Query 023727
Match_columns 278
No_of_seqs 152 out of 251
Neff 4.8
Searched_HMMs 29240
Date Mon Mar 25 11:46:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023727.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023727hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1uwy_A Carboxypeptidase M; met 98.4 2.9E-07 9.9E-12 88.6 6.8 91 104-204 295-391 (426)
2 3mn8_A LP15968P; catalytic dom 98.3 1E-06 3.5E-11 85.2 8.0 91 105-205 337-431 (435)
3 2nsm_A Carboxypeptidase N cata 98.3 1.3E-06 4.4E-11 84.2 8.1 93 104-207 320-413 (439)
4 1h8l_A Carboxypeptidase GP180 98.2 3E-06 1E-10 80.0 9.0 67 104-180 300-367 (380)
5 1nkg_A Rhamnogalacturonase B; 98.2 2.7E-06 9.2E-11 84.4 8.8 69 101-181 254-325 (508)
6 3kcp_A Cellulosomal-scaffoldin 97.3 0.00077 2.6E-08 63.5 9.3 74 100-175 153-228 (321)
7 3qec_A Putative carbohydrate b 94.9 0.018 6.1E-07 48.8 3.7 26 140-165 89-114 (150)
8 3irp_X URO-adherence factor A; 94.9 0.043 1.5E-06 53.2 7.0 73 102-175 303-381 (429)
9 1xpn_A Hypothetical protein PA 94.8 0.027 9.2E-07 48.6 4.5 26 140-165 109-134 (170)
10 2xsu_A Catechol 1,2 dioxygenas 88.2 1.7 5.8E-05 40.6 8.6 50 103-161 135-202 (312)
11 2boy_A 3-chlorocatechol 1,2-di 88.2 0.76 2.6E-05 41.7 6.0 54 100-162 98-169 (254)
12 2azq_A Catechol 1,2-dioxygenas 87.0 1.9 6.4E-05 40.3 8.1 52 101-161 129-198 (311)
13 2pz4_A Protein GBS052; SPAB, G 86.4 1.5 5.2E-05 38.4 6.8 41 141-181 175-219 (239)
14 2x5p_A FBA2, fibronectin bindi 85.6 1.9 6.7E-05 34.7 6.5 57 128-187 42-104 (121)
15 1ti6_B Pyrogallol hydroxytrans 84.7 2.3 7.8E-05 38.4 7.3 37 141-178 226-262 (274)
16 2d7n_A Filamin-C; beta-sandwic 84.6 1.1 3.9E-05 34.3 4.5 45 144-188 42-90 (93)
17 3pe9_A Fibronectin(III)-like m 83.1 5.1 0.00017 31.0 7.7 56 103-169 17-72 (98)
18 2bum_B Protocatechuate 3,4-dio 81.5 2.2 7.4E-05 38.4 5.7 53 101-162 75-150 (241)
19 1tmx_A Hydroxyquinol 1,2-dioxy 79.4 2.5 8.6E-05 39.1 5.5 52 102-162 131-199 (293)
20 2ww8_A RRGA, cell WALL surface 79.2 6.2 0.00021 41.5 9.1 53 128-180 62-123 (893)
21 1dmh_A 1,2-CTD, catechol 1,2-d 79.1 2.8 9.7E-05 39.1 5.8 52 102-162 130-202 (311)
22 3th1_A Chlorocatechol 1,2-diox 78.3 3.9 0.00013 37.2 6.4 52 101-161 96-165 (260)
23 3t63_A 3,4-PCD, protocatechuat 77.4 3.6 0.00012 36.0 5.6 54 100-162 44-116 (200)
24 3t63_M 3,4-PCD, protocatechuat 75.9 3.7 0.00013 36.9 5.5 54 100-162 73-149 (238)
25 4ank_A Transthyretin; hormone 74.7 6.5 0.00022 32.9 6.3 57 105-169 30-98 (147)
26 2bum_A Protocatechuate 3,4-dio 74.5 4.4 0.00015 35.5 5.5 53 100-161 48-124 (209)
27 3pdd_A Glycoside hydrolase, fa 73.4 13 0.00044 31.4 8.0 66 103-179 17-87 (190)
28 2pz4_A Protein GBS052; SPAB, G 73.0 1.8 6.1E-05 38.0 2.6 39 141-179 71-112 (239)
29 3o5u_A Chlorocatechol 1,2-diox 72.9 5.7 0.0002 36.1 5.9 52 101-161 100-170 (257)
30 2k7p_A Filamin-A; IG-like, ABP 72.4 13 0.00043 31.3 7.7 45 145-189 55-103 (188)
31 3kpt_A Collagen adhesion prote 71.8 4.6 0.00016 37.6 5.2 54 128-181 266-342 (355)
32 3n9t_A PNPC; phospholipid bind 69.5 8.1 0.00028 35.7 6.2 53 101-162 126-196 (290)
33 3pdd_A Glycoside hydrolase, fa 68.6 19 0.00066 30.3 8.1 57 102-169 108-164 (190)
34 4fxt_A Uncharacterized protein 68.3 15 0.00052 32.2 7.5 71 103-180 6-86 (202)
35 3hhy_A 1,2-CTD, catechol 1,2-d 67.9 9.3 0.00032 35.1 6.2 50 103-161 130-197 (280)
36 3kpt_A Collagen adhesion prote 67.5 3 0.0001 38.8 2.9 69 107-180 6-83 (355)
37 2ds4_A Tripartite motif protei 63.9 10 0.00035 28.6 4.9 36 145-180 72-111 (113)
38 3hn5_A Putative exported prote 63.9 22 0.00074 31.5 7.6 72 103-180 9-91 (215)
39 3v9f_A Two-component system se 62.8 8.1 0.00028 38.2 5.2 34 135-168 724-758 (781)
40 4a2l_A BT_4663, two-component 61.2 7.3 0.00025 38.6 4.5 29 140-168 736-764 (795)
41 2dj4_A Filamin-B; beta-sandwic 60.9 12 0.00042 28.5 4.9 37 144-180 63-103 (108)
42 2ee9_A Filamin-B; beta-sandwic 58.9 17 0.00057 27.9 5.3 38 144-181 50-91 (95)
43 2dib_A Filamin-B; beta-sandwic 57.5 7.4 0.00025 30.5 3.2 37 144-180 77-117 (128)
44 3rgh_A Filamin-A; cell adhesio 55.5 14 0.00047 28.0 4.3 36 144-179 59-98 (100)
45 3ott_A Two-component system se 54.6 11 0.00038 37.1 4.5 28 141-168 702-730 (758)
46 2x9x_A RRGB, cell WALL surface 54.1 7.9 0.00027 37.3 3.3 52 129-180 180-245 (444)
47 2d7m_A Filamin-C; beta-sandwic 54.1 20 0.0007 27.5 5.2 37 144-180 64-104 (115)
48 2dia_A Filamin-B; beta-sandwic 52.3 18 0.0006 27.8 4.5 38 143-180 61-102 (113)
49 3fcg_A F1 capsule-anchoring pr 50.3 82 0.0028 24.0 7.9 29 129-157 27-55 (90)
50 2p9r_A Alpha-2-M, alpha-2-macr 49.9 74 0.0025 23.4 9.2 59 102-167 16-85 (102)
51 2w0p_A Filamin-A; alternative 49.7 20 0.0007 26.5 4.4 38 142-179 50-91 (94)
52 1v05_A Filamin C; actin-bindin 49.4 20 0.00069 26.5 4.3 26 144-169 57-84 (96)
53 3pf2_A Cell WALL surface ancho 48.6 21 0.00073 32.9 5.2 39 143-181 241-293 (319)
54 2hsi_A Putative peptidase M23; 46.9 69 0.0024 29.0 8.2 47 131-178 51-102 (282)
55 2qsq_A Carcinoembryonic antige 46.4 48 0.0016 25.0 6.1 32 142-173 66-100 (111)
56 3cnk_A Filamin-A; FLNA24, X-RA 46.3 19 0.00064 26.3 3.6 34 145-178 51-88 (89)
57 2x9x_A RRGB, cell WALL surface 46.2 11 0.00037 36.4 2.9 42 140-181 370-415 (444)
58 2dic_A Filamin-B; beta-sandwic 45.5 31 0.001 26.2 4.9 38 143-180 59-100 (105)
59 2xtl_A Cell WALL surface ancho 45.1 9.8 0.00033 36.9 2.4 40 142-181 378-421 (452)
60 2bp3_A Filamin A; structural p 43.9 30 0.001 25.6 4.6 38 142-179 53-94 (97)
61 2ki0_A DS119; beta-alpha-beta, 43.8 14 0.00046 23.6 2.1 16 249-264 13-28 (36)
62 2dlg_A Filamin-B; beta-sandwic 43.5 30 0.001 26.5 4.6 38 144-181 51-92 (102)
63 2e9j_A Filamin-B; beta-sandwic 43.4 22 0.00076 27.5 3.8 36 145-180 75-114 (119)
64 2di8_A Filamin-B; beta-sandwic 43.0 36 0.0012 26.2 5.0 38 143-180 59-100 (111)
65 2dmb_A Filamin-B; beta-sandwic 42.9 30 0.001 27.2 4.6 36 145-180 64-103 (124)
66 2d7o_A Filamin-C; beta-sandwic 42.7 32 0.0011 26.4 4.6 39 143-181 59-101 (111)
67 3uaf_A TTR-52; beta barrel/san 42.0 38 0.0013 27.0 5.1 45 102-154 2-56 (117)
68 2wz8_A Cellulosome protein doc 41.6 41 0.0014 27.6 5.3 45 137-181 34-95 (156)
69 2nqc_A Filamin-C; immunoglobul 41.3 1.3E+02 0.0044 24.2 8.3 49 131-180 78-134 (138)
70 2g2n_A Transthyretin-like prot 40.6 69 0.0024 25.5 6.4 43 128-170 19-72 (114)
71 3osv_A Flagellar basal-BODY RO 39.0 1.1E+02 0.0037 24.3 7.4 40 128-167 36-90 (138)
72 2eec_A Filamin-B; beta-sandwic 38.6 1.1E+02 0.0036 24.1 7.2 39 141-180 67-110 (125)
73 2y1v_A RRGB, cell WALL surface 37.0 15 0.00052 36.8 2.4 40 142-181 527-570 (605)
74 4b7l_A Filamin-B; structural p 37.0 91 0.0031 28.8 7.6 27 145-171 310-338 (347)
75 2d7p_A Filamin-C; beta-sandwic 36.7 54 0.0018 25.3 5.1 37 145-181 62-102 (112)
76 2hr0_A Complement C3 beta chai 36.3 45 0.0016 32.7 5.7 38 130-168 364-406 (645)
77 2eea_A Filamin-B; beta-sandwic 36.1 43 0.0015 25.7 4.4 38 143-180 69-110 (115)
78 3g3l_A Putative uncharacterize 36.1 38 0.0013 30.6 4.6 72 102-186 12-83 (327)
79 2k9u_A Gamma filamin; cytoskel 35.7 48 0.0016 25.6 4.7 38 143-180 66-107 (119)
80 3bwu_D FIMD, outer membrane us 35.4 58 0.002 25.3 5.1 37 154-190 27-64 (125)
81 3l48_A Outer membrane usher pr 35.1 70 0.0024 24.2 5.4 49 109-166 12-60 (94)
82 3qva_A Transthyretin-like prot 35.1 75 0.0026 25.4 5.8 43 128-170 25-73 (116)
83 2pkd_A SLAM family member 5; s 34.4 1E+02 0.0036 22.9 6.3 38 142-179 66-109 (111)
84 2k7q_A Filamin-A; IG-like, ABP 33.9 2E+02 0.0067 23.7 8.9 36 145-180 52-91 (191)
85 2k7q_A Filamin-A; IG-like, ABP 33.5 35 0.0012 28.4 3.7 39 142-180 144-186 (191)
86 2ee6_A Filamin-B; beta-sandwic 32.5 36 0.0012 25.7 3.4 37 144-180 60-100 (105)
87 1lkk_A Human P56 tyrosine kina 30.8 52 0.0018 24.4 4.0 23 145-167 25-49 (105)
88 2di9_A Filamin-B; beta-sandwic 30.3 59 0.002 25.6 4.4 38 143-180 79-120 (131)
89 4g9s_B Inhibitor of G-type lys 28.8 1.5E+02 0.0051 22.5 6.5 33 103-137 14-46 (111)
90 1blj_A P55 BLK protein tyrosin 27.9 60 0.002 24.5 4.0 35 145-179 33-72 (114)
91 2xet_A CAF1A usher, F1 capsule 27.6 1.3E+02 0.0043 22.1 5.6 42 109-158 6-48 (89)
92 3ncx_A Intimin, intimin adhere 27.5 64 0.0022 28.1 4.4 70 103-175 9-90 (189)
93 2k7p_A Filamin-A; IG-like, ABP 27.5 2E+02 0.0069 23.7 7.5 49 131-179 130-185 (188)
94 2x9z_A RRGB, cell WALL surface 26.9 33 0.0011 30.4 2.6 29 144-172 198-228 (262)
95 2ww8_A RRGA, cell WALL surface 26.3 29 0.00098 36.5 2.3 39 142-180 781-825 (893)
96 3hr6_A SPAA, putative surface- 25.7 48 0.0016 31.8 3.6 38 141-178 80-121 (436)
97 1qfh_A Protein (gelation facto 25.4 87 0.003 26.2 4.9 37 144-180 64-104 (212)
98 1nrv_A Growth factor receptor- 24.7 95 0.0033 23.0 4.5 32 146-178 27-60 (105)
99 2k6l_A Putative uncharacterize 23.5 23 0.00078 24.8 0.7 25 16-40 24-48 (51)
100 2ptt_B Natural killer cell rec 22.8 1.7E+02 0.0056 23.5 5.7 28 141-168 68-98 (112)
101 2edo_A CD48 antigen; beta-sand 22.6 1E+02 0.0034 23.0 4.3 38 143-180 68-110 (121)
102 1d4t_A T cell signal transduct 22.3 1.1E+02 0.0037 22.6 4.4 32 146-178 25-58 (104)
103 2dru_A Chimera of CD48 antigen 22.0 1.3E+02 0.0046 23.6 5.2 36 145-180 66-104 (180)
104 4dzg_A PLIG; lysozyme inhibito 21.9 87 0.003 24.4 3.9 63 103-167 16-95 (114)
105 3iwv_A 5-hydroxyisourate hydro 21.6 1.5E+02 0.0053 24.3 5.5 43 128-170 41-96 (138)
106 2aug_A Growth factor receptor- 21.4 1.2E+02 0.0041 23.6 4.7 32 146-178 48-81 (126)
107 2lnw_A VAV-2, guanine nucleoti 21.2 1.4E+02 0.0047 23.1 5.0 32 145-177 41-74 (122)
108 1rja_A Tyrosine-protein kinase 21.0 97 0.0033 22.8 3.9 33 145-178 23-57 (100)
109 1ib8_A Conserved protein SP14. 20.9 39 0.0013 28.2 1.7 14 157-170 77-90 (164)
110 2dmc_A Filamin-B; beta-sandwic 20.8 99 0.0034 24.0 4.0 37 145-181 66-106 (116)
111 2blf_A SORA, sulfite\:cytochro 20.7 1.4E+02 0.0048 28.0 5.7 29 104-142 280-308 (373)
112 2gtq_A Aminopeptidase N; alani 20.5 1E+02 0.0034 32.1 5.0 63 102-166 29-92 (867)
113 3k2m_A Proto-oncogene tyrosine 20.5 1.3E+02 0.0044 22.5 4.5 32 146-178 25-58 (112)
114 2iug_A Phosphatidylinositol 3- 20.4 1.2E+02 0.0041 23.2 4.4 33 145-178 30-65 (120)
115 2w9x_A AXE2A, CJCE2B, putative 20.4 34 0.0011 31.2 1.3 20 149-168 96-115 (366)
No 1
>1uwy_A Carboxypeptidase M; metallopeptidase, GPI-anchor, metalloprotease, zinc, lipoprotein, hydrolase, structural proteomics in europe, spine; HET: NAG; 3.0A {Homo sapiens} SCOP: b.3.2.1 c.56.5.1
Probab=98.41 E-value=2.9e-07 Score=88.58 Aligned_cols=91 Identities=16% Similarity=0.084 Sum_probs=62.8
Q ss_pred ceEEEEEEECCCCCCCCCCCCCCCceeEEEEEcCceeE--EEecCCccEEEccCCCeeEEEEEEecCcceeeEEEEEEcC
Q 023727 104 GFSISGRVKLPGMSLKAFGSPGGKASNVKVVLNGGEHV--TFLRPDGYFSFQNMSAGTHLIEVAAIGYFFSPVRVDVSAR 181 (278)
Q Consensus 104 ~~tIsGrV~~p~~~p~~~~lp~~~~s~t~V~L~g~~~~--a~~~~dG~F~f~nVP~GsY~LeVss~gy~F~p~RVdV~~~ 181 (278)
+.+|+|+|...++.| ++.++|.+.|.... +.+|.||.|.+ ++++|+|+|.|++.||......|.|...
T Consensus 295 ~~~I~G~V~D~~g~p---------i~gA~V~v~g~~~~~~~~Td~~G~y~~-~l~~G~Y~l~vs~~Gy~~~~~~v~v~~~ 364 (426)
T 1uwy_A 295 HLGVKGQVFDQNGNP---------LPNVIVEVQDRKHICPYRTNKYGEYYL-LLLPGSYIINVTVPGHDPHITKVIIPEK 364 (426)
T ss_dssp GCSEEEEEECTTSCB---------CCSCEEEETTCCCSSCCBCCTTCEEEE-CCCSEEEEEEEECSSSCCEEEEEEECSS
T ss_pred cceeEEEEECCCCCc---------cCceEEEEEeccccceeEeCCCCEEEe-ccCCeeEEEEEEEcCcccEEEEEEEeCC
Confidence 356999998765544 67899999998877 99999999998 6999999999999999888877888653
Q ss_pred C----CCceEEEEecccCccccEEEEe
Q 023727 182 H----PGKVQAALTETRRGLNELVLEQ 204 (278)
Q Consensus 182 ~----~G~VrA~~~e~~~~l~PLvv~p 204 (278)
. ...+...+.+....+.++++++
T Consensus 365 ~~~~~~~~~~~~L~~~~~~l~evv~~~ 391 (426)
T 1uwy_A 365 SQNFSALKKDILLPFQGQLDSIPVSNP 391 (426)
T ss_dssp CSSSSCEECCEECSSCC---------C
T ss_pred CccccceEEEEEEecCCccccceeecc
Confidence 2 1123334444444556777765
No 2
>3mn8_A LP15968P; catalytic domain of alpha/beta-hydrolase fold, C-terminal, A transthyretin-like domain, hydrolase; HET: NAG GEM; 2.70A {Drosophila melanogaster}
Probab=98.31 E-value=1e-06 Score=85.18 Aligned_cols=91 Identities=16% Similarity=0.181 Sum_probs=61.6
Q ss_pred eEEEEEEECCCCCCCCCCCCCCCceeEEEEEcCc-eeEEEecCCccEEEccCCCeeEEEEEEecCc-ceeeEEEEEEcCC
Q 023727 105 FSISGRVKLPGMSLKAFGSPGGKASNVKVVLNGG-EHVTFLRPDGYFSFQNMSAGTHLIEVAAIGY-FFSPVRVDVSARH 182 (278)
Q Consensus 105 ~tIsGrV~~p~~~p~~~~lp~~~~s~t~V~L~g~-~~~a~~~~dG~F~f~nVP~GsY~LeVss~gy-~F~p~RVdV~~~~ 182 (278)
..|+|+|+..++.| ++.++|.+.|. ...+.+|.+|.|.+ .+++|+|+|.|++.|| ......|.|....
T Consensus 337 ~gv~G~V~D~~G~p---------i~gA~V~v~g~~~~~~~Td~~G~y~~-~l~pG~Y~l~vs~~Gy~~~~~~~v~v~~~~ 406 (435)
T 3mn8_A 337 IGIKGLVTDASGFP---------IADANVYVAGLEEKPMRTSKRGEYWR-LLTPGLYSVHASAFGYQTSAPQQVRVTNDN 406 (435)
T ss_dssp SSEEEEEECSSSCB---------CTTCEEEETTCTTSCEECCTTCEEEE-CCCSEEEEEEEEBTTBCCCCCEEEEECCCS
T ss_pred ceeEEEEECCCCCc---------cCceEEEEecccccceEeCCCCeEEE-ecCCCcEEEEEEEcccccceEEEEEEecCC
Confidence 35999998775554 67899999994 88899999999977 5999999999999999 7778888887542
Q ss_pred CC--ceEEEEecccCccccEEEEec
Q 023727 183 PG--KVQAALTETRRGLNELVLEQL 205 (278)
Q Consensus 183 ~G--~VrA~~~e~~~~l~PLvv~p~ 205 (278)
.. .+...+.+....+.++.++|.
T Consensus 407 ~~~~~~~~~L~~~~~~L~~v~~~~~ 431 (435)
T 3mn8_A 407 QEALRLDFKLAPVETNFDGISSFYS 431 (435)
T ss_dssp SSCEECCEECCBC------------
T ss_pred cceeEEEEEEeecCCCCCeeEeccC
Confidence 11 244444444445566666553
No 3
>2nsm_A Carboxypeptidase N catalytic chain; caroxypeptidase, zinc peptidase, transthyretin-like domain, processing, peptide modification, hydrolase; HET: NAG; 2.10A {Homo sapiens}
Probab=98.29 E-value=1.3e-06 Score=84.18 Aligned_cols=93 Identities=19% Similarity=0.130 Sum_probs=59.9
Q ss_pred ceEEEEEEECCCCCCCCCCCCCCCceeEEEEEcCceeEEEecCCccEEEccCCCeeEEEEEEecCcceeeEEEEE-EcCC
Q 023727 104 GFSISGRVKLPGMSLKAFGSPGGKASNVKVVLNGGEHVTFLRPDGYFSFQNMSAGTHLIEVAAIGYFFSPVRVDV-SARH 182 (278)
Q Consensus 104 ~~tIsGrV~~p~~~p~~~~lp~~~~s~t~V~L~g~~~~a~~~~dG~F~f~nVP~GsY~LeVss~gy~F~p~RVdV-~~~~ 182 (278)
...|+|+|...++.| ++.++|.+.|....+.+|.+|.|.+ ++|+|+|+|.|++.||......|.| ....
T Consensus 320 ~~~i~G~V~D~~g~p---------i~gA~V~v~~~~~~~~Td~~G~y~~-~l~~G~Y~l~vs~~Gy~~~~~~v~v~~~~~ 389 (439)
T 2nsm_A 320 HQGIKGMVLDQNYNN---------LANAVISVSGINHDVTSGDHGDYFR-LLLPGIYTVSATAPGYDPETVTVTVGPAEP 389 (439)
T ss_dssp SCSEEEEEECTTSCB---------CTTCEEEETTEEEEEECCTTSEEEE-CCCSEEEEEEEECTTEECEEEEEEECSSSC
T ss_pred ccceEEEEEcCCCCC---------ccceEEEEEcccceeEECCCCeEEE-ccCCeeEEEEEEecCceeEEEEEEEecCCc
Confidence 357999998765544 6789999999888999999999987 6999999999999999888888888 3221
Q ss_pred CCceEEEEecccCccccEEEEeccc
Q 023727 183 PGKVQAALTETRRGLNELVLEQLRE 207 (278)
Q Consensus 183 ~G~VrA~~~e~~~~l~PLvv~p~~~ 207 (278)
......+......+.++++.+...
T Consensus 390 -~~~~~~L~~~~~~L~eVvV~~~~~ 413 (439)
T 2nsm_A 390 -TLVNFHLKRSIPQVSPVRRAPSRR 413 (439)
T ss_dssp -EECCEECEEC--------------
T ss_pred -ceEeEEEccCCCccccEEEecCCC
Confidence 111122222333456777766444
No 4
>1h8l_A Carboxypeptidase GP180 residues 503-882; hydrolase, zinc-dependent protease; HET: NAG BMA NDG GEM; 2.6A {Lophonetta specularioides} SCOP: b.3.2.1 c.56.5.1 PDB: 1qmu_A*
Probab=98.23 E-value=3e-06 Score=79.96 Aligned_cols=67 Identities=21% Similarity=0.092 Sum_probs=57.8
Q ss_pred ceEEEEEEECC-CCCCCCCCCCCCCceeEEEEEcCceeEEEecCCccEEEccCCCeeEEEEEEecCcceeeEEEEEEc
Q 023727 104 GFSISGRVKLP-GMSLKAFGSPGGKASNVKVVLNGGEHVTFLRPDGYFSFQNMSAGTHLIEVAAIGYFFSPVRVDVSA 180 (278)
Q Consensus 104 ~~tIsGrV~~p-~~~p~~~~lp~~~~s~t~V~L~g~~~~a~~~~dG~F~f~nVP~GsY~LeVss~gy~F~p~RVdV~~ 180 (278)
..+|+|+|..+ .+.| ++.++|.+.+....+.+|.+|.|.+ ++++|+|+|.|++.||......|.|..
T Consensus 300 ~~~i~G~V~D~~~g~p---------i~~A~V~v~~~~~~~~Td~~G~y~~-~l~~G~Y~l~vs~~Gy~~~~~~v~v~~ 367 (380)
T 1h8l_A 300 HRGIWGFVLDATDGRG---------ILNATISVADINHPVTTYKDGDYWR-LLVQGTYKVTASARGYDPVTKTVEVDS 367 (380)
T ss_dssp GCEEEEEEEETTTCSB---------CTTCEEEETTEEEEEECCTTSEEEE-CCCSEEEEEEEECTTBCCEEEEEEECS
T ss_pred cccceEEEEeCCCCCc---------cCceEEEEecCcceeEECCCEEEEE-ecCCCcEEEEEEEcCccceEEEEEEcC
Confidence 36899999876 4443 5789999999888999999999988 699999999999999998887787764
No 5
>1nkg_A Rhamnogalacturonase B; polysaccharide lyase, carbohydrate active enzyme, pectin, LY; 1.50A {Aspergillus aculeatus} SCOP: b.3.1.2 b.18.1.25 b.30.5.10 PDB: 2xhn_A* 3njv_A* 3njx_A
Probab=98.22 E-value=2.7e-06 Score=84.40 Aligned_cols=69 Identities=22% Similarity=0.169 Sum_probs=57.3
Q ss_pred CCCceEEEEEEECCCCCCCCCCCCCCCceeEEEEE---cCceeEEEecCCccEEEccCCCeeEEEEEEecCcceeeEEEE
Q 023727 101 SGDGFSISGRVKLPGMSLKAFGSPGGKASNVKVVL---NGGEHVTFLRPDGYFSFQNMSAGTHLIEVAAIGYFFSPVRVD 177 (278)
Q Consensus 101 ~~~~~tIsGrV~~p~~~p~~~~lp~~~~s~t~V~L---~g~~~~a~~~~dG~F~f~nVP~GsY~LeVss~gy~F~p~RVd 177 (278)
+.++.+|+|+|. +.+ .....|++ ++.+|||.+|++|+|+|.||+||+|.|.+...++.+....|.
T Consensus 254 ~~~RGtVsG~V~---G~~---------~~~~avv~~~~k~~qywt~td~~G~FtI~~V~pGtY~L~a~~~G~~~~~~~Vt 321 (508)
T 1nkg_A 254 ASGRGKVAGTAS---GAD---------SSMDWVVHWYNDAAQYWTYTSSSGSFTSPAMKPGTYTMVYYQGEYAVATSSVT 321 (508)
T ss_dssp GGGCBEEEEEEE---SSC---------TTSCEEEEEECSSCEEEEECCTTCEEECCCBCSEEEEEEEEETTEEEEEEEEE
T ss_pred cccccEEEEEEc---Ccc---------CCceEEEEEcCCCceeEEEECCCCcEEeCCcCCceEEEEEEECceEEEEeEEE
Confidence 457799999998 322 12244555 578999999999999999999999999999999999999999
Q ss_pred EEcC
Q 023727 178 VSAR 181 (278)
Q Consensus 178 V~~~ 181 (278)
|.+.
T Consensus 322 V~aG 325 (508)
T 1nkg_A 322 VSAG 325 (508)
T ss_dssp ECTT
T ss_pred EcCC
Confidence 9864
No 6
>3kcp_A Cellulosomal-scaffolding protein A; dockerin, X-module, carbohydrate metabolism, cell WALL biogenesis/degradation; 1.94A {Clostridium thermocellum atcc 27405} PDB: 3p0d_C 4fl4_C 2b59_B
Probab=97.32 E-value=0.00077 Score=63.45 Aligned_cols=74 Identities=19% Similarity=0.257 Sum_probs=57.1
Q ss_pred CCCCceEEEEEEECCCCCCCCCCCCCCCceeEEEEEcCceeEEEecCCccEEEccCCCee--EEEEEEecCcceeeEE
Q 023727 100 GSGDGFSISGRVKLPGMSLKAFGSPGGKASNVKVVLNGGEHVTFLRPDGYFSFQNMSAGT--HLIEVAAIGYFFSPVR 175 (278)
Q Consensus 100 ~~~~~~tIsGrV~~p~~~p~~~~lp~~~~s~t~V~L~g~~~~a~~~~dG~F~f~nVP~Gs--Y~LeVss~gy~F~p~R 175 (278)
...++++|+|-|...-.. ++-..+ ..-+..+|.+.|+...+.+|++|+|+|.+||+|. |+|+++-++|....+.
T Consensus 153 ~~~~~~~vsGYi~~~~~~-~~~~~~-~~~~G~~V~i~gt~~sa~tD~~G~f~I~~vp~~~~~ytl~i~~~g~l~~~i~ 228 (321)
T 3kcp_A 153 PVIEGYKVSGYILPDFSF-DATVAP-LVKAGFKVEIVGTELYAVTDANGYFEITGVPANASGYTLKISRATYLDRVIA 228 (321)
T ss_dssp CCCSSEEEEEEEEESSCC-CTTTHH-HHHSCCEEEETTSSCEEECCTTSEEEEEEECCEEEEEEEEEECTEECCEEEE
T ss_pred CCCCCceEEEEEcccccc-ccccch-hccCCcEEEEEeccceeEECCCceEEEeccCCCCccEEEEEeecCceeeeee
Confidence 345789999999753111 000000 1135689999999999999999999999999998 9999999999988776
No 7
>3qec_A Putative carbohydrate binding protein; suramin binding, heparin binding, possible carbohydrate TRAN biofilm formation; HET: PGE; 2.61A {Pseudomonas aeruginosa}
Probab=94.93 E-value=0.018 Score=48.80 Aligned_cols=26 Identities=23% Similarity=0.406 Sum_probs=23.1
Q ss_pred eEEEecCCccEEEccCCCeeEEEEEE
Q 023727 140 HVTFLRPDGYFSFQNMSAGTHLIEVA 165 (278)
Q Consensus 140 ~~a~~~~dG~F~f~nVP~GsY~LeVs 165 (278)
..+..|.+|.|+|.|||+|.|.|...
T Consensus 89 r~t~cD~~G~F~F~~Lp~G~Yyl~a~ 114 (150)
T 3qec_A 89 REATTDQNGRFDFDHIPNGTYYISSE 114 (150)
T ss_dssp EEEECCTTSEEEEEEECSEEEEEEEE
T ss_pred eEEEeCCCCcEEECCCCCccEEEEEE
Confidence 36889999999999999999988765
No 8
>3irp_X URO-adherence factor A; DEV-IGG fold, cell WALL, hemagglutinin, peptidoglycan-anchor secreted, virulence, cell adhesion; 1.50A {Staphylococcus saprophyticus subsp} PDB: 3irz_A 3is0_X 3is1_X
Probab=94.93 E-value=0.043 Score=53.24 Aligned_cols=73 Identities=21% Similarity=0.256 Sum_probs=50.5
Q ss_pred CCceEEEEEEECCCCCCCCCCCCC-CCceeEEEEEcC--ce--eEEEecCCccEEEccCCCeeEEEEEEec-CcceeeEE
Q 023727 102 GDGFSISGRVKLPGMSLKAFGSPG-GKASNVKVVLNG--GE--HVTFLRPDGYFSFQNMSAGTHLIEVAAI-GYFFSPVR 175 (278)
Q Consensus 102 ~~~~tIsGrV~~p~~~p~~~~lp~-~~~s~t~V~L~g--~~--~~a~~~~dG~F~f~nVP~GsY~LeVss~-gy~F~p~R 175 (278)
+..+.|.|+|-.. .+..+.-=+. .-++.++|.|.+ |. ..+.+|.+|.|.|.++++|.|.+++..+ ||.+.+..
T Consensus 303 ~G~~~igg~Vw~D-~n~nG~~D~~e~gl~gv~v~L~d~~G~~v~tttTd~~G~Y~F~~L~~G~Y~V~~~~P~Gy~~t~~~ 381 (429)
T 3irp_X 303 AGFGGFGGYVWFD-KNNDGVQNDSNAAAAGITVNLLDPTGIRLATTTTDITGHYNFDNLTNGNYLVEFVMPEGYIPTQAN 381 (429)
T ss_dssp SCEEEEEEEEEEC-TTSSSSSCCSSCBCTTCEEEEECTTSCEEEEEECCTTSEEEEEEEESEEEEEEECCCTTEEECCSS
T ss_pred cceEEEccEEEEe-CCCCCCcCcCCCCcCCeEEEEEcCCCCEEEEEEeCCCCeEEeCCCCCCcEEEEEECCCCCEEcCCC
Confidence 4558999999643 2111110001 126778888863 33 4688999999999999999999999877 77776554
No 9
>1xpn_A Hypothetical protein PA1324; B-barrel, structural genomics, northeast structural genomics consortium, NESG, protein structure initiative; NMR {Pseudomonas aeruginosa} SCOP: b.3.7.1
Probab=94.76 E-value=0.027 Score=48.64 Aligned_cols=26 Identities=23% Similarity=0.406 Sum_probs=23.5
Q ss_pred eEEEecCCccEEEccCCCeeEEEEEE
Q 023727 140 HVTFLRPDGYFSFQNMSAGTHLIEVA 165 (278)
Q Consensus 140 ~~a~~~~dG~F~f~nVP~GsY~LeVs 165 (278)
..+..|.+|.|+|.|||+|.|.|...
T Consensus 109 r~t~~D~~G~F~F~~Lp~G~Yyl~a~ 134 (170)
T 1xpn_A 109 REATTDQNGRFDFDHIPNGTYYISSE 134 (170)
T ss_dssp EEEEECSSCEEEECSCCSEEEEEEEE
T ss_pred eEEEecCCCcEEecCCCCccEEEEEE
Confidence 46889999999999999999999874
No 10
>2xsu_A Catechol 1,2 dioxygenase; oxidoreductase; HET: PIE; 1.60A {Acinetobacter radioresistens} PDB: 2xsr_A* 2xsv_A*
Probab=88.22 E-value=1.7 Score=40.60 Aligned_cols=50 Identities=16% Similarity=0.103 Sum_probs=38.0
Q ss_pred CceEEEEEEECCCCCCCCCCCCCCCceeEEEEEcC----c--------------eeEEEecCCccEEEccCCCeeEE
Q 023727 103 DGFSISGRVKLPGMSLKAFGSPGGKASNVKVVLNG----G--------------EHVTFLRPDGYFSFQNMSAGTHL 161 (278)
Q Consensus 103 ~~~tIsGrV~~p~~~p~~~~lp~~~~s~t~V~L~g----~--------------~~~a~~~~dG~F~f~nVP~GsY~ 161 (278)
....|+|+|...+++| ++++.|-+=. | .-...+|.+|.|.|.-|.||.|-
T Consensus 135 ~~l~v~G~V~D~~G~P---------v~gA~VeiWqada~G~Y~~~~~~~~~~~~rGr~~TD~~G~y~F~TI~Pg~Y~ 202 (312)
T 2xsu_A 135 DTLIIEGTVTDTEGNI---------IEGAKVEVWHANSLGNYSFFDKSQSDFNLRRTILTDVNGKYVALTTMPVGYG 202 (312)
T ss_dssp CEEEEEEEEEETTSCB---------CTTCEEEEECCCTTSCCBTTBTTSCTTTTEEEEECCTTSEEEEEEECCCCEE
T ss_pred eeEEEEEEEECCCCCC---------CCCCEEEEEecCCCCcccCCCCCCCCCCCeeEEEeCCCceEEEEEECcCccc
Confidence 4689999999877765 4556666521 1 12577899999999999999997
No 11
>2boy_A 3-chlorocatechol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: BHO LPP; 1.9A {Rhodococcus opacus}
Probab=88.18 E-value=0.76 Score=41.74 Aligned_cols=54 Identities=20% Similarity=0.217 Sum_probs=40.5
Q ss_pred CCCCceEEEEEEECCCCCCCCCCCCCCCceeEEEEEc----Ccee--------------EEEecCCccEEEccCCCeeEE
Q 023727 100 GSGDGFSISGRVKLPGMSLKAFGSPGGKASNVKVVLN----GGEH--------------VTFLRPDGYFSFQNMSAGTHL 161 (278)
Q Consensus 100 ~~~~~~tIsGrV~~p~~~p~~~~lp~~~~s~t~V~L~----g~~~--------------~a~~~~dG~F~f~nVP~GsY~ 161 (278)
..++...|+|+|...+++| ++++.|-+= .|.| ...+|++|.|.|.-|.||.|-
T Consensus 98 ~~G~~l~l~G~V~D~~G~P---------v~~A~VeiWqada~G~Y~~~~~~~~~~~~rGr~~Td~~G~y~F~TI~Pg~Y~ 168 (254)
T 2boy_A 98 ESGDTLIFRGEVVDQEGAP---------LADVLLDMWQADAAGEYSFINPTLPDYLFRGKIRTDENGRFTLRTIVPAPYE 168 (254)
T ss_dssp CCSCEEEEEEEEECTTSCB---------CCSCEEEEECCCTTSCCBTTBTTSCTTTTEEEEECCTTSEEEEEEECCCCEE
T ss_pred CCCCEEEEEEEEECCCCCC---------CCCCEEEEEcCCCCCccCCcCCCCCCCCCeeEEEeCCCceEEEEEECCcccc
Confidence 3456799999999877665 456666662 1222 577899999999999999996
Q ss_pred E
Q 023727 162 I 162 (278)
Q Consensus 162 L 162 (278)
+
T Consensus 169 ~ 169 (254)
T 2boy_A 169 I 169 (254)
T ss_dssp C
T ss_pred C
Confidence 4
No 12
>2azq_A Catechol 1,2-dioxygenase; CTD, lipid, isozyme, intradiol, oxido; HET: PCF; 2.65A {Pseudomonas putida}
Probab=87.02 E-value=1.9 Score=40.27 Aligned_cols=52 Identities=13% Similarity=0.070 Sum_probs=38.9
Q ss_pred CCCceEEEEEEECCCCCCCCCCCCCCCceeEEEEEc----Ccee--------------EEEecCCccEEEccCCCeeEE
Q 023727 101 SGDGFSISGRVKLPGMSLKAFGSPGGKASNVKVVLN----GGEH--------------VTFLRPDGYFSFQNMSAGTHL 161 (278)
Q Consensus 101 ~~~~~tIsGrV~~p~~~p~~~~lp~~~~s~t~V~L~----g~~~--------------~a~~~~dG~F~f~nVP~GsY~ 161 (278)
.++...|+|+|...+++| ++++.|-+= +|.| ...+|.+|.|.|.-|.||.|.
T Consensus 129 ~G~~l~v~G~V~D~~G~P---------v~gA~VeiWqada~G~Y~~~~~~~~~f~~rGr~~TD~~G~y~F~TI~Pg~Y~ 198 (311)
T 2azq_A 129 PGVVMFLQGQVFDANGKP---------LAGATVDLWHANTQGTYSYFDSTQSEFNLRRRIITDAEGRYRARSIVPSGYG 198 (311)
T ss_dssp CCCEEEEEEEEECSSSCB---------CTTCEEEEECCCTTSCCBTTBTTSCTTTTEEEEECCTTCEEEEEEECCCCEE
T ss_pred CCcEEEEEEEEEcCCCCC---------CCCceeEEEecCCCCccCCCCCCCCCCCCeeEEEeCCCceEEEEEEcCCCcC
Confidence 356789999999877765 345555551 1222 577899999999999999997
No 13
>2pz4_A Protein GBS052; SPAB, GRAM-positive pilins, adhesions, IGG-like domain, cell adhesion; 1.80A {Streptococcus agalactiae} PDB: 3phs_A
Probab=86.38 E-value=1.5 Score=38.44 Aligned_cols=41 Identities=15% Similarity=0.220 Sum_probs=31.9
Q ss_pred EEEecCCccEEEccCCCeeEE-EEEEec-Cccee--eEEEEEEcC
Q 023727 141 VTFLRPDGYFSFQNMSAGTHL-IEVAAI-GYFFS--PVRVDVSAR 181 (278)
Q Consensus 141 ~a~~~~dG~F~f~nVP~GsY~-LeVss~-gy~F~--p~RVdV~~~ 181 (278)
...+|.+|.|.|.++++|+|. .|+..+ ||... ++.+.|...
T Consensus 175 ~~~Td~~G~~~~~~L~~G~Y~l~EtkAP~GY~l~~~~~~f~i~~~ 219 (239)
T 2pz4_A 175 HLETDSSGHIRISGLIHGDYVLKEIETQSGYQIGQAETAVTIEKS 219 (239)
T ss_dssp CEECCTTSEEEEEEEESEEEEEEEEECCTTBCCCCSEEEEEECTT
T ss_pred EEEECCCCeEEECCCCCceEEEEEEECCCCcCcCCccEEEEEeCC
Confidence 356889999999999999997 577654 88876 467777643
No 14
>2x5p_A FBA2, fibronectin binding protein; protein binding; 1.60A {Streptococcus pyogenes}
Probab=85.59 E-value=1.9 Score=34.69 Aligned_cols=57 Identities=25% Similarity=0.357 Sum_probs=38.1
Q ss_pred ceeEEEEEcC--c-eeEEEecCCccEEEccCCCeeEEE-EEEec-Cccee-eEEEEEEcCCCCceE
Q 023727 128 ASNVKVVLNG--G-EHVTFLRPDGYFSFQNMSAGTHLI-EVAAI-GYFFS-PVRVDVSARHPGKVQ 187 (278)
Q Consensus 128 ~s~t~V~L~g--~-~~~a~~~~dG~F~f~nVP~GsY~L-eVss~-gy~F~-p~RVdV~~~~~G~Vr 187 (278)
++.+.+.|.. + ....++ .||.|.|.++++|+|.| |+..+ ||... ++.+.|.. +|+|.
T Consensus 42 L~GA~F~l~~~~g~~v~~~~-sdG~~~~~~L~~G~Y~l~EtkAP~GY~l~~~i~ftV~~--~g~v~ 104 (121)
T 2x5p_A 42 LAGATMELRDSSGKTISTWI-SDGQVKDFYLMPGKYTFVETAAPDGYEVATAITFTVNE--QGQVT 104 (121)
T ss_dssp CCCCEEEEECTTSCEEEEEE-CCSSCEEEEECSEEEEEEEEECCTTCCCCCCEEEEECT--TCCEE
T ss_pred cCCCEEEEEECCCCEEEEEE-eCCEEEEcccCCcEEEEEEEeCCCCcccCCCEEEEEcC--CceEE
Confidence 5677777753 3 333444 58999999999998887 55555 56553 46677764 36664
No 15
>1ti6_B Pyrogallol hydroxytransferase small subunit; molybdenum binding enzyme, MGD-cofactors, DMSO-reductase family, 4Fe-4S-cluster; HET: MGD BTT; 2.00A {Pelobacter acidigallici} SCOP: b.3.5.1 d.58.1.5 PDB: 1ti2_B* 1ti4_B* 1vld_N* 1vle_N* 1vlf_N*
Probab=84.75 E-value=2.3 Score=38.43 Aligned_cols=37 Identities=22% Similarity=0.180 Sum_probs=32.3
Q ss_pred EEEecCCccEEEccCCCeeEEEEEEecCcceeeEEEEE
Q 023727 141 VTFLRPDGYFSFQNMSAGTHLIEVAAIGYFFSPVRVDV 178 (278)
Q Consensus 141 ~a~~~~dG~F~f~nVP~GsY~LeVss~gy~F~p~RVdV 178 (278)
.+.+|..|.|.|..|++|.|.|.|...|| -..-++.|
T Consensus 226 ~~~~d~~G~f~~~~l~~G~y~v~v~a~g~-p~~~~~~~ 262 (274)
T 1ti6_B 226 SAETNFFGEFKFDALDNGEYTVEIDADGK-SYSDTVVI 262 (274)
T ss_dssp EEECCTTSEEEEEEECSEEEEEEEEETTE-EEEEEEEE
T ss_pred EEeecCcCcEEEeccCCcceEEEEecCCC-CccceeEE
Confidence 47789999999999999999999999999 55566666
No 16
>2d7n_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=84.59 E-value=1.1 Score=34.29 Aligned_cols=45 Identities=20% Similarity=0.262 Sum_probs=35.9
Q ss_pred ecCCccEEEccCC--CeeEEEEEEecCcce--eeEEEEEEcCCCCceEE
Q 023727 144 LRPDGYFSFQNMS--AGTHLIEVAAIGYFF--SPVRVDVSARHPGKVQA 188 (278)
Q Consensus 144 ~~~dG~F~f~nVP--~GsY~LeVss~gy~F--~p~RVdV~~~~~G~VrA 188 (278)
-+.||+|.+.=+| +|.|.|.|...|..- .|+++.|....+++|+|
T Consensus 42 d~~dGtY~v~ytP~e~G~h~v~V~~~g~~I~GSPF~v~V~~~~~~~v~~ 90 (93)
T 2d7n_A 42 DNKDGTITVRYAPTEKGLHQMGIKYDGNHIPGSPLQFYVDAINSRHSGP 90 (93)
T ss_dssp ECSSSCEEEEECCSSCEEEEEEEEESSSCCTTCSEEEEECBCCSCCCCC
T ss_pred ECCCCEEEEEEEccCCEEEEEEEEECCEeCCCCCeEEEEecCCCceEEe
Confidence 3578999998887 499999999998654 47889998766677765
No 17
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=83.12 E-value=5.1 Score=31.00 Aligned_cols=56 Identities=16% Similarity=0.148 Sum_probs=42.2
Q ss_pred CceEEEEEEECCCCCCCCCCCCCCCceeEEEEEcCceeEEEecCCccEEEccCCCeeEEEEEEecCc
Q 023727 103 DGFSISGRVKLPGMSLKAFGSPGGKASNVKVVLNGGEHVTFLRPDGYFSFQNMSAGTHLIEVAAIGY 169 (278)
Q Consensus 103 ~~~tIsGrV~~p~~~p~~~~lp~~~~s~t~V~L~g~~~~a~~~~dG~F~f~nVP~GsY~LeVss~gy 169 (278)
+..+|.|.....++. ...+.+.++|+....-+..--+|.+... +|+|+|.+...|-
T Consensus 17 ~~v~i~a~A~D~dg~----------V~kVef~vdg~~vg~dt~apy~~~w~~~-~G~htl~a~AtD~ 72 (98)
T 3pe9_A 17 EFLKITATASDSDGK----------ISRVDFLVDGEVIGSDREAPYEYEWKAV-EGNHEISVIAYDD 72 (98)
T ss_dssp SEEEEEEEECCSSSC----------EEEEEEEETTEEEEEECSSSEEEEEECC-SEEEEEEEEEEET
T ss_pred CEEEEEEEEEeCCCC----------EEEEEEEECCEEecccccCCEEEEEEcC-CccEEEEEEEEEC
Confidence 457788887544331 5788999999887776666668888877 8999999987764
No 18
>2bum_B Protocatechuate 3,4-dioxygenase beta chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_B 1eoa_B 1eob_B* 1eoc_B* 1eo9_B 2buq_B 2bur_B* 2bux_B 2buy_B 2buz_B* 2bv0_B* 2buu_B* 2but_B* 2buv_B* 2buw_B*
Probab=81.51 E-value=2.2 Score=38.44 Aligned_cols=53 Identities=19% Similarity=0.238 Sum_probs=38.8
Q ss_pred CCCceEEEEEEECCCCCCCCCCCCCCCceeEEEEEc----Cc-------------------eeEEEecCCccEEEccCCC
Q 023727 101 SGDGFSISGRVKLPGMSLKAFGSPGGKASNVKVVLN----GG-------------------EHVTFLRPDGYFSFQNMSA 157 (278)
Q Consensus 101 ~~~~~tIsGrV~~p~~~p~~~~lp~~~~s~t~V~L~----g~-------------------~~~a~~~~dG~F~f~nVP~ 157 (278)
.++...|+|+|...+++| ++++.|-+= +| .-...+|++|.|.|.-|.|
T Consensus 75 ~G~~i~v~G~V~D~~G~P---------v~~A~VeiWqada~G~Y~~~~~~~~~~~~~~f~~rGr~~TD~~G~y~F~TI~P 145 (241)
T 2bum_B 75 IGERVIVHGYVRDQFGRP---------VKNALVEVWQANASGRYRHPNDQYIGAMDPNFGGCGRMLTDDNGYYVFRTIKP 145 (241)
T ss_dssp SSCEEEEEEEEEETTSCB---------CCSCEEEEECCCTTSCCSSTTCCCSSCCCTTCCCEEEEECCTTSEEEEEEECC
T ss_pred CCcEEEEEEEEECCCCCC---------CCCcEEEEEecCCCceeCCCCCCcccccCCCccceeEEEeCCCceEEEEEecC
Confidence 356799999999877665 344555541 01 1246789999999999999
Q ss_pred eeEEE
Q 023727 158 GTHLI 162 (278)
Q Consensus 158 GsY~L 162 (278)
|.|-+
T Consensus 146 g~Yp~ 150 (241)
T 2bum_B 146 GPYPW 150 (241)
T ss_dssp CCEEE
T ss_pred Ccccc
Confidence 99975
No 19
>1tmx_A Hydroxyquinol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: HGX; 1.75A {Pimelobacter simplex}
Probab=79.39 E-value=2.5 Score=39.12 Aligned_cols=52 Identities=17% Similarity=0.248 Sum_probs=38.5
Q ss_pred CCceEEEEEEECCCCCCCCCCCCCCCceeEEEEEc----Cce-------------eEEEecCCccEEEccCCCeeEEE
Q 023727 102 GDGFSISGRVKLPGMSLKAFGSPGGKASNVKVVLN----GGE-------------HVTFLRPDGYFSFQNMSAGTHLI 162 (278)
Q Consensus 102 ~~~~tIsGrV~~p~~~p~~~~lp~~~~s~t~V~L~----g~~-------------~~a~~~~dG~F~f~nVP~GsY~L 162 (278)
++...|+|+|...+++| ++++.|-+= .|. -...+|++|.|.|.-|.||.|-+
T Consensus 131 G~~l~v~G~V~D~~G~P---------v~~A~VEiWqada~G~Y~~~~~~~~~~~rGr~~TD~~G~y~F~TI~Pg~Yp~ 199 (293)
T 1tmx_A 131 GEPCWVEGTVTDTDGNP---------VPDARIEVWEADDDGFYDVQYDDDRTAARAHLLSGPDGGYAFWAITPTPYPI 199 (293)
T ss_dssp SCEEEEEEEEEETTSCB---------CTTCEEEEECCCTTSCCGGGSSSCCCCSEEEEECCTTSEEEEEEECCCCEEC
T ss_pred CCEEEEEEEEECCCCCC---------CCCceeEEEecCCCCcccCCccCCCCCceeEEEeCCCceEEEEEECCCcccC
Confidence 56799999999877765 345555551 111 24778999999999999999963
No 20
>2ww8_A RRGA, cell WALL surface anchor family protein; IGG, pilus, CNA_B, adhesin, integrin, cell adhesion; HET: EPE; 1.90A {Streptococcus pneumoniae}
Probab=79.24 E-value=6.2 Score=41.45 Aligned_cols=53 Identities=23% Similarity=0.211 Sum_probs=38.1
Q ss_pred ceeEEEEEcC--c--eeE-EEecCCccEEEccCCCeeEEE-EEEec-Cccee--eEEEEEEc
Q 023727 128 ASNVKVVLNG--G--EHV-TFLRPDGYFSFQNMSAGTHLI-EVAAI-GYFFS--PVRVDVSA 180 (278)
Q Consensus 128 ~s~t~V~L~g--~--~~~-a~~~~dG~F~f~nVP~GsY~L-eVss~-gy~F~--p~RVdV~~ 180 (278)
++.+.+.|.. + ... ..+|.||.++|.++++|+|+| |+..+ ||... ++.|.|..
T Consensus 62 L~GA~F~l~~~~~~~~~~~~tTd~~G~~~~~~L~~G~Y~l~Et~AP~GY~l~~~~~~v~v~~ 123 (893)
T 2ww8_A 62 LGDAVFELKNNTDGTTVSQRTEAQTGEAIFSNIKPGTYTLTEAQPPVGYKPSTKQWTVEVEK 123 (893)
T ss_dssp CCCCEEEEEETTTCCEEEEECCTTTCEEEEEEECSEEEEEEEEECCTTBCCCCCEEEEEECT
T ss_pred cCCCEEEEEECCCCeEEEEEEECCCCeEEECCCCCCcEEEEEccCCCceecCCccEEEEECC
Confidence 6777877752 2 122 457999999999999999965 56655 77665 57777764
No 21
>1dmh_A 1,2-CTD, catechol 1,2-dioxygenase; aromatic hydrocarbon degradation, alpha/beta FO metalloenzyme, substrate, oxidoreductase; HET: LIO; 1.70A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1dlq_A* 1dlm_A* 1dlt_A*
Probab=79.07 E-value=2.8 Score=39.08 Aligned_cols=52 Identities=12% Similarity=0.080 Sum_probs=37.6
Q ss_pred CC-ceEEEEEEECCCCCCCCCCCCCCCceeEEEEEc----Cce----------------eEEEecCCccEEEccCCCeeE
Q 023727 102 GD-GFSISGRVKLPGMSLKAFGSPGGKASNVKVVLN----GGE----------------HVTFLRPDGYFSFQNMSAGTH 160 (278)
Q Consensus 102 ~~-~~tIsGrV~~p~~~p~~~~lp~~~~s~t~V~L~----g~~----------------~~a~~~~dG~F~f~nVP~GsY 160 (278)
+. ...|+|+|...+++| ++++.|-+= .|. -...+|++|.|.|.-|.||.|
T Consensus 130 G~~~l~l~G~V~D~~G~P---------v~~A~VeiWqada~G~Ys~~~~~~~~~~~~~RGr~~TD~~G~y~F~TI~Pg~Y 200 (311)
T 1dmh_A 130 NGHTLILHGTIFDADGKP---------LPNAKVEIWHANTKGFYSHFDPTGEQQAFNMRRSIITDENGQYRVRTILPAGY 200 (311)
T ss_dssp TCCEEEEEEEEECTTSCB---------CTTCEEEEEECCTTSCCTTSCTTSCCSTTTTEEEEECCTTSEEEEEEECCCCE
T ss_pred CceeEEEEEEEEcCCCCC---------CCCcEEEEEccCCCcccCCcCCcccCCCCCCeeEEEeCCCceEEEEEEcCCcc
Confidence 44 689999999877765 344555541 111 147789999999999999999
Q ss_pred EE
Q 023727 161 LI 162 (278)
Q Consensus 161 ~L 162 (278)
-+
T Consensus 201 p~ 202 (311)
T 1dmh_A 201 GC 202 (311)
T ss_dssp EC
T ss_pred cC
Confidence 63
No 22
>3th1_A Chlorocatechol 1,2-dioxygenase; catechol 1,2-dioxygenase family, oxidoreductase, iron bindin; HET: 3PH GOL; 3.40A {Pseudomonas putida}
Probab=78.26 E-value=3.9 Score=37.21 Aligned_cols=52 Identities=12% Similarity=0.068 Sum_probs=38.6
Q ss_pred CCCceEEEEEEECCCCCCCCCCCCCCCceeEEEEEc-----C-------------ceeEEEecCCccEEEccCCCeeEE
Q 023727 101 SGDGFSISGRVKLPGMSLKAFGSPGGKASNVKVVLN-----G-------------GEHVTFLRPDGYFSFQNMSAGTHL 161 (278)
Q Consensus 101 ~~~~~tIsGrV~~p~~~p~~~~lp~~~~s~t~V~L~-----g-------------~~~~a~~~~dG~F~f~nVP~GsY~ 161 (278)
.++...|+|+|...+++| ++++.|-+= | +.-...+|+||.|.|.-|.||.|-
T Consensus 96 ~G~pl~v~G~V~D~~G~P---------v~gA~VeiWqad~~G~Y~~~~~~~~~~~~RG~~~TD~~G~y~F~TI~P~~Yp 165 (260)
T 3th1_A 96 DHKPLIIRGTVRSDTGEL---------LAGAVIDVWHSTPDGLYSGIHDNIPVDYYRGKLVTDSQGNYRVRTTMPVPYQ 165 (260)
T ss_dssp TCCEEEEEEEEEETTSCB---------CSSCEEEEEECCTTSCCTTTSTTCCTTBTEEEEECCTTSEEEEEEECCCCEE
T ss_pred CCCEEEEEEEEECCCCCC---------cCCcEEEEEecCCCCcccCcCCCCCCCCCceEEEeCCCCEEEEEEECCCCCC
Confidence 456789999999877765 455555551 1 122578999999999999999984
No 23
>3t63_A 3,4-PCD, protocatechuate 3,4-dioxygenase alpha chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 1ykl_A* 1ykm_A* 1ykn_A* 1yko_A* 1ykp_A* 2pcd_A 1ykk_A* 3lmx_A* 3lxv_A* 3mfl_A* 3mi1_A* 3mi5_A* 3lkt_A* 3mv6_A* 3pca_A* 3pcb_A* 3pcc_A* 3pcd_A 3pce_A* 3pcf_A* ...
Probab=77.36 E-value=3.6 Score=35.98 Aligned_cols=54 Identities=17% Similarity=0.135 Sum_probs=38.9
Q ss_pred CCCCceEEEEEEECCCCCCCCCCCCCCCceeEEEEEc-----C-------------ceeEEEecCC-ccEEEccCCCeeE
Q 023727 100 GSGDGFSISGRVKLPGMSLKAFGSPGGKASNVKVVLN-----G-------------GEHVTFLRPD-GYFSFQNMSAGTH 160 (278)
Q Consensus 100 ~~~~~~tIsGrV~~p~~~p~~~~lp~~~~s~t~V~L~-----g-------------~~~~a~~~~d-G~F~f~nVP~GsY 160 (278)
..++...|+|+|...+++| ++++.|-+= | +.-...+|.| |.|.|.-|.||.|
T Consensus 44 ~~G~~l~v~G~V~D~~G~P---------v~~A~VeiWqada~G~Y~~~~~~~~~f~~rGr~~TD~~~G~~~F~TI~Pg~Y 114 (200)
T 3t63_A 44 APGEHILLLGQVYDGNGHL---------VRDSFLEVWQADANGEYQDAYNLENAFNSFGRTATTFDAGEWTLHTVKPGVV 114 (200)
T ss_dssp SSSCEEEEEECEECTTSCB---------CSSCEEEEEECCTTSCCCCBCCTTSSBCSEEEEECCSSCCSEEEEEECCCCE
T ss_pred CCCCEEEEEEEEECCCCCC---------CCCCEEEEEccCCCCCcCCCCCCCCCccccceEecCCCCCEEEEEEECCcCc
Confidence 4456799999999877765 344555441 1 1124678998 9999999999999
Q ss_pred EE
Q 023727 161 LI 162 (278)
Q Consensus 161 ~L 162 (278)
-.
T Consensus 115 ~~ 116 (200)
T 3t63_A 115 NN 116 (200)
T ss_dssp EC
T ss_pred CC
Confidence 74
No 24
>3t63_M 3,4-PCD, protocatechuate 3,4-dioxygenase beta chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 3mi1_M* 3mv4_M* 3mi5_M* 3mfl_M* 3mv6_M* 3t67_M 3pca_M* 3pcb_M* 2pcd_M* 3pce_M* 3pcf_M* 3pcc_M* 3pch_M* 3pci_M* 3pcj_M* 3pck_M* 3pcl_M* 3pcm_M* 3pcn_M* 3pcg_M ...
Probab=75.89 E-value=3.7 Score=36.88 Aligned_cols=54 Identities=28% Similarity=0.409 Sum_probs=38.5
Q ss_pred CCCCceEEEEEEECCCCCCCCCCCCCCCceeEEEEE---c--C------------------ceeEEEecCCccEEEccCC
Q 023727 100 GSGDGFSISGRVKLPGMSLKAFGSPGGKASNVKVVL---N--G------------------GEHVTFLRPDGYFSFQNMS 156 (278)
Q Consensus 100 ~~~~~~tIsGrV~~p~~~p~~~~lp~~~~s~t~V~L---~--g------------------~~~~a~~~~dG~F~f~nVP 156 (278)
..++...|+|+|...+++| +.++.|-+ | | +.-...+|.||.|.|.-|.
T Consensus 73 ~~G~~i~l~G~V~D~~G~P---------v~~A~VEiWqada~G~Y~~~~d~~~~~~~~~f~~rGr~~TD~~G~y~F~TI~ 143 (238)
T 3t63_M 73 PIGERIIVAGRVVDQYGKP---------VPNTLVEMWQANAGGRYRHKNDRYLAPLDPNFGGVGRCLTDSDGYYSFRTIK 143 (238)
T ss_dssp CSSCEEEEEEEEEETTSCB---------CTTCEEEEEECCTTSCCSSTTCCCSSCCCTTCCCEEEEECCTTSEEEEEEEC
T ss_pred CCCcEEEEEEEEECCCCCC---------CCCCEEEEEecCCCCCCCCccccccccCCCCcCceeEEEECCCceEEEEEEC
Confidence 3457799999999877765 33444444 0 0 1114688999999999999
Q ss_pred CeeEEE
Q 023727 157 AGTHLI 162 (278)
Q Consensus 157 ~GsY~L 162 (278)
||.|-.
T Consensus 144 Pg~Yp~ 149 (238)
T 3t63_M 144 PGPAPW 149 (238)
T ss_dssp CCCEEE
T ss_pred CcCccC
Confidence 999965
No 25
>4ank_A Transthyretin; hormone binding protein, thyroxine transport protein, hormon amyloidosis inhibition; 1.70A {Homo sapiens}
Probab=74.69 E-value=6.5 Score=32.89 Aligned_cols=57 Identities=19% Similarity=0.147 Sum_probs=36.5
Q ss_pred eEEEEEEECCCCCCCCCCCCCCCceeEEEEEc----Cce----eEEEecCCccEEE----ccCCCeeEEEEEEecCc
Q 023727 105 FSISGRVKLPGMSLKAFGSPGGKASNVKVVLN----GGE----HVTFLRPDGYFSF----QNMSAGTHLIEVAAIGY 169 (278)
Q Consensus 105 ~tIsGrV~~p~~~p~~~~lp~~~~s~t~V~L~----g~~----~~a~~~~dG~F~f----~nVP~GsY~LeVss~gy 169 (278)
.-|+=.|...... .| .+++.|.|. +++ ..+.+|.||...- .+..+|.|.|....-+|
T Consensus 30 ~PLTtHVLDt~~G-----~P---A~gv~V~L~~~~~~~~~~~l~~~~Td~DGR~~~ll~~~~~~~G~Y~L~F~tg~Y 98 (147)
T 4ank_A 30 CPLMVKVLDAVRG-----SP---AINVAVHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEGIYKVEIDTKSY 98 (147)
T ss_dssp CCEEEEEEETTTT-----EE---CCSCEEEEEEECTTSCEEEEEEEECCTTSEECCSCCTTTCCSEEEEEEECHHHH
T ss_pred CCeEEEEEeCCCC-----cC---CCCCEEEEEEECCCCCeEEEEEEEeCCCCCCCCCCCccccCCceEEEEEEHHHH
Confidence 4477677643321 12 577888773 222 2588999999642 23356999999988777
No 26
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=74.50 E-value=4.4 Score=35.54 Aligned_cols=53 Identities=21% Similarity=0.194 Sum_probs=38.2
Q ss_pred CCCCceEEEEEEECCCCCCCCCCCCCCCceeEEEEEc-----C------------------ceeEEEe-cCCccEEEccC
Q 023727 100 GSGDGFSISGRVKLPGMSLKAFGSPGGKASNVKVVLN-----G------------------GEHVTFL-RPDGYFSFQNM 155 (278)
Q Consensus 100 ~~~~~~tIsGrV~~p~~~p~~~~lp~~~~s~t~V~L~-----g------------------~~~~a~~-~~dG~F~f~nV 155 (278)
..+....|+|+|...+.+| ++++.|-+= | +.-...+ |++|.|.|.-|
T Consensus 48 ~~G~~l~v~G~V~D~~G~P---------v~~A~VeiWqada~G~Y~~~~~~~~~~~~~~f~~rGr~~T~d~~G~y~F~TI 118 (209)
T 2bum_A 48 TQGQRIRLEGQVFDGLGLP---------LRDVLIEIWQADTNGVYPSQADTQGKQVDPNFLGWGRTGADFGTGFWSFNTI 118 (209)
T ss_dssp CCSCEEEEEECEECTTSCB---------CSSCEEEEECCCTTSCCSSTTCCSCSCCCTTCCCEEEEECCTTTCCEEEEEE
T ss_pred CCCCEEEEEEEEECCCCCC---------CCCCEEEEEecCCCCcccCccCCcccccCCCccceeEEeeeCCCcEEEEEEE
Confidence 3456799999999877665 455566551 1 0114666 89999999999
Q ss_pred CCeeEE
Q 023727 156 SAGTHL 161 (278)
Q Consensus 156 P~GsY~ 161 (278)
.||.|-
T Consensus 119 ~Pg~yp 124 (209)
T 2bum_A 119 KPGAVP 124 (209)
T ss_dssp CCCCCB
T ss_pred ccCccc
Confidence 999986
No 27
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=73.41 E-value=13 Score=31.45 Aligned_cols=66 Identities=15% Similarity=-0.013 Sum_probs=46.9
Q ss_pred CceEEEEEEECCCCCCCCCCCCCCCceeEEEEEcCceeEEEecCCccEEEccCCCeeEEEEEEecCcce-----eeEEEE
Q 023727 103 DGFSISGRVKLPGMSLKAFGSPGGKASNVKVVLNGGEHVTFLRPDGYFSFQNMSAGTHLIEVAAIGYFF-----SPVRVD 177 (278)
Q Consensus 103 ~~~tIsGrV~~p~~~p~~~~lp~~~~s~t~V~L~g~~~~a~~~~dG~F~f~nVP~GsY~LeVss~gy~F-----~p~RVd 177 (278)
+..+|.+... ++.. ...+.+.++|.....-....-+|.+...+.|.|.|.+...|..= .++.|.
T Consensus 17 ~~vtv~~~As-~d~~----------V~~Ve~~~dg~~v~~~t~~~ys~~~~~~~~G~htlta~A~D~aGn~s~s~~v~vt 85 (190)
T 3pdd_A 17 KDINISATVK-SKTP----------VSKVEFYNGDTLISSDTTAPYTAKITGAAVGAYNLKAVAVLSDGRRIESPVTPVL 85 (190)
T ss_dssp SCEEEEEEEC-CSSC----------EEEEEEEETTEEEEEECSSSEEEEECSCCSEEEEEEEEEEETTSCEEECCCEEEE
T ss_pred CeEEEEEEEe-CCCC----------EEEEEEEECCEEEccccCCceEEEeccCCCccEEEEEEEEECCCCEeeecceeEE
Confidence 4689999887 4432 57788888887766544444577777888999999998877531 235666
Q ss_pred EE
Q 023727 178 VS 179 (278)
Q Consensus 178 V~ 179 (278)
|.
T Consensus 86 V~ 87 (190)
T 3pdd_A 86 VK 87 (190)
T ss_dssp EE
T ss_pred ec
Confidence 65
No 28
>2pz4_A Protein GBS052; SPAB, GRAM-positive pilins, adhesions, IGG-like domain, cell adhesion; 1.80A {Streptococcus agalactiae} PDB: 3phs_A
Probab=72.95 E-value=1.8 Score=37.99 Aligned_cols=39 Identities=23% Similarity=0.156 Sum_probs=27.8
Q ss_pred EEEecCCccEEEccCCCeeEEE-EEEecCc--ceeeEEEEEE
Q 023727 141 VTFLRPDGYFSFQNMSAGTHLI-EVAAIGY--FFSPVRVDVS 179 (278)
Q Consensus 141 ~a~~~~dG~F~f~nVP~GsY~L-eVss~gy--~F~p~RVdV~ 179 (278)
...+|.+|.+.|.++|+|.|.| |+..+.- ...++.|+|.
T Consensus 71 ~~tTd~~G~~~~~~L~~G~Y~v~Et~aP~G~l~~~~~~v~i~ 112 (239)
T 2pz4_A 71 EATTNQQGKATFNQLPDGIYYGLAVKAGEKNRNVSAFLVDLS 112 (239)
T ss_dssp EEECCTTSEEEEEEEESEEEEEEEEETTEECTTBCCEEEEES
T ss_pred EEEECCCCeEEECCCCCeeEEEEEEECCCCcccCceEEEEeC
Confidence 3568999999999999999988 5554432 2345566664
No 29
>3o5u_A Chlorocatechol 1,2-dioxygenase; beta barrel,oxidoreductase, oxidoreductase; HET: MYY DHB; 2.35A {Rhodococcus opacus} PDB: 3o32_A* 1s9a_A* 3o6j_A* 3o6r_A*
Probab=72.86 E-value=5.7 Score=36.06 Aligned_cols=52 Identities=15% Similarity=0.176 Sum_probs=37.3
Q ss_pred CCCceEEEEEEECCCCCCCCCCCCCCCceeEEEEEc-----C--------------ceeEEEecCCccEEEccCCCeeEE
Q 023727 101 SGDGFSISGRVKLPGMSLKAFGSPGGKASNVKVVLN-----G--------------GEHVTFLRPDGYFSFQNMSAGTHL 161 (278)
Q Consensus 101 ~~~~~tIsGrV~~p~~~p~~~~lp~~~~s~t~V~L~-----g--------------~~~~a~~~~dG~F~f~nVP~GsY~ 161 (278)
.++...|+|+|...+++| ++++.|-+= | +.-...+|.||.|.|.-|.||.|-
T Consensus 100 ~G~~l~l~G~V~D~~G~P---------v~~A~VeiWqada~G~Ys~~~~~~~~~~~~RGr~~TD~~G~y~F~TI~Pg~Yp 170 (257)
T 3o5u_A 100 PGDRMRFTGSVRDTSGTP---------ITGAVIDVWHSTNDGNYSFFSPALPDQYLLRGRVVPAEDGSIEFHSIRPVPYE 170 (257)
T ss_dssp CSCEEEEEEEEECTTCCB---------CTTCEEEEECCCTTSCCTTSCTTSCSSCTTEEEECCCTTSEEEEEEECCCCEE
T ss_pred CCCEEEEEEEEECCCCCC---------CCCcEEEEEecCCCCCCCCcCCCCCcccCceeEEEeCCCceEEEEEECCCCcC
Confidence 346789999999877765 334444441 0 122568899999999999999994
No 30
>2k7p_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=72.40 E-value=13 Score=31.32 Aligned_cols=45 Identities=22% Similarity=0.309 Sum_probs=34.3
Q ss_pred cCCccEEEccCC--CeeEEEEEEecCccee--eEEEEEEcCCCCceEEE
Q 023727 145 RPDGYFSFQNMS--AGTHLIEVAAIGYFFS--PVRVDVSARHPGKVQAA 189 (278)
Q Consensus 145 ~~dG~F~f~nVP--~GsY~LeVss~gy~F~--p~RVdV~~~~~G~VrA~ 189 (278)
+.||+|.+.=.| +|.|.|+|..-+.... |+++.|..-.+++++|+
T Consensus 55 ~~dgty~v~y~P~~~G~h~i~V~~~g~~i~gSPf~~~V~~~d~~~~~~~ 103 (188)
T 2k7p_A 55 NKDGTVTVRYAPSEAGLHEMDIRYDNMHIPGSPLQFYVDYVNCGHVTAY 103 (188)
T ss_dssp CSSSEEEEEECCCCCEEEEEEEEETTEECTTCSEEEEECCTTSSSCEEE
T ss_pred CCCCEEEEEEEccccEeEEEEEEECCEecCCCCEEEEecccCCcceEEe
Confidence 678888887776 5999999999986654 78888865444566665
No 31
>3kpt_A Collagen adhesion protein; intramolecular amide bond, pilin subunit, beta sheet; 2.10A {Bacillus cereus atcc 14579} PDB: 3rkp_A
Probab=71.79 E-value=4.6 Score=37.57 Aligned_cols=54 Identities=24% Similarity=0.403 Sum_probs=37.7
Q ss_pred ceeEEEEEc--Cce-e-------EEEecCCccEEEccCCCeeEEE-EEEecC----------cce--eeEEEEEEcC
Q 023727 128 ASNVKVVLN--GGE-H-------VTFLRPDGYFSFQNMSAGTHLI-EVAAIG----------YFF--SPVRVDVSAR 181 (278)
Q Consensus 128 ~s~t~V~L~--g~~-~-------~a~~~~dG~F~f~nVP~GsY~L-eVss~g----------y~F--~p~RVdV~~~ 181 (278)
++.+.+.|. +|. . ...+|.+|.|.|.+++.|.|.| |+..+. |.. .++.|.|...
T Consensus 266 L~GA~F~l~~~~g~~~~~~~~~~~~~td~~G~~~~~~L~~G~Y~l~E~~aP~~~~~~~~~~GY~~~~~~~~~~i~~~ 342 (355)
T 3kpt_A 266 MKGAEFVLKDNNGKIVVVAGKEVTGVSDENGVIKWSNIPYGDYQIFETKAPTYTKEDGTKTSYQLLKDPIDVKISEN 342 (355)
T ss_dssp CSCCEEEEEETTSCBCBSSSSBCEEECCTTSEEEEEEEESSEEEEEEEECCEEECTTCCEEECCCCCSCEEEECBTT
T ss_pred cCCCEEEEEeCCCCEEEeccceEEEEECCCCeEEECcCCCceEEEEEEECCCCcccccccCCcccCCCcEEEEEccC
Confidence 566777764 222 2 3468899999999999998886 566664 654 5677777653
No 32
>3n9t_A PNPC; phospholipid binds, N-terminal helix tunnel, oxidoreductase; HET: HGX FLC; 2.00A {Pseudomonas putida}
Probab=69.53 E-value=8.1 Score=35.66 Aligned_cols=53 Identities=19% Similarity=0.018 Sum_probs=38.8
Q ss_pred CCCceEEEEEEECCCCCCCCCCCCCCCceeEEEEEc-----C-------------ceeEEEecCCccEEEccCCCeeEEE
Q 023727 101 SGDGFSISGRVKLPGMSLKAFGSPGGKASNVKVVLN-----G-------------GEHVTFLRPDGYFSFQNMSAGTHLI 162 (278)
Q Consensus 101 ~~~~~tIsGrV~~p~~~p~~~~lp~~~~s~t~V~L~-----g-------------~~~~a~~~~dG~F~f~nVP~GsY~L 162 (278)
.+....|+|+|...+++| ++++.|-+= | +.-...+|.||.|.|.-|.||.|-+
T Consensus 126 ~G~~l~l~G~V~D~~G~P---------v~~A~VeiWqada~G~Y~~~~~~~~~~~lRGr~~TD~~G~y~F~TI~Pg~Yp~ 196 (290)
T 3n9t_A 126 DGVPALVYGRVLDVQGRP---------VVGAVLDVWQTADNGMYSGQDPDQPFGNLRGRYRSDNDGCFAIQTTVPVCYPI 196 (290)
T ss_dssp CSCEEEEEEEEEETTSCB---------CSSCEEEEECCCTTSCCTTTSTTSCTTTTEEEEECCTTSEEEEEEECCCCEEC
T ss_pred CCCeEEEEEEEECCCCCC---------CCCCEEEEEccCCCCCcCCCCCCCCCCCceeEEEeCCCceEEEEEeCCCCcCC
Confidence 456799999999877765 344555441 0 1225689999999999999999964
No 33
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=68.61 E-value=19 Score=30.30 Aligned_cols=57 Identities=16% Similarity=0.133 Sum_probs=39.6
Q ss_pred CCceEEEEEEECCCCCCCCCCCCCCCceeEEEEEcCceeEEEecCCccEEEccCCCeeEEEEEEecCc
Q 023727 102 GDGFSISGRVKLPGMSLKAFGSPGGKASNVKVVLNGGEHVTFLRPDGYFSFQNMSAGTHLIEVAAIGY 169 (278)
Q Consensus 102 ~~~~tIsGrV~~p~~~p~~~~lp~~~~s~t~V~L~g~~~~a~~~~dG~F~f~nVP~GsY~LeVss~gy 169 (278)
....+|++....+++. +..+.+.++|....+-.....+|.+.. +.|+|.|.+...|-
T Consensus 108 ~~~vtl~~~AsD~~g~----------V~~Ve~~~dg~~v~t~t~~~y~~~~~~-~~G~~tl~a~A~D~ 164 (190)
T 3pdd_A 108 NEFLKITATASDSDGK----------ISRVDFLVDGEVIGSDREAPYEYEWKA-VEGNHEISVIAYDD 164 (190)
T ss_dssp TSEEEEEEEEECSSSC----------EEEEEEEETTEEEEEECSSSEEEEEEC-CSEEEEEEEEEEET
T ss_pred CCeEEEEEEEECCCCc----------EEEEEEEECCEEEecccCCCEEEEEec-CCeeEEEEEEEEEC
Confidence 3456777777644332 577888888877666555555667766 88999999987664
No 34
>4fxt_A Uncharacterized protein; PF12866 family, DUF3823, structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.77A {Bacteroides ovatus}
Probab=68.30 E-value=15 Score=32.15 Aligned_cols=71 Identities=11% Similarity=0.122 Sum_probs=49.3
Q ss_pred CceEEEEEEECCCCCCCCCCCCCCCceeEEEEEcC------ceeEEEecCCccEEEccCCCeeEEEEEEecC--c--cee
Q 023727 103 DGFSISGRVKLPGMSLKAFGSPGGKASNVKVVLNG------GEHVTFLRPDGYFSFQNMSAGTHLIEVAAIG--Y--FFS 172 (278)
Q Consensus 103 ~~~tIsGrV~~p~~~p~~~~lp~~~~s~t~V~L~g------~~~~a~~~~dG~F~f~nVP~GsY~LeVss~g--y--~F~ 172 (278)
...+++|+|. -.+++.+ +. ...+++.|-. +.....+..||+|+ .-+=.|.|.|.+.-.| + ...
T Consensus 6 P~a~l~G~iv-~tgE~i~--~~---~~gv~i~l~e~g~~~~~~~~~~v~qDGtf~-~~lF~G~Yki~~~~nGpf~~~~~d 78 (202)
T 4fxt_A 6 PKATLTGKAI-YDGEAVG--VR---SGSSEFALFQDGYALKGSIPVYIAQDGSYS-VSLFNGDYKLVRMGNAPWERPSND 78 (202)
T ss_dssp CEEEEEEEEE-ETTEECB--CC---TTTEEEEEECCC----CCEEEEBCTTSEEE-EEEESEEEEEEEEETCSBCCCSSC
T ss_pred CCceEEEEEE-ECCCEee--ec---CCceEEEEEEcccCCCCCeeEEEcCCCcEE-EEEEcceeEEEECCCCCcccCCCc
Confidence 4578999998 3344422 21 3457777753 34567899999999 8888999999976333 2 455
Q ss_pred eEEEEEEc
Q 023727 173 PVRVDVSA 180 (278)
Q Consensus 173 p~RVdV~~ 180 (278)
+.+|+|..
T Consensus 79 ti~v~i~G 86 (202)
T 4fxt_A 79 TIYITVRG 86 (202)
T ss_dssp EEEEEESS
T ss_pred eEEEEECC
Confidence 67888864
No 35
>3hhy_A 1,2-CTD, catechol 1,2-dioxygenase; beta-sandwich, aromatic hydrocarbons catabolism, dioxygenase metal-binding, oxidoreductase; HET: 6PL; 1.55A {Rhodococcus opacus} PDB: 3hhx_A* 3hgi_A* 3hj8_A* 3hjq_A* 3hjs_A* 3i4v_A* 3hkp_A* 3i51_A* 3i4y_A*
Probab=67.87 E-value=9.3 Score=35.11 Aligned_cols=50 Identities=16% Similarity=0.137 Sum_probs=36.7
Q ss_pred CceEEEEEEECCCCCCCCCCCCCCCceeEEEEEc-----C-------------ceeEEEecCCccEEEccCCCeeEE
Q 023727 103 DGFSISGRVKLPGMSLKAFGSPGGKASNVKVVLN-----G-------------GEHVTFLRPDGYFSFQNMSAGTHL 161 (278)
Q Consensus 103 ~~~tIsGrV~~p~~~p~~~~lp~~~~s~t~V~L~-----g-------------~~~~a~~~~dG~F~f~nVP~GsY~ 161 (278)
....|+|+|...+++| ++++.|-+= | +.-...+|.||.|.|.-|.||.|-
T Consensus 130 ~pl~l~G~V~D~~G~P---------v~~A~VeiWqada~G~Ys~~~~~~~~~~lRGr~~TD~dG~y~F~TI~Pg~Yp 197 (280)
T 3hhy_A 130 TPLVFSGQVTDLDGNG---------LAGAKVELWHADNDGYYSQFAPHLPEWNLRGTIIADEEGRYEITTIQPAPYQ 197 (280)
T ss_dssp CEEEEEEEEECTTSCB---------CSSCEEEEECCCTTSCCTTSSTTSCTTTTEEEEECCTTSEEEEEEECCCCEE
T ss_pred eEEEEEEEEECCCCCC---------CCCcEEEEEecCCCCCCCCCCCCCCCCcceEEEEeCCCceEEEEEECCcCcC
Confidence 4689999999877765 344555541 1 122578999999999999999995
No 36
>3kpt_A Collagen adhesion protein; intramolecular amide bond, pilin subunit, beta sheet; 2.10A {Bacillus cereus atcc 14579} PDB: 3rkp_A
Probab=67.51 E-value=3 Score=38.84 Aligned_cols=69 Identities=20% Similarity=0.198 Sum_probs=43.8
Q ss_pred EEEEEECCCCCCCCCCCCCCCceeEEEEEc---Ccee--EEEecCCccEEEccCCCeeEEE-EEEec-Cccee--eEEEE
Q 023727 107 ISGRVKLPGMSLKAFGSPGGKASNVKVVLN---GGEH--VTFLRPDGYFSFQNMSAGTHLI-EVAAI-GYFFS--PVRVD 177 (278)
Q Consensus 107 IsGrV~~p~~~p~~~~lp~~~~s~t~V~L~---g~~~--~a~~~~dG~F~f~nVP~GsY~L-eVss~-gy~F~--p~RVd 177 (278)
+.|.|.+......+ ..++.+.+.|. |... ...+|.+|.+.|.++++|.|.| |...+ ||... ++.+.
T Consensus 6 ~~g~~~i~K~d~~~-----~~L~GA~F~l~~~~g~~~~~~~tTd~~G~~~~~~L~~G~Y~~~Et~aP~GY~~~~~~~~f~ 80 (355)
T 3kpt_A 6 KRGAVDLIKTGVNE-----KAMAGAVFSLFKKDGTEVKKELATDANGHIRVQGLEYGEYYFQETKAPKGYVIDPTKREFF 80 (355)
T ss_dssp CEEEEEEEEECGGG-----CBCCSCEEEEEETTSCEEEEEEECCTTSEEEEEEEESEEEEEEEEECCTTBCCCCCCEEEE
T ss_pred EEEEEEEEEECCCC-----CCcCCcEEEEEECCCCEEEEEEEECCCCeEEECCcCCceEEEEEEeCCCCeEcCCceEEEE
Confidence 45666654332211 12567777774 3333 3467999999999999998876 45544 67764 46677
Q ss_pred EEc
Q 023727 178 VSA 180 (278)
Q Consensus 178 V~~ 180 (278)
|..
T Consensus 81 v~~ 83 (355)
T 3kpt_A 81 VKN 83 (355)
T ss_dssp ECS
T ss_pred Eec
Confidence 665
No 37
>2ds4_A Tripartite motif protein 45; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=63.92 E-value=10 Score=28.61 Aligned_cols=36 Identities=22% Similarity=0.264 Sum_probs=26.7
Q ss_pred cCCccEEEccCC--CeeEEEEEEecCcce--eeEEEEEEc
Q 023727 145 RPDGYFSFQNMS--AGTHLIEVAAIGYFF--SPVRVDVSA 180 (278)
Q Consensus 145 ~~dG~F~f~nVP--~GsY~LeVss~gy~F--~p~RVdV~~ 180 (278)
+.||+|.+.=.| +|.|.|.|...+-.- .|++|.|..
T Consensus 72 ~~dGty~v~y~p~~~G~y~i~V~~~g~~i~gSPF~v~v~~ 111 (113)
T 2ds4_A 72 NKDGTYYISYTPKEPGVYTVWVCIKEQHVQGSPFTVTVRR 111 (113)
T ss_dssp CSSSEEEEEEECSSSEEEEEEEEESSCBCTTCSEEEEEEC
T ss_pred CCCCEEEEEEEeCCCeEEEEEEEECCEECCCCCEEEEEEc
Confidence 458999887776 499999999877554 467777753
No 38
>3hn5_A Putative exported protein BF0290; YP_210027.1, structural genomics, joint center for S genomics, JCSG; HET: MSE; 1.70A {Bacteroides fragilis nctc 9343}
Probab=63.86 E-value=22 Score=31.54 Aligned_cols=72 Identities=17% Similarity=0.146 Sum_probs=48.6
Q ss_pred CceEEEEEEECCCCCCCCCCCCCCCceeEEEEEcC------ceeEEEecCCccEEEccCCCeeEEEEEEecCc-----ce
Q 023727 103 DGFSISGRVKLPGMSLKAFGSPGGKASNVKVVLNG------GEHVTFLRPDGYFSFQNMSAGTHLIEVAAIGY-----FF 171 (278)
Q Consensus 103 ~~~tIsGrV~~p~~~p~~~~lp~~~~s~t~V~L~g------~~~~a~~~~dG~F~f~nVP~GsY~LeVss~gy-----~F 171 (278)
...+++|+|. -.+++ +.+. --..+++.|-. +.....+..||+|+ .-+=.|.|.|.+..-.. ..
T Consensus 9 P~a~l~G~iv-~tGE~--i~~~--~~~gv~i~l~E~gy~~~~~~~~~v~qDGtf~-~~lF~G~Yki~~~~gnGPf~~~~~ 82 (215)
T 3hn5_A 9 PESMLTGRVM-YNGEA--LQLR--GNEAVQLQLYQHGYAKHDPINVYVNQDGMYS-ANLFDGEYQMITKSGNGPWTSEGR 82 (215)
T ss_dssp -CEEEEEEEE-ETTEE--CCCC--CTTSCEEEEESSCGGGCCCEEEEBCTTSEEE-EEECSEEEEEEECTTCSSBCSTTC
T ss_pred CCceEEEEEE-ECCCE--eeec--CCCceEEEEEEcccCCCCCeeEEEcCCCcEE-EEEECceeEEEEecCCCCcccCCC
Confidence 4578999998 33443 2222 12337777753 34568899999999 78889999999974333 33
Q ss_pred eeEEEEEEc
Q 023727 172 SPVRVDVSA 180 (278)
Q Consensus 172 ~p~RVdV~~ 180 (278)
.+.+|+|..
T Consensus 83 dti~v~i~G 91 (215)
T 3hn5_A 83 DTINVTVAG 91 (215)
T ss_dssp CCEEEEESS
T ss_pred CeEEEEECC
Confidence 457888864
No 39
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=62.83 E-value=8.1 Score=38.18 Aligned_cols=34 Identities=21% Similarity=0.219 Sum_probs=26.1
Q ss_pred EcC-ceeEEEecCCccEEEccCCCeeEEEEEEecC
Q 023727 135 LNG-GEHVTFLRPDGYFSFQNMSAGTHLIEVAAIG 168 (278)
Q Consensus 135 L~g-~~~~a~~~~dG~F~f~nVP~GsY~LeVss~g 168 (278)
|+| ...|..+..+..-+|.|+|||+|+++|.+.+
T Consensus 724 L~G~d~~W~~~~~~~~~~ytnL~pG~Y~f~V~a~~ 758 (781)
T 3v9f_A 724 LKGLENSWYTINEQNSVTFRNIPPGKYEFLVKARL 758 (781)
T ss_dssp EETTEEEEEEESSCSEEEECSCCSEEEEEEEEEEE
T ss_pred ecCCCCCccCcCCcceEEEcCCCCceEEEEEEEEC
Confidence 444 2446666677889999999999999997654
No 40
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=61.16 E-value=7.3 Score=38.56 Aligned_cols=29 Identities=24% Similarity=0.284 Sum_probs=23.5
Q ss_pred eEEEecCCccEEEccCCCeeEEEEEEecC
Q 023727 140 HVTFLRPDGYFSFQNMSAGTHLIEVAAIG 168 (278)
Q Consensus 140 ~~a~~~~dG~F~f~nVP~GsY~LeVss~g 168 (278)
.|..+.....-+|.|+|||+|+++|.+.+
T Consensus 736 ~W~~~~~~~~~~ytnL~pG~Y~f~V~a~n 764 (795)
T 4a2l_A 736 EWYYLTDSRTVSYSNLPQGTYQFLVKAAN 764 (795)
T ss_dssp SCEEESSCCEEEEECCCSEEEEEEEEEEC
T ss_pred CccCCCCcCeEEecccCCCeEEEEEEEEC
Confidence 35555667788999999999999998765
No 41
>2dj4_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=60.91 E-value=12 Score=28.51 Aligned_cols=37 Identities=22% Similarity=0.247 Sum_probs=28.1
Q ss_pred ecCCccEEEccCC--CeeEEEEEEecCcce--eeEEEEEEc
Q 023727 144 LRPDGYFSFQNMS--AGTHLIEVAAIGYFF--SPVRVDVSA 180 (278)
Q Consensus 144 ~~~dG~F~f~nVP--~GsY~LeVss~gy~F--~p~RVdV~~ 180 (278)
-+.||+|.+.=.| +|.|.|+|..-|-.- .|++|.|..
T Consensus 63 d~~dGty~v~Y~p~~~G~y~i~V~~~g~~V~gSPF~v~V~~ 103 (108)
T 2dj4_A 63 DNGDGTHTVTYTPSQEGPYMVSVKYADEEIPRSPFKVKVLP 103 (108)
T ss_dssp ECSSSEEEEEECCSSCEEEEEEEEESSSBCTTCSEEEEEBC
T ss_pred ECCCCEEEEEEEeCCCeeEEEEEEECCEECCCCCEEEEEec
Confidence 3568999987776 499999999888655 467777764
No 42
>2ee9_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=58.92 E-value=17 Score=27.91 Aligned_cols=38 Identities=18% Similarity=0.322 Sum_probs=29.9
Q ss_pred ecCCccEEEccCC--CeeEEEEEEecCccee--eEEEEEEcC
Q 023727 144 LRPDGYFSFQNMS--AGTHLIEVAAIGYFFS--PVRVDVSAR 181 (278)
Q Consensus 144 ~~~dG~F~f~nVP--~GsY~LeVss~gy~F~--p~RVdV~~~ 181 (278)
-+.||+|.+.=+| +|.|+|.|...|..-+ |+++.|..-
T Consensus 50 d~~dGtY~v~ytP~e~G~h~v~V~~~G~~I~GSPF~v~V~~~ 91 (95)
T 2ee9_A 50 DNKDGTVTVRYAPTEVGLHEMHIKYMGSHIPESPLQFYVNYP 91 (95)
T ss_dssp ECSSSCEEEECCCCSSEEEEEEEEESSCBCTTCSEEEEECCT
T ss_pred eCCCCeEEEEEEecCCEeEEEEEEECCEECCCCCeEEEEecc
Confidence 4578999998887 4999999999886553 677777654
No 43
>2dib_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=57.53 E-value=7.4 Score=30.54 Aligned_cols=37 Identities=27% Similarity=0.413 Sum_probs=29.0
Q ss_pred ecCCccEEEccCC--CeeEEEEEEecCcce--eeEEEEEEc
Q 023727 144 LRPDGYFSFQNMS--AGTHLIEVAAIGYFF--SPVRVDVSA 180 (278)
Q Consensus 144 ~~~dG~F~f~nVP--~GsY~LeVss~gy~F--~p~RVdV~~ 180 (278)
-+.||+|.+.=.| +|.|.|+|...|-.- .|++|.|..
T Consensus 77 d~~dGty~v~Y~p~~~G~~~i~V~~~g~~I~gSPF~v~v~~ 117 (128)
T 2dib_A 77 DNADGTYQVEYTPFEKGLHVVEVTYDDVPIPNSPFKVAVTE 117 (128)
T ss_dssp ECSSSEEEEEECCSSCSEEEEEEBSSSCBCTTCSEEEECCC
T ss_pred ECCCCEEEEEEEeCCCEeEEEEEEECCEECCCCCEEEEEee
Confidence 3568999998887 499999999888654 477888754
No 44
>3rgh_A Filamin-A; cell adhesion, cytoskeleton-complex, disease mutation, immun like, cytoskeleton, actin-binding, cell junction, shape; HET: CME; 2.44A {Homo sapiens} SCOP: b.1.18.0
Probab=55.50 E-value=14 Score=27.96 Aligned_cols=36 Identities=17% Similarity=0.236 Sum_probs=25.7
Q ss_pred ecCCccEEEccCC--CeeEEEEEEecCcce--eeEEEEEE
Q 023727 144 LRPDGYFSFQNMS--AGTHLIEVAAIGYFF--SPVRVDVS 179 (278)
Q Consensus 144 ~~~dG~F~f~nVP--~GsY~LeVss~gy~F--~p~RVdV~ 179 (278)
-+.||+|.+.=.| +|.|.|.|..-|-.- .|++|.|.
T Consensus 59 d~~dGty~V~Y~p~~~G~y~i~V~~~g~~V~gSPf~v~V~ 98 (100)
T 3rgh_A 59 DHGDGTHTITYIPLCPGAYTVTIKYGGQPVPNFPSKLQVE 98 (100)
T ss_dssp ECSSSEEEEEEECCSSEEEEEEEEETTEECTTCSEEEEEE
T ss_pred eCCCCEEEEEEEeCCCeeEEEEEEECCEECCCCCEEEEEe
Confidence 4568999887776 499999998877432 35666664
No 45
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=54.59 E-value=11 Score=37.06 Aligned_cols=28 Identities=18% Similarity=0.348 Sum_probs=21.5
Q ss_pred EEEec-CCccEEEccCCCeeEEEEEEecC
Q 023727 141 VTFLR-PDGYFSFQNMSAGTHLIEVAAIG 168 (278)
Q Consensus 141 ~a~~~-~dG~F~f~nVP~GsY~LeVss~g 168 (278)
|..+. ....-+|.|+|||+|+++|.+.+
T Consensus 702 W~~~~~~~~~~~ytnL~pG~Y~f~V~a~~ 730 (758)
T 3ott_A 702 WNFLKSNINRITYSNLSYGNYQLIISKLE 730 (758)
T ss_dssp CEECCTTCCEEEECSCCSEEEEEEEEEBC
T ss_pred ccCCCCCcceEEecCCCCccEEEEEEEeC
Confidence 44443 34567899999999999998765
No 46
>2x9x_A RRGB, cell WALL surface anchor family protein; cell adhesion; 1.50A {Streptococcus pneumoniae} PDB: 2x9w_A 2x9y_A
Probab=54.15 E-value=7.9 Score=37.32 Aligned_cols=52 Identities=12% Similarity=0.109 Sum_probs=34.7
Q ss_pred eeEEEEEcCc------eeEEEecCCccEEEccC-CCeeEEEE-EEecCccee------eEEEEEEc
Q 023727 129 SNVKVVLNGG------EHVTFLRPDGYFSFQNM-SAGTHLIE-VAAIGYFFS------PVRVDVSA 180 (278)
Q Consensus 129 s~t~V~L~g~------~~~a~~~~dG~F~f~nV-P~GsY~Le-Vss~gy~F~------p~RVdV~~ 180 (278)
+.+.+.|... .....++.+|.|.|.++ ++|.|.|. +...||... +..|.|..
T Consensus 180 ~~A~F~L~~~~~~~~v~~~~ttd~~G~~~~~~L~~~G~Y~v~Et~a~GY~l~~~~~~~~~~vtI~~ 245 (444)
T 2x9x_A 180 AEATFDLVNAQAGKVVQTVTLTTDKNTVTVNGLDKNTEYKFVERSIKGYSADYQEITTAGEIAVKN 245 (444)
T ss_dssp SCEEEEEEETTTCCEEEEEEECTTCCEEEECSCCTTSCEEEEECCBTTBEEEECCCCSTTEEEEEE
T ss_pred CceEEEEEECCCCcEEEEEEEeCCCceEEEcCCCCCCcEEEEEEecCceEecccccCCcEEEEEec
Confidence 4466666532 12356899999999999 99988874 445777654 34555553
No 47
>2d7m_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=54.12 E-value=20 Score=27.52 Aligned_cols=37 Identities=22% Similarity=0.308 Sum_probs=28.9
Q ss_pred ecCCccEEEccCC--CeeEEEEEEecCcce--eeEEEEEEc
Q 023727 144 LRPDGYFSFQNMS--AGTHLIEVAAIGYFF--SPVRVDVSA 180 (278)
Q Consensus 144 ~~~dG~F~f~nVP--~GsY~LeVss~gy~F--~p~RVdV~~ 180 (278)
-+.||+|.+.=.| +|.|.|.|..-|-.- .|++|.|..
T Consensus 64 d~~dGty~v~Y~p~~~G~y~i~V~~~g~~I~gSPF~v~v~~ 104 (115)
T 2d7m_A 64 DNGDGTYTVSYLPDMSGRYTITIKYGGDEIPYSPFRIHALP 104 (115)
T ss_dssp ECSSSCEEEEECCCSCEEEEEEEEESSCBCTTCSEEEEEEC
T ss_pred ECCCCEEEEEEEeCCCceEEEEEEECCEECCCCCEEEEEee
Confidence 3468999988777 499999999888655 578888864
No 48
>2dia_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=52.31 E-value=18 Score=27.80 Aligned_cols=38 Identities=24% Similarity=0.316 Sum_probs=29.6
Q ss_pred EecCCccEEEccCC--CeeEEEEEEecCcce--eeEEEEEEc
Q 023727 143 FLRPDGYFSFQNMS--AGTHLIEVAAIGYFF--SPVRVDVSA 180 (278)
Q Consensus 143 ~~~~dG~F~f~nVP--~GsY~LeVss~gy~F--~p~RVdV~~ 180 (278)
.-+.||+|.+.=.| +|.|.|.|..-|-.- .|++|.|..
T Consensus 61 ~d~~dGty~v~Y~p~~~G~y~i~V~~~g~~V~gSPf~v~v~~ 102 (113)
T 2dia_A 61 QNNKDGTYAVTYVPLTAGMYTLTMKYGGELVPHFPARVKVEP 102 (113)
T ss_dssp EECTTSEEEEEEECSSCEEEEEEEEETTEECTTCSEEEEEEC
T ss_pred EECCCCEEEEEEEeCCCccEEEEEEECCEECCCCCEEEEEcc
Confidence 44569999988777 499999999888554 468888874
No 49
>3fcg_A F1 capsule-anchoring protein; beta barrel, beta strand swapping, cell membrane, cell outer membrane, cell projection, fimbrium, membrane; 2.85A {Yersinia pestis}
Probab=50.29 E-value=82 Score=24.03 Aligned_cols=29 Identities=28% Similarity=0.411 Sum_probs=19.0
Q ss_pred eeEEEEEcCceeEEEecCCccEEEccCCC
Q 023727 129 SNVKVVLNGGEHVTFLRPDGYFSFQNMSA 157 (278)
Q Consensus 129 s~t~V~L~g~~~~a~~~~dG~F~f~nVP~ 157 (278)
+.++|..||-....-.=+-|-|.|.|+++
T Consensus 27 A~V~v~qnG~~iy~~~VppGpF~I~dl~~ 55 (90)
T 3fcg_A 27 ARVEVLRDGYTVSNELVPSGPFELANLPL 55 (90)
T ss_dssp EEEEEESSSCEEEEEEECSEEEEECCCC-
T ss_pred cEEEEEECCEEEEEeEeCCCCeEEcCCcc
Confidence 55666777764443344568999999987
No 50
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=49.91 E-value=74 Score=23.41 Aligned_cols=59 Identities=14% Similarity=0.044 Sum_probs=31.2
Q ss_pred CCceEEEEEEECCCCCCCCCCCCCCCceeEEEEEcC--c-ee---EEEecCCccEEE-----ccCCCeeEEEEEEec
Q 023727 102 GDGFSISGRVKLPGMSLKAFGSPGGKASNVKVVLNG--G-EH---VTFLRPDGYFSF-----QNMSAGTHLIEVAAI 167 (278)
Q Consensus 102 ~~~~tIsGrV~~p~~~p~~~~lp~~~~s~t~V~L~g--~-~~---~a~~~~dG~F~f-----~nVP~GsY~LeVss~ 167 (278)
+++..+++-+...+..| .. ...++|.|.+ | .. ....+.+|.|.+ .+.+.|.|.|.+...
T Consensus 16 GetV~~~~~~~~~~~~p------~~-~~~~~v~l~dp~g~~v~~~~~~~~~~G~~~~~f~Lp~~~~~G~y~i~~~~~ 85 (102)
T 2p9r_A 16 GQTVKFRVVSMDENFHP------LN-ELIPLVYIQDPKGNRIAQWQSFQLEGGLKQFSFPLSSEPFQGSYKVVVQKK 85 (102)
T ss_dssp TCEEEEEEEEECGGGCB------CC-CEEEEEEEECTTSCEEEEEEEEECBTTEEEEEEECCSSCCCEEEEEEEECT
T ss_pred CCEEEEEEEEECCCCcC------CC-CCceEEEEECCCCCEEEEEEeecCCCCEEEEEEECCCCCCCeeEEEEEEEC
Confidence 35555666555433322 11 2335666643 2 21 233456776654 334569999999864
No 51
>2w0p_A Filamin-A; alternative splicing, cytoskeleton/complex, phosphoprotein, disease mutation, immunoglobulin like, zinc, complex; 1.90A {Homo sapiens} SCOP: b.1.18.10 PDB: 2brq_A* 2jf1_A 3isw_A
Probab=49.68 E-value=20 Score=26.51 Aligned_cols=38 Identities=24% Similarity=0.157 Sum_probs=26.2
Q ss_pred EEecCCccEEEccCC--CeeEEEEEEecCcce--eeEEEEEE
Q 023727 142 TFLRPDGYFSFQNMS--AGTHLIEVAAIGYFF--SPVRVDVS 179 (278)
Q Consensus 142 a~~~~dG~F~f~nVP--~GsY~LeVss~gy~F--~p~RVdV~ 179 (278)
..-+.||+|.+.=.| +|.|.|.|...+-.- .|+.|.|.
T Consensus 50 v~d~~dGty~v~Y~p~~~G~y~I~V~~~g~~I~gSPF~v~v~ 91 (94)
T 2w0p_A 50 FEDRKDGSCGVAYVVQEPGDYEVSVKFNEEHIPDSPFVVPVA 91 (94)
T ss_dssp EEECTTSCEEEEEECSSCEEEEEEEEETTEECTTCSEEEEEE
T ss_pred EEECCCCEEEEEEEECCCceEEEEEEECCEECCCCCEEEEEe
Confidence 344568988887776 499999998776432 35666664
No 52
>1v05_A Filamin C; actin-binding protein, immunoglobulin; 1.43A {Homo sapiens} SCOP: b.1.18.10 PDB: 2eed_A
Probab=49.44 E-value=20 Score=26.54 Aligned_cols=26 Identities=8% Similarity=-0.033 Sum_probs=19.9
Q ss_pred ecCCccEEEccCC--CeeEEEEEEecCc
Q 023727 144 LRPDGYFSFQNMS--AGTHLIEVAAIGY 169 (278)
Q Consensus 144 ~~~dG~F~f~nVP--~GsY~LeVss~gy 169 (278)
-+.||+|.+.=.| +|.|.|+|..-|-
T Consensus 57 d~~dGty~v~Y~p~~~G~y~i~V~~~g~ 84 (96)
T 1v05_A 57 HMGNRVYNVTYTVKEKGDYILIVKWGDE 84 (96)
T ss_dssp ECSTTEEEEEEECSSCEEEEEEEEETTE
T ss_pred eCCCCEEEEEEEeCCCEEEEEEEEECCE
Confidence 3468888887666 4999999987774
No 53
>3pf2_A Cell WALL surface anchor family protein; pilus shaft component, IGG-DEV fold, IGG-REV fold, CNA A TYP type, IG-like fold; 1.70A {Streptococcus agalactiae serogroup V} PDB: 3pg2_A
Probab=48.63 E-value=21 Score=32.88 Aligned_cols=39 Identities=28% Similarity=0.434 Sum_probs=30.7
Q ss_pred EecCCccEEEccCCC-------e----eEEEEEEec-Ccce--eeEEEEEEcC
Q 023727 143 FLRPDGYFSFQNMSA-------G----THLIEVAAI-GYFF--SPVRVDVSAR 181 (278)
Q Consensus 143 ~~~~dG~F~f~nVP~-------G----sY~LeVss~-gy~F--~p~RVdV~~~ 181 (278)
.++.+|.|.|.+++. | +|+.|+..+ ||.. .|+.+.|.+.
T Consensus 241 tt~~~G~~~~~gL~~~~~~~~~G~~~~Y~l~EtkAP~GY~l~~~~~~f~v~~~ 293 (319)
T 3pf2_A 241 KSHTDGTFEIKGLAYAVDANAEGTAVTYKLKETKAPEGYVIPDKEIEFTVSQT 293 (319)
T ss_dssp ECCTTSEEEEEEECCSTTSCTTCCCEEEEEEEEECCTTBCCCSSCEEEEECTT
T ss_pred EECCCCEEEEccccccccccCCCCcceEEEEEeeCCCCcccCCCcEEEEEecC
Confidence 578999999999995 7 566788877 7887 4677777764
No 54
>2hsi_A Putative peptidase M23; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.90A {Pseudomonas aeruginosa PAO1}
Probab=46.87 E-value=69 Score=28.98 Aligned_cols=47 Identities=15% Similarity=0.136 Sum_probs=27.9
Q ss_pred EEEEEcCceeEEEecCCccE-EE----ccCCCeeEEEEEEecCcceeeEEEEE
Q 023727 131 VKVVLNGGEHVTFLRPDGYF-SF----QNMSAGTHLIEVAAIGYFFSPVRVDV 178 (278)
Q Consensus 131 t~V~L~g~~~~a~~~~dG~F-~f----~nVP~GsY~LeVss~gy~F~p~RVdV 178 (278)
.+|.+++..+..+...++.| .+ .+.++|.|.+++...+ ...++.+.|
T Consensus 51 ~~v~~~~~~~~~~~~~~~~~~al~~~~~~~~~g~~~~~v~~~~-~~~~~~~~v 102 (282)
T 2hsi_A 51 PRAFYQGKPVLVVREEGRRWIAVVGIPLSTKPGPQKLEVRAAT-GNHEERFSV 102 (282)
T ss_dssp CEEEETTEEEEEEESTTSSEEEEEECCTTCCSEEEEEEEECTT-CCEEEEEEE
T ss_pred cEEEECCEEeeEEecCCCEEEEEEEecCCCCCCcEEEEEEeCC-ceEEEEEEE
Confidence 34777777666655555434 44 3445789888887666 333344444
No 55
>2qsq_A Carcinoembryonic antigen-related cell adhesion MO; glycoprotein, GPI-anchor, immunoglobulin DOMA lipoprotein, membrane; 1.95A {Homo sapiens} PDB: 2qst_A 2ver_N* 2gk2_A
Probab=46.36 E-value=48 Score=25.02 Aligned_cols=32 Identities=16% Similarity=0.205 Sum_probs=25.7
Q ss_pred EEecCCccEEEccCCC---eeEEEEEEecCcceee
Q 023727 142 TFLRPDGYFSFQNMSA---GTHLIEVAAIGYFFSP 173 (278)
Q Consensus 142 a~~~~dG~F~f~nVP~---GsY~LeVss~gy~F~p 173 (278)
..+.+||+-.|+||.. |.|++.+...++....
T Consensus 66 ~~~~~ngSL~I~nvt~~D~G~Ytc~v~~~~~~~~~ 100 (111)
T 2qsq_A 66 EIIYPNASLLIQNIIQNDAGFYTLHVIKSDLVNEE 100 (111)
T ss_dssp EEECTTSCEEECSCCGGGCEEEEEEEEETTSCCEE
T ss_pred EEEecCCcEEEccCcccCCeEEEEEEEeCCCcEEE
Confidence 4456799999999985 9999999998764433
No 56
>3cnk_A Filamin-A; FLNA24, X-RAY crystalography, homodimer, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; 1.65A {Homo sapiens}
Probab=46.34 E-value=19 Score=26.32 Aligned_cols=34 Identities=24% Similarity=0.152 Sum_probs=23.2
Q ss_pred cCCccEEEccCC--CeeEEEEEEecCcce--eeEEEEE
Q 023727 145 RPDGYFSFQNMS--AGTHLIEVAAIGYFF--SPVRVDV 178 (278)
Q Consensus 145 ~~dG~F~f~nVP--~GsY~LeVss~gy~F--~p~RVdV 178 (278)
+.||+|.+.=.| +|.|.|+|...|-.- .|++|.|
T Consensus 51 ~~dGty~v~Y~p~~~G~y~i~V~~~g~~I~gSPF~v~V 88 (89)
T 3cnk_A 51 VGSRLYSVSYLLKDKGEYTLVVKWGHEHIPGSPYRVVV 88 (89)
T ss_dssp EETTEEEEEEECCSCEEEEEEEEETTEECTTCSEEEEE
T ss_pred CCCCEEEEEEEECCCccEEEEEEECCEECCCCCEEEEE
Confidence 458888887766 599999998877432 2444443
No 57
>2x9x_A RRGB, cell WALL surface anchor family protein; cell adhesion; 1.50A {Streptococcus pneumoniae} PDB: 2x9w_A 2x9y_A
Probab=46.24 E-value=11 Score=36.38 Aligned_cols=42 Identities=24% Similarity=0.340 Sum_probs=31.2
Q ss_pred eEEEecCCccEEEccCCCeeEEE-EEEec-Cccee--eEEEEEEcC
Q 023727 140 HVTFLRPDGYFSFQNMSAGTHLI-EVAAI-GYFFS--PVRVDVSAR 181 (278)
Q Consensus 140 ~~a~~~~dG~F~f~nVP~GsY~L-eVss~-gy~F~--p~RVdV~~~ 181 (278)
....+|.+|.|.|.++++|.|.| |+..+ ||... ++.+.|...
T Consensus 370 ~~~~td~~G~~~~~~L~~G~Y~l~EtkAP~GY~l~~~~~~f~i~~~ 415 (444)
T 2x9x_A 370 VKLVSDAQGRFEITGLLAGTYYLEETKQPAGYALLTSRQKFEVTAT 415 (444)
T ss_dssp CCEECCTTCEEEEEEECSEEEEEEEEECCTTSCCCCSCEEEEECTT
T ss_pred eEEEECCCCeEEECCCCCceEEEEEeeCCCCcccCCCcEEEEEeCC
Confidence 34568899999999999998776 55553 67665 577777653
No 58
>2dic_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=45.54 E-value=31 Score=26.17 Aligned_cols=38 Identities=26% Similarity=0.280 Sum_probs=27.5
Q ss_pred EecCCccEEEccCC--CeeEEEEEEecCcce--eeEEEEEEc
Q 023727 143 FLRPDGYFSFQNMS--AGTHLIEVAAIGYFF--SPVRVDVSA 180 (278)
Q Consensus 143 ~~~~dG~F~f~nVP--~GsY~LeVss~gy~F--~p~RVdV~~ 180 (278)
.-+.||+|.+.=.| +|.|.|.|..-|-.- .|+.|.|..
T Consensus 59 ~d~~dGty~v~Y~p~~~G~y~I~V~~~g~~I~gSPF~v~v~~ 100 (105)
T 2dic_A 59 RDNKDGSCSAEYIPFAPGDYDVNITYGGAHIPGSPFRVPVKD 100 (105)
T ss_dssp EECSSSCEEEEECCSSCEEEEEEEEETTEECTTCSEEEEEEC
T ss_pred EECCCCeEEEEEEeCCCeEEEEEEEECCEECCCCCEEEEEcc
Confidence 34678999888876 499999999877433 356666653
No 59
>2xtl_A Cell WALL surface anchor family protein; GRAM-positive PILI protein, BP-2A 515 allele, immunoglobulin domains, structural protein; 1.75A {Streptococcus agalactiae}
Probab=45.13 E-value=9.8 Score=36.91 Aligned_cols=40 Identities=25% Similarity=0.350 Sum_probs=30.8
Q ss_pred EEecCCccEEEccCCCeeEEE-EEEec-Cccee--eEEEEEEcC
Q 023727 142 TFLRPDGYFSFQNMSAGTHLI-EVAAI-GYFFS--PVRVDVSAR 181 (278)
Q Consensus 142 a~~~~dG~F~f~nVP~GsY~L-eVss~-gy~F~--p~RVdV~~~ 181 (278)
-.+|.||.|.|.++++|.|.| |+..+ ||... ++.+.|...
T Consensus 378 ~ttd~~G~~~~~~L~~G~Y~l~EtkAP~GY~l~~~~~~f~i~~~ 421 (452)
T 2xtl_A 378 LISNDKGQFEITGLTEGQYSLEETQAPTGYAKLSGDVSFNVNAT 421 (452)
T ss_dssp EECCTTSEEEEEEECSEEEEEEEEECCTTBCCCSSCEEEEECTT
T ss_pred EEeCCCCeEEECCCCCceEEEEEeeCCCCcccCCCCEEEEEeCC
Confidence 357889999999999998776 56554 78765 677777653
No 60
>2bp3_A Filamin A; structural protein, cytoskeleton/complex, actin binding protein, cytoskeleton, complex; 2.32A {Homo sapiens} SCOP: b.1.18.10 PDB: 2aav_A
Probab=43.90 E-value=30 Score=25.62 Aligned_cols=38 Identities=24% Similarity=0.177 Sum_probs=27.0
Q ss_pred EEecCCccEEEccCC--CeeEEEEEEecCcce--eeEEEEEE
Q 023727 142 TFLRPDGYFSFQNMS--AGTHLIEVAAIGYFF--SPVRVDVS 179 (278)
Q Consensus 142 a~~~~dG~F~f~nVP--~GsY~LeVss~gy~F--~p~RVdV~ 179 (278)
..-+.||+|.+.=.| +|.|.|+|...+-.- .|+.|.|.
T Consensus 53 v~d~~dGty~v~Y~p~~~G~y~i~V~~~g~~I~gSPF~v~v~ 94 (97)
T 2bp3_A 53 CTDNQDGTCSVSYLPVLPGDYSILVKYNEQHVPGSPFTARVT 94 (97)
T ss_dssp EEECSSSEEEEEEECSSCEEEEEEEEETTEECTTCSEEEEEE
T ss_pred EEECCCCEEEEEEEeCCCCcEEEEEEECCEECCCcCEEEEEe
Confidence 345668998887776 599999999877322 35666665
No 61
>2ki0_A DS119; beta-alpha-beta, de novo protein; NMR {Synthetic}
Probab=43.78 E-value=14 Score=23.61 Aligned_cols=16 Identities=31% Similarity=0.684 Sum_probs=13.6
Q ss_pred CHHHHHHHHHHHHhCC
Q 023727 249 DPEEMRRAQEEMRSQG 264 (278)
Q Consensus 249 DPEe~ke~qeem~~~~ 264 (278)
.|||+|+++||..+.+
T Consensus 13 tpeelkklkeeakkan 28 (36)
T 2ki0_A 13 TPEELKKLKEEAKKAN 28 (36)
T ss_dssp CHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHhcc
Confidence 6999999999987654
No 62
>2dlg_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=43.48 E-value=30 Score=26.49 Aligned_cols=38 Identities=16% Similarity=0.215 Sum_probs=29.8
Q ss_pred ecCCccEEEccCCC--eeEEEEEEecCccee--eEEEEEEcC
Q 023727 144 LRPDGYFSFQNMSA--GTHLIEVAAIGYFFS--PVRVDVSAR 181 (278)
Q Consensus 144 ~~~dG~F~f~nVP~--GsY~LeVss~gy~F~--p~RVdV~~~ 181 (278)
-..||+|.+.=+|. |.|.|.|...|..-+ |++|.|...
T Consensus 51 d~~dGty~v~ytP~e~G~h~v~V~~~g~~I~GSPF~v~V~~~ 92 (102)
T 2dlg_A 51 PMGKNSHCVRFVPQEMGVHTVSVKYRGQHVTGSPFQFTVGPL 92 (102)
T ss_dssp ECSSSEEEEEBCCCTTCEEEEEEESSSSBCSSCSEEEEBCCC
T ss_pred ECCCCEEEEEEEecCCEeEEEEEEECCEeCCCCCeEEEECCC
Confidence 35589999988874 999999998885543 788888754
No 63
>2e9j_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=43.40 E-value=22 Score=27.54 Aligned_cols=36 Identities=25% Similarity=0.398 Sum_probs=27.3
Q ss_pred cCCccEEEccCC--CeeEEEEEEecCcce--eeEEEEEEc
Q 023727 145 RPDGYFSFQNMS--AGTHLIEVAAIGYFF--SPVRVDVSA 180 (278)
Q Consensus 145 ~~dG~F~f~nVP--~GsY~LeVss~gy~F--~p~RVdV~~ 180 (278)
+.||+|.+.=.| +|.|.|.|..-|-.- .|++|.|..
T Consensus 75 ~~dGty~v~Y~p~~~G~y~i~V~~~g~~V~gSPF~v~v~~ 114 (119)
T 2e9j_A 75 NKDGTYAVTYIPDKTGRYMIGVTYGGDDIPLSPYRIRATQ 114 (119)
T ss_dssp CCSSEEEEEECCCSCSEEEECCEESSCBCTTCSEEEEEEC
T ss_pred CCCCEEEEEEEeCCCEEEEEEEEECCEECCCCCEEEEEec
Confidence 568999988776 499999999887544 467777764
No 64
>2di8_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=42.97 E-value=36 Score=26.18 Aligned_cols=38 Identities=18% Similarity=0.204 Sum_probs=28.4
Q ss_pred EecCCccEEEccCC--CeeEEEEEEecCcce--eeEEEEEEc
Q 023727 143 FLRPDGYFSFQNMS--AGTHLIEVAAIGYFF--SPVRVDVSA 180 (278)
Q Consensus 143 ~~~~dG~F~f~nVP--~GsY~LeVss~gy~F--~p~RVdV~~ 180 (278)
.-+.||+|.+.=.| +|.|.|.|...|-.- .|+.|.|..
T Consensus 59 ~d~~dGty~v~Y~p~~~G~y~I~V~~~g~~I~gSPF~v~v~~ 100 (111)
T 2di8_A 59 EDLEDGTCKVSYFPTVPGVYIVSTKFADEHVPGSPFTVKISG 100 (111)
T ss_dssp CBCTTSCEEEEECCCSCSEEEEEEEESSCBCTTCSEEEEEEC
T ss_pred EECCCCEEEEEEEeCCCeEEEEEEEECCEECCCCCEEEEECC
Confidence 34568999888776 499999999887533 467777764
No 65
>2dmb_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=42.92 E-value=30 Score=27.25 Aligned_cols=36 Identities=28% Similarity=0.298 Sum_probs=27.4
Q ss_pred cCCccEEEccCC--CeeEEEEEEecCcce--eeEEEEEEc
Q 023727 145 RPDGYFSFQNMS--AGTHLIEVAAIGYFF--SPVRVDVSA 180 (278)
Q Consensus 145 ~~dG~F~f~nVP--~GsY~LeVss~gy~F--~p~RVdV~~ 180 (278)
+.||+|.+.=.| +|.|.|+|..-|-.- .|+.|.|..
T Consensus 64 ~~dGty~V~Y~p~~~G~y~I~V~~~g~~I~gSPF~v~v~~ 103 (124)
T 2dmb_A 64 NEDGTYDIFYTAAKPGTYVIYVRFGGVDIPNSPFTVMATD 103 (124)
T ss_dssp CTTSCEEEEEECSSCEEEEEEEEESSCBCTTCSEEEEEEC
T ss_pred CCCCEEEEEEEcCCCEEEEEEEEECCEECCCCCeEEEEEc
Confidence 468999887776 499999999887544 367777764
No 66
>2d7o_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=42.70 E-value=32 Score=26.42 Aligned_cols=39 Identities=18% Similarity=0.166 Sum_probs=28.8
Q ss_pred EecCCccEEEccCC--CeeEEEEEEecCcce--eeEEEEEEcC
Q 023727 143 FLRPDGYFSFQNMS--AGTHLIEVAAIGYFF--SPVRVDVSAR 181 (278)
Q Consensus 143 ~~~~dG~F~f~nVP--~GsY~LeVss~gy~F--~p~RVdV~~~ 181 (278)
.-+.||+|.+.=.| +|.|.|+|...+-.- .|+.|.|...
T Consensus 59 ~d~~dGty~V~Y~p~~~G~y~I~V~~~g~~I~gSPF~v~v~~~ 101 (111)
T 2d7o_A 59 KDNKDGTCTVSYLPTAPGDYSIIVRFDDKHIPGSPFTAKITGD 101 (111)
T ss_dssp CCCSSSEEEEEECCSSCEEEEEECBBSSCBCTTCSEEEEEECC
T ss_pred EECCCCEEEEEEEeCCCeEEEEEEEECCEECCCcCEEEEEECC
Confidence 34568999988776 599999998777433 3678888743
No 67
>3uaf_A TTR-52; beta barrel/sandwich, cell engulfment, secreted, protein BIN; 2.01A {Caenorhabditis elegans}
Probab=42.03 E-value=38 Score=26.96 Aligned_cols=45 Identities=18% Similarity=0.185 Sum_probs=31.1
Q ss_pred CCceEEEEEEECCCCCCCCCCCCCCCceeEEEEEcC----c-----e-eEEEecCCccEEEcc
Q 023727 102 GDGFSISGRVKLPGMSLKAFGSPGGKASNVKVVLNG----G-----E-HVTFLRPDGYFSFQN 154 (278)
Q Consensus 102 ~~~~tIsGrV~~p~~~p~~~~lp~~~~s~t~V~L~g----~-----~-~~a~~~~dG~F~f~n 154 (278)
.|+..|+|++.=.+. | ....+++|.|-+ + . -.+++|++|+|.+..
T Consensus 2 tqsV~V~G~L~C~~~-P-------a~~~~V~V~L~d~~~~~~d~Ddll~~~~Td~~G~F~l~G 56 (117)
T 3uaf_A 2 TSCLMATGVLKCPTD-P-------EAVKKVHIDLWDAAAAAAESDDLMGRTWSDRNGNFQVTG 56 (117)
T ss_dssp CEEEEEEEEEECTTC-G-------GGGSSCEEEEEEHHHHHTTSCCEEEEEECCTTSEEEEEE
T ss_pred cEEEEEEEEEEeCCc-c-------CCCCCEEEEEEecccccCCchHhheeeEECCCCEEEEEE
Confidence 366899999986543 2 113568887752 1 1 258999999999975
No 68
>2wz8_A Cellulosome protein dockerin type I; sugar binding protein; 1.50A {Clostridium thermocellum}
Probab=41.55 E-value=41 Score=27.56 Aligned_cols=45 Identities=24% Similarity=0.360 Sum_probs=30.3
Q ss_pred CceeEEEec--CCccEEEccC--C-CeeEEEEEEecCcc------------eeeEEEEEEcC
Q 023727 137 GGEHVTFLR--PDGYFSFQNM--S-AGTHLIEVAAIGYF------------FSPVRVDVSAR 181 (278)
Q Consensus 137 g~~~~a~~~--~dG~F~f~nV--P-~GsY~LeVss~gy~------------F~p~RVdV~~~ 181 (278)
|+.+.+... .+++-+|.|| | .|.|.|.|....-. .+...|.|+..
T Consensus 34 Gg~~Vg~ig~~~~~~vtf~~V~~~~aG~Y~l~irYang~~~~~~~y~~~~~~r~~~v~VNG~ 95 (156)
T 2wz8_A 34 GGQYVGWIGNGSNNYLQFNNVYVPQAGTYRMVVQFANAEVFGQHSYNNNVVDRYCSISVNGG 95 (156)
T ss_dssp GGEEEECCBSSTTSCEEEEEEEESSCEEEEEEEEEECCCBC-------CBCCEEEEEEETTC
T ss_pred CCcEEEeccCCCCCEEEEEEEecCCCcEEEEEEEEECCCcccccccCCccCcceEEEEECCc
Confidence 356666665 3456666655 4 69999999875442 57788888754
No 69
>2nqc_A Filamin-C; immunoglobulin, metal binding, immune system; 2.05A {Homo sapiens} SCOP: b.1.18.10 PDB: 2d7q_A 2k3t_A
Probab=41.33 E-value=1.3e+02 Score=24.20 Aligned_cols=49 Identities=22% Similarity=0.310 Sum_probs=31.6
Q ss_pred EEEEEcCc---eeEEEecCCccEEEccCC--CeeEEEEEEecC-c--ceeeEEEEEEc
Q 023727 131 VKVVLNGG---EHVTFLRPDGYFSFQNMS--AGTHLIEVAAIG-Y--FFSPVRVDVSA 180 (278)
Q Consensus 131 t~V~L~g~---~~~a~~~~dG~F~f~nVP--~GsY~LeVss~g-y--~F~p~RVdV~~ 180 (278)
.+|.+.|- .....-+.|| |.+.=.| +|.|.|.|...+ . .=.|++|.|..
T Consensus 78 l~v~I~gPs~~~~~~~d~~dG-y~V~YtP~~~G~y~I~Vk~~g~~hI~GSPF~v~V~~ 134 (138)
T 2nqc_A 78 LSVTIDGPSKVQLDCRECPEG-HVVTYTPMAPGNYLIAIKYGGPQHIVGSPFKAKVTG 134 (138)
T ss_dssp EEEEEESSSCCEEEEEEETTE-EEEEEECCSCEEEEEEEEESSSCBCTTCSEEEEEES
T ss_pred EEEEEECCCCCeeeEEECCCc-EEEEEEcCCCEEEEEEEEECCcccCCCCCeEEEEec
Confidence 45555441 2234456788 8877766 599999999888 3 33467777764
No 70
>2g2n_A Transthyretin-like protein; transthyretin-related protein, unknown functi; 1.65A {Escherichia coli} PDB: 2g2p_A 2igl_A 2gpz_A
Probab=40.61 E-value=69 Score=25.51 Aligned_cols=43 Identities=23% Similarity=0.303 Sum_probs=29.5
Q ss_pred ceeEEEEEc---Cce----eEEEecCCccEE----EccCCCeeEEEEEEecCcc
Q 023727 128 ASNVKVVLN---GGE----HVTFLRPDGYFS----FQNMSAGTHLIEVAAIGYF 170 (278)
Q Consensus 128 ~s~t~V~L~---g~~----~~a~~~~dG~F~----f~nVP~GsY~LeVss~gy~ 170 (278)
++.+.|.|. +++ ..+.+|.||... =..+.+|.|.|....-+|.
T Consensus 19 Aagv~V~L~~~~~~~~~~l~~~~Tn~DGR~~~l~~~~~~~~G~Y~l~F~tg~Yf 72 (114)
T 2g2n_A 19 AADVTVTLEKKADNGWLQLNTAKTDKDGRIKALWPEQTATTGDYRVVFKTGDYF 72 (114)
T ss_dssp CCSCEEEEEEECSSSEEEEEEEECCTTSEESCCSCSSCCCSEEEEEEECHHHHH
T ss_pred CCCCEEEEEEeCCCCcEEEEEEecCCCCccccccCCCCCCceEEEEEEEhhHhH
Confidence 566777774 321 257799999862 1235579999999887774
No 71
>3osv_A Flagellar basal-BODY ROD modification protein FLG; FLGD, flagellum, P. aeruginosa, structural protein; 2.35A {Pseudomonas aeruginosa}
Probab=38.99 E-value=1.1e+02 Score=24.32 Aligned_cols=40 Identities=28% Similarity=0.323 Sum_probs=24.2
Q ss_pred ceeEEEEEcC--cee-EEEe---cCCc--cEEEcc-------CCCeeEEEEEEec
Q 023727 128 ASNVKVVLNG--GEH-VTFL---RPDG--YFSFQN-------MSAGTHLIEVAAI 167 (278)
Q Consensus 128 ~s~t~V~L~g--~~~-~a~~---~~dG--~F~f~n-------VP~GsY~LeVss~ 167 (278)
...++|.+.+ |+. .++. .+-| .|.+.. +|+|.|.+.|...
T Consensus 36 a~~v~v~I~d~~G~~V~t~~~g~~~aG~~~f~WDG~d~~G~~~~~G~Y~~~v~a~ 90 (138)
T 3osv_A 36 SSNVWVNVYDDKGTVVNRINLGQQAAGSVSFMWDGKDSSGNIMPPGTYKFEAQTS 90 (138)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEEECSEEEEEEECSBCTTSCBCCSEEEEEEEEEE
T ss_pred CcEEEEEEEcCCCCEEEEEEcCCcCCceEEEEECCcCCCCCCCCCccEEEEEEEE
Confidence 3567777753 222 2221 2344 666653 8999999988765
No 72
>2eec_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=38.63 E-value=1.1e+02 Score=24.10 Aligned_cols=39 Identities=26% Similarity=0.341 Sum_probs=29.2
Q ss_pred EEEecCCccEEEccCC--CeeEEEEEEecC---cceeeEEEEEEc
Q 023727 141 VTFLRPDGYFSFQNMS--AGTHLIEVAAIG---YFFSPVRVDVSA 180 (278)
Q Consensus 141 ~a~~~~dG~F~f~nVP--~GsY~LeVss~g---y~F~p~RVdV~~ 180 (278)
...-+.|| |.+.=.| +|.|.|+|...| ..=.|++|.|..
T Consensus 67 ~~~d~~dG-y~V~Y~P~~~G~y~I~V~~~g~~hI~gSPF~v~v~~ 110 (125)
T 2eec_A 67 DCQETPEG-YKVMYTPMAPGNYLISVKYGGPNHIVGSPFKAKVTG 110 (125)
T ss_dssp EEEECSSS-EEEEECCSSCEEEEEEEEESSSCBCTTCSEEEEEES
T ss_pred eeEECCCC-EEEEEEcCCCeEEEEEEEECCcccCCCCCeEEEEcC
Confidence 34456789 8887776 599999999888 334578888875
No 73
>2y1v_A RRGB, cell WALL surface anchor family protein; structural protein, major pilin, pilus assembly; 2.39A {Streptococcus pneumoniae} PDB: 3rpk_A
Probab=37.01 E-value=15 Score=36.78 Aligned_cols=40 Identities=25% Similarity=0.388 Sum_probs=30.7
Q ss_pred EEecCCccEEEccCCCeeEEE-EEEec-Cccee--eEEEEEEcC
Q 023727 142 TFLRPDGYFSFQNMSAGTHLI-EVAAI-GYFFS--PVRVDVSAR 181 (278)
Q Consensus 142 a~~~~dG~F~f~nVP~GsY~L-eVss~-gy~F~--p~RVdV~~~ 181 (278)
..+|.+|.|.|.++++|.|.| |+..+ ||... ++.+.|...
T Consensus 527 ~~t~~~G~~~~~~L~~G~Y~l~EtkAP~GY~l~~~~~~f~i~~~ 570 (605)
T 2y1v_A 527 LVSDAQGRFEITGLLAGTYYLEETKQPAGYALLTSRQKFEVTAT 570 (605)
T ss_dssp EECCTTCEEEEEEECSEEEEEEEEECCTTSCCCSSCEEEEECTT
T ss_pred EeeCCCCEEEECCCCCceEEEEEeeCCCCcccCCCcEEEEEcCC
Confidence 357889999999999997766 56554 78776 677777753
No 74
>4b7l_A Filamin-B; structural protein, FR 1 filamin hinge ABD-1; 2.05A {Homo sapiens} PDB: 2wfn_A
Probab=37.00 E-value=91 Score=28.76 Aligned_cols=27 Identities=19% Similarity=0.333 Sum_probs=20.3
Q ss_pred cCCccEEEccCC--CeeEEEEEEecCcce
Q 023727 145 RPDGYFSFQNMS--AGTHLIEVAAIGYFF 171 (278)
Q Consensus 145 ~~dG~F~f~nVP--~GsY~LeVss~gy~F 171 (278)
+.||+|.+.=+| +|.|.+.|..-|-.-
T Consensus 310 ~~~gty~v~y~P~~~G~~~I~V~~~g~~I 338 (347)
T 4b7l_A 310 DKNKTYSVEYLPKVTGLHKVTVLFAGQHI 338 (347)
T ss_dssp TTCSEEEEEECCCSSSEEEEEEEETTEEC
T ss_pred CCCCEEEEEEEECCCEeEEEEEEECCEEC
Confidence 357888877776 599999998877543
No 75
>2d7p_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10 PDB: 2eeb_A
Probab=36.68 E-value=54 Score=25.34 Aligned_cols=37 Identities=19% Similarity=0.342 Sum_probs=28.5
Q ss_pred cCCccEEEccCCC--eeEEEEEEecCccee--eEEEEEEcC
Q 023727 145 RPDGYFSFQNMSA--GTHLIEVAAIGYFFS--PVRVDVSAR 181 (278)
Q Consensus 145 ~~dG~F~f~nVP~--GsY~LeVss~gy~F~--p~RVdV~~~ 181 (278)
+.||+|.+.=+|. |.|.|+|...+..-+ |+.|.|...
T Consensus 62 ~~~gty~v~ytP~~~G~h~v~V~~~g~~I~GSPF~v~V~~~ 102 (112)
T 2d7p_A 62 LDSDKHTIRFIPHENGVHSIDVKFNGAHIPGSPFKIRVGEQ 102 (112)
T ss_dssp CBTTEEEEEECCSSCEEEEEEEEESSCBCTTCSEEEEECCC
T ss_pred CCCCeEEEEEEcCCCEeEEEEEEECCeEcCCCCEEEEEecC
Confidence 4578999888874 999999998886543 677877643
No 76
>2hr0_A Complement C3 beta chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2i07_A* 2wii_A* 2win_A* 2xwj_A* 3l3o_A* 3l5n_A* 3nms_A* 3nsa_A* 3ohx_A* 3t4a_A 2a74_A* 2a73_A* 2qki_A* 3g6j_A 2ice_A* 2icf_A* 2xwb_A*
Probab=36.34 E-value=45 Score=32.71 Aligned_cols=38 Identities=21% Similarity=0.239 Sum_probs=24.7
Q ss_pred eEEEEEcCc-eeEEEecCCc--cEEEccCCC--eeEEEEEEecC
Q 023727 130 NVKVVLNGG-EHVTFLRPDG--YFSFQNMSA--GTHLIEVAAIG 168 (278)
Q Consensus 130 ~t~V~L~g~-~~~a~~~~dG--~F~f~nVP~--GsY~LeVss~g 168 (278)
...|.|..+ .+...++.+| .|.|. +|. |+|.|+|...+
T Consensus 364 ~~~v~l~~~~~~~~~t~~~G~~~~~i~-~~~~~g~y~l~v~~~~ 406 (645)
T 2hr0_A 364 RVPVAVQGEDTVQSLTQGDGVAKLSIN-THPSQKPLSITVRTKK 406 (645)
T ss_dssp CCCEEESSSCCSCCCCCTTSEEEEEEE-CCSCSSCEEEEEEECC
T ss_pred CEEEEEecCcceeeEECCCCcEEEEEE-CCCCCeEEEEEEEEcC
Confidence 344555544 3445567788 77774 554 89999997754
No 77
>2eea_A Filamin-B; beta-sandwich, immunoglobulin-like fold, interaction with GP1BA, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=36.14 E-value=43 Score=25.70 Aligned_cols=38 Identities=18% Similarity=0.212 Sum_probs=27.0
Q ss_pred EecCCccEEEccCC--CeeEEEEEEecCcce--eeEEEEEEc
Q 023727 143 FLRPDGYFSFQNMS--AGTHLIEVAAIGYFF--SPVRVDVSA 180 (278)
Q Consensus 143 ~~~~dG~F~f~nVP--~GsY~LeVss~gy~F--~p~RVdV~~ 180 (278)
.-+.||+|.+.=.| +|.|.|+|...|-.- .|+.|.|..
T Consensus 69 ~d~~dGty~v~Y~p~~~G~y~I~V~~~g~~I~gSPF~v~v~~ 110 (115)
T 2eea_A 69 IDNKDGTCTVTYLPTLPGDYSILVKYNDKHIPGSPFTAKITD 110 (115)
T ss_dssp BCCSSSEEEEEEECSSCSCEEEEEEESSSBCTTCSEEEEEEC
T ss_pred EECCCCEEEEEEEeCCCeeEEEEEEECCEECCCCCEEEEEeC
Confidence 34558888887776 499999998777433 367777764
No 78
>3g3l_A Putative uncharacterized membrane-associated PROT; YP_211325.1, putative membrane-associated protein of unknown function; 2.20A {Bacteroides fragilis nctc 9343}
Probab=36.08 E-value=38 Score=30.58 Aligned_cols=72 Identities=15% Similarity=0.206 Sum_probs=51.8
Q ss_pred CCceEEEEEEECCCCCCCCCCCCCCCceeEEEEEcCceeEEEecCCccEEEccCCCeeEEEEEEecCcceeeEEEEEEcC
Q 023727 102 GDGFSISGRVKLPGMSLKAFGSPGGKASNVKVVLNGGEHVTFLRPDGYFSFQNMSAGTHLIEVAAIGYFFSPVRVDVSAR 181 (278)
Q Consensus 102 ~~~~tIsGrV~~p~~~p~~~~lp~~~~s~t~V~L~g~~~~a~~~~dG~F~f~nVP~GsY~LeVss~gy~F~p~RVdV~~~ 181 (278)
+..|.|-|.|+.-... +-+..++|+|.|..-.+--++.|+|.-.+ |-++|+..+|.-....|-...-
T Consensus 12 pAKYyIaGtiTdatTG--------q~LttAtVTlgg~sVt~~fN~~v~ykaeg-----yslvVsa~gYy~v~kqVYLnqv 78 (327)
T 3g3l_A 12 EAKYYIAGTITDATTG--------QELTTAKVTLGDKSVTSSFNEQVNYKAEG-----YALVVSADGYYPVKRQVYLNQV 78 (327)
T ss_dssp CCEEEEEEEEEETTTC--------CBCTTCEEEETTEEECSEEEEEECCCTTC-----EEEEEECTTBCCEEEEECCCCC
T ss_pred cceEEEEEEeeecccc--------ceEEEEEEEECCeEEeeeccceeeEeecC-----ceEEEEecCceeeEEEEEcccc
Confidence 4569999999865442 22456899999987776667777776554 8889999999777766666554
Q ss_pred CCCce
Q 023727 182 HPGKV 186 (278)
Q Consensus 182 ~~G~V 186 (278)
.+|.+
T Consensus 79 sdGqt 83 (327)
T 3g3l_A 79 SDGQT 83 (327)
T ss_dssp CTTCE
T ss_pred cCCce
Confidence 45654
No 79
>2k9u_A Gamma filamin; cytoskeletal complex, alternative splicing, cell adhesion, cell junction, cell shape, cytoplasm, cytoskeleton; NMR {Homo sapiens}
Probab=35.69 E-value=48 Score=25.61 Aligned_cols=38 Identities=21% Similarity=0.195 Sum_probs=27.6
Q ss_pred EecCCccEEEccCC--CeeEEEEEEecCcce--eeEEEEEEc
Q 023727 143 FLRPDGYFSFQNMS--AGTHLIEVAAIGYFF--SPVRVDVSA 180 (278)
Q Consensus 143 ~~~~dG~F~f~nVP--~GsY~LeVss~gy~F--~p~RVdV~~ 180 (278)
.-+.||+|.+.=.| +|.|.|.|...|-.- .|+.|.|..
T Consensus 66 ~d~~dGty~v~Y~p~~~G~y~I~V~~~g~~I~gSPF~v~v~~ 107 (119)
T 2k9u_A 66 EDRKDGSCGVSYVVQEPGDYEVSIKFNDEHIPDSPFVVPVAS 107 (119)
T ss_dssp ECCSSSEEEEEEECCSSEEEEEEEEETSCBCSSCSEEEEEES
T ss_pred EECCCCEEEEEEEECCCceEEEEEEECCEECCCCCEEEEEec
Confidence 34568888887776 599999999877433 367777765
No 80
>3bwu_D FIMD, outer membrane usher protein FIMD, N-terminal DOM; usher, N-terminal domain, ternary complex with chaperone and subunit, chaperone, structural protein, mebrane protein; 1.76A {Escherichia coli} SCOP: b.167.1.1 PDB: 1ze3_D 1zdx_A
Probab=35.42 E-value=58 Score=25.30 Aligned_cols=37 Identities=11% Similarity=0.201 Sum_probs=26.1
Q ss_pred cCCCeeEEEEEEecCcceeeEEEEEEc-CCCCceEEEE
Q 023727 154 NMSAGTHLIEVAAIGYFFSPVRVDVSA-RHPGKVQAAL 190 (278)
Q Consensus 154 nVP~GsY~LeVss~gy~F~p~RVdV~~-~~~G~VrA~~ 190 (278)
.++||.|.++|.-.+-......|.... ..++...+..
T Consensus 27 ~~~PG~Y~vdI~vN~~~~~~~~i~f~~~~~~~~~~pCl 64 (125)
T 3bwu_D 27 ELPPGTYRVDIYLNNGYMATRDVTFNTGDSEQGIVPCL 64 (125)
T ss_dssp SSCSEEEEEEEEETTEEEEEEEEEEEECSSTTSEEECC
T ss_pred CcCCcEEEEEEEECCeEccceEEEEEecCCCCcccccC
Confidence 368999999999999888777777754 3223444433
No 81
>3l48_A Outer membrane usher protein PAPC; IG fold, greek KEY, cell outer membrane, fimbrium, transmembrane, transport, transport protein; 2.10A {Escherichia coli} PDB: 2kt6_A
Probab=35.09 E-value=70 Score=24.22 Aligned_cols=49 Identities=18% Similarity=0.323 Sum_probs=33.9
Q ss_pred EEEECCCCCCCCCCCCCCCceeEEEEEcCceeEEEecCCccEEEccCCCeeEEEEEEe
Q 023727 109 GRVKLPGMSLKAFGSPGGKASNVKVVLNGGEHVTFLRPDGYFSFQNMSAGTHLIEVAA 166 (278)
Q Consensus 109 GrV~~p~~~p~~~~lp~~~~s~t~V~L~g~~~~a~~~~dG~F~f~nVP~GsY~LeVss 166 (278)
-++..+++++.||+ +.|.-.+++..+++..+|.--+.++++..- |.|.-
T Consensus 12 l~l~~~dG~plPfG--------A~V~d~~g~~~giVG~~G~vyl~gl~~~g~-L~V~W 60 (94)
T 3l48_A 12 AILRLADGSQPPFG--------ASVTSEKGRELGMVADEGLAWLSGVTPGET-LSVNW 60 (94)
T ss_dssp EEEEETTSCCCCTT--------CEEECTTCCEEEEBCGGGEEEESSCCTTCE-EEEEC
T ss_pred EEEECCCCCcCCCc--------cEEEcCCCceEEEECCCCEEEEECCCCCCE-EEEEE
Confidence 34666777765554 455555667789999999999999987432 45543
No 82
>3qva_A Transthyretin-like protein; transthyretin-related protein, 5-hydroxyisourate hydrolase,; HET: PO4; 1.75A {Klebsiella pneumoniae subsp}
Probab=35.06 E-value=75 Score=25.44 Aligned_cols=43 Identities=19% Similarity=0.216 Sum_probs=30.8
Q ss_pred ceeEEEEEcC--c-eeEEEecCCccEEE---ccCCCeeEEEEEEecCcc
Q 023727 128 ASNVKVVLNG--G-EHVTFLRPDGYFSF---QNMSAGTHLIEVAAIGYF 170 (278)
Q Consensus 128 ~s~t~V~L~g--~-~~~a~~~~dG~F~f---~nVP~GsY~LeVss~gy~ 170 (278)
++.+.|.|.- . -..+.+|.||.... ..+++|.|.|....-+|.
T Consensus 25 Aagv~V~L~~~~~~l~~~~Tn~DGR~~~l~~~~~~~G~Y~L~F~tg~Yf 73 (116)
T 3qva_A 25 AEGVTVSLSREGETLANLVTNAQGRIATFSAAPLPAGRYCLTAETGAWF 73 (116)
T ss_dssp CTTCEEEEEETTEEEEEEECCTTSEECCSCSSCBCSSEEEEEECHHHHH
T ss_pred CCCCEEEEEEccEeEEEeccCCCCCccccccccCCCceEEEEEeHHHHH
Confidence 5678888753 2 23578999998742 235679999999887774
No 83
>2pkd_A SLAM family member 5; signaling lymphocyte activation molecule, IGV, immunoglobulin variable, IGC, immunoglobulin constant, signaling protein; 2.04A {Homo sapiens}
Probab=34.39 E-value=1e+02 Score=22.94 Aligned_cols=38 Identities=8% Similarity=0.097 Sum_probs=28.3
Q ss_pred EEecCCccEEEccCCC---eeEEEEEEecCcc---eeeEEEEEE
Q 023727 142 TFLRPDGYFSFQNMSA---GTHLIEVAAIGYF---FSPVRVDVS 179 (278)
Q Consensus 142 a~~~~dG~F~f~nVP~---GsY~LeVss~gy~---F~p~RVdV~ 179 (278)
.+...+|+-.|.|+.. |.|.++|.+.+.. ...+.+.|-
T Consensus 66 ~l~~~~~SL~I~nl~~~DsG~Y~c~i~~~~~~~~~~~~~~L~V~ 109 (111)
T 2pkd_A 66 HALGPNYNLVISDLRMEDAGDYKADINTQADPYTTTKRYNLQIY 109 (111)
T ss_dssp EECTTTCCEEECSCCGGGCEEEEEEEEESSTTSEEEEEEEEEEE
T ss_pred EEeCCCEEEEECCCCHHHCEEEEEEEEeCCCCceEEEEEEEEEE
Confidence 4445689999999984 9999999988753 345555553
No 84
>2k7q_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=33.90 E-value=2e+02 Score=23.66 Aligned_cols=36 Identities=28% Similarity=0.436 Sum_probs=28.5
Q ss_pred cCCccEEEccCC--CeeEEEEEEecCcce--eeEEEEEEc
Q 023727 145 RPDGYFSFQNMS--AGTHLIEVAAIGYFF--SPVRVDVSA 180 (278)
Q Consensus 145 ~~dG~F~f~nVP--~GsY~LeVss~gy~F--~p~RVdV~~ 180 (278)
..||+|.+.=.| +|.|.|.|.+.+..- .|++|.|..
T Consensus 52 ~~~g~y~v~ftP~~~G~~~i~V~~~g~~V~gSPf~v~V~~ 91 (191)
T 2k7q_A 52 LRNGHVGISFVPKETGEHLVHVKKNGQHVASSPIPVVISQ 91 (191)
T ss_dssp CTTSCEEEECCCSSSEEEEEEEEETTEECTTCSEEEEECG
T ss_pred CCCCEEEEEEEccCCEeEEEEEEECCEECCCCCEEEEEcc
Confidence 678888887676 599999999999644 578888853
No 85
>2k7q_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=33.48 E-value=35 Score=28.40 Aligned_cols=39 Identities=23% Similarity=0.244 Sum_probs=27.3
Q ss_pred EEecCCccEEEccCC--CeeEEEEEEecCcce--eeEEEEEEc
Q 023727 142 TFLRPDGYFSFQNMS--AGTHLIEVAAIGYFF--SPVRVDVSA 180 (278)
Q Consensus 142 a~~~~dG~F~f~nVP--~GsY~LeVss~gy~F--~p~RVdV~~ 180 (278)
..-+.||+|.+.=.| +|.|.|+|...|-.- .|+.|.|..
T Consensus 144 v~d~~dGty~v~Y~p~~~G~y~i~V~~~g~~I~gSPF~v~V~~ 186 (191)
T 2k7q_A 144 TEDLEDGTCRVTYCPTEPGNYIINIKFADQHVPGSPFSVKVTG 186 (191)
T ss_dssp EEECTTSCEEEEEEESSCEEEEEEEEETTEECTTCSEEEEEEC
T ss_pred EEECCCCEEEEEEEeCCCceEEEEEEECCEECCCCCEEEEEcC
Confidence 344667887776655 599999999877443 367777764
No 86
>2ee6_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.53 E-value=36 Score=25.70 Aligned_cols=37 Identities=19% Similarity=0.180 Sum_probs=24.3
Q ss_pred ecCCccEEEccCC--CeeEEEEEEecCcce--eeEEEEEEc
Q 023727 144 LRPDGYFSFQNMS--AGTHLIEVAAIGYFF--SPVRVDVSA 180 (278)
Q Consensus 144 ~~~dG~F~f~nVP--~GsY~LeVss~gy~F--~p~RVdV~~ 180 (278)
-+.||+|.+.=.| +|.|.|.|...+-.- .|+.|.|..
T Consensus 60 d~~dGty~v~Y~p~~~G~y~I~V~~~g~~I~gSPF~v~v~~ 100 (105)
T 2ee6_A 60 DHKNGSCGVSYIAQEPGNYEVSIKFNDEHIPESPYLVPVIA 100 (105)
T ss_dssp CCCSSCCCEEEEESSCEEEEEEEEETTEECTTCSEEEEEEC
T ss_pred ECCCCEEEEEEEECCCceEEEEEEECCEECCCcCEEEEEcC
Confidence 3457877766554 599999988777432 356666654
No 87
>1lkk_A Human P56 tyrosine kinase; complex (tyrosine kinase/peptide); HET: PTR; 1.00A {Homo sapiens} SCOP: d.93.1.1 PDB: 1lcj_A* 1bhf_A* 1bhh_A 1lkl_A* 1bhh_B 1fbz_A* 1ijr_A* 1cwd_L* 1cwe_A*
Probab=30.83 E-value=52 Score=24.37 Aligned_cols=23 Identities=22% Similarity=0.398 Sum_probs=18.7
Q ss_pred cCCccEEEccCC--CeeEEEEEEec
Q 023727 145 RPDGYFSFQNMS--AGTHLIEVAAI 167 (278)
Q Consensus 145 ~~dG~F~f~nVP--~GsY~LeVss~ 167 (278)
.++|+|-++.=. +|.|+|.|...
T Consensus 25 ~~~G~FLVR~S~~~~g~~~LSv~~~ 49 (105)
T 1lkk_A 25 NTHGSFLIRESESTAGSFSLSVRDF 49 (105)
T ss_dssp CCTTCEEEEECSSSTTCEEEEEEEE
T ss_pred CCCceEEEEECCCCCCcEEEEEEEc
Confidence 378999998764 69999998874
No 88
>2di9_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=30.30 E-value=59 Score=25.62 Aligned_cols=38 Identities=18% Similarity=0.276 Sum_probs=28.5
Q ss_pred EecCCccEEEccCC--CeeEEEEEEecCcce--eeEEEEEEc
Q 023727 143 FLRPDGYFSFQNMS--AGTHLIEVAAIGYFF--SPVRVDVSA 180 (278)
Q Consensus 143 ~~~~dG~F~f~nVP--~GsY~LeVss~gy~F--~p~RVdV~~ 180 (278)
.-+.||+|.+.=.| +|.|.|+|...|-.- .|+.|.|..
T Consensus 79 ~d~~dGty~v~Y~p~~~G~y~I~V~~~g~~I~gSPF~v~V~~ 120 (131)
T 2di9_A 79 SDNGDGTCSVSYLPTKPGEYFVNILFEEVHIPGSPFKADIEM 120 (131)
T ss_dssp EECSSSEEEEEEECSSSSEEEEEEEESSCBCTTCSEEEEEEC
T ss_pred EECCCCEEEEEEEeCCCeeEEEEEEECCEECCCcCEEEEECC
Confidence 34568999888776 599999999877544 367777764
No 89
>4g9s_B Inhibitor of G-type lysozyme, goose-type lysozyme; hydrolase inhibitor, hydrolase-hydrolase inhibitor; HET: FLC; 0.95A {Escherichia coli} PDB: 4dy3_A* 4dxz_A* 4dy5_A
Probab=28.78 E-value=1.5e+02 Score=22.54 Aligned_cols=33 Identities=18% Similarity=0.202 Sum_probs=18.0
Q ss_pred CceEEEEEEECCCCCCCCCCCCCCCceeEEEEEcC
Q 023727 103 DGFSISGRVKLPGMSLKAFGSPGGKASNVKVVLNG 137 (278)
Q Consensus 103 ~~~tIsGrV~~p~~~p~~~~lp~~~~s~t~V~L~g 137 (278)
.+.+|+|+|.-.+.. .+.+.+..=...+|.|..
T Consensus 14 ~~a~v~G~I~g~~~~--~Y~~~a~aGQ~l~v~l~s 46 (111)
T 4g9s_B 14 SSAQYSGEIKGYDYD--TYTFYAKKGQKVHVSISN 46 (111)
T ss_dssp SEEEEEEEEETTCCE--EEEEEECTTCEEEEEESC
T ss_pred CCeEEEEEEeCCCce--EEEEEecCCCEEEEEEec
Confidence 457899999865542 222222222455666654
No 90
>1blj_A P55 BLK protein tyrosine kinase; signal transduction, transferase, phosphotransferase, phosphorylation; NMR {Mus musculus} SCOP: d.93.1.1 PDB: 1blk_A
Probab=27.94 E-value=60 Score=24.46 Aligned_cols=35 Identities=17% Similarity=0.286 Sum_probs=25.3
Q ss_pred cCCccEEEccCC--CeeEEEEEEec---CcceeeEEEEEE
Q 023727 145 RPDGYFSFQNMS--AGTHLIEVAAI---GYFFSPVRVDVS 179 (278)
Q Consensus 145 ~~dG~F~f~nVP--~GsY~LeVss~---gy~F~p~RVdV~ 179 (278)
.++|+|-+++=. +|.|+|.|... +-...-++|.-.
T Consensus 33 ~~~G~FLVR~S~~~~g~y~LSv~~~~~~~~~v~H~~I~~~ 72 (114)
T 1blj_A 33 NKAGSFLIRESESNKGAFSLSVKDITTQGEVVKHYKIRSL 72 (114)
T ss_dssp CCTTCEEBCBCTTCSSCEEEEECBCCTTTCBCCCEEEEEE
T ss_pred CCCceEEEEeCCCCCCCEEEEEEEecCCCCcEEEEEEEEc
Confidence 479999999864 69999999875 334455566543
No 91
>2xet_A CAF1A usher, F1 capsule-anchoring protein; transport protein; 1.60A {Yersinia pestis}
Probab=27.57 E-value=1.3e+02 Score=22.06 Aligned_cols=42 Identities=10% Similarity=0.063 Sum_probs=29.3
Q ss_pred EEEECCCCCCCCCCCCCCCceeEEE-EEcCceeEEEecCCccEEEccCCCe
Q 023727 109 GRVKLPGMSLKAFGSPGGKASNVKV-VLNGGEHVTFLRPDGYFSFQNMSAG 158 (278)
Q Consensus 109 GrV~~p~~~p~~~~lp~~~~s~t~V-~L~g~~~~a~~~~dG~F~f~nVP~G 158 (278)
-++..+++++.||+ +.| .-.+++..+++..+|.--+.++++.
T Consensus 6 ~~l~~~dG~~lPfG--------a~V~~~~~g~~~giVg~~G~vyl~g~~~~ 48 (89)
T 2xet_A 6 LHLKRSDNKPVPFG--------SIVTIEGQSSSSGIVGDNSGVYLTGLPKK 48 (89)
T ss_dssp EEEEETTSCBCCTT--------CEEEETTCCSCCEECCTTSEEEEEEECSE
T ss_pred EEEEcCCCCcCCCc--------cEEEECCCCCEEEEEcCCCEEEEECCCCC
Confidence 34566777765554 455 4334556899999999999999874
No 92
>3ncx_A Intimin, intimin adherence protein; intimin TIR, cell adhesion; 2.60A {Escherichia coli O157} PDB: 2zqk_A 3ncw_A 2zwk_A
Probab=27.51 E-value=64 Score=28.05 Aligned_cols=70 Identities=16% Similarity=0.237 Sum_probs=50.5
Q ss_pred CceEEEEEEECCCCCCCCCCCCCCCceeEEEEEc--Cc--ee--------EEEecCCccEEEccCCCeeEEEEEEecCcc
Q 023727 103 DGFSISGRVKLPGMSLKAFGSPGGKASNVKVVLN--GG--EH--------VTFLRPDGYFSFQNMSAGTHLIEVAAIGYF 170 (278)
Q Consensus 103 ~~~tIsGrV~~p~~~p~~~~lp~~~~s~t~V~L~--g~--~~--------~a~~~~dG~F~f~nVP~GsY~LeVss~gy~ 170 (278)
...+|.++|.+-+.+.++ .||..|+.+..+.|. |+ .| .|-+|.+|.-++.+ .|+-++.+.+.|=.
T Consensus 9 ~~l~id~~v~iig~~v~g-~lP~~wlqygqFkL~a~Ggn~~ytW~Ssdp~IAsVDssG~VT~~~--kGtatITats~dg~ 85 (189)
T 3ncx_A 9 DELKIDNKVDIIGNNVRG-ELPNIWLQYGQFKLKASGGDGTYSWYSENTSIATVDASGKVTLNG--KGSVVIKATSGDKQ 85 (189)
T ss_dssp CCCEECSSEEETTTTEEE-SCCSSEETTCEEECCEESTTSCEEEEESCTTTEEECTTSEEEECS--SSCEEEEEEETTSC
T ss_pred eeEeeCCceEEEecccCC-CCCchhhhceEEEEEecCCCcceEEEeCCCCeEEEcCCCcEEEec--cCcEEEEEEcCCCC
Confidence 346788888888765432 688899999988885 43 22 46788899988876 59999998887654
Q ss_pred eeeEE
Q 023727 171 FSPVR 175 (278)
Q Consensus 171 F~p~R 175 (278)
...+.
T Consensus 86 tatyt 90 (189)
T 3ncx_A 86 TVSYT 90 (189)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 43333
No 93
>2k7p_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=27.50 E-value=2e+02 Score=23.73 Aligned_cols=49 Identities=22% Similarity=0.226 Sum_probs=29.8
Q ss_pred EEEEEcCc---eeEEEecCCccEEEccCC--CeeEEEEEEecCcce--eeEEEEEE
Q 023727 131 VKVVLNGG---EHVTFLRPDGYFSFQNMS--AGTHLIEVAAIGYFF--SPVRVDVS 179 (278)
Q Consensus 131 t~V~L~g~---~~~a~~~~dG~F~f~nVP--~GsY~LeVss~gy~F--~p~RVdV~ 179 (278)
.+|.+.+. .....-+.||+|.+.=.| +|.|.|+|...+-.- .|+.|.|.
T Consensus 130 l~v~I~gp~~~~~~~~d~~dGty~v~Y~p~~~G~y~i~V~~~g~~I~gSPF~v~V~ 185 (188)
T 2k7p_A 130 LSLAIEGPSKAEISCTDNQDGTCSVSYLPVLPGDYSILVKYNEQHVPGSPFTARVT 185 (188)
T ss_dssp EEEEEECSSCCEEEEEECTTSEEEEEEECCSSEEEEEEEEETTEECTTCSEEEEEE
T ss_pred eEEEEeCCCCCeEEEEECCCCEEEEEEEeCCCEEEEEEEEECCEECCCCCEEEEEe
Confidence 44555432 223445678887777665 488888888777322 35666664
No 94
>2x9z_A RRGB, cell WALL surface anchor family protein; cell adhesion; 1.30A {Streptococcus pneumoniae}
Probab=26.85 E-value=33 Score=30.41 Aligned_cols=29 Identities=7% Similarity=0.023 Sum_probs=23.1
Q ss_pred ecCCccEEEccC-CCeeEEEE-EEecCccee
Q 023727 144 LRPDGYFSFQNM-SAGTHLIE-VAAIGYFFS 172 (278)
Q Consensus 144 ~~~dG~F~f~nV-P~GsY~Le-Vss~gy~F~ 172 (278)
++.+|.|.|.++ .+|.|.|. ....||...
T Consensus 198 t~~~g~~~~~gLd~~g~Y~l~Et~a~GY~~~ 228 (262)
T 2x9z_A 198 TTDKNTVTVNGLDKNTEYKFVERSIKGYSAD 228 (262)
T ss_dssp CTTCSEEEECSCCTTSCEEEEECCBTTBEEE
T ss_pred cCCceEEEEeCCCCCCCEEEEEEEeCCcccc
Confidence 589999999999 79988865 344788754
No 95
>2ww8_A RRGA, cell WALL surface anchor family protein; IGG, pilus, CNA_B, adhesin, integrin, cell adhesion; HET: EPE; 1.90A {Streptococcus pneumoniae}
Probab=26.30 E-value=29 Score=36.49 Aligned_cols=39 Identities=26% Similarity=0.347 Sum_probs=30.1
Q ss_pred EEecCCccEEEccCCCeeEEE-EEEec-Ccceee----EEEEEEc
Q 023727 142 TFLRPDGYFSFQNMSAGTHLI-EVAAI-GYFFSP----VRVDVSA 180 (278)
Q Consensus 142 a~~~~dG~F~f~nVP~GsY~L-eVss~-gy~F~p----~RVdV~~ 180 (278)
..++.||.|.|.++++|.|.| |+..+ ||.... +.+.|..
T Consensus 781 ~~Td~~G~~~~~gL~~G~Y~L~EtkAP~GY~l~~~~~~i~ftI~~ 825 (893)
T 2ww8_A 781 VRTGEDGKLTFKNLSDGKYRLFENSEPAGYKPVQNKPIVAFQIVN 825 (893)
T ss_dssp EECCTTCEEEEEEECSEEEEEEEEECCTTBCCCEEEEEEEEEEET
T ss_pred EEECCCCcEEEecccCceEEEEEEeCCCCcCcCCCCccEEEEEec
Confidence 346899999999999998766 66665 787763 5677764
No 96
>3hr6_A SPAA, putative surface-anchored fimbrial subunit; multiple IG-like domains, cell WALL, peptidoglycan-anchor, structural protein; 1.60A {Corynebacterium diphtheriae} PDB: 3htl_X*
Probab=25.71 E-value=48 Score=31.81 Aligned_cols=38 Identities=18% Similarity=0.164 Sum_probs=29.2
Q ss_pred EEEecCCccEEEccCCCeeEEEEEEec---Ccc-eeeEEEEE
Q 023727 141 VTFLRPDGYFSFQNMSAGTHLIEVAAI---GYF-FSPVRVDV 178 (278)
Q Consensus 141 ~a~~~~dG~F~f~nVP~GsY~LeVss~---gy~-F~p~RVdV 178 (278)
...+|.+|.-.|.+++.|.|++.-... +|. ..|+-|.|
T Consensus 80 ~~~Td~~G~~~f~~L~~G~YLV~et~~~~~~~~~a~Pflv~l 121 (436)
T 3hr6_A 80 ATKKTEGGVAKFDNLTPALYLVVQELNGAEAVVRSQPFLVAA 121 (436)
T ss_dssp EEEECBTTBEEEEEECSEEEEEEECSCSSSCEECCCCEEEEE
T ss_pred eEEECCCceEEECCCCCEEEEEEEecCCCCCeeccCCEEEEE
Confidence 568899999999999999999877643 443 33666666
No 97
>1qfh_A Protein (gelation factor); actin binding protein, immunoglobulin, ABP- 120; 2.20A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10
Probab=25.41 E-value=87 Score=26.19 Aligned_cols=37 Identities=19% Similarity=0.231 Sum_probs=29.2
Q ss_pred ecCCccEEEccCC--CeeEEEEEEecCcce--eeEEEEEEc
Q 023727 144 LRPDGYFSFQNMS--AGTHLIEVAAIGYFF--SPVRVDVSA 180 (278)
Q Consensus 144 ~~~dG~F~f~nVP--~GsY~LeVss~gy~F--~p~RVdV~~ 180 (278)
-+.||+|.+.=.| +|.|.|.|..-+-.. .|++|.|..
T Consensus 64 d~~dGty~v~y~p~~~G~~~i~V~~~g~~i~gSPf~v~v~~ 104 (212)
T 1qfh_A 64 DNNDGTYGVVYDAPVEGNYNVNVTLRGNPIKNMPIDVKCIE 104 (212)
T ss_dssp ECSSSEEEEEECCCSSEEEEEEEEETTEECBTCSEEEEEEC
T ss_pred ECCCcEEEEEEECcCcEEEEEEEEECCEecCCCcceEEEcc
Confidence 4568999998877 499999999888654 467888864
No 98
>1nrv_A Growth factor receptor-bound protein 10; dimer, signaling protein; 1.65A {Homo sapiens} SCOP: d.93.1.1 PDB: 3m7f_A
Probab=24.72 E-value=95 Score=22.97 Aligned_cols=32 Identities=9% Similarity=0.181 Sum_probs=22.2
Q ss_pred CCccEEEccCC--CeeEEEEEEecCcceeeEEEEE
Q 023727 146 PDGYFSFQNMS--AGTHLIEVAAIGYFFSPVRVDV 178 (278)
Q Consensus 146 ~dG~F~f~nVP--~GsY~LeVss~gy~F~p~RVdV 178 (278)
++|+|-++.=. +|.|+|.|...+ ...-++|.-
T Consensus 27 ~~G~FLVR~S~~~~g~~~LSv~~~~-~v~H~~I~~ 60 (105)
T 1nrv_A 27 VDGLFLLRDSQSNPKAFVLTLCHHQ-KIKNFQILP 60 (105)
T ss_dssp CTTEEEEEECSSCTTCEEEEEEETT-EEEEEEEEE
T ss_pred CCceEEEEeCCCCCCCEEEEEEeCC-EEEEEEEEE
Confidence 68999998764 699999988754 333444443
No 99
>2k6l_A Putative uncharacterized protein; xanthonomas axonopodis, RHH, structural proteomics, plasmid, hypothetical DNA binding protein; NMR {Xanthomonas axonopodis PV}
Probab=23.48 E-value=23 Score=24.78 Aligned_cols=25 Identities=40% Similarity=0.468 Sum_probs=21.8
Q ss_pred CCCCCCCCCccchhhhhhhhhhhhc
Q 023727 16 NQGGTSDGDVSKKSELAHRSVLHNL 40 (278)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~ 40 (278)
.|||..-||.||--|-|-|+-|+.+
T Consensus 24 ~~~G~rKGdlSkfVEeAvr~~lf~~ 48 (51)
T 2k6l_A 24 AQGGGRKGDLSRFIEDAVRAYLFER 48 (51)
T ss_dssp HHCSCCSSCHHHHHHHHHHHHHHHH
T ss_pred HhcCCccccHHHHHHHHHHHHHHHH
Confidence 4799999999999999999887654
No 100
>2ptt_B Natural killer cell receptor 2B4; CD244, CD48, NK cell receptor, X-RAY, immune system; 1.63A {Mus musculus} PDB: 2ptu_A 1z2k_A
Probab=22.80 E-value=1.7e+02 Score=23.45 Aligned_cols=28 Identities=25% Similarity=0.292 Sum_probs=23.8
Q ss_pred EEEecCCccEEEccCCC---eeEEEEEEecC
Q 023727 141 VTFLRPDGYFSFQNMSA---GTHLIEVAAIG 168 (278)
Q Consensus 141 ~a~~~~dG~F~f~nVP~---GsY~LeVss~g 168 (278)
..|..+||.-.|++|.. |.|.|+|....
T Consensus 68 ~~fd~~n~AL~I~~vQ~eDSg~Y~LeVt~~t 98 (112)
T 2ptt_B 68 YGFDYGDFALSIKSAKLQDSGHYLLEITNTG 98 (112)
T ss_dssp EEECTTTCCEEESSCCGGGCEEEEEEEECTT
T ss_pred EEEecCCcEEEEEecCcccCceEEEEEecCC
Confidence 57778899999999985 99999997655
No 101
>2edo_A CD48 antigen; beta-sandwich, IG-fold, B-lymphocyte activation marker blast-1, BCM1 surface antigen, leukocyte antigen MEM-102, TCT.1; NMR {Homo sapiens}
Probab=22.61 E-value=1e+02 Score=22.99 Aligned_cols=38 Identities=11% Similarity=0.050 Sum_probs=27.1
Q ss_pred EecCCccEEEccCCC---eeEEEEEEecCc--ceeeEEEEEEc
Q 023727 143 FLRPDGYFSFQNMSA---GTHLIEVAAIGY--FFSPVRVDVSA 180 (278)
Q Consensus 143 ~~~~dG~F~f~nVP~---GsY~LeVss~gy--~F~p~RVdV~~ 180 (278)
+...+|+-.|.||.. |.|.+++...+- ....+++.|..
T Consensus 68 l~~~~~sL~I~nv~~~DsG~Y~c~v~~~~~~~~~~~~~L~V~~ 110 (121)
T 2edo_A 68 LDPQSGALYISKVQKEDNSTYIMRVLKKTGNEQEWKIKLQVLD 110 (121)
T ss_dssp ECTTTCCEEESSCCGGGCSEEEEEEEETTTEEEECCEECEEEC
T ss_pred EeCCCceEEEeCCCHHHCeEEEEEEEcCCCcEEEEEEEEEEEC
Confidence 334789999999985 999999986542 33445555543
No 102
>1d4t_A T cell signal transduction molecule SAP; SH2 domain, tyrosine kinase, signal transduction, peptide recognition, signaling protein; 1.10A {Homo sapiens} SCOP: d.93.1.1 PDB: 1d1z_A 1d4w_A* 1m27_A*
Probab=22.34 E-value=1.1e+02 Score=22.60 Aligned_cols=32 Identities=22% Similarity=0.325 Sum_probs=23.1
Q ss_pred CCccEEEccC--CCeeEEEEEEecCcceeeEEEEE
Q 023727 146 PDGYFSFQNM--SAGTHLIEVAAIGYFFSPVRVDV 178 (278)
Q Consensus 146 ~dG~F~f~nV--P~GsY~LeVss~gy~F~p~RVdV 178 (278)
+||+|-+++= .+|.|+|.|...+ ...-++|.-
T Consensus 25 ~~G~FLVR~S~~~~g~~~LSv~~~~-~v~H~~I~~ 58 (104)
T 1d4t_A 25 LDGSYLLRDSESVPGVYCLCVLYHG-YIYTYRVSQ 58 (104)
T ss_dssp CTTEEEEEECSSSTTCEEEEEEETT-EEEEEEEEE
T ss_pred CCCEEEEeeCCCCCCCEEEEEEECC-eEEEEEEEE
Confidence 7899999986 4699999998754 334455543
No 103
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=21.96 E-value=1.3e+02 Score=23.63 Aligned_cols=36 Identities=14% Similarity=0.148 Sum_probs=28.7
Q ss_pred cCCccEEEccCCC---eeEEEEEEecCcceeeEEEEEEc
Q 023727 145 RPDGYFSFQNMSA---GTHLIEVAAIGYFFSPVRVDVSA 180 (278)
Q Consensus 145 ~~dG~F~f~nVP~---GsY~LeVss~gy~F~p~RVdV~~ 180 (278)
..+|+..|.||.. |.|..++...+.....+.+.|..
T Consensus 66 ~~~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~L~V~~ 104 (180)
T 2dru_A 66 KTNGALRIYNVSKEDRGDYYMRMLHETEDQWKITMEVYE 104 (180)
T ss_dssp TTTCCEEECSCCGGGCEEEEEEEESSSEEEEEEEEEEEC
T ss_pred CCCccEEEcCCCHHHCeEEEEEEEcCCeEEEEEEEEEEC
Confidence 5789999999985 99999998877445566777764
No 104
>4dzg_A PLIG; lysozyme inhibitor, G-type lysozyme binding, hydrolase inhib; HET: MLY; 2.02A {Aeromonas hydrophila subsp}
Probab=21.92 E-value=87 Score=24.42 Aligned_cols=63 Identities=13% Similarity=0.207 Sum_probs=31.5
Q ss_pred CceEEEEEEECCCCCCCCCCCCCCCceeEEEEEc--CceeEEEecCCccEE-------------Ec-cCC-CeeEEEEEE
Q 023727 103 DGFSISGRVKLPGMSLKAFGSPGGKASNVKVVLN--GGEHVTFLRPDGYFS-------------FQ-NMS-AGTHLIEVA 165 (278)
Q Consensus 103 ~~~tIsGrV~~p~~~p~~~~lp~~~~s~t~V~L~--g~~~~a~~~~dG~F~-------------f~-nVP-~GsY~LeVs 165 (278)
...+|+|+|.-.+.. .+.+.+..=...+|.|+ ...+..+..++|... +. -+| .|.|+++|.
T Consensus 16 ~~~~v~G~I~g~~~~--~Y~~~a~aGQ~l~V~ls~~~~~~f~I~~P~~~~~~~l~~g~~~~~~~~~g~LP~sG~Y~i~V~ 93 (114)
T 4dzg_A 16 HSAQLXGSFTGYDTI--HYTLVAXAGQTMTVXIGGSSNANFNVFAPGAQPGQAEAIGRNDGDGQWQGALPASGXYLIQVY 93 (114)
T ss_dssp SEEEC-CCCBTTCCE--EEECCC-CCCEEEC-CEESTTCEEEEECTTCCTTTSCCSEECCTTSCCEEECSSCC-CEEEEE
T ss_pred CceEEeEEecCCCce--EEEEEecCCCEEEEEeCCCCcEEEEEECCCCCcccceeccccCCcceEEEEecCCCcEEEEEE
Confidence 456788888755542 23333333345566664 234556666666431 11 134 378888877
Q ss_pred ec
Q 023727 166 AI 167 (278)
Q Consensus 166 s~ 167 (278)
..
T Consensus 94 ~~ 95 (114)
T 4dzg_A 94 QM 95 (114)
T ss_dssp CC
T ss_pred ec
Confidence 65
No 105
>3iwv_A 5-hydroxyisourate hydrolase; transthyretin, molecular evolution, URIC acid degradation, T hormones, peroxisome, purine metabolism; 1.68A {Danio rerio} PDB: 3iwu_A 3q1e_A 2h6u_A 2h1x_A
Probab=21.64 E-value=1.5e+02 Score=24.32 Aligned_cols=43 Identities=21% Similarity=0.350 Sum_probs=30.1
Q ss_pred ceeEEEEEc---C--ce----eEEEecCCccEE--E--ccCCCeeEEEEEEecCcc
Q 023727 128 ASNVKVVLN---G--GE----HVTFLRPDGYFS--F--QNMSAGTHLIEVAAIGYF 170 (278)
Q Consensus 128 ~s~t~V~L~---g--~~----~~a~~~~dG~F~--f--~nVP~GsY~LeVss~gy~ 170 (278)
++.+.|.|. + ++ ..+.+|.||... + ..+++|.|.|+...-+|.
T Consensus 41 Aagv~V~L~~~~~~~~~w~~l~~~~Tn~DGR~~~ll~~~~~~~G~Y~L~F~tg~Yf 96 (138)
T 3iwv_A 41 GANMTIVLHRLDPVSSAWNILTTGITNDDGRCPGLITKENFIAGVYKMRFETGKYW 96 (138)
T ss_dssp CTTCEEEEEEECSSSCCEEEEEEEECCTTSCCTTSSCTTTCCSEEEEEEECHHHHH
T ss_pred CCCCEEEEEEECCCCCCcEEEEEEecCCCCCcCCccCcccCCCceEEEEEehHHHH
Confidence 566777773 2 11 247899999864 1 246789999999988874
No 106
>2aug_A Growth factor receptor-bound protein 14; phosphorylation, SH2 domain, signaling protein; 2.30A {Homo sapiens}
Probab=21.37 E-value=1.2e+02 Score=23.63 Aligned_cols=32 Identities=13% Similarity=0.153 Sum_probs=23.3
Q ss_pred CCccEEEccCC--CeeEEEEEEecCcceeeEEEEE
Q 023727 146 PDGYFSFQNMS--AGTHLIEVAAIGYFFSPVRVDV 178 (278)
Q Consensus 146 ~dG~F~f~nVP--~GsY~LeVss~gy~F~p~RVdV 178 (278)
+||+|-+++=. +|.|+|.|...+ ...-++|.-
T Consensus 48 ~~G~FLVR~S~~~~g~y~LSv~~~~-~v~H~~I~~ 81 (126)
T 2aug_A 48 VDGVFLVRDSQSNPKTFVLSMSHGQ-KIKHFQIIP 81 (126)
T ss_dssp CTTEEEEEECSSSSCCEEEEEEETT-EEEEEEEEE
T ss_pred CCCEEEEeecCCCCCCEEEEEEcCC-eEEEEEEEE
Confidence 58999999864 699999998754 344455554
No 107
>2lnw_A VAV-2, guanine nucleotide exchange factor VAV2; signaling protein; HET: PTR; NMR {Homo sapiens} PDB: 2lnx_A
Probab=21.15 E-value=1.4e+02 Score=23.10 Aligned_cols=32 Identities=13% Similarity=0.155 Sum_probs=22.4
Q ss_pred cCCccEEEccCC--CeeEEEEEEecCcceeeEEEE
Q 023727 145 RPDGYFSFQNMS--AGTHLIEVAAIGYFFSPVRVD 177 (278)
Q Consensus 145 ~~dG~F~f~nVP--~GsY~LeVss~gy~F~p~RVd 177 (278)
.++|+|-++.=. +|.|+|.|...+ ...-++|.
T Consensus 41 ~~~G~FLVR~S~~~~g~y~LSv~~~~-~v~H~~I~ 74 (122)
T 2lnw_A 41 HASGTYLIRERPAEAERFAISIKFND-EVKHIKVV 74 (122)
T ss_dssp SCTTBEEEEECCCSSEEEEEEEECSS-CEEEEEEE
T ss_pred CCCCeEEEEeCCCCCCcEEEEEEeCC-cEEEEEEE
Confidence 369999999865 699999988743 23334443
No 108
>1rja_A Tyrosine-protein kinase 6; human protein tyrosine kinase-6 (PTK6/BRK), SRC homology 2(S domain, solution structure, backbone dynamics, transferase; NMR {Homo sapiens} SCOP: d.93.1.1
Probab=21.00 E-value=97 Score=22.77 Aligned_cols=33 Identities=9% Similarity=0.084 Sum_probs=22.8
Q ss_pred cCCccEEEccCC--CeeEEEEEEecCcceeeEEEEE
Q 023727 145 RPDGYFSFQNMS--AGTHLIEVAAIGYFFSPVRVDV 178 (278)
Q Consensus 145 ~~dG~F~f~nVP--~GsY~LeVss~gy~F~p~RVdV 178 (278)
.++|+|-++.=. +|.|+|.|...+ ....++|.-
T Consensus 23 ~~~G~FLVR~S~~~~g~~~LSv~~~~-~v~H~~I~~ 57 (100)
T 1rja_A 23 NATGAFLIRVSEKPSADYVLSVRDTQ-AVRHYKIWR 57 (100)
T ss_dssp CSSCCEEEEECSSSSSCEEEEECTTS-SCEEEEEEE
T ss_pred CCCCEEEEEeCCCCCCCEEEEEEECC-EEEEEEEEE
Confidence 469999998764 589999987643 344455544
No 109
>1ib8_A Conserved protein SP14.3; nucleic acid binding protein, ribosomal protein, essential gene, structural genomics; NMR {Streptococcus pneumoniae} SCOP: b.38.2.1 d.52.4.1
Probab=20.94 E-value=39 Score=28.16 Aligned_cols=14 Identities=14% Similarity=0.254 Sum_probs=12.3
Q ss_pred CeeEEEEEEecCcc
Q 023727 157 AGTHLIEVAAIGYF 170 (278)
Q Consensus 157 ~GsY~LeVss~gy~ 170 (278)
++.|.|||+|+|..
T Consensus 77 ~~~Y~LEVSSPGld 90 (164)
T 1ib8_A 77 PEQYFLEITSPGLE 90 (164)
T ss_dssp CSCEEEEEECCSSS
T ss_pred CCCeEEEEeCCCCC
Confidence 58999999999964
No 110
>2dmc_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=20.79 E-value=99 Score=23.99 Aligned_cols=37 Identities=24% Similarity=0.433 Sum_probs=28.2
Q ss_pred cCCccEEEccCC--CeeEEEEEEecCcce--eeEEEEEEcC
Q 023727 145 RPDGYFSFQNMS--AGTHLIEVAAIGYFF--SPVRVDVSAR 181 (278)
Q Consensus 145 ~~dG~F~f~nVP--~GsY~LeVss~gy~F--~p~RVdV~~~ 181 (278)
..||+|.+.=+| +|.|+|.|...|-.- .|++|.|...
T Consensus 66 ~~~g~y~v~ftP~e~G~h~v~V~~~g~~I~GSPF~v~V~~~ 106 (116)
T 2dmc_A 66 LPNNHIGISFIPREVGEHLVSIKKNGNHVANSPVSIMVVQS 106 (116)
T ss_dssp ETTTEEEEEECCCSCEEEEEECBBSSSBCTTCSEEEEECCS
T ss_pred CCCCeEEEEEEeCCCeeEEEEEEECCEECCCCCeEEEEecC
Confidence 357888888777 499999999888543 4788888654
No 111
>2blf_A SORA, sulfite\:cytochrome C oxidoreductase subunit A; sulfite oxidase, molybdopterin, C-type cytochrome, heme, electron transport; HET: MSS HEC; 1.8A {Starkeya novella} PDB: 2bpb_A* 2c9x_A* 2ca3_A* 2ca4_A*
Probab=20.69 E-value=1.4e+02 Score=28.05 Aligned_cols=29 Identities=21% Similarity=0.220 Sum_probs=21.8
Q ss_pred ceEEEEEEECCCCCCCCCCCCCCCceeEEEEEcCceeEE
Q 023727 104 GFSISGRVKLPGMSLKAFGSPGGKASNVKVVLNGGEHVT 142 (278)
Q Consensus 104 ~~tIsGrV~~p~~~p~~~~lp~~~~s~t~V~L~g~~~~a 142 (278)
.++|+|..- .++. .+..+.|++|||..|.
T Consensus 280 ~~~v~G~A~-~Gg~---------~I~rVEVS~DgG~tW~ 308 (373)
T 2blf_A 280 EVPLRGIAF-DGGY---------GITQVSVSADAGKSWT 308 (373)
T ss_dssp EEEEEEEEE-CSSS---------CEEEEEEESSTTSSCE
T ss_pred eEEEEEEEE-cCCC---------CEEEEEEEeCCCCCce
Confidence 689999887 4432 2788999999986654
No 112
>2gtq_A Aminopeptidase N; alanine aminopeptidase, M1 family peptidas PSI-2, structural genomics, protein structure initiative; 2.05A {Neisseria meningitidis}
Probab=20.51 E-value=1e+02 Score=32.07 Aligned_cols=63 Identities=11% Similarity=0.186 Sum_probs=36.6
Q ss_pred CCceEEEEEEECCCCC-CCCCCCCCCCceeEEEEEcCceeEEEecCCccEEEccCCCeeEEEEEEe
Q 023727 102 GDGFSISGRVKLPGMS-LKAFGSPGGKASNVKVVLNGGEHVTFLRPDGYFSFQNMSAGTHLIEVAA 166 (278)
Q Consensus 102 ~~~~tIsGrV~~p~~~-p~~~~lp~~~~s~t~V~L~g~~~~a~~~~dG~F~f~nVP~GsY~LeVss 166 (278)
....+++|++.+.-.. ...+.|.... .-.+|.++|.. ..+...++..+|..+|+|.|+|+|..
T Consensus 29 ~~~~~v~g~~~i~~~~~~~~i~Ld~~~-~I~sv~v~g~~-~~~~~~~~~L~I~~lp~g~~~l~I~y 92 (867)
T 2gtq_A 29 EPQTVVKSRLTVEPQRVGEPLVLDGSA-KLLSVKINGAA-ADYVLEGETLTIAGVPSERFTVEVET 92 (867)
T ss_dssp SSCEEEEEEEEEEESSTTSCEEEECCS-EEEEEEETTEE-CCCEEETTEEEESCCCSSCEEEEEEE
T ss_pred CCcEEEEEEEEEEEeCCCCEEEEecCC-CEEEEEECCee-cceEeeCCEEEEEecCCCcEEEEEEE
Confidence 3456788888764211 1222332222 23457777644 33444467788877888999998864
No 113
>3k2m_A Proto-oncogene tyrosine-protein kinase ABL1; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_A 3t04_A 1ab2_A
Probab=20.46 E-value=1.3e+02 Score=22.51 Aligned_cols=32 Identities=22% Similarity=0.291 Sum_probs=23.0
Q ss_pred CCccEEEccC--CCeeEEEEEEecCcceeeEEEEE
Q 023727 146 PDGYFSFQNM--SAGTHLIEVAAIGYFFSPVRVDV 178 (278)
Q Consensus 146 ~dG~F~f~nV--P~GsY~LeVss~gy~F~p~RVdV 178 (278)
+||+|-+++= .+|.|+|.|...+ ....++|.-
T Consensus 25 ~~G~FLVR~S~~~~g~y~LSv~~~~-~v~H~~I~~ 58 (112)
T 3k2m_A 25 INGSFLVRESESSPGQRSISLRYEG-RVYHYRINT 58 (112)
T ss_dssp CTTEEEEEECSSSTTCEEEEEEETT-EEEEEEEEE
T ss_pred CCceEEEEeCCCCCCCEEEEEEeCC-cEEEEEEEE
Confidence 5999999886 4699999998754 344455543
No 114
>2iug_A Phosphatidylinositol 3-kinase regulatory alpha subunit; transferase, polymorphism, UBL conjugation, phosphorylation, SH2, PI3K, SH2 domain; 1.89A {Homo sapiens} PDB: 2iuh_A* 2iui_A* 1fu5_A* 1fu6_A 1oo3_A 1oo4_A* 2pna_A 2pnb_A
Probab=20.41 E-value=1.2e+02 Score=23.18 Aligned_cols=33 Identities=18% Similarity=0.220 Sum_probs=23.1
Q ss_pred cCCccEEEccCC---CeeEEEEEEecCcceeeEEEEE
Q 023727 145 RPDGYFSFQNMS---AGTHLIEVAAIGYFFSPVRVDV 178 (278)
Q Consensus 145 ~~dG~F~f~nVP---~GsY~LeVss~gy~F~p~RVdV 178 (278)
.++|+|-++.=. +|.|+|.|...+ ...-++|.-
T Consensus 30 ~~~G~FLVR~S~~~~~g~y~LSv~~~~-~v~H~~I~~ 65 (120)
T 2iug_A 30 TADGTFLVRDASTKMHGDYTLTLRKGG-NNKLIKIFH 65 (120)
T ss_dssp CCTTEEEEEECSSGGGCSEEEEEEETT-EEEEEEEEE
T ss_pred CCCcEEEEECCCCCCCCcEEEEEEECC-EEEEEEEEE
Confidence 368999998754 689999998755 233455544
No 115
>2w9x_A AXE2A, CJCE2B, putative acetyl xylan esterase; carbohydrate esterase family 2, hydrolase; 2.00A {Cellvibrio japonicus}
Probab=20.41 E-value=34 Score=31.16 Aligned_cols=20 Identities=10% Similarity=0.446 Sum_probs=7.5
Q ss_pred cEEEccCCCeeEEEEEEecC
Q 023727 149 YFSFQNMSAGTHLIEVAAIG 168 (278)
Q Consensus 149 ~F~f~nVP~GsY~LeVss~g 168 (278)
.+.|.++++|.|++++.-+.
T Consensus 96 ~~~~~~l~~~~h~v~l~k~t 115 (366)
T 2w9x_A 96 DYPVESLAPGKHRVRLEKLT 115 (366)
T ss_dssp EEC---------CEEEEECS
T ss_pred EEeccCCCCCcEEEEEEEec
Confidence 35666888888888887763
Done!