BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023727
(278 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8VY97|Y4213_ARATH ER membrane protein complex subunit 7 homolog OS=Arabidopsis
thaliana GN=At4g32130 PE=1 SV=1
Length = 202
Score = 249 bits (637), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 137/207 (66%), Positives = 169/207 (81%), Gaps = 6/207 (2%)
Query: 69 MASIIRSKSVLSVFFINLFLSLVSSAVAVSSGSGDGFSISGRVKLPGMSLKAFGSPGGKA 128
MA I RS S+++ +LF +S + +SSGS D ++I+GRV++P ++ + K
Sbjct: 1 MAPIFRSTSLIAF---SLFFFFFASTLPISSGSEDSYTITGRVRVPASTVIGHAA---KF 54
Query: 129 SNVKVVLNGGEHVTFLRPDGYFSFQNMSAGTHLIEVAAIGYFFSPVRVDVSARHPGKVQA 188
SN+KV+LNGG+HVTFLRPDGYF+F + AGTHLIEV A+GYFFSPVRVDVSARH GKVQA
Sbjct: 55 SNIKVILNGGQHVTFLRPDGYFTFHKVPAGTHLIEVYALGYFFSPVRVDVSARHRGKVQA 114
Query: 189 ALTETRRGLNELVLEQLREEQYYEIREPFSIMSLVKSPMGLMMGFMLVVVFLMPKLMENM 248
LTETRR L ELVLE LR EQYYE+REPFS+MS+VKSPMGLM+GFM+VVVFLMPKLMEN+
Sbjct: 115 TLTETRRSLTELVLEPLRAEQYYEMREPFSVMSIVKSPMGLMVGFMVVVVFLMPKLMENI 174
Query: 249 DPEEMRRAQEEMRSQGVPSLANLIPGA 275
DPEEM+ AQE+MRSQGVPSL +L+P +
Sbjct: 175 DPEEMKSAQEQMRSQGVPSLTSLLPAS 201
>sp|Q0IHY5|EMC7_XENTR ER membrane protein complex subunit 7 OS=Xenopus tropicalis GN=emc7
PE=2 SV=1
Length = 237
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 93/171 (54%), Gaps = 16/171 (9%)
Query: 96 AVSSGSG-DGFSISGRVKLPGMSLKAFGSPGGKASNVKVVLNGGEHVTFLRPDGYFSFQN 154
+S GSG D F + GR +PG+ P + +V+++G EHV FLR DG F +
Sbjct: 32 VLSPGSGSDKFKVEGRAVVPGVR------PQDWVNTARVLVDGEEHVGFLRTDGSFVVHD 85
Query: 155 MSAGTHLIEVAAIGYFFSPVRVDVSARHPGKVQA------ALTETRRGLNELVLEQLREE 208
+ +G++++EV + + F PVRVD++++ GK++A +E R L ++
Sbjct: 86 VPSGSYVVEVISPAHRFEPVRVDITSK--GKMRARYVNHIKTSEVVRLPYPLQMKSSGPP 143
Query: 209 QYYEIREPFSIMSLVKSPMGLMMGFMLVVVFLMPKLMENMDPEEMRRAQEE 259
Y+ RE + + +PM +MM L++ L+PK++ DP EMRR E+
Sbjct: 144 SYFIKRETWGWTDFLMNPMVMMMVLPLLIFVLLPKVVNTSDP-EMRREMEQ 193
>sp|Q4R5V2|EMC7_MACFA ER membrane protein complex subunit 7 OS=Macaca fascicularis
GN=EMC7 PE=2 SV=1
Length = 242
Score = 85.5 bits (210), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 88/163 (53%), Gaps = 15/163 (9%)
Query: 103 DGFSISGRVKLPGMSLKAFGSPGGKASNVKVVLNGGEHVTFLRPDGYFSFQNMSAGTHLI 162
D F I GR +PG+ P S +V+++G EHV FL+ DG F ++ +G++++
Sbjct: 43 DRFKIEGRAVVPGVK------PQDWISAARVLVDGEEHVGFLKTDGSFVVHDIPSGSYVV 96
Query: 163 EVAAIGYFFSPVRVDVSARHPGKVQA------ALTETRRGLNELVLEQLREEQYYEIREP 216
EV + Y F PVRVD++++ GK++A +E R L ++ Y+ RE
Sbjct: 97 EVVSPAYRFDPVRVDITSK--GKMRARYVNHIKTSEVVRLPYPLQMKSSGPPSYFIKRES 154
Query: 217 FSIMSLVKSPMGLMMGFMLVVVFLMPKLMENMDPEEMRRAQEE 259
+ + +PM +MM L++ L+PK++ DP +MRR E+
Sbjct: 155 WGWTDFLMNPMVMMMVLPLLIFVLLPKVVNTSDP-DMRREMEQ 196
>sp|Q9NPA0|EMC7_HUMAN ER membrane protein complex subunit 7 OS=Homo sapiens GN=EMC7 PE=1
SV=1
Length = 242
Score = 85.1 bits (209), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 88/163 (53%), Gaps = 15/163 (9%)
Query: 103 DGFSISGRVKLPGMSLKAFGSPGGKASNVKVVLNGGEHVTFLRPDGYFSFQNMSAGTHLI 162
D F I GR +PG+ P S +V+++G EHV FL+ DG F ++ +G++++
Sbjct: 43 DRFKIEGRAVVPGVK------PQDWISAARVLVDGEEHVGFLKTDGSFVVHDIPSGSYVV 96
Query: 163 EVAAIGYFFSPVRVDVSARHPGKVQA------ALTETRRGLNELVLEQLREEQYYEIREP 216
EV + Y F PVRVD++++ GK++A +E R L ++ Y+ RE
Sbjct: 97 EVVSPAYRFDPVRVDITSK--GKMRARYVNYIKTSEVVRLPYPLQMKSSGPPSYFIKRES 154
Query: 217 FSIMSLVKSPMGLMMGFMLVVVFLMPKLMENMDPEEMRRAQEE 259
+ + +PM +MM L++ L+PK++ DP +MRR E+
Sbjct: 155 WGWTDFLMNPMVMMMVLPLLIFVLLPKVVNTSDP-DMRREMEQ 196
>sp|Q9EP72|EMC7_MOUSE ER membrane protein complex subunit 7 OS=Mus musculus GN=Emc7 PE=2
SV=1
Length = 241
Score = 85.1 bits (209), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 88/163 (53%), Gaps = 15/163 (9%)
Query: 103 DGFSISGRVKLPGMSLKAFGSPGGKASNVKVVLNGGEHVTFLRPDGYFSFQNMSAGTHLI 162
D F I GR +PG+ P S +V+++G EHV FL+ DG F ++ +G++++
Sbjct: 42 DRFKIEGRAVVPGVK------PQDWISAARVLVDGEEHVGFLKTDGSFVVHDIPSGSYVV 95
Query: 163 EVAAIGYFFSPVRVDVSARHPGKVQA------ALTETRRGLNELVLEQLREEQYYEIREP 216
EV + Y F PVRVD++++ GK++A +E R L ++ Y+ RE
Sbjct: 96 EVISPAYKFDPVRVDITSK--GKMRARYVNYIKTSEVVRLPYPLQMKSSGPPSYFIKRES 153
Query: 217 FSIMSLVKSPMGLMMGFMLVVVFLMPKLMENMDPEEMRRAQEE 259
+ + +PM +MM L++ L+PK++ DP +MRR E+
Sbjct: 154 WGWTDFLMNPMVMMMVLPLLIFVLLPKVVNTSDP-DMRREMEQ 195
>sp|A5PJA8|EMC7_BOVIN ER membrane protein complex subunit 7 OS=Bos taurus GN=EMC7 PE=2
SV=1
Length = 241
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 87/161 (54%), Gaps = 15/161 (9%)
Query: 105 FSISGRVKLPGMSLKAFGSPGGKASNVKVVLNGGEHVTFLRPDGYFSFQNMSAGTHLIEV 164
F I GR +PG+ P S +V+++G EHV FL+ DG F ++ +G++++EV
Sbjct: 44 FKIEGRAVVPGVK------PQDWISAARVLVDGEEHVGFLKTDGSFVVHDIPSGSYVVEV 97
Query: 165 AAIGYFFSPVRVDVSARHPGKVQA------ALTETRRGLNELVLEQLREEQYYEIREPFS 218
+ Y F PVRVD++++ GK++A +E R L ++ Y+ RE +
Sbjct: 98 ISPAYRFDPVRVDITSK--GKMRARYVNYIKTSEVVRLPYPLQMKSSGPPSYFIKRESWG 155
Query: 219 IMSLVKSPMGLMMGFMLVVVFLMPKLMENMDPEEMRRAQEE 259
+ +PM +MM L++ L+PK++ DP +MRR E+
Sbjct: 156 WTDFLMNPMVMMMVLPLLIFVLLPKVVNTSDP-DMRREMEQ 195
>sp|Q5TYV0|EMC7_DANRE ER membrane protein complex subunit 7 OS=Danio rerio GN=emc7 PE=2
SV=1
Length = 237
Score = 78.2 bits (191), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 97/171 (56%), Gaps = 15/171 (8%)
Query: 95 VAVSSGSGDGFSISGRVKLPGMSLKAFGSPGGKASNVKVVLNGGEHVTFLRPDGYFSFQN 154
VA S +GD F I GR +PG+ + + S +V++ G E+V FL+ DG F+ +
Sbjct: 32 VAASQSNGDRFKIEGRAIVPGVKTQDW------ISTARVLVEGEEYVGFLKTDGSFAVND 85
Query: 155 MSAGTHLIEVAAIGYFFSPVRVDVSARHPGKVQAALT---ETRRGLNELVLEQLR---EE 208
+ +G++++E+ + + F PVRVD++++ GK++A L +T + + Q+R
Sbjct: 86 VPSGSYVVEIVSPSFRFEPVRVDITSK--GKMRARLVNYIKTSEVIRQPYPLQIRAGGPH 143
Query: 209 QYYEIREPFSIMSLVKSPMGLMMGFMLVVVFLMPKLMENMDPEEMRRAQEE 259
Y+ RE + + +PM +MM L+++ L+PK++ DP EMR+ E+
Sbjct: 144 TYFMKRETWGWTDFLMNPMVMMMVLPLLIIVLLPKVVNTNDP-EMRKEMEQ 193
>sp|Q54ST6|Y5281_DICDI ER membrane protein complex subunit 7 homolog OS=Dictyostelium
discoideum GN=DDB_G0282229 PE=3 SV=2
Length = 216
Score = 71.2 bits (173), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 82/159 (51%), Gaps = 7/159 (4%)
Query: 119 KAFGSPGGKASNVKVVLNG----GEHVTFLRPDGYFSFQNMSAGTHLIEVAAIGYFFSPV 174
K F K S+ +V L E V DG FSF NMS G + +E+ ++ Y F
Sbjct: 47 KLFAPNDAKFSSYRVKLRDINTFNEIVQIPTKDGIFSFVNMSNGLYSLEIESMQYNFPHF 106
Query: 175 RVDVSARHPGKVQAALTETRRGLNELVLEQLREEQYYEIREPFSIMSLVKSPMGLMMGFM 234
+VDV ++ KV+ A ET L ++ +++ PFSI SLV++PM + + F
Sbjct: 107 KVDVLGKNKIKVRPAENETSILPLPLQIKATHRIPFFQQHVPFSIFSLVQNPMAISVLFT 166
Query: 235 LVVVFLMPKLMENMDPEEMRRAQEEMRSQGVPSLANLIP 273
++FL+PK+M ++ +E +E +++ P+L +P
Sbjct: 167 CALIFLLPKMMSFIEQDE--ETKEALKA-STPALVQQLP 202
>sp|Q8WQG1|YLC1_CAEEL ER membrane protein complex subunit 7 homolog OS=Caenorhabditis
elegans GN=C35D10.1 PE=3 SV=1
Length = 222
Score = 54.7 bits (130), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 99/192 (51%), Gaps = 16/192 (8%)
Query: 76 KSVLSVFFINLFLSLVSSAVAVSSGSGDGFSISGRVKLPGMSLKAFGSPGGKASNVKVVL 135
KS+L +F + + L + V+ + + FS+ G + LP A S G + + L
Sbjct: 2 KSILLLFSL-IVLGSATEEVSRTEQTSTLFSVEGEIALPSTRNCAKWSAGAR-----IHL 55
Query: 136 NGGEHVTFLRPDGYFSFQNMSAGTHLIEVAAIGYFFSPVRVDVSARHPGKVQAALTETRR 195
N G+++ F+R D F + GT+++++ + F P+RVD++++ GK++A +
Sbjct: 56 NHGQYMGFVRQDCTFRVDFVPTGTYIVQIENTDFVFEPIRVDITSK--GKMRARKLTILQ 113
Query: 196 GLN------ELVLEQLREEQYYEIREPFSIMSLVKSPMGLMMGFMLVVVFLMPKLMENMD 249
N L L +Y+ RE + I ++ SPM LM+ LVV+ ++PK+ N D
Sbjct: 114 PNNVNTLPYPLRLSARGPARYFRKREEWRITDMLFSPMVLMLVVPLVVMLILPKMTAN-D 172
Query: 250 PEEMRRAQEEMR 261
P E+++ E M+
Sbjct: 173 P-ELKKEMENMQ 183
>sp|O94694|YG1A_SCHPO UPF0620 protein C83.10 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=SPBC83.10 PE=3 SV=1
Length = 189
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 77/154 (50%), Gaps = 19/154 (12%)
Query: 113 LPGMSLKAFGSPGGKASNVKVVLNGGEHVTFLRPDGYFSFQNMSAGTHLIEVAAIGYFFS 172
LP ++L ++ + +++ + T + DG F+F N+ + + + +I Y FS
Sbjct: 36 LPKINLLSYDT------RARLISSNKTFETVVERDGSFTFPNVPDEIYFLRLESIDYEFS 89
Query: 173 PVRVDVSA-------RHPGKVQAALTETRRGLNELVLEQLREEQYYEIREP--FSIMSLV 223
+ ++ P + + A + + + + + + Y ++EP FS++ L+
Sbjct: 90 EFHIIINESIVYPYYTSPAEKRPASSTAKNTSYPIKVRAVLKRDY--LKEPRKFSLIRLL 147
Query: 224 KSPMGLMMGFMLVVVFLMPKLMENMDPEEMRRAQ 257
KSPM L+ +V+VF++PKL N++ + + +A+
Sbjct: 148 KSPMMLLSLASVVLVFILPKL--NIEAKALEQAR 179
>sp|Q5F297|S35G3_MOUSE Solute carrier family 35 member G3 OS=Mus musculus GN=Slc35g3
PE=2 SV=2
Length = 340
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 11/56 (19%)
Query: 6 HHHRCVPSSANQ--------GGTSDGDVSKKSELAHRSVLHNLRNREQL-FPCKFH 52
HHHRC PS+A + GG S G V S +A+++ L + E L F C FH
Sbjct: 29 HHHRCGPSNATKGLFVALLGGGLSAGFVGPFSRMAYQT--SQLPSLELLIFRCLFH 82
>sp|Q7NHX6|PCP_GLOVI Pyrrolidone-carboxylate peptidase OS=Gloeobacter violaceus (strain
PCC 7421) GN=pcp PE=3 SV=1
Length = 205
Score = 32.7 bits (73), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 168 GYFFSPVRVDVSARHPGKVQAALTETRRGLNELVLEQLREEQ 209
G+ P + + R+PGK L T RG+ E+VLE LR EQ
Sbjct: 162 GFIHIPYLPEQAVRYPGKASMELATTLRGI-EMVLEVLRSEQ 202
>sp|A4HK17|SEY1_LEIBR Protein SEY1 homolog OS=Leishmania braziliensis GN=LbrM32_V2.0440
PE=3 SV=2
Length = 891
Score = 32.3 bits (72), Expect = 3.9, Method: Composition-based stats.
Identities = 33/122 (27%), Positives = 53/122 (43%), Gaps = 14/122 (11%)
Query: 89 SLVSSAVAVSSGSG--DGFSISGRVKLPGMSLKAFGSPGGKASNVKVVLNG--GEHVTFL 144
S+V+ +V+ S GS DG +G ++ G++ G GG++S +LN G H L
Sbjct: 24 SIVAPSVSPSRGSATADGDYGNGALEAVGLNYHVVGVFGGQSSGKSTLLNHLFGTHFQML 83
Query: 145 ---------RPDGYFSFQNMS-AGTHLIEVAAIGYFFSPVRVDVSARHPGKVQAALTETR 194
+ + N + AG +VA + +P D S+R V AA+T
Sbjct: 84 DETVRRGQTTKGAFMALANTALAGLEASDVAVVAPRLAPSAADRSSRLNHAVAAAVTNNT 143
Query: 195 RG 196
G
Sbjct: 144 TG 145
>sp|Q5JPE7|NOMO2_HUMAN Nodal modulator 2 OS=Homo sapiens GN=NOMO2 PE=1 SV=1
Length = 1267
Score = 32.0 bits (71), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 32/80 (40%), Gaps = 9/80 (11%)
Query: 104 GFSISGRVKLPGMSLKAFGSPGGKASNVKVVLNGGEHVTFLRPDGYFSFQNMSAGTHLIE 163
GFS++GRV P G VV + + DG F +N++ GT+ I
Sbjct: 328 GFSVTGRV---------LNGPEGDGVPEAVVTLNNQIKVKTKADGSFRLENITTGTYTIH 378
Query: 164 VAAIGYFFSPVRVDVSARHP 183
+F V + ++ P
Sbjct: 379 AQKEHLYFETVTIKIAPNTP 398
>sp|Q6GQT9|NOMO1_MOUSE Nodal modulator 1 OS=Mus musculus GN=Nomo1 PE=1 SV=1
Length = 1214
Score = 32.0 bits (71), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 9/80 (11%)
Query: 104 GFSISGRVKLPGMSLKAFGSPGGKASNVKVVLNGGEHVTFLRPDGYFSFQNMSAGTHLIE 163
GFS++GRV P G+ VV + + DG F +N++ GT+ I
Sbjct: 320 GFSVTGRV---------LNGPDGEGVPEAVVTLNNQIKVKTKADGSFRLENITTGTYTIH 370
Query: 164 VAAIGYFFSPVRVDVSARHP 183
+F V + ++ P
Sbjct: 371 AQKEHLYFEMVTIKIAPNTP 390
>sp|Q15155|NOMO1_HUMAN Nodal modulator 1 OS=Homo sapiens GN=NOMO1 PE=1 SV=5
Length = 1222
Score = 32.0 bits (71), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 32/80 (40%), Gaps = 9/80 (11%)
Query: 104 GFSISGRVKLPGMSLKAFGSPGGKASNVKVVLNGGEHVTFLRPDGYFSFQNMSAGTHLIE 163
GFS++GRV P G VV + + DG F +N++ GT+ I
Sbjct: 328 GFSVTGRV---------LNGPEGDGVPEAVVTLNNQIKVKTKADGSFRLENITTGTYTIH 378
Query: 164 VAAIGYFFSPVRVDVSARHP 183
+F V + ++ P
Sbjct: 379 AQKEHLYFETVTIKIAPNTP 398
>sp|P69849|NOMO3_HUMAN Nodal modulator 3 OS=Homo sapiens GN=NOMO3 PE=2 SV=2
Length = 1222
Score = 32.0 bits (71), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 32/80 (40%), Gaps = 9/80 (11%)
Query: 104 GFSISGRVKLPGMSLKAFGSPGGKASNVKVVLNGGEHVTFLRPDGYFSFQNMSAGTHLIE 163
GFS++GRV P G VV + + DG F +N++ GT+ I
Sbjct: 328 GFSVTGRV---------LNGPEGDGVPEAVVTLNNQIKVKTKADGSFRLENITTGTYTIH 378
Query: 164 VAAIGYFFSPVRVDVSARHP 183
+F V + ++ P
Sbjct: 379 AQKEHLYFETVTIKIAPNTP 398
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.134 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,544,089
Number of Sequences: 539616
Number of extensions: 3822993
Number of successful extensions: 10943
Number of sequences better than 100.0: 24
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 10915
Number of HSP's gapped (non-prelim): 28
length of query: 278
length of database: 191,569,459
effective HSP length: 116
effective length of query: 162
effective length of database: 128,974,003
effective search space: 20893788486
effective search space used: 20893788486
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)