BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023743
(278 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1EKJ|A Chain A, The X-Ray Crystallographic Structure Of Beta Carbonic
Anhydrase From The C3 Dicot Pisum Sativum
pdb|1EKJ|B Chain B, The X-Ray Crystallographic Structure Of Beta Carbonic
Anhydrase From The C3 Dicot Pisum Sativum
pdb|1EKJ|C Chain C, The X-Ray Crystallographic Structure Of Beta Carbonic
Anhydrase From The C3 Dicot Pisum Sativum
pdb|1EKJ|D Chain D, The X-Ray Crystallographic Structure Of Beta Carbonic
Anhydrase From The C3 Dicot Pisum Sativum
pdb|1EKJ|E Chain E, The X-Ray Crystallographic Structure Of Beta Carbonic
Anhydrase From The C3 Dicot Pisum Sativum
pdb|1EKJ|F Chain F, The X-Ray Crystallographic Structure Of Beta Carbonic
Anhydrase From The C3 Dicot Pisum Sativum
pdb|1EKJ|G Chain G, The X-Ray Crystallographic Structure Of Beta Carbonic
Anhydrase From The C3 Dicot Pisum Sativum
pdb|1EKJ|H Chain H, The X-Ray Crystallographic Structure Of Beta Carbonic
Anhydrase From The C3 Dicot Pisum Sativum
Length = 221
Score = 195 bits (495), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 95/199 (47%), Positives = 126/199 (63%), Gaps = 1/199 (0%)
Query: 59 EEMKQRFLSFKKNKYFEELEHFQNLAKAQSPKFMVIACADSRVCPSYILGLQPGETFMIR 118
E +K FL FKK KY + + LAK QSP FMV AC+DSRVCPS++L QPGE F++R
Sbjct: 15 ERIKTGFLHFKKEKYDKNPALYGELAKGQSPPFMVFACSDSRVCPSHVLDFQPGEAFVVR 74
Query: 119 NVANLVPPLENGP-SETNAALEFAVNTLEVQNILVIGHSDCGGIQALMRMQDDVDSRQSL 177
NVANLVPP + + T AA+E+AV L+V NI+VIGHS CGGI+ L+ D
Sbjct: 75 NVANLVPPYDQAKYAGTGAAIEYAVLHLKVSNIVVIGHSACGGIKGLLSFPFDGTYSTDF 134
Query: 178 TENWVVNAKVAKFRTKAYTAHLSFDQQCRHCEKESISRSILNLLTYPWIEERVRKELLFI 237
E WV AK + KA F + C HCEKE+++ S+ NLLTYP++ E + + L +
Sbjct: 135 IEEWVKIGLPAKAKVKAQHGDAPFAELCTHCEKEAVNASLGNLLTYPFVREGLVNKTLAL 194
Query: 238 HGGYYDLLNCTFEKWTLDY 256
GGYYD + +FE W L++
Sbjct: 195 KGGYYDFVKGSFELWGLEF 213
>pdb|3E3G|A Chain A, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a
pdb|3E3G|B Chain B, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a
pdb|3E3G|C Chain C, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a
pdb|3E3G|D Chain D, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a
pdb|3E3G|E Chain E, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a
pdb|3E3G|F Chain F, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a
pdb|3E3I|A Chain A, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a With
100 Mm Bicarbonate
pdb|3E3I|B Chain B, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a With
100 Mm Bicarbonate
pdb|3E3I|C Chain C, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a With
100 Mm Bicarbonate
pdb|3E3I|D Chain D, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a With
100 Mm Bicarbonate
pdb|3E3I|E Chain E, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a With
100 Mm Bicarbonate
pdb|3E3I|F Chain F, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a With
100 Mm Bicarbonate
pdb|3E3I|G Chain G, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a With
100 Mm Bicarbonate
pdb|3E3I|H Chain H, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a With
100 Mm Bicarbonate
pdb|3E3I|I Chain I, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a With
100 Mm Bicarbonate
pdb|3E3I|J Chain J, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a With
100 Mm Bicarbonate
pdb|3E3I|K Chain K, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a With
100 Mm Bicarbonate
pdb|3E3I|L Chain L, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a With
100 Mm Bicarbonate
Length = 229
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 101/191 (52%), Gaps = 12/191 (6%)
Query: 58 FEEMKQRF---LSFKKNKYFEELEHFQNLAKAQSPKFMVIACADSRVCPSYILGLQPGET 114
+++KQ F S+ + E +F+ LA Q+P ++ IAC+DSRV + L+PGE
Sbjct: 1 MDKIKQLFANNYSWAQRMKEENSTYFKELADHQTPHYLWIACSDSRVPAEKLTNLEPGEL 60
Query: 115 FMIRNVANLVPPLENGPSETNAALEFAVNTLEVQNILVIGHSDCGGIQALMRMQDDVDSR 174
F+ RNVAN V + + +++AV+ L++++I++ GH++CGGI A M D
Sbjct: 61 FVHRNVANQVIHTD---FNCLSVVQYAVDVLKIEHIIICGHTNCGGIHAAM-----ADKD 112
Query: 175 QSLTENWVVNAKVAKFRTKAYTAHLSFDQQCRHCEKESISRSILNLLTYPWIEERV-RKE 233
L NW+++ + F+ LS +++ K +++ + NL ++ R +
Sbjct: 113 LGLINNWLLHIRDIWFKHGHLLGKLSPEKRADMLTKINVAEQVYNLGRTSIVKSAWERGQ 172
Query: 234 LLFIHGGYYDL 244
L +HG YD+
Sbjct: 173 KLSLHGWVYDV 183
>pdb|3E24|A Chain A, H. Influenzae Beta-Carbonic Anhydrase, Variant W39f
pdb|3E24|B Chain B, H. Influenzae Beta-Carbonic Anhydrase, Variant W39f
Length = 229
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 100/191 (52%), Gaps = 12/191 (6%)
Query: 58 FEEMKQRF---LSFKKNKYFEELEHFQNLAKAQSPKFMVIACADSRVCPSYILGLQPGET 114
+++KQ F S+ + E +F+ LA Q+P ++ I C+DSRV + L+PGE
Sbjct: 1 MDKIKQLFANNYSWAQRMKEENSTYFKELADHQTPHYLFIGCSDSRVPAEKLTNLEPGEL 60
Query: 115 FMIRNVANLVPPLENGPSETNAALEFAVNTLEVQNILVIGHSDCGGIQALMRMQDDVDSR 174
F+ RNVAN V + + +++AV+ L++++I++ GH++CGGI A M D
Sbjct: 61 FVHRNVANQVIHTD---FNCLSVVQYAVDVLKIEHIIICGHTNCGGIHAAM-----ADKD 112
Query: 175 QSLTENWVVNAKVAKFRTKAYTAHLSFDQQCRHCEKESISRSILNLLTYPWIEERV-RKE 233
L NW+++ + F+ LS +++ K +++ + NL ++ R +
Sbjct: 113 LGLINNWLLHIRDIWFKHGHLLGKLSPEKRADMLTKINVAEQVYNLGRTSIVKSAWERGQ 172
Query: 234 LLFIHGGYYDL 244
L +HG YD+
Sbjct: 173 KLSLHGWVYDV 183
>pdb|2A8C|A Chain A, Haemophilus Influenzae Beta-Carbonic Anhydrase
pdb|2A8C|B Chain B, Haemophilus Influenzae Beta-Carbonic Anhydrase
pdb|2A8C|C Chain C, Haemophilus Influenzae Beta-Carbonic Anhydrase
pdb|2A8C|D Chain D, Haemophilus Influenzae Beta-Carbonic Anhydrase
pdb|2A8C|E Chain E, Haemophilus Influenzae Beta-Carbonic Anhydrase
pdb|2A8C|F Chain F, Haemophilus Influenzae Beta-Carbonic Anhydrase
pdb|2A8D|A Chain A, Haemophilus Influenzae Beta-Carbonic Anhydrase Complexed
With Bicarbonate
pdb|2A8D|B Chain B, Haemophilus Influenzae Beta-Carbonic Anhydrase Complexed
With Bicarbonate
pdb|2A8D|C Chain C, Haemophilus Influenzae Beta-Carbonic Anhydrase Complexed
With Bicarbonate
pdb|2A8D|D Chain D, Haemophilus Influenzae Beta-Carbonic Anhydrase Complexed
With Bicarbonate
pdb|2A8D|E Chain E, Haemophilus Influenzae Beta-Carbonic Anhydrase Complexed
With Bicarbonate
pdb|2A8D|F Chain F, Haemophilus Influenzae Beta-Carbonic Anhydrase Complexed
With Bicarbonate
Length = 229
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 100/191 (52%), Gaps = 12/191 (6%)
Query: 58 FEEMKQRF---LSFKKNKYFEELEHFQNLAKAQSPKFMVIACADSRVCPSYILGLQPGET 114
+++KQ F S+ + E +F+ LA Q+P ++ I C+DSRV + L+PGE
Sbjct: 1 MDKIKQLFANNYSWAQRMKEENSTYFKELADHQTPHYLWIGCSDSRVPAEKLTNLEPGEL 60
Query: 115 FMIRNVANLVPPLENGPSETNAALEFAVNTLEVQNILVIGHSDCGGIQALMRMQDDVDSR 174
F+ RNVAN V + + +++AV+ L++++I++ GH++CGGI A M D
Sbjct: 61 FVHRNVANQVIHTD---FNCLSVVQYAVDVLKIEHIIICGHTNCGGIHAAM-----ADKD 112
Query: 175 QSLTENWVVNAKVAKFRTKAYTAHLSFDQQCRHCEKESISRSILNLLTYPWIEERV-RKE 233
L NW+++ + F+ LS +++ K +++ + NL ++ R +
Sbjct: 113 LGLINNWLLHIRDIWFKHGHLLGKLSPEKRADMLTKINVAEQVYNLGRTSIVKSAWERGQ 172
Query: 234 LLFIHGGYYDL 244
L +HG YD+
Sbjct: 173 KLSLHGWVYDV 183
>pdb|3MF3|A Chain A, Cobalt(Ii)-Substituted Haemophilus Influenzae B-Carbonic
Anhydrase
pdb|3MF3|B Chain B, Cobalt(Ii)-Substituted Haemophilus Influenzae B-Carbonic
Anhydrase
pdb|3MF3|C Chain C, Cobalt(Ii)-Substituted Haemophilus Influenzae B-Carbonic
Anhydrase
pdb|3MF3|D Chain D, Cobalt(Ii)-Substituted Haemophilus Influenzae B-Carbonic
Anhydrase
pdb|3MF3|E Chain E, Cobalt(Ii)-Substituted Haemophilus Influenzae B-Carbonic
Anhydrase
pdb|3MF3|F Chain F, Cobalt(Ii)-Substituted Haemophilus Influenzae B-Carbonic
Anhydrase
Length = 221
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 100/191 (52%), Gaps = 12/191 (6%)
Query: 58 FEEMKQRF---LSFKKNKYFEELEHFQNLAKAQSPKFMVIACADSRVCPSYILGLQPGET 114
+++KQ F S+ + E +F+ LA Q+P ++ I C+DSRV + L+PGE
Sbjct: 1 MDKIKQLFANNYSWAQRMKEENSTYFKELADHQTPHYLWIGCSDSRVPAEKLTNLEPGEL 60
Query: 115 FMIRNVANLVPPLENGPSETNAALEFAVNTLEVQNILVIGHSDCGGIQALMRMQDDVDSR 174
F+ RNVAN V + + +++AV+ L++++I++ GH++CGGI A M D
Sbjct: 61 FVHRNVANQVIHTD---FNCLSVVQYAVDVLKIEHIIICGHTNCGGIHAAM-----ADKD 112
Query: 175 QSLTENWVVNAKVAKFRTKAYTAHLSFDQQCRHCEKESISRSILNLLTYPWIEERV-RKE 233
L NW+++ + F+ LS +++ K +++ + NL ++ R +
Sbjct: 113 LGLINNWLLHIRDIWFKHGHLLGKLSPEKRADMLTKINVAEQVYNLGRTSIVKSAWERGQ 172
Query: 234 LLFIHGGYYDL 244
L +HG YD+
Sbjct: 173 KLSLHGWVYDV 183
>pdb|1I6P|A Chain A, Crystal Structure Of E. Coli Beta Carbonic Anhydrase
(Ecca)
pdb|1T75|A Chain A, Crystal Structure Of Escherichia Coli Beta Carbonic
Anhydrase
pdb|1T75|B Chain B, Crystal Structure Of Escherichia Coli Beta Carbonic
Anhydrase
pdb|1T75|D Chain D, Crystal Structure Of Escherichia Coli Beta Carbonic
Anhydrase
pdb|1T75|E Chain E, Crystal Structure Of Escherichia Coli Beta Carbonic
Anhydrase
pdb|2ESF|A Chain A, Identification Of A Novel Non-catalytic Bicarbonate
Binding Site In Eubacterial Beta-carbonic Anhydrase
pdb|2ESF|B Chain B, Identification Of A Novel Non-catalytic Bicarbonate
Binding Site In Eubacterial Beta-carbonic Anhydrase
Length = 220
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 100/199 (50%), Gaps = 18/199 (9%)
Query: 80 FQNLAKAQSPKFMVIACADSRVCPSYILGLQPGETFMIRNVANLVPPLENGPSETNAALE 139
F+ LA+AQ P+F+ I C+DSRV + GL+PGE F+ RNVANLV + + ++
Sbjct: 26 FEKLAQAQKPRFLWIGCSDSRVPAERLTGLEPGELFVHRNVANLVIHTD---LNCLSVVQ 82
Query: 140 FAVNTLEVQNILVIGHSDCGGIQALMRMQDDVDSRQSLTENWVVNAKVAKFRTKAYTAHL 199
+AV+ LEV++I++ GH CGG+QA + + L NW+++ + F+ + +
Sbjct: 83 YAVDVLEVEHIIICGHYGCGGVQAAVE-----NPELGLINNWLLHIRDIWFKHSSLLGEM 137
Query: 200 SFDQQCRHCEKESISRSILNL-----LTYPWIEERVRKELLFIHGGYYDLLNCTFEKWTL 254
+++ + ++ + NL + W R + + IHG Y + + +
Sbjct: 138 PQERRLDTLCELNVMEQVYNLGHSTIMQSAW----KRGQKVTIHGWAYGIHDGLLRDLDV 193
Query: 255 DYKGRKVDEEEVGRHSIKD 273
R+ E+ RH I +
Sbjct: 194 TATNRETLEQRY-RHGISN 211
>pdb|3UCJ|A Chain A, Coccomyxa Beta-Carbonic Anhydrase In Complex With
Acetazolamide
pdb|3UCJ|B Chain B, Coccomyxa Beta-Carbonic Anhydrase In Complex With
Acetazolamide
pdb|3UCK|A Chain A, Coccomyxa Beta-Carbonic Anhydrase In Complex With
Phosphate
pdb|3UCK|B Chain B, Coccomyxa Beta-Carbonic Anhydrase In Complex With
Phosphate
pdb|3UCM|A Chain A, Coccomyxa Beta-Carbonic Anhydrase In Complex With
Thiocyanate
pdb|3UCM|B Chain B, Coccomyxa Beta-Carbonic Anhydrase In Complex With
Thiocyanate
pdb|3UCN|A Chain A, Coccomyxa Beta-Carbonic Anhydrase In Complex With Azide
pdb|3UCN|B Chain B, Coccomyxa Beta-Carbonic Anhydrase In Complex With Azide
pdb|3UCO|A Chain A, Coccomyxa Beta-Carbonic Anhydrase In Complex With Iodide
pdb|3UCO|B Chain B, Coccomyxa Beta-Carbonic Anhydrase In Complex With Iodide
Length = 227
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 97/201 (48%), Gaps = 8/201 (3%)
Query: 79 HFQNLAKAQSPKFMVIACADSRVCPSYILGLQPGETFMIRNVANLVPPLENGPSETNAAL 138
+F +A +Q+P+++ I CADSRV P+ + + PGE F+ RNV NLV N + L
Sbjct: 30 YFSKVAGSQAPEYLYIGCADSRVSPAQLFNMAPGEVFVQRNVGNLV---SNKDLNCMSCL 86
Query: 139 EFAVNTLEVQNILVIGHSDCGGIQALMRMQDDVDSRQSLTENWVVNAKVAKFRTKAYTAH 198
E+ V+ L++++ILV GH +CG +A + +T W+ + + + + A
Sbjct: 87 EYTVDHLKIKHILVCGHYNCGACKAGLVWHPKT---AGVTNLWISDVREVRDKNAAKLHG 143
Query: 199 LSFDQQCRHCEKESISRSILNLLTYPWIEER-VRKELLFIHGGYYDLLNCTFEKWTLDYK 257
LS D + ++ + N+ P ++ R + L +HG Y ++
Sbjct: 144 LSADDAWDKMVELNVEAQVFNVCASPIVQAAWARGQPLSVHGIVYTPGTGLVKELIKPIT 203
Query: 258 GRKVDEEEVGRHSIKDHSFWS 278
G + D + R +K H F+S
Sbjct: 204 GME-DAGALLRADLKQHCFFS 223
>pdb|3QY1|A Chain A, 1.54a Resolution Crystal Structure Of A Beta-Carbonic
Anhydrase From Salmonella Enterica Subsp. Enterica
Serovar Typhimurium Str. Lt2
pdb|3QY1|B Chain B, 1.54a Resolution Crystal Structure Of A Beta-Carbonic
Anhydrase From Salmonella Enterica Subsp. Enterica
Serovar Typhimurium Str. Lt2
Length = 223
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 82/143 (57%), Gaps = 12/143 (8%)
Query: 80 FQNLAKAQSPKFMVIACADSRVCPSYILGLQPGETFMIRNVANLVPPLENGPSETN--AA 137
F+ LA+AQ P+F+ I C+DSRV + GL+PGE F+ RNVANLV ++ N +
Sbjct: 29 FEKLAQAQKPRFLWIGCSDSRVPAERLTGLEPGELFVHRNVANLVI-----HTDLNCLSV 83
Query: 138 LEFAVNTLEVQNILVIGHSDCGGIQALMRMQDDVDSRQSLTENWVVNAKVAKFRTKAYTA 197
+++AV+ LEV++I++ GHS CGGI+A + + L NW+++ + + +
Sbjct: 84 VQYAVDVLEVEHIIICGHSGCGGIKAAVE-----NPELGLINNWLLHIRDIWLKHSSLLG 138
Query: 198 HLSFDQQCRHCEKESISRSILNL 220
+ +Q+ + ++ + NL
Sbjct: 139 KMPEEQRLDALYELNVMEQVYNL 161
>pdb|3E28|A Chain A, H. Influenzae Beta-carbonic Anhydrase, Variant Y181f
pdb|3E28|B Chain B, H. Influenzae Beta-carbonic Anhydrase, Variant Y181f
pdb|3E28|C Chain C, H. Influenzae Beta-carbonic Anhydrase, Variant Y181f
pdb|3E28|D Chain D, H. Influenzae Beta-carbonic Anhydrase, Variant Y181f
pdb|3E28|E Chain E, H. Influenzae Beta-carbonic Anhydrase, Variant Y181f
pdb|3E28|F Chain F, H. Influenzae Beta-carbonic Anhydrase, Variant Y181f
pdb|3E2A|A Chain A, H. Influenzae Beta-Carbonic Anhydrase, Variant Y181f With
100 Mm Bicarbonate
pdb|3E2A|B Chain B, H. Influenzae Beta-Carbonic Anhydrase, Variant Y181f With
100 Mm Bicarbonate
pdb|3E2A|C Chain C, H. Influenzae Beta-Carbonic Anhydrase, Variant Y181f With
100 Mm Bicarbonate
pdb|3E2A|D Chain D, H. Influenzae Beta-Carbonic Anhydrase, Variant Y181f With
100 Mm Bicarbonate
pdb|3E2A|E Chain E, H. Influenzae Beta-Carbonic Anhydrase, Variant Y181f With
100 Mm Bicarbonate
pdb|3E2A|F Chain F, H. Influenzae Beta-Carbonic Anhydrase, Variant Y181f With
100 Mm Bicarbonate
pdb|3E2W|A Chain A, H. Influenzae Beta-Carbonic Anhydrase, Variant Y181f With
1m Bicarbonate
pdb|3E2W|B Chain B, H. Influenzae Beta-Carbonic Anhydrase, Variant Y181f With
1m Bicarbonate
pdb|3E2W|C Chain C, H. Influenzae Beta-Carbonic Anhydrase, Variant Y181f With
1m Bicarbonate
pdb|3E2W|D Chain D, H. Influenzae Beta-Carbonic Anhydrase, Variant Y181f With
1m Bicarbonate
pdb|3E2W|E Chain E, H. Influenzae Beta-Carbonic Anhydrase, Variant Y181f With
1m Bicarbonate
pdb|3E2W|F Chain F, H. Influenzae Beta-Carbonic Anhydrase, Variant Y181f With
1m Bicarbonate
Length = 229
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 100/191 (52%), Gaps = 12/191 (6%)
Query: 58 FEEMKQRF---LSFKKNKYFEELEHFQNLAKAQSPKFMVIACADSRVCPSYILGLQPGET 114
+++KQ F S+ + E +F+ LA Q+P ++ I C+DSRV + L+PGE
Sbjct: 1 MDKIKQLFANNYSWAQRMKEENSTYFKELADHQTPHYLWIGCSDSRVPAEKLTNLEPGEL 60
Query: 115 FMIRNVANLVPPLENGPSETNAALEFAVNTLEVQNILVIGHSDCGGIQALMRMQDDVDSR 174
F+ RNVAN V + + +++AV+ L++++I++ GH++CGGI A M D
Sbjct: 61 FVHRNVANQVIHTD---FNCLSVVQYAVDVLKIEHIIICGHTNCGGIHAAM-----ADKD 112
Query: 175 QSLTENWVVNAKVAKFRTKAYTAHLSFDQQCRHCEKESISRSILNLLTYPWIEERV-RKE 233
L NW+++ + F+ LS +++ K +++ + NL ++ R +
Sbjct: 113 LGLINNWLLHIRDIWFKHGHLLGKLSPEKRADMLTKINVAEQVYNLGRTSIVKSAWERGQ 172
Query: 234 LLFIHGGYYDL 244
L +HG +D+
Sbjct: 173 KLSLHGWVFDV 183
>pdb|1I6O|A Chain A, Crystal Structure Of E. Coli Beta Carbonic Anhydrase
(Ecca)
pdb|1I6O|B Chain B, Crystal Structure Of E. Coli Beta Carbonic Anhydrase
(Ecca)
Length = 220
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 69/112 (61%), Gaps = 8/112 (7%)
Query: 80 FQNLAKAQSPKFMVIACADSRVCPSYILGLQPGETFMIRNVANLVPPLENGPSETNAALE 139
F+ LA+AQ P+F+ I C+DSRV + GL+PGE F+ RNVANLV + + ++
Sbjct: 26 FEKLAQAQKPRFLWIGCSDSRVPAERLTGLEPGELFVHRNVANLVIHTD---LNCLSVVQ 82
Query: 140 FAVNTLEVQNILVIGHSDCGGIQALMRMQDDVDSRQSLTENWVVNAKVAKFR 191
+AV+ LEV++I++ GH CGG+QA + + L NW+++ + F+
Sbjct: 83 YAVDVLEVEHIIICGHYGCGGVQAAVE-----NPELGLINNWLLHIRDIWFK 129
>pdb|3E2X|A Chain A, H. Influenzae Beta-Carbonic Anhydrase, Variant V47a
pdb|3E2X|B Chain B, H. Influenzae Beta-Carbonic Anhydrase, Variant V47a
pdb|3E31|A Chain A, H. Influenzae Beta-Carbonic Anhydrase, Variant V47a
pdb|3E31|B Chain B, H. Influenzae Beta-Carbonic Anhydrase, Variant V47a
pdb|3E3F|A Chain A, H. Influenzae Beta-carbonic Anhydrase, Variant V47a With
100 Mm Bicarbonate
pdb|3E3F|B Chain B, H. Influenzae Beta-carbonic Anhydrase, Variant V47a With
100 Mm Bicarbonate
Length = 229
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 99/191 (51%), Gaps = 12/191 (6%)
Query: 58 FEEMKQRF---LSFKKNKYFEELEHFQNLAKAQSPKFMVIACADSRVCPSYILGLQPGET 114
+++KQ F S+ + E +F+ LA Q+P ++ I C+DSR + L+PGE
Sbjct: 1 MDKIKQLFANNYSWAQRMKEENSTYFKELADHQTPHYLWIGCSDSRAPAEKLTNLEPGEL 60
Query: 115 FMIRNVANLVPPLENGPSETNAALEFAVNTLEVQNILVIGHSDCGGIQALMRMQDDVDSR 174
F+ RNVAN V + + +++AV+ L++++I++ GH++CGGI A M D
Sbjct: 61 FVHRNVANQVIHTD---FNCLSVVQYAVDVLKIEHIIICGHTNCGGIHAAM-----ADKD 112
Query: 175 QSLTENWVVNAKVAKFRTKAYTAHLSFDQQCRHCEKESISRSILNLLTYPWIEERV-RKE 233
L NW+++ + F+ LS +++ K +++ + NL ++ R +
Sbjct: 113 LGLINNWLLHIRDIWFKHGHLLGKLSPEKRADMLTKINVAEQVYNLGRTSIVKSAWERGQ 172
Query: 234 LLFIHGGYYDL 244
L +HG YD+
Sbjct: 173 KLSLHGWVYDV 183
>pdb|3E1V|A Chain A, H. Influenzae Beta-Carbonic Anhydrase, Variant D44n
pdb|3E1V|B Chain B, H. Influenzae Beta-Carbonic Anhydrase, Variant D44n
pdb|3E1W|A Chain A, H. Influenzae Beta-carbonic Anhydrase, Variant D44n In 100
Mm Sodium Bicarbonate
pdb|3E1W|B Chain B, H. Influenzae Beta-carbonic Anhydrase, Variant D44n In 100
Mm Sodium Bicarbonate
Length = 229
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 100/191 (52%), Gaps = 12/191 (6%)
Query: 58 FEEMKQRF---LSFKKNKYFEELEHFQNLAKAQSPKFMVIACADSRVCPSYILGLQPGET 114
+++KQ F S+ + E +F+ LA Q+P ++ I C++SRV + L+PGE
Sbjct: 1 MDKIKQLFANNYSWAQRMKEENSTYFKELADHQTPHYLWIGCSNSRVPAEKLTNLEPGEL 60
Query: 115 FMIRNVANLVPPLENGPSETNAALEFAVNTLEVQNILVIGHSDCGGIQALMRMQDDVDSR 174
F+ RNVAN V + + +++AV+ L++++I++ GH++CGGI A M D
Sbjct: 61 FVHRNVANQVIHTD---FNCLSVVQYAVDVLKIEHIIICGHTNCGGIHAAM-----ADKD 112
Query: 175 QSLTENWVVNAKVAKFRTKAYTAHLSFDQQCRHCEKESISRSILNLLTYPWIEERV-RKE 233
L NW+++ + F+ LS +++ K +++ + NL ++ R +
Sbjct: 113 LGLINNWLLHIRDIWFKHGHLLGKLSPEKRADMLTKINVAEQVYNLGRTSIVKSAWERGQ 172
Query: 234 LLFIHGGYYDL 244
L +HG YD+
Sbjct: 173 KLSLHGWVYDV 183
>pdb|2W3Q|A Chain A, Structure And Inhibition Of The Co2-Sensing Carbonic
Anhydrase Can2 From The Pathogenic Fungus Cryptococcus
Neoformans
Length = 243
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 25/200 (12%)
Query: 58 FEEMKQRFLSFKKNKYF------EELEHFQNLAKAQSPKFMVIACADSRVCPSYILGLQP 111
F+E+++ + N+Y+ EE E K Q+P F+ I CADSRV I+ +P
Sbjct: 31 FKEIRE---VLEGNRYWARKVTSEEPEFMAEQVKGQAPNFLWIGCADSRVPEVTIMARKP 87
Query: 112 GETFMIRNVANLVPPLENGPSETNAALEFAVNTLEVQNILVIGHSDCGGIQALMRMQDDV 171
G+ F+ RNVAN P ++ + A L +A+ + V +++V+GH+ CGG A
Sbjct: 88 GDVFVQRNVANQFKPEDD---SSQALLNYAIMNVGVTHVMVVGHTGCGGCIAAF------ 138
Query: 172 DSRQSLTENWVVNAKVAKFRTKAYTAH-LSFDQQCRHCEKESISRSILNLLTYPWIE--- 227
D EN V H L KE++ ++ N++ P I+
Sbjct: 139 DQPLPTEENPGGTPLVRYLEPIIRLKHSLPEGSDVNDLIKENVKMAVKNVVNSPTIQGAW 198
Query: 228 ERVRK---ELLFIHGGYYDL 244
E+ RK +F+HG YDL
Sbjct: 199 EQARKGEFREVFVHGWLYDL 218
>pdb|2W3N|A Chain A, Structure And Inhibition Of The Co2-Sensing Carbonic
Anhydrase Can2 From The Pathogenic Fungus Cryptococcus
Neoformans
pdb|2W3N|B Chain B, Structure And Inhibition Of The Co2-Sensing Carbonic
Anhydrase Can2 From The Pathogenic Fungus Cryptococcus
Neoformans
pdb|2W3N|C Chain C, Structure And Inhibition Of The Co2-Sensing Carbonic
Anhydrase Can2 From The Pathogenic Fungus Cryptococcus
Neoformans
Length = 239
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 25/200 (12%)
Query: 58 FEEMKQRFLSFKKNKYF------EELEHFQNLAKAQSPKFMVIACADSRVCPSYILGLQP 111
F+E+++ + N+Y+ EE E K Q+P F+ I CADSRV I+ +P
Sbjct: 27 FKEIRE---VLEGNRYWARKVTSEEPEFMAEQVKGQAPNFLWIGCADSRVPEVTIMARKP 83
Query: 112 GETFMIRNVANLVPPLENGPSETNAALEFAVNTLEVQNILVIGHSDCGGIQALMRMQDDV 171
G+ F+ RNVAN P ++ + A L +A+ + V +++V+GH+ CGG A
Sbjct: 84 GDVFVQRNVANQFKPEDD---SSQALLNYAIMNVGVTHVMVVGHTGCGGCIAAF------ 134
Query: 172 DSRQSLTENWVVNAKVAKFRTKAYTAH-LSFDQQCRHCEKESISRSILNLLTYPWIE--- 227
D EN V H L KE++ ++ N++ P I+
Sbjct: 135 DQPLPTEENPGGTPLVRYLEPIIRLKHSLPEGSDVNDLIKENVKMAVKNVVNSPTIQGAW 194
Query: 228 ERVRK---ELLFIHGGYYDL 244
E+ RK +F+HG YDL
Sbjct: 195 EQARKGEFREVFVHGWLYDL 214
>pdb|1DDZ|A Chain A, X-Ray Structure Of A Beta-Carbonic Anhydrase From The Red
Alga, Porphyridium Purpureum R-1
pdb|1DDZ|B Chain B, X-Ray Structure Of A Beta-Carbonic Anhydrase From The Red
Alga, Porphyridium Purpureum R-1
Length = 496
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 8/116 (6%)
Query: 67 SFKKNKYFEELEHFQNLAKAQSPKFMVIACADSRVCPSYILGLQPGETFMIRNVANLVPP 126
++++ ++ E F LA QSP+++ I CADSRV + +L L GE F+ RN+AN
Sbjct: 45 AWRQEMLKQDPEFFNRLANGQSPEYLWIGCADSRVPANQLLDLPAGEVFVHRNIAN---Q 101
Query: 127 LENGPSETNAALEFAVNTLEVQNILVIGHSDCGGIQALMRMQDDVDSRQSLTENWV 182
+ + L++AV L+V++ILV GH CGG +A + DSR L +NW+
Sbjct: 102 CIHSDISFLSVLQYAVQYLKVKHILVCGHYGCGGAKAALG-----DSRLGLIDNWL 152
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 69/126 (54%), Gaps = 8/126 (6%)
Query: 75 EELEHFQNLAKAQSPKFMVIACADSRVCPSYILGLQPGETFMIRNVANLVPPLENGPSET 134
++ + F NLA Q+P+ + I CADSRV + I+ L GE F+ RN+AN +
Sbjct: 307 QDPQFFSNLAHTQTPEILWIGCADSRVPANQIINLPAGEVFVHRNIAN---QCIHSDMSF 363
Query: 135 NAALEFAVNTLEVQNILVIGHSDCGGIQALMRMQDDVDSRQSLTENWVVNAKVAKFRTKA 194
+ L++AV L+V+ ++V GH CGG A + DSR L +NW+ + + + +A
Sbjct: 364 LSVLQYAVQYLKVKRVVVCGHYACGGCAAALG-----DSRLGLIDNWLRHIRDVRRHNQA 418
Query: 195 YTAHLS 200
+ ++
Sbjct: 419 ELSRIT 424
>pdb|3EYX|A Chain A, Crystal Structure Of Carbonic Anhydrase Nce103 From
Saccharomyces Cerevisiae
pdb|3EYX|B Chain B, Crystal Structure Of Carbonic Anhydrase Nce103 From
Saccharomyces Cerevisiae
Length = 216
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 84/177 (47%), Gaps = 33/177 (18%)
Query: 84 AKAQSPKFMVIACADSRVCPSYILGLQPGETFMIRNVANLVPPLENGPSETNAALEFAVN 143
AK QSP + I C+DSR + LG+ PGE F +NVAN+ + A LEFA+
Sbjct: 40 AKGQSPHTLFIGCSDSRYNEN-CLGVLPGEVFTWKNVANIC---HSEDLTLKATLEFAII 95
Query: 144 TLEVQNILVIGHSDCGGIQALMRMQ----------------DDVDSRQSLTENWVVNAKV 187
L+V +++ GH+DCGGI+ + Q DD+D+ +++ K
Sbjct: 96 CLKVNKVIICGHTDCGGIKTCLTNQREALPKVNCSHLYKYLDDIDTMYHEESQNLIHLKT 155
Query: 188 AKFRTKAYTAHLSFDQQCRHCEKESISRSILNLLTYPWIEERVRKELLFIHGGYYDL 244
+ ++ Y +H + +Q +R I N P ++ V+ L ++G Y++
Sbjct: 156 QREKSH-YLSHCNVKRQ--------FNRIIEN----PTVQTAVQNGELQVYGLLYNV 199
>pdb|2A5V|A Chain A, Crystal Structure Of M. Tuberculosis Beta Carbonic
Anhydrase, Rv3588c, Tetrameric Form
pdb|2A5V|B Chain B, Crystal Structure Of M. Tuberculosis Beta Carbonic
Anhydrase, Rv3588c, Tetrameric Form
pdb|2A5V|C Chain C, Crystal Structure Of M. Tuberculosis Beta Carbonic
Anhydrase, Rv3588c, Tetrameric Form
pdb|2A5V|D Chain D, Crystal Structure Of M. Tuberculosis Beta Carbonic
Anhydrase, Rv3588c, Tetrameric Form
Length = 213
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 6/113 (5%)
Query: 58 FEEMKQRFLSFKKNKYFEELEHFQNLAKAQSPKFMVIACADSRVCPSYILGLQPGETFMI 117
+E +RF++ + + ++H LA Q P ++ CADSRV I G+ F++
Sbjct: 19 LKEGNERFVAGRPQHPSQSVDHRAGLAAGQKPTAVIFGCADSRVAAEIIFDQGLGDMFVV 78
Query: 118 RNVANLVPPLENGPSETNAALEFAVNTLEVQNILVIGHSDCGGIQALMRMQDD 170
R +++ S ++E+AV L V I+V+GH CG + A + +D
Sbjct: 79 RTAGHVI------DSAVLGSIEYAVTVLNVPLIVVLGHDSCGAVNAALAAIND 125
>pdb|1YM3|A Chain A, Crystal Structure Of Carbonic Anhydrase Rv3588c From
Mycobacterium Tuberculosis
Length = 215
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 6/113 (5%)
Query: 58 FEEMKQRFLSFKKNKYFEELEHFQNLAKAQSPKFMVIACADSRVCPSYILGLQPGETFMI 117
+E +RF++ + + ++H LA Q P ++ CADSRV I G+ F++
Sbjct: 21 LKEGNERFVAGRPQHPSQSVDHRAGLAAGQKPTAVIFGCADSRVAAEIIFDQGLGDMFVV 80
Query: 118 RNVANLVPPLENGPSETNAALEFAVNTLEVQNILVIGHSDCGGIQALMRMQDD 170
R +++ S ++E+AV L V I+V+GH CG + A + +D
Sbjct: 81 RTAGHVI------DSAVLGSIEYAVTVLNVPLIVVLGHDSCGAVNAALAAIND 127
>pdb|1G5C|A Chain A, Crystal Structure Of The 'cab' Type Beta Class Carbonic
Anhydrase From Methanobacterium Thermoautotrophicum
pdb|1G5C|B Chain B, Crystal Structure Of The 'cab' Type Beta Class Carbonic
Anhydrase From Methanobacterium Thermoautotrophicum
pdb|1G5C|C Chain C, Crystal Structure Of The 'cab' Type Beta Class Carbonic
Anhydrase From Methanobacterium Thermoautotrophicum
pdb|1G5C|D Chain D, Crystal Structure Of The 'cab' Type Beta Class Carbonic
Anhydrase From Methanobacterium Thermoautotrophicum
pdb|1G5C|E Chain E, Crystal Structure Of The 'cab' Type Beta Class Carbonic
Anhydrase From Methanobacterium Thermoautotrophicum
pdb|1G5C|F Chain F, Crystal Structure Of The 'cab' Type Beta Class Carbonic
Anhydrase From Methanobacterium Thermoautotrophicum
Length = 170
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 58/107 (54%), Gaps = 17/107 (15%)
Query: 68 FKKNKYFEELEHFQNLAKAQ-SPKFMVIACADSRVCP--SYILGLQPGETFMIRNVANLV 124
++N+ F F++L+ + SPK +I C DSR+ LG+ G+ +I+N N+V
Sbjct: 7 LRENQDF----RFRDLSDLKHSPKLCIITCMDSRLIDLLERALGIGRGDAKVIKNAGNIV 62
Query: 125 PPLENGPSETNAALEFAVNTLEVQNILVIGHSDCGGIQALMRMQDDV 171
++G + A +A+ E I+++GH+DCG + R+ +D+
Sbjct: 63 ---DDGVIRSAAVAIYALGDNE---IIIVGHTDCG----MARLDEDL 99
>pdb|3TEO|A Chain A, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
pdb|3TEO|B Chain B, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
pdb|3TEO|C Chain C, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
pdb|3TEO|D Chain D, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
pdb|3TEO|E Chain E, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
pdb|3TEO|F Chain F, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
pdb|3TEO|G Chain G, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
pdb|3TEO|H Chain H, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
pdb|3TEO|I Chain I, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
pdb|3TEO|J Chain J, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
pdb|3TEO|K Chain K, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
pdb|3TEO|L Chain L, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
pdb|3TEO|M Chain M, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
pdb|3TEO|N Chain N, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
pdb|3TEO|O Chain O, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
pdb|3TEO|P Chain P, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
Length = 204
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 12/76 (15%)
Query: 90 KFMVIACADSRVCPSYILGLQPGETFMIRNVANLVPPLENGPSETNAALEFA---VNTLE 146
+ V+ C D RV LG+QP + + RN +V T+ A+ A N
Sbjct: 29 RLWVLTCXDERVHIEQSLGIQPDDAHIYRNAGGIV---------TDDAIRSASLTTNFFG 79
Query: 147 VQNILVIGHSDCGGIQ 162
+ I+V+ H+DCG ++
Sbjct: 80 TKEIIVVTHTDCGXLR 95
>pdb|3TEN|A Chain A, Holo Form Of Carbon Disulfide Hydrolase
pdb|3TEN|B Chain B, Holo Form Of Carbon Disulfide Hydrolase
pdb|3TEN|C Chain C, Holo Form Of Carbon Disulfide Hydrolase
pdb|3TEN|D Chain D, Holo Form Of Carbon Disulfide Hydrolase
pdb|3TEN|E Chain E, Holo Form Of Carbon Disulfide Hydrolase
pdb|3TEN|F Chain F, Holo Form Of Carbon Disulfide Hydrolase
pdb|3TEN|G Chain G, Holo Form Of Carbon Disulfide Hydrolase
pdb|3TEN|H Chain H, Holo Form Of Carbon Disulfide Hydrolase
Length = 204
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 6/73 (8%)
Query: 90 KFMVIACADSRVCPSYILGLQPGETFMIRNVANLVPPLENGPSETNAALEFAVNTLEVQN 149
+ V+ C D RV LG+QP + + RN +V + + N +
Sbjct: 29 RLWVLTCMDERVHIEQSLGIQPDDAHIYRNAGGIV------TDDAIRSASLTTNFFGTKE 82
Query: 150 ILVIGHSDCGGIQ 162
I+V+ H+DCG ++
Sbjct: 83 IIVVTHTDCGMLR 95
>pdb|3LAS|A Chain A, Crystal Structure Of Carbonic Anhydrase From Streptococcus
Mutans To 1.4 Angstrom Resolution
pdb|3LAS|B Chain B, Crystal Structure Of Carbonic Anhydrase From Streptococcus
Mutans To 1.4 Angstrom Resolution
Length = 166
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 6/93 (6%)
Query: 68 FKKNKYFEELEHFQNLAKAQSPKFMVIACADSRVCPSYILGLQPGETFMIRNVANLVPPL 127
K N+ + +L +L + ++ C DSR+ + LGL G+ ++RN V
Sbjct: 10 IKANQAYVDLHGTAHLPLKPKTRVAIVTCMDSRLHVAPALGLALGDAHILRNAGGRV--- 66
Query: 128 ENGPSETNAALEFAVNTLEVQNILVIGHSDCGG 160
+ +L + L I+V+ H+DCG
Sbjct: 67 ---TDDVIRSLVISEQQLGTSEIVVLHHTDCGA 96
>pdb|3VQJ|A Chain A, Crystal Structutre Of Thiobacillus Thioparus Thi115
Carbonyl Sulfide Hydrolase
pdb|3VRK|A Chain A, Crystal Structutre Of Thiobacillus Thioparus Thi115
Carbonyl Sulfide Hydrolase / Thiocyanate Complex
Length = 219
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 78/187 (41%), Gaps = 25/187 (13%)
Query: 88 SPKFMVIACADSRVCPSYILGLQPGETFMIRNVANLVPPLENGPSETNAALEFAVNTLEV 147
S + V+AC D+R+ +LGLQ GE +IRN ++ + L + + L
Sbjct: 36 SRRVAVVACMDARLDVEDLLGLQTGEAHIIRNAGGVI------NEDAIRCLIISHHLLNT 89
Query: 148 QNILVIGHSDCGGI---QALMR--MQDDVDSRQSL---TENWVVNAKVAKFRTKAYTAHL 199
I+++ H+ CG + L+R ++ D + + + T V+A A A+ A
Sbjct: 90 HEIILVHHTRCGMLAFTDDLLRAGLEGDAAAEKLIGQATGRAFVSAGKASASPAAFQAFR 149
Query: 200 S----FDQQCRHCEKESIS----RSILNLLTYPWIEERVRKELLFIHGGYYDLLNCTFEK 251
D E I+ R + +L +PW+ + + + G YD+ E+
Sbjct: 150 GPPEPLDAPRSDASTERIAADVRRGLSIILNHPWLPT-AGPDAITVRGFIYDVDTGRLEE 208
Query: 252 WTLDYKG 258
+ Y G
Sbjct: 209 --VSYPG 213
>pdb|1YLK|A Chain A, Crystal Structure Of Rv1284 From Mycobacterium
Tuberculosis In Complex With Thiocyanate
pdb|1YLK|B Chain B, Crystal Structure Of Rv1284 From Mycobacterium
Tuberculosis In Complex With Thiocyanate
pdb|1YLK|C Chain C, Crystal Structure Of Rv1284 From Mycobacterium
Tuberculosis In Complex With Thiocyanate
pdb|1YLK|D Chain D, Crystal Structure Of Rv1284 From Mycobacterium
Tuberculosis In Complex With Thiocyanate
Length = 172
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 6/77 (7%)
Query: 83 LAKAQSPKFMVIACADSRVCPSYILGLQPGETFMIRNVANLVPPLENGPSETNAALEFAV 142
L S ++AC D+R+ +LG++ GE +IRN +V + +L +
Sbjct: 31 LPMPPSKHIAIVACMDARLDVYRMLGIKEGEAHVIRNAGCVV------TDDVIRSLAISQ 84
Query: 143 NTLEVQNILVIGHSDCG 159
L + I+++ H+DCG
Sbjct: 85 RLLGTREIILLHHTDCG 101
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.135 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,553,957
Number of Sequences: 62578
Number of extensions: 275767
Number of successful extensions: 679
Number of sequences better than 100.0: 24
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 630
Number of HSP's gapped (non-prelim): 25
length of query: 278
length of database: 14,973,337
effective HSP length: 98
effective length of query: 180
effective length of database: 8,840,693
effective search space: 1591324740
effective search space used: 1591324740
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)