Your job contains 1 sequence.
>023740
MGNQKQKWTAEEEEALLAGVAKHGPGKWKNILRDPQFAPSLTQRSNIDLKDKWRNLSVSN
AQQGSKDKIRGPKLKTTVVAPLSNTPNSAPAASLTRNVSSGAVMNDTSTSALDGKNGPKY
NAMIFEAISTLKDANGSDISAIANFIEERQEAPPNFRRLLSSRLRRLVSQGKLEKVRNCY
KIRKETSIGVKTPTPKQKDARLRPPRNSALMTSREIVEEASITAAYRIAEAENKSFLAAE
AFKEAERVSKMAEDTDAMLQLVKEIYERCSRGEIVLLA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 023740
(278 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2030275 - symbol:AT1G72740 species:3702 "Arabi... 551 3.0e-53 1
TAIR|locus:2007878 - symbol:AT1G17520 species:3702 "Arabi... 507 1.4e-48 1
TAIR|locus:2031095 - symbol:TRB1 "telomere repeat binding... 332 4.9e-30 1
TAIR|locus:2158611 - symbol:TRB2 "AT5G67580" species:3702... 270 1.8e-23 1
TAIR|locus:2097325 - symbol:TRB3 "telomere repeat binding... 249 3.0e-21 1
TAIR|locus:2020193 - symbol:AT1G54260 species:3702 "Arabi... 176 1.6e-13 1
TAIR|locus:2020183 - symbol:AT1G54240 species:3702 "Arabi... 169 9.1e-13 1
TAIR|locus:2033118 - symbol:AT1G06760 species:3702 "Arabi... 140 1.8e-07 1
TAIR|locus:2064332 - symbol:AT2G30620 species:3702 "Arabi... 123 7.3e-07 2
TAIR|locus:2020118 - symbol:AT1G54230 species:3702 "Arabi... 91 7.9e-07 2
TAIR|locus:2060984 - symbol:HIS1-3 "histone H1-3" species... 117 7.0e-06 1
ZFIN|ZDB-GENE-090612-2 - symbol:terf1 "telomeric repeat b... 113 0.00057 1
>TAIR|locus:2030275 [details] [associations]
symbol:AT1G72740 species:3702 "Arabidopsis thaliana"
[GO:0000786 "nucleosome" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0006334 "nucleosome assembly" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] InterPro:IPR001005 InterPro:IPR005818
InterPro:IPR009057 Pfam:PF00249 Pfam:PF00538 PROSITE:PS51504
SMART:SM00526 SMART:SM00717 EMBL:CP002684 GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AC010926 InterPro:IPR017930 PROSITE:PS51294 GO:GO:0006334
GO:GO:0000786 HOGENOM:HOG000238013 EMBL:AF372925 EMBL:AY124849
IPI:IPI00543298 IPI:IPI00846964 PIR:C96752 RefSeq:NP_177418.2
UniGene:At.19127 ProteinModelPortal:F4IEY4 SMR:F4IEY4 PRIDE:F4IEY4
EnsemblPlants:AT1G72740.1 GeneID:843606 KEGG:ath:AT1G72740
TAIR:At1g72740 OMA:IEPRHEV Uniprot:F4IEY4
Length = 287
Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
Identities = 123/292 (42%), Positives = 168/292 (57%)
Query: 1 MGNQKQKWTXXXXXXXXXGVAKHGPGKWKNILRDPQFAPSLTQRSNIDLKDKWRNLSVSN 60
MGNQK KWT G+ KHGPGKWKNILRDP+FA L RSNIDLKDKWRNLSV
Sbjct: 1 MGNQKLKWTAEEEEALLAGIRKHGPGKWKNILRDPEFADQLIHRSNIDLKDKWRNLSVPP 60
Query: 61 AQQGSKDKIRGPKLKTTVVAPLSNTPNSA----PAASLT----RNVSSGAVMNDTSTSAL 112
Q +K R K+K P ++ ++ P ++ R ++ D +T
Sbjct: 61 GTQSLTNKARPAKVKEEGDTPAADANDAVTIPRPIPTIPPPPGRRTLPSELIPDENT--- 117
Query: 113 DGKNGPKYNAMIFEAISTLKDANGSDISAIANFIEERQEAPPNFXXXXXXXXXXXVSQGK 172
KN P+Y+ +IFEA+S L D NGSD+S+I +FIE R E PPNF +Q K
Sbjct: 118 --KNAPRYDGVIFEALSALADGNGSDVSSIYHFIEPRHEVPPNFRRILSTRLRRLAAQSK 175
Query: 173 LEKV------RNCYKIRKETSIGVKTPTPKQKDARLRPPRNSALMTSREIVEEASITAAY 226
LEKV +N YKI + + P PK+ +LR N S++++EEA+ITAA
Sbjct: 176 LEKVSTFKSIQNFYKIPDPSGTKIGVPKPKETHTKLRQANNQTSADSQQMIEEAAITAAC 235
Query: 227 RIAEAENKSFLAAEAFKEAERVSKMAEDTDAMLQLVKEIYERCSRGEIVLLA 278
++ EAENK +A A +E E+++K+AE+ +L + E++E CS GE +LLA
Sbjct: 236 KVVEAENKIDVAKLAAEEFEKMTKIAEENRKLLVIATEMHELCSCGETMLLA 287
>TAIR|locus:2007878 [details] [associations]
symbol:AT1G17520 species:3702 "Arabidopsis thaliana"
[GO:0000786 "nucleosome" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0009651 "response to salt stress" evidence=IEP] [GO:0009723
"response to ethylene stimulus" evidence=IEP] [GO:0009733 "response
to auxin stimulus" evidence=IEP] [GO:0009751 "response to salicylic
acid stimulus" evidence=IEP] [GO:0009753 "response to jasmonic acid
stimulus" evidence=IEP] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] InterPro:IPR001005 InterPro:IPR005818
InterPro:IPR009057 Pfam:PF00249 Pfam:PF00538 PROSITE:PS51504
SMART:SM00526 SMART:SM00717 EMBL:CP002684 GO:GO:0005634
GO:GO:0046686 GO:GO:0009733 GO:GO:0009753 GO:GO:0009723
GO:GO:0003677 GO:GO:0009651 GO:GO:0003700 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006351 GO:GO:0003682 GO:GO:0009751
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AC022492 InterPro:IPR017930
PROSITE:PS51294 KO:K09422 GO:GO:0006334 GO:GO:0000786
HOGENOM:HOG000238013 EMBL:AY519538 EMBL:AK118533 EMBL:BT005290
IPI:IPI00518720 IPI:IPI00524616 RefSeq:NP_173195.2 UniGene:At.41830
ProteinModelPortal:F4I7L1 SMR:F4I7L1 EnsemblPlants:AT1G17520.1
GeneID:838326 KEGG:ath:AT1G17520 TAIR:At1g17520 PhylomeDB:F4I7L1
Uniprot:F4I7L1
Length = 296
Score = 507 (183.5 bits), Expect = 1.4e-48, P = 1.4e-48
Identities = 127/288 (44%), Positives = 165/288 (57%)
Query: 1 MGNQKQKWTXXXXXXXXXGVAKHGPGKWKNILRDPQFAPSLTQRSNIDLKDKWRNLSVSN 60
MGNQK KWT GV KHGPGKWKNILRDP+ A L+ RSNIDLKDKWRNLSV+
Sbjct: 1 MGNQKLKWTAEEEEALLAGVRKHGPGKWKNILRDPELAEQLSSRSNIDLKDKWRNLSVAP 60
Query: 61 AQQGSKDKIRGPKLKTT-----------VVAPLSNTPNSAPAASLTRNVSSGAVMNDTST 109
QGSKDKIR PK+K +V P +++ +S+P A+L R+ SS ++D+
Sbjct: 61 GIQGSKDKIRTPKIKAAAFHLAAAAAAAIVTP-THSGHSSPVATLPRSGSSDLSIDDSFN 119
Query: 110 SALDGKNGPKYNAMIFEAISTLKDANGSDISAIANFIEERQEAPPNFXXXXXXXXXXXVS 169
D KN P+Y+ MIFEA+S L DANGSD+SAI NFIE+RQE PPNF +
Sbjct: 120 IVADPKNAPRYDGMIFEALSNLTDANGSDVSAIFNFIEQRQEVPPNFRRMLSSRLRRLAA 179
Query: 170 QGKLEKV------RNCYKIRKETSIGVKTPTPKQKDARLRPPRNSALMTSREIVEEASIT 223
QGKLEKV +N YK+ + S+ +TP RP ++ SR+ +
Sbjct: 180 QGKLEKVSHLKSTQNFYKMN-DNSLVQRTPHVA------RPKESNT--KSRQQTNSQGPS 230
Query: 224 AAYRIAEAENKSFLAAEAFKEAER---VSK-MAEDTDAMLQLVKEIYE 267
+ +I EA S AA E E VSK AE+ + +++L +E E
Sbjct: 231 ISQQIVEA---SITAAYKLVEVENKLDVSKGAAEEIERLMKLAEEADE 275
Score = 399 (145.5 bits), Expect = 3.9e-37, P = 3.9e-37
Identities = 92/210 (43%), Positives = 134/210 (63%)
Query: 78 VVAPLSNTPNSAPAASLTRNVSSGAVMNDTSTSALDGKNGPKYNAMIFEAISTLKDANGS 137
+V P +++ +S+P A+L R+ SS ++D+ D KN P+Y+ MIFEA+S L DANGS
Sbjct: 89 IVTP-THSGHSSPVATLPRSGSSDLSIDDSFNIVADPKNAPRYDGMIFEALSNLTDANGS 147
Query: 138 DISAIANFIEERQEAPPNFXXXXXXXXXXXVSQGKLEKV------RNCYKIRKETSIGVK 191
D+SAI NFIE+RQE PPNF +QGKLEKV +N YK+ + S+ +
Sbjct: 148 DVSAIFNFIEQRQEVPPNFRRMLSSRLRRLAAQGKLEKVSHLKSTQNFYKMN-DNSLVQR 206
Query: 192 TP---TPKQKDARLRPPRNS-ALMTSREIVEEASITAAYRIAEAENKSFLAAEAFKEAER 247
TP PK+ + + R NS S++IVE ASITAAY++ E ENK ++ A +E ER
Sbjct: 207 TPHVARPKESNTKSRQQTNSQGPSISQQIVE-ASITAAYKLVEVENKLDVSKGAAEEIER 265
Query: 248 VSKMAEDTDAMLQLVKEIYERCSRGEIVLL 277
+ K+AE+ D ML + +E++E CS+G+I+ L
Sbjct: 266 LMKLAEEADEMLVIAREMHEECSQGKIMYL 295
>TAIR|locus:2031095 [details] [associations]
symbol:TRB1 "telomere repeat binding factor 1"
species:3702 "Arabidopsis thaliana" [GO:0000786 "nucleosome"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0006334 "nucleosome assembly"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0009651 "response to salt stress"
evidence=IEP] [GO:0009723 "response to ethylene stimulus"
evidence=IEP] [GO:0009733 "response to auxin stimulus"
evidence=IEP] [GO:0009737 "response to abscisic acid stimulus"
evidence=IEP] [GO:0009739 "response to gibberellin stimulus"
evidence=IEP] [GO:0009751 "response to salicylic acid stimulus"
evidence=IEP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IEP] [GO:0046686 "response to cadmium ion" evidence=IEP]
[GO:0003691 "double-stranded telomeric DNA binding" evidence=IDA]
[GO:0000911 "cytokinesis by cell plate formation" evidence=RCA]
[GO:0010413 "glucuronoxylan metabolic process" evidence=RCA]
[GO:0045492 "xylan biosynthetic process" evidence=RCA]
InterPro:IPR001005 InterPro:IPR005818 InterPro:IPR009057
Pfam:PF00249 Pfam:PF00538 PROSITE:PS51504 SMART:SM00526
SMART:SM00717 EMBL:CP002684 GO:GO:0009737 GO:GO:0046686
GO:GO:0009733 GO:GO:0009753 GO:GO:0005730 GO:GO:0009723
GO:GO:0009651 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 GO:GO:0003682 GO:GO:0009751 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009739 InterPro:IPR017930 PROSITE:PS51294
KO:K09422 GO:GO:0006334 GO:GO:0000786 EMBL:AC015445 GO:GO:0003691
EMBL:U83623 EMBL:U83624 EMBL:AY519539 EMBL:AY062736 EMBL:BT009677
EMBL:AY087994 IPI:IPI00542861 RefSeq:NP_564559.1 RefSeq:NP_849789.1
RefSeq:NP_973998.1 UniGene:At.27250 HSSP:P54274
ProteinModelPortal:Q8VWK4 SMR:Q8VWK4 IntAct:Q8VWK4
MINT:MINT-1212432 STRING:Q8VWK4 PRIDE:Q8VWK4
EnsemblPlants:AT1G49950.1 EnsemblPlants:AT1G49950.2
EnsemblPlants:AT1G49950.3 GeneID:841418 KEGG:ath:AT1G49950
TAIR:At1g49950 HOGENOM:HOG000238013 InParanoid:Q8VWK4 OMA:MANGWGS
PhylomeDB:Q8VWK4 ProtClustDB:CLSN2684376 Genevestigator:Q8VWK4
Uniprot:Q8VWK4
Length = 300
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 99/292 (33%), Positives = 142/292 (48%)
Query: 1 MGNQKQKWTXXXXXXXXXGVAKHGPGKWKNILRDPQFAPSLTQRSNIDLKDKWRNLSVSN 60
MG KQKWT GV KHGPGKW+ IL+DP+F+ L RSN+DLKDKWRN+SV
Sbjct: 1 MGAPKQKWTQEEESALKSGVIKHGPGKWRTILKDPEFSGVLYLRSNVDLKDKWRNMSVMA 60
Query: 61 AQQGSKDKIRGPKLKTTVVAPLSNTPNSAPAASLTRNVSSGAVMNDTSTSALDGKNGP-- 118
GS++K R +K T P NS +LT ++ S N +TS L + P
Sbjct: 61 NGWGSREKSR-LAVKRTFSLP-KQEENSL---ALTNSLQSDEE-NVDATSGLQVSSNPPP 114
Query: 119 -----KYNAMIFEAISTLKDANGSDISAIANFIEERQEAPPNFXXXXXXXXXXXVSQGKL 173
+ +++I EAI+TLK+ G + + I +IE++ APP+F S GKL
Sbjct: 115 RRPNVRLDSLIMEAIATLKEPGGCNKTTIGAYIEDQYHAPPDFKRLLSTKLKYLTSCGKL 174
Query: 174 EKVRNCYKIRKETSI------GVKTPTPKQKDARLRPPRNSA----LMTSREIVEEASIT 223
KV+ Y+I T + G+ KQ+ + L P+ T +I E +
Sbjct: 175 VKVKRKYRIPNSTPLSSHRRKGLGVFGGKQRTSSLPSPKTDIDEVNFQTRSQIDTEIARM 234
Query: 224 AAYRIAEAENKSFLA---AEA-FKEAERVSKMAEDTDAMLQLVKEIYERCSR 271
+ + EA + A AEA EAE +K AE +A + + E S+
Sbjct: 235 KSMNVHEAAAVAAQAVAEAEAAMAEAEEAAKEAEAAEAEAEAAQAFAEEASK 286
>TAIR|locus:2158611 [details] [associations]
symbol:TRB2 "AT5G67580" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006334 "nucleosome assembly"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0003691
"double-stranded telomeric DNA binding" evidence=IDA] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043047
"single-stranded telomeric DNA binding" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0009651 "response to salt
stress" evidence=IEP] [GO:0009723 "response to ethylene stimulus"
evidence=IEP] [GO:0009733 "response to auxin stimulus"
evidence=IEP] [GO:0009737 "response to abscisic acid stimulus"
evidence=IEP] [GO:0009739 "response to gibberellin stimulus"
evidence=IEP] [GO:0009751 "response to salicylic acid stimulus"
evidence=IEP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IEP] [GO:0046686 "response to cadmium ion" evidence=IEP]
[GO:0042162 "telomeric DNA binding" evidence=IDA]
InterPro:IPR001005 InterPro:IPR005818 InterPro:IPR009057
Pfam:PF00249 Pfam:PF00538 PROSITE:PS51504 SMART:SM00526
SMART:SM00717 GO:GO:0009737 GO:GO:0005634 EMBL:CP002688
GO:GO:0046686 GO:GO:0009733 GO:GO:0009753 GO:GO:0005730
GO:GO:0009723 GO:GO:0009651 GO:GO:0003700 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006351 GO:GO:0003682 GO:GO:0009751
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 InterPro:IPR017930
PROSITE:PS51294 KO:K09422 GO:GO:0006334 GO:GO:0000786 GO:GO:0043047
EMBL:AB013390 GO:GO:0003691 HSSP:P54274 HOGENOM:HOG000238013
ProtClustDB:CLSN2684376 EMBL:U83836 EMBL:U83837 EMBL:AY519545
EMBL:AY039883 EMBL:AY077668 IPI:IPI00536586 RefSeq:NP_201559.1
RefSeq:NP_851286.1 UniGene:At.28806 UniGene:At.7636
ProteinModelPortal:Q9FJW5 SMR:Q9FJW5 IntAct:Q9FJW5 STRING:Q9FJW5
EnsemblPlants:AT5G67580.1 EnsemblPlants:AT5G67580.2 GeneID:836894
KEGG:ath:AT5G67580 TAIR:At5g67580 InParanoid:Q9FJW5 OMA:DERAKPT
PhylomeDB:Q9FJW5 Genevestigator:Q9FJW5 Uniprot:Q9FJW5
Length = 299
Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 86/269 (31%), Positives = 122/269 (45%)
Query: 1 MGNQKQKWTXXXXXXXXXGVAKHGPGKWKNILRDPQFAPSLTQRSNIDLKDKWRNLSVSN 60
MG KQKWT GV KHG GKW+ IL D +F+ L RSN+DLKDKWRN+SV+
Sbjct: 1 MGAPKQKWTPEEEAALKAGVLKHGTGKWRTILSDTEFSLILKSRSNVDLKDKWRNISVT- 59
Query: 61 AQQGSKDKIRGPKLKTTVVAPLSNTPNSA-PAASLTRN------VSSGAVMNDTSTSALD 113
A GS+ K + LK T + N+A +LT + S G + +
Sbjct: 60 ALWGSRKKAK-LALKRTPPGTKQDDNNTALTIVALTNDDERAKPTSPGGSGGGSPRTCAS 118
Query: 114 GKNGPKYNAMIFEAISTLKDANGSDISAIANFIEERQEAPPNFXXXXXXXXXXXVSQGKL 173
++ + +IFEAI+ L++ GSD ++I +IEE + PPN S G L
Sbjct: 119 KRSITSLDKIIFEAITNLRELRGSDRTSIFLYIEENFKTPPNMKRHVAVRLKHLSSNGTL 178
Query: 174 EKVRNCYKIRKE-TSIGVKTPTPK-------QKDARLRPPRNSA-LMTSREIVEEASITA 224
K+++ Y+ G + P+ +KD +P N A +T + E +
Sbjct: 179 VKIKHKYRFSSNFIPAGARQKAPQLFLEGNNKKDPT-KPEENGANSLTKFRVDGELYMIK 237
Query: 225 AYRIAEAENKSFLAAEAFKEAERVSKMAE 253
EA AA A EAE AE
Sbjct: 238 GMTAQEAAEA---AARAVAEAEFAITEAE 263
Score = 124 (48.7 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 57/219 (26%), Positives = 92/219 (42%)
Query: 52 KWRNLSVSNAQQGSKDKIRGPKLKTTVVAPLSNTPNSAPAASLTRNVSSGAVMNDTSTSA 111
K L++ G+K L T+VA L+N A + S G + +
Sbjct: 66 KKAKLALKRTPPGTKQDDNNTAL--TIVA-LTNDDERA------KPTSPGGSGGGSPRTC 116
Query: 112 LDGKNGPKYNAMIFEAISTLKDANGSDISAIANFIEERQEAPPNFXXXXXXXXXXXVSQG 171
++ + +IFEAI+ L++ GSD ++I +IEE + PPN S G
Sbjct: 117 ASKRSITSLDKIIFEAITNLRELRGSDRTSIFLYIEENFKTPPNMKRHVAVRLKHLSSNG 176
Query: 172 KLEKVRNCYKIRKE-TSIGVKTPTPK-------QKDARLRPPRNSA-LMTSREIVEEASI 222
L K+++ Y+ G + P+ +KD +P N A +T + E +
Sbjct: 177 TLVKIKHKYRFSSNFIPAGARQKAPQLFLEGNNKKDPT-KPEENGANSLTKFRVDGELYM 235
Query: 223 T---AAYRIAEAENKSFLAAE-AFKEAERVSKMAEDTDA 257
A AEA ++ AE A EAE+ +K AE +A
Sbjct: 236 IKGMTAQEAAEAAARAVAEAEFAITEAEQAAKEAERAEA 274
>TAIR|locus:2097325 [details] [associations]
symbol:TRB3 "telomere repeat binding factor 3"
species:3702 "Arabidopsis thaliana" [GO:0000786 "nucleosome"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006334
"nucleosome assembly" evidence=IEA] [GO:0003691 "double-stranded
telomeric DNA binding" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0043047
"single-stranded telomeric DNA binding" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0009651 "response to salt
stress" evidence=IEP] [GO:0009723 "response to ethylene stimulus"
evidence=IEP] [GO:0009733 "response to auxin stimulus"
evidence=IEP] [GO:0009739 "response to gibberellin stimulus"
evidence=IEP] [GO:0009751 "response to salicylic acid stimulus"
evidence=IEP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IEP] [GO:0046686 "response to cadmium ion" evidence=IEP]
InterPro:IPR001005 InterPro:IPR005818 InterPro:IPR009057
Pfam:PF00249 Pfam:PF00538 PROSITE:PS51504 SMART:SM00526
SMART:SM00717 GO:GO:0046686 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009733 GO:GO:0009753 EMBL:AL132965 GO:GO:0005730
GO:GO:0009723 GO:GO:0009651 GO:GO:0003700 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006351 GO:GO:0003682 GO:GO:0009751
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 InterPro:IPR017930
PROSITE:PS51294 KO:K09422 GO:GO:0006334 GO:GO:0000786 GO:GO:0043047
GO:GO:0003691 HSSP:P54274 HOGENOM:HOG000238013
ProtClustDB:CLSN2684376 EMBL:U83838 EMBL:U83839 EMBL:AY519542
EMBL:AY058887 EMBL:AY065069 EMBL:AY079043 IPI:IPI00527572
PIR:T46051 RefSeq:NP_190554.1 UniGene:At.26646
ProteinModelPortal:Q9M2X3 SMR:Q9M2X3 IntAct:Q9M2X3
MINT:MINT-1212448 STRING:Q9M2X3 EnsemblPlants:AT3G49850.1
GeneID:824147 KEGG:ath:AT3G49850 TAIR:At3g49850 eggNOG:NOG264278
InParanoid:Q9M2X3 OMA:PPAGSCE PhylomeDB:Q9M2X3
Genevestigator:Q9M2X3 Uniprot:Q9M2X3
Length = 295
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 84/275 (30%), Positives = 123/275 (44%)
Query: 1 MGNQKQKWTXXXXXXXXXGVAKHGPGKWKNILRDPQFAPSLTQRSNIDLKDKWRNLSVSN 60
MG K KWT GV KHG GKW+ IL DP ++ L RSN+DLKDKWRN+SV+
Sbjct: 1 MGAPKLKWTPEEETALKAGVLKHGTGKWRTILSDPVYSTILKSRSNVDLKDKWRNISVT- 59
Query: 61 AQQGSKDKIRGPKLKTTVVAPLSNTPNSAPAASLT----RNVSSGAVMNDTSTSALDGKN 116
A GS+ K + LK T PLS + A ++T N G D +
Sbjct: 60 ALWGSRKKAK-LALKRT---PLSGSRQDDNATAITIVSLANGDVGGQQIDAPSPPAGSCE 115
Query: 117 GPK----YNAMIFEAISTLKDANGSDISAIANFIEERQEAPPNFXXXXXXXXXXXVSQGK 172
P+ + +I EAI++LK G D +I +IEE + P+ + G
Sbjct: 116 PPRPSTSVDKIILEAITSLKRPFGPDGKSILMYIEENFKMQPDMKRLVTSRLKYLTNVGT 175
Query: 173 LEKVRNCYKIRKETSI---GVKTPT---PKQKDARLRPPRNSAL-MTSREIVEEASITAA 225
L K ++ Y+I + G ++P K+ +P N +T ++ E I
Sbjct: 176 LVKKKHKYRISQNYMAEGEGQRSPQLLLEGNKENTPKPEENGVKNLTKSQVGGEVMIMGM 235
Query: 226 YR--IAEAENKSFLAAE-AFKEAERVSKMAEDTDA 257
A A ++ AE A EAE ++ A+ +A
Sbjct: 236 TEKEAAAAAARAVAEAEFAMAEAEEAAREADKAEA 270
>TAIR|locus:2020193 [details] [associations]
symbol:AT1G54260 species:3702 "Arabidopsis thaliana"
[GO:0000786 "nucleosome" evidence=IEA;ISS] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006334 "nucleosome assembly" evidence=IEA;ISS]
InterPro:IPR005818 Pfam:PF00538 PROSITE:PS51504 SMART:SM00526
EMBL:CP002684 GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006334 GO:GO:0000786 IPI:IPI00541984
RefSeq:NP_175828.1 UniGene:At.50951 ProteinModelPortal:F4HV94
EnsemblPlants:AT1G54260.1 GeneID:841867 KEGG:ath:AT1G54260
OMA:EESHTML Uniprot:F4HV94
Length = 197
Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 61/173 (35%), Positives = 86/173 (49%)
Query: 116 NGPKYNAMIFEAISTLKDANGSDISAIANFIEERQEAPPNFXXXXXXXXXXXVSQGKLEK 175
N +Y+AM+FEA+ST+ D NGS++ I FIE + E P NF VSQ KL+K
Sbjct: 3 NDARYDAMVFEAVSTINDENGSNLKEILRFIEGQHEVPQNFKKLLSYSLGILVSQDKLKK 62
Query: 176 VRNCYKIRKETSIGVKTPTPKQKDARLRPP--------RNSALMTSRE----IVEEASIT 223
VRN YKI +I T T + KD+ +PP + M E +V + +
Sbjct: 63 VRNRYKISVTKAIK-PTLTLRPKDST-KPPELPNWYEEQQDFRMFLSECLIILVSQGKLE 120
Query: 224 AA---YRIAEAENKSF-LAAE--AFKEAERVSKM------AEDTDAMLQLVKE 264
Y+I+E ENK +A E A K AE +K E+ + M +LV+E
Sbjct: 121 KVLDRYKISELENKVLEVAPEVVAMKLAESDNKRLIAAEAVEEEERMHKLVEE 173
Score = 138 (53.6 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 28/64 (43%), Positives = 46/64 (71%)
Query: 215 EIVEEASITAAYRIAEAENKSFLAAEAFKEAERVSKMAEDTDAMLQLVKEIYERCSRG-E 273
+++E A A ++AE++NK +AAEA +E ER+ K+ E++ MLQL EI+++C+ G E
Sbjct: 134 KVLEVAPEVVAMKLAESDNKRLIAAEAVEEEERMHKLVEESHTMLQLCLEIHQQCALGQE 193
Query: 274 IVLL 277
+VLL
Sbjct: 194 VVLL 197
>TAIR|locus:2020183 [details] [associations]
symbol:AT1G54240 species:3702 "Arabidopsis thaliana"
[GO:0000786 "nucleosome" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006334
"nucleosome assembly" evidence=IEA] InterPro:IPR005818
PROSITE:PS51504 SMART:SM00526 EMBL:CP002684 GO:GO:0005634
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006334
GO:GO:0000786 EMBL:DQ446358 IPI:IPI00534957 RefSeq:NP_175826.2
UniGene:At.52193 ProteinModelPortal:Q1PFK5
EnsemblPlants:AT1G54240.1 GeneID:841865 KEGG:ath:AT1G54240
TAIR:At1g54240 OMA:TCASFAP PhylomeDB:Q1PFK5 ProtClustDB:CLSN2699142
Genevestigator:Q1PFK5 Uniprot:Q1PFK5
Length = 229
Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 63/211 (29%), Positives = 106/211 (50%)
Query: 88 SAPAASLTRNVSSGA------VMNDTSTSALDGKNGPKYNAMIFEAISTL-KDANGSDIS 140
S+PAA+ + SS A +M D+ G +G + +IF+A+ T+ ++ NG D+
Sbjct: 20 SSPAATDSSEPSSYAEQLERLMMIDSEEDR--GPSGFTTDELIFQALETVYENHNGLDVD 77
Query: 141 AIANFIEERQEAPPNFXXXXXXXXXXXVSQGKLEKVRNCYKIRK---ET---SIGV---- 190
AI FI+ER E +F VS+G++ KV N YKI + +T S+G
Sbjct: 78 AIFTFIKERNELQEDFRERLENQLRYLVSEGQVYKVGNLYKIPRGVFDTPVVSVGDSNQR 137
Query: 191 KTPTPKQKD---ARLRPPRNSALMTSREIVEEASITAAYRIAEAENKSFLAAEAFKEAER 247
+T P+ A+ P ++ V+ I A +AEAE+ A EA++ A++
Sbjct: 138 ETMDPEDSTGTKAQDTPSTCASFAPPTTEVDPRIIALAKEVAEAEHLELEAKEAYELADK 197
Query: 248 VSKMAE-DTDAMLQLVKEIYERCSRGEIVLL 277
+++ + +++ LQL EI RC+ GE + L
Sbjct: 198 HAQLLKLESNITLQLAVEILNRCANGEKIFL 228
>TAIR|locus:2033118 [details] [associations]
symbol:AT1G06760 species:3702 "Arabidopsis thaliana"
[GO:0000786 "nucleosome" evidence=IEA;ISS] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006334 "nucleosome assembly" evidence=IEA;ISS]
InterPro:IPR005818 InterPro:IPR005819 Pfam:PF00538 PRINTS:PR00624
PROSITE:PS51504 SMART:SM00526 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006334 GO:GO:0000786
EMBL:AC011001 KO:K11275 eggNOG:NOG126832 EMBL:X62458 EMBL:X62456
EMBL:AF428314 EMBL:AY050452 EMBL:AY097352 EMBL:AY086374
IPI:IPI00547445 PIR:S19698 RefSeq:NP_172161.1 UniGene:At.23323
UniGene:At.48159 ProteinModelPortal:P26568 SMR:P26568 STRING:P26568
PaxDb:P26568 PRIDE:P26568 EnsemblPlants:AT1G06760.1 GeneID:837187
KEGG:ath:AT1G06760 TAIR:At1g06760 HOGENOM:HOG000240494
InParanoid:P26568 OMA:AATIEGN ProtClustDB:CLSN2914236
Genevestigator:P26568 GermOnline:AT1G06760 Uniprot:P26568
Length = 274
Score = 140 (54.3 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 56/195 (28%), Positives = 81/195 (41%)
Query: 76 TTVVAPLSNTP-NSAPAAS--LTRNVSSGAVMNDTSTSALDGK----NGPKYNAMIFEAI 128
T AP+++ PAA T+NV V + +A K + P Y MI +AI
Sbjct: 16 TAADAPVTDAAVEKKPAAKGRKTKNVKE--VKEKKTVAAAPKKRTVSSHPTYEEMIKDAI 73
Query: 129 STLKDANGSDISAIANFIEE-RQEAPPNFXXXXXXXXXXXVSQGKLEKVRNCYKIRKETS 187
TLK+ GS AI FIEE R+E PP F V+ GKL KV+ +K+ ++
Sbjct: 74 VTLKERTGSSQYAIQKFIEEKRKELPPTFRKLLLLNLKRLVASGKLVKVKASFKLPSASA 133
Query: 188 --IGVKTPTPKQKDARLRPPRNSALMTSREIV--EEASITAAYRIAEAENKSFLAAEAFK 243
K K A+ +P + R++ +A T A + A K A K
Sbjct: 134 KASSPKAAAEKSAPAKKKPATVAVTKAKRKVAAASKAKKTIAVKPKTAAAKKVTAKAKAK 193
Query: 244 EAERVSKMAEDTDAM 258
R + A A+
Sbjct: 194 PVPRATAAATKRKAV 208
>TAIR|locus:2064332 [details] [associations]
symbol:AT2G30620 species:3702 "Arabidopsis thaliana"
[GO:0000786 "nucleosome" evidence=IEA;ISS] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS] [GO:0006334 "nucleosome assembly"
evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005739
"mitochondrion" evidence=IDA] InterPro:IPR005818 InterPro:IPR005819
Pfam:PF00538 PRINTS:PR00624 PROSITE:PS51504 SMART:SM00526
GO:GO:0005739 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005730
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006334
GO:GO:0000786 EMBL:U93215 KO:K11275 eggNOG:NOG126832
HOGENOM:HOG000240494 EMBL:X62459 EMBL:AF360211 EMBL:AY040059
EMBL:AY085789 IPI:IPI00532307 PIR:S19699 RefSeq:NP_180620.1
UniGene:At.20406 ProteinModelPortal:P26569 STRING:P26569
PaxDb:P26569 PRIDE:P26569 EnsemblPlants:AT2G30620.1 GeneID:817612
KEGG:ath:AT2G30620 TAIR:At2g30620 InParanoid:P26569 OMA:KVAVTKK
ProtClustDB:CLSN2912930 Genevestigator:P26569 GermOnline:AT2G30620
Uniprot:P26569
Length = 273
Score = 123 (48.4 bits), Expect = 7.3e-07, Sum P(2) = 7.3e-07
Identities = 43/145 (29%), Positives = 62/145 (42%)
Query: 59 SNAQQGSKDK-IRGPKLKTTVVAPLSNTPNSAPAASLTRNVSSGAVMNDTSTSALDGKNG 117
+ G+ D ++ P+ K S +A A + V + A +TS+
Sbjct: 10 TTVDSGAADTTVKSPEKKPAAKGGKSKKTTTAKATK--KPVKAAAPTKKKTTSS-----H 62
Query: 118 PKYNAMIFEAISTLKDANGSDISAIANFIEERQEA-PPNFXXXXXXXXXXXVSQGKLEKV 176
P Y MI +AI TLK+ GS AI FIEE+ ++ PP F V+ KL KV
Sbjct: 63 PTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLLLVNLKRLVASEKLVKV 122
Query: 177 RNCYKIRKETSIGVKTPT-PKQKDA 200
+ +KI S P P +K A
Sbjct: 123 KASFKIPSARSAATPKPAAPVKKKA 147
Score = 48 (22.0 bits), Expect = 7.3e-07, Sum P(2) = 7.3e-07
Identities = 20/72 (27%), Positives = 26/72 (36%)
Query: 192 TPTPKQKDARLRPPRNSALMTSREIVEEASITAAYRIAEAENKSFLAAEAFKEAERVSKM 251
T PK K +P S S+ A A R A+A S + K A K+
Sbjct: 187 TAKPKAKVTAAKPKSKSVAAVSKTKAVAAKPKAKERPAKASRTSTRTSPGKKVAAPAKKV 246
Query: 252 AEDTDAMLQLVK 263
A A + VK
Sbjct: 247 AVTKKAPAKSVK 258
>TAIR|locus:2020118 [details] [associations]
symbol:AT1G54230 species:3702 "Arabidopsis thaliana"
[GO:0000786 "nucleosome" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006334
"nucleosome assembly" evidence=IEA] InterPro:IPR005818
PROSITE:PS51504 SMART:SM00526 EMBL:CP002684 GO:GO:0005634
GO:GO:0003677 GO:GO:0006334 GO:GO:0000786 IPI:IPI00529563
RefSeq:NP_175825.2 UniGene:At.52192 ProteinModelPortal:F4HV91
PRIDE:F4HV91 EnsemblPlants:AT1G54230.1 GeneID:841864
KEGG:ath:AT1G54230 OMA:FQAKEAQ Uniprot:F4HV91
Length = 232
Score = 91 (37.1 bits), Expect = 7.9e-07, Sum P(2) = 7.9e-07
Identities = 20/51 (39%), Positives = 35/51 (68%)
Query: 228 IAEAENKSFLAAEAFKEAERVSKMAE-DTDAMLQLVKEIYERCSRGEIVLL 277
IAEAE+ F A EA + A++ +++ E +++ +LQL EI+ RC+ G+ + L
Sbjct: 181 IAEAEHLEFQAKEAQELADKHAQLLELESEIILQLAVEIFNRCANGQKIFL 231
Score = 88 (36.0 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 25/77 (32%), Positives = 38/77 (49%)
Query: 201 RLRPPRNSALMTSREIVEEASITAAYRIAEAENKSFLAAEAFKEAERVSKMAEDTDAMLQ 260
R+ R + R+ EA A +AE E+ F A EA + A+R S M +L+
Sbjct: 86 RVPATREDSTTPQRDPQAEA---VAKLVAETEHLEFQAKEAQELADRYSLMLNSECIILE 142
Query: 261 LVKEIYERCSRGEIVLL 277
L EI RC+ G+++ L
Sbjct: 143 LAVEILNRCANGQMIFL 159
Score = 83 (34.3 bits), Expect = 7.9e-07, Sum P(2) = 7.9e-07
Identities = 21/61 (34%), Positives = 30/61 (49%)
Query: 123 MIFEAISTLKDAN---GSDISAIANFIEERQEAPPNFXXXXXXXXXXXVSQGKLEKVRNC 179
M+FEA+ST+ D + G D+ I F +R P N V++ K+EKV N
Sbjct: 19 MVFEALSTIDDEHDGTGRDVDGIFKFNNDRYVIPDNSRERLRGEVEKLVAERKIEKVGNR 78
Query: 180 Y 180
Y
Sbjct: 79 Y 79
>TAIR|locus:2060984 [details] [associations]
symbol:HIS1-3 "histone H1-3" species:3702 "Arabidopsis
thaliana" [GO:0000786 "nucleosome" evidence=IEA;ISS] [GO:0003677
"DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006334 "nucleosome assembly"
evidence=IEA;ISS] [GO:0009414 "response to water deprivation"
evidence=IEP] [GO:0031492 "nucleosomal DNA binding" evidence=ISS]
InterPro:IPR005818 InterPro:IPR005819 Pfam:PF00538 PRINTS:PR00624
PROSITE:PS51504 SMART:SM00526 GO:GO:0005634 EMBL:CP002685
GO:GO:0009414 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006334
GO:GO:0000786 GO:GO:0031492 EMBL:AC006201 KO:K11275 EMBL:U72241
EMBL:U73781 EMBL:AY045797 EMBL:AY079414 EMBL:AY084603
IPI:IPI00539258 PIR:F84559 RefSeq:NP_179396.1 UniGene:At.24439
ProteinModelPortal:P94109 SMR:P94109 STRING:P94109
EnsemblPlants:AT2G18050.1 GeneID:816317 KEGG:ath:AT2G18050
TAIR:At2g18050 eggNOG:NOG258576 HOGENOM:HOG000241672
InParanoid:P94109 OMA:ARQPKSI PhylomeDB:P94109
ProtClustDB:CLSN2683930 ArrayExpress:P94109 Genevestigator:P94109
Uniprot:P94109
Length = 167
Score = 117 (46.2 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 30/83 (36%), Positives = 42/83 (50%)
Query: 118 PKYNAMIFEAISTLKDANGSDISAIANFIEERQEA--PPNFXXXXXXXXXXXVSQGKLEK 175
P Y MI EA+ LK+ NGS AIA IEE+ ++ P +F V++GKL K
Sbjct: 25 PPYFQMIKEALMVLKEKNGSSPYAIAKKIEEKHKSLLPESFRKTLSLQLKNSVAKGKLVK 84
Query: 176 VRNCYKIRKETSIGVKTPTPKQK 198
+R YK+ T + + K K
Sbjct: 85 IRASYKLSDTTKMITRQQDKKNK 107
>ZFIN|ZDB-GENE-090612-2 [details] [associations]
symbol:terf1 "telomeric repeat binding factor
(NIMA-interacting) 1" species:7955 "Danio rerio" [GO:0042162
"telomeric DNA binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000723 "telomere maintenance" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0000781
"chromosome, telomeric region" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001005 InterPro:IPR009057
InterPro:IPR013867 InterPro:IPR017357 Pfam:PF00249 Pfam:PF08558
PIRSF:PIRSF038016 ProDom:PD014243 SMART:SM00717
ZFIN:ZDB-GENE-090612-2 GO:GO:0005634 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
PROSITE:PS51294 GO:GO:0000781 GO:GO:0000723 GO:GO:0042162
Gene3D:1.25.40.210 SUPFAM:SSF63600 GeneTree:ENSGT00530000063796
EMBL:CR759896 EMBL:CR318587 IPI:IPI00482159
Ensembl:ENSDART00000106008 ArrayExpress:F1R8I5 Bgee:F1R8I5
Uniprot:F1R8I5
Length = 386
Score = 113 (44.8 bits), Expect = 0.00057, P = 0.00057
Identities = 23/58 (39%), Positives = 30/58 (51%)
Query: 3 NQKQKWTXXXXXXXXXGVAKHGPGKWKNILRDPQFAPSLTQRSNIDLKDKWRNLSVSN 60
+ ++KWT GV KHG GKW IL D F R+ ++LKD+WR L N
Sbjct: 330 HSRKKWTDVEDKKLKAGVKKHGVGKWSKILNDFDF----DNRTTVNLKDRWRVLKKQN 383
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.310 0.125 0.347 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 278 258 0.00087 114 3 11 23 0.40 34
32 0.48 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 12
No. of states in DFA: 591 (63 KB)
Total size of DFA: 170 KB (2099 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.83u 0.11s 23.94t Elapsed: 00:00:03
Total cpu time: 23.83u 0.11s 23.94t Elapsed: 00:00:03
Start: Fri May 10 18:06:18 2013 End: Fri May 10 18:06:21 2013