BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023737
(278 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255547293|ref|XP_002514704.1| ubiquitin-protein ligase, putative [Ricinus communis]
gi|223546308|gb|EEF47810.1| ubiquitin-protein ligase, putative [Ricinus communis]
Length = 269
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/267 (70%), Positives = 213/267 (79%)
Query: 12 SLPVTAISGAIRLKNDALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYV 71
S AISG I LKND LK Q SSE SDD+ +NNSREEGLECPICWESFN+VEN+PYV
Sbjct: 3 SFASRAISGTIGLKNDLLKLRQASSECSDDEPFVNNSREEGLECPICWESFNIVENVPYV 62
Query: 72 LWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYL 131
LWCGHTLCKNCVLGLQRA+++ LP QLPFFI+CPWCN++SLRL+ KGNL+FP+KNY+L
Sbjct: 63 LWCGHTLCKNCVLGLQRAIVKPLPLPIQLPFFISCPWCNLLSLRLVYKGNLRFPRKNYFL 122
Query: 132 LWMVESMNGDRSKSNPHFRGDHQPASSLNRNSAVRNQVSHAHNGRATCSHVSRQSEIRRD 191
LWMVES+NGDRSKS F GD+QP S NRN V NQV N RA C+H +RQ +
Sbjct: 123 LWMVESLNGDRSKSYFSFHGDNQPVCSSNRNVPVGNQVGQVINRRALCTHPTRQLVPNHN 182
Query: 192 EGRFLTGHLNAERLQLSLRKSLVFFAQLTAKFPLIIVLILIILYAIPASAAILALYILIT 251
EG +LNAERLQLSLRKSL F LTAKFPLI + +L+ILYAIPASAAILALYILIT
Sbjct: 183 EGWLNNSYLNAERLQLSLRKSLALFVHLTAKFPLIAIFLLVILYAIPASAAILALYILIT 242
Query: 252 IVFAIPSCLVLYFALPILDWLVREIIA 278
+VFA+PS L+LYFALP LDWLVREII
Sbjct: 243 LVFALPSFLILYFALPSLDWLVREIIT 269
>gi|225457307|ref|XP_002284521.1| PREDICTED: uncharacterized protein LOC100241642 [Vitis vinifera]
Length = 268
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/263 (68%), Positives = 209/263 (79%), Gaps = 1/263 (0%)
Query: 16 TAISGAIRLKNDALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCG 75
A+SG LKND LKP+Q SE SDD+ S N SREEGLECPICWESFN+VEN+PYVLWCG
Sbjct: 7 NALSGTNGLKNDLLKPNQAPSECSDDEISTNTSREEGLECPICWESFNIVENVPYVLWCG 66
Query: 76 HTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMV 135
HTLCKNCVLGLQ AV++ PTLP QLPFFI+CPWCN++S RL+ KGNL FP+KN++LLWMV
Sbjct: 67 HTLCKNCVLGLQWAVVKFPTLPIQLPFFISCPWCNLLSFRLVYKGNLTFPRKNFFLLWMV 126
Query: 136 ESMNGDRSKSNPHFRGDHQPASSLNRNSAVRNQVSHAHNGRATCSHVSRQSEIRRDEGRF 195
ESMNGDR KS+ F DHQP S NRN + NQ SH ++ R SH+ QSE D G
Sbjct: 127 ESMNGDRGKSHSSF-CDHQPGWSSNRNLIIGNQGSHVNHRRPPYSHLPEQSESNHDGGHL 185
Query: 196 LTGHLNAERLQLSLRKSLVFFAQLTAKFPLIIVLILIILYAIPASAAILALYILITIVFA 255
+ LN ERL LS+RKSLVFF LTAKFPL+I+ +LI+LYAIPASAAILALYILIT++FA
Sbjct: 186 INRFLNIERLHLSVRKSLVFFVHLTAKFPLVIIFLLIVLYAIPASAAILALYILITVLFA 245
Query: 256 IPSCLVLYFALPILDWLVREIIA 278
+PS L+LYFA P LDWLVREII
Sbjct: 246 LPSFLILYFAYPSLDWLVREIIT 268
>gi|224121490|ref|XP_002318595.1| predicted protein [Populus trichocarpa]
gi|222859268|gb|EEE96815.1| predicted protein [Populus trichocarpa]
Length = 266
Score = 339 bits (870), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 175/264 (66%), Positives = 205/264 (77%), Gaps = 9/264 (3%)
Query: 18 ISGAIRLKNDALKPSQ-VSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGH 76
I G IRLK+D LKP Q +S + SDD+ SLN+SRE+ LECPICWESFN+VEN+PYVLWCGH
Sbjct: 9 IRGTIRLKHDFLKPRQALSGQCSDDEPSLNSSREDRLECPICWESFNIVENVPYVLWCGH 68
Query: 77 TLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVE 136
+LCKNCVLGLQ A+++LPTLP LPFFI+CPWCNM+S RL+ KG L+FP KNY+LLWMVE
Sbjct: 69 SLCKNCVLGLQWALVKLPTLPILLPFFISCPWCNMLSFRLVYKGILRFPCKNYFLLWMVE 128
Query: 137 SMNGDRSKSNPHFRGDHQPASSLNRNSAVRNQVS-HAHNGRATCSHV-SRQSEIRRDEGR 194
SMNGDRS S F DHQP + LN N NQV+ N A + S QS RD
Sbjct: 129 SMNGDRS-SFSSFHNDHQPVAPLNNNPTTGNQVNPEVGNRHAMRVQIPSEQSLPNRDPSY 187
Query: 195 FLTGHLNAERLQLSLRKSLVFFAQLTAKFPLIIVLILIILYAIPASAAILALYILITIVF 254
F N+ERL LSLRKSLVFFA +TAKFPLI++ +LI+LYAIP SAAILALYILIT+VF
Sbjct: 188 F-----NSERLHLSLRKSLVFFAHMTAKFPLIVMFLLIVLYAIPTSAAILALYILITLVF 242
Query: 255 AIPSCLVLYFALPILDWLVREIIA 278
A+PS L+LYF+LP LDWLVREII
Sbjct: 243 ALPSFLILYFSLPSLDWLVREIIT 266
>gi|359806827|ref|NP_001241055.1| uncharacterized protein LOC100809368 [Glycine max]
gi|255644418|gb|ACU22714.1| unknown [Glycine max]
Length = 264
Score = 334 bits (856), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 164/263 (62%), Positives = 204/263 (77%), Gaps = 9/263 (3%)
Query: 18 ISGAIRLKNDALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHT 77
I+G + LKND+ KP+ +SE SDD+ S+ REEGLECPICWESFN+VEN+PYVLWCGHT
Sbjct: 9 IAGTVGLKNDS-KPTHSASECSDDENSVI-GREEGLECPICWESFNIVENVPYVLWCGHT 66
Query: 78 LCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVES 137
LCKNC+LGLQ AV++ PTLP QLP FI+CPWCN++S RL+ +GNLKFP+KNY+LLWMVES
Sbjct: 67 LCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYRGNLKFPRKNYFLLWMVES 126
Query: 138 MNGDRSKSNPHFRGDHQPASSLNRNSAVRNQVSHAHNGRATCSH--VSRQSEIRRDEGRF 195
MNGDR KS+ F GD+Q S+ N + +QVSH + R H S ++ + G
Sbjct: 127 MNGDRGKSHSPFCGDNQ-QHSIKDNLTMGSQVSHGNLRRGLVRHPETSSSNQYHGNTGN- 184
Query: 196 LTGHLNAERLQLSLRKSLVFFAQLTAKFPLIIVLILIILYAIPASAAILALYILITIVFA 255
HLN ER + LRKSL+FF QLTAKFPL+I+ +LI+LYAIPASAAILALY+L+TI+FA
Sbjct: 185 ---HLNTERFHVYLRKSLIFFVQLTAKFPLVIIFLLIVLYAIPASAAILALYVLVTILFA 241
Query: 256 IPSCLVLYFALPILDWLVREIIA 278
+PS L+LYF+ P LDWLVREII
Sbjct: 242 LPSFLILYFSYPSLDWLVREIIT 264
>gi|225452936|ref|XP_002284184.1| PREDICTED: uncharacterized protein LOC100262874 [Vitis vinifera]
Length = 269
Score = 328 bits (841), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 168/262 (64%), Positives = 208/262 (79%), Gaps = 2/262 (0%)
Query: 18 ISGAIRLKNDALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHT 77
I+G++ LKN++ KP+QV+SE SDD+ S N SREEGLECPIC+ESFN+VEN+PYVLWCGHT
Sbjct: 9 IAGSVGLKNNSPKPTQVASECSDDEVSSNISREEGLECPICFESFNIVENVPYVLWCGHT 68
Query: 78 LCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVES 137
LCKNC+LGL AV++ PTLP QLP FI+CPWCN++S RL+ KG+LKFP+KNY+LLWM+ES
Sbjct: 69 LCKNCILGLHWAVVKFPTLPIQLPLFISCPWCNLLSFRLVYKGSLKFPRKNYFLLWMLES 128
Query: 138 MNGDRSKSNPHFRGD-HQPASSLNRNSAVRNQVSHAHNGRATCSHVSRQSEIRRDEGRFL 196
MNGDR KS+ F GD HQP S + N A+ +QV+H R H S S ++G +
Sbjct: 129 MNGDREKSHSSFSGDHHQPVWSSDSNLALGSQVNHRILRREQFIHHSGPSGSNHEDGH-V 187
Query: 197 TGHLNAERLQLSLRKSLVFFAQLTAKFPLIIVLILIILYAIPASAAILALYILITIVFAI 256
+L ERL SL KSLVFF QLTAKFPL+++L+LI+LYAIPASAAILALYILIT++FA+
Sbjct: 188 NNYLTLERLHSSLHKSLVFFVQLTAKFPLVVILLLIVLYAIPASAAILALYILITVLFAL 247
Query: 257 PSCLVLYFALPILDWLVREIIA 278
PS L+LYFA P LDWL REII
Sbjct: 248 PSVLMLYFAYPSLDWLAREIIT 269
>gi|356573143|ref|XP_003554723.1| PREDICTED: uncharacterized protein LOC100815196 [Glycine max]
Length = 264
Score = 327 bits (837), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 162/263 (61%), Positives = 199/263 (75%), Gaps = 9/263 (3%)
Query: 18 ISGAIRLKNDALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHT 77
I+G + LKND+ KP+ +SE SDD+ S+ REEGLECPICWESFN+VEN+PYVLWCGHT
Sbjct: 9 IAGTVGLKNDS-KPTHSASECSDDETSVI-GREEGLECPICWESFNIVENVPYVLWCGHT 66
Query: 78 LCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVES 137
LCKNC+LGLQ AV++ PTLP QLP FI+CPWCN++S RL+ +GNLKFP+KNY+LLWMVES
Sbjct: 67 LCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLMSFRLVYRGNLKFPRKNYFLLWMVES 126
Query: 138 MNGDRSKSNPHFRGDHQPASSLNRNSAVRNQVSHAHNGRATCSHVSRQSE--IRRDEGRF 195
MNGDR KS+ F D+Q S+ N +QVSH + R H S + G
Sbjct: 127 MNGDRGKSHSPFCSDNQ-QHSIKDNLTTGSQVSHGNLRRGQVCHPETLSSNLYHGNTGN- 184
Query: 196 LTGHLNAERLQLSLRKSLVFFAQLTAKFPLIIVLILIILYAIPASAAILALYILITIVFA 255
HLN ER + L KSL+FF QLTAKFPL+I+ +LI+LYAIPASAAILALY+L+TI+FA
Sbjct: 185 ---HLNTERFHVYLWKSLIFFVQLTAKFPLVIIFLLIVLYAIPASAAILALYVLVTILFA 241
Query: 256 IPSCLVLYFALPILDWLVREIIA 278
+PS L+LYF+ P LDWLVREII
Sbjct: 242 LPSFLILYFSYPSLDWLVREIIT 264
>gi|224141043|ref|XP_002323884.1| predicted protein [Populus trichocarpa]
gi|118481933|gb|ABK92900.1| unknown [Populus trichocarpa]
gi|222866886|gb|EEF04017.1| predicted protein [Populus trichocarpa]
Length = 267
Score = 326 bits (835), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 167/261 (63%), Positives = 203/261 (77%), Gaps = 2/261 (0%)
Query: 18 ISGAIRLKNDALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHT 77
++G++ L N++LKP+QV SE SDD+AS SREEGLECPICWESFN+VEN+PYVLWCGHT
Sbjct: 9 LAGSVSL-NNSLKPAQVPSEYSDDEASSVVSREEGLECPICWESFNIVENVPYVLWCGHT 67
Query: 78 LCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVES 137
LCKNC+LGLQ AV++ PTLP QLP FI+CPWCN++S RL+ +GNLKFP+KNY+LLWMVES
Sbjct: 68 LCKNCILGLQWAVVKFPTLPIQLPLFISCPWCNLLSFRLVYRGNLKFPRKNYFLLWMVES 127
Query: 138 MNGDRSKSNPHFRGDHQPASSLNRNSAVRNQVSHAHNGRATCSHVSRQSEIRRDEGRFLT 197
NGDR KS+ F D QP S + N A+ NQ S + R H + SE D +
Sbjct: 128 KNGDREKSHGTFCEDQQPHWSSDSNLALGNQASRGNIRRGQYVHHAEPSEANHDHNH-VN 186
Query: 198 GHLNAERLQLSLRKSLVFFAQLTAKFPLIIVLILIILYAIPASAAILALYILITIVFAIP 257
+LN R+ SL+KSLVFF LTAKFPL+I+ +LIILYAIPASAAILALYILIT++FA+P
Sbjct: 187 SYLNVRRIHSSLQKSLVFFVHLTAKFPLVIIFLLIILYAIPASAAILALYILITVLFALP 246
Query: 258 SCLVLYFALPILDWLVREIIA 278
S L+LYFA P LDWLVREII
Sbjct: 247 SFLILYFAYPSLDWLVREIIT 267
>gi|388503120|gb|AFK39626.1| unknown [Lotus japonicus]
Length = 266
Score = 315 bits (807), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 162/264 (61%), Positives = 201/264 (76%), Gaps = 7/264 (2%)
Query: 16 TAISGAIRLKNDALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCG 75
+ ISG++ LKND LKP+ +SE SDD+ S+ +REEGLECPICWESFN+VEN+PY LWCG
Sbjct: 7 SCISGSVGLKNDCLKPTHSASECSDDETSMT-TREEGLECPICWESFNIVENVPYFLWCG 65
Query: 76 HTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMV 135
HTLCKNC+LGLQ A+++ PTLP QLP FI+CPWCN++S RL+ +GNLKFP+KNY+LLWM+
Sbjct: 66 HTLCKNCILGLQWAMVKFPTLPIQLPLFISCPWCNILSFRLVHQGNLKFPRKNYFLLWMI 125
Query: 136 ESMNGDRSKSNPHFRGDHQPASSLNRNSAVRNQVSHAHNGRATCSH--VSRQSEIRRDEG 193
ESMNGDR+ + GD QP NS + +Q+S + R H +S ++ + G
Sbjct: 126 ESMNGDRATPHSTRCGDDQPVWPGKENSTMGSQLSLGNPRRRQVHHPELSNSNQFNGNTG 185
Query: 194 RFLTGHLNAERLQLSLRKSLVFFAQLTAKFPLIIVLILIILYAIPASAAILALYILITIV 253
HL ERL SLRKSLV F LTAKFPLII+ +LI+LYAIPASAAILALYI+ITI+
Sbjct: 186 ----NHLRMERLHTSLRKSLVLFVHLTAKFPLIIIFLLIVLYAIPASAAILALYIVITIL 241
Query: 254 FAIPSCLVLYFALPILDWLVREII 277
FA+PS L+LYFA P LDWLVREII
Sbjct: 242 FALPSFLILYFAYPSLDWLVREII 265
>gi|356526471|ref|XP_003531841.1| PREDICTED: uncharacterized protein LOC100811549 isoform 1 [Glycine
max]
gi|356526473|ref|XP_003531842.1| PREDICTED: uncharacterized protein LOC100811549 isoform 2 [Glycine
max]
Length = 267
Score = 312 bits (800), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 165/271 (60%), Positives = 202/271 (74%), Gaps = 8/271 (2%)
Query: 9 FPSSLPVTAISGAIRLKNDALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENL 68
F SSL I+G++ LKND+ KP+ +SE SDD+ S+ +REE LECPICWESFN+VEN+
Sbjct: 4 FASSL----IAGSVGLKNDSAKPTHPASECSDDETSMV-TREERLECPICWESFNIVENV 58
Query: 69 PYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKN 128
PYVLWCGHTLCKNC+LGLQ AV++ PTLP QLP FI+CPWCN++SLRL+ +GNLKFP+KN
Sbjct: 59 PYVLWCGHTLCKNCILGLQWAVVKFPTLPIQLPLFISCPWCNLLSLRLVYRGNLKFPRKN 118
Query: 129 YYLLWMVESMNGDRSKSNPHFRGDHQPASSLNRNSAVR-NQVSHAHNGRATCSHVSRQSE 187
Y+LLWMVESMNGDR KS+ GDHQP + ++S +Q H R H S
Sbjct: 119 YFLLWMVESMNGDRVKSHSTVCGDHQPVWPIIKDSLTNGSQEGHGIPWRGQVCHTESSSS 178
Query: 188 IRRDEGRFLTGHLNAERLQLSLRKSLVFFAQLTAKFPLIIVLILIILYAIPASAAILALY 247
+ + +L+ E L SLRKSLV F L AKFPLII+ +LI+LYAIPASAAILALY
Sbjct: 179 NQYHGNT--SNYLSIETLHTSLRKSLVLFVHLIAKFPLIIIFLLIVLYAIPASAAILALY 236
Query: 248 ILITIVFAIPSCLVLYFALPILDWLVREIIA 278
IL+TI+FA+PS L+LYFA P LDWLVREII
Sbjct: 237 ILVTILFALPSFLILYFAYPSLDWLVREIIT 267
>gi|357496653|ref|XP_003618615.1| CCP [Medicago truncatula]
gi|217074134|gb|ACJ85427.1| unknown [Medicago truncatula]
gi|355493630|gb|AES74833.1| CCP [Medicago truncatula]
gi|388508162|gb|AFK42147.1| unknown [Medicago truncatula]
Length = 266
Score = 310 bits (794), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 158/263 (60%), Positives = 200/263 (76%), Gaps = 7/263 (2%)
Query: 18 ISGAIRLKNDALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHT 77
I+G + LK D+ P+ +SE SDD+ S+ REEGLECP+CWESFN+VEN+PYVLWCGHT
Sbjct: 9 IAGNVGLKKDSSNPTHSASECSDDETSVV-GREEGLECPVCWESFNIVENVPYVLWCGHT 67
Query: 78 LCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVES 137
LCKNC+LGLQ A ++ PTLP QLP FI+CPWCN++S RL+ +GNL+FP+KNY+LLWMVE
Sbjct: 68 LCKNCILGLQWATVKFPTLPVQLPLFISCPWCNLLSFRLVYRGNLRFPRKNYFLLWMVEG 127
Query: 138 MNGDRSKSNPHFRGDHQPASSLNRNSAVRNQVSHAH--NGRATCSHVSRQSEIRRDEGRF 195
MNGDR KS+ GD+Q + N + QV+H + G+ S S+ R +
Sbjct: 128 MNGDRVKSHSTCCGDNQQQCASKGNLTLGGQVNHGNLQGGQVHPPDTSNSSQPRANT--- 184
Query: 196 LTGHLNAERLQLSLRKSLVFFAQLTAKFPLIIVLILIILYAIPASAAILALYILITIVFA 255
HL+ ER+ +SLRKSL+FF QLTAKFPLII+ +LIILYA+PASAAILALYIL+TI+FA
Sbjct: 185 -RNHLDMERVHISLRKSLIFFVQLTAKFPLIIIFLLIILYAVPASAAILALYILVTILFA 243
Query: 256 IPSCLVLYFALPILDWLVREIIA 278
+PS L+LYF+ P LDWLVREIIA
Sbjct: 244 LPSFLILYFSYPSLDWLVREIIA 266
>gi|356568704|ref|XP_003552550.1| PREDICTED: uncharacterized protein LOC100799346 isoform 1 [Glycine
max]
gi|356568706|ref|XP_003552551.1| PREDICTED: uncharacterized protein LOC100799346 isoform 2 [Glycine
max]
Length = 266
Score = 310 bits (793), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 166/271 (61%), Positives = 201/271 (74%), Gaps = 9/271 (3%)
Query: 9 FPSSLPVTAISGAIRLKNDALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENL 68
F SSL I+G++ LKND+ KP+ +SE SDD+ S+ SREE LECPICWESFN+VEN+
Sbjct: 4 FASSL----IAGSVGLKNDSPKPTHSASEFSDDETSMV-SREERLECPICWESFNIVENV 58
Query: 69 PYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKN 128
PYVLWCGHTLCKNC+LGLQ AV+ PTLP +LP FI+CPWCN++SLRL+ +GNLKFP KN
Sbjct: 59 PYVLWCGHTLCKNCILGLQWAVVNFPTLPIRLPLFISCPWCNLLSLRLVYQGNLKFPHKN 118
Query: 129 YYLLWMVESMNGDRSKSNPHFRGDHQPASSLNRNSAVRNQVSH-AHNGRATCSHVSRQSE 187
Y+LLWMVESMNGDR KS+ GDHQP + + +QVSH + G C S S
Sbjct: 119 YFLLWMVESMNGDRVKSHSTVCGDHQPVWPIIDSLTNGSQVSHDSLQGGQVCHPESSSSN 178
Query: 188 IRRDEGRFLTGHLNAERLQLSLRKSLVFFAQLTAKFPLIIVLILIILYAIPASAAILALY 247
+ + +L+ E L SLRKSLV F LTAKFPLII+ +LI+LYAIP AAILALY
Sbjct: 179 HYHGDT---SNYLSIETLHTSLRKSLVLFVHLTAKFPLIIIFLLIVLYAIPVIAAILALY 235
Query: 248 ILITIVFAIPSCLVLYFALPILDWLVREIIA 278
IL+TI+FA+PS L+LYFA P LDWLVREII
Sbjct: 236 ILVTILFALPSFLILYFAYPSLDWLVREIIT 266
>gi|449446247|ref|XP_004140883.1| PREDICTED: uncharacterized protein LOC101203968 isoform 1 [Cucumis
sativus]
gi|449446249|ref|XP_004140884.1| PREDICTED: uncharacterized protein LOC101203968 isoform 2 [Cucumis
sativus]
gi|449499448|ref|XP_004160820.1| PREDICTED: uncharacterized LOC101203968 isoform 1 [Cucumis sativus]
gi|449499451|ref|XP_004160821.1| PREDICTED: uncharacterized LOC101203968 isoform 2 [Cucumis sativus]
Length = 265
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 152/261 (58%), Positives = 194/261 (74%), Gaps = 4/261 (1%)
Query: 18 ISGAIRLKNDALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHT 77
++G LK+ + K S ++E SDD+ S ++ REE LECPICWESFN+VEN+P+VLWCGHT
Sbjct: 9 VAGCAGLKSSSRKSSHTATECSDDELS-SDGREEVLECPICWESFNIVENVPHVLWCGHT 67
Query: 78 LCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVES 137
LCKNC+LGLQ AV++ PTLP QLP FI+CPWCN++S RL+ KGNLKFP KNY+LLWMVE+
Sbjct: 68 LCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYFLLWMVEN 127
Query: 138 MNGDRSKSNPHFRGDHQPASSLNRNSAVRNQVSHAHNGRATCSHVSRQSEIRRDEGRFLT 197
+N +R KS+ F GD Q ++ S+ NQVSH + R HV + +
Sbjct: 128 INVERVKSHSAFSGD-QLVFPVSGTSSRGNQVSHNNLRRG--HHVRQLDSQGPNNANSHF 184
Query: 198 GHLNAERLQLSLRKSLVFFAQLTAKFPLIIVLILIILYAIPASAAILALYILITIVFAIP 257
N ERLQ SLRK LVFF LTAKFPL+I+ +LI+LYA+PASAAILALY+L+T++FA+P
Sbjct: 185 HSFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTVLFALP 244
Query: 258 SCLVLYFALPILDWLVREIIA 278
S L+LYFA P LDWL+REII
Sbjct: 245 SFLILYFAYPSLDWLMREIIT 265
>gi|224080187|ref|XP_002306045.1| predicted protein [Populus trichocarpa]
gi|222849009|gb|EEE86556.1| predicted protein [Populus trichocarpa]
Length = 266
Score = 304 bits (779), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 161/261 (61%), Positives = 198/261 (75%), Gaps = 3/261 (1%)
Query: 18 ISGAIRLKNDALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHT 77
++G++ + N++ KP+QV SE SDD+AS + SREE LECPICWESFN+VEN+PYVLWCGHT
Sbjct: 9 LAGSVSM-NNSTKPTQVPSEYSDDEAS-SFSREEALECPICWESFNIVENVPYVLWCGHT 66
Query: 78 LCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVES 137
LCKNCVLGLQ AV++ PTLP +LP FI+CPWCN+ S R + +GNLKFP+KNY+LLWMVES
Sbjct: 67 LCKNCVLGLQWAVVKFPTLPIRLPLFISCPWCNLSSFRFVYRGNLKFPRKNYFLLWMVES 126
Query: 138 MNGDRSKSNPHFRGDHQPASSLNRNSAVRNQVSHAHNGRATCSHVSRQSEIRRDEGRFLT 197
NGDR KS F DHQP S + N A ++VS + R H S S D +
Sbjct: 127 KNGDRDKSPGTFCEDHQPHWSSDSNLAHGSRVSRGNIRRGHYIHHSEPSGTHHDHNH-VN 185
Query: 198 GHLNAERLQLSLRKSLVFFAQLTAKFPLIIVLILIILYAIPASAAILALYILITIVFAIP 257
+LN ER+ SL+KSL FF LTAKFPL+I+ +LIILY IPASA+ILALYILIT++FA+P
Sbjct: 186 SYLNVERIHSSLQKSLAFFVSLTAKFPLVIIFLLIILYVIPASASILALYILITVLFALP 245
Query: 258 SCLVLYFALPILDWLVREIIA 278
S L+LYFA P LDWLVREII
Sbjct: 246 SFLILYFAYPSLDWLVREIIT 266
>gi|296082977|emb|CBI22278.3| unnamed protein product [Vitis vinifera]
Length = 241
Score = 303 bits (775), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 158/261 (60%), Positives = 196/261 (75%), Gaps = 28/261 (10%)
Query: 18 ISGAIRLKNDALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHT 77
I+G++ LKN++ KP+QV+SE SDD+ S N SREEGLECPIC+ESFN+VEN+PYVLWCGHT
Sbjct: 9 IAGSVGLKNNSPKPTQVASECSDDEVSSNISREEGLECPICFESFNIVENVPYVLWCGHT 68
Query: 78 LCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVES 137
LCKNC+LGL AV++ PTLP QLP FI+CPWCN++S RL+ KG+LKFP+KNY+LLWM+ES
Sbjct: 69 LCKNCILGLHWAVVKFPTLPIQLPLFISCPWCNLLSFRLVYKGSLKFPRKNYFLLWMLES 128
Query: 138 MNGDRSKSNPHFRGDHQPASSLNRNSAVRNQVSHAHNGRATCSHVSRQSEIRRDEGRFLT 197
MNGDR KS+ + R Q H H+G + +H E +
Sbjct: 129 MNGDREKSH-----------------SSREQFIH-HSGPSGSNH----------EDGHVN 160
Query: 198 GHLNAERLQLSLRKSLVFFAQLTAKFPLIIVLILIILYAIPASAAILALYILITIVFAIP 257
+L ERL SL KSLVFF QLTAKFPL+++L+LI+LYAIPASAAILALYILIT++FA+P
Sbjct: 161 NYLTLERLHSSLHKSLVFFVQLTAKFPLVVILLLIVLYAIPASAAILALYILITVLFALP 220
Query: 258 SCLVLYFALPILDWLVREIIA 278
S L+LYFA P LDWL REII
Sbjct: 221 SVLMLYFAYPSLDWLAREIIT 241
>gi|242035431|ref|XP_002465110.1| hypothetical protein SORBIDRAFT_01g032180 [Sorghum bicolor]
gi|241918964|gb|EER92108.1| hypothetical protein SORBIDRAFT_01g032180 [Sorghum bicolor]
Length = 267
Score = 298 bits (764), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 144/244 (59%), Positives = 180/244 (73%), Gaps = 1/244 (0%)
Query: 35 SSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLP 94
S+ SDD+AS SREEGLECPICWESFN+VEN+PYVLWCGHT+CKNC+LGLQ AVI++P
Sbjct: 25 SAAGSDDEASSCTSREEGLECPICWESFNIVENVPYVLWCGHTMCKNCILGLQWAVIKVP 84
Query: 95 TLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVESMNGDRSKSNPHFRGDHQ 154
T+P QLPFFI CPWCN++SLR++ KGNL FP+KNY+LLWMVE MNG+R++S P + Q
Sbjct: 85 TVPIQLPFFICCPWCNLLSLRILYKGNLTFPRKNYFLLWMVEGMNGERARSRPAIHSEQQ 144
Query: 155 PASSLNRNSAVRNQVSHAHNGRATCSHVSRQSEIRRDEGRFLTGHLNAERLQLSLRKSLV 214
L+ +S +++ R S + LNAER+Q SLRKSL
Sbjct: 145 -TPWLSSSSRSNGNAGYSNPTRRHLPPPVDMSPTNANHSNHGVPLLNAERVQASLRKSLS 203
Query: 215 FFAQLTAKFPLIIVLILIILYAIPASAAILALYILITIVFAIPSCLVLYFALPILDWLVR 274
F LTAKFPL+ + +LI+LYAIPASAA+L LY+LIT++FA+PS L+LYFA P LDWLVR
Sbjct: 204 FLVHLTAKFPLVFIFLLIVLYAIPASAAVLLLYVLITVLFALPSFLILYFAYPSLDWLVR 263
Query: 275 EIIA 278
EI A
Sbjct: 264 EIFA 267
>gi|226506794|ref|NP_001152075.1| RING zinc finger protein-like [Zea mays]
gi|195652369|gb|ACG45652.1| RING zinc finger protein-like [Zea mays]
gi|223948587|gb|ACN28377.1| unknown [Zea mays]
gi|413955489|gb|AFW88138.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 272
Score = 297 bits (761), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 152/258 (58%), Positives = 184/258 (71%), Gaps = 24/258 (9%)
Query: 35 SSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLP 94
S+ SDD+AS SREEGLECPICWESFN+VEN+PYVLWCGHTLCKNCVLGLQ AVI++P
Sbjct: 25 SAACSDDEASSCTSREEGLECPICWESFNIVENVPYVLWCGHTLCKNCVLGLQWAVIKVP 84
Query: 95 TLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVESMNGDRSKSNPHFRGD-H 153
T+P QLPFF+ CPWCN++SLR++ KGNL FP+KNY+LLWMVE MNG+R++S P + H
Sbjct: 85 TVPMQLPFFVCCPWCNLLSLRILYKGNLTFPRKNYFLLWMVEGMNGERARSRPATHSEQH 144
Query: 154 QPASSLNRNSAVRNQVSHAHNGRATCSHVSRQS-------EIRRDEGRFLTGH------L 200
P S S NG A CS+ +R+ + H L
Sbjct: 145 TPWLS----------SSSRANGNAGCSNPTRRHLPLPPPVDTTSPTNANHANHGVPVPLL 194
Query: 201 NAERLQLSLRKSLVFFAQLTAKFPLIIVLILIILYAIPASAAILALYILITIVFAIPSCL 260
NAER+Q SLRKSL F LTAKFPL+ + +LI+LYAIPASAA+L LYILIT++FA+PS L
Sbjct: 195 NAERVQASLRKSLSFLVHLTAKFPLVFIFLLIVLYAIPASAAVLLLYILITVLFALPSFL 254
Query: 261 VLYFALPILDWLVREIIA 278
+LYFA P LDWLVREI A
Sbjct: 255 ILYFAYPSLDWLVREIFA 272
>gi|194696566|gb|ACF82367.1| unknown [Zea mays]
gi|223942941|gb|ACN25554.1| unknown [Zea mays]
gi|414867298|tpg|DAA45855.1| TPA: putative RING zinc finger domain superfamily protein isoform 1
[Zea mays]
gi|414867299|tpg|DAA45856.1| TPA: putative RING zinc finger domain superfamily protein isoform 2
[Zea mays]
Length = 270
Score = 297 bits (761), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 152/265 (57%), Positives = 190/265 (71%), Gaps = 20/265 (7%)
Query: 25 KNDALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVL 84
K + + S+ SDD+AS SREEGLECPICWESFN+VEN+PY LWCGHT+CKNC+L
Sbjct: 15 KRSSPNRTSSSAAYSDDEASSCTSREEGLECPICWESFNIVENVPYALWCGHTMCKNCIL 74
Query: 85 GLQRAVIRLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVESMNGDRSK 144
GLQ AVI++PT+P QLPFFI CPWCN++S R++ KGNL FP+KNY+LLWMVE MNG+R++
Sbjct: 75 GLQWAVIKVPTVPIQLPFFICCPWCNLLSPRVLYKGNLTFPRKNYFLLWMVEGMNGERAR 134
Query: 145 SNPHFRGD-HQPASSLNRNSAVRNQVSHAHNGRATCSHVSRQ---------SEIRRDEGR 194
S P R + H P L+ +S+V NG A CS+ +R+ S +
Sbjct: 135 SRPAIRSEQHTPW--LSSSSSVA-------NGNAGCSNPTRRHLPPPSVDTSPTNANHAN 185
Query: 195 FLTGH-LNAERLQLSLRKSLVFFAQLTAKFPLIIVLILIILYAIPASAAILALYILITIV 253
+ LNA R+Q SLRKSL F LTAKFPL+ V +LI+LYAIPASAA+L LYILIT++
Sbjct: 186 YGGSPLLNAGRVQASLRKSLSFLVHLTAKFPLVFVFLLIVLYAIPASAAVLLLYILITVL 245
Query: 254 FAIPSCLVLYFALPILDWLVREIIA 278
FA+PS L+LYFA P LDWLVREI A
Sbjct: 246 FALPSFLILYFAYPSLDWLVREIFA 270
>gi|226505174|ref|NP_001147578.1| RING zinc finger protein-like [Zea mays]
gi|195612290|gb|ACG27975.1| RING zinc finger protein-like [Zea mays]
Length = 270
Score = 296 bits (758), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 152/255 (59%), Positives = 186/255 (72%), Gaps = 20/255 (7%)
Query: 35 SSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLP 94
S+ SDD+AS SREEGLECPICWESFN+VEN+PY LWCGHT+CKNC+LGLQ AVI++P
Sbjct: 25 SAAYSDDEASSCTSREEGLECPICWESFNIVENVPYALWCGHTMCKNCILGLQWAVIKVP 84
Query: 95 TLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVESMNGDRSKSNPHFRGD-H 153
T+P QLPFFI CPWCN++S R++ KGNL FP+KNY+LLWMVE MNG+R++S P R + H
Sbjct: 85 TVPIQLPFFICCPWCNLLSPRVLYKGNLTFPRKNYFLLWMVEGMNGERARSRPAIRSEQH 144
Query: 154 QPASSLNRNSAVRNQVSHAHNGRATCSHVSRQS--EIRRDEGRFLTGH--------LNAE 203
P L+ +S+V NG A CS+ +R+ D H LNA
Sbjct: 145 TPW--LSSSSSVA-------NGNAGCSNPTRRHLPPPSVDTSPTNANHANHGGSPLLNAG 195
Query: 204 RLQLSLRKSLVFFAQLTAKFPLIIVLILIILYAIPASAAILALYILITIVFAIPSCLVLY 263
R+Q SLRKSL F LTAKFPL+ V +LI+LYAIPASAA+L LYILIT++FA+PS L+LY
Sbjct: 196 RVQASLRKSLSFLVHLTAKFPLVFVFLLIVLYAIPASAAVLLLYILITVLFALPSFLILY 255
Query: 264 FALPILDWLVREIIA 278
FA P LDWLVREI A
Sbjct: 256 FAYPSLDWLVREIFA 270
>gi|255570218|ref|XP_002526069.1| ubiquitin-protein ligase, putative [Ricinus communis]
gi|223534566|gb|EEF36263.1| ubiquitin-protein ligase, putative [Ricinus communis]
Length = 264
Score = 295 bits (755), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 160/263 (60%), Positives = 195/263 (74%), Gaps = 9/263 (3%)
Query: 18 ISGAIRLKNDALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHT 77
I+G++ + N + K +Q + E SDD+AS SREEGLECPICWESFN+VEN+PYVLWCGHT
Sbjct: 9 IAGSVGV-NSSPKLTQAALESSDDEASSVVSREEGLECPICWESFNIVENVPYVLWCGHT 67
Query: 78 LCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVES 137
LCKNC+LGLQ AV++ PTLP QLP FI+CPWCN++S RL+ +GNLKFP+KNY+LLWMVES
Sbjct: 68 LCKNCILGLQWAVVKFPTLPIQLPLFISCPWCNLLSFRLVYRGNLKFPRKNYFLLWMVES 127
Query: 138 MNGDRSKSNPHFRGDHQPASSLNRNSAVRNQVSHAHNGRATCSHVSRQSEIRRDE--GRF 195
N D K DHQP S + N + NQ+S ++ R H S S + D G
Sbjct: 128 KNEDGHKCQNTLYEDHQPLWSSDNNLSSGNQLSRSNIRR---EHHSEPSGVNHDHNNGNI 184
Query: 196 LTGHLNAERLQLSLRKSLVFFAQLTAKFPLIIVLILIILYAIPASAAILALYILITIVFA 255
L LN R+ SL+KSLVFF LTAKFPL+I+ +LIILYAIPASAAILALYILIT++FA
Sbjct: 185 L---LNMGRIHSSLQKSLVFFVHLTAKFPLVIIFLLIILYAIPASAAILALYILITVLFA 241
Query: 256 IPSCLVLYFALPILDWLVREIIA 278
+PS L+LYFA P LDWL REII
Sbjct: 242 LPSFLILYFAYPSLDWLFREIIT 264
>gi|125544396|gb|EAY90535.1| hypothetical protein OsI_12137 [Oryza sativa Indica Group]
Length = 267
Score = 294 bits (753), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 143/244 (58%), Positives = 180/244 (73%), Gaps = 1/244 (0%)
Query: 35 SSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLP 94
+ + SDD+AS SREEGLECPICWESFN+VEN+PYVLWCGHT+CKNC+LGLQ A+I++P
Sbjct: 25 NGDCSDDEASSCTSREEGLECPICWESFNIVENVPYVLWCGHTMCKNCILGLQWAIIKVP 84
Query: 95 TLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVESMNGDRSKSNPHFRGDHQ 154
T+P QLPFF++CPWCN++SLR+I KGNL FP+KNY+LLWMVE MNG+R++S + Q
Sbjct: 85 TVPIQLPFFVSCPWCNLLSLRIIYKGNLAFPRKNYFLLWMVEGMNGERARSRSAIHSEQQ 144
Query: 155 PASSLNRNSAVRNQVSHAHNGRATCSHVSRQSEIRRDEGRFLTGHLNAERLQLSLRKSLV 214
+ + A N+ R V QS + LNAER+Q SLRKSL
Sbjct: 145 TTWLSSSSRASGNEGYSNPIRRPLPPPVETQSP-SVNHANHGVPILNAERVQASLRKSLS 203
Query: 215 FFAQLTAKFPLIIVLILIILYAIPASAAILALYILITIVFAIPSCLVLYFALPILDWLVR 274
F LTAKFPL+ + +LI+LYAIPASAA++ LYILIT++FA+PS L+LYFA P LDWLVR
Sbjct: 204 FLVHLTAKFPLVFIFLLIVLYAIPASAAVMLLYILITVLFALPSFLILYFAYPSLDWLVR 263
Query: 275 EIIA 278
EI A
Sbjct: 264 EIFA 267
>gi|242041809|ref|XP_002468299.1| hypothetical protein SORBIDRAFT_01g043230 [Sorghum bicolor]
gi|241922153|gb|EER95297.1| hypothetical protein SORBIDRAFT_01g043230 [Sorghum bicolor]
Length = 261
Score = 293 bits (749), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 146/267 (54%), Positives = 191/267 (71%), Gaps = 8/267 (2%)
Query: 12 SLPVTAISGAIRLKNDALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYV 71
S AI+G+++ K K S + + SDD+ S SREEGL+CPICWESFN+VEN+PYV
Sbjct: 3 SFASNAIAGSLKKKGQPSKCSISNPDCSDDEVSSCTSREEGLDCPICWESFNLVENVPYV 62
Query: 72 LWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYL 131
LWCGHT+CKNC+LGL AV++ P+LP QLP FI+CPWCN++S RL+ KGNL+FP+KNY+L
Sbjct: 63 LWCGHTMCKNCILGLHWAVVKFPSLPIQLPLFISCPWCNLLSFRLVYKGNLRFPRKNYFL 122
Query: 132 LWMVESMNGDRSKSNPHFRGDHQPASSLNRNSAVRNQVSHAHNGRATCSHVSRQSEIRRD 191
LWMVESMNG+R+K + +H+ S +SA N SH H AT V +S R
Sbjct: 123 LWMVESMNGERAKFH---SSNHEEHHSSWHSSAGTNS-SHQHRRNAT---VRSESSSAR- 174
Query: 192 EGRFLTGHLNAERLQLSLRKSLVFFAQLTAKFPLIIVLILIILYAIPASAAILALYILIT 251
E + + + + SL+K +V F QLTAKFPL+I+ +LI+LYA+PASAA+L LY L+T
Sbjct: 175 ETSVVGNIFHTDNISASLQKLMVCFMQLTAKFPLVIIFLLIVLYAVPASAAVLVLYALVT 234
Query: 252 IVFAIPSCLVLYFALPILDWLVREIIA 278
+FA+PS L+LYFA P LDWLVREI A
Sbjct: 235 FLFALPSFLILYFAYPSLDWLVREIFA 261
>gi|11994767|dbj|BAB03123.1| RING zinc finger protein-like [Arabidopsis thaliana]
Length = 255
Score = 293 bits (749), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 142/268 (52%), Positives = 186/268 (69%), Gaps = 16/268 (5%)
Query: 12 SLPVTAISGAIRLKNDALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYV 71
+L + ++G I KND +P +E SDDD S S++EGLECPICWESFN+VEN+PYV
Sbjct: 3 NLASSYLTGNIGPKNDIRRPVHAHAECSDDDVSSVGSKDEGLECPICWESFNIVENVPYV 62
Query: 72 LWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYL 131
LWCGHT+CKNC+LGLQ A+++LPT P QLP FI+CPWCN++S RL+ +G L+FP KNY++
Sbjct: 63 LWCGHTMCKNCILGLQWAIVKLPTHPVQLPLFISCPWCNLLSFRLVFRGTLRFPHKNYFV 122
Query: 132 LWMVESMNGDRSKSNPHFRGDHQPASSLNRNSAVRNQVSHAHNGRATCSHVSRQSEIRRD 191
LWMVE MNG+R S + D H + C H +R + +
Sbjct: 123 LWMVERMNGERRNSPGGAQTD--------------GNNDHTRETPSPCLH-NRHHRSQPE 167
Query: 192 EGRFLTGH-LNAERLQLSLRKSLVFFAQLTAKFPLIIVLILIILYAIPASAAILALYILI 250
R + H + + +Q SLRKSLVFF QLTAKFPL+++ +LIILYAIP SAAILA+YIL+
Sbjct: 168 PSRSVNDHRIPRDNIQTSLRKSLVFFVQLTAKFPLVVIFLLIILYAIPTSAAILAMYILV 227
Query: 251 TIVFAIPSCLVLYFALPILDWLVREIIA 278
T++ A+PS L+LYFA P LDWLVREI+
Sbjct: 228 TLLLALPSFLILYFAYPCLDWLVREIVT 255
>gi|326517589|dbj|BAK03713.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 259
Score = 293 bits (749), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 146/270 (54%), Positives = 188/270 (69%), Gaps = 18/270 (6%)
Query: 12 SLPVTAISGAIRLKNDALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYV 71
S AI+G+I+ K K S + + SDDD S SREEGLECPIC ESFN+VEN+PYV
Sbjct: 3 SFASNAIAGSIKKKAQPSKGSLSNPDCSDDDGSSCASREEGLECPICCESFNIVENIPYV 62
Query: 72 LWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYL 131
LWCGHT+CKNC+LGLQ AV++ PTLP QLP FI+CPWCN++S RL+ KGNLKFP+KNY+L
Sbjct: 63 LWCGHTMCKNCILGLQWAVVKFPTLPIQLPLFISCPWCNLLSFRLVYKGNLKFPRKNYFL 122
Query: 132 LWMVESMNGDRSKSNPHFRGDHQPASSLNRNSAVRNQVSHAHNGRATCSHVSR----QSE 187
LWMVE+MNG+R+K HF G + R V + G ++ H R ++E
Sbjct: 123 LWMVETMNGERAKF--HFSGHEE-----------RQSVCPSSGGTSSSQHHRRAPTARAE 169
Query: 188 IRRDEGRFLTGHLNAERLQLSLRKSLVFFAQLTAKFPLIIVLILIILYAIPASAAILALY 247
R G+ + +SL+K +V F QLTAKFPL+I+ +LI+LYA+PASAA+L LY
Sbjct: 170 TSSARDRNAAGN-TSNTASVSLQKLMVCFVQLTAKFPLVIMFLLIVLYAVPASAAVLLLY 228
Query: 248 ILITIVFAIPSCLVLYFALPILDWLVREII 277
+L+T +FA+PS L+LYFA P LDWLVREI
Sbjct: 229 VLVTFLFALPSFLILYFAYPTLDWLVREIF 258
>gi|15228658|ref|NP_189573.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|42572561|ref|NP_974376.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|27754358|gb|AAO22628.1| unknown protein [Arabidopsis thaliana]
gi|28394061|gb|AAO42438.1| unknown protein [Arabidopsis thaliana]
gi|70905103|gb|AAZ14077.1| At3g29270 [Arabidopsis thaliana]
gi|110739433|dbj|BAF01626.1| hypothetical protein [Arabidopsis thaliana]
gi|332644039|gb|AEE77560.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|332644040|gb|AEE77561.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 263
Score = 293 bits (749), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 142/268 (52%), Positives = 186/268 (69%), Gaps = 16/268 (5%)
Query: 12 SLPVTAISGAIRLKNDALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYV 71
+L + ++G I KND +P +E SDDD S S++EGLECPICWESFN+VEN+PYV
Sbjct: 11 NLASSYLTGNIGPKNDIRRPVHAHAECSDDDVSSVGSKDEGLECPICWESFNIVENVPYV 70
Query: 72 LWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYL 131
LWCGHT+CKNC+LGLQ A+++LPT P QLP FI+CPWCN++S RL+ +G L+FP KNY++
Sbjct: 71 LWCGHTMCKNCILGLQWAIVKLPTHPVQLPLFISCPWCNLLSFRLVFRGTLRFPHKNYFV 130
Query: 132 LWMVESMNGDRSKSNPHFRGDHQPASSLNRNSAVRNQVSHAHNGRATCSHVSRQSEIRRD 191
LWMVE MNG+R S + D H + C H +R + +
Sbjct: 131 LWMVERMNGERRNSPGGAQTD--------------GNNDHTRETPSPCLH-NRHHRSQPE 175
Query: 192 EGRFLTGH-LNAERLQLSLRKSLVFFAQLTAKFPLIIVLILIILYAIPASAAILALYILI 250
R + H + + +Q SLRKSLVFF QLTAKFPL+++ +LIILYAIP SAAILA+YIL+
Sbjct: 176 PSRSVNDHRIPRDNIQTSLRKSLVFFVQLTAKFPLVVIFLLIILYAIPTSAAILAMYILV 235
Query: 251 TIVFAIPSCLVLYFALPILDWLVREIIA 278
T++ A+PS L+LYFA P LDWLVREI+
Sbjct: 236 TLLLALPSFLILYFAYPCLDWLVREIVT 263
>gi|115453623|ref|NP_001050412.1| Os03g0427100 [Oryza sativa Japonica Group]
gi|37718893|gb|AAR01764.1| expressed protein [Oryza sativa Japonica Group]
gi|108708932|gb|ABF96727.1| RING zinc finger protein, putative, expressed [Oryza sativa
Japonica Group]
gi|108708933|gb|ABF96728.1| RING zinc finger protein, putative, expressed [Oryza sativa
Japonica Group]
gi|113548883|dbj|BAF12326.1| Os03g0427100 [Oryza sativa Japonica Group]
gi|125586735|gb|EAZ27399.1| hypothetical protein OsJ_11347 [Oryza sativa Japonica Group]
gi|215767048|dbj|BAG99276.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 267
Score = 292 bits (747), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 143/244 (58%), Positives = 179/244 (73%), Gaps = 1/244 (0%)
Query: 35 SSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLP 94
+ + SDD+AS SREEGLECPICWESFN+VEN+PYVLWCGHT+CKNC+LGLQ A+I++P
Sbjct: 25 NGDCSDDEASSCTSREEGLECPICWESFNIVENVPYVLWCGHTMCKNCILGLQWAIIKVP 84
Query: 95 TLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVESMNGDRSKSNPHFRGDHQ 154
T+P QLPFF++CPWCN++SLR+I KGNL FP+KNY+LLWMVE MNG+R++S + Q
Sbjct: 85 TVPIQLPFFVSCPWCNLLSLRIIYKGNLAFPRKNYFLLWMVEGMNGERARSRSAIHSEQQ 144
Query: 155 PASSLNRNSAVRNQVSHAHNGRATCSHVSRQSEIRRDEGRFLTGHLNAERLQLSLRKSLV 214
+ + A N+ R V QS + LNAER+Q LRKSL
Sbjct: 145 TTWLSSSSRASGNEGYSNPIRRPLPPPVETQSP-SVNHANHGVPILNAERVQALLRKSLS 203
Query: 215 FFAQLTAKFPLIIVLILIILYAIPASAAILALYILITIVFAIPSCLVLYFALPILDWLVR 274
F LTAKFPL+ + +LI+LYAIPASAA+L LYILIT++FA+PS L+LYFA P LDWLVR
Sbjct: 204 FLVHLTAKFPLVFIFLLIVLYAIPASAAVLLLYILITVLFALPSFLILYFAYPSLDWLVR 263
Query: 275 EIIA 278
EI A
Sbjct: 264 EIFA 267
>gi|297815246|ref|XP_002875506.1| hypothetical protein ARALYDRAFT_484697 [Arabidopsis lyrata subsp.
lyrata]
gi|297321344|gb|EFH51765.1| hypothetical protein ARALYDRAFT_484697 [Arabidopsis lyrata subsp.
lyrata]
Length = 255
Score = 291 bits (744), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 143/268 (53%), Positives = 188/268 (70%), Gaps = 16/268 (5%)
Query: 12 SLPVTAISGAIRLKNDALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYV 71
+L + ++G I KN+ +P +E SDDD S S++EGLECPICWESFN+VEN+PYV
Sbjct: 3 NLASSYLTGNIGPKNEIRRPVHAHAECSDDDVSSVGSKDEGLECPICWESFNIVENVPYV 62
Query: 72 LWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYL 131
LWCGHT+CKNC+LGLQ A+++LPT P QLP FI+CPWCN++S RL+ +G L+FP KNY++
Sbjct: 63 LWCGHTMCKNCILGLQWAIVKLPTHPVQLPLFISCPWCNLLSFRLVFRGTLRFPHKNYFV 122
Query: 132 LWMVESMNGDRSKSNPHFRGDHQPASSLNRNSAVRNQVSHAHNGRATCSHVSRQSEIRRD 191
LWMVE MNG+R S + D N+ R S + R CS + +
Sbjct: 123 LWMVERMNGERRNSPVIAQND-------GNNNHTRETPSPCLHNRHHCS--------QPE 167
Query: 192 EGRFLTGH-LNAERLQLSLRKSLVFFAQLTAKFPLIIVLILIILYAIPASAAILALYILI 250
R + H + + +Q SLRKSLVFF QLTAKFPL+++ +LIILYAIP SAAILA+YIL+
Sbjct: 168 PSRSVNDHRIPRDNIQTSLRKSLVFFVQLTAKFPLVVIFLLIILYAIPTSAAILAMYILV 227
Query: 251 TIVFAIPSCLVLYFALPILDWLVREIIA 278
T++ A+PS L+LYFA P LDWLVREI+
Sbjct: 228 TLLLALPSFLILYFAYPCLDWLVREIVT 255
>gi|238014540|gb|ACR38305.1| unknown [Zea mays]
gi|413956604|gb|AFW89253.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 261
Score = 288 bits (738), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 143/267 (53%), Positives = 186/267 (69%), Gaps = 8/267 (2%)
Query: 12 SLPVTAISGAIRLKNDALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYV 71
S AI+G+++ K K S +++ SDD+ S SREEGL+CPICWESFN+VEN+PYV
Sbjct: 3 SFASNAIAGSLKKKAQPSKCSISNADYSDDEVSSCTSREEGLDCPICWESFNLVENVPYV 62
Query: 72 LWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYL 131
LWCGHT+CKNC+LGL AV++ P+LP QLP FI+CPWCN++S RL+ KGNL+FP+KNY+L
Sbjct: 63 LWCGHTMCKNCILGLHWAVVKFPSLPIQLPLFISCPWCNLLSFRLVYKGNLRFPRKNYFL 122
Query: 132 LWMVESMNGDRSKSNPHFRGDHQPASSLNRNSAVRNQVSHAHNGRATCSHVSRQSEIRRD 191
LWMVESMNG R+K + +H S +SA + A S S E
Sbjct: 123 LWMVESMNGGRAKFH---STNHDEHHSTWHSSAGTSSSHQQRRNAAVGSESSSGRETGVG 179
Query: 192 EGRFLTGHLNAERLQLSLRKSLVFFAQLTAKFPLIIVLILIILYAIPASAAILALYILIT 251
F T +++A SL+K +V F QLTAKFPL+I+ +LI+LYA+PASAA+L LY L+T
Sbjct: 180 RNIFHTDNISA-----SLQKLMVCFMQLTAKFPLVIIFLLIVLYAVPASAAVLVLYALVT 234
Query: 252 IVFAIPSCLVLYFALPILDWLVREIIA 278
+FA+PS L+LYFA P LDWLVREI A
Sbjct: 235 FLFALPSFLILYFAYPSLDWLVREIFA 261
>gi|294461951|gb|ADE76531.1| unknown [Picea sitchensis]
Length = 260
Score = 286 bits (732), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 148/270 (54%), Positives = 184/270 (68%), Gaps = 15/270 (5%)
Query: 12 SLPVTAISGAIRLKNDALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYV 71
S AISG + K + +S SDD+AS S EE LECPICWESFN+VEN+PYV
Sbjct: 3 SFASNAISGTMGFKG------RQASVCSDDEASSRKSAEEKLECPICWESFNIVENVPYV 56
Query: 72 LWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYL 131
LWCGHTLCKNCVLGLQ A ++ PTLP QLP FI+CPWC ++S RL+ KG+LKFP+KN++L
Sbjct: 57 LWCGHTLCKNCVLGLQWATVKFPTLPVQLPLFISCPWCQLLSFRLVWKGSLKFPRKNFFL 116
Query: 132 LWMVESMNGDRSKSNPHFRGDHQ---PASSLNRNSAVRNQVSHAHNGRATCSHVSRQSEI 188
LWMVESMN +R + + GD + L+ SA +H C+HV S+
Sbjct: 117 LWMVESMNDER-RLHGSIGGDQGVLPTNAGLDSGSASILSANH-----RPCAHVDHPSQR 170
Query: 189 RRDEGRFLTGHLNAERLQLSLRKSLVFFAQLTAKFPLIIVLILIILYAIPASAAILALYI 248
+ ++NA L S RKSLV F Q+TAKFPL+I+ +LI+LY IPASAAILALY
Sbjct: 171 SNGIMDVVHNYMNANMLHASFRKSLVIFVQMTAKFPLVIIFLLIVLYVIPASAAILALYC 230
Query: 249 LITIVFAIPSCLVLYFALPILDWLVREIIA 278
LITI+FA+PS L+LYFA P LDWLVREI+
Sbjct: 231 LITILFALPSFLILYFAYPSLDWLVREIVT 260
>gi|226507657|ref|NP_001149802.1| RING zinc finger protein-like [Zea mays]
gi|195634763|gb|ACG36850.1| RING zinc finger protein-like [Zea mays]
Length = 261
Score = 284 bits (727), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 147/277 (53%), Positives = 193/277 (69%), Gaps = 28/277 (10%)
Query: 12 SLPVTAISGAIRLKNDALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYV 71
S AI+G+++ K K S +++ SDD+ S SREEGL+CPICWESFN+VEN+PYV
Sbjct: 3 SFASNAIAGSLKKKAQPSKCSISNADYSDDEVSSCTSREEGLDCPICWESFNLVENVPYV 62
Query: 72 LWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYL 131
LWCGHT+CKNC+LGL AV++ P+LP QLP FI+CPWCN++S RL+ KGNL+FP+KNY+L
Sbjct: 63 LWCGHTMCKNCILGLHWAVVKFPSLPIQLPLFISCPWCNLLSFRLVYKGNLRFPRKNYFL 122
Query: 132 LWMVESMNGDRSKSNPHF------RGDHQPASS----LNRNSAVRNQVSHAHNGRATCSH 181
LWMVESMNG R S P RG PA + RN+AV ++ S
Sbjct: 123 LWMVESMNGGRQNSIPLTMTSIIPRGIQVPAQAPSHQQRRNAAVGSESSSG--------- 173
Query: 182 VSRQSEIRRDEGRFLTGHLNAERLQLSLRKSLVFFAQLTAKFPLIIVLILIILYAIPASA 241
R++ + R+ F T +++A SL+K +V F QLTAKFPL+I+ +LI+LYA+PASA
Sbjct: 174 --RETGVGRN--IFHTDNISA-----SLQKLMVCFMQLTAKFPLVIIFLLIVLYAVPASA 224
Query: 242 AILALYILITIVFAIPSCLVLYFALPILDWLVREIIA 278
A+L LY L+T +FA+PS L+LYFA P LDWLVREI A
Sbjct: 225 AVLVLYALVTFLFALPSFLILYFAYPSLDWLVREIFA 261
>gi|356494910|ref|XP_003516324.1| PREDICTED: uncharacterized protein LOC100796991 [Glycine max]
Length = 262
Score = 278 bits (712), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 143/258 (55%), Positives = 183/258 (70%), Gaps = 7/258 (2%)
Query: 21 AIRLKNDALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCK 80
+IRLK + +PSQ S+E SDD+ N SR+EGLECPICWESFN+VEN+PYVLWCGHTLCK
Sbjct: 12 SIRLKIGSKQPSQTSAECSDDEVCSNASRDEGLECPICWESFNIVENVPYVLWCGHTLCK 71
Query: 81 NCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVESMNG 140
NCVLGLQ AV++ PT ++PFFI+CPWC+++S R+ICKGNLK+P KN++LLWMVES+NG
Sbjct: 72 NCVLGLQWAVVKFPTQQIKIPFFISCPWCHLLSFRIICKGNLKYPCKNFFLLWMVESLNG 131
Query: 141 DRSKSNPHFRGDHQPASSLNRNSAVRNQVSHAHNGRATCSHVSRQSEIRRDEGRFLTGHL 200
DR+K D+QP S N + +QV++ + RA+ S SR D G
Sbjct: 132 DRNKLVSTCT-DNQPIWSPKCN-LLGSQVTNCNLRRASVSPCSRLLGSNHD-----VGVN 184
Query: 201 NAERLQLSLRKSLVFFAQLTAKFPLIIVLILIILYAIPASAAILALYILITIVFAIPSCL 260
+ E SL KSL FF T+KFPL+++ +LI L+ IP A IL LY L+TI+FAIPS L
Sbjct: 185 DGETHHFSLHKSLDFFLHFTSKFPLVVIFLLIALFLIPCCAVILVLYFLVTILFAIPSFL 244
Query: 261 VLYFALPILDWLVREIIA 278
VLYFA P + LVREI +
Sbjct: 245 VLYFAYPTIQRLVREITS 262
>gi|115451489|ref|NP_001049345.1| Os03g0211100 [Oryza sativa Japonica Group]
gi|108706802|gb|ABF94597.1| RING zinc finger protein, putative, expressed [Oryza sativa
Japonica Group]
gi|113547816|dbj|BAF11259.1| Os03g0211100 [Oryza sativa Japonica Group]
gi|125542868|gb|EAY89007.1| hypothetical protein OsI_10489 [Oryza sativa Indica Group]
gi|125585363|gb|EAZ26027.1| hypothetical protein OsJ_09880 [Oryza sativa Japonica Group]
gi|215767247|dbj|BAG99475.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767261|dbj|BAG99489.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 260
Score = 276 bits (705), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 146/270 (54%), Positives = 192/270 (71%), Gaps = 17/270 (6%)
Query: 12 SLPVTAISGAIRLKNDALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYV 71
S AI+G+IR K K SQ + + SDDD S SREEGLECPICWESFN+VEN+PYV
Sbjct: 3 SFASNAIAGSIRKKAQPSKCSQSNPDCSDDDVSSCASREEGLECPICWESFNLVENVPYV 62
Query: 72 LWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYL 131
LWCGHT+CKNC+LGLQ AV++ PTLP QLP FI+CPWCN++S RL+ KGNLKFP+KNY+L
Sbjct: 63 LWCGHTMCKNCILGLQWAVVKFPTLPIQLPLFISCPWCNLLSFRLVYKGNLKFPRKNYFL 122
Query: 132 LWMVESMNGDRSKSNPHFRGDHQPASSLNRNSAVRNQVSHAHNGRATCSHVSR---QSEI 188
LWMVESMNG+R+K H P+ R+ + + G ++ H R ++E
Sbjct: 123 LWMVESMNGERAKF-------HSPSHE------ERHSLCPSGGGPSSSQHHRRPAPRTES 169
Query: 189 RRDEGRFLTGHL-NAERLQLSLRKSLVFFAQLTAKFPLIIVLILIILYAIPASAAILALY 247
R + G++ N + SL+K ++ F Q+TAKFPL+I+ +LI+LYA+PAS A+L LY
Sbjct: 170 ASGRERSVAGNVFNTYSISASLQKIMLSFVQMTAKFPLVIIFLLIVLYAVPASVAVLVLY 229
Query: 248 ILITIVFAIPSCLVLYFALPILDWLVREII 277
+L+T++FA+PS L+LYFA P LDWLVREI
Sbjct: 230 VLVTVLFALPSFLILYFAYPSLDWLVREIF 259
>gi|356499871|ref|XP_003518759.1| PREDICTED: uncharacterized protein LOC100499984 [Glycine max]
Length = 262
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 141/262 (53%), Positives = 184/262 (70%), Gaps = 15/262 (5%)
Query: 21 AIRLKNDALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCK 80
+I LK + +PSQ S+E SDD+ N SR+EGLECPICWESFN+VEN+PYVLWCGHTLCK
Sbjct: 12 SIGLKRGSKQPSQTSAECSDDEVCSNASRDEGLECPICWESFNIVENVPYVLWCGHTLCK 71
Query: 81 NCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVESMNG 140
NC+LGLQ AV++ PT ++PFFI+CPWC+++S R+I KGNLK+P KN++LLWMVES+NG
Sbjct: 72 NCILGLQWAVVKFPTQQIKIPFFISCPWCHLLSFRIIYKGNLKYPCKNFFLLWMVESLNG 131
Query: 141 DRSKSNPHFRGDHQPASSLNRNSAVRNQVSHAHNGRATCSHVSR----QSEIRRDEGRFL 196
DR K D+QP S N + +QV++ + RA+ S SR ++R ++G
Sbjct: 132 DRHKVFSTCT-DNQPIWSPKCN-LLGSQVTNCNLRRASVSPCSRLLGSNRDVRDNDG--- 186
Query: 197 TGHLNAERLQLSLRKSLVFFAQLTAKFPLIIVLILIILYAIPASAAILALYILITIVFAI 256
E SL KSL FF T+KFPL+++ +LI L+ +P SA IL LY L+TIVFAI
Sbjct: 187 ------ETHHFSLHKSLDFFLHFTSKFPLVVIFLLIALFLVPCSAVILVLYFLVTIVFAI 240
Query: 257 PSCLVLYFALPILDWLVREIIA 278
PS LVLYFA P + LVREI +
Sbjct: 241 PSFLVLYFAYPTIQRLVREITS 262
>gi|255635754|gb|ACU18226.1| unknown [Glycine max]
Length = 262
Score = 274 bits (701), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 142/258 (55%), Positives = 182/258 (70%), Gaps = 7/258 (2%)
Query: 21 AIRLKNDALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCK 80
+IRLK + +PSQ S+E SDD+ N SR+EGLECPICWESFN+VEN+PYVLWCGHTLCK
Sbjct: 12 SIRLKIGSKQPSQTSAECSDDEVCSNASRDEGLECPICWESFNIVENVPYVLWCGHTLCK 71
Query: 81 NCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVESMNG 140
N VLGLQ AV++ PT ++PFFI+CPWC+++S R+ICKGNLK+P KN++LLWMVES+NG
Sbjct: 72 NWVLGLQWAVVKFPTQQIKIPFFISCPWCHLLSFRIICKGNLKYPCKNFFLLWMVESLNG 131
Query: 141 DRSKSNPHFRGDHQPASSLNRNSAVRNQVSHAHNGRATCSHVSRQSEIRRDEGRFLTGHL 200
DR+K D+QP S N + +QV++ + RA+ S SR D G
Sbjct: 132 DRNKLVSTCT-DNQPIWSPKCN-LLGSQVTNCNLRRASVSPCSRLLGSNHD-----VGVN 184
Query: 201 NAERLQLSLRKSLVFFAQLTAKFPLIIVLILIILYAIPASAAILALYILITIVFAIPSCL 260
+ E SL KSL FF T+KFPL+++ +LI L+ IP A IL LY L+TI+FAIPS L
Sbjct: 185 DGETHHFSLHKSLDFFLHFTSKFPLVVIFLLIALFLIPCCAVILVLYFLVTILFAIPSFL 244
Query: 261 VLYFALPILDWLVREIIA 278
VLYFA P + LVREI +
Sbjct: 245 VLYFAYPTIQRLVREITS 262
>gi|297841667|ref|XP_002888715.1| hypothetical protein ARALYDRAFT_476060 [Arabidopsis lyrata subsp.
lyrata]
gi|297334556|gb|EFH64974.1| hypothetical protein ARALYDRAFT_476060 [Arabidopsis lyrata subsp.
lyrata]
Length = 264
Score = 263 bits (672), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 128/262 (48%), Positives = 177/262 (67%), Gaps = 11/262 (4%)
Query: 20 GAIRLKNDALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLC 79
G++ LK P+Q SS+ SDD+ S + EEGLECPICWESFN+VEN+PYVLWCGHTLC
Sbjct: 10 GSMGLKKSPKDPAQASSQCSDDEVSNVSRDEEGLECPICWESFNIVENVPYVLWCGHTLC 69
Query: 80 KNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVESMN 139
+NCV GLQ AV+RL + ++PFF++CPWC ++S R++ KGNLKFP+KN++LLWMVES+N
Sbjct: 70 QNCVFGLQSAVLRLSSQDIRIPFFVSCPWCQLLSFRIVYKGNLKFPRKNFFLLWMVESLN 129
Query: 140 GDRSKSNPHFRGDHQPASSLNRNSAVRNQVSHAHNGRATCSHVSRQSEIRRDEGRFLTGH 199
GDR+ H S N+ S + S + +++ +++ + +R L H
Sbjct: 130 GDRTS--------HASLVSDNQQSVPTPRCSMSLGNQSSNNNLIARPLLRNQSTELLPHH 181
Query: 200 LNA---ERLQLSLRKSLVFFAQLTAKFPLIIVLILIILYAIPASAAILALYILITIVFAI 256
++ R S KSL FF T+KFP +I+ +LI+ +AIP S ILALY L+TI+FA+
Sbjct: 182 DHSNQPSRQHFSFHKSLDFFISFTSKFPFVIIFLLIVFFAIPGSLIILALYFLLTILFAV 241
Query: 257 PSCLVLYFALPILDWLVREIIA 278
P+ LVLYFA PIL+ LV EI +
Sbjct: 242 PAGLVLYFAYPILERLVHEITS 263
>gi|18409246|ref|NP_564959.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|12325097|gb|AAG52506.1|AC018364_24 unknown protein; 31958-32770 [Arabidopsis thaliana]
gi|12597782|gb|AAG60094.1|AC073178_5 unknown protein [Arabidopsis thaliana]
gi|19699330|gb|AAL91275.1| At1g69330/F10D13.3 [Arabidopsis thaliana]
gi|23505825|gb|AAN28772.1| At1g69330/F10D13.3 [Arabidopsis thaliana]
gi|332196791|gb|AEE34912.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 270
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 128/262 (48%), Positives = 177/262 (67%), Gaps = 5/262 (1%)
Query: 20 GAIRLKNDALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLC 79
G++ LK +Q SS+ SDD+ S + EEGLECPICWESFN+VEN+PYVLWCGHTLC
Sbjct: 10 GSMGLKKSPKDSAQASSQCSDDEVSNISRDEEGLECPICWESFNIVENVPYVLWCGHTLC 69
Query: 80 KNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVESMN 139
+NCV GLQ AV+RL + ++PFF++CPWC ++S R++ KGNLKFP+KN++LLWMVES+N
Sbjct: 70 QNCVFGLQSAVLRLSSQDIRIPFFVSCPWCQLLSFRIVYKGNLKFPRKNFFLLWMVESLN 129
Query: 140 GDRSKSNPHFRGDHQPASSLNRNSAVRNQVSHAHNGRATCSHVSRQSEIRRDEGRFLTGH 199
GDR+ R H + N+ SA + S + ++ +++ + +R L H
Sbjct: 130 GDRTSHGD--RTSHGSLVTDNQQSAPTPRCSMSLGNHSSNNNLVARPLLRNQSTDLLPHH 187
Query: 200 LNA---ERLQLSLRKSLVFFAQLTAKFPLIIVLILIILYAIPASAAILALYILITIVFAI 256
++ R S KSL FF T+KFP +I+ +LI+ +AIP S ILALY L+TI+FA+
Sbjct: 188 DHSNQPSRQLFSFHKSLDFFISFTSKFPFVIIFLLIVFFAIPGSLIILALYFLLTILFAV 247
Query: 257 PSCLVLYFALPILDWLVREIIA 278
P+ LVLYFA PIL+ LV EI +
Sbjct: 248 PAGLVLYFAYPILERLVNEITS 269
>gi|21594048|gb|AAM65966.1| unknown [Arabidopsis thaliana]
Length = 270
Score = 260 bits (665), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 128/262 (48%), Positives = 176/262 (67%), Gaps = 5/262 (1%)
Query: 20 GAIRLKNDALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLC 79
G++ LK +Q SS+ SDD+ S + EEGLECPICWESFN+VEN+PYVLWCGHTLC
Sbjct: 10 GSMGLKKSPKDSAQASSQCSDDEVSNISRDEEGLECPICWESFNIVENVPYVLWCGHTLC 69
Query: 80 KNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVESMN 139
+NCV GLQ AV+RL + ++PFF++CPWC ++S R++ KGNLKFP+KN++LLWMVES+N
Sbjct: 70 QNCVFGLQSAVLRLSSQDIRIPFFVSCPWCQLLSFRIVYKGNLKFPRKNFFLLWMVESLN 129
Query: 140 GDRSKSNPHFRGDHQPASSLNRNSAVRNQVSHAHNGRATCSHVSRQSEIRRDEGRFLTGH 199
GDR+ R H + N+ SA + S + + +++ + +R L H
Sbjct: 130 GDRTSHGD--RTSHGSLVTDNQQSAPTLRCSMSLGNHISNNNLVARPLLRNQSTDLLPHH 187
Query: 200 LNA---ERLQLSLRKSLVFFAQLTAKFPLIIVLILIILYAIPASAAILALYILITIVFAI 256
++ R S KSL FF T+KFP +I+ +LI+ +AIP S ILALY L+TI+FA+
Sbjct: 188 DHSNQPSRQLFSFHKSLDFFISFTSKFPFVIIFLLIVFFAIPGSLIILALYFLLTILFAV 247
Query: 257 PSCLVLYFALPILDWLVREIIA 278
P+ LVLYFA PIL+ LV EI +
Sbjct: 248 PAGLVLYFAYPILERLVNEITS 269
>gi|15221223|ref|NP_177577.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|12324808|gb|AAG52370.1|AC011765_22 putative RING zinc finger protein; 15305-14520 [Arabidopsis
thaliana]
gi|66865912|gb|AAY57590.1| RING finger family protein [Arabidopsis thaliana]
gi|87116604|gb|ABD19666.1| At1g74370 [Arabidopsis thaliana]
gi|110736984|dbj|BAF00447.1| putative RING zinc finger protein [Arabidopsis thaliana]
gi|332197462|gb|AEE35583.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 261
Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 131/254 (51%), Positives = 171/254 (67%), Gaps = 20/254 (7%)
Query: 28 ALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQ 87
A KP + + + S D ++EE LECPICWESFNVVEN+PYVLWCGHT+CK C+LGLQ
Sbjct: 21 ATKPRRATLDRSGDGR--KTTKEEKLECPICWESFNVVENVPYVLWCGHTICKYCLLGLQ 78
Query: 88 RA-VIRLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVESMNGDRSKSN 146
RA VI+ LPFQLPFF+ CPWCN++SLRL+C G ++FP KN+YLLWMVESMNG RS++
Sbjct: 79 RAIVIKSSALPFQLPFFVACPWCNILSLRLVCNGTIRFPSKNFYLLWMVESMNGSRSEAP 138
Query: 147 PHFRGDHQPASSLNRNSAVRNQVSHAHN----GRATCSHVSRQSEIRRDEGRFLTGHLNA 202
D++ +S R+ +RN+ N + S + + R G F TG
Sbjct: 139 ----SDNKRVASGQRD--LRNRCDGVSNTALGDEGLLDNRSWWNGVTR--GFFRTG---- 186
Query: 203 ERLQLSLRKSLVFFAQLTAKFPLIIVLILIILYAIPASAAILALYILITIVFAIPSCLVL 262
RL S+RKS+ A L AKFPL+++ +L+ LYAIP SAA+L +Y +T A+PS LVL
Sbjct: 187 -RLHDSVRKSMALVAHLLAKFPLVVIFLLMALYAIPVSAAVLGVYFFVTFALAVPSFLVL 245
Query: 263 YFALPILDWLVREI 276
YFA P L+WL+REI
Sbjct: 246 YFAFPSLNWLIREI 259
>gi|21592563|gb|AAM64512.1| putative RING zinc finger protein [Arabidopsis thaliana]
Length = 261
Score = 254 bits (648), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 131/254 (51%), Positives = 171/254 (67%), Gaps = 20/254 (7%)
Query: 28 ALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQ 87
A KP + + + S D ++EE LECPICWESFNVVEN+PYVLWCGHT+CK C+LGLQ
Sbjct: 21 ATKPRRATLDRSGDGR--KTTKEEKLECPICWESFNVVENVPYVLWCGHTICKYCLLGLQ 78
Query: 88 RA-VIRLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVESMNGDRSKSN 146
RA VI+ LPFQLPFF+ CPWCN++SLRL+C G ++FP KN+YLLWMVESMNG RS++
Sbjct: 79 RAIVIKSSALPFQLPFFVACPWCNILSLRLVCNGTIRFPSKNFYLLWMVESMNGSRSEAP 138
Query: 147 PHFRGDHQPASSLNRNSAVRNQVSHAHN----GRATCSHVSRQSEIRRDEGRFLTGHLNA 202
D++ +S R+ +RN+ N + S + + R G F TG
Sbjct: 139 ----SDNKRVASGQRD--LRNRCDGMSNTALGDEGLLDNRSWWNGVTR--GFFRTG---- 186
Query: 203 ERLQLSLRKSLVFFAQLTAKFPLIIVLILIILYAIPASAAILALYILITIVFAIPSCLVL 262
RL S+RKS+ A L AKFPL+++ +L+ LYAIP SAA+L +Y +T A+PS LVL
Sbjct: 187 -RLHDSVRKSMALVAHLLAKFPLVVIFLLMALYAIPVSAAVLGVYFFVTFALAVPSFLVL 245
Query: 263 YFALPILDWLVREI 276
YFA P L+WL+REI
Sbjct: 246 YFAFPSLNWLIREI 259
>gi|297842183|ref|XP_002888973.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297334814|gb|EFH65232.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 259
Score = 251 bits (640), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 129/268 (48%), Positives = 170/268 (63%), Gaps = 12/268 (4%)
Query: 12 SLPVTAISGAIRLKNDALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYV 71
+L +I + + + Q S ++EE LECPICWESFNVVEN+PYV
Sbjct: 3 NLASKSIREGFKSQGEEAATKQRKSPSDSSGDGRRTTKEEKLECPICWESFNVVENVPYV 62
Query: 72 LWCGHTLCKNCVLGLQRAV-IRLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYY 130
LWCGHT+CK C+LGLQRAV I+ LPFQLPFF+ CPWCN++SLRL+C G +KFP KN+Y
Sbjct: 63 LWCGHTICKYCLLGLQRAVVIKSSALPFQLPFFVACPWCNILSLRLVCSGTIKFPSKNFY 122
Query: 131 LLWMVESMNGDRSKSNPHFRGDHQPASSLNRNSAVRNQVSHAHNGRATCSHVSRQSEIRR 190
LLWMVESMNG RS++ R D++ +S + + A + + S + + R
Sbjct: 123 LLWMVESMNGCRSEA----RSDNKRVTSGHLRKRCDGVSNTASDDGGLLDNRSWWNGVTR 178
Query: 191 DEGRFLTGHLNAERLQLSLRKSLVFFAQLTAKFPLIIVLILIILYAIPASAAILALYILI 250
G F TG RL S+ KS+ A L +KFPL+++ +L+ LYAIP SAA+L LY +
Sbjct: 179 --GFFGTG-----RLHDSVCKSMALVAHLLSKFPLVVIFLLMALYAIPVSAAVLGLYFFV 231
Query: 251 TIVFAIPSCLVLYFALPILDWLVREIIA 278
T A+PS LVLYFA P L+WL+REI A
Sbjct: 232 TFALAVPSFLVLYFAFPSLNWLIREIAA 259
>gi|357487441|ref|XP_003614008.1| hypothetical protein MTR_5g043680 [Medicago truncatula]
gi|355515343|gb|AES96966.1| hypothetical protein MTR_5g043680 [Medicago truncatula]
Length = 261
Score = 251 bits (640), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 127/261 (48%), Positives = 168/261 (64%), Gaps = 13/261 (4%)
Query: 21 AIRLKNDALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCK 80
+I +K + +P +E SDD+ N S++EGLECPICWESFN+VEN+PYVLWCGHTLCK
Sbjct: 11 SIGMKRSSTEPILSCAECSDDEVCSNASKDEGLECPICWESFNIVENVPYVLWCGHTLCK 70
Query: 81 NCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVESMNG 140
NCVLGLQ AV++ PT ++PFF++CPWC+++S R I KGN+KFP+KN++LLWMVES+NG
Sbjct: 71 NCVLGLQWAVMKFPTQQIRIPFFVSCPWCHLLSFRFIYKGNMKFPRKNFFLLWMVESLNG 130
Query: 141 DRSKSNPHFRGDHQPASSLNRN---SAVRNQVSHAHNGRATCSHVSRQSEIRRDEGRFLT 197
DR K+ D QP S N S + + + +R +
Sbjct: 131 DRHKAVSA-SVDSQPIWSPKVNLLGSQGTGCSPSRSSSSHCSEQLGSNNAVRGSD----- 184
Query: 198 GHLNAERLQLSLRKSLVFFAQLTAKFPLIIVLILIILYAIPASAAILALYILITIVFAIP 257
ER SL KSL FF T+KFPL+I+ +LI + IP S IL +Y L+TI+FAIP
Sbjct: 185 ----RERHYFSLHKSLDFFLHFTSKFPLVIIFLLIAFFVIPCSIVILIIYFLLTIIFAIP 240
Query: 258 SCLVLYFALPILDWLVREIIA 278
S +VLYFA P + LVREI +
Sbjct: 241 SFIVLYFAYPTIQRLVREITS 261
>gi|224112152|ref|XP_002316100.1| predicted protein [Populus trichocarpa]
gi|222865140|gb|EEF02271.1| predicted protein [Populus trichocarpa]
Length = 264
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 125/259 (48%), Positives = 173/259 (66%), Gaps = 6/259 (2%)
Query: 21 AIRLKNDALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCK 80
+I LK + + ++ + E SDD+ N S EEGLECPICWESFN+VEN+PYVLWCGH+LC+
Sbjct: 11 SIGLKKSSREANRANLEFSDDEVCSNVSGEEGLECPICWESFNIVENVPYVLWCGHSLCE 70
Query: 81 NCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVESMNG 140
NCVLGLQ AV+ ++PFF++CPWC ++S RL+ +G+LKFP+KN++LLWMV+ +NG
Sbjct: 71 NCVLGLQCAVLGFSMQKIRIPFFVSCPWCQLLSFRLVYQGSLKFPRKNFFLLWMVQKLNG 130
Query: 141 DRSK-SNPHFRGDHQPASSLNRNSAVRNQVSHAHNGRATCSHVSRQSEIRRDEGRFLTGH 199
DR K S+ D+QP S +Q S++ RA + Q D G
Sbjct: 131 DRVKFSSSLCTNDNQPIWSPKGKIIFGHQFSNSSLSRAPYNQGQSQLGFNGD-----GGS 185
Query: 200 LNAERLQLSLRKSLVFFAQLTAKFPLIIVLILIILYAIPASAAILALYILITIVFAIPSC 259
+ ER SL KSL +F T KFPL+I+ +LI+L+ +P SA I+ LY+L+T++FA+PS
Sbjct: 186 RSGERNHSSLHKSLDYFLDFTTKFPLVIIFLLIVLFVVPISAVIVLLYLLVTVLFALPSF 245
Query: 260 LVLYFALPILDWLVREIIA 278
LVLYFA P L LV+EI +
Sbjct: 246 LVLYFAYPTLARLVKEIAS 264
>gi|190899682|gb|ACE98354.1| expressed protein [Populus tremula]
Length = 181
Score = 227 bits (579), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 111/182 (60%), Positives = 132/182 (72%), Gaps = 1/182 (0%)
Query: 33 QVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIR 92
QV SE SDD+AS SREEGLECPICWESFN+VEN+PYVLWCGHTLCKNC+LGLQ AV++
Sbjct: 1 QVPSEYSDDEASSVVSREEGLECPICWESFNIVENVPYVLWCGHTLCKNCILGLQWAVVK 60
Query: 93 LPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVESMNGDRSKSNPHFRGD 152
PTLP QLP FI+CPWCN++S RL+ +GNLKFP KNY+LLWMVES NGDR KS+ F D
Sbjct: 61 FPTLPIQLPLFISCPWCNLLSFRLVYRGNLKFPHKNYFLLWMVESKNGDREKSHGTFCED 120
Query: 153 HQPASSLNRNSAVRNQVSHAHNGRATCSHVSRQSEIRRDEGRFLTGHLNAERLQLSLRKS 212
QP S + N A+ NQ S + R H + SE D + +LN R+ SL+KS
Sbjct: 121 QQPHWSSDSNLALGNQASRGNIRRGQYVHHAEPSEANHDHNH-VNSYLNVRRIHSSLQKS 179
Query: 213 LV 214
LV
Sbjct: 180 LV 181
>gi|190899674|gb|ACE98350.1| expressed protein [Populus tremula]
Length = 181
Score = 227 bits (579), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 111/182 (60%), Positives = 133/182 (73%), Gaps = 1/182 (0%)
Query: 33 QVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIR 92
QV SE SDD+AS SREEGLECPICWESFN+VEN+PYVLWCGHTLCKNC+LGLQ AV++
Sbjct: 1 QVPSEYSDDEASSVVSREEGLECPICWESFNIVENVPYVLWCGHTLCKNCILGLQWAVVK 60
Query: 93 LPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVESMNGDRSKSNPHFRGD 152
PTLP QLP FI+CPWCN++S RL+ +GNLKFP+KNY+LLWMVES NGDR KS+ F D
Sbjct: 61 FPTLPIQLPLFISCPWCNLLSFRLVYRGNLKFPRKNYFLLWMVESKNGDREKSHGTFCED 120
Query: 153 HQPASSLNRNSAVRNQVSHAHNGRATCSHVSRQSEIRRDEGRFLTGHLNAERLQLSLRKS 212
QP S + N A+ NQ S + R H + SE D + +LN R+ SL+KS
Sbjct: 121 QQPHWSSDSNLALGNQASRGNIRRGQYVHHAEPSEANHDHNH-VNSYLNVRRIHSSLQKS 179
Query: 213 LV 214
LV
Sbjct: 180 LV 181
>gi|190899620|gb|ACE98323.1| expressed protein [Populus tremula]
gi|190899622|gb|ACE98324.1| expressed protein [Populus tremula]
gi|190899624|gb|ACE98325.1| expressed protein [Populus tremula]
gi|190899626|gb|ACE98326.1| expressed protein [Populus tremula]
gi|190899628|gb|ACE98327.1| expressed protein [Populus tremula]
gi|190899630|gb|ACE98328.1| expressed protein [Populus tremula]
gi|190899632|gb|ACE98329.1| expressed protein [Populus tremula]
gi|190899634|gb|ACE98330.1| expressed protein [Populus tremula]
gi|190899636|gb|ACE98331.1| expressed protein [Populus tremula]
gi|190899638|gb|ACE98332.1| expressed protein [Populus tremula]
gi|190899640|gb|ACE98333.1| expressed protein [Populus tremula]
gi|190899644|gb|ACE98335.1| expressed protein [Populus tremula]
gi|190899646|gb|ACE98336.1| expressed protein [Populus tremula]
gi|190899650|gb|ACE98338.1| expressed protein [Populus tremula]
gi|190899652|gb|ACE98339.1| expressed protein [Populus tremula]
gi|190899654|gb|ACE98340.1| expressed protein [Populus tremula]
gi|190899656|gb|ACE98341.1| expressed protein [Populus tremula]
gi|190899658|gb|ACE98342.1| expressed protein [Populus tremula]
gi|190899660|gb|ACE98343.1| expressed protein [Populus tremula]
gi|190899662|gb|ACE98344.1| expressed protein [Populus tremula]
gi|190899664|gb|ACE98345.1| expressed protein [Populus tremula]
gi|190899666|gb|ACE98346.1| expressed protein [Populus tremula]
gi|190899668|gb|ACE98347.1| expressed protein [Populus tremula]
gi|190899670|gb|ACE98348.1| expressed protein [Populus tremula]
gi|190899672|gb|ACE98349.1| expressed protein [Populus tremula]
gi|190899676|gb|ACE98351.1| expressed protein [Populus tremula]
gi|190899678|gb|ACE98352.1| expressed protein [Populus tremula]
gi|190899680|gb|ACE98353.1| expressed protein [Populus tremula]
gi|190899684|gb|ACE98355.1| expressed protein [Populus tremula]
gi|190899686|gb|ACE98356.1| expressed protein [Populus tremula]
Length = 181
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 110/182 (60%), Positives = 133/182 (73%), Gaps = 1/182 (0%)
Query: 33 QVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIR 92
QV SE SDD+AS SREEGLECPICWESFN+VEN+PYVLWCGHTLCKNC+LGLQ AV++
Sbjct: 1 QVPSEYSDDEASSVVSREEGLECPICWESFNIVENVPYVLWCGHTLCKNCILGLQWAVVK 60
Query: 93 LPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVESMNGDRSKSNPHFRGD 152
PTLP QLP FI+CPWCN++S RL+ +GNLKFP+KNY+LLWMVES NGDR KS+ F D
Sbjct: 61 FPTLPIQLPLFISCPWCNLLSFRLVYRGNLKFPRKNYFLLWMVESKNGDREKSHGTFCED 120
Query: 153 HQPASSLNRNSAVRNQVSHAHNGRATCSHVSRQSEIRRDEGRFLTGHLNAERLQLSLRKS 212
QP S + N A+ NQ S + R H + S+ D + +LN R+ SL+KS
Sbjct: 121 QQPHWSSDSNLALGNQASRGNIRRGQYVHHAEPSDANHDHNH-VNSYLNVRRIHSSLQKS 179
Query: 213 LV 214
LV
Sbjct: 180 LV 181
>gi|190899642|gb|ACE98334.1| expressed protein [Populus tremula]
Length = 181
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 110/182 (60%), Positives = 132/182 (72%), Gaps = 1/182 (0%)
Query: 33 QVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIR 92
QV SE SDD+AS SREEGLECPICWESFN+VEN+PYVLWCGHTLCKNC+LGLQ AV++
Sbjct: 1 QVPSEYSDDEASSVVSREEGLECPICWESFNIVENVPYVLWCGHTLCKNCILGLQWAVVK 60
Query: 93 LPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVESMNGDRSKSNPHFRGD 152
PTLP QLP FI+CPWCN++S RL+ +GNLKFP+KNY+LLWMVES NGDR KS+ F D
Sbjct: 61 FPTLPIQLPLFISCPWCNLLSFRLVYRGNLKFPRKNYFLLWMVESKNGDREKSHGTFCED 120
Query: 153 HQPASSLNRNSAVRNQVSHAHNGRATCSHVSRQSEIRRDEGRFLTGHLNAERLQLSLRKS 212
QP S + N A+ NQ S + R H + S D + +LN R+ SL+KS
Sbjct: 121 QQPHWSSDSNLALGNQASRGNIRRGQYVHHAEPSNANHDHNH-VNSYLNVRRIHSSLQKS 179
Query: 213 LV 214
LV
Sbjct: 180 LV 181
>gi|190899648|gb|ACE98337.1| expressed protein [Populus tremula]
Length = 181
Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 109/182 (59%), Positives = 132/182 (72%), Gaps = 1/182 (0%)
Query: 33 QVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIR 92
QV SE SDD+AS SREEGLECPICWESFN+VE +PYVLWCGHTLCKNC+LGLQ AV++
Sbjct: 1 QVPSEYSDDEASSVVSREEGLECPICWESFNIVETVPYVLWCGHTLCKNCILGLQWAVVK 60
Query: 93 LPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVESMNGDRSKSNPHFRGD 152
PTLP QLP FI+CPWCN++S RL+ +GNLKFP+KNY+LLWMVES NGDR KS+ F D
Sbjct: 61 FPTLPIQLPLFISCPWCNLLSFRLVYRGNLKFPRKNYFLLWMVESKNGDREKSHGSFCED 120
Query: 153 HQPASSLNRNSAVRNQVSHAHNGRATCSHVSRQSEIRRDEGRFLTGHLNAERLQLSLRKS 212
QP S + N A+ NQ S + R H + S+ D + +LN R+ SL+KS
Sbjct: 121 QQPHWSSDSNLALGNQASRGNIRRGQYVHHAEPSDANHDHNH-VNSYLNVRRIHSSLQKS 179
Query: 213 LV 214
LV
Sbjct: 180 LV 181
>gi|297733919|emb|CBI15166.3| unnamed protein product [Vitis vinifera]
Length = 201
Score = 223 bits (569), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 100/137 (72%), Positives = 115/137 (83%)
Query: 17 AISGAIRLKNDALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGH 76
A+SG LKND LKP+Q SE SDD+ S N SREEGLECPICWESFN+VEN+PYVLWCGH
Sbjct: 8 ALSGTNGLKNDLLKPNQAPSECSDDEISTNTSREEGLECPICWESFNIVENVPYVLWCGH 67
Query: 77 TLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVE 136
TLCKNCVLGLQ AV++ PTLP QLPFFI+CPWCN++S RL+ KGNL FP+KN++LLWMVE
Sbjct: 68 TLCKNCVLGLQWAVVKFPTLPIQLPFFISCPWCNLLSFRLVYKGNLTFPRKNFFLLWMVE 127
Query: 137 SMNGDRSKSNPHFRGDH 153
SMNGDR KS+ F H
Sbjct: 128 SMNGDRGKSHSSFCDLH 144
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/56 (76%), Positives = 51/56 (91%)
Query: 223 FPLIIVLILIILYAIPASAAILALYILITIVFAIPSCLVLYFALPILDWLVREIIA 278
FPL+I+ +LI+LYAIPASAAILALYILIT++FA+PS L+LYFA P LDWLVREII
Sbjct: 146 FPLVIIFLLIVLYAIPASAAILALYILITVLFALPSFLILYFAYPSLDWLVREIIT 201
>gi|168026406|ref|XP_001765723.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683149|gb|EDQ69562.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 227
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 145/229 (63%), Gaps = 4/229 (1%)
Query: 48 SREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCP 107
S EEGLECP+CWESF+ +N PYVLWCGH+LCKNCVL L+ A ++L LP QLP FI CP
Sbjct: 1 SLEEGLECPVCWESFDDTDNTPYVLWCGHSLCKNCVLNLEWATVKLSGLPLQLPLFICCP 60
Query: 108 WCNMVSLRLICKGNLKFPQKNYYLLWMVESMNGDRSKSNPHFRGDHQPASSLNRNSAVRN 167
WC +++R KG L++P KN++LLW+VES+ G+ +S+ D +P+
Sbjct: 61 WCQFLTVRFKWKGQLRYPCKNFFLLWVVESLQGEHGRSSVCAE-DTEPSPLCGLGPV--- 116
Query: 168 QVSHAHNGRATCSHVSRQSEIRRDEGRFLTGHLNAERLQLSLRKSLVFFAQLTAKFPLII 227
+S H GRA VS + +R+D T + S + + F+Q + PL++
Sbjct: 117 SLSSPHAGRAGSGVVSPGAIVRQDPVIVATNRWGLHGWRRSGTRLVASFSQFMVRVPLVL 176
Query: 228 VLILIILYAIPASAAILALYILITIVFAIPSCLVLYFALPILDWLVREI 276
+ + I++Y +P S +LA+Y +IT++FA+PS LV+YF+ P LDWLVR I
Sbjct: 177 LFLFILVYVLPFSTLVLAIYCIITVLFAVPSFLVVYFSYPSLDWLVRAI 225
>gi|168032174|ref|XP_001768594.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680093|gb|EDQ66532.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 229
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 100/235 (42%), Positives = 144/235 (61%), Gaps = 8/235 (3%)
Query: 44 SLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFF 103
S + S EEGLECP+CWE + +N PYVLWCGH+LCK+CVL L+ A ++L LP QLP F
Sbjct: 1 SASRSLEEGLECPVCWEILDDRDNTPYVLWCGHSLCKSCVLNLEWATVKLSGLPLQLPLF 60
Query: 104 ITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVESMNGDRSKSNPHFRGDHQ--PASSLNR 161
I+CPWC ++ R KG LK+P KN++LLW+VES+ G+ + P + + P L+
Sbjct: 61 ISCPWCQFLTFRFKWKGQLKYPCKNFFLLWVVESLQGEHGRP-PACTNETELAPMFGLDL 119
Query: 162 NSAVRNQVSHAHNGRATCSHVSRQSEIRRDEGRFLTGHLNAERLQLSLRKSLVFFAQLTA 221
S + ++ GR S S + + + + N Q S + + Q TA
Sbjct: 120 ASLITSRA-----GRVGFSAASPGAIVTGNSVAAVGDWWNFHHWQRSGTRVVASLLQFTA 174
Query: 222 KFPLIIVLILIILYAIPASAAILALYILITIVFAIPSCLVLYFALPILDWLVREI 276
+ PL+++ + I++Y +P S +LALY LIT++FAIPS LV+YF+ P LDWLVR I
Sbjct: 175 RIPLVLLFLFIVVYVLPFSTLVLALYCLITVLFAIPSFLVVYFSYPSLDWLVRAI 229
>gi|449486571|ref|XP_004157335.1| PREDICTED: uncharacterized LOC101218619 [Cucumis sativus]
Length = 236
Score = 193 bits (490), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 119/266 (44%), Positives = 162/266 (60%), Gaps = 33/266 (12%)
Query: 13 LPVTAISGAIRLKNDALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVL 72
L AI+G IR K ++ QV E SDD+A SR+E LECPICWESFN+VEN+PYVL
Sbjct: 4 LASNAIAG-IRSKKNSDVSKQVFWECSDDEACSEASRDEELECPICWESFNIVENVPYVL 62
Query: 73 WCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYLL 132
WCGH+LCKNCVLGLQ +V++L T ++P I+CPWC+ +SLR++ KGNLKFP KN++LL
Sbjct: 63 WCGHSLCKNCVLGLQGSVLKLATRQIRIPIVISCPWCHQLSLRVVYKGNLKFPSKNFFLL 122
Query: 133 WMVESMNGDRSKSNPHFRGDHQPASSLNRNSAVRNQVSHAHNGRATCSHVSRQSEIRRDE 192
WMVES NG+ K + F D+ P SL +
Sbjct: 123 WMVESFNGNEGKLDHSFNSDNHPLFSLPSGTG---------------------------- 154
Query: 193 GRFLTGHLNAERLQLSLRKSLVFFAQLTAKFPLIIVLILIILYAIPASAAILALYILITI 252
TG + +ER +L L F L KF L+++ +LI+++ IP SA IL LY+LIT+
Sbjct: 155 ----TGTVTSERRRLFFYNHLDFVVHLIFKFLLLVIFVLIVVFVIPGSALILLLYLLITL 210
Query: 253 VFAIPSCLVLYFALPILDWLVREIIA 278
+FA+PS L+ Y A L+ L+ +I +
Sbjct: 211 LFALPSLLIFYLAFHALEKLMNDITS 236
>gi|383165550|gb|AFG65655.1| Pinus taeda anonymous locus 0_18384_02 genomic sequence
Length = 154
Score = 167 bits (423), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 87/162 (53%), Positives = 108/162 (66%), Gaps = 13/162 (8%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
EE LECPICWESFN+VEN+PYVLWCGHTLCKNCVLGLQ A ++ PTLP QLP FI+CPWC
Sbjct: 1 EERLECPICWESFNIVENIPYVLWCGHTLCKNCVLGLQWATVKFPTLPVQLPLFISCPWC 60
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMNGDRSKSNPHFRGDHQ---PASSLNRNSAVR 166
++S RL+ KG LKFP+KN++LLWMVESMN +R + + GD + L+ SA
Sbjct: 61 QLLSFRLVWKGCLKFPRKNFFLLWMVESMNDER-RLHGSIGGDQGVLPTNAGLDSGSASI 119
Query: 167 NQVSHAHNGRATCSHVSRQSEIRRDEG--RFLTGHLNAERLQ 206
+H H C+HV S RR G + ++NA L
Sbjct: 120 LSANHRH-----CAHVEHPS--RRSNGIMDVVRNYMNANMLH 154
>gi|361067535|gb|AEW08079.1| Pinus taeda anonymous locus 0_18384_02 genomic sequence
gi|383165541|gb|AFG65646.1| Pinus taeda anonymous locus 0_18384_02 genomic sequence
gi|383165542|gb|AFG65647.1| Pinus taeda anonymous locus 0_18384_02 genomic sequence
gi|383165543|gb|AFG65648.1| Pinus taeda anonymous locus 0_18384_02 genomic sequence
gi|383165544|gb|AFG65649.1| Pinus taeda anonymous locus 0_18384_02 genomic sequence
gi|383165545|gb|AFG65650.1| Pinus taeda anonymous locus 0_18384_02 genomic sequence
gi|383165546|gb|AFG65651.1| Pinus taeda anonymous locus 0_18384_02 genomic sequence
gi|383165547|gb|AFG65652.1| Pinus taeda anonymous locus 0_18384_02 genomic sequence
gi|383165548|gb|AFG65653.1| Pinus taeda anonymous locus 0_18384_02 genomic sequence
gi|383165549|gb|AFG65654.1| Pinus taeda anonymous locus 0_18384_02 genomic sequence
gi|383165551|gb|AFG65656.1| Pinus taeda anonymous locus 0_18384_02 genomic sequence
gi|383165552|gb|AFG65657.1| Pinus taeda anonymous locus 0_18384_02 genomic sequence
gi|383165553|gb|AFG65658.1| Pinus taeda anonymous locus 0_18384_02 genomic sequence
gi|383165554|gb|AFG65659.1| Pinus taeda anonymous locus 0_18384_02 genomic sequence
gi|383165555|gb|AFG65660.1| Pinus taeda anonymous locus 0_18384_02 genomic sequence
gi|383165556|gb|AFG65661.1| Pinus taeda anonymous locus 0_18384_02 genomic sequence
gi|383165557|gb|AFG65662.1| Pinus taeda anonymous locus 0_18384_02 genomic sequence
Length = 154
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 87/162 (53%), Positives = 108/162 (66%), Gaps = 13/162 (8%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
EE LECPICWESFN+VEN+PYVLWCGHTLCKNCVLGLQ A ++ PTLP QLP FI+CPWC
Sbjct: 1 EERLECPICWESFNIVENVPYVLWCGHTLCKNCVLGLQWATVKFPTLPVQLPLFISCPWC 60
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMNGDRSKSNPHFRGDHQ---PASSLNRNSAVR 166
++S RL+ KG LKFP+KN++LLWMVESMN +R + + GD + L+ SA
Sbjct: 61 QLLSFRLVWKGCLKFPRKNFFLLWMVESMNDER-RLHGSIGGDQGVLPTNAGLDSGSASI 119
Query: 167 NQVSHAHNGRATCSHVSRQSEIRRDEG--RFLTGHLNAERLQ 206
+H H C+HV S RR G + ++NA L
Sbjct: 120 LSANHRH-----CAHVEHPS--RRSNGIMDVVRNYMNANMLH 154
>gi|361067537|gb|AEW08080.1| Pinus taeda anonymous locus 0_18384_02 genomic sequence
Length = 154
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 79/138 (57%), Positives = 102/138 (73%), Gaps = 2/138 (1%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
EE LECPICWESFN+VEN+PYVLWCGHTLCKNCVLGLQ A ++ PTLP QLP FI+CPWC
Sbjct: 1 EERLECPICWESFNIVENVPYVLWCGHTLCKNCVLGLQWATVKFPTLPVQLPLFISCPWC 60
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMNGDRSKSNPHFRGDHQP-ASSLNRNSAVRNQ 168
++S RL+ KG LKFP+KN++LLWMVESMN +R + + GD +++ +S +
Sbjct: 61 QLLSFRLVWKGCLKFPRKNFFLLWMVESMNDER-RLHGSIGGDQGVLPTNVGLDSGSASV 119
Query: 169 VSHAHNGRATCSHVSRQS 186
+S H A H+S++S
Sbjct: 120 LSANHRACAHVEHLSQRS 137
>gi|255628311|gb|ACU14500.1| unknown [Glycine max]
Length = 109
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 63/97 (64%), Positives = 81/97 (83%)
Query: 21 AIRLKNDALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCK 80
+I LK + +PSQ S+E SDD+ N SR+EGLECPICWESFN+VEN+PYVLWCGHTLCK
Sbjct: 12 SIGLKRGSKQPSQTSAECSDDEVCSNASRDEGLECPICWESFNIVENVPYVLWCGHTLCK 71
Query: 81 NCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSLRLI 117
NC+LGLQ AV++ PT ++PFFI+CPWC+++S R+I
Sbjct: 72 NCILGLQWAVVKFPTQQIKIPFFISCPWCHLLSFRII 108
>gi|302817853|ref|XP_002990601.1| hypothetical protein SELMODRAFT_132049 [Selaginella moellendorffii]
gi|300141523|gb|EFJ08233.1| hypothetical protein SELMODRAFT_132049 [Selaginella moellendorffii]
Length = 265
Score = 147 bits (370), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 92/235 (39%), Positives = 133/235 (56%), Gaps = 18/235 (7%)
Query: 47 NSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITC 106
N ++ LECP+CWE+FN ++ PYVL+CGHTLCK C++GLQ I+ L L + C
Sbjct: 45 NPWDDCLECPVCWENFNGGDHTPYVLFCGHTLCKTCLMGLQWGTIKPLQLQLPL--LVPC 102
Query: 107 PWCNMVSLRLICKGN-LKFPQKNYYLLWMVESMNGDRSKSNPHFRG--DHQPASSLNRNS 163
PWC ++LRL KG LKFP KN++LL +VE+ G S + DH PAS
Sbjct: 103 PWCQFLTLRLSWKGGRLKFPAKNFFLLSIVEAARGSSSAATTECSKPEDHVPASRRLDKG 162
Query: 164 AVRNQVSHAHNGRATCSHVSRQSEIRRDEGRFLTGHLNAERLQLSLRKSLVFFAQLTAKF 223
A R + + + RR + NA+++ +R AQ+ +K
Sbjct: 163 AWR---------MSDVWQIGLNLQQRRVWHEIVHDEWNADQVLKLIR----LIAQVISKL 209
Query: 224 PLIIVLILIILYAIPASAAILALYILITIVFAIPSCLVLYFALPILDWLVREIIA 278
P +I+L+ ++ Y +P SA +L LY L+T+VFA+P LVLYF+ P + WL REI+A
Sbjct: 210 PPMILLLFLVFYVLPFSALVLVLYSLVTLVFAVPCYLVLYFSYPGMQWLAREIVA 264
>gi|449452158|ref|XP_004143827.1| PREDICTED: uncharacterized protein LOC101218619 [Cucumis sativus]
Length = 192
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 93/266 (34%), Positives = 126/266 (47%), Gaps = 77/266 (28%)
Query: 13 LPVTAISGAIRLKNDALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVL 72
L AI+G IR K ++ QV E SDD+A SR+E LECPICWESFN+VENL
Sbjct: 4 LASNAIAG-IRSKKNSDVSKQVFWECSDDEACSEASRDEELECPICWESFNIVENL---- 58
Query: 73 WCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYLL 132
SLR++ KGNLKFP KN++LL
Sbjct: 59 ----------------------------------------SLRVVYKGNLKFPSKNFFLL 78
Query: 133 WMVESMNGDRSKSNPHFRGDHQPASSLNRNSAVRNQVSHAHNGRATCSHVSRQSEIRRDE 192
WMVES NG+ K + F D+ P SL +
Sbjct: 79 WMVESFNGNEGKLDHSFNSDNHPLFSLPSGTG---------------------------- 110
Query: 193 GRFLTGHLNAERLQLSLRKSLVFFAQLTAKFPLIIVLILIILYAIPASAAILALYILITI 252
TG + +ER +L L F L KF L+++ +LI+++ IP SA IL LY+LIT+
Sbjct: 111 ----TGTVTSERRRLFFYNHLDFVVHLIFKFLLLVIFVLIVVFVIPGSALILLLYLLITL 166
Query: 253 VFAIPSCLVLYFALPILDWLVREIIA 278
+FA+PS L+ Y A L+ L+ +I +
Sbjct: 167 LFALPSLLIFYLAFHALEKLMNDITS 192
>gi|341876595|gb|EGT32530.1| hypothetical protein CAEBREN_02584 [Caenorhabditis brenneri]
Length = 797
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 53/122 (43%), Gaps = 20/122 (16%)
Query: 35 SSELSDDDASLNNSREE-------------GLECPICWESFNVVENLPYVLWCGHTLCKN 81
++ + + S+N ++EE G C IC++ FN + +P V CGHT C +
Sbjct: 89 QEKVEEPEPSINKAKEEIDPILTPKGTEMKGFSCMICYDPFNTEKRIPKVFPCGHTFCLS 148
Query: 82 CVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVESMNGD 141
CV GL + F + CP C + + G K P N+ +L M+E +
Sbjct: 149 CVQGLMKNRT------FMSSSTVYCPTCRQNTRYSMSAGAEKVP-TNFCILAMLEQRKEE 201
Query: 142 RS 143
S
Sbjct: 202 SS 203
>gi|341876719|gb|EGT32654.1| hypothetical protein CAEBREN_00266 [Caenorhabditis brenneri]
Length = 771
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 53/122 (43%), Gaps = 20/122 (16%)
Query: 35 SSELSDDDASLNNSREE-------------GLECPICWESFNVVENLPYVLWCGHTLCKN 81
++ + + S+N ++EE G C IC++ FN + +P V CGHT C +
Sbjct: 115 QEKVEEPEPSINKAKEEIDPILTPKGTEMKGFSCMICYDPFNTEKRIPKVFPCGHTFCLS 174
Query: 82 CVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVESMNGD 141
CV GL + F + CP C + + G K P N+ +L M+E +
Sbjct: 175 CVQGLMK------NRTFMSSSTVYCPTCRQNTRYSMSAGAEKVP-TNFCILAMLEQRKEE 227
Query: 142 RS 143
S
Sbjct: 228 SS 229
>gi|341895836|gb|EGT51771.1| hypothetical protein CAEBREN_22293 [Caenorhabditis brenneri]
Length = 386
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Query: 49 REEGLECPICWESFN--VVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITC 106
++E LEC IC F+ + N+P +L CGHT+C +C LQ+ + F I C
Sbjct: 7 KKEALECKICINPFSDTIESNIPRILGCGHTICHSCAESLQKVSLD--------KFSIRC 58
Query: 107 PWCNMVSLRLICKGNLKFPQKNYYLLWMVESMN--GDRSKS 145
P+ ++ GN++ +NY ++ ++++ N DR++
Sbjct: 59 PFDRQITANFY--GNVEKLLRNYAIIDLIQARNEEADRAEE 97
>gi|341874470|gb|EGT30405.1| hypothetical protein CAEBREN_21414 [Caenorhabditis brenneri]
Length = 466
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 16 TAISGAIRLKNDALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCG 75
T G K L P +S +DD++ + + CPIC ++++ +P VLWCG
Sbjct: 84 TFCCGIKYKKEYNLTPFNISLNFEEDDSADDFG---AMHCPICLNKYDMLTRIPLVLWCG 140
Query: 76 HTLCKNCVLGLQRAVIRL 93
HT+CK+C+ ++ V L
Sbjct: 141 HTMCKSCLEADKKRVDEL 158
>gi|297850596|ref|XP_002893179.1| preprotein translocase secA family protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339021|gb|EFH69438.1| preprotein translocase secA family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1579
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 19/75 (25%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
E ECP+C +SF+ +P VL CGHT C+ C L LP + P I CP C
Sbjct: 2 EAPECPVCLQSFDGESTVPRVLACGHTACEEC----------LTNLPKKFPDTIRCPACT 51
Query: 111 MVSLRLICKGNLKFP 125
++ +KFP
Sbjct: 52 VL---------VKFP 57
>gi|403360670|gb|EJY80017.1| RING domain containing protein [Oxytricha trifallax]
Length = 830
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 10/72 (13%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
E EC IC+ ++ +P +L CGHT C+ C+ I+LP+ ITCP C
Sbjct: 2 EKEECSICFFQYDKHHKIPRILRCGHTFCQTCL-----DEIKLPS-----KHSITCPNCR 51
Query: 111 MVSLRLICKGNL 122
+ + +IC NL
Sbjct: 52 VKTENVICTKNL 63
>gi|403340071|gb|EJY69303.1| Kelch motif family protein [Oxytricha trifallax]
Length = 598
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 12/57 (21%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
+ CPIC++ +N + +P +L CGHT C+NC++ L+ + I +TCP C
Sbjct: 3 ITCPICFDQYNDKDKIPRILQCGHTFCQNCLMDLRTSNI------------LTCPTC 47
>gi|198451974|ref|XP_002137407.1| GA26569 [Drosophila pseudoobscura pseudoobscura]
gi|198131731|gb|EDY67965.1| GA26569 [Drosophila pseudoobscura pseudoobscura]
Length = 209
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 40/96 (41%), Gaps = 19/96 (19%)
Query: 16 TAISGAIRLKNDALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCG 75
TA +G + PS+ + +D + SL EE CPICWES V P CG
Sbjct: 121 TATTGPTASDAEVSGPSRPKRQRTDSNESL----EETYNCPICWES--VSNRDPVATKCG 174
Query: 76 HTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNM 111
H C+ C+ R IR F CP C M
Sbjct: 175 HIFCRQCI----RTAIR---------RFHKCPLCRM 197
>gi|71998586|ref|NP_494238.2| Protein ZK1240.9 [Caenorhabditis elegans]
gi|351065655|emb|CCD61649.1| Protein ZK1240.9 [Caenorhabditis elegans]
Length = 216
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 16/91 (17%)
Query: 53 LECPICWESFNVVE--NLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
L+C +C E ++ ++ ++P VL CGH++C+NC L A++ I CP+C
Sbjct: 4 LQCEVCNEDYSDIDEDHIPKVLKCGHSVCQNCATQLITALL------------IICPFCR 51
Query: 111 MVSLRLICKGNLKFPQKNYYLLWMVESMNGD 141
+ I G+ + QKN+ L+ ++ M D
Sbjct: 52 ETT--EISDGDDQKLQKNFALVQAIQVMKAD 80
>gi|341895853|gb|EGT51788.1| hypothetical protein CAEBREN_26206 [Caenorhabditis brenneri]
Length = 708
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 12/95 (12%)
Query: 49 REEGLECPICWESFN--VVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITC 106
++E LEC IC F+ + N+P +L CGHT+C +C LQ+ + F I C
Sbjct: 7 KKEALECKICINPFSDTIESNIPRILNCGHTICHSCAESLQKVSLD--------KFSIGC 58
Query: 107 PWCNMVSLRLICKGNLKFPQKNYYLLWMVESMNGD 141
P+ ++ GN++ +NY ++ ++++ N +
Sbjct: 59 PFDRQITSNFY--GNVEKLLRNYAIIDLIQARNEE 91
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 12/98 (12%)
Query: 46 NNSREEGLECPICWESFN--VVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFF 103
N R+EGLEC +C F+ + N+P +L CGHT+C +C LQ+ +
Sbjct: 343 NVQRKEGLECKVCMNPFSDTIGYNIPRMLDCGHTVCHSCAESLQKVAPDKRS-------- 394
Query: 104 ITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVESMNGD 141
I CP+ V+ GN+ ++NY ++ ++++ N +
Sbjct: 395 IRCPFDRHVTDGFY--GNVDNLRRNYAIIDLIQARNEE 430
>gi|341876118|gb|EGT32053.1| hypothetical protein CAEBREN_07415 [Caenorhabditis brenneri]
Length = 313
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 54/120 (45%), Gaps = 20/120 (16%)
Query: 30 KPSQVSSELSDDDASLNNSREEGLE-----CPICWESFNVVEN--LPYVLWCGHTLCKNC 82
K V SE SD D+S+ ++ + E C IC F+ P +L CGHTLC NC
Sbjct: 203 KKDDVVSEASDSDSSVEDAMDSVTELSVTTCKICLRGFSETSKRRAPLMLRCGHTLCWNC 262
Query: 83 VLGLQRAVIRLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVESMNGDR 142
L++ L +TCP+C + C + P KNY ++ M++ N R
Sbjct: 263 CKELKKQ---------NLYMHVTCPFCRKETF---CDSLEELP-KNYAVIEMIQMKNQRR 309
>gi|17509101|ref|NP_491266.1| Protein T20F5.6 [Caenorhabditis elegans]
gi|351060151|emb|CCD67781.1| Protein T20F5.6 [Caenorhabditis elegans]
Length = 794
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 9/119 (7%)
Query: 32 SQVSSELSDDDASLNNSREE--GLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRA 89
++ E DD L + E GL C IC++ FN + +P V CGHT+C C+ L
Sbjct: 91 NEKEKEDEADDTILTSKGTEMKGLSCGICYDPFNTGKRIPKVFPCGHTICLQCIKKL--- 147
Query: 90 VIRLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVESMNGDRSKSNPH 148
L T F + CP C + + K P N+ + ++E ++S P
Sbjct: 148 ---LNTRTFLGGNTVICPSCRQNTRYSLTTPADKIP-TNFCIQSLLEQRQQEKSTKEPE 202
>gi|25395432|pir||H88071 protein ZK1240.3 [imported] - Caenorhabditis elegans
Length = 562
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 16/91 (17%)
Query: 53 LECPICWESFNVVE--NLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
L+C +C E ++ ++ ++P VL CGH++C+NC L A++ I CP+C
Sbjct: 4 LQCEVCNEDYSDIDEDHIPKVLKCGHSVCQNCATQLITALL------------IICPFCR 51
Query: 111 MVSLRLICKGNLKFPQKNYYLLWMVESMNGD 141
+ I G+ + QKN+ L+ ++ M D
Sbjct: 52 ETT--EISDGDDQKLQKNFALVQAIQVMKAD 80
>gi|125817281|ref|XP_001333631.1| PREDICTED: RING finger protein 186 isoform 1 [Danio rerio]
gi|292614184|ref|XP_002662175.1| PREDICTED: RING finger protein 186 [Danio rerio]
gi|292614244|ref|XP_002662202.1| PREDICTED: RING finger protein 186-like [Danio rerio]
Length = 187
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 22 IRLKNDALKPSQVSSELSDDDASLNNSRE-EGLECPICWESFNVVENLPYVLWCGHTLCK 80
I +K+ + + V ++ D DA NSR+ L+C +C+ ++N+ E LP L+CGHT C+
Sbjct: 23 ISVKDGPVSATPVEGDV-DADAGAQNSRDSRKLDCIVCYSAYNLGERLPRKLYCGHTFCQ 81
Query: 81 NCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
C+ RL TL +I CP C
Sbjct: 82 ACLK-------RLDTL-INEQMWIPCPQC 102
>gi|334182750|ref|NP_001185058.1| preprotein translocase secA-like protein [Arabidopsis thaliana]
gi|332192012|gb|AEE30133.1| preprotein translocase secA-like protein [Arabidopsis thaliana]
Length = 1805
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 19/72 (26%)
Query: 54 ECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVS 113
ECP+C +S++ +P VL CGHT C+ C L LP + P I CP C ++
Sbjct: 5 ECPVCLQSYDGESTVPRVLACGHTACEEC----------LTNLPKKFPDTIRCPACTVL- 53
Query: 114 LRLICKGNLKFP 125
+KFP
Sbjct: 54 --------VKFP 57
>gi|198459948|ref|XP_002136030.1| GA23991 [Drosophila pseudoobscura pseudoobscura]
gi|198140180|gb|EDY70969.1| GA23991 [Drosophila pseudoobscura pseudoobscura]
Length = 209
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 42/98 (42%), Gaps = 19/98 (19%)
Query: 16 TAISGAIRLKNDALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCG 75
TA +G + PS+ + +D + SL EE CPIC+ES V P CG
Sbjct: 121 TATTGPTASDAEVSGPSRPKRQRTDSNESL----EETYNCPICFES--VSSRDPVATKCG 174
Query: 76 HTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVS 113
H C+ C+ R VIR F CP C M S
Sbjct: 175 HVFCRQCI----RTVIRR---------FHKCPVCRMRS 199
>gi|255558580|ref|XP_002520315.1| F-box and wd40 domain protein, putative [Ricinus communis]
gi|223540534|gb|EEF42101.1| F-box and wd40 domain protein, putative [Ricinus communis]
Length = 1794
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 26/115 (22%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
E ECP+C ++++ +P VL CGHT C++C L +LP + P I CP C
Sbjct: 2 EWAECPVCLQNYDGEYAIPRVLTCGHTTCESC----------LKSLPQKYPQTIRCPACV 51
Query: 111 MVSLRLICKGNLKFPQ-------KNYYLLWMVESMNGDRSKSNPHFRGDHQPASS 158
+ +KFP KN LL ++ + + + N DHQ S+
Sbjct: 52 QL---------VKFPSLGPSSLPKNIDLLRLIPTNHKKKQPINHSRSSDHQVDSA 97
>gi|198458957|ref|XP_002136127.1| GA28704 [Drosophila pseudoobscura pseudoobscura]
gi|198458961|ref|XP_002136128.1| GA28705 [Drosophila pseudoobscura pseudoobscura]
gi|198142321|gb|EDY71095.1| GA28704 [Drosophila pseudoobscura pseudoobscura]
gi|198142322|gb|EDY71096.1| GA28705 [Drosophila pseudoobscura pseudoobscura]
Length = 209
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 42/98 (42%), Gaps = 19/98 (19%)
Query: 16 TAISGAIRLKNDALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCG 75
TA +G + PS+ + +D + SL EE CPIC+ES V P CG
Sbjct: 121 TATTGPTASDAEVSGPSRPKRQRTDSNESL----EETYNCPICFES--VSSRDPVATKCG 174
Query: 76 HTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVS 113
H C+ C+ R VIR F CP C M S
Sbjct: 175 HVFCRQCI----RTVIRR---------FHKCPVCRMRS 199
>gi|198477762|ref|XP_002136453.1| GA28682 [Drosophila pseudoobscura pseudoobscura]
gi|198145219|gb|EDY71923.1| GA28682 [Drosophila pseudoobscura pseudoobscura]
Length = 138
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 42/99 (42%), Gaps = 19/99 (19%)
Query: 16 TAISGAIRLKNDALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCG 75
TA +G + PS+ + +D + SL EE CPIC+ES V P CG
Sbjct: 50 TATTGPTASDAEVSGPSRPKRQRTDSNESL----EETYNCPICFES--VSSRDPVATKCG 103
Query: 76 HTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSL 114
H C+ C+ R VIR F CP C M S
Sbjct: 104 HVFCRQCI----RTVIRR---------FHKCPVCRMRST 129
>gi|403348751|gb|EJY73819.1| hypothetical protein OXYTRI_04928 [Oxytricha trifallax]
Length = 264
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 57/128 (44%), Gaps = 27/128 (21%)
Query: 53 LECPICWESFNVVENLPYVL-WCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNM 111
++C +C E FN E++P VL CGHT C+ C+L L + I+CP C
Sbjct: 1 MDCELCLEEFNQQEHMPKVLPQCGHTFCEKCMLQLWQNQT------------ISCPLCRQ 48
Query: 112 VSLRLICKGNLKFPQKNYYLLWMVESMNGDRSKS---------NPHFRGDHQPASSLNRN 162
+ R+ +L PQ NY LL + M +R NP +G + ++NR
Sbjct: 49 KA-RITNPNDL--PQTNYALLRVHSQMKEERKAKSLIDQYRVINP--KGYLEIEETINRQ 103
Query: 163 SAVRNQVS 170
NQ+
Sbjct: 104 HGQPNQLQ 111
>gi|308485130|ref|XP_003104764.1| hypothetical protein CRE_23992 [Caenorhabditis remanei]
gi|308257462|gb|EFP01415.1| hypothetical protein CRE_23992 [Caenorhabditis remanei]
Length = 1650
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 36/127 (28%), Positives = 55/127 (43%), Gaps = 10/127 (7%)
Query: 10 PSSLPVTAISGAIRLKNDALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLP 69
P+ A++G + K+ ++V EL + + G C IC++SFN + P
Sbjct: 856 PNGQGEAAVAGVLDAKS---FKNKVKEELEGPILTEKGTEMRGFSCVICYDSFNTGKRTP 912
Query: 70 YVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNY 129
V CGHT C +CV GL + F + CP C + G K P N+
Sbjct: 913 KVFPCGHTFCLSCVKGL------MTNRSFLSSSTVICPTCRQNTRFSTGLGAEKIP-TNF 965
Query: 130 YLLWMVE 136
+L M+E
Sbjct: 966 SVLSMLE 972
Score = 40.4 bits (93), Expect = 0.88, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 44 SLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
S + + EE C +C+ F+ +P +L CGH+LC++C+ L
Sbjct: 13 SPSEAAEEKPSCMVCYNDFHSKSRVPKILPCGHSLCQDCITTL 55
>gi|294963187|gb|ADF50083.1| putative ubiquitin-protein ligase/zinc ion binding [Olea europaea]
Length = 58
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 22/33 (66%), Positives = 27/33 (81%)
Query: 203 ERLQLSLRKSLVFFAQLTAKFPLIIVLILIILY 235
ERL SL KSLVFF LTAKFPL+I+ ++I+LY
Sbjct: 25 ERLHSSLTKSLVFFVHLTAKFPLVIIFLIIVLY 57
>gi|403345059|gb|EJY71886.1| Kelch motif family protein [Oxytricha trifallax]
Length = 1278
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 11/121 (9%)
Query: 55 CPICWESFNVVENLPYVL-WCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVS 113
CP C FN +P +L +CGHT C++C+ ++++ T Q ++ CP C+ +
Sbjct: 3 CPNCQLEFNSTVQIPRILIFCGHTFCQSCI----ESLLQQSTDEAQGKTYLNCPECD--T 56
Query: 114 LRLICKGNLKFPQKNYYLLWMVESMNGDRSKSNPHFRGDHQPASSLNRNSAVRNQVSHAH 173
+ G FP KN LL M + + P D+ S L + ++ +NQ+
Sbjct: 57 QNVANDGINSFP-KNLVLLQMYTQITNPSQQPKPQNNNDN---SGLIQQNSFQNQIPSNE 112
Query: 174 N 174
N
Sbjct: 113 N 113
>gi|403345056|gb|EJY71884.1| Kelch motif family protein [Oxytricha trifallax]
Length = 1281
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 11/121 (9%)
Query: 55 CPICWESFNVVENLPYVL-WCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVS 113
CP C FN +P +L +CGHT C++C+ ++++ T Q ++ CP C+ +
Sbjct: 3 CPNCQLEFNSTVQIPRILIFCGHTFCQSCI----ESLLQQSTDEAQGKTYLNCPECD--T 56
Query: 114 LRLICKGNLKFPQKNYYLLWMVESMNGDRSKSNPHFRGDHQPASSLNRNSAVRNQVSHAH 173
+ G FP KN LL M + + P D+ S L + ++ +NQ+
Sbjct: 57 QNVANDGINSFP-KNLVLLQMYTQITNPSQQPKPQNNNDN---SGLIQQNSFQNQIPSNE 112
Query: 174 N 174
N
Sbjct: 113 N 113
>gi|308485230|ref|XP_003104814.1| hypothetical protein CRE_23991 [Caenorhabditis remanei]
gi|308257512|gb|EFP01465.1| hypothetical protein CRE_23991 [Caenorhabditis remanei]
Length = 627
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 12/88 (13%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMV 112
+ CP+C E +N+ E P + CGHT+C C L +P + CP C
Sbjct: 17 ISCPVCREVYNLTERSPINVPCGHTICSQCSSAL---------VPRHTQPVLMCPVCRKR 67
Query: 113 SLRLICKG--NLKFPQKNYYLLWMVESM 138
+ G FP KNY LL +VE +
Sbjct: 68 HYGQLNGGAYTFSFP-KNYQLLEVVEKV 94
>gi|25151067|ref|NP_740796.1| Protein Y51F10.2 [Caenorhabditis elegans]
gi|373220546|emb|CCD73473.1| Protein Y51F10.2 [Caenorhabditis elegans]
Length = 305
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 55 CPICWESFNVVENLPYVLWCGHTLCKNCVLGL--QRAVIRLPTLPFQLPF-FITCPWCNM 111
C IC E F+ ++LP +L C HT+C+ C+ GL +++ I P F I CP C
Sbjct: 19 CRICLEPFDEGQHLPKILQCAHTVCERCI-GLLDEQSRINHNRPPIDRSFVHIRCPVC-- 75
Query: 112 VSLRLICKGNLKFPQKNYYLLWMVESMNGD 141
R + + + + NY L+ +++SM G+
Sbjct: 76 ---RAVTQTPRNYIRSNYQLIELMDSMRGE 102
>gi|348535057|ref|XP_003455018.1| PREDICTED: E3 ubiquitin-protein ligase TRIM32 [Oreochromis
niloticus]
Length = 667
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
E LECPIC E++N + P +L CGHT+C+ C+ L I + CP+C+
Sbjct: 12 EVLECPICLETYNQEQMRPKLLQCGHTVCRQCLEKLLANTIN----------GVRCPFCS 61
Query: 111 MVS 113
VS
Sbjct: 62 KVS 64
>gi|268560964|ref|XP_002646332.1| Hypothetical protein CBG12045 [Caenorhabditis briggsae]
Length = 840
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 39/135 (28%), Positives = 60/135 (44%), Gaps = 10/135 (7%)
Query: 5 IGNYFPSSLPVTAISGAIRLKNDAL-KPSQVSSELSDDDASLN--NSREEGLECPICWES 61
+G P PV +GA ++ KPS+ + + +A L + +G C IC++
Sbjct: 103 VGAGDPEVQPVENQNGAASDTGESTNKPSEDNLKEDRIEAILTPKGTEMKGFSCMICYDP 162
Query: 62 FNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSLRLICKGN 121
FN + +P V CGHT C +CV GL + L + CP C + +
Sbjct: 163 FNTGKRIPKVFPCGHTFCLSCVGGLMKNRTYLSRST------VVCPTCRQNTQYPMTLNP 216
Query: 122 LKFPQKNYYLLWMVE 136
K P NY +L M+E
Sbjct: 217 EKVP-TNYSVLSMLE 230
>gi|47218690|emb|CAG12414.1| unnamed protein product [Tetraodon nigroviridis]
Length = 541
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 10/63 (15%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
E LECPIC+E++N + P +L CGHT+C++C+ L I + CP+C+
Sbjct: 13 EVLECPICFETYNQSQLRPKLLQCGHTVCQHCLEKLLANTIN----------GVRCPFCS 62
Query: 111 MVS 113
VS
Sbjct: 63 KVS 65
>gi|341895866|gb|EGT51801.1| hypothetical protein CAEBREN_20440 [Caenorhabditis brenneri]
Length = 806
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 12/93 (12%)
Query: 51 EGLECPICWESF-NVVE-NLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPW 108
+ LEC +C F + +E N+P VL CGHT+C +C LQ+ P + FFI CP+
Sbjct: 447 QKLECKVCINPFSDTIECNIPRVLDCGHTVCTSCAESLQKVA------PDK--FFIRCPF 498
Query: 109 CNMVSLRLICKGNLKFPQKNYYLLWMVESMNGD 141
M++ G + ++NY ++ ++++ N +
Sbjct: 499 DRMITNGF--NGKVGSLRRNYAIIDLIQARNEE 529
Score = 37.0 bits (84), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 17/89 (19%)
Query: 52 GLECPICWESFN--VVENLPYVLW-CGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPW 108
LEC IC F+ + P +L CGHT+C++C L R F ITCP+
Sbjct: 113 SLECKICVRQFSEEIGGLTPRILTSCGHTVCEDCAKRLLRG------------FDITCPF 160
Query: 109 CNMVSLRLICKGNLKFPQKNYYLLWMVES 137
++ + + + QKN+ LL +++
Sbjct: 161 DRKIT--TVTNTGISYLQKNFTLLEVLQE 187
>gi|392889325|ref|NP_494244.2| Protein F43C11.8 [Caenorhabditis elegans]
gi|351061780|emb|CCD69626.1| Protein F43C11.8 [Caenorhabditis elegans]
Length = 323
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 43/97 (44%), Gaps = 18/97 (18%)
Query: 53 LECPICWESFNVV--ENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
+EC IC E F+ EN+P +L CGHT+C C L + + I CP+C
Sbjct: 4 IECEICNEDFSSATDENIPRILRCGHTICHGCAEKLLQNSM------------ILCPFCR 51
Query: 111 MVSLRLICKGNLKFPQKNYYLLWMVESMNGDRSKSNP 147
+ +K QKN+ LL VE + +P
Sbjct: 52 EATN----VSTVKDLQKNFALLQAVEHAKTRTEEKDP 84
>gi|294461123|gb|ADE76127.1| unknown [Picea sitchensis]
Length = 221
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 12/93 (12%)
Query: 54 ECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVS 113
ECP+CW+SF+ ++P +L CGHT+C+ C L LP ++ C C
Sbjct: 5 ECPVCWDSFDRDTHMPRLLRCGHTVCQLC----------LKCLPTEMRLGQRCLRCPECR 54
Query: 114 LRLICKGNLKFPQKNYYLLWMVE-SMNGDRSKS 145
+ + + + P KNY LL +++ S N DRS+S
Sbjct: 55 IPCVWRRVHELP-KNYILLRVMDSSSNTDRSQS 86
>gi|149410249|ref|XP_001508478.1| PREDICTED: E3 ubiquitin-protein ligase TRIM32 [Ornithorhynchus
anatinus]
Length = 669
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 10/63 (15%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
E LECPIC ESF + P +L CGHT+CK C+ L I + CP+C+
Sbjct: 16 EVLECPICMESFTEEQLRPKLLHCGHTICKQCLEKLLAGSIN----------GVRCPFCS 65
Query: 111 MVS 113
++
Sbjct: 66 KIT 68
>gi|186478734|ref|NP_001117325.1| zinc ion binding protein [Arabidopsis thaliana]
gi|17529236|gb|AAL38845.1| putative SecA-type chloroplast protein transport factor
[Arabidopsis thaliana]
gi|20465933|gb|AAM20152.1| putative SecA-type chloroplast transport factor protein
[Arabidopsis thaliana]
gi|110739333|dbj|BAF01579.1| hypothetical protein [Arabidopsis thaliana]
gi|332192014|gb|AEE30135.1| zinc ion binding protein [Arabidopsis thaliana]
Length = 811
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 10/59 (16%)
Query: 54 ECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMV 112
ECP+C +S++ +P VL CGHT C+ C L LP + P I CP C ++
Sbjct: 5 ECPVCLQSYDGESTVPRVLACGHTACEEC----------LTNLPKKFPDTIRCPACTVL 53
>gi|308486581|ref|XP_003105487.1| hypothetical protein CRE_22483 [Caenorhabditis remanei]
gi|308255453|gb|EFO99405.1| hypothetical protein CRE_22483 [Caenorhabditis remanei]
Length = 194
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 24/44 (54%)
Query: 55 CPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPF 98
C IC + FN ENLP L CGHT+C C+ L R+ PF
Sbjct: 132 CEICTDEFNEDENLPKALGCGHTVCAKCLKNLNEYNDRIVMCPF 175
>gi|308479985|ref|XP_003102200.1| hypothetical protein CRE_05895 [Caenorhabditis remanei]
gi|308262126|gb|EFP06079.1| hypothetical protein CRE_05895 [Caenorhabditis remanei]
Length = 238
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 55/120 (45%), Gaps = 21/120 (17%)
Query: 3 TPIGNYFPSS--LPVTAISGAI--RLKNDALKPSQVSSELSDDDASLNNSREEGLECPIC 58
T I N PSS T I G + L++ + + E+ D A+ + +R EC IC
Sbjct: 120 TFIENMIPSSGVDSNTIIDGIVTNELEDARRELVKARKEIEDSRAAHSQTR---FECEIC 176
Query: 59 WESFNVV--ENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSLRL 116
+ F + P VL CGHT+C NCV LQ+ +TCP+C +V+ L
Sbjct: 177 LQQFTDIAGNRAPKVLRCGHTICANCVNSLQQN------------NSVTCPFCRVVTSNL 224
>gi|5263316|gb|AAD41418.1|AC007727_7 Contains PF|00097 Zinc finger C3HC4 type and 4 WD40 PF|00400 (G
beta) domains [Arabidopsis thaliana]
Length = 860
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 10/59 (16%)
Query: 54 ECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMV 112
ECP+C +S++ +P VL CGHT C+ C L LP + P I CP C ++
Sbjct: 5 ECPVCLQSYDGESTVPRVLACGHTACEEC----------LTNLPKKFPDTIRCPACTVL 53
>gi|291234992|ref|XP_002737430.1| PREDICTED: tripartite motif protein 2-like [Saccoglossus
kowalevskii]
Length = 680
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 13/76 (17%)
Query: 35 SSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLP 94
+SE+ DDDA L E+ L C IC E ++ P +L C HT CK C++ L + V
Sbjct: 5 ASEVIDDDAVLAEINEDFLCCAICLERYSA----PKILPCQHTFCKKCLVQLAKKV---- 56
Query: 95 TLPFQLPFFITCPWCN 110
P CP CN
Sbjct: 57 -----APNTFMCPTCN 67
>gi|308456446|ref|XP_003090663.1| hypothetical protein CRE_23780 [Caenorhabditis remanei]
gi|308261316|gb|EFP05269.1| hypothetical protein CRE_23780 [Caenorhabditis remanei]
Length = 193
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 11/73 (15%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
E+ C +C + +N EN+P VL CGHT+C C+ L + + CP+C
Sbjct: 127 EDAPSCEVCTDEYNEDENMPKVLGCGHTICSKCLKNLDK-----------YNNSVNCPFC 175
Query: 110 NMVSLRLICKGNL 122
+ C NL
Sbjct: 176 RKRCCFMTCPPNL 188
>gi|307204934|gb|EFN83473.1| Roquin [Harpegnathos saltator]
Length = 954
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 23/38 (60%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC F+V E P L CGHT+C+ C+ L R
Sbjct: 10 EYLSCPICCHEFDVAERGPISLGCGHTICRTCLANLHR 47
>gi|341874008|gb|EGT29943.1| hypothetical protein CAEBREN_29929 [Caenorhabditis brenneri]
Length = 463
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 30/56 (53%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPW 108
+ECPIC F+ + P V+ CGHTLC+ C+ L L + LP + CP+
Sbjct: 112 IECPICNSEFDREKKTPKVMECGHTLCEECLTNLFSVNKELNSNRDTLPVPLCCPY 167
>gi|291408474|ref|XP_002720557.1| PREDICTED: tripartite motif-containing 32 [Oryctolagus cuniculus]
Length = 653
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
E LECPIC ESF + P +L CGHT+C+ C+ L + I + CP+C+
Sbjct: 16 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN----------GVRCPFCS 65
Query: 111 MVS 113
++
Sbjct: 66 KIT 68
>gi|165972387|ref|NP_001107066.1| E3 ubiquitin-protein ligase TRIM32 [Danio rerio]
gi|159155666|gb|AAI54642.1| Trim32 protein [Danio rerio]
gi|213627619|gb|AAI71687.1| Tripartite motif-containing 32 [Danio rerio]
gi|213627846|gb|AAI71691.1| Tripartite motif-containing 32 [Danio rerio]
Length = 663
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 10/63 (15%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
E LECPIC E++N + P +L CGH++C+ C+ L + I + CP+C+
Sbjct: 14 EVLECPICLETYNQDQLRPKLLQCGHSVCRQCLEKLLASTIN----------GVRCPFCS 63
Query: 111 MVS 113
VS
Sbjct: 64 KVS 66
>gi|444730241|gb|ELW70631.1| E3 ubiquitin-protein ligase TRIM32 [Tupaia chinensis]
Length = 653
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
E LECPIC ESF + P +L CGHT+C+ C+ L + I + CP+C+
Sbjct: 16 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN----------GVRCPFCS 65
Query: 111 MVS 113
++
Sbjct: 66 KIT 68
>gi|149756925|ref|XP_001504946.1| PREDICTED: e3 ubiquitin-protein ligase TRIM32 [Equus caballus]
Length = 653
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
E LECPIC ESF + P +L CGHT+C+ C+ L + I + CP+C+
Sbjct: 16 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN----------GVRCPFCS 65
Query: 111 MVS 113
++
Sbjct: 66 KIT 68
>gi|403266111|ref|XP_003925240.1| PREDICTED: E3 ubiquitin-protein ligase TRIM32 [Saimiri boliviensis
boliviensis]
Length = 653
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
E LECPIC ESF + P +L CGHT+C+ C+ L + I + CP+C+
Sbjct: 16 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN----------GVRCPFCS 65
Query: 111 MVS 113
++
Sbjct: 66 KIT 68
>gi|332229855|ref|XP_003264102.1| PREDICTED: E3 ubiquitin-protein ligase TRIM32 isoform 1 [Nomascus
leucogenys]
gi|332229857|ref|XP_003264103.1| PREDICTED: E3 ubiquitin-protein ligase TRIM32 isoform 2 [Nomascus
leucogenys]
gi|441622713|ref|XP_004088856.1| PREDICTED: E3 ubiquitin-protein ligase TRIM32 [Nomascus leucogenys]
gi|441622716|ref|XP_004088857.1| PREDICTED: E3 ubiquitin-protein ligase TRIM32 [Nomascus leucogenys]
Length = 653
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
E LECPIC ESF + P +L CGHT+C+ C+ L + I + CP+C+
Sbjct: 16 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN----------GVRCPFCS 65
Query: 111 MVS 113
++
Sbjct: 66 KIT 68
>gi|297685230|ref|XP_002820195.1| PREDICTED: E3 ubiquitin-protein ligase TRIM32 isoform 2 [Pongo
abelii]
Length = 653
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
E LECPIC ESF + P +L CGHT+C+ C+ L + I + CP+C+
Sbjct: 16 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN----------GVRCPFCS 65
Query: 111 MVS 113
++
Sbjct: 66 KIT 68
>gi|386780686|ref|NP_001248279.1| E3 ubiquitin-protein ligase TRIM32 [Macaca mulatta]
gi|402896559|ref|XP_003911363.1| PREDICTED: E3 ubiquitin-protein ligase TRIM32 [Papio anubis]
gi|355753075|gb|EHH57121.1| E3 ubiquitin-protein ligase TRIM32 [Macaca fascicularis]
gi|380785435|gb|AFE64593.1| E3 ubiquitin-protein ligase TRIM32 [Macaca mulatta]
gi|383411299|gb|AFH28863.1| E3 ubiquitin-protein ligase TRIM32 [Macaca mulatta]
gi|384945906|gb|AFI36558.1| E3 ubiquitin-protein ligase TRIM32 [Macaca mulatta]
Length = 653
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
E LECPIC ESF + P +L CGHT+C+ C+ L + I + CP+C+
Sbjct: 16 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN----------GVRCPFCS 65
Query: 111 MVS 113
++
Sbjct: 66 KIT 68
>gi|395824072|ref|XP_003785296.1| PREDICTED: E3 ubiquitin-protein ligase TRIM32 [Otolemur garnettii]
Length = 653
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
E LECPIC ESF + P +L CGHT+C+ C+ L + I + CP+C+
Sbjct: 16 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN----------GVRCPFCS 65
Query: 111 MVS 113
++
Sbjct: 66 KIT 68
>gi|350579556|ref|XP_003480637.1| PREDICTED: E3 ubiquitin-protein ligase TRIM32-like [Sus scrofa]
Length = 652
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
E LECPIC ESF + P +L CGHT+C+ C+ L + I + CP+C+
Sbjct: 16 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN----------GVRCPFCS 65
Query: 111 MVS 113
++
Sbjct: 66 KIT 68
>gi|153791514|ref|NP_001093149.1| E3 ubiquitin-protein ligase TRIM32 [Homo sapiens]
gi|153792582|ref|NP_036342.2| E3 ubiquitin-protein ligase TRIM32 [Homo sapiens]
gi|20178303|sp|Q13049.2|TRI32_HUMAN RecName: Full=E3 ubiquitin-protein ligase TRIM32; AltName: Full=72
kDa Tat-interacting protein; AltName: Full=Tripartite
motif-containing protein 32; AltName: Full=Zinc finger
protein HT2A
gi|13111963|gb|AAH03154.1| Tripartite motif-containing 32 [Homo sapiens]
gi|119607852|gb|EAW87446.1| tripartite motif-containing 32, isoform CRA_a [Homo sapiens]
gi|119607853|gb|EAW87447.1| tripartite motif-containing 32, isoform CRA_a [Homo sapiens]
gi|123992810|gb|ABM84007.1| tripartite motif-containing 32 [synthetic construct]
gi|123999596|gb|ABM87341.1| tripartite motif-containing 32 [synthetic construct]
gi|208968827|dbj|BAG74252.1| tripartite motif-containing protein 32 [synthetic construct]
Length = 653
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
E LECPIC ESF + P +L CGHT+C+ C+ L + I + CP+C+
Sbjct: 16 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN----------GVRCPFCS 65
Query: 111 MVS 113
++
Sbjct: 66 KIT 68
>gi|114626363|ref|XP_001156898.1| PREDICTED: E3 ubiquitin-protein ligase TRIM32 isoform 1 [Pan
troglodytes]
gi|397526437|ref|XP_003833131.1| PREDICTED: E3 ubiquitin-protein ligase TRIM32 [Pan paniscus]
gi|410043073|ref|XP_003951556.1| PREDICTED: E3 ubiquitin-protein ligase TRIM32 isoform 2 [Pan
troglodytes]
gi|410043075|ref|XP_003951557.1| PREDICTED: E3 ubiquitin-protein ligase TRIM32 isoform 3 [Pan
troglodytes]
gi|426362840|ref|XP_004048560.1| PREDICTED: E3 ubiquitin-protein ligase TRIM32 isoform 1 [Gorilla
gorilla gorilla]
gi|426362842|ref|XP_004048561.1| PREDICTED: E3 ubiquitin-protein ligase TRIM32 isoform 2 [Gorilla
gorilla gorilla]
gi|410214416|gb|JAA04427.1| tripartite motif-containing 32 [Pan troglodytes]
gi|410267430|gb|JAA21681.1| tripartite motif-containing 32 [Pan troglodytes]
gi|410288092|gb|JAA22646.1| tripartite motif-containing 32 [Pan troglodytes]
gi|410329983|gb|JAA33938.1| tripartite motif containing 32 [Pan troglodytes]
Length = 653
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
E LECPIC ESF + P +L CGHT+C+ C+ L + I + CP+C+
Sbjct: 16 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN----------GVRCPFCS 65
Query: 111 MVS 113
++
Sbjct: 66 KIT 68
>gi|344272010|ref|XP_003407829.1| PREDICTED: E3 ubiquitin-protein ligase TRIM32-like [Loxodonta
africana]
Length = 653
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
E LECPIC ESF + P +L CGHT+C+ C+ L + I + CP+C+
Sbjct: 16 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN----------GVRCPFCS 65
Query: 111 MVS 113
++
Sbjct: 66 KIT 68
>gi|413958203|dbj|BAM66375.1| tripartite motif 32 [Felis catus]
Length = 654
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
E LECPIC ESF + P +L CGHT+C+ C+ L + I + CP+C+
Sbjct: 17 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN----------GVRCPFCS 66
Query: 111 MVS 113
++
Sbjct: 67 KIT 69
>gi|348586267|ref|XP_003478890.1| PREDICTED: E3 ubiquitin-protein ligase TRIM32-like [Cavia
porcellus]
Length = 653
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
E LECPIC ESF + P +L CGHT+C+ C+ L + I + CP+C+
Sbjct: 16 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN----------GVRCPFCS 65
Query: 111 MVS 113
++
Sbjct: 66 KIT 68
>gi|281343699|gb|EFB19283.1| hypothetical protein PANDA_018308 [Ailuropoda melanoleuca]
Length = 652
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
E LECPIC ESF + P +L CGHT+C+ C+ L + I + CP+C+
Sbjct: 15 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN----------GVRCPFCS 64
Query: 111 MVS 113
++
Sbjct: 65 KIT 67
>gi|431900780|gb|ELK08221.1| Tripartite motif-containing protein 32 [Pteropus alecto]
Length = 653
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
E LECPIC ESF + P +L CGHT+C+ C+ L + I + CP+C+
Sbjct: 16 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN----------GVRCPFCS 65
Query: 111 MVS 113
++
Sbjct: 66 KIT 68
>gi|296190678|ref|XP_002806562.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM32
[Callithrix jacchus]
Length = 653
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
E LECPIC ESF + P +L CGHT+C+ C+ L + I + CP+C+
Sbjct: 16 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN----------GVRCPFCS 65
Query: 111 MVS 113
++
Sbjct: 66 KIT 68
>gi|58865776|ref|NP_001012103.1| E3 ubiquitin-protein ligase TRIM32 [Rattus norvegicus]
gi|51858707|gb|AAH81980.1| Tripartite motif protein 32 [Rattus norvegicus]
gi|60551553|gb|AAH91385.1| Tripartite motif protein 32 [Rattus norvegicus]
gi|149059569|gb|EDM10507.1| tripartite motif protein 32 [Rattus norvegicus]
Length = 655
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
E LECPIC ESF + P +L CGHT+C+ C+ L + I + CP+C+
Sbjct: 17 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN----------GVRCPFCS 66
Query: 111 MVS 113
++
Sbjct: 67 KIT 69
>gi|392891916|ref|NP_496525.2| Protein Y6D1A.2 [Caenorhabditis elegans]
gi|283483320|emb|CAB60579.2| Protein Y6D1A.2 [Caenorhabditis elegans]
Length = 250
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 39/84 (46%), Gaps = 20/84 (23%)
Query: 55 CPICWESF-NVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPF---FITCPWCN 110
C IC + + E +P VL CGHT+C C+ + + PT PF+ PF I N
Sbjct: 183 CEICSREYEDTKERVPRVLDCGHTICHECITRIHK-----PTEPFKCPFDRKIIEMDGRN 237
Query: 111 MVSLRLICKGNLKFPQKNYYLLWM 134
+ S FP KNY +L M
Sbjct: 238 VES----------FP-KNYTILQM 250
>gi|410978945|ref|XP_003995847.1| PREDICTED: E3 ubiquitin-protein ligase TRIM32 [Felis catus]
Length = 672
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
E LECPIC ESF + P +L CGHT+C+ C+ L + I + CP+C+
Sbjct: 35 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN----------GVRCPFCS 84
Query: 111 MVS 113
++
Sbjct: 85 KIT 87
>gi|239937489|ref|NP_444314.2| E3 ubiquitin-protein ligase TRIM32 [Mus musculus]
gi|239937491|ref|NP_001155254.1| E3 ubiquitin-protein ligase TRIM32 [Mus musculus]
gi|55976522|sp|Q8CH72.2|TRI32_MOUSE RecName: Full=E3 ubiquitin-protein ligase TRIM32; AltName:
Full=Tripartite motif-containing protein 32
gi|21706608|gb|AAH34104.1| Tripartite motif-containing 32 [Mus musculus]
gi|74147716|dbj|BAE38729.1| unnamed protein product [Mus musculus]
gi|74180308|dbj|BAE32325.1| unnamed protein product [Mus musculus]
gi|148699135|gb|EDL31082.1| tripartite motif protein 32, isoform CRA_b [Mus musculus]
Length = 655
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
E LECPIC ESF + P +L CGHT+C+ C+ L + I + CP+C+
Sbjct: 17 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN----------GVRCPFCS 66
Query: 111 MVS 113
++
Sbjct: 67 KIT 69
>gi|308467337|ref|XP_003095917.1| hypothetical protein CRE_07746 [Caenorhabditis remanei]
gi|308244288|gb|EFO88240.1| hypothetical protein CRE_07746 [Caenorhabditis remanei]
Length = 206
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 50/112 (44%), Gaps = 20/112 (17%)
Query: 30 KPSQVSSELSDDDASLNNSREEGL------ECPICWESFNVV-ENLPYVLWCGHTLCKNC 82
K + +L + L ++ E+GL ECP+C + F N+P VL CGHT C +C
Sbjct: 108 KAKETKQKLEERHKRLTDALEKGLDVKPWKECPVCLQEFGEEGHNIPKVLDCGHTFCLSC 167
Query: 83 VLGLQRAVIRLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWM 134
+ + P +I CP+ + V L K +L+ KNY M
Sbjct: 168 TKKIAK------------PGYIKCPF-DGVILIFKRKKDLEGHPKNYKCYAM 206
>gi|148699134|gb|EDL31081.1| tripartite motif protein 32, isoform CRA_a [Mus musculus]
Length = 666
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
E LECPIC ESF + P +L CGHT+C+ C+ L + I + CP+C+
Sbjct: 28 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN----------GVRCPFCS 77
Query: 111 MVS 113
++
Sbjct: 78 KIT 80
>gi|27436083|gb|AAO13297.1|AF347694_1 putative oncogene Trim32 [Mus musculus]
Length = 655
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
E LECPIC ESF + P +L CGHT+C+ C+ L + I + CP+C+
Sbjct: 17 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN----------GVRCPFCS 66
Query: 111 MVS 113
++
Sbjct: 67 KIT 69
>gi|301785928|ref|XP_002928379.1| PREDICTED: e3 ubiquitin-protein ligase TRIM32-like [Ailuropoda
melanoleuca]
Length = 655
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
E LECPIC ESF + P +L CGHT+C+ C+ L + I + CP+C+
Sbjct: 18 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN----------GVRCPFCS 67
Query: 111 MVS 113
++
Sbjct: 68 KIT 70
>gi|321478015|gb|EFX88973.1| hypothetical protein DAPPUDRAFT_12194 [Daphnia pulex]
Length = 449
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 23/38 (60%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC F+ V+ P L CGHTLCK C+ L R
Sbjct: 10 EFLSCPICRHEFDRVQRQPISLACGHTLCKTCLSKLHR 47
>gi|308500071|ref|XP_003112221.1| hypothetical protein CRE_29752 [Caenorhabditis remanei]
gi|308268702|gb|EFP12655.1| hypothetical protein CRE_29752 [Caenorhabditis remanei]
Length = 735
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Query: 55 CPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSL 114
C +C++ + +N P VL CGHT C CV+ P+ I CP C +S+
Sbjct: 60 CHVCYDDYETPKNQPRVLACGHTYCTRCVISCS-----APSEQHNSSIGIKCPECRKISI 114
Query: 115 R 115
+
Sbjct: 115 Q 115
>gi|449280515|gb|EMC87803.1| RING finger protein 222 [Columba livia]
Length = 238
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Query: 44 SLNNSREEGL--ECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLP 101
S +S +EGL ECP+C+E F+ +E + L CGH C +C++ + L Q+
Sbjct: 19 SETSSSKEGLPAECPVCYEKFHPLEAMRRQLSCGHIFCHDCLVKCLLSA----KLDGQVQ 74
Query: 102 FFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVE 136
I CP C V+ + K +P K W +E
Sbjct: 75 SSIICPICRYVT--FLSKKKALWPPKARTNSWTLE 107
>gi|341902415|gb|EGT58350.1| hypothetical protein CAEBREN_20131 [Caenorhabditis brenneri]
Length = 273
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 17/112 (15%)
Query: 35 SSELSDDDASLNNSREEGLECPICWESF--NVVENLPYVLW-CGHTLCKNCVLGLQRAVI 91
+E SD+D +S + LEC IC + F + P +L CGH+LC C+ L +
Sbjct: 175 DAEESDEDGEEIDSLKT-LECNICVKRFKGSSKRRTPRILTNCGHSLCHKCLETLSGS-- 231
Query: 92 RLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVESMNGDRS 143
F+ CP C + ++ G +K QKNY L ++E ++G ++
Sbjct: 232 ---------KGFVICPTC--MKKTVVPVGGVKMLQKNYIALGLLEEIDGKKA 272
>gi|168061471|ref|XP_001782712.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665805|gb|EDQ52477.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 264
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 23/112 (20%)
Query: 37 ELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVL------GLQRAV 90
EL S S + +CP+CW+ F+ +P +L CGHT+C+ C+ GL +
Sbjct: 5 ELVQRSQSKQKSSMQLPDCPVCWDGFDDGPRMPRLLHCGHTICQVCLQQLLFESGLGQRC 64
Query: 91 IRLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVESMNGDR 142
+R CP C V + +G + P KNY LL ++ S + +
Sbjct: 65 VR-------------CPECRGVC---VWRGLQELP-KNYILLRVISSSSTHK 99
>gi|341895871|gb|EGT51806.1| hypothetical protein CAEBREN_05785 [Caenorhabditis brenneri]
Length = 502
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 3/51 (5%)
Query: 41 DDASLNNSREEGLECPICWESFN--VVENLPYVL-WCGHTLCKNCVLGLQR 88
+D SL+NSR+ LEC +C+E ++ + ++P +L CGHTLC +C LQ+
Sbjct: 112 NDPSLSNSRQANLECKVCFEPYSDTIYNSIPLLLSECGHTLCHSCADTLQK 162
>gi|159163934|pdb|2CT2|A Chain A, Solution Structure Of The Ring Domain Of The Tripartite
Motif Protein 32
Length = 88
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
E LECPIC ESF + P +L CGHT+C+ C+ L + I + CP+C+
Sbjct: 14 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN----------GVRCPFCS 63
Query: 111 MVS 113
++
Sbjct: 64 KIT 66
>gi|341884781|gb|EGT40716.1| hypothetical protein CAEBREN_24309 [Caenorhabditis brenneri]
Length = 149
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 50 EEGLECPICWESFNVVEN---LPYVLWCGHTLCKNCVLGL-QRAVIRLPTLPF-QLPFFI 104
EE EC IC ++ +PY CGHT+CK CV L Q+ ++ P + P I
Sbjct: 56 EELSECKICTNQYDHHHGSNFVPYQFECGHTVCKTCVQELFQKRFEKIKPQPARETPMII 115
Query: 105 TCPWCNMV 112
CP+C V
Sbjct: 116 NCPFCKSV 123
>gi|341895920|gb|EGT51855.1| hypothetical protein CAEBREN_22010 [Caenorhabditis brenneri]
Length = 337
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 12/98 (12%)
Query: 46 NNSREEGLECPICWESFN--VVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFF 103
N R+EGLEC +C F+ + N+P +L CGHT+C +C LQ+ +
Sbjct: 4 NVQRKEGLECKVCMNPFSDSIGYNIPRMLDCGHTVCHSCAESLQKVASDKRS-------- 55
Query: 104 ITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVESMNGD 141
I CP+ V+ N++ ++NY ++ ++++ N +
Sbjct: 56 IRCPFDRHVTDGFY--ENVENLRRNYAIIDLIQARNEE 91
>gi|449500824|ref|XP_004161204.1| PREDICTED: uncharacterized LOC101212974, partial [Cucumis sativus]
Length = 741
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 19/75 (25%)
Query: 54 ECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVS 113
ECP+C ++++ +P VL CGH+ C C L LP + P I CP CN++
Sbjct: 5 ECPVCLQTYDGESIVPRVLSCGHSACGTC----------LENLPQRFPETIRCPACNVL- 53
Query: 114 LRLICKGNLKFPQKN 128
+KFP +
Sbjct: 54 --------VKFPSQG 60
>gi|156400090|ref|XP_001638833.1| predicted protein [Nematostella vectensis]
gi|156225957|gb|EDO46770.1| predicted protein [Nematostella vectensis]
Length = 406
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 9/96 (9%)
Query: 55 CPICWESFNVVENLPYVLWCGHTLCKNCV---LGLQRAVIR-LPTLPFQLP---FFITCP 107
C +C E FN +P +L C HTLCK CV LG R + R + ++ + CP
Sbjct: 17 CGVCQEEFNEKTRVPKLLHCSHTLCKACVSALLGGGRGMYREMNSILYGRANDHDSFKCP 76
Query: 108 WCNMVSLRLICKGNLKFPQKNYYLLWMVESMNGDRS 143
+CN + ++ +GN+ N +L +++ G+++
Sbjct: 77 FCN--ARQVTEQGNVDNLPNNLTILRLLDFTEGNQA 110
>gi|308486749|ref|XP_003105571.1| hypothetical protein CRE_22387 [Caenorhabditis remanei]
gi|308255537|gb|EFO99489.1| hypothetical protein CRE_22387 [Caenorhabditis remanei]
Length = 193
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPF 98
+ + C IC E+++ E LP VL CGHT+C C+ L+++ L + PF
Sbjct: 127 DAMSCGICLENYDNDEKLPKVLDCGHTICLVCLDSLEKSNGHLVSCPF 174
>gi|449459378|ref|XP_004147423.1| PREDICTED: uncharacterized protein LOC101212974 [Cucumis sativus]
Length = 761
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 19/75 (25%)
Query: 54 ECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVS 113
ECP+C ++++ +P VL CGH+ C C L LP + P I CP CN++
Sbjct: 5 ECPVCLQTYDGESIVPRVLSCGHSACGTC----------LENLPQRFPETIRCPACNVL- 53
Query: 114 LRLICKGNLKFPQKN 128
+KFP +
Sbjct: 54 --------VKFPSQG 60
>gi|390345220|ref|XP_003726288.1| PREDICTED: uncharacterized protein LOC100888142 [Strongylocentrotus
purpuratus]
Length = 901
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Query: 4 PIGNYFPSSLPVTAISGAIRLKNDALKPSQVSSELSDDDASLNNSRE---EGLECPICWE 60
P G PS+ P + A + + +S EL+ ++L++ + EGL+CP+C +
Sbjct: 257 PSGIAGPSNAPGPSTDTASSSILETFGDAALSQELTSSGSALSDEGDQCPEGLQCPLCLD 316
Query: 61 SFNVVENLPYVLWCGHTLCKNCV 83
+F P +L CGHT CK C+
Sbjct: 317 AFKN----PTLLACGHTFCKACL 335
>gi|440901636|gb|ELR52537.1| E3 ubiquitin-protein ligase TRIM32 [Bos grunniens mutus]
Length = 650
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 10/64 (15%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
E LECPIC ESF + P +L CGHT+C C+ L + I + CP+C+
Sbjct: 16 EVLECPICLESFTEEQLRPKLLHCGHTICCRCLEKLLASSIN----------GVRCPFCS 65
Query: 111 MVSL 114
++L
Sbjct: 66 KITL 69
>gi|115496330|ref|NP_001069292.1| E3 ubiquitin-protein ligase TRIM32 [Bos taurus]
gi|111308537|gb|AAI20074.1| Tripartite motif-containing 32 [Bos taurus]
gi|296484337|tpg|DAA26452.1| TPA: tripartite motif-containing 32 [Bos taurus]
Length = 653
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 10/64 (15%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
E LECPIC ESF + P +L CGHT+C C+ L + I + CP+C+
Sbjct: 16 EVLECPICLESFTEEQLRPKLLHCGHTICCRCLEKLLASSIN----------GVRCPFCS 65
Query: 111 MVSL 114
++L
Sbjct: 66 KITL 69
>gi|426222112|ref|XP_004005247.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM32
[Ovis aries]
Length = 574
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 10/68 (14%)
Query: 47 NSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITC 106
++ E LECPIC ESF + P +L CGHT+C C+ L + I + C
Sbjct: 12 DALREVLECPICMESFTEEQLRPKLLHCGHTICCQCLEKLLASSIN----------GVRC 61
Query: 107 PWCNMVSL 114
P+C+ ++L
Sbjct: 62 PFCSKITL 69
>gi|241741635|ref|XP_002414149.1| conserved hypothetical protein [Ixodes scapularis]
gi|215508003|gb|EEC17457.1| conserved hypothetical protein [Ixodes scapularis]
Length = 443
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 23/38 (60%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CP+C +F+ E P L CGHTLC C+ LQR
Sbjct: 10 EFLSCPVCCRAFDGAERRPTSLGCGHTLCGRCLGQLQR 47
>gi|356518567|ref|XP_003527950.1| PREDICTED: uncharacterized protein LOC100793437 [Glycine max]
Length = 1815
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 10/59 (16%)
Query: 54 ECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMV 112
ECP+C +SF+ + +P VL CGH++C+ C L LP + I CP C +
Sbjct: 5 ECPVCLQSFDERDAIPRVLSCGHSVCEAC----------LAELPQRYQDTIRCPACTQL 53
>gi|308480143|ref|XP_003102279.1| hypothetical protein CRE_05838 [Caenorhabditis remanei]
gi|308262205|gb|EFP06158.1| hypothetical protein CRE_05838 [Caenorhabditis remanei]
Length = 737
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 34/70 (48%), Gaps = 16/70 (22%)
Query: 53 LECPICWESFNVVEN--LPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
EC IC F V P VL CGHT+C +CV LQ+ +TCP+C
Sbjct: 670 FECEICALEFTDVGGNCTPKVLRCGHTICSSCVNSLQQ------------NNSVTCPFCR 717
Query: 111 MVSLRL--IC 118
+V+ +L IC
Sbjct: 718 VVTSKLAEIC 727
>gi|395505589|ref|XP_003757122.1| PREDICTED: E3 ubiquitin-protein ligase TRIM32 [Sarcophilus
harrisii]
Length = 647
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 14/87 (16%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
E LECPIC ESF P +L CGHT+C++C+ L I + CP+C+
Sbjct: 14 EVLECPICLESFTEEVLRPKLLHCGHTVCRHCLEKLLANTIN----------GVRCPFCS 63
Query: 111 MVSLRLICKGNLKFPQKNYYLLWMVES 137
V+ R+ NL N +L ++++
Sbjct: 64 KVT-RIT---NLSLLADNLTILKIIDT 86
>gi|341895880|gb|EGT51815.1| hypothetical protein CAEBREN_14855 [Caenorhabditis brenneri]
Length = 408
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 17/120 (14%)
Query: 27 DALKPSQVSSELS-DDDASLNNSREEGLECPICWESFN--VVENLPYVL-WCGHTLCKNC 82
D + P + S +L + +L++S++ LEC IC E ++ + N+P +L CGHTLC +C
Sbjct: 6 DEVTPIEHSGDLPFTRNTNLSHSKQVSLECKICNEEYSDTIYSNIPRILSGCGHTLCHSC 65
Query: 83 VLGLQRAVIRLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVESMNGDR 142
LQ + P + I CP+ R+ K + KN+ ++ ++ GD
Sbjct: 66 AETLQ---LMSPDI-----LSIDCPF-----DRITTKVKVDKLHKNFAIIELIMEKGGDE 112
>gi|301627586|ref|XP_002942955.1| PREDICTED: hypothetical protein LOC100497669 [Xenopus (Silurana)
tropicalis]
Length = 174
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 14/85 (16%)
Query: 27 DALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
DA+ P+ V+++L D S ++C IC+ S+N+ LP L+CGHT C+ C+
Sbjct: 20 DAIAPT-VTADLEKGDRSSRR-----IDCIICFSSYNLTHRLPRRLYCGHTFCQACLR-- 71
Query: 87 QRAVIRLPTLPFQLPFFITCPWCNM 111
RL TL + +I CP C
Sbjct: 72 -----RLDTLTNEQ-RWIPCPQCRQ 90
>gi|308480171|ref|XP_003102293.1| hypothetical protein CRE_05892 [Caenorhabditis remanei]
gi|308262219|gb|EFP06172.1| hypothetical protein CRE_05892 [Caenorhabditis remanei]
Length = 259
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 17/86 (19%)
Query: 33 QVSSELSDDDASLNNSREEGLECPICWESFNVV--ENLPYVLWCGHTLCKNCVLGLQRAV 90
+ E+ D A+ + +R EC IC + F + P VL CGHT+C +CV LQ+
Sbjct: 175 KARKEIEDSRAAHSQTR---FECEICLQQFTDIAGNRAPKVLRCGHTICSSCVNSLQQN- 230
Query: 91 IRLPTLPFQLPFFITCPWCNMVSLRL 116
+TCP+C +V+ L
Sbjct: 231 -----------NSVTCPFCRVVTSNL 245
>gi|193208549|ref|NP_506726.2| Protein T01G5.7 [Caenorhabditis elegans]
gi|169402815|emb|CAB03269.2| Protein T01G5.7 [Caenorhabditis elegans]
Length = 260
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 46 NNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPF-QLPFF 103
N +E ECPIC +++ + LP V+ CGHT+C C++ P PF + P F
Sbjct: 181 NAKQESRKECPICCWNYDNEDRLPRVMDCGHTMCHTCIISTINESDTEPICPFDREPMF 239
>gi|341878189|gb|EGT34124.1| hypothetical protein CAEBREN_00609 [Caenorhabditis brenneri]
Length = 316
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 5/88 (5%)
Query: 54 ECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVS 113
EC IC +++ +LP +L C HT+C C+ L+ R +I CP C
Sbjct: 20 ECRICTVAYDDNRHLPKILQCAHTICNACINVLEAEGRRRAGNMDMTQVYIVCPVC---- 75
Query: 114 LRLICKGNLKFPQKNYYLLWMVESMNGD 141
R++ + + NY L+ +V+ M G+
Sbjct: 76 -RMLTQAPRNSIRTNYQLIDVVDVMRGE 102
>gi|268563703|ref|XP_002638910.1| Hypothetical protein CBG22136 [Caenorhabditis briggsae]
Length = 306
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Query: 55 CPICWESFNVVENLPYVLWCGHTLCKNCVLGL-QRAVIRLPTLPFQLPFFITCPWCNMVS 113
C +C E ++ + P +L C HT+C++C+ L ++ R+P L Q ++CP C ++
Sbjct: 19 CQVCLEPYDGKLHTPKILQCAHTVCQSCMNALEEQGRRRVPNLE-QTMVSVSCPICRTIT 77
Query: 114 LRLICKGNLKFPQKNYYLLWMVESMNGDRSKS 145
C + NY L+ +VE+ D S S
Sbjct: 78 QTSRC-----CIRTNYQLIDVVEAYGIDASHS 104
>gi|126293989|ref|XP_001364618.1| PREDICTED: e3 ubiquitin-protein ligase TRIM32 [Monodelphis
domestica]
Length = 647
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 14/87 (16%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
E LECPIC ESF P +L CGHT+C++C+ L + I + CP+C+
Sbjct: 14 EVLECPICLESFTEDVLRPKLLHCGHTVCRHCLEKLLASSIN----------GVRCPFCS 63
Query: 111 MVSLRLICKGNLKFPQKNYYLLWMVES 137
++ R+ NL N +L ++++
Sbjct: 64 KIT-RIT---NLSLLADNLTILKIIDT 86
>gi|341898779|gb|EGT54714.1| hypothetical protein CAEBREN_20016 [Caenorhabditis brenneri]
Length = 143
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 54 ECPICWESFNVV--ENLPYVLWCGHTLCKNCVLGLQRA 89
ECPIC+E++++ E P +L CGHTLC C+ G+ A
Sbjct: 76 ECPICFETYSLARAETKPRILHCGHTLCNQCIRGMMAA 113
>gi|341898637|gb|EGT54572.1| hypothetical protein CAEBREN_03572 [Caenorhabditis brenneri]
Length = 620
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 37/88 (42%), Gaps = 22/88 (25%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
+ L C IC+E F + P L CGHT C C+ GL P + Q CP C
Sbjct: 270 DSLRCGICYEIF---DGSPQTLQCGHTFCSTCIKGL---TANRPNINMQ------CPICR 317
Query: 111 MVSLRLICKGNLKFPQKNYYLLWMVESM 138
N+ NY L+ ++ESM
Sbjct: 318 ----------NISKSSPNYTLIGILESM 335
>gi|341876693|gb|EGT32628.1| hypothetical protein CAEBREN_31129 [Caenorhabditis brenneri]
Length = 456
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 42/101 (41%), Gaps = 22/101 (21%)
Query: 55 CPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC----- 109
CP+C ++++ P + CGHT C C L L +P Q + CP C
Sbjct: 16 CPVCRDTYHPTRRCPIGVPCGHTFCSQCALTL---------IPAQSTPVVICPVCRKRHV 66
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMNG-----DRSKS 145
S GN K KN+ LL ++E DR+KS
Sbjct: 67 GQSSPGETIPGNFK---KNFSLLEVLEKFTETKQKLDRAKS 104
>gi|348542888|ref|XP_003458916.1| PREDICTED: RING finger protein 222-like [Oreochromis niloticus]
Length = 170
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 9/67 (13%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLP----FQLPFFITC 106
E LEC +C++++N P L C H+ C++C+L L R P P + I C
Sbjct: 4 EELECGVCYQTYNAGRRCPRELQCKHSFCESCLLALSR-----PLGPGEAHLEAGRLIVC 58
Query: 107 PWCNMVS 113
P C ++
Sbjct: 59 PLCRHIT 65
>gi|410904295|ref|XP_003965627.1| PREDICTED: RING finger and CCCH-type zinc finger
domain-containing protein 2-like [Takifugu rubripes]
Length = 1116
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 24/48 (50%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPF 98
E L CPIC+ F+ E+ P L C HT+CK C+ L R P
Sbjct: 10 EFLSCPICYNEFDSSEHQPISLGCSHTVCKTCLHKLHRKACPFDQTPI 57
>gi|9955545|emb|CAC05430.1| ankyrin-repeat containing protein [Arabidopsis thaliana]
Length = 834
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 12/86 (13%)
Query: 55 CPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSL 114
C +C +N E +P +L CGH CK+C+ + +TCP C VS
Sbjct: 10 CSVCHTRYNEDERVPLLLQCGHGFCKDCLSKM---------FSTSSDTTLTCPRCRHVS- 59
Query: 115 RLICKGNLKFPQKNYYLLWMVESMNG 140
+ +++ +KNY +L ++ + +G
Sbjct: 60 --VVGNSVQGLRKNYAMLALIHAASG 83
>gi|359492369|ref|XP_002284600.2| PREDICTED: uncharacterized protein LOC100248990 [Vitis vinifera]
Length = 1817
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 11/91 (12%)
Query: 54 ECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVS 113
ECP+C ++++ + +P VL CGHT C+ C+ LP + I CP C +
Sbjct: 7 ECPVCLQTYDTDQAIPRVLACGHTACEACI----------THLPQRFLDTIRCPACTQLV 56
Query: 114 LRLICKGNLKFPQKNYYLLWMVESMNGDRSK 144
+G P KN LL + S + D K
Sbjct: 57 KFSHLQGPSALP-KNIDLLRLCLSEDSDYQK 86
>gi|345325443|ref|XP_001515470.2| PREDICTED: E3 ubiquitin-protein ligase RFWD2-like [Ornithorhynchus
anatinus]
Length = 756
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
Query: 45 LNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFI 104
L N EE +E PIC F+++E Y+ CGH+ C C+ R P + + I
Sbjct: 151 LRNQGEEAVESPIC---FDMIEE-AYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVD-NI 205
Query: 105 TCPWCNMVSLRLICKGNLKFPQKNYYLLWMVESMNGDR 142
+ N + LI K +F +K + L V S NG R
Sbjct: 206 DHLYPNFLVNELILKQKQRFEEKRFKLDHSVSSTNGHR 243
>gi|344290478|ref|XP_003416965.1| PREDICTED: RING finger protein 222-like [Loxodonta africana]
Length = 220
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 44 SLNNSREE-GLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPF 102
S S+E G ECP+C+E F +E L CGHT C +C++ + + Q+
Sbjct: 2 SEGESKESSGSECPVCYEKFRDLEGASRTLSCGHTFCHDCLVKYLLST----QVDGQVQR 57
Query: 103 FITCPWCNMVSL 114
I CP C V+
Sbjct: 58 TIVCPICRYVTF 69
>gi|758423|gb|AAA86474.1| zinc-finger protein [Homo sapiens]
Length = 653
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 10/63 (15%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
E LECPIC ES + P +L CGHT+C+ C+ L + I + CP+C+
Sbjct: 16 EVLECPICMESITEEQLRPKLLHCGHTICRQCLEKLLASSIN----------GVRCPFCS 65
Query: 111 MVS 113
++
Sbjct: 66 KIT 68
>gi|341876660|gb|EGT32595.1| hypothetical protein CAEBREN_19523 [Caenorhabditis brenneri]
Length = 485
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 42/101 (41%), Gaps = 22/101 (21%)
Query: 55 CPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC----- 109
CP+C ++++ P + CGHT C C L L +P Q + CP C
Sbjct: 16 CPVCRDTYHPTRRCPIGVPCGHTFCSQCALTL---------IPAQSTPVVICPVCRKRHV 66
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMNG-----DRSKS 145
S GN K KN+ LL ++E DR+KS
Sbjct: 67 GQSSPGETIPGNFK---KNFSLLEVLEKFTETKQKLDRAKS 104
>gi|401411045|ref|XP_003884970.1| conserved hypothetical protein [Neospora caninum Liverpool]
gi|325119389|emb|CBZ54942.1| conserved hypothetical protein [Neospora caninum Liverpool]
Length = 812
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 31/53 (58%), Gaps = 7/53 (13%)
Query: 34 VSSELSD-DDASLNNSREEGLECPICWESFNVVE-NLPYVLWCGHTLCKNCVL 84
V+ E D DDAS G ECPIC E F E + P VL CGH++C +C+L
Sbjct: 12 VAREEDDPDDAS-----HAGHECPICLEKFECEEMHRPKVLTCGHSMCFSCIL 59
>gi|302679880|ref|XP_003029622.1| hypothetical protein SCHCODRAFT_236416 [Schizophyllum commune H4-8]
gi|300103312|gb|EFI94719.1| hypothetical protein SCHCODRAFT_236416 [Schizophyllum commune H4-8]
Length = 415
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 9/61 (14%)
Query: 54 ECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTL-------PFQLPFFITC 106
ECPIC+ESF ++E+ + + CGH +C C QR R PT PF+ F T
Sbjct: 5 ECPICFESFALLEDGVFFVACGHCICTEC--SRQRQWDRCPTCRTHAGIPPFRRIFVQTS 62
Query: 107 P 107
P
Sbjct: 63 P 63
>gi|327286392|ref|XP_003227914.1| PREDICTED: e3 ubiquitin-protein ligase TRIM32-like [Anolis
carolinensis]
Length = 650
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 10/68 (14%)
Query: 46 NNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFIT 105
+++ E LECPIC E F P +L CGHT+CK C L I I
Sbjct: 9 SDALREVLECPICMECFTEEHLRPKLLHCGHTICKQCSEKLLANSIN----------GIR 58
Query: 106 CPWCNMVS 113
CP+C+ V+
Sbjct: 59 CPFCSKVT 66
>gi|145518966|ref|XP_001445355.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124412799|emb|CAK77958.1| unnamed protein product [Paramecium tetraurelia]
Length = 653
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 50/104 (48%), Gaps = 17/104 (16%)
Query: 51 EGLECPICWESFNVVENLPYVL-WCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
E L CP C FN +NLP +L CGHT+C+NC+ Q+ +I +I CP
Sbjct: 5 EELICPECQMMFNESDNLPLMLPDCGHTICQNCI---QQMLINKK--------YIVCPED 53
Query: 110 NMVSLRLICKGNL-KFPQKNYYLLWMVESMNGDRSKSNPHFRGD 152
+++ K ++ +FP KN LL MV +S R D
Sbjct: 54 GIMAKN---KNDISQFP-KNCQLLKMVVKHKTQYQQSRQSARND 93
>gi|341893499|gb|EGT49434.1| hypothetical protein CAEBREN_03410 [Caenorhabditis brenneri]
Length = 594
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 18/59 (30%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
E LECP+C+ ++ EN+P +L CGH+ C +C+ L A TCP C
Sbjct: 500 ESLECPVCYRTY---ENMPRMLQCGHSFCNSCLNRLHNA---------------TCPIC 540
>gi|327288387|ref|XP_003228908.1| PREDICTED: phosphorylated CTD-interacting factor 1-like [Anolis
carolinensis]
Length = 860
Score = 44.3 bits (103), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 34/80 (42%)
Query: 32 SQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVI 91
SQ DD+ + EG EC IC++ F++ P L CGH C C+ + +
Sbjct: 581 SQRGDGWDADDSDAMSRSPEGPECQICYDRFDLRSRRPKRLLCGHCACARCLRRMAESAE 640
Query: 92 RLPTLPFQLPFFITCPWCNM 111
P ++CP+C
Sbjct: 641 WGALEALGSPARLSCPFCRQ 660
>gi|17538071|ref|NP_494242.1| Protein ZK1240.8 [Caenorhabditis elegans]
gi|351065654|emb|CCD61648.1| Protein ZK1240.8 [Caenorhabditis elegans]
Length = 292
Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 17/98 (17%)
Query: 53 LECPICWESFNVVEN--LPYVLWCGHTLCKNCVLGL-QRAVIRLPTLPFQLPFFITCPWC 109
EC +C E ++ ++ P VL CGH++C+NC + L +VI P C
Sbjct: 4 FECEVCNEDYSNLDESRAPRVLKCGHSICQNCAVKLISNSVILCPK---------KCSET 54
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMNGDRSKSNP 147
V GN++ QKN+ L+ +E M S S P
Sbjct: 55 TEVQ-----NGNVESLQKNFGLMQAMEMMEASSSNSPP 87
>gi|332833442|ref|XP_528658.3| PREDICTED: RING finger protein 208 [Pan troglodytes]
Length = 336
Score = 44.3 bits (103), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 8/64 (12%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
E LECP C S+NV + P VL C H++C+ C+ L + + FI+CP C
Sbjct: 214 EPLECPTCGHSYNVTQRRPRVLSCLHSVCEQCLQILYESCPKY--------KFISCPTCR 265
Query: 111 MVSL 114
++
Sbjct: 266 RETV 269
>gi|189240234|ref|XP_968546.2| PREDICTED: similar to AGAP007114-PA [Tribolium castaneum]
Length = 880
Score = 43.9 bits (102), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 14/90 (15%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRA---------VIRLPTLP---- 97
E L CP+C +F+V P L CGHT+CK C+ L R I + +LP
Sbjct: 10 EFLSCPVCCNAFDVALRSPISLGCGHTVCKACLSNLHRKQCPFDQTTISIDIESLPVNTA 69
Query: 98 -FQLPFFITCPWCNMVSLRLICKGNLKFPQ 126
QL + + V +++ + NL F Q
Sbjct: 70 LLQLVGPVIKKDDDAVDHKVVSRDNLAFYQ 99
>gi|443720821|gb|ELU10406.1| hypothetical protein CAPTEDRAFT_146794, partial [Capitella teleta]
gi|443730823|gb|ELU16175.1| hypothetical protein CAPTEDRAFT_97658, partial [Capitella teleta]
Length = 216
Score = 43.9 bits (102), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 41/102 (40%), Gaps = 17/102 (16%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC-NM 111
L C IC E+F + P +L C H+ CK C+L + R+ F+ CP C
Sbjct: 19 LTCSICMEAFGEGDRQPKLLPCHHSFCKQCLLQMARS-----------HSFVDCPTCRER 67
Query: 112 VSLRLICKGNLKFPQKNYYLLWMVE-----SMNGDRSKSNPH 148
L + Q N+Y+ M E S DRS H
Sbjct: 68 TPLPCPAPAGIHRLQTNFYVTQMQEILIDDSRRVDRSSCRKH 109
>gi|355716871|gb|AES05752.1| ring finger protein 208 [Mustela putorius furo]
Length = 263
Score = 43.9 bits (102), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 11/98 (11%)
Query: 12 SLPVTAISGAIRLKNDALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYV 71
P A + + + ++P SS A+ + E LECP C ++NV + P V
Sbjct: 106 GFPRVAPADEVIVNQYVIRPGPASS---GPPATAAPASGEPLECPTCGHTYNVTQRRPRV 162
Query: 72 LWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
L C H++C+ C+ L + + FI+CP C
Sbjct: 163 LSCLHSVCEQCLQILYESCPKY--------KFISCPTC 192
>gi|242215070|ref|XP_002473353.1| predicted protein [Postia placenta Mad-698-R]
gi|220727521|gb|EED81437.1| predicted protein [Postia placenta Mad-698-R]
Length = 542
Score = 43.9 bits (102), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 8/72 (11%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMV 112
EC IC E FNV + + + CGH C+ C+LG A I P I CP C M
Sbjct: 351 FECGICLEEFNV-DVVARIDICGHQFCRTCILGHTAAKIDERRYP------IVCPIC-MA 402
Query: 113 SLRLICKGNLKF 124
L +G+ ++
Sbjct: 403 DKGLKKQGDKQY 414
>gi|32564316|ref|NP_494241.2| Protein ZK1240.2 [Caenorhabditis elegans]
gi|351065650|emb|CCD61644.1| Protein ZK1240.2 [Caenorhabditis elegans]
Length = 340
Score = 43.9 bits (102), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 18/86 (20%)
Query: 53 LECPICWESFNVVE--NLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
++C IC E F+ + N+P +L CGHT C C L R I CP+C
Sbjct: 4 IDCEICDEEFSTLTDVNIPRILRCGHTTCHGCAEKLLRNST------------ILCPFCR 51
Query: 111 MVSLRLICKGNLKFPQKNYYLLWMVE 136
+ +K QKN+ LL VE
Sbjct: 52 EAT----NVSAVKDLQKNFALLQAVE 73
>gi|47212248|emb|CAF93161.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1067
Score = 43.5 bits (101), Expect = 0.096, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 24/47 (51%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLP 97
E L CPIC+ F+ E+ P L C HT+CK C+ L R P
Sbjct: 10 EFLSCPICYHEFDGGEHQPTSLGCSHTVCKTCLHKLHRKACPFDQTP 56
>gi|326671061|ref|XP_688313.3| PREDICTED: RING finger and CCCH-type zinc finger
domain-containing protein 2 [Danio rerio]
Length = 931
Score = 43.5 bits (101), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC+ F+ + P L C HT+CK C+ L R
Sbjct: 10 EFLSCPICYNEFDACSHKPISLGCSHTVCKTCLHKLHR 47
>gi|270012321|gb|EFA08769.1| hypothetical protein TcasGA2_TC006458 [Tribolium castaneum]
Length = 443
Score = 43.5 bits (101), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 23/38 (60%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CP+C +F+V P L CGHT+CK C+ L R
Sbjct: 10 EFLSCPVCCNAFDVALRSPISLGCGHTVCKACLSNLHR 47
>gi|308485310|ref|XP_003104854.1| hypothetical protein CRE_23993 [Caenorhabditis remanei]
gi|308257552|gb|EFP01505.1| hypothetical protein CRE_23993 [Caenorhabditis remanei]
Length = 294
Score = 43.5 bits (101), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 44/106 (41%), Gaps = 22/106 (20%)
Query: 55 CPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSL 114
C IC F+ P VL CGHT+C+ C L+ A P+L + CP C +
Sbjct: 15 CLICIREFDTKTRKPKVLHCGHTVCEECSENLKDA--NSPSLS------VRCPTCRQFTQ 66
Query: 115 RL---ICKGNLKFPQKNYYLLWMVESMNGDRS-------KSNPHFR 150
R+ C N + L E M +R+ K++ HF+
Sbjct: 67 RMQSQTCNTNFQL----MGYLAEKEKMERERTAKGEKVKKTDQHFQ 108
>gi|383853048|ref|XP_003702036.1| PREDICTED: RING finger and CCCH-type zinc finger
domain-containing protein 2-like [Megachile rotundata]
Length = 916
Score = 43.5 bits (101), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CP+C F+V P L CGHT+C+ C+ L R
Sbjct: 10 EFLSCPVCCHDFDVAVRGPISLGCGHTICRTCLANLHR 47
>gi|17505905|ref|NP_492366.1| Protein C36B1.9 [Caenorhabditis elegans]
gi|3874781|emb|CAB02274.1| Protein C36B1.9 [Caenorhabditis elegans]
Length = 674
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 6/103 (5%)
Query: 11 SSLPVTAISGAIRLKNDALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPY 70
+LP T + L+ D K +E+S D + + + C +C++ ++ N
Sbjct: 20 DTLPDTELPSLNVLEVDEPKEEIKKNEMSRIDI-IREAADNVQSCRVCYDEYHSSSNQAR 78
Query: 71 VLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVS 113
VL CGHT C CV+G + F I CP C ++
Sbjct: 79 VLQCGHTFCTRCVVGCSSTMNNTSE-----EFGIKCPECRKIN 116
>gi|186522588|ref|NP_196857.2| E3 ubiquitin-protein ligase KEG [Arabidopsis thaliana]
gi|218526495|sp|Q9FY48.2|KEG_ARATH RecName: Full=E3 ubiquitin-protein ligase KEG; AltName:
Full=Protein KEEP ON GOING; AltName: Full=RING finger
protein KEG
gi|83817349|gb|ABC46683.1| RING E3 ligase protein [Arabidopsis thaliana]
gi|332004525|gb|AED91908.1| E3 ubiquitin-protein ligase KEG [Arabidopsis thaliana]
Length = 1625
Score = 43.5 bits (101), Expect = 0.10, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 12/86 (13%)
Query: 55 CPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSL 114
C +C +N E +P +L CGH CK+C+ + +TCP C VS
Sbjct: 10 CSVCHTRYNEDERVPLLLQCGHGFCKDCLSKM---------FSTSSDTTLTCPRCRHVS- 59
Query: 115 RLICKGNLKFPQKNYYLLWMVESMNG 140
+ +++ +KNY +L ++ + +G
Sbjct: 60 --VVGNSVQGLRKNYAMLALIHAASG 83
>gi|334187662|ref|NP_001190303.1| E3 ubiquitin-protein ligase KEG [Arabidopsis thaliana]
gi|332004526|gb|AED91909.1| E3 ubiquitin-protein ligase KEG [Arabidopsis thaliana]
Length = 1624
Score = 43.5 bits (101), Expect = 0.11, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 12/86 (13%)
Query: 55 CPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSL 114
C +C +N E +P +L CGH CK+C+ + +TCP C VS
Sbjct: 10 CSVCHTRYNEDERVPLLLQCGHGFCKDCLSKM---------FSTSSDTTLTCPRCRHVS- 59
Query: 115 RLICKGNLKFPQKNYYLLWMVESMNG 140
+ +++ +KNY +L ++ + +G
Sbjct: 60 --VVGNSVQGLRKNYAMLALIHAASG 83
>gi|308498149|ref|XP_003111261.1| hypothetical protein CRE_03727 [Caenorhabditis remanei]
gi|308240809|gb|EFO84761.1| hypothetical protein CRE_03727 [Caenorhabditis remanei]
Length = 379
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%)
Query: 55 CPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
CPIC E F+ N+P VL CGH++C NC+ L +V + ++ ++CP C
Sbjct: 25 CPICKEEFDPKLNIPKVLNCGHSICVNCLKRLLESVQVSYSGNGEVFTSLSCPIC 79
>gi|410979573|ref|XP_003996157.1| PREDICTED: RING finger protein 208 [Felis catus]
Length = 265
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 8/71 (11%)
Query: 39 SDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPF 98
S A+ + E LECP C ++NV + P VL C H++C+ C+ L + +
Sbjct: 131 SGPPATAAPASGEPLECPTCGHTYNVTQRRPRVLSCLHSVCEQCLQILYESCPKY----- 185
Query: 99 QLPFFITCPWC 109
FI+CP C
Sbjct: 186 ---KFISCPTC 193
>gi|348574456|ref|XP_003473006.1| PREDICTED: hypothetical protein LOC100714864 [Cavia porcellus]
Length = 665
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 8/64 (12%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
E LECP C ++NV + P VL C H++C+ C+ L + + FI+CP C
Sbjct: 543 EPLECPTCGHTYNVTQRRPRVLSCLHSVCEQCLQILYESCPKY--------KFISCPTCR 594
Query: 111 MVSL 114
++
Sbjct: 595 RETV 598
>gi|348560945|ref|XP_003466273.1| PREDICTED: RING finger protein 222-like [Cavia porcellus]
Length = 215
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 52 GLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNM 111
G ECP+C+E F +E L CGH C +C++ + + Q+ I CP C
Sbjct: 11 GSECPVCYEKFRDLEGASRTLSCGHVFCHDCLVKYLLST----RVDGQVQRTIVCPICRY 66
Query: 112 VSLRLICKGNLKFP 125
V+ + K + ++P
Sbjct: 67 VT--FLSKKSSRWP 78
>gi|344251297|gb|EGW07401.1| RING finger protein 208 [Cricetulus griseus]
Length = 236
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 11/82 (13%)
Query: 29 LKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
++P +S S + E LECP C ++NV + P VL C H++C+ C+ L
Sbjct: 95 IRPGPTASAPSSSGPVIAG---EPLECPTCGHTYNVTQRRPRVLSCLHSVCEQCLQILYE 151
Query: 89 AVIRLPTLPFQLPFFITCPWCN 110
+ + FI+CP C+
Sbjct: 152 SCPKY--------KFISCPTCH 165
>gi|341895845|gb|EGT51780.1| hypothetical protein CAEBREN_05372 [Caenorhabditis brenneri]
Length = 977
Score = 43.5 bits (101), Expect = 0.11, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 8/59 (13%)
Query: 44 SLNNSREEGLECPICWESFN--VVENLPYVL-WCGHTLCKNCVLGLQ-----RAVIRLP 94
S +++REE +EC +C F+ + +N+P +L CGHT+C +C + +Q R VI P
Sbjct: 112 SESSAREESVECQVCLAPFSDHIEDNIPRILSACGHTICHSCAVNIQTMTSNRLVIACP 170
Score = 38.9 bits (89), Expect = 2.3, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 47 NSREEGLECPICWESFN--VVENLPYVL-WCGHTLCKNCVLGLQRAVIRLPTLPFQLPF 102
++ EE L+C +C F+ + +P +L CGHT+C C L LQ+ + L + PF
Sbjct: 616 SANEESLDCKVCLAPFSDHIAGKVPRILPACGHTICHTCALTLQK--LSTNKLSIRCPF 672
>gi|403335137|gb|EJY66741.1| Kelch motif family protein [Oxytricha trifallax]
gi|403376180|gb|EJY88072.1| Kelch motif family protein [Oxytricha trifallax]
Length = 751
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 24/36 (66%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
+ECP C+E F+ + +P L CGHT C+ C++ ++
Sbjct: 1 MECPSCYEYFDDITRVPRNLNCGHTFCEECLVKIEE 36
>gi|242223643|ref|XP_002477417.1| predicted protein [Postia placenta Mad-698-R]
gi|220723024|gb|EED77385.1| predicted protein [Postia placenta Mad-698-R]
Length = 385
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 8/72 (11%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMV 112
EC IC E FNV + + + CGH C+ C+LG A I P I CP C M
Sbjct: 194 FECGICLEEFNV-DVVARIDICGHQFCRTCILGHTAAKIDERRYP------IVCPIC-MA 245
Query: 113 SLRLICKGNLKF 124
L +G+ ++
Sbjct: 246 DKGLKKQGDKQY 257
>gi|17505504|ref|NP_491737.1| Protein C06A5.8, isoform a [Caenorhabditis elegans]
gi|351065259|emb|CCD61219.1| Protein C06A5.8, isoform a [Caenorhabditis elegans]
Length = 283
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 46/113 (40%), Gaps = 17/113 (15%)
Query: 32 SQVSSELSDDDASLNNSR-------------EEGLECPICWESFNVVENLPYVLWCGHTL 78
S SE+ D AS+ +S EE L+C +C ++N L L CGHT
Sbjct: 2 SATKSEMPADVASVTDSSAASPAFPLIGDFLEEFLKCQVCCTNYNETTKLARGLHCGHTF 61
Query: 79 CKNCVLGLQR----AVIRLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQK 127
C C+ +Q+ A + P+ + I N + LI K P+K
Sbjct: 62 CTECIKTMQKYGNSAYLECPSCRAETKCDIAAVSTNFAIMELIRKCGFLGPEK 114
>gi|326930176|ref|XP_003211227.1| PREDICTED: hypothetical protein LOC100547901 [Meleagris gallopavo]
Length = 257
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%)
Query: 30 KPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
KP + D + + + LEC IC+ S+++ LP L+CGHT C+ C+ L
Sbjct: 97 KPPKGHGHEDDGRSGCRSRGSQKLECIICYSSYDLCGRLPRRLYCGHTFCQACLKRL 153
>gi|301781536|ref|XP_002926170.1| PREDICTED: RING finger protein 208-like [Ailuropoda melanoleuca]
gi|281345338|gb|EFB20922.1| hypothetical protein PANDA_015801 [Ailuropoda melanoleuca]
Length = 267
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 8/71 (11%)
Query: 39 SDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPF 98
S A+ + E LECP C ++NV + P VL C H++C+ C+ L + +
Sbjct: 133 SGPPATAAPASGEPLECPTCGHTYNVTQRRPRVLSCLHSVCEQCLQILYESCPKY----- 187
Query: 99 QLPFFITCPWC 109
FI+CP C
Sbjct: 188 ---KFISCPTC 195
>gi|302785231|ref|XP_002974387.1| hypothetical protein SELMODRAFT_9033 [Selaginella moellendorffii]
gi|302807979|ref|XP_002985684.1| hypothetical protein SELMODRAFT_9032 [Selaginella moellendorffii]
gi|300146593|gb|EFJ13262.1| hypothetical protein SELMODRAFT_9032 [Selaginella moellendorffii]
gi|300157985|gb|EFJ24609.1| hypothetical protein SELMODRAFT_9033 [Selaginella moellendorffii]
Length = 67
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 43/80 (53%), Gaps = 13/80 (16%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMV 112
LECP+C E FN + P +L CGHT+C+ CV +R V+ LP F CP C +
Sbjct: 1 LECPVCLEFFNDGSHTPRLLCCGHTVCQLCV---ERLVVS-----SSLPRF-RCPECRAL 51
Query: 113 SLRLICKGNLKFPQKNYYLL 132
S +G FP KNY LL
Sbjct: 52 SKW---RGIHHFP-KNYILL 67
>gi|20988143|gb|AAH30073.1| Rnf208 protein [Mus musculus]
Length = 183
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 11/82 (13%)
Query: 29 LKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
++P +S S + E LECP C ++NV + P VL C H++C+ C+ L
Sbjct: 42 IRPGPTASAPSSSGPVIAG---EPLECPTCGHTYNVTQRRPRVLSCLHSVCEQCLQILYE 98
Query: 89 AVIRLPTLPFQLPFFITCPWCN 110
+ + FI+CP C+
Sbjct: 99 SCPKY--------KFISCPTCH 112
>gi|260835848|ref|XP_002612919.1| hypothetical protein BRAFLDRAFT_227863 [Branchiostoma floridae]
gi|229298301|gb|EEN68928.1| hypothetical protein BRAFLDRAFT_227863 [Branchiostoma floridae]
Length = 604
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
Query: 41 DDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCV--LGLQRAVIRLPTLPF 98
D +L REE L C +C E+F P VL C HT C+NC+ + + + R PT
Sbjct: 2 DTTNLQKIREELLSCGVCLETFTE----PRVLPCQHTFCQNCISKISADKRIFRCPTCRE 57
Query: 99 QL 100
Q+
Sbjct: 58 QV 59
>gi|170586816|ref|XP_001898175.1| Conserved hypothetical protein [Brugia malayi]
gi|158594570|gb|EDP33154.1| Conserved hypothetical protein, putative [Brugia malayi]
Length = 175
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 22/119 (18%)
Query: 41 DDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQL 100
DDA L CP+C F V + P++L CGH+ C+NC+ + +
Sbjct: 29 DDAERVAIDSSALHCPVC---FCVFASAPFILKCGHSFCQNCIKNIVEN-------SYSE 78
Query: 101 PFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVESM-----NGDRSKSNPHFRGDHQ 154
F CP C R + ++F +NY + +++S+ N + S +P+ R Q
Sbjct: 79 QIF-ECPMC-----RQVISSEIRFT-RNYIVDALLQSVCEIAENENESSVDPNLRISFQ 130
>gi|380019305|ref|XP_003693550.1| PREDICTED: roquin-like [Apis florea]
Length = 914
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CP+C F+V P L CGHT+C+ C+ L R
Sbjct: 10 EFLSCPVCCHDFDVAIRGPISLGCGHTICRTCLANLHR 47
>gi|354503358|ref|XP_003513748.1| PREDICTED: RING finger protein 208-like [Cricetulus griseus]
Length = 265
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 11/82 (13%)
Query: 29 LKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
++P +S S + E LECP C ++NV + P VL C H++C+ C+ L
Sbjct: 124 IRPGPTASAPSSSGPVIAG---EPLECPTCGHTYNVTQRRPRVLSCLHSVCEQCLQILYE 180
Query: 89 AVIRLPTLPFQLPFFITCPWCN 110
+ + FI+CP C+
Sbjct: 181 SCPKY--------KFISCPTCH 194
>gi|328790387|ref|XP_624874.2| PREDICTED: roquin isoform 2 [Apis mellifera]
Length = 909
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CP+C F+V P L CGHT+C+ C+ L R
Sbjct: 10 EFLSCPVCCHDFDVAIRGPISLGCGHTICRTCLANLHR 47
>gi|119395756|ref|NP_789804.2| RING finger protein 208 [Mus musculus]
gi|157822149|ref|NP_001102665.1| RING finger protein 208 [Rattus norvegicus]
gi|239938697|sp|Q8K0W3.2|RN208_MOUSE RecName: Full=RING finger protein 208
gi|148676271|gb|EDL08218.1| RIKEN cDNA 1110061N23 [Mus musculus]
gi|149039405|gb|EDL93625.1| rCG45886 [Rattus norvegicus]
Length = 265
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 11/82 (13%)
Query: 29 LKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
++P +S S + E LECP C ++NV + P VL C H++C+ C+ L
Sbjct: 124 IRPGPTASAPSSSGPVIAG---EPLECPTCGHTYNVTQRRPRVLSCLHSVCEQCLQILYE 180
Query: 89 AVIRLPTLPFQLPFFITCPWCN 110
+ + FI+CP C+
Sbjct: 181 SCPKY--------KFISCPTCH 194
>gi|340715688|ref|XP_003396341.1| PREDICTED: RING finger and CCCH-type zinc finger
domain-containing protein 2-like [Bombus terrestris]
Length = 911
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CP+C F+V P L CGHT+C+ C+ L R
Sbjct: 10 EFLSCPVCCHDFDVAIRGPISLGCGHTICRTCLANLHR 47
>gi|350417892|ref|XP_003491631.1| PREDICTED: roquin-like [Bombus impatiens]
Length = 911
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CP+C F+V P L CGHT+C+ C+ L R
Sbjct: 10 EFLSCPVCCHDFDVAIRGPISLGCGHTICRTCLANLHR 47
>gi|341895864|gb|EGT51799.1| hypothetical protein CAEBREN_06582 [Caenorhabditis brenneri]
Length = 446
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 16/102 (15%)
Query: 43 ASLNNSREEGLECPICWESFN--VVENLPYVL-WCGHTLCKNCVLGLQRAVIRLPTLPFQ 99
+SL++S++ +EC IC E ++ + +P +L CGHTLC +C +Q+ P Q
Sbjct: 119 SSLSHSKQASIECQICGEHYSDTISSRIPRILTECGHTLCHSCAETIQKMS------PDQ 172
Query: 100 LPFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVESMNGD 141
+ I CP R++ K ++ KN+ L+ ++ + +
Sbjct: 173 IS--IKCPI-----DRIVTKVKVEKLHKNFALIDLIRDRSDE 207
>gi|341893707|gb|EGT49642.1| hypothetical protein CAEBREN_14529 [Caenorhabditis brenneri]
Length = 586
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 52/110 (47%), Gaps = 25/110 (22%)
Query: 45 LNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFI 104
+N+ E LECPIC+ ++ +++P +L CGHT C C+ L +
Sbjct: 472 INDKIMECLECPICYRTY---KDIPRILHCGHTFCFECLNQLTN---------------L 513
Query: 105 TCPWCNMVSLRLICKGNLKFPQKNYYLLWMVESMNGDRSKSNPHFRGDHQ 154
CP+C + +G+ +NY L+ ++E+++ + + R ++
Sbjct: 514 KCPFC----CKAFARGS---ATQNYALMNVIEAVSPKSTDRSDRARNKYE 556
>gi|341895900|gb|EGT51835.1| hypothetical protein CAEBREN_24285 [Caenorhabditis brenneri]
Length = 352
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 18/89 (20%)
Query: 52 GLECPICWESFNVVE-NLPYVLWCGHTLCKNCVLGL--QRAVIRLPTLPFQLPFFITCPW 108
LEC +C+E ++ + ++P +L CGHT+C++C L + +IR P L +TC
Sbjct: 3 SLECKVCFEEYSEADGHIPRMLSCGHTICEDCAEKLLDDQWMIRCP-----LDRKMTC-- 55
Query: 109 CNMVSLRLICKGNLKFPQKNYYLLWMVES 137
+ G+++ KNY +L ++E
Sbjct: 56 --------VSSGDVRDLSKNYTVLEVLEE 76
>gi|443687940|gb|ELT90768.1| hypothetical protein CAPTEDRAFT_49606, partial [Capitella teleta]
Length = 159
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 41/102 (40%), Gaps = 17/102 (16%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC-NM 111
L C IC E+F + P +L C H+ CK C+L + R+ F+ CP C
Sbjct: 12 LTCSICMEAFGEGDRQPKLLPCHHSFCKQCLLQMARS-----------HSFVDCPTCRER 60
Query: 112 VSLRLICKGNLKFPQKNYYLLWMVE-----SMNGDRSKSNPH 148
L + Q N+Y+ M E S DRS H
Sbjct: 61 TPLPCPAPAGIHRLQTNFYVTQMQEILIDDSRRVDRSSCRKH 102
>gi|57092151|ref|XP_548354.1| PREDICTED: RING finger protein 208 [Canis lupus familiaris]
Length = 265
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 8/71 (11%)
Query: 39 SDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPF 98
S A+ + E LECP C ++NV + P VL C H++C+ C+ L + +
Sbjct: 131 SGAPATAAPASGEPLECPTCGHTYNVTQRRPRVLSCLHSVCEQCLQILYESCPKY----- 185
Query: 99 QLPFFITCPWC 109
FI+CP C
Sbjct: 186 ---KFISCPTC 193
>gi|432887980|ref|XP_004075007.1| PREDICTED: RING finger and CCCH-type zinc finger
domain-containing protein 2-like [Oryzias latipes]
Length = 1137
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 23/48 (47%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPF 98
E L CPIC+ F+ + P L C HT+CK C+ L R P
Sbjct: 10 EFLSCPICYNEFDSSSHQPISLGCSHTVCKTCLHKLHRKACPFDQTPI 57
>gi|16303800|gb|AAL16809.1|AF416715_1 unknown [Homo sapiens]
gi|12044469|emb|CAB66475.1| hypothetical protein [Homo sapiens]
gi|16877424|gb|AAH16958.1| RNF208 protein [Homo sapiens]
gi|117645914|emb|CAL38424.1| hypothetical protein [synthetic construct]
Length = 180
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 8/59 (13%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
E LECP C S+NV + P VL C H++C+ C+ L + + FI+CP C
Sbjct: 58 EPLECPTCGHSYNVTQRRPRVLSCLHSVCEQCLQILYESCPKY--------KFISCPTC 108
>gi|345484383|ref|XP_001603217.2| PREDICTED: RING finger and CCCH-type zinc finger
domain-containing protein 2-like isoform 1 [Nasonia
vitripennis]
gi|345484385|ref|XP_003425020.1| PREDICTED: RING finger and CCCH-type zinc finger
domain-containing protein 2-like isoform 2 [Nasonia
vitripennis]
Length = 921
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CP+C F+V P L CGHT+C+ C+ L R
Sbjct: 10 EFLSCPVCCHDFDVAIRGPISLGCGHTICRTCLANLHR 47
>gi|308505592|ref|XP_003114979.1| hypothetical protein CRE_28042 [Caenorhabditis remanei]
gi|308259161|gb|EFP03114.1| hypothetical protein CRE_28042 [Caenorhabditis remanei]
Length = 735
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 10/55 (18%)
Query: 55 CPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
C IC E + EN P V CGHT+C C+ L+ Q P I CP C
Sbjct: 290 CQICQEEYGD-ENHPVVTECGHTMCDKCIQNLKNQ---------QGPTTINCPTC 334
>gi|157818943|ref|NP_001102298.1| RING finger protein 222 [Rattus norvegicus]
gi|149053001|gb|EDM04818.1| rCG35065 [Rattus norvegicus]
Length = 211
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 52 GLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNM 111
G ECP+C+E F +E L CGH C +C++ + + Q+ I CP C
Sbjct: 11 GSECPVCYEKFRDLEGASRTLSCGHVFCHDCLVKYLLST----RVDGQVQRTIVCPICRY 66
Query: 112 VSL 114
V+
Sbjct: 67 VTF 69
>gi|332022378|gb|EGI62690.1| Roquin [Acromyrmex echinatior]
Length = 1028
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC F+V P L CGHT+C+ C+ L R
Sbjct: 52 EFLSCPICCHDFDVAIRGPISLGCGHTICRACLANLHR 89
>gi|119220603|ref|NP_112587.2| RING finger protein 208 [Homo sapiens]
gi|397492272|ref|XP_003817051.1| PREDICTED: RING finger protein 208 [Pan paniscus]
gi|426363716|ref|XP_004048980.1| PREDICTED: RING finger protein 208 [Gorilla gorilla gorilla]
gi|239938696|sp|Q9H0X6.2|RN208_HUMAN RecName: Full=RING finger protein 208
gi|410288800|gb|JAA23000.1| ring finger protein 208 [Pan troglodytes]
Length = 261
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 8/59 (13%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
E LECP C S+NV + P VL C H++C+ C+ L + + FI+CP C
Sbjct: 139 EPLECPTCGHSYNVTQRRPRVLSCLHSVCEQCLQILYESCPKY--------KFISCPTC 189
>gi|354469604|ref|XP_003497217.1| PREDICTED: RING finger protein 222-like [Cricetulus griseus]
gi|344237759|gb|EGV93862.1| RING finger protein 222 [Cricetulus griseus]
Length = 212
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 52 GLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNM 111
G ECP+C+E F +E L CGH C +C++ + + Q+ I CP C
Sbjct: 11 GSECPVCYEKFRDLEGASRTLSCGHVFCHDCLVKYLLST----RVDGQVQRTIVCPICRY 66
Query: 112 VSL 114
V+
Sbjct: 67 VTF 69
>gi|341899118|gb|EGT55053.1| hypothetical protein CAEBREN_16999 [Caenorhabditis brenneri]
Length = 320
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 45/102 (44%), Gaps = 21/102 (20%)
Query: 41 DDASLNNSREEGLECPICWESFNVVENLPYVLW-CGHTLCKNCVLGLQRAVIRLPTLPFQ 99
DD+ N C IC ++++ +P +L CGH+LC C L L
Sbjct: 177 DDSKFN--------CKICTQAYDTETRIPLMLRNCGHSLCTACATTL---------LSEN 219
Query: 100 LPFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVESMNGD 141
+I CP+C V+L +G F KNY +L +E M D
Sbjct: 220 KKQYIMCPFCQHVTL---VQGPAWFLPKNYTILEFLEDMPRD 258
>gi|148233940|ref|NP_001085077.1| E3 ubiquitin-protein ligase RNF182 [Xenopus laevis]
gi|82236748|sp|Q6INB3.1|RN182_XENLA RecName: Full=E3 ubiquitin-protein ligase RNF182; AltName:
Full=RING finger protein 182
gi|47940004|gb|AAH72370.1| MGC84499 protein [Xenopus laevis]
Length = 246
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 34 VSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
++S+LS+D++ N + LEC IC+ +N+ + P VL C H +C C+ L
Sbjct: 1 MTSQLSEDNSESPNLNSDELECKICYNRYNLRQRKPKVLGCCHRVCAKCLYKL 53
>gi|410906987|ref|XP_003966973.1| PREDICTED: RING finger protein 186-like [Takifugu rubripes]
Length = 118
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
LEC +C+ +FN P L C H+ C++C+L L R + P ITCP C
Sbjct: 5 LECGVCYRTFNAGRRCPRELRCHHSFCESCLLLLSRT-----QGSEEGPRSITCPLCR 57
>gi|341901319|gb|EGT57254.1| hypothetical protein CAEBREN_12231 [Caenorhabditis brenneri]
Length = 570
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
LEC +C F+ +++P +L CGHT C C+L ++R
Sbjct: 123 LECGVCCHDFDDKDHVPKMLSCGHTFCWQCILKIER 158
>gi|281343200|gb|EFB18784.1| hypothetical protein PANDA_010055 [Ailuropoda melanoleuca]
Length = 95
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 52 GLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNM 111
G ECP+C+E F +E L CGH C +C++ + + Q+ I CP C
Sbjct: 11 GSECPVCYEKFRDLEGASRTLSCGHVFCHDCLV----KYLLSTRVDGQVQRTIVCPVCRY 66
Query: 112 VSL 114
V+
Sbjct: 67 VTF 69
>gi|17543448|ref|NP_502615.1| Protein Y45F10B.8 [Caenorhabditis elegans]
gi|3880972|emb|CAA16351.1| Protein Y45F10B.8 [Caenorhabditis elegans]
Length = 244
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 16/90 (17%)
Query: 25 KNDALKPSQVSSELSDDDAS--------LNNSREEG--------LECPICWESFNVVENL 68
K++ LK + ++ DD+ S L SR E +EC IC+ S++ +
Sbjct: 130 KDEQLKTIRKEMKIMDDERSAFDQELTRLKTSRLENEKSSLASRVECTICYLSYDNEARV 189
Query: 69 PYVLWCGHTLCKNCVLGLQRAVIRLPTLPF 98
P V+ CGHT+C CV + P PF
Sbjct: 190 PRVMKCGHTICHTCVDRIIEQSFGSPKCPF 219
>gi|444712124|gb|ELW53055.1| RING finger protein 222 [Tupaia chinensis]
Length = 220
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 52 GLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNM 111
G ECP+C+E F +E L CGH C +C++ + + Q+ I CP C
Sbjct: 11 GSECPVCYEKFRDLEGASRTLSCGHVFCHDCLVKYLLST----RVDGQVQRTIVCPICRY 66
Query: 112 VSLRLICKGNLKFP 125
V+ + K + ++P
Sbjct: 67 VT--FLSKKSSRWP 78
>gi|341891468|gb|EGT47403.1| hypothetical protein CAEBREN_00878 [Caenorhabditis brenneri]
Length = 335
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 11/99 (11%)
Query: 54 ECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNM-- 111
EC IC +++ +LP +L C HT+C C+ L+ R +I CP C +
Sbjct: 20 ECRICTVAYDDNRHLPKILQCAHTICNACINVLEAEGRRRAGNMDMTQVYIVCPVCRVSN 79
Query: 112 ---------VSLRLICKGNLKFPQKNYYLLWMVESMNGD 141
V L+++ + + NY L+ +V+ M G+
Sbjct: 80 YPSCYHVIFVFLQMLTQAPRNSIRTNYQLIDVVDVMRGE 118
>gi|260786266|ref|XP_002588179.1| hypothetical protein BRAFLDRAFT_68819 [Branchiostoma floridae]
gi|229273338|gb|EEN44190.1| hypothetical protein BRAFLDRAFT_68819 [Branchiostoma floridae]
Length = 1290
Score = 42.7 bits (99), Expect = 0.17, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCV 83
L CPIC+ FN + P L CGHT+C+ C+
Sbjct: 12 LSCPICYNEFNENQRKPISLGCGHTVCQTCL 42
>gi|405124124|gb|AFR98886.1| hypothetical protein CNAG_05456 [Cryptococcus neoformans var.
grubii H99]
Length = 417
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 44/102 (43%), Gaps = 10/102 (9%)
Query: 6 GNYFPSSLPVTAISGAIR--LKNDALKPSQVSSELSDDDASLNNSRE--EGLECPICWES 61
G PSS+P+ S L ++K +E DD L+ S G CPIC+ +
Sbjct: 182 GRAVPSSIPIEISSDEEDELLGLRSVKAKSAETEKEDDGTGLDESSTLGTGYHCPICFNA 241
Query: 62 FNVVENLPYVLW-CGHTLCKNCVLGLQRAVIRLPTLPFQLPF 102
N P VL CGH LC C+ A IR P+ PF
Sbjct: 242 PN-----PAVLTPCGHILCAGCLHSSLLAAIRRNPNPYPNPF 278
>gi|50511255|dbj|BAD32613.1| mKIAA2025 protein [Mus musculus]
Length = 1136
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
L CPIC ++F+ P L CGHT+CK C+ L R
Sbjct: 18 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHR 53
>gi|68131569|ref|NP_001020123.1| probable E3 ubiquitin-protein ligase Roquin [Mus musculus]
gi|73621451|sp|Q4VGL6.1|RC3H1_MOUSE RecName: Full=Probable E3 ubiquitin-protein ligase Roquin;
AltName: Full=Protein Sanroque; AltName: Full=RING
finger and C3H zinc finger protein 1
gi|62836626|gb|AAY16368.1| roquin [Mus musculus]
gi|157170428|gb|AAI52932.1| RING CCCH (C3H) domains 1 [synthetic construct]
gi|187954319|gb|AAI38664.1| RING CCCH (C3H) domains 1 [Mus musculus]
Length = 1130
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
L CPIC ++F+ P L CGHT+CK C+ L R
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHR 47
>gi|350589009|ref|XP_003357594.2| PREDICTED: roquin [Sus scrofa]
Length = 1132
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
L CPIC ++F+ P L CGHT+CK C+ L R
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHR 47
>gi|308487419|ref|XP_003105905.1| hypothetical protein CRE_19662 [Caenorhabditis remanei]
gi|308254961|gb|EFO98913.1| hypothetical protein CRE_19662 [Caenorhabditis remanei]
Length = 335
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 24/120 (20%)
Query: 31 PSQVSSELSDD---DASLNNSREEGLECPIC--WESFNVVENLPYVLWCGHTLCKNCVLG 85
S +L D+ D N+ R L+C +C + ++ + +P +L CGHT+C C
Sbjct: 224 DSSDDEQLEDNECFDQEKNDLRYHDLKCGVCKLFYHESIKKRIPKMLSCGHTVCSGCAKM 283
Query: 86 LQRAVIRLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQ--KNYYLLWMVESMNGDRS 143
L + F I CP C K ++ + Q KNY LL +++ MN D+
Sbjct: 284 LHKVDY----------FCIQCPICRE-------KTDIDYIQLKKNYALLGIIQEMNQDKK 326
>gi|17543450|ref|NP_502624.1| Protein Y45F10B.9 [Caenorhabditis elegans]
gi|3880971|emb|CAA16350.1| Protein Y45F10B.9 [Caenorhabditis elegans]
Length = 244
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 16/90 (17%)
Query: 25 KNDALKPSQVSSELSDDDAS--------LNNSREEG--------LECPICWESFNVVENL 68
K++ LK + ++ DD+ S L SR E +EC IC+ S++ +
Sbjct: 130 KDEQLKTIRKEMKIMDDERSAFDQELTRLKTSRLENEKSSLASRVECTICYLSYDNEARV 189
Query: 69 PYVLWCGHTLCKNCVLGLQRAVIRLPTLPF 98
P V+ CGHT+C CV + P PF
Sbjct: 190 PRVMKCGHTICHTCVDRIIEQSFGSPKCPF 219
>gi|395825278|ref|XP_003785864.1| PREDICTED: roquin [Otolemur garnettii]
Length = 1036
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAV 90
L CPIC ++F+ P L CGHT+CK C+ L R
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKA 49
>gi|223460896|gb|AAI36785.1| Ring finger and CCCH-type zinc finger domains 1 [Homo sapiens]
Length = 1134
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAV 90
L CPIC ++F+ P L CGHT+CK C+ L R
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKA 49
>gi|73695473|ref|NP_742068.1| probable E3 ubiquitin-protein ligase Roquin [Homo sapiens]
gi|73621450|sp|Q5TC82.1|RC3H1_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase Roquin;
AltName: Full=RING finger and C3H zinc finger protein
1; AltName: Full=RING finger protein 198
Length = 1133
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAV 90
L CPIC ++F+ P L CGHT+CK C+ L R
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKA 49
>gi|348513879|ref|XP_003444468.1| PREDICTED: RING finger and CCCH-type zinc finger
domain-containing protein 2-like [Oreochromis
niloticus]
Length = 1126
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 23/48 (47%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPF 98
E L CPIC+ F+ + P L C HT+CK C+ L R P
Sbjct: 10 EFLSCPICYNEFDSSGHQPISLGCSHTVCKTCLHKLHRKACPFDQTPI 57
>gi|440910102|gb|ELR59930.1| Roquin [Bos grunniens mutus]
Length = 1139
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAV 90
L CPIC ++F+ P L CGHT+CK C+ L R
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKA 49
>gi|344309902|ref|XP_003423613.1| PREDICTED: RING finger protein 208-like, partial [Loxodonta
africana]
Length = 248
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 8/60 (13%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
E LECP C ++NV + P VL C H++C+ C+ L + + FI+CP C+
Sbjct: 126 EPLECPTCGHTYNVTQRRPRVLSCLHSVCEQCLQILYESCPKY--------KFISCPTCH 177
>gi|397508576|ref|XP_003824728.1| PREDICTED: roquin isoform 2 [Pan paniscus]
Length = 1134
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAV 90
L CPIC ++F+ P L CGHT+CK C+ L R
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKA 49
>gi|426356607|ref|XP_004045651.1| PREDICTED: tripartite motif-containing protein 73-like [Gorilla
gorilla gorilla]
Length = 250
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 23/94 (24%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
E+ L+CPIC E F P +L CGH+ CK C L +L + L + CP C
Sbjct: 11 EDRLQCPICLEVFKE----PLMLQCGHSYCKGC----------LGSLSYHLDTKLRCPMC 56
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMN--GD 141
V G+ P N L W++E++ GD
Sbjct: 57 WQVV-----DGSSSPP--NVSLAWVIEALRLPGD 83
>gi|426332788|ref|XP_004027976.1| PREDICTED: roquin [Gorilla gorilla gorilla]
Length = 1082
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
L CPIC ++F+ P L CGHT+CK C+ L R
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHR 47
>gi|390477095|ref|XP_002760397.2| PREDICTED: roquin isoform 4 [Callithrix jacchus]
Length = 1124
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAV 90
L CPIC ++F+ P L CGHT+CK C+ L R
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKA 49
>gi|291411490|ref|XP_002722012.1| PREDICTED: tripartite motif protein 50A [Oryctolagus cuniculus]
Length = 487
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%), Gaps = 4/39 (10%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E+ L+CPIC E F P +L CGH+ CK+C+L L R
Sbjct: 11 EDRLQCPICLEVFRE----PLMLQCGHSYCKDCLLALSR 45
>gi|332811232|ref|XP_001151649.2| PREDICTED: roquin isoform 1 [Pan troglodytes]
gi|410217834|gb|JAA06136.1| ring finger and CCCH-type domains 1 [Pan troglodytes]
gi|410259234|gb|JAA17583.1| ring finger and CCCH-type domains 1 [Pan troglodytes]
gi|410303180|gb|JAA30190.1| ring finger and CCCH-type domains 1 [Pan troglodytes]
gi|410337551|gb|JAA37722.1| ring finger and CCCH-type domains 1 [Pan troglodytes]
Length = 1133
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAV 90
L CPIC ++F+ P L CGHT+CK C+ L R
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKA 49
>gi|358416148|ref|XP_003583308.1| PREDICTED: roquin [Bos taurus]
Length = 1104
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAV 90
L CPIC ++F+ P L CGHT+CK C+ L R
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKA 49
>gi|344278501|ref|XP_003411032.1| PREDICTED: roquin [Loxodonta africana]
Length = 1104
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAV 90
L CPIC ++F+ P L CGHT+CK C+ L R
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKA 49
>gi|392352773|ref|XP_001057889.3| PREDICTED: roquin-like [Rattus norvegicus]
Length = 980
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
L CPIC ++F+ P L CGHT+CK C+ L R
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHR 47
>gi|351708493|gb|EHB11412.1| Roquin [Heterocephalus glaber]
Length = 393
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (64%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
L CPIC ++F+ P L CGHT+CK C+L L
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLLNL 45
>gi|242215415|ref|XP_002473523.1| predicted protein [Postia placenta Mad-698-R]
gi|220727363|gb|EED81284.1| predicted protein [Postia placenta Mad-698-R]
Length = 764
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 44/106 (41%), Gaps = 15/106 (14%)
Query: 26 NDALKPSQVSSELSDDDA-------SLNNSREEGLECPICWESFNVVENLPYVLWCGHTL 78
D + + E +DA +L ++ EC +C E FNV + + + CGH
Sbjct: 451 QDGAYAASMQREFDGEDARLKAQMTTLKHTAPGIFECGVCLEEFNV-DVVARIDICGHQF 509
Query: 79 CKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSLRLICKGNLKF 124
C+ C+LG A I P I CP C M L +G ++
Sbjct: 510 CRTCILGHTAAKIDERRYP------IVCPIC-MADKGLKKQGERQY 548
>gi|390356333|ref|XP_003728759.1| PREDICTED: tripartite motif-containing protein 2-like
[Strongylocentrotus purpuratus]
Length = 500
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 38/90 (42%), Gaps = 14/90 (15%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMV 112
LEC IC ++ N P +L C HT CK C+ L A + LP CP C
Sbjct: 9 LECSICLKTINE----PKLLTCSHTFCKACLERLSDAQVNRTVLP--------CPICKKT 56
Query: 113 SLRLICKGNLKFPQKNYYLLWMVESMNGDR 142
S + KG + Q L +V+ M R
Sbjct: 57 S--AVPKGEVGNLQTYQALKSVVDDMKNKR 84
>gi|390340193|ref|XP_003725189.1| PREDICTED: E3 ubiquitin-protein ligase TRIM50-like
[Strongylocentrotus purpuratus]
Length = 346
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 12/60 (20%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
E L CP+C ++F V P +L+CGHT CK C+ ++ F+ CP C
Sbjct: 11 ESLACPLCLDAFKV----PTLLFCGHTFCKVCLDKYD--------THYRGQDFMECPVCK 58
>gi|296201292|ref|XP_002747974.1| PREDICTED: RING finger protein 222 [Callithrix jacchus]
Length = 220
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 52 GLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNM 111
G ECP+C+E F +E L CGH C +C++ + + Q+ + CP C
Sbjct: 11 GSECPVCYEKFRDLEGASRTLSCGHVFCHDCLVKYLLST----RVDGQVQRILVCPICRY 66
Query: 112 VSL 114
V+
Sbjct: 67 VTF 69
>gi|119611378|gb|EAW90972.1| ring finger and CCCH-type zinc finger domains 1 [Homo sapiens]
Length = 955
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
L CPIC ++F+ P L CGHT+CK C+ L R
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHR 47
>gi|321471264|gb|EFX82237.1| hypothetical protein DAPPUDRAFT_302642 [Daphnia pulex]
Length = 343
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 16/77 (20%)
Query: 34 VSSELS-DDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIR 92
+SS +S DDD + E ++C IC +N ++ P L C HTLC C+ + +
Sbjct: 3 ISSSMSLDDDEDI----AEFVKCRICLREYNEIDRKPKFLPCSHTLCFECIYNISQGYD- 57
Query: 93 LPTLPFQLPFFITCPWC 109
ITCP+C
Sbjct: 58 ----------IITCPFC 64
>gi|148231629|ref|NP_001087361.1| ring finger protein 182 [Xenopus laevis]
gi|51593523|gb|AAH78617.1| MGC85578 protein [Xenopus laevis]
Length = 246
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 48/114 (42%), Gaps = 8/114 (7%)
Query: 34 VSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRL 93
++ +L++D++ N E LEC IC+ +N+ + P VL C H +C C+ +L
Sbjct: 1 MTGQLTEDNSESPNLNSEELECKICYNRYNLRQRKPKVLGCCHRVCAKCLY-------KL 53
Query: 94 PTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVESMNGDRSKSNP 147
I CP+C + RL P N LL + G NP
Sbjct: 54 VDCGESAQCVIVCPFCRFET-RLPEDEVSSLPDDNNILLNLACGGRGKCVGDNP 106
>gi|308478449|ref|XP_003101436.1| hypothetical protein CRE_13445 [Caenorhabditis remanei]
gi|308263337|gb|EFP07290.1| hypothetical protein CRE_13445 [Caenorhabditis remanei]
Length = 323
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 15/128 (11%)
Query: 11 SSLPVTAISGAIRLKNDALKPSQVSSELSDDDASLNNSREEGLECPICWESFN--VVENL 68
S++ T G +R + + VS D+ E G EC IC ++ V ++
Sbjct: 207 STVMKTGEVGTMR-ELRSFDGDGVSYTSVDETGESALMSETGAECEICLMKYDGAVEKHT 265
Query: 69 PYVLW-CGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQK 127
P +L CGHT+C+ C+ L L + + CP+C V+ ++ G++ + K
Sbjct: 266 PRILIKCGHTMCQGCIGNL---------LEYNSHQEVCCPFCQQVT--VVNGGSVSYLPK 314
Query: 128 NYYLLWMV 135
NY +L ++
Sbjct: 315 NYGMLKLI 322
>gi|189521260|ref|XP_001336650.2| PREDICTED: hypothetical protein LOC100000253 [Danio rerio]
Length = 201
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 36 SELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPT 95
SE A +ECP+C++ ++ LP +L C H C C+ +Q + P
Sbjct: 2 SETQSTSAQTEVPESPEVECPVCYQEYDQHSKLPRMLECLHVFCTECLRKIQLTPLHPPD 61
Query: 96 LPFQLPFFITCPWCN 110
P P I+CP C
Sbjct: 62 -PDSAP-SISCPLCR 74
>gi|156365078|ref|XP_001626669.1| predicted protein [Nematostella vectensis]
gi|156213554|gb|EDO34569.1| predicted protein [Nematostella vectensis]
Length = 457
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC+ F + P L CGHT+CK C+ L +
Sbjct: 10 EFLTCPICYHEFEDRQRGPISLACGHTICKACLSQLHK 47
>gi|405962355|gb|EKC28045.1| Tripartite motif-containing protein 3 [Crassostrea gigas]
Length = 504
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 12/62 (19%)
Query: 48 SREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCP 107
+ + G +C IC +SF P +L C HT CK CVLG QR ++ CP
Sbjct: 8 TNDNGRQCSICLDSFRC----PKILPCKHTFCKRCVLGYQRE--------YESDDEFRCP 55
Query: 108 WC 109
C
Sbjct: 56 LC 57
>gi|296191252|ref|XP_002806587.1| PREDICTED: LOW QUALITY PROTEIN: RING finger protein 208 [Callithrix
jacchus]
Length = 261
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 8/59 (13%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
E LECP C ++NV + P VL C H++C+ C+ L + + FI+CP C
Sbjct: 139 EPLECPTCGHTYNVTQRRPRVLSCLHSVCEQCLQILYESCPKY--------KFISCPTC 189
>gi|125854139|ref|XP_001344050.1| PREDICTED: hypothetical protein LOC100004848 [Danio rerio]
Length = 621
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 46/116 (39%), Gaps = 27/116 (23%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
EEGL CPIC E F P +L C H+ C+ C+ R CP C
Sbjct: 8 EEGLSCPICSEIFKT----PVLLSCSHSFCRQCLQQFWRNTESQ-----------NCPVC 52
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMNGDRSKSNPHFRGDHQPASSLNRNSAV 165
S +L P N L + ES+ GD+ G ++ +S+ R S +
Sbjct: 53 RRRSSKLK-------PPVNLALQNLCESIQGDKKG-----EGKYEKSSNKARKSKI 96
>gi|431894049|gb|ELK03855.1| RING finger protein 222 [Pteropus alecto]
Length = 211
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 52 GLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNM 111
G ECP+C+E F +E L CGH C +C++ + + Q+ I CP C
Sbjct: 11 GSECPVCYEKFRDLEGASRTLSCGHVFCHDCLVKYLLST----RVDGQVQRTIVCPICRY 66
Query: 112 VSL 114
V+
Sbjct: 67 VTF 69
>gi|195145575|ref|XP_002013767.1| GL24317 [Drosophila persimilis]
gi|194102710|gb|EDW24753.1| GL24317 [Drosophila persimilis]
Length = 151
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 9/83 (10%)
Query: 16 TAISGAIRLKNDALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCG 75
TA +G + PS+ + +D + SL EE CPIC ES + E P CG
Sbjct: 63 TATTGPTASDAEVSGPSRPKRKRTDPNESL----EETYSCPICLESVSGRE--PVATECG 116
Query: 76 HTLCKNCVLGLQRAVIRLPTLPF 98
H C+ C+ A++ P P
Sbjct: 117 HIFCRQCI---DTAILHNPKCPM 136
>gi|291229556|ref|XP_002734741.1| PREDICTED: membrane associated DNA binding protein-like
[Saccoglossus kowalevskii]
Length = 440
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 23/38 (60%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC+ F+ LP L CGHT+C+ C+ L R
Sbjct: 10 EFLLCPICYNDFDDNVRLPISLVCGHTVCRTCLAQLHR 47
>gi|355568231|gb|EHH24512.1| RING finger protein 222 [Macaca mulatta]
Length = 220
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 52 GLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNM 111
G ECP+C+E F +E L CGH C +C++ + + Q+ + CP C
Sbjct: 11 GSECPVCYEKFRDLEGASRTLSCGHVFCHDCLVKYLLST----RVDGQVQRILVCPICRY 66
Query: 112 VSLRLICKGNLKFP 125
V+ + K + ++P
Sbjct: 67 VT--FLSKKSSRWP 78
>gi|344237190|gb|EGV93293.1| Roquin [Cricetulus griseus]
Length = 1418
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
L CPIC ++F+ P L CGHT+CK C+ L R
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHR 47
>gi|359074115|ref|XP_003587130.1| PREDICTED: roquin [Bos taurus]
gi|296479059|tpg|DAA21174.1| TPA: hypothetical protein BOS_15973 [Bos taurus]
Length = 736
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
L CPIC ++F+ P L CGHT+CK C+ L R
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHR 47
>gi|351705279|gb|EHB08198.1| RING finger protein 208 [Heterocephalus glaber]
Length = 251
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 8/59 (13%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
E LECP C ++NV + P VL C H++C+ C+ L + + FI+CP C
Sbjct: 129 EPLECPTCGHTYNVTQRRPRVLSCLHSVCEQCLQILYESCPKY--------KFISCPTC 179
>gi|308480157|ref|XP_003102286.1| hypothetical protein CRE_05839 [Caenorhabditis remanei]
gi|308262212|gb|EFP06165.1| hypothetical protein CRE_05839 [Caenorhabditis remanei]
Length = 356
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 19/79 (24%)
Query: 42 DASLNNSREEGL-----ECPICWESFNVVEN--LPYVLWCGHTLCKNCVLGLQRAVIRLP 94
D +LN +G+ EC IC + F V P VL CGHT+C +CV L++
Sbjct: 273 DITLNYEGGQGMKATRFECEICLQQFTDVAGNCAPKVLRCGHTICASCVNSLKQ------ 326
Query: 95 TLPFQLPFFITCPWCNMVS 113
+TCP+C +V+
Sbjct: 327 ------NNSVTCPFCRVVT 339
>gi|302563981|ref|NP_001181514.1| RING finger protein 222 [Macaca mulatta]
Length = 220
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 52 GLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNM 111
G ECP+C+E F +E L CGH C +C++ + + Q+ + CP C
Sbjct: 11 GSECPVCYEKFRDLEGASRTLSCGHVFCHDCLVKYLLST----RVDGQVQRILVCPICRY 66
Query: 112 VSLRLICKGNLKFP 125
V+ + K + ++P
Sbjct: 67 VT--FLSKKSSRWP 78
>gi|390355820|ref|XP_003728633.1| PREDICTED: uncharacterized protein LOC585395 [Strongylocentrotus
purpuratus]
Length = 619
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 38/90 (42%), Gaps = 14/90 (15%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMV 112
LEC IC ++ N P +L C HT CK C+ L A + LP CP C
Sbjct: 9 LECSICLKTINE----PKLLTCSHTFCKACLERLSDAQVNRTVLP--------CPICKKT 56
Query: 113 SLRLICKGNLKFPQKNYYLLWMVESMNGDR 142
S + KG + Q L +V+ M R
Sbjct: 57 S--AVPKGEVGNLQTYQALKSVVDDMKNKR 84
>gi|405978709|gb|EKC43078.1| Tripartite motif-containing protein 45 [Crassostrea gigas]
Length = 633
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 8/62 (12%)
Query: 48 SREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCP 107
+ EE CPIC+ESF P +L C HT C NC+ + + P P CP
Sbjct: 12 TTEETTTCPICFESFLT----PRILPCSHTFCHNCLSSYIISTCKTKESPVGFP----CP 63
Query: 108 WC 109
C
Sbjct: 64 LC 65
>gi|313239853|emb|CBY14702.1| unnamed protein product [Oikopleura dioica]
Length = 236
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 32 SQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVI 91
S+ S L + +L N+R +C IC+E ++ V+ L VL CGH C+ C+ L +
Sbjct: 162 SEKSDMLFEKKENLENAR---FKCNICFEKYDDVDRLQCVLQCGHPACEKCLTALPNKLC 218
Query: 92 RLPTLPFQ 99
+ PF+
Sbjct: 219 PICRKPFK 226
>gi|308498888|ref|XP_003111630.1| hypothetical protein CRE_02954 [Caenorhabditis remanei]
gi|308239539|gb|EFO83491.1| hypothetical protein CRE_02954 [Caenorhabditis remanei]
Length = 345
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 14/99 (14%)
Query: 43 ASLNNSREEGLECPICWESFN--VVENLPYVL-WCGHTLCKNCVLGLQRAVIRLPTLPFQ 99
+ NN R + L C IC ++N N P +L CGHT+C++CV L+R +P
Sbjct: 250 SKFNNFRCDELVCQICLRNYNEKTKRNSPKILTGCGHTVCQHCVRKLKRKT-HFDCIP-- 306
Query: 100 LPFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVESM 138
CP+C V +L + P KNY ++ M+ +
Sbjct: 307 ------CPFCT-VDTKLNGRSVDYLP-KNYAIIGMIRKL 337
>gi|395836422|ref|XP_003791155.1| PREDICTED: RING finger protein 222 [Otolemur garnettii]
Length = 220
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 52 GLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNM 111
G ECP+C+E F +E L CGH C +C++ + + Q+ I CP C
Sbjct: 11 GSECPVCYEKFRDLEGTSRTLSCGHVFCHDCLVKYLLST----RVDGQVQRTIICPICRY 66
Query: 112 VSL 114
V+
Sbjct: 67 VTF 69
>gi|156357582|ref|XP_001624295.1| predicted protein [Nematostella vectensis]
gi|156211063|gb|EDO32195.1| predicted protein [Nematostella vectensis]
Length = 537
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 14/101 (13%)
Query: 44 SLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFF 103
S + + ++ + CPIC+E F + LP C H +C+ C+LG+ QL F
Sbjct: 14 SFHENIQDEISCPICYEDFEEPKCLPK---CAHNICRECLLGIIEKA--------QLERF 62
Query: 104 ITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVESMNGDRSK 144
CP C + + + G FP N L+ +VE+ G + K
Sbjct: 63 -ECPICRAI-VAVPKDGIDGFPT-NSLLVRLVENAPGRKEK 100
>gi|403275050|ref|XP_003929273.1| PREDICTED: RING finger protein 222 [Saimiri boliviensis
boliviensis]
Length = 234
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 52 GLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNM 111
G ECP+C+E F +E L CGH C +C++ + + Q+ + CP C
Sbjct: 25 GSECPVCYEKFRDLEGASRTLSCGHVFCHDCLVKYLLST----RVDGQVQRILVCPICRY 80
Query: 112 VSLRLICKGNLKFP 125
V+ + K + ++P
Sbjct: 81 VT--FLSKKSSRWP 92
>gi|383872608|ref|NP_001244584.1| RING finger protein 208 [Macaca mulatta]
gi|380786659|gb|AFE65205.1| RING finger protein 208 [Macaca mulatta]
gi|384940968|gb|AFI34089.1| RING finger protein 208 [Macaca mulatta]
Length = 261
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 8/59 (13%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
E LECP C ++NV + P VL C H++C+ C+ L + + FI+CP C
Sbjct: 139 EPLECPTCGHTYNVTQRRPRVLSCLHSVCEQCLQILYESCPKY--------KFISCPTC 189
>gi|432910810|ref|XP_004078536.1| PREDICTED: RING finger protein 183-like [Oryzias latipes]
Length = 299
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 8/63 (12%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
E EC IC+ S++ + P VL CGHT C C+ + L LP CP C
Sbjct: 93 EDTECSICFCSYDNIFKTPKVLACGHTFCLECLARINVTSAELKNLP--------CPVCR 144
Query: 111 MVS 113
V+
Sbjct: 145 EVT 147
>gi|432931345|ref|XP_004081666.1| PREDICTED: RING finger protein 17-like [Oryzias latipes]
Length = 1490
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 48/120 (40%), Gaps = 19/120 (15%)
Query: 46 NNSREEGLECPICWESFNVVEN-----LPYVLWCGHTLCKNCVLGLQRA-VIRLP----- 94
N C +C E F + EN LP +L CGH C NC+L +Q VIR P
Sbjct: 3 KNGSARDTACKLCKERFKLPENEDEGNLPRILACGHIYCTNCLLSIQSDNVIRCPGCQEE 62
Query: 95 -TLPFQLPF-------FITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVESMNGDRSKSN 146
TLP F I + ++ K L+ Q+N E GD +K++
Sbjct: 63 STLPAGGVFGLQEESSIIGVIYTAKINESYRRKNKLQESQENKMKEDETEKQAGDTAKAD 122
>gi|268560772|ref|XP_002646287.1| Hypothetical protein CBG11992 [Caenorhabditis briggsae]
Length = 437
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 8/86 (9%)
Query: 55 CPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPF---QLPFFITCPWCNM 111
C IC E F+ +LP VL CGHT C++C L +A+ + + + CP C
Sbjct: 25 CSICMEEFDSNIHLPKVLKCGHTFCRSC---LDKAISSVQVSHYGGGDVNTLFFCPLCRR 81
Query: 112 VSLRLICKGNLKFPQKNYYLLWMVES 137
S + G FP N+ LL +V S
Sbjct: 82 -SEEIPNTGASDFP-NNHQLLDVVAS 105
>gi|324511099|gb|ADY44631.1| E3 ubiquitin-protein ligase TRIM13 [Ascaris suum]
Length = 386
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 12/73 (16%)
Query: 45 LNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLP--------TL 96
+N + E +ECP+C + F P L CGH+LC +CV L ++P
Sbjct: 9 VNENISEAMECPVCTQIFE----QPRQLHCGHSLCAHCVERLVELRRQMPPVRGLGGIAT 64
Query: 97 PFQLPFFITCPWC 109
P I+CP C
Sbjct: 65 SSSYPVTISCPVC 77
>gi|195054038|ref|XP_001993933.1| GH22295 [Drosophila grimshawi]
gi|193895803|gb|EDV94669.1| GH22295 [Drosophila grimshawi]
Length = 202
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 46 NNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLP 94
N S EE +CP+C ES V++ P CGH CK C+ + A + P
Sbjct: 140 NTSVEEPYKCPVCLES--VLKKEPSSTRCGHIFCKICIQAAEHATHKCP 186
>gi|403301420|ref|XP_003941388.1| PREDICTED: RING finger protein 208 [Saimiri boliviensis
boliviensis]
Length = 261
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 8/59 (13%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
E LECP C ++NV + P VL C H++C+ C+ L + + FI+CP C
Sbjct: 139 EPLECPTCGHTYNVTQRRPRVLSCLHSVCEQCLQILYESCPKY--------KFISCPTC 189
>gi|297685823|ref|XP_002820473.1| PREDICTED: RING finger protein 208 [Pongo abelii]
Length = 261
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 8/59 (13%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
E LECP C ++NV + P VL C H++C+ C+ L + + FI+CP C
Sbjct: 139 EPLECPTCGHTYNVTQRRPRVLSCLHSVCEQCLQILYESCPKY--------KFISCPTC 189
>gi|242022302|ref|XP_002431579.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212516887|gb|EEB18841.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 680
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CP+C F+ P L CGH++C+ C+ L R
Sbjct: 10 EFLSCPVCCNGFDTESRGPVTLGCGHSICRGCLTSLHR 47
>gi|195435912|ref|XP_002065922.1| GK20807 [Drosophila willistoni]
gi|194162007|gb|EDW76908.1| GK20807 [Drosophila willistoni]
Length = 889
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 10/74 (13%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFIT----CPW 108
L CPIC + F + P L CGHT+CK C+ L PF + +T P
Sbjct: 12 LNCPICCKEFAASQRSPISLGCGHTVCKLCLTSLYNR-----QCPFDQTYIVTDIDNLPI 66
Query: 109 CNMVSLRLICKGNL 122
N + L+L+ KG L
Sbjct: 67 NNAL-LQLVAKGGL 79
>gi|213515404|ref|NP_001134456.1| RING finger protein 182 [Salmo salar]
gi|209733468|gb|ACI67603.1| RING finger protein 182 [Salmo salar]
Length = 173
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 26/161 (16%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL-QRAVIRLPTLPFQLP--FFITCPWC 109
LEC IC+ S+N P L C H+ C+ C++ L Q +V + + P I CP C
Sbjct: 5 LECGICYRSYNTGRRCPRELQCKHSFCERCLVTLSQSSVCEVESTKECSPQDKTIVCPLC 64
Query: 110 NM---VSLRLICKGNLKFPQKNYYLLWMV------ESMNGDRSKSN--------PHFR-G 151
VS ++ + L+ + L MV ESM D S PH
Sbjct: 65 RYPTPVSGKV--RAALRVDES--VLERMVVSGVLDESMTDDEEDSEGKEDDNETPHENSA 120
Query: 152 DHQPASSLNRNSAVRNQVSHAHNGRATCSHVSRQSEIRRDE 192
+ + +SS +R R +S G+ T +H R+++ DE
Sbjct: 121 EERDSSSGSRGGRFRRSLSRVW-GKFTGNHSQRRAQCMTDE 160
>gi|73955706|ref|XP_546612.2| PREDICTED: RING finger protein 222 [Canis lupus familiaris]
Length = 201
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 52 GLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNM 111
G ECP+C+E F +E L CGH C +C++ + + Q+ I CP C
Sbjct: 11 GSECPVCYEKFRDLEGASRTLSCGHVFCHDCLVKYLLST----RVDGQVQRTIVCPICRY 66
Query: 112 VSL 114
V+
Sbjct: 67 VTF 69
>gi|402895968|ref|XP_003911082.1| PREDICTED: RING finger protein 208 [Papio anubis]
Length = 261
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 8/59 (13%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
E LECP C ++NV + P VL C H++C+ C+ L + + FI+CP C
Sbjct: 139 EPLECPTCGHTYNVTQRRPRVLSCLHSVCEQCLQILYESCPKY--------KFISCPTC 189
>gi|58891532|gb|AAW83119.1| plenty of SH3s [Xenopus laevis]
Length = 826
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 52/123 (42%), Gaps = 26/123 (21%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMV 112
LECP+C E + VL C HT CK C+LG+ + L CP C
Sbjct: 10 LECPVCLEGLDASAK---VLPCQHTFCKRCLLGIVSSRKEL-----------RCPECRT- 54
Query: 113 SLRLICKGNLKFPQKNYYLLWMVESMNGDRSKSNPHFRGDHQPASSLNRNSAVRNQVSHA 172
L+ G + P + +V ++G R + P GD S+ N +A+R Q S
Sbjct: 55 ---LVECGVDELPSN----ILLVRLLDGIRQR--PRKAGDG--GSAGNSTNALRAQGSVT 103
Query: 173 HNG 175
NG
Sbjct: 104 TNG 106
>gi|149724297|ref|XP_001504872.1| PREDICTED: RING finger protein 222-like [Equus caballus]
Length = 209
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 52 GLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNM 111
G ECP+C+E F +E L CGH C +C++ + + Q+ I CP C
Sbjct: 11 GSECPVCYEKFRDLEGASRTLSCGHMFCHDCLVKYLLST----RVDGQVQRTIVCPICRY 66
Query: 112 VSL 114
V+
Sbjct: 67 VTF 69
>gi|395844204|ref|XP_003794852.1| PREDICTED: RING finger protein 208 [Otolemur garnettii]
Length = 266
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 8/59 (13%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
E LECP C ++NV + P VL C H++C+ C+ L + + FI+CP C
Sbjct: 144 EPLECPTCGHTYNVTQRRPRVLSCLHSVCEQCLQILYESCPKY--------KFISCPTC 194
>gi|395533442|ref|XP_003768769.1| PREDICTED: RING finger protein 222 [Sarcophilus harrisii]
Length = 211
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Query: 44 SLNNSREE-GLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPF 102
S S+E G ECP+C+E F +E L CGH C +C++ + + Q+
Sbjct: 2 SEGESKESVGSECPVCYEKFRDLEGASRTLSCGHVFCHDCLVKYLLSC----KVDGQIQR 57
Query: 103 FITCPWCNMVSL 114
I CP C V+
Sbjct: 58 TIICPICRYVTF 69
>gi|355567298|gb|EHH23639.1| hypothetical protein EGK_07146 [Macaca mulatta]
Length = 180
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 8/59 (13%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
E LECP C ++NV + P VL C H++C+ C+ L + + FI+CP C
Sbjct: 58 EPLECPTCGHTYNVTQRRPRVLSCLHSVCEQCLQILYESCPKY--------KFISCPTC 108
>gi|344250556|gb|EGW06660.1| RING finger protein 183 [Cricetulus griseus]
Length = 426
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 16 TAISGAIRLKNDALKPSQVSSELSDDDASLNNSREEGL--ECPICWESFNVVENLPYVLW 73
T IS + + + + +S E D + + + L ECP+CW FN + P VL
Sbjct: 206 TCISCSSGFGGEGCEATDISCEAPACDPRMAEPQGQELTAECPVCWNPFNNTFHTPKVLD 265
Query: 74 CGHTLCKNCVLGL 86
C H+ C C+ L
Sbjct: 266 CCHSFCVECLAHL 278
>gi|195374896|ref|XP_002046239.1| GJ12622 [Drosophila virilis]
gi|194153397|gb|EDW68581.1| GJ12622 [Drosophila virilis]
Length = 894
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 20/34 (58%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
L CPIC F + +P L CGHT+CK C+ L
Sbjct: 12 LNCPICCNEFEASQRVPISLGCGHTICKPCLTTL 45
>gi|126309099|ref|XP_001364025.1| PREDICTED: RING finger protein 222-like [Monodelphis domestica]
Length = 218
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 52 GLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNM 111
G ECP+C+E F +E L CGH C +C++ + + Q+ I CP C
Sbjct: 11 GSECPVCYEKFRDLEGASRTLSCGHVFCHDCLVKYLLSC----KVDGQIQKSIVCPICRY 66
Query: 112 VSL 114
V+
Sbjct: 67 VTF 69
>gi|341876709|gb|EGT32644.1| hypothetical protein CAEBREN_29370 [Caenorhabditis brenneri]
Length = 1515
Score = 42.0 bits (97), Expect = 0.33, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 35 SSELSDDDASLNNSREEGLE------CPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
S + DD+ ++ E+ + C +C+ +F+ +P +L CGH+ C+ C++GL R
Sbjct: 765 SGVMDDDEVTVIQPVEKDADADSKPVCMVCYNAFHSKTRVPKILPCGHSFCQECIVGLIR 824
Query: 89 A 89
+
Sbjct: 825 S 825
>gi|410979597|ref|XP_003996168.1| PREDICTED: RING finger protein 224 [Felis catus]
Length = 154
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 11/79 (13%)
Query: 35 SSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLP 94
SS +S++ + + R + C IC+ ++++ +LP L+CGHT C+ CV RL
Sbjct: 6 SSRVSEEGTATGSRRGD---CIICYSAYDLAGHLPRRLYCGHTFCQACVR-------RLD 55
Query: 95 TLPFQLPFFITCPWCNMVS 113
T+ + ++ CP C +
Sbjct: 56 TVAHEQ-RWVPCPQCRQST 73
>gi|402898706|ref|XP_003912361.1| PREDICTED: RING finger protein 222 [Papio anubis]
Length = 220
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 52 GLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNM 111
G ECP+C+E F +E L CGH C +C++ + + Q+ + CP C
Sbjct: 11 GSECPVCYEKFRDLEGASRTLSCGHVFCHDCLVKYLLST----RVDGQVQRTLVCPICRY 66
Query: 112 VSLRLICKGNLKFP 125
V+ + K + ++P
Sbjct: 67 VT--FLSKKSSRWP 78
>gi|76611199|ref|XP_602690.2| PREDICTED: RING finger protein 222 [Bos taurus]
gi|297486792|ref|XP_002695919.1| PREDICTED: RING finger protein 222 [Bos taurus]
gi|296476675|tpg|DAA18790.1| TPA: ring finger protein 222-like [Bos taurus]
Length = 211
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 52 GLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNM 111
G ECP+C+E F ++ L CGH C +C++ + + Q+ I CP C
Sbjct: 11 GSECPVCYEKFRELQGASRTLSCGHVFCHDCLVKYLLST----RVDGQVQRTIVCPICRY 66
Query: 112 VSLRLICKGNLKFPQK 127
V+ + + + ++P K
Sbjct: 67 VT--FLSRKSSRWPAK 80
>gi|340383447|ref|XP_003390229.1| PREDICTED: hypothetical protein LOC100641189, partial [Amphimedon
queenslandica]
Length = 600
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 12/76 (15%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
EE L C IC E F P +L C H+ C++C+ GL R V + T ++I+CP C
Sbjct: 14 EEQLTCLICLEHFTN----PKILPCHHSFCEHCLEGLSR-VKKNGT------YYISCPTC 62
Query: 110 NMVSLRLICKGNLKFP 125
S+ L G FP
Sbjct: 63 RR-SIELPKGGAGAFP 77
>gi|402595025|gb|EJW88951.1| hypothetical protein WUBG_00140 [Wuchereria bancrofti]
Length = 487
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 20/102 (19%)
Query: 52 GLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNM 111
L CP+C F V + P++L CGH+ C+NC+ + + F CP C
Sbjct: 340 ALHCPVC---FCVFASAPFILKCGHSFCQNCIKNIVEN-------SYSEQIF-ECPMC-- 386
Query: 112 VSLRLICKGNLKFPQKNYY---LLWMVESMNGDRSKSNPHFR 150
R + ++F +NY LL V + G+ ++ + +FR
Sbjct: 387 ---RQVISSEIRFT-RNYLVDALLQSVYEIAGNENEISTNFR 424
>gi|17538069|ref|NP_494240.1| Protein ZK1240.6 [Caenorhabditis elegans]
gi|351065653|emb|CCD61647.1| Protein ZK1240.6 [Caenorhabditis elegans]
Length = 128
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 14/91 (15%)
Query: 53 LECPICWESFNVVE--NLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
EC +C E+++ V+ ++P VL CGH++C++C + L TCP
Sbjct: 4 FECKVCNENYSDVDESHVPRVLTCGHSICQSCA---------AKQMSNSLILCKTCPEET 54
Query: 111 MVSLRLICKGNLKFPQKNYYLLWMVESMNGD 141
+ +R G+++ QKN+ L+ +E D
Sbjct: 55 ITKVR---DGDVRNLQKNFGLMQTIEMFQQD 82
>gi|431899048|gb|ELK07418.1| RING finger protein 208 [Pteropus alecto]
Length = 265
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 8/59 (13%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
E LECP C ++NV + P VL C H++C+ C+ L + + FI+CP C
Sbjct: 143 EPLECPTCGHTYNVTQRRPRVLSCLHSVCEQCLQILYESCPKY--------KFISCPTC 193
>gi|116089300|ref|NP_796034.2| RING finger protein 222 [Mus musculus]
gi|215273879|sp|Q8CEF8.2|RN222_MOUSE RecName: Full=RING finger protein 222
gi|148678508|gb|EDL10455.1| RIKEN cDNA 9930039A11 [Mus musculus]
gi|151555229|gb|AAI48492.1| Ring finger protein 222 [synthetic construct]
gi|157169952|gb|AAI53085.1| Ring finger protein 222 [synthetic construct]
Length = 211
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 52 GLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNM 111
G ECP+C+E F ++ L CGH C +C++ + + Q+ I CP C
Sbjct: 11 GSECPVCYEKFRDLDGASRTLSCGHVFCHDCLVKYLLST----RVDGQVQRTIVCPICRY 66
Query: 112 VSL 114
V+
Sbjct: 67 VTF 69
>gi|449276529|gb|EMC85001.1| E3 ubiquitin-protein ligase TRIM50 [Columba livia]
Length = 495
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Query: 47 NSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAV 90
N E+ L CPIC E F P +L CGH+ CK+CV+ L R +
Sbjct: 8 NELEDQLLCPICLEVFKE----PLMLQCGHSYCKSCVVSLSREL 47
>gi|341895875|gb|EGT51810.1| hypothetical protein CAEBREN_20500 [Caenorhabditis brenneri]
Length = 314
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 16/88 (18%)
Query: 52 GLECPICWESF-NVVENL-PYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
LEC +C + + N VE+L P +L CGHT+C+ C + + CP+
Sbjct: 3 SLECKVCLQEYSNQVEDLTPRMLTCGHTICEKCAEQILDGEE------------VACPFD 50
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVES 137
++ + G +K KNY LL ++E
Sbjct: 51 RKIT--NVDGGEIKSLSKNYTLLEILEE 76
>gi|311246928|ref|XP_003122395.1| PREDICTED: RING finger protein 208-like [Sus scrofa]
Length = 265
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 8/59 (13%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
E LECP C ++NV + P VL C H++C+ C+ L + + FI+CP C
Sbjct: 143 EPLECPTCGHTYNVTQRRPRVLSCLHSVCEQCLQILYESCPKY--------KFISCPTC 193
>gi|308457716|ref|XP_003091225.1| hypothetical protein CRE_05276 [Caenorhabditis remanei]
gi|308257913|gb|EFP01866.1| hypothetical protein CRE_05276 [Caenorhabditis remanei]
Length = 532
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 58/133 (43%), Gaps = 22/133 (16%)
Query: 12 SLPVTAISGAIRLKNDALKPSQVSSELSDDDASLNNSRE-----EGLECPICWESFNVVE 66
++P G I L N+ + ++ E+ + S++ G EC IC FN
Sbjct: 414 TIPSMMDLGIILLGNEMIMNNENEEEIKMSSVKVQKSKKNAGNSSGPECKICLLPFNETT 473
Query: 67 NLPYVL-WCGHTLCKNC--VLGLQRAVIRLPTLPFQLPFFITCPWCNMVSLRLICKGNLK 123
+P +L CGHT+C C +L +++ + I CP+C + + G+
Sbjct: 474 QIPRMLKECGHTVCGGCAELLLKKKSWVN-----------IVCPYCQKST---VVNGSAN 519
Query: 124 FPQKNYYLLWMVE 136
KNY +L M+E
Sbjct: 520 LLPKNYEVLEMME 532
>gi|65285121|ref|NP_944606.2| tripartite motif-containing protein 73 [Homo sapiens]
gi|56404880|sp|Q86UV7.1|TRI73_HUMAN RecName: Full=Tripartite motif-containing protein 73; AltName:
Full=Tripartite motif-containing protein 50B
gi|30315005|gb|AAP30735.1| tripartite motif protein TRIM50B [Homo sapiens]
gi|157170278|gb|AAI52801.1| Tripartite motif-containing 73 [synthetic construct]
gi|162317766|gb|AAI56767.1| Tripartite motif-containing 73 [synthetic construct]
gi|261860870|dbj|BAI46957.1| tripartite motif-containing protein 73 [synthetic construct]
Length = 250
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 23/94 (24%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
E+ L+CPIC E F E+L +L CGH+ CK C++ +L + L + CP C
Sbjct: 11 EDRLQCPICLEVFK--ESL--MLQCGHSYCKGCLV----------SLSYHLDTKVRCPMC 56
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMN--GD 141
V G+ P N L W++E++ GD
Sbjct: 57 WQVV-----DGSSSLP--NVSLAWVIEALRLPGD 83
>gi|118344162|ref|NP_001071903.1| zinc finger protein [Ciona intestinalis]
gi|92081480|dbj|BAE93287.1| zinc finger protein [Ciona intestinalis]
Length = 585
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 14/88 (15%)
Query: 53 LECPICWESFNVV-ENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNM 111
LEC +C E F++ E +P +L CGH+ C +C L LP Q + CP
Sbjct: 30 LECGVCGEQFSLSGEKVPRLLLCGHSFCHDC----------LTRLPVQAHTLV-CPMDRQ 78
Query: 112 VSLRLICKGNLKFPQKNYYLLWMVESMN 139
++ + G + +KN+ L+ ++E +
Sbjct: 79 IT--DVGSGGVWGLKKNFALIELMEKLQ 104
>gi|307185948|gb|EFN71750.1| Roquin [Camponotus floridanus]
Length = 991
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 21/38 (55%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC F+ P L CGHT+C+ C+ L R
Sbjct: 10 EFLSCPICCHDFDAAIRGPISLGCGHTICRACLANLHR 47
>gi|332848427|ref|XP_003315644.1| PREDICTED: RING finger protein 222 [Pan troglodytes]
gi|397494520|ref|XP_003818123.1| PREDICTED: RING finger protein 222 [Pan paniscus]
Length = 220
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 52 GLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNM 111
G ECP+C+E F +E L CGH C +C++ + + Q+ + CP C
Sbjct: 11 GSECPVCYEKFRDLEGASRTLSCGHVFCHDCLVKYLLST----RVDGQVQRTLVCPICRY 66
Query: 112 VSL 114
V+
Sbjct: 67 VTF 69
>gi|355752901|gb|EHH56947.1| hypothetical protein EGM_06466, partial [Macaca fascicularis]
Length = 166
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 8/60 (13%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
E LECP C ++NV + P VL C H++C+ C+ L + + FI+CP C
Sbjct: 47 EPLECPTCGHTYNVTQRRPRVLSCLHSVCEQCLQILYESCPKY--------KFISCPTCR 98
>gi|332251136|ref|XP_003274703.1| PREDICTED: RING finger protein 222 [Nomascus leucogenys]
Length = 220
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 52 GLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNM 111
G ECP+C+E F +E L CGH C +C++ + + Q+ + CP C
Sbjct: 11 GSECPVCYEKFRDLEGASRTLSCGHVFCHDCLVKYLLST----RVDGQVQRTLVCPICRY 66
Query: 112 VSLRLICKGNLKFP 125
V+ + K + ++P
Sbjct: 67 VT--FLSKKSSRWP 78
>gi|395842885|ref|XP_003794238.1| PREDICTED: E3 ubiquitin-protein ligase TRIM50 [Otolemur
garnettii]
Length = 487
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%), Gaps = 7/48 (14%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGL---QRAVIRLP 94
E+ L+CPIC E F P +L CGH+ CK+C++ L Q A +R P
Sbjct: 11 EDQLQCPICLEVFKE----PLMLQCGHSYCKDCLVSLSCHQDAKLRCP 54
>gi|308463883|ref|XP_003094212.1| hypothetical protein CRE_10601 [Caenorhabditis remanei]
gi|308248060|gb|EFO92012.1| hypothetical protein CRE_10601 [Caenorhabditis remanei]
Length = 233
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 15/85 (17%)
Query: 53 LECPICWESFNVVENLPYVL-WCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNM 111
LEC IC E ++ +P +L CGH++C CV LQ+ F + CP C
Sbjct: 163 LECNICLEDYSKTR-IPRILKECGHSVCDECVGQLQKINRNF--------FCVVCPTCR- 212
Query: 112 VSLRLICKGNLKFPQKNYYLLWMVE 136
R+ K P KNY L+ ++E
Sbjct: 213 ---RITYTTRSKLP-KNYALIGLME 233
>gi|308459488|ref|XP_003092063.1| hypothetical protein CRE_24267 [Caenorhabditis remanei]
gi|308254395|gb|EFO98347.1| hypothetical protein CRE_24267 [Caenorhabditis remanei]
Length = 792
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 16/90 (17%)
Query: 51 EGLECPICWESFNVVENLPYVL-WCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
E LEC IC +N + +P ++ CGHT+C++C R +IR TL C
Sbjct: 104 ESLECKICVRQYNETDRIPRIIPVCGHTICEDCA----RNIIRGNTL-----------KC 148
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMN 139
+ + +G +N+ +L +E N
Sbjct: 149 PIDRKDVNVEGGASSLPRNFAILETIEERN 178
>gi|426384094|ref|XP_004058611.1| PREDICTED: RING finger protein 222 [Gorilla gorilla gorilla]
Length = 220
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 52 GLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNM 111
G ECP+C+E F +E L CGH C +C++ + + Q+ + CP C
Sbjct: 11 GSECPVCYEKFRDLEGASRTLSCGHVFCHDCLVKYLLST----RVDGQVQRTLVCPICRY 66
Query: 112 VSL 114
V+
Sbjct: 67 VTF 69
>gi|21707222|gb|AAH33871.1| TRIM74 protein [Homo sapiens]
gi|123979822|gb|ABM81740.1| tripartite motif-containing 74 [synthetic construct]
gi|123994589|gb|ABM84896.1| tripartite motif-containing 74 [synthetic construct]
Length = 249
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 23/94 (24%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
E+ L+CPIC E F E+L +L CGH+ CK C L +L + L + CP C
Sbjct: 11 EDRLQCPICLEVFK--ESL--MLQCGHSYCKGC----------LVSLSYHLDTKVRCPMC 56
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMN--GD 141
V G+ P N L W++E++ GD
Sbjct: 57 WQVV-----DGSSSLP--NVSLAWVIEALRLPGD 83
>gi|149759081|ref|XP_001491564.1| PREDICTED: RING finger protein 208-like [Equus caballus]
Length = 265
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 8/59 (13%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
E LECP C ++NV + P VL C H++C+ C+ L + + FI+CP C
Sbjct: 143 EPLECPTCGHTYNVTQRRPRVLSCLHSVCEQCLQILYESCPKY--------KFISCPTC 193
>gi|32564312|ref|NP_494243.2| Protein ZK1240.1 [Caenorhabditis elegans]
gi|351065649|emb|CCD61643.1| Protein ZK1240.1 [Caenorhabditis elegans]
Length = 310
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 18/92 (19%)
Query: 53 LECPICWESFNVV--ENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
+EC IC F+ V + +P +L CGH++C+ C L + I+CP+C
Sbjct: 5 IECEICNLEFSSVNEDQVPRILKCGHSVCQCCATKLLKNSA------------ISCPFCR 52
Query: 111 MVSLRLICKGNLKFPQKNYYLLWMVESMNGDR 142
+ +K QKN+ LL ++E +R
Sbjct: 53 ETT----SVSAVKDLQKNFALLQIIEHTKTER 80
>gi|449507892|ref|XP_002192780.2| PREDICTED: roquin [Taeniopygia guttata]
Length = 1124
Score = 41.6 bits (96), Expect = 0.42, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
L CPIC ++F+ P L CGHT+CK C+ L R
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHR 47
>gi|336366153|gb|EGN94501.1| hypothetical protein SERLA73DRAFT_163062 [Serpula lacrymans var.
lacrymans S7.3]
Length = 603
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 15/55 (27%)
Query: 55 CPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
C +C E ++ +N P+ + CGH+ C+ C+ L R +TCP C
Sbjct: 10 CDVCLEGYSNGQNTPHAIVCGHSFCQGCLESLTR---------------LTCPLC 49
>gi|312067205|ref|XP_003136633.1| hypothetical protein LOAG_01045 [Loa loa]
Length = 606
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Query: 35 SSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLP 94
++ L ++ S+ N+ + C IC E F++ + LP +L C H C+ C+ L
Sbjct: 30 ATNLDKNEFSVKNAEYHSIRCEICSEPFHIRKRLPKLLPCEHNFCEQCIFSL------CC 83
Query: 95 TLPFQLPFFITCPWCN 110
+ L I CP C+
Sbjct: 84 HQQYYLLDSINCPTCH 99
>gi|449275847|gb|EMC84604.1| Roquin [Columba livia]
Length = 1124
Score = 41.6 bits (96), Expect = 0.42, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
L CPIC ++F+ P L CGHT+CK C+ L R
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHR 47
>gi|363736400|ref|XP_001234605.2| PREDICTED: LOW QUALITY PROTEIN: roquin [Gallus gallus]
Length = 1135
Score = 41.6 bits (96), Expect = 0.42, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
L CPIC ++F+ P L CGHT+CK C+ L R
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHR 47
>gi|355753747|gb|EHH57712.1| RING finger protein 222 [Macaca fascicularis]
Length = 194
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 52 GLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNM 111
G ECP+C+E F +E L CGH C +C++ + + Q+ + CP C
Sbjct: 11 GSECPVCYEKFRDLEGASRTLSCGHVFCHDCLVKYLLST----RVDGQVQRILVCPICRY 66
Query: 112 VSL 114
V+
Sbjct: 67 VTF 69
>gi|327270269|ref|XP_003219912.1| PREDICTED: roquin-like [Anolis carolinensis]
Length = 1129
Score = 41.6 bits (96), Expect = 0.42, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
L CPIC ++F+ P L CGHT+CK C+ L R
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHR 47
>gi|147903325|ref|NP_001084814.1| E3 ubiquitin-protein ligase SH3RF1 [Xenopus laevis]
gi|82185202|sp|Q6NRD3.1|SH3R1_XENLA RecName: Full=E3 ubiquitin-protein ligase SH3RF1; AltName:
Full=Plenty of SH3s; Short=Protein POSH; Short=xPOSH;
AltName: Full=SH3 domain-containing RING finger protein
1
gi|47124822|gb|AAH70823.1| Posh protein [Xenopus laevis]
Length = 826
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 52/123 (42%), Gaps = 26/123 (21%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMV 112
LECP+C E + VL C HT CK C+LG+ + L CP C
Sbjct: 10 LECPVCLERLDASAK---VLPCQHTFCKRCLLGIVSSRKEL-----------RCPECRT- 54
Query: 113 SLRLICKGNLKFPQKNYYLLWMVESMNGDRSKSNPHFRGDHQPASSLNRNSAVRNQVSHA 172
L+ G + P + +V ++G R + P GD S+ N +A+R Q S
Sbjct: 55 ---LVECGVDELPSN----ILLVRLLDGIRQR--PRKAGDG--GSAGNSTNALRAQGSVT 103
Query: 173 HNG 175
NG
Sbjct: 104 TNG 106
>gi|395505653|ref|XP_003757154.1| PREDICTED: RING finger and CCCH-type zinc finger
domain-containing protein 2 [Sarcophilus harrisii]
Length = 1194
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC+ F+ + P L C HT+CK C+ L R
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHR 47
>gi|355726003|gb|AES08732.1| tripartite motif-containing 13 [Mustela putorius furo]
Length = 250
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
EE L CPIC F+ P VL C H CK C+ G+ +R +L PF CP C
Sbjct: 5 EEDLTCPICCSLFDD----PRVLPCSHNFCKKCLEGILEGTVR-NSLWRSSPF--KCPTC 57
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMN 139
+ + Q NY L +VE N
Sbjct: 58 R----KETSATGVNSLQVNYSLKGIVEKYN 83
>gi|326924738|ref|XP_003208582.1| PREDICTED: roquin-like [Meleagris gallopavo]
Length = 1008
Score = 41.6 bits (96), Expect = 0.42, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
L CPIC ++F+ P L CGHT+CK C+ L R
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHR 47
>gi|341902410|gb|EGT58345.1| hypothetical protein CAEBREN_10572 [Caenorhabditis brenneri]
Length = 285
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 16/93 (17%)
Query: 53 LECPICWESF--NVVENLPYVLW-CGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
LEC +C++ F + P +L CGH+LC C L TL + I CP C
Sbjct: 180 LECNVCFKRFKGSSKRRTPRILTSCGHSLCHKC----------LETLSGSQGYVI-CPTC 228
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMNGDR 142
+ ++ G +K QKNY L ++E ++G +
Sbjct: 229 --MKKTVVPVGGVKMLQKNYIALGLLEEIDGKK 259
>gi|291405066|ref|XP_002719039.1| PREDICTED: ring finger protein 222-like [Oryctolagus cuniculus]
Length = 220
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 52 GLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNM 111
G ECP+C+E F ++ L CGH C +C++ + + Q+ I CP C
Sbjct: 11 GSECPVCYEKFRDLDGASRTLSCGHVFCHDCLVKYLLST----RVDGQVQRTIVCPICRY 66
Query: 112 VSL 114
V+
Sbjct: 67 VTF 69
>gi|195135659|ref|XP_002012250.1| GI16872 [Drosophila mojavensis]
gi|193918514|gb|EDW17381.1| GI16872 [Drosophila mojavensis]
Length = 845
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 20/34 (58%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
L CPIC F + +P L CGHT+CK C+ L
Sbjct: 12 LNCPICCNEFEASQRVPISLGCGHTICKPCLTTL 45
>gi|326926209|ref|XP_003209296.1| PREDICTED: tripartite motif-containing protein 59-like [Meleagris
gallopavo]
Length = 408
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 51/110 (46%), Gaps = 21/110 (19%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPT-----LPFQLPFFI 104
EE L C IC+ F P VL C HT C+NC+ G VI+L + P ++P +
Sbjct: 5 EEELTCSICYSLFED----PRVLPCSHTFCRNCLEG----VIQLSSNFSIWRPLRVP--L 54
Query: 105 TCPWCNMVSLRLICKGNLKFPQKNYYLLWMVESM----NGDRSKSNPHFR 150
CP C V + + G P N+ L ++E + D + + H+R
Sbjct: 55 KCPNCRTV-VEIPASGTESLPT-NFALKAIIEKYRQEDHSDVATCSEHYR 102
>gi|388582463|gb|EIM22768.1| hypothetical protein WALSEDRAFT_44505 [Wallemia sebi CBS 633.66]
Length = 1049
Score = 41.2 bits (95), Expect = 0.44, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 7/56 (12%)
Query: 32 SQVSSELSDDDASLNNSR---EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVL 84
S + ++ +D A NN+ EE ECPIC+E+ ++ P +L C H CK CVL
Sbjct: 769 SNYAQQVLNDLAQANNNDQVDEEENECPICFENMSI----PVLLPCMHKSCKQCVL 820
>gi|71994539|ref|NP_491164.2| Protein Y47G6A.14 [Caenorhabditis elegans]
gi|373220159|emb|CCD72559.1| Protein Y47G6A.14 [Caenorhabditis elegans]
Length = 468
Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Query: 55 CPICWESFNVVENLPYVLWCGHTLCKNCVLGLQ 87
CP+C E F+ + P+++ CGH+LC+ C++ L+
Sbjct: 10 CPVCQEEFDD-QKAPFIISCGHSLCETCIVHLK 41
>gi|73960580|ref|XP_861415.1| PREDICTED: roquin isoform 5 [Canis lupus familiaris]
Length = 1123
Score = 41.2 bits (95), Expect = 0.44, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
L CPIC ++F+ P L CGHT+CK C+ L R
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHR 47
>gi|395740927|ref|XP_002820235.2| PREDICTED: RING finger and CCCH-type zinc finger
domain-containing protein 2 [Pongo abelii]
Length = 1176
Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC+ F+ + P L C HT+CK C+ L R
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHR 47
>gi|348570124|ref|XP_003470847.1| PREDICTED: RING finger and CCCH-type zinc finger
domain-containing protein 2-like isoform 2 [Cavia
porcellus]
Length = 1197
Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC+ F+ + P L C HT+CK C+ L R
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHR 47
>gi|297715812|ref|XP_002834252.1| PREDICTED: RING finger protein 222-like [Pongo abelii]
Length = 220
Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 52 GLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNM 111
G ECP+C+E F +E L CGH C +C++ + + Q+ + CP C
Sbjct: 11 GSECPVCYEKFRDLEGASRTLSCGHVFCHDCLVKYLLST----RVDGQVQRTLVCPICRY 66
Query: 112 VSL 114
V+
Sbjct: 67 VTF 69
>gi|148676760|gb|EDL08707.1| mCG126320, isoform CRA_b [Mus musculus]
Length = 1137
Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC+ F+ + P L C HT+CK C+ L R
Sbjct: 22 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHR 59
>gi|444707241|gb|ELW48525.1| RING finger and CCCH-type zinc finger domain-containing protein 2
[Tupaia chinensis]
Length = 1282
Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC+ F+ + P L C HT+CK C+ L R
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHR 47
>gi|341882624|gb|EGT38559.1| hypothetical protein CAEBREN_02162 [Caenorhabditis brenneri]
Length = 698
Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 24/35 (68%)
Query: 55 CPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRA 89
C +C+ +F+ +P +L CGH+ C+ C++GL R+
Sbjct: 24 CMVCYNAFHSKTRVPKILPCGHSFCQECIVGLIRS 58
>gi|308461583|ref|XP_003093082.1| hypothetical protein CRE_10662 [Caenorhabditis remanei]
gi|308250808|gb|EFO94760.1| hypothetical protein CRE_10662 [Caenorhabditis remanei]
Length = 366
Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLP 94
EE L C +C++ F + P L CGH C+ C+ G +IR P
Sbjct: 298 EEALICTVCYDMF---KEEPRTLDCGHVFCEECIRGFNSPIIRCP 339
>gi|307188574|gb|EFN73302.1| GTP-binding protein ARD-1 [Camponotus floridanus]
Length = 546
Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 12/114 (10%)
Query: 53 LECPICWESFNVVE-NLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNM 111
LEC +C E F V +P +L CGHT+C C+L L+ + Q F+ CP+
Sbjct: 25 LECRVCEEVFTVDGVKVPRLLHCGHTVCHACLLRLRTCM--------QDQQFLLCPFDRQ 76
Query: 112 VSLRLICKGNLKFPQKNYYLLWMVESMNGDRSKSNPHF-RGDHQPASSLNRNSA 164
+ + + ++ +KN+ L+ ++E + S+ R HQ S + + A
Sbjct: 77 PT--AVHENSVYSLKKNFALIELLERLEQSNSEKTVVLERERHQSNQSCDEDEA 128
>gi|148676759|gb|EDL08706.1| mCG126320, isoform CRA_a [Mus musculus]
Length = 1185
Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC+ F+ + P L C HT+CK C+ L R
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHR 47
>gi|73960582|ref|XP_537186.2| PREDICTED: roquin isoform 1 [Canis lupus familiaris]
Length = 1132
Score = 41.2 bits (95), Expect = 0.45, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
L CPIC ++F+ P L CGHT+CK C+ L R
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHR 47
>gi|291408381|ref|XP_002720525.1| PREDICTED: ring finger and CCCH-type zinc finger domains 2
isoform 1 [Oryctolagus cuniculus]
Length = 1190
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC+ F+ + P L C HT+CK C+ L R
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHR 47
>gi|149636161|ref|XP_001515526.1| PREDICTED: roquin [Ornithorhynchus anatinus]
Length = 1137
Score = 41.2 bits (95), Expect = 0.45, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
L CPIC ++F+ P L CGHT+CK C+ L R
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHR 47
>gi|126306251|ref|XP_001365320.1| PREDICTED: roquin [Monodelphis domestica]
Length = 1133
Score = 41.2 bits (95), Expect = 0.45, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
L CPIC ++F+ P L CGHT+CK C+ L R
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHR 47
>gi|126294079|ref|XP_001365118.1| PREDICTED: RING finger and CCCH-type zinc finger
domain-containing protein 2 [Monodelphis domestica]
Length = 1194
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC+ F+ + P L C HT+CK C+ L R
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHR 47
>gi|155030209|ref|NP_001094061.1| RING finger and CCCH-type zinc finger domain-containing protein 2
[Mus musculus]
gi|73621224|sp|P0C090.1|RC3H2_MOUSE RecName: Full=RING finger and CCCH-type zinc finger
domain-containing protein 2; AltName:
Full=Membrane-associated nucleic acid-binding protein
Length = 1187
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC+ F+ + P L C HT+CK C+ L R
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHR 47
>gi|25395435|pir||B88072 protein ZK1240.2 [imported] - Caenorhabditis elegans
Length = 553
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 18/86 (20%)
Query: 53 LECPICWESFNVVE--NLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
++C IC E F+ + N+P +L CGHT C C L R I CP+C
Sbjct: 4 IDCEICDEEFSTLTDVNIPRILRCGHTTCHGCAEKLLRNST------------ILCPFCR 51
Query: 111 MVSLRLICKGNLKFPQKNYYLLWMVE 136
+ +K QKN+ LL VE
Sbjct: 52 EATN----VSAVKDLQKNFALLQAVE 73
>gi|340729837|ref|XP_003403201.1| PREDICTED: e3 ubiquitin-protein ligase TRIM23-like [Bombus
terrestris]
Length = 558
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 17/100 (17%)
Query: 49 REEGLECPICWESFNVVE-NLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCP 107
R LEC +C E F V +P +L CGHT+C +C+L L+ P + Q F+ CP
Sbjct: 21 RTNVLECRVCEEVFTVDGIKVPRLLHCGHTVCHSCLLRLR------PCMTDQQ--FLLCP 72
Query: 108 WCNM---VSLRLICKGNLKFPQKNYYLLWMVESMNGDRSK 144
+ +S +C NLK KN+ L+ ++E + S+
Sbjct: 73 FDRQPTSISQNNVC--NLK---KNFALIELLERLEQSNSE 107
>gi|410353137|gb|JAA43172.1| ring finger and CCCH-type domains 2 [Pan troglodytes]
Length = 1189
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC+ F+ + P L C HT+CK C+ L R
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHR 47
>gi|332832815|ref|XP_520240.3| PREDICTED: RING finger and CCCH-type zinc finger
domain-containing protein 2 isoform 6 [Pan troglodytes]
gi|397526548|ref|XP_003833184.1| PREDICTED: RING finger and CCCH-type zinc finger
domain-containing protein 2 [Pan paniscus]
gi|410215732|gb|JAA05085.1| ring finger and CCCH-type domains 2 [Pan troglodytes]
gi|410258374|gb|JAA17154.1| ring finger and CCCH-type domains 2 [Pan troglodytes]
gi|410301054|gb|JAA29127.1| ring finger and CCCH-type domains 2 [Pan troglodytes]
gi|410353135|gb|JAA43171.1| ring finger and CCCH-type domains 2 [Pan troglodytes]
Length = 1191
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC+ F+ + P L C HT+CK C+ L R
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHR 47
>gi|432097680|gb|ELK27792.1| Roquin [Myotis davidii]
Length = 1123
Score = 41.2 bits (95), Expect = 0.46, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
L CPIC ++F+ P L CGHT+CK C+ L R
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHR 47
>gi|226442736|ref|NP_001140156.1| RING finger protein 222 [Homo sapiens]
gi|182705199|sp|A6NCQ9.1|RN222_HUMAN RecName: Full=RING finger protein 222
Length = 220
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 52 GLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNM 111
G ECP+C+E F +E L CGH C +C++ + + Q+ + CP C
Sbjct: 11 GSECPVCYEKFRDLEGASRTLSCGHVFCHDCLVKYLLST----RVDGQVQRTLVCPICRY 66
Query: 112 VSL 114
V+
Sbjct: 67 VTF 69
>gi|395530831|ref|XP_003767490.1| PREDICTED: roquin isoform 2 [Sarcophilus harrisii]
Length = 1124
Score = 41.2 bits (95), Expect = 0.46, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
L CPIC ++F+ P L CGHT+CK C+ L R
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHR 47
>gi|390458336|ref|XP_002743333.2| PREDICTED: RING finger and CCCH-type zinc finger
domain-containing protein 2 [Callithrix jacchus]
Length = 1191
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC+ F+ + P L C HT+CK C+ L R
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHR 47
>gi|355753046|gb|EHH57092.1| Membrane-associated nucleic acid-binding protein [Macaca
fascicularis]
Length = 1191
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC+ F+ + P L C HT+CK C+ L R
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHR 47
>gi|355567454|gb|EHH23795.1| Membrane-associated nucleic acid-binding protein [Macaca mulatta]
Length = 1191
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC+ F+ + P L C HT+CK C+ L R
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHR 47
>gi|350402082|ref|XP_003486362.1| PREDICTED: E3 ubiquitin-protein ligase TRIM23-like [Bombus
impatiens]
Length = 558
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 17/100 (17%)
Query: 49 REEGLECPICWESFNVVE-NLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCP 107
R LEC +C E F V +P +L CGHT+C +C+L L+ P + Q F+ CP
Sbjct: 21 RTNVLECRVCEEVFTVDGIKVPRLLHCGHTVCHSCLLRLR------PCMTDQQ--FLLCP 72
Query: 108 WCNM---VSLRLICKGNLKFPQKNYYLLWMVESMNGDRSK 144
+ +S +C NLK KN+ L+ ++E + S+
Sbjct: 73 FDRQPTGISQNNVC--NLK---KNFALIELLERLEQSNSE 107
>gi|338724544|ref|XP_003364962.1| PREDICTED: roquin isoform 2 [Equus caballus]
Length = 1122
Score = 41.2 bits (95), Expect = 0.46, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
L CPIC ++F+ P L CGHT+CK C+ L R
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHR 47
>gi|308498143|ref|XP_003111258.1| hypothetical protein CRE_03959 [Caenorhabditis remanei]
gi|308240806|gb|EFO84758.1| hypothetical protein CRE_03959 [Caenorhabditis remanei]
Length = 301
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 14/82 (17%)
Query: 54 ECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVS 113
+C IC +FN + +L CGHT C C+ +Q+ + ++ CP C
Sbjct: 30 QCQICCTNFNETTRIAQLLHCGHTFCMECIGNIQK---------YGNSAYLECPTC---- 76
Query: 114 LRLICKGNLKFPQKNYYLLWMV 135
R K +L N+ + M+
Sbjct: 77 -RAETKCDLNEIATNFLAMEMI 97
>gi|109734772|gb|AAI17953.1| Ring finger and CCCH-type zinc finger domains 2 [Mus musculus]
Length = 1187
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC+ F+ + P L C HT+CK C+ L R
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHR 47
>gi|156105697|ref|NP_001094058.1| RING finger and CCCH-type zinc finger domain-containing protein 2
isoform 1 [Homo sapiens]
gi|73621223|sp|Q9HBD1.2|RC3H2_HUMAN RecName: Full=RING finger and CCCH-type zinc finger
domain-containing protein 2; AltName:
Full=Membrane-associated nucleic acid-binding protein;
AltName: Full=RING finger protein 164
gi|119607953|gb|EAW87547.1| membrane associated DNA binding protein, isoform CRA_a [Homo
sapiens]
gi|119607956|gb|EAW87550.1| membrane associated DNA binding protein, isoform CRA_a [Homo
sapiens]
Length = 1191
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC+ F+ + P L C HT+CK C+ L R
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHR 47
>gi|403299884|ref|XP_003940703.1| PREDICTED: RING finger and CCCH-type zinc finger
domain-containing protein 2 [Saimiri boliviensis
boliviensis]
Length = 1191
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC+ F+ + P L C HT+CK C+ L R
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHR 47
>gi|109730823|gb|AAI17952.1| Ring finger and CCCH-type zinc finger domains 2 [Mus musculus]
Length = 1187
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC+ F+ + P L C HT+CK C+ L R
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHR 47
>gi|431916005|gb|ELK16259.1| Roquin [Pteropus alecto]
Length = 1125
Score = 41.2 bits (95), Expect = 0.47, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
L CPIC ++F+ P L CGHT+CK C+ L R
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHR 47
>gi|426239915|ref|XP_004013862.1| PREDICTED: roquin isoform 2 [Ovis aries]
Length = 1124
Score = 41.2 bits (95), Expect = 0.47, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
L CPIC ++F+ P L CGHT+CK C+ L R
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHR 47
>gi|403374816|gb|EJY87368.1| Kelch motif family protein [Oxytricha trifallax]
Length = 1850
Score = 41.2 bits (95), Expect = 0.47, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCV 83
++C C E +++ N PYVL C HT+CK C+
Sbjct: 1 MQCSNCGEPYDLKNNTPYVLSCNHTVCKQCL 31
>gi|393907757|gb|EFO27439.2| hypothetical protein LOAG_01045 [Loa loa]
Length = 592
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Query: 35 SSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLP 94
++ L ++ S+ N+ + C IC E F++ + LP +L C H C+ C+ L
Sbjct: 30 ATNLDKNEFSVKNAEYHSIRCEICSEPFHIRKRLPKLLPCEHNFCEQCIFSL------CC 83
Query: 95 TLPFQLPFFITCPWCN 110
+ L I CP C+
Sbjct: 84 HQQYYLLDSINCPTCH 99
>gi|354484707|ref|XP_003504528.1| PREDICTED: RING finger and CCCH-type zinc finger
domain-containing protein 2-like [Cricetulus griseus]
Length = 1065
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC+ F+ + P L C HT+CK C+ L R
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHR 47
>gi|351702118|gb|EHB05037.1| Ring finger and CCCH-type zinc finger domain-containing protein 2
[Heterocephalus glaber]
Length = 1189
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC+ F+ + P L C HT+CK C+ L R
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHR 47
>gi|348570122|ref|XP_003470846.1| PREDICTED: RING finger and CCCH-type zinc finger
domain-containing protein 2-like isoform 1 [Cavia
porcellus]
Length = 1188
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC+ F+ + P L C HT+CK C+ L R
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHR 47
>gi|344271955|ref|XP_003407802.1| PREDICTED: RING finger and CCCH-type zinc finger
domain-containing protein 2 [Loxodonta africana]
Length = 1191
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC+ F+ + P L C HT+CK C+ L R
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHR 47
>gi|194210317|ref|XP_001916523.1| PREDICTED: roquin isoform 1 [Equus caballus]
Length = 1131
Score = 41.2 bits (95), Expect = 0.47, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
L CPIC ++F+ P L CGHT+CK C+ L R
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHR 47
>gi|157822509|ref|NP_001101309.1| RING finger and CCCH-type zinc finger domain-containing protein 2
[Rattus norvegicus]
gi|149047914|gb|EDM00530.1| membrane associated DNA binding protein (predicted) [Rattus
norvegicus]
Length = 1187
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC+ F+ + P L C HT+CK C+ L R
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHR 47
>gi|388452726|ref|NP_001252931.1| RING finger and CCCH-type zinc finger domain-containing protein 2
[Macaca mulatta]
gi|383414037|gb|AFH30232.1| RING finger and CCCH-type zinc finger domain-containing protein 2
isoform 1 [Macaca mulatta]
Length = 1191
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC+ F+ + P L C HT+CK C+ L R
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHR 47
>gi|426362969|ref|XP_004048621.1| PREDICTED: RING finger and CCCH-type zinc finger
domain-containing protein 2 [Gorilla gorilla gorilla]
Length = 1191
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC+ F+ + P L C HT+CK C+ L R
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHR 47
>gi|395824143|ref|XP_003785330.1| PREDICTED: RING finger and CCCH-type zinc finger
domain-containing protein 2 [Otolemur garnettii]
Length = 1188
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC+ F+ + P L C HT+CK C+ L R
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHR 47
>gi|380792785|gb|AFE68268.1| RING finger and CCCH-type zinc finger domain-containing protein 2
isoform 1, partial [Macaca mulatta]
Length = 1137
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC+ F+ + P L C HT+CK C+ L R
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHR 47
>gi|338720503|ref|XP_001502377.3| PREDICTED: LOW QUALITY PROTEIN: RING finger and CCCH-type zinc
finger domain-containing protein 2 [Equus caballus]
Length = 1195
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC+ F+ + P L C HT+CK C+ L R
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHR 47
>gi|291408383|ref|XP_002720526.1| PREDICTED: ring finger and CCCH-type zinc finger domains 2
isoform 2 [Oryctolagus cuniculus]
Length = 1188
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC+ F+ + P L C HT+CK C+ L R
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHR 47
>gi|147907152|ref|NP_001084548.1| probable E3 ubiquitin-protein ligase Roquin [Xenopus laevis]
gi|73621452|sp|Q6NUC6.1|RC3H1_XENLA RecName: Full=Probable E3 ubiquitin-protein ligase Roquin;
AltName: Full=RING finger and C3H zinc finger protein 1
gi|46250192|gb|AAH68669.1| MGC81061 protein [Xenopus laevis]
Length = 1114
Score = 41.2 bits (95), Expect = 0.47, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
L CPIC ++F+ P L CGHT+CK C+ L R
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHR 47
>gi|410979054|ref|XP_003995901.1| PREDICTED: RING finger and CCCH-type zinc finger
domain-containing protein 2 [Felis catus]
Length = 1191
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC+ F+ + P L C HT+CK C+ L R
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHR 47
>gi|403350962|gb|EJY74961.1| Kelch motif family protein [Oxytricha trifallax]
Length = 1849
Score = 41.2 bits (95), Expect = 0.47, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCV 83
++C C E +++ N PYVL C HT+CK C+
Sbjct: 1 MQCSNCGEPYDLKNNTPYVLSCNHTVCKQCL 31
>gi|301791992|ref|XP_002930964.1| PREDICTED: LOW QUALITY PROTEIN: RING finger and CCCH-type zinc
finger domain-containing protein 2-like [Ailuropoda
melanoleuca]
Length = 1199
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC+ F+ + P L C HT+CK C+ L R
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHR 47
>gi|301763166|ref|XP_002916999.1| PREDICTED: roquin-like [Ailuropoda melanoleuca]
gi|281353850|gb|EFB29434.1| hypothetical protein PANDA_005160 [Ailuropoda melanoleuca]
Length = 1132
Score = 41.2 bits (95), Expect = 0.47, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
L CPIC ++F+ P L CGHT+CK C+ L R
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHR 47
>gi|426239913|ref|XP_004013861.1| PREDICTED: roquin isoform 1 [Ovis aries]
Length = 1133
Score = 41.2 bits (95), Expect = 0.48, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
L CPIC ++F+ P L CGHT+CK C+ L R
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHR 47
>gi|387018230|gb|AFJ51233.1| Roquin-like [Crotalus adamanteus]
Length = 1126
Score = 41.2 bits (95), Expect = 0.48, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
L CPIC ++F+ P L CGHT+CK C+ L R
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHR 47
>gi|395530829|ref|XP_003767489.1| PREDICTED: roquin isoform 1 [Sarcophilus harrisii]
Length = 1134
Score = 41.2 bits (95), Expect = 0.48, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
L CPIC ++F+ P L CGHT+CK C+ L R
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHR 47
>gi|355715888|gb|AES05435.1| ring finger and CCCH-type zinc finger domains 1 [Mustela putorius
furo]
Length = 989
Score = 41.2 bits (95), Expect = 0.48, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
L CPIC ++F+ P L CGHT+CK C+ L R
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHR 47
>gi|281352240|gb|EFB27824.1| hypothetical protein PANDA_021624 [Ailuropoda melanoleuca]
Length = 1189
Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC+ F+ + P L C HT+CK C+ L R
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHR 47
>gi|149738500|ref|XP_001488852.1| PREDICTED: RING finger protein 183-like [Equus caballus]
Length = 192
Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 21/41 (51%)
Query: 46 NNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
RE ECP+CW FN + P VL C H+ C C+ L
Sbjct: 4 QQGREPEAECPVCWNPFNNTFHTPKVLDCCHSFCLECLAHL 44
>gi|332229954|ref|XP_003264151.1| PREDICTED: LOW QUALITY PROTEIN: RING finger and CCCH-type zinc
finger domain-containing protein 2 [Nomascus
leucogenys]
Length = 1203
Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC+ F+ + P L C HT+CK C+ L R
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHR 47
>gi|17533927|ref|NP_494271.1| Protein F42G2.5 [Caenorhabditis elegans]
gi|351062311|emb|CCD70285.1| Protein F42G2.5 [Caenorhabditis elegans]
Length = 374
Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 14/66 (21%)
Query: 46 NNSREEGLECPICWESFN-VVEN-LPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFF 103
N + +EC IC F+ VV+N +P +L CGH++C++C L + +
Sbjct: 125 NTDSKSNIECEICTLEFSSVVDNQIPRILQCGHSICQSCASKLAKNCV------------ 172
Query: 104 ITCPWC 109
I CP+C
Sbjct: 173 ILCPFC 178
>gi|449478321|ref|XP_002189968.2| PREDICTED: RING finger and CCCH-type zinc finger
domain-containing protein 2 [Taeniopygia guttata]
Length = 1191
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC+ F+ + P L C HT+CK C+ L R
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHR 47
>gi|260816137|ref|XP_002602828.1| hypothetical protein BRAFLDRAFT_99155 [Branchiostoma floridae]
gi|229288141|gb|EEN58840.1| hypothetical protein BRAFLDRAFT_99155 [Branchiostoma floridae]
Length = 348
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPF 102
E+ + C IC + F P +L CGHT C+ C++ R +R PT ++P
Sbjct: 12 EDSMSCGICLQPFK----RPKILPCGHTFCEECLVEAARGGLRCPTCRVRVPL 60
>gi|126327498|ref|XP_001368597.1| PREDICTED: e3 ubiquitin-protein ligase TRIM13 [Monodelphis
domestica]
Length = 408
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
EE L CPIC F+ P VL C H CK C+ G+ +R L Q PF CP C
Sbjct: 5 EEDLTCPICCSLFDD----PRVLPCSHNFCKKCLEGILEGNVR-NMLWRQSPF--KCPTC 57
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMN 139
+ + Q NY L +VE N
Sbjct: 58 R----KETAAAGVNSLQVNYSLKGIVEKYN 83
>gi|441634632|ref|XP_004089857.1| PREDICTED: roquin isoform 2 [Nomascus leucogenys]
Length = 1124
Score = 41.2 bits (95), Expect = 0.49, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
L CPIC ++F+ P L CGHT+CK C+ L R
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHR 47
>gi|359320518|ref|XP_003639362.1| PREDICTED: LOW QUALITY PROTEIN: RING finger and CCCH-type zinc
finger domain-containing protein 2 [Canis lupus
familiaris]
Length = 1195
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC+ F+ + P L C HT+CK C+ L R
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHR 47
>gi|350579628|ref|XP_001927873.4| PREDICTED: LOW QUALITY PROTEIN: RING finger and CCCH-type zinc
finger domain-containing protein 2 [Sus scrofa]
Length = 1196
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC+ F+ + P L C HT+CK C+ L R
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHR 47
>gi|47523460|ref|NP_999351.1| E3 ubiquitin-protein ligase TRIM50 [Sus scrofa]
gi|56404687|sp|Q865W2.1|TRI50_PIG RecName: Full=E3 ubiquitin-protein ligase TRIM50; AltName:
Full=Tripartite motif-containing protein 50
gi|29465654|gb|AAL91074.1| tripartite motif protein 50 [Sus scrofa]
Length = 486
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 4/39 (10%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E+ L+CP+C E F P +L CGH+ CK C+L L R
Sbjct: 11 EDRLQCPVCLEVFKE----PLMLQCGHSYCKGCLLSLSR 45
>gi|441634635|ref|XP_004089858.1| PREDICTED: roquin isoform 3 [Nomascus leucogenys]
Length = 1125
Score = 41.2 bits (95), Expect = 0.49, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
L CPIC ++F+ P L CGHT+CK C+ L R
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHR 47
>gi|440890310|gb|ELR44806.1| RING finger and CCCH-type zinc finger domain-containing protein
2, partial [Bos grunniens mutus]
Length = 1189
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC+ F+ + P L C HT+CK C+ L R
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHR 47
>gi|431898804|gb|ELK07174.1| Ring finger and CCCH-type zinc finger domain-containing protein 2
[Pteropus alecto]
Length = 1188
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC+ F+ + P L C HT+CK C+ L R
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHR 47
>gi|426223076|ref|XP_004005705.1| PREDICTED: LOW QUALITY PROTEIN: RING finger and CCCH-type zinc
finger domain-containing protein 2 [Ovis aries]
Length = 1195
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC+ F+ + P L C HT+CK C+ L R
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHR 47
>gi|9837125|gb|AAG00432.1|AF255303_1 membrane-associated nucleic acid binding protein [Homo sapiens]
Length = 1048
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC+ F+ + P L C HT+CK C+ L R
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHR 47
>gi|308510674|ref|XP_003117520.1| hypothetical protein CRE_01849 [Caenorhabditis remanei]
gi|308242434|gb|EFO86386.1| hypothetical protein CRE_01849 [Caenorhabditis remanei]
Length = 366
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 14/102 (13%)
Query: 34 VSSELSDDDASLNNSREEGLECPICWESFNVVENL-PYVLWCGHTLCKNCVLGLQRAVIR 92
+SS+L +D A C IC ++ +L P VL CGHT+C +C++ L
Sbjct: 278 MSSQLREDGADKKGEVPAWKTCEICLREYSEQRDLIPRVLSCGHTVCHSCLVNL------ 331
Query: 93 LPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWM 134
+ P I CP+ +L I ++ KNY +L M
Sbjct: 332 -----YTDPEGIKCPFDR--TLTEIKNNDVSTLPKNYSILQM 366
>gi|118099494|ref|XP_415394.2| PREDICTED: RING finger and CCCH-type zinc finger
domain-containing protein 2 [Gallus gallus]
Length = 1195
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC+ F+ + P L C HT+CK C+ L R
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHR 47
>gi|359070414|ref|XP_002691620.2| PREDICTED: RING finger and CCCH-type zinc finger
domain-containing protein 2 [Bos taurus]
Length = 1080
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC+ F+ + P L C HT+CK C+ L R
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHR 47
>gi|296482188|tpg|DAA24303.1| TPA: Tandem Array expression Modifier family member (tam-1)-like
[Bos taurus]
Length = 1191
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC+ F+ + P L C HT+CK C+ L R
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHR 47
>gi|74137887|dbj|BAE24092.1| unnamed protein product [Mus musculus]
Length = 1130
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
L CPIC ++F+ P L CGHT+C+ C+ L R
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCEMCLNKLHR 47
>gi|358414580|ref|XP_001251111.2| PREDICTED: LOW QUALITY PROTEIN: RING finger and CCCH-type zinc
finger domain-containing protein 2 [Bos taurus]
Length = 1195
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC+ F+ + P L C HT+CK C+ L R
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHR 47
>gi|345329752|ref|XP_001512234.2| PREDICTED: RING finger and CCCH-type zinc finger
domain-containing protein 2 [Ornithorhynchus anatinus]
Length = 1084
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC+ F+ + P L C HT+CK C+ L R
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHR 47
>gi|156105699|ref|NP_061323.2| RING finger and CCCH-type zinc finger domain-containing protein 2
isoform 2 [Homo sapiens]
gi|119607954|gb|EAW87548.1| membrane associated DNA binding protein, isoform CRA_b [Homo
sapiens]
Length = 1064
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC+ F+ + P L C HT+CK C+ L R
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHR 47
>gi|441634638|ref|XP_004089859.1| PREDICTED: roquin isoform 4 [Nomascus leucogenys]
Length = 1134
Score = 41.2 bits (95), Expect = 0.51, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
L CPIC ++F+ P L CGHT+CK C+ L R
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHR 47
>gi|432095441|gb|ELK26640.1| RING finger and CCCH-type zinc finger domain-containing protein 2
[Myotis davidii]
Length = 1418
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC+ F+ + P L C HT+CK C+ L R
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHR 47
>gi|68074577|ref|XP_679204.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56499895|emb|CAH94436.1| conserved hypothetical protein [Plasmodium berghei]
Length = 1189
Score = 41.2 bits (95), Expect = 0.51, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 14 PVTAISGAIRLKNDALKPSQVSSELSDD-DASLNNSREEGLECPICWESFNVVENLPYVL 72
P+ + KN S +S+ L+ + D S + CPI + + +N+PY+L
Sbjct: 1089 PIEKLRKEDNKKNKKQNSSLISNSLAIEVDLSGSFFFHSSFTCPISRDK-SSKDNMPYLL 1147
Query: 73 WCGHTLCKNCV 83
CGH +CKNCV
Sbjct: 1148 TCGHVICKNCV 1158
>gi|355559055|gb|EHH15835.1| hypothetical protein EGK_01986 [Macaca mulatta]
gi|355746203|gb|EHH50828.1| hypothetical protein EGM_01713 [Macaca fascicularis]
gi|383416017|gb|AFH31222.1| roquin [Macaca mulatta]
Length = 1133
Score = 41.2 bits (95), Expect = 0.51, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
L CPIC ++F+ P L CGHT+CK C+ L R
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHR 47
>gi|341895878|gb|EGT51813.1| hypothetical protein CAEBREN_13789 [Caenorhabditis brenneri]
Length = 475
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 48 SREEGLECPICWESF--NVVENLPYVL-WCGHTLCKNCVLGLQR 88
+ +E LEC +C F N+ N+P +L CGHT+C C L LQ+
Sbjct: 116 ANDESLECKVCVAPFSDNIQGNVPRILPACGHTICHTCALTLQK 159
>gi|341882041|gb|EGT37976.1| hypothetical protein CAEBREN_18583 [Caenorhabditis brenneri]
Length = 675
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
Query: 55 CPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVS 113
C +C++ ++ N VL CGHT C CV+ + + ++P I CP C +S
Sbjct: 58 CRVCYDEYHTSRNQARVLGCGHTFCTRCVISC--STPKGQSVP---QTGIKCPECRKIS 111
>gi|332219622|ref|XP_003258953.1| PREDICTED: roquin isoform 1 [Nomascus leucogenys]
Length = 1133
Score = 41.2 bits (95), Expect = 0.51, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
L CPIC ++F+ P L CGHT+CK C+ L R
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHR 47
>gi|301603692|ref|XP_002931481.1| PREDICTED: roquin-like [Xenopus (Silurana) tropicalis]
Length = 1123
Score = 41.2 bits (95), Expect = 0.51, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
L CPIC ++F+ P L CGHT+CK C+ L R
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHR 47
>gi|297662686|ref|XP_002809831.1| PREDICTED: roquin [Pongo abelii]
Length = 1112
Score = 41.2 bits (95), Expect = 0.51, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
L CPIC ++F+ P L CGHT+CK C+ L R
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHR 47
>gi|119607955|gb|EAW87549.1| membrane associated DNA binding protein, isoform CRA_c [Homo
sapiens]
Length = 1007
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC+ F+ + P L C HT+CK C+ L R
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHR 47
>gi|109019566|ref|XP_001102837.1| PREDICTED: roquin isoform 2 [Macaca mulatta]
Length = 1125
Score = 41.2 bits (95), Expect = 0.51, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
L CPIC ++F+ P L CGHT+CK C+ L R
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHR 47
>gi|402858273|ref|XP_003893638.1| PREDICTED: roquin isoform 1 [Papio anubis]
Length = 1125
Score = 41.2 bits (95), Expect = 0.51, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
L CPIC ++F+ P L CGHT+CK C+ L R
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHR 47
>gi|417405904|gb|JAA49642.1| Putative e3 ubiquitin ligase [Desmodus rotundus]
Length = 1114
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC+ F+ + P L C HT+CK C+ L R
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHR 47
>gi|326930512|ref|XP_003211390.1| PREDICTED: RING finger and CCCH-type zinc finger
domain-containing protein 2-like [Meleagris gallopavo]
Length = 1195
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC+ F+ + P L C HT+CK C+ L R
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHR 47
>gi|417405922|gb|JAA49651.1| Putative e3 ubiquitin ligase [Desmodus rotundus]
Length = 1119
Score = 41.2 bits (95), Expect = 0.53, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
L CPIC ++F+ P L CGHT+CK C+ L R
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHR 47
>gi|402858275|ref|XP_003893639.1| PREDICTED: roquin isoform 2 [Papio anubis]
Length = 1134
Score = 41.2 bits (95), Expect = 0.53, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
L CPIC ++F+ P L CGHT+CK C+ L R
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHR 47
>gi|395506601|ref|XP_003757620.1| PREDICTED: RING finger protein 224 [Sarcophilus harrisii]
Length = 165
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 8/60 (13%)
Query: 54 ECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVS 113
+C IC+ S+++ LP L+CGHT C+ CV L P +I CP C +
Sbjct: 28 DCIICYSSYDLAGRLPRRLYCGHTFCQACVRRLD--------TPAHEQRWIPCPQCRQST 79
>gi|348577835|ref|XP_003474689.1| PREDICTED: LOW QUALITY PROTEIN: roquin-like [Cavia porcellus]
Length = 1134
Score = 41.2 bits (95), Expect = 0.53, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
L CPIC ++F+ P L CGHT+CK C+ L R
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHR 47
>gi|344248497|gb|EGW04601.1| Ring finger and CCCH-type zinc finger domain-containing protein 2
[Cricetulus griseus]
Length = 835
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC+ F+ + P L C HT+CK C+ L R
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHR 47
>gi|219521558|gb|AAI44409.1| RC3H1 protein [Homo sapiens]
Length = 1124
Score = 41.2 bits (95), Expect = 0.53, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
L CPIC ++F+ P L CGHT+CK C+ L R
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHR 47
>gi|193783831|dbj|BAG53813.1| unnamed protein product [Homo sapiens]
Length = 1125
Score = 41.2 bits (95), Expect = 0.53, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
L CPIC ++F+ P L CGHT+CK C+ L R
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHR 47
>gi|397508574|ref|XP_003824727.1| PREDICTED: roquin isoform 1 [Pan paniscus]
Length = 1125
Score = 41.2 bits (95), Expect = 0.53, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
L CPIC ++F+ P L CGHT+CK C+ L R
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHR 47
>gi|293341411|ref|XP_002724928.1| PREDICTED: roquin-like [Rattus norvegicus]
Length = 1130
Score = 41.2 bits (95), Expect = 0.53, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
L CPIC ++F+ P L CGHT+CK C+ L R
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHR 47
>gi|109019564|ref|XP_001102746.1| PREDICTED: roquin isoform 1 [Macaca mulatta]
Length = 1134
Score = 41.2 bits (95), Expect = 0.53, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
L CPIC ++F+ P L CGHT+CK C+ L R
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHR 47
>gi|354470966|ref|XP_003497715.1| PREDICTED: roquin [Cricetulus griseus]
Length = 1128
Score = 41.2 bits (95), Expect = 0.54, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
L CPIC ++F+ P L CGHT+CK C+ L R
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHR 47
>gi|351696817|gb|EHA99735.1| Roquin [Heterocephalus glaber]
Length = 1133
Score = 41.2 bits (95), Expect = 0.54, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
L CPIC ++F+ P L CGHT+CK C+ L R
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHR 47
>gi|47228275|emb|CAG07670.1| unnamed protein product [Tetraodon nigroviridis]
Length = 983
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC ++F P L CGHT+CK C+ L R
Sbjct: 10 EFLLCPICTQTFEETVRRPISLGCGHTVCKMCLNKLHR 47
>gi|422933583|ref|YP_007003707.1| protein ORF41 [Cyprinid herpesvirus 1]
gi|386685989|gb|AFJ20342.1| protein ORF41 [Cyprinid herpesvirus 1]
Length = 438
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 4/38 (10%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
EGLECP+C +F N P CGHT C+ C + ++R
Sbjct: 2 EGLECPVCLTTF----NRPVTTPCGHTFCRRCWIQVER 35
>gi|308463859|ref|XP_003094200.1| hypothetical protein CRE_10622 [Caenorhabditis remanei]
gi|308248048|gb|EFO92000.1| hypothetical protein CRE_10622 [Caenorhabditis remanei]
Length = 239
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 14/92 (15%)
Query: 53 LECPICWESFNVVENLPYVL-WCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNM 111
+EC IC ++ ++ +P +L CGHT+C +C L R ++ CP+C M
Sbjct: 147 IECRICVTEYSDLK-VPRILKECGHTICHDCADVLLNRFNR---------HYMMCPFCQM 196
Query: 112 VSLRLICKGNLKFPQKNYYLLWMVESMNGDRS 143
++ + +GN +N+ ++ +++ N R
Sbjct: 197 IT---VVRGNANLLPRNFSMIEIIDERNKKRG 225
>gi|26390229|dbj|BAC25864.1| unnamed protein product [Mus musculus]
Length = 211
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 52 GLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNM 111
G ECP+C+E F ++ L CGH C +C++ + + Q+ I CP C
Sbjct: 11 GSECPMCYEKFRDLDGASRTLSCGHVFCHDCLVKYLLST----RVDGQVQRTIVCPICRY 66
Query: 112 VSL 114
V+
Sbjct: 67 VTF 69
>gi|403366470|gb|EJY83038.1| Kelch motif family protein [Oxytricha trifallax]
Length = 1353
Score = 41.2 bits (95), Expect = 0.55, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 65/133 (48%), Gaps = 26/133 (19%)
Query: 53 LECPICWESFNVVENLPYVL-WCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNM 111
++C +C +S++ ++LP +L CGHTLC+ C+ R +++ ++ CP C+
Sbjct: 3 IQCSLCCQSYDKQQHLPRILIQCGHTLCELCL----RNILKTDSV-------FDCPECDT 51
Query: 112 V---------SLRLICKGNLKFPQKNYYLLWMVE----SMNGDRSKSNPHFRGDHQPASS 158
V S I + ++FP KN L+ + E ++ ++SKS+ Q +SS
Sbjct: 52 VIIVEQDKLESQEQIEQAIMRFP-KNIALINIQEYGQLNLKNNQSKSDQIKTQQTQQSSS 110
Query: 159 LNRNSAVRNQVSH 171
+N++ H
Sbjct: 111 GLQNTSSNGSAIH 123
>gi|26330171|dbj|BAC25078.1| unnamed protein product [Mus musculus]
Length = 128
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 8/60 (13%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
E LECP C ++NV + P VL C H++C+ C+ L + + FI+CP C+
Sbjct: 6 EPLECPTCGHTYNVTQRRPRVLSCLHSVCEQCLQILYESCPKYK--------FISCPTCH 57
>gi|357622653|gb|EHJ74079.1| hypothetical protein KGM_18646 [Danaus plexippus]
Length = 760
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 20/36 (55%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
L CP+C F + P L CGHTLC +C+ L R
Sbjct: 12 LNCPVCCRDFGLPPRSPISLGCGHTLCGHCIKHLHR 47
>gi|341874954|gb|EGT30889.1| hypothetical protein CAEBREN_05351 [Caenorhabditis brenneri]
Length = 120
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 51/110 (46%), Gaps = 20/110 (18%)
Query: 35 SSELSDDDASLNNSRE-----EGLECPICWESFNVVENLPYVLW-CGHTLCKNCVLGLQR 88
S + SDD+ N E E LEC +C+ ++ +P VL CGH+LCK C Q+
Sbjct: 21 SFDESDDEQLPNFPTEIVISSEDLECNVCFLPYSD-RRVPLVLTKCGHSLCKKCCKASQQ 79
Query: 89 AVIRLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVESM 138
F FI CP+C R G+ + KNY ++ +V+ +
Sbjct: 80 Q--------FLFSRFINCPFC-----RTRTPGSFEMLPKNYTVMRIVQKI 116
>gi|55468848|emb|CAE51310.1| crgA protein [Blakeslea trispora]
Length = 611
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 34/71 (47%), Gaps = 13/71 (18%)
Query: 23 RLKNDALKPSQ---------VSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLW 73
RL AL+PS VS+E S +L + + ECPIC FN P
Sbjct: 81 RLHTIALQPSVTIQALQAIVVSAEASRTLDTLRLTLDSSTECPICCSRFNNPTTTP---- 136
Query: 74 CGHTLCKNCVL 84
CGHT C+NC++
Sbjct: 137 CGHTFCRNCLI 147
>gi|380017229|ref|XP_003692562.1| PREDICTED: E3 ubiquitin-protein ligase TRIM23-like [Apis florea]
Length = 559
Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 11/97 (11%)
Query: 49 REEGLECPICWESFNVVE-NLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCP 107
R LEC +C E F + +P +L CGHT+C +C+L L+ P + Q F+ CP
Sbjct: 21 RTNVLECRVCEEVFTIDGIKVPRLLHCGHTVCHSCLLRLR------PCMTDQQ--FLLCP 72
Query: 108 WCNMVSLRLICKGNLKFPQKNYYLLWMVESMNGDRSK 144
+ + I + N+ +KN+ L+ ++E + S+
Sbjct: 73 FDRQPT--GISQNNIYNLKKNFALIELLERLEQSNSE 107
>gi|351706098|gb|EHB09017.1| E3 ubiquitin-protein ligase RFWD2 [Heterocephalus glaber]
Length = 734
Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 5/90 (5%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMV 112
L CPIC F+++E Y+ CGH+ C C+ R P + + I + N +
Sbjct: 120 LHCPIC---FDMIEE-AYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVD-NIDHLYPNFL 174
Query: 113 SLRLICKGNLKFPQKNYYLLWMVESMNGDR 142
LI K +F +K + L V S NG R
Sbjct: 175 VNELILKQKQRFEEKRFKLDHSVSSTNGHR 204
>gi|341879758|gb|EGT35693.1| hypothetical protein CAEBREN_10102 [Caenorhabditis brenneri]
Length = 276
Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 6/69 (8%)
Query: 32 SQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVI 91
++V +L+ A++ E CP CW+ + P V CGHT C+ C + R V+
Sbjct: 199 AEVDGQLARQTAAIRKVTGEVGRCPACWDHMDA----PQVTDCGHTFCQECPVC--RGVV 252
Query: 92 RLPTLPFQL 100
R P F L
Sbjct: 253 RRPVRNFGL 261
>gi|321471265|gb|EFX82238.1| hypothetical protein DAPPUDRAFT_316914 [Daphnia pulex]
Length = 399
Score = 40.8 bits (94), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 16/99 (16%)
Query: 47 NSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITC 106
N E+ + C +C+ F+ + P L C HT+C +C+ +++ ITC
Sbjct: 5 NDVEDFVTCGVCFYQFDDFDRKPKFLPCAHTVCLSCLKEMRKG------------HLITC 52
Query: 107 PWCNMVSLRLICKGNLKFPQKNYYLLWMVESMNGDRSKS 145
P+C + L L G P N Y L M++ SK+
Sbjct: 53 PFCREMILSLDVTG---LPN-NPYALHMLKFKEKKESKN 87
>gi|363540104|ref|YP_004894646.1| mg595 gene product [Megavirus chiliensis]
gi|350611269|gb|AEQ32713.1| putative ring finger protein [Megavirus chiliensis]
Length = 670
Score = 40.8 bits (94), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 16/62 (25%)
Query: 49 REEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPW 108
E ++CPIC+ S N+V++ L CGHT+C +C+L + LP CP
Sbjct: 486 NETLVDCPICYGSENLVQS---KLICGHTICLDCILNI-------------LPNSKKCPV 529
Query: 109 CN 110
CN
Sbjct: 530 CN 531
>gi|308456629|ref|XP_003090741.1| hypothetical protein CRE_03516 [Caenorhabditis remanei]
gi|308260767|gb|EFP04720.1| hypothetical protein CRE_03516 [Caenorhabditis remanei]
Length = 949
Score = 40.8 bits (94), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 18/91 (19%)
Query: 51 EGLECPICWESFNVVENLPYVL-WCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
E LEC IC +N + +P V+ CGHTLC++C R +I TL CP
Sbjct: 257 ESLECKICVRQYNETDRIPRVIPVCGHTLCEDCA----RNIISGNTL--------KCP-- 302
Query: 110 NMVSLRLI-CKGNLKFPQKNYYLLWMVESMN 139
V R + +G +N+ +L +E N
Sbjct: 303 --VDRRDVNVEGGASSLPRNFAILETIEERN 331
>gi|298710118|emb|CBJ31831.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1677
Score = 40.8 bits (94), Expect = 0.59, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 6/52 (11%)
Query: 34 VSSELSDDDASLNNSRE--EGLECPICWESFNVVENLPYVLWCGHTLCKNCV 83
VS E D ++ N RE +GL C IC E + NLP CGH+ C+ C+
Sbjct: 2 VSLEKESDRQAMENVREFRKGLLCSICNEFLSDTYNLP----CGHSFCRECI 49
>gi|268531730|ref|XP_002630992.1| Hypothetical protein CBG02734 [Caenorhabditis briggsae]
Length = 247
Score = 40.8 bits (94), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 69/162 (42%), Gaps = 40/162 (24%)
Query: 3 TPIGNYFPS--------SLPVTAISGAIRLKNDALKPSQVSSELSDDDASLNNSREEGLE 54
+P GNYF + ++PV + R K+ L S + +E
Sbjct: 73 SPYGNYFVTVDTGTEIKTIPVEFKTDYERCKSPELPLSAI------------------IE 114
Query: 55 CPICWESFNVVENLPYVL-WCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVS 113
C IC+ SF+ +P V+ CGHTLC+ C L +P + F I CP + S
Sbjct: 115 CQICYASFDNKARVPRVIKECGHTLCQRCCQHLM--------IPNKNQFII-CPV-DRTS 164
Query: 114 LRLICKGNLKFPQKNYYLLWMVESMNGDRSKS-NPHFRGDHQ 154
+ GN+ KN+ L+ ++ ++KS P+F H+
Sbjct: 165 TAVY--GNINSLPKNFALIQLINESQVYKTKSTGPYFCSTHK 204
>gi|38524612|ref|NP_942150.1| tripartite motif-containing protein 74 [Homo sapiens]
gi|56404879|sp|Q86UV6.1|TRI74_HUMAN RecName: Full=Tripartite motif-containing protein 74; AltName:
Full=Tripartite motif-containing protein 50C
gi|30315007|gb|AAP30736.1| tripartite motif protein TRIM50C [Homo sapiens]
Length = 250
Score = 40.8 bits (94), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 23/94 (24%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
E+ L+CPIC E F E+L +L CGH+ CK C L +L + L + CP C
Sbjct: 11 EDWLQCPICLEVFK--ESL--MLQCGHSYCKGC----------LVSLSYHLDTKVRCPMC 56
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMN--GD 141
V G+ P N L W++E++ GD
Sbjct: 57 WQVV-----DGSSSLP--NVSLAWVIEALRLPGD 83
>gi|410924271|ref|XP_003975605.1| PREDICTED: LOW QUALITY PROTEIN: roquin-like [Takifugu rubripes]
Length = 1123
Score = 40.8 bits (94), Expect = 0.63, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC ++F P L CGHT+CK C+ L R
Sbjct: 10 EFLLCPICTQTFEETVRRPISLGCGHTVCKMCLNKLHR 47
>gi|426225987|ref|XP_004007138.1| PREDICTED: LOW QUALITY PROTEIN: RING finger protein 224 [Ovis
aries]
Length = 197
Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 56/126 (44%), Gaps = 14/126 (11%)
Query: 39 SDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPF 98
S++ A+ R + C +C+ ++++ +LP L+CGHT+C+ CV L P
Sbjct: 51 SEEAAATGPQRGD---CVVCYSAYDLAGHLPRRLYCGHTVCQACVRRL--------AAPA 99
Query: 99 QLPFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVESMNGDRSKSNPHFRGDHQPASS 158
++ CP C + + +G + + V + G S+ PH G + + +
Sbjct: 100 PEQRWVPCPQCRQST--PVPRGGVAMLDLDLAAFLAVRAXRGP-SRLEPHPPGPRKGSPA 156
Query: 159 LNRNSA 164
+ + A
Sbjct: 157 VTQQPA 162
>gi|308505564|ref|XP_003114965.1| hypothetical protein CRE_28355 [Caenorhabditis remanei]
gi|308259147|gb|EFP03100.1| hypothetical protein CRE_28355 [Caenorhabditis remanei]
Length = 452
Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 55 CPICWESFNVVENLPYVLWCGHTLCKNCV 83
CPIC E F+ + P VL CGH+ C +C+
Sbjct: 25 CPICMEVFDTTSHTPKVLECGHSFCMSCI 53
>gi|115496216|ref|NP_001070079.1| immunity-related GTPase family, f4 [Danio rerio]
gi|115313167|gb|AAI24195.1| Zgc:152960 [Danio rerio]
gi|182889610|gb|AAI65410.1| Zgc:152960 protein [Danio rerio]
Length = 567
Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 43 ASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRA 89
ASLN S EE L CP+C E FN P +L C H++CK C+ L R
Sbjct: 2 ASLNVSVEE-LSCPVCQEIFNN----PVMLSCSHSVCKECLHQLWRT 43
>gi|25395437|pir||D88072 protein ZK1240.1 [imported] - Caenorhabditis elegans
Length = 412
Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 18/92 (19%)
Query: 53 LECPICWESFNVV--ENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
+EC IC F+ V + +P +L CGH++C+ C L + I+CP+C
Sbjct: 38 IECEICNLEFSSVNEDQVPRILKCGHSVCQCCATKLLKNSA------------ISCPFCR 85
Query: 111 MVSLRLICKGNLKFPQKNYYLLWMVESMNGDR 142
+ +K QKN+ LL ++E +R
Sbjct: 86 ETT----SVSAVKDLQKNFALLQIIEHTKTER 113
>gi|73957766|ref|XP_546929.2| PREDICTED: E3 ubiquitin-protein ligase TRIM50 [Canis lupus
familiaris]
Length = 487
Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 4/39 (10%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E+ L+CPIC E F P +L CGH+ CK C++ L R
Sbjct: 11 EDRLQCPICLEVFKE----PMMLQCGHSYCKGCLVSLSR 45
>gi|341892721|gb|EGT48656.1| hypothetical protein CAEBREN_03057 [Caenorhabditis brenneri]
Length = 603
Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 6/57 (10%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
++C IC E FN LP +L CGH C++C+ L + L ITCP C
Sbjct: 16 IKCEICHEPFNHQTRLPKLLPCGHNYCESCIFEL------CLHQEYYLLDSITCPTC 66
>gi|341901659|gb|EGT57594.1| hypothetical protein CAEBREN_11009 [Caenorhabditis brenneri]
Length = 221
Score = 40.8 bits (94), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Query: 55 CPICWESFNVVENLPYVLWCGHTLCKNCVLGL---QRAVIRLPTLPFQLPFFITCPWCNM 111
C IC E FN E P VL CGHTLC C G+ Q+ + P ++ +T N+
Sbjct: 156 CEICMEPFNQ-ERRPKVLKCGHTLCVICCQGMLKEQKIACPMDQAPTEVTEAVTTLPDNI 214
Query: 112 VSLRL 116
V L L
Sbjct: 215 VVLEL 219
>gi|327266926|ref|XP_003218254.1| PREDICTED: tripartite motif-containing protein 59-like [Anolis
carolinensis]
Length = 406
Score = 40.8 bits (94), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 21/110 (19%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTL-----PFQLPFFI 104
EE L C IC+ F+ P VL C HT C+NC+ +V++L + P +LP +
Sbjct: 5 EEELTCSICYSIFDD----PRVLPCSHTFCRNCL----ESVLQLSSTFSIWRPLRLP--L 54
Query: 105 TCPWCNMVSLRLICKGNLKFPQKNYYLLWMVESM----NGDRSKSNPHFR 150
CP C + + + G P NY L ++E + D + N H+R
Sbjct: 55 KCPNCRSI-VEIPPSGTDSLP-VNYALKAIIEKYQREDHPDVATCNEHYR 102
>gi|281344812|gb|EFB20396.1| hypothetical protein PANDA_012667 [Ailuropoda melanoleuca]
Length = 241
Score = 40.8 bits (94), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 4/39 (10%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E+ L+CPIC E F P +L CGH+ CK C++ L R
Sbjct: 11 EDRLQCPICLEVFKE----PMMLQCGHSYCKGCLVSLSR 45
>gi|308486613|ref|XP_003105503.1| hypothetical protein CRE_22441 [Caenorhabditis remanei]
gi|308255469|gb|EFO99421.1| hypothetical protein CRE_22441 [Caenorhabditis remanei]
Length = 155
Score = 40.8 bits (94), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
E+ EC +C+ F+ +P V CGHT C+ C GL
Sbjct: 55 EKENECAVCFFPFDSATRIPRVFSCGHTFCEECAQGL 91
>gi|297286509|ref|XP_001093190.2| PREDICTED: tripartite motif-containing protein 59-like [Macaca
mulatta]
Length = 588
Score = 40.8 bits (94), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 8/83 (9%)
Query: 31 PSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAV 90
P S +L + ++N EE L CPIC+ F P VL C HT C+NC+ + +A
Sbjct: 172 PRGESKDLYGSEKEMHNFEEE-LTCPICYSIFED----PRVLPCSHTFCRNCLENILQAS 226
Query: 91 IRLPT-LPFQLPFFITCPWCNMV 112
P ++P + CP C +
Sbjct: 227 GNFYIWRPLRIP--LKCPNCRSI 247
>gi|348501292|ref|XP_003438204.1| PREDICTED: LOW QUALITY PROTEIN: roquin-like [Oreochromis
niloticus]
Length = 1117
Score = 40.8 bits (94), Expect = 0.68, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC ++F P L CGHT+CK C+ L R
Sbjct: 10 EFLLCPICTQTFEETVRRPISLGCGHTVCKMCLNKLHR 47
>gi|405978708|gb|EKC43077.1| Tripartite motif-containing protein 45 [Crassostrea gigas]
Length = 660
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 16/73 (21%)
Query: 45 LNNSREEG--------LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTL 96
+ +S+EEG CPIC+ESF P +L C HT C NC+ + +
Sbjct: 1 MASSKEEGAPLATDIRTTCPICFESFKT----PRILPCLHTFCHNCLSSYILSTCKTKES 56
Query: 97 PFQLPFFITCPWC 109
P P CP C
Sbjct: 57 PVGFP----CPLC 65
>gi|308455508|ref|XP_003090285.1| hypothetical protein CRE_10721 [Caenorhabditis remanei]
gi|308264899|gb|EFP08852.1| hypothetical protein CRE_10721 [Caenorhabditis remanei]
Length = 323
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 15/128 (11%)
Query: 11 SSLPVTAISGAIRLKNDALKPSQVSSELSDDDASLNNSREEGLECPICWESFN--VVENL 68
S++ T G +R + + VS D+ E G EC IC ++ V ++
Sbjct: 207 STVMKTGEVGTMR-ELRSFDGDGVSYTSVDETGESALMSETGAECEICLMKYDGAVEKHT 265
Query: 69 PYVLW-CGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQK 127
P +L CGHT+C+ C+ L L + + CP+C V+ ++ G++ K
Sbjct: 266 PRILIKCGHTMCQGCIGNL---------LEYNSHQEVCCPFCQQVT--VVNGGSVSHLPK 314
Query: 128 NYYLLWMV 135
NY +L ++
Sbjct: 315 NYGMLKLI 322
>gi|432916788|ref|XP_004079384.1| PREDICTED: LOW QUALITY PROTEIN: roquin-like [Oryzias latipes]
Length = 1133
Score = 40.8 bits (94), Expect = 0.69, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC ++F P L CGHT+CK C+ L R
Sbjct: 10 EFLLCPICTQTFEETVRRPISLGCGHTVCKMCLNKLHR 47
>gi|167963526|ref|NP_001108155.1| roquin [Danio rerio]
Length = 1111
Score = 40.8 bits (94), Expect = 0.69, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC ++F P L CGHT+CK C+ L R
Sbjct: 10 EFLLCPICTQTFEETVRRPISLGCGHTVCKMCLNKLHR 47
>gi|145484677|ref|XP_001428348.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124395433|emb|CAK60950.1| unnamed protein product [Paramecium tetraurelia]
Length = 574
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 44/89 (49%), Gaps = 19/89 (21%)
Query: 51 EGLECPICWESFNVVENLPYVL-WCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
E L CP C FN EN+P +L CGHT+C+ C+ + L + Q I CP
Sbjct: 2 EELICPQCCNIFNEFENIPLMLPDCGHTICQKCIKQM------LMSADGQQ---ICCPED 52
Query: 110 NMVSLRLICKGN---LKFPQKNYYLLWMV 135
N+++ KG +FP KN LL MV
Sbjct: 53 NILA-----KGKTHITEFP-KNCQLLKMV 75
>gi|57997172|emb|CAI46182.1| hypothetical protein [Homo sapiens]
Length = 478
Score = 40.8 bits (94), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC+ F+ + P L C HT+CK C+ L R
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHR 47
>gi|357133624|ref|XP_003568424.1| PREDICTED: uncharacterized protein LOC100826344 [Brachypodium
distachyon]
Length = 821
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 6/68 (8%)
Query: 43 ASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPF 102
A+L E ECP+C F+ +P VL CGH+LC +C+ L P
Sbjct: 4 AALPRPDTEPPECPVCLSPFDAASVVPRVLPCGHSLCGSCISSLP------PASASAGAS 57
Query: 103 FITCPWCN 110
+ CP C+
Sbjct: 58 SLRCPLCS 65
>gi|395530034|ref|XP_003767105.1| PREDICTED: E3 ubiquitin-protein ligase TRIM13 [Sarcophilus
harrisii]
Length = 408
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
EE L CPIC F+ P VL C H CK C+ G+ +R L Q PF CP C
Sbjct: 5 EEDLTCPICCSLFDD----PRVLPCSHNFCKKCLEGILEGNVR-NMLWRQSPF--KCPTC 57
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMN 139
+ + Q NY L +VE N
Sbjct: 58 R----KETSATGVNSLQVNYSLKGIVEKYN 83
>gi|195168185|ref|XP_002024912.1| GL18000 [Drosophila persimilis]
gi|194108342|gb|EDW30385.1| GL18000 [Drosophila persimilis]
Length = 848
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 19/34 (55%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
L CPIC F + P L CGHT+CK C+ L
Sbjct: 12 LNCPICGNEFAASQRFPISLGCGHTICKLCLTTL 45
>gi|191961841|ref|NP_001076328.2| ring finger and CCCH-type zinc finger domains 1 [Danio rerio]
gi|190337303|gb|AAI63288.1| Ring finger and CCCH-type zinc finger domains 1 [Danio rerio]
Length = 1078
Score = 40.8 bits (94), Expect = 0.71, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC ++F P L CGHT+CK C+ L R
Sbjct: 10 EFLLCPICTQTFEENHRKPISLGCGHTVCKMCLNKLHR 47
>gi|402861075|ref|XP_003894933.1| PREDICTED: tripartite motif-containing protein 59 isoform 3 [Papio
anubis]
Length = 588
Score = 40.8 bits (94), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 31 PSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRA 89
P S +L + ++N EE L CPIC+ F P VL C HT C+NC+ + +A
Sbjct: 172 PRGESKDLYGSEKEMHNFEEE-LTCPICYSIFED----PRVLPCSHTFCRNCLENILQA 225
>gi|344289749|ref|XP_003416603.1| PREDICTED: E3 ubiquitin-protein ligase TRIM50-like [Loxodonta
africana]
Length = 487
Score = 40.8 bits (94), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 7/48 (14%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR---AVIRLP 94
E+ L+CPIC E F P +L CGH+ CK C++ L R A +R P
Sbjct: 11 EDRLQCPICLEVFKE----PLMLQCGHSYCKGCLVSLSRHLDADLRCP 54
>gi|312373660|gb|EFR21361.1| hypothetical protein AND_17140 [Anopheles darlingi]
Length = 1909
Score = 40.8 bits (94), Expect = 0.73, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 10/60 (16%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQ---------RAVIRLPTLPFQLP 101
E L CP+C F P L CGHT+C+ C+ L R +R+ +PF +P
Sbjct: 59 EFLSCPVCCNEFAANSRPPISLGCGHTICRTCLATLHHRQCPFDQTREFMRI-VVPFDVP 117
>gi|156717706|ref|NP_001096393.1| tripartite motif containing 32 [Xenopus (Silurana) tropicalis]
gi|134025612|gb|AAI35999.1| LOC100124994 protein [Xenopus (Silurana) tropicalis]
Length = 649
Score = 40.8 bits (94), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 10/63 (15%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
E LECPIC E++ P +L CGHT C C+ L + I + CP+C+
Sbjct: 14 EVLECPICMEAYTEELLRPKLLQCGHTTCTQCLEKLLASNIN----------GVRCPFCS 63
Query: 111 MVS 113
V+
Sbjct: 64 RVT 66
>gi|198462832|ref|XP_001352572.2| GA14160 [Drosophila pseudoobscura pseudoobscura]
gi|198151000|gb|EAL30069.2| GA14160 [Drosophila pseudoobscura pseudoobscura]
Length = 848
Score = 40.8 bits (94), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 19/34 (55%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
L CPIC F + P L CGHT+CK C+ L
Sbjct: 12 LNCPICGNEFAASQRFPISLGCGHTICKLCLTTL 45
>gi|110773277|ref|XP_392690.3| PREDICTED: e3 ubiquitin-protein ligase TRIM23-like [Apis mellifera]
Length = 558
Score = 40.8 bits (94), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 11/96 (11%)
Query: 49 REEGLECPICWESFNVVE-NLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCP 107
R LEC +C E F + +P +L CGHT+C +C+L L+ P + Q F+ CP
Sbjct: 21 RTNVLECRVCEEVFTIDGIKVPRLLHCGHTVCHSCLLRLR------PCMTDQQ--FLLCP 72
Query: 108 WCNMVSLRLICKGNLKFPQKNYYLLWMVESMNGDRS 143
+ + I + N+ +KN+ L+ ++E + S
Sbjct: 73 FDRQPT--GISQNNIYNLKKNFALIELLERLEQSNS 106
>gi|341895886|gb|EGT51821.1| hypothetical protein CAEBREN_19442 [Caenorhabditis brenneri]
Length = 386
Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 21/105 (20%)
Query: 45 LNNSREEGLECPICWESF--NVVENLPYVL-WCGHTLCKNCVLGLQRAVIRLPTLPFQLP 101
L + ++E L+C +C F ++ +LP +L CGHT+C NC + +Q+
Sbjct: 51 LTSVKQESLDCKVCLAPFSDHIPSSLPRILPACGHTICHNCAVTIQKMTFN--------Q 102
Query: 102 FFITCPWCNMVSLRLICKGNLKFPQ--KNYYLLWMVESMNGDRSK 144
I CP+ V+ N+K +N+ +L ++E GD +K
Sbjct: 103 LAIACPFDRTVT-------NMKAENLPRNFAILDLIEE-RGDAAK 139
>gi|47228165|emb|CAF97794.1| unnamed protein product [Tetraodon nigroviridis]
Length = 245
Score = 40.4 bits (93), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 7/63 (11%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
E L+C IC+ FN+ P VL C H LC C+L LQ L P + CP+C
Sbjct: 19 EELDCKICYRWFNLGGRRPKVLACCHRLCSRCLLKLQ-------DLGEAPPGAVVCPFCR 71
Query: 111 MVS 113
+
Sbjct: 72 RTT 74
>gi|410947350|ref|XP_003980412.1| PREDICTED: E3 ubiquitin-protein ligase TRIM13 [Felis catus]
Length = 407
Score = 40.4 bits (93), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
EE L CPIC F+ P VL C H CK C+ G+ +R +L PF CP C
Sbjct: 5 EEDLTCPICCSLFDD----PRVLPCSHNFCKKCLEGILEGTVR-NSLWRSSPF--KCPTC 57
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMN 139
+ + Q NY L +VE N
Sbjct: 58 R----KETSATGVNSLQVNYSLKGIVEKYN 83
>gi|145477745|ref|XP_001424895.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391962|emb|CAK57497.1| unnamed protein product [Paramecium tetraurelia]
Length = 583
Score = 40.4 bits (93), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 44/89 (49%), Gaps = 19/89 (21%)
Query: 51 EGLECPICWESFNVVENLPYVL-WCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
E L CP C FN EN+P +L CGHT+C+ C+ + L + Q I CP
Sbjct: 2 EELICPQCHNIFNEFENIPLMLPDCGHTICQKCIQQM------LMSADGQQ---ICCPED 52
Query: 110 NMVSLRLICKGN---LKFPQKNYYLLWMV 135
N+++ KG +FP KN LL MV
Sbjct: 53 NILA-----KGKTHITEFP-KNCQLLKMV 75
>gi|312083158|ref|XP_003143744.1| hypothetical protein LOAG_08164 [Loa loa]
gi|307761093|gb|EFO20327.1| hypothetical protein LOAG_08164 [Loa loa]
Length = 185
Score = 40.4 bits (93), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 49/108 (45%), Gaps = 20/108 (18%)
Query: 52 GLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNM 111
L CP+C F + ++P++L CGH+ C+NC+ + F+ CP C
Sbjct: 40 ALHCPVC---FCIFASVPFILKCGHSFCQNCIKNIVENSYSERDAVFE------CPMC-- 88
Query: 112 VSLRLICKGNLKFPQKNYYLLWMVESM-----NGDRSKSNPHFRGDHQ 154
R + ++F KN+ +++S+ + + S +P+ R Q
Sbjct: 89 ---RQVISSEIRFT-KNFLADALLQSVCEIAQDENESSVDPNLRISFQ 132
>gi|301776204|ref|XP_002923519.1| PREDICTED: e3 ubiquitin-protein ligase TRIM50-like [Ailuropoda
melanoleuca]
Length = 487
Score = 40.4 bits (93), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 4/39 (10%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E+ L+CPIC E F P +L CGH+ CK C++ L R
Sbjct: 11 EDRLQCPICLEVFKE----PMMLQCGHSYCKGCLVSLSR 45
>gi|134117726|ref|XP_772497.1| hypothetical protein CNBL1120 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255111|gb|EAL17850.1| hypothetical protein CNBL1120 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 415
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 45/102 (44%), Gaps = 10/102 (9%)
Query: 6 GNYFPSSLPVTAISGAIR--LKNDALKPSQVSSELSDDDASLNNSRE--EGLECPICWES 61
G PSS+P+ S L ++K V +E ++ L+ S G CPIC+ +
Sbjct: 182 GRAVPSSIPIEISSDEEDELLGLQSVKAKSVETEKENEGTGLDESSALGTGYHCPICFNA 241
Query: 62 FNVVENLPYVLW-CGHTLCKNCVLGLQRAVIRLPTLPFQLPF 102
N P +L CGH LC C+ A IR P+ PF
Sbjct: 242 PN-----PAILTPCGHILCAGCLHSSLLAAIRRNPNPYPNPF 278
>gi|302677210|ref|XP_003028288.1| hypothetical protein SCHCODRAFT_112558 [Schizophyllum commune H4-8]
gi|300101976|gb|EFI93385.1| hypothetical protein SCHCODRAFT_112558 [Schizophyllum commune H4-8]
Length = 266
Score = 40.4 bits (93), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 12/68 (17%)
Query: 43 ASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPF 102
+S+N ++ L C +C+ ++ P VL CGH C++C++ + R L F
Sbjct: 128 SSVNEEKDIALSCNVCF----TADSRPRVLLCGHVTCESCLVAMYRHA--------PLKF 175
Query: 103 FITCPWCN 110
+ CP C
Sbjct: 176 LLECPLCQ 183
>gi|47218749|emb|CAG02735.1| unnamed protein product [Tetraodon nigroviridis]
Length = 89
Score = 40.4 bits (93), Expect = 0.78, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 8/63 (12%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
E EC +C+ +++ V P +L CGHT C C+ + L TL +CP C
Sbjct: 31 EDTECAVCFCTYDNVFKTPKLLACGHTFCLECLARINVTSAELKTL--------SCPICR 82
Query: 111 MVS 113
V+
Sbjct: 83 EVT 85
>gi|390177948|ref|XP_001358564.3| GA10686 [Drosophila pseudoobscura pseudoobscura]
gi|388859265|gb|EAL27705.3| GA10686 [Drosophila pseudoobscura pseudoobscura]
Length = 326
Score = 40.4 bits (93), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 23/107 (21%)
Query: 14 PVTAISGAIRLKNDALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLW 73
P TA + + + +D P + ++ N S EG +CP+C + ++ P
Sbjct: 239 PTTACTTSDVVASDVSPPKRKRNDQ-------NQSSGEGYKCPVCLDCL--LQREPSSTK 289
Query: 74 CGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN-MVSLRLICK 119
CGH C+ C+ RA + CP CN +S+R + +
Sbjct: 290 CGHVFCRQCIESAIRATHK-------------CPMCNKKLSIRQVTR 323
>gi|313242824|emb|CBY39586.1| unnamed protein product [Oikopleura dioica]
Length = 104
Score = 40.4 bits (93), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 39/92 (42%), Gaps = 16/92 (17%)
Query: 22 IRLKNDALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKN 81
IR +N+ LK +E D+ E L+CPIC +N ++ + CGH K+
Sbjct: 19 IRKENENLKKKLEKTEDKFDEL------EARLQCPICLSDYNDQQHYTVKIKCGHVFGKS 72
Query: 82 CVLGLQRAVIRLPTLPFQLPFFITCPWCNMVS 113
C LQ+A R P CP C S
Sbjct: 73 C---LQKAFTRSGVSPH-------CPICKKAS 94
>gi|126302657|ref|XP_001367091.1| PREDICTED: RING finger protein 208-like [Monodelphis domestica]
Length = 251
Score = 40.4 bits (93), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 8/59 (13%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
E LECP C ++N+ + P VL C H++C+ C+ L + + FI+CP C
Sbjct: 130 EPLECPTCGHTYNLTQRRPRVLSCLHSVCEQCLQILYESCPKY--------KFISCPTC 180
>gi|149756002|ref|XP_001504541.1| PREDICTED: e3 ubiquitin-protein ligase TRIM50-like [Equus
caballus]
Length = 487
Score = 40.4 bits (93), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 4/39 (10%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E+ L+CPIC E F P +L CGH+ CK C++ L R
Sbjct: 11 EDRLQCPICLEVFKE----PLMLQCGHSYCKGCLVSLSR 45
>gi|395506530|ref|XP_003757585.1| PREDICTED: RING finger protein 208 [Sarcophilus harrisii]
Length = 251
Score = 40.4 bits (93), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 8/59 (13%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
E LECP C ++N+ + P VL C H++C+ C+ L + + FI+CP C
Sbjct: 130 EPLECPTCGHTYNLTQRRPRVLSCLHSVCEQCLQILYESCPKY--------KFISCPTC 180
>gi|49115787|gb|AAH73534.1| LOC443659 protein, partial [Xenopus laevis]
Length = 228
Score = 40.4 bits (93), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 49/119 (41%), Gaps = 22/119 (18%)
Query: 23 RLKNDALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNC 82
R K+ + S +SSE + L N ECP+C+E F V L C H+ C +C
Sbjct: 8 RTKDTKGQASAMSSEEGGKETPLPN------ECPVCYEQFQVPNTSERRLSCSHSFCHDC 61
Query: 83 VL-----GLQRAVIRLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVE 136
++ Q ++ I CP C V+ + K + P K+ L ++E
Sbjct: 62 LVKYLLTAKQEGSVKK---------NIICPLCRYVT--FLSKRGIILPPKSGELHQILE 109
>gi|195011991|ref|XP_001983420.1| GH15595 [Drosophila grimshawi]
gi|193896902|gb|EDV95768.1| GH15595 [Drosophila grimshawi]
Length = 916
Score = 40.4 bits (93), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
L CPIC F+ + +P L CGHT+C+ C+ L
Sbjct: 12 LNCPICCNEFDGSQRVPISLGCGHTICRPCLTTL 45
>gi|145513790|ref|XP_001442806.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410159|emb|CAK75409.1| unnamed protein product [Paramecium tetraurelia]
Length = 493
Score = 40.4 bits (93), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Query: 45 LNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFI 104
LN S+ C +C + P L C H+LC C L +Q I+ T Q F I
Sbjct: 2 LNKSQNSMQLCQLCK----MTSQNPIQLICSHSLCLKCGLKIQ---IQENTSQIQNKFRI 54
Query: 105 TCPWCNMVSL 114
CP CN ++L
Sbjct: 55 QCPKCNKITL 64
>gi|403348761|gb|EJY73824.1| hypothetical protein OXYTRI_04923 [Oxytricha trifallax]
Length = 427
Score = 40.4 bits (93), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 13/54 (24%), Positives = 26/54 (48%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITC 106
L C C + +N P + CGH +C+ C ++ +++ +Q P ++C
Sbjct: 2 LTCKACKKIYNTTTRQPQFMTCGHPICQQCFTQYEQQALKIQDEKYQCPIKVSC 55
>gi|58270304|ref|XP_572308.1| hypothetical protein CNH01180 [Cryptococcus neoformans var.
neoformans JEC21]
gi|57228566|gb|AAW45001.1| hypothetical protein CNH01180 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 415
Score = 40.4 bits (93), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 45/102 (44%), Gaps = 10/102 (9%)
Query: 6 GNYFPSSLPVTAISGAIR--LKNDALKPSQVSSELSDDDASLNNSRE--EGLECPICWES 61
G PSS+P+ S L ++K V +E ++ L+ S G CPIC+ +
Sbjct: 182 GRAVPSSIPIEISSDEEDELLGLQSVKAKSVETEKENEGTGLDESSALGTGYHCPICFNA 241
Query: 62 FNVVENLPYVLW-CGHTLCKNCVLGLQRAVIRLPTLPFQLPF 102
N P +L CGH LC C+ A IR P+ PF
Sbjct: 242 PN-----PAILTPCGHILCAGCLHSSLLAAIRRNPNPYPNPF 278
>gi|26379548|dbj|BAC25419.1| unnamed protein product [Mus musculus]
Length = 407
Score = 40.4 bits (93), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
EE L CPIC F+ P VL C H CK C+ GL +R +L PF CP C
Sbjct: 5 EEDLTCPICCSLFDD----PRVLPCSHNFCKKCLEGLLEGNVR-NSLRRPSPF--KCPTC 57
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMN 139
+ + Q NY L +VE N
Sbjct: 58 R----KETSATGVNSLQVNYSLKGIVEKYN 83
>gi|281339600|gb|EFB15184.1| hypothetical protein PANDA_012046 [Ailuropoda melanoleuca]
Length = 409
Score = 40.4 bits (93), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
EE L CPIC F+ P VL C H CK C+ G+ +R +L PF CP C
Sbjct: 7 EEDLTCPICCSLFDD----PRVLPCSHNFCKKCLEGILEGTVR-NSLWRSSPF--KCPTC 59
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMN 139
+ + Q NY L +VE N
Sbjct: 60 R----KETSATGVNSLQVNYSLKGIVEKYN 85
>gi|149063052|gb|EDM13375.1| tripartite motif protein 50, isoform CRA_d [Rattus norvegicus]
Length = 255
Score = 40.4 bits (93), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 14/60 (23%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
++ L+CPIC E F P +L CGH+ CKNC L +L L + CP C
Sbjct: 11 QDQLQCPICLEVFKE----PLMLQCGHSYCKNC----------LDSLSEHLDSELRCPVC 56
>gi|405957745|gb|EKC23932.1| Tripartite motif-containing protein 45 [Crassostrea gigas]
Length = 631
Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 8/55 (14%)
Query: 55 CPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
CPIC+ESF P +L C HT C NC+ + + P P CP C
Sbjct: 19 CPICFESFKT----PKILPCMHTFCHNCLSSYILSTCKTKESPVGFP----CPLC 65
>gi|348528194|ref|XP_003451603.1| PREDICTED: E3 ubiquitin-protein ligase TRIM13-like [Oreochromis
niloticus]
Length = 402
Score = 40.4 bits (93), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 29/60 (48%), Gaps = 9/60 (15%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
EE L CPIC F P VL C H+ CK C+ GL R P F+ PF CP C
Sbjct: 5 EEELTCPICCGLFED----PRVLLCSHSFCKKCLEGLLEGN-RGPA--FRTPF--KCPTC 55
>gi|308457718|ref|XP_003091226.1| hypothetical protein CRE_05274 [Caenorhabditis remanei]
gi|308257914|gb|EFP01867.1| hypothetical protein CRE_05274 [Caenorhabditis remanei]
Length = 529
Score = 40.4 bits (93), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 54/130 (41%), Gaps = 18/130 (13%)
Query: 12 SLPVTAISGAIRLKNDALKPSQVSSELSDDDASLNNSRE-----EGLECPICWESFNVVE 66
++P G I + N + ++ E+ + S++ G EC IC FN
Sbjct: 412 TIPSMMDLGIILIGNGMIMNNENEEEIKMSSVKVQKSKKTAGNSSGPECKICLLPFNPST 471
Query: 67 NLPYVL-WCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFP 125
+P +L CGHT+C C L Q + I CP C ++ + G K+
Sbjct: 472 VIPKILKECGHTVCGECADKLYGK---------QKQYRIICPICQKATVVI---GGAKYL 519
Query: 126 QKNYYLLWMV 135
KN+ LL ++
Sbjct: 520 PKNFELLELI 529
>gi|301775130|ref|XP_002922985.1| PREDICTED: tripartite motif-containing protein 13-like [Ailuropoda
melanoleuca]
Length = 407
Score = 40.4 bits (93), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
EE L CPIC F+ P VL C H CK C+ G+ +R +L PF CP C
Sbjct: 5 EEDLTCPICCSLFDD----PRVLPCSHNFCKKCLEGILEGTVR-NSLWRSSPF--KCPTC 57
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMN 139
+ + Q NY L +VE N
Sbjct: 58 R----KETSATGVNSLQVNYSLKGIVEKYN 83
>gi|335298570|ref|XP_003358332.1| PREDICTED: RING finger protein 222-like [Sus scrofa]
Length = 248
Score = 40.4 bits (93), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Query: 52 GLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNM 111
G ECP+C+E +E L CGH C +C++ + + Q+ I CP C
Sbjct: 11 GSECPVCYERLRDLEGAGRTLSCGHVFCHDCLVKYLLST----RVDGQVQRTIVCPVCRY 66
Query: 112 VSLRLICKGNLKFPQK 127
V+ + K + ++P K
Sbjct: 67 VT--FLSKKSSRWPSK 80
>gi|444521177|gb|ELV13118.1| RING finger protein 224 [Tupaia chinensis]
Length = 148
Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 8/75 (10%)
Query: 39 SDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPF 98
+D ++ + +C IC+ ++++ +LP L+CGHT C+ CV L V +
Sbjct: 4 TDSTQAVGGAAGTRSDCTICYSAYDLARHLPRRLYCGHTFCQTCVRQLDTLVHQQ----- 58
Query: 99 QLPFFITCPWCNMVS 113
+I CP C +
Sbjct: 59 ---RWIPCPQCRQST 70
>gi|341887933|gb|EGT43868.1| hypothetical protein CAEBREN_25261 [Caenorhabditis brenneri]
Length = 285
Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 55 CPICWESFNVVENLPYVLWCGHTLCKNCV 83
C +C E F + PYVL CGHT C+ C+
Sbjct: 165 CSLCTERFRIFFRRPYVLACGHTFCQQCL 193
>gi|74187601|dbj|BAE36743.1| unnamed protein product [Mus musculus]
Length = 252
Score = 40.4 bits (93), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
EE L CPIC F+ P VL C H CK C+ GL +R +L PF CP C
Sbjct: 5 EEDLTCPICCSLFDD----PRVLPCSHNFCKKCLEGLLEGNVR-NSLWRPSPF--KCPTC 57
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMN 139
+ + Q NY L +VE N
Sbjct: 58 R----KETSATGVNSLQVNYSLKGIVEKYN 83
>gi|428184826|gb|EKX53680.1| hypothetical protein GUITHDRAFT_132763 [Guillardia theta CCMP2712]
Length = 1126
Score = 40.4 bits (93), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 36/76 (47%), Gaps = 19/76 (25%)
Query: 38 LSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLG-LQRAVIRLPTL 96
L DD+A NNS +G EC IC + P L CGH C +CV+ L+R++I
Sbjct: 73 LKDDEA--NNSPGDG-ECAICQSDLHA----PVKLVCGHIFCDDCVMQWLERSLID---- 121
Query: 97 PFQLPFFITCPWCNMV 112
TCP C V
Sbjct: 122 -------GTCPLCRQV 130
>gi|297480908|ref|XP_002691729.1| PREDICTED: RING finger protein 208 [Bos taurus]
gi|358421556|ref|XP_003585015.1| PREDICTED: RING finger protein 208 [Bos taurus]
gi|296482008|tpg|DAA24123.1| TPA: ring finger protein 208-like [Bos taurus]
Length = 266
Score = 40.4 bits (93), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 8/59 (13%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
E LECP C ++N + P VL C H++C+ C+ L + + FI+CP C
Sbjct: 144 EPLECPTCGHTYNATQRRPRVLSCLHSVCEQCLQILYESCPKY--------KFISCPTC 194
>gi|403415634|emb|CCM02334.1| predicted protein [Fibroporia radiculosa]
Length = 408
Score = 40.4 bits (93), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 13/68 (19%)
Query: 42 DASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLP 101
D +++S EE ECPIC E + N L C HT C++C++ +
Sbjct: 152 DLMVSSSIEEDEECPICMEQLKL--NKCASLPCEHTFCESCIMQISPGS----------- 198
Query: 102 FFITCPWC 109
+ITCP C
Sbjct: 199 DYITCPQC 206
>gi|73989110|ref|XP_849766.1| PREDICTED: E3 ubiquitin-protein ligase TRIM13 [Canis lupus
familiaris]
Length = 407
Score = 40.4 bits (93), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
EE L CPIC F+ P VL C H CK C+ G+ +R +L PF CP C
Sbjct: 5 EEDLTCPICCSLFDD----PRVLPCSHNFCKKCLEGILEGTVR-NSLWRASPF--KCPTC 57
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMN 139
+ + Q NY L +VE N
Sbjct: 58 R----KETSATGVNSLQVNYSLKGIVEKYN 83
>gi|308480139|ref|XP_003102277.1| hypothetical protein CRE_05896 [Caenorhabditis remanei]
gi|308262203|gb|EFP06156.1| hypothetical protein CRE_05896 [Caenorhabditis remanei]
Length = 1715
Score = 40.4 bits (93), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
Query: 37 ELSDDDASLNNSREEGLECPICWESFNVVEN--LPYVLWCGHTLCKNCVLGLQR 88
E+ ++ A+ + +R + C IC E F V P VL CGHT+C +CV LQ+
Sbjct: 1637 EIEENRAAHSQTRHQ---CEICLEQFTDVAGNRAPKVLRCGHTICASCVNSLQQ 1687
>gi|390351280|ref|XP_003727627.1| PREDICTED: uncharacterized protein LOC100887864 [Strongylocentrotus
purpuratus]
Length = 773
Score = 40.4 bits (93), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 12/100 (12%)
Query: 41 DDASLNNSREEGLECPICWESF-NVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQ 99
D SL++ R G +C +C+ SF E++P +L CGHT C C+ L R
Sbjct: 2 DSLSLDDQR--GRQCNVCYHSFARDGEHVPRILSCGHTYCTVCLSKLVGKFSRGK----- 54
Query: 100 LPFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVESMN 139
I CP C + N++ KN+ +L ++E +
Sbjct: 55 ----ICCPTCKTDTSIPGLVNNVQKLAKNFAVLDILEGLE 90
>gi|380792909|gb|AFE68330.1| roquin, partial [Macaca mulatta]
Length = 64
Score = 40.4 bits (93), Expect = 0.93, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
L CPIC ++F+ P L CGHT+CK C+ L R
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHR 47
>gi|432912144|ref|XP_004078849.1| PREDICTED: E3 ubiquitin-protein ligase RNF182-like [Oryzias
latipes]
Length = 264
Score = 40.4 bits (93), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 37 ELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTL 96
+ S+D S E +EC IC+ +N+ P VL C H LC C++ ++ L L
Sbjct: 6 QTSEDGNSAFIQSAEEMECKICYCMYNLGSRRPKVLECCHRLCSKCLI----KILDLGEL 61
Query: 97 PFQLPFFITCPWCNMVS 113
P P + CP+C ++
Sbjct: 62 P---PNALVCPFCRCIT 75
>gi|17509103|ref|NP_491267.1| Protein T20F5.7 [Caenorhabditis elegans]
gi|351060152|emb|CCD67782.1| Protein T20F5.7 [Caenorhabditis elegans]
Length = 294
Score = 40.4 bits (93), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 10/62 (16%)
Query: 55 CPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFIT-CPWCNMVS 113
C IC F+ P VL CGHT+C+ C L+ F P + CP C +
Sbjct: 15 CLICIREFDTKTRKPKVLHCGHTVCEECTDNLR---------DFNAPLLVVRCPTCRQFT 65
Query: 114 LR 115
R
Sbjct: 66 KR 67
>gi|345806149|ref|XP_848385.2| PREDICTED: RING finger protein 224 [Canis lupus familiaris]
Length = 154
Score = 40.4 bits (93), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 11/79 (13%)
Query: 35 SSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLP 94
S ++S++ + ++ R + C IC+ ++++ +LP L+CGHT C+ CV L
Sbjct: 6 SPQVSEEGTAASSRRGD---CIICYSAYDLTGHLPRRLYCGHTFCQACVRQLD------- 55
Query: 95 TLPFQLPFFITCPWCNMVS 113
P +I CP C +
Sbjct: 56 -APAHEQRWIPCPQCRQST 73
>gi|341888293|gb|EGT44228.1| hypothetical protein CAEBREN_07428 [Caenorhabditis brenneri]
Length = 211
Score = 40.4 bits (93), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
Query: 55 CPICWESFNVVENL--PYVLWCGHTLCKNCV 83
CPIC+E + +++ P VL CGHT+C++C
Sbjct: 134 CPICYEKYTERDDVRTPRVLACGHTICEDCA 164
>gi|27881691|gb|AAH44642.1| RC3H2 protein [Homo sapiens]
Length = 506
Score = 40.4 bits (93), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC+ F+ + P L C HT+CK C+ L R
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHR 47
>gi|297480904|ref|XP_002691745.1| PREDICTED: RING finger protein 224 [Bos taurus]
gi|358421560|ref|XP_003585017.1| PREDICTED: RING finger protein 224 [Bos taurus]
gi|296481990|tpg|DAA24105.1| TPA: hypothetical protein BOS_12229 [Bos taurus]
Length = 256
Score = 40.0 bits (92), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 8/60 (13%)
Query: 54 ECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVS 113
+C +C+ ++++ +LP L+CGHT+C+ CV L P ++ CP C +
Sbjct: 122 DCIVCYSAYDLAGHLPRRLYCGHTVCQACVRRL--------ATPAPAQRWVPCPQCRQST 173
>gi|431900806|gb|ELK08247.1| RING finger protein 183 [Pteropus alecto]
Length = 188
Score = 40.0 bits (92), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 44 SLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
++ SRE ECP+CW FN + + P VL C H+ C C+ L
Sbjct: 2 AVQQSREP--ECPVCWNPFNNMFHTPKVLDCCHSFCVECLAHL 42
>gi|326931128|ref|XP_003211686.1| PREDICTED: e3 ubiquitin-protein ligase TRIM50-like [Meleagris
gallopavo]
Length = 818
Score = 40.0 bits (92), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
E+ L CPIC E F P +L CGH+ CK+CVL L
Sbjct: 11 EDQLLCPICLEVFKE----PLMLQCGHSYCKSCVLSL 43
>gi|168013268|ref|XP_001759323.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689636|gb|EDQ76007.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 886
Score = 40.0 bits (92), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 25/35 (71%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQ 87
+EC +C + ++ E+ P VL CGH++C++CV LQ
Sbjct: 3 VECAVCLQVYDEGEHTPRVLSCGHSVCQSCVAELQ 37
>gi|118099144|ref|XP_001234238.1| PREDICTED: RING finger protein 224-like [Gallus gallus]
Length = 168
Score = 40.0 bits (92), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 23/33 (69%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCV 83
+ LEC IC+ S+++ LP L+CGHT C+ C+
Sbjct: 29 QKLECIICYSSYDLCGRLPRRLYCGHTFCQACL 61
>gi|443687451|gb|ELT90423.1| hypothetical protein CAPTEDRAFT_43805, partial [Capitella teleta]
Length = 451
Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 21/37 (56%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQ 87
E L CPIC SF+ P L C HT CK C+L LQ
Sbjct: 10 EFLVCPICTHSFDGSALKPISLACSHTFCKACLLKLQ 46
>gi|322695648|gb|EFY87453.1| RING finger domain protein, putative [Metarhizium acridum CQMa 102]
Length = 527
Score = 40.0 bits (92), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 57/131 (43%), Gaps = 24/131 (18%)
Query: 30 KPSQVSSELSD---DDASLNNSREEGLE---CPICWESFNVVENLPYVLWCGHTLCKNCV 83
K Q+SSE + D AS + EEG E C IC E F V E++ VL C H +CV
Sbjct: 343 KSGQLSSEQTSKAPDAASAHAENEEGEEHLGCSICTEDFTVGEDV-RVLPCNHQFHPHCV 401
Query: 84 LGLQRAVIRLPTLPFQLPFFITCPWCNMVSLRLICKG----NLKFPQKNYYLLWMVESMN 139
P+ + TCP C + LR +G + P++N ++E +
Sbjct: 402 ------------DPWLVNVSGTCPLCRL-DLRPGRQGPNDQSSSNPEENLAPPLVLEGED 448
Query: 140 GDRSKSNPHFR 150
G+ S + R
Sbjct: 449 GESSHATHSHR 459
>gi|221481110|gb|EEE19518.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 248
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 9/48 (18%)
Query: 46 NNSREE--------GLECPICWESFNVVE-NLPYVLWCGHTLCKNCVL 84
+ +REE G ECPIC E F E P VL CGH++C C+L
Sbjct: 15 DEAREEEVARASHAGHECPICLEKFECGEMRRPKVLTCGHSICFLCIL 62
>gi|237829797|ref|XP_002364196.1| hypothetical protein TGME49_109280 [Toxoplasma gondii ME49]
gi|211961860|gb|EEA97055.1| hypothetical protein TGME49_109280 [Toxoplasma gondii ME49]
gi|221507060|gb|EEE32664.1| conserved hypothetical protein [Toxoplasma gondii VEG]
Length = 248
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 9/48 (18%)
Query: 46 NNSREE--------GLECPICWESFNVVE-NLPYVLWCGHTLCKNCVL 84
+ +REE G ECPIC E F E P VL CGH++C C+L
Sbjct: 15 DEAREEEVARASHAGHECPICLEKFECGEMRRPKVLTCGHSICFLCIL 62
>gi|345325019|ref|XP_001513735.2| PREDICTED: E3 ubiquitin-protein ligase TRIM13 [Ornithorhynchus
anatinus]
Length = 408
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
EE L CPIC F+ P VL C H CK C+ G+ +R L PF CP C
Sbjct: 5 EEDLTCPICCSLFDD----PRVLPCSHNFCKKCLEGILDGNVR-NMLWRSAPF--KCPTC 57
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMN 139
+ + + Q NY L +VE N
Sbjct: 58 R----KEVSATGVSSLQVNYSLKGIVEKYN 83
>gi|367035710|ref|XP_003667137.1| hypothetical protein MYCTH_2312624 [Myceliophthora thermophila ATCC
42464]
gi|347014410|gb|AEO61892.1| hypothetical protein MYCTH_2312624 [Myceliophthora thermophila ATCC
42464]
Length = 576
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 36/85 (42%), Gaps = 17/85 (20%)
Query: 31 PSQVSSELSDDDASLNNS----REEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
P+ + E D D NNS EE L CPIC + F V E++ VL C H C+
Sbjct: 328 PAGGTGEEPDKDKEGNNSGGLSTEEHLGCPICTDDFTVGEDV-RVLPCNHKFHPPCI--- 383
Query: 87 QRAVIRLPTLPFQLPFFITCPWCNM 111
P+ + TCP C +
Sbjct: 384 ---------DPWLVNISGTCPLCRL 399
>gi|156717260|ref|NP_001096172.1| ring finger protein 182 [Xenopus (Silurana) tropicalis]
gi|134026042|gb|AAI35582.1| rnf182 protein [Xenopus (Silurana) tropicalis]
Length = 246
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 31/53 (58%)
Query: 34 VSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
++ +L++D++ N + LEC IC+ +N+ + P VL C H +C C+ L
Sbjct: 1 MTGQLTEDNSESPNLNPDELECKICYNRYNLRQRKPKVLGCCHRVCAKCLYKL 53
>gi|159112503|ref|XP_001706480.1| Hypothetical protein GL50803_17329 [Giardia lamblia ATCC 50803]
gi|157434577|gb|EDO78806.1| hypothetical protein GL50803_17329 [Giardia lamblia ATCC 50803]
Length = 374
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQL 100
E LECP C +FN P L CGHT CK C+ ++ ++ L +++
Sbjct: 2 ELLECPACNRTFNA----PITLKCGHTFCKGCLSSKRQKACKICRLRYRI 47
>gi|145478817|ref|XP_001425431.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124392501|emb|CAK58033.1| unnamed protein product [Paramecium tetraurelia]
Length = 497
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 19/89 (21%)
Query: 51 EGLECPICWESFNVVENLPYVL-WCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
E L CP C FN EN P +L CGHT+C+ C+ + L Q I+CP
Sbjct: 2 EELICPQCHNIFNEFENTPLMLPDCGHTICQQCIQFM------LSNSDGQQ---ISCPED 52
Query: 110 NMVSLRLICKGNL---KFPQKNYYLLWMV 135
N+++ +G L +FP KN LL M+
Sbjct: 53 NILA-----RGKLNISEFP-KNCQLLKMI 75
>gi|17563664|ref|NP_506687.1| Protein T01C3.3 [Caenorhabditis elegans]
gi|3879246|emb|CAB01659.1| Protein T01C3.3 [Caenorhabditis elegans]
Length = 202
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 54 ECPICWESFNVVENLPYVLWCGHTLCKNCV 83
EC +C++ F+ +P V+ CGHTLC C+
Sbjct: 132 ECLVCYQKFDENTRIPRVMDCGHTLCDFCI 161
>gi|402592724|gb|EJW86651.1| ADP-ribosylation factor [Wuchereria bancrofti]
Length = 581
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 15/90 (16%)
Query: 50 EEGLECPICWESFNVVENLPYVL-WCGHTLCKNCVLGLQRAVIRLPTLPFQLPFF-ITCP 107
+ GLECP+C ES+ P VL CGHT+C+ C L + P + CP
Sbjct: 6 DTGLECPLCHESYASEIRTPRVLHGCGHTVCQMCCSSL---------VDLSAPIAQVICP 56
Query: 108 WCNMVSLRLI-CKGNLKFPQKNYYLLWMVE 136
+ V+L C +LK KN+ L+ ++E
Sbjct: 57 FDRTVTLLAEPCVFSLK---KNFALIEIIE 83
>gi|344271473|ref|XP_003407562.1| PREDICTED: RING finger protein 183-like [Loxodonta africana]
Length = 192
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 21/41 (51%)
Query: 46 NNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
RE ECP+CW FN + P +L C H+ C C+ L
Sbjct: 4 QRGREPEAECPVCWNPFNNTFHTPKMLNCCHSFCVECLAHL 44
>gi|348534001|ref|XP_003454492.1| PREDICTED: E3 ubiquitin-protein ligase NHLRC1-like [Oreochromis
niloticus]
Length = 412
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 53 LECPICWESFNVV--ENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPF 98
LEC +C+E+F+ E P L CGH LC C+ L ++R PF
Sbjct: 25 LECKVCFETFSSQQRERRPQNLSCGHVLCLECITALSHPLLRKLECPF 72
>gi|302689153|ref|XP_003034256.1| hypothetical protein SCHCODRAFT_106578 [Schizophyllum commune H4-8]
gi|300107951|gb|EFI99353.1| hypothetical protein SCHCODRAFT_106578, partial [Schizophyllum
commune H4-8]
Length = 236
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 12/66 (18%)
Query: 45 LNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFI 104
+ S++ + C +C+ E+ P VL CGHTLC++C+ + A P + F+
Sbjct: 142 IKESKDLVMSCTVCF----TAESTPRVLGCGHTLCESCLTAMYHA------KPSK--SFL 189
Query: 105 TCPWCN 110
CP C+
Sbjct: 190 ACPICD 195
>gi|301612587|ref|XP_002935797.1| PREDICTED: tripartite motif-containing protein 13-like [Xenopus
(Silurana) tropicalis]
gi|384952209|sp|F6ZQ54.1|TRI13_XENTR RecName: Full=Tripartite motif containing 13
Length = 408
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
EE L CPIC F+ P VL C H CK C+ G+ R T+ ++ P CP C
Sbjct: 5 EEDLTCPICCSLFDD----PRVLPCSHNFCKKCLDGVLEENSR--TMQWR-PSSFKCPTC 57
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMN 139
+ + G Q NY L +VE N
Sbjct: 58 RKETPTMGVNG----LQVNYLLKGIVEKYN 83
>gi|255543935|ref|XP_002513030.1| ankyrin-repeat containing protein, putative [Ricinus communis]
gi|223548041|gb|EEF49533.1| ankyrin-repeat containing protein, putative [Ricinus communis]
Length = 1617
Score = 40.0 bits (92), Expect = 1.1, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 12/83 (14%)
Query: 55 CPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSL 114
C +C +N E +P +L CGH CK C L R L + CP C VS
Sbjct: 6 CSVCQTRYNEEERVPLLLQCGHGFCKEC---LSR------MFSSSLDTTLACPRCRHVS- 55
Query: 115 RLICKGNLKFPQKNYYLLWMVES 137
+ ++ +KNY +L ++ +
Sbjct: 56 --VVGNSVNALRKNYAVLSLLSA 76
>gi|71980573|ref|NP_491738.2| Protein RNF-1 [Caenorhabditis elegans]
gi|351065261|emb|CCD61221.1| Protein RNF-1 [Caenorhabditis elegans]
Length = 381
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 14/82 (17%)
Query: 54 ECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVS 113
+C +C++ FN L L CGHT C C+ R V P + CP C
Sbjct: 21 QCQVCYQPFNETTKLARSLHCGHTFCTECI----RNVQNYGNSP-----HLECPTC---- 67
Query: 114 LRLICKGNLKFPQKNYYLLWMV 135
R K N++ N+ ++ +
Sbjct: 68 -RAETKSNIENVAPNFSIMELA 88
>gi|390360805|ref|XP_003729776.1| PREDICTED: E3 ubiquitin-protein ligase TRIM50-like
[Strongylocentrotus purpuratus]
Length = 308
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 12/59 (20%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
E L CP+C E F P +L CGHT CK C+ + + F+ CP C
Sbjct: 11 ESLACPMCLEVFKA----PTLLACGHTFCKECLDKYDK--------KHRGQDFMECPLC 57
>gi|403370525|gb|EJY85127.1| hypothetical protein OXYTRI_17017 [Oxytricha trifallax]
Length = 292
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/54 (24%), Positives = 26/54 (48%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITC 106
L C C + +N P + CGH +C+ C ++ +++ +Q P ++C
Sbjct: 2 LTCKACKKIYNTTTRQPQFMTCGHPICQQCFTQYEQQALKIQDEKYQCPIKVSC 55
>gi|291233511|ref|XP_002736696.1| PREDICTED: predicted protein-like, partial [Saccoglossus
kowalevskii]
Length = 1052
Score = 40.0 bits (92), Expect = 1.2, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 22/117 (18%)
Query: 35 SSELSDDDAS---LNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVI 91
S ++ DAS LN E+ L C IC E +N P VL C HT C+ C++
Sbjct: 349 SQDIVFKDASKSLLNEISEDFLSCSICLEIYNN----PKVLPCLHTFCQQCLV------- 397
Query: 92 RLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVESMNGDRSKSNPH 148
T + + C C R+ C ++ + N++L ++++ R+ S H
Sbjct: 398 ---TFKAKSGGILKCATC-----RIQCNTPIQELKSNFFLSSLLDTYQRQRNLSTEH 446
>gi|170044698|ref|XP_001849974.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167867749|gb|EDS31132.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 127
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 40/103 (38%), Gaps = 27/103 (26%)
Query: 11 SSLPVTAISGAIRLKNDALKPSQVSSELSDDDASLNNSRE-------------------- 50
S L V +SG + D +P + S + +A N+SRE
Sbjct: 14 SRLDVATLSGLDQSTTDRTEPEENHS--NQQNAKTNSSRETSTQTNARNVFFTIYRMPIQ 71
Query: 51 -----EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CP+C F P L CGHT+C+ C+ L R
Sbjct: 72 APQWTEFLSCPVCCNEFAANLRPPISLGCGHTICRTCLATLHR 114
>gi|114614087|ref|XP_001154917.1| PREDICTED: tripartite motif-containing protein 73 isoform 2 [Pan
troglodytes]
Length = 250
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 14/60 (23%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
E+ L+CPIC E F P +L CGH+ CK C++ +L + L + CP C
Sbjct: 11 EDRLQCPICLEVFKE----PLMLQCGHSYCKGCLV----------SLSYHLDAELRCPVC 56
>gi|341895819|gb|EGT51754.1| hypothetical protein CAEBREN_22252 [Caenorhabditis brenneri]
Length = 650
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 40/92 (43%), Gaps = 15/92 (16%)
Query: 54 ECPICWESF-NVVENL-PYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNM 111
EC IC + + VE+L P +L CGHT C CV + L CP C
Sbjct: 160 ECTICCSEYQDDVEDLTPRILTCGHTFCAGCVKNVAGGAQTLK-----------CPTCRS 208
Query: 112 VSLRLICKGNLKFPQKNYYLLWMVESMNGDRS 143
V+ L +G P KN+ LL V ++S
Sbjct: 209 VTT-LNSQGVKGLP-KNFSLLDSVREKQQEQS 238
>gi|109467859|ref|XP_345327.3| PREDICTED: RING finger protein 224-like [Rattus norvegicus]
gi|109469535|ref|XP_001077413.1| PREDICTED: RING finger protein 224-like [Rattus norvegicus]
Length = 156
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 11/74 (14%)
Query: 40 DDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQ 99
++ A+L SR + C IC+ ++++ +LP L+CGHT C+ C+ L P
Sbjct: 11 EEGAALTASRND---CIICYSAYDLSVHLPRRLYCGHTFCQACMRRLD--------TPAH 59
Query: 100 LPFFITCPWCNMVS 113
+I CP C +
Sbjct: 60 EQHWIPCPQCRQST 73
>gi|308456636|ref|XP_003090744.1| hypothetical protein CRE_03515 [Caenorhabditis remanei]
gi|308260770|gb|EFP04723.1| hypothetical protein CRE_03515 [Caenorhabditis remanei]
Length = 1288
Score = 40.0 bits (92), Expect = 1.2, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 51 EGLECPICWESFNVVENLPYVL-WCGHTLCKNCVLGLQRA 89
E LEC IC +N + +P V+ CGHTLC++C + R
Sbjct: 104 ESLECKICVRQYNDTDRIPRVIPVCGHTLCEDCAKNIIRG 143
>gi|440906826|gb|ELR57047.1| RING finger protein 222 [Bos grunniens mutus]
Length = 209
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Query: 52 GLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNM 111
G ECP+C+E F ++ L CGH C +C++ + + Q+ I CP C
Sbjct: 11 GSECPVCYEKFRELQGASRTLSCGHVFCHDCLVKYLLST----RVDGQVQRTIVCPICRY 66
Query: 112 VSLRLICKGNLKFPQKNYYL 131
+ L + K + + L
Sbjct: 67 ATFFLSSRWPAKLDKSSQIL 86
>gi|403351149|gb|EJY75057.1| hypothetical protein OXYTRI_03562 [Oxytricha trifallax]
Length = 434
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 28/62 (45%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMV 112
L C C + +N P V+ CGH++C C ++ I++ +Q P +C +
Sbjct: 2 LTCKACQKIYNTTTRQPQVMVCGHSICLQCFQEYEQQEIQIQDEKYQCPIKDSCQQTQIS 61
Query: 113 SL 114
+
Sbjct: 62 KI 63
>gi|327289608|ref|XP_003229516.1| PREDICTED: hypothetical protein LOC100552820 [Anolis carolinensis]
Length = 197
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 13/84 (15%)
Query: 35 SSELSDDD-ASLNNS----REEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRA 89
SSE+SD +L +S ++C +C+ S+++ LP L+CGHT C+ C
Sbjct: 39 SSEVSDQSPGTLRSSAVARSSHRVDCIVCFGSYDLSARLPRRLYCGHTFCQAC------- 91
Query: 90 VIRLPTLPFQLPFFITCPWCNMVS 113
+R P ++I CP C +
Sbjct: 92 -LRRLNAPANEQWWIPCPQCRQST 114
>gi|311266225|ref|XP_003131013.1| PREDICTED: E3 ubiquitin-protein ligase TRIM13 isoform 3 [Sus
scrofa]
gi|417516003|gb|JAA53803.1| E3 ubiquitin-protein ligase TRIM13 [Sus scrofa]
Length = 407
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
EE L CPIC F+ P VL C H CK C+ GL +R +L PF CP C
Sbjct: 5 EEDLTCPICCSLFDD----PRVLPCSHNFCKKCLEGLLEGNVR-NSLWRSSPF--KCPTC 57
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMN 139
+ + Q NY L +VE N
Sbjct: 58 R----KETSATGVNSLQVNYSLKGIVEKYN 83
>gi|402896628|ref|XP_003911393.1| PREDICTED: RING finger protein 183 isoform 2 [Papio anubis]
Length = 215
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 21/41 (51%)
Query: 46 NNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
RE ECPICW FN + P +L C H+ C C+ L
Sbjct: 27 QEGRELEAECPICWNPFNNTFHTPKMLDCCHSFCVECLAHL 67
>gi|308459480|ref|XP_003092059.1| hypothetical protein CRE_24266 [Caenorhabditis remanei]
gi|308254391|gb|EFO98343.1| hypothetical protein CRE_24266 [Caenorhabditis remanei]
Length = 1171
Score = 39.7 bits (91), Expect = 1.3, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 51 EGLECPICWESFNVVENLPYVL-WCGHTLCKNCVLGLQRA 89
E LEC IC +N + +P V+ CGHTLC++C + R
Sbjct: 104 ESLECKICVRQYNDTDRIPRVIPVCGHTLCEDCAKNIIRG 143
>gi|90083094|dbj|BAE90629.1| unnamed protein product [Macaca fascicularis]
Length = 407
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
EE L CPIC F+ P VL C H CK C+ G+ +R +L PF CP C
Sbjct: 5 EEDLTCPICCSLFDD----PRVLPCSHNFCKKCLEGILEGSVR-NSLWRPAPF--KCPTC 57
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMN 139
+ + Q NY L +VE N
Sbjct: 58 R----KETSATGINSLQVNYSLKGIVEKYN 83
>gi|403375465|gb|EJY87704.1| hypothetical protein OXYTRI_00251 [Oxytricha trifallax]
Length = 614
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 9/84 (10%)
Query: 53 LECPICWESFNVVENLPYVL-WCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNM 111
++CP C + ++ N+P +L CGHTLC+ C+L + + + I CP C
Sbjct: 1 MQCPQCIQLYHQETNIPRILIGCGHTLCEKCIL----SCFANKSQTNYMKQVIECPECGT 56
Query: 112 VSLRLICKGNLKFPQKNYYLLWMV 135
++ + FP KN LL M
Sbjct: 57 LNEADSVQS---FP-KNLALLNMA 76
>gi|164663151|ref|XP_001732697.1| hypothetical protein MGL_0472 [Malassezia globosa CBS 7966]
gi|159106600|gb|EDP45483.1| hypothetical protein MGL_0472 [Malassezia globosa CBS 7966]
Length = 307
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 7/64 (10%)
Query: 49 REEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPW 108
+EE + CP C + F++V + CGH LC +C L T P ++CP
Sbjct: 217 QEEQMYCPCCKKEFSLVSRTNVLRPCGHVLCASC-------TTTLVTTPLSHGEPVSCPE 269
Query: 109 CNMV 112
C+ V
Sbjct: 270 CSRV 273
>gi|444730209|gb|ELW70599.1| WD repeat-containing protein 31 [Tupaia chinensis]
Length = 595
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 21/41 (51%)
Query: 46 NNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
+E ECP+CW FN + P VL C H+ C C+ L
Sbjct: 407 QQGQEREAECPVCWNPFNNTFHTPKVLDCCHSFCVECLAHL 447
>gi|340383445|ref|XP_003390228.1| PREDICTED: RING finger protein nhl-1-like [Amphimedon
queenslandica]
Length = 351
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 12/76 (15%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
EE L C IC E F P +L C H+ C++C+ GL R V + T ++I+CP C
Sbjct: 14 EEQLTCLICLEHFTN----PKILPCHHSFCEHCLEGLSR-VKKNGT------YYISCPTC 62
Query: 110 NMVSLRLICKGNLKFP 125
S+ L G FP
Sbjct: 63 RR-SIELPKGGAGAFP 77
>gi|145530994|ref|XP_001451269.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124418913|emb|CAK83872.1| unnamed protein product [Paramecium tetraurelia]
Length = 571
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 51 EGLECPICWESFNVVENLPYVL-WCGHTLCKNCV 83
E L CP C FN EN P +L CGHT+C+ C+
Sbjct: 2 EELICPQCHNIFNEFENTPLMLPDCGHTICQKCI 35
>gi|403367056|gb|EJY83338.1| hypothetical protein OXYTRI_19041 [Oxytricha trifallax]
Length = 228
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 25/54 (46%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITC 106
L C C + +N P + CGH++C C ++ I++ +Q P TC
Sbjct: 2 LTCKACKKIYNTTTRQPQFMICGHSICLQCFQKYEQQEIKIQDEKYQCPIKDTC 55
>gi|149059623|gb|EDM10561.1| rCG55211, isoform CRA_a [Rattus norvegicus]
gi|149059624|gb|EDM10562.1| rCG55211, isoform CRA_a [Rattus norvegicus]
Length = 209
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 23/47 (48%)
Query: 40 DDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
D S +E ECP+CW FN + P VL C H+ C C+ L
Sbjct: 17 DQRMSEPQVQELKAECPVCWNPFNNTFHTPKVLDCCHSFCVECLAHL 63
>gi|195496476|ref|XP_002095707.1| GE22558 [Drosophila yakuba]
gi|194181808|gb|EDW95419.1| GE22558 [Drosophila yakuba]
Length = 157
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 19/34 (55%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
L CPIC F + P L CGHT+CK C+ L
Sbjct: 12 LNCPICCNEFAASQRCPVSLGCGHTICKLCLTTL 45
>gi|402896626|ref|XP_003911392.1| PREDICTED: RING finger protein 183 isoform 1 [Papio anubis]
Length = 192
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 21/41 (51%)
Query: 46 NNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
RE ECPICW FN + P +L C H+ C C+ L
Sbjct: 4 QEGRELEAECPICWNPFNNTFHTPKMLDCCHSFCVECLAHL 44
>gi|355567513|gb|EHH23854.1| RING finger protein 183 [Macaca mulatta]
Length = 192
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 21/41 (51%)
Query: 46 NNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
RE ECPICW FN + P +L C H+ C C+ L
Sbjct: 4 QEGRELEAECPICWNPFNNTFHTPKMLDCCHSFCVECLAHL 44
>gi|14009638|gb|AAK51689.1|AF302839_1 putative tumor suppressor LEU5/RFP2 [Mus musculus]
Length = 231
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
EE L CPIC F+ P VL C H CK C+ GL +R +L PF CP C
Sbjct: 5 EEDLTCPICCSLFDD----PRVLPCSHNFCKKCLEGLLEGNVR-NSLWRPSPF--KCPTC 57
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMN 139
+ + Q NY L +VE N
Sbjct: 58 R----KETSATGVNSLQVNYSLKGIVEKYN 83
>gi|149063049|gb|EDM13372.1| tripartite motif protein 50, isoform CRA_a [Rattus norvegicus]
Length = 243
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 14/62 (22%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
++ L+CPIC E F P +L CGH+ CKNC L +L L + CP C
Sbjct: 11 QDQLQCPICLEVFKE----PLMLQCGHSYCKNC----------LDSLSEHLDSELRCPVC 56
Query: 110 NM 111
Sbjct: 57 RQ 58
>gi|109110532|ref|XP_001102310.1| PREDICTED: RING finger protein 183-like isoform 2 [Macaca
mulatta]
Length = 192
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 21/41 (51%)
Query: 46 NNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
RE ECPICW FN + P +L C H+ C C+ L
Sbjct: 4 QEGRELEAECPICWNPFNNTFHTPKMLDCCHSFCVECLAHL 44
>gi|448825574|ref|YP_007418505.1| putative ring finger protein [Megavirus lba]
gi|444236759|gb|AGD92529.1| putative ring finger protein [Megavirus lba]
Length = 80
Score = 39.7 bits (91), Expect = 1.5, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 16/61 (26%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
E ++CPIC+ S N+V++ L CGHT+C +C+L + LP CP C
Sbjct: 29 ETLVDCPICYGSENLVQS---KLICGHTICLDCILNI-------------LPNSKKCPVC 72
Query: 110 N 110
N
Sbjct: 73 N 73
>gi|355753096|gb|EHH57142.1| RING finger protein 183 [Macaca fascicularis]
Length = 192
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 21/41 (51%)
Query: 46 NNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
RE ECPICW FN + P +L C H+ C C+ L
Sbjct: 4 QEGRELEAECPICWNPFNNTFHTPKMLDCCHSFCVECLAHL 44
>gi|122692467|ref|NP_001073772.1| E3 ubiquitin-protein ligase TRIM23 [Bos taurus]
gi|296475857|tpg|DAA17972.1| TPA: tripartite motif-containing 23 [Bos taurus]
Length = 581
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 18/129 (13%)
Query: 53 LECPICWESFNVV-ENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNM 111
LEC +C + F++ + +P +L CGHT+C +C L LP I CP+
Sbjct: 29 LECGVCEDVFSLQGDKVPRLLLCGHTVCHDC----------LTRLPLH-GRAIRCPFDRQ 77
Query: 112 VSLRLICKGNLKFPQKNYYLLWMVESMNGDRSKSNPHFRGDHQPASSLNRNSAVRNQVSH 171
V+ + + +KN+ LL ++E + S G + A ++ S +R
Sbjct: 78 VT--ELGDSGVWGLKKNFALLELLERLQNGHSGQY----GAAEEAIGISGESIIRCDEDE 131
Query: 172 AHNGRATCS 180
AH C+
Sbjct: 132 AHVASVYCT 140
>gi|353236374|emb|CCA68370.1| hypothetical protein PIIN_02236 [Piriformospora indica DSM 11827]
Length = 514
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Query: 55 CPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
C +C + + VV LPY++ CGHT C+NC++ +
Sbjct: 10 CDVCGDQYGVV-CLPYLIPCGHTFCRNCLVSI 40
>gi|308474758|ref|XP_003099599.1| hypothetical protein CRE_22895 [Caenorhabditis remanei]
gi|308266454|gb|EFP10407.1| hypothetical protein CRE_22895 [Caenorhabditis remanei]
Length = 90
Score = 39.7 bits (91), Expect = 1.6, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 12/88 (13%)
Query: 52 GLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNM 111
GLEC +C ++ ++ CGHT+C+ C+ Q+ + L T + CP+C
Sbjct: 14 GLECNVCMLEYSDTVIPRILIGCGHTVCQTCI---QKMLEELKT-------SLMCPFCRK 63
Query: 112 VSLRLICKGNLKFPQKNYYLLWMVESMN 139
S + G KNY +L M+++ N
Sbjct: 64 ES--TVADGRPSNLPKNYAILQMIQNKN 89
>gi|348583553|ref|XP_003477537.1| PREDICTED: E3 ubiquitin-protein ligase TRIM13-like [Cavia
porcellus]
Length = 407
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
EE L CPIC F+ P VL C H CK C+ GL +R +L PF CP C
Sbjct: 5 EEDLTCPICCSLFDD----PRVLPCSHNFCKKCLEGLLEGNVR-NSLWRPAPF--KCPTC 57
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMN 139
+ + Q NY L +VE N
Sbjct: 58 R----KETSATGVNSLQVNYSLKGIVEKYN 83
>gi|308163023|gb|EFO65388.1| Hypothetical protein GLP15_5022 [Giardia lamblia P15]
Length = 376
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQL 100
E LECP C +FN P L CGHT CK C+ ++ ++ L +++
Sbjct: 2 ELLECPACSRTFNA----PITLKCGHTFCKGCLSSKRQKACKICRLRYRV 47
>gi|428183382|gb|EKX52240.1| hypothetical protein GUITHDRAFT_102143 [Guillardia theta CCMP2712]
Length = 336
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 12/62 (19%)
Query: 51 EGLECPICWESFNVVENLPYVLW-CGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
E CPIC+E +N P +L+ CGHT C C+ + I+L + TCP+C
Sbjct: 101 EQATCPICYELMKAPKNTPTLLFPCGHTFCIQCL----NSHIKLNSRG-------TCPYC 149
Query: 110 NM 111
+
Sbjct: 150 RV 151
>gi|413947680|gb|AFW80329.1| hypothetical protein ZEAMMB73_938992 [Zea mays]
Length = 840
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 54 ECPICWESFNVVENLPYVLWCGHTLCKNCV 83
ECP+C F+ +P VL CGH+LC +C+
Sbjct: 14 ECPVCLSPFDAASVVPRVLPCGHSLCGSCI 43
>gi|302814756|ref|XP_002989061.1| hypothetical protein SELMODRAFT_447573 [Selaginella moellendorffii]
gi|300143162|gb|EFJ09855.1| hypothetical protein SELMODRAFT_447573 [Selaginella moellendorffii]
Length = 1258
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 14/70 (20%)
Query: 66 ENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFP 125
E++P VL CGHTLC+ CV+ L R + Q F+ CP C+ V+ L +P
Sbjct: 541 EHVPRVLRCGHTLCQECVVHLARDRQQQ----QQQQRFVRCPECSHVTA-------LAYP 589
Query: 126 Q---KNYYLL 132
KN+ LL
Sbjct: 590 SSLPKNFELL 599
>gi|383135236|gb|AFG48610.1| hypothetical protein 0_11675_01, partial [Pinus taeda]
Length = 117
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 24/33 (72%)
Query: 54 ECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
ECP+CW++F+ +P +L CGHT+C+ C+ L
Sbjct: 5 ECPVCWDTFDRDICMPRLLRCGHTVCQLCLKCL 37
>gi|432920823|ref|XP_004079994.1| PREDICTED: E3 ubiquitin/ISG15 ligase TRIM25-like [Oryzias latipes]
Length = 496
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 41/93 (44%), Gaps = 19/93 (20%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
+E L CP+C + + P++L CGH CKNC+ L+R R + CP C
Sbjct: 13 QEELTCPVCLDLYRD----PHLLPCGHNFCKNCLDRLKRQAER---------GRLRCPEC 59
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMNGDR 142
S R C N QKN+ L + + R
Sbjct: 60 R-DSHR--CSTNF---QKNFKLANIADDYRHQR 86
>gi|393244679|gb|EJD52191.1| hypothetical protein AURDEDRAFT_159046 [Auricularia delicata
TFB-10046 SS5]
Length = 1065
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%), Gaps = 3/32 (9%)
Query: 54 ECPICWESFNVVENLPYVLWCGHTLCKNCVLG 85
ECP C F+V+EN + CGH+ CK+C+LG
Sbjct: 818 ECPFC---FDVMENPVLLPICGHSCCKDCILG 846
>gi|350579806|ref|XP_003480687.1| PREDICTED: RING finger protein 224-like [Sus scrofa]
Length = 192
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 8/60 (13%)
Query: 54 ECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVS 113
+C IC+ ++++ +LP L+CGHT C+ CV L P +I CP C +
Sbjct: 57 DCIICYSAYDLAGHLPRRLYCGHTFCQACVRRLD--------APAHEQRWILCPQCRQST 108
>gi|332021111|gb|EGI61498.1| GTP-binding protein ARD-1 [Acromyrmex echinatior]
Length = 546
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 11/95 (11%)
Query: 53 LECPICWESFNVVE-NLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNM 111
LEC +C E F V +P +L CGHT+C +C+L RL T + F + CP+
Sbjct: 25 LECRVCEEVFTVDGVKVPRLLHCGHTVCHSCLL-------RLRTCMSEQQFLL-CPFDRQ 76
Query: 112 VSLRLICKGNLKFPQKNYYLLWMVESMNGDRSKSN 146
+ I + ++ +KN+ L+ ++E + S+
Sbjct: 77 PT--AIHENSIYSLKKNFALIELLERLEQSNSQKT 109
>gi|449448637|ref|XP_004142072.1| PREDICTED: putative E3 ubiquitin-protein ligase XBAT31-like
[Cucumis sativus]
Length = 443
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 9/71 (12%)
Query: 42 DASLNNSREEGLE---CPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPF 98
DA L+++ EG + C IC+E +E P CGH +C +C L L + P
Sbjct: 305 DAELDDAESEGCDLELCCICFEQACTLEVHP----CGHQMCAHCTLAL--CCYKKPNSST 358
Query: 99 QLPFFITCPWC 109
P CP+C
Sbjct: 359 NCPTTPLCPFC 369
>gi|426342715|ref|XP_004037980.1| PREDICTED: tripartite motif-containing protein 59 isoform 2
[Gorilla gorilla gorilla]
Length = 431
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 22 IRLKNDALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKN 81
IR+K+ + L+ + ++ EE L CPIC+ F P VL C HT C+N
Sbjct: 5 IRIKDSGGVGEECIQPLNHEINKEMHNFEEELTCPICYSIFED----PRVLPCSHTFCRN 60
Query: 82 CVLGLQRAVIRLPT-LPFQLPFFITCPWCNMVS 113
C+ + +A P ++P + CP C ++
Sbjct: 61 CLENILQASGNFYIWRPLRIP--LKCPNCRSIT 91
>gi|126297591|ref|XP_001364607.1| PREDICTED: RING finger protein 183-like [Monodelphis domestica]
Length = 190
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 21/39 (53%)
Query: 48 SREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
+E ECP+CW SFN P +L C H+ C C+ L
Sbjct: 6 GKEPEAECPVCWNSFNNTFRTPKLLDCRHSFCIECLAHL 44
>gi|429860513|gb|ELA35249.1| swi snf family dna-dependent atpase [Colletotrichum gloeosporioides
Nara gc5]
Length = 1161
Score = 39.3 bits (90), Expect = 1.7, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 8/59 (13%)
Query: 29 LKPSQVSSELSDDDASLNNSR----EEGLECPICWESFNVVENLPYVLWCGHTLCKNCV 83
L P+ V L++ +LNN+ +EG ECPIC ++++ + L CGH LC C+
Sbjct: 757 LSPA-VVLRLTEKSRALNNANADAIDEGFECPIC---YDIMPDPTIPLPCGHELCAGCL 811
>gi|452825441|gb|EME32438.1| SNF2 domain-containing protein [Galdieria sulphuraria]
Length = 939
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 16/92 (17%)
Query: 22 IRLKNDALKPSQVSSELSDDDASLNN--SREEGLECPICWESFNVVENLPYVLWCGHTLC 79
I +D SQ S LS L S+ + LECPIC ++V++ CGH C
Sbjct: 643 IFFHSDNANSSQSSEYLSTVVERLKETFSKGDNLECPIC---LDMVDDGVMFCSCGHVTC 699
Query: 80 KNCVLGLQRAVIRLPTLPFQLPFFITCPWCNM 111
K CVL + + R T+P CP C +
Sbjct: 700 KECVLAM---LQRRNTIP--------CPLCRV 720
>gi|297274464|ref|XP_001104514.2| PREDICTED: tripartite motif-containing protein 13-like isoform 1
[Macaca mulatta]
Length = 409
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
EE L CPIC F+ P VL C H CK C+ G+ +R +L PF CP C
Sbjct: 8 EEDLTCPICCSLFDD----PRVLPCSHNFCKKCLEGILEGSVR-NSLWRPAPF--KCPTC 60
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMN 139
+ + Q NY L +VE N
Sbjct: 61 R----KETSATGINSLQVNYSLKGIVEKYN 86
>gi|402902048|ref|XP_003913941.1| PREDICTED: E3 ubiquitin-protein ligase TRIM13 isoform 3 [Papio
anubis]
Length = 409
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
EE L CPIC F+ P VL C H CK C+ G+ +R +L PF CP C
Sbjct: 8 EEDLTCPICCSLFDD----PRVLPCSHNFCKKCLEGILEGSVR-NSLWRPAPF--KCPTC 60
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMN 139
+ + Q NY L +VE N
Sbjct: 61 R----KETSATGINSLQVNYSLKGIVEKYN 86
>gi|341890321|gb|EGT46256.1| hypothetical protein CAEBREN_10356 [Caenorhabditis brenneri]
Length = 742
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 11/101 (10%)
Query: 53 LECPICWESFNVVE--NLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
L CPIC+ ++ ++ P L CGHTLC+ C+ L ++ F+ CP C
Sbjct: 266 LSCPICYIEYSEIQASQTPRNLACGHTLCEGCLPKLIEKT-KMDMCCFR------CPVCG 318
Query: 111 MVSLRLICKGNLKFPQKNYYLLWMVESMNGDRSKSNPHFRG 151
M + L KN+ L+ ++ + G+R N F+G
Sbjct: 319 MQVQMMRPDHPLAGVPKNHALIDILREIEGER--ENERFQG 357
>gi|118100004|ref|XP_415709.2| PREDICTED: E3 ubiquitin-protein ligase TRIM50 [Gallus gallus]
Length = 492
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
E+ L CPIC E F P +L CGH+ CK+CVL L
Sbjct: 11 EDQLLCPICLEVFKE----PLMLQCGHSYCKSCVLSL 43
>gi|403266161|ref|XP_003925264.1| PREDICTED: RING finger protein 183 isoform 1 [Saimiri boliviensis
boliviensis]
gi|403266163|ref|XP_003925265.1| PREDICTED: RING finger protein 183 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 192
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 21/41 (51%)
Query: 46 NNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
RE ECP+CW FN + P +L C H+ C C+ L
Sbjct: 4 QQGRELEAECPVCWNPFNNTFHTPKMLDCCHSFCVECLAHL 44
>gi|403369353|gb|EJY84522.1| hypothetical protein OXYTRI_17632 [Oxytricha trifallax]
Length = 1065
Score = 39.3 bits (90), Expect = 1.8, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 32 SQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQ 87
S+ + +L+ D S ++S+ E EC +C+ +F+ + P ++ C HT C C+ L+
Sbjct: 18 SRSNQDLAQDSNSQDSSQNE--ECEVCFNTFDEGIHYPMIINCSHTFCDACIKELK 71
>gi|402902044|ref|XP_003913939.1| PREDICTED: E3 ubiquitin-protein ligase TRIM13 isoform 1 [Papio
anubis]
gi|402902046|ref|XP_003913940.1| PREDICTED: E3 ubiquitin-protein ligase TRIM13 isoform 2 [Papio
anubis]
Length = 406
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
EE L CPIC F+ P VL C H CK C+ G+ +R +L PF CP C
Sbjct: 5 EEDLTCPICCSLFDD----PRVLPCSHNFCKKCLEGILEGSVR-NSLWRPAPF--KCPTC 57
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMN 139
+ + Q NY L +VE N
Sbjct: 58 R----KETSATGINSLQVNYSLKGIVEKYN 83
>gi|345322328|ref|XP_001508385.2| PREDICTED: E3 ubiquitin-protein ligase NHLRC1-like [Ornithorhynchus
anatinus]
Length = 439
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 41/96 (42%), Gaps = 18/96 (18%)
Query: 20 GAIRLKNDALKPSQVSSELSDD----DASLNNSREEGLECPICWESFNV-VENLPYVLWC 74
GA R D P+ +++E SDD L + LEC +C+E E P L C
Sbjct: 32 GAGRGPPD---PAAMAAEPSDDVRPAPGPLGEIQVRLLECQVCFEKHGARKERRPRNLPC 88
Query: 75 GHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
GH +C CV+ L P L F CP+C
Sbjct: 89 GHVVCLECVVALAH--------PETLTFL--CPFCR 114
>gi|390334481|ref|XP_003723939.1| PREDICTED: uncharacterized protein LOC100888865
[Strongylocentrotus purpuratus]
Length = 716
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 4/35 (11%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLG 85
+GL CP+C ++F P +L CGHT CK C+ G
Sbjct: 11 QGLACPLCLDTFKN----PTLLLCGHTFCKVCLEG 41
>gi|50761533|ref|XP_424752.1| PREDICTED: E3 ubiquitin-protein ligase TRIM23 [Gallus gallus]
Length = 578
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 18/129 (13%)
Query: 53 LECPICWESFNVV-ENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNM 111
LEC +C + F++ + +P +L CGHT+C +C L LP + CP+
Sbjct: 33 LECGVCEDVFSLQGDKVPRLLLCGHTVCHDC----------LTRLPLH-GRAVRCPFDRQ 81
Query: 112 VSLRLICKGNLKFPQKNYYLLWMVESMNGDRSKSNPHFRGDHQPASSLNRNSAVRNQVSH 171
V+ + + +KN+ LL ++E + P G + A L+ S +R
Sbjct: 82 VT--ELGDSGVWGLKKNFALLELLERLQ----NGPPGQCGTAEEAIGLSGESIIRCDEDE 135
Query: 172 AHNGRATCS 180
AH C+
Sbjct: 136 AHVASVYCT 144
>gi|354489168|ref|XP_003506736.1| PREDICTED: E3 ubiquitin-protein ligase TRIM13 [Cricetulus griseus]
gi|344248762|gb|EGW04866.1| Tripartite motif-containing protein 13 [Cricetulus griseus]
Length = 407
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
EE L CPIC F+ P VL C H CK C+ GL +R +L PF CP C
Sbjct: 5 EEDLTCPICCSLFDD----PRVLPCSHNFCKKCLEGLLEGNVR-NSLWRPSPF--KCPTC 57
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMN 139
+ + Q NY L +VE N
Sbjct: 58 R----KETSATGVNSLQVNYSLKGIVEKYN 83
>gi|426375500|ref|XP_004054572.1| PREDICTED: E3 ubiquitin-protein ligase TRIM13 isoform 2 [Gorilla
gorilla gorilla]
Length = 410
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
EE L CPIC F+ P VL C H CK C+ G+ +R +L PF CP C
Sbjct: 8 EEDLTCPICCSLFDD----PRVLPCSHNFCKKCLEGILEGSVR-NSLWRPAPF--KCPTC 60
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMN 139
+ + Q NY L +VE N
Sbjct: 61 R----KETSATGINSLQVNYSLKGIVEKYN 86
>gi|410905499|ref|XP_003966229.1| PREDICTED: E3 ubiquitin-protein ligase NHLRC1-like [Takifugu
rubripes]
Length = 431
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 53 LECPICWESFNVVE--NLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPF 98
LEC +C+E F+ + + P L CGH LC C+ L V++ PF
Sbjct: 26 LECKVCFEKFSTGQSGHRPQNLSCGHVLCLKCITSLSHPVLKRLECPF 73
>gi|308467331|ref|XP_003095914.1| hypothetical protein CRE_07743 [Caenorhabditis remanei]
gi|308244285|gb|EFO88237.1| hypothetical protein CRE_07743 [Caenorhabditis remanei]
Length = 205
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 19/91 (20%)
Query: 30 KPSQVSSELSDDDASLNNSREEGL------ECPICWESFNVVE-NLPYVLWCGHTLCKNC 82
K +V+ +L + L ++ + G+ +C C+E F +P VL CGHTLC C
Sbjct: 107 KEQEVTRQLERRNKELKDALDNGISIKPWKQCGRCFEEFGEKGVRVPKVLECGHTLCVGC 166
Query: 83 VLGLQRAVIRLPTLPFQLPFFITCPWCNMVS 113
+ + + P+ I CP+ +V+
Sbjct: 167 LKQIAQ------------PYSIECPFDGLVT 185
>gi|153252110|ref|NP_659488.2| RING finger protein 183 [Homo sapiens]
gi|119607771|gb|EAW87365.1| ring finger protein 183, isoform CRA_b [Homo sapiens]
gi|119607772|gb|EAW87366.1| ring finger protein 183, isoform CRA_b [Homo sapiens]
Length = 192
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 21/41 (51%)
Query: 46 NNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
RE ECP+CW FN + P +L C H+ C C+ L
Sbjct: 4 QQGRELEAECPVCWNPFNNTFHTPKMLDCCHSFCVECLAHL 44
>gi|55953112|ref|NP_001007279.1| E3 ubiquitin-protein ligase TRIM13 isoform 2 [Homo sapiens]
gi|55418572|gb|AAV51406.1| candidate tumor suppressor RFP2 [Homo sapiens]
gi|119629249|gb|EAX08844.1| ret finger protein 2, isoform CRA_a [Homo sapiens]
Length = 410
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
EE L CPIC F+ P VL C H CK C+ G+ +R +L PF CP C
Sbjct: 8 EEDLTCPICCSLFDD----PRVLPCSHNFCKKCLEGILEGSVR-NSLWRPAPF--KCPTC 60
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMN 139
+ + Q NY L +VE N
Sbjct: 61 R----KETSATGINSLQVNYSLKGIVEKYN 86
>gi|410896730|ref|XP_003961852.1| PREDICTED: tripartite motif-containing 13-like [Takifugu rubripes]
Length = 394
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 29/60 (48%), Gaps = 9/60 (15%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
EE L CPIC F P VL C H+ CK C+ GL R T F+ PF CP C
Sbjct: 5 EEELTCPICCGLFED----PRVLLCSHSFCKKCLEGLLEGS-RGST--FRTPF--KCPTC 55
>gi|195590801|ref|XP_002085133.1| GD12476 [Drosophila simulans]
gi|194197142|gb|EDX10718.1| GD12476 [Drosophila simulans]
Length = 651
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 19/34 (55%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
L CPIC F + P L CGHT+CK C+ L
Sbjct: 12 LNCPICCNEFAASQRCPVSLGCGHTICKLCLTTL 45
>gi|14149754|ref|NP_075722.1| E3 ubiquitin-protein ligase TRIM13 [Mus musculus]
gi|255982501|ref|NP_001157692.1| E3 ubiquitin-protein ligase TRIM13 [Mus musculus]
gi|47117305|sp|Q9CYB0.1|TRI13_MOUSE RecName: Full=E3 ubiquitin-protein ligase TRIM13; AltName:
Full=Putative tumor suppressor RFP2; AltName: Full=Ret
finger protein 2; AltName: Full=Tripartite
motif-containing protein 13
gi|12857315|dbj|BAB30973.1| unnamed protein product [Mus musculus]
gi|148704148|gb|EDL36095.1| mCG4281, isoform CRA_a [Mus musculus]
gi|148704149|gb|EDL36096.1| mCG4281, isoform CRA_a [Mus musculus]
gi|148877994|gb|AAI45916.1| Tripartite motif-containing 13 [Mus musculus]
gi|187952937|gb|AAI38577.1| Tripartite motif-containing 13 [Mus musculus]
Length = 407
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
EE L CPIC F+ P VL C H CK C+ GL +R +L PF CP C
Sbjct: 5 EEDLTCPICCSLFDD----PRVLPCSHNFCKKCLEGLLEGNVR-NSLWRPSPF--KCPTC 57
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMN 139
+ + Q NY L +VE N
Sbjct: 58 R----KETSATGVNSLQVNYSLKGIVEKYN 83
>gi|296190618|ref|XP_002743260.1| PREDICTED: RING finger protein 183 [Callithrix jacchus]
Length = 192
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 21/41 (51%)
Query: 46 NNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
RE ECP+CW FN + P +L C H+ C C+ L
Sbjct: 4 QQGRELEAECPVCWNPFNNTFHTPKMLDCCHSFCVECLAHL 44
>gi|260835097|ref|XP_002612546.1| hypothetical protein BRAFLDRAFT_75331 [Branchiostoma floridae]
gi|229297923|gb|EEN68555.1| hypothetical protein BRAFLDRAFT_75331 [Branchiostoma floridae]
Length = 343
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
EEGL C IC E+F ++LP CGHT C+ C+ L
Sbjct: 9 EEGLWCEICHETFRRPKSLP----CGHTFCEECLTEL 41
>gi|74760778|sp|Q96D59.1|RN183_HUMAN RecName: Full=RING finger protein 183
gi|15991882|gb|AAH13036.1| Ring finger protein 183 [Homo sapiens]
gi|123984052|gb|ABM83500.1| ring finger protein 183 [synthetic construct]
gi|123998229|gb|ABM86716.1| ring finger protein 183 [synthetic construct]
Length = 192
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 21/41 (51%)
Query: 46 NNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
RE ECP+CW FN + P +L C H+ C C+ L
Sbjct: 4 QQGRELEAECPVCWNPFNNTFHTPKMLDCCHSFCVECLAHL 44
>gi|449502558|ref|XP_004161676.1| PREDICTED: putative E3 ubiquitin-protein ligase XBAT31-like
[Cucumis sativus]
Length = 443
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 9/71 (12%)
Query: 42 DASLNNSREEGLE---CPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPF 98
DA L+++ EG + C IC+E +E P CGH +C +C L L + P
Sbjct: 305 DAELDDAESEGCDLELCCICFEQACTLEVHP----CGHQMCAHCTLAL--CCYKKPNSST 358
Query: 99 QLPFFITCPWC 109
P CP+C
Sbjct: 359 NCPTTPLCPFC 369
>gi|119607957|gb|EAW87551.1| membrane associated DNA binding protein, isoform CRA_d [Homo
sapiens]
Length = 218
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CPIC+ F+ + P L C HT+CK C+ L R
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHR 47
>gi|297274466|ref|XP_002800812.1| PREDICTED: tripartite motif-containing protein 13-like isoform 2
[Macaca mulatta]
gi|297274468|ref|XP_002800813.1| PREDICTED: tripartite motif-containing protein 13-like isoform 3
[Macaca mulatta]
gi|297274470|ref|XP_002800814.1| PREDICTED: tripartite motif-containing protein 13-like isoform 4
[Macaca mulatta]
gi|355754705|gb|EHH58606.1| E3 ubiquitin-protein ligase TRIM13 [Macaca fascicularis]
Length = 406
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
EE L CPIC F+ P VL C H CK C+ G+ +R +L PF CP C
Sbjct: 5 EEDLTCPICCSLFDD----PRVLPCSHNFCKKCLEGILEGSVR-NSLWRPAPF--KCPTC 57
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMN 139
+ + Q NY L +VE N
Sbjct: 58 R----KETSATGINSLQVNYSLKGIVEKYN 83
>gi|332241957|ref|XP_003270151.1| PREDICTED: E3 ubiquitin-protein ligase TRIM13 isoform 3 [Nomascus
leucogenys]
Length = 410
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
EE L CPIC F+ P VL C H CK C+ G+ +R +L PF CP C
Sbjct: 8 EEDLTCPICCSLFDD----PRVLPCSHNFCKKCLEGILEGSVR-NSLWRPAPF--KCPTC 60
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMN 139
+ + Q NY L +VE N
Sbjct: 61 R----KETSATGINSLQVNYSLKGIVEKYN 86
>gi|296484985|tpg|DAA27100.1| TPA: putative E3 ubiquitin-protein ligase SH3RF1 [Bos taurus]
Length = 709
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 48/120 (40%), Gaps = 29/120 (24%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL--QRAVIRLPTLPFQLPFFITCPWCN 110
LECP+C E + VL C HT CK C+LG+ R +R CP C
Sbjct: 10 LECPVCLERLDASAK---VLPCQHTFCKRCLLGIVGSRNELR-------------CPECR 53
Query: 111 MVSLRLICKGNLKFPQKNYYLLWMVESMNGDRSKSNPHFRGDHQPASSLNRNSAVRNQVS 170
L+ G + P N L+ +++ + K P S N SA+R Q S
Sbjct: 54 T----LVGSGVEQLP-SNILLVRLLDGIKQRPWKPGPVG------GSGTNGTSALRAQSS 102
>gi|291408973|ref|XP_002720780.1| PREDICTED: ret finger protein 2 [Oryctolagus cuniculus]
Length = 407
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
EE L CPIC F+ P VL C H CK C+ GL +R +L PF CP C
Sbjct: 5 EEDLTCPICCSLFDD----PRVLPCSHNFCKKCLEGLLEGNVR-NSLWRPSPF--KCPTC 57
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMN 139
+ + Q NY L +VE N
Sbjct: 58 R----KETSATGVNSLQVNYSLKGIVEKYN 83
>gi|24665272|ref|NP_648886.1| roquin, isoform A [Drosophila melanogaster]
gi|442632801|ref|NP_001261940.1| roquin, isoform C [Drosophila melanogaster]
gi|442632803|ref|NP_001261941.1| roquin, isoform B [Drosophila melanogaster]
gi|7294120|gb|AAF49474.1| roquin, isoform A [Drosophila melanogaster]
gi|61675677|gb|AAX51654.1| LD12033p [Drosophila melanogaster]
gi|220950406|gb|ACL87746.1| roq-PA [synthetic construct]
gi|440215887|gb|AGB94633.1| roquin, isoform C [Drosophila melanogaster]
gi|440215888|gb|AGB94634.1| roquin, isoform B [Drosophila melanogaster]
Length = 819
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 19/34 (55%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
L CPIC F + P L CGHT+CK C+ L
Sbjct: 12 LNCPICCNEFAASQRCPVSLGCGHTICKLCLTTL 45
>gi|16445412|ref|NP_434698.1| E3 ubiquitin-protein ligase TRIM13 isoform 1 [Homo sapiens]
gi|47132521|ref|NP_005789.2| E3 ubiquitin-protein ligase TRIM13 isoform 1 [Homo sapiens]
gi|47132524|ref|NP_998755.1| E3 ubiquitin-protein ligase TRIM13 isoform 1 [Homo sapiens]
gi|71153168|sp|O60858.2|TRI13_HUMAN RecName: Full=E3 ubiquitin-protein ligase TRIM13; AltName:
Full=B-cell chronic lymphocytic leukemia tumor
suppressor Leu5; AltName: Full=Leukemia-associated
protein 5; AltName: Full=Putative tumor suppressor RFP2;
AltName: Full=RING finger protein 77; AltName: Full=Ret
finger protein 2; AltName: Full=Tripartite
motif-containing protein 13
gi|13097765|gb|AAH03579.1| Tripartite motif-containing 13 [Homo sapiens]
gi|13124899|gb|AAK13059.1| CAR [Homo sapiens]
gi|28395473|gb|AAO38979.1| ret finger protein 2 transcript variant 1 [Homo sapiens]
gi|39777541|gb|AAR31110.1| leu5 [Homo sapiens]
gi|39795405|gb|AAH63407.1| Tripartite motif-containing 13 [Homo sapiens]
gi|119629250|gb|EAX08845.1| ret finger protein 2, isoform CRA_b [Homo sapiens]
gi|119629251|gb|EAX08846.1| ret finger protein 2, isoform CRA_b [Homo sapiens]
gi|119629252|gb|EAX08847.1| ret finger protein 2, isoform CRA_b [Homo sapiens]
gi|119629253|gb|EAX08848.1| ret finger protein 2, isoform CRA_b [Homo sapiens]
gi|123983986|gb|ABM83496.1| ret finger protein 2 [synthetic construct]
gi|123998219|gb|ABM86711.1| ret finger protein 2 [synthetic construct]
gi|189069430|dbj|BAG37096.1| unnamed protein product [Homo sapiens]
gi|261861912|dbj|BAI47478.1| tripartite motif-containing protein 13 [synthetic construct]
Length = 407
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
EE L CPIC F+ P VL C H CK C+ G+ +R +L PF CP C
Sbjct: 5 EEDLTCPICCSLFDD----PRVLPCSHNFCKKCLEGILEGSVR-NSLWRPAPF--KCPTC 57
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMN 139
+ + Q NY L +VE N
Sbjct: 58 R----KETSATGINSLQVNYSLKGIVEKYN 83
>gi|341890340|gb|EGT46275.1| hypothetical protein CAEBREN_09415 [Caenorhabditis brenneri]
Length = 259
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 14/87 (16%)
Query: 55 CPICWESF--NVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMV 112
C IC + N + + CGH++C+ C L L + FITCP+C V
Sbjct: 172 CKICSAPYTENGIHTPRIIKECGHSVCEQCADNL---------LKLKTENFITCPFCQKV 222
Query: 113 SLRLICKGNLKFPQKNYYLLWMVESMN 139
+ I G+ + KN+ LL +ES+
Sbjct: 223 T---IVHGSAETLPKNFALLEQIESVQ 246
>gi|426375498|ref|XP_004054571.1| PREDICTED: E3 ubiquitin-protein ligase TRIM13 isoform 1 [Gorilla
gorilla gorilla]
Length = 407
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
EE L CPIC F+ P VL C H CK C+ G+ +R +L PF CP C
Sbjct: 5 EEDLTCPICCSLFDD----PRVLPCSHNFCKKCLEGILEGSVR-NSLWRPAPF--KCPTC 57
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMN 139
+ + Q NY L +VE N
Sbjct: 58 R----KETSATGINSLQVNYSLKGIVEKYN 83
>gi|392597808|gb|EIW87130.1| hypothetical protein CONPUDRAFT_45428 [Coniophora puteana
RWD-64-598 SS2]
Length = 1136
Score = 39.3 bits (90), Expect = 1.9, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 4/46 (8%)
Query: 39 SDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVL 84
+D A+L N+ EEG ECPIC +++E+ + C H CK+C+L
Sbjct: 855 ADVLANLKNAEEEG-ECPIC---LDIMESPTIIPSCMHRCCKDCIL 896
>gi|156397370|ref|XP_001637864.1| predicted protein [Nematostella vectensis]
gi|156224980|gb|EDO45801.1| predicted protein [Nematostella vectensis]
Length = 270
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 14/108 (12%)
Query: 41 DDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQL 100
D ++ ++ +ECPIC E F P VL C HT C C++GL P
Sbjct: 2 DKTNIEERLQKEVECPICLERFKD----PRVLPCLHTFCYECLVGLASRYKTEGKWP--- 54
Query: 101 PFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVESMNGDRSKSNPH 148
CP C MV + + + N+ + ++ + D + PH
Sbjct: 55 -----CPQCKMVV--QVSPAEVSSLKVNFLMNTLLSVVTNDSKSAKPH 95
>gi|449445035|ref|XP_004140279.1| PREDICTED: E3 ubiquitin-protein ligase KEG-like [Cucumis sativus]
Length = 1621
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 11/81 (13%)
Query: 55 CPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSL 114
C IC F+ P +L CGHT CK+C+ + I PT P +TCP C VS
Sbjct: 13 CSICRIHFDEDSRSPLLLQCGHTFCKHCL-----SQIIAPTSPKP---SLTCPKCRHVS- 63
Query: 115 RLICKGNLKFPQKNYYLLWMV 135
I L P KN+ +L M+
Sbjct: 64 -TIGNSVLSLP-KNFAILPMI 82
>gi|390366897|ref|XP_003731136.1| PREDICTED: tripartite motif containing 13-like, partial
[Strongylocentrotus purpuratus]
Length = 187
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 15/69 (21%)
Query: 44 SLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFF 103
++N + L CPIC+E + + P L C HT C C+ + +
Sbjct: 8 EMDNDLDNTLSCPICYEHYGI----PKALPCLHTFCSRCLQQIADGYMT----------- 52
Query: 104 ITCPWCNMV 112
ITCP C+ V
Sbjct: 53 ITCPICSTV 61
>gi|348521086|ref|XP_003448057.1| PREDICTED: E3 ubiquitin/ISG15 ligase TRIM25-like [Oreochromis
niloticus]
Length = 647
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 50/132 (37%), Gaps = 26/132 (19%)
Query: 48 SREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCP 107
S E+ L C IC +F+ P + CGH C++C+L + +CP
Sbjct: 13 SLEDELTCSICLSTFDC----PVTIPCGHNFCQDCLLATWKES-------------YSCP 55
Query: 108 WCNMVSLRLICKGNLKFPQKNYYLLWMVESMNGDRSKSNPHFRGDHQPASSLNRNSAVRN 167
C + + LK KN L +VE+ SKS P+ + S + + +R
Sbjct: 56 QCRTL---FATRPELK---KNTVLTAVVETFKVRSSKSEPNLAAEE---SQVKKKEIIRC 106
Query: 168 QVSHAHNGRATC 179
TC
Sbjct: 107 DTCMEAEASKTC 118
>gi|9651927|gb|AAF91315.1|AF241850_1 ret finger protein 2 [Homo sapiens]
gi|12407423|gb|AAG53500.1|AF220127_1 tripartite motif protein TRIM13 alpha [Homo sapiens]
gi|3133092|emb|CAA12136.1| tumor suppressor [Homo sapiens]
gi|14009479|gb|AAK51624.1| putative tumor suppressor RFP2 [Homo sapiens]
gi|91680937|gb|ABE41638.1| putative tumor suppressor RFP2 [Homo sapiens]
Length = 407
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
EE L CPIC F+ P VL C H CK C+ G+ +R +L PF CP C
Sbjct: 5 EEDLTCPICCSLFDD----PRVLPCSHNFCKKCLEGILEGSVR-NSLWRPAPF--KCPTC 57
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMN 139
+ + Q NY L +VE N
Sbjct: 58 R----KETSATGINSLQVNYSLKGIVEKYN 83
>gi|83776027|dbj|BAE66146.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 966
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 16/91 (17%)
Query: 46 NNSREEG--LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFF 103
+N RE G ECPIC++S V+N CGH++C C + P +P P
Sbjct: 614 DNERENGREFECPICYDS---VDNHVIFFPCGHSVCVKCFARI------FPQVPTARPRV 664
Query: 104 -----ITCPWCNMVSLRLICKGNLKFPQKNY 129
+ CP C +V + F +++Y
Sbjct: 665 EGNPPMCCPSCRVVIDPSKATDHTAFAKQHY 695
>gi|393223238|gb|EJD32218.1| hypothetical protein AURDEDRAFT_178747 [Auricularia delicata
TFB-10046 SS5]
Length = 232
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 54 ECPICWESFNVVENLPYVLW-CGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNM 111
ECP+C E++++ PY+L CGH++C+ C++ R F CP C++
Sbjct: 88 ECPVCKETYSI----PYLLVDCGHSMCQTCIINFFRQRRTNSITGLFCNAFEQCPLCSV 142
>gi|341884610|gb|EGT40545.1| hypothetical protein CAEBREN_00307 [Caenorhabditis brenneri]
Length = 173
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 31/128 (24%)
Query: 1 MQTPIGNYFPS-----SLPVTAISGAIRLKNDALKPSQVSSEL---------SDDDASLN 46
++T + PS +L VT + +R K + + ++E +DDA +
Sbjct: 30 LETAVATNAPSMWGNPNLEVTRLESLLRQKREENERLTATNERQNVVLQWHRENDDARI- 88
Query: 47 NSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIR-----LPTLPFQLP 101
+CP+C + ++ V ++P ++ CGH++C C L R V + PT
Sbjct: 89 ----ASRQCPVCLDDYSDV-HVPTIIHCGHSVCITCARQLCRRVPQQHQRERPT------ 137
Query: 102 FFITCPWC 109
+ ITCP C
Sbjct: 138 YIITCPVC 145
>gi|296189250|ref|XP_002742703.1| PREDICTED: E3 ubiquitin-protein ligase TRIM13 isoform 2 [Callithrix
jacchus]
Length = 407
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
EE L CPIC F+ P VL C H CK C+ G+ +R +L PF CP C
Sbjct: 5 EEDLTCPICCSLFDD----PRVLPCSHNFCKKCLEGILEGSVR-NSLWRPAPF--KCPTC 57
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMN 139
+ + Q NY L +VE N
Sbjct: 58 R----KETSATGINSLQVNYSLKGIVEKYN 83
>gi|449481166|ref|XP_004156101.1| PREDICTED: E3 ubiquitin-protein ligase KEG-like [Cucumis sativus]
Length = 1638
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 11/81 (13%)
Query: 55 CPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSL 114
C IC F+ P +L CGHT CK+C+ + I PT P +TCP C VS
Sbjct: 13 CSICRIHFDEDSRSPLLLQCGHTFCKHCL-----SQIIAPTSPKP---SLTCPKCRHVS- 63
Query: 115 RLICKGNLKFPQKNYYLLWMV 135
I L P KN+ +L M+
Sbjct: 64 -TIGNSVLSLP-KNFAILPMI 82
>gi|397574031|gb|EJK48991.1| hypothetical protein THAOC_32170 [Thalassiosira oceanica]
Length = 884
Score = 39.3 bits (90), Expect = 2.0, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 35 SSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCV-LGLQRAVIRL 93
++ + AS+ ++ L CPIC + F+ P L CGHT C+ C+ L+R +RL
Sbjct: 303 AAAFGERGASVAAHLKQDLSCPICHDRFHE----PVSLLCGHTFCRKCLSWWLERQGVRL 358
>gi|336378819|gb|EGO19976.1| hypothetical protein SERLADRAFT_401388 [Serpula lacrymans var.
lacrymans S7.9]
Length = 131
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 55 CPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQL 100
C +C E ++ +N P+ + CGH+ C+ C+ L R L F+L
Sbjct: 10 CDVCLEGYSNGQNTPHAIVCGHSFCQGCLESLTRLTCPLCRTRFEL 55
>gi|195328119|ref|XP_002030764.1| GM24408 [Drosophila sechellia]
gi|194119707|gb|EDW41750.1| GM24408 [Drosophila sechellia]
Length = 792
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 19/34 (55%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
L CPIC F + P L CGHT+CK C+ L
Sbjct: 12 LNCPICCNEFAASQRCPVSLGCGHTICKLCLTTL 45
>gi|426254717|ref|XP_004021023.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
TRIM50 [Ovis aries]
Length = 456
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 7/48 (14%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR---AVIRLP 94
E+ L+CP+C E F P +L CGH+ CK C++ + R A +R P
Sbjct: 11 EDRLQCPMCLEVFKE----PLMLQCGHSYCKGCLVSVSRHLAAELRCP 54
>gi|395506163|ref|XP_003757405.1| PREDICTED: RING finger protein 183 [Sarcophilus harrisii]
Length = 190
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
E ECP+CW SFN P +L C H+ C C+ L
Sbjct: 8 EPEAECPVCWNSFNNTFRTPKLLDCRHSFCIECLAHL 44
>gi|341893922|gb|EGT49857.1| hypothetical protein CAEBREN_17632 [Caenorhabditis brenneri]
Length = 207
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 45/107 (42%), Gaps = 27/107 (25%)
Query: 35 SSELSDDDASLNNSREEGLECPICWESFNVVENLPYVL-WCGHTLCKNCVLGLQRAVIRL 93
+EL A++ + E CP CWE P V CGHT C++C+ A R
Sbjct: 121 EAELGRQIAAIREAFVEVGRCPACWEHMEA----PQVTAGCGHTFCQDCM-----AKCRA 171
Query: 94 PTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVESMNG 140
LP CP +C+G ++ P +N+ L ++ + G
Sbjct: 172 EELP--------CP---------VCRGVVRRPVRNFGLADLLGRLAG 201
>gi|55632153|ref|XP_520199.1| PREDICTED: RING finger protein 183 isoform 4 [Pan troglodytes]
gi|114626232|ref|XP_001151188.1| PREDICTED: RING finger protein 183 isoform 2 [Pan troglodytes]
gi|397526371|ref|XP_003833101.1| PREDICTED: RING finger protein 183 isoform 1 [Pan paniscus]
gi|397526373|ref|XP_003833102.1| PREDICTED: RING finger protein 183 isoform 2 [Pan paniscus]
Length = 192
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 21/41 (51%)
Query: 46 NNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
RE ECP+CW FN + P +L C H+ C C+ L
Sbjct: 4 QQGRELEAECPVCWNPFNNTFHTPKMLDCCHSFCVECLAHL 44
>gi|58865996|ref|NP_001012210.1| tripartite motif-containing 13 [Rattus norvegicus]
gi|81889127|sp|Q5M7V1.1|TRI13_RAT RecName: Full=Tripartite motif-containing 13; AltName:
Full=Putative tumor suppressor RFP2; AltName: Full=Ret
finger protein 2; AltName: Full=Tripartite
motif-containing protein 13
gi|56789535|gb|AAH88425.1| Tripartite motif-containing 13 [Rattus norvegicus]
gi|149030225|gb|EDL85281.1| rCG52074 [Rattus norvegicus]
Length = 407
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
EE L CPIC F+ P VL C H CK C+ GL +R +L PF CP C
Sbjct: 5 EEDLTCPICCSLFDD----PRVLPCSHNFCKKCLEGLLEGNVR-NSLWRPSPF--KCPTC 57
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMN 139
+ + Q NY L +VE N
Sbjct: 58 R----KETSATGVNSLQVNYSLKGIVEKYN 83
>gi|403303336|ref|XP_003942289.1| PREDICTED: E3 ubiquitin-protein ligase TRIM13 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403303338|ref|XP_003942290.1| PREDICTED: E3 ubiquitin-protein ligase TRIM13 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 407
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
EE L CPIC F+ P VL C H CK C+ G+ +R +L PF CP C
Sbjct: 5 EEDLTCPICCSLFDD----PRVLPCSHNFCKKCLEGILEGSVR-NSLWRPAPF--KCPTC 57
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMN 139
+ + Q NY L +VE N
Sbjct: 58 R----KETSATGINSLQVNYSLKGIVEKYN 83
>gi|395824036|ref|XP_003785278.1| PREDICTED: RING finger protein 183 [Otolemur garnettii]
Length = 191
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 21/41 (51%)
Query: 46 NNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
R+ ECP+CW FN + P VL C H+ C C+ L
Sbjct: 4 QQGRQLEAECPVCWNPFNNTFHTPKVLDCCHSFCVECLAHL 44
>gi|344281820|ref|XP_003412675.1| PREDICTED: E3 ubiquitin-protein ligase TRIM13-like [Loxodonta
africana]
Length = 408
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
EE L CPIC F+ P VL C H CK C+ GL +R +L PF CP C
Sbjct: 5 EEDLTCPICCSLFDD----PRVLPCSHNFCKKCLEGLLEGNVR-NSLWRPSPF--KCPTC 57
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMN 139
+ + Q NY L +VE N
Sbjct: 58 R----KETSATGVNSLQVNYSLKGIVEKYN 83
>gi|195477611|ref|XP_002086368.1| GE22905 [Drosophila yakuba]
gi|194186158|gb|EDW99769.1| GE22905 [Drosophila yakuba]
Length = 822
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 19/34 (55%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
L CPIC F + P L CGHT+CK C+ L
Sbjct: 12 LNCPICCNEFAASQRCPVSLGCGHTICKLCLTTL 45
>gi|332241953|ref|XP_003270149.1| PREDICTED: E3 ubiquitin-protein ligase TRIM13 isoform 1 [Nomascus
leucogenys]
gi|332241955|ref|XP_003270150.1| PREDICTED: E3 ubiquitin-protein ligase TRIM13 isoform 2 [Nomascus
leucogenys]
gi|441613918|ref|XP_004088181.1| PREDICTED: E3 ubiquitin-protein ligase TRIM13 [Nomascus leucogenys]
Length = 407
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
EE L CPIC F+ P VL C H CK C+ G+ +R +L PF CP C
Sbjct: 5 EEDLTCPICCSLFDD----PRVLPCSHNFCKKCLEGILEGSVR-NSLWRPAPF--KCPTC 57
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMN 139
+ + Q NY L +VE N
Sbjct: 58 R----KETSATGINSLQVNYSLKGIVEKYN 83
>gi|194873676|ref|XP_001973257.1| GG13458 [Drosophila erecta]
gi|190655040|gb|EDV52283.1| GG13458 [Drosophila erecta]
Length = 827
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 19/34 (55%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
L CPIC F + P L CGHT+CK C+ L
Sbjct: 12 LNCPICCNEFAASQRCPVSLGCGHTICKLCLTTL 45
>gi|21357313|ref|NP_649596.1| degringolade, isoform A [Drosophila melanogaster]
gi|7296664|gb|AAF51944.1| degringolade, isoform A [Drosophila melanogaster]
gi|16768306|gb|AAL28372.1| GM01182p [Drosophila melanogaster]
gi|220950342|gb|ACL87714.1| CG10981-PA [synthetic construct]
Length = 319
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 49 REEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLP 94
+EE +CPIC +S + E P CGH C+ C+ RA + P
Sbjct: 260 KEELYKCPICMDSVSKRE--PVSTKCGHVFCRECIETAIRATHKCP 303
>gi|426362745|ref|XP_004048515.1| PREDICTED: RING finger protein 183 isoform 1 [Gorilla gorilla
gorilla]
gi|426362747|ref|XP_004048516.1| PREDICTED: RING finger protein 183 isoform 2 [Gorilla gorilla
gorilla]
Length = 192
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 21/41 (51%)
Query: 46 NNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
RE ECP+CW FN + P +L C H+ C C+ L
Sbjct: 4 QQGRELEAECPVCWNPFNNTFHTPKMLNCCHSFCVECLAHL 44
>gi|403351383|gb|EJY75181.1| hypothetical protein OXYTRI_03435 [Oxytricha trifallax]
Length = 855
Score = 38.9 bits (89), Expect = 2.2, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 11/65 (16%)
Query: 29 LKPSQVSSELSDD-----------DASLNNSREEGLECPICWESFNVVENLPYVLWCGHT 77
+ PSQ S LSD+ +NN+ ++ CP+C +N +N +L CG +
Sbjct: 9 INPSQPLSILSDNYQTQQPGIEYNQNDINNNSQQQRTCPLCENPYNNAKNHFLILQCGDS 68
Query: 78 LCKNC 82
LC C
Sbjct: 69 LCLQC 73
>gi|390335961|ref|XP_780349.3| PREDICTED: uncharacterized protein LOC574854 [Strongylocentrotus
purpuratus]
Length = 1520
Score = 38.9 bits (89), Expect = 2.2, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
E L CP+C + F+ P L CGHT C+ C+ L R
Sbjct: 10 EVLSCPVCCKDFSPSGRQPVSLSCGHTACRMCLSKLHR 47
>gi|260835105|ref|XP_002612550.1| hypothetical protein BRAFLDRAFT_120965 [Branchiostoma floridae]
gi|229297927|gb|EEN68559.1| hypothetical protein BRAFLDRAFT_120965 [Branchiostoma floridae]
Length = 389
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
EEGL C IC E+F ++LP CGHT C+ C+ L
Sbjct: 55 EEGLWCEICHETFRRPKSLP----CGHTFCEECLTEL 87
>gi|194748759|ref|XP_001956812.1| GF24386 [Drosophila ananassae]
gi|190624094|gb|EDV39618.1| GF24386 [Drosophila ananassae]
Length = 848
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 19/34 (55%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
L CPIC F + P L CGHT+CK C+ L
Sbjct: 12 LNCPICCNEFAASQRCPVSLGCGHTICKLCLTTL 45
>gi|440898472|gb|ELR49967.1| E3 ubiquitin-protein ligase TRIM13, partial [Bos grunniens mutus]
Length = 410
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
EE L CPIC F+ P VL C H CK C+ G+ +R +L PF CP C
Sbjct: 8 EEDLTCPICCSLFDD----PRVLPCSHNFCKKCLEGILEGNVR-NSLWRSSPF--KCPTC 60
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMN 139
+ + Q NY L +VE N
Sbjct: 61 R----KETSATGVNSLQVNYSLKGIVEKYN 86
>gi|397476963|ref|XP_003809858.1| PREDICTED: E3 ubiquitin-protein ligase TRIM13 isoform 3 [Pan
paniscus]
Length = 410
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
EE L CPIC F+ P VL C H CK C+ G+ +R +L PF CP C
Sbjct: 8 EEDLTCPICCSLFDD----PRVLPCSHNFCKKCLEGILEGSVR-NSLWRPAPF--KCPTC 60
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMN 139
+ + Q NY L +VE N
Sbjct: 61 R----KETSATGINSLQVNYSLKGIVEKYN 86
>gi|351703188|gb|EHB06107.1| Tripartite motif-containing protein 13 [Heterocephalus glaber]
Length = 405
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
EE L CPIC F+ P VL C H CK C+ GL +R +L PF CP C
Sbjct: 5 EEDLTCPICCSLFDD----PRVLPCSHNFCKKCLEGLLEGNVR-NSLWRPSPF--KCPTC 57
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMN 139
+ + Q NY L +VE N
Sbjct: 58 R----KETSATGVNSLQVNYSLKGIVEKYN 83
>gi|154415885|ref|XP_001580966.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121915189|gb|EAY19980.1| hypothetical protein TVAG_402350 [Trichomonas vaginalis G3]
Length = 231
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Query: 55 CPICWESFNVVENLPYVLW-CGHTLCKNC 82
CPIC E ++ E +P L+ CGHT+CK+C
Sbjct: 55 CPICCEIMDLPERMPITLFPCGHTICKSC 83
>gi|9629493|ref|NP_044724.1| hypothetical protein DaV1gp27 [Duck adenovirus A]
gi|56158908|ref|AP_000104.1| ORF7 [Duck adenovirus A]
gi|2145348|emb|CAA70794.1| hypothetical protein [Duck adenovirus 1]
Length = 346
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Query: 38 LSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRA 89
++ SL E L CP+C + F V P L CGHT CK+C+ G+ ++
Sbjct: 1 MAARSVSLAEQVTEKLLCPVCLDLFRV----PITLMCGHTCCKHCLNGIVKS 48
>gi|14581675|gb|AAK56791.1| putative transcription factor ret finger protein 2 [Mus musculus]
Length = 407
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
EE L CPIC F+ P VL C H CK C+ GL +R +L PF CP C
Sbjct: 5 EEDLTCPICCSLFDD----PRVLPCSHNFCKKCLEGLLEGNVR-NSLWRPSPF--KCPTC 57
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMN 139
+ + Q NY L +VE N
Sbjct: 58 R----KETSATGVNSLQVNYSLKGIVEKYN 83
>gi|327290122|ref|XP_003229773.1| PREDICTED: RING finger protein 183-like [Anolis carolinensis]
Length = 184
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 8/57 (14%)
Query: 54 ECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
ECPICW F+ P +L C HT C C+ L +L P + CP C
Sbjct: 12 ECPICWSPFDNAFRTPKLLRCRHTFCIECLAHL--------SLVASDPHCLQCPLCR 60
>gi|66826523|ref|XP_646616.1| hypothetical protein DDB_G0270206 [Dictyostelium discoideum AX4]
gi|60474516|gb|EAL72453.1| hypothetical protein DDB_G0270206 [Dictyostelium discoideum AX4]
Length = 1154
Score = 38.9 bits (89), Expect = 2.2, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 21/86 (24%)
Query: 24 LKNDALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCV 83
+K++ K + S++ ++N ++ + CPIC+E + +VL CGH CKNCV
Sbjct: 1079 IKSEKEKLKRFESQIKTTKNEIDNIDQDKI-CPICFE-----DEKDHVLNCGHRFCKNCV 1132
Query: 84 LGLQRAVIRLPTLPFQLPFFITCPWC 109
+ + I+CP C
Sbjct: 1133 VDNK---------------LISCPLC 1143
>gi|350536839|ref|NP_001233446.1| tripartite motif-containing protein 13 [Pan troglodytes]
gi|397476959|ref|XP_003809856.1| PREDICTED: E3 ubiquitin-protein ligase TRIM13 isoform 1 [Pan
paniscus]
gi|397476961|ref|XP_003809857.1| PREDICTED: E3 ubiquitin-protein ligase TRIM13 isoform 2 [Pan
paniscus]
gi|343960036|dbj|BAK63872.1| ret finger protein 2 [Pan troglodytes]
Length = 407
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
EE L CPIC F+ P VL C H CK C+ G+ +R +L PF CP C
Sbjct: 5 EEDLTCPICCSLFDD----PRVLPCSHNFCKKCLEGILEGSVR-NSLWRPAPF--KCPTC 57
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMN 139
+ + Q NY L +VE N
Sbjct: 58 R----KETSATGINSLQVNYSLKGIVEKYN 83
>gi|242056063|ref|XP_002457177.1| hypothetical protein SORBIDRAFT_03g002770 [Sorghum bicolor]
gi|241929152|gb|EES02297.1| hypothetical protein SORBIDRAFT_03g002770 [Sorghum bicolor]
Length = 823
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 47 NSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCV 83
++ E ECP+C F+ +P VL CGH+LC C+
Sbjct: 9 DAEAETPECPVCLSPFDAASVVPRVLPCGHSLCGPCI 45
>gi|47226889|emb|CAG05781.1| unnamed protein product [Tetraodon nigroviridis]
Length = 328
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 29/61 (47%), Gaps = 9/61 (14%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
EE L CPIC F P VL C H+ CK C+ GL R P F+ PF CP C
Sbjct: 5 EEELTCPICCGLFED----PRVLLCSHSFCKKCLEGLLEGG-RGPA--FRAPF--KCPTC 55
Query: 110 N 110
Sbjct: 56 R 56
>gi|328867826|gb|EGG16207.1| hypothetical protein DFA_09237 [Dictyostelium fasciculatum]
Length = 636
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
Query: 58 CWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPF 98
CWE F + NLP L+CGH+ CK C L++A++ PF
Sbjct: 18 CWECFELY-NLPVTLFCGHSFCKGC---LEKALLVEQKCPF 54
>gi|426342713|ref|XP_004037979.1| PREDICTED: tripartite motif-containing protein 59 isoform 1
[Gorilla gorilla gorilla]
gi|426342717|ref|XP_004037981.1| PREDICTED: tripartite motif-containing protein 59 isoform 3
[Gorilla gorilla gorilla]
gi|426342719|ref|XP_004037982.1| PREDICTED: tripartite motif-containing protein 59 isoform 4
[Gorilla gorilla gorilla]
gi|426342721|ref|XP_004037983.1| PREDICTED: tripartite motif-containing protein 59 isoform 5
[Gorilla gorilla gorilla]
gi|426342723|ref|XP_004037984.1| PREDICTED: tripartite motif-containing protein 59 isoform 6
[Gorilla gorilla gorilla]
gi|426342725|ref|XP_004037985.1| PREDICTED: tripartite motif-containing protein 59 isoform 7
[Gorilla gorilla gorilla]
Length = 403
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTL-PFQLPFFITCPW 108
EE L CPIC+ F P VL C HT C+NC+ + +A P ++P + CP
Sbjct: 5 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENILQASGNFYIWRPLRIP--LKCPN 58
Query: 109 CNMVS 113
C ++
Sbjct: 59 CRSIT 63
>gi|260833090|ref|XP_002611490.1| hypothetical protein BRAFLDRAFT_63875 [Branchiostoma floridae]
gi|229296861|gb|EEN67500.1| hypothetical protein BRAFLDRAFT_63875 [Branchiostoma floridae]
Length = 899
Score = 38.9 bits (89), Expect = 2.3, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 15/61 (24%)
Query: 49 REEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPW 108
+EE L C IC+E + P VL C HT CK C L++ V ++ L TCP
Sbjct: 10 KEEFLVCQICFEDYRE----PKVLPCQHTFCKEC---LEKMVAKMGKL--------TCPN 54
Query: 109 C 109
C
Sbjct: 55 C 55
>gi|260836373|ref|XP_002613180.1| hypothetical protein BRAFLDRAFT_73101 [Branchiostoma floridae]
gi|229298565|gb|EEN69189.1| hypothetical protein BRAFLDRAFT_73101 [Branchiostoma floridae]
Length = 612
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 43/99 (43%), Gaps = 17/99 (17%)
Query: 49 REEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPW 108
REE L C IC ++F P VL C HT C C+ A R PFQ CP
Sbjct: 16 REEFLSCSICTDTF----KKPKVLPCQHTFCSTCLRDW--AETR---KPFQ------CPM 60
Query: 109 CNMVSLRLICKGNLKFPQKNYYLLWMVESMNGDRSKSNP 147
C VS+ L +G F Q N + + E + S S P
Sbjct: 61 CR-VSVDLPAQGVSGF-QDNRLVAGLCEQFSDKLSTSPP 97
>gi|126322237|ref|XP_001376254.1| PREDICTED: e3 ubiquitin-protein ligase NHLRC1-like [Monodelphis
domestica]
Length = 405
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 15/85 (17%)
Query: 34 VSSELSDDDASLNNSREEG----LECPICWESFNVVENL-PYVLWCGHTLCKNCVLGLQR 88
+S+E S+ + +L E LEC +C+E ++ ++ P L CGH +C+ CV L +
Sbjct: 1 MSAEASEREPALRALMREAEVSLLECKVCFEKYSHEKDRRPRNLACGHVICQGCVTALTQ 60
Query: 89 AVIRLPTLPFQLPFFITCPWCNMVS 113
R + CP+C S
Sbjct: 61 PRTRT----------LECPFCRKAS 75
>gi|403349782|gb|EJY74333.1| Kelch motif family protein [Oxytricha trifallax]
Length = 599
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR-AVIRLP 94
E EC +C++++N E P L CGHT C C+ + + ++I+ P
Sbjct: 2 ESIFECGVCFKTYNHSEKKPLSLPCGHTFCLECLKQINKHSIIKCP 47
>gi|55249660|gb|AAH85684.1| Tripartite motif-containing 50 [Rattus norvegicus]
Length = 484
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 14/62 (22%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
++ L+CPIC E F P +L CGH+ CKNC L +L L + CP C
Sbjct: 11 QDQLQCPICLEVFKE----PLMLQCGHSYCKNC----------LDSLSEHLDSELRCPVC 56
Query: 110 NM 111
Sbjct: 57 RQ 58
>gi|27436877|ref|NP_775107.1| tripartite motif-containing protein 59 [Homo sapiens]
gi|74714421|sp|Q8IWR1.1|TRI59_HUMAN RecName: Full=Tripartite motif-containing protein 59; AltName:
Full=RING finger protein 104; AltName: Full=Tumor
suppressor TSBF-1
gi|27358012|gb|AAN86853.1| tumor suppressor TSBF1 [Homo sapiens]
gi|80475903|gb|AAI09260.1| Tripartite motif-containing 59 [Homo sapiens]
gi|80478299|gb|AAI09261.1| Tripartite motif-containing 59 [Homo sapiens]
gi|119599041|gb|EAW78635.1| tripartite motif-containing 59, isoform CRA_a [Homo sapiens]
gi|119599042|gb|EAW78636.1| tripartite motif-containing 59, isoform CRA_a [Homo sapiens]
gi|119599043|gb|EAW78637.1| tripartite motif-containing 59, isoform CRA_a [Homo sapiens]
gi|119599044|gb|EAW78638.1| tripartite motif-containing 59, isoform CRA_a [Homo sapiens]
gi|158256004|dbj|BAF83973.1| unnamed protein product [Homo sapiens]
Length = 403
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTL-PFQLPFFITCPW 108
EE L CPIC+ F P VL C HT C+NC+ + +A P ++P + CP
Sbjct: 5 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENILQASGNFYIWRPLRIP--LKCPN 58
Query: 109 CNMVS 113
C ++
Sbjct: 59 CRSIT 63
>gi|12407425|gb|AAG53501.1|AF220128_1 tripartite motif protein TRIM13 beta [Homo sapiens]
Length = 175
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
EE L CPIC F+ P VL C H CK C+ G+ +R +L PF CP C
Sbjct: 5 EEDLTCPICCSLFDD----PRVLPCSHNFCKKCLEGILEGSVR-NSLWRPAPF--KCPTC 57
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMN 139
+ + Q NY L +VE N
Sbjct: 58 R----KETSATGINSLQVNYSLKGIVEKYN 83
>gi|30842804|ref|NP_851594.1| E3 ubiquitin-protein ligase TRIM50 [Rattus norvegicus]
gi|56404685|sp|Q810I1.1|TRI50_RAT RecName: Full=E3 ubiquitin-protein ligase TRIM50; AltName:
Full=Tripartite motif-containing protein 50
gi|29465652|gb|AAL91073.1| tripartite motif protein 50 [Rattus norvegicus]
gi|149063050|gb|EDM13373.1| tripartite motif protein 50, isoform CRA_b [Rattus norvegicus]
Length = 483
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 14/62 (22%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
++ L+CPIC E F P +L CGH+ CKNC L +L L + CP C
Sbjct: 11 QDQLQCPICLEVFKE----PLMLQCGHSYCKNC----------LDSLSEHLDSELRCPVC 56
Query: 110 NM 111
Sbjct: 57 RQ 58
>gi|308467295|ref|XP_003095896.1| hypothetical protein CRE_07747 [Caenorhabditis remanei]
gi|308244267|gb|EFO88219.1| hypothetical protein CRE_07747 [Caenorhabditis remanei]
Length = 348
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 14/82 (17%)
Query: 54 ECPICWESFNV-VENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMV 112
+C +C++ F + V+ +P +L C HT+C C+ L + P +I CP+ V
Sbjct: 280 DCQLCFQEFAINVDMVPRLLQCEHTICSACLRKLMK------------PTYIKCPFDGTV 327
Query: 113 SLRLICKGNLKFPQKNYYLLWM 134
K FP KNY L M
Sbjct: 328 WCSCSTKTIDDFP-KNYKALAM 348
>gi|426236351|ref|XP_004012133.1| PREDICTED: E3 ubiquitin-protein ligase TRIM13 [Ovis aries]
Length = 407
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
EE L CPIC F+ P VL C H CK C+ G+ +R +L PF CP C
Sbjct: 5 EEDLTCPICCSLFDD----PRVLPCSHNFCKKCLEGILEGNVR-NSLWRSSPF--KCPTC 57
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMN 139
+ + Q NY L +VE N
Sbjct: 58 R----KETSATGVNSLQVNYSLKGIVEKYN 83
>gi|24644441|ref|NP_731017.1| degringolade, isoform B [Drosophila melanogaster]
gi|23175939|gb|AAN14328.1| degringolade, isoform B [Drosophila melanogaster]
gi|25012446|gb|AAN71329.1| RE22765p [Drosophila melanogaster]
Length = 312
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 49 REEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLP 94
+EE +CPIC +S + E P CGH C+ C+ RA + P
Sbjct: 253 KEELYKCPICMDSVSKRE--PVSTKCGHVFCRECIETAIRATHKCP 296
>gi|390361659|ref|XP_003729977.1| PREDICTED: tripartite motif-containing protein 59-like
[Strongylocentrotus purpuratus]
Length = 333
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 16/61 (26%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPF--FITCPW 108
+ L CP+C E+F P +L CGHT CK+C L T + F ++ CP
Sbjct: 10 DSLACPLCLEAFKS----PTLLQCGHTFCKDC----------LETYDEKHTFWDYMDCPL 55
Query: 109 C 109
C
Sbjct: 56 C 56
>gi|20386036|gb|AAM21558.1|AF446007_1 MEK1 interacting protein 1 [Dictyostelium discoideum]
Length = 577
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 19/84 (22%)
Query: 28 ALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYV-LWCGHTLCKNCVLGL 86
++ S + D ++ + + + LECPIC+E + PYV CGH C +C++
Sbjct: 485 EMEKENESKKAIDTQSNGGDKKSKNLECPICFE-----DTKPYVSTLCGHIFCSDCIVNA 539
Query: 87 QRAVIRLPTLPFQLPFFITCPWCN 110
L +CP CN
Sbjct: 540 -------------LKKKKSCPVCN 550
>gi|426238822|ref|XP_004013343.1| PREDICTED: uncharacterized protein LOC101120178 [Ovis aries]
Length = 289
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 50/117 (42%), Gaps = 13/117 (11%)
Query: 2 QTPIGNYFPSSLPVTAISGAIRLKNDALKPSQVSSELSDDDASLNNSREEGLECPICWES 61
Q P G P P ++ GA L +DAL+ + +L SL E L+C IC+
Sbjct: 76 QRPRGG--PQHGPARSVHGAG-LVSDALESAAGKMQLLVRIPSLPERGE--LDCNICYRP 130
Query: 62 FNVVENLPYVL------WCGHTLCKNCVLGLQRAVIRLPTLP--FQLPFFITCPWCN 110
FN+ + P L CGHTLC C+ L +L +TCP+C
Sbjct: 131 FNLGDRAPRRLPGTARTRCGHTLCTACLRELAARGDGGGAAARVVRLRRLVTCPFCR 187
>gi|405957742|gb|EKC23929.1| Midline-2 [Crassostrea gigas]
Length = 630
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 8/55 (14%)
Query: 55 CPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
CPIC+ESF P +L C HT C NC+ + + P P CP C
Sbjct: 19 CPICFESFKT----PRILPCLHTFCHNCLSSYILSTCKSKESPVGFP----CPLC 65
>gi|397521162|ref|XP_003830670.1| PREDICTED: LOW QUALITY PROTEIN: tripartite motif-containing protein
59 [Pan paniscus]
Length = 402
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTL-PFQLPFFITCPW 108
EE L CPIC+ F P VL C HT C+NC+ + +A P ++P + CP
Sbjct: 5 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENILQASGNFYIWRPLRIP--LKCPN 58
Query: 109 CNMVS 113
C ++
Sbjct: 59 CRSIT 63
>gi|332818244|ref|XP_003310122.1| PREDICTED: LOW QUALITY PROTEIN: tripartite motif-containing protein
59 [Pan troglodytes]
Length = 402
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTL-PFQLPFFITCPW 108
EE L CPIC+ F P VL C HT C+NC+ + +A P ++P + CP
Sbjct: 5 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENILQASGNFYIWRPLRIP--LKCPN 58
Query: 109 CNMVS 113
C ++
Sbjct: 59 CRSIT 63
>gi|341892155|gb|EGT48090.1| hypothetical protein CAEBREN_09013 [Caenorhabditis brenneri]
Length = 226
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 54 ECPICWESF--NVVENLPYVLWCGHTLCKNCVLGLQRAVIRL 93
ECPIC E+F ++ P +L CGHT+C C+ + RL
Sbjct: 161 ECPICTETFTLHLQATRPRILHCGHTVCHTCIQSMLEGTHRL 202
>gi|253741507|gb|EES98376.1| Hypothetical protein GL50581_4458 [Giardia intestinalis ATCC 50581]
Length = 373
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQL 100
E LECP C +FN P L CGHT CK C+ ++ ++ L +++
Sbjct: 2 ELLECPACNRTFNA----PITLKCGHTFCKGCLSSKRQKACKICRLRYRV 47
>gi|384955450|sp|Q32L60.2|TRI13_BOVIN RecName: Full=E3 ubiquitin-protein ligase TRIM13; AltName:
Full=Putative tumor suppressor RFP2; AltName: Full=Ret
finger protein 2; AltName: Full=Tripartite
motif-containing protein 13
gi|296481833|tpg|DAA23948.1| TPA: ret finger protein 2 [Bos taurus]
Length = 407
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
EE L CPIC F+ P VL C H CK C+ G+ +R +L PF CP C
Sbjct: 5 EEDLTCPICCSLFDD----PRVLPCSHNFCKKCLEGILEGNVR-NSLWRSSPF--KCPTC 57
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMN 139
+ + Q NY L +VE N
Sbjct: 58 R----KETSATGVNSLQVNYSLKGIVEKYN 83
>gi|452824676|gb|EME31677.1| zinc finger (C3HC4-type RING finger) family protein isoform 2
[Galdieria sulphuraria]
gi|452824677|gb|EME31678.1| zinc finger (C3HC4-type RING finger) family protein isoform 1
[Galdieria sulphuraria]
Length = 358
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 7/64 (10%)
Query: 38 LSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLP 97
L++ DA +E C ICWE F V + L C H CKNC+ + PT
Sbjct: 290 LTEQDA------KEAESCAICWEEFQV-NTVVVFLPCSHLFCKNCICTWLKENSTCPTCR 342
Query: 98 FQLP 101
++LP
Sbjct: 343 YKLP 346
>gi|405969111|gb|EKC34117.1| hypothetical protein CGI_10014955 [Crassostrea gigas]
Length = 1363
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 6/57 (10%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
+ CPIC F+ + +P +L C HT+C C+ + + + P I CP C
Sbjct: 864 ISCPICAYQFSTPDKVPKLLPCYHTICSPCIDSI------IASTPLNSDSTIKCPIC 914
>gi|440908669|gb|ELR58664.1| Putative E3 ubiquitin-protein ligase SH3RF1 [Bos grunniens mutus]
Length = 795
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 48/120 (40%), Gaps = 29/120 (24%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL--QRAVIRLPTLPFQLPFFITCPWCN 110
LECP+C E + VL C HT CK C+LG+ R +R CP C
Sbjct: 10 LECPVCLERLDASAK---VLPCQHTFCKRCLLGIVGSRNELR-------------CPECR 53
Query: 111 MVSLRLICKGNLKFPQKNYYLLWMVESMNGDRSKSNPHFRGDHQPASSLNRNSAVRNQVS 170
L+ G + P N L+ +++ + K P S N SA+R Q S
Sbjct: 54 T----LVGSGVEQLP-SNILLVRLLDGIKQRPWKPGPVG------GSGTNGTSALRAQSS 102
>gi|345316072|ref|XP_001518842.2| PREDICTED: E3 ubiquitin-protein ligase TRIM21-like [Ornithorhynchus
anatinus]
Length = 273
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 33/71 (46%), Gaps = 13/71 (18%)
Query: 45 LNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFI 104
+ S E + CPIC + FN P L CGHT C +C++ R V R F
Sbjct: 1 MAQSFHEEVTCPICLDYFN----YPISLGCGHTFCSHCII---RWVGRTEQSCF------ 47
Query: 105 TCPWCNMVSLR 115
+CP C +S R
Sbjct: 48 SCPECRRISHR 58
>gi|341895794|gb|EGT51729.1| hypothetical protein CAEBREN_15514 [Caenorhabditis brenneri]
Length = 143
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 16/93 (17%)
Query: 55 CPICWESF--NVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMV 112
C IC F N+ + P +L CGHT C C L++ + F+TCP+C
Sbjct: 62 CKICLLGFSENLKKRAPLMLSCGHTFCWKCCKELKKQNSNM---------FVTCPFCRKE 112
Query: 113 SLRLICKGNLKFPQKNYYLLWMVESMNGDRSKS 145
+ G LK KNY ++ M+ + + K
Sbjct: 113 TF-----GLLKELPKNYAIIEMIPTRTTENGKK 140
>gi|66822495|ref|XP_644602.1| MEK1 interacting protein 1 [Dictyostelium discoideum AX4]
gi|66822589|ref|XP_644649.1| MEK1 interacting protein 1 [Dictyostelium discoideum AX4]
gi|60472704|gb|EAL70654.1| MEK1 interacting protein 1 [Dictyostelium discoideum AX4]
gi|60472772|gb|EAL70722.1| MEK1 interacting protein 1 [Dictyostelium discoideum AX4]
Length = 552
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 19/84 (22%)
Query: 28 ALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYV-LWCGHTLCKNCVLGL 86
++ S + D ++ + + + LECPIC+E + PYV CGH C +C++
Sbjct: 473 EMEKENESKKAIDTQSNGGDKKSKNLECPICFE-----DTKPYVSTLCGHIFCSDCIVNA 527
Query: 87 QRAVIRLPTLPFQLPFFITCPWCN 110
L +CP CN
Sbjct: 528 -------------LKKKKSCPVCN 538
>gi|70943223|ref|XP_741684.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56520218|emb|CAH77849.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 227
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Query: 55 CPICWESFNVVENLPYVLWCGHTLCKNCV 83
CPI + + +N+PY+L CGH +CKNCV
Sbjct: 169 CPISRDK-SSKDNMPYLLTCGHAICKNCV 196
>gi|341899094|gb|EGT55029.1| hypothetical protein CAEBREN_04152 [Caenorhabditis brenneri]
Length = 357
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 57/127 (44%), Gaps = 28/127 (22%)
Query: 13 LPVTAISGAIRLKNDALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVL 72
+P T I+G R+ +++ + VSS + D C IC ++ + ++
Sbjct: 258 VPRTVIAG--RISPESVIITAVSSSNASD-------------CNICLLQYSNLVVPRILI 302
Query: 73 WCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYLL 132
CGHT C+ C+ L R + R ++CP C ++L L C P KNY ++
Sbjct: 303 GCGHTFCEKCIRKLPRTLAR-----------VSCPLCRNITL-LPCGRTDALP-KNYTVM 349
Query: 133 WMVESMN 139
M++ N
Sbjct: 350 DMIQERN 356
>gi|118089811|ref|XP_420402.2| PREDICTED: E3 ubiquitin-protein ligase SH3RF1 [Gallus gallus]
Length = 872
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL--QRAVIRLP 94
LECP+C E + VL C HT CK C+LG+ R +R P
Sbjct: 10 LECPVCLERLDASAK---VLPCQHTFCKRCLLGIVSSRNELRCP 50
>gi|348527598|ref|XP_003451306.1| PREDICTED: RING finger protein 183-like [Oreochromis niloticus]
Length = 320
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 8/63 (12%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
E EC +C+ +++ V P +L CGHT C C+ + L TL +CP C
Sbjct: 105 EDTECAVCFCTYDNVFKTPKLLACGHTFCLECLARINVTSPELKTL--------SCPVCR 156
Query: 111 MVS 113
V+
Sbjct: 157 EVT 159
>gi|410984568|ref|XP_003998600.1| PREDICTED: E3 ubiquitin-protein ligase TRIM50 [Felis catus]
Length = 487
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
E+ L+CPIC E F P +L CGH+ CK C++ L
Sbjct: 11 EDRLQCPICLEVFKE----PMMLQCGHSYCKGCLVNL 43
>gi|317159396|ref|XP_001827279.2| hypothetical protein AOR_1_1414024 [Aspergillus oryzae RIB40]
Length = 1090
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 16/91 (17%)
Query: 46 NNSREEG--LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFF 103
+N RE G ECPIC++S V+N CGH++C C + P +P P
Sbjct: 701 DNERENGREFECPICYDS---VDNHVIFFPCGHSVCVKCFARI------FPQVPTARPRV 751
Query: 104 -----ITCPWCNMVSLRLICKGNLKFPQKNY 129
+ CP C +V + F +++Y
Sbjct: 752 EGNPPMCCPSCRVVIDPSKATDHTAFAKQHY 782
>gi|119590093|gb|EAW69687.1| hCG1642804, isoform CRA_a [Homo sapiens]
gi|119590096|gb|EAW69690.1| hCG1642804, isoform CRA_a [Homo sapiens]
Length = 250
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 23/94 (24%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
E+ L+CPIC E F P +L CGH+ CK C++ +L L + CP C
Sbjct: 11 EDRLQCPICLEVFKE----PLMLQCGHSYCKGCLV----------SLSCHLDAELRCPVC 56
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMN--GD 141
R G+ P N L ++E++ GD
Sbjct: 57 -----RQAVDGSSSLP--NVSLARVIEALRLPGD 83
>gi|197100502|ref|NP_001125394.1| tripartite motif-containing protein 13 [Pongo abelii]
gi|55727917|emb|CAH90711.1| hypothetical protein [Pongo abelii]
Length = 407
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
EE L CPIC F+ P VL C H CK C+ G+ +R +L PF CP C
Sbjct: 5 EEDLTCPICCSLFDD----PRVLPCSHNFCKKCLEGILEGNVR-NSLWRPAPF--KCPTC 57
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMN 139
+ + Q NY L +VE N
Sbjct: 58 R----KETSATGINSLQVNYSLKGIVEKYN 83
>gi|348551648|ref|XP_003461642.1| PREDICTED: E3 ubiquitin-protein ligase TRIM23 [Cavia porcellus]
Length = 574
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 57/131 (43%), Gaps = 22/131 (16%)
Query: 53 LECPICWESFNVV-ENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNM 111
LEC +C + F++ + +P +L CGHT+C +C L LP I CP+
Sbjct: 29 LECGVCEDVFSLQGDKIPRLLLCGHTVCHDC----------LTRLPLH-GRAIRCPFDRQ 77
Query: 112 VSLRLICKGNLKFPQKNYYLLWMVESMNGDRSKSNPHFR--GDHQPASSLNRNSAVRNQV 169
V+ + + +KN+ LL ++E + N H G + A ++ S +R
Sbjct: 78 VT--DLGDSGVWGLKKNFALLELLERLQ------NGHIGQYGAAEEAIGVSGESIIRCDE 129
Query: 170 SHAHNGRATCS 180
AH C+
Sbjct: 130 DEAHVASVYCT 140
>gi|268572891|ref|XP_002649071.1| Hypothetical protein CBG22559 [Caenorhabditis briggsae]
Length = 595
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 6/57 (10%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
+ C +C+E FN P +L CGH C++C+ L + L +I CP C
Sbjct: 20 ITCEVCFEPFNHQTRPPKLLPCGHNFCESCIFSL------CLHQEYYLLDYIKCPTC 70
>gi|348556129|ref|XP_003463875.1| PREDICTED: RING finger protein 183-like [Cavia porcellus]
Length = 199
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 21/40 (52%)
Query: 47 NSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
RE ECP+CW FN + P +L C H+ C C+ L
Sbjct: 5 QGRELEAECPVCWNPFNNTFHTPKLLDCCHSFCVECLAHL 44
>gi|326918317|ref|XP_003205436.1| PREDICTED: putative E3 ubiquitin-protein ligase SH3RF1-like
[Meleagris gallopavo]
Length = 870
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL--QRAVIRLP 94
LECP+C E + VL C HT CK C+LG+ R +R P
Sbjct: 10 LECPVCLERLDASAK---VLPCQHTFCKRCLLGIVSSRNELRCP 50
>gi|308460583|ref|XP_003092594.1| hypothetical protein CRE_19492 [Caenorhabditis remanei]
gi|308252995|gb|EFO96947.1| hypothetical protein CRE_19492 [Caenorhabditis remanei]
Length = 384
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 34 VSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVL-WCGHTLCKNCVLGLQRAVIR 92
V +E ++ + N++ G EC IC ++ +P +L CGHT+C+ C+ L R I+
Sbjct: 291 VPTEQEQNETTGNST--SGTECNICMLRYSTTTVIPRMLVGCGHTVCQECIQKLPRQDIQ 348
Query: 93 LPTLPF 98
PF
Sbjct: 349 SVLCPF 354
>gi|260816139|ref|XP_002602829.1| hypothetical protein BRAFLDRAFT_236493 [Branchiostoma floridae]
gi|229288142|gb|EEN58841.1| hypothetical protein BRAFLDRAFT_236493 [Branchiostoma floridae]
Length = 192
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPT 95
+ C IC + F LP +L CGHT C+ C++ R +R PT
Sbjct: 1 MSCGICLQPFK----LPKILPCGHTFCEECLVEAARGGLRCPT 39
>gi|409047073|gb|EKM56552.1| hypothetical protein PHACADRAFT_207772 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1296
Score = 38.9 bits (89), Expect = 2.7, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 11/67 (16%)
Query: 33 QVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVL----GLQR 88
++++E + DA+L + ECP+C++ + P + CGH+ C++C+ G QR
Sbjct: 898 RMAAEKASADATLEG---DDFECPVCFDGYTD----PIITACGHSFCRDCITNVLNGAQR 950
Query: 89 AVIRLPT 95
PT
Sbjct: 951 EDAAEPT 957
>gi|308484767|ref|XP_003104583.1| hypothetical protein CRE_23331 [Caenorhabditis remanei]
gi|308257783|gb|EFP01736.1| hypothetical protein CRE_23331 [Caenorhabditis remanei]
Length = 396
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 10/57 (17%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
+ECPIC+ V + P + CGHT+C C+ R V R+ T P I CP C
Sbjct: 19 VECPICY----TVYDKPMQMGCGHTICSTCI---GRLVERVKT---SGPTEIKCPEC 65
>gi|195145605|ref|XP_002013782.1| GL24328 [Drosophila persimilis]
gi|194102725|gb|EDW24768.1| GL24328 [Drosophila persimilis]
Length = 317
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 16/75 (21%)
Query: 46 NNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFIT 105
N S EG +CP+C + E P CGH C+ C+ RA +
Sbjct: 255 NQSSGEGYKCPVCLDCVRHRE--PSSTKCGHVFCRQCIETSIRATHK------------- 299
Query: 106 CPWCN-MVSLRLICK 119
CP CN +S+R + +
Sbjct: 300 CPMCNKKLSIRQVTR 314
>gi|41617082|tpg|DAA02480.1| TPA_inf: HDC06237 [Drosophila melanogaster]
Length = 177
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 45/107 (42%), Gaps = 23/107 (21%)
Query: 32 SQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVI 91
++ S+L D D E CPIC E NV P CGH C +C+ Q+A+
Sbjct: 32 KRLRSDLGDSD--------EPYMCPICME--NVRRRQPAATPCGHVFCYDCI---QKAIG 78
Query: 92 RLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVESM 138
+ CP CN +R + P+K++ ++ + S+
Sbjct: 79 D----------YKKCPMCNKKIMRGHPAEKRRPPKKDFIFIYFLPSL 115
>gi|405958381|gb|EKC24514.1| B-box type zinc finger protein ncl-1 [Crassostrea gigas]
Length = 1216
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 17/87 (19%)
Query: 25 KNDALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVL 84
++D + + +S SD + + N+ C IC E++ + P VL C HT C+ C+
Sbjct: 8 QSDTVTTASTASNSSD--SEMENANGPNTRCSICQETYTI----PKVLSCFHTFCQPCLE 61
Query: 85 GLQRAVIRLPTLPFQLPFFITCPWCNM 111
LQ + I+CP C+
Sbjct: 62 KLQEVADK-----------ISCPECHQ 77
>gi|341889549|gb|EGT45484.1| hypothetical protein CAEBREN_00409 [Caenorhabditis brenneri]
Length = 276
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 9/56 (16%)
Query: 54 ECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
+C IC ++N + +L CGHT C +C+ +Q+ + + CP C
Sbjct: 26 QCQICCSNYNETTKVAQMLHCGHTFCMDCIRNIQK---------YGNSAHLECPSC 72
>gi|321474665|gb|EFX85630.1| hypothetical protein DAPPUDRAFT_313859 [Daphnia pulex]
Length = 453
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Query: 34 VSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRL 93
++S++S DD E+ L C IC+E ++ +P +L C H+ C C+ G + +
Sbjct: 1 MASKISSDD------EEDFLNCGICFEYYDSDIRVPKLLCCFHSCCIVCLKGTMKEITST 54
Query: 94 PTLPF 98
T PF
Sbjct: 55 ITCPF 59
>gi|125826147|ref|XP_697454.2| PREDICTED: RING finger protein 17 [Danio rerio]
Length = 1485
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 16/67 (23%)
Query: 50 EEGLECPICWESFNVVE-----NLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFI 104
E + C IC + + E NLP+VL CGH C C+ LQ I
Sbjct: 3 ETAVTCKICGSPYTLPEDEAVGNLPHVLLCGHIFCCTCLRALQSQ-----------GNVI 51
Query: 105 TCPWCNM 111
TCP C M
Sbjct: 52 TCPECQM 58
>gi|148922913|ref|NP_001092234.1| uncharacterized protein LOC100073327 [Danio rerio]
gi|148745710|gb|AAI42816.1| Zgc:165481 protein [Danio rerio]
Length = 255
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 31 PSQVSSELSD-DDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCV 83
P + S+ S+ ++ SLN + + LEC IC++ FN P +L C H +C C+
Sbjct: 8 PEESSTNASNTNNTSLNCTTNDELECKICYQRFNTHSRKPKILDCLHRVCARCL 61
>gi|118358184|ref|XP_001012341.1| Kelch motif family protein [Tetrahymena thermophila]
gi|89294107|gb|EAR92095.1| Kelch motif family protein [Tetrahymena thermophila SB210]
Length = 695
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 11/57 (19%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
+ECP+C+ ++ +++P L CGHT C+ C+ + Q FI CP C
Sbjct: 1 MECPMCYILYDEKKHIPRNLPCGHTFCELCLQQI-----------LQPKGFIECPSC 46
>gi|85000851|ref|XP_955144.1| hypothetical protein [Theileria annulata strain Ankara]
gi|65303290|emb|CAI75668.1| hypothetical protein, conserved [Theileria annulata]
Length = 1007
Score = 38.9 bits (89), Expect = 2.7, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Query: 25 KNDALKPSQVSSELSDDDASLN----NSREEGLECPICWESFNVVENLPYVLWCGHTLCK 80
KND ++ + ++ + + D L+ +S L CPIC E F P + CGHT C+
Sbjct: 363 KNDLVRNNSINVLIENSDKKLDEGVMSSILRDLICPICLEYFY----FPVTVACGHTFCR 418
Query: 81 NCV 83
C+
Sbjct: 419 YCI 421
>gi|341894126|gb|EGT50061.1| hypothetical protein CAEBREN_22498 [Caenorhabditis brenneri]
Length = 211
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 44/96 (45%), Gaps = 12/96 (12%)
Query: 44 SLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFF 103
++ + ++ ++C IC + + CGHT+C+ C L L + +
Sbjct: 126 AVGDKADQRVDCRICRHEYTDTRTPRVLKECGHTVCEECADRL---------LTYSNTKY 176
Query: 104 ITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVESMN 139
+ CP+C MV+ + KG KNY ++ +++ M
Sbjct: 177 LICPFCQMVT---VVKGPASLLPKNYGMIDIMDYMK 209
>gi|91077676|ref|XP_974586.1| PREDICTED: similar to E3 ubiquitin-ligase protein COP1 [Tribolium
castaneum]
gi|270001535|gb|EEZ97982.1| hypothetical protein TcasGA2_TC000377 [Tribolium castaneum]
Length = 662
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Query: 55 CPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLP 94
CP+C FN++E Y+ CGHT C C+L A+ R P
Sbjct: 51 CPVC---FNLIEE-AYITKCGHTFCYTCILKSIEALKRCP 86
>gi|55963355|emb|CAI12052.1| novel protein similar to vertebrate SH3 multiple domains 2
(SH3MD2) [Danio rerio]
Length = 843
Score = 38.9 bits (89), Expect = 2.8, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL--QRAVIRLP 94
LECP+C E + VL C HT C+ C+LG+ R +R P
Sbjct: 23 LECPVCLERLDATAK---VLPCQHTFCRRCLLGIVGSRGELRCP 63
>gi|31874062|emb|CAD97947.1| hypothetical protein [Homo sapiens]
Length = 323
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPT-LPFQLPFFITCPW 108
EE L CPIC+ F P VL C HT C+NC+ + +A P ++P + CP
Sbjct: 5 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENILQASGNFYIWRPLRIP--LKCPN 58
Query: 109 CNMVS 113
C ++
Sbjct: 59 CRSIT 63
>gi|410922549|ref|XP_003974745.1| PREDICTED: uncharacterized protein LOC101064877 [Takifugu rubripes]
Length = 321
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 8/62 (12%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMV 112
LEC +C+ FN V P +L C HT C C L R ++ P I CP C V
Sbjct: 147 LECAVCFSQFNNVFRCPKMLQCRHTFCLEC---LARINVK-----SAQPSTIQCPLCRGV 198
Query: 113 SL 114
++
Sbjct: 199 TM 200
>gi|357624146|gb|EHJ75026.1| hypothetical protein KGM_13238 [Danaus plexippus]
Length = 800
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 57/134 (42%), Gaps = 21/134 (15%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMV 112
LEC +C E + VL C HT C C+ + + L CP C
Sbjct: 10 LECSVCLERLDTSSR---VLPCQHTFCLKCLKVIVESHKEL-----------RCPEC--- 52
Query: 113 SLRLICKGNLKFPQKNYYLLWMVESM-NGDRSKSNPHFRGDHQPASSLNRNSAVRNQVSH 171
R++ + ++ N L+ ++E M N R S+ +G H A+S+ SA N+
Sbjct: 53 --RVLVEARVEELPPNVLLMRILEGMKNAPRKTSSARNKGTHAQAASVVHQSARANRQPP 110
Query: 172 AHNGRATCSHVSRQ 185
H GRA VS++
Sbjct: 111 PH-GRALYDFVSKE 123
>gi|354503362|ref|XP_003513750.1| PREDICTED: RING finger protein 224-like [Cricetulus griseus]
Length = 156
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 11/74 (14%)
Query: 40 DDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQ 99
++ A+L R + C IC+ ++++ +LP L+CGHT C+ C+ L P Q
Sbjct: 11 EEGAALTAPRND---CIICYSAYDLSVHLPRRLYCGHTFCQACMRRLD--------TPAQ 59
Query: 100 LPFFITCPWCNMVS 113
+I CP C +
Sbjct: 60 EQHWIPCPQCRQST 73
>gi|321471266|gb|EFX82239.1| hypothetical protein DAPPUDRAFT_302643 [Daphnia pulex]
Length = 561
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 12/63 (19%)
Query: 47 NSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITC 106
N E+ + C +C+ ++ + P L C HT+C +C+ G++ ITC
Sbjct: 5 NDVEDFVTCGVCFCEYDDADKKPKFLQCSHTVCLSCLKGIRDGDT------------ITC 52
Query: 107 PWC 109
P+C
Sbjct: 53 PFC 55
>gi|47224831|emb|CAG06401.1| unnamed protein product [Tetraodon nigroviridis]
Length = 256
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 8/59 (13%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
E EC IC+ F++ P +L C HT C+ C+ L L + P+ ++CP C
Sbjct: 29 EEYECKICYNYFDLDRRAPKILECLHTFCEECLNTLH--------LREERPWRVSCPVC 79
>gi|341883955|gb|EGT39890.1| hypothetical protein CAEBREN_20775 [Caenorhabditis brenneri]
Length = 575
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 11/92 (11%)
Query: 7 NYFPSSLPVTAISGAIRL--KNDALKPSQV-----SSELSDDDASLNNSREEGLECPICW 59
N+ + ++ +SG + L + +KP V S EL D D + S E LEC +C
Sbjct: 114 NFSKNVFIISELSGNLYLFWGDSFIKPKYVRNLETSEELEDFDGIIECSTRE-LECQVCR 172
Query: 60 ESFN--VVENLPYVL-WCGHTLCKNCVLGLQR 88
+ F+ + E +P +L CGH+ C CV L+
Sbjct: 173 QVFSDTINERIPMLLTGCGHSFCSECVEKLRE 204
>gi|190345390|gb|EDK37263.2| hypothetical protein PGUG_01361 [Meyerozyma guilliermondii ATCC
6260]
Length = 1103
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Query: 37 ELSDDDASLNNSREEGL-ECPICWESFNVVENLPYVLWCGHTLCKNCV 83
ELSDD + + +EEG+ CP+C++ F+ ++ CGH +C+NCV
Sbjct: 792 ELSDD-ITGGDGQEEGIFTCPLCYDVFS-RHSITLFPQCGHMICENCV 837
>gi|403285740|ref|XP_003934169.1| PREDICTED: E3 ubiquitin-protein ligase TRIM50 [Saimiri
boliviensis boliviensis]
Length = 487
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 4/37 (10%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
E+ L+CPIC E F P +L CGH+ CK+C++ L
Sbjct: 11 EDRLQCPICLEVFKE----PLMLQCGHSYCKSCLVSL 43
>gi|403362626|gb|EJY81042.1| Protein-L-isoaspartate O-methyltransferase [Oxytricha trifallax]
Length = 512
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%)
Query: 48 SREEGLECPICWESFNVVENLPYVLWCGHTLCKNCV 83
S EE L C +C E N + P L CGHT C C+
Sbjct: 3 SIEEVLSCKVCMERMNNSDRKPLFLSCGHTFCSKCL 38
>gi|146419456|ref|XP_001485690.1| hypothetical protein PGUG_01361 [Meyerozyma guilliermondii ATCC
6260]
Length = 1103
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Query: 37 ELSDDDASLNNSREEGL-ECPICWESFNVVENLPYVLWCGHTLCKNCV 83
ELSDD + + +EEG+ CP+C++ F+ ++ CGH +C+NCV
Sbjct: 792 ELSDD-ITGGDGQEEGIFTCPLCYDVFS-RHSITLFPQCGHMICENCV 837
>gi|17553362|ref|NP_497169.1| Protein F40G9.14 [Caenorhabditis elegans]
gi|351062899|emb|CCD70936.1| Protein F40G9.14 [Caenorhabditis elegans]
Length = 261
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 13/64 (20%)
Query: 54 ECPICWESFNVVENL-PYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMV 112
EC IC+E + V N P V CGHT C++C+ + F I CP+C
Sbjct: 137 ECKICFEKYEVTGNRSPRVFNCGHTYCESCIQVCKHQ------------FQIKCPFCTTT 184
Query: 113 SLRL 116
S ++
Sbjct: 185 SYQI 188
>gi|348521084|ref|XP_003448056.1| PREDICTED: E3 ubiquitin/ISG15 ligase TRIM25-like [Oreochromis
niloticus]
Length = 637
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 50/132 (37%), Gaps = 26/132 (19%)
Query: 48 SREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCP 107
S E+ L C IC +F+ P + CGH C++C+L + +CP
Sbjct: 13 SLEDELTCSICLSTFDC----PVTIPCGHNFCQDCLLATWKES-------------YSCP 55
Query: 108 WCNMVSLRLICKGNLKFPQKNYYLLWMVESMNGDRSKSNPHFRGDHQPASSLNRNSAVRN 167
C + + LK KN L +VE+ SKS P+ + S + + +R
Sbjct: 56 QCRTL---FATRPELK---KNTVLTAVVETFKVRSSKSEPNLAAEE---SQVKKKEIIRC 106
Query: 168 QVSHAHNGRATC 179
TC
Sbjct: 107 DTCMEAEASKTC 118
>gi|47195169|emb|CAF94043.1| unnamed protein product [Tetraodon nigroviridis]
Length = 281
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 28/61 (45%), Gaps = 8/61 (13%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMV 112
LEC IC+ FN V P +L C HT C C L R ++ P I CP C V
Sbjct: 88 LECSICFSQFNNVFRCPKMLQCKHTFCLEC---LARINVK-----SAQPSTIQCPLCRGV 139
Query: 113 S 113
+
Sbjct: 140 T 140
>gi|432906980|ref|XP_004077622.1| PREDICTED: nuclear factor 7, ovary-like [Oryzias latipes]
Length = 510
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 11/65 (16%)
Query: 47 NSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITC 106
++ E+GL+CP+C + F P L CGH C C+ Q P P + PFF C
Sbjct: 2 DAAEDGLKCPVCQDFFTE----PVTLECGHDFCLTCI---QEVWETDP--PSKGPFF--C 50
Query: 107 PWCNM 111
P C +
Sbjct: 51 PECQI 55
>gi|402581002|gb|EJW74951.1| hypothetical protein WUBG_14141, partial [Wuchereria bancrofti]
Length = 86
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 43 ASLNNSREEG--LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
AS+ N ++G + C IC+E F++ + LP +L C H C+ C+ L
Sbjct: 5 ASVANFEKDGFSIRCEICFEPFHIRKRLPKLLPCEHNFCEQCIFSL 50
>gi|354482647|ref|XP_003503509.1| PREDICTED: RING finger protein 183-like [Cricetulus griseus]
Length = 192
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 21/40 (52%)
Query: 47 NSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
+E ECP+CW FN + P VL C H+ C C+ L
Sbjct: 5 QGQELTAECPVCWNPFNNTFHTPKVLDCCHSFCVECLAHL 44
>gi|327278035|ref|XP_003223768.1| PREDICTED: putative E3 ubiquitin-protein ligase SH3RF1-like
isoform 1 [Anolis carolinensis]
Length = 872
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL--QRAVIRLP 94
LECP+C E + VL C HT CK C+LG+ R +R P
Sbjct: 10 LECPVCLERLDASAK---VLPCQHTFCKRCLLGIVSSRNELRCP 50
>gi|395542428|ref|XP_003773133.1| PREDICTED: E3 ubiquitin-protein ligase SH3RF1 [Sarcophilus
harrisii]
Length = 641
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 57/142 (40%), Gaps = 31/142 (21%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMV 112
LECP+C E + VL C HT CK C+LG+ + L CP C
Sbjct: 10 LECPVCLERLDASAK---VLPCQHTFCKRCLLGIVGSRNEL-----------RCPECRT- 54
Query: 113 SLRLICKGNLKFPQKNYYLLWMVESMNGDRSKSNPHFRGDHQPASSLNRNSAVRNQVSHA 172
L+ G + P N L+ +++ + K P G +S +N SA+R Q S
Sbjct: 55 ---LVGSGVDELP-SNILLVRLLDGI-----KQRPRKPGA---SSGINCTSALRVQGSAV 102
Query: 173 HNGRATCSHVSRQSEIRRDEGR 194
N C Q +R + R
Sbjct: 103 VN----CGSKDPQGGQQRVQAR 120
>gi|417410476|gb|JAA51711.1| Putative e3 ubiquitin-protein ligase trim13, partial [Desmodus
rotundus]
Length = 409
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
EE L CPIC F+ P VL C H CK C+ G+ +R +L PF CP C
Sbjct: 7 EEDLTCPICCSLFDD----PRVLPCSHNFCKKCLEGILEGNVR-NSLWRSPPF--KCPTC 59
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMN 139
+ + Q NY L +VE N
Sbjct: 60 R----KETSASGVNSLQVNYSLKGIVEKYN 85
>gi|405978710|gb|EKC43079.1| Tripartite motif-containing protein 59 [Crassostrea gigas]
Length = 522
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 8/62 (12%)
Query: 48 SREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCP 107
+ EE CPIC+ESF P L C HT C +C+ + + P P CP
Sbjct: 29 TTEETTTCPICFESFLT----PRYLPCSHTFCHSCLSSYILSTGKTKDCPVGFP----CP 80
Query: 108 WC 109
C
Sbjct: 81 LC 82
>gi|341878222|gb|EGT34157.1| hypothetical protein CAEBREN_06458 [Caenorhabditis brenneri]
Length = 276
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 9/56 (16%)
Query: 54 ECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
+C IC ++N + +L CGHT C +C+ +Q+ + + CP C
Sbjct: 26 QCQICCSNYNETTKVAQMLHCGHTFCMDCIKNIQK---------YGNSAHLECPSC 72
>gi|307191960|gb|EFN75350.1| GTP-binding protein ARD-1 [Harpegnathos saltator]
Length = 553
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 13/96 (13%)
Query: 53 LECPICWESFNVVE-NLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNM 111
LEC +C E F V +P +L CGHT+C +C+L RL T F + CP+
Sbjct: 25 LECRVCEEVFTVDGVKVPRLLHCGHTVCHSCLL-------RLRTCMSDQQFLL-CPFDRQ 76
Query: 112 -VSLRLICKGNLKFPQKNYYLLWMVESMNGDRSKSN 146
S+R + ++ +KN+ L+ ++E + S+
Sbjct: 77 PTSIR---ENSVYGLKKNFALIELLERLEQSNSEKT 109
>gi|291382777|ref|XP_002708100.1| PREDICTED: ring finger protein 183 [Oryctolagus cuniculus]
Length = 194
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 20/41 (48%)
Query: 46 NNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
R ECP+CW FN + P VL C H+ C C+ L
Sbjct: 4 QQGRPLEAECPVCWNPFNNTFHTPKVLDCCHSFCVECLAHL 44
>gi|402225135|gb|EJU05196.1| hypothetical protein DACRYDRAFT_92618 [Dacryopinax sp. DJM-731 SS1]
Length = 600
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFIT-CPWCNM 111
LEC +C+E P+V+ CGHT C C+ + ++ R P +L CP+C+
Sbjct: 102 LECGLCYELLV----RPFVMSCGHTACGPCLASMWKSKARALAEPDRLELREKHCPYCDK 157
Query: 112 VSLRLICKGNLKFPQKNYYLLWMVESMNG 140
V +G P N+ L +++S G
Sbjct: 158 V-----IRGR---PAVNWTLKSLLQSAEG 178
>gi|325187344|emb|CCA21882.1| RMD5 family protein putative [Albugo laibachii Nc14]
Length = 404
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 7/53 (13%)
Query: 55 CPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCP 107
CP+ E + EN P +L CGH +C++CV +R +P+ F+ P TCP
Sbjct: 346 CPVSKEE-STPENPPVLLKCGHVICRSCV---KRISFNVPSEKFKCP---TCP 391
>gi|85567227|gb|AAI12155.1| Tripartite motif protein 50A [Homo sapiens]
gi|85567586|gb|AAI12153.1| Tripartite motif protein 50A [Homo sapiens]
gi|119590094|gb|EAW69688.1| hCG1642804, isoform CRA_b [Homo sapiens]
gi|119590097|gb|EAW69691.1| hCG1642804, isoform CRA_b [Homo sapiens]
gi|158257580|dbj|BAF84763.1| unnamed protein product [Homo sapiens]
Length = 487
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
E+ L+CPIC E F P +L CGH+ CK C++ L
Sbjct: 11 EDRLQCPICLEVFKE----PLMLQCGHSYCKGCLVSL 43
>gi|119625197|gb|EAX04792.1| SH3 domain containing ring finger 1, isoform CRA_a [Homo sapiens]
Length = 741
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 54/136 (39%), Gaps = 33/136 (24%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL--QRAVIRLPTLPFQLPFFITCPWCN 110
LECP+C E + VL C HT CK C+LG+ R +R CP C
Sbjct: 10 LECPVCLERLDASAK---VLPCQHTFCKRCLLGIVGSRNELR-------------CPECR 53
Query: 111 MVSLRLICKGNLKFPQKNYYLLWMVESMNGDRSKSNPHFRGDHQPASSLNRNSAVRNQVS 170
L+ G + P N L+ +++ + K P S N +A+R+Q S
Sbjct: 54 T----LVGSGVEELP-SNILLVRLLDGIKQRPWKPGPGG------GSGTNCTNALRSQSS 102
Query: 171 HAHNGRATCSHVSRQS 186
N CS QS
Sbjct: 103 TVAN----CSSKDLQS 114
>gi|90086263|dbj|BAE91684.1| unnamed protein product [Macaca fascicularis]
Length = 498
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 53/134 (39%), Gaps = 29/134 (21%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMV 112
LECP+C E + VL C HT CK C+LG+ + L CP C
Sbjct: 10 LECPVCLERLDASAK---VLPCQHTFCKRCLLGIVGSRNEL-----------RCPECRT- 54
Query: 113 SLRLICKGNLKFPQKNYYLLWMVESMNGDRSKSNPHFRGDHQPASSLNRNSAVRNQVSHA 172
L+ G + P N L+ +++ + K P S N +A+R+Q S
Sbjct: 55 ---LVGSGVEELP-SNILLVRLLDGIKQRPWKPGPGG------GSGTNCTNALRSQSSTV 104
Query: 173 HNGRATCSHVSRQS 186
N CS QS
Sbjct: 105 AN----CSSKDLQS 114
>gi|344231092|gb|EGV62974.1| hypothetical protein CANTEDRAFT_122579 [Candida tenuis ATCC
10573]
Length = 463
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 8/58 (13%)
Query: 31 PSQVSSELSDDDASLNN----SREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVL 84
P+ + E S D L N + + L+CPIC + F PY CGHT C+ CVL
Sbjct: 44 PNSFNIEHSYDKPDLRNLVYVGQTDHLQCPICQQPFFN----PYTTLCGHTFCRECVL 97
>gi|224074758|ref|XP_002186858.1| PREDICTED: RING finger protein 222 [Taeniopygia guttata]
Length = 209
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 49/123 (39%), Gaps = 15/123 (12%)
Query: 54 ECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVS 113
ECP+C+E F +E L CGH+ C +C++ A L + I CP C V+
Sbjct: 14 ECPVCYEKFQPLEATHRRLSCGHSFCHDCLVKCLLAA----KLDGHVQSSIVCPVCRFVT 69
Query: 114 L------RLICKGNLKFPQKNYYLLWMVESMNGDRSKSNPHF-----RGDHQPASSLNRN 162
KG L+ P L + +S + HF + PA L R+
Sbjct: 70 FLSEKKAPWPPKGTLEMPLSPSSLCQLAKSEASNVLVVPSHFVMPLQSPERCPAGLLARD 129
Query: 163 SAV 165
+ +
Sbjct: 130 AHI 132
>gi|113679781|ref|NP_001038257.1| E3 ubiquitin-protein ligase SH3RF1 isoform 2 [Danio rerio]
Length = 857
Score = 38.5 bits (88), Expect = 3.2, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL--QRAVIRLP 94
LECP+C E + VL C HT C+ C+LG+ R +R P
Sbjct: 23 LECPVCLERLDATAK---VLPCQHTFCRRCLLGIVGSRGELRCP 63
>gi|148356238|ref|NP_001038952.2| E3 ubiquitin-protein ligase SH3RF1 isoform 1 [Danio rerio]
gi|146327562|gb|AAI41795.1| LOC555925 protein [Danio rerio]
gi|190339698|gb|AAI63246.1| Si:dkey-15j16.4 [Danio rerio]
Length = 880
Score = 38.5 bits (88), Expect = 3.2, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL--QRAVIRLP 94
LECP+C E + VL C HT C+ C+LG+ R +R P
Sbjct: 23 LECPVCLERLDATAK---VLPCQHTFCRRCLLGIVGSRGELRCP 63
>gi|113374135|ref|NP_001038176.1| uncharacterized protein LOC557392 [Danio rerio]
gi|213624663|gb|AAI71409.1| Zgc:136778 [Danio rerio]
gi|213624665|gb|AAI71411.1| Zgc:136778 [Danio rerio]
Length = 460
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 5/41 (12%)
Query: 43 ASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCV 83
ASLN+S EE L CP+C E F P +L C H++CK C+
Sbjct: 4 ASLNDSEEE-LSCPVCCEIFRN----PVLLSCSHSVCKECL 39
>gi|62857583|ref|NP_001015973.1| E3 ubiquitin-protein ligase SH3RF1 [Xenopus (Silurana)
tropicalis]
gi|123892701|sp|Q28E95.1|SH3R1_XENTR RecName: Full=E3 ubiquitin-protein ligase SH3RF1; AltName:
Full=Plenty of SH3s; Short=Protein POSH; AltName:
Full=SH3 domain-containing RING finger protein 1
gi|89271954|emb|CAJ83039.1| sh3 multiple domains 2 [Xenopus (Silurana) tropicalis]
gi|213625631|gb|AAI71011.1| sh3md2 protein [Xenopus (Silurana) tropicalis]
Length = 861
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL--QRAVIRLP 94
LECP+C E + VL C HT CK C+LG+ R +R P
Sbjct: 10 LECPVCLERLDASAK---VLPCQHTFCKRCLLGIVSSRNELRCP 50
>gi|327278037|ref|XP_003223769.1| PREDICTED: putative E3 ubiquitin-protein ligase SH3RF1-like
isoform 2 [Anolis carolinensis]
Length = 835
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL--QRAVIRLP 94
LECP+C E + VL C HT CK C+LG+ R +R P
Sbjct: 10 LECPVCLERLDASAK---VLPCQHTFCKRCLLGIVSSRNELRCP 50
>gi|301781532|ref|XP_002926192.1| PREDICTED: hypothetical protein LOC100470133 [Ailuropoda
melanoleuca]
gi|281345336|gb|EFB20920.1| hypothetical protein PANDA_015799 [Ailuropoda melanoleuca]
Length = 150
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 10/73 (13%)
Query: 41 DDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQL 100
++ + SR +C IC+ ++++ +LP L+CGHT C+ CV L P
Sbjct: 11 EEGTAAGSRRG--DCIICYSAYDLAGHLPRRLYCGHTFCQACVRRLD--------APAPE 60
Query: 101 PFFITCPWCNMVS 113
+I CP C +
Sbjct: 61 QRWIPCPQCRQST 73
>gi|119590095|gb|EAW69689.1| hCG1642804, isoform CRA_c [Homo sapiens]
gi|219517998|gb|AAI43788.1| TRIM50 protein [Homo sapiens]
Length = 486
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
E+ L+CPIC E F P +L CGH+ CK C++ L
Sbjct: 11 EDRLQCPICLEVFKE----PLMLQCGHSYCKGCLVSL 43
>gi|31565492|gb|AAH53671.1| SH3RF1 protein [Homo sapiens]
Length = 1056
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 53/134 (39%), Gaps = 29/134 (21%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMV 112
LECP+C E + VL C HT CK C+LG+ + L CP C
Sbjct: 10 LECPVCLERLDASAK---VLPCQHTFCKRCLLGIVGSRNEL-----------RCPECRT- 54
Query: 113 SLRLICKGNLKFPQKNYYLLWMVESMNGDRSKSNPHFRGDHQPASSLNRNSAVRNQVSHA 172
L+ G + P N L+ +++ + K P S N +A+R+Q S
Sbjct: 55 ---LVGSGVEELP-SNILLVRLLDGIKQRPWKPGPGG------GSGTNCTNALRSQSSTV 104
Query: 173 HNGRATCSHVSRQS 186
N CS QS
Sbjct: 105 AN----CSSKDLQS 114
>gi|260835099|ref|XP_002612547.1| hypothetical protein BRAFLDRAFT_75330 [Branchiostoma floridae]
gi|229297924|gb|EEN68556.1| hypothetical protein BRAFLDRAFT_75330 [Branchiostoma floridae]
Length = 332
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
EEGL C IC E+F ++LP CGHT C+ C+ L
Sbjct: 10 EEGLCCGICHETFRRPKSLP----CGHTFCEECLTKL 42
>gi|449277291|gb|EMC85526.1| Intraflagellar transport protein 80 like protein, partial [Columba
livia]
Length = 939
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 15/68 (22%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPT-----LPFQLPFFI 104
EE L C IC+ F P VL C HT C+NC+ G VI L + P ++P +
Sbjct: 5 EEELTCSICYSIFED----PRVLPCSHTFCRNCLEG----VIHLSSNFSIWRPLRVP--L 54
Query: 105 TCPWCNMV 112
CP C +
Sbjct: 55 KCPTCRSI 62
>gi|392573009|gb|EIW66151.1| hypothetical protein TREMEDRAFT_74819 [Tremella mesenterica DSM
1558]
Length = 2200
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 10/73 (13%)
Query: 35 SSELSDDDASLNNSREEGL---ECPICWESFNVVENLPYVLWCGHTLCKNCVLG-LQRAV 90
+E+ DDD S EGL CP+C+ + P + CGH LC C+ G L+ A+
Sbjct: 278 GAEVLDDDEE-EGSEPEGLAAYSCPVCF----CEPSKPVITACGHILCAKCLHGSLRSAI 332
Query: 91 IRLPT-LPFQLPF 102
R P P PF
Sbjct: 333 ARQPNPYPEHQPF 345
>gi|189441596|gb|AAI67346.1| Unknown (protein for MGC:135632) [Xenopus (Silurana) tropicalis]
Length = 571
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL--QRAVIRLP 94
LECP+C E + VL C HT CK C+LG+ R +R P
Sbjct: 10 LECPVCLERLDASAK---VLPCQHTFCKRCLLGIVSSRNELRCP 50
>gi|410896640|ref|XP_003961807.1| PREDICTED: zinc-binding protein A33-like [Takifugu rubripes]
Length = 463
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLP 97
EE L CPIC + FN LP CGH CK C+ G + LP P
Sbjct: 10 EELLLCPICLDLFN----LPISTPCGHNFCKECIQGYWE-IAELPQCP 52
>gi|341888289|gb|EGT44224.1| hypothetical protein CAEBREN_19829 [Caenorhabditis brenneri]
Length = 256
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 39/84 (46%), Gaps = 23/84 (27%)
Query: 55 CPICWESFNVV-ENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVS 113
C IC + ++ V E+ P VL CGHTLC C R+ TL + CP+C S
Sbjct: 190 CEICLQKYSEVHEHTPRVLNCGHTLCLECAR-------RVQTLG-----GVLCPFCREGS 237
Query: 114 LRLICKGNLKFPQ---KNYYLLWM 134
LK PQ KNY +L M
Sbjct: 238 W-------LKLPQNLPKNYAVLDM 254
>gi|351705281|gb|EHB08200.1| hypothetical protein GW7_03922 [Heterocephalus glaber]
Length = 240
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 22/30 (73%)
Query: 54 ECPICWESFNVVENLPYVLWCGHTLCKNCV 83
+C +C+ ++++ +LP L+CGHT C+ CV
Sbjct: 22 DCVVCYSAYDLTGHLPRRLYCGHTFCQACV 51
>gi|332255052|ref|XP_003276649.1| PREDICTED: E3 ubiquitin-protein ligase TRIM50 isoform 1 [Nomascus
leucogenys]
gi|332255054|ref|XP_003276650.1| PREDICTED: E3 ubiquitin-protein ligase TRIM50 isoform 2 [Nomascus
leucogenys]
Length = 487
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
E+ L+CPIC E F P +L CGH+ CK C++ L
Sbjct: 11 EDRLQCPICLEVFKE----PLMLQCGHSYCKGCLVSL 43
>gi|297822121|ref|XP_002878943.1| hypothetical protein ARALYDRAFT_901352 [Arabidopsis lyrata subsp.
lyrata]
gi|297324782|gb|EFH55202.1| hypothetical protein ARALYDRAFT_901352 [Arabidopsis lyrata subsp.
lyrata]
Length = 110
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Query: 47 NSREEGLECPICWESFNVVENLPYVLWCGHTLCKNC 82
N REE ++C IC+ES+ EN+ V CGH CK C
Sbjct: 77 NDREENIQCEICFESY-TRENITTVS-CGHPYCKTC 110
>gi|212284110|sp|A5D8S5.2|SH3R1_DANRE RecName: Full=E3 ubiquitin-protein ligase SH3RF1; AltName:
Full=Plenty of SH3s; Short=Protein POSH; AltName:
Full=SH3 domain-containing RING finger protein 1
Length = 867
Score = 38.5 bits (88), Expect = 3.4, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL--QRAVIRLP 94
LECP+C E + VL C HT C+ C+LG+ R +R P
Sbjct: 10 LECPVCLERLDATAK---VLPCQHTFCRRCLLGIVGSRGELRCP 50
>gi|308460581|ref|XP_003092593.1| hypothetical protein CRE_19491 [Caenorhabditis remanei]
gi|308252994|gb|EFO96946.1| hypothetical protein CRE_19491 [Caenorhabditis remanei]
Length = 342
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 49/122 (40%), Gaps = 25/122 (20%)
Query: 2 QTPIGNYFPSSLPVTA-----ISGAIRLK-----------NDALKPSQVSSEL------- 38
+T I Y +P TA ++G IRLK D ++P Q S L
Sbjct: 191 ETWIYMYIVCYIPCTAEFAVVMAGWIRLKEKLPNSNQSARKDTVQPPQESQVLVTVPTVP 250
Query: 39 -SDDDASLNNSREEGLECPICWESFNVVENLPYVL-WCGHTLCKNCVLGLQRAVIRLPTL 96
++ + G +C IC + +P +L CGHT+C+ C+ R I+
Sbjct: 251 REEEQYETTGNSTSGTKCNICTLPYTTTTVIPRMLVGCGHTVCEECIQKFPRQDIQCVLC 310
Query: 97 PF 98
PF
Sbjct: 311 PF 312
>gi|355746928|gb|EHH51542.1| hypothetical protein EGM_10939 [Macaca fascicularis]
Length = 403
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTL-PFQLPFFITCPW 108
EE L CPIC+ F P VL C HT C+NC+ + +A P ++P + CP
Sbjct: 5 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENILQASGNFYIWRPLRIP--LKCPN 58
Query: 109 CNMV 112
C +
Sbjct: 59 CRSI 62
>gi|293347402|ref|XP_001063645.2| PREDICTED: RING finger protein 183-like [Rattus norvegicus]
gi|293359292|ref|XP_575838.3| PREDICTED: RING finger protein 183-like [Rattus norvegicus]
Length = 190
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 49 REEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
+E ECP+CW FN + P VL C H+ C C+ L
Sbjct: 7 QELKAECPVCWNPFNNTFHTPKVLDCCHSFCVECLAHL 44
>gi|431918336|gb|ELK17563.1| Putative E3 ubiquitin-protein ligase SH3RF1 [Pteropus alecto]
Length = 856
Score = 38.5 bits (88), Expect = 3.5, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL--QRAVIRLP 94
LECP+C E + VL C HT CK C+LG+ R +R P
Sbjct: 10 LECPVCLERLDASAK---VLPCQHTFCKRCLLGIVGSRNELRCP 50
>gi|291385911|ref|XP_002709514.1| PREDICTED: SH3 domain containing ring finger 1 [Oryctolagus
cuniculus]
Length = 896
Score = 38.5 bits (88), Expect = 3.5, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL--QRAVIRLP 94
LECP+C E + VL C HT CK C+LG+ R +R P
Sbjct: 10 LECPVCLERLDASAK---VLPCQHTFCKRCLLGIVGSRNELRCP 50
>gi|224049723|ref|XP_002186988.1| PREDICTED: E3 ubiquitin-protein ligase SH3RF1 [Taeniopygia
guttata]
Length = 873
Score = 38.5 bits (88), Expect = 3.5, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL--QRAVIRLP 94
LECP+C E + VL C HT CK C+LG+ R +R P
Sbjct: 10 LECPVCLERLDASAK---VLPCQHTFCKRCLLGIVSSRNELRCP 50
>gi|197246924|gb|AAI69143.1| Unknown (protein for MGC:189605) [Xenopus (Silurana) tropicalis]
Length = 412
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL--QRAVIRLP 94
LECP+C E + VL C HT CK C+LG+ R +R P
Sbjct: 10 LECPVCLERLDASAK---VLPCQHTFCKRCLLGIVSSRNELRCP 50
>gi|125819455|ref|XP_001337479.1| PREDICTED: e3 ubiquitin-protein ligase RNF182-like [Danio rerio]
Length = 247
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 8/59 (13%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
E LEC IC+ F+ P VL C H +C C+ + ++ L + P I+CP+C
Sbjct: 21 EELECKICYNRFDTRARKPKVLSCLHRVCAKCL----KKMVELDS----SPSIISCPFC 71
>gi|449273060|gb|EMC82679.1| Putative E3 ubiquitin-protein ligase SH3RF1, partial [Columba
livia]
Length = 871
Score = 38.5 bits (88), Expect = 3.5, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL--QRAVIRLP 94
LECP+C E + VL C HT CK C+LG+ R +R P
Sbjct: 16 LECPVCLERLDASAK---VLPCQHTFCKRCLLGIVSSRNELRCP 56
>gi|426356494|ref|XP_004045601.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
TRIM50 [Gorilla gorilla gorilla]
Length = 488
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
E+ L+CPIC E F P +L CGH+ CK C++ L
Sbjct: 11 EDRLQCPICLEVFKE----PLMLQCGHSYCKGCLVSL 43
>gi|348566787|ref|XP_003469183.1| PREDICTED: E3 ubiquitin-protein ligase SH3RF1-like [Cavia
porcellus]
Length = 889
Score = 38.5 bits (88), Expect = 3.5, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL--QRAVIRLP 94
LECP+C E + VL C HT CK C+LG+ R +R P
Sbjct: 10 LECPVCLERLDASAK---VLPCQHTFCKRCLLGIVGSRNELRCP 50
>gi|224060947|ref|XP_002198657.1| PREDICTED: tripartite motif-containing protein 59 [Taeniopygia
guttata]
Length = 386
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
EE L CPIC ++F+ P VL C HT C C+ GL R
Sbjct: 5 EEELTCPICCDTFSE----PQVLPCSHTFCGPCLPGLLR 39
>gi|10432612|dbj|BAB13822.1| unnamed protein product [Homo sapiens]
Length = 712
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 54/136 (39%), Gaps = 33/136 (24%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL--QRAVIRLPTLPFQLPFFITCPWCN 110
LECP+C E + VL C HT CK C+LG+ R +R CP C
Sbjct: 10 LECPVCLERLDASAK---VLPCQHTFCKRCLLGIVGSRNELR-------------CPECR 53
Query: 111 MVSLRLICKGNLKFPQKNYYLLWMVESMNGDRSKSNPHFRGDHQPASSLNRNSAVRNQVS 170
L+ G + P N L+ +++ + K P S N +A+R+Q S
Sbjct: 54 T----LVGSGVEELP-SNILLVRLLDGIKQRPWKPGPGG------GSGTNCTNALRSQSS 102
Query: 171 HAHNGRATCSHVSRQS 186
N CS QS
Sbjct: 103 TVAN----CSSKDLQS 114
>gi|431898169|gb|ELK06864.1| E3 ubiquitin-protein ligase TRIM50 [Pteropus alecto]
Length = 487
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
E+ L+CPIC E F P +L CGH+ CK C++ L
Sbjct: 11 EDRLQCPICLEVFRE----PLMLQCGHSYCKGCLVSL 43
>gi|355559905|gb|EHH16633.1| hypothetical protein EGK_11948 [Macaca mulatta]
gi|380811990|gb|AFE77870.1| tripartite motif-containing protein 59 [Macaca mulatta]
Length = 402
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTL-PFQLPFFITCPW 108
EE L CPIC+ F P VL C HT C+NC+ + +A P ++P + CP
Sbjct: 5 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENILQASGNFYIWRPLRIP--LKCPN 58
Query: 109 CNMV 112
C +
Sbjct: 59 CRSI 62
>gi|114613903|ref|XP_527777.2| PREDICTED: E3 ubiquitin-protein ligase TRIM50 isoform 2 [Pan
troglodytes]
gi|114613905|ref|XP_001144726.1| PREDICTED: E3 ubiquitin-protein ligase TRIM50 isoform 1 [Pan
troglodytes]
Length = 487
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
E+ L+CPIC E F P +L CGH+ CK C++ L
Sbjct: 11 EDRLQCPICLEVFKE----PLMLQCGHSYCKGCLVSL 43
>gi|74195287|dbj|BAE28367.1| unnamed protein product [Mus musculus]
Length = 828
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL--QRAVIRLP 94
LECP+C E + VL C HT CK C+LG+ R +R P
Sbjct: 10 LECPVCLERLDASAK---VLPCQHTFCKRCLLGIVGSRNELRCP 50
>gi|402861071|ref|XP_003894931.1| PREDICTED: tripartite motif-containing protein 59 isoform 1 [Papio
anubis]
gi|383417701|gb|AFH32064.1| tripartite motif-containing protein 59 [Macaca mulatta]
gi|383417703|gb|AFH32065.1| tripartite motif-containing protein 59 [Macaca mulatta]
gi|383417705|gb|AFH32066.1| tripartite motif-containing protein 59 [Macaca mulatta]
Length = 403
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTL-PFQLPFFITCPW 108
EE L CPIC+ F P VL C HT C+NC+ + +A P ++P + CP
Sbjct: 5 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENILQASGNFYIWRPLRIP--LKCPN 58
Query: 109 CNMV 112
C +
Sbjct: 59 CRSI 62
>gi|328723715|ref|XP_001951659.2| PREDICTED: hypothetical protein LOC100161045 [Acyrthosiphon
pisum]
Length = 911
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
L CP+C F++ P L C HT+CK+C+ L +
Sbjct: 12 LACPVCCNGFDIKTRHPISLGCAHTVCKSCLSNLPK 47
>gi|213514884|ref|NP_001133371.1| Tripartite motif-containing protein 13 [Salmo salar]
gi|209152241|gb|ACI33103.1| Tripartite motif-containing protein 13 [Salmo salar]
Length = 384
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 41/93 (44%), Gaps = 12/93 (12%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
EE L CPIC F P VL C H+ CK C+ G+ R P ++ PF CP C
Sbjct: 5 EEDLTCPICCCLFED----PRVLPCSHSFCKKCLEGILEGNNRGPI--WRPPF--KCPSC 56
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMNGDR 142
+ + + Q NY L +VE N R
Sbjct: 57 RKETP----QNGINTLQINYSLRGIVEKYNKIR 85
>gi|444731990|gb|ELW72317.1| E3 ubiquitin-protein ligase TRIM13 [Tupaia chinensis]
Length = 407
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
EE L CPIC F+ P VL C H CK C+ G+ +R +L PF CP C
Sbjct: 5 EEDLTCPICCSLFDD----PRVLPCSHNFCKKCLEGILEGNVR-NSLWRPSPF--KCPTC 57
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMN 139
+ + Q NY L +VE N
Sbjct: 58 R----KETSATGVNSLQVNYSLKGIVEKYN 83
>gi|308464716|ref|XP_003094623.1| hypothetical protein CRE_30408 [Caenorhabditis remanei]
gi|308247172|gb|EFO91124.1| hypothetical protein CRE_30408 [Caenorhabditis remanei]
Length = 607
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
+ C +C+E+FN P +L CGH C++C+ L
Sbjct: 21 ITCEVCFEAFNHQTRPPKLLPCGHNFCESCIFSL 54
>gi|260841653|ref|XP_002614025.1| hypothetical protein BRAFLDRAFT_67391 [Branchiostoma floridae]
gi|229299415|gb|EEN70034.1| hypothetical protein BRAFLDRAFT_67391 [Branchiostoma floridae]
Length = 1084
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 60/148 (40%), Gaps = 29/148 (19%)
Query: 35 SSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGL--QRAVIR 92
+ E++D + L C IC E FN P L C HT C+ C++ L +R+
Sbjct: 398 AEEMADGGSDKGEKPRPILHCGICLEPFNN----PKALACLHTFCQECLVNLVGKRS--- 450
Query: 93 LPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVE-SMNGDRSKSNPHF-- 149
F+TCP C S+ L KG P W+ E S + R S ++
Sbjct: 451 ----------FLTCPTCR-TSVSLPPKGVQGLPDN----FWLSELSTSPTRRSSTLYWEH 495
Query: 150 --RGDHQPASSLNRNSAVRNQVSHAHNG 175
+G + A+ R+S + S + G
Sbjct: 496 LNKGSSKGANGAERDSGISETDSTSPTG 523
>gi|426222429|ref|XP_004005394.1| PREDICTED: E3 ubiquitin-protein ligase SH3RF1 [Ovis aries]
Length = 811
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL--QRAVIRLP 94
LECP+C E + VL C HT CK C+LG+ R +R P
Sbjct: 10 LECPVCLERLDASAK---VLPCQHTFCKRCLLGIVGSRNELRCP 50
>gi|351707785|gb|EHB10704.1| RING finger protein 182 [Heterocephalus glaber]
Length = 247
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 34 VSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCV 83
++S+L +D A S E LEC IC+ +N+ + P VL C H +C C+
Sbjct: 1 MASQLPEDPAEAQVSDE--LECKICYSRYNLKQRKPKVLGCCHRVCAKCL 48
>gi|23943803|ref|NP_705724.1| RING finger protein 183 [Mus musculus]
gi|81901304|sp|Q8QZS5.1|RN183_MOUSE RecName: Full=RING finger protein 183
gi|19343865|gb|AAH25512.1| Ring finger protein 183 [Mus musculus]
gi|26383514|dbj|BAC25537.1| unnamed protein product [Mus musculus]
gi|148699199|gb|EDL31146.1| ring finger protein 183, isoform CRA_a [Mus musculus]
gi|148699200|gb|EDL31147.1| ring finger protein 183, isoform CRA_a [Mus musculus]
Length = 190
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 21/40 (52%)
Query: 47 NSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
+E ECP+CW FN + P VL C H+ C C+ L
Sbjct: 5 QGQELRAECPVCWNPFNNTFHTPKVLDCCHSFCVECLAHL 44
>gi|296195193|ref|XP_002745271.1| PREDICTED: E3 ubiquitin-protein ligase SH3RF1-like [Callithrix
jacchus]
Length = 889
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL--QRAVIRLP 94
LECP+C E + VL C HT CK C+LG+ R +R P
Sbjct: 10 LECPVCLERLDASAK---VLPCQHTFCKRCLLGIVGSRNELRCP 50
>gi|3002588|gb|AAC40070.1| Plenty of SH3s [Mus musculus]
Length = 892
Score = 38.1 bits (87), Expect = 3.8, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL--QRAVIRLP 94
LECP+C E + VL C HT CK C+LG+ R +R P
Sbjct: 10 LECPVCLERLDASAK---VLPCQHTFCKRCLLGIVGSRNELRCP 50
>gi|197100658|ref|NP_001125455.1| E3 ubiquitin-protein ligase SH3RF1 [Pongo abelii]
gi|75042067|sp|Q5RBR0.1|SH3R1_PONAB RecName: Full=E3 ubiquitin-protein ligase SH3RF1; AltName:
Full=Plenty of SH3s; Short=Protein POSH; AltName:
Full=SH3 domain-containing RING finger protein 1
gi|55728100|emb|CAH90800.1| hypothetical protein [Pongo abelii]
Length = 888
Score = 38.1 bits (87), Expect = 3.8, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL--QRAVIRLP 94
LECP+C E + VL C HT CK C+LG+ R +R P
Sbjct: 10 LECPVCLERLDASAK---VLPCQHTFCKRCLLGIVGSRNELRCP 50
>gi|50510955|dbj|BAD32463.1| mKIAA1494 protein [Mus musculus]
Length = 914
Score = 38.1 bits (87), Expect = 3.8, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL--QRAVIRLP 94
LECP+C E + VL C HT CK C+LG+ R +R P
Sbjct: 32 LECPVCLERLDASAK---VLPCQHTFCKRCLLGIVGSRNELRCP 72
>gi|403295699|ref|XP_003938768.1| PREDICTED: E3 ubiquitin-protein ligase SH3RF1 [Saimiri
boliviensis boliviensis]
Length = 889
Score = 38.1 bits (87), Expect = 3.8, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL--QRAVIRLP 94
LECP+C E + VL C HT CK C+LG+ R +R P
Sbjct: 10 LECPVCLERLDASAK---VLPCQHTFCKRCLLGIVGSRNELRCP 50
>gi|397502413|ref|XP_003821855.1| PREDICTED: E3 ubiquitin-protein ligase SH3RF1 [Pan paniscus]
Length = 888
Score = 38.1 bits (87), Expect = 3.8, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL--QRAVIRLP 94
LECP+C E + VL C HT CK C+LG+ R +R P
Sbjct: 10 LECPVCLERLDASAK---VLPCQHTFCKRCLLGIVGSRNELRCP 50
>gi|354473224|ref|XP_003498836.1| PREDICTED: E3 ubiquitin-protein ligase SH3RF1 [Cricetulus
griseus]
gi|344245274|gb|EGW01378.1| Putative E3 ubiquitin-protein ligase SH3RF1 [Cricetulus griseus]
Length = 885
Score = 38.1 bits (87), Expect = 3.8, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL--QRAVIRLP 94
LECP+C E + VL C HT CK C+LG+ R +R P
Sbjct: 10 LECPVCLERLDASAK---VLPCQHTFCKRCLLGIVGSRNELRCP 50
>gi|189046785|sp|Q69ZI1.2|SH3R1_MOUSE RecName: Full=E3 ubiquitin-protein ligase SH3RF1; AltName:
Full=Plenty of SH3s; Short=Protein POSH; AltName:
Full=SH3 domain-containing RING finger protein 1;
AltName: Full=SH3 multiple domains protein 2
Length = 892
Score = 38.1 bits (87), Expect = 3.8, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL--QRAVIRLP 94
LECP+C E + VL C HT CK C+LG+ R +R P
Sbjct: 10 LECPVCLERLDASAK---VLPCQHTFCKRCLLGIVGSRNELRCP 50
>gi|149412057|ref|XP_001506870.1| PREDICTED: putative E3 ubiquitin-protein ligase SH3RF1-like
[Ornithorhynchus anatinus]
Length = 878
Score = 38.1 bits (87), Expect = 3.8, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL--QRAVIRLP 94
LECP+C E + VL C HT CK C+LG+ R +R P
Sbjct: 10 LECPVCLERLDASAK---VLPCQHTFCKRCLLGIVGSRNELRCP 50
>gi|114596798|ref|XP_517530.2| PREDICTED: E3 ubiquitin-protein ligase SH3RF1 isoform 2 [Pan
troglodytes]
gi|410223450|gb|JAA08944.1| SH3 domain containing ring finger 1 [Pan troglodytes]
gi|410264144|gb|JAA20038.1| SH3 domain containing ring finger 1 [Pan troglodytes]
gi|410302384|gb|JAA29792.1| SH3 domain containing ring finger 1 [Pan troglodytes]
gi|410355081|gb|JAA44144.1| SH3 domain containing ring finger 1 [Pan troglodytes]
Length = 888
Score = 38.1 bits (87), Expect = 3.8, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL--QRAVIRLP 94
LECP+C E + VL C HT CK C+LG+ R +R P
Sbjct: 10 LECPVCLERLDASAK---VLPCQHTFCKRCLLGIVGSRNELRCP 50
>gi|114145507|ref|NP_067481.2| E3 ubiquitin-protein ligase SH3RF1 [Mus musculus]
Length = 891
Score = 38.1 bits (87), Expect = 3.8, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL--QRAVIRLP 94
LECP+C E + VL C HT CK C+LG+ R +R P
Sbjct: 10 LECPVCLERLDASAK---VLPCQHTFCKRCLLGIVGSRNELRCP 50
>gi|51988887|ref|NP_065921.2| E3 ubiquitin-protein ligase SH3RF1 [Homo sapiens]
gi|205830834|sp|Q7Z6J0.2|SH3R1_HUMAN RecName: Full=E3 ubiquitin-protein ligase SH3RF1; AltName:
Full=Plenty of SH3s; Short=Protein POSH; AltName:
Full=RING finger protein 142; AltName: Full=SH3
domain-containing RING finger protein 1; AltName:
Full=SH3 multiple domains protein 2
gi|119625199|gb|EAX04794.1| SH3 domain containing ring finger 1, isoform CRA_c [Homo sapiens]
Length = 888
Score = 38.1 bits (87), Expect = 3.8, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL--QRAVIRLP 94
LECP+C E + VL C HT CK C+LG+ R +R P
Sbjct: 10 LECPVCLERLDASAK---VLPCQHTFCKRCLLGIVGSRNELRCP 50
>gi|308498277|ref|XP_003111325.1| hypothetical protein CRE_03728 [Caenorhabditis remanei]
gi|308240873|gb|EFO84825.1| hypothetical protein CRE_03728 [Caenorhabditis remanei]
Length = 330
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 24/94 (25%)
Query: 55 CPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRL------PTLPFQLPFFITCPW 108
C +C E ++ + P +L C HT+C++C+ L+ R PT+ I+CP
Sbjct: 19 CQVCLEPYDGKRHTPKILQCAHTVCESCINVLEEQSRRRYNTGLDPTI-----VSISCP- 72
Query: 109 CNMVSLRLICKGNLKFP----QKNYYLLWMVESM 138
+C+ K P + NY L+ +V+ M
Sbjct: 73 --------VCRTETKTPRACIRTNYQLIDVVDGM 98
>gi|167998999|ref|XP_001752205.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
patens]
gi|162696600|gb|EDQ82938.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
patens]
Length = 1520
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 32/63 (50%), Gaps = 10/63 (15%)
Query: 47 NSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITC 106
S EE ECPIC E ++ + VL CGH LC C+L L + TLP Q I C
Sbjct: 1190 ESNEE--ECPICHE---ILGSRFMVLPCGHVLCCKCMLSL----VERSTLP-QSQKKINC 1239
Query: 107 PWC 109
P C
Sbjct: 1240 PSC 1242
>gi|66472544|ref|NP_001018439.1| tripartite motif-containing 13 [Danio rerio]
gi|82192762|sp|Q503I2.1|TRI13_DANRE RecName: Full=Tripartite motif-containing 13
gi|63100698|gb|AAH95319.1| Tripartite motif-containing 13 [Danio rerio]
Length = 404
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 41/90 (45%), Gaps = 13/90 (14%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
EE L CPIC F P VL C H+ CK C+ G+ R PT ++ PF CP C
Sbjct: 5 EEDLTCPICCCLFED----PRVLPCSHSFCKKCLEGILDGN-RSPT--WRPPF--KCPTC 55
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMN 139
++ + Q NY L +VE N
Sbjct: 56 RKETVH----NGIASLQVNYSLRGIVEKYN 81
>gi|92097996|gb|AAI15264.1| Zgc:136778 [Danio rerio]
Length = 457
Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 5/41 (12%)
Query: 43 ASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCV 83
ASLN+S EE L CP+C E F P +L C H++CK C+
Sbjct: 2 ASLNDSEEE-LSCPVCCEIFRN----PVLLSCSHSVCKECL 37
>gi|268578013|ref|XP_002643989.1| Hypothetical protein CBG17369 [Caenorhabditis briggsae]
Length = 185
Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 6/60 (10%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLG-LQRAVIRLPTLPFQLPFFITCPWC 109
E L C +C FN+ +P L CGH+ C+ C+ G +Q +P +L CP C
Sbjct: 36 ETLRCAVC---FNIYTGVPRTLTCGHSFCQQCIEGVIQEERDDVPNPNGRLSLH--CPIC 90
>gi|403365714|gb|EJY82647.1| Kelch motif family protein [Oxytricha trifallax]
Length = 1211
Score = 38.1 bits (87), Expect = 3.9, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 53 LECPICWESFNVVENLPYVL-WCGHTLCKNCVL 84
++CP C + ++ N+P +L CGHTLC+ C+L
Sbjct: 1 MQCPQCIQLYHQETNIPRILIGCGHTLCEKCIL 33
>gi|403356302|gb|EJY77741.1| hypothetical protein OXYTRI_00622 [Oxytricha trifallax]
Length = 1552
Score = 38.1 bits (87), Expect = 3.9, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 19/82 (23%)
Query: 55 CPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQ-------LPFFITCP 107
C IC F NLP VL+CG LC C+ + ++ LP + + + I CP
Sbjct: 748 CAICSSKFEETTNLPRVLFCGDCLCDQCI---KDSI--LPLIKIEEGLDDKIITKQIQCP 802
Query: 108 WCNMVSL-------RLICKGNL 122
CN + + +IC N
Sbjct: 803 ICNSIHIFKLSSDGYIICNDNF 824
>gi|403348858|gb|EJY73876.1| hypothetical protein OXYTRI_04871 [Oxytricha trifallax]
Length = 1552
Score = 38.1 bits (87), Expect = 3.9, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 19/82 (23%)
Query: 55 CPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQ-------LPFFITCP 107
C IC F NLP VL+CG LC C+ + ++ LP + + + I CP
Sbjct: 748 CAICSSKFEETTNLPRVLFCGDCLCDQCI---KDSI--LPLIKIEEGLDDKIITKQIQCP 802
Query: 108 WCNMVSL-------RLICKGNL 122
CN + + +IC N
Sbjct: 803 ICNSIHIFKLSSDGYIICNDNF 824
>gi|334331058|ref|XP_001365551.2| PREDICTED: putative E3 ubiquitin-protein ligase SH3RF1 isoform 1
[Monodelphis domestica]
Length = 807
Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL--QRAVIRLP 94
LECP+C E + VL C HT CK C+LG+ R +R P
Sbjct: 10 LECPVCLERLDASAK---VLPCQHTFCKRCLLGIVGSRNELRCP 50
>gi|301627584|ref|XP_002942953.1| PREDICTED: RING finger protein 208-like [Xenopus (Silurana)
tropicalis]
Length = 247
Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 8/60 (13%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
E LECP C +N P +L C H++C+ C+ L + + FI+CP C
Sbjct: 126 EPLECPTCGHMYNFTNKRPRILSCLHSVCEECLQILYESCPKY--------KFISCPTCK 177
>gi|426345945|ref|XP_004040653.1| PREDICTED: E3 ubiquitin-protein ligase SH3RF1 [Gorilla gorilla
gorilla]
Length = 887
Score = 38.1 bits (87), Expect = 3.9, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL--QRAVIRLP 94
LECP+C E + VL C HT CK C+LG+ R +R P
Sbjct: 10 LECPVCLERLDASAK---VLPCQHTFCKRCLLGIVGSRNELRCP 50
>gi|384942656|gb|AFI34933.1| putative E3 ubiquitin-protein ligase SH3RF1 [Macaca mulatta]
Length = 888
Score = 38.1 bits (87), Expect = 3.9, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL--QRAVIRLP 94
LECP+C E + VL C HT CK C+LG+ R +R P
Sbjct: 10 LECPVCLERLDASAK---VLPCQHTFCKRCLLGIVGSRNELRCP 50
>gi|380815078|gb|AFE79413.1| putative E3 ubiquitin-protein ligase SH3RF1 [Macaca mulatta]
Length = 888
Score = 38.1 bits (87), Expect = 3.9, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL--QRAVIRLP 94
LECP+C E + VL C HT CK C+LG+ R +R P
Sbjct: 10 LECPVCLERLDASAK---VLPCQHTFCKRCLLGIVGSRNELRCP 50
>gi|301765613|ref|XP_002918229.1| PREDICTED: LOW QUALITY PROTEIN: putative E3 ubiquitin-protein
ligase SH3RF1-like [Ailuropoda melanoleuca]
Length = 878
Score = 38.1 bits (87), Expect = 3.9, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL--QRAVIRLP 94
LECP+C E + VL C HT CK C+LG+ R +R P
Sbjct: 10 LECPVCLERLDASAK---VLPCQHTFCKRCLLGIVGSRNELRCP 50
>gi|291244525|ref|XP_002742146.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 690
Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 13/65 (20%)
Query: 45 LNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFI 104
L REE L C IC E ++ P +L C HT CK C++ L Q +
Sbjct: 15 LTEIREEFLYCAICLERYS----EPKILPCHHTFCKKCLVQLTEK---------QAQMLL 61
Query: 105 TCPWC 109
CP C
Sbjct: 62 ICPTC 66
>gi|148696699|gb|EDL28646.1| SH3 domain containing ring finger 1 [Mus musculus]
Length = 881
Score = 38.1 bits (87), Expect = 3.9, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL--QRAVIRLP 94
LECP+C E + VL C HT CK C+LG+ R +R P
Sbjct: 10 LECPVCLERLDASAK---VLPCQHTFCKRCLLGIVGSRNELRCP 50
>gi|403365667|gb|EJY82622.1| Kelch motif family protein [Oxytricha trifallax]
Length = 1211
Score = 38.1 bits (87), Expect = 3.9, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 53 LECPICWESFNVVENLPYVL-WCGHTLCKNCVL 84
++CP C + ++ N+P +L CGHTLC+ C+L
Sbjct: 1 MQCPQCIQLYHQETNIPRILIGCGHTLCEKCIL 33
>gi|355687717|gb|EHH26301.1| hypothetical protein EGK_16230 [Macaca mulatta]
Length = 888
Score = 38.1 bits (87), Expect = 3.9, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL--QRAVIRLP 94
LECP+C E + VL C HT CK C+LG+ R +R P
Sbjct: 10 LECPVCLERLDASAK---VLPCQHTFCKRCLLGIVGSRNELRCP 50
>gi|109076140|ref|XP_001082524.1| PREDICTED: putative E3 ubiquitin-protein ligase SH3RF1 [Macaca
mulatta]
Length = 890
Score = 38.1 bits (87), Expect = 3.9, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL--QRAVIRLP 94
LECP+C E + VL C HT CK C+LG+ R +R P
Sbjct: 10 LECPVCLERLDASAK---VLPCQHTFCKRCLLGIVGSRNELRCP 50
>gi|440898577|gb|ELR50042.1| Intraflagellar transport protein 80-like protein [Bos grunniens
mutus]
Length = 948
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTL-PFQLPFFITCPW 108
E+ L CPIC+ F P VL C HT C+NC+ + +A P ++P + CP
Sbjct: 5 EDELTCPICYSIFED----PRVLPCSHTFCRNCLENVLQATGNFYIWRPLRIP--LKCPN 58
Query: 109 CNMV 112
C +
Sbjct: 59 CRSI 62
>gi|297680255|ref|XP_002817916.1| PREDICTED: E3 ubiquitin-protein ligase TRIM50 [Pongo abelii]
Length = 489
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
E+ L+CPIC E F P +L CGH+ CK C++ L
Sbjct: 13 EDRLQCPICLEVFKE----PLMLQCGHSYCKGCLVSL 45
>gi|402870826|ref|XP_003899401.1| PREDICTED: E3 ubiquitin-protein ligase SH3RF1 [Papio anubis]
Length = 888
Score = 38.1 bits (87), Expect = 4.0, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL--QRAVIRLP 94
LECP+C E + VL C HT CK C+LG+ R +R P
Sbjct: 10 LECPVCLERLDASAK---VLPCQHTFCKRCLLGIVGSRNELRCP 50
>gi|308460631|ref|XP_003092618.1| hypothetical protein CRE_19483 [Caenorhabditis remanei]
gi|308253019|gb|EFO96971.1| hypothetical protein CRE_19483 [Caenorhabditis remanei]
Length = 324
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 13/99 (13%)
Query: 39 SDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPF 98
S+D S + GLEC IC + ++ CGHT+C+ C++ L + R
Sbjct: 236 SEDVYSNQPTSPTGLECNICMLGYTETVTPRVLIGCGHTVCQECIVSLPKPENR------ 289
Query: 99 QLPFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVES 137
+ CP+C + + G+ KNY ++ +V S
Sbjct: 290 -----VVCPFCRKHT--KVPGGSATQLPKNYAIMDLVRS 321
>gi|402861073|ref|XP_003894932.1| PREDICTED: tripartite motif-containing protein 59 isoform 2 [Papio
anubis]
Length = 611
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPT-LPFQLPFFITCPW 108
EE L CPIC+ F P VL C HT C+NC+ + +A P ++P + CP
Sbjct: 213 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENILQASGNFYIWRPLRIP--LKCPN 266
Query: 109 CNMV 112
C +
Sbjct: 267 CRSI 270
>gi|354500023|ref|XP_003512102.1| PREDICTED: tripartite motif-containing protein 59 [Cricetulus
griseus]
gi|344258459|gb|EGW14563.1| Tripartite motif-containing protein 59 [Cricetulus griseus]
Length = 403
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPT-LPFQLPFFITCPW 108
EE L CPIC+ F P VL C HT C+NC+ + +A P ++P + CP
Sbjct: 5 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENVLQASGNFYIWRPLRIP--LKCPN 58
Query: 109 CNMV 112
C +
Sbjct: 59 CRSI 62
>gi|308487395|ref|XP_003105893.1| hypothetical protein CRE_19695 [Caenorhabditis remanei]
gi|308254949|gb|EFO98901.1| hypothetical protein CRE_19695 [Caenorhabditis remanei]
Length = 326
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 18/104 (17%)
Query: 42 DASLNNSREEGLECPICWESFN--VVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQ 99
D N+ R + L+C IC ++ + + +P +L CGHT C C L + +
Sbjct: 230 DQETNDLRYQDLKCSICKLFYHESIKKRIPKMLSCGHTFCSGCAKMLHKG-------DYY 282
Query: 100 LPFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVESMNGDRS 143
F CP C+ + L +KNY LL +++ + D+
Sbjct: 283 DSF--KCPICSKRTF-------LDDLKKNYALLDLIQEIKQDKK 317
>gi|297672397|ref|XP_002814288.1| PREDICTED: tripartite motif-containing protein 59 isoform 1 [Pongo
abelii]
Length = 403
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTL-PFQLPFFITCPW 108
EE L CPIC+ F P VL C HT C+NC+ + +A P ++P + CP
Sbjct: 5 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENILQASGNFYIWRPLRIP--LKCPN 58
Query: 109 CNMV 112
C +
Sbjct: 59 CRSI 62
>gi|224032023|gb|ACN35087.1| unknown [Zea mays]
Length = 212
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 40/103 (38%), Gaps = 30/103 (29%)
Query: 50 EEGLECPICWES-FNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQ----LPFFI 104
E L CPIC ++ FN PY L CGH CK C G I FQ P
Sbjct: 103 EYSLTCPICLDTLFN-----PYALSCGHLFCKACACGAASVYI------FQGVKSAPPEA 151
Query: 105 TCPWC----------NMVSLRLICKGNLKFPQKNYYLLWMVES 137
CP C M L L+ LK K+Y+L + E
Sbjct: 152 KCPVCRAVGVFDRAVRMTELELL----LKRRDKDYFLQRLREE 190
>gi|332217710|ref|XP_003258002.1| PREDICTED: E3 ubiquitin-protein ligase SH3RF1 [Nomascus
leucogenys]
Length = 887
Score = 38.1 bits (87), Expect = 4.1, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL--QRAVIRLP 94
LECP+C E + VL C HT CK C+LG+ R +R P
Sbjct: 10 LECPVCLERLDASAK---VLPCQHTFCKRCLLGIVGSRNELRCP 50
>gi|37805139|gb|AAH60113.1| SH3 domain containing ring finger 1 [Mus musculus]
gi|38173720|gb|AAH60696.1| SH3 domain containing ring finger 1 [Mus musculus]
Length = 861
Score = 38.1 bits (87), Expect = 4.1, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL--QRAVIRLP 94
LECP+C E + VL C HT CK C+LG+ R +R P
Sbjct: 10 LECPVCLERLDASAK---VLPCQHTFCKRCLLGIVGSRNELRCP 50
>gi|118366589|ref|XP_001016510.1| hypothetical protein TTHERM_00188340 [Tetrahymena thermophila]
gi|89298277|gb|EAR96265.1| hypothetical protein TTHERM_00188340 [Tetrahymena thermophila
SB210]
Length = 336
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 4/38 (10%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAV 90
LECPIC N + N P L CGHT C++C GL+ ++
Sbjct: 22 LECPICS---NFLHN-PLRLTCGHTFCQSCFEGLKASI 55
>gi|13879442|gb|AAH06700.1| Tripartite motif-containing 59 [Mus musculus]
gi|19343567|gb|AAH25430.1| Tripartite motif-containing 59 [Mus musculus]
Length = 403
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPT-LPFQLPFFITCPW 108
EE L CPIC+ F P VL C HT C+NC+ + +A P ++P + CP
Sbjct: 5 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENVLQASGNFYIWRPLRIP--LKCPN 58
Query: 109 CNMV 112
C +
Sbjct: 59 CRSI 62
>gi|170295836|ref|NP_080139.3| tripartite motif-containing protein 59 [Mus musculus]
gi|342187077|sp|Q922Y2.2|TRI59_MOUSE RecName: Full=Tripartite motif-containing protein 59; AltName:
Full=RING finger protein 1
Length = 403
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPT-LPFQLPFFITCPW 108
EE L CPIC+ F P VL C HT C+NC+ + +A P ++P + CP
Sbjct: 5 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENVLQASGNFYIWRPLRIP--LKCPN 58
Query: 109 CNMV 112
C +
Sbjct: 59 CRSI 62
>gi|363740286|ref|XP_415552.2| PREDICTED: RING finger protein 208-like [Gallus gallus]
Length = 273
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 8/60 (13%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
E LECP C +N P +L C H++C+ C+ L + + FI+CP C
Sbjct: 152 EPLECPTCGHMYNFTNKRPRILSCLHSVCEECLQILYESCPKYK--------FISCPTCK 203
>gi|268560648|ref|XP_002646258.1| Hypothetical protein CBG11962 [Caenorhabditis briggsae]
Length = 293
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Query: 53 LECPICWESFNVVENLPYVLW-CGHTLCKNCV 83
LEC IC+ F+ VE+LP VL CGHT C +C+
Sbjct: 41 LECSICFYDFDDVEHLPKVLEACGHTFCYSCL 72
>gi|340506625|gb|EGR32722.1| kelch motif family protein, putative [Ichthyophthirius multifiliis]
Length = 626
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 18/82 (21%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMV 112
+ECP+C E ++ + +P L CGHT C+ C+ + ++ L + ++ CP C
Sbjct: 1 MECPMCAELYDEIIKIPRNLPCGHTFCEYCL----KQILSLKS-------YLECPNC--- 46
Query: 113 SLRLICKGNLKFPQ--KNYYLL 132
R + NL+ Q KNY L
Sbjct: 47 --RRKFERNLQIDQLSKNYIAL 66
>gi|308463889|ref|XP_003094215.1| hypothetical protein CRE_10593 [Caenorhabditis remanei]
gi|308248063|gb|EFO92015.1| hypothetical protein CRE_10593 [Caenorhabditis remanei]
Length = 886
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 44/104 (42%), Gaps = 19/104 (18%)
Query: 10 PSSLPVTAISGAIRLKNDALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLP 69
+ L V G L+ND+ ++++E +D D + EC IC F+ +P
Sbjct: 106 TTELLVVLTGGFRSLENDSSDIRELNTERTDSDPII--------ECNICLVEFSA-SRIP 156
Query: 70 YVLW-CGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMV 112
+L CGHT+C+ C L R L I CP C V
Sbjct: 157 RILKKCGHTICERCADILLRQRCNLG---------IACPMCQTV 191
>gi|402863190|ref|XP_003895914.1| PREDICTED: E3 ubiquitin-protein ligase TRIM50 [Papio anubis]
Length = 488
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
E+ L+CPIC E F P +L CGH+ CK C++ L
Sbjct: 11 EDRLQCPICLEVFKE----PLMLRCGHSYCKGCLVSL 43
>gi|296192250|ref|XP_002743978.1| PREDICTED: E3 ubiquitin-protein ligase TRIM50 [Callithrix
jacchus]
Length = 487
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 4/37 (10%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
E+ L+CPIC E F P +L CGH+ CK+C++ L
Sbjct: 11 EDRLQCPICLEVFKE----PLMLQCGHSYCKSCLVSL 43
>gi|109066279|ref|XP_001110857.1| PREDICTED: e3 ubiquitin-protein ligase TRIM50-like [Macaca
mulatta]
gi|355560555|gb|EHH17241.1| E3 ubiquitin-protein ligase TRIM50 [Macaca mulatta]
gi|355747585|gb|EHH52082.1| E3 ubiquitin-protein ligase TRIM50 [Macaca fascicularis]
Length = 488
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
E+ L+CPIC E F P +L CGH+ CK C++ L
Sbjct: 11 EDRLQCPICLEVFKE----PLMLRCGHSYCKGCLVSL 43
>gi|358417349|ref|XP_003583618.1| PREDICTED: uncharacterized protein LOC100138708 [Bos taurus]
Length = 256
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 32/70 (45%), Gaps = 16/70 (22%)
Query: 53 LECPICWESFNVVENLPYVL------WCGHTLCKNCVLGLQ------RAVIRLPTLPFQL 100
L+C IC+ FN+ + P L CGHTLC C+ L AV R +L
Sbjct: 89 LDCNICYRPFNLGDRAPRRLPGTARARCGHTLCTACLRELAARGDGGGAVARA----VRL 144
Query: 101 PFFITCPWCN 110
ITCP+C
Sbjct: 145 RRLITCPFCR 154
>gi|308463895|ref|XP_003094218.1| hypothetical protein CRE_10629 [Caenorhabditis remanei]
gi|308248066|gb|EFO92018.1| hypothetical protein CRE_10629 [Caenorhabditis remanei]
Length = 336
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Query: 52 GLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNM 111
G EC IC ++ + CGHT+C+ C L + R T I CP+C
Sbjct: 255 GCECKICLVEYSTTRIPRMLRGCGHTICEECAGQLLKNGTRFTTYNIA-SRSIRCPFCRK 313
Query: 112 VSLRLICKGNLKFPQKNYYLLWMV 135
++ + +G ++ KNY L+ ++
Sbjct: 314 IT---VVQGTVQQMPKNYDLMEVI 334
>gi|293341762|ref|XP_002725041.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2-like [Rattus
norvegicus]
gi|293353201|ref|XP_001070577.2| PREDICTED: E3 ubiquitin-protein ligase RFWD2-like [Rattus
norvegicus]
Length = 154
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 5/99 (5%)
Query: 56 PICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSLR 115
PIC F++VE+ Y+ CGH++C NC+ R P + I + N +
Sbjct: 37 PIC---FDMVED-AYMTKCGHSVCYNCIHQSLEDNNRCPKCNHVVD-DIDLLYPNFLVNE 91
Query: 116 LICKGNLKFPQKNYYLLWMVESMNGDRSKSNPHFRGDHQ 154
LI K + +K + L V S NG R + P F+G Q
Sbjct: 92 LILKQKQRSEEKRFKLDPSVSSTNGHRWQIFPDFQGTDQ 130
>gi|198416684|ref|XP_002125601.1| PREDICTED: similar to MGC81061 protein, partial [Ciona
intestinalis]
Length = 348
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 55 CPICWESFNVVENLPYVLWCGHTLCKNCVLGLQ 87
C +C FN + P L CGHT+C+ C+ L+
Sbjct: 26 CSVCENEFNRTDRCPISLGCGHTVCRGCLGDLK 58
>gi|345790530|ref|XP_855736.2| PREDICTED: E3 ubiquitin-protein ligase SH3RF1 isoform 3 [Canis
lupus familiaris]
Length = 882
Score = 38.1 bits (87), Expect = 4.3, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL--QRAVIRLP 94
LECP+C E + VL C HT CK C+LG+ R +R P
Sbjct: 10 LECPVCLERLDASAK---VLPCQHTFCKRCLLGIVGSRNELRCP 50
>gi|344288227|ref|XP_003415852.1| PREDICTED: putative E3 ubiquitin-protein ligase SH3RF1-like
[Loxodonta africana]
Length = 883
Score = 38.1 bits (87), Expect = 4.3, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL--QRAVIRLP 94
LECP+C E + VL C HT CK C+LG+ R +R P
Sbjct: 10 LECPVCLERLDASAK---VLPCQHTFCKRCLLGIVGSRNELRCP 50
>gi|332214610|ref|XP_003256428.1| PREDICTED: tripartite motif-containing protein 59 isoform 4
[Nomascus leucogenys]
Length = 410
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTL-PFQLPFFITCPW 108
EE L CPIC+ F P VL C HT C+NC+ + +A P ++P + CP
Sbjct: 12 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENILQASGNFYIWRPLRIP--LKCPN 65
Query: 109 CNMV 112
C +
Sbjct: 66 CRSI 69
>gi|301614337|ref|XP_002936657.1| PREDICTED: hypothetical protein LOC100491611 [Xenopus (Silurana)
tropicalis]
Length = 267
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 8/57 (14%)
Query: 54 ECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
EC IC+ F++ P +L C HT C+ C+ L R R P+ ++CP C
Sbjct: 21 ECKICYNYFDLDRRAPKLLECLHTFCQECLNTLHRREDR--------PWRLSCPVCR 69
>gi|148233096|ref|NP_001091534.1| E3 ubiquitin-protein ligase SH3RF1 [Bos taurus]
gi|189046709|sp|A5D7F8.1|SH3R1_BOVIN RecName: Full=E3 ubiquitin-protein ligase SH3RF1; AltName:
Full=Plenty of SH3s; Short=Protein POSH; AltName:
Full=SH3 domain-containing RING finger protein 1
gi|146186619|gb|AAI40540.1| SH3RF1 protein [Bos taurus]
Length = 840
Score = 38.1 bits (87), Expect = 4.3, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL--QRAVIRLP 94
LECP+C E + VL C HT CK C+LG+ R +R P
Sbjct: 10 LECPVCLERLDASAK---VLPCQHTFCKRCLLGIVGSRNELRCP 50
>gi|38454266|ref|NP_942059.1| E3 ubiquitin-protein ligase SH3RF1 [Rattus norvegicus]
gi|81864866|sp|Q71F54.1|SH3R1_RAT RecName: Full=E3 ubiquitin-protein ligase SH3RF1; AltName:
Full=Plenty of SH3s; Short=Protein POSH; AltName:
Full=SH3 domain-containing RING finger protein 1;
AltName: Full=SH3 multiple domains protein 2
gi|33325072|gb|AAQ08184.1| putative scaffolding protein POSH [Rattus norvegicus]
Length = 894
Score = 38.1 bits (87), Expect = 4.4, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL--QRAVIRLP 94
LECP+C E + VL C HT CK C+LG+ R +R P
Sbjct: 10 LECPVCLERLDASAK---VLPCQHTFCKRCLLGIVGSRNELRCP 50
>gi|358058500|dbj|GAA95463.1| hypothetical protein E5Q_02117 [Mixia osmundae IAM 14324]
Length = 231
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 10/59 (16%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFIT--CPWC 109
L CP+C+E+F + + L CGHTLC+ C L++ V+R T+ P I CP C
Sbjct: 134 LSCPLCYETFGRRQVV--TLACGHTLCQTC---LEQWVVRSSTVD---PDRIVPECPEC 184
>gi|149698090|ref|XP_001499219.1| PREDICTED: putative E3 ubiquitin-protein ligase SH3RF1 [Equus
caballus]
Length = 886
Score = 38.1 bits (87), Expect = 4.4, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL--QRAVIRLP 94
LECP+C E + VL C HT CK C+LG+ R +R P
Sbjct: 10 LECPVCLERLDASAK---VLPCQHTFCKRCLLGIVGSRNELRCP 50
>gi|85701917|ref|NP_001028582.1| RING finger protein 224 [Mus musculus]
gi|123794628|sp|Q3UIW8.1|RN224_MOUSE RecName: Full=RING finger protein 224
gi|74144832|dbj|BAE27388.1| unnamed protein product [Mus musculus]
gi|187955338|gb|AAI47427.1| Gm757 protein [Mus musculus]
gi|187955344|gb|AAI47426.1| Gm757 protein [Mus musculus]
Length = 156
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 11/74 (14%)
Query: 40 DDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQ 99
++ +L SR + C IC+ ++++ +LP L+CGHT C+ C+ L +P
Sbjct: 11 EEGTALTASRND---CIICYSAYDLSVHLPRRLYCGHTFCQACMQRLD--------MPAH 59
Query: 100 LPFFITCPWCNMVS 113
+I CP C +
Sbjct: 60 EQHWIPCPQCRQST 73
>gi|30023818|ref|NP_835226.1| E3 ubiquitin-protein ligase TRIM50 [Homo sapiens]
gi|56404881|sp|Q86XT4.1|TRI50_HUMAN RecName: Full=E3 ubiquitin-protein ligase TRIM50; AltName:
Full=Tripartite motif-containing protein 50
gi|29465648|gb|AAL91071.1| tripartite motif protein 50 isoform alpha [Homo sapiens]
Length = 487
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
E+ L+CPIC E F P +L CGH+ CK C++ L
Sbjct: 11 EDWLQCPICLEVFKE----PLMLQCGHSYCKGCLVSL 43
>gi|335280806|ref|XP_003353663.1| PREDICTED: RING finger protein 183-like isoform 2 [Sus scrofa]
Length = 245
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 19/33 (57%)
Query: 54 ECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
ECP+CW FN + P VL C H+ C C+ L
Sbjct: 65 ECPVCWNPFNNTFHTPKVLDCCHSFCVECLAHL 97
>gi|29465650|gb|AAL91072.1| tripartite motif protein 50 isoform beta [Homo sapiens]
Length = 486
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
E+ L+CPIC E F P +L CGH+ CK C++ L
Sbjct: 11 EDWLQCPICLEVFKE----PLMLQCGHSYCKGCLVSL 43
>gi|403265974|ref|XP_003925180.1| PREDICTED: LOW QUALITY PROTEIN: tripartite motif-containing protein
59 [Saimiri boliviensis boliviensis]
Length = 600
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPT-LPFQLPFFITCPW 108
EE L CPIC+ F P VL C HT C+NC+ + +A P ++P + CP
Sbjct: 202 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENVLQASGNFYIWRPLRIP--LKCPN 255
Query: 109 CNMV 112
C +
Sbjct: 256 CRSI 259
>gi|395511918|ref|XP_003760197.1| PREDICTED: E3 ubiquitin-protein ligase NHLRC1 [Sarcophilus
harrisii]
Length = 405
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Query: 34 VSSELSDDDASLNNSREEG----LECPICWESFNVVENL-PYVLWCGHTLCKNCVLGLQR 88
+S+E S+ + +L E LEC +C+E F+ ++ P L CGH +C CV L +
Sbjct: 1 MSAEASEREPALRTLVREAEISLLECKVCFEKFSHEKDRRPRNLTCGHVICLGCVTALVQ 60
Query: 89 AVIRLPTLPF 98
R PF
Sbjct: 61 PRTRTLECPF 70
>gi|327261165|ref|XP_003215402.1| PREDICTED: e3 ubiquitin-protein ligase TRIM13-like [Anolis
carolinensis]
Length = 408
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
EE L CPIC F+ LP C H CK C+ G+ R + Q PF CP C
Sbjct: 5 EEDLTCPICCSLFDDPRALP----CSHNFCKKCLEGILEGNAR-SIIWRQSPF--KCPTC 57
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMN 139
+ + NL Q NY L +VE N
Sbjct: 58 RKETT-VTGVNNL---QVNYSLKGIVEKYN 83
>gi|332214604|ref|XP_003256425.1| PREDICTED: tripartite motif-containing protein 59 isoform 1
[Nomascus leucogenys]
gi|332214606|ref|XP_003256426.1| PREDICTED: tripartite motif-containing protein 59 isoform 2
[Nomascus leucogenys]
gi|332214608|ref|XP_003256427.1| PREDICTED: tripartite motif-containing protein 59 isoform 3
[Nomascus leucogenys]
gi|332214612|ref|XP_003256429.1| PREDICTED: tripartite motif-containing protein 59 isoform 5
[Nomascus leucogenys]
gi|332214614|ref|XP_003256430.1| PREDICTED: tripartite motif-containing protein 59 isoform 6
[Nomascus leucogenys]
gi|332214618|ref|XP_003256432.1| PREDICTED: tripartite motif-containing protein 59 isoform 8
[Nomascus leucogenys]
Length = 403
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTL-PFQLPFFITCPW 108
EE L CPIC+ F P VL C HT C+NC+ + +A P ++P + CP
Sbjct: 5 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENILQASGNFYIWRPLRIP--LKCPN 58
Query: 109 CNMV 112
C +
Sbjct: 59 CRSI 62
>gi|328726131|ref|XP_003248759.1| PREDICTED: RING finger and CCCH-type zinc finger
domain-containing protein 2-like [Acyrthosiphon pisum]
Length = 263
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
L CP+C F++ P L C HT+CK+C+ L
Sbjct: 12 LACPVCCNGFDIKTRHPISLGCAHTVCKSCLSNL 45
>gi|334349731|ref|XP_001378274.2| PREDICTED: tripartite motif-containing protein 59-like [Monodelphis
domestica]
Length = 338
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 9/63 (14%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
EE L CPIC+ F P VL C HT C+ C+ + +A + F ITCP C
Sbjct: 5 EEELTCPICYSIFED----PRVLPCSHTFCRKCLENVLQA-----SGNFYGRRDITCPTC 55
Query: 110 NMV 112
+
Sbjct: 56 RHI 58
>gi|291400092|ref|XP_002716385.1| PREDICTED: tripartite motif-containing 59 [Oryctolagus cuniculus]
Length = 403
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPT-LPFQLPFFITCPW 108
E+ L CPIC+ F P VL C HT CKNC+ + +A P ++P + CP
Sbjct: 5 EDELTCPICYSIFED----PRVLPCSHTFCKNCLENVLQASGNFYIWRPLRIP--LKCPN 58
Query: 109 CNMV 112
C +
Sbjct: 59 CRSI 62
>gi|410956633|ref|XP_003984944.1| PREDICTED: E3 ubiquitin-protein ligase SH3RF1 [Felis catus]
Length = 941
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL--QRAVIRLP 94
LECP+C E + VL C HT CK C+LG+ R +R P
Sbjct: 10 LECPVCLERLDASAK---VLPCQHTFCKRCLLGIVGSRNELRCP 50
>gi|449270029|gb|EMC80756.1| RING finger protein 208, partial [Columba livia]
Length = 159
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 8/60 (13%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
E LECP C +N P +L C H++C+ C+ L + + FI+CP C
Sbjct: 55 EPLECPTCGHMYNFTNKRPRILSCLHSVCEECLQILYESCPKYK--------FISCPTCK 106
>gi|426363720|ref|XP_004048982.1| PREDICTED: RING finger protein 224 [Gorilla gorilla gorilla]
Length = 156
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 8/64 (12%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
EE +C IC ++++ +LP L+CGHT C+ CV L P Q +I CP C
Sbjct: 19 EERRDCNICCSAYDLSGHLPRRLYCGHTFCQACVRRLDTPA------PEQ--HWIPCPQC 70
Query: 110 NMVS 113
+
Sbjct: 71 RQST 74
>gi|317418623|emb|CBN80661.1| Uncharacterized protein [Dicentrarchus labrax]
Length = 370
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 45 LNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR-AVIRLPTLPFQLPFF 103
+++ E+ L CP+C + F P VL C H+ CK+C+ R ++ L ++P
Sbjct: 1 MSSESEKNLSCPVCQDIFRD----PVVLSCSHSFCKDCLQTWWREKIVHECPLCKKIP-L 55
Query: 104 ITCPWCNMVSLRLICKG 120
++ P CN+V L+ +C+
Sbjct: 56 LSDPACNLV-LKNLCEA 71
>gi|338720405|ref|XP_003364161.1| PREDICTED: hypothetical protein LOC100629886 [Equus caballus]
Length = 176
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 33 QVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCV 83
Q + ++ + +R +C IC+ ++++ +LP L+CGHT C+ CV
Sbjct: 23 QPEGPQASEEGTAAGTRRG--DCIICYSAYDLTGHLPRRLYCGHTFCQACV 71
>gi|308804708|ref|XP_003079666.1| SNF2 domain-containing protein / helicase domain-containing prote
(ISS) [Ostreococcus tauri]
gi|116058122|emb|CAL53311.1| SNF2 domain-containing protein / helicase domain-containing prote
(ISS) [Ostreococcus tauri]
Length = 1574
Score = 38.1 bits (87), Expect = 4.7, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 46 NNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
+ ++++ +ECPIC +SF V CGH C C L L R
Sbjct: 1258 DEAKDKRMECPICIQSFRDATAEVCVFPCGHRTCVQCALDLVR 1300
>gi|12855490|dbj|BAB30354.1| unnamed protein product [Mus musculus]
Length = 389
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRA 89
EE L CPIC+ F P VL C HT C+NC+ + +A
Sbjct: 5 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENVLQA 40
>gi|414872121|tpg|DAA50678.1| TPA: putative SPX (SYG1/Pho81/XPR1) domain-containing protein [Zea
mays]
Length = 365
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 40/103 (38%), Gaps = 30/103 (29%)
Query: 50 EEGLECPICWES-FNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQ----LPFFI 104
E L CPIC ++ FN PY L CGH CK C G I FQ P
Sbjct: 256 EYSLTCPICLDTLFN-----PYALSCGHLFCKACACGAASVYI------FQGVKSAPPEA 304
Query: 105 TCPWC----------NMVSLRLICKGNLKFPQKNYYLLWMVES 137
CP C M L L+ LK K+Y+L + E
Sbjct: 305 KCPVCRAVGVFDRAVRMTELELL----LKRRDKDYFLQRLREE 343
>gi|410904543|ref|XP_003965751.1| PREDICTED: RING finger protein 183-like [Takifugu rubripes]
Length = 324
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 8/63 (12%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
E EC +C+ +++ V P +L CGHT C C+ + L TL +CP C
Sbjct: 108 EDTECAVCFCTYDNVFKTPKLLACGHTFCLECLARINVTSAELKTL--------SCPICR 159
Query: 111 MVS 113
++
Sbjct: 160 ELT 162
>gi|351700376|gb|EHB03295.1| RING finger protein 183 [Heterocephalus glaber]
Length = 192
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 19/33 (57%)
Query: 54 ECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
ECP+CW FN + P VL C H+ C C+ L
Sbjct: 12 ECPVCWNPFNNTFHTPKVLDCCHSFCVECLAHL 44
>gi|348574716|ref|XP_003473136.1| PREDICTED: RING finger protein 224-like [Cavia porcellus]
Length = 157
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 23/33 (69%)
Query: 54 ECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
+C IC+ ++++ +LP L+CGHT C+ CV L
Sbjct: 22 DCIICYSAYDLTGHLPRRLYCGHTFCQACVRRL 54
>gi|332229785|ref|XP_003264067.1| PREDICTED: RING finger protein 183 isoform 1 [Nomascus
leucogenys]
gi|441622640|ref|XP_004088851.1| PREDICTED: RING finger protein 183 isoform 2 [Nomascus
leucogenys]
Length = 192
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 46 NNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
+E ECP+CW FN + P +L C H+ C C+ L
Sbjct: 4 QQGQELEAECPVCWNPFNNTFHTPKMLDCCHSFCVECLAHL 44
>gi|410948545|ref|XP_003980992.1| PREDICTED: putative E3 ubiquitin-protein ligase SH3RF2 [Felis
catus]
Length = 734
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 46/111 (41%), Gaps = 30/111 (27%)
Query: 54 ECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC---- 109
ECP+C+E +V VL C HT CK C LQR F+ + CP C
Sbjct: 11 ECPVCFEKLDVTAK---VLPCQHTFCKPC---LQRI--------FKAHKELRCPECRTLV 56
Query: 110 ---------NMVSLRL---ICKGNLKFPQKNYYLLWMVESMNGDRSKSNPH 148
N++ +RL + G ++ ++ + +G R KSNP
Sbjct: 57 FCSIEALPANLLLVRLLDGVRSGQSLGRGGSFRRPGVLTAQDGRRGKSNPR 107
>gi|312079802|ref|XP_003142330.1| hypothetical protein LOAG_06746 [Loa loa]
gi|307762507|gb|EFO21741.1| hypothetical protein LOAG_06746 [Loa loa]
Length = 583
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 15/90 (16%)
Query: 50 EEGLECPICWESFNVVENLPYVL-WCGHTLCKNCVLGLQRAVIRLPTLPFQLPFF-ITCP 107
+ GLEC +C ES++ P VL CGHT+C C L + P + CP
Sbjct: 6 DAGLECALCHESYSSEIRTPRVLHGCGHTVCHTCCSAL---------VDVSAPIAQVVCP 56
Query: 108 WCNMVSLRLI-CKGNLKFPQKNYYLLWMVE 136
+ V+L C +LK KN+ L+ ++E
Sbjct: 57 FDRTVTLLAEPCVLSLK---KNFALIEIIE 83
>gi|291223764|ref|XP_002731878.1| PREDICTED: tripartite motif protein 2-like [Saccoglossus
kowalevskii]
Length = 807
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 19/94 (20%)
Query: 45 LNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFI 104
LN RE+ L C IC+E F P L C HT C+ C++ + Q +
Sbjct: 12 LNEVREDFLSCSICFEFF----KKPRFLPCLHTFCEKCLVDYKA----------QSEGVL 57
Query: 105 TCPWCNMVSLRLICKGNLKFPQKNYYLLWMVESM 138
C C RL C ++ + N+++ +++S+
Sbjct: 58 RCATC-----RLQCDTPIQGLKSNFFIASLIDSV 86
>gi|115497842|ref|NP_001070136.1| uncharacterized protein LOC767730 [Danio rerio]
gi|115313089|gb|AAI24314.1| Zgc:153310 [Danio rerio]
Length = 316
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
+ EC +C+ +F+ V P +L CGHT C C L R + P + +TCP C
Sbjct: 103 QDTECIVCFCNFDNVFKTPKLLSCGHTFCLEC---LARINVNSPEI-----KTLTCPICR 154
Query: 111 MVS 113
V+
Sbjct: 155 EVT 157
>gi|147900177|ref|NP_001090370.1| ring finger protein 208 [Xenopus laevis]
gi|114107888|gb|AAI23251.1| MGC154509 protein [Xenopus laevis]
Length = 235
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 8/59 (13%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
E LECP C +N P +L C H++C+ C+ L + + FI+CP C
Sbjct: 114 EPLECPTCGHMYNFTNKRPRILSCLHSVCEECLQILYESCPKYK--------FISCPTC 164
>gi|390367870|ref|XP_003731345.1| PREDICTED: uncharacterized protein LOC100890954 [Strongylocentrotus
purpuratus]
Length = 621
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 16/98 (16%)
Query: 43 ASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQ-LP 101
A+L ++ LECP+C F P +L C HT CK C+ L FQ
Sbjct: 3 ANLKQVVDQNLECPVCLSFFKE----PKILTCSHTFCKGCLQSF---------LDFQPDE 49
Query: 102 FFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVESMN 139
++CP C + ++ G + Q N + +VE +
Sbjct: 50 QKLSCPVCRKET--VVTDGEVSRLQTNLTVRALVEDVQ 85
>gi|334347426|ref|XP_003341926.1| PREDICTED: tripartite motif-containing protein 59-like [Monodelphis
domestica]
Length = 529
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 28/63 (44%), Gaps = 15/63 (23%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNC---VLGLQRAVIRLPTLPFQLPFFITC 106
EE L CPIC+ F P VL C HT C+ C VL + V R +TC
Sbjct: 5 EEELMCPICYSIFED----PRVLPCSHTFCRKCLENVLQVSENVFRQS--------IMTC 52
Query: 107 PWC 109
P C
Sbjct: 53 PTC 55
>gi|301760054|ref|XP_002915828.1| PREDICTED: RING finger protein 183-like [Ailuropoda melanoleuca]
gi|281339931|gb|EFB15515.1| hypothetical protein PANDA_003853 [Ailuropoda melanoleuca]
Length = 190
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 19/33 (57%)
Query: 54 ECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
ECP+CW FN + P VL C H+ C C+ L
Sbjct: 10 ECPVCWNPFNNTFHTPKVLDCCHSFCVECLAHL 42
>gi|449681015|ref|XP_002158024.2| PREDICTED: roquin-like [Hydra magnipapillata]
Length = 828
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 55 CPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
CP+C F P L CGH++CK+C+L L +
Sbjct: 14 CPVCQNEFKSGLKPPISLGCGHSICKSCLLRLSK 47
>gi|308456831|ref|XP_003090829.1| hypothetical protein CRE_16492 [Caenorhabditis remanei]
gi|308260368|gb|EFP04321.1| hypothetical protein CRE_16492 [Caenorhabditis remanei]
Length = 979
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 13/64 (20%)
Query: 47 NSREEGLECPICWESFNVVENLPYVL-WCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFIT 105
+S G EC IC ++ +P +L CGHT+C+ C+ L R F+
Sbjct: 307 SSSTSGTECNICMLRYSTTTVIPRILVGCGHTVCQACIQKLPRQE------------FVL 354
Query: 106 CPWC 109
CP+C
Sbjct: 355 CPFC 358
Score = 37.4 bits (85), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 13/64 (20%)
Query: 47 NSREEGLECPICWESFNVVENLPYVL-WCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFIT 105
+S G EC IC ++ +P +L CGHT+C+ C+ L R F+
Sbjct: 688 SSSTSGTECNICMLRYSTTTVIPRMLVGCGHTVCQACIQKLPRQE------------FVL 735
Query: 106 CPWC 109
CP+C
Sbjct: 736 CPFC 739
>gi|226502861|ref|NP_001142606.1| uncharacterized protein LOC100274874 [Zea mays]
gi|194702306|gb|ACF85237.1| unknown [Zea mays]
gi|195607262|gb|ACG25461.1| hypothetical protein [Zea mays]
gi|195625324|gb|ACG34492.1| hypothetical protein [Zea mays]
Length = 342
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 40/103 (38%), Gaps = 30/103 (29%)
Query: 50 EEGLECPICWES-FNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQ----LPFFI 104
E L CPIC ++ FN PY L CGH CK C G I FQ P
Sbjct: 233 EYSLTCPICLDTLFN-----PYALSCGHLFCKACACGAASVYI------FQGVKSAPPEA 281
Query: 105 TCPWC----------NMVSLRLICKGNLKFPQKNYYLLWMVES 137
CP C M L L+ LK K+Y+L + E
Sbjct: 282 KCPVCRAVGVFDRAVRMTELELL----LKRRDKDYFLQRLREE 320
>gi|341879803|gb|EGT35738.1| hypothetical protein CAEBREN_07658 [Caenorhabditis brenneri]
Length = 184
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 32 SQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCV 83
++V +L+ A++ E CP CW+ + P V CGHTLC+ C+
Sbjct: 77 AEVDGQLARQTAAIREVTGEVGRCPACWDHMDA----PQVTGCGHTLCQECM 124
>gi|395856711|ref|XP_003800763.1| PREDICTED: E3 ubiquitin-protein ligase TRIM13 [Otolemur garnettii]
Length = 407
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
EE L CPIC F+ P VL C H CK C+ G+ +R +L PF CP C
Sbjct: 5 EEDLTCPICCSLFDD----PRVLPCSHNFCKKCLEGIFEGNVR-NSLWRPSPF--KCPTC 57
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMN 139
+ + Q NY L +VE N
Sbjct: 58 R----KETSATGVNSLQVNYSLKGIVEKYN 83
>gi|47216988|emb|CAG04930.1| unnamed protein product [Tetraodon nigroviridis]
Length = 179
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
Query: 49 REEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPW 108
R++ L C +C+ S+++ LP L CGH C+ C + RL T+ +I CP
Sbjct: 31 RKQDLVCIVCFGSYDLATRLPRRLHCGHAFCQAC-------LKRLDTV-INDQVWIPCPQ 82
Query: 109 CNMVSLR 115
C + R
Sbjct: 83 CRQNTPR 89
>gi|268577879|ref|XP_002643922.1| Hypothetical protein CBG17264 [Caenorhabditis briggsae]
Length = 314
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 36/81 (44%), Gaps = 17/81 (20%)
Query: 47 NSREEGLECPICWESFNVVENL-PYVLW-CGHTLCKNCV--LGLQRAVIRLPTLPFQLPF 102
++ EC IC SF E L P +L CGHTLC +C L LQ
Sbjct: 218 QDKQHSSECHIC--SFEYSEKLLPKILIECGHTLCADCAHNLSLQNG-----------KQ 264
Query: 103 FITCPWCNMVSLRLICKGNLK 123
F+ CP+C ++L NLK
Sbjct: 265 FVYCPYCRQITLTHGNASNLK 285
>gi|351714781|gb|EHB17700.1| Putative E3 ubiquitin-protein ligase SH3RF2 [Heterocephalus glaber]
Length = 732
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 20/98 (20%)
Query: 54 ECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVS 113
ECP+C+E +V VL C HT CK C+ + +A L CP C +
Sbjct: 11 ECPVCFEKLDVTAR---VLPCQHTFCKPCLQKIFKAHKEL-----------RCPECRTL- 55
Query: 114 LRLICKGNLKFPQKNYYLLWMVESM-NGDRSKSNPHFR 150
+ C +++ N L+ ++ESM +G RS FR
Sbjct: 56 --VFC--SIEALPANLLLVRLLESMRSGQRSWRGGSFR 89
>gi|193209612|ref|NP_001123114.1| Protein C28G1.5, isoform b [Caenorhabditis elegans]
gi|351049653|emb|CCD63334.1| Protein C28G1.5, isoform b [Caenorhabditis elegans]
Length = 302
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 16/86 (18%)
Query: 54 ECPICWESFNVV--ENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNM 111
+C IC++ F+ E++P L CGH LC C+ A++ T + CP+C
Sbjct: 5 KCKICFDRFSDTDSEHIPRNLTCGHALCHKCIT----AMVNNST--------VECPFCRT 52
Query: 112 VSLRLICKGNLKFPQKNYYLLWMVES 137
V+ I ++ KN+ L+ ++E
Sbjct: 53 VT--NIVNNDITKLLKNFALIEVIED 76
>gi|238570446|ref|XP_002386847.1| hypothetical protein MPER_14733 [Moniliophthora perniciosa FA553]
gi|215439978|gb|EEB87777.1| hypothetical protein MPER_14733 [Moniliophthora perniciosa FA553]
Length = 104
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 12/65 (18%)
Query: 23 RLKNDALKPSQVSSELSDDDASLNNSREEGLECPICWESF-NVVENLPYVLWCGHTLCKN 81
R K++ALK ++ +E +DA+L E +CPIC++ F + V P C H C+
Sbjct: 42 RFKHEALK--RIEAEKESEDAAL-----EDEDCPICYDVFTDAVVTAP----CAHVFCRE 90
Query: 82 CVLGL 86
C+ +
Sbjct: 91 CIFNV 95
>gi|48475186|gb|AAT44255.1| unknown protein [Oryza sativa Japonica Group]
gi|53980845|gb|AAV24766.1| unknown protein [Oryza sativa Japonica Group]
gi|215767233|dbj|BAG99461.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 721
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 54 ECPICWESFNVVENLPYVLWCGHTLCKNCV 83
ECP+C F+ P VL CGH+LC C+
Sbjct: 16 ECPVCLSPFDAASAAPRVLPCGHSLCGPCI 45
>gi|359320716|ref|XP_003639399.1| PREDICTED: LOW QUALITY PROTEIN: RING finger protein 183 [Canis
lupus familiaris]
Length = 190
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 19/33 (57%)
Query: 54 ECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
ECP+CW FN + P VL C H+ C C+ L
Sbjct: 10 ECPVCWNPFNNTFHTPKVLDCCHSFCVECLAHL 42
>gi|313244370|emb|CBY15173.1| unnamed protein product [Oikopleura dioica]
Length = 115
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
++ EC IC+E FN E VL CGH C C+ L
Sbjct: 58 QQRTECNICFEEFNSEERKESVLHCGHRSCYKCLAEL 94
>gi|440908450|gb|ELR58464.1| E3 ubiquitin-protein ligase TRIM50 [Bos grunniens mutus]
Length = 487
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
E+ L+CP+C E F P +L CGH+ CK C++ L
Sbjct: 11 EDRLQCPMCLEVFKE----PLMLQCGHSYCKGCLVSL 43
>gi|348566009|ref|XP_003468795.1| PREDICTED: E3 ubiquitin-protein ligase RNF182-like [Cavia
porcellus]
Length = 247
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 34 VSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCV 83
++S+L +D A S E LEC IC+ +N+ + P VL C H +C C+
Sbjct: 1 MASQLPEDPAEAQVSDE--LECKICYNRYNLKQRKPKVLECCHRVCAKCL 48
>gi|147836207|emb|CAN73176.1| hypothetical protein VITISV_007720 [Vitis vinifera]
Length = 1662
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 12/83 (14%)
Query: 55 CPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSL 114
C +C +N E +P +L CGH CK C L R P ++CP C VS
Sbjct: 6 CLVCQTRYNEEERVPLLLQCGHGFCKEC---LSRLFSASPDTN------LSCPRCRHVS- 55
Query: 115 RLICKGNLKFPQKNYYLLWMVES 137
+++ +KNY +L +++S
Sbjct: 56 --SVGNSVQALRKNYGVLALIQS 76
>gi|313212102|emb|CBY16131.1| unnamed protein product [Oikopleura dioica]
Length = 75
Score = 37.7 bits (86), Expect = 5.3, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 54 ECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPF 102
+CPIC+ F+ + CGH LC C+ G+ R + + PF
Sbjct: 3 DCPICYNKFDRQHKWELAIRCGHRLCLECLTGIIREADTTTSTELKCPF 51
>gi|158286254|ref|XP_308645.4| AGAP007114-PA [Anopheles gambiae str. PEST]
gi|157020380|gb|EAA04070.5| AGAP007114-PA [Anopheles gambiae str. PEST]
Length = 1405
Score = 37.7 bits (86), Expect = 5.3, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQ 87
E L CP+C F P L CGHT+C+ C+ L
Sbjct: 10 EFLSCPVCCNEFAANLRPPISLGCGHTICRTCLATLH 46
>gi|329664640|ref|NP_001193185.1| E3 ubiquitin-protein ligase TRIM50 [Bos taurus]
gi|296473068|tpg|DAA15183.1| TPA: tripartite motif protein 50A-like [Bos taurus]
Length = 487
Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
E+ L+CP+C E F P +L CGH+ CK C++ L
Sbjct: 11 EDRLQCPMCLEVFKE----PLMLQCGHSYCKGCLVSL 43
>gi|301613881|ref|XP_002936431.1| PREDICTED: RING finger protein 183-like [Xenopus (Silurana)
tropicalis]
Length = 211
Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 8/71 (11%)
Query: 41 DDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQL 100
D A +SR LEC IC+ ++ + P +L C HTLC CV R V LP P +
Sbjct: 13 DTAEDPDSR---LECSICFTKYDNIFKTPKLLQCSHTLCLECV---ARLVAALP--PEKQ 64
Query: 101 PFFITCPWCNM 111
+ CP+C
Sbjct: 65 AEDVLCPFCRQ 75
>gi|302792711|ref|XP_002978121.1| hypothetical protein SELMODRAFT_108223 [Selaginella moellendorffii]
gi|300154142|gb|EFJ20778.1| hypothetical protein SELMODRAFT_108223 [Selaginella moellendorffii]
Length = 401
Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 6/85 (7%)
Query: 25 KNDALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVL 84
+ A + V++ ++DDD L C IC+E +E + CGH +C +C+L
Sbjct: 308 RKSATESEIVNAIMTDDDQQLEQVSNSNSCCCICFEHRCNIE----LHKCGHQMCASCIL 363
Query: 85 GLQRAVIRLPTLPFQLPFFITCPWC 109
L P +PF P CP+C
Sbjct: 364 TLCCHNKPNPAIPFSPP--PGCPFC 386
>gi|432921132|ref|XP_004080041.1| PREDICTED: E3 ubiquitin-protein ligase TRIM39-like [Oryzias
latipes]
Length = 644
Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
Query: 43 ASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLG 85
A+ N EE + C IC + F ++P CGH C+NC+LG
Sbjct: 2 AATGNLSEEQVHCSICLDVFTNPVSIP----CGHNFCQNCILG 40
>gi|298160964|ref|NP_001177157.1| RING finger protein 224 [Homo sapiens]
gi|342179218|sp|P0DH78.1|RN224_HUMAN RecName: Full=RING finger protein 224
Length = 156
Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCV 83
EE +C IC ++++ +LP L+CGHT C+ CV
Sbjct: 19 EERTDCIICCSAYDLSGHLPRRLYCGHTFCQACV 52
>gi|341895829|gb|EGT51764.1| hypothetical protein CAEBREN_14803 [Caenorhabditis brenneri]
Length = 591
Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Query: 53 LECPICWESFNVVE-NLPYVLW-CGHTLCKNCVLGL 86
ECPIC+E+F P VL CGHTLC +CVL +
Sbjct: 128 FECPICFETFTEQGGQTPIVLGKCGHTLCFDCVLKI 163
>gi|149730297|ref|XP_001488625.1| PREDICTED: e3 ubiquitin-protein ligase TRIM13 [Equus caballus]
Length = 407
Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
EE L CPIC F+ P VL C H CK C+ G+ +R +L PF CP C
Sbjct: 5 EEDLTCPICCSLFDD----PRVLPCSHNFCKKCLEGILEGNVR-NSLWRLSPF--KCPTC 57
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMN 139
+ + Q NY L +VE N
Sbjct: 58 R----KETSATGVNSLQVNYSLKGIVEKYN 83
>gi|225465817|ref|XP_002263469.1| PREDICTED: E3 ubiquitin-protein ligase KEG [Vitis vinifera]
gi|296087851|emb|CBI35107.3| unnamed protein product [Vitis vinifera]
Length = 1631
Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 12/83 (14%)
Query: 55 CPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSL 114
C +C +N E +P +L CGH CK C L R P ++CP C VS
Sbjct: 6 CLVCQTRYNEEERVPLLLQCGHGFCKEC---LSRLFSASPDT------NLSCPRCRHVS- 55
Query: 115 RLICKGNLKFPQKNYYLLWMVES 137
+++ +KNY +L +++S
Sbjct: 56 --SVGNSVQALRKNYGVLALIQS 76
>gi|365222888|gb|AEW69796.1| Hop-interacting protein THI033 [Solanum lycopersicum]
Length = 447
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 12/89 (13%)
Query: 31 PSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAV 90
P+ +E+ D+ + +N + C IC++ ++ V CGH +C +CVL L
Sbjct: 301 PTNSDNEMDDNISEVNETEI----CCICFDQVCTIQ----VQDCGHQMCAHCVLAL--CC 350
Query: 91 IRLPTLPFQLPFFITCPWC--NMVSLRLI 117
+ P P CP+C N+V L +I
Sbjct: 351 HKKPNPTTTSPIVPVCPFCRSNIVQLDVI 379
>gi|403331926|gb|EJY64939.1| hypothetical protein OXYTRI_14913 [Oxytricha trifallax]
Length = 176
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Query: 52 GLE-CPICWESFNVVENLPYVL-WCGHTLCKNCVLGL-QRAVIRLP 94
GL+ C C +NV E +P +L CGHTLC NC+ L + +R P
Sbjct: 12 GLDICQFCGLKYNVGERIPRILVHCGHTLCTNCIQQLHHKNRVRCP 57
>gi|351705363|gb|EHB08282.1| E3 ubiquitin-protein ligase TRIM50 [Heterocephalus glaber]
Length = 451
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
++ L+CPIC E F P +L CGH+ CK C++ L
Sbjct: 11 QDQLQCPICLEVFKE----PLMLQCGHSYCKGCLVSL 43
>gi|193575609|ref|XP_001952583.1| PREDICTED: e3 ubiquitin-protein ligase TRIM23-like [Acyrthosiphon
pisum]
Length = 573
Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 48 SREEGLECPICWESFNVV-ENLPYVLWCGHTLCKNCVLGL 86
+ + LEC +C + F + + +P +L+CGHT+C +C+L L
Sbjct: 21 DKSDVLECRVCEDIFTLQGDKVPRLLYCGHTICHSCLLRL 60
>gi|410978879|ref|XP_003995815.1| PREDICTED: RING finger protein 183 [Felis catus]
Length = 190
Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 19/33 (57%)
Query: 54 ECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
ECP+CW FN + P VL C H+ C C+ L
Sbjct: 10 ECPVCWNPFNNTFHTPKVLDCCHSFCVECLAHL 42
>gi|409083582|gb|EKM83939.1| hypothetical protein AGABI1DRAFT_67033 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1106
Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Query: 46 NNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVL 84
N + E+ ECPIC F+V+E +L C H CK+C+L
Sbjct: 836 NLADEDITECPIC---FDVMEVPTMILGCAHQCCKDCIL 871
>gi|291223217|ref|XP_002731607.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 730
Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 65/145 (44%), Gaps = 29/145 (20%)
Query: 49 REEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLG-LQRAVIRLPTLPFQLPFFITCP 107
R++ L C +C E+F P VL C HT C++C+ ++ + +L TCP
Sbjct: 13 RDDMLTCSLCLETFKT----PKVLPCLHTFCEHCLESWVEESTGKL-----------TCP 57
Query: 108 WCNMVSLRLICKGNLKFPQKNYYLLWMVE--SMNGDRSKSNPHFRGDHQPASSLNRNSAV 165
C + N++ Q N+ L+ + + S D +K + P + ++ +AV
Sbjct: 58 LCRFE----VPDNNIQALQTNFILVGLSDYISTVKDIAKQDG-------PCGACDQGTAV 106
Query: 166 RNQVSHAHNGRATCSHVSRQSEIRR 190
V + N TC+ V R+ ++ +
Sbjct: 107 TRCVECSQNLCKTCTDVHRKLKVTQ 131
>gi|156331984|ref|XP_001619224.1| hypothetical protein NEMVEDRAFT_v1g152025 [Nematostella vectensis]
gi|156201997|gb|EDO27124.1| predicted protein [Nematostella vectensis]
Length = 270
Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 31/72 (43%), Gaps = 12/72 (16%)
Query: 41 DDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQL 100
D ++ ++ +ECPIC E F P VL C HT C C++GL P
Sbjct: 2 DKTNIVERLQKEVECPICLERFKD----PRVLPCLHTFCYECLVGLASRYKTEGKWP--- 54
Query: 101 PFFITCPWCNMV 112
CP C MV
Sbjct: 55 -----CPQCKMV 61
>gi|426219677|ref|XP_004004045.1| PREDICTED: LOW QUALITY PROTEIN: RING finger protein 183 [Ovis
aries]
Length = 179
Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 54 ECPICWESFNVVENLPYVLWCGHTLCKNCV 83
ECP+CW FN + P VL C H+ C C+
Sbjct: 10 ECPVCWNPFNNTFHTPKVLDCCHSFCVECL 39
>gi|71896955|ref|NP_001026491.1| tripartite motif-containing protein 59 [Gallus gallus]
gi|82197903|sp|Q5ZMD4.1|TRI59_CHICK RecName: Full=Tripartite motif-containing protein 59
gi|53127452|emb|CAG31109.1| hypothetical protein RCJMB04_2h17 [Gallus gallus]
Length = 408
Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 21/110 (19%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPT-----LPFQLPFFI 104
EE L C IC+ F P VL C HT C++C+ G VI+L + P ++P +
Sbjct: 5 EEELTCSICYSLFED----PRVLPCSHTFCRSCLEG----VIQLSSNFSIWRPLRVP--L 54
Query: 105 TCPWCNMVSLRLICKGNLKFPQKNYYLLWMVESM----NGDRSKSNPHFR 150
CP C + + + G P N+ L ++E + D + + H+R
Sbjct: 55 KCPNCRSI-VEIPASGTESLPI-NFALKAIIEKYRQEDHSDVATCSEHYR 102
>gi|444720557|gb|ELW61339.1| E3 ubiquitin-protein ligase TRIM50 [Tupaia chinensis]
Length = 486
Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
++ L+CPIC E F P +L CGH+ CK C++ L
Sbjct: 11 QDQLQCPICLEVFKE----PLMLQCGHSYCKGCLVSL 43
>gi|326930174|ref|XP_003211226.1| PREDICTED: RING finger protein 208-like [Meleagris gallopavo]
Length = 309
Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 8/64 (12%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
E LECP C +N P +L C H++C+ C+ L + + FI+CP C
Sbjct: 188 EPLECPTCGHMYNFTNKRPRILSCLHSVCEECLQILYESCPKY--------KFISCPTCK 239
Query: 111 MVSL 114
++
Sbjct: 240 RETV 243
>gi|296474021|tpg|DAA16136.1| TPA: ring finger protein 182 [Bos taurus]
Length = 249
Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 9/76 (11%)
Query: 34 VSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRL 93
++S+L ++ A S E LEC IC+ +N+ + P VL C H +C C+ +I
Sbjct: 1 MASQLPEEAAKSQVSDE--LECKICYNRYNLKQRKPKVLGCCHRVCAKCLC----KIINF 54
Query: 94 PTLPFQLPFFITCPWC 109
P + I CP+C
Sbjct: 55 GDTPHGV---IVCPFC 67
>gi|12407427|gb|AAG53502.1|AF220129_1 tripartite motif protein TRIM13 [Mus musculus]
Length = 134
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
EE L CPIC F+ P VL C H CK C+ GL +R +L PF CP C
Sbjct: 5 EEDLTCPICCSLFDD----PRVLPCSHNFCKKCLEGLLEGNVR-NSLWRPSPF--KCPTC 57
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMN 139
+ + Q NY L +VE N
Sbjct: 58 R----KETSATGVNSLQVNYSLKGIVEKYN 83
>gi|17539210|ref|NP_500203.1| Protein C45G7.4 [Caenorhabditis elegans]
gi|351058164|emb|CCD65532.1| Protein C45G7.4 [Caenorhabditis elegans]
Length = 603
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 10/86 (11%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMV 112
+ C +C+E FN P +L CGH C++C+ L + L I CP C
Sbjct: 22 ITCEVCFEVFNHENRPPKLLPCGHNFCESCIFSL------CLHQEYYLLDSIKCPTCR-- 73
Query: 113 SLRLICKGNLKFPQKNYYLLWMVESM 138
R + NY L ++E++
Sbjct: 74 --REFTTNTARQAPTNYDLCKILENL 97
>gi|403341378|gb|EJY69994.1| Zinc finger protein [Oxytricha trifallax]
Length = 278
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 55 CPICWESFNVVENLPYVLW-CGHTLCKNCV 83
CPIC+E F N P++L+ CGHT CK C+
Sbjct: 43 CPICFELFLPPINQPFILFPCGHTFCKICI 72
>gi|357119993|ref|XP_003561716.1| PREDICTED: probable E3 ubiquitin-protein ligase BAH1-like 1-like
[Brachypodium distachyon]
Length = 340
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 12/68 (17%)
Query: 50 EEGLECPICWES-FNVVENLPYVLWCGHTLCKNCVLGLQRAVI--RLPTLPFQLPFFITC 106
E L CPIC ++ FN PY L CGH CK C G I + T P + C
Sbjct: 231 EYSLTCPICLDTLFN-----PYALSCGHLFCKGCACGAASVYIFQGVKTAPPEAK----C 281
Query: 107 PWCNMVSL 114
P C V +
Sbjct: 282 PVCRAVGV 289
>gi|317418624|emb|CBN80662.1| Uncharacterized protein [Dicentrarchus labrax]
Length = 467
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 9/80 (11%)
Query: 45 LNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLG--LQRAVIRLPTLPFQLPF 102
+++ E+ L CP+C + F P VL C H+ CK+CV ++ + P L ++P
Sbjct: 1 MSSHSEKNLSCPVCQDIFKD----PVVLSCSHSFCKDCVQTWWTEKPIKECP-LCKKIP- 54
Query: 103 FITCPWCNMVSLRLICKGNL 122
++ P CN+V L+ +C+ L
Sbjct: 55 LLSDPPCNLV-LKNLCEAFL 73
>gi|449450716|ref|XP_004143108.1| PREDICTED: putative E3 ubiquitin-protein ligase XBAT31-like
[Cucumis sativus]
gi|449508126|ref|XP_004163227.1| PREDICTED: putative E3 ubiquitin-protein ligase XBAT31-like
[Cucumis sativus]
Length = 447
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 35/82 (42%), Gaps = 15/82 (18%)
Query: 36 SELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPT 95
SE+SD+D L C IC+E + +E V CGH +C C L L PT
Sbjct: 312 SEISDEDTEL---------CSICFEQASTIE----VQNCGHVMCAQCTLSLCCHSKPNPT 358
Query: 96 LPFQLPFFITCPWCNMVSLRLI 117
P CP+C L L+
Sbjct: 359 TACLTP--PVCPFCRSNILHLV 378
>gi|222631641|gb|EEE63773.1| hypothetical protein OsJ_18594 [Oryza sativa Japonica Group]
Length = 860
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 54 ECPICWESFNVVENLPYVLWCGHTLCKNCV 83
ECP+C F+ P VL CGH+LC C+
Sbjct: 16 ECPVCLSPFDAASAAPRVLPCGHSLCGPCI 45
>gi|195113715|ref|XP_002001413.1| GI21991 [Drosophila mojavensis]
gi|193918007|gb|EDW16874.1| GI21991 [Drosophila mojavensis]
Length = 294
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 42 DASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCV 83
D ++S E +CP+C E E PY CGH CK+C+
Sbjct: 228 DLDKSDSFREAYKCPVCLECVRTRE--PYSTKCGHIFCKHCI 267
>gi|341890318|gb|EGT46253.1| hypothetical protein CAEBREN_16338 [Caenorhabditis brenneri]
Length = 350
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 14/95 (14%)
Query: 74 CGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYLLW 133
CGHT C+ C++ L + FI CP C++ + + KG ++ KNY LL+
Sbjct: 264 CGHTFCEQCLVELAK---------LNKNEFIICPTCSVKT--PVRKGTIEQFPKNYPLLY 312
Query: 134 MVESMNGDRSKSNPHFRGDHQPASSLNRNSAVRNQ 168
++ +N D+ H D S+++ + +Q
Sbjct: 313 IIRKVNRDKEL---HLWMDTISGRSIDKEKMLGSQ 344
>gi|335280804|ref|XP_003353662.1| PREDICTED: RING finger protein 183-like isoform 1 [Sus scrofa]
Length = 190
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 19/33 (57%)
Query: 54 ECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
ECP+CW FN + P VL C H+ C C+ L
Sbjct: 10 ECPVCWNPFNNTFHTPKVLDCCHSFCVECLAHL 42
>gi|308457971|ref|XP_003091342.1| hypothetical protein CRE_22710 [Caenorhabditis remanei]
gi|308257202|gb|EFP01155.1| hypothetical protein CRE_22710 [Caenorhabditis remanei]
Length = 208
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 49 REEGLECPICWESFNVVENLPYVLWCGHTLCKNCV 83
REE C +C + ++ N+P V+ CGH C NC+
Sbjct: 124 REESRICQLCLQEYSHEANIPKVIACGHICCHNCL 158
>gi|302766401|ref|XP_002966621.1| hypothetical protein SELMODRAFT_86281 [Selaginella moellendorffii]
gi|300166041|gb|EFJ32648.1| hypothetical protein SELMODRAFT_86281 [Selaginella moellendorffii]
Length = 400
Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 25 KNDALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVL 84
+ A + V++ ++DDD L + + C IC+E +E + CGH +C +C+L
Sbjct: 308 RKSAAESEIVNAIMTDDDQQLEQASTDSC-CCICFEHRCNIE----LHKCGHQMCASCIL 362
Query: 85 GLQRAVIRLPTLPFQLPFFITCPWC 109
L P +PF P CP+C
Sbjct: 363 TLCCHNKPNPAMPFSPP--PACPFC 385
>gi|390353094|ref|XP_003728033.1| PREDICTED: uncharacterized protein LOC100892566
[Strongylocentrotus purpuratus]
Length = 678
Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 4/31 (12%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCV 83
L CP+C E+F P +L CGHT CK+C+
Sbjct: 13 LACPLCLEAFKS----PTLLQCGHTFCKDCL 39
>gi|118150974|ref|NP_001071406.1| E3 ubiquitin-protein ligase RNF182 [Bos taurus]
gi|115305358|gb|AAI23594.1| Ring finger protein 182 [Bos taurus]
Length = 249
Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 9/76 (11%)
Query: 34 VSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRL 93
++S+L ++ A S E LEC IC+ +N+ + P VL C H +C C+ +I
Sbjct: 1 MASQLPEEAAESQVSDE--LECKICYNRYNLKQRKPKVLGCCHRVCAKCLC----KIINF 54
Query: 94 PTLPFQLPFFITCPWC 109
P + I CP+C
Sbjct: 55 GDTPHGV---IVCPFC 67
>gi|348568674|ref|XP_003470123.1| PREDICTED: E3 ubiquitin-protein ligase TRIM50-like [Cavia
porcellus]
Length = 490
Score = 37.7 bits (86), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
++ L+CPIC E F P +L CGH+ CK C++ L
Sbjct: 11 QDQLQCPICLEVFKE----PLMLQCGHSYCKGCLVSL 43
>gi|321464383|gb|EFX75391.1| hypothetical protein DAPPUDRAFT_323297 [Daphnia pulex]
Length = 1007
Score = 37.7 bits (86), Expect = 6.3, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 43 ASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNC 82
+SLN+S EE ECP+C E + + Y CG+ +C+ C
Sbjct: 2 SSLNHSGEESSECPLCMEPLEMDDLSFYPCTCGYQICRFC 41
>gi|322799316|gb|EFZ20704.1| hypothetical protein SINV_06176 [Solenopsis invicta]
Length = 522
Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 9/57 (15%)
Query: 53 LECPICWESFNVVE-NLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPW 108
LEC +C E F V +P +L CGHT+C +C+L RL T + F + CP+
Sbjct: 25 LECRVCEEVFTVDGVKVPRLLHCGHTVCHSCLL-------RLRTCMSEQQFLL-CPF 73
>gi|301791023|ref|XP_002930511.1| PREDICTED: tripartite motif-containing protein 59-like [Ailuropoda
melanoleuca]
Length = 403
Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPT-LPFQLPFFITCPW 108
E+ L CPIC+ F P VL C HT C+NC+ + +A P ++P + CP
Sbjct: 5 EDELTCPICYSIFED----PRVLPCSHTFCRNCLENVLQASGNFYIWRPLRIP--LKCPS 58
Query: 109 CNMV 112
C +
Sbjct: 59 CRSI 62
>gi|62529022|gb|AAX84806.1| TRIM50 [Gorilla gorilla]
Length = 102
Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 23/94 (24%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
E+ L+CPIC E F P +L CGH+ CK C L +L + L + CP C
Sbjct: 11 EDRLQCPICLEVFKE----PLMLQCGHSYCKGC----------LGSLSYHLDTKLRCPMC 56
Query: 110 NMVSLRLICKGNLKFPQKNYYLLWMVESMN--GD 141
V G+ P N L W++E++ GD
Sbjct: 57 WQVV-----DGSSSPP--NVSLAWVIEALRLPGD 83
>gi|281341327|gb|EFB16911.1| hypothetical protein PANDA_020982 [Ailuropoda melanoleuca]
Length = 402
Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPT-LPFQLPFFITCPW 108
E+ L CPIC+ F P VL C HT C+NC+ + +A P ++P + CP
Sbjct: 5 EDELTCPICYSIFED----PRVLPCSHTFCRNCLENVLQASGNFYIWRPLRIP--LKCPS 58
Query: 109 CNMV 112
C +
Sbjct: 59 CRSI 62
>gi|260792746|ref|XP_002591375.1| hypothetical protein BRAFLDRAFT_227502 [Branchiostoma floridae]
gi|229276580|gb|EEN47386.1| hypothetical protein BRAFLDRAFT_227502 [Branchiostoma floridae]
Length = 550
Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Query: 53 LECPICWESFNVV-ENLPYVLWCGHTLCKNCV--LGLQRAVIRLP 94
LEC +C + F + + +P +L CGHTLC +C+ L L IR P
Sbjct: 4 LECGVCEDVFGLQGDKVPRLLLCGHTLCHDCLTRLPLHGRAIRCP 48
>gi|348543327|ref|XP_003459135.1| PREDICTED: E3 ubiquitin-protein ligase RNF182-like [Oreochromis
niloticus]
Length = 252
Score = 37.4 bits (85), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCN 110
E +EC IC+ ++N+ P VL C H LC C +I++ L P + CP+C
Sbjct: 23 EEMECKICYCAYNLGSRRPKVLECCHRLCSKC-------LIKILDLGESPPNALVCPFCR 75
Query: 111 MVS 113
++
Sbjct: 76 YLT 78
>gi|402586212|gb|EJW80150.1| WWE domain-containing protein [Wuchereria bancrofti]
Length = 221
Score = 37.4 bits (85), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 6/58 (10%)
Query: 32 SQVSSELSDDDASL---NNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGL 86
+V + D D SL + + E ECPIC++ F LP CGHT C C+ G+
Sbjct: 10 EEVERPIVDVDDSLRQDKSEKSEKDECPICYQEFAYKTELPD---CGHTFCFLCIKGV 64
>gi|218196826|gb|EEC79253.1| hypothetical protein OsI_20016 [Oryza sativa Indica Group]
Length = 824
Score = 37.4 bits (85), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 54 ECPICWESFNVVENLPYVLWCGHTLCKNCV 83
ECP+C F+ P VL CGH+LC C+
Sbjct: 16 ECPVCLSPFDAASAAPRVLPCGHSLCGPCI 45
>gi|432887960|ref|XP_004074997.1| PREDICTED: RING finger protein 208-like [Oryzias latipes]
Length = 259
Score = 37.4 bits (85), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 8/59 (13%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
E L+CP C ++N P +L C H++C+ C+ L + + FI+CP C
Sbjct: 140 EPLDCPTCGHTYNFAGKRPRILSCLHSVCEECLQILYESCPKY--------KFISCPTC 190
>gi|348513811|ref|XP_003444435.1| PREDICTED: RING finger protein 208-like [Oreochromis niloticus]
Length = 258
Score = 37.4 bits (85), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 8/59 (13%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
E L+CP C ++N P +L C H++C+ C+ L + + FI+CP C
Sbjct: 139 EPLDCPTCGHTYNFAGKRPRILSCLHSVCEECLQILYESCPKY--------KFISCPTC 189
>gi|122692451|ref|NP_001073779.1| tripartite motif-containing protein 59 [Bos taurus]
gi|86437977|gb|AAI12617.1| Hypothetical LOC540154 [Bos taurus]
Length = 361
Score = 37.4 bits (85), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPT-LPFQLPFFITCPW 108
E+ L CPIC+ F P VL C HT C+NC+ + +A P ++P + CP
Sbjct: 5 EDELTCPICYSIFED----PRVLPCSHTFCRNCLENVLQATGNFYIWRPLRIP--LKCPN 58
Query: 109 CNMV 112
C +
Sbjct: 59 CRSI 62
>gi|78369200|ref|NP_001030499.1| RING finger protein 183 [Bos taurus]
gi|110816411|sp|Q3SWY0.1|RN183_BOVIN RecName: Full=RING finger protein 183
gi|74356389|gb|AAI04612.1| Ring finger protein 183 [Bos taurus]
gi|296484356|tpg|DAA26471.1| TPA: ring finger protein 183 [Bos taurus]
Length = 188
Score = 37.4 bits (85), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 54 ECPICWESFNVVENLPYVLWCGHTLCKNCV 83
ECP+CW FN + P VL C H+ C C+
Sbjct: 10 ECPVCWNPFNNTFHTPKVLDCCHSFCVECL 39
>gi|341899173|gb|EGT55108.1| hypothetical protein CAEBREN_12513 [Caenorhabditis brenneri]
Length = 350
Score = 37.4 bits (85), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 11/57 (19%)
Query: 54 ECPICWESFNVVENLPYVL-WCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
EC IC+ F+ +PYVL CGHT+C+ C L + Q +F+ CP+C
Sbjct: 270 ECKICFSEFHN-HRVPYVLKECGHTICEICSYKLLQK---------QEQYFVICPFC 316
>gi|260808159|ref|XP_002598875.1| hypothetical protein BRAFLDRAFT_90099 [Branchiostoma floridae]
gi|229284150|gb|EEN54887.1| hypothetical protein BRAFLDRAFT_90099 [Branchiostoma floridae]
Length = 564
Score = 37.4 bits (85), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 42/97 (43%), Gaps = 15/97 (15%)
Query: 43 ASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPF 102
+SL E L C IC E F P VL C HT C++C+ G+ A +P
Sbjct: 6 SSLGTDFREELTCSICLELFT----RPKVLPCMHTFCQDCLQGINVARREMP-------- 53
Query: 103 FITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVESMN 139
CP C+ ++L +G P N+ + + E +
Sbjct: 54 -FKCPLCHR-QVKLPPQGVEGLPD-NHLITTLCERLQ 87
>gi|440900361|gb|ELR51514.1| RING finger protein 183 [Bos grunniens mutus]
Length = 188
Score = 37.4 bits (85), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 54 ECPICWESFNVVENLPYVLWCGHTLCKNCV 83
ECP+CW FN + P VL C H+ C C+
Sbjct: 10 ECPVCWNPFNNTFHTPKVLDCCHSFCVECL 39
>gi|405965350|gb|EKC30731.1| Tripartite motif-containing protein 56 [Crassostrea gigas]
Length = 482
Score = 37.4 bits (85), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 41 DDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQR 88
+D + RE L+CPIC + + P +L C HT+C NC+L R
Sbjct: 41 EDEKIERLRERILQCPICIDEYKD----PRILPCHHTVCLNCLLDYVR 84
>gi|410904313|ref|XP_003965636.1| PREDICTED: RING finger protein 208-like [Takifugu rubripes]
Length = 262
Score = 37.4 bits (85), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 8/59 (13%)
Query: 51 EGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
E L+CP C ++N P +L C H++C+ C+ L + + FI+CP C
Sbjct: 143 EPLDCPTCGHTYNFTGKRPRILSCLHSVCEECLQILYESCPKY--------KFISCPTC 193
>gi|397630184|gb|EJK69673.1| hypothetical protein THAOC_09045 [Thalassiosira oceanica]
Length = 837
Score = 37.4 bits (85), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Query: 31 PSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRA 89
P ++ +E+ D++ +N E CPIC +N P L+CGH C C+ R+
Sbjct: 397 PCRIRNEILDEE---DNYTEPNTTCPICLTEMEPGDN-PVTLYCGHRFCVGCIKDYGRS 451
>gi|335299840|ref|XP_003358702.1| PREDICTED: tripartite motif-containing protein 59 isoform 2 [Sus
scrofa]
gi|335299842|ref|XP_001925596.3| PREDICTED: tripartite motif-containing protein 59 isoform 1 [Sus
scrofa]
Length = 403
Score = 37.4 bits (85), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPT-LPFQLPFFITCPW 108
E+ L CPIC+ F P VL C HT C+NC+ + +A P ++P + CP
Sbjct: 5 EDELTCPICYSIFED----PRVLPCSHTFCRNCLEDILQASGNFYIWRPLRIP--LKCPN 58
Query: 109 CNMV 112
C +
Sbjct: 59 CRSI 62
>gi|26352916|dbj|BAC40088.1| unnamed protein product [Mus musculus]
Length = 381
Score = 37.4 bits (85), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGL--QRAVIRLP 94
LECP+C E + VL C HT CK C+LG+ R +R P
Sbjct: 10 LECPVCLERLDASAK---VLPCQHTFCKRCLLGIVGSRNELRCP 50
>gi|118380976|ref|XP_001023650.1| zinc finger protein [Tetrahymena thermophila]
gi|89305417|gb|EAS03405.1| zinc finger protein [Tetrahymena thermophila SB210]
Length = 359
Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 13/60 (21%)
Query: 51 EGLECPICWESFNVVENLPYVLW-CGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
E CPIC+E N P +++ CGHT CK C+ +P CP+C
Sbjct: 131 ENCTCPICYELMVPPNNSPILIFPCGHTFCKTCI------------IPKDKTKLNKCPFC 178
>gi|157822147|ref|NP_001102415.1| tripartite motif-containing protein 59 [Rattus norvegicus]
gi|149048334|gb|EDM00910.1| rCG63400 [Rattus norvegicus]
gi|197245953|gb|AAI68884.1| Tripartite motif-containing 59 [Rattus norvegicus]
Length = 403
Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPT-LPFQLPFFITCPW 108
E+ L CPIC+ F+ P VL C HT C+NC+ + +A P ++P + CP
Sbjct: 5 EDELTCPICYSIFDD----PRVLPCSHTFCRNCLENVLQASGNFYIWRPLRIP--LKCPN 58
Query: 109 CNMV 112
C +
Sbjct: 59 CRSI 62
>gi|66910716|gb|AAH97589.1| LOC443659 protein, partial [Xenopus laevis]
Length = 218
Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 45/110 (40%), Gaps = 22/110 (20%)
Query: 32 SQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVL-----GL 86
S +SSE + L N ECP+C+E F V L C H+ C +C++
Sbjct: 7 SAMSSEEGGKETPLPN------ECPVCYEQFQVPNTSERRLSCSHSFCHDCLVKYLLTAK 60
Query: 87 QRAVIRLPTLPFQLPFFITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVE 136
Q ++ I CP C V+ + K + P K+ L ++E
Sbjct: 61 QEGSVKK---------NIICPLCRYVT--FLSKRGIILPPKSGELHQILE 99
>gi|426218032|ref|XP_004003254.1| PREDICTED: tripartite motif-containing protein 59 [Ovis aries]
Length = 404
Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPT-LPFQLPFFITCPW 108
E+ L CPIC+ F P VL C HT C+NC+ + +A P ++P + CP
Sbjct: 7 EDELTCPICYSIFED----PRVLPCSHTFCRNCLENVLQATGNFYIWRPLRIP--LKCPN 60
Query: 109 CNMV 112
C +
Sbjct: 61 CRSI 64
>gi|301622927|ref|XP_002940778.1| PREDICTED: RING finger protein 183-like [Xenopus (Silurana)
tropicalis]
Length = 178
Score = 37.4 bits (85), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 10/60 (16%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWC 109
+ +CP+CW +N P +L C H C C+ L +A P I CP C
Sbjct: 8 DPDWDCPVCWNPYNPTSRTPKLLHCNHCFCLECLERLSQAS----------PMRIPCPLC 57
>gi|296491141|tpg|DAA33214.1| TPA: tripartite motif-containing 59 [Bos taurus]
Length = 362
Score = 37.4 bits (85), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPT-LPFQLPFFITCPW 108
E+ L CPIC+ F P VL C HT C+NC+ + +A P ++P + CP
Sbjct: 5 EDELTCPICYSIFED----PRVLPCSHTFCRNCLENVLQATGNFYIWRPLRIP--LKCPN 58
Query: 109 CNMV 112
C +
Sbjct: 59 CRSI 62
>gi|260808706|ref|XP_002599148.1| hypothetical protein BRAFLDRAFT_81815 [Branchiostoma floridae]
gi|229284424|gb|EEN55160.1| hypothetical protein BRAFLDRAFT_81815 [Branchiostoma floridae]
Length = 610
Score = 37.4 bits (85), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 36/83 (43%), Gaps = 16/83 (19%)
Query: 43 ASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPF 102
+SL E L C IC E F P VL C HT C+ C LQ+ + TL
Sbjct: 6 SSLGEQIREELSCIICLELFT----RPKVLPCQHTFCQEC---LQQLAGKKKTLE----- 53
Query: 103 FITCPWCNMVSLRLICKGNLKFP 125
CP C + +RL KG + P
Sbjct: 54 ---CPTCRL-QVRLPSKGVIGLP 72
>gi|426244497|ref|XP_004016058.1| PREDICTED: tripartite motif-containing protein 59-like [Ovis aries]
Length = 402
Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPT-LPFQLPFFITCPW 108
E+ L CPIC+ F P VL C HT C+NC+ + +A P ++P + CP
Sbjct: 5 EDELTCPICYSIFED----PRVLPCSHTFCRNCLENVLQATGNFYIWRPLRIP--LKCPN 58
Query: 109 CNMV 112
C +
Sbjct: 59 CRSI 62
>gi|410902579|ref|XP_003964771.1| PREDICTED: RING finger protein 222-like [Takifugu rubripes]
Length = 203
Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Query: 46 NNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVL 84
+S+E+ ECP+C+E + E L CGH C +C++
Sbjct: 6 QDSQEDARECPVCYECLSGTER---TLCCGHVFCHDCLV 41
>gi|321471398|gb|EFX82371.1| hypothetical protein DAPPUDRAFT_302631 [Daphnia pulex]
Length = 342
Score = 37.4 bits (85), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 43/104 (41%), Gaps = 13/104 (12%)
Query: 44 SLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFF 103
++N EE + C IC F+ P L C HT+C C Q A R
Sbjct: 5 NVNTLDEEFITCQICLYEFDEENKKPKFLQCSHTICLEC---FQAARQRDT--------- 52
Query: 104 ITCPWCNMVSLRLICKGNLKFPQKNYYLLWMVESMNGDRSKSNP 147
ITCP+C + + G N Y+L M+ +N +S S P
Sbjct: 53 ITCPFCRTCTSKDNNNGAEWNLPTNRYVLEMIR-VNRAQSNSVP 95
>gi|432884694|ref|XP_004074544.1| PREDICTED: E3 ubiquitin-protein ligase TRIM23-like [Oryzias
latipes]
Length = 578
Score = 37.4 bits (85), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 15/103 (14%)
Query: 46 NNSREEGLECPICWESFNVV-ENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFI 104
N S + LEC +C + F++ + +P +L CGHT+C +C L LP +
Sbjct: 26 NGSTVKVLECGVCEDVFSLQGDKVPRLLLCGHTVCHDC----------LTRLPLH-GRAV 74
Query: 105 TCPWCNMVSLRLICKGNLKFPQKNYYLLWMVESM-NGDRSKSN 146
CP+ V+ + + +KN+ LL ++E + NG ++S
Sbjct: 75 RCPFDRQVT--ELGDSGVWGLKKNFALLELLERLQNGATNQSG 115
>gi|348528819|ref|XP_003451913.1| PREDICTED: zinc-binding protein A33-like [Oreochromis niloticus]
Length = 475
Score = 37.4 bits (85), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 57/127 (44%), Gaps = 25/127 (19%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPF--QLPFFITCP 107
E+ L CPIC++ + P VL C H+ CK+C L L I++ T P +P P
Sbjct: 3 EKDLSCPICYDIYRD----PVVLSCSHSFCKDC-LQLWWREIKIKTCPICKTIPLLNNPP 57
Query: 108 WCNMVSLRLICKGNLKFPQKNYYLLWMVESMNGDRSKSNPHFRG-------DHQPASSLN 160
N+V L+ +C+ +L+ V+ + S + H D QPA +
Sbjct: 58 R-NLV-LKNLCEA---------FLMKRVQKPSQSESLCSLHSEKLKLFCLHDQQPACLIC 106
Query: 161 RNSAVRN 167
R+S V N
Sbjct: 107 RDSKVHN 113
>gi|341875541|gb|EGT31476.1| hypothetical protein CAEBREN_09846 [Caenorhabditis brenneri]
Length = 334
Score = 37.4 bits (85), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 12/91 (13%)
Query: 53 LECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCPWCNMV 112
LEC IC F+ V+ + CGH+LC+ C L + R + CP+C V
Sbjct: 250 LECKICSSEFDDVKIPRMLKECGHSLCEGCADNLLQLSKRQ---------HLFCPFCRKV 300
Query: 113 SLRLICKGNLKFPQKNYYLLWMVESMNGDRS 143
+ + G+ KN++++ M++ R+
Sbjct: 301 T---VVNGSASMLPKNFFIVDMIDERKNKRA 328
>gi|409047067|gb|EKM56546.1| hypothetical protein PHACADRAFT_253734 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1267
Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 22 IRLKNDALKPSQVSSELSDDDASLNNSREEGLECPICWESFNVVENLPYVLWCGHTLCKN 81
IR +DAL+ +++ + +L+ S G CP+C + + LP L CGH+ CK+
Sbjct: 1027 IRGNDDALRVTRLILRHVQERHNLHRS-HRGNSCPVCLDDVS----LPVTLPCGHSWCKS 1081
Query: 82 CVLGLQRAVIRLPTLP 97
C+ G A + P
Sbjct: 1082 CLEGYLLATVDTRVFP 1097
>gi|242033517|ref|XP_002464153.1| hypothetical protein SORBIDRAFT_01g013190 [Sorghum bicolor]
gi|241918007|gb|EER91151.1| hypothetical protein SORBIDRAFT_01g013190 [Sorghum bicolor]
Length = 231
Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 6/37 (16%)
Query: 50 EEGLECPICWES-FNVVENLPYVLWCGHTLCKNCVLG 85
E L CPIC ++ FN PY L CGH CK+C G
Sbjct: 126 EYSLTCPICLDTLFN-----PYALSCGHLFCKSCACG 157
>gi|348536016|ref|XP_003455493.1| PREDICTED: midline-1-like [Oreochromis niloticus]
Length = 669
Score = 37.4 bits (85), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 29/65 (44%), Gaps = 9/65 (13%)
Query: 50 EEGLECPICWESFNVVENLPYVLWCGHTLCKNCVLGLQRAVIR--LPTLPFQLPFFITCP 107
E L CPIC E F P +L C H+LC NC R +I P+ P Q CP
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCA---HRILISHCTPSEPIQSISAFQCP 57
Query: 108 WCNMV 112
C V
Sbjct: 58 TCRYV 62
>gi|341875668|gb|EGT31603.1| hypothetical protein CAEBREN_17726 [Caenorhabditis brenneri]
Length = 367
Score = 37.4 bits (85), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 21/103 (20%)
Query: 51 EGLECPICWESFNVVENL--PYVL-WCGHTLCKNCVLGLQRAVIRLPTLPFQLPFFITCP 107
EG C ICW +F+ ++ P V CGH+ C C+ + R P CP
Sbjct: 12 EGFVCSICWTNFSATDSAMKPRVAPQCGHSFCLGCLEAIARTSRTQPPT-------TRCP 64
Query: 108 WCNMVSLRLICKGNLKFPQK---NYYLLWMVESMNGDRSKSNP 147
C + N+ P+ NY +L ++ SMN + + P
Sbjct: 65 SCRRET-------NI-LPKNFVINYAMLDVINSMNEAKERQRP 99
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.325 0.139 0.434
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,186,309,979
Number of Sequences: 23463169
Number of extensions: 159976560
Number of successful extensions: 568443
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 502
Number of HSP's successfully gapped in prelim test: 807
Number of HSP's that attempted gapping in prelim test: 567254
Number of HSP's gapped (non-prelim): 1415
length of query: 278
length of database: 8,064,228,071
effective HSP length: 140
effective length of query: 138
effective length of database: 9,074,351,707
effective search space: 1252260535566
effective search space used: 1252260535566
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 76 (33.9 bits)