Query 023729
Match_columns 278
No_of_seqs 161 out of 244
Neff 6.1
Searched_HMMs 13730
Date Mon Mar 25 11:48:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023729.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/023729hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1cxzb_ a.2.6.1 (B:) Protein k 76.6 3.5 0.00025 29.2 6.4 29 2-30 20-48 (86)
2 d1quua1 a.7.1.1 (A:1-124) alph 28.7 82 0.006 21.4 9.2 22 12-33 50-71 (124)
3 d1s35a2 a.7.1.1 (A:1169-1273) 27.5 60 0.0044 21.6 5.7 17 14-30 37-53 (105)
4 d1qsda_ a.7.5.1 (A:) Tubulin c 19.8 1.4E+02 0.01 20.9 7.0 52 4-55 23-74 (102)
5 d1fxkc_ a.2.5.1 (C:) Prefoldin 19.5 1.3E+02 0.0097 21.0 6.5 25 10-34 95-119 (133)
6 d1t3ua_ d.244.1.1 (A:) ZapA ho 16.9 48 0.0035 22.2 3.1 36 215-250 7-42 (92)
7 d1urfa_ a.2.6.1 (A:) Protein k 14.7 1.7E+02 0.012 19.5 9.1 49 10-62 8-60 (81)
8 d2efla1 a.238.1.4 (A:1-288) Fo 14.0 2.5E+02 0.018 21.2 12.4 13 38-50 132-144 (288)
9 d1qada_ d.93.1.1 (A:) Phosphat 12.7 42 0.0031 23.1 1.8 10 174-183 97-106 (107)
10 d2f2ab1 a.182.1.2 (B:294-400) 10.2 1.9E+02 0.014 19.6 4.9 43 232-274 45-87 (107)
No 1
>d1cxzb_ a.2.6.1 (B:) Protein kinase c-like 1, pkn/prk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=76.65 E-value=3.5 Score=29.17 Aligned_cols=29 Identities=24% Similarity=0.243 Sum_probs=13.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 023729 2 RERLEARRLLMEKMSMRSKVEKEDAKNQE 30 (278)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~~~i~~~r 30 (278)
++++|.+++.+.+-...-=++++..++.+
T Consensus 20 q~~le~~r~~lr~eI~KELKIKeGAENL~ 48 (86)
T d1cxzb_ 20 QQQLELERERLRREIRKELKLKEGAENLR 48 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHhHHHHH
Confidence 45556555555544444334444444443
No 2
>d1quua1 a.7.1.1 (A:1-124) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.72 E-value=82 Score=21.44 Aligned_cols=22 Identities=9% Similarity=0.256 Sum_probs=11.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 023729 12 MEKMSMRSKVEKEDAKNQEERL 33 (278)
Q Consensus 12 ~~~~~~~~~~l~~~i~~~re~l 33 (278)
++.+..+-+.+..++...++++
T Consensus 50 v~~l~~~h~~~~~~i~~~~~~v 71 (124)
T d1quua1 50 VRALLRKHEAFESDLAAHQDRV 71 (124)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhHHHH
Confidence 4444455555556665555433
No 3
>d1s35a2 a.7.1.1 (A:1169-1273) Spectrin beta chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.50 E-value=60 Score=21.55 Aligned_cols=17 Identities=6% Similarity=-0.195 Sum_probs=7.3
Q ss_pred HHHHHHHHHHHHHHHHH
Q 023729 14 KMSMRSKVEKEDAKNQE 30 (278)
Q Consensus 14 ~~~~~~~~l~~~i~~~r 30 (278)
.+..+-+.+..++...+
T Consensus 37 ~l~k~h~~l~~~l~~~~ 53 (105)
T d1s35a2 37 AGIRKFEDFLGSMENNR 53 (105)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhH
Confidence 33333444444444444
No 4
>d1qsda_ a.7.5.1 (A:) Tubulin chaperone cofactor A {Baker's yeast (Saccharomyces cerevisiae), Rbl2p [TaxId: 4932]}
Probab=19.81 E-value=1.4e+02 Score=20.88 Aligned_cols=52 Identities=23% Similarity=0.219 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhHH
Q 023729 4 RLEARRLLMEKMSMRSKVEKEDAKNQEERLSMEVRSLLVAGTALSVARKRLQ 55 (278)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~l~~~i~~~re~l~~~~~~l~~~~~~l~~a~~~l~ 55 (278)
.++....|++.+.+..-.=.-+|++.++=|.....-+-.-.+.|..|-..|+
T Consensus 23 E~~~q~~kv~k~kad~~~dey~iKkq~evL~Es~~mipd~~~RL~~a~~~L~ 74 (102)
T d1qsda_ 23 ELKDQEAHVAKLKEDKSVDPYDLKKQEEVLDDTKRLLPTLYEKIREFKEDLE 74 (102)
T ss_dssp HHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 4445555555554321111234455555555444444444444444444443
No 5
>d1fxkc_ a.2.5.1 (C:) Prefoldin alpha subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=19.49 E-value=1.3e+02 Score=21.01 Aligned_cols=25 Identities=4% Similarity=-0.001 Sum_probs=11.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 023729 10 LLMEKMSMRSKVEKEDAKNQEERLS 34 (278)
Q Consensus 10 ~~~~~~~~~~~~l~~~i~~~re~l~ 34 (278)
.|++.+....+.+.+++++.++++.
T Consensus 95 ~ri~~l~~~~~~l~~~~~~~~~~i~ 119 (133)
T d1fxkc_ 95 SQKNELESTLQKMGENLRAITDIMM 119 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444444444333
No 6
>d1t3ua_ d.244.1.1 (A:) ZapA homologue PA5227 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=16.87 E-value=48 Score=22.18 Aligned_cols=36 Identities=8% Similarity=0.044 Sum_probs=31.2
Q ss_pred CCcccCcccCCCChhhHHHHHHHHHHHHHHHHHhcC
Q 023729 215 KPAEFPLFLEGQDATRAAYAVFLLNKDIEQLLNYIG 250 (278)
Q Consensus 215 ~~~~fPLf~~~~d~~~F~yav~LLnknI~qL~~~~G 250 (278)
..+.||+.|+.++...-..+..+||.-+..+....|
T Consensus 7 ~gr~Y~i~c~~~eee~l~~aA~~ln~k~~~l~~~~~ 42 (92)
T d1t3ua_ 7 LDKEYCINCPDDERANLESAARYLDGKMREIRSSGK 42 (92)
T ss_dssp TTEEEEECCCTTTHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred CCEEEEeeCCccHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 357899999988888899999999999999988655
No 7
>d1urfa_ a.2.6.1 (A:) Protein kinase c-like 1, pkn/prk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=14.68 E-value=1.7e+02 Score=19.53 Aligned_cols=49 Identities=12% Similarity=0.112 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----hhHHHHHHHhHHHHHHHhh
Q 023729 10 LLMEKMSMRSKVEKEDAKNQEERLSMEVRSLLVA----GTALSVARKRLQESNRLLA 62 (278)
Q Consensus 10 ~~~~~~~~~~~~l~~~i~~~re~l~~~~~~l~~~----~~~l~~a~~~l~e~~~~L~ 62 (278)
.|+++|+.+++.-.+ -+|....-++.+... ++.++.|+..+.|.+.-+.
T Consensus 8 ~rl~~L~~~L~iE~k----vkeGaEnm~k~~~~~~~~DrK~l~eaq~~l~eS~~Ki~ 60 (81)
T d1urfa_ 8 SRVAGLEKQLAIELK----VKQGAENMIQTYSNGSTKDRKLLLTAQQMLQDSKTKID 60 (81)
T ss_dssp HHHHHHHHHHHHHHH----HHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH----HHHHHHHHHHHHccCCcccHHHHHHHHHHHHHHHHHHH
Confidence 356666666544332 233333334333322 3556666666666544333
No 8
>d2efla1 a.238.1.4 (A:1-288) Formin-binding protein 1, FNBP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=13.97 E-value=2.5e+02 Score=21.21 Aligned_cols=13 Identities=8% Similarity=0.059 Sum_probs=4.8
Q ss_pred HHHHHhhhHHHHH
Q 023729 38 RSLLVAGTALSVA 50 (278)
Q Consensus 38 ~~l~~~~~~l~~a 50 (278)
..+....+....+
T Consensus 132 ~~l~k~k~~Y~~~ 144 (288)
T d2efla1 132 KQLESSKRRFERD 144 (288)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3333333333333
No 9
>d1qada_ d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-alpha subunit {Cow (Bos taurus) [TaxId: 9913]}
Probab=12.71 E-value=42 Score=23.11 Aligned_cols=10 Identities=50% Similarity=0.906 Sum_probs=6.5
Q ss_pred cCCCCCCccc
Q 023729 174 LEVPLRYPLR 183 (278)
Q Consensus 174 L~v~LpYpi~ 183 (278)
|.++|+|||.
T Consensus 97 l~~~L~~Pv~ 106 (107)
T d1qada_ 97 LNVTLAYPVY 106 (107)
T ss_dssp CCCCCCEETT
T ss_pred CceEcccccc
Confidence 5667777763
No 10
>d2f2ab1 a.182.1.2 (B:294-400) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, GatB, C-terminal domain {Staphylococcus aureus [TaxId: 1280]}
Probab=10.23 E-value=1.9e+02 Score=19.63 Aligned_cols=43 Identities=19% Similarity=0.212 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHccCCC
Q 023729 232 AYAVFLLNKDIEQLLNYIGVKSLGPRHVLANLKELLRTIQSPE 274 (278)
Q Consensus 232 ~yav~LLnknI~qL~~~~Gl~~~~~~~tL~NL~~Ll~~~~s~~ 274 (278)
..+..|+.-++.-+++..|+...+..=+-.+|..|+..+..+.
T Consensus 45 k~~aNwl~~el~~~ln~~~~~i~~~~i~~~~la~Li~lv~~g~ 87 (107)
T d2f2ab1 45 KLTSNWLMGGVNEYLNKNQVELLDTKLTPENLAGMIKLIEDGT 87 (107)
T ss_dssp HHHHHHHHTHHHHHHHTTTCCTTTSSCCHHHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHHHHHHHhcCCccccCCcCHHHHHHHHHHHHcCC
Confidence 3477888999999999999987765556778999999888765
Done!