BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 023729
         (278 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9P2Y5|UVRAG_HUMAN UV radiation resistance-associated gene protein OS=Homo sapiens
           GN=UVRAG PE=1 SV=1
          Length = 699

 Score = 77.4 bits (189), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 89/194 (45%), Gaps = 48/194 (24%)

Query: 74  QKMLRMRQQFMISQVSFLYPVKILVGPKQEQELESFPSGNRSGNSAASKPVNPGSLTILG 133
           Q  +R RQ  ++S++S++YP+ +       +  + F  G +  NS   +  + GS+    
Sbjct: 313 QLTIRCRQ--LLSELSYIYPIDL------NEHKDYFVCGVKLPNSEDFQAKDDGSI---- 360

Query: 134 LHLTILPFTKMSLFTDKKEVQRSATALGYIAHVVSLIASYLEVPLRYPLRLGGSHTYIND 193
                                  A ALGY AH+VS+I+ +L+VPLRYP+   GS + I D
Sbjct: 361 -----------------------AVALGYTAHLVSMISFFLQVPLRYPIIHKGSRSTIKD 397

Query: 194 YAPSIEPTSDLSSNIALSTNTKPAEFPLFLEGQDATRAAYAVFLLNKDIEQLLNYIGVKS 253
                        NI      K  EFPL+ +G +  +  Y V+LLNK+I QL    G+ +
Sbjct: 398 -------------NINDKLTEKEREFPLYPKGGEKLQFDYGVYLLNKNIAQLRYQHGLGT 444

Query: 254 LGPRHVLANLKELL 267
              R  L NLK  +
Sbjct: 445 PDLRQTLPNLKNFM 458


>sp|O60149|ATG14_SCHPO Autophagy-related protein 14 OS=Schizosaccharomyces pombe (strain
           972 / ATCC 24843) GN=atg14 PE=3 SV=2
          Length = 474

 Score = 53.5 bits (127), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 69/154 (44%), Gaps = 23/154 (14%)

Query: 123 PVNPGSLTILGLHLTILPFTKMSLFTDKKEVQRSATALGYIAHVVSLIASYLEVPLRYPL 182
           P N    TI  L L+  P        DK      A ++G++AH++  ++ YLE  L YP+
Sbjct: 334 PGNHDEFTIRNLRLSFEP--------DKINNVEMAASIGFLAHLLQTLSKYLEKELAYPI 385

Query: 183 RLGGSHTYINDYAPSIEPTSDLSSNIALSTNTKPAEFPLFLEGQDATRAAYAVFLLNKDI 242
               S + I D       T D+ + I          FPL+   +      +A++LLN+D+
Sbjct: 386 LCASSRSSILDTL-----TPDIPTRI----------FPLYPATRPIELFEHAIYLLNQDV 430

Query: 243 EQLLNYIGVKSLGPRHVLANLKELLRTIQSPEYI 276
              L   G+       +L N K+LL+ I S +++
Sbjct: 431 NDFLETFGLPIDQSMDILRNFKKLLQFILSGQHL 464


>sp|Q9VK07|UVRAG_DROME UV radiation resistance-associated gene protein OS=Drosophila
           melanogaster GN=Uvrag PE=1 SV=1
          Length = 696

 Score = 42.4 bits (98), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 18/116 (15%)

Query: 157 ATALGYIAHVVSLIASYLEVPLRYPLRLGGSHTYINDYAPSIEPTSDLSSNIALSTNTKP 216
           + ALGY+AH+V ++A  ++ PLR  +           Y PS     D    +  +T    
Sbjct: 475 SAALGYVAHLVQMLAIIMDRPLRNRIL----------YEPSKARIVDDIKELTYTTR--- 521

Query: 217 AEFPLFLEG-QDATRAAYAVFLLNKDIEQL-LNYIGVKSLGPRHVLANLKELLRTI 270
            EFPL+      + +  YA++LL +++ QL  +  G   L  R+   NL EL  T+
Sbjct: 522 -EFPLYTRSILPSQQTKYAIYLLRQNVSQLCFDITGQCDL--RNTFGNLLELFSTL 574


>sp|Q9SCV9|BGAL3_ARATH Beta-galactosidase 3 OS=Arabidopsis thaliana GN=BGAL3 PE=1 SV=1
          Length = 856

 Score = 33.1 bits (74), Expect = 2.1,   Method: Composition-based stats.
 Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 12/98 (12%)

Query: 67  YGHLQKLQKMLRMRQQFMISQVSFLYPVKILVGPKQEQELESFPSG-------NRSGNSA 119
           YGHL++L + ++M ++ ++S      PV   +G KQ+  + S  SG       N    SA
Sbjct: 335 YGHLKELHRAIKMCEKALVSA----DPVVTSIGNKQQAHVYSAESGDCSAFLANYDTESA 390

Query: 120 ASKPVNPGSLTILGLHLTILPFTKMSLF-TDKKEVQRS 156
           A    N     +    ++ILP  + ++F T K  VQ S
Sbjct: 391 ARVLFNNVHYNLPPWSISILPDCRNAVFNTAKVGVQTS 428


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.316    0.132    0.359 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,738,520
Number of Sequences: 539616
Number of extensions: 3682812
Number of successful extensions: 12044
Number of sequences better than 100.0: 25
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 12012
Number of HSP's gapped (non-prelim): 51
length of query: 278
length of database: 191,569,459
effective HSP length: 116
effective length of query: 162
effective length of database: 128,974,003
effective search space: 20893788486
effective search space used: 20893788486
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)