Citrus Sinensis ID: 023745

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------28
Protein Sequence
MAVSYSQCVQSLKVSLTGSDRCRDNDMKRNCLVFASSTESNSNPVLQSKVDRLLDSVKWDNKGLAVAIAQNVDTGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSVLDALKDQPVQGNNLAMTTLYSLESTISQRKAASKNGKPSWTKRLLLDSKLLCSKIREEADELCRTLEENEDNSRTASEMADVLYHAMVLLALKDVKAEEVLEVLRKRFSHSGIEEKRSRVSEN
Secondary Structure (PSIPRED)
ccccHHHHHHccEEccccccccccccccccHHHHHcccccccccccHHHHHHHHHcccccccccEEEEEEEccccccHHHHHccHHHHHHHHHcccEEEEEcccccccccccccccEEEEEEEEcccccccEEEEEEEccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccccccHHHHHHHccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHccccHHHHHcccccc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHHHHcccccccccccccccccEEEHHHcccccccccccHHHHHHHHccccccccEEEEEEEcccccEEEEEEccHHHHHHHHHcccEEEEEccHHHHHHcccccccEEEEEEEEEcccccEEEEEEEccccccccccccccccEcccccccccccccccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHcccccccHHHHcccc
Coil and Loop (DISEMBL)
MAVSYSQCVQSLKVsltgsdrcrdndmkrNCLVFAsstesnsnpvlqSKVDRLLDSVKWDNKGLAVAIAQNVDTGAILMQGFANRDALATTISSrkatfysrsrstlwtkgetsqnfiNVQDIfldcdrdsiiylgkpdgptchtgsetcyyTSVLdalkdqpvqgnnlAMTTLYSLESTISQRKAaskngkpswtkRLLLDSKLLCSKIREEADELCRTLeenednsrtASEMADVLYHAMVLLALKDVKAEEVLEVLRKRFshsgieekrsrvsen
Flexible Loop (DISEMBL)
mavsysqcVQSLKvsltgsdrcrdnDMKRNCLVFasstesnsnpvlqSKVDRLLDSVKWDNKGLAVAIAQNVDTGAILMQGFANRDALATtissrkatfysrsrstlwtkgetsqnfINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSVLDALKDQPVQGNNLAMTTLYSLESTISQRkaaskngkpswtkrlllDSKLLCSKIREEADELCRtleenednsrtASEMADVLYHAMVLLALKDVKAEEVLEVLRkrfshsgieekrsrvsen
Low Complexity Region (SEG)
MAVSYSQCVQSLKVSLTGSDRCRDNDMKRNCLVFASSTESNSNPVLQSKVDRLLDSVKWDNKGLAVAIAQNVDTGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSVLDALKDQPVQGNNLAMTTLYSLESTISQRKAASKNGKPSWTKRLLLDSKLLCSKIREEADELCRTLEENEDNSRTASEMADVLYHAMVLLALKDVKAEEVLEVLRKRFSHSGIEEKRSRVSEN
Disordered region (IsUnstruct)
*****************************NCLVF**************KVDRLLDSVKWDNKGLAVAIAQNVDTGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSVLDALKDQPVQGNNLAMTTLYSL*****************WTKRLLLDSKLLCSKIR***********************ADVLYHAMVLLALKDVKAEEVLEVLRK*****************
Disordered Region (DISOPRED)
***************************************************RLLDSVKWDNKGLAVAIAQNVDTGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSVLDALKD*P*QGNNLAMTTLYSLESTISQR*********SWTKRLLLDSKLLCSKIREEADELCRTLEENEDNSRTASEMADVLYHAMVLLALKDVKAEEVLEVLR******************
Disordered Region (DISEMBL)
**********SLKVSLTGSDRCRDNDMKRNCLVFASSTESNSNPVLQSKVDRLLDSVKWDNKGLAVAIAQNVDTGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSVLDALKDQPVQGNNLAMTTLYSLESTI************SWTKRLLLDSKLLCSKIREEADELCRTLEENEDNSRTASEMADVLYHAMVLLALKDVKAEEVLEVLRKRFSHS************
Disordered Region (DISPRO)
**VSYSQCVQSLKVSLTGSDRCRDNDMKRNCLVFASSTESNSNPVLQSKVDRLLDSVKWDNKGLAVAIAQNVDTGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSVLDALKDQPVQGNNLAMTTLYSLESTISQRKAASKNGKPSWTKRLLLDSKLLCSKIREEADELCRTLEENEDNSRTASEMADVLYHAMVLLALKDVKAEEVLEVLRKRFSHS************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAVSYSQCVQSLKVSLTGSDRCRDNDMKRNCLVFASSTESNSNPVLQSKVDRLLDSVKWDNKGLAVAIAQNVDTGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSVLDALKDQPVQGNNLAMTTLYSLESTISQRKAASKNGKPSWTKRLLLDSKLLxxxxxxxxxxxxxxxxxxxxxSRTASEMADVLYHAMVLLALKDVKAEEVLEVLRKRFSHSGIEEKRSRVSEN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	278	2.2.26 [Sep-21-2011]
O82768	281	Histidine biosynthesis bi	yes	no	0.978	0.967	0.693	1e-106
Q9RWD6	218	Histidine biosynthesis bi	yes	no	0.741	0.944	0.369	2e-30
Q8CQ91	211	Histidine biosynthesis bi	yes	no	0.690	0.909	0.372	4e-30
Q5HKP3	211	Histidine biosynthesis bi	yes	no	0.690	0.909	0.372	4e-30
Q7MAQ8	229	Histidine biosynthesis bi	yes	no	0.773	0.938	0.330	9e-30
P44434	221	Histidine biosynthesis bi	yes	no	0.715	0.900	0.367	3e-29
Q9CLL8	201	Histidine biosynthesis bi	yes	no	0.672	0.930	0.372	8e-29
P06989	203	Histidine biosynthesis bi	N/A	no	0.712	0.975	0.371	8e-29
Q7VJ02	231	Histidine biosynthesis bi	yes	no	0.787	0.948	0.331	1e-28
P62349	207	Histidine biosynthesis bi	yes	no	0.726	0.975	0.336	1e-28

>sp|O82768|HIS2_ARATH Histidine biosynthesis bifunctional protein hisIE, chloroplastic OS=Arabidopsis thaliana GN=At1g31860 PE=2 SV=1

 Score =  385 bits (988), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 195/281 (69%), Positives = 225/281 (80%), Gaps = 9/281 (3%)

Query: 1   MAVSYSQCVQSLKVS---LTGSDRCRDNDMK-RNCLVFASSTESNSNPVLQSKVDRLLDS 56
           MAVSY+   QSL  S   +      RD  ++ R+ +VFA +   N N  LQ+KVD LLD 
Sbjct: 1   MAVSYNALAQSLARSSCFIPKPYSFRDTKLRSRSNVVFACN--DNKNIALQAKVDNLLDR 58

Query: 57  VKWDNKGLAVAIAQNVDTGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQN 116
           +KWD+KGLAVAIAQNVDTGA+LMQGF NR+AL+TTISSRKATF+SRSRSTLWTKGETS N
Sbjct: 59  IKWDDKGLAVAIAQNVDTGAVLMQGFVNREALSTTISSRKATFFSRSRSTLWTKGETSNN 118

Query: 117 FINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSVLDALKDQPVQGNNLAMTTLYS 176
           FIN+ D+++DCDRDSIIYLG PDGPTCHTG ETCYYTSV D L +    GN LA+TTLYS
Sbjct: 119 FINILDVYVDCDRDSIIYLGTPDGPTCHTGEETCYYTSVFDQLNNDEASGNKLALTTLYS 178

Query: 177 LESTISQRKAAS---KNGKPSWTKRLLLDSKLLCSKIREEADELCRTLEENEDNSRTASE 233
           LES IS+RK  S   + GKPSWT+RLL D  LLCSKIREEADELCRTLE+NE+ SRT SE
Sbjct: 179 LESIISKRKEESTVPQEGKPSWTRRLLTDDALLCSKIREEADELCRTLEDNEEVSRTPSE 238

Query: 234 MADVLYHAMVLLALKDVKAEEVLEVLRKRFSHSGIEEKRSR 274
           MADVLYHAMVLL+ + VK E+VLEVLRKRFS SGIEEK++R
Sbjct: 239 MADVLYHAMVLLSKRGVKMEDVLEVLRKRFSQSGIEEKQNR 279

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 6EC: .EC: 1EC: .EC: 3EC: 1

>sp|Q9RWD6|HIS2_DEIRA Histidine biosynthesis bifunctional protein HisIE OS=Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) GN=hisI PE=3 SV=1

 Score =  133 bits (334), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/219 (36%), Positives = 123/219 (56%), Gaps = 13/219 (5%)

Query: 54  LDSVKWDNKGLAVAIAQNVDTGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGET 113
           L  + +D  GL   + Q+  +GA+LMQ +A+R A+  T+ +R+AT+YSRSR   W KG+T
Sbjct: 4   LSELNFDPSGLIPVVTQDARSGAVLMQAYADRAAVERTLDTREATYYSRSRGEQWVKGQT 63

Query: 114 SQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSVLDALKDQPVQGNNLAMTT 173
           S +   V  + +DCD DS++Y  +  GP CHTG  +C+Y  +L+   D P  G +  +  
Sbjct: 64  SGHTQRVVSVHVDCDGDSLLYRVEQTGPACHTGEYSCFYRPLLE--DDAPDTGLDGTLER 121

Query: 174 LYSLESTISQRKAASKNGKPSWTKRLL---LDSKLLCSKIREEADELCRTLEENEDNSRT 230
           +Y   +TI++R A    G  S+  RL    LD  L   KI EEA E+     +N D +  
Sbjct: 122 VY---ATITERLATLPEG--SYVARLHAGGLDRVL--KKISEEAGEVLLA-AKNADRAEL 173

Query: 231 ASEMADVLYHAMVLLALKDVKAEEVLEVLRKRFSHSGIE 269
           A+E AD+L+H +  LA   V   +V  VL+ R   SG++
Sbjct: 174 ATETADLLFHTLFALAEVGVSPADVAAVLQGREGKSGLK 212

Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) (taxid: 243230)

EC: 3

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 3

EC: 1

>sp|Q8CQ91|HIS2_STAES Histidine biosynthesis bifunctional protein HisIE OS=Staphylococcus epidermidis (strain ATCC 12228) GN=hisI PE=3 SV=1

 Score =  132 bits (331), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 80/215 (37%), Positives = 119/215 (55%), Gaps = 23/215 (10%)

Query: 50  VDRLLDSVKWDNKGLAVAIAQNVDTGAILMQGFANRDALATTISSRKATFYSRSRSTLWT 109
           +++L+D     +KGL   I Q+  T ++LM G+ N +A   T+  +K TF+SRS+  LWT
Sbjct: 1   MNKLIDF----SKGLVPVILQHAQTDSVLMLGYMNEEAYQKTLKEKKVTFFSRSKQRLWT 56

Query: 110 KGETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSVLDALKDQPVQGNNL 169
           KGETS +F +V+ I LDCD+D+I+    P GPTCHTGS +C+ + +    K Q       
Sbjct: 57  KGETSGHFQHVESIHLDCDQDAILIKVMPQGPTCHTGSLSCFNSEIESRFKIQ------- 109

Query: 170 AMTTLYSLESTISQRKAASKNGKPSWTKRLLLDS-KLLCSKIREEADELC-RTLEENEDN 227
                 +L  TI Q  +A  N   S+T+ LL +  + +  K  EEA E+    ++ N + 
Sbjct: 110 ------ALAQTIHQ--SAKSNQSNSYTQYLLKEGIEKISKKFGEEAFEVVIGAIKHNRE- 160

Query: 228 SRTASEMADVLYHAMVLLALKDVKAEEVLEVLRKR 262
               +E ADV+YH  VLL   D+   EV +VL  R
Sbjct: 161 -EVINETADVMYHLFVLLHSLDIPFSEVEQVLAHR 194

Staphylococcus epidermidis (strain ATCC 12228) (taxid: 176280)

EC: 3

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 3

EC: 1

>sp|Q5HKP3|HIS2_STAEQ Histidine biosynthesis bifunctional protein HisIE OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=hisI PE=3 SV=1

 Score =  131 bits (330), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 80/215 (37%), Positives = 119/215 (55%), Gaps = 23/215 (10%)

Query: 50  VDRLLDSVKWDNKGLAVAIAQNVDTGAILMQGFANRDALATTISSRKATFYSRSRSTLWT 109
           +++L+D     +KGL   I Q+  T ++LM G+ N +A   T+  +K TF+SRS+  LWT
Sbjct: 1   MNKLIDF----SKGLVPVILQHAQTDSVLMLGYMNEEAYQKTLKEKKVTFFSRSKQRLWT 56

Query: 110 KGETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSVLDALKDQPVQGNNL 169
           KGETS +F +V+ I LDCD+D+I+    P GPTCHTGS +C+ + +    K Q       
Sbjct: 57  KGETSGHFQHVESIHLDCDQDAILIKVMPQGPTCHTGSLSCFNSEIESRFKIQ------- 109

Query: 170 AMTTLYSLESTISQRKAASKNGKPSWTKRLLLDS-KLLCSKIREEADELC-RTLEENEDN 227
                 +L  TI Q  +A  N   S+T+ LL +  + +  K  EEA E+    ++ N + 
Sbjct: 110 ------ALAQTIHQ--SAKANQSNSYTQYLLKEGIEKISKKFGEEAFEVVIGAIKHNRE- 160

Query: 228 SRTASEMADVLYHAMVLLALKDVKAEEVLEVLRKR 262
               +E ADV+YH  VLL   D+   EV +VL  R
Sbjct: 161 -EVINETADVMYHLFVLLHSLDIPFSEVEQVLAHR 194

Staphylococcus epidermidis (strain ATCC 35984 / RP62A) (taxid: 176279)

EC: 3

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 3

EC: 1

>sp|Q7MAQ8|HIS2_WOLSU Histidine biosynthesis bifunctional protein HisIE OS=Wolinella succinogenes (strain ATCC 29543 / DSM 1740 / LMG 7466 / NCTC 11488 / FDC 602W) GN=hisI PE=3 SV=1

 Score =  130 bits (328), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 78/236 (33%), Positives = 132/236 (55%), Gaps = 21/236 (8%)

Query: 50  VDRLLDSVKWDNKGLAVAIAQNVDTGAILMQGFANRDALATTISSRKATFYSRSRSTLWT 109
           ++ LLD + W+   L  AI Q   +G +LM  + N++AL  T+S++ A ++SRS+  +W 
Sbjct: 1   MNTLLDGIDWEKHPLLPAIVQERGSGEVLMLAYMNQEALNLTLSTQVAHYFSRSKGRIWK 60

Query: 110 KGETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSV-LDALKDQPVQGNN 168
           KGE+S +   + +IFLDCD D+I+   +  G  CHTG ++C++  V LD+         +
Sbjct: 61  KGESSGHIQKIHEIFLDCDSDTILLQVEQVGVACHTGRKSCFFQKVELDS---------S 111

Query: 169 LAMTT-------LYSLESTISQRKAASKNGKP--SWTKRLLLDSK-LLCSKIREEADELC 218
           L++T+       LY +   +     A +   P  S+T +L    +  +  KI EEA EL 
Sbjct: 112 LSLTSEAPDTSALYGVVDRLYHELLARQGADPQSSYTAKLFSKGENTIGKKIVEEAAELS 171

Query: 219 RTLEENEDNSRTASEMADVLYHAMVLLALKDVKAEEVLEVLRKRFSHSGIEEKRSR 274
             ++++ + S    E AD+LYHA+V LA + +  +++ + L++R   SGI EK SR
Sbjct: 172 FAIKDSSE-SEIVYEAADLLYHALVGLAFRGIHPDKIKQELQRRQGVSGIAEKNSR 226

Wolinella succinogenes (taxid: 844)

EC: 3

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 3

EC: 1

>sp|P44434|HIS2_HAEIN Histidine biosynthesis bifunctional protein HisIE OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=hisI PE=3 SV=1

 Score =  129 bits (323), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 76/207 (36%), Positives = 115/207 (55%), Gaps = 8/207 (3%)

Query: 63  GLAVAIAQNVDTGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQD 122
           GL   I QN+ T  +LM G+ N +AL  TI  RK TF+SR++  LWTKGE S NF+NV++
Sbjct: 13  GLLPVIIQNISTREVLMLGYMNEEALTKTIKERKVTFFSRTKQRLWTKGEISGNFLNVEE 72

Query: 123 IFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSVLDALKDQPVQGNNLAMTTLYSLESTIS 182
           + LDCD D+++ L  P G TCHTG  +C++       +++  Q  N A      LE  + 
Sbjct: 73  MSLDCDNDTLLILVDPIGATCHTGEYSCFHQFTSPQSENKKQQFANWAW--FIKLEQHLK 130

Query: 183 QRKAASKNGKPSWTKRLLL-DSKLLCSKIREEADELCRTLEENEDNSRTASEMADVLYHA 241
           ++K A  +   S+T  L    +K +  K+ EE  E        +D +   SE  D++YH 
Sbjct: 131 EKKNADPSN--SYTATLHAKGTKKIAQKVGEEGVETALAAVA-QDKAEVISEATDLVYHL 187

Query: 242 MVLLALKDVKAEEVLEVLRKRFSHSGI 268
            VLL  +D++  E++  L++R  H GI
Sbjct: 188 TVLLHNQDLQWYEIIAKLQER--HQGI 212

Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) (taxid: 71421)

EC: 3

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 3

EC: 1

>sp|Q9CLL8|HIS2_PASMU Histidine biosynthesis bifunctional protein HisIE OS=Pasteurella multocida (strain Pm70) GN=hisI PE=3 SV=1

 Score =  127 bits (320), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 76/204 (37%), Positives = 122/204 (59%), Gaps = 17/204 (8%)

Query: 64  LAVAIAQNVDTGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDI 123
           L   I QNV T  +LM G+ N++AL  T++ ++ TF+SR+++ LWTKGETS +F+NV D+
Sbjct: 11  LLPVIIQNVATCEVLMLGYMNQEALEKTLAEKRVTFFSRTKNRLWTKGETSGHFLNVVDM 70

Query: 124 FLDCDRDSIIYLGKPDGPTCHTGSETCYYTSVLDALKDQPVQGNNLAMTTLYSLESTISQ 183
            LDCD D+++ L  P G TCHTG+E+C+Y        ++  Q + + ++    LE  I+ 
Sbjct: 71  SLDCDNDTLLILVNPIGETCHTGAESCFYQF------EKTTQPDWIFLS---KLERLIAS 121

Query: 184 RKAASKNGKPSWTKRLLL-DSKLLCSKIREEADE--LCRTLEENEDNSRTASEMADVLYH 240
           RK A  + + S+T +L    +K +  K+ EE  E  L  T+   +D + T  E AD++YH
Sbjct: 122 RKGA--DPESSYTAQLYAKGTKRIAQKVGEEGVETALAATV---KDKAETICEAADLVYH 176

Query: 241 AMVLLALKDVKAEEVLEVLRKRFS 264
             VLL   D+   +V+  L++R +
Sbjct: 177 LTVLLQDADLSWSDVIHKLKERHT 200

Pasteurella multocida (strain Pm70) (taxid: 272843)

EC: 3

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 3

EC: 1

>sp|P06989|HIS2_ECOLI Histidine biosynthesis bifunctional protein HisIE OS=Escherichia coli (strain K12) GN=hisI PE=3 SV=3

 Score =  127 bits (320), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 121/221 (54%), Gaps = 23/221 (10%)

Query: 45  VLQSKVDRLLDSVKWDNKGLAVAIAQNVDTGAILMQGFANRDALATTISSRKATFYSRSR 104
           +L  +  R LD  K D  GL   I Q+  +G +LM G+ N +AL  T+ S K TF+SR++
Sbjct: 1   MLTEQQRRELDWEKTD--GLMPVIVQHAVSGEVLMLGYMNPEALDKTLESGKVTFFSRTK 58

Query: 105 STLWTKGETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSVLDALKDQPV 164
             LWTKGETS NF+NV  I  DCD D+++ L  P GPTCH G+ +C+  +    L     
Sbjct: 59  QRLWTKGETSGNFLNVVSIAPDCDNDTLLVLANPIGPTCHKGTSSCFGDTAHQWL----- 113

Query: 165 QGNNLAMTTLYSLESTISQRKAASKNGKPSWTKRLLL-DSKLLCSKIREEADE--LCRTL 221
                    LY LE  +++RK+A  + + S+T +L    +K +  K+ EE  E  L  T+
Sbjct: 114 --------FLYQLEQLLAERKSA--DPETSYTAKLYASGTKRIAQKVGEEGVETALAATV 163

Query: 222 EENEDNSRTASEMADVLYHAMVLLALKDVKAEEVLEVLRKR 262
               D     +E +D++YH +VLL  + +    V+E LRKR
Sbjct: 164 ---HDRFELTNEASDLMYHLLVLLQDQGLDLTTVIENLRKR 201

Escherichia coli (strain K12) (taxid: 83333)

EC: 3

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 3

EC: 1

>sp|Q7VJ02|HIS2_HELHP Histidine biosynthesis bifunctional protein HisIE OS=Helicobacter hepaticus (strain ATCC 51449 / 3B1) GN=hisI PE=3 SV=1

 Score =  127 bits (318), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 124/229 (54%), Gaps = 10/229 (4%)

Query: 53  LLDSVKWDNKGLAVAIAQNVDTGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGE 112
           +   + W+   L   I Q   +  ILM  ++++ +L  ++ +  A ++SRS+  +W KGE
Sbjct: 4   VFRQIDWERYELIPTIVQEKQSQQILMLAYSSKQSLELSLQTHLAHYFSRSKQRIWQKGE 63

Query: 113 TSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYY--TSVLDALKDQPVQGNNLA 170
            S +  +++++ LDCD DS+I++ +  G  CHTG ++C++   S+    ++ PV      
Sbjct: 64  QSGHIQHIKEVKLDCDNDSLIFIVEQVGVACHTGEKSCFFRIFSLDKNCQNPPVSMPQKY 123

Query: 171 MTTLYS----LESTISQRKAASKNGKPSWTKRLLLDS-KLLCSKIREEADELCRTLEENE 225
              +Y     L   I QR+   +N + S+T  LL      +  KI EEA ELC  L +++
Sbjct: 124 PIGVYHILDDLYHIIEQRRC--ENIEHSYTASLLAKGVNGIGKKIIEEAGELCFAL-KDK 180

Query: 226 DNSRTASEMADVLYHAMVLLALKDVKAEEVLEVLRKRFSHSGIEEKRSR 274
           D      E AD+ YH +V LAL+ +  E VL+ LR+R   SGIEEK SR
Sbjct: 181 DEKAIIYECADLFYHILVGLALEHITPERVLQELRRRMGQSGIEEKASR 229

Helicobacter hepaticus (strain ATCC 51449 / 3B1) (taxid: 235279)

EC: 3

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 3

EC: 1

>sp|P62349|HIS2_PHOPR Histidine biosynthesis bifunctional protein HisIE OS=Photobacterium profundum GN=hisI PE=3 SV=1

 Score =  127 bits (318), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 72/214 (33%), Positives = 123/214 (57%), Gaps = 12/214 (5%)

Query: 53  LLDSVKWDN-KGLAVAIAQNVDTGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKG 111
           L+ ++ W+   GL  A+ Q+  +G +LM G+ N++AL  T+ +++ TF+SR++  LWTKG
Sbjct: 3   LVTTINWEKVDGLVPAVIQDNTSGQVLMLGYMNKEALNKTLETKQVTFWSRTKERLWTKG 62

Query: 112 ETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSVLDALKDQPVQGNNLAM 171
           ETS N + ++ I LDCD+D+++    P GPTCH G+ TC+     +  ++QP      A+
Sbjct: 63  ETSGNVLELKSINLDCDQDTLLVKVNPVGPTCHLGTPTCFDNDA-EGKQEQP------AL 115

Query: 172 TTLYSLESTISQRKAASKNGKPSWTKRLLL-DSKLLCSKIREEADELCRTLEENEDNSRT 230
             L+ LE  ++ RK A  + + S+T  L    +K +  K+ EE  E+        D +  
Sbjct: 116 VFLHQLEQVLANRKGA--DPESSYTASLYARGTKRISQKVGEEGVEVALAATSG-DKAEL 172

Query: 231 ASEMADVLYHAMVLLALKDVKAEEVLEVLRKRFS 264
             E AD++YH +VLL  + +   +V E L++R +
Sbjct: 173 VCESADLIYHLIVLLQDQGLSLSDVTEKLQERHN 206

Photobacterium profundum (taxid: 74109)

EC: 3

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 3

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	278
225451641	289	PREDICTED: histidine biosynthesis bifunc	0.996	0.958	0.746	1e-109
224121570	286	predicted protein [Populus trichocarpa]	0.964	0.937	0.711	1e-108
358248860	281	uncharacterized protein LOC100807276 [Gl	0.974	0.964	0.712	1e-106
297851624	281	AT-IE [Arabidopsis lyrata subsp. lyrata]	0.978	0.967	0.704	1e-105
15222496	281	phosphoribosyl-ATP pyrophosphatase [Arab	0.978	0.967	0.693	1e-104
357130914	297	PREDICTED: histidine biosynthesis bifunc	0.812	0.760	0.786	1e-100
413946888	299	histidine biosynthesis protein hisIE [Ze	0.820	0.762	0.772	7e-99
226499576	299	histidine biosynthesis bifunctional prot	0.820	0.762	0.772	8e-99
242057001	297	hypothetical protein SORBIDRAFT_03g01111	0.820	0.767	0.768	1e-98
242086188	306	hypothetical protein SORBIDRAFT_08g02087	0.794	0.722	0.787	8e-98

>gi|225451641|ref|XP_002277244.1| PREDICTED: histidine biosynthesis bifunctional protein hisIE, chloroplastic [Vitis vinifera] gi|296082253|emb|CBI21258.3| unnamed protein product [Vitis vinifera]

 Score =  400 bits (1029), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 215/288 (74%), Positives = 241/288 (83%), Gaps = 11/288 (3%)

Query: 1   MAVSYSQCVQSLKVS------LTGSDRCRDND-MKRNCLVFASSTESNSNPVLQSKVDRL 53
           MAVSYS C+QSL+V+      ++  D  RDN  MK    V ASS + + +  L++KV+ L
Sbjct: 1   MAVSYSHCLQSLRVTPRTRLFVSNVDCWRDNRIMKSYSPVSASSKKPHQDLSLEAKVETL 60

Query: 54  LDSVKWDNKGLAVAIAQNVDTGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGET 113
           LDSVKWD+KGLAVAIAQNVDTGA+LMQGF NRDALATTISS+KATFYSRSRS LWTKGET
Sbjct: 61  LDSVKWDDKGLAVAIAQNVDTGAVLMQGFVNRDALATTISSQKATFYSRSRSKLWTKGET 120

Query: 114 SQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSVLDALKD-QPVQGNNLAMT 172
           S NFIN+ DIFLDCDRDSIIYLGKPDGPTCHTGSETCYY+SV D LK+ Q  + NNLA+T
Sbjct: 121 SLNFINIHDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYSSVFDLLKNPQGEENNNLALT 180

Query: 173 TLYSLESTISQRK---AASKNGKPSWTKRLLLDSKLLCSKIREEADELCRTLEENEDNSR 229
            LYSLESTISQRK   A+ +NGKPSWTKRLLLD KLLCSKIREEADELCRT EENED SR
Sbjct: 181 ALYSLESTISQRKAEVASPQNGKPSWTKRLLLDDKLLCSKIREEADELCRTHEENEDKSR 240

Query: 230 TASEMADVLYHAMVLLALKDVKAEEVLEVLRKRFSHSGIEEKRSRVSE 277
           TASEMADVLYH MVLL+LKDVK EEVL+VLR RFS SGIEEK+SR ++
Sbjct: 241 TASEMADVLYHTMVLLSLKDVKMEEVLQVLRHRFSQSGIEEKKSRATQ 288

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224121570|ref|XP_002330733.1| predicted protein [Populus trichocarpa] gi|222872509|gb|EEF09640.1| predicted protein [Populus trichocarpa]

 Score =  396 bits (1018), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 200/281 (71%), Positives = 227/281 (80%), Gaps = 13/281 (4%)

Query: 7   QCVQSL------KVSLTGSDRCRDNDM---KRNCLVFASS-TESNSNPVLQSKVDRLLDS 56
            C+Q+L       V     D+ R N +   +R  LVFAS+  +S+    L+SKV+ LLDS
Sbjct: 5   HCIQALSFPSRTHVFFPIGDQNRYNIINKKQRGFLVFASADKKSDKELYLKSKVETLLDS 64

Query: 57  VKWDNKGLAVAIAQNVDTGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQN 116
           VKWD+KGLAV IAQN+DTGA+LMQGF N DALATTISS+KATFYSRSRS LWTKGETS+N
Sbjct: 65  VKWDDKGLAVGIAQNIDTGAVLMQGFVNSDALATTISSQKATFYSRSRSALWTKGETSKN 124

Query: 117 FINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSVLDALKDQPVQGNNLAMTTLYS 176
           FINV DI+LDCDRDSIIYLGKPDGPTCHTGSETCYYTSV D L+++ V GN LA+TTLYS
Sbjct: 125 FINVHDIYLDCDRDSIIYLGKPDGPTCHTGSETCYYTSVPDLLENKQVDGNKLALTTLYS 184

Query: 177 LESTISQRKAA---SKNGKPSWTKRLLLDSKLLCSKIREEADELCRTLEENEDNSRTASE 233
           LE+ ISQRKA     + GKPSWTKRLLLD  LLC+KIREEADELCRTLE+NED +RTA E
Sbjct: 185 LETIISQRKAELALPQTGKPSWTKRLLLDHDLLCTKIREEADELCRTLEDNEDQARTADE 244

Query: 234 MADVLYHAMVLLALKDVKAEEVLEVLRKRFSHSGIEEKRSR 274
           M DVLYHAMVL+A+K VK EEVLEVLRKRF  SGIEEKRSR
Sbjct: 245 MGDVLYHAMVLMAVKGVKIEEVLEVLRKRFFQSGIEEKRSR 285

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358248860|ref|NP_001240208.1| uncharacterized protein LOC100807276 [Glycine max] gi|255641260|gb|ACU20907.1| unknown [Glycine max]

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 201/282 (71%), Positives = 222/282 (78%), Gaps = 11/282 (3%)

Query: 1   MAVSYS---QCVQSLKVSLTGSDRCRDNDMKRNCLVFASSTESNSNPVLQSKVDRLLDSV 57
           MAVSY    QC +           C     + + LVFAS       P  + KVD LLDSV
Sbjct: 1   MAVSYVHMLQCNRGFHKGNLSYPNCSYKARRSHRLVFASM----HTP--EPKVDSLLDSV 54

Query: 58  KWDNKGLAVAIAQNVDTGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNF 117
           KWD KGL VAIAQNVDTGAILMQGFANR+A+ATTISSRKATFYSRSRSTLWTKGETS NF
Sbjct: 55  KWDTKGLVVAIAQNVDTGAILMQGFANREAIATTISSRKATFYSRSRSTLWTKGETSNNF 114

Query: 118 INVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSVLDALKDQPVQGNNLAMTTLYSL 177
           INV D+F+DCDRDSIIYLGKPDGPTCHTG+ETCYYTSV D LK Q  + N LA+T+LY+L
Sbjct: 115 INVHDVFIDCDRDSIIYLGKPDGPTCHTGAETCYYTSVFDLLKQQEAEENKLALTSLYAL 174

Query: 178 ESTISQRKA--ASKNGKPSWTKRLLLDSKLLCSKIREEADELCRTLEENEDNSRTASEMA 235
           ESTISQRK     +N KPSWTKRLLL+ KLLCSKIREEA+ELC+TLE NED  RTASEMA
Sbjct: 175 ESTISQRKTELIGENEKPSWTKRLLLNDKLLCSKIREEANELCQTLENNEDEKRTASEMA 234

Query: 236 DVLYHAMVLLALKDVKAEEVLEVLRKRFSHSGIEEKRSRVSE 277
           DVLYHAMVLLA K VK E+VL+VLR RFS SGIEEK+SRVS+
Sbjct: 235 DVLYHAMVLLAKKGVKIEDVLQVLRLRFSQSGIEEKKSRVSQ 276

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297851624|ref|XP_002893693.1| AT-IE [Arabidopsis lyrata subsp. lyrata] gi|297339535|gb|EFH69952.1| AT-IE [Arabidopsis lyrata subsp. lyrata]

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 198/281 (70%), Positives = 226/281 (80%), Gaps = 9/281 (3%)

Query: 1   MAVSYSQCVQSLKVS---LTGSDRCRDNDMK-RNCLVFASSTESNSNPVLQSKVDRLLDS 56
           MAVSY+   QSL  S   +  S   RD   + R+ +VFAS+   N N  LQ+KVD LLD 
Sbjct: 1   MAVSYNALAQSLTRSSCFIPKSYCVRDTKQRSRSNVVFASN--DNKNIALQAKVDNLLDR 58

Query: 57  VKWDNKGLAVAIAQNVDTGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQN 116
           +KWD+KGLAVAIAQNVDTGA+LMQGF NR+AL+TTISSRKATF+SRSRSTLWTKGETS N
Sbjct: 59  IKWDDKGLAVAIAQNVDTGAVLMQGFVNREALSTTISSRKATFFSRSRSTLWTKGETSNN 118

Query: 117 FINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSVLDALKDQPVQGNNLAMTTLYS 176
           FIN+ D+++DCDRDSIIYLG PDGPTCHTG ETCYYTSV D L +    GN LA+TTLYS
Sbjct: 119 FINILDVYIDCDRDSIIYLGTPDGPTCHTGEETCYYTSVFDQLNNDEPSGNKLALTTLYS 178

Query: 177 LESTISQRKAAS---KNGKPSWTKRLLLDSKLLCSKIREEADELCRTLEENEDNSRTASE 233
           LES IS+RK  S   + GKPSWT+RLL D  LLCSKIREEADELCRTLE+NE+ SRT SE
Sbjct: 179 LESIISKRKEESTVPQEGKPSWTRRLLTDDALLCSKIREEADELCRTLEDNEEVSRTPSE 238

Query: 234 MADVLYHAMVLLALKDVKAEEVLEVLRKRFSHSGIEEKRSR 274
           MADVLYHAMVLLA + VK E+VLEVLRKRFS SGIEEK++R
Sbjct: 239 MADVLYHAMVLLAKRGVKMEDVLEVLRKRFSQSGIEEKQNR 279

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15222496|ref|NP_174469.1| phosphoribosyl-ATP pyrophosphatase [Arabidopsis thaliana] gi|11132859|sp|O82768.1|HIS2_ARATH RecName: Full=Histidine biosynthesis bifunctional protein hisIE, chloroplastic; Includes: RecName: Full=Phosphoribosyl-AMP cyclohydrolase; Short=PRA-CH; Includes: RecName: Full=Phosphoribosyl-ATP pyrophosphatase; Short=PRA-PH; Flags: Precursor gi|12321304|gb|AAG50725.1|AC079041_18 phosphoribosyl-ATP pyrophosphohydrolase (At-IE) [Arabidopsis thaliana] gi|3461884|dbj|BAA32528.1| phosphoribosyl-ATP pyrophosphohydrolase [Arabidopsis thaliana] gi|3461886|dbj|BAA32529.1| phosphoribosyl-ATP pyrophosphohydrolase [Arabidopsis thaliana] gi|15028395|gb|AAK76674.1| putative phosphoribosyl-ATP pyrophosphohydrolase At-IE [Arabidopsis thaliana] gi|19310753|gb|AAL85107.1| putative phosphoribosyl-ATP pyrophosphohydrolase At-IE [Arabidopsis thaliana] gi|21554409|gb|AAM63514.1| phosphoribosyl-ATP pyrophosphohydrolase At-IE [Arabidopsis thaliana] gi|332193287|gb|AEE31408.1| phosphoribosyl-ATP pyrophosphatase [Arabidopsis thaliana]

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 195/281 (69%), Positives = 225/281 (80%), Gaps = 9/281 (3%)

Query: 1   MAVSYSQCVQSLKVS---LTGSDRCRDNDMK-RNCLVFASSTESNSNPVLQSKVDRLLDS 56
           MAVSY+   QSL  S   +      RD  ++ R+ +VFA +   N N  LQ+KVD LLD 
Sbjct: 1   MAVSYNALAQSLARSSCFIPKPYSFRDTKLRSRSNVVFACN--DNKNIALQAKVDNLLDR 58

Query: 57  VKWDNKGLAVAIAQNVDTGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQN 116
           +KWD+KGLAVAIAQNVDTGA+LMQGF NR+AL+TTISSRKATF+SRSRSTLWTKGETS N
Sbjct: 59  IKWDDKGLAVAIAQNVDTGAVLMQGFVNREALSTTISSRKATFFSRSRSTLWTKGETSNN 118

Query: 117 FINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSVLDALKDQPVQGNNLAMTTLYS 176
           FIN+ D+++DCDRDSIIYLG PDGPTCHTG ETCYYTSV D L +    GN LA+TTLYS
Sbjct: 119 FINILDVYVDCDRDSIIYLGTPDGPTCHTGEETCYYTSVFDQLNNDEASGNKLALTTLYS 178

Query: 177 LESTISQRKAAS---KNGKPSWTKRLLLDSKLLCSKIREEADELCRTLEENEDNSRTASE 233
           LES IS+RK  S   + GKPSWT+RLL D  LLCSKIREEADELCRTLE+NE+ SRT SE
Sbjct: 179 LESIISKRKEESTVPQEGKPSWTRRLLTDDALLCSKIREEADELCRTLEDNEEVSRTPSE 238

Query: 234 MADVLYHAMVLLALKDVKAEEVLEVLRKRFSHSGIEEKRSR 274
           MADVLYHAMVLL+ + VK E+VLEVLRKRFS SGIEEK++R
Sbjct: 239 MADVLYHAMVLLSKRGVKMEDVLEVLRKRFSQSGIEEKQNR 279

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357130914|ref|XP_003567089.1| PREDICTED: histidine biosynthesis bifunctional protein hisIE, chloroplastic-like [Brachypodium distachyon]

 Score =  369 bits (947), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 180/229 (78%), Positives = 199/229 (86%), Gaps = 3/229 (1%)

Query: 49  KVDRLLDSVKWDNKGLAVAIAQNVDTGAILMQGFANRDALATTISSRKATFYSRSRSTLW 108
           KV+ LLDSVKWD KGLAVAIAQNVDTGAILMQGFAN++ALATTIS+RKATFYSRSRS+LW
Sbjct: 66  KVEALLDSVKWDIKGLAVAIAQNVDTGAILMQGFANKEALATTISTRKATFYSRSRSSLW 125

Query: 109 TKGETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSVLDALKDQPVQGNN 168
           TKGETS NFINV DIFLDCDRDSIIYLG PDGPTCHTG+ETCYY+SV DAL+        
Sbjct: 126 TKGETSMNFINVHDIFLDCDRDSIIYLGTPDGPTCHTGAETCYYSSVYDALQGSKSNQER 185

Query: 169 LAMTTLYSLESTISQRK---AASKNGKPSWTKRLLLDSKLLCSKIREEADELCRTLEENE 225
              TTLYSLE TIS+RK    A+ +GKPSWTK+LLLD++LLCSKIREEA EL +TL ENE
Sbjct: 186 QVATTLYSLEDTISRRKEEVVAAGSGKPSWTKKLLLDNQLLCSKIREEAGELIQTLLENE 245

Query: 226 DNSRTASEMADVLYHAMVLLALKDVKAEEVLEVLRKRFSHSGIEEKRSR 274
           D SRTASEMAD+LYHAMVLL++KDVK EEVLEVLRKRFS SG+EEK SR
Sbjct: 246 DRSRTASEMADLLYHAMVLLSVKDVKMEEVLEVLRKRFSQSGVEEKASR 294

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|413946888|gb|AFW79537.1| histidine biosynthesis protein hisIE [Zea mays]

 Score =  366 bits (939), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 180/233 (77%), Positives = 202/233 (86%), Gaps = 5/233 (2%)

Query: 46  LQSKVDRLLDSVKWDNKGLAVAIAQNVDTGAILMQGFANRDALATTISSRKATFYSRSRS 105
           + ++VD LLDSVKWD+KGLAVAIAQNVDTGAILMQGFAN++ALA TIS+RKATF+SRSRS
Sbjct: 65  VDTEVDTLLDSVKWDSKGLAVAIAQNVDTGAILMQGFANKEALAKTISTRKATFFSRSRS 124

Query: 106 TLWTKGETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSVLDALK-DQPV 164
           +LWTKGETS NFINV DIFLDCD DSIIYLGKPDGPTCHTG+ETCYYTSV DAL+  +P 
Sbjct: 125 SLWTKGETSMNFINVHDIFLDCDHDSIIYLGKPDGPTCHTGAETCYYTSVYDALQSSKPN 184

Query: 165 QGNNLAMTTLYSLESTISQR---KAASKNGKPSWTKRLLLDSKLLCSKIREEADELCRTL 221
           +G  + MTTLYSLE TIS+R   K     GKPSWTK+LLLD++LLCSKIREEA EL +TL
Sbjct: 185 EGRQV-MTTLYSLEDTISRRHEEKVTDGGGKPSWTKKLLLDNQLLCSKIREEAGELIQTL 243

Query: 222 EENEDNSRTASEMADVLYHAMVLLALKDVKAEEVLEVLRKRFSHSGIEEKRSR 274
            ENED SR ASEMAD+LYHAMVLL +KDVK E+VLEVLRKRFS SGIEEK SR
Sbjct: 244 LENEDQSRAASEMADLLYHAMVLLRVKDVKMEQVLEVLRKRFSQSGIEEKASR 296

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|226499576|ref|NP_001150567.1| histidine biosynthesis bifunctional protein hisIE [Zea mays] gi|195640256|gb|ACG39596.1| histidine biosynthesis bifunctional protein hisIE [Zea mays]

 Score =  365 bits (938), Expect = 8e-99,   Method: Compositional matrix adjust.
 Identities = 180/233 (77%), Positives = 202/233 (86%), Gaps = 5/233 (2%)

Query: 46  LQSKVDRLLDSVKWDNKGLAVAIAQNVDTGAILMQGFANRDALATTISSRKATFYSRSRS 105
           + ++VD LLDSVKWD+KGLAVAIAQNVDTGAILMQGFAN++ALA TIS+RKATF+SRSRS
Sbjct: 65  VDTEVDTLLDSVKWDSKGLAVAIAQNVDTGAILMQGFANKEALAKTISTRKATFFSRSRS 124

Query: 106 TLWTKGETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSVLDALK-DQPV 164
           +LWTKGETS NFINV DIFLDCD DSIIYLGKPDGPTCHTG+ETCYYTSV DAL+  +P 
Sbjct: 125 SLWTKGETSMNFINVHDIFLDCDHDSIIYLGKPDGPTCHTGAETCYYTSVYDALQSSKPN 184

Query: 165 QGNNLAMTTLYSLESTISQR---KAASKNGKPSWTKRLLLDSKLLCSKIREEADELCRTL 221
           +G  + MTTLYSLE TIS+R   K     GKPSWTK+LLLD++LLCSKIREEA EL +TL
Sbjct: 185 EGRQV-MTTLYSLEDTISRRHEEKVTDGGGKPSWTKKLLLDNQLLCSKIREEAGELIQTL 243

Query: 222 EENEDNSRTASEMADVLYHAMVLLALKDVKAEEVLEVLRKRFSHSGIEEKRSR 274
            ENED SR ASEMAD+LYHAMVLL +KDVK E+VLEVLRKRFS SGIEEK SR
Sbjct: 244 LENEDQSRAASEMADLLYHAMVLLRVKDVKMEQVLEVLRKRFSQSGIEEKASR 296

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242057001|ref|XP_002457646.1| hypothetical protein SORBIDRAFT_03g011110 [Sorghum bicolor] gi|241929621|gb|EES02766.1| hypothetical protein SORBIDRAFT_03g011110 [Sorghum bicolor]

 Score =  365 bits (937), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 179/233 (76%), Positives = 202/233 (86%), Gaps = 5/233 (2%)

Query: 46  LQSKVDRLLDSVKWDNKGLAVAIAQNVDTGAILMQGFANRDALATTISSRKATFYSRSRS 105
           + ++VD LLDSVKWD+KGLAVAIAQNVDTGAILMQGFAN++ALA TIS+RKATF+SRSRS
Sbjct: 63  VDTEVDTLLDSVKWDSKGLAVAIAQNVDTGAILMQGFANKEALAKTISTRKATFFSRSRS 122

Query: 106 TLWTKGETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSVLDALK-DQPV 164
           +LWTKGETS NFINV DIFLDCD DSIIYLGKPDGPTCHTG+ETCYYTSV DAL+  +P 
Sbjct: 123 SLWTKGETSMNFINVHDIFLDCDHDSIIYLGKPDGPTCHTGAETCYYTSVYDALQSSKPN 182

Query: 165 QGNNLAMTTLYSLESTISQRK---AASKNGKPSWTKRLLLDSKLLCSKIREEADELCRTL 221
           +G  + MTTLYSLE TIS+R+        GKPSWTK+LLLD++LLCSKIREEA EL +TL
Sbjct: 183 EGRQV-MTTLYSLEDTISRRQEEIVTEGGGKPSWTKKLLLDNQLLCSKIREEAGELIQTL 241

Query: 222 EENEDNSRTASEMADVLYHAMVLLALKDVKAEEVLEVLRKRFSHSGIEEKRSR 274
            ENED SR ASEMAD+LYHAMVLL +KDVK EEVLE+LRKRFS SGIEEK SR
Sbjct: 242 LENEDQSRAASEMADLLYHAMVLLRVKDVKMEEVLEILRKRFSQSGIEEKASR 294

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242086188|ref|XP_002443519.1| hypothetical protein SORBIDRAFT_08g020870 [Sorghum bicolor] gi|241944212|gb|EES17357.1| hypothetical protein SORBIDRAFT_08g020870 [Sorghum bicolor]

 Score =  362 bits (930), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 178/226 (78%), Positives = 198/226 (87%), Gaps = 5/226 (2%)

Query: 53  LLDSVKWDNKGLAVAIAQNVDTGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGE 112
           LLDSVKWD+KGLAVAIAQNVDTGAILMQGFAN++ALA TIS+RKATF+SRSRS+LWTKGE
Sbjct: 79  LLDSVKWDSKGLAVAIAQNVDTGAILMQGFANKEALAKTISTRKATFFSRSRSSLWTKGE 138

Query: 113 TSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSVLDALK-DQPVQGNNLAM 171
           TS NFINV DIFLDCDRDSIIYLGKPDGPTCHTG+ETCYYTSV DAL+  +P +G  + +
Sbjct: 139 TSMNFINVHDIFLDCDRDSIIYLGKPDGPTCHTGAETCYYTSVYDALQSSKPNEGRQV-V 197

Query: 172 TTLYSLESTISQRK---AASKNGKPSWTKRLLLDSKLLCSKIREEADELCRTLEENEDNS 228
           TTLYSLE TIS+R+        GKPSWTK+LLLD++LLCSKIREEA EL +TL ENED S
Sbjct: 198 TTLYSLEDTISRRQEEIVTEGGGKPSWTKKLLLDNQLLCSKIREEAGELIQTLLENEDQS 257

Query: 229 RTASEMADVLYHAMVLLALKDVKAEEVLEVLRKRFSHSGIEEKRSR 274
           R ASEMAD+LYHAMVLL +KDVK EEVLEVLRKRFS SGIEEK SR
Sbjct: 258 RAASEMADLLYHAMVLLRVKDVKMEEVLEVLRKRFSQSGIEEKASR 303

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	278
TAIR|locus:2034516	281	AT-IE [Arabidopsis thaliana (t	0.978	0.967	0.693	1.1e-96
TIGR_CMR|CPS_3896	206	CPS_3896 "phosphoribosyl-ATP p	0.669	0.902	0.403	6.9e-31
UNIPROTKB|P06989	203	hisI "phosphoribosyl-AMP cyclo	0.719	0.985	0.365	1.9e-28
UNIPROTKB|Q9KSW7	210	hisI "Histidine biosynthesis b	0.737	0.976	0.342	1.9e-28
TIGR_CMR|VC_1139	210	VC_1139 "phosphoribosyl-ATP py	0.737	0.976	0.342	1.9e-28
TIGR_CMR|CHY_1091	203	CHY_1091 "histidine biosynthes	0.715	0.980	0.341	3.9e-28
TIGR_CMR|CJE_1776	207	CJE_1776 "phosphoribosyl-ATP p	0.697	0.937	0.350	2.8e-27
TIGR_CMR|SO_2067	211	SO_2067 "phosphoribosyl-ATP py	0.611	0.805	0.365	4.8e-23
TIGR_CMR|DET_1329	104	DET_1329 "phosphoribosyl-AMP c	0.356	0.951	0.444	9e-22
TIGR_CMR|SPO_1684	119	SPO_1684 "phosphoribosyl-AMP c	0.359	0.840	0.42	1.2e-19

TAIR|locus:2034516 AT-IE [Arabidopsis thaliana (taxid:3702)]

 Score = 961 (343.3 bits), Expect = 1.1e-96, P = 1.1e-96
 Identities = 195/281 (69%), Positives = 225/281 (80%)

Query:     1 MAVSYSQCVQSLKVS---LTGSDRCRDNDMK-RNCLVFASSTESNSNPVLQSKVDRLLDS 56
             MAVSY+   QSL  S   +      RD  ++ R+ +VFA +   N N  LQ+KVD LLD 
Sbjct:     1 MAVSYNALAQSLARSSCFIPKPYSFRDTKLRSRSNVVFACN--DNKNIALQAKVDNLLDR 58

Query:    57 VKWDNKGLAVAIAQNVDTGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQN 116
             +KWD+KGLAVAIAQNVDTGA+LMQGF NR+AL+TTISSRKATF+SRSRSTLWTKGETS N
Sbjct:    59 IKWDDKGLAVAIAQNVDTGAVLMQGFVNREALSTTISSRKATFFSRSRSTLWTKGETSNN 118

Query:   117 FINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSVLDALKDQPVQGNNLAMTTLYS 176
             FIN+ D+++DCDRDSIIYLG PDGPTCHTG ETCYYTSV D L +    GN LA+TTLYS
Sbjct:   119 FINILDVYVDCDRDSIIYLGTPDGPTCHTGEETCYYTSVFDQLNNDEASGNKLALTTLYS 178

Query:   177 LESTISQRKAAS---KNGKPSWTKRLLLDSKLLCSKIREEADELCRTLEENEDNSRTASE 233
             LES IS+RK  S   + GKPSWT+RLL D  LLCSKIREEADELCRTLE+NE+ SRT SE
Sbjct:   179 LESIISKRKEESTVPQEGKPSWTRRLLTDDALLCSKIREEADELCRTLEDNEEVSRTPSE 238

Query:   234 MADVLYHAMVLLALKDVKAEEVLEVLRKRFSHSGIEEKRSR 274
             MADVLYHAMVLL+ + VK E+VLEVLRKRFS SGIEEK++R
Sbjct:   239 MADVLYHAMVLLSKRGVKMEDVLEVLRKRFSQSGIEEKQNR 279

GO:0000105 "histidine biosynthetic process" evidence=IEA;TAS

GO:0004635 "phosphoribosyl-AMP cyclohydrolase activity" evidence=IEA;IDA

GO:0004636 "phosphoribosyl-ATP diphosphatase activity" evidence=IEA;IDA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009165 "nucleotide biosynthetic process" evidence=RCA

TIGR_CMR|CPS_3896 CPS_3896 "phosphoribosyl-ATP pyrophosphatase/phosphoribosyl-AMP cyclohydrolase" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
 Identities = 84/208 (40%), Positives = 117/208 (56%)

Query:    58 KWDNKGLAVAIAQNVDTGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNF 117
             K DN  L  AI Q+  TGAILMQG+ N+ +L  T+++ KATF+SRS+  LW KGETS NF
Sbjct:    15 KMDN--LIPAIIQHAATGAILMQGYMNQASLQATLTTGKATFFSRSKQALWVKGETSGNF 72

Query:   118 INVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSVLDALKDQPVQGNNLAMTTLYSL 177
             + V+ +  DCD DS++   +P GP+CH G+E+C+         +Q +   N     L  L
Sbjct:    73 LEVKQVLTDCDNDSLLIACEPIGPSCHLGTESCF--------PEQKLTQQNF----LSQL 120

Query:   178 ESTISQRKAASKNGKPSWTKRLLL-DSKLLCSKIREEADE--LCRTLEENEDNSRTASEM 234
             E  I QRK    + K S+T  L    +  +  K+ EE  E  L    E  ED      E 
Sbjct:   121 EQVIQQRK--DDDPKESYTAHLFSRGTTKMAQKVGEEGVEVALAAVAETKED---LLGEC 175

Query:   235 ADVLYHAMVLLALKDVKAEEVLEVLRKR 262
             AD+ YH +VLLA + ++  EV+EVL+ R
Sbjct:   176 ADLFYHTLVLLADQKIELSEVMEVLQTR 203

GO:0000105 "histidine biosynthetic process" evidence=ISS

GO:0004635 "phosphoribosyl-AMP cyclohydrolase activity" evidence=ISS

GO:0004636 "phosphoribosyl-ATP diphosphatase activity" evidence=ISS

UNIPROTKB|P06989 hisI "phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphatase" [Escherichia coli K-12 (taxid:83333)]

 Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
 Identities = 80/219 (36%), Positives = 118/219 (53%)

Query:    45 VLQSKVDRLLDSVKWDNKGLAVAIAQNVDTGAILMQGFANRDALATTISSRKATFYSRSR 104
             +L  +  R LD  K D  GL   I Q+  +G +LM G+ N +AL  T+ S K TF+SR++
Sbjct:     1 MLTEQQRRELDWEKTD--GLMPVIVQHAVSGEVLMLGYMNPEALDKTLESGKVTFFSRTK 58

Query:   105 STLWTKGETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSVLDALKDQPV 164
               LWTKGETS NF+NV  I  DCD D+++ L  P GPTCH G+ +C+  +    L     
Sbjct:    59 QRLWTKGETSGNFLNVVSIAPDCDNDTLLVLANPIGPTCHKGTSSCFGDTAHQWL----- 113

Query:   165 QGNNLAMTTLYSLESTISQRKAASKNGKPSWTKRLLLD-SKLLCSKIREEADELCRTLEE 223
                      LY LE  +++RK+A    + S+T +L    +K +  K+ EE  E       
Sbjct:   114 --------FLYQLEQLLAERKSADP--ETSYTAKLYASGTKRIAQKVGEEGVETALAATV 163

Query:   224 NEDNSRTASEMADVLYHAMVLLALKDVKAEEVLEVLRKR 262
             + D     +E +D++YH +VLL  + +    V+E LRKR
Sbjct:   164 H-DRFELTNEASDLMYHLLVLLQDQGLDLTTVIENLRKR 201

GO:0008152 "metabolic process" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008652 "cellular amino acid biosynthetic process" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0004636 "phosphoribosyl-ATP diphosphatase activity" evidence=IEA;IGI

GO:0004635 "phosphoribosyl-AMP cyclohydrolase activity" evidence=IEA;ISS

GO:0000105 "histidine biosynthetic process" evidence=IEA

UNIPROTKB|Q9KSW7 hisI "Histidine biosynthesis bifunctional protein HisIE" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]

 Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
 Identities = 76/222 (34%), Positives = 119/222 (53%)

Query:    43 NPVLQSKVDRLLDSVKWDN-KGLAVAIAQNVDTGAILMQGFANRDALATTISSRKATFYS 101
             NP   S    L D + W    GL  AI Q+  +  +LM G+ N +AL  T+ +++ TF+S
Sbjct:     2 NPA--SPFATLTDRIDWQKVDGLVPAIVQDFQSSQVLMMGYMNPEALQKTLDTQQVTFFS 59

Query:   102 RSRSTLWTKGETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSVLDALKD 161
             RS+  LWTKGETS + + +++I LDCD+D+++    P GPTCHTG+ TC+         D
Sbjct:    60 RSKQRLWTKGETSGHVLQLKNIALDCDQDTLLVKVNPIGPTCHTGTVTCW---------D 110

Query:   162 QPVQGNNLAMTTLYSLESTISQRKAASKNGKPSWTKRLLL-DSKLLCSKIREEADELCRT 220
                Q  +  M  L+ LE  +++RK A  +   S+T  L    +K +  K+ EE  E+   
Sbjct:   111 GDAQEES-QMVWLHQLEQLLAERKNADPSS--SYTASLYARGTKRIAQKVGEEGVEVALA 167

Query:   221 LEENEDNSRTASEMADVLYHAMVLLALKDVKAEEVLEVLRKR 262
                  D      E AD++YH +VLL  + +   +V+  L++R
Sbjct:   168 ATAG-DKEELICESADLMYHLLVLLQEQGLAMNDVINKLKER 208

GO:0000105 "histidine biosynthetic process" evidence=ISS

GO:0004635 "phosphoribosyl-AMP cyclohydrolase activity" evidence=ISS

GO:0004636 "phosphoribosyl-ATP diphosphatase activity" evidence=ISS

TIGR_CMR|VC_1139 VC_1139 "phosphoribosyl-ATP pyrophosphatase/phosphoribosyl-AMP cyclohydrolase" [Vibrio cholerae O1 biovar El Tor (taxid:686)]

 Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
 Identities = 76/222 (34%), Positives = 119/222 (53%)

Query:    43 NPVLQSKVDRLLDSVKWDN-KGLAVAIAQNVDTGAILMQGFANRDALATTISSRKATFYS 101
             NP   S    L D + W    GL  AI Q+  +  +LM G+ N +AL  T+ +++ TF+S
Sbjct:     2 NPA--SPFATLTDRIDWQKVDGLVPAIVQDFQSSQVLMMGYMNPEALQKTLDTQQVTFFS 59

Query:   102 RSRSTLWTKGETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSVLDALKD 161
             RS+  LWTKGETS + + +++I LDCD+D+++    P GPTCHTG+ TC+         D
Sbjct:    60 RSKQRLWTKGETSGHVLQLKNIALDCDQDTLLVKVNPIGPTCHTGTVTCW---------D 110

Query:   162 QPVQGNNLAMTTLYSLESTISQRKAASKNGKPSWTKRLLL-DSKLLCSKIREEADELCRT 220
                Q  +  M  L+ LE  +++RK A  +   S+T  L    +K +  K+ EE  E+   
Sbjct:   111 GDAQEES-QMVWLHQLEQLLAERKNADPSS--SYTASLYARGTKRIAQKVGEEGVEVALA 167

Query:   221 LEENEDNSRTASEMADVLYHAMVLLALKDVKAEEVLEVLRKR 262
                  D      E AD++YH +VLL  + +   +V+  L++R
Sbjct:   168 ATAG-DKEELICESADLMYHLLVLLQEQGLAMNDVINKLKER 208

GO:0000105 "histidine biosynthetic process" evidence=ISS

GO:0004635 "phosphoribosyl-AMP cyclohydrolase activity" evidence=ISS

GO:0004636 "phosphoribosyl-ATP diphosphatase activity" evidence=ISS

TIGR_CMR|CHY_1091 CHY_1091 "histidine biosynthesis bifunctional protein HisIE" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
 Identities = 71/208 (34%), Positives = 115/208 (55%)

Query:    57 VKWDNKGLAVAIAQNVDTGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQN 116
             +K+D KGL  A+ Q++DT  +LM  + N +++  ++ + +  FYSRSR+ LW KGETS N
Sbjct:     3 LKFDEKGLIPAVVQDIDTREVLMVAYMNEESVKKSLETGQTWFYSRSRNALWHKGETSGN 62

Query:   117 FINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSVLDALKDQPVQGNNLAMTTLYS 176
                + +I  DCD D ++   +  G  CHTG+ +C+Y ++ +   ++  +  N  +  L+ 
Sbjct:    63 TQEIVEIRYDCDADCLLIKVRQKGVACHTGNYSCFYRTLWEGKGER--EDLNEVLAKLWQ 120

Query:   177 LESTISQRKAASKNGKPSWTKRLLLDS-KLLCSKIREEADELCRTLEENEDNSRTASEMA 235
             +   I  RK     G  S+T +L       +  K+ EEA E      +N+D      E A
Sbjct:   121 I---ILDRKQKLPEG--SYTAKLFQKGIDKIAQKVGEEAVETV-IASKNDDKGELIYEAA 174

Query:   236 DVLYHAMVLLALKDVKAEEVLEVLRKRF 263
             D++YH +VLLA KDV   ++ E L+KRF
Sbjct:   175 DLVYHLLVLLAAKDVALGDIAEELKKRF 202

GO:0000105 "histidine biosynthetic process" evidence=ISS

GO:0004635 "phosphoribosyl-AMP cyclohydrolase activity" evidence=ISS

GO:0004636 "phosphoribosyl-ATP diphosphatase activity" evidence=ISS

TIGR_CMR|CJE_1776 CJE_1776 "phosphoribosyl-ATP pyrophosphatase/phosphoribosyl-AMP cyclohydrolase" [Campylobacter jejuni RM1221 (taxid:195099)]

 Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
 Identities = 75/214 (35%), Positives = 114/214 (53%)

Query:    53 LLDSVKWDN-KGLAVAIAQNVDTGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKG 111
             L + + W     L   I Q+  T  +LM GF N +AL  ++ S K  F+SR++  LW KG
Sbjct:     7 LNEKIAWQKVDNLLPVIIQDAKTCEVLMLGFMNNEALEKSLESGKVVFFSRTKQRLWMKG 66

Query:   112 ETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSVLDALKDQPVQGNNLAM 171
             E S NF+N+ D+ LDCD D+++ L  P GPTCHTG  +C+          + +   N   
Sbjct:    67 EESGNFLNIIDLSLDCDNDTLLILANPVGPTCHTGDISCF----------EKIS-KNADF 115

Query:   172 TTLYSLESTISQRKAASKNGKPSWTKRLLLD-SKLLCSKIREEADE--LCRTLEENEDNS 228
               L  LE  I+ RK A +N   S+T +L    +K +  K+ EE  E  L  T+++ E+  
Sbjct:   116 VFLARLEKLINARKNADEN--TSYTAKLFKSGTKRIAQKVGEEGVETALAATVKDKEE-- 171

Query:   229 RTASEMADVLYHAMVLLALKDVKAEEVLEVLRKR 262
                 E AD++YH  VLLA  ++   +V+  L++R
Sbjct:   172 -LICEAADLMYHLSVLLADANLSFSDVISKLKER 204

GO:0000105 "histidine biosynthetic process" evidence=ISS

GO:0004635 "phosphoribosyl-AMP cyclohydrolase activity" evidence=ISS

GO:0004636 "phosphoribosyl-ATP diphosphatase activity" evidence=ISS

TIGR_CMR|SO_2067 SO_2067 "phosphoribosyl-ATP pyrophosphatase/phosphoribosyl-AMP cyclohydrolase" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
 Identities = 69/189 (36%), Positives = 102/189 (53%)

Query:    59 WDNK-GLAVAIAQNVDTGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNF 117
             WD + GL  A+ QN  +G +LM G+ ++ AL  T+++   TF+SRS+  LWTKGETS + 
Sbjct:    16 WDKQDGLIPAVIQNHLSGKVLMLGYMDKAALEQTLATGDVTFFSRSKQRLWTKGETSGHT 75

Query:   118 INVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSVLDALKDQPVQGNNLAMTTLYSL 177
             + +  I  DCD DS++    P+GPTCH G+E+C+    LD        GN  A   L +L
Sbjct:    76 LKLVAIDKDCDNDSLLVQVLPNGPTCHKGTESCW----LD--------GN--AHPFLNNL 121

Query:   178 ESTISQRKAASKNGKPSWTKRLLL-DSKLLCSKIREEADELCRTLEENEDNSRTASEMAD 236
                I+ RK  S     S+T  L    +K +  K+ EE  E       + D     +E +D
Sbjct:   122 AELIASRKGQSPES--SYTASLFARGTKRIAQKVGEEGLETALAAATH-DKEELVNEASD 178

Query:   237 VLYHAMVLL 245
             ++YH +VLL
Sbjct:   179 LMYHLLVLL 187

GO:0000105 "histidine biosynthetic process" evidence=ISS

GO:0004635 "phosphoribosyl-AMP cyclohydrolase activity" evidence=ISS

GO:0004636 "phosphoribosyl-ATP diphosphatase activity" evidence=ISS

TIGR_CMR|DET_1329 DET_1329 "phosphoribosyl-AMP cyclohydrolase" [Dehalococcoides ethenogenes 195 (taxid:243164)]

 Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
 Identities = 44/99 (44%), Positives = 67/99 (67%)

Query:    57 VKWDNKGLAVAIAQNVDTGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQN 116
             +K D+KGL  AI Q+V  G +LM G+ N ++   T  +    FYSRSR  LW KG TS N
Sbjct:     3 LKLDDKGLIAAIVQDVKDGTVLMLGYMNPESFKLTQETGSVWFYSRSRQELWNKGATSGN 62

Query:   117 FINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSV 155
              + V+++++DCD+D+++   +P GPTCHTG+ +C++T V
Sbjct:    63 KLIVKEMYIDCDKDAVLVKAEPMGPTCHTGNRSCFFTPV 101

GO:0000105 "histidine biosynthetic process" evidence=ISS

GO:0004635 "phosphoribosyl-AMP cyclohydrolase activity" evidence=ISS

TIGR_CMR|SPO_1684 SPO_1684 "phosphoribosyl-AMP cyclohydrolase" [Ruegeria pomeroyi DSS-3 (taxid:246200)]

 Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
 Identities = 42/100 (42%), Positives = 64/100 (64%)

Query:    56 SVKWDNKGLAVAIAQNVDTGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQ 115
             ++K+D  GL  AIAQ+  TG +LM  + N  A+A T+ S + T++SRSR + W KGE+S 
Sbjct:     7 TLKYDAAGLIPAIAQDAATGEVLMMAWMNAQAVARTLESGRVTYWSRSRQSFWVKGESSG 66

Query:   116 NFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSV 155
             +   + D  +DCDRD ++   +  GP CHT   +C+YT+V
Sbjct:    67 HVQELVDFRVDCDRDCLLVTVRQTGPACHTNRRSCFYTAV 106

GO:0000105 "histidine biosynthetic process" evidence=ISS

GO:0004635 "phosphoribosyl-AMP cyclohydrolase activity" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O82768	HIS2_ARATH	3, ., 6, ., 1, ., 3, 1	0.6939	0.9784	0.9679	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.6.1	0.976
3rd Layer	3.5.4	0.976
3rd Layer	3.6.1.31	0.991
3rd Layer	3.5.4.19	0.991
3rd Layer	3.6.1.12	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00037970001	SubName- Full=Chromosome chr14 scaffold_9, whole genome shotgun sequence; (289 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00035413001	SubName- Full=Chromosome chr12 scaffold_78, whole genome shotgun sequence; (390 aa)	•		•	•		•	•		0.998
	GSVIVG00002274001	RecName- Full=Histidinol dehydrogenase; EC=1.1.1.23;; Catalyzes the sequential NAD-dependent ox [...] (438 aa)	•		•	•		•	•		0.995
	GSVIVG00021607001	SubName- Full=Chromosome chr8 scaffold_23, whole genome shotgun sequence; (306 aa)	•			•		•	•		0.991
	GSVIVG00019988001	RecName- Full=Imidazoleglycerol-phosphate dehydratase; EC=4.2.1.19; (180 aa)	•		•	•			•		0.985
	GSVIVG00027290001	SubName- Full=Chromosome chr19 scaffold_4, whole genome shotgun sequence; (570 aa)	•		•	•		•	•		0.981
	GSVIVG00024606001	SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (288 aa)	•		•	•			•		0.958
	GSVIVG00031801001	SubName- Full=Chromosome chr18 scaffold_59, whole genome shotgun sequence; (269 aa)	•		•	•			•		0.956
	GSVIVG00029073001	SubName- Full=Chromosome chr12 scaffold_47, whole genome shotgun sequence; (396 aa)	•						•		0.899
	GSVIVG00016051001	SubName- Full=Chromosome chr17 scaffold_12, whole genome shotgun sequence; (389 aa)	•						•		0.864
	GSVIVG00020704001	SubName- Full=Chromosome chr14 scaffold_21, whole genome shotgun sequence; (430 aa)	•						•		0.819

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	278
PLN02346	271	PLN02346, PLN02346, histidine biosynthesis bifunct	1e-148
PRK02759	203	PRK02759, PRK02759, bifunctional phosphoribosyl-AM	5e-65
PRK00051	125	PRK00051, hisI, phosphoribosyl-AMP cyclohydrolase;	8e-41
COG0139	111	COG0139, HisI, Phosphoribosyl-AMP cyclohydrolase [	1e-39
pfam01502	75	pfam01502, PRA-CH, Phosphoribosyl-AMP cyclohydrola	9e-36
cd11534	84	cd11534, NTP-PPase_HisIE_like, Nucleoside Triphosp	5e-24
PRK00400	105	PRK00400, hisE, phosphoribosyl-ATP pyrophosphatase	9e-24
TIGR03188	84	TIGR03188, histidine_hisI, phosphoribosyl-ATP pyro	2e-20
cd11546	84	cd11546, NTP-PPase_His4, Nucleoside Triphosphate P	2e-17
COG0140	92	COG0140, HisI, Phosphoribosyl-ATP pyrophosphohydro	7e-17
pfam01503	83	pfam01503, PRA-PH, Phosphoribosyl-ATP pyrophosphoh	6e-10
COG1694	102	COG1694, MazG, Predicted pyrophosphatase [General	5e-05

>gnl|CDD|215196 PLN02346, PLN02346, histidine biosynthesis bifunctional protein hisIE

 Score =  415 bits (1069), Expect = e-148
 Identities = 187/256 (73%), Positives = 210/256 (82%), Gaps = 2/256 (0%)

Query: 22  CRDNDMKRNCLVFASSTESNSNPVLQSKVDRLLDSVKWDNKGLAVAIAQNVDTGAILMQG 81
           CR +         A+ +++ + P L+ KV+ LLDSVKWD+KGLAVAIAQNVDTGAILMQG
Sbjct: 12  CRRDRKISAASKAAAGSKTLAEPALEPKVESLLDSVKWDDKGLAVAIAQNVDTGAILMQG 71

Query: 82  FANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSIIYLGKPDGP 141
           FANR+A++ TISSRKATFYSRSRS LWTKGETS NFINV DI+LDCDRDSIIYLG PDGP
Sbjct: 72  FANREAISATISSRKATFYSRSRSGLWTKGETSGNFINVHDIYLDCDRDSIIYLGTPDGP 131

Query: 142 TCHTGSETCYYTSVLDALKDQPVQGNNLAMTTLYSLESTISQRKAAS--KNGKPSWTKRL 199
           TCHTG+ETCYYTSV DAL++    GN LA+TTLYSLE TI QRK  +  + GKPSWTKRL
Sbjct: 132 TCHTGAETCYYTSVDDALQNGGPHGNKLALTTLYSLEETIQQRKEEAVPQGGKPSWTKRL 191

Query: 200 LLDSKLLCSKIREEADELCRTLEENEDNSRTASEMADVLYHAMVLLALKDVKAEEVLEVL 259
           L D +LLCSKIREEA ELC+TLEENE   RTASEMADVLYHAMVLLA + VK E+VLEVL
Sbjct: 192 LQDPELLCSKIREEAGELCQTLEENEGKERTASEMADVLYHAMVLLAKQGVKMEDVLEVL 251

Query: 260 RKRFSHSGIEEKRSRV 275
           RKRFS SGIEEK SR 
Sbjct: 252 RKRFSQSGIEEKASRP 267

Length = 271

>gnl|CDD|235067 PRK02759, PRK02759, bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein; Reviewed

 Score =  201 bits (514), Expect = 5e-65
 Identities = 79/216 (36%), Positives = 116/216 (53%), Gaps = 21/216 (9%)

Query: 53  LLDSVKWD-NKGLAVAIAQNVDTGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKG 111
            ++ + +D N GL  AI Q+  TG +LM G+ NR+AL  T+ + + TF+SRS+  LWTKG
Sbjct: 4   QIEELDFDKNDGLIPAIVQDALTGEVLMLGYMNREALEKTLETGEVTFFSRSKQRLWTKG 63

Query: 112 ETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSVLDALKDQPVQGNNLAM 171
           ETS N   V  I LDCD D+++ L +P GP CHTG+ +C+Y                   
Sbjct: 64  ETSGNTQKVVSIRLDCDNDTLLVLVEPIGPACHTGTRSCFYREK----------KAAPPW 113

Query: 172 TTLYSLESTISQRKAASKNGKPSWTKRLLL--DSKLLCSKIREEADELCRTLEE--NEDN 227
             L  LE  I++RK A   G  S+T +L      ++   K+ EEA E    +    N D 
Sbjct: 114 DFLSQLEQLIAERKNAPPEG--SYTAKLFASGTKRIA-QKVGEEAVE---VVLAAKNNDK 167

Query: 228 SRTASEMADVLYHAMVLLALKDVKAEEVLEVLRKRF 263
               +E AD+LYH +VLLA + +   +V+  L++R 
Sbjct: 168 EELINEAADLLYHLLVLLADQGLSLSDVIAELKERH 203

Length = 203

>gnl|CDD|234598 PRK00051, hisI, phosphoribosyl-AMP cyclohydrolase; Reviewed

 Score =  136 bits (346), Expect = 8e-41
 Identities = 45/109 (41%), Positives = 69/109 (63%)

Query: 51  DRLLDSVKWDNKGLAVAIAQNVDTGAILMQGFANRDALATTISSRKATFYSRSRSTLWTK 110
            ++LD +K+D  GL  AIAQ+ +TG +LM  + N +ALA T+ + +A ++SRSR  LW K
Sbjct: 1   PKILDRLKFDADGLVPAIAQDAETGEVLMVAWMNEEALAKTLETGRAHYWSRSRQKLWRK 60

Query: 111 GETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSVLDAL 159
           GETS +   V ++ LDCD D+++   +  G  CHTG  +C+Y  +   L
Sbjct: 61  GETSGHVQKVHEVRLDCDGDAVLLKVEQVGAACHTGRRSCFYRKLEGGL 109

Length = 125

>gnl|CDD|223217 COG0139, HisI, Phosphoribosyl-AMP cyclohydrolase [Amino acid transport and metabolism]

 Score =  133 bits (337), Expect = 1e-39
 Identities = 49/105 (46%), Positives = 70/105 (66%), Gaps = 1/105 (0%)

Query: 53  LLDSVKWDNKGLAVAIAQNVDTGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGE 112
           LLD + +D  GL  AI Q+ +TG +LM  + N +ALA T+ + +A +YSRSR  LWTKGE
Sbjct: 7   LLDELDFDKDGLVPAIVQDAETGEVLMLAYMNEEALAKTLETGEAHYYSRSRQELWTKGE 66

Query: 113 TSQNFINVQDIFLDCDRDSIIYLGKP-DGPTCHTGSETCYYTSVL 156
           TS +   V +I LDCD D+++ L +   GP CHTG+ +C+Y +V 
Sbjct: 67  TSGHTQKVVEIRLDCDGDALLLLVEQIGGPACHTGTRSCFYRAVG 111

Length = 111

>gnl|CDD|201829 pfam01502, PRA-CH, Phosphoribosyl-AMP cyclohydrolase

 Score =  122 bits (308), Expect = 9e-36
 Identities = 34/75 (45%), Positives = 49/75 (65%)

Query: 79  MQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSIIYLGKP 138
           M  + N++AL  T+ + KA ++SRSR  LW KGETS N   V++I LDCD D+++   + 
Sbjct: 1   MLAYMNKEALEKTLETGKAHYFSRSRQRLWHKGETSGNTQKVKEIRLDCDGDALLVKVEQ 60

Query: 139 DGPTCHTGSETCYYT 153
            GP CHTG  +C+Y 
Sbjct: 61  VGPACHTGRRSCFYR 75

This enzyme catalyzes the third step in the histidine biosynthetic pathway. It requires Zn ions for activity. Length = 75

>gnl|CDD|212141 cd11534, NTP-PPase_HisIE_like, Nucleoside Triphosphate Pyrophosphohydrolase (EC 3

 Score = 92.1 bits (230), Expect = 5e-24
 Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 4/87 (4%)

Query: 174 LYSLESTISQRKAASKNGKPSWTKRLLLD-SKLLCSKIREEADELCRTLEENEDNSRTAS 232
           L  LE+ I  RK A    + S+T +LL      +  K+ EEA E+    + N D      
Sbjct: 1   LEELEAVIEDRKEAPP--EGSYTAKLLEKGLDKILKKVGEEAVEVIIAAK-NGDKEELVY 57

Query: 233 EMADVLYHAMVLLALKDVKAEEVLEVL 259
           E AD+LYH +VLLA + +  E+VLE L
Sbjct: 58  EAADLLYHLLVLLAYRGISLEDVLEEL 84

6.1.8) MazG-like domain found in Escherichia coli phosphoribosyl-ATP pyrophosphohydrolase (HisIE or PRATP-PH) and its homologs. This family includes Escherichia coli phosphoribosyl-ATP pyrophosphohydrolase, HisIE, and its homologs from all three kingdoms of life. E. coli HisIE is encoded by the hisIE gene, which is formed by hisE gene fused to hisl. HisIE is a bifunctional enzyme responsible for the second and third steps of the histidine-biosynthesis pathway. Its N-terminal and C-terminal domains have phosphoribosyl-AMP cyclohydrolase (HisI) and phosphoribosyl-ATP pyrophosphohydrolase (HisE or PRATP-PH) activity, respectively. This family corresponds to the C-terminal domain of HisIE and includes many hisE gene encoding proteins, all of which show significant sequence similarity to Mycobacterium tuberculosis phosphoribosyl-ATP pyrophosphohydrolase (HisE or PRATP-PH). These proteins may be responsible for only the second step in the histidine-biosynthetic pathway, irreversibly hydrolyzing phosphoribosyl-ATP (PRATP) to phosphoribosyl-AMP (PRAMP) and pyrophosphate. Length = 84

>gnl|CDD|179005 PRK00400, hisE, phosphoribosyl-ATP pyrophosphatase; Validated

 Score = 92.1 bits (230), Expect = 9e-24
 Identities = 44/109 (40%), Positives = 62/109 (56%), Gaps = 10/109 (9%)

Query: 170 AMTTLYSLESTISQRKAASKNGKPSWTKRLL---LDSKLLCSKIREEADELCRTLE-ENE 225
            M TL  L +TI +RK A   G  S+T +LL   LD   +  K+ EEA E+   +  ++ 
Sbjct: 1   MMDTLERLAATIEERKGADPEG--SYTAKLLDKGLDK--ILKKVGEEATEV--VIAAKDG 54

Query: 226 DNSRTASEMADVLYHAMVLLALKDVKAEEVLEVLRKRFSHSGIEEKRSR 274
           D      E+AD+LYH +VLLA + +  E+VL  L +R   SG+EEK SR
Sbjct: 55  DREELVYEIADLLYHLLVLLAARGISLEDVLAELERREGLSGLEEKASR 103

Length = 105

>gnl|CDD|234143 TIGR03188, histidine_hisI, phosphoribosyl-ATP pyrophosphohydrolase

 Score = 82.5 bits (205), Expect = 2e-20
 Identities = 36/87 (41%), Positives = 48/87 (55%), Gaps = 4/87 (4%)

Query: 174 LYSLESTISQRKAASKNGKPSWTKRLLLD-SKLLCSKIREEADELCRTLEENEDNSRTAS 232
           L  LE+TI++RKAA   G  S+T RL       +  K+ EEA E+    + N D      
Sbjct: 1   LEELEATIAERKAADPEG--SYTARLFAKGLDKILKKVGEEAVEVIIAAK-NGDKEELVY 57

Query: 233 EMADVLYHAMVLLALKDVKAEEVLEVL 259
           E AD+LYH +VLLA + V  E+VL  L
Sbjct: 58  EAADLLYHLLVLLAAQGVSLEDVLAEL 84

This enzyme, phosphoribosyl-ATP pyrophosphohydrolase, catalyses the second step in the histidine biosynthesis pathway. It often occurs as a fusion protein. This model a somewhat narrower scope than pfam01503, as some paralogs that appear to be functionally distinct are excluded from this model [Amino acid biosynthesis, Histidine family]. Length = 84

>gnl|CDD|212153 cd11546, NTP-PPase_His4, Nucleoside Triphosphate Pyrophosphohydrolase (EC 3

 Score = 74.6 bits (184), Expect = 2e-17
 Identities = 37/90 (41%), Positives = 51/90 (56%), Gaps = 6/90 (6%)

Query: 173 TLYSLESTISQRKAASKNGKPSWTKRLLLDSKLLCSKIREEADELCRTLEENEDNSRTAS 232
            L +LE+T++QRK  +  G  S+T RL  D KLL +KI EEA+ELC    E +     A 
Sbjct: 1   GLDALEATLTQRKQNAPPG--SYTARLFNDEKLLRAKIMEEAEELC----EAKTKDEVAW 54

Query: 233 EMADVLYHAMVLLALKDVKAEEVLEVLRKR 262
           E AD+LY A+V      V  ++V   L +R
Sbjct: 55  EAADLLYFALVRCVAAGVSLDDVERELDRR 84

6.1.8) MazG-like domain found in His4-like fungal histidine biosynthesis trifunctional proteins and their homologs. This family includes fungal histidine biosynthesis trifunctional proteins and their homologs from eukaryotes and bacteria. Some family members contain three domains responsible for phosphoribosyl-AMP cyclohydrolase (PRAMP-CH), phosphoribosyl-ATP pyrophosphohydrolase (PRATP-PH), and histidinol dehydrogenase (Histidinol-DH) activity, respectively. Some others do not have Histidinol-DH domain, but have an additional N-terminal TIM phosphate binding domain. This family corresponds to the domain for PRATP-PH activity, which shows significant sequence similarity to Mycobacterium tuberculosis PRATP-PH that catalyzes the second step in the histidine-biosynthetic pathway, irreversibly hydrolyzing phosphoribosyl-ATP (PRATP) to phosphoribosyl-AMP (PRAMP) and pyrophosphate. Length = 84

>gnl|CDD|223218 COG0140, HisI, Phosphoribosyl-ATP pyrophosphohydrolase [Amino acid transport and metabolism]

 Score = 73.4 bits (181), Expect = 7e-17
 Identities = 35/91 (38%), Positives = 50/91 (54%), Gaps = 4/91 (4%)

Query: 174 LYSLESTISQRKAASKNGKPSWTKRLLLD-SKLLCSKIREEADELCRTLEENEDNSRTAS 232
           L  LE+ I+ RK A   G  S+T +LL      +  K+ EEA E+     ++ED     S
Sbjct: 1   LSELEAVIADRKNARPEG--SYTAKLLAKGIDKIAKKVGEEAVEVI-LAAKDEDKEELVS 57

Query: 233 EMADVLYHAMVLLALKDVKAEEVLEVLRKRF 263
           E AD+LYH +VLLA + +  E+VL  L +R 
Sbjct: 58  EAADLLYHLLVLLAAQGLSLEDVLRELERRH 88

Length = 92

>gnl|CDD|216537 pfam01503, PRA-PH, Phosphoribosyl-ATP pyrophosphohydrolase

 Score = 54.2 bits (131), Expect = 6e-10
 Identities = 28/89 (31%), Positives = 37/89 (41%), Gaps = 7/89 (7%)

Query: 174 LYSLESTISQRKAASKNGKPSWTKRLLLDSKLLCSKIREEADELCRTLEENEDNSRTASE 233
           L     T  +RK  +  G    T  L     L  +KI EEA EL    +   D    A E
Sbjct: 1   LREFHRTFGERKPETPEG---STAELFA---LRLAKIGEEAVELLEAAKNG-DLVELADE 53

Query: 234 MADVLYHAMVLLALKDVKAEEVLEVLRKR 262
           +AD+LY    LL L  V  + V E + + 
Sbjct: 54  LADLLYVLYGLLVLLGVDLDAVFEEVHRS 82

This enzyme catalyzes the second step in the histidine biosynthetic pathway. Length = 83

>gnl|CDD|224608 COG1694, MazG, Predicted pyrophosphatase [General function prediction only]

 Score = 41.2 bits (97), Expect = 5e-05
 Identities = 28/103 (27%), Positives = 41/103 (39%), Gaps = 12/103 (11%)

Query: 175 YSLESTIS--QRKAASKNGKPSWTKRLLLDSKLLCSKIREEADELCRTLEENEDNSRTAS 232
             LE  +    +    + G P   ++       L   + EEA E+   + + ED      
Sbjct: 1   MDLEKLLDIMAQLRDPEGGCPWDEEQTPES---LLLYLVEEAGEVAEAIRKEEDLEDLKE 57

Query: 233 EMADVLYHAMVLLALKDVKAEEVLE-VLRKRFSHSGIEEKRSR 274
           E+ DVL   + L  L D+  E  LE V+RK      I EK  R
Sbjct: 58  ELGDVLADVLFLANLLDIDLEFALEEVVRK------IAEKLER 94

Length = 102

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	278
PRK02759	203	bifunctional phosphoribosyl-AMP cyclohydrolase/pho	100.0
PLN02346	271	histidine biosynthesis bifunctional protein hisIE	100.0
KOG4311	359	consensus Histidinol dehydrogenase [Amino acid tra	100.0
COG0139	111	HisI Phosphoribosyl-AMP cyclohydrolase [Amino acid	100.0
PRK00051	125	hisI phosphoribosyl-AMP cyclohydrolase; Reviewed	100.0
PF01502	75	PRA-CH: Phosphoribosyl-AMP cyclohydrolase; InterPr	100.0
PRK00400	105	hisE phosphoribosyl-ATP pyrophosphatase; Validated	100.0
COG0140	92	HisI Phosphoribosyl-ATP pyrophosphohydrolase [Amin	100.0
TIGR03188	84	histidine_hisI phosphoribosyl-ATP pyrophosphohydro	99.97
PF01503	83	PRA-PH: Phosphoribosyl-ATP pyrophosphohydrolase; I	99.74
PF03819	74	MazG: MazG nucleotide pyrophosphohydrolase domain;	97.97
TIGR00444	248	mazG MazG family protein. This family of prokaryot	97.17
PRK09562	262	mazG nucleoside triphosphate pyrophosphohydrolase;	97.1
PRK09562	262	mazG nucleoside triphosphate pyrophosphohydrolase;	96.73
COG1694	102	MazG Predicted pyrophosphatase [General function p	96.66
PRK12334	277	nucleoside triphosphate pyrophosphohydrolase; Revi	96.09
PRK12333	204	nucleoside triphosphate pyrophosphohydrolase; Revi	95.14
TIGR00444	248	mazG MazG family protein. This family of prokaryot	91.54
COG4696	180	Uncharacterized protein conserved in bacteria [Fun	89.55
PF04447	100	DUF550: Protein of unknown function (DUF550); Inte	86.74

>PRK02759 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein; Reviewed

Probab=100.00  E-value=1.6e-85  Score=584.61  Aligned_cols=198  Identities=40%  Similarity=0.671  Sum_probs=187.0

Q ss_pred             hhhccccCCC-CeEEEEEEecCCCceEEEeecCHHHHHHHHhcCcEEEEeCCCCcceeccCCCCCeeEEEEEeccCCCCc
Q 023745           53 LLDSVKWDNK-GLAVAIAQNVDTGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDS  131 (278)
Q Consensus        53 ~~~~i~~d~~-GLiPaivQd~~tg~VLmlaymN~eAl~~Tl~tg~~~y~SRSr~~lW~KGetSG~~q~v~~i~~DCD~D~  131 (278)
                      +++.|+||++ |||||||||+.||+|||+||||+|||.+||+||++|||||||++||+|||||||+|+|++|++|||+||
T Consensus         4 ~~~~l~~~~~~gLip~ivqd~~tg~vLml~ymn~eal~~Tl~tg~~~~~SRSr~~lW~KGetSG~~q~v~~i~~DCD~D~   83 (203)
T PRK02759          4 QIEELDFDKNDGLIPAIVQDALTGEVLMLGYMNREALEKTLETGEVTFFSRSKQRLWTKGETSGNTQKVVSIRLDCDNDT   83 (203)
T ss_pred             hhhccCcCCCCCcEEEEEEECCCCCEEEEEecCHHHHHHHHhcCcEEEEeCCCCcccCCCCCCCCeEEEEEEEecCCCCe
Confidence            4678999997 999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEeeCCCCCCCCCcccccccccccccCCCcCCCchhhhHHHHHHHHHHHHHhcCCCCCCchhhhhhcCC-hhHHHHH
Q 023745          132 IIYLGKPDGPTCHTGSETCYYTSVLDALKDQPVQGNNLAMTTLYSLESTISQRKAASKNGKPSWTKRLLLDS-KLLCSKI  210 (278)
Q Consensus       132 ll~~v~~~g~aCHtg~~SCF~~~~~~~~~~~~~~~~~~~~~~L~~L~~~I~~Rk~~~~e~~~SYT~~Ll~~g-~~i~kKI  210 (278)
                      ||++|+|.|||||||++||||+.+..          +.+..+|.+|+++|.+||.++|++  |||++||++| ++|+|||
T Consensus        84 ll~~V~~~G~aCHtg~~sCF~~~~~~----------~~~~~~L~~L~~~I~~Rk~~~pe~--SYT~~L~~~G~~kI~kKv  151 (203)
T PRK02759         84 LLVLVEPIGPACHTGTRSCFYREKKA----------APPWDFLSQLEQLIAERKNAPPEG--SYTAKLFASGTKRIAQKV  151 (203)
T ss_pred             EEEEEEecCCcCCCCCCCCCCCcccc----------cchhhHHHHHHHHHHHHHhCCCCC--cHHHHHHhCcHHHHHHHH
Confidence            99999999999999999999986510          112468999999999999998876  9999999998 8999999


Q ss_pred             hHhHHHHHHhhhccCCchhhHhhHHHHHHHHHHHHHhCCCCHHHHHHHHHhHh
Q 023745          211 REEADELCRTLEENEDNSRTASEMADVLYHAMVLLALKDVKAEEVLEVLRKRF  263 (278)
Q Consensus       211 gEEA~E~iiAa~~~~d~~eli~EaADLlYHllVlL~~~gv~l~dV~~eL~~R~  263 (278)
                      ||||+|+++|++ ++|++++++|+||||||+||+|+++||+|+||++||++||
T Consensus       152 gEEA~E~iiAak-~~d~~~li~E~ADLlYHllVlL~~~gv~l~dV~~eL~~R~  203 (203)
T PRK02759        152 GEEAVEVVLAAK-NNDKEELINEAADLLYHLLVLLADQGLSLSDVIAELKERH  203 (203)
T ss_pred             HHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcC
Confidence            999999999986 7899999999999999999999999999999999999997

>PLN02346 histidine biosynthesis bifunctional protein hisIE

Probab=100.00  E-value=7.4e-84  Score=593.13  Aligned_cols=234  Identities=78%  Similarity=1.162  Sum_probs=210.1

Q ss_pred             CCCcchhhHHHhhhccccCCCCeEEEEEEecCCCceEEEeecCHHHHHHHHhcCcEEEEeCCCCcceeccCCCCCeeEEE
Q 023745           42 SNPVLQSKVDRLLDSVKWDNKGLAVAIAQNVDTGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQ  121 (278)
Q Consensus        42 ~~~~~~~~~~~~~~~i~~d~~GLiPaivQd~~tg~VLmlaymN~eAl~~Tl~tg~~~y~SRSr~~lW~KGetSG~~q~v~  121 (278)
                      -.++.+.+++.+++.|+||++|||||||||+.||+||||||||+|||.+||+||++|||||||++||+|||||||+|+|+
T Consensus        32 ~~~~~~~~~~~~~~~l~~~~~gLipaivQd~~tg~VLml~ymn~eal~~Tl~tg~~~y~SRSR~~LW~KGetSG~~q~v~  111 (271)
T PLN02346         32 AEPALEPKVESLLDSVKWDDKGLAVAIAQNVDTGAILMQGFANREAISATISSRKATFYSRSRSGLWTKGETSGNFINVH  111 (271)
T ss_pred             cccccchhHHHHHHhcCcCCCCCEEEEEEECCCCCEEEEEecCHHHHHHHHhcCcEEEEeCCCCccccCCCCcCCeEEEE
Confidence            34578889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEeccCCCCcEEEEEeeCCCCCCCCCcccccccccccccCCCcCCCchhhhHHHHHHHHHHHHHhc----CCCCCCchhh
Q 023745          122 DIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSVLDALKDQPVQGNNLAMTTLYSLESTISQRKAA----SKNGKPSWTK  197 (278)
Q Consensus       122 ~i~~DCD~D~ll~~v~~~g~aCHtg~~SCF~~~~~~~~~~~~~~~~~~~~~~L~~L~~~I~~Rk~~----~~e~~~SYT~  197 (278)
                      +|++|||+|||||+|+|.|||||||++||||+.+...........++.++.+|.+|+++|.+|+.+    +|+  +|||+
T Consensus       112 ~i~~DCD~D~ll~~V~~~G~aCHtg~~SCF~~~~~~~~~~~~~~~~~~~~~~L~~L~~~I~~Rk~~~~~~~~e--~SYT~  189 (271)
T PLN02346        112 DIYLDCDRDSIIYLGTPDGPTCHTGAETCYYTSVDDALQNGGPHGNKLALTTLYSLEETIQQRKEEAVPQGGK--PSWTK  189 (271)
T ss_pred             EEEecCCCCeEEEEEEecCCcccCCCCCCcCccccccccccccccccchhhHHHHHHHHHHHHHhccCCCCCC--CchHH
Confidence            999999999999999999999999999999986521100000111112346899999999999998    664  59999


Q ss_pred             hhhcCChhHHHHHhHhHHHHHHhhhccCCchhhHhhHHHHHHHHHHHHHhCCCCHHHHHHHHHhHhCCCCccccccCCCC
Q 023745          198 RLLLDSKLLCSKIREEADELCRTLEENEDNSRTASEMADVLYHAMVLLALKDVKAEEVLEVLRKRFSHSGIEEKRSRVSE  277 (278)
Q Consensus       198 ~Ll~~g~~i~kKIgEEA~E~iiAa~~~~d~~eli~EaADLlYHllVlL~~~gv~l~dV~~eL~~R~~~SGi~EK~~R~~~  277 (278)
                      +||+++++|++||||||+|+++|+.++++++++++|+||||||++|+|+++||+|+||+++|.+||+++|++||++|..+
T Consensus       190 ~L~~~~~~I~kKlgEEA~EliiAa~~~~dre~lieElADLLyHlLVLl~~~GIsleeV~~eL~~R~~~~g~~ek~~r~~~  269 (271)
T PLN02346        190 RLLQDPELLCSKIREEAGELCQTLEENEGKERTASEMADVLYHAMVLLAKQGVKMEDVLEVLRKRFSQSGIEEKASRPPK  269 (271)
T ss_pred             HHhcCHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhhcccCccccccCccC
Confidence            99996699999999999999999844678999999999999999999999999999999999999999999999999764

>KOG4311 consensus Histidinol dehydrogenase [Amino acid transport and metabolism]

Probab=100.00  E-value=5.3e-61  Score=441.77  Aligned_cols=253  Identities=51%  Similarity=0.738  Sum_probs=217.6

Q ss_pred             Cccccccccccccccc--CCCccccccc---cccccceeccccC----CCCCCcchhhHHHhhhccccCC-CCeEEEEEE
Q 023745            1 MAVSYSQCVQSLKVSL--TGSDRCRDND---MKRNCLVFASSTE----SNSNPVLQSKVDRLLDSVKWDN-KGLAVAIAQ   70 (278)
Q Consensus         1 ~~~~~~~~~~~~~~~~--~~~~~~~~~~---~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~i~~d~-~GLiPaivQ   70 (278)
                      |++|+.+-.|++-+++  .|.++.++..   |..+..|..|...    .+|++..+..++.+++.++||+ +||+...|.
T Consensus        78 ~~~Sq~A~~~~~~~s~~niPker~v~~e~g~F~~q~~v~~sfsv~~~v~~K~~~k~~l~d~~L~~i~tDr~dgl~~tlvv  157 (359)
T KOG4311|consen   78 MAVSQNALAQSLARSSCNIPKERVVVEENGSFRDQKLVSRSFSVFACVDNKNIAKQALVDNLLDRIKTDRKDGLVATLVV  157 (359)
T ss_pred             HHHhHHHHHHHHHHhhccCCCcceecccCCccchHHHHhhccceeeeeccchHHHHHHHHHHHHHhccCCCCCeEEEEEe
Confidence            6889999999998887  5655533322   3222222211111    3666889999999999999997 567665555


Q ss_pred             ecCCCceEEEeecCHHHHHHHHhcCcEEEEeCCCCcceeccCCCCCeeEEEEEeccCCCCcEEEEEeeCCC-CCCCCCcc
Q 023745           71 NVDTGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSIIYLGKPDGP-TCHTGSET  149 (278)
Q Consensus        71 d~~tg~VLmlaymN~eAl~~Tl~tg~~~y~SRSr~~lW~KGetSG~~q~v~~i~~DCD~D~ll~~v~~~g~-aCHtg~~S  149 (278)
                      + ++|.|||++|.|+||+.+||.+|+++||||||++||.|||||||+|++.+|++|||+|||+|.|.|.|| +||+|+.+
T Consensus       158 ~-~~g~~Lglvysskes~a~ti~~g~gvy~SRsR~~lW~KGetSgn~q~ll~i~vDCD~D~l~f~v~q~g~gfCHl~t~~  236 (359)
T KOG4311|consen  158 V-DTGAVLGLVYSSKESLATTISSGKGVYFSRSRSTLWTKGETSGNFQNLLDIYVDCDRDSLIFLVTQDGPGFCHLGTET  236 (359)
T ss_pred             h-hhhhhhhhhcccHHHHHHHHhcCcceEEecccceeeeccccCcCceeeEEEeeccCccceEEEEecCCCcccccCcce
Confidence            4 799999999999999999999999999999999999999999999999999999999999999999998 99999999


Q ss_pred             cccccccccccCCCcCCCchhhhHHHHHHHHHHHHHhcCCCCCCchhhhhhcCChhHHHHHhHhHHHHHHhhhccCCchh
Q 023745          150 CYYTSVLDALKDQPVQGNNLAMTTLYSLESTISQRKAASKNGKPSWTKRLLLDSKLLCSKIREEADELCRTLEENEDNSR  229 (278)
Q Consensus       150 CF~~~~~~~~~~~~~~~~~~~~~~L~~L~~~I~~Rk~~~~e~~~SYT~~Ll~~g~~i~kKIgEEA~E~iiAa~~~~d~~e  229 (278)
                      ||++..                ..|..|+.+|.+||++.|++  |||++||.++..++.||.|||.|++.|..    +++
T Consensus       237 Cfg~~~----------------~gL~~LEs~l~~Rk~~aPee--SyTrRLftD~aLL~aKI~EEAeELc~a~~----k~e  294 (359)
T KOG4311|consen  237 CFGTSV----------------FGLYSLESILSKRKETAPEE--SYTRRLFTDDALLCAKIREEAEELCRALE----KNE  294 (359)
T ss_pred             eeeeec----------------hhhhhHHHHHHHhhhcCCch--hhHHHhhCChHHHHHHHHHHHHHHHHhhc----ccC
Confidence            998743                47999999999999998876  99999999999999999999999999863    456


Q ss_pred             hHhhHHHHHHHHHHHHHhCCCCHHHHHHHH----HhHhCCCCccc--cccCCC
Q 023745          230 TASEMADVLYHAMVLLALKDVKAEEVLEVL----RKRFSHSGIEE--KRSRVS  276 (278)
Q Consensus       230 li~EaADLlYHllVlL~~~gv~l~dV~~eL----~~R~~~SGi~E--K~~R~~  276 (278)
                      ++||+|||+||.|++|..+||+++||++.|    ++|+..+|+++  |.+|.+
T Consensus       295 ~~wEmADl~YfA~~~lv~~gVsl~Dv~~~LnmkhrKvtrrkGdak~~~Q~k~k  347 (359)
T KOG4311|consen  295 TPWEMADLLYFAMVLLVKRGVSLEDVLEVLNMKHRKVTRRKGDAKFVKQNKTK  347 (359)
T ss_pred             ChHHHHHHHHHHHHHHHhcCCcHHHHHHHhhhHHHhHhhhcchhhhhccccch
Confidence            999999999999999999999999999999    88888999998  666544

>COG0139 HisI Phosphoribosyl-AMP cyclohydrolase [Amino acid transport and metabolism]

Probab=100.00  E-value=4.2e-55  Score=355.90  Aligned_cols=103  Identities=47%  Similarity=0.865  Sum_probs=99.4

Q ss_pred             HhhhccccCCCCeEEEEEEecCCCceEEEeecCHHHHHHHHhcCcEEEEeCCCCcceeccCCCCCeeEEEEEeccCCCCc
Q 023745           52 RLLDSVKWDNKGLAVAIAQNVDTGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDS  131 (278)
Q Consensus        52 ~~~~~i~~d~~GLiPaivQd~~tg~VLmlaymN~eAl~~Tl~tg~~~y~SRSr~~lW~KGetSG~~q~v~~i~~DCD~D~  131 (278)
                      .++..++|+++|||||||||+.||+|||+||||+|||++|++||++|||||||++||+|||||||+|+|++|++|||+||
T Consensus         6 ~~~~~~~~~~~gLvpaIvQd~~t~eVLMlaymN~eAl~kTleTg~~~y~SRSR~~lW~KGetSG~~q~v~~i~~DCD~Da   85 (111)
T COG0139           6 ALLDELDFDKDGLVPAIVQDAETGEVLMLAYMNEEALAKTLETGEAHYYSRSRQELWTKGETSGHTQKVVEIRLDCDGDA   85 (111)
T ss_pred             hhhhhcccCCCCeEEEEEEecCCCcEEEEEecCHHHHHHHHhcCeEEEEEcchhhheccccccCceEEEEEEEcCCCCCE
Confidence            35678999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEeeCC-CCCCCCCccccccc
Q 023745          132 IIYLGKPDG-PTCHTGSETCYYTS  154 (278)
Q Consensus       132 ll~~v~~~g-~aCHtg~~SCF~~~  154 (278)
                      |||+|+|.| ||||||++||||+.
T Consensus        86 ll~~V~q~gg~aCHtG~~SCF~~~  109 (111)
T COG0139          86 LLLLVEQIGGPACHTGTRSCFYRA  109 (111)
T ss_pred             EEEEEEeCCCCcccCCCccccccc
Confidence            999999966 99999999999974

>PRK00051 hisI phosphoribosyl-AMP cyclohydrolase; Reviewed

Probab=100.00  E-value=4.9e-54  Score=357.07  Aligned_cols=105  Identities=42%  Similarity=0.810  Sum_probs=101.9

Q ss_pred             HhhhccccCCCCeEEEEEEecCCCceEEEeecCHHHHHHHHhcCcEEEEeCCCCcceeccCCCCCeeEEEEEeccCCCCc
Q 023745           52 RLLDSVKWDNKGLAVAIAQNVDTGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDS  131 (278)
Q Consensus        52 ~~~~~i~~d~~GLiPaivQd~~tg~VLmlaymN~eAl~~Tl~tg~~~y~SRSr~~lW~KGetSG~~q~v~~i~~DCD~D~  131 (278)
                      .+++.++||++|||||||||+.||+|||+||||+|||++||+||++|||||||++||+|||||||+|+|++|++|||+||
T Consensus         2 ~~~~~l~~~~~GLipaivqd~~tg~VLMlaymn~eAl~~Tl~tg~~~y~SRSR~~lW~KGetSG~~q~v~~i~~DCD~D~   81 (125)
T PRK00051          2 KILDRLKFDADGLVPAIAQDAETGEVLMVAWMNEEALAKTLETGRAHYWSRSRQKLWRKGETSGHVQKVHEVRLDCDGDA   81 (125)
T ss_pred             cHhhccccCCCCcEEEEEEECCCCCEEEEEEcCHHHHHHHHhcCcEEEEeCccCcccCCCCCcCCeEEEEEEEecCCCCE
Confidence            35678999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEeeCCCCCCCCCccccccccc
Q 023745          132 IIYLGKPDGPTCHTGSETCYYTSVL  156 (278)
Q Consensus       132 ll~~v~~~g~aCHtg~~SCF~~~~~  156 (278)
                      |||+|+|.|||||||++||||+++.
T Consensus        82 Ll~~V~q~G~aCHtg~~SCF~~~~~  106 (125)
T PRK00051         82 VLLKVEQVGAACHTGRRSCFYRKLE  106 (125)
T ss_pred             EEEEEEecCCcccCCCCCccceeec
Confidence            9999999999999999999999874

>PF01502 PRA-CH: Phosphoribosyl-AMP cyclohydrolase; InterPro: IPR002496 Phosphoribosyl-AMP cyclohydrolase 3

Probab=100.00  E-value=8e-44  Score=273.35  Aligned_cols=75  Identities=47%  Similarity=0.914  Sum_probs=66.4

Q ss_pred             EEeecCHHHHHHHHhcCcEEEEeCCCCcceeccCCCCCeeEEEEEeccCCCCcEEEEEeeCCCCCCCCCcccccc
Q 023745           79 MQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYT  153 (278)
Q Consensus        79 mlaymN~eAl~~Tl~tg~~~y~SRSr~~lW~KGetSG~~q~v~~i~~DCD~D~ll~~v~~~g~aCHtg~~SCF~~  153 (278)
                      |+||||+|||++||+||++|||||||++||+|||||||+|+|++|++|||+||||++|+|.||+||||++|||++
T Consensus         1 Mlaymn~eal~~Tl~tg~~~y~SRSR~~lW~KGetSG~~q~v~~i~~DCD~D~ll~~V~~~G~aCHtg~~SCF~r   75 (75)
T PF01502_consen    1 MLAYMNKEALEKTLETGRATYYSRSRNRLWRKGETSGNTQKVVEIRLDCDGDALLFKVEQVGPACHTGRRSCFYR   75 (75)
T ss_dssp             EEEEE-HHHHHHHHHHSB-EEEETTTTEEEETTTTTS--EEEEEEEE-TTSSEEEEEEEESS-SSTTSBSSS--E
T ss_pred             CceecCHHHHHHHHHhCcEEEEEccCCcEeeEECCCCCEEEEEEEEecCCCCeEEEEEEeCCCCccCCCCCCcCc
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999985

5.4.19 from EC catalyses the third step in the histidine biosynthetic pathway: 5-phosphoribosyl-AMP + H2O = 5-(5-phospho-D-ribosylaminoformimino)-1-(5-phospho-ribosyl) imidazole-4-carboxamide It requires Zn2+ ions for activity [].; GO: 0004635 phosphoribosyl-AMP cyclohydrolase activity, 0000105 histidine biosynthetic process; PDB: 1ZPS_B.

>PRK00400 hisE phosphoribosyl-ATP pyrophosphatase; Validated

Probab=100.00  E-value=2.7e-36  Score=245.08  Aligned_cols=101  Identities=41%  Similarity=0.562  Sum_probs=96.7

Q ss_pred             hHHHHHHHHHHHHHhcCCCCCCchhhhhhcCC-hhHHHHHhHhHHHHHHhhhccCCchhhHhhHHHHHHHHHHHHHhCCC
Q 023745          172 TTLYSLESTISQRKAASKNGKPSWTKRLLLDS-KLLCSKIREEADELCRTLEENEDNSRTASEMADVLYHAMVLLALKDV  250 (278)
Q Consensus       172 ~~L~~L~~~I~~Rk~~~~e~~~SYT~~Ll~~g-~~i~kKIgEEA~E~iiAa~~~~d~~eli~EaADLlYHllVlL~~~gv  250 (278)
                      .+|.+|+++|.+|+.++|++  |||++||.+| ++|+|||||||+|+++|++ ++|++++++|+||||||+||+|+++||
T Consensus         3 ~~l~~L~~~I~~Rk~~~~~~--SYT~~L~~~G~~ki~kKlgEEa~E~i~A~~-~~d~~~~i~E~ADLlYHllVlL~~~gv   79 (105)
T PRK00400          3 DTLERLAATIEERKGADPEG--SYTAKLLDKGLDKILKKVGEEATEVVIAAK-DGDREELVYEIADLLYHLLVLLAARGI   79 (105)
T ss_pred             cHHHHHHHHHHHHHhCCCCC--cHHHHHHHCCHHHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            47999999999999998866  9999999998 8999999999999999986 789999999999999999999999999


Q ss_pred             CHHHHHHHHHhHhCCCCccccccCC
Q 023745          251 KAEEVLEVLRKRFSHSGIEEKRSRV  275 (278)
Q Consensus       251 ~l~dV~~eL~~R~~~SGi~EK~~R~  275 (278)
                      +|+||++||.+||+++|++||++|+
T Consensus        80 ~~~dV~~eL~~R~~~~g~~ek~~r~  104 (105)
T PRK00400         80 SLEDVLAELERREGLSGLEEKASRK  104 (105)
T ss_pred             CHHHHHHHHHHHcCCccchhhccCC
Confidence            9999999999999999999999886

>COG0140 HisI Phosphoribosyl-ATP pyrophosphohydrolase [Amino acid transport and metabolism]

Probab=100.00  E-value=6.3e-33  Score=220.32  Aligned_cols=89  Identities=39%  Similarity=0.573  Sum_probs=84.6

Q ss_pred             HHHHHHHHHHHHhcCCCCCCchhhhhhcCC-hhHHHHHhHhHHHHHHhhhccCCchhhHhhHHHHHHHHHHHHHhCCCCH
Q 023745          174 LYSLESTISQRKAASKNGKPSWTKRLLLDS-KLLCSKIREEADELCRTLEENEDNSRTASEMADVLYHAMVLLALKDVKA  252 (278)
Q Consensus       174 L~~L~~~I~~Rk~~~~e~~~SYT~~Ll~~g-~~i~kKIgEEA~E~iiAa~~~~d~~eli~EaADLlYHllVlL~~~gv~l  252 (278)
                      |.+|+++|.+|++.+|++  |||++||++| ++|+|||||||+|+++|++ ++|++++++|+||||||+||+|++.||++
T Consensus         1 l~~L~~~i~~Rk~~~pe~--SYTa~L~~~G~~ki~kKvGEEa~E~~iAa~-~~d~e~l~~E~ADLlYH~lVlL~~~gv~l   77 (92)
T COG0140           1 LSELEAVIADRKNARPEG--SYTAKLLAKGIDKIAKKVGEEAVEVILAAK-DEDKEELVSEAADLLYHLLVLLAAQGLSL   77 (92)
T ss_pred             ChHHHHHHHHHHhcCCCc--hHHHHHHHCcHHHHHHHHhHHHHHHHHHHH-hcchHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence            468999999999999876  9999999998 9999999999999999986 67999999999999999999999999999


Q ss_pred             HHHHHHHHhHhCC
Q 023745          253 EEVLEVLRKRFSH  265 (278)
Q Consensus       253 ~dV~~eL~~R~~~  265 (278)
                      +||+++|.+||++
T Consensus        78 ~dV~~eL~~R~~~   90 (92)
T COG0140          78 EDVLRELERRHGK   90 (92)
T ss_pred             HHHHHHHHHHhhc
Confidence            9999999999986

>TIGR03188 histidine_hisI phosphoribosyl-ATP pyrophosphohydrolase

Probab=99.97  E-value=2.1e-31  Score=208.78  Aligned_cols=83  Identities=43%  Similarity=0.576  Sum_probs=78.7

Q ss_pred             HHHHHHHHHHHHhcCCCCCCchhhhhhcCC-hhHHHHHhHhHHHHHHhhhccCCchhhHhhHHHHHHHHHHHHHhCCCCH
Q 023745          174 LYSLESTISQRKAASKNGKPSWTKRLLLDS-KLLCSKIREEADELCRTLEENEDNSRTASEMADVLYHAMVLLALKDVKA  252 (278)
Q Consensus       174 L~~L~~~I~~Rk~~~~e~~~SYT~~Ll~~g-~~i~kKIgEEA~E~iiAa~~~~d~~eli~EaADLlYHllVlL~~~gv~l  252 (278)
                      |.+|+++|.+|+.++|++  |||++||++| ++|+|||||||+|+++|++ ++|++++++|+||||||+||+|+++||+|
T Consensus         1 l~~L~~~I~~R~~~~~~~--SYT~~L~~~G~~ki~kKvgEEa~E~iiAa~-~~d~~~~~~E~ADLlYHllVlL~~~gi~~   77 (84)
T TIGR03188         1 LEELEATIAERKAADPEG--SYTARLFAKGLDKILKKVGEEAVEVVIAAK-NGDKEELVYEAADLLYHLLVLLAAQGVSL   77 (84)
T ss_pred             CHHHHHHHHHHHhCCCCC--cHHHHHHhCcHHHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence            468999999999999866  9999999998 9999999999999999986 68999999999999999999999999999


Q ss_pred             HHHHHHH
Q 023745          253 EEVLEVL  259 (278)
Q Consensus       253 ~dV~~eL  259 (278)
                      +||++||
T Consensus        78 ~dV~~eL   84 (84)
T TIGR03188        78 EDVLAEL   84 (84)
T ss_pred             HHHHhhC
Confidence            9999986

This enzyme, phosphoribosyl-ATP pyrophosphohydrolase, catalyses the second step in the histidine biosynthesis pathway. It often occurs as a fusion protein. This model a somewhat narrower scope than Pfam model pfam01503, as some paralogs that appear to be functionally distinct are excluded from this model.

>PF01503 PRA-PH: Phosphoribosyl-ATP pyrophosphohydrolase; InterPro: IPR021130 Phosphoribosyl-ATP pyrophosphatase, 3

Probab=99.74  E-value=3.8e-18  Score=131.92  Aligned_cols=83  Identities=39%  Similarity=0.505  Sum_probs=74.2

Q ss_pred             HHHHHHHHHHHHhcCCCCCCchhhhhhcCChhHHHHHhHhHHHHHHhhhccCCchhhHhhHHHHHHHHHHHHHhCCCCHH
Q 023745          174 LYSLESTISQRKAASKNGKPSWTKRLLLDSKLLCSKIREEADELCRTLEENEDNSRTASEMADVLYHAMVLLALKDVKAE  253 (278)
Q Consensus       174 L~~L~~~I~~Rk~~~~e~~~SYT~~Ll~~g~~i~kKIgEEA~E~iiAa~~~~d~~eli~EaADLlYHllVlL~~~gv~l~  253 (278)
                      +.+|.++|.+|+...|.+  | |.+|+..   +++||+||+.|++.|++ ++|+.++++|+|||+||++++|..+|++++
T Consensus         1 v~ef~~~~~~~~~~~p~~--~-~~~l~~~---~~~kl~EE~~E~~~A~~-~~d~~~~~~e~aDlly~~~~~~~~~gi~~~   73 (83)
T PF01503_consen    1 VEEFHRTIDQRKKEAPEG--S-TKELLDL---RLKKLGEEAGELIEAAK-NGDKEEVADELADLLYHLLGLLASMGIDLD   73 (83)
T ss_dssp             HHHHHHHHHHCCHSSTTT--H-HHHHHHH---HHHHHHHHHHHHHHHHH-CSHHHHHHHHHHHHHHHHHHHHHHTT--HH
T ss_pred             CHHHHHHHHhHhhCCCCC--C-cHHHHHH---HHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence            467899999999997764  6 9999966   78999999999999986 679999999999999999999999999999


Q ss_pred             HHHHHHHhHh
Q 023745          254 EVLEVLRKRF  263 (278)
Q Consensus       254 dV~~eL~~R~  263 (278)
                      +|+++|++|+
T Consensus        74 ~v~~ev~~~N   83 (83)
T PF01503_consen   74 EVFDEVHRRN   83 (83)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHhcC
Confidence            9999999995

6.1.31 from EC catalyses the second step in the histidine biosynthetic pathway: 5-phosphoribosyl-ATP + H2O = 5-phosphoribosyl-AMP + PPi The Neurospora crassa enzyme also catalyzes the reactions of histidinol dehydrogenase (1.1.1.23 from EC) and phosphoribosyl-AMP cyclohydrolase (3.5.4.19 from EC). This entry also includes the Bacillus subtilis Cof proteins, which catalyze the hydrolysis of 4-amino-2-methyl-5-hydroxymethylpyrimidine pyrophosphate to 4-amino-2-methyl-5-hydroxymethylpyrimidine phosphate []. ; PDB: 2A7W_K 3NL9_A 1YXB_D 1YVW_A 2YFD_C 2YFC_B 2YF3_C 2YF4_A 2YEU_E 2YF9_A ....

>PF03819 MazG: MazG nucleotide pyrophosphohydrolase domain; InterPro: IPR004518 This domain is found in a group of prokaryotic proteins which includes Escherichia coli MazG

Probab=97.97  E-value=2.8e-05  Score=58.78  Aligned_cols=59  Identities=32%  Similarity=0.503  Sum_probs=50.7

Q ss_pred             hhHHHHHhHhHHHHHHhhhccCCchhhHhhHHHHHHHHHHHHHh----CCCCHHHHHHH----HHhHh
Q 023745          204 KLLCSKIREEADELCRTLEENEDNSRTASEMADVLYHAMVLLAL----KDVKAEEVLEV----LRKRF  263 (278)
Q Consensus       204 ~~i~kKIgEEA~E~iiAa~~~~d~~eli~EaADLlYHllVlL~~----~gv~l~dV~~e----L~~R~  263 (278)
                      ..++.|+.||+.|++-|.. .++.+++..|.||+++.++.++..    .|++++++++.    +.+|+
T Consensus         4 ~~~~~~l~eE~~El~~ai~-~~~~~~l~eElgDvl~~l~~la~~~~~~~~idle~~~~~~~~K~~~R~   70 (74)
T PF03819_consen    4 ESLLLKLIEEVGELAEAIR-KEDRENLEEELGDVLFYLLQLARILEERLGIDLEEALERKMEKLERRY   70 (74)
T ss_dssp             HHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHHHHHHCHTTSHHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHHHH-hcchHHHHHHHHHHHHHHHHHHHHHhHcCCCCHHHHHHHHHHHHhccC
Confidence            3467899999999999975 478899999999999999999997    99999998755    55665

The domain is about 100 amino acid residues in length and contains four conserved negatively charged residues that probably form an active site or metal binding site.; PDB: 1VMG_A 2YXH_B 2OIE_B 2OIG_C 2Q4P_A 2A3Q_B 2Q9L_C 2Q5Z_B 2Q73_A 3CRC_B ....

>TIGR00444 mazG MazG family protein

Probab=97.17  E-value=0.0012  Score=61.28  Aligned_cols=60  Identities=20%  Similarity=0.246  Sum_probs=51.0

Q ss_pred             hhHHHHHhHhHHHHHHhhhccCCchhhHhhHHHHHHHHHHH---HHhCC-CCHHHHHHH----HHhHhC
Q 023745          204 KLLCSKIREEADELCRTLEENEDNSRTASEMADVLYHAMVL---LALKD-VKAEEVLEV----LRKRFS  264 (278)
Q Consensus       204 ~~i~kKIgEEA~E~iiAa~~~~d~~eli~EaADLlYHllVl---L~~~g-v~l~dV~~e----L~~R~~  264 (278)
                      ..+..++.||+.|+..|.. ++|.+++..|..||||+++..   ....| ++++||+..    |.+||.
T Consensus        21 ~sl~~~l~EE~~El~~Ai~-~~d~~~l~eELGDlL~qvv~~a~iar~~g~f~~edvl~~~~~K~irRhp   88 (248)
T TIGR00444        21 QSLIPYTLEETYEVLEAIA-REDFDDLREELGDLLLQVVFYAQMAQEEGYFDFDDVCAGISEKLVRRHP   88 (248)
T ss_pred             HHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhch
Confidence            3478999999999999874 678899999999999999888   47899 999998876    556653

This family of prokaryotic proteins has no known function. It includes the uncharacterized protein MazG in E. coli.

>PRK09562 mazG nucleoside triphosphate pyrophosphohydrolase; Reviewed

Probab=97.10  E-value=0.0014  Score=61.21  Aligned_cols=88  Identities=20%  Similarity=0.292  Sum_probs=63.7

Q ss_pred             hHHHHHHHHHHHHHhcCCCCCCchhhhhhcCChhHHHHHhHhHHHHHHhhhccCCchhhHhhHHHHHHHHHHHHHhC---
Q 023745          172 TTLYSLESTISQRKAASKNGKPSWTKRLLLDSKLLCSKIREEADELCRTLEENEDNSRTASEMADVLYHAMVLLALK---  248 (278)
Q Consensus       172 ~~L~~L~~~I~~Rk~~~~e~~~SYT~~Ll~~g~~i~kKIgEEA~E~iiAa~~~~d~~eli~EaADLlYHllVlL~~~---  248 (278)
                      ..|.+|..+|.. ...++.| -.|...  +....+..|+.||+.|++.|.. ++|.+.+..|..||||+++.+-...   
T Consensus         7 ~~~~~l~~~~~~-lr~~~~G-cpWd~~--Qt~~sl~~~l~EE~~El~~ai~-~~d~~~l~eElGDvL~~vv~~a~~~~e~   81 (262)
T PRK09562          7 EAIDRLLEIMAR-LRDPEGG-CPWDKE--QTFASLAPYTIEEAYEVVDAIE-RGDLDDLREELGDLLLQVVFHAQMAEEQ   81 (262)
T ss_pred             HHHHHHHHHHHH-HhCCCCC-CCCCcc--cCHHHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            357778887763 3332222 234221  1124678999999999999875 5788999999999999988887777   


Q ss_pred             -CCCHHHHHHH----HHhHhC
Q 023745          249 -DVKAEEVLEV----LRKRFS  264 (278)
Q Consensus       249 -gv~l~dV~~e----L~~R~~  264 (278)
                       ++++++|++.    |.+||.
T Consensus        82 ~~~d~e~vl~~~~~K~~~R~p  102 (262)
T PRK09562         82 GAFDFADVVEAISDKLIRRHP  102 (262)
T ss_pred             CCCCHHHHHHHHHHHHhhhch
Confidence             8999998765    667774

>PRK09562 mazG nucleoside triphosphate pyrophosphohydrolase; Reviewed

Probab=96.73  E-value=0.0048  Score=57.69  Aligned_cols=60  Identities=27%  Similarity=0.445  Sum_probs=51.5

Q ss_pred             hhHHHHHhHhHHHHHHhhhccCCchhhHhhHHHHHHHHHHHHHhCCCCHHHHHHH----HHhHhC
Q 023745          204 KLLCSKIREEADELCRTLEENEDNSRTASEMADVLYHAMVLLALKDVKAEEVLEV----LRKRFS  264 (278)
Q Consensus       204 ~~i~kKIgEEA~E~iiAa~~~~d~~eli~EaADLlYHllVlL~~~gv~l~dV~~e----L~~R~~  264 (278)
                      ..+..|+.||..|+..|.. .++.+.+..|.+||||++..+-...|++++++++.    +.+||.
T Consensus       165 ~~~~~kl~EE~~El~~Ai~-~~~~~~l~eElGDlLf~lv~lAr~~~id~E~aL~~a~~Kf~rR~~  228 (262)
T PRK09562        165 EPVLDKVEEEIDELKEALA-QGDQAKIEEEFGDLLFALVNLARHLGIDPEAALRKANAKFERRFR  228 (262)
T ss_pred             HHHHHHHHHHHHHHHHHHH-ccChhhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhHH
Confidence            4577999999999999875 56889999999999999999999999999998765    555553

>COG1694 MazG Predicted pyrophosphatase [General function prediction only]

Probab=96.66  E-value=0.0089  Score=47.59  Aligned_cols=51  Identities=29%  Similarity=0.362  Sum_probs=43.5

Q ss_pred             hhHHHHHhHhHHHHHHhhhccCCchhhHhhHHHHHHHHHHHHHhCCCCHHH
Q 023745          204 KLLCSKIREEADELCRTLEENEDNSRTASEMADVLYHAMVLLALKDVKAEE  254 (278)
Q Consensus       204 ~~i~kKIgEEA~E~iiAa~~~~d~~eli~EaADLlYHllVlL~~~gv~l~d  254 (278)
                      ..++-.+.||+.|++.|..++.+.+++..|.+|+|++++.+....+++...
T Consensus        29 ~~~~~~l~eE~gEv~eai~~~~~~~~l~eELgDvL~~v~~~a~~~~~~~~~   79 (102)
T COG1694          29 ESLLLYLVEEAGEVAEAIRKEEDLEDLKEELGDVLADVLFLANLLDIDLEF   79 (102)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            566789999999999998755478899999999999999988888877743

>PRK12334 nucleoside triphosphate pyrophosphohydrolase; Reviewed

Probab=96.09  E-value=0.013  Score=55.44  Aligned_cols=84  Identities=19%  Similarity=0.349  Sum_probs=58.1

Q ss_pred             HHHHHHHHHHHHHhcCCCCCCchhhhhhcCChhHHHHHhHhHHHHHHhhhccCCchhhHhhHHHHHHHHHHHHHhCCCCH
Q 023745          173 TLYSLESTISQRKAASKNGKPSWTKRLLLDSKLLCSKIREEADELCRTLEENEDNSRTASEMADVLYHAMVLLALKDVKA  252 (278)
Q Consensus       173 ~L~~L~~~I~~Rk~~~~e~~~SYT~~Ll~~g~~i~kKIgEEA~E~iiAa~~~~d~~eli~EaADLlYHllVlL~~~gv~l  252 (278)
                      -|.+++++++.=+...     -|...  +.-..+..++.||+.|+..|.. ++|.+++..|..||||+++..-.-.++..
T Consensus        63 aL~~a~~I~~rlr~~g-----pWd~~--QTh~sl~~~l~EE~~El~eAI~-~~d~~~l~EELGDlLfqVvf~Aria~~~~  134 (277)
T PRK12334         63 RLLDAVAVMDRLRSPG-----PWESE--QTHRSLARYLLEETYELLDAIE-SGDRDELREELGDVLLQVLFHARIAEEAP  134 (277)
T ss_pred             HHHHHHHHHHHHhCCC-----CCCcc--cccHHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence            4677888776322211     12110  0013578999999999999874 67899999999999999998887776655


Q ss_pred             ------HHHHHH----HHhHhC
Q 023745          253 ------EEVLEV----LRKRFS  264 (278)
Q Consensus       253 ------~dV~~e----L~~R~~  264 (278)
                            +||++.    |.+||.
T Consensus       135 e~~F~~~dvl~~~~~KfirRhP  156 (277)
T PRK12334        135 EDPFDIDDVAATLVAKLVRRHP  156 (277)
T ss_pred             CCCCCHHHHHHHHHHHHHHHhH
Confidence                  466654    666663

>PRK12333 nucleoside triphosphate pyrophosphohydrolase; Reviewed

Probab=95.14  E-value=0.075  Score=48.46  Aligned_cols=60  Identities=25%  Similarity=0.227  Sum_probs=47.1

Q ss_pred             hhHHHHHhHhHHHHHHhhhccCCchhhHhhHHHHHHHHHH----HHHhCCCCHHHHHHH----HHhHhC
Q 023745          204 KLLCSKIREEADELCRTLEENEDNSRTASEMADVLYHAMV----LLALKDVKAEEVLEV----LRKRFS  264 (278)
Q Consensus       204 ~~i~kKIgEEA~E~iiAa~~~~d~~eli~EaADLlYHllV----lL~~~gv~l~dV~~e----L~~R~~  264 (278)
                      ..|..=+.||+.|++-|.. ++|.+++..|..|||+|.+.    .=..-..+++||++.    |-+||-
T Consensus        26 ~SL~~yllEE~yEv~dAI~-~~d~~~l~EELGDlLlqVvfha~iaee~g~F~~~DV~~~i~~KlirRHP   93 (204)
T PRK12333         26 ESLRPYLLEEAAEAVDALS-EGDPQELAEELGDVLLQVAFHSVIAEEEGRFTYPDVERGIVEKLIRRHP   93 (204)
T ss_pred             HHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHhcccCC
Confidence            4577889999999999875 67999999999999876554    444566889998766    566764

>TIGR00444 mazG MazG family protein

Probab=91.54  E-value=0.72  Score=43.08  Aligned_cols=60  Identities=25%  Similarity=0.380  Sum_probs=48.3

Q ss_pred             hhHHHHHhHhHHHHHHhhhcc-CCchhhHhhHHHHHHHHHHHHHhCCCCHHHHHHH----HHhHh
Q 023745          204 KLLCSKIREEADELCRTLEEN-EDNSRTASEMADVLYHAMVLLALKDVKAEEVLEV----LRKRF  263 (278)
Q Consensus       204 ~~i~kKIgEEA~E~iiAa~~~-~d~~eli~EaADLlYHllVlL~~~gv~l~dV~~e----L~~R~  263 (278)
                      ..+..||-||-.|+..|...+ ++++++-.|.+||||-+.-+....||+++.-+..    +.+||
T Consensus       154 ~~~~~k~~EE~~El~~a~~~~~~~~~~ieeElGDlLFalvnlAr~~giDpE~ALr~a~~KF~~Rf  218 (248)
T TIGR00444       154 SPVWDKVYEELDEVMYEARQAVVEQNKLEEEMGDLLFATVNLARHLKTDAEIALQKANEKFERRF  218 (248)
T ss_pred             HHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence            456789999999998776422 2457788999999999999999999999997764    45555

This family of prokaryotic proteins has no known function. It includes the uncharacterized protein MazG in E. coli.

>COG4696 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=89.55  E-value=0.86  Score=40.21  Aligned_cols=36  Identities=17%  Similarity=0.337  Sum_probs=31.4

Q ss_pred             hhhHhhHHHHHHHHHHHHHhCCCCHHHHHHHHHhHh
Q 023745          228 SRTASEMADVLYHAMVLLALKDVKAEEVLEVLRKRF  263 (278)
Q Consensus       228 ~eli~EaADLlYHllVlL~~~gv~l~dV~~eL~~R~  263 (278)
                      -..+.+.|||||+..=.|.-.||+++.|.++.++-.
T Consensus        93 ~gqvdalaDlLYfTYGslvlmGiDp~~iF~~VHrAN  128 (180)
T COG4696          93 IGQVDALADLLYFTYGSLVLMGIDPDAIFAAVHRAN  128 (180)
T ss_pred             hhHHHHHHHHHHHhhhhHHHhcCCHHHHHHHHHHhh
Confidence            346789999999999999999999999999987643

>PF04447 DUF550: Protein of unknown function (DUF550); InterPro: IPR007538 This entry represents the N terminus of a protein of unknown function, found in a range of Proteobacteria and a few P22-like dsDNA virus particles

Probab=86.74  E-value=2.5  Score=34.75  Aligned_cols=54  Identities=17%  Similarity=0.109  Sum_probs=43.0

Q ss_pred             hhHHHHHhHhHHHHHHhhhccCCchhhHhhHHHHHHHHHHHHHhCCCCHHHHHHHHHhHhC
Q 023745          204 KLLCSKIREEADELCRTLEENEDNSRTASEMADVLYHAMVLLALKDVKAEEVLEVLRKRFS  264 (278)
Q Consensus       204 ~~i~kKIgEEA~E~iiAa~~~~d~~eli~EaADLlYHllVlL~~~gv~l~dV~~eL~~R~~  264 (278)
                      ...++-+.+|+.|+..+      +.++ .|-||+++=++=.....|+++++|++.+..-..
T Consensus        21 ~g~lkHl~kE~~E~~~~------p~Dl-~EwaDv~~Ll~D~~~RaGis~~~i~~A~~~K~~   74 (100)
T PF04447_consen   21 VGPLKHLSKEALEAEAA------PGDL-SEWADVQILLWDGARRAGISPEQIIDAMEAKLA   74 (100)
T ss_pred             chHHHHHHHHHHHHHhC------CCCH-HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence            45789999999998764      2333 499999887777778999999999998876553

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	278
1zps_A	138	Crystal Structure Of Methanobacterium Thermoautotro		2e-18

>pdb|1ZPS|A Chain A, Crystal Structure Of Methanobacterium Thermoautotrophicum Phosphoribosyl-Amp Cyclohydrolase Hisi Length = 138

Iteration: 1
 Score = 89.7 bits (221), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 61/92 (66%)
Query: 64  LAVAIAQNVDTGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDI 123
           L +A+AQ+ +TG +LM  + NR+AL  T+ +  A ++S SR  LW KGE+S +   V+D+
Sbjct: 23  LIIAVAQDHETGEVLMVAYMNREALRRTLETGTAHYWSTSRGKLWLKGESSGHVQRVKDV 82
Query: 124 FLDCDRDSIIYLGKPDGPTCHTGSETCYYTSV 155
            +DCD D+++   + +G  CHTG  +C+Y S+
Sbjct: 83  LVDCDGDAVVLKVEQEGGACHTGYRSCFYRSI 114

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	278
1zps_A	138	PRA-CH, phosphoribosyl-AMP cyclohydrolase; histidi	5e-43
2a7w_A	116	PRA-PH, phosphoribosyl-ATP pyrophosphatase; struct	1e-27
1yvw_A	115	PRA-PH, phosphoribosyl-ATP pyrophosphatase; helix	2e-25
1y6x_A	93	Phosphoribosyl-ATP pyrophosphatase; helical bundle	1e-17
1yxb_A	98	PRA-PH, phosphoribosyl-ATP pyrophosphatase; struct	2e-16
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-08

>1zps_A PRA-CH, phosphoribosyl-AMP cyclohydrolase; histidine biosynthesis; 1.70A {Methanothermobacterthermautotrophicus} SCOP: b.168.1.1 Length = 138

 Score =  142 bits (361), Expect = 5e-43
 Identities = 37/100 (37%), Positives = 63/100 (63%)

Query: 56  SVKWDNKGLAVAIAQNVDTGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQ 115
               + + L +A+AQ+ +TG +LM  + NR+AL  T+ +  A ++S SR  LW KGE+S 
Sbjct: 15  RHNINGEDLIIAVAQDHETGEVLMVAYMNREALRRTLETGTAHYWSTSRGKLWLKGESSG 74

Query: 116 NFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSV 155
           +   V+D+ +DCD D+++   + +G  CHTG  +C+Y S+
Sbjct: 75  HVQRVKDVLVDCDGDAVVLKVEQEGGACHTGYRSCFYRSI 114

>2a7w_A PRA-PH, phosphoribosyl-ATP pyrophosphatase; structural genomics, PSI, protein structure initiative; 2.80A {Chromobacterium violaceum} SCOP: a.204.1.4 Length = 116

 Score =  102 bits (255), Expect = 1e-27
 Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 6/107 (5%)

Query: 171 MT--TLYSLESTISQRKAASKNGKPSWTKRLLLD-SKLLCSKIREEADELCRTLEENEDN 227
           MT   L ++  T+  R+ A+     S+   L       +  K+ EEA E      +++D 
Sbjct: 1   MTPDVLKNIADTLEARREAAPQS--SYVASLFHKGEDAILKKVAEEAAETLMA-SKDKDK 57

Query: 228 SRTASEMADVLYHAMVLLALKDVKAEEVLEVLRKRFSHSGIEEKRSR 274
                E+AD+ +H MVLL    ++ E+V+  L +R   SG++EK SR
Sbjct: 58  LHLVREVADLWFHTMVLLTYHGLRPEDVVMELHRREGISGLDEKASR 104

>1yvw_A PRA-PH, phosphoribosyl-ATP pyrophosphatase; helix bundle, histidine biosynthesis, structural genomics, PSI, protein structure initiative; 2.60A {Bacillus cereus} SCOP: a.204.1.4 Length = 115

 Score = 96.2 bits (240), Expect = 2e-25
 Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 5/104 (4%)

Query: 173 TLYSLESTISQRKAASKNGKPSWTKRLLLD-SKLLCSKIREEADELCRTLEENEDNSRTA 231
               L  TI +RK +      S+T  L       +  KI EE  E+     +N D     
Sbjct: 4   AFKLLYKTIEERKGSPLPE--SYTNYLFSKGEDKILKKIGEECAEVI-IACKNNDKEEVV 60

Query: 232 SEMADVLYHAMVLLALKDVKAEEVLEVLRKRFSH-SGIEEKRSR 274
            EM DV YH  VLLA K++  E+V+  +++R    S + ++R  
Sbjct: 61  KEMVDVFYHCFVLLAEKNIALEDVMREVKERNGKLSRVGDRREI 104

>1y6x_A Phosphoribosyl-ATP pyrophosphatase; helical bundle, histidine, hydrolase, ST genomics, PSI, protein structure initiative; 1.25A {Mycobacterium tuberculosis} SCOP: a.204.1.4 PDB: 3c90_X Length = 93

 Score = 75.0 bits (185), Expect = 1e-17
 Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 6/92 (6%)

Query: 170 AMTTLYSLESTISQRKAASKNGKPSWTKRLLLD-SKLLCSKIREEADELCRTLE-ENEDN 227
           A+ T   L + +  R         S T   L      L  K+ EEA E+   L  E+E N
Sbjct: 6   AVKTFEDLFAELGDRARTRPAD--STTVAALDGGVHALGKKLLEEAGEVW--LAAEHESN 61

Query: 228 SRTASEMADVLYHAMVLLALKDVKAEEVLEVL 259
              A E++ +LY   VL+  + +  ++V   L
Sbjct: 62  DALAEEISQLLYWTQVLMISRGLSLDDVYRKL 93

>1yxb_A PRA-PH, phosphoribosyl-ATP pyrophosphatase; structural genomics, PSI, protein structure initiative; 2.60A {Streptomyces coelicolor} SCOP: a.204.1.4 Length = 98

 Score = 72.4 bits (178), Expect = 2e-16
 Identities = 23/100 (23%), Positives = 45/100 (45%), Gaps = 13/100 (13%)

Query: 169 LAMTTLYSLESTISQRKAASKNGKP--SWTKRLL---LDSKLLCSKIREEADELCRTLE- 222
           ++  T   L + +  +     NG P  S T  L+   + +  +  K+ EEA E+   +  
Sbjct: 1   MSKKTFEELFTELQHKA---ANGDPATSRTAELVDKGVHA--IGKKVVEEAAEVW--MAA 53

Query: 223 ENEDNSRTASEMADVLYHAMVLLALKDVKAEEVLEVLRKR 262
           E E     A E++ +LYH  V++  + +  ++V   L + 
Sbjct: 54  EYEGKDAAAEEISQLLYHVQVMMVARGISLDDVYAHLLEH 93

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 52.9 bits (126), Expect = 5e-08
 Identities = 50/325 (15%), Positives = 91/325 (28%), Gaps = 93/325 (28%)

Query: 1   MAVSYSQCVQSLKVSLTGSDRCRD-NDMKRNCLVFASSTESN---SNPVLQSKVDRLLDS 56
               Y   +   + +   +  C+D  DM ++ L   S  E +    +    S   RL  +
Sbjct: 14  HQYQYKDILSVFEDAFVDNFDCKDVQDMPKSIL---SKEEIDHIIMSKDAVSGTLRLFWT 70

Query: 57  VKWDNKGLAVAIAQNVDTGAILMQGFANRDALATTIS------SRKATFYSRSRSTLWTK 110
           +   +K     + + V+    +++   N   L + I       S     Y   R  L+  
Sbjct: 71  LL--SKQ-EEMVQKFVEE---VLR--INYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYND 122

Query: 111 GET--------SQNFINVQDIFLDCDRDSIIYL------GKPDGPTCHTGSETCYYTSVL 156
            +          Q ++ ++   L+      + +      GK                + +
Sbjct: 123 NQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGK----------------TWV 166

Query: 157 --DALKDQPVQGNN------------------LAM--TTLYSLESTISQRKAASKNGK-- 192
             D      VQ                     L M    LY ++   + R   S N K  
Sbjct: 167 ALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLR 226

Query: 193 PSWTKRLLLDSKLLCSKIREEA----DEL------------CRTLEENEDNSRTASEMAD 236
               +  L   +LL SK  E        +            C+ L        T    A 
Sbjct: 227 IHSIQAEL--RRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAA 284

Query: 237 VLYHAMVLLALKDVKAEEVLEVLRK 261
              H  +      +  +EV  +L K
Sbjct: 285 TTTHISLDHHSMTLTPDEVKSLLLK 309

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	278
1zps_A	138	PRA-CH, phosphoribosyl-AMP cyclohydrolase; histidi	100.0
2a7w_A	116	PRA-PH, phosphoribosyl-ATP pyrophosphatase; struct	100.0
1yvw_A	115	PRA-PH, phosphoribosyl-ATP pyrophosphatase; helix	100.0
1y6x_A	93	Phosphoribosyl-ATP pyrophosphatase; helical bundle	99.97
1yxb_A	98	PRA-PH, phosphoribosyl-ATP pyrophosphatase; struct	99.97
2yxh_A	116	MAZG-related protein; TM0360, LEFT-handed superhel	98.94
2gta_A	119	Hypothetical protein YPJD; pyrophosphatase, NESG,	97.59
2q5z_A	114	MAZG, hypothetical protein; NTP-ppase, hydrolase;	97.57
1vmg_A	95	Hypothetical protein SSO3215; 13816655, MAZG nucle	97.55
2q73_A	100	MAZG, hypothetical protein; NTP-ppase, hydrolase;	97.49
2oie_A	111	RS21-C6; helix, hydrolase; 2.20A {Mus musculus} SC	97.47
2a3q_A	170	Hypothetical protein; MM.29898, BC004623, 2410015N	97.43
3obc_A	118	Pyrophosphatase; dimeric four alpha-helical bundle	97.06
3cra_A	265	Protein MAZG; tandem-repeat domain, hydrolase; 2.1	96.52
2yf4_A	154	MAZG-like nucleoside triphosphate pyrophosphohydr;	95.45
3cra_A	265	Protein MAZG; tandem-repeat domain, hydrolase; 2.1	93.82
2rfp_A	171	Putative NTP pyrophosphohydrolase; structural geno	93.68

>1zps_A PRA-CH, phosphoribosyl-AMP cyclohydrolase; histidine biosynthesis; 1.70A {Methanothermobacterthermautotrophicus} SCOP: b.168.1.1

Probab=100.00  E-value=4.3e-56  Score=373.25  Aligned_cols=104  Identities=37%  Similarity=0.710  Sum_probs=100.0

Q ss_pred             hhhccccCCCCeEEEEEEecCCCceEEEeecCHHHHHHHHhcCcEEEEeCCCCcceeccCCCCCeeEEEEEeccCCCCcE
Q 023745           53 LLDSVKWDNKGLAVAIAQNVDTGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSI  132 (278)
Q Consensus        53 ~~~~i~~d~~GLiPaivQd~~tg~VLmlaymN~eAl~~Tl~tg~~~y~SRSr~~lW~KGetSG~~q~v~~i~~DCD~D~l  132 (278)
                      +...++||++|||||||||+.||+|||+||||+|||++||+||++|||||||++||+|||||||+|+|++|++|||+|||
T Consensus        12 ~~~~~~~~~~GLipaIvQd~~tg~VLMlayMN~EAl~~Tl~tg~~~y~SRSR~~LW~KGetSG~~Q~v~~i~~DCD~D~L   91 (138)
T 1zps_A           12 LNFRHNINGEDLIIAVAQDHETGEVLMVAYMNREALRRTLETGTAHYWSTSRGKLWLKGESSGHVQRVKDVLVDCDGDAV   91 (138)
T ss_dssp             SCCCCCSSSCCCEEEEEEETTTCCEEEEEEECHHHHHHHHHHSBCEEEETTTTEEEETTTTTSCCEEEEEEEECTTSSEE
T ss_pred             hhcccccCCCCcEEEEEEECCCCCEEEEEecCHHHHHHHHhcCcEEEEcCCCCccccCccCCCCcEEEEEEEecCCCCEE
Confidence            34568999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEeeCCCCCCCCCccccccccc
Q 023745          133 IYLGKPDGPTCHTGSETCYYTSVL  156 (278)
Q Consensus       133 l~~v~~~g~aCHtg~~SCF~~~~~  156 (278)
                      |++|+|.|||||||++||||+.+.
T Consensus        92 L~~V~q~G~aCHtG~~SCF~~~~~  115 (138)
T 1zps_A           92 VLKVEQEGGACHTGYRSCFYRSID  115 (138)
T ss_dssp             EEEEEESSCSSTTSBSSSCCEEEE
T ss_pred             EEEEEecCCcccCCCCCcCccccc
Confidence            999999999999999999998763

>2a7w_A PRA-PH, phosphoribosyl-ATP pyrophosphatase; structural genomics, PSI, protein structure initiative; 2.80A {Chromobacterium violaceum} SCOP: a.204.1.4

Probab=100.00  E-value=1.4e-38  Score=261.29  Aligned_cols=102  Identities=29%  Similarity=0.461  Sum_probs=86.1

Q ss_pred             HHHHHHHHHHHHHhcCCCCCCchhhhhhcCC-hhHHHHHhHhHHHHHHhhhccCCchhhHhhHHHHHHHHHHHHHhCCCC
Q 023745          173 TLYSLESTISQRKAASKNGKPSWTKRLLLDS-KLLCSKIREEADELCRTLEENEDNSRTASEMADVLYHAMVLLALKDVK  251 (278)
Q Consensus       173 ~L~~L~~~I~~Rk~~~~e~~~SYT~~Ll~~g-~~i~kKIgEEA~E~iiAa~~~~d~~eli~EaADLlYHllVlL~~~gv~  251 (278)
                      +|.+|+++|.+|+.++|++  |||++||++| ++|+|||||||+|+++||+ ++|++++++|+||||||+||+|+++||+
T Consensus         5 ~L~~L~~~I~~Rk~~~pe~--SYT~~L~~kG~~kI~kKvgEEA~E~iiAak-~~d~~el~~E~ADLlYHllVlL~~~gv~   81 (116)
T 2a7w_A            5 VLKNIADTLEARREAAPQS--SYVASLFHKGEDAILKKVAEEAAETLMASK-DKDKLHLVREVADLWFHTMVLLTYHGLR   81 (116)
T ss_dssp             CHHHHHHHHHHGGGSCTTT--CHHHHHHHHCHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHHHhCCCCC--cHHHHHHHCCHHHHHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence            6999999999999999876  9999999998 9999999999999999986 7899999999999999999999999999


Q ss_pred             HHHHHHHHHhHhCCCCccccccCCCC
Q 023745          252 AEEVLEVLRKRFSHSGIEEKRSRVSE  277 (278)
Q Consensus       252 l~dV~~eL~~R~~~SGi~EK~~R~~~  277 (278)
                      |+||++||.+|+++|||+||++|+..
T Consensus        82 l~dV~~eL~~R~~~sg~~eK~~R~~~  107 (116)
T 2a7w_A           82 PEDVVMELHRREGISGLDEKASRKPT  107 (116)
T ss_dssp             HHHHHHHHHHHCC-------------
T ss_pred             HHHHHHHHHHHhcccCcchhccCCCc
Confidence            99999999999999999999999753

>1yvw_A PRA-PH, phosphoribosyl-ATP pyrophosphatase; helix bundle, histidine biosynthesis, structural genomics, PSI, protein structure initiative; 2.60A {Bacillus cereus} SCOP: a.204.1.4

Probab=100.00  E-value=3e-37  Score=252.94  Aligned_cols=100  Identities=30%  Similarity=0.426  Sum_probs=88.0

Q ss_pred             hHHHHHHHHHHHHHhcCCCCCCchhhhhhcCC-hhHHHHHhHhHHHHHHhhhccCCchhhHhhHHHHHHHHHHHHHhCCC
Q 023745          172 TTLYSLESTISQRKAASKNGKPSWTKRLLLDS-KLLCSKIREEADELCRTLEENEDNSRTASEMADVLYHAMVLLALKDV  250 (278)
Q Consensus       172 ~~L~~L~~~I~~Rk~~~~e~~~SYT~~Ll~~g-~~i~kKIgEEA~E~iiAa~~~~d~~eli~EaADLlYHllVlL~~~gv  250 (278)
                      .+|.+|+++|.+|+.++|++  |||++||++| ++|+|||||||+|+++||+ ++|++++++|+||||||+||+|+++||
T Consensus         3 ~~L~~L~~~I~~Rk~~~pe~--SYT~~L~~kG~~kI~kKvgEEA~E~iiAak-~~d~~~l~~E~ADLlYHllVlL~~~gv   79 (115)
T 1yvw_A            3 NAFKLLYKTIEERKGSPLPE--SYTNYLFSKGEDKILKKIGEECAEVIIACK-NNDKEEVVKEMVDVFYHCFVLLAEKNI   79 (115)
T ss_dssp             -CHHHHHHHHHHHHHSCCTT--SHHHHHHHHCHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             hHHHHHHHHHHHHHcCCCCC--cHHHHHHHCcHHHHHHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            36999999999999999876  9999999998 9999999999999999986 789999999999999999999999999


Q ss_pred             CHHHHHHHHHhHhCCCCccccccCCC
Q 023745          251 KAEEVLEVLRKRFSHSGIEEKRSRVS  276 (278)
Q Consensus       251 ~l~dV~~eL~~R~~~SGi~EK~~R~~  276 (278)
                      +|+||++||.+|++  ||+||++|+.
T Consensus        80 ~l~dV~~eL~~R~~--gi~eK~~R~~  103 (115)
T 1yvw_A           80 ALEDVMREVKERNG--KLSRVGDRRE  103 (115)
T ss_dssp             CHHHHHHHHHHHHH--HC--------
T ss_pred             CHHHHHHHHHHHhC--CchhhccCCc
Confidence            99999999999998  9999999975

>1y6x_A Phosphoribosyl-ATP pyrophosphatase; helical bundle, histidine, hydrolase, ST genomics, PSI, protein structure initiative; 1.25A {Mycobacterium tuberculosis} SCOP: a.204.1.4 PDB: 3c90_X

Probab=99.97  E-value=1.5e-32  Score=217.83  Aligned_cols=86  Identities=27%  Similarity=0.327  Sum_probs=81.7

Q ss_pred             hhHHHHHHHHHHHHHhcCCCCCCchhhhhhcCC-hhHHHHHhHhHHHHHHhhhccCCchhhHhhHHHHHHHHHHHHHhCC
Q 023745          171 MTTLYSLESTISQRKAASKNGKPSWTKRLLLDS-KLLCSKIREEADELCRTLEENEDNSRTASEMADVLYHAMVLLALKD  249 (278)
Q Consensus       171 ~~~L~~L~~~I~~Rk~~~~e~~~SYT~~Ll~~g-~~i~kKIgEEA~E~iiAa~~~~d~~eli~EaADLlYHllVlL~~~g  249 (278)
                      +.+|.+|+++|.+|+.++|++  |||++||++| ++|+|||||||+|+++||+ ++|++++++|+||||||+||+|+++|
T Consensus         7 ~~~l~~L~~~I~~Rk~~~pe~--SYT~~L~~~G~~ki~kKvgEEA~E~iiAak-~~~~~~l~~E~ADLlYHllVlL~~~g   83 (93)
T 1y6x_A            7 VKTFEDLFAELGDRARTRPAD--STTVAALDGGVHALGKKLLEEAGEVWLAAE-HESNDALAEEISQLLYWTQVLMISRG   83 (93)
T ss_dssp             CCSHHHHHHHHHHHHHHCCTT--CHHHHHHHTCHHHHHHHHHHHHHHHHHHHH-HSCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hhHHHHHHHHHHHHHcCCCCC--cHHHHHHHCcHHHHHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHHHHHHcC
Confidence            468999999999999999876  9999999999 9999999999999999986 78999999999999999999999999


Q ss_pred             CCHHHHHHHH
Q 023745          250 VKAEEVLEVL  259 (278)
Q Consensus       250 v~l~dV~~eL  259 (278)
                      |+|+||++||
T Consensus        84 v~l~dV~~eL   93 (93)
T 1y6x_A           84 LSLDDVYRKL   93 (93)
T ss_dssp             CCHHHHHTTC
T ss_pred             CCHHHHHhhC
Confidence            9999999876

>1yxb_A PRA-PH, phosphoribosyl-ATP pyrophosphatase; structural genomics, PSI, protein structure initiative; 2.60A {Streptomyces coelicolor} SCOP: a.204.1.4

Probab=99.97  E-value=1.3e-32  Score=219.91  Aligned_cols=90  Identities=23%  Similarity=0.337  Sum_probs=80.0

Q ss_pred             hhHHHHHHHHHHHHHhc-CCCCCCchhhhhhcCC-hhHHHHHhHhHHHHHHhhhccCCchhhHhhHHHHHHHHHHHHHhC
Q 023745          171 MTTLYSLESTISQRKAA-SKNGKPSWTKRLLLDS-KLLCSKIREEADELCRTLEENEDNSRTASEMADVLYHAMVLLALK  248 (278)
Q Consensus       171 ~~~L~~L~~~I~~Rk~~-~~e~~~SYT~~Ll~~g-~~i~kKIgEEA~E~iiAa~~~~d~~eli~EaADLlYHllVlL~~~  248 (278)
                      +.+|.+|+++|.+|+.+ +|++  |||++||++| ++|+|||||||+|+++||+ ++|++++++|+||||||+||+|+++
T Consensus         3 ~~~L~~L~~~I~~Rk~~~~pe~--SYT~~L~~kG~~kI~kKvgEEA~E~iiAak-~~d~~~l~~E~ADLlYHllVlL~~~   79 (98)
T 1yxb_A            3 KKTFEELFTELQHKAANGDPAT--SRTAELVDKGVHAIGKKVVEEAAEVWMAAE-YEGKDAAAEEISQLLYHVQVMMVAR   79 (98)
T ss_dssp             -CCHHHHHHHHHHHTCC----C--CSSCCHHHHCHHHHHHHHHHHHHHHHHHHH-HSCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hhHHHHHHHHHHHHHhCCCCCC--cHHHHHHHCcHHHHHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHHHHHHc
Confidence            35799999999999999 8866  9999999998 9999999999999999986 6899999999999999999999999


Q ss_pred             CCCHHHHHHHHHhHh
Q 023745          249 DVKAEEVLEVLRKRF  263 (278)
Q Consensus       249 gv~l~dV~~eL~~R~  263 (278)
                      ||+|+||++||+.-|
T Consensus        80 gv~l~dV~~eL~~~~   94 (98)
T 1yxb_A           80 GISLDDVYAHLLEHH   94 (98)
T ss_dssp             TCCHHHHHHHCC---
T ss_pred             CCCHHHHHHHHHHhh
Confidence            999999999998765

>2yxh_A MAZG-related protein; TM0360, LEFT-handed superhelix fold, structural genomics; 2.00A {Thermotoga maritima}

Probab=98.94  E-value=2.3e-09  Score=87.09  Aligned_cols=83  Identities=19%  Similarity=0.368  Sum_probs=69.1

Q ss_pred             HHHHHHHHHHHHhcCCCCCCchhhhhhcCChhHHHHHhHhHHHHHHhhhccCCchhhHhhHHHHHHHHHHHHHhC----C
Q 023745          174 LYSLESTISQRKAASKNGKPSWTKRLLLDSKLLCSKIREEADELCRTLEENEDNSRTASEMADVLYHAMVLLALK----D  249 (278)
Q Consensus       174 L~~L~~~I~~Rk~~~~e~~~SYT~~Ll~~g~~i~kKIgEEA~E~iiAa~~~~d~~eli~EaADLlYHllVlL~~~----g  249 (278)
                      |.+|..+| -|...    .-+|+.  ++....++.||.||+.|++.|.. +++++++..|.+|||||++.+....    |
T Consensus         2 ~~~l~~i~-lR~~~----G~~W~~--~qt~~~l~~~l~EE~~El~eai~-~~d~~~l~eElGDlLf~vv~la~~~~~~~~   73 (116)
T 2yxh_A            2 VERLLEII-ERSLR----KCPWLE--KQSIETLLEALASEIEEVAEAVK-KNDLANLEEEIGDMIYDALLVAAVAQRDYG   73 (116)
T ss_dssp             HHHHHHHH-HHHHH----HCHHHH--TCCHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHH-ccCCC----CCCCCc--ccCHHHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHHHHHHhHcCC
Confidence            57888999 77632    236766  33346788999999999999875 5689999999999999999999887    9


Q ss_pred             CCHHHHHHH----HHhHhC
Q 023745          250 VKAEEVLEV----LRKRFS  264 (278)
Q Consensus       250 v~l~dV~~e----L~~R~~  264 (278)
                      +++++|++.    +.+||.
T Consensus        74 ~d~e~al~~~~~K~~rR~~   92 (116)
T 2yxh_A           74 IDLESAIQKVVEKISHRKP   92 (116)
T ss_dssp             CCHHHHHHHHHHHHHHHCG
T ss_pred             CCHHHHHHHHHHHHHHHhH
Confidence            999999998    999985

>2gta_A Hypothetical protein YPJD; pyrophosphatase, NESG, structural genomics, PSI, protein structure initiative; 2.90A {Bacillus subtilis} SCOP: a.204.1.2

Probab=97.59  E-value=0.00018  Score=58.05  Aligned_cols=60  Identities=27%  Similarity=0.452  Sum_probs=48.3

Q ss_pred             hhHHHHHhHhHHHHHHhhhc---------cCCchhhHhhHHHHHHHHHHHHHhCCCCHHHHHHHHHhHh
Q 023745          204 KLLCSKIREEADELCRTLEE---------NEDNSRTASEMADVLYHAMVLLALKDVKAEEVLEVLRKRF  263 (278)
Q Consensus       204 ~~i~kKIgEEA~E~iiAa~~---------~~d~~eli~EaADLlYHllVlL~~~gv~l~dV~~eL~~R~  263 (278)
                      ..++.||.||+.|+..|..+         .+.++.+..|.|||||.++.+....||++++++..=..++
T Consensus        28 ~~~~~kL~EE~gEl~eai~~~~~~~~~~~~~~~~~l~eELGDvLf~lv~lA~~l~idle~al~~~~~K~   96 (119)
T 2gta_A           28 LAMMARLTEELGELAREVNHRYGEKPKKATEDDKSMEEEIGDVLFVLVCLANSLDISLEEAHDRVMHKF   96 (119)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTSSSCCCSSCSCSHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHH
Confidence            45678999999999887542         1123689999999999999999999999999887644433

>2q5z_A MAZG, hypothetical protein; NTP-ppase, hydrolase; 2.30A {Vibrio SP}

Probab=97.57  E-value=0.00019  Score=57.51  Aligned_cols=58  Identities=28%  Similarity=0.322  Sum_probs=47.8

Q ss_pred             hHHHHHhHhHHHHHHhhhcc--------CCchhhHhhHHHHHHHHHHHHHhCCCCHHHHHHHHHhH
Q 023745          205 LLCSKIREEADELCRTLEEN--------EDNSRTASEMADVLYHAMVLLALKDVKAEEVLEVLRKR  262 (278)
Q Consensus       205 ~i~kKIgEEA~E~iiAa~~~--------~d~~eli~EaADLlYHllVlL~~~gv~l~dV~~eL~~R  262 (278)
                      .+..||.||+.|+..+..+.        ++++++..|.|||||.++.+....||+++++++.-.++
T Consensus        42 ~~~~kL~eE~gEl~e~i~~~~~~~~~~~~~~~~l~eELgDvL~~l~~LA~~lgiDle~al~~k~~K  107 (114)
T 2q5z_A           42 HYFFKLIEEVGELSESIRKGKSGQPTLDELKGSVAEELYDVLYYVCALANIHGVNLEKTRELKEVL  107 (114)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCSCCCGGGCTTCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhccccccccchHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHHHHHH
Confidence            45689999999998876432        13678999999999999999999999999988774443

>1vmg_A Hypothetical protein SSO3215; 13816655, MAZG nucleotide pyrophosphohydrolase, structural G JCSG, protein structure initiative, PSI; HET: MSE; 1.46A {Sulfolobus solfataricus} SCOP: a.204.1.2

Probab=97.55  E-value=0.00014  Score=57.21  Aligned_cols=54  Identities=24%  Similarity=0.310  Sum_probs=47.2

Q ss_pred             hhHHHHHhHhHHHHHHhhhccCCchhhHhhHHHHHHHHHHHHHhCCCCHHHHHHH
Q 023745          204 KLLCSKIREEADELCRTLEENEDNSRTASEMADVLYHAMVLLALKDVKAEEVLEV  258 (278)
Q Consensus       204 ~~i~kKIgEEA~E~iiAa~~~~d~~eli~EaADLlYHllVlL~~~gv~l~dV~~e  258 (278)
                      ..+..|+.||..|+..|.. .++++++..|.|||||.++.+....||++++.++.
T Consensus        38 ~~~~~kl~EE~gEl~eai~-~~~~~~i~eELgDvLf~lv~lA~~lgiD~e~al~~   91 (95)
T 1vmg_A           38 YATFTWLVEEVGELAEALL-SNNLDSIQEELADVIAWTVSIANLEGIDIEEALKK   91 (95)
T ss_dssp             HHHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHH
Confidence            4567899999999988765 35788999999999999999999999999998753

>2q73_A MAZG, hypothetical protein; NTP-ppase, hydrolase; 1.80A {Vibrio SP} PDB: 2q9l_A

Probab=97.49  E-value=0.00024  Score=55.58  Aligned_cols=54  Identities=28%  Similarity=0.367  Sum_probs=45.2

Q ss_pred             hHHHHHhHhHHHHHHhhhccC--------CchhhHhhHHHHHHHHHHHHHhCCCCHHHHHHH
Q 023745          205 LLCSKIREEADELCRTLEENE--------DNSRTASEMADVLYHAMVLLALKDVKAEEVLEV  258 (278)
Q Consensus       205 ~i~kKIgEEA~E~iiAa~~~~--------d~~eli~EaADLlYHllVlL~~~gv~l~dV~~e  258 (278)
                      ..+.||.||+.|+..+.....        +++++..|.||+||.++.+....||+++++++.
T Consensus        22 ~~~~kL~eE~gEl~e~~~~~~~~~~~~~~~~~~i~eELgDvL~~l~~lA~~lgiDle~al~~   83 (100)
T 2q73_A           22 HYFFKLIEEVGELSESIRKGKSGQPTLDELKGSVAEELYDVLYYVCALANIHGVNLEKTHEL   83 (100)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCSCCCGGGCTTCHHHHHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHH
Confidence            456799999999988754321        247899999999999999999999999998765

>2oie_A RS21-C6; helix, hydrolase; 2.20A {Mus musculus} SCOP: a.204.1.2 PDB: 2oig_A*

Probab=97.47  E-value=0.00013  Score=57.69  Aligned_cols=55  Identities=20%  Similarity=0.199  Sum_probs=45.8

Q ss_pred             hhHHHHHhHhHHHHHHhhhc------------cCCchhhHhhHHHHHHHHHHHHHhCCCCHHHHHHH
Q 023745          204 KLLCSKIREEADELCRTLEE------------NEDNSRTASEMADVLYHAMVLLALKDVKAEEVLEV  258 (278)
Q Consensus       204 ~~i~kKIgEEA~E~iiAa~~------------~~d~~eli~EaADLlYHllVlL~~~gv~l~dV~~e  258 (278)
                      ..++.||.||+.|+..+...            .++++++..|.||+||.++.+....||++++++..
T Consensus        39 ~~~~~~L~eE~gEl~e~~~~~~~~~~~~~~~~~~~~~~l~eElgDvL~~l~~lA~~lgiDle~al~~  105 (111)
T 2oie_A           39 RNLLLALVGEVGELAELFQWKSDTEPGPQAWPPKERAALQEELSDVLIYLVALAARCHVDLPQAVIS  105 (111)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCCCCSSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHH
Confidence            45678999999999877541            12467899999999999999999999999998753

>2a3q_A Hypothetical protein; MM.29898, BC004623, 2410015N17RIK, structural genomics, PROT structure initiative, PSI; 2.32A {Mus musculus} SCOP: a.204.1.2 PDB: 2q4p_A

Probab=97.43  E-value=0.00019  Score=61.73  Aligned_cols=61  Identities=21%  Similarity=0.262  Sum_probs=50.8

Q ss_pred             hhHHHHHhHhHHHHHHhhhcc------------CCchhhHhhHHHHHHHHHHHHHhCCCCHHHHHHH----HHhHhC
Q 023745          204 KLLCSKIREEADELCRTLEEN------------EDNSRTASEMADVLYHAMVLLALKDVKAEEVLEV----LRKRFS  264 (278)
Q Consensus       204 ~~i~kKIgEEA~E~iiAa~~~------------~d~~eli~EaADLlYHllVlL~~~gv~l~dV~~e----L~~R~~  264 (278)
                      ..++.||.||+.|++.+....            ++++++..|.+||||.++.+....||++++++..    +.+||.
T Consensus        54 ~~l~~~L~EEvgEL~eai~~~~~~~~g~~~~~~~~~e~l~eELGDVL~~lv~LA~~lgIDleeAl~~k~~K~~~Ryp  130 (170)
T 2a3q_A           54 RNLLLALVGEVGELAELFQWKSDTEPGPQAWPPKERAALQEELSDVLIYLVALAARCHVDLPQAVISKMDTNRQRYP  130 (170)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCSSSCCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcc
Confidence            456789999999998876421            2567899999999999999999999999997754    777885

>3obc_A Pyrophosphatase; dimeric four alpha-helical bundle, structural genomics, JOIN for structural genomics, JCSG; HET: MSE PGE; 1.80A {Archaeoglobus fulgidus} SCOP: a.204.1.0

Probab=97.06  E-value=0.00076  Score=55.18  Aligned_cols=63  Identities=21%  Similarity=0.300  Sum_probs=50.4

Q ss_pred             CChhHHHHHhHhHHHHHHhhhc-c----------CCchhhHhhHHHHHHHHHHHHHhCCCCHHHHHHH----HHhHhC
Q 023745          202 DSKLLCSKIREEADELCRTLEE-N----------EDNSRTASEMADVLYHAMVLLALKDVKAEEVLEV----LRKRFS  264 (278)
Q Consensus       202 ~g~~i~kKIgEEA~E~iiAa~~-~----------~d~~eli~EaADLlYHllVlL~~~gv~l~dV~~e----L~~R~~  264 (278)
                      .+..++-.+.+||.|++.+... .          ++++++..|.||+|+.++.+....||++++++..    +++|+-
T Consensus        34 ~Pknlal~L~~EaGELae~fqwg~~~~~~~~~~~~~~~~l~eELADVL~Yl~~LA~~lgIDLeea~~~Km~Kn~~RYP  111 (118)
T 3obc_A           34 TPKNLAVSISIEVAELLEIFQWTRSSDEEFEVLERRKGEVEEEIADVLIYLLFLCDVAEINPIEAVKRKMEKNERKYP  111 (118)
T ss_dssp             CHHHHHHHHHHHHHHHHHHTTTCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHSC
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHhCC
Confidence            3455678999999999987653 1          2357899999999999999999999999997654    666654

>3cra_A Protein MAZG; tandem-repeat domain, hydrolase; 2.10A {Escherichia coli} PDB: 3crc_A*

Probab=96.52  E-value=0.0048  Score=56.72  Aligned_cols=87  Identities=18%  Similarity=0.321  Sum_probs=59.6

Q ss_pred             HHHHHHHHHHHHHhcCCCCCCchhhhhhcCChhHHHHHhHhHHHHHHhhhccCCchhhHhhHHHHHHHHHH---HHHhCC
Q 023745          173 TLYSLESTISQRKAASKNGKPSWTKRLLLDSKLLCSKIREEADELCRTLEENEDNSRTASEMADVLYHAMV---LLALKD  249 (278)
Q Consensus       173 ~L~~L~~~I~~Rk~~~~e~~~SYT~~Ll~~g~~i~kKIgEEA~E~iiAa~~~~d~~eli~EaADLlYHllV---lL~~~g  249 (278)
                      -|.+|..++. |...|..| -.|...  +.-..|..=+.||+.|++-|.. ++|.+++..|..|||++++.   +....|
T Consensus         5 ~~~~L~~im~-~LR~p~~g-CPWD~~--QT~~Sl~~yl~eE~~Ev~daI~-~~d~~~l~eELGDvLlqVvf~a~ia~e~g   79 (265)
T 3cra_A            5 QIDRLLTIMQ-RLRDPENG-CPWDKE--QTFATIAPYTLEETYEVLDAIA-REDFDDLRGELGDLLFQVVFYAQMAQEEG   79 (265)
T ss_dssp             HHHHHHHHHH-HHHCTTTC-CSSGGG--CCHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             HHHHHHHHHH-HHhCCCCC-CCCCcc--cCHHHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            4677777776 45543211 234322  1114678899999999999975 67999999999999986663   344455


Q ss_pred             -CCHHHHHHH----HHhHhC
Q 023745          250 -VKAEEVLEV----LRKRFS  264 (278)
Q Consensus       250 -v~l~dV~~e----L~~R~~  264 (278)
                       ++++||++.    |.+||-
T Consensus        80 ~F~~~dV~~~~~~KlirRhP   99 (265)
T 3cra_A           80 RFDFNDICAAISDKLERRHP   99 (265)
T ss_dssp             SCCHHHHHHHHHHHHHTC--
T ss_pred             CCCHHHHHHHHHHHHHhhCC
Confidence             999997764    778885

>2yf4_A MAZG-like nucleoside triphosphate pyrophosphohydr; hydrolase, dimeric dutpase; HET: GOL; 1.70A {Deinococcus radiodurans} PDB: 2yf3_A* 2yeu_A* 2yf9_A 2yfc_A* 2yfd_A*

Probab=95.45  E-value=0.024  Score=48.31  Aligned_cols=54  Identities=26%  Similarity=0.352  Sum_probs=46.2

Q ss_pred             HHHhHhHHHHHH-------------hhhccCCchhhHhhHHHHHHHHHHHHHhCCCCHHHHHHHHHhH
Q 023745          208 SKIREEADELCR-------------TLEENEDNSRTASEMADVLYHAMVLLALKDVKAEEVLEVLRKR  262 (278)
Q Consensus       208 kKIgEEA~E~ii-------------Aa~~~~d~~eli~EaADLlYHllVlL~~~gv~l~dV~~eL~~R  262 (278)
                      .=+.||..|+..             |. .+.|.-+++.+.+||+|-++=.+...||.++.|++|.++=
T Consensus        48 ~li~EEl~E~~e~~~~~~~~~~~~~A~-~~~dlve~aDAL~DllYv~~G~~~~~Gid~~~vf~eVh~S  114 (154)
T 2yf4_A           48 TLLDEESAEVRAEIDHLLARQAAGEAL-SAGDLAPLAHELADLLYVTYGALDQLGIDADAVFAEVHRA  114 (154)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTCCC-CGGGGHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhhcc-ccccHHHHHHHHhChhhHHHHHHHHcCCCHHHHHHHHHHH
Confidence            457788889887             43 3567889999999999999999999999999999998764

>3cra_A Protein MAZG; tandem-repeat domain, hydrolase; 2.10A {Escherichia coli} PDB: 3crc_A*

Probab=93.82  E-value=0.16  Score=46.56  Aligned_cols=61  Identities=28%  Similarity=0.378  Sum_probs=49.9

Q ss_pred             hhHHHHHhHhHHHHHHhhh-ccCCchhhHhhHHHHHHHHHHHHHhCCCCHHHHHHH----HHhHhC
Q 023745          204 KLLCSKIREEADELCRTLE-ENEDNSRTASEMADVLYHAMVLLALKDVKAEEVLEV----LRKRFS  264 (278)
Q Consensus       204 ~~i~kKIgEEA~E~iiAa~-~~~d~~eli~EaADLlYHllVlL~~~gv~l~dV~~e----L~~R~~  264 (278)
                      .....||.||..|+..|.. ..++++.+..|.+||||-+.-+-...||++++-++.    +.+||.
T Consensus       165 ~~v~~Kl~EEl~El~eal~~~~~~~~~ieeElGDlLFalVnlAR~~gIDpE~ALr~an~KF~~Rf~  230 (265)
T 3cra_A          165 GPVVDKVYEEIDEVMYEARQAVVDQAKLEEEMGDLLFATVNLARHLGTKAEIALQKANEKFERRFR  230 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence            4567899999999987652 235788899999999999999999999999986665    666664

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	278
d1zpsa1	124	b.168.1.1 (A:8-131) Phosphoribosyl-AMP cyclohydrol	6e-31
d2a7wa1	91	a.204.1.4 (A:4-94) Phosphoribosyl-ATP pyrophosphat	4e-21
d1yvwa1	92	a.204.1.4 (A:4-95) Phosphoribosyl-ATP pyrophosphat	6e-20
d1y6xa1	87	a.204.1.4 (A:7-93) Phosphoribosyl-ATP pyrophosphat	1e-19
d1yxba1	88	a.204.1.4 (A:4-91) Phosphoribosyl-ATP pyrophosphat	1e-17
d1vmga_	83	a.204.1.2 (A:) Hypothetical protein SSo12199 (SSo3	3e-05

>d1zpsa1 b.168.1.1 (A:8-131) Phosphoribosyl-AMP cyclohydrolase HisI {Methanobacterium thermoautotrophicum [TaxId: 145262]} Length = 124

class: All beta proteins
fold: HisI-like
superfamily: HisI-like
family: HisI-like
domain: Phosphoribosyl-AMP cyclohydrolase HisI
species: Methanobacterium thermoautotrophicum [TaxId: 145262]

 Score =  110 bits (275), Expect = 6e-31
 Identities = 37/98 (37%), Positives = 63/98 (64%)

Query: 58  KWDNKGLAVAIAQNVDTGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNF 117
             + + L +A+AQ+ +TG +LM  + NR+AL  T+ +  A ++S SR  LW KGE+S + 
Sbjct: 10  NINGEDLIIAVAQDHETGEVLMVAYMNREALRRTLETGTAHYWSTSRGKLWLKGESSGHV 69

Query: 118 INVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSV 155
             V+D+ +DCD D+++   + +G  CHTG  +C+Y S+
Sbjct: 70  QRVKDVLVDCDGDAVVLKVEQEGGACHTGYRSCFYRSI 107

>d2a7wa1 a.204.1.4 (A:4-94) Phosphoribosyl-ATP pyrophosphatase HisE {Chromobacterium violaceum [TaxId: 536]} Length = 91

class: All alpha proteins
fold: all-alpha NTP pyrophosphatases
superfamily: all-alpha NTP pyrophosphatases
family: HisE-like (PRA-PH)
domain: Phosphoribosyl-ATP pyrophosphatase HisE
species: Chromobacterium violaceum [TaxId: 536]

 Score = 82.9 bits (205), Expect = 4e-21
 Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 4/92 (4%)

Query: 173 TLYSLESTISQRKAASKNGKPSWTKRLLLDSKLLC-SKIREEADELCRTLEENEDNSRTA 231
            L ++  T+  R+ A+     S+   L    +     K+ EEA E      +++D     
Sbjct: 2   VLKNIADTLEARREAAPQS--SYVASLFHKGEDAILKKVAEEAAETLMA-SKDKDKLHLV 58

Query: 232 SEMADVLYHAMVLLALKDVKAEEVLEVLRKRF 263
            E+AD+ +H MVLL    ++ E+V+  L +R 
Sbjct: 59  REVADLWFHTMVLLTYHGLRPEDVVMELHRRE 90

>d1yvwa1 a.204.1.4 (A:4-95) Phosphoribosyl-ATP pyrophosphatase HisE {Bacillus cereus [TaxId: 1396]} Length = 92

class: All alpha proteins
fold: all-alpha NTP pyrophosphatases
superfamily: all-alpha NTP pyrophosphatases
family: HisE-like (PRA-PH)
domain: Phosphoribosyl-ATP pyrophosphatase HisE
species: Bacillus cereus [TaxId: 1396]

 Score = 80.2 bits (198), Expect = 6e-20
 Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 4/91 (4%)

Query: 174 LYSLESTISQRKAASKNGKPSWTKRLLLDSK-LLCSKIREEADELCRTLEENEDNSRTAS 232
              L  TI +RK +      S+T  L    +  +  KI EE  E+     +N D      
Sbjct: 2   FKLLYKTIEERKGSPLPE--SYTNYLFSKGEDKILKKIGEECAEVIIA-CKNNDKEEVVK 58

Query: 233 EMADVLYHAMVLLALKDVKAEEVLEVLRKRF 263
           EM DV YH  VLLA K++  E+V+  +++R 
Sbjct: 59  EMVDVFYHCFVLLAEKNIALEDVMREVKERN 89

>d1y6xa1 a.204.1.4 (A:7-93) Phosphoribosyl-ATP pyrophosphatase HisE {Mycobacterium tuberculosis [TaxId: 1773]} Length = 87

class: All alpha proteins
fold: all-alpha NTP pyrophosphatases
superfamily: all-alpha NTP pyrophosphatases
family: HisE-like (PRA-PH)
domain: Phosphoribosyl-ATP pyrophosphatase HisE
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 79.0 bits (195), Expect = 1e-19
 Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 4/90 (4%)

Query: 171 MTTLYSLESTISQRKAASKNGKPSWTKRLLLDSKLLC-SKIREEADELCRTLEENEDNSR 229
           + T   L + +  R         S T   L         K+ EEA E+    E +E N  
Sbjct: 1   VKTFEDLFAELGDRARTRPAD--STTVAALDGGVHALGKKLLEEAGEVWLAAE-HESNDA 57

Query: 230 TASEMADVLYHAMVLLALKDVKAEEVLEVL 259
            A E++ +LY   VL+  + +  ++V   L
Sbjct: 58  LAEEISQLLYWTQVLMISRGLSLDDVYRKL 87

>d1yxba1 a.204.1.4 (A:4-91) Phosphoribosyl-ATP pyrophosphatase HisE {Streptomyces coelicolor [TaxId: 1902]} Length = 88

class: All alpha proteins
fold: all-alpha NTP pyrophosphatases
superfamily: all-alpha NTP pyrophosphatases
family: HisE-like (PRA-PH)
domain: Phosphoribosyl-ATP pyrophosphatase HisE
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 73.6 bits (181), Expect = 1e-17
 Identities = 21/88 (23%), Positives = 36/88 (40%), Gaps = 3/88 (3%)

Query: 173 TLYSLESTISQRKAASKNGKPSWTKRLLLDSKLLC-SKIREEADELCRTLEENEDNSRTA 231
           T   L + +  + A       S T  L+         K+ EEA E+    E  E     A
Sbjct: 2   TFEELFTELQHKAANGDPAT-SRTAELVDKGVHAIGKKVVEEAAEVWMAAE-YEGKDAAA 59

Query: 232 SEMADVLYHAMVLLALKDVKAEEVLEVL 259
            E++ +LYH  V++  + +  ++V   L
Sbjct: 60  EEISQLLYHVQVMMVARGISLDDVYAHL 87

>d1vmga_ a.204.1.2 (A:) Hypothetical protein SSo12199 (SSo3215) {Sulfolobus solfataricus [TaxId: 2287]} Length = 83

class: All alpha proteins
fold: all-alpha NTP pyrophosphatases
superfamily: all-alpha NTP pyrophosphatases
family: MazG-like
domain: Hypothetical protein SSo12199 (SSo3215)
species: Sulfolobus solfataricus [TaxId: 2287]

 Score = 39.4 bits (92), Expect = 3e-05
 Identities = 15/75 (20%), Positives = 28/75 (37%), Gaps = 5/75 (6%)

Query: 183 QRKAASKNGKPSWTKRLLLDSKLLCSKIREEADELCRTLEENEDNSRTASEMADVLYHAM 242
           Q K      +    +          + + EE  EL   L  + +      E+ADV+   +
Sbjct: 9   QSKMKEMYFEKDSQR----GIYATFTWLVEEVGELAEALL-SNNLDSIQEELADVIAWTV 63

Query: 243 VLLALKDVKAEEVLE 257
            +  L+ +  EE L+
Sbjct: 64  SIANLEGIDIEEALK 78

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	278
d1zpsa1	124	Phosphoribosyl-AMP cyclohydrolase HisI {Methanobac	100.0
d1yvwa1	92	Phosphoribosyl-ATP pyrophosphatase HisE {Bacillus	100.0
d2a7wa1	91	Phosphoribosyl-ATP pyrophosphatase HisE {Chromobac	99.98
d1y6xa1	87	Phosphoribosyl-ATP pyrophosphatase HisE {Mycobacte	99.96
d1yxba1	88	Phosphoribosyl-ATP pyrophosphatase HisE {Streptomy	99.96
d1vmga_	83	Hypothetical protein SSo12199 (SSo3215) {Sulfolobu	98.25
d2gtaa1	98	Hypothetical protein YpjD {Bacillus subtilis [TaxI	97.34
d2oiea1	102	XTP3-transactivated gene A protein homolog RS21-C6	97.18

>d1zpsa1 b.168.1.1 (A:8-131) Phosphoribosyl-AMP cyclohydrolase HisI {Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: All beta proteins
fold: HisI-like
superfamily: HisI-like
family: HisI-like
domain: Phosphoribosyl-AMP cyclohydrolase HisI
species: Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=100.00  E-value=1.3e-53  Score=350.49  Aligned_cols=104  Identities=37%  Similarity=0.750  Sum_probs=98.0

Q ss_pred             hhhcccc--CCCCeEEEEEEecCCCceEEEeecCHHHHHHHHhcCcEEEEeCCCCcceeccCCCCCeeEEEEEeccCCCC
Q 023745           53 LLDSVKW--DNKGLAVAIAQNVDTGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRD  130 (278)
Q Consensus        53 ~~~~i~~--d~~GLiPaivQd~~tg~VLmlaymN~eAl~~Tl~tg~~~y~SRSr~~lW~KGetSG~~q~v~~i~~DCD~D  130 (278)
                      ++.+++|  |.+|||||||||+.||+|||+||||+|||++||+||++|||||||++||+|||||||+|+|++|++|||+|
T Consensus         3 ~~~~~~~~~n~~gLiP~ivqd~~tg~VLMlaymN~eAl~~Tl~tg~~~y~SRSR~~lW~KGetSG~~q~v~~i~~DCD~D   82 (124)
T d1zpsa1           3 ILLNFRHNINGEDLIIAVAQDHETGEVLMVAYMNREALRRTLETGTAHYWSTSRGKLWLKGESSGHVQRVKDVLVDCDGD   82 (124)
T ss_dssp             GGSCCCCCSSSCCCEEEEEEETTTCCEEEEEEECHHHHHHHHHHSBCEEEETTTTEEEETTTTTSCCEEEEEEEECTTSS
T ss_pred             cccccccCCCCCCceeEEEEECCCCCEEEEEEcCHHHHHHHHhcCcEEEEEhhhhhhhhhhhhcCCeeEEEEEEcCCCCC
Confidence            3444555  56789999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cEEEEEeeCCCCCCCCCccccccccc
Q 023745          131 SIIYLGKPDGPTCHTGSETCYYTSVL  156 (278)
Q Consensus       131 ~ll~~v~~~g~aCHtg~~SCF~~~~~  156 (278)
                      |||++|+|.|||||||++||||+.+.
T Consensus        83 ~ll~~V~q~G~aCHtG~~SCFyr~~~  108 (124)
T d1zpsa1          83 AVVLKVEQEGGACHTGYRSCFYRSID  108 (124)
T ss_dssp             EEEEEEEESSCSSTTSBSSSCCEEEE
T ss_pred             EEEEEEecccceeecCCCCCcceEec
Confidence            99999999999999999999999874

>d1yvwa1 a.204.1.4 (A:4-95) Phosphoribosyl-ATP pyrophosphatase HisE {Bacillus cereus [TaxId: 1396]}

class: All alpha proteins
fold: all-alpha NTP pyrophosphatases
superfamily: all-alpha NTP pyrophosphatases
family: HisE-like (PRA-PH)
domain: Phosphoribosyl-ATP pyrophosphatase HisE
species: Bacillus cereus [TaxId: 1396]

Probab=100.00  E-value=2.2e-33  Score=220.31  Aligned_cols=89  Identities=33%  Similarity=0.466  Sum_probs=84.7

Q ss_pred             HHHHHHHHHHHHhcCCCCCCchhhhhhcCC-hhHHHHHhHhHHHHHHhhhccCCchhhHhhHHHHHHHHHHHHHhCCCCH
Q 023745          174 LYSLESTISQRKAASKNGKPSWTKRLLLDS-KLLCSKIREEADELCRTLEENEDNSRTASEMADVLYHAMVLLALKDVKA  252 (278)
Q Consensus       174 L~~L~~~I~~Rk~~~~e~~~SYT~~Ll~~g-~~i~kKIgEEA~E~iiAa~~~~d~~eli~EaADLlYHllVlL~~~gv~l  252 (278)
                      |..|+++|++|+.++|++  |||++||++| ++|++||||||+|+++|++ +++++++++|+||||||+||+|+++||++
T Consensus         2 le~L~~~I~~Rk~~~~~~--SYt~~L~~~G~~~i~~KigEEa~E~i~Aa~-~~~k~~~i~E~ADLlyHllVll~~~gi~~   78 (92)
T d1yvwa1           2 FKLLYKTIEERKGSPLPE--SYTNYLFSKGEDKILKKIGEECAEVIIACK-NNDKEEVVKEMVDVFYHCFVLLAEKNIAL   78 (92)
T ss_dssp             HHHHHHHHHHHHHSCCTT--SHHHHHHHHCHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHHHHTTCCH
T ss_pred             HHHHHHHHHHHHCCCCCC--cHHHHHHhCChHHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHHHHHCCCCH
Confidence            688999999999998865  9999999998 8999999999999999986 68999999999999999999999999999


Q ss_pred             HHHHHHHHhHhCC
Q 023745          253 EEVLEVLRKRFSH  265 (278)
Q Consensus       253 ~dV~~eL~~R~~~  265 (278)
                      +||++||.+||++
T Consensus        79 ~dV~~eL~~R~gk   91 (92)
T d1yvwa1          79 EDVMREVKERNGK   91 (92)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCC
Confidence            9999999999974

>d2a7wa1 a.204.1.4 (A:4-94) Phosphoribosyl-ATP pyrophosphatase HisE {Chromobacterium violaceum [TaxId: 536]}

class: All alpha proteins
fold: all-alpha NTP pyrophosphatases
superfamily: all-alpha NTP pyrophosphatases
family: HisE-like (PRA-PH)
domain: Phosphoribosyl-ATP pyrophosphatase HisE
species: Chromobacterium violaceum [TaxId: 536]

Probab=99.98  E-value=5.2e-33  Score=217.71  Aligned_cols=89  Identities=27%  Similarity=0.439  Sum_probs=85.0

Q ss_pred             HHHHHHHHHHHHHhcCCCCCCchhhhhhcCC-hhHHHHHhHhHHHHHHhhhccCCchhhHhhHHHHHHHHHHHHHhCCCC
Q 023745          173 TLYSLESTISQRKAASKNGKPSWTKRLLLDS-KLLCSKIREEADELCRTLEENEDNSRTASEMADVLYHAMVLLALKDVK  251 (278)
Q Consensus       173 ~L~~L~~~I~~Rk~~~~e~~~SYT~~Ll~~g-~~i~kKIgEEA~E~iiAa~~~~d~~eli~EaADLlYHllVlL~~~gv~  251 (278)
                      +|.+|+++|++|+.++|++  |||++||++| ++|+|||||||+|+++|++ ++|++++++|+||||||+||+|.++||+
T Consensus         2 iL~~L~~~i~~Rk~~~~~~--SYt~~L~~~G~~~i~kKigEEa~E~i~A~~-~~~~~~vi~EaADLlyHllVlL~~~gi~   78 (91)
T d2a7wa1           2 VLKNIADTLEARREAAPQS--SYVASLFHKGEDAILKKVAEEAAETLMASK-DKDKLHLVREVADLWFHTMVLLTYHGLR   78 (91)
T ss_dssp             CHHHHHHHHHHGGGSCTTT--CHHHHHHHHCHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHHHcCCCcc--cHHHHHHhCChHHHHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence            6899999999999999866  9999999988 8999999999999999986 6799999999999999999999999999


Q ss_pred             HHHHHHHHHhHhC
Q 023745          252 AEEVLEVLRKRFS  264 (278)
Q Consensus       252 l~dV~~eL~~R~~  264 (278)
                      ++||++||.+|||
T Consensus        79 ~~dV~~eL~~R~G   91 (91)
T d2a7wa1          79 PEDVVMELHRREG   91 (91)
T ss_dssp             HHHHHHHHHHHCC
T ss_pred             HHHHHHHHHhcCC
Confidence            9999999999996

>d1y6xa1 a.204.1.4 (A:7-93) Phosphoribosyl-ATP pyrophosphatase HisE {Mycobacterium tuberculosis [TaxId: 1773]}

class: All alpha proteins
fold: all-alpha NTP pyrophosphatases
superfamily: all-alpha NTP pyrophosphatases
family: HisE-like (PRA-PH)
domain: Phosphoribosyl-ATP pyrophosphatase HisE
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.96  E-value=3.4e-31  Score=205.88  Aligned_cols=84  Identities=27%  Similarity=0.328  Sum_probs=80.0

Q ss_pred             HHHHHHHHHHHHHhcCCCCCCchhhhhhcCC-hhHHHHHhHhHHHHHHhhhccCCchhhHhhHHHHHHHHHHHHHhCCCC
Q 023745          173 TLYSLESTISQRKAASKNGKPSWTKRLLLDS-KLLCSKIREEADELCRTLEENEDNSRTASEMADVLYHAMVLLALKDVK  251 (278)
Q Consensus       173 ~L~~L~~~I~~Rk~~~~e~~~SYT~~Ll~~g-~~i~kKIgEEA~E~iiAa~~~~d~~eli~EaADLlYHllVlL~~~gv~  251 (278)
                      +|++|+++|.+|+.++|++  |||++||++| ++|+|||||||+|+++|++ +++++++++|+||||||+||+|+++||+
T Consensus         3 tle~L~~~I~~R~~~~~~~--SYt~~L~~~G~~ki~~KigEEa~E~iiA~~-~~~~~~~i~EaADLlyHllVlL~~~~i~   79 (87)
T d1y6xa1           3 TFEDLFAELGDRARTRPAD--STTVAALDGGVHALGKKLLEEAGEVWLAAE-HESNDALAEEISQLLYWTQVLMISRGLS   79 (87)
T ss_dssp             SHHHHHHHHHHHHHHCCTT--CHHHHHHHTCHHHHHHHHHHHHHHHHHHHH-HSCHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred             cHHHHHHHHHHHhcCCCCC--cHHHHHHHCchHHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence            6899999999999999866  9999999998 8999999999999999986 6799999999999999999999999999


Q ss_pred             HHHHHHHH
Q 023745          252 AEEVLEVL  259 (278)
Q Consensus       252 l~dV~~eL  259 (278)
                      |+||++||
T Consensus        80 ~~dV~~eL   87 (87)
T d1y6xa1          80 LDDVYRKL   87 (87)
T ss_dssp             HHHHHTTC
T ss_pred             HHHHHhhC
Confidence            99999886

>d1yxba1 a.204.1.4 (A:4-91) Phosphoribosyl-ATP pyrophosphatase HisE {Streptomyces coelicolor [TaxId: 1902]}

class: All alpha proteins
fold: all-alpha NTP pyrophosphatases
superfamily: all-alpha NTP pyrophosphatases
family: HisE-like (PRA-PH)
domain: Phosphoribosyl-ATP pyrophosphatase HisE
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.96  E-value=8e-30  Score=198.47  Aligned_cols=84  Identities=25%  Similarity=0.373  Sum_probs=76.6

Q ss_pred             HHHHHHHHHHHHHhcC-CCCCCchhhhhhcCC-hhHHHHHhHhHHHHHHhhhccCCchhhHhhHHHHHHHHHHHHHhCCC
Q 023745          173 TLYSLESTISQRKAAS-KNGKPSWTKRLLLDS-KLLCSKIREEADELCRTLEENEDNSRTASEMADVLYHAMVLLALKDV  250 (278)
Q Consensus       173 ~L~~L~~~I~~Rk~~~-~e~~~SYT~~Ll~~g-~~i~kKIgEEA~E~iiAa~~~~d~~eli~EaADLlYHllVlL~~~gv  250 (278)
                      +|++|+++|.+|+.++ |+  +|||++||++| ++|++||||||+|+++|++ +++++++++|+||||||+||+|+++||
T Consensus         2 t~e~L~~~i~~r~~~~~p~--~SYt~~L~~~G~~~i~kKv~EEa~E~i~A~~-~~~~~~~i~EaADLlyHllVll~~~gi   78 (88)
T d1yxba1           2 TFEELFTELQHKAANGDPA--TSRTAELVDKGVHAIGKKVVEEAAEVWMAAE-YEGKDAAAEEISQLLYHVQVMMVARGI   78 (88)
T ss_dssp             CHHHHHHHHHHHTCC------CCSSCCHHHHCHHHHHHHHHHHHHHHHHHHH-HSCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             CHHHHHHHHHHHHhCCCCc--ccHHHHHHHCcHHHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            4889999999998764 54  59999999998 8999999999999999986 679999999999999999999999999


Q ss_pred             CHHHHHHHH
Q 023745          251 KAEEVLEVL  259 (278)
Q Consensus       251 ~l~dV~~eL  259 (278)
                      +|+||++||
T Consensus        79 ~~~dV~~eL   87 (88)
T d1yxba1          79 SLDDVYAHL   87 (88)
T ss_dssp             CHHHHHHHC
T ss_pred             CHHHHHHhH
Confidence            999999997

>d1vmga_ a.204.1.2 (A:) Hypothetical protein SSo12199 (SSo3215) {Sulfolobus solfataricus [TaxId: 2287]}

class: All alpha proteins
fold: all-alpha NTP pyrophosphatases
superfamily: all-alpha NTP pyrophosphatases
family: MazG-like
domain: Hypothetical protein SSo12199 (SSo3215)
species: Sulfolobus solfataricus [TaxId: 2287]

Probab=98.25  E-value=1.4e-06  Score=65.10  Aligned_cols=53  Identities=25%  Similarity=0.326  Sum_probs=48.2

Q ss_pred             hhHHHHHhHhHHHHHHhhhccCCchhhHhhHHHHHHHHHHHHHhCCCCHHHHHH
Q 023745          204 KLLCSKIREEADELCRTLEENEDNSRTASEMADVLYHAMVLLALKDVKAEEVLE  257 (278)
Q Consensus       204 ~~i~kKIgEEA~E~iiAa~~~~d~~eli~EaADLlYHllVlL~~~gv~l~dV~~  257 (278)
                      ...+.|+.||+.|+..|.. .++++++..|.||++|+++.+....||+++++++
T Consensus        26 ~~~~~~l~eE~gEl~~a~~-~~~~~~i~~ElgDvl~~l~~la~~~~iDle~al~   78 (83)
T d1vmga_          26 YATFTWLVEEVGELAEALL-SNNLDSIQEELADVIAWTVSIANLEGIDIEEALK   78 (83)
T ss_dssp             HHHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHhhHHHHHHHHHHHhCcCHHHHHH
Confidence            5567899999999999876 4689999999999999999999999999999875

>d2gtaa1 a.204.1.2 (A:1-98) Hypothetical protein YpjD {Bacillus subtilis [TaxId: 1423]}

class: All alpha proteins
fold: all-alpha NTP pyrophosphatases
superfamily: all-alpha NTP pyrophosphatases
family: MazG-like
domain: Hypothetical protein YpjD
species: Bacillus subtilis [TaxId: 1423]

Probab=97.34  E-value=0.00033  Score=53.00  Aligned_cols=58  Identities=26%  Similarity=0.439  Sum_probs=47.3

Q ss_pred             hHHHHHhHhHHHHHHhhhc---------cCCchhhHhhHHHHHHHHHHHHHhCCCCHHHHHHHHHhH
Q 023745          205 LLCSKIREEADELCRTLEE---------NEDNSRTASEMADVLYHAMVLLALKDVKAEEVLEVLRKR  262 (278)
Q Consensus       205 ~i~kKIgEEA~E~iiAa~~---------~~d~~eli~EaADLlYHllVlL~~~gv~l~dV~~eL~~R  262 (278)
                      ..+-++.||+.|++.+...         .++++++..|.||+++.++.+....||++++++..=...
T Consensus        29 ~~l~~l~~E~GElae~~~~~~~~~~~~~~~~~~~l~~ElaDVl~yl~~LA~~l~iDL~~a~~~k~~K   95 (98)
T d2gtaa1          29 AMMARLTEELGELAREVNHRYGEKPKKATEDDKSMEEEIGDVLFVLVCLANSLDISLEEAHDRVMHK   95 (98)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTSSSCCCSSCSCSHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCccCCCCcccHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHHHHHh
Confidence            3445799999999876532         245788999999999999999999999999988764443

>d2oiea1 a.204.1.2 (A:21-122) XTP3-transactivated gene A protein homolog RS21-C6 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: all-alpha NTP pyrophosphatases
superfamily: all-alpha NTP pyrophosphatases
family: MazG-like
domain: XTP3-transactivated gene A protein homolog RS21-C6
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.18  E-value=0.0004  Score=53.22  Aligned_cols=78  Identities=19%  Similarity=0.238  Sum_probs=56.4

Q ss_pred             HHHHHHHHHHHHHhcCCCCCCchhhhhhcCChhHHHHHhHhHHHHHHhhhcc------------CCchhhHhhHHHHHHH
Q 023745          173 TLYSLESTISQRKAASKNGKPSWTKRLLLDSKLLCSKIREEADELCRTLEEN------------EDNSRTASEMADVLYH  240 (278)
Q Consensus       173 ~L~~L~~~I~~Rk~~~~e~~~SYT~~Ll~~g~~i~kKIgEEA~E~iiAa~~~------------~d~~eli~EaADLlYH  240 (278)
                      .|.+|.+.|.+=..+..     |  .=|+.+..++-.+.+||.|++.+....            ++++++..|.||+|++
T Consensus        10 tl~~lq~~v~~f~~~R~-----W--~qfh~Pknla~~L~~EaGEL~e~~qw~~~~~~~~~~~~~~~~~~l~~ELaDVl~y   82 (102)
T d2oiea1          10 TLEDIRRLHAEFAAERD-----W--EQFHQPRNLLLALVGEVGELAELFQWKSDTEPGPQAWPPKERAALQEELSDVLIY   82 (102)
T ss_dssp             CHHHHHHHHHHHHHTTT-----C--GGGCCHHHHHHHHHHHHHHHHHHHHTCCCCSSCGGGSCHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHcC-----C--cccCCHHHHHHHHHHHHHHHHHHHHhhcccchhhcccchHHHHHHHHHHHHHHHH
Confidence            47778777765333321     1  113344456789999999999765321            1256799999999999


Q ss_pred             HHHHHHhCCCCHHHHHH
Q 023745          241 AMVLLALKDVKAEEVLE  257 (278)
Q Consensus       241 llVlL~~~gv~l~dV~~  257 (278)
                      ++.+....||++++++.
T Consensus        83 l~~lA~~l~IDL~~a~~   99 (102)
T d2oiea1          83 LVALAARCHVDLPQAVI   99 (102)
T ss_dssp             HHHHHHHTTCCHHHHHH
T ss_pred             HHHHHHHHCcCHHHHHH
Confidence            99999999999999875