~~~--~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~l~~ 128 (242)
T 3l8d_A 53 KEAEVLDVGCGDGYGTYKLSRTG--Y-KAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLP-FENEQFEAIMAINSLEW 128 (242)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTT--C-EEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCS-SCTTCEEEEEEESCTTS
T ss_pred CCCeEEEEcCCCCHHHHHHHHcC--C-eEEEEECCHHHHHHHHhhcccCCceEEEcchhcCC-CCCCCccEEEEcChHhh
Confidence 35699999999999999999988 3 678999999999999888533221 22222111 12357899987533221
Q ss_pred CCcccccCCCCCCCCchHHHHhhhcCCc-EEEEE
Q 023723 88 GNDDMTVITKHDQPDDSWDKLLESCDPV-ERFLE 120 (278)
Q Consensus 88 fS~ag~~~g~~d~r~~l~~~~i~~~~P~-~~i~E 120 (278)
..| ...++.++.+.++|. .+++.
T Consensus 129 ---------~~~-~~~~l~~~~~~L~pgG~l~i~ 152 (242)
T 3l8d_A 129 ---------TEE-PLRALNEIKRVLKSDGYACIA 152 (242)
T ss_dssp ---------SSC-HHHHHHHHHHHEEEEEEEEEE
T ss_pred ---------ccC-HHHHHHHHHHHhCCCeEEEEE
Confidence 222 224566677788994 34444
No 130
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=94.61 E-value=0.077 Score=43.45 Aligned_cols=94 Identities=12% Similarity=-0.065 Sum_probs=61.1
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCC-ccccccccccccccCCCEEEeCCCCCCCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP-YQAKRKPLSFRCQLLNNQLLRSPSPLLGN 89 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~-~~~~~~~~~~~~~~~~Dll~~g~PCq~fS 89 (278)
...+|||+.||.|.+...+ | +..+.++|+++.+++..+.+.++.. ...+..... .....+|+++....-..
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~l~~-- 107 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---P--YPQKVGVEPSEAMLAVGRRRAPEATWVRAWGEALP-FPGESFDVVLLFTTLEF-- 107 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---C--CSEEEEECCCHHHHHHHHHHCTTSEEECCCTTSCC-SCSSCEEEEEEESCTTT--
T ss_pred CCCeEEEECCCCCHhHHhC---C--CCeEEEEeCCHHHHHHHHHhCCCcEEEEcccccCC-CCCCcEEEEEEcChhhh--
Confidence 4579999999999988777 6 4478999999999999999984433 223322221 12246899997643222
Q ss_pred cccccCCCCCCCCchHHHHhhhcCCc-EEEEE
Q 023723 90 DDMTVITKHDQPDDSWDKLLESCDPV-ERFLE 120 (278)
Q Consensus 90 ~ag~~~g~~d~r~~l~~~~i~~~~P~-~~i~E 120 (278)
..| ...++.++.+.++|. .+++.
T Consensus 108 -------~~~-~~~~l~~~~~~L~pgG~l~i~ 131 (211)
T 2gs9_A 108 -------VED-VERVLLEARRVLRPGGALVVG 131 (211)
T ss_dssp -------CSC-HHHHHHHHHHHEEEEEEEEEE
T ss_pred -------cCC-HHHHHHHHHHHcCCCCEEEEE
Confidence 112 234566677778995 33444
No 131
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=94.61 E-value=0.068 Score=44.99 Aligned_cols=95 Identities=7% Similarity=0.007 Sum_probs=60.8
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCc-------ccccccccc-ccccCCCEEEeCC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-------QAKRKPLSF-RCQLLNNQLLRSP 83 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~-------~~~~~~~~~-~~~~~~Dll~~g~ 83 (278)
.-+|||+.||.|..+..+..++- ...|.++|+++.+++.-+.|+....+ ..+...... .....+|+++...
T Consensus 72 ~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~ 150 (232)
T 3ntv_A 72 VKNILEIGTAIGYSSMQFASISD-DIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFIDA 150 (232)
T ss_dssp CCEEEEECCSSSHHHHHHHTTCT-TCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEET
T ss_pred CCEEEEEeCchhHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEcC
Confidence 46899999999999999888432 35789999999999998888743222 222211111 1135799998654
Q ss_pred CCCCCCcccccCCCCCCCCchHHHHhhhcCCc-EEEEE
Q 023723 84 SPLLGNDDMTVITKHDQPDDSWDKLLESCDPV-ERFLE 120 (278)
Q Consensus 84 PCq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~-~~i~E 120 (278)
++.. ...++..+.+.++|. ++++.
T Consensus 151 ~~~~-------------~~~~l~~~~~~LkpgG~lv~d 175 (232)
T 3ntv_A 151 AKAQ-------------SKKFFEIYTPLLKHQGLVITD 175 (232)
T ss_dssp TSSS-------------HHHHHHHHGGGEEEEEEEEEE
T ss_pred cHHH-------------HHHHHHHHHHhcCCCeEEEEe
Confidence 3211 112444566778885 45555
No 132
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=94.59 E-value=0.03 Score=56.16 Aligned_cols=75 Identities=13% Similarity=0.009 Sum_probs=50.6
Q ss_pred CCCeEEeeecchhhHHHHHHhcC--CCceEEEEEcCCHHHHHHH--HHHcCCCC----------ccccccccccccccCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKAD--VSAQVVEAFDINDKANDVY--ELNFGHRP----------YQAKRKPLSFRCQLLN 76 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG--~~~~~v~a~e~~~~a~~~y--~~N~~~~~----------~~~~~~~~~~~~~~~~ 76 (278)
...+|+|.+||.|++-+.+.... ..-..++++|+++.+.+.- +.|.-... ..++...........+
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~kF 400 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFANV 400 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTTE
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCCC
Confidence 45799999999999988876542 1123578999999998887 66643211 1122222122234679
Q ss_pred CEEEeCCCC
Q 023723 77 NQLLRSPSP 85 (278)
Q Consensus 77 Dll~~g~PC 85 (278)
|++++-||=
T Consensus 401 DVVIgNPPY 409 (878)
T 3s1s_A 401 SVVVMNPPY 409 (878)
T ss_dssp EEEEECCBC
T ss_pred CEEEECCCc
Confidence 999999996
No 133
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=94.57 E-value=0.065 Score=51.49 Aligned_cols=80 Identities=6% Similarity=-0.104 Sum_probs=52.6
Q ss_pred CCCeEEeeecchhhHHHHHHhc----CC-------------CceEEEEEcCCHHHHHHHHHHcCC---C-------C-cc
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKA----DV-------------SAQVVEAFDINDKANDVYELNFGH---R-------P-YQ 62 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~a----G~-------------~~~~v~a~e~~~~a~~~y~~N~~~---~-------~-~~ 62 (278)
...+|+|.+||.|++-+.+.+. +- ....++++|+++.+.+.-+.|.-- . . ..
T Consensus 169 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~~ 248 (541)
T 2ar0_A 169 PREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIRL 248 (541)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEEE
T ss_pred CCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeEe
Confidence 3579999999999998766432 10 013689999999999998887421 1 1 12
Q ss_pred ccccccccccccCCCEEEeCCCCCCCCc
Q 023723 63 AKRKPLSFRCQLLNNQLLRSPSPLLGND 90 (278)
Q Consensus 63 ~~~~~~~~~~~~~~Dll~~g~PCq~fS~ 90 (278)
.+...........+|++++-||.-....
T Consensus 249 gDtL~~~~~~~~~fD~Vv~NPPf~~~~~ 276 (541)
T 2ar0_A 249 GNTLGSDGENLPKAHIVATNPPFGSAAG 276 (541)
T ss_dssp SCTTSHHHHTSCCEEEEEECCCCTTCSS
T ss_pred CCCcccccccccCCeEEEECCCcccccc
Confidence 2222212122357999999999876543
No 134
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=94.54 E-value=0.089 Score=43.80 Aligned_cols=99 Identities=13% Similarity=0.083 Sum_probs=66.1
Q ss_pred CCCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCC----ccccccccccccccCCCEEEeCCCC
Q 023723 10 GEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP----YQAKRKPLSFRCQLLNNQLLRSPSP 85 (278)
Q Consensus 10 ~~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~----~~~~~~~~~~~~~~~~Dll~~g~PC 85 (278)
....+|||+.||.|.+...+....- ...+.++|+++.+++..+.+++... ...+...... . ..+|+++.....
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~-~-~~fD~v~~~~~l 119 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKYP-EATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDF-E-EKYDMVVSALSI 119 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCCC-C-SCEEEEEEESCG
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccCC-C-CCceEEEEeCcc
Confidence 3458999999999999999888731 2478899999999999999986543 1222222111 1 578999987543
Q ss_pred CCCCcccccCCCCC-CCCchHHHHhhhcCCc--EEEEE
Q 023723 86 LLGNDDMTVITKHD-QPDDSWDKLLESCDPV--ERFLE 120 (278)
Q Consensus 86 q~fS~ag~~~g~~d-~r~~l~~~~i~~~~P~--~~i~E 120 (278)
..+ .+ .+..++.++.+.++|. +++.+
T Consensus 120 ~~~---------~~~~~~~~l~~~~~~LkpgG~l~~~~ 148 (234)
T 3dtn_A 120 HHL---------EDEDKKELYKRSYSILKESGIFINAD 148 (234)
T ss_dssp GGS---------CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccC---------CHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 322 11 1224666777889994 44555
No 135
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=94.51 E-value=0.069 Score=44.44 Aligned_cols=99 Identities=12% Similarity=0.077 Sum_probs=62.7
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCC-ccccccccccccccCCCEEEeCCCCCCCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP-YQAKRKPLSFRCQLLNNQLLRSPSPLLGN 89 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~-~~~~~~~~~~~~~~~~Dll~~g~PCq~fS 89 (278)
...+|||+.||.|.+...+...+ ..+.++|+++.+++..+.++++.. ...+...... ...+|++++..-+-
T Consensus 40 ~~~~vLdiG~G~G~~~~~l~~~~---~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~--~~~~D~v~~~~~~~--- 111 (239)
T 3bxo_A 40 EASSLLDVACGTGTHLEHFTKEF---GDTAGLELSEDMLTHARKRLPDATLHQGDMRDFRL--GRKFSAVVSMFSSV--- 111 (239)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHH---SEEEEEESCHHHHHHHHHHCTTCEEEECCTTTCCC--SSCEEEEEECTTGG---
T ss_pred CCCeEEEecccCCHHHHHHHHhC---CcEEEEeCCHHHHHHHHHhCCCCEEEECCHHHccc--CCCCcEEEEcCchH---
Confidence 45699999999999999998887 378899999999999999986544 2333222221 34689998532110
Q ss_pred cccccCCCCCCCCchHHHHhhhcCCc-EEEEE
Q 023723 90 DDMTVITKHDQPDDSWDKLLESCDPV-ERFLE 120 (278)
Q Consensus 90 ~ag~~~g~~d~r~~l~~~~i~~~~P~-~~i~E 120 (278)
..-... +....++.++.+.++|. .++++
T Consensus 112 --~~~~~~-~~~~~~l~~~~~~L~pgG~l~~~ 140 (239)
T 3bxo_A 112 --GYLKTT-EELGAAVASFAEHLEPGGVVVVE 140 (239)
T ss_dssp --GGCCSH-HHHHHHHHHHHHTEEEEEEEEEC
T ss_pred --hhcCCH-HHHHHHHHHHHHhcCCCeEEEEE
Confidence 110000 11223455566678885 44454
No 136
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=94.50 E-value=0.056 Score=45.34 Aligned_cols=96 Identities=7% Similarity=-0.101 Sum_probs=56.8
Q ss_pred CCeEEeeecchhhHHHHHHhc-CCCceEEEEEcCCHHHHHHHHHHc---CCCC-ccccccccc--cccccCCCEEEeCCC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNF---GHRP-YQAKRKPLS--FRCQLLNNQLLRSPS 84 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~a-G~~~~~v~a~e~~~~a~~~y~~N~---~~~~-~~~~~~~~~--~~~~~~~Dll~~g~P 84 (278)
.-+|||+.||.|.++..+.+. |- ...|.++|+++.+++....+. ++.. ...+..... ......+|+++..+|
T Consensus 78 ~~~vLDlG~G~G~~~~~la~~~g~-~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~D~V~~~~~ 156 (233)
T 2ipx_A 78 GAKVLYLGAASGTTVSHVSDIVGP-DGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFADVA 156 (233)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCT-TCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCEEEEEECCC
T ss_pred CCEEEEEcccCCHHHHHHHHHhCC-CcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcEEEEEEcCC
Confidence 458999999999999887665 21 247899999977544443332 2222 223322211 112346899998665
Q ss_pred CCCCCcccccCCCCCCCCchHHHHhhhcCCc-EEEEE
Q 023723 85 PLLGNDDMTVITKHDQPDDSWDKLLESCDPV-ERFLE 120 (278)
Q Consensus 85 Cq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~-~~i~E 120 (278)
.. +....++.++.+.++|. .++++
T Consensus 157 -----------~~-~~~~~~~~~~~~~LkpgG~l~i~ 181 (233)
T 2ipx_A 157 -----------QP-DQTRIVALNAHTFLRNGGHFVIS 181 (233)
T ss_dssp -----------CT-THHHHHHHHHHHHEEEEEEEEEE
T ss_pred -----------Cc-cHHHHHHHHHHHHcCCCeEEEEE
Confidence 01 11122355577788985 45556
No 137
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=94.48 E-value=0.057 Score=47.70 Aligned_cols=73 Identities=10% Similarity=0.070 Sum_probs=49.5
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCC--------C---ccccccccccccccCCCEEE
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHR--------P---YQAKRKPLSFRCQLLNNQLL 80 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~--------~---~~~~~~~~~~~~~~~~Dll~ 80 (278)
.-+|||+.||.|++...+.+.. +...|.++|+|+..++.-+.|++.. . +..|....-......+|+|+
T Consensus 84 ~~~VLdiG~G~G~~~~~l~~~~-~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi 162 (294)
T 3adn_A 84 AKHVLIIGGGDGAMLREVTRHK-NVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVII 162 (294)
T ss_dssp CCEEEEESCTTCHHHHHHHTCT-TCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEE
T ss_pred CCEEEEEeCChhHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEE
Confidence 5699999999999998887762 1478899999999999999987532 1 11221111111235799999
Q ss_pred eCCCC
Q 023723 81 RSPSP 85 (278)
Q Consensus 81 ~g~PC 85 (278)
..+|.
T Consensus 163 ~D~~~ 167 (294)
T 3adn_A 163 SDCTD 167 (294)
T ss_dssp ECC--
T ss_pred ECCCC
Confidence 97663
No 138
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=94.47 E-value=0.031 Score=53.81 Aligned_cols=77 Identities=12% Similarity=0.102 Sum_probs=51.6
Q ss_pred CCCCeEEeeecchhhHHHHHHhcC--CCceEEEEEcCCHHHHHHHHHHc---CCC-----Cccccccccc--cccccCCC
Q 023723 10 GEAWRVLEFYSGIGGMRYSLMKAD--VSAQVVEAFDINDKANDVYELNF---GHR-----PYQAKRKPLS--FRCQLLNN 77 (278)
Q Consensus 10 ~~~~~v~dLFsG~Gg~~~gl~~aG--~~~~~v~a~e~~~~a~~~y~~N~---~~~-----~~~~~~~~~~--~~~~~~~D 77 (278)
....+|+|.+||.|++-+.+.+.- ..-..++++|+++.+...-+.|. +.. ....+....+ ......+|
T Consensus 220 ~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~fD 299 (542)
T 3lkd_A 220 KQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFD 299 (542)
T ss_dssp CTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCBS
T ss_pred CCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceeccccccccccccc
Confidence 346799999999999877654430 00257899999999999988884 211 1123322221 12245799
Q ss_pred EEEeCCCCC
Q 023723 78 QLLRSPSPL 86 (278)
Q Consensus 78 ll~~g~PCq 86 (278)
+|++-||=.
T Consensus 300 ~IvaNPPf~ 308 (542)
T 3lkd_A 300 GVLMNPPYS 308 (542)
T ss_dssp EEEECCCTT
T ss_pred EEEecCCcC
Confidence 999999965
No 139
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=94.39 E-value=0.1 Score=46.53 Aligned_cols=45 Identities=33% Similarity=0.393 Sum_probs=37.9
Q ss_pred CCeEEeeecchhhHHHHHHhc-CCCceEEEEEcCCHHHHHHHHHHcC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFG 57 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~a-G~~~~~v~a~e~~~~a~~~y~~N~~ 57 (278)
.-+|||+.||.|.++..+..+ |- -..|.++|+++.+++..++|..
T Consensus 106 g~~VLDiG~G~G~~~~~la~~~g~-~~~v~~vD~~~~~~~~a~~~~~ 151 (336)
T 2b25_A 106 GDTVLEAGSGSGGMSLFLSKAVGS-QGRVISFEVRKDHHDLAKKNYK 151 (336)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCT-TCEEEEEESSHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcCHHHHHHHHHhCC-CceEEEEeCCHHHHHHHHHHHH
Confidence 468999999999999988776 52 2578999999999999888864
No 140
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=94.38 E-value=0.027 Score=49.62 Aligned_cols=69 Identities=9% Similarity=0.056 Sum_probs=49.4
Q ss_pred CeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCC----ccccc-cccccc--cccCCCEEEeCCC
Q 023723 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP----YQAKR-KPLSFR--CQLLNNQLLRSPS 84 (278)
Q Consensus 13 ~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~----~~~~~-~~~~~~--~~~~~Dll~~g~P 84 (278)
-.++|||+|.|.+..-+.+ + .+.+..+|.++.++++.+.|+.... +..|. ..+... ....+|+|..-||
T Consensus 93 ~~~LDlfaGSGaLgiEaLS-~--~d~~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDPP 168 (283)
T 2oo3_A 93 NSTLSYYPGSPYFAINQLR-S--QDRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLPPPEKRGLIFIDPS 168 (283)
T ss_dssp SSSCCEEECHHHHHHHHSC-T--TSEEEEECCSHHHHHHHTTSCCTTSCEEEECSCHHHHHHHHCSCTTSCEEEEECCC
T ss_pred CCceeEeCCcHHHHHHHcC-C--CCeEEEEeCCHHHHHHHHHHhCcCCcEEEEeCcHHHHHHHhcCCCCCccEEEECCC
Confidence 4589999999998877776 4 3788999999999999999996532 12221 101111 1235899999999
No 141
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=94.34 E-value=0.038 Score=48.53 Aligned_cols=44 Identities=16% Similarity=0.265 Sum_probs=37.4
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCce---EEEEEcCCHHHHHHHHHHc
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQ---VVEAFDINDKANDVYELNF 56 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~---~v~a~e~~~~a~~~y~~N~ 56 (278)
..-+|||+-||.|.++..+...+. + .|.++|+|+..++..+.|+
T Consensus 42 ~~~~VLEIG~G~G~lt~~La~~~~--~~~~~V~avDid~~~l~~a~~~~ 88 (279)
T 3uzu_A 42 RGERMVEIGPGLGALTGPVIARLA--TPGSPLHAVELDRDLIGRLEQRF 88 (279)
T ss_dssp TTCEEEEECCTTSTTHHHHHHHHC--BTTBCEEEEECCHHHHHHHHHHH
T ss_pred CcCEEEEEccccHHHHHHHHHhCC--CcCCeEEEEECCHHHHHHHHHhc
Confidence 346899999999999999988762 2 2899999999999999885
No 142
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=94.33 E-value=0.082 Score=47.19 Aligned_cols=97 Identities=10% Similarity=-0.054 Sum_probs=57.4
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCc-------cccccccccccccCCCEEEeCCC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-------QAKRKPLSFRCQLLNNQLLRSPS 84 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~-------~~~~~~~~~~~~~~~Dll~~g~P 84 (278)
.-+|||+.||.|.+++.+.++| ...|.++|+++ .++..++|.....+ ..+...+. .....+|+++..++
T Consensus 39 ~~~VLDiGcGtG~ls~~la~~g--~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~~D~Ivs~~~ 114 (328)
T 1g6q_1 39 DKIVLDVGCGTGILSMFAAKHG--AKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLEDVH-LPFPKVDIIISEWM 114 (328)
T ss_dssp TCEEEEETCTTSHHHHHHHHTC--CSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSC-CSSSCEEEEEECCC
T ss_pred CCEEEEecCccHHHHHHHHHCC--CCEEEEEChHH-HHHHHHHHHHHcCCCCCEEEEECchhhcc-CCCCcccEEEEeCc
Confidence 4589999999999999998888 46899999994 55555555432211 22222111 11246899998765
Q ss_pred CCCCCcccccCCCCCCCCchHHHHhhhcCCcEEEE
Q 023723 85 PLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFL 119 (278)
Q Consensus 85 Cq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~~~i~ 119 (278)
.... . .......++..+.+.++|.-+++
T Consensus 115 ~~~l------~-~~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 115 GYFL------L-YESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp BTTB------S-TTCCHHHHHHHHHHHEEEEEEEE
T ss_pred hhhc------c-cHHHHHHHHHHHHhhcCCCeEEE
Confidence 2111 0 11111234444556688865544
No 143
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=94.32 E-value=0.1 Score=47.00 Aligned_cols=96 Identities=13% Similarity=-0.036 Sum_probs=58.2
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCC-------ccccccccccccccCCCEEEeCCC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP-------YQAKRKPLSFRCQLLNNQLLRSPS 84 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~-------~~~~~~~~~~~~~~~~Dll~~g~P 84 (278)
.-+|||+.||.|.+++.+.++| ...|.++|+++ +++..+.|..... +..+...+. .....+|+|+..++
T Consensus 67 ~~~VLDvGcG~G~~~~~la~~g--~~~v~gvD~s~-~l~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~Iis~~~ 142 (349)
T 3q7e_A 67 DKVVLDVGSGTGILCMFAAKAG--ARKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEVE-LPVEKVDIIISEWM 142 (349)
T ss_dssp TCEEEEESCTTSHHHHHHHHTT--CSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCC-CSSSCEEEEEECCC
T ss_pred CCEEEEEeccchHHHHHHHHCC--CCEEEEECcHH-HHHHHHHHHHHcCCCCcEEEEECcHHHcc-CCCCceEEEEEccc
Confidence 4689999999999999999998 56889999995 5555555543221 122222221 12357999998653
Q ss_pred CCCCCcccccCCCCCCCCchHHHHhhhcCCcEEE
Q 023723 85 PLLGNDDMTVITKHDQPDDSWDKLLESCDPVERF 118 (278)
Q Consensus 85 Cq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~~~i 118 (278)
-.. ....+....++..+.+.++|.-++
T Consensus 143 ~~~-------l~~~~~~~~~l~~~~r~LkpgG~l 169 (349)
T 3q7e_A 143 GYC-------LFYESMLNTVLHARDKWLAPDGLI 169 (349)
T ss_dssp BBT-------BTBTCCHHHHHHHHHHHEEEEEEE
T ss_pred ccc-------ccCchhHHHHHHHHHHhCCCCCEE
Confidence 111 101112223445556778886444
No 144
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=94.31 E-value=0.12 Score=44.47 Aligned_cols=95 Identities=11% Similarity=0.112 Sum_probs=64.4
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCc-cccccccccccccCCCEEEeCCCCCCCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-QAKRKPLSFRCQLLNNQLLRSPSPLLGN 89 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~-~~~~~~~~~~~~~~~Dll~~g~PCq~fS 89 (278)
...+|||+-||.|.+...+...| ..|.++|+++..++..+.++++..+ ..+...+.. ...+|+++....-+.+
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~--~~~fD~v~~~~~l~~~- 130 (279)
T 3ccf_A 57 PGEFILDLGCGTGQLTEKIAQSG---AEVLGTDNAATMIEKARQNYPHLHFDVADARNFRV--DKPLDAVFSNAMLHWV- 130 (279)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHCTTSCEEECCTTTCCC--SSCEEEEEEESCGGGC-
T ss_pred CCCEEEEecCCCCHHHHHHHhCC---CeEEEEECCHHHHHHHHhhCCCCEEEECChhhCCc--CCCcCEEEEcchhhhC-
Confidence 34699999999999999888866 4788999999999999988754432 233222221 2468999976432221
Q ss_pred cccccCCCCCCCCchHHHHhhhcCCc-EEEEE
Q 023723 90 DDMTVITKHDQPDDSWDKLLESCDPV-ERFLE 120 (278)
Q Consensus 90 ~ag~~~g~~d~r~~l~~~~i~~~~P~-~~i~E 120 (278)
.| ...++.++.+.++|. .++++
T Consensus 131 --------~d-~~~~l~~~~~~LkpgG~l~~~ 153 (279)
T 3ccf_A 131 --------KE-PEAAIASIHQALKSGGRFVAE 153 (279)
T ss_dssp --------SC-HHHHHHHHHHHEEEEEEEEEE
T ss_pred --------cC-HHHHHHHHHHhcCCCcEEEEE
Confidence 12 224666677888995 44455
No 145
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=94.30 E-value=0.081 Score=43.17 Aligned_cols=89 Identities=12% Similarity=0.182 Sum_probs=59.3
Q ss_pred eEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCc-------cccccccccccccCCCEEEeCCCCC
Q 023723 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-------QAKRKPLSFRCQLLNNQLLRSPSPL 86 (278)
Q Consensus 14 ~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~-------~~~~~~~~~~~~~~~Dll~~g~PCq 86 (278)
+|||+.||.|.+...+.... ...+.++|+++.+++..+.|...... ..+..... .....+|+++......
T Consensus 46 ~vLdiG~G~G~~~~~l~~~~--~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~D~v~~~~~l~ 122 (219)
T 3dlc_A 46 TCIDIGSGPGALSIALAKQS--DFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIP-IEDNYADLIVSRGSVF 122 (219)
T ss_dssp EEEEETCTTSHHHHHHHHHS--EEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCS-SCTTCEEEEEEESCGG
T ss_pred EEEEECCCCCHHHHHHHHcC--CCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCC-CCcccccEEEECchHh
Confidence 99999999999999888762 25789999999999988888543221 12211111 1234689999875433
Q ss_pred CCCcccccCCCCCCCCchHHHHhhhcCCc
Q 023723 87 LGNDDMTVITKHDQPDDSWDKLLESCDPV 115 (278)
Q Consensus 87 ~fS~ag~~~g~~d~r~~l~~~~i~~~~P~ 115 (278)
.+ +....++.++.+.++|.
T Consensus 123 ~~----------~~~~~~l~~~~~~L~pg 141 (219)
T 3dlc_A 123 FW----------EDVATAFREIYRILKSG 141 (219)
T ss_dssp GC----------SCHHHHHHHHHHHEEEE
T ss_pred hc----------cCHHHHHHHHHHhCCCC
Confidence 22 12234666677778994
No 146
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=94.29 E-value=0.075 Score=48.45 Aligned_cols=96 Identities=15% Similarity=0.013 Sum_probs=58.3
Q ss_pred CCCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCc-------cccccccccccccCCCEEEeC
Q 023723 10 GEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-------QAKRKPLSFRCQLLNNQLLRS 82 (278)
Q Consensus 10 ~~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~-------~~~~~~~~~~~~~~~Dll~~g 82 (278)
.+.-+|||+.||.|.+++.+.++| ...|.++|++ .+++..+.|.....+ ..+...+.. ...+|+++..
T Consensus 62 ~~~~~VLDlGcGtG~ls~~la~~g--~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~~~~D~Iv~~ 136 (376)
T 3r0q_C 62 FEGKTVLDVGTGSGILAIWSAQAG--ARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISL--PEKVDVIISE 136 (376)
T ss_dssp TTTCEEEEESCTTTHHHHHHHHTT--CSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCC--SSCEEEEEEC
T ss_pred CCCCEEEEeccCcCHHHHHHHhcC--CCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCc--CCcceEEEEc
Confidence 345789999999999999999998 4689999999 666666665532221 222222211 1579999985
Q ss_pred CCCCCCCcccccCCCCCCCCchHHHHhhhcCCcEE
Q 023723 83 PSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVER 117 (278)
Q Consensus 83 ~PCq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~~~ 117 (278)
+...-.. ..+....++..+.+.++|.-+
T Consensus 137 ~~~~~l~-------~e~~~~~~l~~~~~~LkpgG~ 164 (376)
T 3r0q_C 137 WMGYFLL-------RESMFDSVISARDRWLKPTGV 164 (376)
T ss_dssp CCBTTBT-------TTCTHHHHHHHHHHHEEEEEE
T ss_pred Chhhccc-------chHHHHHHHHHHHhhCCCCeE
Confidence 4321110 111222344445566888543
No 147
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=94.29 E-value=0.074 Score=44.66 Aligned_cols=101 Identities=11% Similarity=-0.080 Sum_probs=62.5
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCC-----cccccccc-ccccccCCCEEEe-CC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP-----YQAKRKPL-SFRCQLLNNQLLR-SP 83 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~-----~~~~~~~~-~~~~~~~~Dll~~-g~ 83 (278)
...+|||+.||.|.+...+...+ ...|.++|+++.+++.-+.+..... +..+.... .......+|+++. .+
T Consensus 60 ~~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~ 137 (236)
T 1zx0_A 60 KGGRVLEVGFGMAIAASKVQEAP--IDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTY 137 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHHTSC--EEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCC
T ss_pred CCCeEEEEeccCCHHHHHHHhcC--CCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECCc
Confidence 45799999999999999997777 5688999999999999998874322 11221111 1122246999997 44
Q ss_pred CCCCCCcccccCCCCCCCCchHHHHhhhcCCcEEEE
Q 023723 84 SPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFL 119 (278)
Q Consensus 84 PCq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~~~i~ 119 (278)
+. ... ... . ..+..++.++.+.++|.-.++
T Consensus 138 ~~-~~~--~~~--~-~~~~~~l~~~~r~LkpgG~l~ 167 (236)
T 1zx0_A 138 PL-SEE--TWH--T-HQFNFIKNHAFRLLKPGGVLT 167 (236)
T ss_dssp CC-BGG--GTT--T-HHHHHHHHTHHHHEEEEEEEE
T ss_pred cc-chh--hhh--h-hhHHHHHHHHHHhcCCCeEEE
Confidence 32 111 000 0 011234556777799964433
No 148
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=94.26 E-value=0.053 Score=44.97 Aligned_cols=96 Identities=10% Similarity=0.031 Sum_probs=59.5
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCc-------cccccc-cccccc----cCCCEE
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-------QAKRKP-LSFRCQ----LLNNQL 79 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~-------~~~~~~-~~~~~~----~~~Dll 79 (278)
.-+|||+.||.|..+..+..+--+...|.++|+++.+++.-+.|+....+ ..+... +..... ..+|++
T Consensus 65 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~v 144 (225)
T 3tr6_A 65 AKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDLI 144 (225)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEEE
T ss_pred CCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCccEE
Confidence 45899999999999998877610024789999999999998888743222 122111 111111 579999
Q ss_pred EeCCCCCCCCcccccCCCCCCCCchHHHHhhhcCCc-EEEEE
Q 023723 80 LRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPV-ERFLE 120 (278)
Q Consensus 80 ~~g~PCq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~-~~i~E 120 (278)
+..++. ......+..+.+.++|. ++++.
T Consensus 145 ~~~~~~-------------~~~~~~l~~~~~~L~pgG~lv~~ 173 (225)
T 3tr6_A 145 YIDADK-------------ANTDLYYEESLKLLREGGLIAVD 173 (225)
T ss_dssp EECSCG-------------GGHHHHHHHHHHHEEEEEEEEEE
T ss_pred EECCCH-------------HHHHHHHHHHHHhcCCCcEEEEe
Confidence 965541 01112445566778885 44555
No 149
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=94.24 E-value=0.099 Score=45.20 Aligned_cols=98 Identities=9% Similarity=0.021 Sum_probs=63.0
Q ss_pred CCeEEeeecchhhHHHHHHhcCC-CceEEEEEcCCHHHHHHHHHHcCCCCc-------cccccccccccccCCCEEEeCC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADV-SAQVVEAFDINDKANDVYELNFGHRPY-------QAKRKPLSFRCQLLNNQLLRSP 83 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~-~~~~v~a~e~~~~a~~~y~~N~~~~~~-------~~~~~~~~~~~~~~~Dll~~g~ 83 (278)
.-+||||-||.|.+...+.+..- +--.|.++|+++..++.-+.+...... ..+.. ..+.+++|+++...
T Consensus 71 ~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~---~~~~~~~d~v~~~~ 147 (261)
T 4gek_A 71 GTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIR---DIAIENASMVVLNF 147 (261)
T ss_dssp TCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTT---TCCCCSEEEEEEES
T ss_pred CCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccc---cccccccccceeee
Confidence 46899999999999988866421 112578999999999888887543221 12222 22345688888654
Q ss_pred CCCCCCcccccCCCCCCCCchHHHHhhhcCC--cEEEEE
Q 023723 84 SPLLGNDDMTVITKHDQPDDSWDKLLESCDP--VERFLE 120 (278)
Q Consensus 84 PCq~fS~ag~~~g~~d~r~~l~~~~i~~~~P--~~~i~E 120 (278)
-.+-++ .+.|..++.++.+.++| .+++.|
T Consensus 148 ~l~~~~--------~~~~~~~l~~i~~~LkpGG~lii~e 178 (261)
T 4gek_A 148 TLQFLE--------PSERQALLDKIYQGLNPGGALVLSE 178 (261)
T ss_dssp CGGGSC--------HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eeeecC--------chhHhHHHHHHHHHcCCCcEEEEEe
Confidence 222111 12344577788888999 466677
No 150
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=94.24 E-value=0.068 Score=47.76 Aligned_cols=102 Identities=16% Similarity=0.156 Sum_probs=62.5
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCC--c--------cccccccccccccCCCEEEe
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP--Y--------QAKRKPLSFRCQLLNNQLLR 81 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~--~--------~~~~~~~~~~~~~~~Dll~~ 81 (278)
.-+|+|+.||.|++...+.+.. +...|.++|+++.+++.-+.|++... . ..|....-......+|+|+.
T Consensus 117 ~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~ 195 (321)
T 2pt6_A 117 PKNVLVVGGGDGGIIRELCKYK-SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 195 (321)
T ss_dssp CCEEEEEECTTCHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred CCEEEEEcCCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEEE
Confidence 4689999999999998887662 14688999999999999999987621 1 11111100011246999998
Q ss_pred CCCCCCCCcccccCCCCCCCCchHHHHhhhcCCc-EEEEE
Q 023723 82 SPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPV-ERFLE 120 (278)
Q Consensus 82 g~PCq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~-~~i~E 120 (278)
.++.. + +..... -....+..+.+.++|. +++++
T Consensus 196 d~~~p-~---~~~~~l--~~~~~l~~~~~~LkpgG~lv~~ 229 (321)
T 2pt6_A 196 DSSDP-I---GPAETL--FNQNFYEKIYNALKPNGYCVAQ 229 (321)
T ss_dssp ECCCS-S---SGGGGG--SSHHHHHHHHHHEEEEEEEEEE
T ss_pred CCcCC-C---Ccchhh--hHHHHHHHHHHhcCCCcEEEEE
Confidence 76532 2 111101 0122334455568885 55565
No 151
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=94.20 E-value=0.05 Score=47.43 Aligned_cols=44 Identities=25% Similarity=0.182 Sum_probs=38.9
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcC-CHHHHHHHHHHc
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDI-NDKANDVYELNF 56 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~-~~~a~~~y~~N~ 56 (278)
..-+||||.||.|.+++.+...| ...|.++|+ ++.+++..+.|.
T Consensus 79 ~~~~vLDlG~G~G~~~~~~a~~~--~~~v~~~D~s~~~~~~~a~~n~ 123 (281)
T 3bzb_A 79 AGKTVCELGAGAGLVSIVAFLAG--ADQVVATDYPDPEILNSLESNI 123 (281)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTT--CSEEEEEECSCHHHHHHHHHHH
T ss_pred CCCeEEEecccccHHHHHHHHcC--CCEEEEEeCCCHHHHHHHHHHH
Confidence 34589999999999999998888 458899999 899999999887
No 152
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=94.12 E-value=0.092 Score=43.59 Aligned_cols=74 Identities=12% Similarity=0.055 Sum_probs=50.2
Q ss_pred CCCeEEeeecchhhHHHHHHhc-CCCceEEEEEcCCHHHHHHHHHHcCCC--------C---ccccccccccccccCCCE
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFGHR--------P---YQAKRKPLSFRCQLLNNQ 78 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~a-G~~~~~v~a~e~~~~a~~~y~~N~~~~--------~---~~~~~~~~~~~~~~~~Dl 78 (278)
...+|||+.||.|.++..+... |- ...|.++|+++.+++.-+.|.... . ...+... .......+|+
T Consensus 77 ~~~~vLDiG~G~G~~~~~la~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~fD~ 154 (226)
T 1i1n_A 77 EGAKALDVGSGSGILTACFARMVGC-TGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRM-GYAEEAPYDA 154 (226)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGG-CCGGGCCEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHHhCC-CcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCccc-CcccCCCcCE
Confidence 3569999999999999877654 42 237899999999988888775421 1 1112111 1112346899
Q ss_pred EEeCCCCC
Q 023723 79 LLRSPSPL 86 (278)
Q Consensus 79 l~~g~PCq 86 (278)
++...+|.
T Consensus 155 i~~~~~~~ 162 (226)
T 1i1n_A 155 IHVGAAAP 162 (226)
T ss_dssp EEECSBBS
T ss_pred EEECCchH
Confidence 99998883
No 153
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=94.09 E-value=0.12 Score=43.97 Aligned_cols=97 Identities=16% Similarity=0.056 Sum_probs=64.3
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCccccccccccccccCCCEEEeCCCCCCCCc
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQAKRKPLSFRCQLLNNQLLRSPSPLLGND 90 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~~~~~~~~~~~~~~~~Dll~~g~PCq~fS~ 90 (278)
...+|||+-||.|.+...+...| . .|.++|+++.+++.-+.+........+..... .....+|+++.......+.
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~--~-~v~gvD~s~~~l~~a~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~~~~~~- 128 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQERG--F-EVVLVDPSKEMLEVAREKGVKNVVEAKAEDLP-FPSGAFEAVLALGDVLSYV- 128 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTTT--C-EEEEEESCHHHHHHHHHHTCSCEEECCTTSCC-SCTTCEEEEEECSSHHHHC-
T ss_pred CCCeEEEeCCCcCHHHHHHHHcC--C-eEEEEeCCHHHHHHHHhhcCCCEEECcHHHCC-CCCCCEEEEEEcchhhhcc-
Confidence 45699999999999999998888 3 68899999999999998876322222222221 1234689988654322211
Q ss_pred ccccCCCCCCCCchHHHHhhhcCCc-EEEEE
Q 023723 91 DMTVITKHDQPDDSWDKLLESCDPV-ERFLE 120 (278)
Q Consensus 91 ag~~~g~~d~r~~l~~~~i~~~~P~-~~i~E 120 (278)
.+ ...++.++.+.++|. .+++.
T Consensus 129 -------~~-~~~~l~~~~~~LkpgG~l~~~ 151 (260)
T 2avn_A 129 -------EN-KDKAFSEIRRVLVPDGLLIAT 151 (260)
T ss_dssp -------SC-HHHHHHHHHHHEEEEEEEEEE
T ss_pred -------cc-HHHHHHHHHHHcCCCeEEEEE
Confidence 12 344566677778995 44455
No 154
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=94.08 E-value=0.073 Score=44.25 Aligned_cols=96 Identities=9% Similarity=-0.025 Sum_probs=59.7
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCc-------cccccc-cccccc----cCCCEE
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-------QAKRKP-LSFRCQ----LLNNQL 79 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~-------~~~~~~-~~~~~~----~~~Dll 79 (278)
.-+|||+.||.|..+..+..+.-+...|.++|+++.+.+.-+.|+..... ..+... +..... ..+|++
T Consensus 70 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~v 149 (229)
T 2avd_A 70 AKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFDVA 149 (229)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEEEE
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCccEE
Confidence 45899999999999998877521124789999999999988888642211 122111 111111 468999
Q ss_pred EeCCCCCCCCcccccCCCCCCCCchHHHHhhhcCCc-EEEEE
Q 023723 80 LRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPV-ERFLE 120 (278)
Q Consensus 80 ~~g~PCq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~-~~i~E 120 (278)
+..+|. ......+..+.+.++|. ++++.
T Consensus 150 ~~d~~~-------------~~~~~~l~~~~~~L~pgG~lv~~ 178 (229)
T 2avd_A 150 VVDADK-------------ENCSAYYERCLQLLRPGGILAVL 178 (229)
T ss_dssp EECSCS-------------TTHHHHHHHHHHHEEEEEEEEEE
T ss_pred EECCCH-------------HHHHHHHHHHHHHcCCCeEEEEE
Confidence 986551 11123455566778885 44454
No 155
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=94.03 E-value=0.12 Score=43.32 Aligned_cols=107 Identities=7% Similarity=-0.135 Sum_probs=63.6
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCC------cccccccc-c-cccccCCCEEEeC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP------YQAKRKPL-S-FRCQLLNNQLLRS 82 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~------~~~~~~~~-~-~~~~~~~Dll~~g 82 (278)
..-+|||+.||.|.+...+....- -..|.++|+++.++..-+.|..... +..+...+ . ......+|.++..
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p-~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~ 112 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRP-EQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLF 112 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCT-TSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCC-CCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEe
Confidence 456899999999999988876642 2468999999998888777742211 12222211 1 1233568999988
Q ss_pred CCCCCCCcccccCCCCCCCCchHHHHhhhcCCc-EEEEE
Q 023723 83 PSPLLGNDDMTVITKHDQPDDSWDKLLESCDPV-ERFLE 120 (278)
Q Consensus 83 ~PCq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~-~~i~E 120 (278)
+|..-.......+... ...++.++.+.++|. .+++.
T Consensus 113 ~~~p~~~~~~~~rr~~--~~~~l~~~~r~LkpGG~l~i~ 149 (218)
T 3dxy_A 113 FPDPWHKARHNKRRIV--QVPFAELVKSKLQLGGVFHMA 149 (218)
T ss_dssp SCCCCCSGGGGGGSSC--SHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCccchhhhhhhhh--hHHHHHHHHHHcCCCcEEEEE
Confidence 7765332211111111 113455566778995 34444
No 156
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=93.95 E-value=0.075 Score=45.82 Aligned_cols=102 Identities=12% Similarity=-0.009 Sum_probs=63.2
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCc-------cccccccccccccCCCEEEeCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-------QAKRKPLSFRCQLLNNQLLRSP 83 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~-------~~~~~~~~~~~~~~~Dll~~g~ 83 (278)
...+|||+.||.|.+...+...| ...|.++|+++.+++.-+.+++.... ..+...........+|+++...
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~ 141 (298)
T 1ri5_A 64 RGDSVLDLGCGKGGDLLKYERAG--IGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQF 141 (298)
T ss_dssp TTCEEEEETCTTTTTHHHHHHHT--CSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEES
T ss_pred CCCeEEEECCCCCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECc
Confidence 45699999999999998888887 45889999999999999888765421 1221111111234689998764
Q ss_pred CCCCCCcccccCCCCCCCCchHHHHhhhcCCc-EEEEE
Q 023723 84 SPLLGNDDMTVITKHDQPDDSWDKLLESCDPV-ERFLE 120 (278)
Q Consensus 84 PCq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~-~~i~E 120 (278)
.-... .... +....++.++.+.++|. .+++.
T Consensus 142 ~l~~~-----~~~~-~~~~~~l~~~~~~LkpgG~l~~~ 173 (298)
T 1ri5_A 142 SFHYA-----FSTS-ESLDIAQRNIARHLRPGGYFIMT 173 (298)
T ss_dssp CGGGG-----GSSH-HHHHHHHHHHHHTEEEEEEEEEE
T ss_pred hhhhh-----cCCH-HHHHHHHHHHHHhcCCCCEEEEE
Confidence 31110 0001 11223555566778885 44455
No 157
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=93.95 E-value=0.04 Score=47.79 Aligned_cols=72 Identities=14% Similarity=0.009 Sum_probs=48.9
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCH-------HHHHHHHHHcC-----C-CC-cccccccc-ccccc--c
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDIND-------KANDVYELNFG-----H-RP-YQAKRKPL-SFRCQ--L 74 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~-------~a~~~y~~N~~-----~-~~-~~~~~~~~-~~~~~--~ 74 (278)
.-+|||++||.|.+++-+...| ..|.++|+++ .+++..+.|.. + .. +..+.... ..... .
T Consensus 84 ~~~VLDlgcG~G~~a~~lA~~g---~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~~~ 160 (258)
T 2r6z_A 84 HPTVWDATAGLGRDSFVLASLG---LTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKTQG 160 (258)
T ss_dssp CCCEEETTCTTCHHHHHHHHTT---CCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHHHC
T ss_pred cCeEEEeeCccCHHHHHHHHhC---CEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhccCC
Confidence 3589999999999999888877 3578999999 99888877642 1 11 22222111 11111 4
Q ss_pred CCCEEEeCCCCC
Q 023723 75 LNNQLLRSPSPL 86 (278)
Q Consensus 75 ~~Dll~~g~PCq 86 (278)
.+|+++..||=.
T Consensus 161 ~fD~V~~dP~~~ 172 (258)
T 2r6z_A 161 KPDIVYLDPMYP 172 (258)
T ss_dssp CCSEEEECCCC-
T ss_pred CccEEEECCCCC
Confidence 699999988743
No 158
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=93.94 E-value=0.084 Score=48.40 Aligned_cols=65 Identities=18% Similarity=0.166 Sum_probs=43.7
Q ss_pred CeEEeeecchhhHHHHHHhcCCCceEEEEEcCCH---HHHHHHHHHcC-CCC--ccccccccccccccCCCEEEe
Q 023723 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDIND---KANDVYELNFG-HRP--YQAKRKPLSFRCQLLNNQLLR 81 (278)
Q Consensus 13 ~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~---~a~~~y~~N~~-~~~--~~~~~~~~~~~~~~~~Dll~~ 81 (278)
=+|||+-||.|.+++-+.++| .+.|+|+|.++ .|.+..+.|.- +.. +..+...++. ..++|+|+.
T Consensus 85 k~VLDvG~GtGiLs~~Aa~aG--A~~V~ave~s~~~~~a~~~~~~n~~~~~i~~i~~~~~~~~l--pe~~Dvivs 155 (376)
T 4hc4_A 85 KTVLDVGAGTGILSIFCAQAG--ARRVYAVEASAIWQQAREVVRFNGLEDRVHVLPGPVETVEL--PEQVDAIVS 155 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHTT--CSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTCCC--SSCEEEEEC
T ss_pred CEEEEeCCCccHHHHHHHHhC--CCEEEEEeChHHHHHHHHHHHHcCCCceEEEEeeeeeeecC--CccccEEEe
Confidence 379999999999999888999 58999999985 34455555532 221 2222222221 247999985
No 159
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=93.87 E-value=0.02 Score=52.46 Aligned_cols=72 Identities=19% Similarity=0.059 Sum_probs=48.7
Q ss_pred CCeEEeeecchhhHHHHHHhc-CCCceEEEEEcCCHHHHHHHHHHcCCCC-ccccccccccccccCCCEEEeCCCCCCCC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFGHRP-YQAKRKPLSFRCQLLNNQLLRSPSPLLGN 89 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~a-G~~~~~v~a~e~~~~a~~~y~~N~~~~~-~~~~~~~~~~~~~~~~Dll~~g~PCq~fS 89 (278)
.-+|+|+.||.|++.+.+.+. +. ...+.++|+++.+++.- .... ...+..... ....+|++++-||.-..+
T Consensus 40 ~~~vLD~gcGtG~~~~~~~~~~~~-~~~i~gvDi~~~~~~~a----~~~~~~~~D~~~~~--~~~~fD~Ii~NPPy~~~~ 112 (421)
T 2ih2_A 40 GGRVLEPACAHGPFLRAFREAHGT-AYRFVGVEIDPKALDLP----PWAEGILADFLLWE--PGEAFDLILGNPPYGIVG 112 (421)
T ss_dssp TCEEEEETCTTCHHHHHHHHHHCS-CSEEEEEESCTTTCCCC----TTEEEEESCGGGCC--CSSCEEEEEECCCCCCBS
T ss_pred CCEEEECCCCChHHHHHHHHHhCC-CCeEEEEECCHHHHHhC----CCCcEEeCChhhcC--ccCCCCEEEECcCccCcc
Confidence 449999999999999888753 11 25889999999886543 1111 223322211 225799999999997665
Q ss_pred c
Q 023723 90 D 90 (278)
Q Consensus 90 ~ 90 (278)
.
T Consensus 113 ~ 113 (421)
T 2ih2_A 113 E 113 (421)
T ss_dssp C
T ss_pred c
Confidence 4
No 160
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=93.86 E-value=0.099 Score=42.07 Aligned_cols=96 Identities=14% Similarity=0.061 Sum_probs=61.7
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCC-----C-ccccccccccccccCCCEEEeCCCC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHR-----P-YQAKRKPLSFRCQLLNNQLLRSPSP 85 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~-----~-~~~~~~~~~~~~~~~~Dll~~g~PC 85 (278)
.-+|||+.||.|.+...+...| . .+.++|+++.+++..+.|.... . ...+...... ...+|+++....-
T Consensus 33 ~~~vLdiG~G~G~~~~~l~~~~--~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~--~~~~D~v~~~~~l 107 (199)
T 2xvm_A 33 PGKTLDLGCGNGRNSLYLAANG--Y-DVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF--DRQYDFILSTVVL 107 (199)
T ss_dssp SCEEEEETCTTSHHHHHHHHTT--C-EEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC--CCCEEEEEEESCG
T ss_pred CCeEEEEcCCCCHHHHHHHHCC--C-eEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC--CCCceEEEEcchh
Confidence 4599999999999999988888 3 7889999999998888775321 1 1222221211 3468999976543
Q ss_pred CCCCcccccCCCCCCCCchHHHHhhhcCCcE--EEEE
Q 023723 86 LLGNDDMTVITKHDQPDDSWDKLLESCDPVE--RFLE 120 (278)
Q Consensus 86 q~fS~ag~~~g~~d~r~~l~~~~i~~~~P~~--~i~E 120 (278)
..++ .+....++.++.+.++|.- ++++
T Consensus 108 ~~~~--------~~~~~~~l~~~~~~L~~gG~l~~~~ 136 (199)
T 2xvm_A 108 MFLE--------AKTIPGLIANMQRCTKPGGYNLIVA 136 (199)
T ss_dssp GGSC--------GGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred hhCC--------HHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 2221 1122345566777788853 4455
No 161
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=93.84 E-value=0.12 Score=42.58 Aligned_cols=99 Identities=16% Similarity=0.096 Sum_probs=63.7
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCcc-----------ccccccccccccCCCEE
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQ-----------AKRKPLSFRCQLLNNQL 79 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~~-----------~~~~~~~~~~~~~~Dll 79 (278)
...+|||+.||.|.+...+...| . .|.++|+++.+++..+.|....... .+..... .....+|++
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~~--~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~D~v 105 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASKG--Y-SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLS-FHDSSFDFA 105 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTT--C-EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCC-SCTTCEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHhCC--C-eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccC-CCCCceeEE
Confidence 45699999999999999998888 3 6889999999999999988754431 1111111 123468988
Q ss_pred EeCCCCCCCCcccccCCCCCCCCchHHHHhhhcCCc--EEEEE
Q 023723 80 LRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPV--ERFLE 120 (278)
Q Consensus 80 ~~g~PCq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~--~~i~E 120 (278)
+.......+... +.+..++.++.+.++|. +++.+
T Consensus 106 ~~~~~l~~~~~~-------~~~~~~l~~~~~~L~pgG~l~~~~ 141 (235)
T 3sm3_A 106 VMQAFLTSVPDP-------KERSRIIKEVFRVLKPGAYLYLVE 141 (235)
T ss_dssp EEESCGGGCCCH-------HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEcchhhcCCCH-------HHHHHHHHHHHHHcCCCeEEEEEE
Confidence 876433221100 01124566677778994 44444
No 162
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=93.79 E-value=0.052 Score=46.91 Aligned_cols=70 Identities=9% Similarity=0.092 Sum_probs=47.4
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCC----ccccccccccccc----cCCCEEEeCC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP----YQAKRKPLSFRCQ----LLNNQLLRSP 83 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~----~~~~~~~~~~~~~----~~~Dll~~g~ 83 (278)
.-+|||+-||.|.++. +...+ -..|.++|+|+..++..+.|+.... +..|...++..+. ...|++++.+
T Consensus 22 ~~~VLEIG~G~G~lt~-l~~~~--~~~v~avEid~~~~~~a~~~~~~~~~v~~i~~D~~~~~~~~~~~~~~~~~~vvsNl 98 (252)
T 1qyr_A 22 GQAMVEIGPGLAALTE-PVGER--LDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRVFGNL 98 (252)
T ss_dssp TCCEEEECCTTTTTHH-HHHTT--CSCEEEECCCHHHHHHHHTCTTTGGGEEEECSCGGGCCHHHHHHHHTSCEEEEEEC
T ss_pred cCEEEEECCCCcHHHH-hhhCC--CCeEEEEECCHHHHHHHHHHhccCCceEEEECchhhCCHHHhhcccCCceEEEECC
Confidence 4589999999999999 87643 1128999999999999998875421 2333322221111 2357888888
Q ss_pred C
Q 023723 84 S 84 (278)
Q Consensus 84 P 84 (278)
|
T Consensus 99 P 99 (252)
T 1qyr_A 99 P 99 (252)
T ss_dssp C
T ss_pred C
Confidence 7
No 163
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=93.73 E-value=0.13 Score=41.69 Aligned_cols=93 Identities=13% Similarity=0.046 Sum_probs=59.4
Q ss_pred eEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCC----C-ccccccccccccccCCCEEEeCCCCCCC
Q 023723 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHR----P-YQAKRKPLSFRCQLLNNQLLRSPSPLLG 88 (278)
Q Consensus 14 ~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~----~-~~~~~~~~~~~~~~~~Dll~~g~PCq~f 88 (278)
+|||+.||.|.+...+...| . .|.++|+++.+++.-+.+.... . ...+..... .....+|+++..+.
T Consensus 32 ~vLdiGcG~G~~~~~l~~~~--~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~---- 103 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASLG--Y-EVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFD-IVADAWEGIVSIFC---- 103 (202)
T ss_dssp EEEECCCSCTHHHHHHHTTT--C-EEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBS-CCTTTCSEEEEECC----
T ss_pred CEEEECCCCCHhHHHHHhCC--C-eEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcC-CCcCCccEEEEEhh----
Confidence 99999999999999998888 3 7899999999988887776321 1 122222221 12346899997421
Q ss_pred CcccccCCCCCCCCchHHHHhhhcCCc-EEEEE
Q 023723 89 NDDMTVITKHDQPDDSWDKLLESCDPV-ERFLE 120 (278)
Q Consensus 89 S~ag~~~g~~d~r~~l~~~~i~~~~P~-~~i~E 120 (278)
.. ..+....++.++.+.++|. .+++.
T Consensus 104 ----~~--~~~~~~~~l~~~~~~L~pgG~l~~~ 130 (202)
T 2kw5_A 104 ----HL--PSSLRQQLYPKVYQGLKPGGVFILE 130 (202)
T ss_dssp ----CC--CHHHHHHHHHHHHTTCCSSEEEEEE
T ss_pred ----cC--CHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 00 0012234555677778995 44455
No 164
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=93.66 E-value=0.11 Score=43.05 Aligned_cols=76 Identities=11% Similarity=-0.014 Sum_probs=50.2
Q ss_pred CCCeEEeeecchhhHHHHHHhcCC----CceEEEEEcCCHHHHHHHHHHcCCC----------C-cccccccccc---cc
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADV----SAQVVEAFDINDKANDVYELNFGHR----------P-YQAKRKPLSF---RC 72 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~----~~~~v~a~e~~~~a~~~y~~N~~~~----------~-~~~~~~~~~~---~~ 72 (278)
...+|||+.||.|.+...+...+- +-..|.++|+++.+.+.-+.|.... . ...+...... ..
T Consensus 80 ~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 159 (227)
T 2pbf_A 80 PGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKKE 159 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCcc
Confidence 346999999999999988877641 1137899999999988888875321 1 1122111110 22
Q ss_pred ccCCCEEEeCCCCC
Q 023723 73 QLLNNQLLRSPSPL 86 (278)
Q Consensus 73 ~~~~Dll~~g~PCq 86 (278)
...+|+++...++.
T Consensus 160 ~~~fD~I~~~~~~~ 173 (227)
T 2pbf_A 160 LGLFDAIHVGASAS 173 (227)
T ss_dssp HCCEEEEEECSBBS
T ss_pred CCCcCEEEECCchH
Confidence 34689999887764
No 165
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=93.65 E-value=0.11 Score=44.18 Aligned_cols=106 Identities=11% Similarity=0.000 Sum_probs=66.6
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCccccc--c--c-ccccccc-CCCEEEeCCCC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQAKR--K--P-LSFRCQL-LNNQLLRSPSP 85 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~~~~~--~--~-~~~~~~~-~~Dll~~g~PC 85 (278)
.-+|+|+.||.|-++..+...|. ...|+|+|+++.|.+.-+.|.....+.+.+ . + .+..... .+|+++-
T Consensus 16 g~~VlDIGtGsG~l~i~la~~~~-~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~~~~D~Ivi---- 90 (225)
T 3kr9_A 16 GAILLDVGSDHAYLPIELVERGQ-IKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEETDQVSVITI---- 90 (225)
T ss_dssp TEEEEEETCSTTHHHHHHHHTTS-EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEE----
T ss_pred CCEEEEeCCCcHHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccCcCCCEEEE----
Confidence 35899999999999999988874 467899999999999999986433322210 0 0 1111222 4886663
Q ss_pred CCCCcccccCCCCCCCCchHHHHhhh----cCC-cEEEEE-eCCCc--cchhhccCc
Q 023723 86 LLGNDDMTVITKHDQPDDSWDKLLES----CDP-VERFLE-FSNSG--DQVNTETGF 134 (278)
Q Consensus 86 q~fS~ag~~~g~~d~r~~l~~~~i~~----~~P-~~~i~E-v~~~~--~~~l~~~GY 134 (278)
+|.. +.+..++++. .+| .++|+. ..... .+.|.+.||
T Consensus 91 -----aG~G-------g~~i~~Il~~~~~~L~~~~~lVlq~~~~~~~vr~~L~~~Gf 135 (225)
T 3kr9_A 91 -----AGMG-------GRLIARILEEGLGKLANVERLILQPNNREDDLRIWLQDHGF 135 (225)
T ss_dssp -----EEEC-------HHHHHHHHHHTGGGCTTCCEEEEEESSCHHHHHHHHHHTTE
T ss_pred -----cCCC-------hHHHHHHHHHHHHHhCCCCEEEEECCCCHHHHHHHHHHCCC
Confidence 2221 1244444443 455 577777 42222 666777787
No 166
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=93.62 E-value=0.13 Score=43.81 Aligned_cols=96 Identities=11% Similarity=-0.001 Sum_probs=64.3
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCc-------cccccccccccccCCCEEEeCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-------QAKRKPLSFRCQLLNNQLLRSP 83 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~-------~~~~~~~~~~~~~~~Dll~~g~ 83 (278)
...+|||+-||.|.+...+...+ ...|.++|+++.+++..+.+...... ..+...+. .....+|+++...
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~i~~~~ 122 (267)
T 3kkz_A 46 EKSLIADIGCGTGGQTMVLAGHV--TGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLP-FRNEELDLIWSEG 122 (267)
T ss_dssp TTCEEEEETCTTCHHHHHHHTTC--SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC-CCTTCEEEEEESS
T ss_pred CCCEEEEeCCCCCHHHHHHHhcc--CCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCC-CCCCCEEEEEEcC
Confidence 45799999999999999998875 34789999999999888887643221 22222111 1235789999876
Q ss_pred CCCCCCcccccCCCCCCCCchHHHHhhhcCCc--EEEEE
Q 023723 84 SPLLGNDDMTVITKHDQPDDSWDKLLESCDPV--ERFLE 120 (278)
Q Consensus 84 PCq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~--~~i~E 120 (278)
....+ | ...++.++.+.++|. +++.+
T Consensus 123 ~~~~~----------~-~~~~l~~~~~~LkpgG~l~~~~ 150 (267)
T 3kkz_A 123 AIYNI----------G-FERGLNEWRKYLKKGGYLAVSE 150 (267)
T ss_dssp CGGGT----------C-HHHHHHHHGGGEEEEEEEEEEE
T ss_pred Cceec----------C-HHHHHHHHHHHcCCCCEEEEEE
Confidence 65433 1 123566677778994 44444
No 167
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=93.62 E-value=0.11 Score=44.24 Aligned_cols=46 Identities=13% Similarity=0.039 Sum_probs=40.3
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH 58 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~ 58 (278)
.-+|+|+.||.|-++..+...|. ...|+|+|+++.|.+.-+.|...
T Consensus 22 g~~VlDIGtGsG~l~i~la~~~~-~~~V~AvDi~~~al~~A~~N~~~ 67 (230)
T 3lec_A 22 GARLLDVGSDHAYLPIFLLQMGY-CDFAIAGEVVNGPYQSALKNVSE 67 (230)
T ss_dssp TEEEEEETCSTTHHHHHHHHTTC-EEEEEEEESSHHHHHHHHHHHHH
T ss_pred CCEEEEECCchHHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHH
Confidence 35899999999999999988874 46799999999999999999743
No 168
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=93.60 E-value=0.1 Score=42.90 Aligned_cols=96 Identities=9% Similarity=-0.045 Sum_probs=61.7
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCcccccccc-ccccccCCCEEEeCCCCCCCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQAKRKPL-SFRCQLLNNQLLRSPSPLLGN 89 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~~~~~~~~-~~~~~~~~Dll~~g~PCq~fS 89 (278)
...+|||+.||.|.+...+...| ..+.++|+++.+.+.-+.+.......+. ... .......+|+++.......+
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~~---~~~~~~D~~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~~~fD~v~~~~~l~~~- 106 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIKENG---TRVSGIEAFPEAAEQAKEKLDHVVLGDI-ETMDMPYEEEQFDCVIFGDVLEHL- 106 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHHTTT---CEEEEEESSHHHHHHHHTTSSEEEESCT-TTCCCCSCTTCEEEEEEESCGGGS-
T ss_pred CCCcEEEeCCCCCHHHHHHHhcC---CeEEEEeCCHHHHHHHHHhCCcEEEcch-hhcCCCCCCCccCEEEECChhhhc-
Confidence 45799999999999999988887 4788999999999988877642222222 111 11122468999976433221
Q ss_pred cccccCCCCCCCCchHHHHhhhcCCc-EEEEE
Q 023723 90 DDMTVITKHDQPDDSWDKLLESCDPV-ERFLE 120 (278)
Q Consensus 90 ~ag~~~g~~d~r~~l~~~~i~~~~P~-~~i~E 120 (278)
.|. ..++.++.+.++|. .+++.
T Consensus 107 --------~~~-~~~l~~~~~~L~~gG~l~~~ 129 (230)
T 3cc8_A 107 --------FDP-WAVIEKVKPYIKQNGVILAS 129 (230)
T ss_dssp --------SCH-HHHHHHTGGGEEEEEEEEEE
T ss_pred --------CCH-HHHHHHHHHHcCCCCEEEEE
Confidence 122 24555566778885 44444
No 169
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=93.60 E-value=0.11 Score=44.72 Aligned_cols=45 Identities=13% Similarity=0.002 Sum_probs=39.7
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG 57 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~ 57 (278)
.-+|+|+.||.|-+...+...|. ...|+|+|+++.|.+.-+.|..
T Consensus 22 g~~VlDIGtGsG~l~i~la~~~~-~~~V~avDi~~~al~~A~~N~~ 66 (244)
T 3gnl_A 22 NERIADIGSDHAYLPCFAVKNQT-ASFAIAGEVVDGPFQSAQKQVR 66 (244)
T ss_dssp SEEEEEETCSTTHHHHHHHHTTS-EEEEEEEESSHHHHHHHHHHHH
T ss_pred CCEEEEECCccHHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHH
Confidence 35899999999999999988874 4679999999999999999964
No 170
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=93.59 E-value=0.083 Score=43.94 Aligned_cols=46 Identities=13% Similarity=0.066 Sum_probs=37.0
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG 57 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~ 57 (278)
.-+|||+.||.|..++.+.++--+--.|.++|+++.+++.-+.|+.
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~ 104 (221)
T 3u81_A 59 PSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLN 104 (221)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHH
Confidence 4689999999999999887741012478999999999999888864
No 171
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=93.58 E-value=0.034 Score=49.99 Aligned_cols=95 Identities=8% Similarity=0.023 Sum_probs=61.1
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCc-----cccccccccccccCCCEEEeCCCCC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-----QAKRKPLSFRCQLLNNQLLRSPSPL 86 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~-----~~~~~~~~~~~~~~~Dll~~g~PCq 86 (278)
.-+|+|+.||.|.+...+...+-. -.|.++|+++.+++.-+.|...... ..+.... ....+|+++..+|..
T Consensus 197 ~~~VLDlGcG~G~~~~~la~~~~~-~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~---~~~~fD~Iv~~~~~~ 272 (343)
T 2pjd_A 197 KGKVLDVGCGAGVLSVAFARHSPK-IRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSE---VKGRFDMIISNPPFH 272 (343)
T ss_dssp CSBCCBTTCTTSHHHHHHHHHCTT-CBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTT---CCSCEEEEEECCCCC
T ss_pred CCeEEEecCccCHHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHhCCCCEEEEcccccc---ccCCeeEEEECCCcc
Confidence 348999999999999998887732 2678999999999888888643221 1221111 135799999999864
Q ss_pred CCCcccccCCCCCCCCchHHHHhhhcCCc
Q 023723 87 LGNDDMTVITKHDQPDDSWDKLLESCDPV 115 (278)
Q Consensus 87 ~fS~ag~~~g~~d~r~~l~~~~i~~~~P~ 115 (278)
. |..... +....++.++.+.++|.
T Consensus 273 ~----g~~~~~-~~~~~~l~~~~~~Lkpg 296 (343)
T 2pjd_A 273 D----GMQTSL-DAAQTLIRGAVRHLNSG 296 (343)
T ss_dssp S----SSHHHH-HHHHHHHHHHGGGEEEE
T ss_pred c----CccCCH-HHHHHHHHHHHHhCCCC
Confidence 2 111000 11223455566678884
No 172
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=93.57 E-value=0.087 Score=44.26 Aligned_cols=98 Identities=13% Similarity=0.019 Sum_probs=62.4
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCC------ccccccccccccccCCCEEEeCCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP------YQAKRKPLSFRCQLLNNQLLRSPS 84 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~------~~~~~~~~~~~~~~~~Dll~~g~P 84 (278)
...+|||+.||.|.+...+...+ ...|.++|+++.+++.-+.+++... ...+..... .....+|+++....
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~ 155 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL--FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFT-PEPDSYDVIWIQWV 155 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT--CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCC-CCSSCEEEEEEESC
T ss_pred CCCEEEEECCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcC-CCCCCEEEEEEcch
Confidence 46799999999999999887776 4578999999999999999886531 112211111 11235899986532
Q ss_pred CCCCCcccccCCCCCC-CCchHHHHhhhcCCc--EEEEE
Q 023723 85 PLLGNDDMTVITKHDQ-PDDSWDKLLESCDPV--ERFLE 120 (278)
Q Consensus 85 Cq~fS~ag~~~g~~d~-r~~l~~~~i~~~~P~--~~i~E 120 (278)
-.. ..++ ...++.++.+.++|. +++.+
T Consensus 156 l~~---------~~~~~~~~~l~~~~~~LkpgG~l~i~~ 185 (241)
T 2ex4_A 156 IGH---------LTDQHLAEFLRRCKGSLRPNGIIVIKD 185 (241)
T ss_dssp GGG---------SCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhh---------CCHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 111 1111 124555667778884 34444
No 173
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=93.57 E-value=0.2 Score=42.95 Aligned_cols=87 Identities=16% Similarity=0.052 Sum_probs=57.0
Q ss_pred CCeEEeeecchhhHHHHHHhc-CCCceEEEEEcCCHHHHHHHHHHcCC------CC---ccccccccccccccCCCEEEe
Q 023723 12 AWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFGH------RP---YQAKRKPLSFRCQLLNNQLLR 81 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~a-G~~~~~v~a~e~~~~a~~~y~~N~~~------~~---~~~~~~~~~~~~~~~~Dll~~ 81 (278)
.-+|||+.||.|.++..+... |- ...|.++|+++.+++..+.|... .. ...+.... ......+|+++.
T Consensus 100 ~~~vLdiG~G~G~~~~~l~~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~-~~~~~~~D~v~~ 177 (280)
T 1i9g_A 100 GARVLEAGAGSGALTLSLLRAVGP-AGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADS-ELPDGSVDRAVL 177 (280)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCT-TSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGC-CCCTTCEEEEEE
T ss_pred CCEEEEEcccccHHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhc-CCCCCceeEEEE
Confidence 458999999999999888774 31 24789999999999888888621 11 12222111 112346899988
Q ss_pred CCCCCCCCcccccCCCCCCCCchHHHHhhhcCCc
Q 023723 82 SPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPV 115 (278)
Q Consensus 82 g~PCq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~ 115 (278)
.+|. ....+.++.+.++|.
T Consensus 178 ~~~~---------------~~~~l~~~~~~L~pg 196 (280)
T 1i9g_A 178 DMLA---------------PWEVLDAVSRLLVAG 196 (280)
T ss_dssp ESSC---------------GGGGHHHHHHHEEEE
T ss_pred CCcC---------------HHHHHHHHHHhCCCC
Confidence 5441 114566677778885
No 174
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=93.54 E-value=0.086 Score=43.35 Aligned_cols=99 Identities=13% Similarity=0.054 Sum_probs=62.4
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCC------ccccccccccccccCCCEEEeCCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP------YQAKRKPLSFRCQLLNNQLLRSPS 84 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~------~~~~~~~~~~~~~~~~Dll~~g~P 84 (278)
...+|||+.||.|.+...+...+-+...|.++|+++.+++..+.+..... ...+..... .....+|+++....
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~ 115 (219)
T 3dh0_A 37 EGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIP-LPDNTVDFIFMAFT 115 (219)
T ss_dssp TTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCS-SCSSCEEEEEEESC
T ss_pred CCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCC-CCCCCeeEEEeehh
Confidence 35699999999999998887765222478999999999888888763211 122222111 12346899997643
Q ss_pred CCCCCcccccCCCCCCCCchHHHHhhhcCCc--EEEEE
Q 023723 85 PLLGNDDMTVITKHDQPDDSWDKLLESCDPV--ERFLE 120 (278)
Q Consensus 85 Cq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~--~~i~E 120 (278)
-..+ .| ...++.++.+.++|. +++.+
T Consensus 116 l~~~---------~~-~~~~l~~~~~~LkpgG~l~i~~ 143 (219)
T 3dh0_A 116 FHEL---------SE-PLKFLEELKRVAKPFAYLAIID 143 (219)
T ss_dssp GGGC---------SS-HHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhc---------CC-HHHHHHHHHHHhCCCeEEEEEE
Confidence 2221 11 234566677778984 44445
No 175
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=93.52 E-value=0.089 Score=49.00 Aligned_cols=97 Identities=8% Similarity=0.001 Sum_probs=62.9
Q ss_pred CCCeEEeeecchhhHHHHHH-hcCCCceEEEEEcCCHHHHHHHHHHc----------CC--CC---ccccccccccc-cc
Q 023723 11 EAWRVLEFYSGIGGMRYSLM-KADVSAQVVEAFDINDKANDVYELNF----------GH--RP---YQAKRKPLSFR-CQ 73 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~-~aG~~~~~v~a~e~~~~a~~~y~~N~----------~~--~~---~~~~~~~~~~~-~~ 73 (278)
..-+|+||.||.|.+.+.+. ..| ...|+++|+++.+++.-++|. +- .. +..|....... ..
T Consensus 173 ~gd~VLDLGCGtG~l~l~lA~~~g--~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp~~d~~ 250 (438)
T 3uwp_A 173 DDDLFVDLGSGVGQVVLQVAAATN--CKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEWRERI 250 (438)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHCC--CSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHHHHHHH
T ss_pred CCCEEEEeCCCCCHHHHHHHHHCC--CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCcccccc
Confidence 34689999999999998765 456 467899999998877776642 10 11 23333222211 12
Q ss_pred cCCCEEEeCCCCCCCCcccccCCCCCCCCchHHHHhhhcCC--cEEEEE
Q 023723 74 LLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDP--VERFLE 120 (278)
Q Consensus 74 ~~~Dll~~g~PCq~fS~ag~~~g~~d~r~~l~~~~i~~~~P--~~~i~E 120 (278)
..+|+++..++| |. .|. ...+.++.+.++| ++++.|
T Consensus 251 ~~aDVVf~Nn~~--F~--------pdl-~~aL~Ei~RvLKPGGrIVssE 288 (438)
T 3uwp_A 251 ANTSVIFVNNFA--FG--------PEV-DHQLKERFANMKEGGRIVSSK 288 (438)
T ss_dssp HTCSEEEECCTT--CC--------HHH-HHHHHHHHTTSCTTCEEEESS
T ss_pred CCccEEEEcccc--cC--------chH-HHHHHHHHHcCCCCcEEEEee
Confidence 479999998776 32 111 2345677788999 677777
No 176
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=93.47 E-value=0.12 Score=43.02 Aligned_cols=98 Identities=12% Similarity=0.009 Sum_probs=61.9
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCC----C-ccccccccccccccCCCEEEeCC-C
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHR----P-YQAKRKPLSFRCQLLNNQLLRSP-S 84 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~----~-~~~~~~~~~~~~~~~~Dll~~g~-P 84 (278)
...+|||+.||.|.+...+...| . .+.++|+++.+++.-+.+.+.. . ...+...... . ..+|+++... .
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~~--~-~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~-~-~~fD~v~~~~~~ 111 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPKF--K-NTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNI-N-RKFDLITCCLDS 111 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGGS--S-EEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCC-S-CCEEEEEECTTG
T ss_pred CCCeEEEeCCCCCHHHHHHHHCC--C-cEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCCc-c-CCceEEEEcCcc
Confidence 45799999999999999998888 3 5899999999998888876432 1 1222221111 1 4689999754 2
Q ss_pred CCCCCcccccCCCCCCCCchHHHHhhhcCCc-EEEEE
Q 023723 85 PLLGNDDMTVITKHDQPDDSWDKLLESCDPV-ERFLE 120 (278)
Q Consensus 85 Cq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~-~~i~E 120 (278)
-..+ ... +....++.++.+.++|. .++++
T Consensus 112 l~~~------~~~-~~~~~~l~~~~~~L~pgG~l~~~ 141 (246)
T 1y8c_A 112 TNYI------IDS-DDLKKYFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp GGGC------CSH-HHHHHHHHHHHTTEEEEEEEEEE
T ss_pred cccc------CCH-HHHHHHHHHHHHhcCCCcEEEEE
Confidence 1111 000 11123455566678885 55566
No 177
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=93.45 E-value=0.17 Score=42.94 Aligned_cols=46 Identities=17% Similarity=0.176 Sum_probs=37.9
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH 58 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~ 58 (278)
...+|||+-||.|+++..+.+.| ...|.++|+++..++.-+.|.+.
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~g--~~~V~gvDis~~ml~~a~~~~~~ 82 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQNG--AKLVYALDVGTNQLAWKIRSDER 82 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTT--CSEEEEECSSCCCCCHHHHTCTT
T ss_pred CCCEEEEEccCCCHHHHHHHhcC--CCEEEEEcCCHHHHHHHHHhCcc
Confidence 34689999999999999988888 46899999999887765666554
No 178
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=93.44 E-value=0.027 Score=49.32 Aligned_cols=97 Identities=12% Similarity=0.130 Sum_probs=65.8
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCcccccc--c-cccccccCCCEEEeC--CCCC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQAKRK--P-LSFRCQLLNNQLLRS--PSPL 86 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~~~~~~--~-~~~~~~~~~Dll~~g--~PCq 86 (278)
.-+|+||=||.|-+++.+....- -..++++|+|+.+++.-+.|........... + .........|+++.. -||
T Consensus 133 p~~VLDLGCG~GpLAl~~~~~~p-~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~p~~~~DvaL~lkti~~- 210 (281)
T 3lcv_B 133 PNTLRDLACGLNPLAAPWMGLPA-ETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDRLDEPADVTLLLKTLPC- 210 (281)
T ss_dssp CSEEEETTCTTGGGCCTTTTCCT-TCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSCCCSCCSEEEETTCHHH-
T ss_pred CceeeeeccCccHHHHHHHhhCC-CCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccCCCCCcchHHHHHHHHH-
Confidence 56999999999999999877632 4799999999999999999974332221100 0 111123456766543 222
Q ss_pred CCCcccccCCCCC-CCCchHHHHhhhcCCcEEEEEe
Q 023723 87 LGNDDMTVITKHD-QPDDSWDKLLESCDPVERFLEF 121 (278)
Q Consensus 87 ~fS~ag~~~g~~d-~r~~l~~~~i~~~~P~~~i~Ev 121 (278)
+++ .++.+| .+++.++|..+++=|
T Consensus 211 ----------Le~q~kg~g~-~ll~aL~~~~vvVSf 235 (281)
T 3lcv_B 211 ----------LETQQRGSGW-EVIDIVNSPNIVVTF 235 (281)
T ss_dssp ----------HHHHSTTHHH-HHHHHSSCSEEEEEE
T ss_pred ----------hhhhhhHHHH-HHHHHhCCCCEEEec
Confidence 333 445666 899999998888773
No 179
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=93.43 E-value=0.15 Score=45.17 Aligned_cols=77 Identities=12% Similarity=-0.040 Sum_probs=51.7
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCc------cccccccccccccCCCEEEeCCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY------QAKRKPLSFRCQLLNNQLLRSPS 84 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~------~~~~~~~~~~~~~~~Dll~~g~P 84 (278)
...+|||+.||.|.+...+...+.+-..|.++|+++.+.+.-+.|...... ..+.... ......+|+++...+
T Consensus 75 ~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~-~~~~~~fD~Iv~~~~ 153 (317)
T 1dl5_A 75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYG-VPEFSPYDVIFVTVG 153 (317)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC-CGGGCCEEEEEECSB
T ss_pred CcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhc-cccCCCeEEEEEcCC
Confidence 346999999999999988877652113589999999999988888632211 1221111 112356899999988
Q ss_pred CCCC
Q 023723 85 PLLG 88 (278)
Q Consensus 85 Cq~f 88 (278)
+..+
T Consensus 154 ~~~~ 157 (317)
T 1dl5_A 154 VDEV 157 (317)
T ss_dssp BSCC
T ss_pred HHHH
Confidence 7543
No 180
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=93.36 E-value=0.13 Score=43.35 Aligned_cols=93 Identities=15% Similarity=0.078 Sum_probs=60.7
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCC----CC-ccccccccccccccCCCEEEeCCCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH----RP-YQAKRKPLSFRCQLLNNQLLRSPSP 85 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~----~~-~~~~~~~~~~~~~~~~Dll~~g~PC 85 (278)
...+|||+.||.|.+...+...| ..|.++|+++.+++.-+.+... .. ...+..... .....+|+++....-
T Consensus 39 ~~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~l 114 (263)
T 2yqz_A 39 EEPVFLELGVGTGRIALPLIARG---YRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIP-LPDESVHGVIVVHLW 114 (263)
T ss_dssp SCCEEEEETCTTSTTHHHHHTTT---CEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCC-SCTTCEEEEEEESCG
T ss_pred CCCEEEEeCCcCCHHHHHHHHCC---CEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCC-CCCCCeeEEEECCch
Confidence 45699999999999999998887 3688999999999999988621 11 112211111 122468999875432
Q ss_pred CCCCcccccCCCCCCCCchHHHHhhhcCCcEE
Q 023723 86 LLGNDDMTVITKHDQPDDSWDKLLESCDPVER 117 (278)
Q Consensus 86 q~fS~ag~~~g~~d~r~~l~~~~i~~~~P~~~ 117 (278)
.. ..| ...++.++.+.++|.-.
T Consensus 115 ~~---------~~~-~~~~l~~~~~~L~pgG~ 136 (263)
T 2yqz_A 115 HL---------VPD-WPKVLAEAIRVLKPGGA 136 (263)
T ss_dssp GG---------CTT-HHHHHHHHHHHEEEEEE
T ss_pred hh---------cCC-HHHHHHHHHHHCCCCcE
Confidence 22 112 23456667777888543
No 181
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=93.30 E-value=0.06 Score=47.73 Aligned_cols=102 Identities=12% Similarity=0.028 Sum_probs=61.3
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCC-------C---ccccccccccccccCCCEEEe
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHR-------P---YQAKRKPLSFRCQLLNNQLLR 81 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~-------~---~~~~~~~~~~~~~~~~Dll~~ 81 (278)
.-+|||+.||.|++...+.+.+ +...|.++|+|+..++.-+.|++.. . +..+....-......+|+|+.
T Consensus 96 ~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii~ 174 (304)
T 2o07_A 96 PRKVLIIGGGDGGVLREVVKHP-SVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVIIT 174 (304)
T ss_dssp CCEEEEEECTTSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEEE
T ss_pred CCEEEEECCCchHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEEE
Confidence 4689999999999999887763 1468899999999999999987531 1 112211100011346999999
Q ss_pred CCCCCCCCcccccCCCCCCCCchHHHHhhhcCCcE-EEEE
Q 023723 82 SPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVE-RFLE 120 (278)
Q Consensus 82 g~PCq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~~-~i~E 120 (278)
.+|... +... .......+..+.+.++|.- ++++
T Consensus 175 d~~~~~----~~~~--~l~~~~~l~~~~~~LkpgG~lv~~ 208 (304)
T 2o07_A 175 DSSDPM----GPAE--SLFKESYYQLMKTALKEDGVLCCQ 208 (304)
T ss_dssp ECC-----------------CHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCCC----Ccch--hhhHHHHHHHHHhccCCCeEEEEe
Confidence 766321 1100 0011234555666789964 4444
No 182
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=93.28 E-value=0.11 Score=45.90 Aligned_cols=46 Identities=20% Similarity=0.312 Sum_probs=38.7
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG 57 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~ 57 (278)
+..+|||+-||.|++...+.+.. +...|.++|+++.+++.-+.+++
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~a~~~~~ 140 (304)
T 3bwc_A 95 KPERVLIIGGGDGGVLREVLRHG-TVEHCDLVDIDGEVMEQSKQHFP 140 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHHTCT-TCCEEEEEESCHHHHHHHHHHCH
T ss_pred CCCeEEEEcCCCCHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHHhH
Confidence 34689999999999999887763 14688999999999999998874
No 183
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=93.23 E-value=0.26 Score=41.96 Aligned_cols=84 Identities=15% Similarity=0.145 Sum_probs=58.9
Q ss_pred CCCeEEeeecchhhHHHHHHhc--CCCceEEEEEcCCHHHHHHHHHHcCCCCc-cccccccccccccCCCEEEeCCCCCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKA--DVSAQVVEAFDINDKANDVYELNFGHRPY-QAKRKPLSFRCQLLNNQLLRSPSPLL 87 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~a--G~~~~~v~a~e~~~~a~~~y~~N~~~~~~-~~~~~~~~~~~~~~~Dll~~g~PCq~ 87 (278)
...+|||+-||.|.+...+... | ..|.++|+++.+.+.-+.+.++..+ ..+..... .....+|+++....
T Consensus 85 ~~~~vLdiG~G~G~~~~~l~~~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~--- 157 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAFADALPE---ITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLP-FSDTSMDAIIRIYA--- 157 (269)
T ss_dssp TCCEEEEETCTTSTTHHHHHHTCTT---SEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCS-BCTTCEEEEEEESC---
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCC---CeEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCC-CCCCceeEEEEeCC---
Confidence 4568999999999999888776 5 3689999999999999998865432 22222221 12246899996432
Q ss_pred CCcccccCCCCCCCCchHHHHhhhcCCc
Q 023723 88 GNDDMTVITKHDQPDDSWDKLLESCDPV 115 (278)
Q Consensus 88 fS~ag~~~g~~d~r~~l~~~~i~~~~P~ 115 (278)
...+.++.+.++|.
T Consensus 158 --------------~~~l~~~~~~L~pg 171 (269)
T 1p91_A 158 --------------PCKAEELARVVKPG 171 (269)
T ss_dssp --------------CCCHHHHHHHEEEE
T ss_pred --------------hhhHHHHHHhcCCC
Confidence 12466778888995
No 184
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=93.09 E-value=0.1 Score=42.68 Aligned_cols=95 Identities=16% Similarity=0.055 Sum_probs=60.2
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHc-CCCC-ccccccccccccccCCCEEEeCCCCCCCC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNF-GHRP-YQAKRKPLSFRCQLLNNQLLRSPSPLLGN 89 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~-~~~~-~~~~~~~~~~~~~~~~Dll~~g~PCq~fS 89 (278)
.-+|||+.||.|.+...+...| ..|.++|+++.+++.-+.+. ++.. ...+.... .....+|+++...-...
T Consensus 47 ~~~vLdiG~G~G~~~~~l~~~~---~~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~--~~~~~~D~v~~~~~l~~-- 119 (218)
T 3ou2_A 47 RGDVLELASGTGYWTRHLSGLA---DRVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDW--TPDRQWDAVFFAHWLAH-- 119 (218)
T ss_dssp CSEEEEESCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHGGGCCTTEEEEECCTTSC--CCSSCEEEEEEESCGGG--
T ss_pred CCeEEEECCCCCHHHHHHHhcC---CeEEEEeCCHHHHHHHHhcCCCCeEEEecccccC--CCCCceeEEEEechhhc--
Confidence 3599999999999999998888 36789999999998887732 1111 12222222 23457899997532111
Q ss_pred cccccCCCCCC-CCchHHHHhhhcCCc--EEEEE
Q 023723 90 DDMTVITKHDQ-PDDSWDKLLESCDPV--ERFLE 120 (278)
Q Consensus 90 ~ag~~~g~~d~-r~~l~~~~i~~~~P~--~~i~E 120 (278)
..++ ...++.++.+.++|. +++.+
T Consensus 120 -------~~~~~~~~~l~~~~~~L~pgG~l~~~~ 146 (218)
T 3ou2_A 120 -------VPDDRFEAFWESVRSAVAPGGVVEFVD 146 (218)
T ss_dssp -------SCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -------CCHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 2222 234555667778884 44444
No 185
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=93.09 E-value=0.16 Score=43.69 Aligned_cols=44 Identities=11% Similarity=-0.006 Sum_probs=38.2
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG 57 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~ 57 (278)
...+|||+-||.|....-|.+.| + .|.++|+++.+++..+++..
T Consensus 68 ~~~~vLD~GCG~G~~~~~La~~G--~-~V~gvD~S~~~i~~a~~~~~ 111 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFADRG--H-TVVGVEISEIGIREFFAEQN 111 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHHHTT--C-EEEEECSCHHHHHHHHHHTT
T ss_pred CCCeEEEeCCCCcHHHHHHHHCC--C-eEEEEECCHHHHHHHHHhcc
Confidence 45699999999999999998889 4 68999999999999877653
No 186
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=92.98 E-value=0.12 Score=43.37 Aligned_cols=72 Identities=10% Similarity=0.015 Sum_probs=48.7
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCc------cccccccccccccCCCEEEeCCCC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY------QAKRKPLSFRCQLLNNQLLRSPSP 85 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~------~~~~~~~~~~~~~~~Dll~~g~PC 85 (278)
.-+|||+.||.|.+...+...+- ..|.++|+++.+++.-+.|.....+ ..+. .........+|+++...++
T Consensus 92 ~~~vLdiG~G~G~~~~~la~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~Ii~~~~~ 168 (235)
T 1jg1_A 92 GMNILEVGTGSGWNAALISEIVK--TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDG-SKGFPPKAPYDVIIVTAGA 168 (235)
T ss_dssp TCCEEEECCTTSHHHHHHHHHHC--SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG-GGCCGGGCCEEEEEECSBB
T ss_pred CCEEEEEeCCcCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCc-ccCCCCCCCccEEEECCcH
Confidence 45899999999999988877641 4688999999999988888643211 1111 1111122348999987665
Q ss_pred C
Q 023723 86 L 86 (278)
Q Consensus 86 q 86 (278)
.
T Consensus 169 ~ 169 (235)
T 1jg1_A 169 P 169 (235)
T ss_dssp S
T ss_pred H
Confidence 4
No 187
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=92.96 E-value=0.41 Score=41.08 Aligned_cols=93 Identities=9% Similarity=-0.027 Sum_probs=58.8
Q ss_pred CCCeEEeeecchhhHHHHHH-hcCCCceEEEEEcCCHHHHHHHHHHcCCCCcccc----ccccccccccCCCEEEeCCCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLM-KADVSAQVVEAFDINDKANDVYELNFGHRPYQAK----RKPLSFRCQLLNNQLLRSPSP 85 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~-~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~~~~----~~~~~~~~~~~~Dll~~g~PC 85 (278)
...+|||+-||.|++...+. ..| . .|.++|+++..++.-+.+.......+. ..+..... ..+|+++....-
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~~~--~-~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~fD~v~~~~~l 139 (287)
T 1kpg_A 64 PGMTLLDVGCGWGATMMRAVEKYD--V-NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD-EPVDRIVSIGAF 139 (287)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHC--C-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC-CCCSEEEEESCG
T ss_pred CcCEEEEECCcccHHHHHHHHHcC--C-EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC-CCeeEEEEeCch
Confidence 34699999999999988776 557 3 789999999999988887653321111 01111112 578998865322
Q ss_pred CCCCcccccCCCCCCCCchHHHHhhhcCCc
Q 023723 86 LLGNDDMTVITKHDQPDDSWDKLLESCDPV 115 (278)
Q Consensus 86 q~fS~ag~~~g~~d~r~~l~~~~i~~~~P~ 115 (278)
..++ .+....++.++.+.++|.
T Consensus 140 ~~~~--------~~~~~~~l~~~~~~Lkpg 161 (287)
T 1kpg_A 140 EHFG--------HERYDAFFSLAHRLLPAD 161 (287)
T ss_dssp GGTC--------TTTHHHHHHHHHHHSCTT
T ss_pred hhcC--------hHHHHHHHHHHHHhcCCC
Confidence 1111 012234666677889994
No 188
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=92.94 E-value=0.17 Score=44.20 Aligned_cols=74 Identities=19% Similarity=0.233 Sum_probs=51.3
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCC--c--------cccccccccccccCCCEEE
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP--Y--------QAKRKPLSFRCQLLNNQLL 80 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~--~--------~~~~~~~~~~~~~~~Dll~ 80 (278)
+.-+|||+-||.|++...+.+.. +...|.++|+|+..++.-+.|++... . ..+....-......+|+|+
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYK-SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 156 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCeEEEEeCCcCHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEE
Confidence 34699999999999998887663 14688999999999999999987532 1 1111110001134699999
Q ss_pred eCCCC
Q 023723 81 RSPSP 85 (278)
Q Consensus 81 ~g~PC 85 (278)
..++.
T Consensus 157 ~d~~~ 161 (283)
T 2i7c_A 157 VDSSD 161 (283)
T ss_dssp EECCC
T ss_pred EcCCC
Confidence 87653
No 189
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=92.89 E-value=0.14 Score=42.47 Aligned_cols=95 Identities=9% Similarity=-0.004 Sum_probs=63.9
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCC-C-ccccccccccccccCCCEEEeCCCCCCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHR-P-YQAKRKPLSFRCQLLNNQLLRSPSPLLG 88 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~-~-~~~~~~~~~~~~~~~~Dll~~g~PCq~f 88 (278)
..-+|||+-||.|.+...+...| . .|.++|+++.+++.-+.+++.. . ...+.... .....+|+++...--..
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~~~~--~-~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~--~~~~~fD~v~~~~~l~~- 115 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSRLQEHF--N-DITCVEASEEAISHAQGRLKDGITYIHSRFEDA--QLPRRYDNIVLTHVLEH- 115 (250)
T ss_dssp CSSCEEEESCTTSHHHHHHTTTC--S-CEEEEESCHHHHHHHHHHSCSCEEEEESCGGGC--CCSSCEEEEEEESCGGG-
T ss_pred CCCcEEEECCCCCHHHHHHHHhC--C-cEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHc--CcCCcccEEEEhhHHHh-
Confidence 34589999999999999998888 3 5789999999999999998751 1 22222222 12346899987642111
Q ss_pred CcccccCCCCCCCCchHHHHh-hhcCCc-EEEEE
Q 023723 89 NDDMTVITKHDQPDDSWDKLL-ESCDPV-ERFLE 120 (278)
Q Consensus 89 S~ag~~~g~~d~r~~l~~~~i-~~~~P~-~~i~E 120 (278)
..|. ..++.++. +.++|. .+++.
T Consensus 116 --------~~~~-~~~l~~~~~~~LkpgG~l~i~ 140 (250)
T 2p7i_A 116 --------IDDP-VALLKRINDDWLAEGGRLFLV 140 (250)
T ss_dssp --------CSSH-HHHHHHHHHTTEEEEEEEEEE
T ss_pred --------hcCH-HHHHHHHHHHhcCCCCEEEEE
Confidence 2222 35666788 888994 44444
No 190
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=92.87 E-value=0.33 Score=42.45 Aligned_cols=93 Identities=10% Similarity=0.036 Sum_probs=59.4
Q ss_pred CCCeEEeeecchhhHHHHHHhc-CCCceEEEEEcCCHHHHHHHHHHcCCCCccc-c---ccccccccccCCCEEEeCCCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFGHRPYQA-K---RKPLSFRCQLLNNQLLRSPSP 85 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~a-G~~~~~v~a~e~~~~a~~~y~~N~~~~~~~~-~---~~~~~~~~~~~~Dll~~g~PC 85 (278)
...+|||+-||.|.+..-+... |. .|.++|+++..++.-+.+.......+ . ..+....+ ..+|+++....-
T Consensus 90 ~~~~vLDiGcG~G~~~~~la~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~fD~v~~~~~l 165 (318)
T 2fk8_A 90 PGMTLLDIGCGWGTTMRRAVERFDV---NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA-EPVDRIVSIEAF 165 (318)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC-CCCSEEEEESCG
T ss_pred CcCEEEEEcccchHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC-CCcCEEEEeChH
Confidence 3468999999999999888766 73 78899999999999888865432211 1 01111111 578999876432
Q ss_pred CCCCcccccCCCCCCCCchHHHHhhhcCCc
Q 023723 86 LLGNDDMTVITKHDQPDDSWDKLLESCDPV 115 (278)
Q Consensus 86 q~fS~ag~~~g~~d~r~~l~~~~i~~~~P~ 115 (278)
..++. +....++.++.+.++|.
T Consensus 166 ~~~~~--------~~~~~~l~~~~~~Lkpg 187 (318)
T 2fk8_A 166 EHFGH--------ENYDDFFKRCFNIMPAD 187 (318)
T ss_dssp GGTCG--------GGHHHHHHHHHHHSCTT
T ss_pred HhcCH--------HHHHHHHHHHHHhcCCC
Confidence 22210 12234566677789994
No 191
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=92.80 E-value=0.12 Score=42.51 Aligned_cols=95 Identities=14% Similarity=-0.027 Sum_probs=61.0
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCC---------------CC---cccccccccccc
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH---------------RP---YQAKRKPLSFRC 72 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~---------------~~---~~~~~~~~~~~~ 72 (278)
..-+|||+-||.|....-|.+.| + .|.++|+++.+++..+++... .. +..+...+...+
T Consensus 22 ~~~~vLD~GCG~G~~~~~la~~g--~-~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~ 98 (203)
T 1pjz_A 22 PGARVLVPLCGKSQDMSWLSGQG--Y-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARD 98 (203)
T ss_dssp TTCEEEETTTCCSHHHHHHHHHC--C-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHH
T ss_pred CCCEEEEeCCCCcHhHHHHHHCC--C-eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCccc
Confidence 35689999999999999998888 3 689999999999998887532 11 122222222111
Q ss_pred ccCCCEEEeCCCCCCCCcccccCCCCCCCCchHHHHhhhcCCcE
Q 023723 73 QLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVE 116 (278)
Q Consensus 73 ~~~~Dll~~g~PCq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~~ 116 (278)
...+|+++....-..+. .+.+...+.++.+.++|--
T Consensus 99 ~~~fD~v~~~~~l~~l~--------~~~~~~~l~~~~r~LkpgG 134 (203)
T 1pjz_A 99 IGHCAAFYDRAAMIALP--------ADMRERYVQHLEALMPQAC 134 (203)
T ss_dssp HHSEEEEEEESCGGGSC--------HHHHHHHHHHHHHHSCSEE
T ss_pred CCCEEEEEECcchhhCC--------HHHHHHHHHHHHHHcCCCc
Confidence 24689998633111110 1223446667888899964
No 192
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=92.71 E-value=0.12 Score=43.33 Aligned_cols=94 Identities=10% Similarity=0.052 Sum_probs=61.5
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCC----ccccccccccccccCCCEEEeCCCCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP----YQAKRKPLSFRCQLLNNQLLRSPSPL 86 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~----~~~~~~~~~~~~~~~~Dll~~g~PCq 86 (278)
...+|||+-||.|.+...+...| ...|.++|+++.+++..+.++.... ...+..... .....+|+++....-.
T Consensus 93 ~~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~l~ 169 (254)
T 1xtp_A 93 GTSRALDCGAGIGRITKNLLTKL--YATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETAT-LPPNTYDLIVIQWTAI 169 (254)
T ss_dssp CCSEEEEETCTTTHHHHHTHHHH--CSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCC-CCSSCEEEEEEESCGG
T ss_pred CCCEEEEECCCcCHHHHHHHHhh--cCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCC-CCCCCeEEEEEcchhh
Confidence 45799999999999999888877 4678999999999999999986431 112211111 1224689999754221
Q ss_pred CCCcccccCCCCCCCCchHHHHhhhcCCc
Q 023723 87 LGNDDMTVITKHDQPDDSWDKLLESCDPV 115 (278)
Q Consensus 87 ~fS~ag~~~g~~d~r~~l~~~~i~~~~P~ 115 (278)
.++ ++....++.++.+.++|.
T Consensus 170 ~~~--------~~~~~~~l~~~~~~Lkpg 190 (254)
T 1xtp_A 170 YLT--------DADFVKFFKHCQQALTPN 190 (254)
T ss_dssp GSC--------HHHHHHHHHHHHHHEEEE
T ss_pred hCC--------HHHHHHHHHHHHHhcCCC
Confidence 111 011234556677778884
No 193
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=92.69 E-value=0.25 Score=42.91 Aligned_cols=92 Identities=7% Similarity=-0.047 Sum_probs=60.4
Q ss_pred CCCeEEeeecchhhHHHHHHh--cCCCceEEEEEcCCHHHHHHHHHHcCCC-------C-cccccccccccc-----ccC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMK--ADVSAQVVEAFDINDKANDVYELNFGHR-------P-YQAKRKPLSFRC-----QLL 75 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~--aG~~~~~v~a~e~~~~a~~~y~~N~~~~-------~-~~~~~~~~~~~~-----~~~ 75 (278)
...+|||+-||.|.+...+.. .. ...|.++|+++..++..+.+.... . ...+...+.... ...
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 113 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQELKP--FEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQK 113 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHHHSSC--CSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSC
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCC--CCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCC
Confidence 467999999999999998875 23 468899999999998888874221 1 122222222111 147
Q ss_pred CCEEEeCCCCCCCCcccccCCCCCCCCchHHHHhhhcCCc
Q 023723 76 NNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPV 115 (278)
Q Consensus 76 ~Dll~~g~PCq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~ 115 (278)
+|++++......+ ....++.++.+.++|.
T Consensus 114 fD~V~~~~~l~~~-----------~~~~~l~~~~~~Lkpg 142 (299)
T 3g5t_A 114 IDMITAVECAHWF-----------DFEKFQRSAYANLRKD 142 (299)
T ss_dssp EEEEEEESCGGGS-----------CHHHHHHHHHHHEEEE
T ss_pred eeEEeHhhHHHHh-----------CHHHHHHHHHHhcCCC
Confidence 9999986543222 1234666677788994
No 194
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=92.67 E-value=0.23 Score=40.74 Aligned_cols=76 Identities=9% Similarity=0.002 Sum_probs=50.3
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCC-----C-ccccccccccccccCCCEEEeCCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHR-----P-YQAKRKPLSFRCQLLNNQLLRSPS 84 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~-----~-~~~~~~~~~~~~~~~~Dll~~g~P 84 (278)
...+|||+.||.|.+...+...+-+...|.++|+++.+.+.-+.|+... . ...+... .......+|+++...+
T Consensus 77 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~-~~~~~~~fD~v~~~~~ 155 (215)
T 2yxe_A 77 PGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTL-GYEPLAPYDRIYTTAA 155 (215)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGG-CCGGGCCEEEEEESSB
T ss_pred CCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCccc-CCCCCCCeeEEEECCc
Confidence 3569999999999998887766411247899999999988888775321 1 1122111 1111346899998877
Q ss_pred CCC
Q 023723 85 PLL 87 (278)
Q Consensus 85 Cq~ 87 (278)
+..
T Consensus 156 ~~~ 158 (215)
T 2yxe_A 156 GPK 158 (215)
T ss_dssp BSS
T ss_pred hHH
Confidence 654
No 195
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=92.67 E-value=0.23 Score=41.83 Aligned_cols=95 Identities=8% Similarity=-0.024 Sum_probs=62.7
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCc-------cccccccccccccCCCEEEeCCC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-------QAKRKPLSFRCQLLNNQLLRSPS 84 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~-------~~~~~~~~~~~~~~~Dll~~g~P 84 (278)
.-+|||+.||.|.+...+...+- ..|.++|+++.+++..+.|...... ..+...+. .....+|+++....
T Consensus 47 ~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~ 123 (257)
T 3f4k_A 47 DAKIADIGCGTGGQTLFLADYVK--GQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLP-FQNEELDLIWSEGA 123 (257)
T ss_dssp TCEEEEETCTTSHHHHHHHHHCC--SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCS-SCTTCEEEEEEESC
T ss_pred CCeEEEeCCCCCHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCC-CCCCCEEEEEecCh
Confidence 45999999999999999988862 3889999999999988887643322 12211111 12347899988754
Q ss_pred CCCCCcccccCCCCCCCCchHHHHhhhcCCc--EEEEE
Q 023723 85 PLLGNDDMTVITKHDQPDDSWDKLLESCDPV--ERFLE 120 (278)
Q Consensus 85 Cq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~--~~i~E 120 (278)
...+ | ...++.++.+.++|. +++.+
T Consensus 124 l~~~----------~-~~~~l~~~~~~L~pgG~l~~~~ 150 (257)
T 3f4k_A 124 IYNI----------G-FERGMNEWSKYLKKGGFIAVSE 150 (257)
T ss_dssp SCCC----------C-HHHHHHHHHTTEEEEEEEEEEE
T ss_pred Hhhc----------C-HHHHHHHHHHHcCCCcEEEEEE
Confidence 3322 1 124566677778884 44444
No 196
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=92.55 E-value=0.23 Score=42.06 Aligned_cols=96 Identities=10% Similarity=-0.015 Sum_probs=62.6
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCC-----CC-ccccccccccccccCCCEEEeCCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-----RP-YQAKRKPLSFRCQLLNNQLLRSPS 84 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~-----~~-~~~~~~~~~~~~~~~~Dll~~g~P 84 (278)
...+|||+-||.|.+...+...+ ..|.++|+++..++.-+.+... .. ...+...+. .....+|+++....
T Consensus 37 ~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~-~~~~~fD~V~~~~~ 112 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAFAPFV---KKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMP-FTDERFHIVTCRIA 112 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCC-SCTTCEEEEEEESC
T ss_pred CCCEEEEEeCCCCHHHHHHHHhC---CEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCC-CCCCCEEEEEEhhh
Confidence 45699999999999999998887 3788999999998887776521 11 122222111 12246899987644
Q ss_pred CCCCCcccccCCCCCCCCchHHHHhhhcCCc--EEEEE
Q 023723 85 PLLGNDDMTVITKHDQPDDSWDKLLESCDPV--ERFLE 120 (278)
Q Consensus 85 Cq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~--~~i~E 120 (278)
.+.+ .|. ..++.++.+.++|. +++.+
T Consensus 113 l~~~---------~d~-~~~l~~~~r~LkpgG~l~~~~ 140 (260)
T 1vl5_A 113 AHHF---------PNP-ASFVSEAYRVLKKGGQLLLVD 140 (260)
T ss_dssp GGGC---------SCH-HHHHHHHHHHEEEEEEEEEEE
T ss_pred hHhc---------CCH-HHHHHHHHHHcCCCCEEEEEE
Confidence 3322 222 35677788889994 44445
No 197
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=92.53 E-value=0.21 Score=41.65 Aligned_cols=96 Identities=11% Similarity=0.051 Sum_probs=62.1
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCccccc--cc-cccccccCCCEEEeC--CCCC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQAKR--KP-LSFRCQLLNNQLLRS--PSPL 86 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~~~~~--~~-~~~~~~~~~Dll~~g--~PCq 86 (278)
.-+|+||=||.|.+++.+....-.. .|+|+|+|+.+++.-++|.......... .+ ........+|++++- .||
T Consensus 50 ~~~VLDlGCG~GplAl~l~~~~p~a-~~~A~Di~~~~leiar~~~~~~g~~~~v~~~d~~~~~~~~~~DvVLa~k~LHl- 127 (200)
T 3fzg_A 50 VSSILDFGCGFNPLALYQWNENEKI-IYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNKESDVYKGTYDVVFLLKMLPV- 127 (200)
T ss_dssp CSEEEEETCTTHHHHHHHHCSSCCC-EEEEECSCHHHHHHHHHHHHHSCCSSEEEEECCHHHHTTSEEEEEEEETCHHH-
T ss_pred CCeEEEecCCCCHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCccEEEecccccCCCCCcChhhHhhHHHh-
Confidence 5699999999999999997774324 8999999999999999997432222110 01 111122346766653 122
Q ss_pred CCCcccccCCCCCCCCchHHHHhhhcCCcEEEEE
Q 023723 87 LGNDDMTVITKHDQPDDSWDKLLESCDPVERFLE 120 (278)
Q Consensus 87 ~fS~ag~~~g~~d~r~~l~~~~i~~~~P~~~i~E 120 (278)
+++.++.++ .+++.++|..+++=
T Consensus 128 ----------L~~~~~al~-~v~~~L~pggvfIS 150 (200)
T 3fzg_A 128 ----------LKQQDVNIL-DFLQLFHTQNFVIS 150 (200)
T ss_dssp ----------HHHTTCCHH-HHHHTCEEEEEEEE
T ss_pred ----------hhhhHHHHH-HHHHHhCCCCEEEE
Confidence 333444455 77777888766665
No 198
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=92.39 E-value=0.24 Score=41.54 Aligned_cols=96 Identities=11% Similarity=-0.023 Sum_probs=61.8
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCC-----CC-ccccccccccccccCCCEEEeCCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-----RP-YQAKRKPLSFRCQLLNNQLLRSPS 84 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~-----~~-~~~~~~~~~~~~~~~~Dll~~g~P 84 (278)
...+|||+.||.|.+...+...+ ..|.++|+++.+++..+.+... .. ...+...+. .....+|+++....
T Consensus 21 ~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~v~~~~~ 96 (239)
T 1xxl_A 21 AEHRVLDIGAGAGHTALAFSPYV---QECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLP-FPDDSFDIITCRYA 96 (239)
T ss_dssp TTCEEEEESCTTSHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCC-SCTTCEEEEEEESC
T ss_pred CCCEEEEEccCcCHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCC-CCCCcEEEEEECCc
Confidence 45699999999999999998887 3789999999998887776521 11 122222111 12246899997643
Q ss_pred CCCCCcccccCCCCCCCCchHHHHhhhcCCc--EEEEE
Q 023723 85 PLLGNDDMTVITKHDQPDDSWDKLLESCDPV--ERFLE 120 (278)
Q Consensus 85 Cq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~--~~i~E 120 (278)
...+ .| ...++.++.+.++|. +++.+
T Consensus 97 l~~~---------~~-~~~~l~~~~~~LkpgG~l~~~~ 124 (239)
T 1xxl_A 97 AHHF---------SD-VRKAVREVARVLKQDGRFLLVD 124 (239)
T ss_dssp GGGC---------SC-HHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhc---------cC-HHHHHHHHHHHcCCCcEEEEEE
Confidence 3222 22 234566677788994 44445
No 199
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=92.37 E-value=0.21 Score=48.02 Aligned_cols=70 Identities=14% Similarity=0.144 Sum_probs=49.2
Q ss_pred CCCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCC-c-----ccccccc-ccccccCCCEEEeC
Q 023723 10 GEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP-Y-----QAKRKPL-SFRCQLLNNQLLRS 82 (278)
Q Consensus 10 ~~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~-~-----~~~~~~~-~~~~~~~~Dll~~g 82 (278)
.++++|||+-||.|-++..|.+.| + .|.++|..+.++++-+....... . ..+...+ .......+|++++.
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~g--a-~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~ 141 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASKG--A-TIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGL 141 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHTT--C-EEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEE
T ss_pred CCCCeEEEECCCCcHHHHHHHhCC--C-EEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEEC
Confidence 457899999999999999999999 3 58999999999988776653322 1 1111111 11223579999864
No 200
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=92.32 E-value=0.18 Score=45.17 Aligned_cols=69 Identities=14% Similarity=-0.025 Sum_probs=46.3
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCc-------cccccccccccccCCCEEEeCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-------QAKRKPLSFRCQLLNNQLLRSP 83 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~-------~~~~~~~~~~~~~~~Dll~~g~ 83 (278)
+.-+|||+.||.|.+++.+.++| ...|.++|+++ .++..+.|.....+ ..+...+. .....+|+++..+
T Consensus 64 ~~~~VLDiGcGtG~ls~~la~~g--~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~~D~Ivs~~ 139 (340)
T 2fyt_A 64 KDKVVLDVGCGTGILSMFAAKAG--AKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVH-LPVEKVDVIISEW 139 (340)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTT--CSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSC-CSCSCEEEEEECC
T ss_pred CCCEEEEeeccCcHHHHHHHHcC--CCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhc-CCCCcEEEEEEcC
Confidence 34589999999999999998888 46899999996 66666666532111 22222111 1124689999764
No 201
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=92.30 E-value=0.11 Score=51.52 Aligned_cols=48 Identities=10% Similarity=-0.056 Sum_probs=31.4
Q ss_pred EEEEEcCCHHHHHHHHHHcCCCCccc-------ccccccccc-ccCCCEEEeCCCC
Q 023723 38 VVEAFDINDKANDVYELNFGHRPYQA-------KRKPLSFRC-QLLNNQLLRSPSP 85 (278)
Q Consensus 38 ~v~a~e~~~~a~~~y~~N~~~~~~~~-------~~~~~~~~~-~~~~Dll~~g~PC 85 (278)
.++++|+|+.|++.-+.|-....+.+ +...+.... ...+|+|+.-||=
T Consensus 258 ~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPY 313 (703)
T 3v97_A 258 HFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPY 313 (703)
T ss_dssp CEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCC
T ss_pred cEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCc
Confidence 68999999999999999964332222 211111111 1268999999994
No 202
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=92.21 E-value=0.16 Score=45.01 Aligned_cols=73 Identities=14% Similarity=0.100 Sum_probs=50.2
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCC--------CC---ccccccccccccccCCCEEE
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH--------RP---YQAKRKPLSFRCQLLNNQLL 80 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~--------~~---~~~~~~~~~~~~~~~~Dll~ 80 (278)
.-+|||+.||.|++...+.+.. +...|.++|+++.+++.-+.|++. .. +..|....-......+|+|+
T Consensus 78 ~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (314)
T 1uir_A 78 PKRVLIVGGGEGATLREVLKHP-TVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVI 156 (314)
T ss_dssp CCEEEEEECTTSHHHHHHTTST-TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEEE
T ss_pred CCeEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEEE
Confidence 4689999999999998887652 146889999999999999988753 11 11221111011134689999
Q ss_pred eCCCC
Q 023723 81 RSPSP 85 (278)
Q Consensus 81 ~g~PC 85 (278)
..++.
T Consensus 157 ~d~~~ 161 (314)
T 1uir_A 157 IDLTD 161 (314)
T ss_dssp EECCC
T ss_pred ECCCC
Confidence 98664
No 203
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=92.10 E-value=0.22 Score=42.45 Aligned_cols=96 Identities=11% Similarity=-0.061 Sum_probs=60.2
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCcc-------ccccc-cccc-----cccCCCE
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQ-------AKRKP-LSFR-----CQLLNNQ 78 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~~-------~~~~~-~~~~-----~~~~~Dl 78 (278)
.-+|||+.||.|..++.+..+--+--.|.++|+++...+.-+.|+....+. .+... +... ....+|+
T Consensus 80 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~ 159 (247)
T 1sui_A 80 AKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSYDF 159 (247)
T ss_dssp CCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCBSE
T ss_pred cCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCEEE
Confidence 458999999999999888765100137899999999999988887543221 11111 1111 0256899
Q ss_pred EEeCCCCCCCCcccccCCCCCCCCchHHHHhhhcCCc-EEEEE
Q 023723 79 LLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPV-ERFLE 120 (278)
Q Consensus 79 l~~g~PCq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~-~~i~E 120 (278)
++...++. .....+..+.+.++|- +++++
T Consensus 160 V~~d~~~~-------------~~~~~l~~~~~~LkpGG~lv~d 189 (247)
T 1sui_A 160 IFVDADKD-------------NYLNYHKRLIDLVKVGGVIGYD 189 (247)
T ss_dssp EEECSCST-------------THHHHHHHHHHHBCTTCCEEEE
T ss_pred EEEcCchH-------------HHHHHHHHHHHhCCCCeEEEEe
Confidence 98764321 1123444566778995 55566
No 204
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=92.03 E-value=0.2 Score=44.57 Aligned_cols=102 Identities=14% Similarity=0.054 Sum_probs=60.6
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCC--c--------cccccccccccccCCCEEEe
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP--Y--------QAKRKPLSFRCQLLNNQLLR 81 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~--~--------~~~~~~~~~~~~~~~Dll~~ 81 (278)
.-+|||+-||.|++...+.+.. +...|.++|+++.+++.-+.|++... + ..+....-......+|+|+.
T Consensus 109 ~~~VLdIG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 187 (314)
T 2b2c_A 109 PKRVLIIGGGDGGILREVLKHE-SVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIIT 187 (314)
T ss_dssp CCEEEEESCTTSHHHHHHTTCT-TCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEE
Confidence 4689999999999998887653 24688999999999999999997531 1 11111100012346999998
Q ss_pred CCCCCCCCcccccCCCCCCCCchHHHHhhhcCCc-EEEEE
Q 023723 82 SPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPV-ERFLE 120 (278)
Q Consensus 82 g~PCq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~-~~i~E 120 (278)
.++.. + +...+. -....+..+.+.++|. +++++
T Consensus 188 d~~~~-~---~~~~~l--~t~~~l~~~~~~LkpgG~lv~~ 221 (314)
T 2b2c_A 188 DSSDP-V---GPAESL--FGQSYYELLRDALKEDGILSSQ 221 (314)
T ss_dssp CCC-------------------HHHHHHHHEEEEEEEEEE
T ss_pred cCCCC-C---Ccchhh--hHHHHHHHHHhhcCCCeEEEEE
Confidence 76532 1 111000 0023344456668886 44555
No 205
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=91.97 E-value=0.35 Score=42.64 Aligned_cols=90 Identities=12% Similarity=-0.086 Sum_probs=55.8
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCC-c-ccccccccc--ccccCCCEEEeCCCCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP-Y-QAKRKPLSF--RCQLLNNQLLRSPSPL 86 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~-~-~~~~~~~~~--~~~~~~Dll~~g~PCq 86 (278)
...++||+-||.|+++..+.+.| ...|+|+|+++...+.-..+.+... . ..+...+.. ...+.+|+++...-
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~g--a~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~s-- 160 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQNG--AKLVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAEPVDFTEGLPSFASIDVS-- 160 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTT--CSEEEEECSSSSCSCHHHHTCTTEEEECSCCGGGCCGGGCTTCCCSEEEECCS--
T ss_pred cccEEEecCCCccHHHHHHHhCC--CCEEEEEECCHHHHHHHHHhCcccceecccCceecchhhCCCCCCCEEEEEee--
Confidence 35689999999999998888878 5689999999876554233333322 1 111111221 12223788876432
Q ss_pred CCCcccccCCCCCCCCchHHHHhhhcCCc
Q 023723 87 LGNDDMTVITKHDQPDDSWDKLLESCDPV 115 (278)
Q Consensus 87 ~fS~ag~~~g~~d~r~~l~~~~i~~~~P~ 115 (278)
| .. + ...+.++.+.++|.
T Consensus 161 -f--~s----l----~~vL~e~~rvLkpG 178 (291)
T 3hp7_A 161 -F--IS----L----NLILPALAKILVDG 178 (291)
T ss_dssp -S--SC----G----GGTHHHHHHHSCTT
T ss_pred -H--hh----H----HHHHHHHHHHcCcC
Confidence 1 11 1 35677788889994
No 206
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=91.95 E-value=0.19 Score=47.42 Aligned_cols=69 Identities=16% Similarity=0.144 Sum_probs=46.3
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCc-------cccccccccccccCCCEEEeCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-------QAKRKPLSFRCQLLNNQLLRSP 83 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~-------~~~~~~~~~~~~~~~Dll~~g~ 83 (278)
...+|+|+.||.|.+++.+.+.| ...|.++|+++ +++.-++|.....+ ..+...+. -...+|+|+..+
T Consensus 158 ~~~~VLDiGcGtG~la~~la~~~--~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~--~~~~fD~Ivs~~ 232 (480)
T 3b3j_A 158 KDKIVLDVGCGSGILSFFAAQAG--ARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVS--LPEQVDIIISEP 232 (480)
T ss_dssp TTCEEEEESCSTTHHHHHHHHTT--CSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCC--CSSCEEEEECCC
T ss_pred CCCEEEEecCcccHHHHHHHHcC--CCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCc--cCCCeEEEEEeC
Confidence 34699999999999999888887 46889999998 65655555432211 12211111 124689999876
Q ss_pred C
Q 023723 84 S 84 (278)
Q Consensus 84 P 84 (278)
+
T Consensus 233 ~ 233 (480)
T 3b3j_A 233 M 233 (480)
T ss_dssp C
T ss_pred c
Confidence 5
No 207
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=91.89 E-value=0.16 Score=44.22 Aligned_cols=95 Identities=14% Similarity=0.249 Sum_probs=61.9
Q ss_pred CeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCC---------ccccccccccccccCCCEEEeCC
Q 023723 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP---------YQAKRKPLSFRCQLLNNQLLRSP 83 (278)
Q Consensus 13 ~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~---------~~~~~~~~~~~~~~~~Dll~~g~ 83 (278)
-+|||+.||.|.+...+...|. .|.++|+++.+++.-+.+.+... +..+...... ...+|+++.+.
T Consensus 84 ~~vLDlGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~--~~~fD~v~~~~ 158 (299)
T 3g2m_A 84 GPVLELAAGMGRLTFPFLDLGW---EVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL--DKRFGTVVISS 158 (299)
T ss_dssp SCEEEETCTTTTTHHHHHTTTC---CEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC--SCCEEEEEECH
T ss_pred CcEEEEeccCCHHHHHHHHcCC---eEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc--CCCcCEEEECC
Confidence 3899999999999999998883 57899999999999998876532 1222222211 34689777532
Q ss_pred CCCCCCcccccCCCC-CCCCchHHHHhhhcCCc-EEEEE
Q 023723 84 SPLLGNDDMTVITKH-DQPDDSWDKLLESCDPV-ERFLE 120 (278)
Q Consensus 84 PCq~fS~ag~~~g~~-d~r~~l~~~~i~~~~P~-~~i~E 120 (278)
..-.+ .. +.+..++.++.+.++|. .++++
T Consensus 159 ~~~~~--------~~~~~~~~~l~~~~~~L~pgG~l~~~ 189 (299)
T 3g2m_A 159 GSINE--------LDEADRRGLYASVREHLEPGGKFLLS 189 (299)
T ss_dssp HHHTT--------SCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccccc--------CCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 11110 11 12345666677788994 55566
No 208
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=91.85 E-value=0.12 Score=43.77 Aligned_cols=48 Identities=8% Similarity=-0.118 Sum_probs=40.2
Q ss_pred CCCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCC
Q 023723 10 GEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHR 59 (278)
Q Consensus 10 ~~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~ 59 (278)
....+|||+-||.|.+...+...| +..|.++|+++.+++..+.+....
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~--~~~v~gvD~s~~~l~~a~~~~~~~ 102 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACES--FTEIIVSDYTDQNLWELQKWLKKE 102 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGT--EEEEEEEESCHHHHHHHHHHHTTC
T ss_pred cCCCEEEEECCCccHHHHHHhhcc--cCeEEEecCCHHHHHHHHHHHhcC
Confidence 345689999999999988887777 468899999999999988887653
No 209
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=91.83 E-value=0.34 Score=42.08 Aligned_cols=105 Identities=10% Similarity=0.004 Sum_probs=61.7
Q ss_pred CCCeEEeeecchhhHHHHHHhc-CCCceEEEEEcCCHHHHHHHHHHcCCCCcccc----ccccccccccCCCEEEeCCCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFGHRPYQAK----RKPLSFRCQLLNNQLLRSPSP 85 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~a-G~~~~~v~a~e~~~~a~~~y~~N~~~~~~~~~----~~~~~~~~~~~~Dll~~g~PC 85 (278)
...+|||+-||.|++...+.+. | ..|.++|+++..++.-+.+.......+. ..+.... ...+|+++....-
T Consensus 72 ~~~~vLDiGcG~G~~~~~la~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~fD~v~~~~~~ 147 (302)
T 3hem_A 72 PGMTLLDIGCGWGSTMRHAVAEYD---VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF-DEPVDRIVSLGAF 147 (302)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHC---CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC-CCCCSEEEEESCG
T ss_pred CcCEEEEeeccCcHHHHHHHHhCC---CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc-CCCccEEEEcchH
Confidence 3469999999999999888776 7 3588999999999988888654322111 0111111 3579999876332
Q ss_pred CCCCcccccCCCCCCCCchHHHHhhhcCCc-EEEEE
Q 023723 86 LLGNDDMTVITKHDQPDDSWDKLLESCDPV-ERFLE 120 (278)
Q Consensus 86 q~fS~ag~~~g~~d~r~~l~~~~i~~~~P~-~~i~E 120 (278)
..+.......+. +....++.++.+.++|. .+++.
T Consensus 148 ~~~~d~~~~~~~-~~~~~~l~~~~~~LkpgG~l~i~ 182 (302)
T 3hem_A 148 EHFADGAGDAGF-ERYDTFFKKFYNLTPDDGRMLLH 182 (302)
T ss_dssp GGTTCCSSCCCT-THHHHHHHHHHHSSCTTCEEEEE
T ss_pred HhcCccccccch-hHHHHHHHHHHHhcCCCcEEEEE
Confidence 221110000000 01124555677779994 34444
No 210
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=91.75 E-value=0.27 Score=40.85 Aligned_cols=73 Identities=11% Similarity=0.105 Sum_probs=48.7
Q ss_pred CCCeEEeeecchhhHHHHHHh-cCCCc------eEEEEEcCCHHHHHHHHHHcCC----------CC-cccccccccccc
Q 023723 11 EAWRVLEFYSGIGGMRYSLMK-ADVSA------QVVEAFDINDKANDVYELNFGH----------RP-YQAKRKPLSFRC 72 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~-aG~~~------~~v~a~e~~~~a~~~y~~N~~~----------~~-~~~~~~~~~~~~ 72 (278)
...+|||+.||.|.++..+.. .| . ..|.++|+++.+.+.-+.|... .. ...+... ....
T Consensus 84 ~~~~VLdiG~G~G~~~~~la~~~~--~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~~ 160 (227)
T 1r18_A 84 PGARILDVGSGSGYLTACFYRYIK--AKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK-GYPP 160 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHH--HSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGG-CCGG
T ss_pred CCCEEEEECCCccHHHHHHHHhcc--cccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCccc-CCCc
Confidence 346999999999999887765 33 1 2789999999998888777532 11 1222111 1112
Q ss_pred ccCCCEEEeCCCCC
Q 023723 73 QLLNNQLLRSPSPL 86 (278)
Q Consensus 73 ~~~~Dll~~g~PCq 86 (278)
...+|+++.+.++.
T Consensus 161 ~~~fD~I~~~~~~~ 174 (227)
T 1r18_A 161 NAPYNAIHVGAAAP 174 (227)
T ss_dssp GCSEEEEEECSCBS
T ss_pred CCCccEEEECCchH
Confidence 24689999888764
No 211
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=91.66 E-value=0.28 Score=41.23 Aligned_cols=98 Identities=12% Similarity=0.046 Sum_probs=63.7
Q ss_pred CCCeEEeeecchhhHHHHHHhc-CCCceEEEEEcCCHHHHHHHHHHcCCC-C---ccccccccccccccCCCEEEeCCCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFGHR-P---YQAKRKPLSFRCQLLNNQLLRSPSP 85 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~a-G~~~~~v~a~e~~~~a~~~y~~N~~~~-~---~~~~~~~~~~~~~~~~Dll~~g~PC 85 (278)
...+|||+-||.|.+...+... | ..|.++|+++.+++..+.+.... . ...+.... ......+|+++.....
T Consensus 55 ~~~~vLdiG~G~G~~~~~l~~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~-~~~~~~fD~v~~~~~l 130 (266)
T 3ujc_A 55 ENSKVLDIGSGLGGGCMYINEKYG---AHTHGIDICSNIVNMANERVSGNNKIIFEANDILTK-EFPENNFDLIYSRDAI 130 (266)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHC---CEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTC-CCCTTCEEEEEEESCG
T ss_pred CCCEEEEECCCCCHHHHHHHHHcC---CEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccC-CCCCCcEEEEeHHHHH
Confidence 3569999999999999988876 6 37889999999999999988653 1 12222211 1123578999975433
Q ss_pred CCCCcccccCCCCCCCCchHHHHhhhcCC--cEEEEE
Q 023723 86 LLGNDDMTVITKHDQPDDSWDKLLESCDP--VERFLE 120 (278)
Q Consensus 86 q~fS~ag~~~g~~d~r~~l~~~~i~~~~P--~~~i~E 120 (278)
..++. +....++.++.+.++| .+++.+
T Consensus 131 ~~~~~--------~~~~~~l~~~~~~L~pgG~l~~~~ 159 (266)
T 3ujc_A 131 LALSL--------ENKNKLFQKCYKWLKPTGTLLITD 159 (266)
T ss_dssp GGSCH--------HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HhcCh--------HHHHHHHHHHHHHcCCCCEEEEEE
Confidence 22210 1223456667777899 344444
No 212
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=91.51 E-value=0.27 Score=49.61 Aligned_cols=104 Identities=15% Similarity=0.074 Sum_probs=65.5
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcC-----------CCC-ccccccccccccccCCCE
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG-----------HRP-YQAKRKPLSFRCQLLNNQ 78 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~-----------~~~-~~~~~~~~~~~~~~~~Dl 78 (278)
...+|||+-||.|.+...|.+.|-+...|.++|+++.+++.-+.+.. +.. +..+...+.. ....+|+
T Consensus 721 ~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~-~d~sFDl 799 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDS-RLHDVDI 799 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCT-TSCSCCE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCc-ccCCeeE
Confidence 45689999999999999998877223588999999999888877321 111 1222222211 2357899
Q ss_pred EEeCCCCCCCCcccccCCCCCCCC-chHHHHhhhcCCcEEEEEeCCC
Q 023723 79 LLRSPSPLLGNDDMTVITKHDQPD-DSWDKLLESCDPVERFLEFSNS 124 (278)
Q Consensus 79 l~~g~PCq~fS~ag~~~g~~d~r~-~l~~~~i~~~~P~~~i~Ev~~~ 124 (278)
++...- -..+.++.. .++.++.+.++|.++++...+.
T Consensus 800 VV~~eV---------LeHL~dp~l~~~L~eI~RvLKPG~LIISTPN~ 837 (950)
T 3htx_A 800 GTCLEV---------IEHMEEDQACEFGEKVLSLFHPKLLIVSTPNY 837 (950)
T ss_dssp EEEESC---------GGGSCHHHHHHHHHHHHHTTCCSEEEEEECBG
T ss_pred EEEeCc---------hhhCChHHHHHHHHHHHHHcCCCEEEEEecCc
Confidence 988322 111333222 3455678889999777764443
No 213
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=91.49 E-value=0.48 Score=40.03 Aligned_cols=107 Identities=8% Similarity=-0.042 Sum_probs=60.0
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcC---------CCC---ccccccc-cc-cccccCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG---------HRP---YQAKRKP-LS-FRCQLLN 76 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~---------~~~---~~~~~~~-~~-~~~~~~~ 76 (278)
...++||+-||.|.+...+....- -..+.++|+++.+++.-+.|.. ... +..+... +. ......+
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p-~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~ 124 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFP-DTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQL 124 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGST-TSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCE
T ss_pred CCCeEEEEccCCcHHHHHHHHHCC-CCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCe
Confidence 456899999999999998876631 2478999999998876655421 111 1222221 11 1223468
Q ss_pred CEEEeCCCCCCCCcccccCCCCCCCCchHHHHhhhcCCc-EEEEE
Q 023723 77 NQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPV-ERFLE 120 (278)
Q Consensus 77 Dll~~g~PCq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~-~~i~E 120 (278)
|.++..+|..-+.....++.. ....++.++.+.++|. .+++.
T Consensus 125 D~v~~~~~dp~~k~~h~krr~--~~~~~l~~~~~~LkpGG~l~~~ 167 (235)
T 3ckk_A 125 TKMFFLFPDPHFKRTKHKWRI--ISPTLLAEYAYVLRVGGLVYTI 167 (235)
T ss_dssp EEEEEESCC-----------C--CCHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEEeCCCchhhhhhhhhhh--hhHHHHHHHHHHCCCCCEEEEE
Confidence 998887775443211111000 1124556677789996 44444
No 214
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=91.46 E-value=0.24 Score=44.50 Aligned_cols=96 Identities=15% Similarity=0.131 Sum_probs=55.9
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCC-------ccccccccccccccCCCEEEeCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP-------YQAKRKPLSFRCQLLNNQLLRSP 83 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~-------~~~~~~~~~~~~~~~~Dll~~g~ 83 (278)
+..+|||+.||.|.+++.+.++| ...|.++|+++.+ +..+.+..... +..+...+.. ...+|+|+..+
T Consensus 50 ~~~~VLDiGcGtG~ls~~la~~g--~~~V~~vD~s~~~-~~a~~~~~~~~l~~~v~~~~~d~~~~~~--~~~~D~Ivs~~ 124 (348)
T 2y1w_A 50 KDKIVLDVGCGSGILSFFAAQAG--ARKIYAVEASTMA-QHAEVLVKSNNLTDRIVVIPGKVEEVSL--PEQVDIIISEP 124 (348)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTT--CSEEEEEECSTHH-HHHHHHHHHTTCTTTEEEEESCTTTCCC--SSCEEEEEECC
T ss_pred CcCEEEEcCCCccHHHHHHHhCC--CCEEEEECCHHHH-HHHHHHHHHcCCCCcEEEEEcchhhCCC--CCceeEEEEeC
Confidence 34699999999999999998888 4688999999743 44444432111 1222221111 14689999876
Q ss_pred CCCCCCcccccCCCCCCCCchHHHHhhhcCCcEEEE
Q 023723 84 SPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFL 119 (278)
Q Consensus 84 PCq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~~~i~ 119 (278)
+...+ ..+.....+.++.+.++|.-+++
T Consensus 125 ~~~~~--------~~~~~~~~l~~~~~~LkpgG~li 152 (348)
T 2y1w_A 125 MGYML--------FNERMLESYLHAKKYLKPSGNMF 152 (348)
T ss_dssp CBTTB--------TTTSHHHHHHHGGGGEEEEEEEE
T ss_pred chhcC--------ChHHHHHHHHHHHhhcCCCeEEE
Confidence 52111 11111233444556678864443
No 215
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=91.17 E-value=0.43 Score=41.13 Aligned_cols=98 Identities=11% Similarity=0.082 Sum_probs=63.2
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCC-----ccccccccccccccCCCEEEeCCCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP-----YQAKRKPLSFRCQLLNNQLLRSPSP 85 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~-----~~~~~~~~~~~~~~~~Dll~~g~PC 85 (278)
...+|||+-||.|.+...+...--....|.++|+++.+.+..+.+..... ..++...... ...+|++++....
T Consensus 22 ~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~--~~~fD~v~~~~~l 99 (284)
T 3gu3_A 22 KPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIEL--NDKYDIAICHAFL 99 (284)
T ss_dssp SCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCC--SSCEEEEEEESCG
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcCc--CCCeeEEEECChh
Confidence 46799999999999999887761101477899999999999888875432 1222222221 2468999986532
Q ss_pred CCCCcccccCCCCCCCCchHHHHhhhcCCc--EEEEE
Q 023723 86 LLGNDDMTVITKHDQPDDSWDKLLESCDPV--ERFLE 120 (278)
Q Consensus 86 q~fS~ag~~~g~~d~r~~l~~~~i~~~~P~--~~i~E 120 (278)
.. ..|. ..++.++.+.++|. +++.|
T Consensus 100 ~~---------~~~~-~~~l~~~~~~LkpgG~l~~~~ 126 (284)
T 3gu3_A 100 LH---------MTTP-ETMLQKMIHSVKKGGKIICFE 126 (284)
T ss_dssp GG---------CSSH-HHHHHHHHHTEEEEEEEEEEE
T ss_pred hc---------CCCH-HHHHHHHHHHcCCCCEEEEEe
Confidence 21 1222 24666677788994 44444
No 216
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=91.14 E-value=0.46 Score=39.82 Aligned_cols=95 Identities=12% Similarity=-0.006 Sum_probs=60.0
Q ss_pred CCCeEEeeecchhhHHHHHHhc-CCCceEEEEEcCCHHHHHHHHHHcCCCCc-------cccccccccccccCCCEEEeC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFGHRPY-------QAKRKPLSFRCQLLNNQLLRS 82 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~a-G~~~~~v~a~e~~~~a~~~y~~N~~~~~~-------~~~~~~~~~~~~~~~Dll~~g 82 (278)
...+|||+-||.|.+...+... | ..|.++|+++..++.-+.|...... ..+...... ...+|+++..
T Consensus 36 ~~~~VLDiGcG~G~~~~~la~~~~---~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~~~fD~V~~~ 110 (256)
T 1nkv_A 36 PGTRILDLGSGSGEMLCTWARDHG---ITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA--NEKCDVAACV 110 (256)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHTC---CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC--SSCEEEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhcC---CeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc--CCCCCEEEEC
Confidence 3469999999999999888765 5 3579999999999888887642211 122111111 3468999873
Q ss_pred CCCCCCCcccccCCCCCCCCchHHHHhhhcCCc--EEEEE
Q 023723 83 PSPLLGNDDMTVITKHDQPDDSWDKLLESCDPV--ERFLE 120 (278)
Q Consensus 83 ~PCq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~--~~i~E 120 (278)
..... .. ....++.++.+.++|. +++.+
T Consensus 111 ~~~~~---------~~-~~~~~l~~~~r~LkpgG~l~~~~ 140 (256)
T 1nkv_A 111 GATWI---------AG-GFAGAEELLAQSLKPGGIMLIGE 140 (256)
T ss_dssp SCGGG---------TS-SSHHHHHHHTTSEEEEEEEEEEE
T ss_pred CChHh---------cC-CHHHHHHHHHHHcCCCeEEEEec
Confidence 22111 11 2334566677778994 44445
No 217
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=91.11 E-value=0.33 Score=40.46 Aligned_cols=46 Identities=11% Similarity=0.055 Sum_probs=37.9
Q ss_pred CCCeEEeeecchhhHHHHHHhc-CCCceEEEEEcCCHHHHHHHHHHcCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFGH 58 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~a-G~~~~~v~a~e~~~~a~~~y~~N~~~ 58 (278)
..-+|||+.||.|.+...+... | ...|.++|+++.+++..+.|...
T Consensus 74 ~~~~VLDlGcG~G~~~~~la~~~~--~~~v~gvD~s~~~~~~a~~~~~~ 120 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVADIAD--KGIVYAIEYAPRIMRELLDACAE 120 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHHHHTT--TSEEEEEESCHHHHHHHHHHTTT
T ss_pred CCCEEEEEcccCCHHHHHHHHHcC--CcEEEEEECCHHHHHHHHHHhhc
Confidence 3468999999999999887665 4 25789999999999988888643
No 218
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=91.07 E-value=0.39 Score=39.26 Aligned_cols=94 Identities=9% Similarity=-0.032 Sum_probs=58.4
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCcc-------cccccc-ccccccCCCEEEeCC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQ-------AKRKPL-SFRCQLLNNQLLRSP 83 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~~-------~~~~~~-~~~~~~~~Dll~~g~ 83 (278)
.-+|||+.||.|..+..+..+--+...|.++|+++.+++.-+.|+...... .+.... ... .. +|+++...
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~-~~-fD~v~~~~ 134 (210)
T 3c3p_A 57 PQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQ-RD-IDILFMDC 134 (210)
T ss_dssp CSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTC-CS-EEEEEEET
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccC-CC-CCEEEEcC
Confidence 458999999999999988776210147889999999999988887532221 111111 111 13 89998763
Q ss_pred CCCCCCcccccCCCCCCCCchHHHHhhhcCCc-EEEEE
Q 023723 84 SPLLGNDDMTVITKHDQPDDSWDKLLESCDPV-ERFLE 120 (278)
Q Consensus 84 PCq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~-~~i~E 120 (278)
++. .....+.++.+.++|. +++++
T Consensus 135 ~~~-------------~~~~~l~~~~~~LkpgG~lv~~ 159 (210)
T 3c3p_A 135 DVF-------------NGADVLERMNRCLAKNALLIAV 159 (210)
T ss_dssp TTS-------------CHHHHHHHHGGGEEEEEEEEEE
T ss_pred Chh-------------hhHHHHHHHHHhcCCCeEEEEE
Confidence 321 1123444566678885 44555
No 219
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=90.90 E-value=0.17 Score=44.18 Aligned_cols=94 Identities=11% Similarity=0.014 Sum_probs=59.6
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCcc-------ccccccccccccCCCEEEeCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQ-------AKRKPLSFRCQLLNNQLLRSP 83 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~~-------~~~~~~~~~~~~~~Dll~~g~ 83 (278)
...+|||+.||.|.+...+..+..+...|.++|+++.+++..+.|+...... .+...+. .. ..+|+++...
T Consensus 118 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~-~~fD~v~~~~ 195 (305)
T 3ocj_A 118 PGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLD-TR-EGYDLLTSNG 195 (305)
T ss_dssp TTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCC-CC-SCEEEEECCS
T ss_pred CCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCC-cc-CCeEEEEECC
Confidence 3568999999999998887322111347899999999999999998754322 2212111 12 5789998654
Q ss_pred CCCCCCcccccCCCCCCCC--chHHHHhhhcCCc
Q 023723 84 SPLLGNDDMTVITKHDQPD--DSWDKLLESCDPV 115 (278)
Q Consensus 84 PCq~fS~ag~~~g~~d~r~--~l~~~~i~~~~P~ 115 (278)
+... ..|... .++.++.+.++|.
T Consensus 196 ~~~~---------~~~~~~~~~~l~~~~~~Lkpg 220 (305)
T 3ocj_A 196 LNIY---------EPDDARVTELYRRFWQALKPG 220 (305)
T ss_dssp SGGG---------CCCHHHHHHHHHHHHHHEEEE
T ss_pred hhhh---------cCCHHHHHHHHHHHHHhcCCC
Confidence 3221 212221 2456677778994
No 220
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=90.87 E-value=0.023 Score=48.52 Aligned_cols=44 Identities=18% Similarity=0.245 Sum_probs=36.6
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG 57 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~ 57 (278)
..-+|||+.||.|.++..+...| ..|.++|+++.+++..+.|..
T Consensus 29 ~~~~VLDiG~G~G~~~~~l~~~~---~~v~~id~~~~~~~~a~~~~~ 72 (245)
T 1yub_A 29 ETDTVYEIGTGKGHLTTKLAKIS---KQVTSIELDSHLFNLSSEKLK 72 (245)
T ss_dssp SSEEEEECSCCCSSCSHHHHHHS---SEEEESSSSCSSSSSSSCTTT
T ss_pred CCCEEEEEeCCCCHHHHHHHHhC---CeEEEEECCHHHHHHHHHHhc
Confidence 34589999999999999988877 468999999988877766654
No 221
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=90.80 E-value=0.4 Score=40.19 Aligned_cols=99 Identities=18% Similarity=0.198 Sum_probs=61.3
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCC-----ccccccccccccccCCCEEEeCCCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP-----YQAKRKPLSFRCQLLNNQLLRSPSP 85 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~-----~~~~~~~~~~~~~~~~Dll~~g~PC 85 (278)
...+|||+.||.|.+...+...|. .|.++|+++.+++.-+.|..... ...+...... ...+|+++.....
T Consensus 41 ~~~~vLDlGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~--~~~fD~v~~~~~~ 115 (252)
T 1wzn_A 41 EVRRVLDLACGTGIPTLELAERGY---EVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAF--KNEFDAVTMFFST 115 (252)
T ss_dssp CCCEEEEETCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCC--CSCEEEEEECSSG
T ss_pred CCCEEEEeCCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhccc--CCCccEEEEcCCc
Confidence 346999999999999999988883 68899999999998888764221 1222221111 2468999853221
Q ss_pred CCCCcccccCCCCCCCCchHHHHhhhcCCc-EEEEEe
Q 023723 86 LLGNDDMTVITKHDQPDDSWDKLLESCDPV-ERFLEF 121 (278)
Q Consensus 86 q~fS~ag~~~g~~d~r~~l~~~~i~~~~P~-~~i~Ev 121 (278)
..+ . ..+....++.++.+.++|. .+++++
T Consensus 116 ~~~-----~--~~~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 116 IMY-----F--DEEDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp GGG-----S--CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhc-----C--CHHHHHHHHHHHHHHcCCCeEEEEec
Confidence 111 0 0011223455566678884 556663
No 222
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=90.40 E-value=0.36 Score=41.12 Aligned_cols=93 Identities=17% Similarity=0.098 Sum_probs=60.8
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCc------cccccccccccccCCCEEEeCCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY------QAKRKPLSFRCQLLNNQLLRSPS 84 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~------~~~~~~~~~~~~~~~Dll~~g~P 84 (278)
...+|||+.||.|.+...+...+- ...|.++|+++..++..+.+...... ..+..... .....+|++++...
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~ 114 (276)
T 3mgg_A 37 PGAKVLEAGCGIGAQTVILAKNNP-DAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLP-FEDSSFDHIFVCFV 114 (276)
T ss_dssp TTCEEEETTCTTSHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCC-SCTTCEEEEEEESC
T ss_pred CCCeEEEecCCCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCC-CCCCCeeEEEEech
Confidence 457999999999999998888742 24788999999999888887632211 22222111 12357899998654
Q ss_pred CCCCCcccccCCCCCCCCchHHHHhhhcCCc
Q 023723 85 PLLGNDDMTVITKHDQPDDSWDKLLESCDPV 115 (278)
Q Consensus 85 Cq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~ 115 (278)
...+ .|. ..++.++.+.++|.
T Consensus 115 l~~~---------~~~-~~~l~~~~~~L~pg 135 (276)
T 3mgg_A 115 LEHL---------QSP-EEALKSLKKVLKPG 135 (276)
T ss_dssp GGGC---------SCH-HHHHHHHHHHEEEE
T ss_pred hhhc---------CCH-HHHHHHHHHHcCCC
Confidence 3322 222 24566677778994
No 223
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=90.35 E-value=0.37 Score=39.09 Aligned_cols=92 Identities=9% Similarity=-0.057 Sum_probs=57.4
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCc------cccccccccccccCCCEEEeCCCC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY------QAKRKPLSFRCQLLNNQLLRSPSP 85 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~------~~~~~~~~~~~~~~~Dll~~g~PC 85 (278)
.-+|+|+.||.|.++..+....- ...+.++|+++.+++..+.|...... ..+..... ....+|+++...
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--~~~~~D~i~~~~-- 140 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVRP-EAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP--SEPPFDGVISRA-- 140 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC--CCSCEEEEECSC--
T ss_pred CCeEEEECCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCC--ccCCcCEEEEec--
Confidence 45899999999999988876521 24789999999999998887643221 12211111 124689988621
Q ss_pred CCCCcccccCCCCCCCCchHHHHhhhcCCc-EEEEE
Q 023723 86 LLGNDDMTVITKHDQPDDSWDKLLESCDPV-ERFLE 120 (278)
Q Consensus 86 q~fS~ag~~~g~~d~r~~l~~~~i~~~~P~-~~i~E 120 (278)
.. ....++..+.+.++|. +++++
T Consensus 141 -----------~~-~~~~~l~~~~~~L~~gG~l~~~ 164 (207)
T 1jsx_A 141 -----------FA-SLNDMVSWCHHLPGEQGRFYAL 164 (207)
T ss_dssp -----------SS-SHHHHHHHHTTSEEEEEEEEEE
T ss_pred -----------cC-CHHHHHHHHHHhcCCCcEEEEE
Confidence 11 1123444455567884 45555
No 224
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=90.13 E-value=0.25 Score=41.32 Aligned_cols=95 Identities=12% Similarity=-0.030 Sum_probs=60.9
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCcccccccc-ccccccCCCEEEeCCCCCCCCc
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQAKRKPL-SFRCQLLNNQLLRSPSPLLGND 90 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~~~~~~~~-~~~~~~~~Dll~~g~PCq~fS~ 90 (278)
..+|||+-||.|.+...+...|. .|.++|+++.+.+..+.+ -.....+.... .......+|+++...--..
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~--~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~--- 113 (240)
T 3dli_A 42 CRRVLDIGCGRGEFLELCKEEGI---ESIGVDINEDMIKFCEGK--FNVVKSDAIEYLKSLPDKYLDGVMISHFVEH--- 113 (240)
T ss_dssp CSCEEEETCTTTHHHHHHHHHTC---CEEEECSCHHHHHHHHTT--SEEECSCHHHHHHTSCTTCBSEEEEESCGGG---
T ss_pred CCeEEEEeCCCCHHHHHHHhCCC---cEEEEECCHHHHHHHHhh--cceeeccHHHHhhhcCCCCeeEEEECCchhh---
Confidence 46899999999999999988883 468999999999988877 11122221111 1222357999997532111
Q ss_pred ccccCCCCC-CCCchHHHHhhhcCCc-EEEEE
Q 023723 91 DMTVITKHD-QPDDSWDKLLESCDPV-ERFLE 120 (278)
Q Consensus 91 ag~~~g~~d-~r~~l~~~~i~~~~P~-~~i~E 120 (278)
..+ ....++.++.+.++|. .++++
T Consensus 114 ------~~~~~~~~~l~~~~~~LkpgG~l~~~ 139 (240)
T 3dli_A 114 ------LDPERLFELLSLCYSKMKYSSYIVIE 139 (240)
T ss_dssp ------SCGGGHHHHHHHHHHHBCTTCCEEEE
T ss_pred ------CCcHHHHHHHHHHHHHcCCCcEEEEE
Confidence 211 1234566677789994 45555
No 225
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=90.10 E-value=0.39 Score=40.98 Aligned_cols=46 Identities=20% Similarity=0.117 Sum_probs=37.0
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG 57 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~ 57 (278)
...+|+|+.||.|..++.+....- -..|.++|+++.+++..+.|..
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~~-~~~v~~vD~s~~~~~~a~~~~~ 125 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVRP-ELELVLVDATRKKVAFVERAIE 125 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHH
Confidence 356899999999998887766521 2478999999999999988864
No 226
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=89.83 E-value=0.57 Score=39.14 Aligned_cols=95 Identities=8% Similarity=0.046 Sum_probs=58.9
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCcc--------ccccc-cccccccCCCEEEeC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQ--------AKRKP-LSFRCQLLNNQLLRS 82 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~~--------~~~~~-~~~~~~~~~Dll~~g 82 (278)
..+|||+.||.|..++.+-.+--+--.|.++|+++...+.-+.|+....+. .+... +.......+|+++..
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~d 136 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFGQ 136 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEEC
T ss_pred CCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEEc
Confidence 458999999999999988764100147889999999999999887543322 11111 111112578999865
Q ss_pred CCCCCCCcccccCCCCCCCCchHHHHhhhcCCcEEEE
Q 023723 83 PSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFL 119 (278)
Q Consensus 83 ~PCq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~~~i~ 119 (278)
.+.. .....+.++.+.++|.-+++
T Consensus 137 ~~~~-------------~~~~~l~~~~~~LkpGG~lv 160 (221)
T 3dr5_A 137 VSPM-------------DLKALVDAAWPLLRRGGALV 160 (221)
T ss_dssp CCTT-------------THHHHHHHHHHHEEEEEEEE
T ss_pred CcHH-------------HHHHHHHHHHHHcCCCcEEE
Confidence 3211 11124555677788964443
No 227
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=89.81 E-value=0.34 Score=43.16 Aligned_cols=47 Identities=9% Similarity=0.109 Sum_probs=40.2
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP 60 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~ 60 (278)
+.-.|||.|||.|....+..+.| ....++|+++.+++.-+.+.....
T Consensus 252 ~~~~VlDpF~GsGtt~~aa~~~g---r~~ig~e~~~~~~~~~~~r~~~~~ 298 (323)
T 1boo_A 252 PDDLVVDIFGGSNTTGLVAERES---RKWISFEMKPEYVAASAFRFLDNN 298 (323)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT---CEEEEEESCHHHHHHHHGGGSCSC
T ss_pred CCCEEEECCCCCCHHHHHHHHcC---CCEEEEeCCHHHHHHHHHHHHhcc
Confidence 34579999999999999999999 466789999999999988876543
No 228
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=89.67 E-value=0.37 Score=40.48 Aligned_cols=44 Identities=14% Similarity=-0.056 Sum_probs=34.7
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHc
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNF 56 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~ 56 (278)
.-+|||+.||.|.++..+....- ...|.++|+++.+++..+.|.
T Consensus 71 ~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~s~~~~~~a~~~~ 114 (240)
T 1xdz_A 71 VNTICDVGAGAGFPSLPIKICFP-HLHVTIVDSLNKRITFLEKLS 114 (240)
T ss_dssp CCEEEEECSSSCTTHHHHHHHCT-TCEEEEEESCHHHHHHHHHHH
T ss_pred CCEEEEecCCCCHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHH
Confidence 46899999999988877764321 246899999999988888775
No 229
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=89.51 E-value=0.48 Score=43.01 Aligned_cols=94 Identities=14% Similarity=0.007 Sum_probs=59.8
Q ss_pred CCCeEEeeecchhhHHHHHHhc-CCCceEEEEEcCCHHHHHHHHHHcC-------------CCC-ccccccccc-----c
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFG-------------HRP-YQAKRKPLS-----F 70 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~a-G~~~~~v~a~e~~~~a~~~y~~N~~-------------~~~-~~~~~~~~~-----~ 70 (278)
...+|||+-||.|.+...+... |- .-.|.++|+++.+++.-+.|.. +.. ...+...+. .
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~ 161 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLVGE-HGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEG 161 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHTT-TCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCC
T ss_pred CCCEEEEecCccCHHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCC
Confidence 4568999999999998877654 21 2378999999999998888742 111 223322221 1
Q ss_pred ccccCCCEEEeCCCCCCCCcccccCCCCCCCCchHHHHhhhcCCc
Q 023723 71 RCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPV 115 (278)
Q Consensus 71 ~~~~~~Dll~~g~PCq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~ 115 (278)
.....+|+++....-.. ..| ...++.++.+.++|.
T Consensus 162 ~~~~~fD~V~~~~~l~~---------~~d-~~~~l~~~~r~Lkpg 196 (383)
T 4fsd_A 162 VPDSSVDIVISNCVCNL---------STN-KLALFKEIHRVLRDG 196 (383)
T ss_dssp CCTTCEEEEEEESCGGG---------CSC-HHHHHHHHHHHEEEE
T ss_pred CCCCCEEEEEEccchhc---------CCC-HHHHHHHHHHHcCCC
Confidence 22347999997643222 122 235666777889994
No 230
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=89.44 E-value=1.3 Score=37.59 Aligned_cols=91 Identities=7% Similarity=-0.144 Sum_probs=58.5
Q ss_pred CCeEEeeecchhhHHHHHHhc-CCCceEEEEEcCCHHHHHHHHHHcCCCC-c---cccccccc--cccccCCCEEEeCCC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFGHRP-Y---QAKRKPLS--FRCQLLNNQLLRSPS 84 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~a-G~~~~~v~a~e~~~~a~~~y~~N~~~~~-~---~~~~~~~~--~~~~~~~Dll~~g~P 84 (278)
..+|+||-||.|.+..-+.+. |- --.|+|+|+++...+..+++..... + ..+..... ......+|+++..++
T Consensus 78 G~~VldlG~G~G~~~~~la~~VG~-~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vDvVf~d~~ 156 (233)
T 4df3_A 78 GDRILYLGIASGTTASHMSDIIGP-RGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDGLYADVA 156 (233)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCT-TCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEEEEEECCC
T ss_pred CCEEEEecCcCCHHHHHHHHHhCC-CceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEEEEEEecc
Confidence 479999999999998887653 42 2378999999999999888876532 1 11211111 112346888876554
Q ss_pred CCCCCcccccCCCCCCCCchHHHHhhhcCCc
Q 023723 85 PLLGNDDMTVITKHDQPDDSWDKLLESCDPV 115 (278)
Q Consensus 85 Cq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~ 115 (278)
.. +.....+.++.+.+||.
T Consensus 157 ~~------------~~~~~~l~~~~r~LKpG 175 (233)
T 4df3_A 157 QP------------EQAAIVVRNARFFLRDG 175 (233)
T ss_dssp CT------------THHHHHHHHHHHHEEEE
T ss_pred CC------------hhHHHHHHHHHHhccCC
Confidence 32 11123555677778994
No 231
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=89.26 E-value=0.18 Score=39.29 Aligned_cols=72 Identities=10% Similarity=0.050 Sum_probs=45.5
Q ss_pred CCCeEEeeecchhhHHHHHHhc-CCCceEEEEEcCCHHHHHHHHHHcCCCC-cccccccccc-------ccccCCCEEEe
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFGHRP-YQAKRKPLSF-------RCQLLNNQLLR 81 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~a-G~~~~~v~a~e~~~~a~~~y~~N~~~~~-~~~~~~~~~~-------~~~~~~Dll~~ 81 (278)
..-+|||+.||.|.+...+.+. |. -..+.++|+++ .... +... ...+...... .....+|+++.
T Consensus 22 ~~~~vLd~G~G~G~~~~~l~~~~~~-~~~v~~~D~~~-~~~~-----~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i~~ 94 (180)
T 1ej0_A 22 PGMTVVDLGAAPGGWSQYVVTQIGG-KGRIIACDLLP-MDPI-----VGVDFLQGDFRDELVMKALLERVGDSKVQVVMS 94 (180)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCT-TCEEEEEESSC-CCCC-----TTEEEEESCTTSHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHHhCC-CCeEEEEECcc-cccc-----CcEEEEEcccccchhhhhhhccCCCCceeEEEE
Confidence 3459999999999999888776 42 14788999998 5432 2111 1222211110 22246999999
Q ss_pred CCCCCCCC
Q 023723 82 SPSPLLGN 89 (278)
Q Consensus 82 g~PCq~fS 89 (278)
.+|+..+.
T Consensus 95 ~~~~~~~~ 102 (180)
T 1ej0_A 95 DMAPNMSG 102 (180)
T ss_dssp CCCCCCCS
T ss_pred CCCccccC
Confidence 99886543
No 232
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=89.26 E-value=0.57 Score=40.96 Aligned_cols=95 Identities=9% Similarity=-0.048 Sum_probs=61.3
Q ss_pred CCCeEEeeecchhhHHHHHHhc-CCCceEEEEEcCCHHHHHHHHHHcCCCCc-------cccccccccccccCCCEEEeC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFGHRPY-------QAKRKPLSFRCQLLNNQLLRS 82 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~a-G~~~~~v~a~e~~~~a~~~y~~N~~~~~~-------~~~~~~~~~~~~~~~Dll~~g 82 (278)
..-+|||+.||.|.+...+.+. | ..|.++|+++.+++..+.|.....+ ..+..... .....+|+++..
T Consensus 117 ~~~~vLDiGcG~G~~~~~la~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~V~~~ 192 (312)
T 3vc1_A 117 PDDTLVDAGCGRGGSMVMAHRRFG---SRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTP-FDKGAVTASWNN 192 (312)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHC---CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC-CCTTCEEEEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHHcC---CEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCC-CCCCCEeEEEEC
Confidence 3568999999999999988776 6 3688999999999988887643221 12222111 123478999864
Q ss_pred CCCCCCCcccccCCCCCCCCchHHHHhhhcCC--cEEEEE
Q 023723 83 PSPLLGNDDMTVITKHDQPDDSWDKLLESCDP--VERFLE 120 (278)
Q Consensus 83 ~PCq~fS~ag~~~g~~d~r~~l~~~~i~~~~P--~~~i~E 120 (278)
..... . | ...++.++.+.++| .+++.+
T Consensus 193 ~~l~~---------~-~-~~~~l~~~~~~LkpgG~l~~~~ 221 (312)
T 3vc1_A 193 ESTMY---------V-D-LHDLFSEHSRFLKVGGRYVTIT 221 (312)
T ss_dssp SCGGG---------S-C-HHHHHHHHHHHEEEEEEEEEEE
T ss_pred Cchhh---------C-C-HHHHHHHHHHHcCCCcEEEEEE
Confidence 22111 1 2 33456667777899 455555
No 233
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=89.05 E-value=0.27 Score=40.22 Aligned_cols=34 Identities=21% Similarity=0.239 Sum_probs=28.8
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHH
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDK 47 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~ 47 (278)
...+||||.||.|+++.-+.+.+ -.|.++|+++.
T Consensus 25 ~g~~VLDlG~G~G~~s~~la~~~---~~V~gvD~~~~ 58 (191)
T 3dou_A 25 KGDAVIEIGSSPGGWTQVLNSLA---RKIISIDLQEM 58 (191)
T ss_dssp TTCEEEEESCTTCHHHHHHTTTC---SEEEEEESSCC
T ss_pred CCCEEEEEeecCCHHHHHHHHcC---CcEEEEecccc
Confidence 35799999999999999887765 47889999975
No 234
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=89.05 E-value=0.69 Score=39.86 Aligned_cols=96 Identities=13% Similarity=0.087 Sum_probs=60.5
Q ss_pred CCCeEEeeecchhhHHHHHHhc-CCCceEEEEEcCCHHHHHHHHHHcCCC------C-ccccccccccccccCCCEEEeC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFGHR------P-YQAKRKPLSFRCQLLNNQLLRS 82 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~a-G~~~~~v~a~e~~~~a~~~y~~N~~~~------~-~~~~~~~~~~~~~~~~Dll~~g 82 (278)
...+|||+-||.|.+...+... |. .|.++|+++.+++.-+.+.... . ...+...+. .....+|+++..
T Consensus 82 ~~~~vLDiGcG~G~~~~~l~~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~ 157 (297)
T 2o57_A 82 RQAKGLDLGAGYGGAARFLVRKFGV---SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIP-CEDNSYDFIWSQ 157 (297)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCS-SCTTCEEEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCC---EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCC-CCCCCEeEEEec
Confidence 4569999999999999888776 62 6889999999888877765221 1 112211111 112468988875
Q ss_pred CCCCCCCcccccCCCCCCCCchHHHHhhhcCCc--EEEEE
Q 023723 83 PSPLLGNDDMTVITKHDQPDDSWDKLLESCDPV--ERFLE 120 (278)
Q Consensus 83 ~PCq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~--~~i~E 120 (278)
..-.. ..| ...++.++.+.++|. +++.+
T Consensus 158 ~~l~~---------~~~-~~~~l~~~~~~LkpgG~l~~~~ 187 (297)
T 2o57_A 158 DAFLH---------SPD-KLKVFQECARVLKPRGVMAITD 187 (297)
T ss_dssp SCGGG---------CSC-HHHHHHHHHHHEEEEEEEEEEE
T ss_pred chhhh---------cCC-HHHHHHHHHHHcCCCeEEEEEE
Confidence 33222 222 335666777889994 44444
No 235
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=88.91 E-value=1 Score=38.11 Aligned_cols=96 Identities=17% Similarity=0.056 Sum_probs=60.3
Q ss_pred CCCeEEeeecchhhHHHHHHhc-CCCceEEEEEcCCHHHHHHHHHHcCCCCc-------cccccccccccccCCCEEEeC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFGHRPY-------QAKRKPLSFRCQLLNNQLLRS 82 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~a-G~~~~~v~a~e~~~~a~~~y~~N~~~~~~-------~~~~~~~~~~~~~~~Dll~~g 82 (278)
...+|||+-||.|.+...+.+. | ..|.++|+++..++.-+.+...... ..+..... .....+|+++..
T Consensus 61 ~~~~vLDiGcG~G~~~~~l~~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~ 136 (273)
T 3bus_A 61 SGDRVLDVGCGIGKPAVRLATARD---VRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLP-FEDASFDAVWAL 136 (273)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHSC---CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC-SCTTCEEEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhcC---CEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCC-CCCCCccEEEEe
Confidence 4569999999999999888664 5 4788999999998888777542211 11211111 112468998875
Q ss_pred CCCCCCCcccccCCCCCCCCchHHHHhhhcCCc--EEEEE
Q 023723 83 PSPLLGNDDMTVITKHDQPDDSWDKLLESCDPV--ERFLE 120 (278)
Q Consensus 83 ~PCq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~--~~i~E 120 (278)
..-..+ .| ...++.++.+.++|. +++.+
T Consensus 137 ~~l~~~---------~~-~~~~l~~~~~~L~pgG~l~i~~ 166 (273)
T 3bus_A 137 ESLHHM---------PD-RGRALREMARVLRPGGTVAIAD 166 (273)
T ss_dssp SCTTTS---------SC-HHHHHHHHHTTEEEEEEEEEEE
T ss_pred chhhhC---------CC-HHHHHHHHHHHcCCCeEEEEEE
Confidence 443222 12 234566677778995 44444
No 236
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=88.54 E-value=0.61 Score=40.06 Aligned_cols=104 Identities=15% Similarity=0.047 Sum_probs=62.3
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCC---------Cc-cccccccc--cccccCCCE
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHR---------PY-QAKRKPLS--FRCQLLNNQ 78 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~---------~~-~~~~~~~~--~~~~~~~Dl 78 (278)
...+|||+.||.|.+...+...| . .|.++|+++.+++.-+.|.... .+ ..+..... ......+|+
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~~--~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~ 133 (293)
T 3thr_A 57 GCHRVLDVACGTGVDSIMLVEEG--F-SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDA 133 (293)
T ss_dssp TCCEEEETTCTTSHHHHHHHHTT--C-EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHCC--C-eEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeEE
Confidence 34689999999999999999998 3 7889999999998888764111 11 11111111 012357999
Q ss_pred EEeC-CCCCCCCcccccCCCCCCCCchHHHHhhhcCCc-EEEEE
Q 023723 79 LLRS-PSPLLGNDDMTVITKHDQPDDSWDKLLESCDPV-ERFLE 120 (278)
Q Consensus 79 l~~g-~PCq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~-~~i~E 120 (278)
++.. .....+... .+..+....++.++.+.++|. +++++
T Consensus 134 V~~~g~~l~~~~~~---~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (293)
T 3thr_A 134 VICLGNSFAHLPDS---KGDQSEHRLALKNIASMVRPGGLLVID 174 (293)
T ss_dssp EEECTTCGGGSCCS---SSSSHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred EEEcChHHhhcCcc---ccCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 9874 222111100 000112334666677789995 45555
No 237
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=87.98 E-value=0.35 Score=41.13 Aligned_cols=95 Identities=9% Similarity=0.032 Sum_probs=59.6
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCC-ccccccccccccccCCCEEEeCCCCCCCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP-YQAKRKPLSFRCQLLNNQLLRSPSPLLGN 89 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~-~~~~~~~~~~~~~~~~Dll~~g~PCq~fS 89 (278)
...+|||+-||.|.+...+...| ..|.++|+++...+.-+.+. +.. ...+..... .....+|+++.......+
T Consensus 34 ~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~-~~~~~~~d~~~~~-~~~~~fD~v~~~~~l~~~- 107 (261)
T 3ege_A 34 KGSVIADIGAGTGGYSVALANQG---LFVYAVEPSIVMRQQAVVHP-QVEWFTGYAENLA-LPDKSVDGVISILAIHHF- 107 (261)
T ss_dssp TTCEEEEETCTTSHHHHHHHTTT---CEEEEECSCHHHHHSSCCCT-TEEEECCCTTSCC-SCTTCBSEEEEESCGGGC-
T ss_pred CCCEEEEEcCcccHHHHHHHhCC---CEEEEEeCCHHHHHHHHhcc-CCEEEECchhhCC-CCCCCEeEEEEcchHhhc-
Confidence 45799999999999999998877 47789999998877544443 111 223322221 123579999987553322
Q ss_pred cccccCCCCCCCCchHHHHhhhcCC-cEEEEE
Q 023723 90 DDMTVITKHDQPDDSWDKLLESCDP-VERFLE 120 (278)
Q Consensus 90 ~ag~~~g~~d~r~~l~~~~i~~~~P-~~~i~E 120 (278)
.| ...++.++.+.++- .+++++
T Consensus 108 --------~~-~~~~l~~~~~~LkgG~~~~~~ 130 (261)
T 3ege_A 108 --------SH-LEKSFQEMQRIIRDGTIVLLT 130 (261)
T ss_dssp --------SS-HHHHHHHHHHHBCSSCEEEEE
T ss_pred --------cC-HHHHHHHHHHHhCCcEEEEEE
Confidence 12 23456667776662 255555
No 238
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=87.87 E-value=0.64 Score=40.59 Aligned_cols=45 Identities=20% Similarity=0.225 Sum_probs=37.0
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG 57 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~ 57 (278)
...+|||+.||.|++...+...+ ...+.++|+++.+++.-+.++.
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~--~~~v~gvD~s~~~l~~a~~~~~ 78 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGR--INKLVCTDIADVSVKQCQQRYE 78 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTT--CSEEEEEESCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCcHHHHHHHhcC--CCEEEEEeCCHHHHHHHHHHHH
Confidence 45699999999999998888765 3688999999998888777653
No 239
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=87.61 E-value=0.91 Score=37.92 Aligned_cols=46 Identities=15% Similarity=0.107 Sum_probs=37.1
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG 57 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~ 57 (278)
.-+|||+.||.|..+..+....-+...|.++|+++.+++.-+.|+.
T Consensus 61 ~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~ 106 (239)
T 2hnk_A 61 AKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWK 106 (239)
T ss_dssp CSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHH
T ss_pred cCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH
Confidence 4589999999999998887762112478999999999998888864
No 240
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=87.57 E-value=0.53 Score=41.43 Aligned_cols=43 Identities=16% Similarity=0.091 Sum_probs=34.2
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHc
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNF 56 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~ 56 (278)
..+|||+-||.|+....+...| ...|.++|+++.+++.-+..+
T Consensus 49 ~~~VLDlGCG~G~~l~~~~~~~--~~~v~GiD~S~~~l~~A~~~~ 91 (302)
T 2vdw_A 49 KRKVLAIDFGNGADLEKYFYGE--IALLVATDPDADAIARGNERY 91 (302)
T ss_dssp CCEEEETTCTTTTTHHHHHHTT--CSEEEEEESCHHHHHHHHHHH
T ss_pred CCeEEEEecCCcHhHHHHHhcC--CCeEEEEECCHHHHHHHHHHH
Confidence 5789999999998666565566 357899999999888777654
No 241
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=87.25 E-value=1.4 Score=35.52 Aligned_cols=98 Identities=9% Similarity=-0.055 Sum_probs=57.7
Q ss_pred CCCeEEeeecchhhHH-HHHHhcCCCceEEEEEcCCHHHHHHHHHHcC----CCC-ccccccccccccccCCCEEEeCCC
Q 023723 11 EAWRVLEFYSGIGGMR-YSLMKADVSAQVVEAFDINDKANDVYELNFG----HRP-YQAKRKPLSFRCQLLNNQLLRSPS 84 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~-~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~----~~~-~~~~~~~~~~~~~~~~Dll~~g~P 84 (278)
...+|||+-||.|.+. .-+...| ..|.++|+++.+++.-+.+.. ... ...+..... .....+|++++...
T Consensus 23 ~~~~vLDiGcG~G~~~~~~~~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~ 98 (209)
T 2p8j_A 23 LDKTVLDCGAGGDLPPLSIFVEDG---YKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLP-FKDESMSFVYSYGT 98 (209)
T ss_dssp SCSEEEEESCCSSSCTHHHHHHTT---CEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCC-SCTTCEEEEEECSC
T ss_pred CCCEEEEECCCCCHHHHHHHHhCC---CEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCC-CCCCceeEEEEcCh
Confidence 3569999999999873 4445566 368899999999888777642 221 122222111 12246899997643
Q ss_pred CCCCCcccccCCCCCCCCchHHHHhhhcCCc-EEEEE
Q 023723 85 PLLGNDDMTVITKHDQPDDSWDKLLESCDPV-ERFLE 120 (278)
Q Consensus 85 Cq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~-~~i~E 120 (278)
...++ .+....++.++.+.++|. .+++.
T Consensus 99 l~~~~--------~~~~~~~l~~~~~~LkpgG~l~~~ 127 (209)
T 2p8j_A 99 IFHMR--------KNDVKEAIDEIKRVLKPGGLACIN 127 (209)
T ss_dssp GGGSC--------HHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHhCC--------HHHHHHHHHHHHHHcCCCcEEEEE
Confidence 22211 012234556677778994 44444
No 242
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=87.20 E-value=0.34 Score=41.43 Aligned_cols=45 Identities=13% Similarity=0.015 Sum_probs=37.6
Q ss_pred CCCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHc
Q 023723 10 GEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNF 56 (278)
Q Consensus 10 ~~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~ 56 (278)
....+|||+=||.|.+...+...| +..|.++|+++.+++..+.+.
T Consensus 54 ~~g~~vLDiGCG~G~~~~~~~~~~--~~~v~g~D~s~~~l~~a~~~~ 98 (263)
T 2a14_A 54 LQGDTLIDIGSGPTIYQVLAACDS--FQDITLSDFTDRNREELEKWL 98 (263)
T ss_dssp CCEEEEEESSCTTCCGGGTTGGGT--EEEEEEEESCHHHHHHHHHHH
T ss_pred CCCceEEEeCCCccHHHHHHHHhh--hcceeeccccHHHHHHHHHHH
Confidence 445789999999998877766777 678999999999999887764
No 243
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=87.08 E-value=0.32 Score=41.85 Aligned_cols=90 Identities=16% Similarity=0.051 Sum_probs=57.0
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCc-cccccccccccccCCCEEEeCCCCCCCCc
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-QAKRKPLSFRCQLLNNQLLRSPSPLLGND 90 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~-~~~~~~~~~~~~~~~Dll~~g~PCq~fS~ 90 (278)
.-+|||+=||.|.++..|...| ..|.++|+++..++.-+. +++..+ ..+...+. .....+|+++++--..
T Consensus 40 ~~~vLDvGcGtG~~~~~l~~~~---~~v~gvD~s~~ml~~a~~-~~~v~~~~~~~e~~~-~~~~sfD~v~~~~~~h---- 110 (257)
T 4hg2_A 40 RGDALDCGCGSGQASLGLAEFF---ERVHAVDPGEAQIRQALR-HPRVTYAVAPAEDTG-LPPASVDVAIAAQAMH---- 110 (257)
T ss_dssp SSEEEEESCTTTTTHHHHHTTC---SEEEEEESCHHHHHTCCC-CTTEEEEECCTTCCC-CCSSCEEEEEECSCCT----
T ss_pred CCCEEEEcCCCCHHHHHHHHhC---CEEEEEeCcHHhhhhhhh-cCCceeehhhhhhhc-ccCCcccEEEEeeehh----
Confidence 3589999999999999998887 467899999988765432 232221 22211111 2235689999743221
Q ss_pred ccccCCCCCCCCchHHHHhhhcCCcEE
Q 023723 91 DMTVITKHDQPDDSWDKLLESCDPVER 117 (278)
Q Consensus 91 ag~~~g~~d~r~~l~~~~i~~~~P~~~ 117 (278)
. . | ....+.++.|.++|--.
T Consensus 111 ---~--~-~-~~~~~~e~~rvLkpgG~ 130 (257)
T 4hg2_A 111 ---W--F-D-LDRFWAELRRVARPGAV 130 (257)
T ss_dssp ---T--C-C-HHHHHHHHHHHEEEEEE
T ss_pred ---H--h-h-HHHHHHHHHHHcCCCCE
Confidence 1 1 2 22467778888999543
No 244
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=86.97 E-value=0.55 Score=41.82 Aligned_cols=46 Identities=13% Similarity=0.094 Sum_probs=37.2
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCH---HHHHHHHHHcCCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDIND---KANDVYELNFGHR 59 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~---~a~~~y~~N~~~~ 59 (278)
+.-.|||.|||.|....+..+.| ....++|+++ ..++.-+.+....
T Consensus 242 ~~~~vlDpF~GsGtt~~aa~~~~---r~~ig~e~~~~~~~~~~~~~~Rl~~~ 290 (319)
T 1eg2_A 242 PGSTVLDFFAGSGVTARVAIQEG---RNSICTDAAPVFKEYYQKQLTFLQDD 290 (319)
T ss_dssp TTCEEEETTCTTCHHHHHHHHHT---CEEEEEESSTHHHHHHHHHHHHC---
T ss_pred CCCEEEecCCCCCHHHHHHHHcC---CcEEEEECCccHHHHHHHHHHHHHHc
Confidence 34579999999999999999999 4667899999 8888888776543
No 245
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=86.74 E-value=0.96 Score=43.17 Aligned_cols=74 Identities=12% Similarity=0.087 Sum_probs=47.2
Q ss_pred CCeEEeeecchhhHHHHHHh----cCCC--------ceEEEEEcCCHHHHHHHHHHc---C--CCC-cccccccc---cc
Q 023723 12 AWRVLEFYSGIGGMRYSLMK----ADVS--------AQVVEAFDINDKANDVYELNF---G--HRP-YQAKRKPL---SF 70 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~----aG~~--------~~~v~a~e~~~~a~~~y~~N~---~--~~~-~~~~~~~~---~~ 70 (278)
.-+|+|-+||.|||-+.+.+ .+-. -..++++|+++.+...-+.|. + ... ...+.+.. +.
T Consensus 218 ~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~~~~I~~~dtL~~~~~~~ 297 (530)
T 3ufb_A 218 GESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLEYPRIDPENSLRFPLREM 297 (530)
T ss_dssp TCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCSCCEEECSCTTCSCGGGC
T ss_pred CCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCccccccccccccCchhhh
Confidence 34899999999999765432 1100 135899999999988877763 2 111 22332221 12
Q ss_pred ccccCCCEEEeCCCC
Q 023723 71 RCQLLNNQLLRSPSP 85 (278)
Q Consensus 71 ~~~~~~Dll~~g~PC 85 (278)
.+...+|++++-||=
T Consensus 298 ~~~~~fD~Il~NPPf 312 (530)
T 3ufb_A 298 GDKDRVDVILTNPPF 312 (530)
T ss_dssp CGGGCBSEEEECCCS
T ss_pred cccccceEEEecCCC
Confidence 234579999999994
No 246
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=86.68 E-value=1 Score=37.75 Aligned_cols=47 Identities=13% Similarity=-0.043 Sum_probs=37.7
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH 58 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~ 58 (278)
.-+|||+.||.|..++.+-++--+...|.++|+++...+.-+.|+..
T Consensus 71 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~ 117 (237)
T 3c3y_A 71 AKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRK 117 (237)
T ss_dssp CCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH
Confidence 45899999999999988876510014788999999999999988754
No 247
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=86.19 E-value=1.1 Score=37.69 Aligned_cols=99 Identities=14% Similarity=-0.023 Sum_probs=60.0
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCcc-----ccccc-cccccccCCCEEEeCCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQ-----AKRKP-LSFRCQLLNNQLLRSPS 84 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~~-----~~~~~-~~~~~~~~~Dll~~g~P 84 (278)
..-+|||+-||.|..+.-+.+.+ ...+.++|+++..++.-+++....... .+... ........+|.++.-..
T Consensus 60 ~G~rVLdiG~G~G~~~~~~~~~~--~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~ 137 (236)
T 3orh_A 60 KGGRVLEVGFGMAIAASKVQEAP--IDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTY 137 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHTTSC--EEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCC
T ss_pred CCCeEEEECCCccHHHHHHHHhC--CcEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEeee
Confidence 34699999999999998887776 367889999999999999887654321 11111 11122345788764322
Q ss_pred CCCCCcccccCCCCCCCCchHHHHhhhcCCcE
Q 023723 85 PLLGNDDMTVITKHDQPDDSWDKLLESCDPVE 116 (278)
Q Consensus 85 Cq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~~ 116 (278)
-.. ....... .....+.++.|.+||-=
T Consensus 138 ~~~----~~~~~~~-~~~~~~~e~~rvLkPGG 164 (236)
T 3orh_A 138 PLS----EETWHTH-QFNFIKNHAFRLLKPGG 164 (236)
T ss_dssp CCB----GGGTTTH-HHHHHHHTHHHHEEEEE
T ss_pred ecc----cchhhhc-chhhhhhhhhheeCCCC
Confidence 111 1111111 11234556788899953
No 248
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=85.95 E-value=1 Score=39.09 Aligned_cols=46 Identities=17% Similarity=0.265 Sum_probs=37.4
Q ss_pred CCCeEEeeecchhhHHHHHHhc-CCCceEEEEEcCCHHHHHHHHHHcCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFGH 58 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~a-G~~~~~v~a~e~~~~a~~~y~~N~~~ 58 (278)
..-+|||+-||.|.+...+... + ...|.++|+++.+++.-+.|...
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~--~~~v~gvDis~~~i~~A~~~~~~ 92 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWG--PSRMVGLDIDSRLIHSARQNIRH 92 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTC--CSEEEEEESCHHHHHHHHHTC--
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcC--CCEEEEECCCHHHHHHHHHHHHh
Confidence 3569999999999999888776 3 25789999999999998888654
No 249
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=85.70 E-value=2.2 Score=37.61 Aligned_cols=88 Identities=10% Similarity=0.022 Sum_probs=56.4
Q ss_pred CCCeEEeeecchhhHHHH-HHh-cCCCceEEEEEcCCHHHHHHHHHHcCCCCc------cccccccccccccCCCEEEeC
Q 023723 11 EAWRVLEFYSGIGGMRYS-LMK-ADVSAQVVEAFDINDKANDVYELNFGHRPY------QAKRKPLSFRCQLLNNQLLRS 82 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~g-l~~-aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~------~~~~~~~~~~~~~~~Dll~~g 82 (278)
..-+|||+=||.|+++.- +.+ .| -.|.++|+++.+++.-++|...... ..+...+ ....+|+++..
T Consensus 122 ~g~rVLDIGcG~G~~ta~~lA~~~g---a~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l---~d~~FDvV~~~ 195 (298)
T 3fpf_A 122 RGERAVFIGGGPLPLTGILLSHVYG---MRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVI---DGLEFDVLMVA 195 (298)
T ss_dssp TTCEEEEECCCSSCHHHHHHHHTTC---CEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGG---GGCCCSEEEEC
T ss_pred CcCEEEEECCCccHHHHHHHHHccC---CEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhC---CCCCcCEEEEC
Confidence 457999999999887633 332 46 3689999999999988888642211 2222222 23579999752
Q ss_pred CCCCCCCcccccCCCCCCCCchHHHHhhhcCCcEE
Q 023723 83 PSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVER 117 (278)
Q Consensus 83 ~PCq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~~~ 117 (278)
.- . ......+.++.+.++|--.
T Consensus 196 a~------------~-~d~~~~l~el~r~LkPGG~ 217 (298)
T 3fpf_A 196 AL------------A-EPKRRVFRNIHRYVDTETR 217 (298)
T ss_dssp TT------------C-SCHHHHHHHHHHHCCTTCE
T ss_pred CC------------c-cCHHHHHHHHHHHcCCCcE
Confidence 21 1 2233577778888999533
No 250
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=85.70 E-value=1.1 Score=40.04 Aligned_cols=45 Identities=22% Similarity=0.289 Sum_probs=38.6
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG 57 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~ 57 (278)
.-+|||+-||.|++...+.+.. +...|.++|+++.+++.-+.|++
T Consensus 121 ~~~VLdIG~G~G~~a~~la~~~-~~~~V~~VDis~~~l~~Ar~~~~ 165 (334)
T 1xj5_A 121 PKKVLVIGGGDGGVLREVARHA-SIEQIDMCEIDKMVVDVSKQFFP 165 (334)
T ss_dssp CCEEEEETCSSSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCH
T ss_pred CCEEEEECCCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHH
Confidence 4689999999999999887763 14688999999999999999885
No 251
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=85.69 E-value=1.3 Score=36.56 Aligned_cols=39 Identities=18% Similarity=0.092 Sum_probs=29.5
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHH
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKAND 50 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~ 50 (278)
..-+|||+-||.|..+.-+....- -..|.++|+++.+++
T Consensus 57 ~g~~VLDlGcGtG~~~~~la~~~~-~~~V~gvD~s~~~l~ 95 (210)
T 1nt2_A 57 GDERVLYLGAASGTTVSHLADIVD-EGIIYAVEYSAKPFE 95 (210)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHTT-TSEEEEECCCHHHHH
T ss_pred CCCEEEEECCcCCHHHHHHHHHcC-CCEEEEEECCHHHHH
Confidence 346899999999998877665421 137899999998654
No 252
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=85.48 E-value=0.66 Score=37.97 Aligned_cols=41 Identities=20% Similarity=0.246 Sum_probs=32.9
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHH
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVY 52 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y 52 (278)
...+|||+.||.|.+...+...+- ...|.++|+++.+++..
T Consensus 27 ~~~~vLDiGcG~G~~~~~la~~~p-~~~v~gvD~s~~~l~~~ 67 (218)
T 3mq2_A 27 YDDVVLDVGTGDGKHPYKVARQNP-SRLVVALDADKSRMEKI 67 (218)
T ss_dssp SSEEEEEESCTTCHHHHHHHHHCT-TEEEEEEESCGGGGHHH
T ss_pred CCCEEEEecCCCCHHHHHHHHHCC-CCEEEEEECCHHHHHHH
Confidence 356899999999999998888731 25789999999866654
No 253
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=85.14 E-value=1.1 Score=40.02 Aligned_cols=97 Identities=11% Similarity=0.077 Sum_probs=59.9
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCc-------cccccccccccccCCCEEEeCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-------QAKRKPLSFRCQLLNNQLLRSP 83 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~-------~~~~~~~~~~~~~~~Dll~~g~ 83 (278)
..-+|+|+-||.|.+...+.+..- --.+.++|+ +..++.-+.|...... ..+... ...++.|+++...
T Consensus 190 ~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~---~~~~~~D~v~~~~ 264 (359)
T 1x19_A 190 GVKKMIDVGGGIGDISAAMLKHFP-ELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYK---ESYPEADAVLFCR 264 (359)
T ss_dssp TCCEEEEESCTTCHHHHHHHHHCT-TCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTT---SCCCCCSEEEEES
T ss_pred CCCEEEEECCcccHHHHHHHHHCC-CCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCcccc---CCCCCCCEEEEec
Confidence 356999999999999998887632 125678999 8888887777532211 122111 1234459998854
Q ss_pred CCCCCCcccccCCCCCCCCchHHHHhhhcCC--cEEEEE
Q 023723 84 SPLLGNDDMTVITKHDQPDDSWDKLLESCDP--VERFLE 120 (278)
Q Consensus 84 PCq~fS~ag~~~g~~d~r~~l~~~~i~~~~P--~~~i~E 120 (278)
....++. +....++.++.+.++| +++++|
T Consensus 265 vlh~~~d--------~~~~~~l~~~~~~L~pgG~l~i~e 295 (359)
T 1x19_A 265 ILYSANE--------QLSTIMCKKAFDAMRSGGRLLILD 295 (359)
T ss_dssp CGGGSCH--------HHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred hhccCCH--------HHHHHHHHHHHHhcCCCCEEEEEe
Confidence 4333211 1123455566777888 466778
No 254
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=84.25 E-value=1.7 Score=38.71 Aligned_cols=72 Identities=7% Similarity=0.021 Sum_probs=50.1
Q ss_pred CCCCeEEeeecchhhHHHHHHhc--CCCceEEEEEcCCHHHHHHHHHHcCCCC------ccccccc-cccccccCCCEEE
Q 023723 10 GEAWRVLEFYSGIGGMRYSLMKA--DVSAQVVEAFDINDKANDVYELNFGHRP------YQAKRKP-LSFRCQLLNNQLL 80 (278)
Q Consensus 10 ~~~~~v~dLFsG~Gg~~~gl~~a--G~~~~~v~a~e~~~~a~~~y~~N~~~~~------~~~~~~~-~~~~~~~~~Dll~ 80 (278)
.++++||+|-+|.|++..-+.+. + . .|.++|+|+..++.-+.+++... +..|... +.......+|+|+
T Consensus 88 p~~~rVLdIG~G~G~la~~la~~~p~--~-~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi 164 (317)
T 3gjy_A 88 ASKLRITHLGGGACTMARYFADVYPQ--S-RNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVII 164 (317)
T ss_dssp GGGCEEEEESCGGGHHHHHHHHHSTT--C-EEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEE
T ss_pred CCCCEEEEEECCcCHHHHHHHHHCCC--c-EEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEE
Confidence 34579999999999999888773 4 3 57889999999999999997531 1122111 1111234699999
Q ss_pred eCCC
Q 023723 81 RSPS 84 (278)
Q Consensus 81 ~g~P 84 (278)
...+
T Consensus 165 ~D~~ 168 (317)
T 3gjy_A 165 RDVF 168 (317)
T ss_dssp ECCS
T ss_pred ECCC
Confidence 8654
No 255
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=84.11 E-value=1.5 Score=40.84 Aligned_cols=93 Identities=11% Similarity=0.049 Sum_probs=57.7
Q ss_pred CCCeEEeeecchhhHHHHHHhc-CCCceEEEEEcCCHHHHHHH-------HHHcCC-------CCc--ccccccccc--c
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVY-------ELNFGH-------RPY--QAKRKPLSF--R 71 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~a-G~~~~~v~a~e~~~~a~~~y-------~~N~~~-------~~~--~~~~~~~~~--~ 71 (278)
..-+|||+.||.|.+.+.+... | ...|+++|+++.+++.- +.|... ..+ .++...... .
T Consensus 242 ~g~~VLDLGCGsG~la~~LA~~~g--~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~~~~~ 319 (433)
T 1u2z_A 242 KGDTFMDLGSGVGNCVVQAALECG--CALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRVAE 319 (433)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHC--CSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHHHHH
T ss_pred CCCEEEEeCCCcCHHHHHHHHHCC--CCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCcccccccccc
Confidence 3568999999999999888764 5 35799999999987766 666421 111 122111000 1
Q ss_pred cccCCCEEEeCCCCCCCCcccccCCCCCCCCchHHHHhhhcCCcE
Q 023723 72 CQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVE 116 (278)
Q Consensus 72 ~~~~~Dll~~g~PCq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~~ 116 (278)
....+|+|+.+..+ |. ......+.++.+.++|--
T Consensus 320 ~~~~FDvIvvn~~l--~~---------~d~~~~L~el~r~LKpGG 353 (433)
T 1u2z_A 320 LIPQCDVILVNNFL--FD---------EDLNKKVEKILQTAKVGC 353 (433)
T ss_dssp HGGGCSEEEECCTT--CC---------HHHHHHHHHHHTTCCTTC
T ss_pred ccCCCCEEEEeCcc--cc---------ccHHHHHHHHHHhCCCCe
Confidence 13579999976543 21 111234567777889853
No 256
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=84.09 E-value=1.7 Score=36.22 Aligned_cols=46 Identities=17% Similarity=0.031 Sum_probs=36.6
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG 57 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~ 57 (278)
.-+|||+.||.|..+..+..+--+-..|.++|+++.+.+.-+.|+.
T Consensus 73 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~ 118 (232)
T 3cbg_A 73 AKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQ 118 (232)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHH
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH
Confidence 4589999999999998887752101378999999999988888863
No 257
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=84.03 E-value=1.3 Score=38.05 Aligned_cols=96 Identities=17% Similarity=0.108 Sum_probs=60.5
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCcccc--ccc-cccccccCCCEEEeC--CCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQAK--RKP-LSFRCQLLNNQLLRS--PSP 85 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~~~~--~~~-~~~~~~~~~Dll~~g--~PC 85 (278)
..-+|+||=||.|-+++.+. + -..+.++|||+.+++..+.|......... ..+ ........+|+++.. -||
T Consensus 105 ~p~~VLDlGCG~gpLal~~~--~--~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~~~~~DvvLllk~lh~ 180 (253)
T 3frh_A 105 TPRRVLDIACGLNPLALYER--G--IASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPPAEAGDLALIFKLLPL 180 (253)
T ss_dssp CCSEEEEETCTTTHHHHHHT--T--CSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCCCCBCSEEEEESCHHH
T ss_pred CCCeEEEecCCccHHHHHhc--c--CCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCCCCCcchHHHHHHHHH
Confidence 35699999999999999988 3 36899999999999999998532211110 000 011112356666543 222
Q ss_pred CCCCcccccCCCCC-CCCchHHHHhhhcCCcEEEEEeC
Q 023723 86 LLGNDDMTVITKHD-QPDDSWDKLLESCDPVERFLEFS 122 (278)
Q Consensus 86 q~fS~ag~~~g~~d-~r~~l~~~~i~~~~P~~~i~Ev~ 122 (278)
+++ .++.+| .+++.++|..+++=|+
T Consensus 181 -----------LE~q~~~~~~-~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 181 -----------LEREQAGSAM-ALLQSLNTPRMAVSFP 206 (253)
T ss_dssp -----------HHHHSTTHHH-HHHHHCBCSEEEEEEE
T ss_pred -----------hhhhchhhHH-HHHHHhcCCCEEEEcC
Confidence 222 334444 7888888877777643
No 258
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=83.85 E-value=1.3 Score=36.50 Aligned_cols=97 Identities=10% Similarity=0.093 Sum_probs=58.7
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCC----C-ccccccccccccccCCCEEEeCCCCC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHR----P-YQAKRKPLSFRCQLLNNQLLRSPSPL 86 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~----~-~~~~~~~~~~~~~~~~Dll~~g~PCq 86 (278)
.-+|||+.||.|.+...+... ..+.++|+++.+++.-+.|.... . ...+...... ...+|+++....+-
T Consensus 34 ~~~vLdiG~G~G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~--~~~fD~v~~~~~~~ 107 (243)
T 3d2l_A 34 GKRIADIGCGTGTATLLLADH----YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELEL--PEPVDAITILCDSL 107 (243)
T ss_dssp TCEEEEESCTTCHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCC--SSCEEEEEECTTGG
T ss_pred CCeEEEecCCCCHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcCC--CCCcCEEEEeCCch
Confidence 368999999999998888766 37889999999998888876321 1 1222221111 14689998754211
Q ss_pred CCCcccccCCCCCCCCchHHHHhhhcCCc-EEEEE
Q 023723 87 LGNDDMTVITKHDQPDDSWDKLLESCDPV-ERFLE 120 (278)
Q Consensus 87 ~fS~ag~~~g~~d~r~~l~~~~i~~~~P~-~~i~E 120 (278)
.+ -... +....++.++.+.++|. .++++
T Consensus 108 ~~-----~~~~-~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 108 NY-----LQTE-ADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp GG-----CCSH-HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hh-----cCCH-HHHHHHHHHHHHhcCCCeEEEEE
Confidence 11 0000 11123455566778885 45566
No 259
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=83.80 E-value=2.8 Score=37.44 Aligned_cols=98 Identities=8% Similarity=-0.069 Sum_probs=63.3
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCccc-------cccccccccc-cCCCEEEeC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQA-------KRKPLSFRCQ-LLNNQLLRS 82 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~~~-------~~~~~~~~~~-~~~Dll~~g 82 (278)
..-+|+|+-||.|.+...+.+..- --.+.++|+ +..++.-+.+.......+ +....+ ... ..+|+++..
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~p~~~D~v~~~ 255 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNK-EVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRD-VPFPTGFDAVWMS 255 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHST-TCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSS-CCCCCCCSEEEEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCC-CCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccC-CCCCCCcCEEEEe
Confidence 346999999999999999877532 236788999 988888888876543221 111110 012 368988876
Q ss_pred CCCCCCCcccccCCCCCC-CCchHHHHhhhcCC--cEEEEE
Q 023723 83 PSPLLGNDDMTVITKHDQ-PDDSWDKLLESCDP--VERFLE 120 (278)
Q Consensus 83 ~PCq~fS~ag~~~g~~d~-r~~l~~~~i~~~~P--~~~i~E 120 (278)
.-...++ |+ ...++.++.+.++| +++++|
T Consensus 256 ~vlh~~~---------~~~~~~~l~~~~~~L~pgG~l~i~e 287 (363)
T 3dp7_A 256 QFLDCFS---------EEEVISILTRVAQSIGKDSKVYIME 287 (363)
T ss_dssp SCSTTSC---------HHHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred chhhhCC---------HHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 5443332 22 12455667777899 577788
No 260
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=82.45 E-value=0.78 Score=39.53 Aligned_cols=44 Identities=20% Similarity=0.106 Sum_probs=37.6
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH 58 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~ 58 (278)
.-+||++.+|.|++...+.+.+ ..|.++|+|+..++.-+.+++.
T Consensus 73 ~~~VL~iG~G~G~~~~~ll~~~---~~v~~veid~~~i~~ar~~~~~ 116 (262)
T 2cmg_A 73 LKEVLIVDGFDLELAHQLFKYD---THIDFVQADEKILDSFISFFPH 116 (262)
T ss_dssp CCEEEEESSCCHHHHHHHTTSS---CEEEEECSCHHHHGGGTTTSTT
T ss_pred CCEEEEEeCCcCHHHHHHHhCC---CEEEEEECCHHHHHHHHHHHHh
Confidence 4689999999999998777664 5889999999999988888764
No 261
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=80.49 E-value=1 Score=35.99 Aligned_cols=36 Identities=17% Similarity=0.188 Sum_probs=28.1
Q ss_pred CCeEEeeecchhhHHHHHHhc-CCC-------ceEEEEEcCCHH
Q 023723 12 AWRVLEFYSGIGGMRYSLMKA-DVS-------AQVVEAFDINDK 47 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~a-G~~-------~~~v~a~e~~~~ 47 (278)
.-+|||+.||.|+++..+.+. |-. -..|.++|+++.
T Consensus 23 ~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~ 66 (196)
T 2nyu_A 23 GLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHI 66 (196)
T ss_dssp TCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCC
T ss_pred CCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhc
Confidence 468999999999999888765 410 037899999984
No 262
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=80.37 E-value=2.3 Score=35.93 Aligned_cols=39 Identities=8% Similarity=0.067 Sum_probs=29.2
Q ss_pred CCCeEEeeecchhhHHHHHHhc-CCCceEEEEEcCCHHHHH
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKAND 50 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~a-G~~~~~v~a~e~~~~a~~ 50 (278)
...+|||+.||.|+.+.-+... |- --.|+|+|+++...+
T Consensus 76 ~g~~VLDlG~GtG~~t~~la~~v~~-~G~V~avD~s~~~l~ 115 (232)
T 3id6_C 76 KGTKVLYLGAASGTTISHVSDIIEL-NGKAYGVEFSPRVVR 115 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHTT-TSEEEEEECCHHHHH
T ss_pred CCCEEEEEeecCCHHHHHHHHHhCC-CCEEEEEECcHHHHH
Confidence 3579999999999988766542 31 127899999997643
No 263
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=80.23 E-value=1.2 Score=35.83 Aligned_cols=36 Identities=8% Similarity=-0.004 Sum_probs=27.7
Q ss_pred CCeEEeeecchhhHHHHHHhcCCC-ceEEEEEcCCHH
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVS-AQVVEAFDINDK 47 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~-~~~v~a~e~~~~ 47 (278)
..+|||+.||.|+++..+.+..-+ ...|.++|+++.
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~ 59 (201)
T 2plw_A 23 NKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIM 59 (201)
T ss_dssp TEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCC
T ss_pred CCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCcc
Confidence 468999999999999888654210 147899999984
No 264
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=78.89 E-value=1.8 Score=35.38 Aligned_cols=90 Identities=11% Similarity=0.055 Sum_probs=55.4
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCccccccccccccccCCCEEEeCCCCCCCCcc
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQAKRKPLSFRCQLLNNQLLRSPSPLLGNDD 91 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~~~~~~~~~~~~~~~~Dll~~g~PCq~fS~a 91 (278)
.-+|||+-||.|.+...+... .++|+++.+++..+.+ .-.....+..... .....+|+++....-..
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~-------~~vD~s~~~~~~a~~~-~~~~~~~d~~~~~-~~~~~fD~v~~~~~l~~---- 114 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK-------IGVEPSERMAEIARKR-GVFVLKGTAENLP-LKDESFDFALMVTTICF---- 114 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC-------EEEESCHHHHHHHHHT-TCEEEECBTTBCC-SCTTCEEEEEEESCGGG----
T ss_pred CCcEEEeCCCCCHHHHHHHHH-------hccCCCHHHHHHHHhc-CCEEEEcccccCC-CCCCCeeEEEEcchHhh----
Confidence 568999999999998876433 8999999999998887 1111222222221 12246899987643211
Q ss_pred cccCCCCCCCCchHHHHhhhcCCc-EEEEE
Q 023723 92 MTVITKHDQPDDSWDKLLESCDPV-ERFLE 120 (278)
Q Consensus 92 g~~~g~~d~r~~l~~~~i~~~~P~-~~i~E 120 (278)
..| ...++.++.+.++|. .+++.
T Consensus 115 -----~~~-~~~~l~~~~~~L~pgG~l~i~ 138 (219)
T 1vlm_A 115 -----VDD-PERALKEAYRILKKGGYLIVG 138 (219)
T ss_dssp -----SSC-HHHHHHHHHHHEEEEEEEEEE
T ss_pred -----ccC-HHHHHHHHHHHcCCCcEEEEE
Confidence 112 124556677778885 34444
No 265
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=78.72 E-value=0.59 Score=39.60 Aligned_cols=96 Identities=14% Similarity=-0.002 Sum_probs=57.4
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCc-------cccccc-cccc----cccCCCEE
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-------QAKRKP-LSFR----CQLLNNQL 79 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~-------~~~~~~-~~~~----~~~~~Dll 79 (278)
.-+|||+.||.|..++.+..+--+--.|.++|+++.+.+.-+.|+..... ..+... +... ....+|++
T Consensus 61 ~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~V 140 (242)
T 3r3h_A 61 AKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDFI 140 (242)
T ss_dssp CSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEEE
T ss_pred cCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeEE
Confidence 45899999999999998877411013789999999877666666532211 222111 1111 02579999
Q ss_pred EeCCCCCCCCcccccCCCCCCCCchHHHHhhhcCCc-EEEEE
Q 023723 80 LRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPV-ERFLE 120 (278)
Q Consensus 80 ~~g~PCq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~-~~i~E 120 (278)
+...++. .....+.++.+.++|. ++++.
T Consensus 141 ~~d~~~~-------------~~~~~l~~~~~~LkpGG~lv~d 169 (242)
T 3r3h_A 141 FIDADKT-------------NYLNYYELALKLVTPKGLIAID 169 (242)
T ss_dssp EEESCGG-------------GHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEcCChH-------------HhHHHHHHHHHhcCCCeEEEEE
Confidence 8764411 1112444566778995 55555
No 266
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=78.35 E-value=1.6 Score=43.12 Aligned_cols=74 Identities=11% Similarity=0.024 Sum_probs=45.2
Q ss_pred CCCeEEeeecchhhHHHH-H---HhcC--------CCceEEEEEcCCHHHHHHHHHH----cCCCC--cccccccccc--
Q 023723 11 EAWRVLEFYSGIGGMRYS-L---MKAD--------VSAQVVEAFDINDKANDVYELN----FGHRP--YQAKRKPLSF-- 70 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~g-l---~~aG--------~~~~~v~a~e~~~~a~~~y~~N----~~~~~--~~~~~~~~~~-- 70 (278)
+...|+|+=||.|-+++- + +.|| +.-..|+|+|.++.|..+.+.. +.+.. +..+..++..
T Consensus 409 ~~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~ 488 (745)
T 3ua3_A 409 KTVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIA 488 (745)
T ss_dssp SEEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHH
T ss_pred CCcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhccccc
Confidence 356899999999999753 2 2233 0124889999999998776653 22322 2333222221
Q ss_pred --ccccCCCEEEeCCC
Q 023723 71 --RCQLLNNQLLRSPS 84 (278)
Q Consensus 71 --~~~~~~Dll~~g~P 84 (278)
....++|||+.-.-
T Consensus 489 ~~~~~ekVDIIVSElm 504 (745)
T 3ua3_A 489 KDRGFEQPDIIVSELL 504 (745)
T ss_dssp HHTTCCCCSEEEECCC
T ss_pred ccCCCCcccEEEEecc
Confidence 11358999987543
No 267
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=78.14 E-value=2.3 Score=35.90 Aligned_cols=46 Identities=17% Similarity=0.121 Sum_probs=34.7
Q ss_pred CCCeEEeeecchhhHHHHHHhc-CCCceEEEEEcCCHH------HHHHHHHHcC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDK------ANDVYELNFG 57 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~a-G~~~~~v~a~e~~~~------a~~~y~~N~~ 57 (278)
...+|||+-||.|.+..-+... |. -..|.++|+++. .++.-+.++.
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~~g~-~~~v~gvD~s~~~~~~~~~~~~a~~~~~ 95 (275)
T 3bkx_A 43 PGEKILEIGCGQGDLSAVLADQVGS-SGHVTGIDIASPDYGAPLTLGQAWNHLL 95 (275)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCT-TCEEEEECSSCTTCCSSSCHHHHHHHHH
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCC-CCEEEEEECCccccccHHHHHHHHHHHH
Confidence 3469999999999999888766 42 147899999986 6666666653
No 268
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=77.52 E-value=1.9 Score=42.14 Aligned_cols=46 Identities=17% Similarity=0.137 Sum_probs=31.6
Q ss_pred CCCCCeEEeeecchhhHHHHHHhcCCC--ce-EEEEEcCCHHHHHHHHH
Q 023723 9 DGEAWRVLEFYSGIGGMRYSLMKADVS--AQ-VVEAFDINDKANDVYEL 54 (278)
Q Consensus 9 ~~~~~~v~dLFsG~Gg~~~gl~~aG~~--~~-~v~a~e~~~~a~~~y~~ 54 (278)
..+...|+|+=||.|-+....-+||-. .+ .|+|||.++.|..+.+.
T Consensus 355 ~~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A~~a~~~ 403 (637)
T 4gqb_A 355 DTNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAVVTLEN 403 (637)
T ss_dssp TTCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHHHHHHHH
T ss_pred cCCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHH
Confidence 344568999999999986544444310 12 48999999998766543
No 269
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=77.18 E-value=1.3 Score=35.11 Aligned_cols=36 Identities=22% Similarity=0.103 Sum_probs=30.5
Q ss_pred CCeEEeeecchh-hHHHHHHh-cCCCceEEEEEcCCHHHHH
Q 023723 12 AWRVLEFYSGIG-GMRYSLMK-ADVSAQVVEAFDINDKAND 50 (278)
Q Consensus 12 ~~~v~dLFsG~G-g~~~gl~~-aG~~~~~v~a~e~~~~a~~ 50 (278)
.-+++|+=+|-| -.+.-|.+ .|+ .|.|+|+++.|+.
T Consensus 36 ~~rVlEVG~G~g~~vA~~La~~~g~---~V~atDInp~Av~ 73 (153)
T 2k4m_A 36 GTRVVEVGAGRFLYVSDYIRKHSKV---DLVLTDIKPSHGG 73 (153)
T ss_dssp SSEEEEETCTTCCHHHHHHHHHSCC---EEEEECSSCSSTT
T ss_pred CCcEEEEccCCChHHHHHHHHhCCC---eEEEEECCccccc
Confidence 469999999999 58888886 893 4788999999987
No 270
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=76.61 E-value=6.5 Score=35.09 Aligned_cols=98 Identities=8% Similarity=-0.034 Sum_probs=61.6
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCcccc----cccccccccc-CCCEEEeCCCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQAK----RKPLSFRCQL-LNNQLLRSPSP 85 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~~~~----~~~~~~~~~~-~~Dll~~g~PC 85 (278)
...+|+|+-||.|.+...+.+..-. -.+.++|+ +..++.-+.++......+. ..+.. ...+ .+|+++...-.
T Consensus 202 ~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~-~~~p~~~D~v~~~~vl 278 (369)
T 3gwz_A 202 GAATAVDIGGGRGSLMAAVLDAFPG-LRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFF-ETIPDGADVYLIKHVL 278 (369)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTT-CEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-TCCCSSCSEEEEESCG
T ss_pred cCcEEEEeCCCccHHHHHHHHHCCC-CeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCC-CCCCCCceEEEhhhhh
Confidence 3579999999999999998877422 25688999 8888888877643221111 00111 1122 68999876544
Q ss_pred CCCCcccccCCCCCCC-CchHHHHhhhcCC--cEEEEE
Q 023723 86 LLGNDDMTVITKHDQP-DDSWDKLLESCDP--VERFLE 120 (278)
Q Consensus 86 q~fS~ag~~~g~~d~r-~~l~~~~i~~~~P--~~~i~E 120 (278)
..| .|+. ..++.++.+.++| ++++.|
T Consensus 279 h~~---------~d~~~~~~L~~~~~~L~pgG~l~i~e 307 (369)
T 3gwz_A 279 HDW---------DDDDVVRILRRIATAMKPDSRLLVID 307 (369)
T ss_dssp GGS---------CHHHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred ccC---------CHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 332 2222 2456667777888 577778
No 271
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=76.47 E-value=0.95 Score=39.09 Aligned_cols=32 Identities=22% Similarity=0.219 Sum_probs=26.9
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHH
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDK 47 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~ 47 (278)
..+||||.||.|+++..+.+.+ .|.++|+++.
T Consensus 75 g~~VLDlGcGtG~~s~~la~~~----~V~gvD~s~m 106 (265)
T 2oxt_A 75 TGRVVDLGCGRGGWSYYAASRP----HVMDVRAYTL 106 (265)
T ss_dssp CEEEEEESCTTSHHHHHHHTST----TEEEEEEECC
T ss_pred CCEEEEeCcCCCHHHHHHHHcC----cEEEEECchh
Confidence 4689999999999998887664 5788999874
No 272
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=76.09 E-value=3.6 Score=36.00 Aligned_cols=69 Identities=12% Similarity=-0.031 Sum_probs=48.1
Q ss_pred CeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCC---cccccccc----ccccccCCCEEEeCCCC
Q 023723 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP---YQAKRKPL----SFRCQLLNNQLLRSPSP 85 (278)
Q Consensus 13 ~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~---~~~~~~~~----~~~~~~~~Dll~~g~PC 85 (278)
-.++|.-+|.||-+..+-..+ -.|+++|.|+.|++.-+. ..... +.++...+ .......+|.++..+..
T Consensus 24 g~~VD~T~G~GGHS~~il~~~---g~VigiD~Dp~Ai~~A~~-L~~~rv~lv~~~f~~l~~~L~~~g~~~vDgIL~DLGv 99 (285)
T 1wg8_A 24 GVYVDATLGGAGHARGILERG---GRVIGLDQDPEAVARAKG-LHLPGLTVVQGNFRHLKRHLAALGVERVDGILADLGV 99 (285)
T ss_dssp CEEEETTCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHH-TCCTTEEEEESCGGGHHHHHHHTTCSCEEEEEEECSC
T ss_pred CEEEEeCCCCcHHHHHHHHCC---CEEEEEeCCHHHHHHHHh-hccCCEEEEECCcchHHHHHHHcCCCCcCEEEeCCcc
Confidence 479999999999999998875 278999999999998887 64411 22221111 11223568999986554
No 273
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=74.71 E-value=1.1 Score=38.93 Aligned_cols=32 Identities=16% Similarity=0.132 Sum_probs=26.8
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHH
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDK 47 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~ 47 (278)
..+||||.||.|+++..+.+.+ .|.++|+++.
T Consensus 83 g~~VLDlGcGtG~~s~~la~~~----~V~gVD~s~m 114 (276)
T 2wa2_A 83 KGTVVDLGCGRGSWSYYAASQP----NVREVKAYTL 114 (276)
T ss_dssp CEEEEEESCTTCHHHHHHHTST----TEEEEEEECC
T ss_pred CCEEEEeccCCCHHHHHHHHcC----CEEEEECchh
Confidence 4689999999999998887764 5788999874
No 274
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=73.53 E-value=2.2 Score=36.51 Aligned_cols=45 Identities=7% Similarity=-0.043 Sum_probs=33.7
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG 57 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~ 57 (278)
...+|||+-||.|....-+...+ ...|.++|+++.+++..+.+..
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~~--~~~v~gvD~s~~~l~~a~~~~~ 115 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACSH--FEDITMTDFLEVNRQELGRWLQ 115 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGGG--CSEEEEECSCHHHHHHHHHHHT
T ss_pred CCCeEEEECCCcChHHHHhhccC--CCeEEEeCCCHHHHHHHHHHHh
Confidence 45799999999999543333322 2578999999999988887654
No 275
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=72.75 E-value=6.1 Score=35.59 Aligned_cols=45 Identities=16% Similarity=0.291 Sum_probs=37.7
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHc
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNF 56 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~ 56 (278)
..-+|||+..|.|.++..|...+- ...|.|+|+|+.-+..++..+
T Consensus 58 ~~~~VlEIGPG~G~LT~~Ll~~~~-~~~vvavE~D~~l~~~L~~~~ 102 (353)
T 1i4w_A 58 EELKVLDLYPGVGIQSAIFYNKYC-PRQYSLLEKRSSLYKFLNAKF 102 (353)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHC-CSEEEEECCCHHHHHHHHHHT
T ss_pred CCCEEEEECCCCCHHHHHHHhhCC-CCEEEEEecCHHHHHHHHHhc
Confidence 457899999999999999987521 246899999999999998876
No 276
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=71.93 E-value=3.9 Score=35.60 Aligned_cols=98 Identities=9% Similarity=-0.033 Sum_probs=60.1
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCc-------cccccccccccccCCCEEEeCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-------QAKRKPLSFRCQLLNNQLLRSP 83 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~-------~~~~~~~~~~~~~~~Dll~~g~ 83 (278)
...+|+|+-||.|.+...+.+..- .-.+.++|++ .+++.-+.+...... ..+..... . ...+|+++...
T Consensus 165 ~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~-~~~~D~v~~~~ 240 (335)
T 2r3s_A 165 EPLKVLDISASHGLFGIAVAQHNP-NAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVD-Y-GNDYDLVLLPN 240 (335)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHCT-TCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSC-C-CSCEEEEEEES
T ss_pred CCCEEEEECCCcCHHHHHHHHHCC-CCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCC-C-CCCCcEEEEcc
Confidence 457999999999999988877621 1367889999 888877777532111 12211111 1 12389999865
Q ss_pred CCCCCCcccccCCCCCCCCchHHHHhhhcCC--cEEEEE
Q 023723 84 SPLLGNDDMTVITKHDQPDDSWDKLLESCDP--VERFLE 120 (278)
Q Consensus 84 PCq~fS~ag~~~g~~d~r~~l~~~~i~~~~P--~~~i~E 120 (278)
.-..++. +....++.++.+.++| +++++|
T Consensus 241 ~l~~~~~--------~~~~~~l~~~~~~L~pgG~l~i~e 271 (335)
T 2r3s_A 241 FLHHFDV--------ATCEQLLRKIKTALAVEGKVIVFD 271 (335)
T ss_dssp CGGGSCH--------HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhccCCH--------HHHHHHHHHHHHhCCCCcEEEEEe
Confidence 4333311 1122455566777888 467777
No 277
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=71.26 E-value=6.7 Score=34.74 Aligned_cols=97 Identities=13% Similarity=0.034 Sum_probs=60.1
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCc-------cccccccccccccCCCEEEeCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-------QAKRKPLSFRCQLLNNQLLRSP 83 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~-------~~~~~~~~~~~~~~~Dll~~g~ 83 (278)
...+|+|+-||.|.+...+....- --.+.++|+ +.+++.-+.|...... ..+.. +.. ...+|+++...
T Consensus 182 ~~~~vlDvG~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~--~~~-~~~~D~v~~~~ 256 (374)
T 1qzz_A 182 AVRHVLDVGGGNGGMLAAIALRAP-HLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFF--KPL-PVTADVVLLSF 256 (374)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT--SCC-SCCEEEEEEES
T ss_pred CCCEEEEECCCcCHHHHHHHHHCC-CCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCC--CcC-CCCCCEEEEec
Confidence 357999999999999998887642 136788999 9998888887643221 11111 111 12389888765
Q ss_pred CCCCCCcccccCCCCCCC-CchHHHHhhhcCCc--EEEEEe
Q 023723 84 SPLLGNDDMTVITKHDQP-DDSWDKLLESCDPV--ERFLEF 121 (278)
Q Consensus 84 PCq~fS~ag~~~g~~d~r-~~l~~~~i~~~~P~--~~i~Ev 121 (278)
....+ .|+. ..++.++.+.++|. +++.|.
T Consensus 257 vl~~~---------~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 257 VLLNW---------SDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp CGGGS---------CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cccCC---------CHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 43322 2221 24556677778884 556663
No 278
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=70.86 E-value=9 Score=33.39 Aligned_cols=97 Identities=13% Similarity=0.048 Sum_probs=60.0
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCcccc----cccccccccc-CCCEEEeCCCCC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQAK----RKPLSFRCQL-LNNQLLRSPSPL 86 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~~~~----~~~~~~~~~~-~~Dll~~g~PCq 86 (278)
..+|+|+=||.|.+...+.+..-. -.+.++|+ +..++.-+.++......+. ..+.. ...+ .+|+++...-..
T Consensus 170 ~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~p~~~D~v~~~~vlh 246 (332)
T 3i53_A 170 LGHVVDVGGGSGGLLSALLTAHED-LSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFF-DPLPAGAGGYVLSAVLH 246 (332)
T ss_dssp GSEEEEETCTTSHHHHHHHHHCTT-CEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-SCCCCSCSEEEEESCGG
T ss_pred CCEEEEeCCChhHHHHHHHHHCCC-CeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCC-CCCCCCCcEEEEehhhc
Confidence 469999999999999988775422 35677899 8888888777543221111 00110 1122 689988754332
Q ss_pred CCCcccccCCCCCC-CCchHHHHhhhcCC--cEEEEE
Q 023723 87 LGNDDMTVITKHDQ-PDDSWDKLLESCDP--VERFLE 120 (278)
Q Consensus 87 ~fS~ag~~~g~~d~-r~~l~~~~i~~~~P--~~~i~E 120 (278)
. ..|+ ...++.++.+.++| ++++.|
T Consensus 247 ~---------~~~~~~~~~l~~~~~~L~pgG~l~i~e 274 (332)
T 3i53_A 247 D---------WDDLSAVAILRRCAEAAGSGGVVLVIE 274 (332)
T ss_dssp G---------SCHHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred c---------CCHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 2 2232 23466667777899 577777
No 279
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=69.99 E-value=3.9 Score=33.96 Aligned_cols=38 Identities=16% Similarity=0.062 Sum_probs=28.6
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHH
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKAN 49 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~ 49 (278)
..-+|||+-||.|.+...+.+..- ...|.++|+++.+.
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~~~-~~~v~GvD~s~~~m 61 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAINDQ-NTFYIGIDPVKENL 61 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHTCT-TEEEEEECSCCGGG
T ss_pred CCCEEEEEeccCcHHHHHHHHhCC-CCEEEEEeCCHHHH
Confidence 345899999999999988874321 25789999995544
No 280
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=68.78 E-value=3.4 Score=36.15 Aligned_cols=95 Identities=11% Similarity=-0.045 Sum_probs=57.8
Q ss_pred CeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCC-----C--ccccccccccccccCCCEEEeCCCC
Q 023723 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHR-----P--YQAKRKPLSFRCQLLNNQLLRSPSP 85 (278)
Q Consensus 13 ~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~-----~--~~~~~~~~~~~~~~~~Dll~~g~PC 85 (278)
.+|+|+-||.|.+...+....- --.+.++|+ +..++.-+.++... . ...+... .. ...+|+++.....
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~~-~~~~D~v~~~~vl 243 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEP-SARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ--EV-PSNGDIYLLSRII 243 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCT-TCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT--CC-CSSCSEEEEESCG
T ss_pred CEEEEeCCCchHHHHHHHHHCC-CCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC--CC-CCCCCEEEEchhc
Confidence 6999999999999998877632 136788999 88777777665321 1 1222111 11 1358999865433
Q ss_pred CCCCcccccCCCCCCCCchHHHHhhhcCC--cEEEEE
Q 023723 86 LLGNDDMTVITKHDQPDDSWDKLLESCDP--VERFLE 120 (278)
Q Consensus 86 q~fS~ag~~~g~~d~r~~l~~~~i~~~~P--~~~i~E 120 (278)
..|+. +....++.++.+.++| ++++.|
T Consensus 244 ~~~~~--------~~~~~~l~~~~~~L~pgG~l~i~e 272 (334)
T 2ip2_A 244 GDLDE--------AASLRLLGNCREAMAGDGRVVVIE 272 (334)
T ss_dssp GGCCH--------HHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred cCCCH--------HHHHHHHHHHHHhcCCCCEEEEEE
Confidence 22211 1112455566777888 466777
No 281
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=68.62 E-value=6.3 Score=34.04 Aligned_cols=45 Identities=20% Similarity=0.187 Sum_probs=34.1
Q ss_pred CCCeEEeeecchhh----HHHHHHhc-CC---CceEEEEEcCCHHHHHHHHHHc
Q 023723 11 EAWRVLEFYSGIGG----MRYSLMKA-DV---SAQVVEAFDINDKANDVYELNF 56 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg----~~~gl~~a-G~---~~~~v~a~e~~~~a~~~y~~N~ 56 (278)
..++|+|+-||.|- +++-|... |. .+ .|.|+|+++.+.+.-++|.
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~-~I~atDis~~~L~~Ar~~~ 157 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRW-KVFASDIDTEVLEKARSGI 157 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSE-EEEEEESCHHHHHHHHHTE
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCe-EEEEEECCHHHHHHHHhcC
Confidence 35899999999998 44445443 31 13 6899999999999988874
No 282
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=68.59 E-value=2.4 Score=37.33 Aligned_cols=29 Identities=21% Similarity=0.205 Sum_probs=24.5
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDI 44 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~ 44 (278)
..+||||.||.|+++.-+.+.| .|.++|+
T Consensus 83 g~~VLDlGcG~G~~s~~la~~~----~V~gvD~ 111 (305)
T 2p41_A 83 EGKVVDLGCGRGGWSYYCGGLK----NVREVKG 111 (305)
T ss_dssp CEEEEEETCTTSHHHHHHHTST----TEEEEEE
T ss_pred CCEEEEEcCCCCHHHHHHHhcC----CEEEEec
Confidence 4699999999999998887775 4678888
No 283
>2dpm_A M.dpnii 1, protein (adenine-specific methyltransferase dpnii 1); DNA adenine methyltransferase, methylase; HET: SAM; 1.80A {Streptococcus pneumoniae} SCOP: c.66.1.28
Probab=68.48 E-value=3.6 Score=35.84 Aligned_cols=38 Identities=21% Similarity=0.261 Sum_probs=31.1
Q ss_pred CeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHH
Q 023723 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELN 55 (278)
Q Consensus 13 ~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N 55 (278)
-+.+|.|+|.|+..+.+.. +.++.+|+|++-+..|+.-
T Consensus 37 ~~yvEpF~GggaV~~~~~~-----~~~i~ND~n~~Lin~y~~i 74 (284)
T 2dpm_A 37 NRYFEPFVGGGALFFDLAP-----KDAVINDFNAELINCYQQI 74 (284)
T ss_dssp SCEEETTCTTCHHHHHHCC-----SEEEEEESCHHHHHHHHHH
T ss_pred CEEEeecCCccHHHHhhhc-----cceeeeecchHHHHHHHHH
Confidence 4799999999998776632 4788999999999998653
No 284
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=67.57 E-value=6.4 Score=34.73 Aligned_cols=96 Identities=13% Similarity=0.066 Sum_probs=58.9
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCc-------cccccccccccccCCCEEEeCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-------QAKRKPLSFRCQLLNNQLLRSP 83 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~-------~~~~~~~~~~~~~~~Dll~~g~ 83 (278)
...+|+|+.||.|.+...+...+-. -.+.++|+ +.+++.-+.|+..... ..+.. +.. ...+|+++...
T Consensus 183 ~~~~vLDvG~G~G~~~~~l~~~~~~-~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~--~~~-~~~~D~v~~~~ 257 (360)
T 1tw3_A 183 NVRHVLDVGGGKGGFAAAIARRAPH-VSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFF--EPL-PRKADAIILSF 257 (360)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTT-CEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTT--SCC-SSCEEEEEEES
T ss_pred cCcEEEEeCCcCcHHHHHHHHhCCC-CEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCC--CCC-CCCccEEEEcc
Confidence 3469999999999999988877532 35677898 8888877777532211 11111 111 12388888755
Q ss_pred CCCCCCcccccCCCCCCC-CchHHHHhhhcCC--cEEEEE
Q 023723 84 SPLLGNDDMTVITKHDQP-DDSWDKLLESCDP--VERFLE 120 (278)
Q Consensus 84 PCq~fS~ag~~~g~~d~r-~~l~~~~i~~~~P--~~~i~E 120 (278)
....+ .|+. ..++.++.+.++| ++++.|
T Consensus 258 vl~~~---------~~~~~~~~l~~~~~~L~pgG~l~i~e 288 (360)
T 1tw3_A 258 VLLNW---------PDHDAVRILTRCAEALEPGGRILIHE 288 (360)
T ss_dssp CGGGS---------CHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cccCC---------CHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 43222 2221 2455667777888 466677
No 285
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=67.24 E-value=15 Score=31.29 Aligned_cols=98 Identities=11% Similarity=0.008 Sum_probs=60.1
Q ss_pred CeEEeeecch---hhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCC----ccccccccc----------cccccC
Q 023723 13 WRVLEFYSGI---GGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP----YQAKRKPLS----------FRCQLL 75 (278)
Q Consensus 13 ~~v~dLFsG~---Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~----~~~~~~~~~----------~~~~~~ 75 (278)
-+|||+=||. |.+..-+.+..- --.|.++|+++..++.-+++..... +..+..... ..+...
T Consensus 79 ~~vLDlGcG~pt~G~~~~~~~~~~p-~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d~~~ 157 (274)
T 2qe6_A 79 SQFLDLGSGLPTVQNTHEVAQSVNP-DARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMIDFSR 157 (274)
T ss_dssp CEEEEETCCSCCSSCHHHHHHHHCT-TCEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHCCTTS
T ss_pred CEEEEECCCCCCCChHHHHHHHhCC-CCEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccCCCCC
Confidence 5899999999 988766655421 1367899999999988888874321 122221111 112235
Q ss_pred CCEEEeCCCCCCCCcccccCCCCC-CCCchHHHHhhhcCCc-EEEEE
Q 023723 76 NNQLLRSPSPLLGNDDMTVITKHD-QPDDSWDKLLESCDPV-ERFLE 120 (278)
Q Consensus 76 ~Dll~~g~PCq~fS~ag~~~g~~d-~r~~l~~~~i~~~~P~-~~i~E 120 (278)
+|+++...-.+-+ .| ....++.++.+.++|- ++++.
T Consensus 158 ~d~v~~~~vlh~~---------~d~~~~~~l~~~~~~L~pGG~l~i~ 195 (274)
T 2qe6_A 158 PAAIMLVGMLHYL---------SPDVVDRVVGAYRDALAPGSYLFMT 195 (274)
T ss_dssp CCEEEETTTGGGS---------CTTTHHHHHHHHHHHSCTTCEEEEE
T ss_pred CEEEEEechhhhC---------CcHHHHHHHHHHHHhCCCCcEEEEE
Confidence 7877766443322 22 2345777788889994 44444
No 286
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=66.50 E-value=3.8 Score=34.31 Aligned_cols=95 Identities=8% Similarity=-0.009 Sum_probs=53.9
Q ss_pred CCeEEeeecchhhHHHHHHhc----CCCceEEEEEcCCHHHHHHHHHHcCCCC-cccccccc---ccccccCCCEEEeCC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKA----DVSAQVVEAFDINDKANDVYELNFGHRP-YQAKRKPL---SFRCQLLNNQLLRSP 83 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~a----G~~~~~v~a~e~~~~a~~~y~~N~~~~~-~~~~~~~~---~~~~~~~~Dll~~g~ 83 (278)
.-+|||+-||.|+.+.-+.+. +- -..|.++|+++.+++.-+...++.. +..+.... .......+|+++...
T Consensus 82 ~~~VLDiG~GtG~~t~~la~~~~~~~~-~~~V~gvD~s~~~l~~a~~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d~ 160 (236)
T 2bm8_A 82 PRTIVELGVYNGGSLAWFRDLTKIMGI-DCQVIGIDRDLSRCQIPASDMENITLHQGDCSDLTTFEHLREMAHPLIFIDN 160 (236)
T ss_dssp CSEEEEECCTTSHHHHHHHHHHHHTTC-CCEEEEEESCCTTCCCCGGGCTTEEEEECCSSCSGGGGGGSSSCSSEEEEES
T ss_pred CCEEEEEeCCCCHHHHHHHHhhhhcCC-CCEEEEEeCChHHHHHHhccCCceEEEECcchhHHHHHhhccCCCCEEEECC
Confidence 358999999999999887765 21 2478999999987554431111111 22232221 111222589887533
Q ss_pred CCCCCCcccccCCCCCCCCchHHHHhh-hcCCc-EEEEE
Q 023723 84 SPLLGNDDMTVITKHDQPDDSWDKLLE-SCDPV-ERFLE 120 (278)
Q Consensus 84 PCq~fS~ag~~~g~~d~r~~l~~~~i~-~~~P~-~~i~E 120 (278)
. . ......+.++.+ .++|. .++++
T Consensus 161 ~--------~-----~~~~~~l~~~~r~~LkpGG~lv~~ 186 (236)
T 2bm8_A 161 A--------H-----ANTFNIMKWAVDHLLEEGDYFIIE 186 (236)
T ss_dssp S--------C-----SSHHHHHHHHHHHTCCTTCEEEEC
T ss_pred c--------h-----HhHHHHHHHHHHhhCCCCCEEEEE
Confidence 2 1 011235555675 78884 55665
No 287
>2g1p_A DNA adenine methylase; DAM methylation, GATC recognition, base flipping, bacterial factor, transferase-DNA complex; HET: DNA SAH; 1.89A {Escherichia coli} PDB: 2ore_D*
Probab=62.22 E-value=4.5 Score=35.09 Aligned_cols=38 Identities=18% Similarity=0.164 Sum_probs=30.6
Q ss_pred CeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHH
Q 023723 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELN 55 (278)
Q Consensus 13 ~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N 55 (278)
-+.+|.|+|.|+..+.+. .+.++.+|+|++-+..|+.-
T Consensus 29 ~~yvEpF~Ggg~V~~~~~-----~~~~i~ND~n~~lin~y~~i 66 (278)
T 2g1p_A 29 ECLVEPFVGAGSVFLNTD-----FSRYILADINSDLISLYNIV 66 (278)
T ss_dssp SEEEETTCTTCHHHHTCC-----CSEEEEEESCHHHHHHHHHH
T ss_pred CeEEeeccCccHHHHhhc-----ccceEEEeccHHHHHHHHHH
Confidence 479999999998866542 25678999999999888764
No 288
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=61.77 E-value=8.4 Score=34.79 Aligned_cols=96 Identities=11% Similarity=-0.052 Sum_probs=62.0
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCc---c-ccccccccccccCCCEEEeCCCCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY---Q-AKRKPLSFRCQLLNNQLLRSPSPL 86 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~---~-~~~~~~~~~~~~~~Dll~~g~PCq 86 (278)
...+|||+-||.|.+...+...|. .|.++|+++...+.-+.+...... . ++...+. .....+|+++...--.
T Consensus 107 ~~~~VLDiGcG~G~~~~~l~~~g~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~l~-~~~~~fD~I~~~~vl~ 182 (416)
T 4e2x_A 107 PDPFIVEIGCNDGIMLRTIQEAGV---RHLGFEPSSGVAAKAREKGIRVRTDFFEKATADDVR-RTEGPANVIYAANTLC 182 (416)
T ss_dssp SSCEEEEETCTTTTTHHHHHHTTC---EEEEECCCHHHHHHHHTTTCCEECSCCSHHHHHHHH-HHHCCEEEEEEESCGG
T ss_pred CCCEEEEecCCCCHHHHHHHHcCC---cEEEECCCHHHHHHHHHcCCCcceeeechhhHhhcc-cCCCCEEEEEECChHH
Confidence 456999999999999999999883 678999999998887766211111 0 1111111 1235799999863322
Q ss_pred CCCcccccCCCCCCCCchHHHHhhhcCCc-EEEEE
Q 023723 87 LGNDDMTVITKHDQPDDSWDKLLESCDPV-ERFLE 120 (278)
Q Consensus 87 ~fS~ag~~~g~~d~r~~l~~~~i~~~~P~-~~i~E 120 (278)
. ..| ...++.++.+.++|. +++++
T Consensus 183 h---------~~d-~~~~l~~~~r~LkpgG~l~i~ 207 (416)
T 4e2x_A 183 H---------IPY-VQSVLEGVDALLAPDGVFVFE 207 (416)
T ss_dssp G---------CTT-HHHHHHHHHHHEEEEEEEEEE
T ss_pred h---------cCC-HHHHHHHHHHHcCCCeEEEEE
Confidence 2 222 234566677778994 66676
No 289
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=59.90 E-value=16 Score=32.23 Aligned_cols=74 Identities=8% Similarity=-0.060 Sum_probs=43.8
Q ss_pred cCCCCCCeEEeeecchhhHHH----HHHhc------CCCceEEEEEcCCHHHHHHHHHHcCCCCccccccccccccccCC
Q 023723 7 KNDGEAWRVLEFYSGIGGMRY----SLMKA------DVSAQVVEAFDINDKANDVYELNFGHRPYQAKRKPLSFRCQLLN 76 (278)
Q Consensus 7 ~~~~~~~~v~dLFsG~Gg~~~----gl~~a------G~~~~~v~a~e~~~~a~~~y~~N~~~~~~~~~~~~~~~~~~~~~ 76 (278)
++.|++++|.=+ |+|.+.. ++... ....++++.+|.++...+.+...|+.....++.. +....+++
T Consensus 1 s~~M~klrvgiI--G~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a~~~a~~~g~~~~~~d~~--~ll~~~~i 76 (390)
T 4h3v_A 1 SNAMTNLGIGLI--GYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVRAAAGKLGWSTTETDWR--TLLERDDV 76 (390)
T ss_dssp ---CCEEEEEEE--CHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHHHHHHHHHTCSEEESCHH--HHTTCTTC
T ss_pred CCCCCcCcEEEE--cCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHHHHHHHHcCCCcccCCHH--HHhcCCCC
Confidence 467888888766 5555432 22221 1124899999999999999998887654323211 11234579
Q ss_pred CEEEeCCC
Q 023723 77 NQLLRSPS 84 (278)
Q Consensus 77 Dll~~g~P 84 (278)
|+++-.-|
T Consensus 77 DaV~I~tP 84 (390)
T 4h3v_A 77 QLVDVCTP 84 (390)
T ss_dssp SEEEECSC
T ss_pred CEEEEeCC
Confidence 97765544
No 290
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=57.84 E-value=12 Score=33.57 Aligned_cols=74 Identities=14% Similarity=0.025 Sum_probs=46.2
Q ss_pred CCeEEeeecchhhHHHHHHhc-CCCceEEEEEcCCHHHHHHHHHHcCCCC---cccccccc----cccccc-CCCEEEeC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFGHRP---YQAKRKPL----SFRCQL-LNNQLLRS 82 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~a-G~~~~~v~a~e~~~~a~~~y~~N~~~~~---~~~~~~~~----~~~~~~-~~Dll~~g 82 (278)
.-.++|.-.|.||-+..+-.. |- --.|+++|.|+.|++.-+ +..... +.+....+ ...... .+|.++.-
T Consensus 58 ggiyVD~TlG~GGHS~~iL~~lg~-~GrVig~D~Dp~Al~~A~-rL~~~Rv~lv~~nF~~l~~~L~~~g~~~~vDgILfD 135 (347)
T 3tka_A 58 DGIYIDGTFGRGGHSRLILSQLGE-EGRLLAIDRDPQAIAVAK-TIDDPRFSIIHGPFSALGEYVAERDLIGKIDGILLD 135 (347)
T ss_dssp TCEEEESCCTTSHHHHHHHTTCCT-TCEEEEEESCHHHHHHHT-TCCCTTEEEEESCGGGHHHHHHHTTCTTCEEEEEEE
T ss_pred CCEEEEeCcCCCHHHHHHHHhCCC-CCEEEEEECCHHHHHHHH-hhcCCcEEEEeCCHHHHHHHHHhcCCCCcccEEEEC
Confidence 357999999999999988654 42 136889999999998764 332111 12221111 111122 58888887
Q ss_pred CCCCC
Q 023723 83 PSPLL 87 (278)
Q Consensus 83 ~PCq~ 87 (278)
..|..
T Consensus 136 LGVSS 140 (347)
T 3tka_A 136 LGVSS 140 (347)
T ss_dssp CSCCH
T ss_pred CccCH
Confidence 76654
No 291
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=56.55 E-value=7.7 Score=33.83 Aligned_cols=34 Identities=24% Similarity=0.344 Sum_probs=26.2
Q ss_pred CCeEEeeecchhhHHH-HHHhcCCCceEEEEEcCCHH
Q 023723 12 AWRVLEFYSGIGGMRY-SLMKADVSAQVVEAFDINDK 47 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~-gl~~aG~~~~~v~a~e~~~~ 47 (278)
..+||||.||.||++. +++..| ...|.++|+-.+
T Consensus 91 ~~~VLDLGaAPGGWsQvAa~~~g--v~sV~GvdvG~d 125 (282)
T 3gcz_A 91 TGIVVDLGCGRGGWSYYAASLKN--VKKVMAFTLGVQ 125 (282)
T ss_dssp CEEEEEETCTTCHHHHHHHTSTT--EEEEEEECCCCT
T ss_pred CCEEEEeCCCCCHHHHHHHHhcC--CCeeeeEEeccC
Confidence 3489999999999998 555666 466778888653
No 292
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=55.61 E-value=24 Score=31.97 Aligned_cols=81 Identities=12% Similarity=0.076 Sum_probs=45.2
Q ss_pred cccccCCCCCCeEEeeecc----hhhHH-HHHHhcCCCceEEE-EEcCCHHHHHHHHHHcCCC--Ccccccccccccc--
Q 023723 3 KDMCKNDGEAWRVLEFYSG----IGGMR-YSLMKADVSAQVVE-AFDINDKANDVYELNFGHR--PYQAKRKPLSFRC-- 72 (278)
Q Consensus 3 ~~~~~~~~~~~~v~dLFsG----~Gg~~-~gl~~aG~~~~~v~-a~e~~~~a~~~y~~N~~~~--~~~~~~~~~~~~~-- 72 (278)
.+|.+..|+++++.=+=+| +|... .++...+- +++++ .+|.++...+.+.+.++-. ...++...+-..+
T Consensus 28 ~~~~~~~m~~~rvgiiG~G~~~~ig~~h~~~~~~~~~-~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~ 106 (417)
T 3v5n_A 28 GSSTETRQKRIRLGMVGGGSGAFIGAVHRIAARLDDH-YELVAGALSSTPEKAEASGRELGLDPSRVYSDFKEMAIREAK 106 (417)
T ss_dssp -------CCCEEEEEESCC--CHHHHHHHHHHHHTSC-EEEEEEECCSSHHHHHHHHHHHTCCGGGBCSCHHHHHHHHHH
T ss_pred cccccccCCcceEEEEcCCCchHHHHHHHHHHhhCCC-cEEEEEEeCCCHHHHHHHHHHcCCCcccccCCHHHHHhcccc
Confidence 3566677889999888777 44443 33444442 68886 7899999988888877543 2222211111110
Q ss_pred -ccCCCEEEeCCC
Q 023723 73 -QLLNNQLLRSPS 84 (278)
Q Consensus 73 -~~~~Dll~~g~P 84 (278)
.+++|+++-.-|
T Consensus 107 ~~~~vD~V~I~tp 119 (417)
T 3v5n_A 107 LKNGIEAVAIVTP 119 (417)
T ss_dssp CTTCCSEEEECSC
T ss_pred cCCCCcEEEECCC
Confidence 157997776555
No 293
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=55.30 E-value=8.4 Score=33.53 Aligned_cols=32 Identities=25% Similarity=0.470 Sum_probs=24.0
Q ss_pred CCeEEeeecchhhHHH-HHHhcCCCceEEEEEcCC
Q 023723 12 AWRVLEFYSGIGGMRY-SLMKADVSAQVVEAFDIN 45 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~-gl~~aG~~~~~v~a~e~~ 45 (278)
..+||||.||.||++. +++..| ...+.++++-
T Consensus 75 ~~~VLDLGaAPGGWSQvAa~~~~--~~~v~g~dVG 107 (277)
T 3evf_A 75 EGRVIDLGCGRGGWCYYAAAQKE--VSGVKGFTLG 107 (277)
T ss_dssp CEEEEEETCTTCHHHHHHHTSTT--EEEEEEECCC
T ss_pred CCEEEEecCCCCHHHHHHHHhcC--CCcceeEEEe
Confidence 3489999999999998 555556 4566667665
No 294
>1yf3_A DNA adenine methylase; T4DAM, methyltransferase, transferase-DNA complex; HET: DNA SAH; 2.29A {Enterobacteria phage T4} SCOP: c.66.1.28 PDB: 1yfj_A* 1yfl_A* 1q0s_A* 1q0t_A*
Probab=50.83 E-value=5.1 Score=34.33 Aligned_cols=40 Identities=18% Similarity=0.239 Sum_probs=31.9
Q ss_pred CeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCC
Q 023723 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH 58 (278)
Q Consensus 13 ~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~ 58 (278)
-+.+|.|+|.|++.+.+. .+ ++.+|+|++-+..|+.--.+
T Consensus 26 ~~yvEpF~GggaV~~~~~-----~~-~viNDin~~li~~~~~i~~~ 65 (259)
T 1yf3_A 26 NRFVDLFCGGLSVSLNVN-----GP-VLANDIQEPIIEMYKRLINV 65 (259)
T ss_dssp SEEEETTCTTCTTGGGSC-----SS-EEEECSCHHHHHHHHHHTTC
T ss_pred CeEEEecCCccHHHHhcc-----cc-EEEecCChHHHHHHHHHHHh
Confidence 479999999999866542 25 88999999999999875444
No 295
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=47.85 E-value=17 Score=31.74 Aligned_cols=98 Identities=8% Similarity=0.032 Sum_probs=58.4
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCc-------cccccccccccccCCCEEEeCCC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-------QAKRKPLSFRCQLLNNQLLRSPS 84 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~-------~~~~~~~~~~~~~~~Dll~~g~P 84 (278)
.-+|+|+-||.|.+...+.+..-. -.+.++|+ +..++.-+.+...... ..+...........+|+++...-
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~v 257 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQ-LTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLNDC 257 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTT-CEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEESC
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCC-CeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEEEEecc
Confidence 579999999999999998876422 35677999 6666666665432221 11211111001235899987543
Q ss_pred CCCCCcccccCCCCCC-CCchHHHHhhhcCC--cEEEEE
Q 023723 85 PLLGNDDMTVITKHDQ-PDDSWDKLLESCDP--VERFLE 120 (278)
Q Consensus 85 Cq~fS~ag~~~g~~d~-r~~l~~~~i~~~~P--~~~i~E 120 (278)
... ..|+ ...++.++.+.++| ++++.|
T Consensus 258 lh~---------~~~~~~~~~l~~~~~~L~pgG~l~i~e 287 (352)
T 3mcz_A 258 LHY---------FDAREAREVIGHAAGLVKPGGALLILT 287 (352)
T ss_dssp GGG---------SCHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ccc---------CCHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 222 2222 23455566777888 577777
No 296
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=47.81 E-value=25 Score=30.80 Aligned_cols=96 Identities=8% Similarity=-0.040 Sum_probs=54.0
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCccc-cc-ccccc-ccccCCCEEEeCCCCCCC
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQA-KR-KPLSF-RCQLLNNQLLRSPSPLLG 88 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~~~-~~-~~~~~-~~~~~~Dll~~g~PCq~f 88 (278)
..+|+|+-||.|.+...+.+..-. -.+.++|+. .... +++.......+ +. ...+. ...+.+|+++...-...
T Consensus 185 ~~~vLDvG~G~G~~~~~l~~~~p~-~~~~~~D~~-~~~~--~~~~~~~~~~~~v~~~~~d~~~~~p~~D~v~~~~vlh~- 259 (348)
T 3lst_A 185 TGTVADVGGGRGGFLLTVLREHPG-LQGVLLDRA-EVVA--RHRLDAPDVAGRWKVVEGDFLREVPHADVHVLKRILHN- 259 (348)
T ss_dssp SEEEEEETCTTSHHHHHHHHHCTT-EEEEEEECH-HHHT--TCCCCCGGGTTSEEEEECCTTTCCCCCSEEEEESCGGG-
T ss_pred CceEEEECCccCHHHHHHHHHCCC-CEEEEecCH-HHhh--cccccccCCCCCeEEEecCCCCCCCCCcEEEEehhccC-
Confidence 469999999999999998776432 346778883 3333 33322111111 10 00011 12237888886543322
Q ss_pred CcccccCCCCCCC-CchHHHHhhhcCC--cEEEEE
Q 023723 89 NDDMTVITKHDQP-DDSWDKLLESCDP--VERFLE 120 (278)
Q Consensus 89 S~ag~~~g~~d~r-~~l~~~~i~~~~P--~~~i~E 120 (278)
..|+. ..++.++.+.++| ++++.|
T Consensus 260 --------~~d~~~~~~L~~~~~~LkpgG~l~i~e 286 (348)
T 3lst_A 260 --------WGDEDSVRILTNCRRVMPAHGRVLVID 286 (348)
T ss_dssp --------SCHHHHHHHHHHHHHTCCTTCEEEEEE
T ss_pred --------CCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 22221 3456667778999 577778
No 297
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=45.71 E-value=59 Score=28.65 Aligned_cols=71 Identities=8% Similarity=0.041 Sum_probs=44.9
Q ss_pred CCCCeEEeeecchhhH---HHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCccccccccccccccCCCEEEeCCC
Q 023723 10 GEAWRVLEFYSGIGGM---RYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQAKRKPLSFRCQLLNNQLLRSPS 84 (278)
Q Consensus 10 ~~~~~v~dLFsG~Gg~---~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~~~~~~~~~~~~~~~~Dll~~g~P 84 (278)
|+++++.=+=+|..+. .-.+...+ ++++..+|.++...+.+.+-|+.....++.. +....+++|+++-.-|
T Consensus 24 m~~irvgiiG~G~~~~~~~~~~~~~~~--~~lvav~d~~~~~a~~~a~~~~~~~~~~~~~--~ll~~~~vD~V~I~tp 97 (361)
T 3u3x_A 24 MDELRFAAVGLNHNHIYGQVNCLLRAG--ARLAGFHEKDDALAAEFSAVYADARRIATAE--EILEDENIGLIVSAAV 97 (361)
T ss_dssp --CCEEEEECCCSTTHHHHHHHHHHTT--CEEEEEECSCHHHHHHHHHHSSSCCEESCHH--HHHTCTTCCEEEECCC
T ss_pred ccCcEEEEECcCHHHHHHHHHHhhcCC--cEEEEEEcCCHHHHHHHHHHcCCCcccCCHH--HHhcCCCCCEEEEeCC
Confidence 4568888777765442 22344567 6999999999999999888887443222211 1122357998776555
No 298
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=45.46 E-value=35 Score=29.95 Aligned_cols=76 Identities=9% Similarity=0.026 Sum_probs=41.2
Q ss_pred cCCCCCCeEEeeecchhhH-HH-HHHhcC------CCceEEEEEcCCHHHHHHHHHHcCCCCccccccccccccccCCCE
Q 023723 7 KNDGEAWRVLEFYSGIGGM-RY-SLMKAD------VSAQVVEAFDINDKANDVYELNFGHRPYQAKRKPLSFRCQLLNNQ 78 (278)
Q Consensus 7 ~~~~~~~~v~dLFsG~Gg~-~~-gl~~aG------~~~~~v~a~e~~~~a~~~y~~N~~~~~~~~~~~~~~~~~~~~~Dl 78 (278)
-++|+++||.=+=+|.=|- ++ ++.... -.+++|+.+|.++...+.+...|+.....++.. +....+++|+
T Consensus 20 ~~~MkkirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~--ell~~~~iDa 97 (393)
T 4fb5_A 20 FQSMKPLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFEKATADWR--ALIADPEVDV 97 (393)
T ss_dssp ----CCCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCSEEESCHH--HHHHCTTCCE
T ss_pred ccCCCCccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCCeecCCHH--HHhcCCCCcE
Confidence 4568899998775553222 11 222210 015899999999999998888887654322211 1123457997
Q ss_pred EEeCCC
Q 023723 79 LLRSPS 84 (278)
Q Consensus 79 l~~g~P 84 (278)
++-..|
T Consensus 98 V~IatP 103 (393)
T 4fb5_A 98 VSVTTP 103 (393)
T ss_dssp EEECSC
T ss_pred EEECCC
Confidence 765544
No 299
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=44.41 E-value=17 Score=31.13 Aligned_cols=34 Identities=21% Similarity=0.300 Sum_probs=29.2
Q ss_pred CCeEEeeecchhhHHH-HHHhcCCCceEEEEEcCCHH
Q 023723 12 AWRVLEFYSGIGGMRY-SLMKADVSAQVVEAFDINDK 47 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~-gl~~aG~~~~~v~a~e~~~~ 47 (278)
..+|+||=|+.||++. +....| ...|.|+|+-..
T Consensus 79 g~~VvDLGaapGGWSq~~a~~~g--~~~V~avdvG~~ 113 (267)
T 3p8z_A 79 EGRVIDLGCGRGGWSYYCAGLKK--VTEVRGYTKGGP 113 (267)
T ss_dssp CEEEEEESCTTSHHHHHHHTSTT--EEEEEEECCCST
T ss_pred CCEEEEcCCCCCcHHHHHHHhcC--CCEEEEEecCCC
Confidence 4599999999999998 888888 579999999654
No 300
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=42.11 E-value=15 Score=32.50 Aligned_cols=34 Identities=21% Similarity=0.330 Sum_probs=29.0
Q ss_pred CCeEEeeecchhhHHH-HHHhcCCCceEEEEEcCCHH
Q 023723 12 AWRVLEFYSGIGGMRY-SLMKADVSAQVVEAFDINDK 47 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~-gl~~aG~~~~~v~a~e~~~~ 47 (278)
..+|+||=|+.||++. ++...| ...|.|+|+-..
T Consensus 95 ~~~VlDLGaapGGwsq~~~~~~g--v~~V~avdvG~~ 129 (321)
T 3lkz_A 95 VGKVIDLGCGRGGWCYYMATQKR--VQEVRGYTKGGP 129 (321)
T ss_dssp CEEEEEETCTTCHHHHHHTTCTT--EEEEEEECCCST
T ss_pred CCEEEEeCCCCCcHHHHHHhhcC--CCEEEEEEcCCC
Confidence 3499999999999998 788888 578999999654
No 301
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=41.93 E-value=25 Score=31.89 Aligned_cols=67 Identities=13% Similarity=0.168 Sum_probs=40.9
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCC-ccccccccccccccCCCEEEeCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP-YQAKRKPLSFRCQLLNNQLLRSP 83 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~-~~~~~~~~~~~~~~~~Dll~~g~ 83 (278)
...+|+||-|..||++.-+.+.|. .|+|+|+-+-+-.. ...|... +..+..... .....+|+++.--
T Consensus 211 ~G~~vlDLGAaPGGWT~~l~~rg~---~V~aVD~~~l~~~l--~~~~~V~~~~~d~~~~~-~~~~~~D~vvsDm 278 (375)
T 4auk_A 211 NGMWAVDLGACPGGWTYQLVKRNM---WVYSVDNGPMAQSL--MDTGQVTWLREDGFKFR-PTRSNISWMVCDM 278 (375)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTC---EEEEECSSCCCHHH--HTTTCEEEECSCTTTCC-CCSSCEEEEEECC
T ss_pred CCCEEEEeCcCCCHHHHHHHHCCC---EEEEEEhhhcChhh--ccCCCeEEEeCcccccc-CCCCCcCEEEEcC
Confidence 357999999999999999888883 68999975432211 1223332 233322221 1124688887643
No 302
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=40.02 E-value=77 Score=27.77 Aligned_cols=97 Identities=11% Similarity=0.081 Sum_probs=57.7
Q ss_pred CeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCccccc---cccccccccCCCEEEeCCCCCCCC
Q 023723 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQAKR---KPLSFRCQLLNNQLLRSPSPLLGN 89 (278)
Q Consensus 13 ~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~~~~~---~~~~~~~~~~~Dll~~g~PCq~fS 89 (278)
-+++|+=+|.|.+...+.++--..+ +...|. +..++.-+.+........+. -+.-....++.|+++...=.-+
T Consensus 181 ~~v~DvGgG~G~~~~~l~~~~p~~~-~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~~~~D~~~~~~vlh~-- 256 (353)
T 4a6d_A 181 PLMCDLGGGAGALAKECMSLYPGCK-ITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLPEADLYILARVLHD-- 256 (353)
T ss_dssp SEEEEETCTTSHHHHHHHHHCSSCE-EEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTSCCCCCSEEEEESSGGG--
T ss_pred CeEEeeCCCCCHHHHHHHHhCCCce-eEeccC-HHHHHHHHHhhhhcccCceeeecCccccCCCCCceEEEeeeeccc--
Confidence 3799999999999999988753333 345665 67777777776533211110 0011112456787776543222
Q ss_pred cccccCCCCCCC-CchHHHHhhhcCC--cEEEEE
Q 023723 90 DDMTVITKHDQP-DDSWDKLLESCDP--VERFLE 120 (278)
Q Consensus 90 ~ag~~~g~~d~r-~~l~~~~i~~~~P--~~~i~E 120 (278)
..|+. ..++.++.+..+| +++|+|
T Consensus 257 -------~~d~~~~~iL~~~~~al~pgg~lli~e 283 (353)
T 4a6d_A 257 -------WADGKCSHLLERIYHTCKPGGGILVIE 283 (353)
T ss_dssp -------SCHHHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred -------CCHHHHHHHHHHHHhhCCCCCEEEEEE
Confidence 33333 2355567777899 688999
No 303
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=39.05 E-value=46 Score=28.83 Aligned_cols=71 Identities=11% Similarity=0.116 Sum_probs=42.9
Q ss_pred CCCCeEEeeecchhhH---HHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCccccccccccccccCCCEEEeCCC
Q 023723 10 GEAWRVLEFYSGIGGM---RYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQAKRKPLSFRCQLLNNQLLRSPS 84 (278)
Q Consensus 10 ~~~~~v~dLFsG~Gg~---~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~~~~~~~~~~~~~~~~Dll~~g~P 84 (278)
|+++++.=+=+|..|. ..++...| ++++..+|.++...+.+.+-|+......+.. +....+++|+++-..|
T Consensus 2 M~~~rvgiiG~G~~~~~~~~~~l~~~~--~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~--~ll~~~~~D~V~i~tp 75 (336)
T 2p2s_A 2 MKKIRFAAIGLAHNHIYDMCQQLIDAG--AELAGVFESDSDNRAKFTSLFPSVPFAASAE--QLITDASIDLIACAVI 75 (336)
T ss_dssp --CCEEEEECCSSTHHHHHHHHHHHTT--CEEEEEECSCTTSCHHHHHHSTTCCBCSCHH--HHHTCTTCCEEEECSC
T ss_pred CCccEEEEECCChHHHHHhhhhhcCCC--cEEEEEeCCCHHHHHHHHHhcCCCcccCCHH--HHhhCCCCCEEEEeCC
Confidence 5567887665664443 22344557 6899999999988888888876443222211 1122357998776555
No 304
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=37.93 E-value=30 Score=30.02 Aligned_cols=107 Identities=9% Similarity=-0.002 Sum_probs=56.4
Q ss_pred CCeEEeeec------chhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCC--ccccccccccccccCCCEEEeCC
Q 023723 12 AWRVLEFYS------GIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP--YQAKRKPLSFRCQLLNNQLLRSP 83 (278)
Q Consensus 12 ~~~v~dLFs------G~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~--~~~~~~~~~~~~~~~~Dll~~g~ 83 (278)
..+||||.| |.|+ .+..+..+- --.|.++|+++. .++.. +..|...... ...+|+++..+
T Consensus 64 g~~VLDLGcGsg~~~GpGs-~~~a~~~~~-~~~V~gvDis~~--------v~~v~~~i~gD~~~~~~--~~~fD~Vvsn~ 131 (290)
T 2xyq_A 64 NMRVIHFGAGSDKGVAPGT-AVLRQWLPT-GTLLVDSDLNDF--------VSDADSTLIGDCATVHT--ANKWDLIISDM 131 (290)
T ss_dssp TCEEEEESCCCTTSBCHHH-HHHHHHSCT-TCEEEEEESSCC--------BCSSSEEEESCGGGCCC--SSCEEEEEECC
T ss_pred CCEEEEeCCCCCCCCCcHH-HHHHHHcCC-CCEEEEEECCCC--------CCCCEEEEECccccCCc--cCcccEEEEcC
Confidence 468999999 6688 555666542 136899999988 12211 2222221111 14699999875
Q ss_pred CCCCCCcccccCCCCCCCC-chHHH----HhhhcCCc-EEEEE-eCCCc----cchhhccCc
Q 023723 84 SPLLGNDDMTVITKHDQPD-DSWDK----LLESCDPV-ERFLE-FSNSG----DQVNTETGF 134 (278)
Q Consensus 84 PCq~fS~ag~~~g~~d~r~-~l~~~----~i~~~~P~-~~i~E-v~~~~----~~~l~~~GY 134 (278)
++.. .|... .++.+. .++.. +.+.++|. .|+++ +.... .+.|++.||
T Consensus 132 ~~~~---~g~~~-~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~~~~l~~~l~~~GF 189 (290)
T 2xyq_A 132 YDPR---TKHVT-KENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWNADLYKLMGHFSW 189 (290)
T ss_dssp CCCC------CC-SCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCCHHHHHHHTTEEE
T ss_pred Cccc---ccccc-ccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCCHHHHHHHHHHcCC
Confidence 5322 22221 222332 23333 44458884 56665 44322 445556665
No 305
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=37.73 E-value=27 Score=30.66 Aligned_cols=34 Identities=24% Similarity=0.360 Sum_probs=26.9
Q ss_pred CCCeEEeeecchhhHHHHHHh-cCCCceEEEEEcCCH
Q 023723 11 EAWRVLEFYSGIGGMRYSLMK-ADVSAQVVEAFDIND 46 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~-aG~~~~~v~a~e~~~ 46 (278)
...+||||+|+.||++.-+.+ .| ...|.++|+..
T Consensus 81 ~g~~vlDLGaaPGgWsqva~~~~g--v~sV~Gvdlg~ 115 (300)
T 3eld_A 81 ITGRVLDLGCGRGGWSYYAAAQKE--VMSVKGYTLGI 115 (300)
T ss_dssp CCEEEEEETCTTCHHHHHHHTSTT--EEEEEEECCCC
T ss_pred CCCEEEEcCCCCCHHHHHHHHhcC--CceeeeEEecc
Confidence 457999999999999987775 46 46677888854
No 306
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=37.42 E-value=19 Score=32.00 Aligned_cols=93 Identities=8% Similarity=-0.110 Sum_probs=55.0
Q ss_pred CCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCC-ccccccccccccccCCCEEEeCCCCCCCCc
Q 023723 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP-YQAKRKPLSFRCQLLNNQLLRSPSPLLGND 90 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~-~~~~~~~~~~~~~~~~Dll~~g~PCq~fS~ 90 (278)
.-+|+|+-||.|.+...+.+..-.. .+.++|+ +..++.-+.+ +... ...+... ..++.|+++...-...++
T Consensus 204 ~~~vlDvG~G~G~~~~~l~~~~p~~-~~~~~D~-~~~~~~a~~~-~~v~~~~~d~~~----~~p~~D~v~~~~vlh~~~- 275 (368)
T 3reo_A 204 LTTIVDVGGGTGAVASMIVAKYPSI-NAINFDL-PHVIQDAPAF-SGVEHLGGDMFD----GVPKGDAIFIKWICHDWS- 275 (368)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTC-EEEEEEC-HHHHTTCCCC-TTEEEEECCTTT----CCCCCSEEEEESCGGGBC-
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCC-EEEEEeh-HHHHHhhhhc-CCCEEEecCCCC----CCCCCCEEEEechhhcCC-
Confidence 4699999999999999987754222 4678999 6665433221 1111 1122111 122348887765543332
Q ss_pred ccccCCCCCC-CCchHHHHhhhcCC--cEEEEE
Q 023723 91 DMTVITKHDQ-PDDSWDKLLESCDP--VERFLE 120 (278)
Q Consensus 91 ag~~~g~~d~-r~~l~~~~i~~~~P--~~~i~E 120 (278)
|+ ...++.++.+.++| ++++.|
T Consensus 276 --------~~~~~~~l~~~~~~L~pgG~l~i~e 300 (368)
T 3reo_A 276 --------DEHCLKLLKNCYAALPDHGKVIVAE 300 (368)
T ss_dssp --------HHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred --------HHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 22 12456667777899 577888
No 307
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=36.21 E-value=54 Score=27.64 Aligned_cols=101 Identities=7% Similarity=-0.052 Sum_probs=57.2
Q ss_pred CCCCeEEeeecchhhHHHHH----HhcCCCce-EEEEEcCCHHHHHHHHHHcCCC-Ccccc-----ccccccc-------
Q 023723 10 GEAWRVLEFYSGIGGMRYSL----MKADVSAQ-VVEAFDINDKANDVYELNFGHR-PYQAK-----RKPLSFR------- 71 (278)
Q Consensus 10 ~~~~~v~dLFsG~Gg~~~gl----~~aG~~~~-~v~a~e~~~~a~~~y~~N~~~~-~~~~~-----~~~~~~~------- 71 (278)
....+|||+-||.|.++..+ ...+-... .+.++|.++..++..+++.... ....+ .......
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccc
Confidence 34579999999999876432 11111123 2489999999998888775321 11110 0011111
Q ss_pred -cccCCCEEEeCCCCCCCCcccccCCCCCCCCchHHHHhhhcCCc--EEEEE
Q 023723 72 -CQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPV--ERFLE 120 (278)
Q Consensus 72 -~~~~~Dll~~g~PCq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~--~~i~E 120 (278)
....+|++++..-... ..|. ...+.++.+.++|. +++.+
T Consensus 131 ~~~~~fD~V~~~~~l~~---------~~d~-~~~l~~~~r~LkpgG~l~i~~ 172 (292)
T 2aot_A 131 KELQKWDFIHMIQMLYY---------VKDI-PATLKFFHSLLGTNAKMLIIV 172 (292)
T ss_dssp TCCCCEEEEEEESCGGG---------CSCH-HHHHHHHHHTEEEEEEEEEEE
T ss_pred cCCCceeEEEEeeeeee---------cCCH-HHHHHHHHHHcCCCcEEEEEE
Confidence 1245899987644222 3232 34677788889995 44445
No 308
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=34.91 E-value=93 Score=27.03 Aligned_cols=100 Identities=10% Similarity=0.100 Sum_probs=59.2
Q ss_pred CCeEEeeecchhhHHHHHHhc-CCCceEEEEEcCCHHHHHHHHHHcCCCC---cc--------ccccccccccccCCCEE
Q 023723 12 AWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFGHRP---YQ--------AKRKPLSFRCQLLNNQL 79 (278)
Q Consensus 12 ~~~v~dLFsG~Gg~~~gl~~a-G~~~~~v~a~e~~~~a~~~y~~N~~~~~---~~--------~~~~~~~~~~~~~~Dll 79 (278)
+-+||-+=.|.||...-+.+. + .+.|..||||+.-++.-+.-+|... .. +|....-......+|+|
T Consensus 84 pk~VLIiGgGdG~~~revlk~~~--v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvI 161 (294)
T 3o4f_A 84 AKHVLIIGGGDGAMLREVTRHKN--VESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp CCEEEEESCTTSHHHHHHHTCTT--CCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEE
T ss_pred CCeEEEECCCchHHHHHHHHcCC--cceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEE
Confidence 457888888888877666554 4 5788999999999888887775321 11 22111111223579999
Q ss_pred EeCCCCCCCCcccccCCCCCCCCchHHHHh-hhcCCcEEEEE
Q 023723 80 LRSPSPLLGNDDMTVITKHDQPDDSWDKLL-ESCDPVERFLE 120 (278)
Q Consensus 80 ~~g~PCq~fS~ag~~~g~~d~r~~l~~~~i-~~~~P~~~i~E 120 (278)
+.-.+-.. ..+ ..+ -+.-|++.+ +.++|.-+++=
T Consensus 162 i~D~~dp~-~~~---~~L---~t~eFy~~~~~~L~p~Gv~v~ 196 (294)
T 3o4f_A 162 ISDCTDPI-GPG---ESL---FTSAFYEGCKRCLNPGGIFVA 196 (294)
T ss_dssp EESCCCCC-CTT---CCS---SCCHHHHHHHHTEEEEEEEEE
T ss_pred EEeCCCcC-CCc---hhh---cCHHHHHHHHHHhCCCCEEEE
Confidence 98766321 111 111 123455544 45888766553
No 309
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=33.08 E-value=64 Score=29.16 Aligned_cols=48 Identities=8% Similarity=0.034 Sum_probs=38.8
Q ss_pred CCCeEEeeecchhhHHHHHH-hcCCCceEEEEEcCCHHHHHHHHHHcCC
Q 023723 11 EAWRVLEFYSGIGGMRYSLM-KADVSAQVVEAFDINDKANDVYELNFGH 58 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~-~aG~~~~~v~a~e~~~~a~~~y~~N~~~ 58 (278)
..-.++|.=|++|..++-+. ..+.+...|+|+|-++.+.+..++|...
T Consensus 226 ~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~ 274 (409)
T 2py6_A 226 DSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRR 274 (409)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHH
T ss_pred CCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHh
Confidence 45689999999999998776 4432235899999999999999999753
No 310
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=30.55 E-value=22 Score=28.31 Aligned_cols=97 Identities=16% Similarity=0.097 Sum_probs=56.1
Q ss_pred CCCeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCccccccccccccccCCCEEEeCCCCCCCCc
Q 023723 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQAKRKPLSFRCQLLNNQLLRSPSPLLGND 90 (278)
Q Consensus 11 ~~~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~~~~~~~~~~~~~~~~Dll~~g~PCq~fS~ 90 (278)
...+|||+-||.|.+...+ + ..+.++|+++. | -.....+..... .....+|+++....-.
T Consensus 67 ~~~~vLDiG~G~G~~~~~l---~---~~v~~~D~s~~-------~--~~~~~~d~~~~~-~~~~~fD~v~~~~~l~---- 126 (215)
T 2zfu_A 67 ASLVVADFGCGDCRLASSI---R---NPVHCFDLASL-------D--PRVTVCDMAQVP-LEDESVDVAVFCLSLM---- 126 (215)
T ss_dssp TTSCEEEETCTTCHHHHHC---C---SCEEEEESSCS-------S--TTEEESCTTSCS-CCTTCEEEEEEESCCC----
T ss_pred CCCeEEEECCcCCHHHHHh---h---ccEEEEeCCCC-------C--ceEEEeccccCC-CCCCCEeEEEEehhcc----
Confidence 4578999999999987766 3 25788999987 1 111222222111 1224689999754321
Q ss_pred ccccCCCCCCCCchHHHHhhhcCCc--EEEEE-eCC---Cc--cchhhccCc
Q 023723 91 DMTVITKHDQPDDSWDKLLESCDPV--ERFLE-FSN---SG--DQVNTETGF 134 (278)
Q Consensus 91 ag~~~g~~d~r~~l~~~~i~~~~P~--~~i~E-v~~---~~--~~~l~~~GY 134 (278)
. .....++.++.+.++|. +++.| ... .. .+.|++.|+
T Consensus 127 ------~-~~~~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~~~~l~~~Gf 171 (215)
T 2zfu_A 127 ------G-TNIRDFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLRAVTKLGF 171 (215)
T ss_dssp ------S-SCHHHHHHHHHHHEEEEEEEEEEECGGGCSCHHHHHHHHHHTTE
T ss_pred ------c-cCHHHHHHHHHHhCCCCeEEEEEEcCCCCCCHHHHHHHHHHCCC
Confidence 1 12234566677778884 55556 221 11 556666776
No 311
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=30.52 E-value=1.1e+02 Score=26.74 Aligned_cols=71 Identities=10% Similarity=-0.052 Sum_probs=41.5
Q ss_pred CCCCCeEEeeecch-hh--HHHHHHhc-CCCceEEEEEcCCHHHHHHHHHHcCCCCccccccccccccccCCCEEEeCCC
Q 023723 9 DGEAWRVLEFYSGI-GG--MRYSLMKA-DVSAQVVEAFDINDKANDVYELNFGHRPYQAKRKPLSFRCQLLNNQLLRSPS 84 (278)
Q Consensus 9 ~~~~~~v~dLFsG~-Gg--~~~gl~~a-G~~~~~v~a~e~~~~a~~~y~~N~~~~~~~~~~~~~~~~~~~~~Dll~~g~P 84 (278)
+|+++++.=+=+|. |. +-.++... + +++++.+|.++...+.+...++-..+ ++.. +....+++|+++-.-|
T Consensus 24 ~m~~~rigiIG~G~~g~~~~~~~l~~~~~--~~l~av~d~~~~~~~~~a~~~g~~~~-~~~~--~ll~~~~~D~V~i~tp 98 (350)
T 3rc1_A 24 NANPIRVGVIGCADIAWRRALPALEAEPL--TEVTAIASRRWDRAKRFTERFGGEPV-EGYP--ALLERDDVDAVYVPLP 98 (350)
T ss_dssp --CCEEEEEESCCHHHHHTHHHHHHHCTT--EEEEEEEESSHHHHHHHHHHHCSEEE-ESHH--HHHTCTTCSEEEECCC
T ss_pred CCCceEEEEEcCcHHHHHHHHHHHHhCCC--eEEEEEEcCCHHHHHHHHHHcCCCCc-CCHH--HHhcCCCCCEEEECCC
Confidence 35667776554442 22 12345555 5 78999999999888888777654333 2211 1122357898877655
No 312
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=29.67 E-value=54 Score=24.12 Aligned_cols=53 Identities=15% Similarity=-0.071 Sum_probs=30.8
Q ss_pred HHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCc-ccccc--ccccccccCCCEEEeCCC
Q 023723 28 SLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-QAKRK--PLSFRCQLLNNQLLRSPS 84 (278)
Q Consensus 28 gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~-~~~~~--~~~~~~~~~~Dll~~g~P 84 (278)
.|...|. .|.++|.++..++..+... ...+ .|... .+......++|+++...|
T Consensus 24 ~L~~~g~---~V~~id~~~~~~~~~~~~~-~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~ 79 (141)
T 3llv_A 24 ELTAAGK---KVLAVDKSKEKIELLEDEG-FDAVIADPTDESFYRSLDLEGVSAVLITGS 79 (141)
T ss_dssp HHHHTTC---CEEEEESCHHHHHHHHHTT-CEEEECCTTCHHHHHHSCCTTCSEEEECCS
T ss_pred HHHHCCC---eEEEEECCHHHHHHHHHCC-CcEEECCCCCHHHHHhCCcccCCEEEEecC
Confidence 4566783 5677999999888776532 1112 22211 122223457899888766
No 313
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=28.42 E-value=1.7e+02 Score=24.72 Aligned_cols=68 Identities=16% Similarity=0.141 Sum_probs=40.5
Q ss_pred CCCCCCeEEeeecchhhHHH-----HHHh-cCCCceEEEEEcCCHHHHHHHHHHcCCCCccccccccccccccCCCEEEe
Q 023723 8 NDGEAWRVLEFYSGIGGMRY-----SLMK-ADVSAQVVEAFDINDKANDVYELNFGHRPYQAKRKPLSFRCQLLNNQLLR 81 (278)
Q Consensus 8 ~~~~~~~v~dLFsG~Gg~~~-----gl~~-aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~~~~~~~~~~~~~~~~Dll~~ 81 (278)
+.|+++++.=+=+| .+.. ++.. .+ ++++..+|.++...+.+...++...+.+. ..+ .. ++|+++-
T Consensus 2 ~~M~~~~igiIG~G--~~g~~~~~~~l~~~~~--~~l~av~d~~~~~~~~~a~~~~~~~~~~~-~~l--l~--~~D~V~i 72 (308)
T 3uuw_A 2 NAMKNIKMGMIGLG--SIAQKAYLPILTKSER--FEFVGAFTPNKVKREKICSDYRIMPFDSI-ESL--AK--KCDCIFL 72 (308)
T ss_dssp ---CCCEEEEECCS--HHHHHHTHHHHTSCSS--SEEEEEECSCHHHHHHHHHHHTCCBCSCH-HHH--HT--TCSEEEE
T ss_pred CccccCcEEEEecC--HHHHHHHHHHHHhCCC--eEEEEEECCCHHHHHHHHHHcCCCCcCCH-HHH--Hh--cCCEEEE
Confidence 34667888755444 4333 2443 34 68999999999998888887765432221 111 11 7898777
Q ss_pred CCC
Q 023723 82 SPS 84 (278)
Q Consensus 82 g~P 84 (278)
.-|
T Consensus 73 ~tp 75 (308)
T 3uuw_A 73 HSS 75 (308)
T ss_dssp CCC
T ss_pred eCC
Confidence 655
No 314
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=28.26 E-value=93 Score=27.24 Aligned_cols=75 Identities=12% Similarity=-0.002 Sum_probs=41.8
Q ss_pred ccCCCCCCeEEeeecchhhHH--HHHH-h-cCCCceEEEEEcCCHHHHHHHHHHcCC-CCccccccccccccccCCCEEE
Q 023723 6 CKNDGEAWRVLEFYSGIGGMR--YSLM-K-ADVSAQVVEAFDINDKANDVYELNFGH-RPYQAKRKPLSFRCQLLNNQLL 80 (278)
Q Consensus 6 ~~~~~~~~~v~dLFsG~Gg~~--~gl~-~-aG~~~~~v~a~e~~~~a~~~y~~N~~~-~~~~~~~~~~~~~~~~~~Dll~ 80 (278)
+.++|+++++.=+=+|.=|.. .++. . .+ ++++..+|.++...+.+...++. .....+.. +....+++|+++
T Consensus 17 ~~~~m~~~rvgiIG~G~~g~~~~~~l~~~~~~--~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~--~ll~~~~~D~V~ 92 (357)
T 3ec7_A 17 LYFQGMTLKAGIVGIGMIGSDHLRRLANTVSG--VEVVAVCDIVAGRAQAALDKYAIEAKDYNDYH--DLINDKDVEVVI 92 (357)
T ss_dssp -----CCEEEEEECCSHHHHHHHHHHHHTCTT--EEEEEEECSSTTHHHHHHHHHTCCCEEESSHH--HHHHCTTCCEEE
T ss_pred cccCCCeeeEEEECCcHHHHHHHHHHHhhCCC--cEEEEEEeCCHHHHHHHHHHhCCCCeeeCCHH--HHhcCCCCCEEE
Confidence 456677788876655542222 2344 2 35 78999999999988888887762 22222211 112235789877
Q ss_pred eCCC
Q 023723 81 RSPS 84 (278)
Q Consensus 81 ~g~P 84 (278)
-.-|
T Consensus 93 i~tp 96 (357)
T 3ec7_A 93 ITAS 96 (357)
T ss_dssp ECSC
T ss_pred EcCC
Confidence 7655
No 315
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=26.72 E-value=1.7e+02 Score=25.25 Aligned_cols=73 Identities=7% Similarity=-0.068 Sum_probs=44.2
Q ss_pred CCCCeEEeeecc-h-hhH-HHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCCccccccccccccccCCCEEEeCCC
Q 023723 10 GEAWRVLEFYSG-I-GGM-RYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQAKRKPLSFRCQLLNNQLLRSPS 84 (278)
Q Consensus 10 ~~~~~v~dLFsG-~-Gg~-~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~~~~~~~~~~~~~~~~~Dll~~g~P 84 (278)
++++++.=+=+| . |.. -.++...+-.++++..+|.++...+.+.+.|+.....++.. +....+++|+++-.-|
T Consensus 16 ~~~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~--~ll~~~~vD~V~i~tp 91 (340)
T 1zh8_A 16 LRKIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFDSYE--ELLESGLVDAVDLTLP 91 (340)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEESCHH--HHHHSSCCSEEEECCC
T ss_pred CCceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHhCCCcccCCHH--HHhcCCCCCEEEEeCC
Confidence 345788766666 2 332 23555552237999999999999888888776422222211 1122357998777655
No 316
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=25.84 E-value=1.5e+02 Score=26.25 Aligned_cols=76 Identities=16% Similarity=0.134 Sum_probs=46.1
Q ss_pred CCCCCCeEEeeecc----hhhHH-HHHHhcCCCceEEE-EEcCCHHHHHHHHHHcCCC--Ccccccccc-cc--ccccCC
Q 023723 8 NDGEAWRVLEFYSG----IGGMR-YSLMKADVSAQVVE-AFDINDKANDVYELNFGHR--PYQAKRKPL-SF--RCQLLN 76 (278)
Q Consensus 8 ~~~~~~~v~dLFsG----~Gg~~-~gl~~aG~~~~~v~-a~e~~~~a~~~y~~N~~~~--~~~~~~~~~-~~--~~~~~~ 76 (278)
..|+++++.=+=+| +|... .++...+ .++++. .+|.++...+.+...++-. ...++...+ .. ...+++
T Consensus 8 ~~m~~~rvgiiG~G~~~~ig~~h~~~~~~~~-~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~v 86 (398)
T 3dty_A 8 RIPQPIRWAMVGGGSQSQIGYIHRCAALRDN-TFVLVAGAFDIDPIRGSAFGEQLGVDSERCYADYLSMFEQEARRADGI 86 (398)
T ss_dssp CSCSCEEEEEEECCTTCSSHHHHHHHHHGGG-SEEEEEEECCSSHHHHHHHHHHTTCCGGGBCSSHHHHHHHHTTCTTCC
T ss_pred cccCcceEEEEcCCccchhHHHHHHHHhhCC-CeEEEEEEeCCCHHHHHHHHHHhCCCcceeeCCHHHHHhcccccCCCC
Confidence 34778999888788 45444 3454444 267887 6799999999888887653 222221111 11 012469
Q ss_pred CEEEeCCC
Q 023723 77 NQLLRSPS 84 (278)
Q Consensus 77 Dll~~g~P 84 (278)
|+++-.-|
T Consensus 87 D~V~i~tp 94 (398)
T 3dty_A 87 QAVSIATP 94 (398)
T ss_dssp SEEEEESC
T ss_pred CEEEECCC
Confidence 97766554
No 317
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=24.76 E-value=92 Score=27.31 Aligned_cols=71 Identities=14% Similarity=0.004 Sum_probs=42.9
Q ss_pred CCCCeEEeeecch-hhH--HHHHHhc-CCCceEEEEEcCCHHHHHHHHHHcCCCCccccccccccccccCCCEEEeCCC
Q 023723 10 GEAWRVLEFYSGI-GGM--RYSLMKA-DVSAQVVEAFDINDKANDVYELNFGHRPYQAKRKPLSFRCQLLNNQLLRSPS 84 (278)
Q Consensus 10 ~~~~~v~dLFsG~-Gg~--~~gl~~a-G~~~~~v~a~e~~~~a~~~y~~N~~~~~~~~~~~~~~~~~~~~~Dll~~g~P 84 (278)
|+++++.=+=+|. |.. ..++... + ++++..+|.++...+.....++.....++.. +....+++|+++-.-|
T Consensus 3 M~~~rigiIG~G~~g~~~~~~~l~~~~~--~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~--~ll~~~~vD~V~i~tp 77 (359)
T 3m2t_A 3 LSLIKVGLVGIGAQMQENLLPSLLQMQD--IRIVAACDSDLERARRVHRFISDIPVLDNVP--AMLNQVPLDAVVMAGP 77 (359)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHHHTCTT--EEEEEEECSSHHHHGGGGGTSCSCCEESSHH--HHHHHSCCSEEEECSC
T ss_pred CCcceEEEECCCHHHHHHHHHHHHhCCC--cEEEEEEcCCHHHHHHHHHhcCCCcccCCHH--HHhcCCCCCEEEEcCC
Confidence 4567877655554 331 2344444 4 7899999999998888777765443222211 1122357898777655
No 318
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=23.42 E-value=44 Score=30.73 Aligned_cols=96 Identities=20% Similarity=0.215 Sum_probs=53.6
Q ss_pred CCCCeEEeeecc------hhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCCC-ccccccccccc-----cccCCC
Q 023723 10 GEAWRVLEFYSG------IGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP-YQAKRKPLSFR-----CQLLNN 77 (278)
Q Consensus 10 ~~~~~v~dLFsG------~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~~-~~~~~~~~~~~-----~~~~~D 77 (278)
.+..+|||+-|| .||.++-+-..-.+--.|.++|+++... .+.++.. +..+...+... ....+|
T Consensus 215 ~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~----~~~~rI~fv~GDa~dlpf~~~l~~~d~sFD 290 (419)
T 3sso_A 215 NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH----VDELRIRTIQGDQNDAEFLDRIARRYGPFD 290 (419)
T ss_dssp TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG----GCBTTEEEEECCTTCHHHHHHHHHHHCCEE
T ss_pred CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh----hcCCCcEEEEecccccchhhhhhcccCCcc
Confidence 356899999999 6777776654311123788999999862 1222221 22332222111 125799
Q ss_pred EEEeCCCCCCCCcccccCCCCCCCCchHHHHhhhcCCc-EEEEE
Q 023723 78 QLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPV-ERFLE 120 (278)
Q Consensus 78 ll~~g~PCq~fS~ag~~~g~~d~r~~l~~~~i~~~~P~-~~i~E 120 (278)
+|+.. .+ .. ..| ....|.++.+.++|- +++++
T Consensus 291 lVisd-----gs---H~--~~d-~~~aL~el~rvLKPGGvlVi~ 323 (419)
T 3sso_A 291 IVIDD-----GS---HI--NAH-VRTSFAALFPHVRPGGLYVIE 323 (419)
T ss_dssp EEEEC-----SC---CC--HHH-HHHHHHHHGGGEEEEEEEEEE
T ss_pred EEEEC-----Cc---cc--chh-HHHHHHHHHHhcCCCeEEEEE
Confidence 99852 11 11 111 224566777889995 56677
No 319
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=22.05 E-value=1.5e+02 Score=26.72 Aligned_cols=45 Identities=20% Similarity=0.251 Sum_probs=36.8
Q ss_pred CeEEeeecchhhHHHHHHhcCCCceEEEEEcCCHHHHHHHHHHcCCC
Q 023723 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHR 59 (278)
Q Consensus 13 ~~v~dLFsG~Gg~~~gl~~aG~~~~~v~a~e~~~~a~~~y~~N~~~~ 59 (278)
-+||-+=.|.||...-+.+.. .+.|..||||+.-++.-+.-+|..
T Consensus 207 krVLIIGgGdG~~~revlkh~--~~~V~~VEIDp~VVe~ar~yfp~~ 251 (381)
T 3c6k_A 207 KDVLILGGGDGGILCEIVKLK--PKMVTMVEIDQMVIDGCKKYMRKT 251 (381)
T ss_dssp CEEEEEECTTCHHHHHHHTTC--CSEEEEEESCHHHHHHHHHHCCC-
T ss_pred CeEEEECCCcHHHHHHHHhcC--CceeEEEccCHHHHHHHHhhchhh
Confidence 478888888888877776666 478899999999999999988764
No 320
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=21.45 E-value=2.1e+02 Score=25.80 Aligned_cols=71 Identities=8% Similarity=-0.049 Sum_probs=42.7
Q ss_pred CCCCeEEeeec----chhh--HHHHHHhc--CCCceEEEEEcCCHHHHHHHHHHcCCC--CccccccccccccccCCCEE
Q 023723 10 GEAWRVLEFYS----GIGG--MRYSLMKA--DVSAQVVEAFDINDKANDVYELNFGHR--PYQAKRKPLSFRCQLLNNQL 79 (278)
Q Consensus 10 ~~~~~v~dLFs----G~Gg--~~~gl~~a--G~~~~~v~a~e~~~~a~~~y~~N~~~~--~~~~~~~~~~~~~~~~~Dll 79 (278)
|+++++.=+=+ |..| ...++... + +++++.+|.++...+.+.+.|+.. ....+.. +....+++|++
T Consensus 18 m~~irvgiIG~g~~gG~~g~~~~~~l~~~~~~--~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~--~ll~~~~vD~V 93 (438)
T 3btv_A 18 AAPIRVGFVGLNAAKGWAIKTHYPAILQLSSQ--FQITALYSPKIETSIATIQRLKLSNATAFPTLE--SFASSSTIDMI 93 (438)
T ss_dssp -CCEEEEEESCCTTSSSTTTTHHHHHHHTTTT--EEEEEEECSSHHHHHHHHHHTTCTTCEEESSHH--HHHHCSSCSEE
T ss_pred cCCCEEEEEcccCCCChHHHHHHHHHHhcCCC--eEEEEEEeCCHHHHHHHHHHcCCCcceeeCCHH--HHhcCCCCCEE
Confidence 35678876655 3323 23355555 5 789999999999888888777543 1112111 11223579988
Q ss_pred EeCCC
Q 023723 80 LRSPS 84 (278)
Q Consensus 80 ~~g~P 84 (278)
+-..|
T Consensus 94 ~i~tp 98 (438)
T 3btv_A 94 VIAIQ 98 (438)
T ss_dssp EECSC
T ss_pred EEeCC
Confidence 77655
No 321
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=20.88 E-value=1e+02 Score=27.43 Aligned_cols=71 Identities=8% Similarity=0.028 Sum_probs=42.1
Q ss_pred CCeEEeeecch-hhHH-HHHHhcC-------CCceEEEEEcCCHHHHHHHHHHcCCCCccccccccccccccCCCEEEeC
Q 023723 12 AWRVLEFYSGI-GGMR-YSLMKAD-------VSAQVVEAFDINDKANDVYELNFGHRPYQAKRKPLSFRCQLLNNQLLRS 82 (278)
Q Consensus 12 ~~~v~dLFsG~-Gg~~-~gl~~aG-------~~~~~v~a~e~~~~a~~~y~~N~~~~~~~~~~~~~~~~~~~~~Dll~~g 82 (278)
++||.=+=+|. |-.+ .++.+.+ -.+++|+.+|.++...+.+.+.|+.....++.. +....+++|+++-.
T Consensus 26 klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~~~~~~y~d~~--~ll~~~~vD~V~I~ 103 (412)
T 4gqa_A 26 RLNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGAEKAYGDWR--ELVNDPQVDVVDIT 103 (412)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHHTCSEEESSHH--HHHHCTTCCEEEEC
T ss_pred cceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHcCCCeEECCHH--HHhcCCCCCEEEEC
Confidence 47777665553 2221 2333321 126899999999999999998887654322211 11234578977655
Q ss_pred CC
Q 023723 83 PS 84 (278)
Q Consensus 83 ~P 84 (278)
.|
T Consensus 104 tp 105 (412)
T 4gqa_A 104 SP 105 (412)
T ss_dssp SC
T ss_pred CC
Confidence 44
Done!