Your job contains 1 sequence.
>023737
MQTPIGNYFPSSLPVTAISGAIRLKNDALKPSQVSSELSDDDASLNNSREEGLECPICWE
SFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSLRLICKG
NLKFPQKNYYLLWMVESMNGDRSKSNPHFRGDHQPASSLNRNSAVRNQVSHAHNGRATCS
HVSRQSEIRRDEGRFLTGHLNAERLQLSLRKSLVFFAQLTAKFPLIIVLILIILYAIPAS
AAILALYILITIVFAIPSCLVLYFALPILDWLVREIIA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 023737
(278 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2091301 - symbol:AT3G29270 species:3702 "Arabi... 631 1.0e-61 1
TAIR|locus:2007101 - symbol:AT1G69330 species:3702 "Arabi... 566 7.8e-55 1
TAIR|locus:2019080 - symbol:AT1G74370 species:3702 "Arabi... 549 4.9e-53 1
ZFIN|ZDB-GENE-070705-92 - symbol:si:ch211-202f5.2 "si:ch2... 131 1.9e-07 1
UNIPROTKB|C9IZE0 - symbol:TRIM59 "Tripartite motif-contai... 100 6.4e-05 1
UNIPROTKB|C9J9F0 - symbol:TRIM59 "Tripartite motif-contai... 100 6.4e-05 1
WB|WBGene00021763 - symbol:Y51F10.2 species:6239 "Caenorh... 119 6.8e-05 1
UNIPROTKB|Q5JVY0 - symbol:TRIM32 "E3 ubiquitin-protein li... 111 8.3e-05 1
UNIPROTKB|C9JNB9 - symbol:TRIM59 "Tripartite motif-contai... 97 0.00014 1
WB|WBGene00206482 - symbol:B0416.10 species:6239 "Caenorh... 93 0.00038 1
UNIPROTKB|Q6INB3 - symbol:rnf182 "E3 ubiquitin-protein li... 110 0.00047 1
UNIPROTKB|C9IZ30 - symbol:RNF182 "E3 ubiquitin-protein li... 91 0.00063 1
WB|WBGene00020628 - symbol:T20F5.6 species:6239 "Caenorha... 116 0.00066 1
WB|WBGene00022873 - symbol:ZK1240.9 species:6239 "Caenorh... 106 0.00099 1
>TAIR|locus:2091301 [details] [associations]
symbol:AT3G29270 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IDA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 EMBL:BT002808 EMBL:BT004444 EMBL:DQ086861
EMBL:AK229795 IPI:IPI00542230 RefSeq:NP_189573.1 RefSeq:NP_974376.1
UniGene:At.23991 ProteinModelPortal:Q84JZ7 SMR:Q84JZ7 IntAct:Q84JZ7
PaxDb:Q84JZ7 PRIDE:Q84JZ7 EnsemblPlants:AT3G29270.1
EnsemblPlants:AT3G29270.2 GeneID:822584 KEGG:ath:AT3G29270
TAIR:At3g29270 eggNOG:NOG296344 HOGENOM:HOG000239847
InParanoid:Q84JZ7 OMA:MWSFASN PhylomeDB:Q84JZ7
ProtClustDB:CLSN2682231 ArrayExpress:Q84JZ7 Genevestigator:Q84JZ7
Uniprot:Q84JZ7
Length = 263
Score = 631 (227.2 bits), Expect = 1.0e-61, P = 1.0e-61
Identities = 125/267 (46%), Positives = 166/267 (62%)
Query: 12 SLPVTAISGAIRLKNDALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYV 71
+L + ++G I KND +P +E SDDD S S++EGLECPICWESFN+VEN+PYV
Sbjct: 11 NLASSYLTGNIGPKNDIRRPVHAHAECSDDDVSSVGSKDEGLECPICWESFNIVENVPYV 70
Query: 72 LWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYL 131
LWCGHT+CKNC+LGLQ A+++LPT P QLP FI+CPWCN++S RL+ +G L+FP KNY++
Sbjct: 71 LWCGHTMCKNCILGLQWAIVKLPTHPVQLPLFISCPWCNLLSFRLVFRGTLRFPHKNYFV 130
Query: 132 LWMVESMNGDRSKSNPHFRGDHQPASSLNRNSAVRNQVSHAHNGRATCSHVSRQSEIRRD 191
LWMVE MNG+R +++P G Q + N+ H + C H +R + +
Sbjct: 131 LWMVERMNGER-RNSP---GGAQT----DGNN------DHTRETPSPCLH-NRHHRSQPE 175
Query: 192 EGRFLTGH-LNAERLQLSLRKSLVFFAQLTAKFPXXXXXXXXXXXXXXXXXXXXXXXXXX 250
R + H + + +Q SLRKSLVFF QLTAKFP
Sbjct: 176 PSRSVNDHRIPRDNIQTSLRKSLVFFVQLTAKFPLVVIFLLIILYAIPTSAAILAMYILV 235
Query: 251 XXVFAIPSCLVLYFALPILDWLVREII 277
+ A+PS L+LYFA P LDWLVREI+
Sbjct: 236 TLLLALPSFLILYFAYPCLDWLVREIV 262
>TAIR|locus:2007101 [details] [associations]
symbol:AT1G69330 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 EMBL:CP002684
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC018364 EMBL:AC073178 InterPro:IPR017907
ProtClustDB:CLSN2682231 EMBL:AY090372 EMBL:AY143833 IPI:IPI00544984
RefSeq:NP_564959.1 UniGene:At.35428 ProteinModelPortal:Q9C546
SMR:Q9C546 PRIDE:Q9C546 EnsemblPlants:AT1G69330.1 GeneID:843265
KEGG:ath:AT1G69330 TAIR:At1g69330 InParanoid:Q9C546 OMA:VLYFAYP
PhylomeDB:Q9C546 Genevestigator:Q9C546 Uniprot:Q9C546
Length = 270
Score = 566 (204.3 bits), Expect = 7.8e-55, P = 7.8e-55
Identities = 118/263 (44%), Positives = 158/263 (60%)
Query: 18 ISGAIRLKNDALKPSQVSSELSDDDASLNNSR-EEGLECPICWESFNVVENLPYVLWCGH 76
+ G++ LK +Q SS+ SDD+ S N SR EEGLECPICWESFN+VEN+PYVLWCGH
Sbjct: 8 VIGSMGLKKSPKDSAQASSQCSDDEVS-NISRDEEGLECPICWESFNIVENVPYVLWCGH 66
Query: 77 TLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVE 136
TLC+NCV GLQ AV+RL + ++PFF++CPWC ++S R++ KGNLKFP+KN++LLWMVE
Sbjct: 67 TLCQNCVFGLQSAVLRLSSQDIRIPFFVSCPWCQLLSFRIVYKGNLKFPRKNFFLLWMVE 126
Query: 137 SMNGDRSKSNPHFRGDHQPASSLNRNSAVRNQVSHAHNGRATCSHVSRQSEIRRDEGRFL 196
S+NGDR+ R H + N+ SA + S + ++ +++ + +R L
Sbjct: 127 SLNGDRTSHGD--RTSHGSLVTDNQQSAPTPRCSMSLGNHSSNNNLVARPLLRNQSTDLL 184
Query: 197 T--GHLNAERLQL-SLRKSLVFFAQLTAKFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXV 253
H N QL S KSL FF T+KFP +
Sbjct: 185 PHHDHSNQPSRQLFSFHKSLDFFISFTSKFPFVIIFLLIVFFAIPGSLIILALYFLLTIL 244
Query: 254 FAIPSCLVLYFALPILDWLVREI 276
FA+P+ LVLYFA PIL+ LV EI
Sbjct: 245 FAVPAGLVLYFAYPILERLVNEI 267
>TAIR|locus:2019080 [details] [associations]
symbol:AT1G74370 species:3702 "Arabidopsis thaliana"
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 EMBL:CP002684 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AC011765 UniGene:At.18127 UniGene:At.48371
ProtClustDB:CLSN2682231 EMBL:DQ059104 EMBL:BT024485 EMBL:AK228525
IPI:IPI00536253 PIR:D96772 RefSeq:NP_177577.1
ProteinModelPortal:Q9CA76 SMR:Q9CA76 PRIDE:Q9CA76
EnsemblPlants:AT1G74370.1 GeneID:843778 KEGG:ath:AT1G74370
TAIR:At1g74370 InParanoid:Q9CA76 OMA:GHTICKY PhylomeDB:Q9CA76
Genevestigator:Q9CA76 Uniprot:Q9CA76
Length = 261
Score = 549 (198.3 bits), Expect = 4.9e-53, P = 4.9e-53
Identities = 120/252 (47%), Positives = 152/252 (60%)
Query: 28 ALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQ 87
A KP + + + S D ++EE LECPICWESFNVVEN+PYVLWCGHT+CK C+LGLQ
Sbjct: 21 ATKPRRATLDRSGDGRK--TTKEEKLECPICWESFNVVENVPYVLWCGHTICKYCLLGLQ 78
Query: 88 RA-VIRLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVESMNGDRSKSN 146
RA VI+ LPFQLPFF+ CPWCN++SLRL+C G ++FP KN+YLLWMVESMNG RS++
Sbjct: 79 RAIVIKSSALPFQLPFFVACPWCNILSLRLVCNGTIRFPSKNFYLLWMVESMNGSRSEA- 137
Query: 147 PHFRGDHQPASSLNRNSAVR-NQVSHAHNG-RATCSHVSRQSEIRRDEGRFLTGHLNAER 204
P D++ +S R+ R + VS+ G + S + + R G F TG R
Sbjct: 138 P---SDNKRVASGQRDLRNRCDGVSNTALGDEGLLDNRSWWNGVTR--GFFRTG-----R 187
Query: 205 LQLSLRKSLVFFAQLTAKFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXVFAIPSCLVLYF 264
L S+RKS+ A L AKFP A+PS LVLYF
Sbjct: 188 LHDSVRKSMALVAHLLAKFPLVVIFLLMALYAIPVSAAVLGVYFFVTFALAVPSFLVLYF 247
Query: 265 ALPILDWLVREI 276
A P L+WL+REI
Sbjct: 248 AFPSLNWLIREI 259
>ZFIN|ZDB-GENE-070705-92 [details] [associations]
symbol:si:ch211-202f5.2 "si:ch211-202f5.2"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 ZFIN:ZDB-GENE-070705-92 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 eggNOG:NOG115591 GeneTree:ENSGT00510000050587
OrthoDB:EOG4T4CWQ EMBL:BX510338 IPI:IPI00854097
RefSeq:XP_001333631.1 RefSeq:XP_002662175.1 RefSeq:XP_002662202.1
UniGene:Dr.115093 Ensembl:ENSDART00000147875 GeneID:100334516
GeneID:795181 KEGG:dre:100334516 KEGG:dre:795181 HOVERGEN:HBG099151
NextBio:20932134 Uniprot:A5PMH4
Length = 187
Score = 131 (51.2 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 31/89 (34%), Positives = 48/89 (53%)
Query: 22 IRLKNDALKPSQVSSELSDDDASLNNSREEG-LECPICWESFNVVENLPYVLWCGHTLCK 80
I +K+ + + V ++ D DA NSR+ L+C +C+ ++N+ E LP L+CGHT C+
Sbjct: 23 ISVKDGPVSATPVEGDV-DADAGAQNSRDSRKLDCIVCYSAYNLGERLPRKLYCGHTFCQ 81
Query: 81 NCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
C+ RL TL +I CP C
Sbjct: 82 ACLK-------RLDTL-INEQMWIPCPQC 102
>UNIPROTKB|C9IZE0 [details] [associations]
symbol:TRIM59 "Tripartite motif-containing protein 59"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0043124 "negative regulation of I-kappaB kinase/NF-kappaB
cascade" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
EMBL:AC024221 OrthoDB:EOG4K3KX1 HGNC:HGNC:30834
HOGENOM:HOG000199013 IPI:IPI00945336 ProteinModelPortal:C9IZE0
SMR:C9IZE0 STRING:C9IZE0 Ensembl:ENST00000471155
ArrayExpress:C9IZE0 Bgee:C9IZE0 Uniprot:C9IZE0
Length = 114
Score = 100 (40.3 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 24/65 (36%), Positives = 35/65 (53%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTL-PFQLPFFITCPW 108
EE L CPIC+ F E+ P VL C HT C+NC+ + +A P ++P + CP
Sbjct: 5 EEELTCPICYSIF---ED-PRVLPCSHTFCRNCLENILQASGNFYIWRPLRIP--LKCPN 58
Query: 109 CNMVS 113
C ++
Sbjct: 59 CRSIT 63
>UNIPROTKB|C9J9F0 [details] [associations]
symbol:TRIM59 "Tripartite motif-containing protein 59"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0043124 "negative regulation of I-kappaB kinase/NF-kappaB
cascade" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
EMBL:AC024221 HGNC:HGNC:30834 HOGENOM:HOG000199013 IPI:IPI00945495
ProteinModelPortal:C9J9F0 SMR:C9J9F0 STRING:C9J9F0
Ensembl:ENST00000494486 ArrayExpress:C9J9F0 Bgee:C9J9F0
Uniprot:C9J9F0
Length = 111
Score = 100 (40.3 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 24/65 (36%), Positives = 35/65 (53%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTL-PFQLPFFITCPW 108
EE L CPIC+ F E+ P VL C HT C+NC+ + +A P ++P + CP
Sbjct: 5 EEELTCPICYSIF---ED-PRVLPCSHTFCRNCLENILQASGNFYIWRPLRIP--LKCPN 58
Query: 109 CNMVS 113
C ++
Sbjct: 59 CRSIT 63
>WB|WBGene00021763 [details] [associations]
symbol:Y51F10.2 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:FO081782 RefSeq:NP_740796.1
ProteinModelPortal:Q8WTJ8 SMR:Q8WTJ8 DIP:DIP-26335N IntAct:Q8WTJ8
MINT:MINT-1084696 STRING:Q8WTJ8 EnsemblMetazoa:Y51F10.2
GeneID:245998 KEGG:cel:CELE_Y51F10.2 UCSC:Y51F10.2 CTD:245998
WormBase:Y51F10.2 eggNOG:NOG275674 GeneTree:ENSGT00530000067894
HOGENOM:HOG000022225 InParanoid:Q8WTJ8 OMA:PLRVEMQ NextBio:951576
Uniprot:Q8WTJ8
Length = 305
Score = 119 (46.9 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 29/90 (32%), Positives = 48/90 (53%)
Query: 55 CPICWESFNVVENLPYVLWCGHTLCKNCVLGL--QRAVIRLPTLPFQLPFF-ITCPWCNM 111
C IC E F+ ++LP +L C HT+C+ C+ GL +++ I P F I CP C
Sbjct: 19 CRICLEPFDEGQHLPKILQCAHTVCERCI-GLLDEQSRINHNRPPIDRSFVHIRCPVC-- 75
Query: 112 VSLRLICKGNLKFPQKNYYLLWMVESMNGD 141
R + + + + NY L+ +++SM G+
Sbjct: 76 ---RAVTQTPRNYIRSNYQLIELMDSMRGE 102
>UNIPROTKB|Q5JVY0 [details] [associations]
symbol:TRIM32 "E3 ubiquitin-protein ligase TRIM32"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005863 "striated muscle myosin thick
filament" evidence=IEA] [GO:0009411 "response to UV" evidence=IEA]
[GO:0017022 "myosin binding" evidence=IEA] [GO:0031369 "translation
initiation factor binding" evidence=IEA] [GO:0034612 "response to
tumor necrosis factor" evidence=IEA] [GO:0045444 "fat cell
differentiation" evidence=IEA] [GO:0045666 "positive regulation of
neuron differentiation" evidence=IEA] [GO:0045732 "positive
regulation of protein catabolic process" evidence=IEA] [GO:0048147
"negative regulation of fibroblast proliferation" evidence=IEA]
[GO:0050769 "positive regulation of neurogenesis" evidence=IEA]
[GO:0051092 "positive regulation of NF-kappaB transcription factor
activity" evidence=IEA] [GO:2000147 "positive regulation of cell
motility" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 Prosite:PS00518 GO:GO:0005634 GO:GO:0009411
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0050769
GO:GO:0034612 GO:GO:0045666 GO:GO:0051092 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0048147 GO:GO:0004842 GO:GO:0045444
GO:GO:2000147 GO:GO:0045732 InterPro:IPR017907 EMBL:AL133284
GO:GO:0005863 UniGene:Hs.591910 HGNC:HGNC:16380 IPI:IPI00645015
SMR:Q5JVY0 IntAct:Q5JVY0 MINT:MINT-1461567 Ensembl:ENST00000411410
Uniprot:Q5JVY0
Length = 173
Score = 111 (44.1 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 24/55 (43%), Positives = 32/55 (58%)
Query: 45 LN-NSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPF 98
LN ++ E LECPIC ESF + P +L CGHT+C+ C+ L + I PF
Sbjct: 9 LNLDALREVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPF 63
>UNIPROTKB|C9JNB9 [details] [associations]
symbol:TRIM59 "Tripartite motif-containing protein 59"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC024221 HGNC:HGNC:30834
IPI:IPI00946347 ProteinModelPortal:C9JNB9 SMR:C9JNB9 STRING:C9JNB9
Ensembl:ENST00000468542 ArrayExpress:C9JNB9 Bgee:C9JNB9
Uniprot:C9JNB9
Length = 68
Score = 97 (39.2 bits), Expect = 0.00014, P = 0.00014
Identities = 24/61 (39%), Positives = 33/61 (54%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTL-PFQLPFFITCPW 108
EE L CPIC+ F E+ P VL C HT C+NC+ + +A P ++P + CP
Sbjct: 12 EEELTCPICYSIF---ED-PRVLPCSHTFCRNCLENILQASGNFYIWRPLRIP--LKCPN 65
Query: 109 C 109
C
Sbjct: 66 C 66
>WB|WBGene00206482 [details] [associations]
symbol:B0416.10 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:FO080200
RefSeq:NP_001257072.1 ProteinModelPortal:G1K0U6 SMR:G1K0U6
EnsemblMetazoa:B0416.10 GeneID:13222158 KEGG:cel:CELE_B0416.10
CTD:13222158 WormBase:B0416.10 Uniprot:G1K0U6
Length = 101
Score = 93 (37.8 bits), Expect = 0.00038, P = 0.00038
Identities = 23/60 (38%), Positives = 30/60 (50%)
Query: 24 LKNDALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCV 83
LK+ A K QV S + D + C +C F+ E +P VL CGHTLC NC+
Sbjct: 6 LKDLARKRKQVDSG-NGTDCCFKDGHLIWKLCELCLVPFDRSERMPKVLACGHTLCVNCM 64
>UNIPROTKB|Q6INB3 [details] [associations]
symbol:rnf182 "E3 ubiquitin-protein ligase RNF182"
species:8355 "Xenopus laevis" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0016567 "protein ubiquitination"
evidence=ISS] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 GO:GO:0005737
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 HSSP:Q13049 CTD:221687 KO:K11983
HOVERGEN:HBG060481 EMBL:BC072370 RefSeq:NP_001085077.1
UniGene:Xl.17893 ProteinModelPortal:Q6INB3 GeneID:432148
KEGG:xla:432148 Uniprot:Q6INB3
Length = 246
Score = 110 (43.8 bits), Expect = 0.00047, P = 0.00047
Identities = 31/100 (31%), Positives = 49/100 (49%)
Query: 34 VSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGL------Q 87
++S+LS+D++ N + LEC IC+ +N+ + P VL C H +C C+ L
Sbjct: 1 MTSQLSEDNSESPNLNSDELECKICYNRYNLRQRKPKVLGCCHRVCAKCLYKLVDCGESP 60
Query: 88 RAVIRLPTLPFQ--LPF--FITCPWCNMVSLRLICKGNLK 123
+ VI P F+ +P + P N + L L C G K
Sbjct: 61 QCVIVCPFCRFETRMPEDEVSSLPDDNNILLNLACGGRGK 100
>UNIPROTKB|C9IZ30 [details] [associations]
symbol:RNF182 "E3 ubiquitin-protein ligase RNF182"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AL138718 HGNC:HGNC:28522
IPI:IPI00945038 ProteinModelPortal:C9IZ30 SMR:C9IZ30 STRING:C9IZ30
Ensembl:ENST00000423553 ArrayExpress:C9IZ30 Bgee:C9IZ30
Uniprot:C9IZ30
Length = 82
Score = 91 (37.1 bits), Expect = 0.00063, P = 0.00063
Identities = 24/76 (31%), Positives = 37/76 (48%)
Query: 34 VSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRL 93
++S+ +D A S E LEC IC+ +N+ + P VL C H +C C+ +I
Sbjct: 1 MASQPPEDTAESQASDE--LECKICYNRYNLKQRKPKVLECCHRVCAKCLY----KIIDF 54
Query: 94 PTLPFQLPFFITCPWC 109
P + I CP+C
Sbjct: 55 GDSPQGV---IVCPFC 67
>WB|WBGene00020628 [details] [associations]
symbol:T20F5.6 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:FO080916 PIR:T29211 RefSeq:NP_491266.1
ProteinModelPortal:P91482 SMR:P91482 IntAct:P91482 MINT:MINT-114502
STRING:P91482 PaxDb:P91482 EnsemblMetazoa:T20F5.6.1
EnsemblMetazoa:T20F5.6.2 GeneID:171978 KEGG:cel:CELE_T20F5.6
UCSC:T20F5.6.1 CTD:171978 WormBase:T20F5.6 eggNOG:NOG285661
InParanoid:P91482 OMA:ALELEWI NextBio:873501 Uniprot:P91482
Length = 794
Score = 116 (45.9 bits), Expect = 0.00066, P = 0.00066
Identities = 32/109 (29%), Positives = 48/109 (44%)
Query: 41 DDASLNNSREE--GLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPF 98
DD L + E GL C IC++ FN + +P V CGHT+C C+ L L T F
Sbjct: 100 DDTILTSKGTEMKGLSCGICYDPFNTGKRIPKVFPCGHTICLQCIKKL------LNTRTF 153
Query: 99 QLPFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVESMNGDRSKSNP 147
+ CP C + + K P N+ + ++E ++S P
Sbjct: 154 LGGNTVICPSCRQNTRYSLTTPADKIPT-NFCIQSLLEQRQQEKSTKEP 201
>WB|WBGene00022873 [details] [associations]
symbol:ZK1240.9 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
PROSITE:PS50089 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00530000064633
EMBL:FO080152 HOGENOM:HOG000113967 eggNOG:NOG275674
RefSeq:NP_494238.2 UniGene:Cel.13709 ProteinModelPortal:Q95X87
SMR:Q95X87 DIP:DIP-26468N IntAct:Q95X87 MINT:MINT-1064113
PaxDb:Q95X87 EnsemblMetazoa:ZK1240.9 GeneID:173587
KEGG:cel:CELE_ZK1240.9 UCSC:ZK1240.9 CTD:173587 WormBase:ZK1240.9
InParanoid:Q95X87 NextBio:880283 Uniprot:Q95X87
Length = 216
Score = 106 (42.4 bits), Expect = 0.00099, P = 0.00099
Identities = 43/177 (24%), Positives = 79/177 (44%)
Query: 53 LECPICWESFNVVE--NLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
L+C +C E ++ ++ ++P VL CGH++C+NC L A++ I CP+C
Sbjct: 4 LQCEVCNEDYSDIDEDHIPKVLKCGHSVCQNCATQLITALL------------IICPFCR 51
Query: 111 MVSLRLICKGNLKFPQKNYYLLWMVESMNGD---RSKSNPHFRGDH---QP-ASSLNRNS 163
+ I G+ + QKN+ L+ ++ M D + + +P+ + +P SS N+
Sbjct: 52 ETTE--ISDGDDQKLQKNFALVQAIQVMKADSPPKCEEHPYNLAEFVCVKPRCSSSNKLM 109
Query: 164 AVRNQVSHAHNGRATCSHVSRQSEIRRDEG-RFLTGHLNAERLQLSLRKSLVFFAQL 219
+ H ++ S +R G R E+LQ + + + AQL
Sbjct: 110 CKTCEEFGVHRNHKKSLLLTEASSLRESLGFRIEKRETQIEKLQEDI--NTINLAQL 164
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.137 0.435 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 278 250 0.00080 114 3 11 22 0.39 33
32 0.46 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 14
No. of states in DFA: 605 (64 KB)
Total size of DFA: 205 KB (2114 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.39u 0.09s 21.48t Elapsed: 00:00:03
Total cpu time: 21.40u 0.09s 21.49t Elapsed: 00:00:03
Start: Mon May 20 23:57:13 2013 End: Mon May 20 23:57:16 2013