Query 023747
Match_columns 278
No_of_seqs 166 out of 2354
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 12:06:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023747.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023747hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3uem_A Protein disulfide-isome 100.0 4.8E-36 1.7E-40 265.5 27.4 244 5-257 107-358 (361)
2 3idv_A Protein disulfide-isome 100.0 1.1E-33 3.9E-38 236.2 20.2 218 17-258 15-239 (241)
3 3f8u_A Protein disulfide-isome 100.0 4.1E-30 1.4E-34 235.7 27.7 233 38-278 234-481 (481)
4 2b5e_A Protein disulfide-isome 100.0 1.3E-30 4.5E-35 240.4 23.2 224 32-260 233-471 (504)
5 3apo_A DNAJ homolog subfamily 100.0 3.9E-30 1.3E-34 248.7 20.4 225 5-257 533-768 (780)
6 1a8l_A Protein disulfide oxido 100.0 4.6E-30 1.6E-34 212.5 17.3 195 37-255 22-225 (226)
7 3apo_A DNAJ homolog subfamily 100.0 3.7E-29 1.3E-33 241.9 23.8 209 19-258 442-658 (780)
8 2ywm_A Glutaredoxin-like prote 100.0 7.5E-29 2.6E-33 205.8 16.9 193 36-257 19-221 (229)
9 2hls_A Protein disulfide oxido 99.9 1.7E-25 5.8E-30 187.2 20.6 194 37-260 25-230 (243)
10 3us3_A Calsequestrin-1; calciu 99.9 2.1E-23 7.3E-28 184.7 18.7 206 18-259 14-230 (367)
11 2r2j_A Thioredoxin domain-cont 99.9 7.7E-23 2.6E-27 182.1 20.9 209 16-259 4-221 (382)
12 1sji_A Calsequestrin 2, calseq 99.9 2.3E-23 7.7E-28 183.5 15.0 203 19-258 13-227 (350)
13 3ed3_A Protein disulfide-isome 99.9 1.2E-22 4.2E-27 174.8 17.7 216 14-259 14-270 (298)
14 3f8u_A Protein disulfide-isome 99.9 1.5E-21 5.1E-26 178.8 16.0 209 19-259 3-220 (481)
15 3h79_A Thioredoxin-like protei 99.9 9.1E-21 3.1E-25 142.5 12.9 109 146-254 13-126 (127)
16 3q6o_A Sulfhydryl oxidase 1; p 99.8 5.2E-19 1.8E-23 147.8 18.8 220 16-257 11-241 (244)
17 2b5e_A Protein disulfide-isome 99.8 4.5E-19 1.5E-23 163.3 20.1 203 17-260 14-224 (504)
18 3uem_A Protein disulfide-isome 99.8 3.6E-19 1.2E-23 157.1 17.7 195 30-257 28-231 (361)
19 2djj_A PDI, protein disulfide- 99.8 1.3E-19 4.4E-24 134.7 12.5 111 146-257 5-118 (121)
20 3zzx_A Thioredoxin; oxidoreduc 99.8 1.1E-19 3.6E-24 132.2 10.7 98 151-254 3-104 (105)
21 3ga4_A Dolichyl-diphosphooligo 99.8 3.7E-19 1.3E-23 140.3 13.1 121 147-269 17-166 (178)
22 2dj3_A Protein disulfide-isome 99.8 4.4E-19 1.5E-23 134.1 12.1 113 146-258 5-120 (133)
23 3gnj_A Thioredoxin domain prot 99.8 3.7E-19 1.3E-23 130.1 10.8 105 148-256 4-110 (111)
24 2qsi_A Putative hydrogenase ex 99.8 1.5E-19 5.3E-24 136.0 8.6 105 148-256 15-123 (137)
25 2trx_A Thioredoxin; electron t 99.8 9.5E-19 3.3E-23 127.3 12.5 105 148-256 2-108 (108)
26 2djk_A PDI, protein disulfide- 99.8 2.5E-19 8.4E-24 135.9 9.2 118 20-145 9-130 (133)
27 2voc_A Thioredoxin; electron t 99.8 1.1E-18 3.7E-23 128.1 11.2 106 150-261 3-110 (112)
28 2o8v_B Thioredoxin 1; disulfid 99.8 2.5E-18 8.4E-23 129.5 13.3 104 149-256 23-128 (128)
29 2av4_A Thioredoxin-like protei 99.8 1.6E-18 5.3E-23 132.6 11.7 106 150-257 23-140 (160)
30 1w4v_A Thioredoxin, mitochondr 99.8 1E-18 3.4E-23 129.8 10.3 110 143-256 8-119 (119)
31 3t58_A Sulfhydryl oxidase 1; o 99.8 6.9E-18 2.3E-22 155.1 17.6 221 16-257 11-241 (519)
32 2dml_A Protein disulfide-isome 99.8 1.7E-18 6E-23 130.3 10.9 110 146-258 15-126 (130)
33 4f9z_D Endoplasmic reticulum r 99.8 1.4E-17 4.8E-22 137.7 17.1 192 33-256 23-225 (227)
34 2i4a_A Thioredoxin; acidophIle 99.8 3.2E-18 1.1E-22 124.1 11.6 102 149-254 3-106 (107)
35 1x5d_A Protein disulfide-isome 99.8 1.6E-18 5.4E-23 130.9 10.3 109 146-258 5-119 (133)
36 1t00_A Thioredoxin, TRX; redox 99.8 3.5E-18 1.2E-22 125.2 11.5 104 149-256 6-111 (112)
37 3uvt_A Thioredoxin domain-cont 99.8 2.8E-18 9.5E-23 125.2 10.6 103 148-254 5-110 (111)
38 2dj1_A Protein disulfide-isome 99.8 2.6E-18 8.8E-23 131.0 10.7 112 146-261 15-129 (140)
39 3hz4_A Thioredoxin; NYSGXRC, P 99.8 2E-18 6.8E-23 132.0 9.8 107 147-257 5-113 (140)
40 1thx_A Thioredoxin, thioredoxi 99.8 5.2E-18 1.8E-22 124.6 11.6 105 148-256 7-113 (115)
41 2ppt_A Thioredoxin-2; thiredox 99.8 3.9E-18 1.3E-22 132.7 11.1 106 147-257 46-153 (155)
42 1dby_A Chloroplast thioredoxin 99.8 4.2E-18 1.4E-22 123.6 10.4 102 150-255 3-106 (107)
43 3tco_A Thioredoxin (TRXA-1); d 99.8 5.9E-18 2E-22 123.0 11.2 103 148-255 4-108 (109)
44 3aps_A DNAJ homolog subfamily 99.8 3.2E-18 1.1E-22 127.3 9.9 108 148-259 3-116 (122)
45 2qgv_A Hydrogenase-1 operon pr 99.8 3.5E-19 1.2E-23 134.5 4.5 105 149-258 18-127 (140)
46 3p2a_A Thioredoxin 2, putative 99.8 6.4E-18 2.2E-22 130.3 11.7 107 147-258 37-145 (148)
47 3evi_A Phosducin-like protein 99.8 5.8E-18 2E-22 125.4 10.9 101 148-254 3-112 (118)
48 3die_A Thioredoxin, TRX; elect 99.8 4.5E-18 1.5E-22 123.1 10.0 101 149-255 4-106 (106)
49 1mek_A Protein disulfide isome 99.8 3.3E-18 1.1E-22 126.5 9.1 111 147-258 6-119 (120)
50 1fb6_A Thioredoxin M; electron 99.7 8E-18 2.7E-22 121.5 10.7 102 150-255 2-105 (105)
51 2l5l_A Thioredoxin; structural 99.7 1.8E-17 6.3E-22 125.9 13.0 110 146-260 7-130 (136)
52 3hxs_A Thioredoxin, TRXP; elec 99.7 7.6E-18 2.6E-22 128.6 10.5 107 146-256 20-139 (141)
53 2i1u_A Thioredoxin, TRX, MPT46 99.7 4.6E-18 1.6E-22 126.2 9.0 107 146-256 10-118 (121)
54 3dxb_A Thioredoxin N-terminall 99.7 2.3E-17 7.9E-22 135.9 13.9 111 146-260 10-122 (222)
55 3qfa_C Thioredoxin; protein-pr 99.7 4.3E-18 1.5E-22 125.8 8.5 103 147-255 11-116 (116)
56 1nsw_A Thioredoxin, TRX; therm 99.7 9.6E-18 3.3E-22 121.2 9.9 101 150-255 2-104 (105)
57 2yzu_A Thioredoxin; redox prot 99.7 1.1E-17 3.8E-22 121.4 10.0 104 149-257 2-107 (109)
58 1oaz_A Thioredoxin 1; immune s 99.7 3.4E-18 1.2E-22 127.8 7.4 104 149-256 4-123 (123)
59 1gh2_A Thioredoxin-like protei 99.7 2.5E-17 8.4E-22 119.7 11.5 101 150-256 3-107 (107)
60 2pu9_C TRX-F, thioredoxin F-ty 99.7 2.6E-17 9E-22 120.3 11.6 104 146-255 3-110 (111)
61 4euy_A Uncharacterized protein 99.7 7.4E-18 2.5E-22 122.1 8.1 96 154-255 7-104 (105)
62 2e0q_A Thioredoxin; electron t 99.7 2.2E-17 7.5E-22 118.7 10.4 101 150-256 1-103 (104)
63 3ed3_A Protein disulfide-isome 99.7 1.5E-17 5.1E-22 143.0 11.1 113 146-260 15-146 (298)
64 1x5e_A Thioredoxin domain cont 99.7 3.1E-17 1.1E-21 122.8 10.6 106 146-258 5-112 (126)
65 1xwb_A Thioredoxin; dimerizati 99.7 4.3E-17 1.5E-21 117.8 10.8 101 150-255 2-106 (106)
66 1v98_A Thioredoxin; oxidoreduc 99.7 3.3E-17 1.1E-21 125.0 10.1 105 148-257 33-139 (140)
67 1r26_A Thioredoxin; redox-acti 99.7 4.1E-17 1.4E-21 122.2 10.3 100 150-256 21-123 (125)
68 1ep7_A Thioredoxin CH1, H-type 99.7 4.4E-17 1.5E-21 119.2 10.1 103 149-256 3-111 (112)
69 2dbc_A PDCL2, unnamed protein 99.7 1.2E-16 4.3E-21 121.2 12.7 106 147-258 9-123 (135)
70 2vlu_A Thioredoxin, thioredoxi 99.7 6.7E-17 2.3E-21 120.1 10.8 105 147-257 12-121 (122)
71 3apq_A DNAJ homolog subfamily 99.7 5.6E-17 1.9E-21 132.4 11.3 109 146-259 95-205 (210)
72 3qou_A Protein YBBN; thioredox 99.7 4.1E-17 1.4E-21 139.3 11.0 106 147-256 6-114 (287)
73 3d6i_A Monothiol glutaredoxin- 99.7 5.3E-17 1.8E-21 118.8 9.9 103 150-256 2-109 (112)
74 3f3q_A Thioredoxin-1; His TAG, 99.7 6.3E-17 2.2E-21 118.1 9.9 100 149-255 8-109 (109)
75 2r2j_A Thioredoxin domain-cont 99.7 3.7E-17 1.3E-21 145.4 9.7 110 148-259 5-120 (382)
76 2vim_A Thioredoxin, TRX; thior 99.7 1.4E-16 4.9E-21 114.6 10.5 99 151-255 2-104 (104)
77 1faa_A Thioredoxin F; electron 99.7 1.8E-16 6.2E-21 118.2 11.3 103 147-255 17-123 (124)
78 2xc2_A Thioredoxinn; oxidoredu 99.7 1E-16 3.5E-21 118.4 9.6 100 149-255 14-117 (117)
79 3gix_A Thioredoxin-like protei 99.7 9.7E-17 3.3E-21 123.9 9.9 100 153-256 9-121 (149)
80 1syr_A Thioredoxin; SGPP, stru 99.7 1.1E-16 3.8E-21 117.3 9.1 102 147-255 8-111 (112)
81 1xfl_A Thioredoxin H1; AT3G510 99.7 2.7E-16 9.3E-21 117.5 11.1 104 146-255 14-123 (124)
82 3idv_A Protein disulfide-isome 99.7 2.1E-16 7.2E-21 131.2 11.4 109 146-258 13-124 (241)
83 3m9j_A Thioredoxin; oxidoreduc 99.7 3E-16 1E-20 113.2 10.4 96 154-255 7-105 (105)
84 3h79_A Thioredoxin-like protei 99.7 3.4E-16 1.2E-20 117.3 11.0 105 17-128 15-126 (127)
85 3ul3_B Thioredoxin, thioredoxi 99.7 7.4E-17 2.5E-21 121.2 6.8 94 156-253 32-127 (128)
86 1qgv_A Spliceosomal protein U5 99.7 7.5E-16 2.6E-20 118.0 12.5 102 154-257 10-122 (142)
87 2dj0_A Thioredoxin-related tra 99.7 3.9E-18 1.3E-22 129.8 -0.6 106 147-255 6-120 (137)
88 1sji_A Calsequestrin 2, calseq 99.7 9.5E-15 3.3E-19 128.3 20.7 193 36-257 141-347 (350)
89 3q6o_A Sulfhydryl oxidase 1; p 99.7 7E-16 2.4E-20 128.7 12.6 113 146-259 10-130 (244)
90 1a0r_P Phosducin, MEKA, PP33; 99.7 1E-16 3.5E-21 133.3 7.4 128 123-256 88-226 (245)
91 2trc_P Phosducin, MEKA, PP33; 99.7 6.1E-17 2.1E-21 132.7 5.8 126 122-254 74-211 (217)
92 2wz9_A Glutaredoxin-3; protein 99.7 6.5E-16 2.2E-20 119.7 11.4 107 147-259 11-121 (153)
93 2oe3_A Thioredoxin-3; electron 99.7 1.8E-16 6.3E-21 116.7 7.6 101 147-253 11-113 (114)
94 2j23_A Thioredoxin; immune pro 99.7 2.4E-16 8.3E-21 117.2 8.2 105 146-255 13-120 (121)
95 1ti3_A Thioredoxin H, PTTRXH1; 99.7 4.3E-16 1.5E-20 113.9 9.1 103 148-256 4-112 (113)
96 2l57_A Uncharacterized protein 99.7 2.6E-16 8.9E-21 117.7 8.1 95 164-262 24-123 (126)
97 2l6c_A Thioredoxin; oxidoreduc 99.7 1.7E-16 5.7E-21 116.1 6.8 102 150-258 5-108 (110)
98 2c0g_A ERP29 homolog, windbeut 99.6 6.4E-16 2.2E-20 128.6 10.8 106 147-258 15-134 (248)
99 2vm1_A Thioredoxin, thioredoxi 99.6 7.1E-16 2.4E-20 113.6 10.0 104 148-257 6-115 (118)
100 3d22_A TRXH4, thioredoxin H-ty 99.6 1E-15 3.5E-20 116.4 11.0 106 147-258 23-134 (139)
101 3ga4_A Dolichyl-diphosphooligo 99.6 1.5E-15 5E-20 119.7 11.2 116 8-131 11-154 (178)
102 3emx_A Thioredoxin; structural 99.6 1.3E-16 4.3E-21 121.1 4.8 104 147-259 15-129 (135)
103 2yj7_A LPBCA thioredoxin; oxid 99.4 1.8E-17 6.1E-22 119.6 0.0 102 150-255 3-106 (106)
104 2es7_A Q8ZP25_salty, putative 99.6 1.4E-16 4.9E-21 121.9 5.0 105 149-259 18-128 (142)
105 2f51_A Thioredoxin; electron t 99.6 7.7E-16 2.6E-20 114.0 8.9 104 149-258 4-115 (118)
106 2qc7_A ERP31, ERP28, endoplasm 99.6 3.5E-15 1.2E-19 123.7 11.8 102 148-255 5-118 (240)
107 3cxg_A Putative thioredoxin; m 99.6 1.2E-15 4.2E-20 115.4 7.9 107 146-257 18-130 (133)
108 1zma_A Bacterocin transport ac 99.6 3.2E-16 1.1E-20 115.9 4.1 97 149-252 13-117 (118)
109 3us3_A Calsequestrin-1; calciu 99.6 6.4E-14 2.2E-18 123.8 19.3 193 36-256 143-348 (367)
110 3zzx_A Thioredoxin; oxidoreduc 99.6 8.9E-15 3E-19 106.0 10.9 85 36-128 19-104 (105)
111 2dml_A Protein disulfide-isome 99.6 1.1E-14 3.7E-19 109.3 10.2 106 18-130 18-124 (130)
112 2kuc_A Putative disulphide-iso 99.6 4.1E-15 1.4E-19 111.6 7.6 107 151-261 9-126 (130)
113 3t58_A Sulfhydryl oxidase 1; o 99.6 1.7E-14 5.6E-19 132.6 13.0 114 146-259 10-130 (519)
114 3die_A Thioredoxin, TRX; elect 99.6 1.8E-14 6.2E-19 103.8 10.0 101 18-128 4-105 (106)
115 2c0g_A ERP29 homolog, windbeut 99.6 1.9E-14 6.6E-19 119.7 11.3 142 19-196 18-174 (248)
116 3hxs_A Thioredoxin, TRXP; elec 99.6 1.3E-14 4.3E-19 110.6 9.1 107 18-130 23-139 (141)
117 3qcp_A QSOX from trypanosoma b 99.6 8.1E-16 2.8E-20 138.3 2.7 100 146-245 21-129 (470)
118 2trx_A Thioredoxin; electron t 99.6 2.6E-14 8.9E-19 103.5 10.0 103 19-129 4-107 (108)
119 2qsi_A Putative hydrogenase ex 99.5 1.2E-14 4E-19 109.3 8.1 102 20-129 18-122 (137)
120 2voc_A Thioredoxin; electron t 99.5 1.8E-14 6E-19 105.4 8.9 102 19-130 3-105 (112)
121 2av4_A Thioredoxin-like protei 99.5 3.1E-14 1.1E-18 108.9 9.3 93 35-131 39-140 (160)
122 3uvt_A Thioredoxin domain-cont 99.5 4.3E-14 1.5E-18 102.7 9.7 105 14-128 2-110 (111)
123 2i4a_A Thioredoxin; acidophIle 99.5 4.4E-14 1.5E-18 102.0 9.6 103 18-128 3-106 (107)
124 1thx_A Thioredoxin, thioredoxi 99.5 4.7E-14 1.6E-18 103.2 9.8 104 19-130 9-113 (115)
125 2dj1_A Protein disulfide-isome 99.5 5.4E-14 1.9E-18 106.8 10.5 106 18-133 18-127 (140)
126 1x5d_A Protein disulfide-isome 99.5 2.3E-14 7.9E-19 107.8 8.3 107 18-132 8-119 (133)
127 2djk_A PDI, protein disulfide- 99.5 5.6E-14 1.9E-18 106.2 10.3 101 149-256 7-115 (133)
128 3p2a_A Thioredoxin 2, putative 99.5 7.5E-14 2.6E-18 107.3 10.9 104 19-131 40-144 (148)
129 3tco_A Thioredoxin (TRXA-1); d 99.5 5E-14 1.7E-18 101.9 9.4 102 19-129 6-108 (109)
130 2qgv_A Hydrogenase-1 operon pr 99.5 6.4E-15 2.2E-19 111.2 4.7 102 20-130 20-125 (140)
131 1wmj_A Thioredoxin H-type; str 99.5 1.2E-15 4.1E-20 114.4 0.7 107 147-259 13-125 (130)
132 4euy_A Uncharacterized protein 99.5 2.9E-14 9.8E-19 103.0 7.9 91 32-129 13-104 (105)
133 3fk8_A Disulphide isomerase; A 99.5 2.5E-14 8.5E-19 107.8 7.9 96 156-255 16-132 (133)
134 2l5l_A Thioredoxin; structural 99.5 4.3E-14 1.5E-18 107.1 9.0 107 18-131 10-127 (136)
135 2ppt_A Thioredoxin-2; thiredox 99.5 3.3E-14 1.1E-18 110.4 8.5 102 20-130 50-152 (155)
136 3gnj_A Thioredoxin domain prot 99.5 1.2E-13 4.1E-18 100.4 10.9 103 19-129 6-109 (111)
137 1fo5_A Thioredoxin; disulfide 99.5 6.3E-14 2.1E-18 96.9 8.9 81 167-255 3-85 (85)
138 2o8v_B Thioredoxin 1; disulfid 99.5 3.7E-14 1.3E-18 106.5 7.8 103 19-129 24-127 (128)
139 2dj3_A Protein disulfide-isome 99.5 7E-14 2.4E-18 105.2 9.4 107 18-131 8-119 (133)
140 3dml_A Putative uncharacterize 99.5 5.1E-14 1.7E-18 103.0 8.1 87 166-257 18-111 (116)
141 1nsw_A Thioredoxin, TRX; therm 99.5 5.2E-14 1.8E-18 101.4 8.1 102 19-129 2-104 (105)
142 3hz4_A Thioredoxin; NYSGXRC, P 99.5 4.9E-14 1.7E-18 107.4 8.2 109 18-134 7-116 (140)
143 2e0q_A Thioredoxin; electron t 99.5 1E-13 3.6E-18 99.2 9.3 101 20-130 2-103 (104)
144 1w4v_A Thioredoxin, mitochondr 99.5 7.5E-14 2.6E-18 103.2 8.7 106 16-129 12-118 (119)
145 1nho_A Probable thioredoxin; b 99.5 5.1E-14 1.7E-18 97.3 7.2 80 168-255 3-84 (85)
146 3aps_A DNAJ homolog subfamily 99.5 3.6E-14 1.2E-18 105.2 6.7 104 19-130 5-113 (122)
147 1wou_A Thioredoxin -related pr 99.5 4.6E-14 1.6E-18 105.1 7.2 99 150-253 7-122 (123)
148 1v98_A Thioredoxin; oxidoreduc 99.5 2.5E-13 8.7E-18 103.3 11.5 105 18-131 34-139 (140)
149 2fwh_A Thiol:disulfide interch 99.5 3.3E-14 1.1E-18 107.5 6.5 104 150-256 13-128 (134)
150 1t00_A Thioredoxin, TRX; redox 99.5 1.3E-13 4.3E-18 100.5 9.4 104 19-130 7-111 (112)
151 1x5e_A Thioredoxin domain cont 99.5 1.3E-13 4.5E-18 102.8 9.5 105 18-134 8-114 (126)
152 2djj_A PDI, protein disulfide- 99.5 1.9E-13 6.6E-18 101.0 10.3 103 18-130 8-117 (121)
153 1dby_A Chloroplast thioredoxin 99.5 1E-13 3.5E-18 100.1 8.5 102 20-129 4-106 (107)
154 3qfa_C Thioredoxin; protein-pr 99.5 8.5E-14 2.9E-18 102.5 8.1 92 29-128 21-115 (116)
155 2yzu_A Thioredoxin; redox prot 99.5 1.1E-13 3.9E-18 99.9 8.6 103 19-130 3-106 (109)
156 3f9u_A Putative exported cytoc 99.5 1.3E-13 4.3E-18 108.7 9.1 101 152-256 30-166 (172)
157 1fb6_A Thioredoxin M; electron 99.5 2.4E-13 8.3E-18 97.7 9.5 101 20-128 3-104 (105)
158 3iv4_A Putative oxidoreductase 99.5 8.5E-14 2.9E-18 100.6 6.9 97 149-251 7-111 (112)
159 2h8l_A Protein disulfide-isome 99.5 2.6E-12 8.9E-17 107.6 16.9 192 32-256 19-230 (252)
160 2l57_A Uncharacterized protein 99.5 6.1E-13 2.1E-17 99.1 11.4 95 32-131 21-118 (126)
161 2wz9_A Glutaredoxin-3; protein 99.5 5.3E-13 1.8E-17 103.2 11.2 109 37-163 32-141 (153)
162 3ul3_B Thioredoxin, thioredoxi 99.5 2.8E-13 9.4E-18 101.5 9.2 92 30-127 35-127 (128)
163 3apq_A DNAJ homolog subfamily 99.5 3.1E-13 1E-17 110.1 10.1 105 19-132 99-204 (210)
164 2i1u_A Thioredoxin, TRX, MPT46 99.4 2E-13 6.9E-18 100.8 7.9 104 18-129 13-117 (121)
165 3m9j_A Thioredoxin; oxidoreduc 99.4 2.5E-13 8.7E-18 97.6 8.1 85 36-128 19-104 (105)
166 3f3q_A Thioredoxin-1; His TAG, 99.4 3E-13 1E-17 98.4 8.5 94 27-128 14-108 (109)
167 3bj5_A Protein disulfide-isome 99.4 6.2E-13 2.1E-17 102.1 10.4 112 31-145 25-142 (147)
168 1r26_A Thioredoxin; redox-acti 99.4 2.6E-13 9.1E-18 101.3 8.1 101 19-130 21-123 (125)
169 1mek_A Protein disulfide isome 99.4 1.3E-13 4.4E-18 101.4 6.2 105 18-130 8-117 (120)
170 1oaz_A Thioredoxin 1; immune s 99.4 3.7E-14 1.3E-18 105.7 3.2 103 19-129 5-122 (123)
171 3dxb_A Thioredoxin N-terminall 99.4 5.1E-13 1.7E-17 109.8 9.8 107 18-132 13-120 (222)
172 1ep7_A Thioredoxin CH1, H-type 99.4 1E-12 3.5E-17 95.6 10.3 87 37-130 24-111 (112)
173 1gh2_A Thioredoxin-like protei 99.4 6.2E-13 2.1E-17 96.1 9.1 87 35-129 19-106 (107)
174 3qou_A Protein YBBN; thioredox 99.4 3.1E-13 1.1E-17 115.2 8.2 105 18-129 8-113 (287)
175 3d6i_A Monothiol glutaredoxin- 99.4 6.6E-13 2.3E-17 96.7 8.3 88 36-130 20-109 (112)
176 3gix_A Thioredoxin-like protei 99.4 8.4E-13 2.9E-17 101.7 9.3 92 35-131 21-122 (149)
177 2qc7_A ERP31, ERP28, endoplasm 99.4 8.6E-13 2.9E-17 109.3 9.7 103 19-129 7-118 (240)
178 2pu9_C TRX-F, thioredoxin F-ty 99.4 1.1E-12 3.8E-17 95.4 9.3 103 18-129 6-110 (111)
179 2vlu_A Thioredoxin, thioredoxi 99.4 2.2E-12 7.5E-17 95.4 10.9 87 36-130 33-120 (122)
180 1xwb_A Thioredoxin; dimerizati 99.4 2.9E-12 1E-16 92.0 11.0 86 36-128 19-105 (106)
181 2lst_A Thioredoxin; structural 99.1 3E-14 1E-18 106.9 0.0 91 164-258 17-118 (130)
182 2j23_A Thioredoxin; immune pro 99.4 7.6E-13 2.6E-17 98.1 7.7 88 35-129 31-120 (121)
183 1qgv_A Spliceosomal protein U5 99.4 1.7E-12 5.8E-17 99.1 9.4 91 36-131 22-122 (142)
184 2es7_A Q8ZP25_salty, putative 99.4 7.6E-13 2.6E-17 101.0 7.3 103 19-131 19-126 (142)
185 1xfl_A Thioredoxin H1; AT3G510 99.4 1.3E-12 4.4E-17 97.3 7.7 86 36-129 37-123 (124)
186 2oe3_A Thioredoxin-3; electron 99.4 7.9E-13 2.7E-17 97.0 6.2 91 29-127 22-113 (114)
187 2ju5_A Thioredoxin disulfide i 99.4 2.2E-12 7.4E-17 99.9 9.0 97 156-257 34-153 (154)
188 1syr_A Thioredoxin; SGPP, stru 99.4 1.1E-12 3.8E-17 95.7 6.9 98 21-129 13-111 (112)
189 1faa_A Thioredoxin F; electron 99.3 3.6E-12 1.2E-16 94.6 9.2 103 18-129 19-123 (124)
190 2l6c_A Thioredoxin; oxidoreduc 99.3 1.6E-12 5.6E-17 94.6 7.1 90 34-130 16-106 (110)
191 2ywm_A Glutaredoxin-like prote 99.3 2.4E-12 8.4E-17 106.0 9.0 100 156-257 9-116 (229)
192 1sen_A Thioredoxin-like protei 99.3 7.7E-13 2.6E-17 103.6 5.0 97 156-257 37-149 (164)
193 1hyu_A AHPF, alkyl hydroperoxi 99.3 2.1E-11 7.2E-16 112.5 15.4 177 38-254 19-198 (521)
194 3ec3_A Protein disulfide-isome 99.3 1.5E-10 5.2E-15 96.7 19.3 188 34-256 21-228 (250)
195 2vim_A Thioredoxin, TRX; thior 99.3 1.1E-11 3.6E-16 88.8 10.5 85 36-128 18-103 (104)
196 2xc2_A Thioredoxinn; oxidoredu 99.3 8.6E-12 3E-16 91.6 9.8 84 36-128 32-116 (117)
197 3fk8_A Disulphide isomerase; A 99.3 7.2E-12 2.5E-16 94.2 9.5 90 35-129 27-132 (133)
198 2yj7_A LPBCA thioredoxin; oxid 99.0 1.5E-13 5.2E-18 98.7 0.0 102 19-128 3-105 (106)
199 2b5x_A YKUV protein, TRXY; thi 99.3 2.1E-11 7.3E-16 92.7 12.1 102 151-257 15-146 (148)
200 2dbc_A PDCL2, unnamed protein 99.3 4.8E-12 1.6E-16 95.7 8.2 101 18-128 11-119 (135)
201 1lu4_A Soluble secreted antige 99.3 8.2E-12 2.8E-16 93.7 9.2 86 165-255 23-135 (136)
202 1fo5_A Thioredoxin; disulfide 99.3 5.6E-12 1.9E-16 86.9 7.5 81 38-128 3-84 (85)
203 3kp8_A Vkorc1/thioredoxin doma 99.3 7.5E-13 2.6E-17 95.9 3.1 74 166-254 12-93 (106)
204 2dj0_A Thioredoxin-related tra 99.3 3.1E-13 1.1E-17 102.4 1.0 102 19-127 9-118 (137)
205 1zzo_A RV1677; thioredoxin fol 99.3 1.3E-11 4.4E-16 92.5 10.0 101 150-256 10-135 (136)
206 3ph9_A Anterior gradient prote 99.3 1.1E-11 3.8E-16 95.3 9.7 89 164-256 42-145 (151)
207 3qcp_A QSOX from trypanosoma b 99.3 1.3E-12 4.6E-17 117.4 4.6 96 18-118 24-128 (470)
208 3d22_A TRXH4, thioredoxin H-ty 99.3 1.4E-11 4.7E-16 93.3 9.6 105 19-131 26-133 (139)
209 3emx_A Thioredoxin; structural 99.3 1.5E-12 5E-17 98.5 4.1 100 19-131 18-127 (135)
210 1nho_A Probable thioredoxin; b 99.3 8.1E-12 2.8E-16 86.0 7.3 81 39-129 3-84 (85)
211 3evi_A Phosducin-like protein 99.3 3.7E-12 1.2E-16 94.0 5.8 100 19-127 5-111 (118)
212 2kuc_A Putative disulphide-iso 99.3 4.9E-12 1.7E-16 94.6 6.6 109 20-131 9-122 (130)
213 1ti3_A Thioredoxin H, PTTRXH1; 99.3 2.1E-11 7E-16 88.7 9.7 87 36-130 25-112 (113)
214 3cxg_A Putative thioredoxin; m 99.3 3.7E-12 1.3E-16 96.0 5.8 86 37-130 40-129 (133)
215 2vm1_A Thioredoxin, thioredoxi 99.3 3.5E-11 1.2E-15 88.1 10.8 87 36-130 27-114 (118)
216 3or5_A Thiol:disulfide interch 99.3 2.8E-11 9.6E-16 94.0 10.6 107 150-259 19-154 (165)
217 3raz_A Thioredoxin-related pro 99.3 2.4E-11 8.3E-16 93.3 9.9 93 165-259 23-143 (151)
218 1a8l_A Protein disulfide oxido 99.3 3.1E-11 1.1E-15 99.0 10.9 89 35-129 131-225 (226)
219 1zma_A Bacterocin transport ac 99.2 2.1E-12 7.3E-17 95.1 2.9 92 32-126 24-117 (118)
220 2f51_A Thioredoxin; electron t 99.2 3.6E-11 1.2E-15 88.6 9.0 87 35-129 21-112 (118)
221 2fwh_A Thiol:disulfide interch 99.2 4.3E-11 1.5E-15 90.2 9.5 89 37-128 31-126 (134)
222 2f9s_A Thiol-disulfide oxidore 99.2 5.1E-11 1.7E-15 91.3 10.0 92 165-259 25-141 (151)
223 1z6n_A Hypothetical protein PA 99.2 7.5E-12 2.6E-16 98.1 5.4 94 154-253 42-140 (167)
224 3erw_A Sporulation thiol-disul 99.2 4.7E-11 1.6E-15 90.4 9.0 84 165-251 33-144 (145)
225 3lor_A Thiol-disulfide isomera 99.2 9.5E-11 3.3E-15 90.5 10.9 92 165-258 29-157 (160)
226 1ilo_A Conserved hypothetical 99.2 1.1E-11 3.9E-16 83.8 4.9 73 169-251 2-76 (77)
227 2h30_A Thioredoxin, peptide me 99.2 4E-11 1.4E-15 93.1 8.0 104 149-256 22-156 (164)
228 1un2_A DSBA, thiol-disulfide i 99.2 4.5E-12 1.5E-16 102.1 2.4 115 83-211 40-159 (197)
229 2h8l_A Protein disulfide-isome 99.2 1.3E-10 4.4E-15 97.2 11.0 133 5-151 104-251 (252)
230 3ia1_A THIO-disulfide isomeras 99.2 1.2E-10 4.2E-15 89.4 9.9 89 167-260 31-148 (154)
231 2l5o_A Putative thioredoxin; s 99.2 1.5E-10 5.2E-15 88.7 10.4 93 165-260 27-145 (153)
232 3eyt_A Uncharacterized protein 99.2 1.8E-10 6.2E-15 88.8 10.8 92 165-258 27-154 (158)
233 2lja_A Putative thiol-disulfid 99.2 7E-11 2.4E-15 90.5 8.1 93 165-260 29-147 (152)
234 1wou_A Thioredoxin -related pr 99.2 7.7E-11 2.6E-15 87.4 7.9 84 37-127 24-122 (123)
235 2fgx_A Putative thioredoxin; N 99.1 4.4E-11 1.5E-15 86.2 5.1 75 168-251 30-106 (107)
236 3ewl_A Uncharacterized conserv 99.1 2.3E-10 8E-15 86.5 9.4 87 165-256 26-141 (142)
237 2ju5_A Thioredoxin disulfide i 99.1 2.8E-10 9.4E-15 87.9 9.9 92 36-130 46-152 (154)
238 2trc_P Phosducin, MEKA, PP33; 99.1 1.1E-11 3.8E-16 101.3 2.1 103 18-128 100-211 (217)
239 4f9z_D Endoplasmic reticulum r 99.1 3.8E-10 1.3E-14 92.8 11.1 120 5-132 103-227 (227)
240 4evm_A Thioredoxin family prot 99.1 3.1E-10 1E-14 84.8 9.5 86 165-254 21-137 (138)
241 3hcz_A Possible thiol-disulfid 99.1 8.1E-11 2.8E-15 89.5 6.2 90 165-256 30-146 (148)
242 3eur_A Uncharacterized protein 99.1 3.9E-10 1.3E-14 85.5 9.8 82 166-252 31-141 (142)
243 1lu4_A Soluble secreted antige 99.1 6.6E-10 2.3E-14 83.1 10.9 90 36-129 23-135 (136)
244 2b5x_A YKUV protein, TRXY; thi 99.1 6.4E-10 2.2E-14 84.4 10.9 94 36-131 28-146 (148)
245 2lst_A Thioredoxin; structural 98.7 7.5E-12 2.6E-16 93.6 0.0 100 30-132 12-118 (130)
246 2hls_A Protein disulfide oxido 99.1 7.2E-10 2.5E-14 92.2 11.9 85 37-131 138-227 (243)
247 2b1k_A Thiol:disulfide interch 99.1 1.6E-10 5.5E-15 90.2 7.4 101 149-256 32-160 (168)
248 3lwa_A Secreted thiol-disulfid 99.1 3.3E-10 1.1E-14 89.7 9.3 89 165-256 58-181 (183)
249 3gl3_A Putative thiol:disulfid 99.1 5E-10 1.7E-14 85.7 9.9 93 165-259 27-145 (152)
250 3ec3_A Protein disulfide-isome 99.1 1E-09 3.5E-14 91.6 12.6 121 20-150 119-248 (250)
251 3fkf_A Thiol-disulfide oxidore 99.1 2.9E-10 9.8E-15 86.4 8.5 87 165-256 32-146 (148)
252 1ttz_A Conserved hypothetical 99.1 4.6E-11 1.6E-15 83.1 3.5 74 170-257 3-78 (87)
253 1wmj_A Thioredoxin H-type; str 99.1 4.3E-11 1.5E-15 89.3 3.6 106 18-131 15-123 (130)
254 1jfu_A Thiol:disulfide interch 99.1 8.6E-10 2.9E-14 87.5 11.4 137 118-257 13-181 (186)
255 3ira_A Conserved protein; meth 99.1 7.5E-11 2.6E-15 92.6 4.7 78 152-232 26-117 (173)
256 2lrn_A Thiol:disulfide interch 99.1 6.4E-10 2.2E-14 85.3 9.6 88 165-258 28-143 (152)
257 3erw_A Sporulation thiol-disul 99.1 9E-10 3.1E-14 83.3 10.2 88 36-125 33-144 (145)
258 3hdc_A Thioredoxin family prot 99.1 6.2E-10 2.1E-14 86.0 9.3 92 165-258 40-154 (158)
259 3kp8_A Vkorc1/thioredoxin doma 99.1 1.5E-10 5.1E-15 83.7 5.3 73 38-127 13-92 (106)
260 1zzo_A RV1677; thioredoxin fol 99.1 1.6E-09 5.6E-14 80.8 11.1 90 36-129 24-134 (136)
261 3ha9_A Uncharacterized thiored 99.0 8.6E-10 2.9E-14 85.7 9.5 86 165-256 36-164 (165)
262 3f9u_A Putative exported cytoc 99.0 5.2E-10 1.8E-14 87.8 8.3 91 35-130 45-166 (172)
263 3or5_A Thiol:disulfide interch 99.0 3E-09 1E-13 82.3 12.5 91 36-131 33-152 (165)
264 1a0r_P Phosducin, MEKA, PP33; 99.0 1E-10 3.5E-15 97.1 4.2 103 18-128 113-224 (245)
265 3raz_A Thioredoxin-related pro 99.0 2.6E-09 9E-14 81.7 11.8 95 36-132 23-142 (151)
266 1kng_A Thiol:disulfide interch 99.0 4.4E-10 1.5E-14 86.3 7.3 86 165-256 41-152 (156)
267 3kcm_A Thioredoxin family prot 99.0 8.2E-10 2.8E-14 84.6 8.6 92 165-258 27-145 (154)
268 2f9s_A Thiol-disulfide oxidore 99.0 2.1E-09 7.3E-14 82.1 10.8 95 36-132 25-140 (151)
269 1ilo_A Conserved hypothetical 99.0 1.9E-09 6.6E-14 72.5 9.2 72 41-125 3-76 (77)
270 2lja_A Putative thiol-disulfid 99.0 3.6E-09 1.2E-13 80.8 11.1 95 36-132 29-145 (152)
271 3iv4_A Putative oxidoreductase 99.0 2.6E-10 8.9E-15 82.3 3.7 89 30-125 17-111 (112)
272 2hyx_A Protein DIPZ; thioredox 99.0 2.1E-09 7.2E-14 94.0 9.6 91 165-257 81-200 (352)
273 2lrt_A Uncharacterized protein 99.0 2.5E-09 8.4E-14 82.2 8.7 84 166-251 35-143 (152)
274 2l5o_A Putative thioredoxin; s 98.9 8.6E-09 3E-13 78.7 11.6 93 36-133 27-144 (153)
275 3s9f_A Tryparedoxin; thioredox 98.9 3E-09 1E-13 82.9 8.6 66 165-230 47-138 (165)
276 1o8x_A Tryparedoxin, TRYX, TXN 98.9 2.6E-09 8.7E-14 81.3 7.9 67 165-231 27-121 (146)
277 1i5g_A Tryparedoxin II; electr 98.9 2.6E-09 8.8E-14 81.0 7.8 67 165-231 27-121 (144)
278 2lrn_A Thiol:disulfide interch 98.9 1.6E-08 5.6E-13 77.3 12.4 92 36-132 28-143 (152)
279 2ywi_A Hypothetical conserved 98.9 2E-09 6.8E-14 86.0 7.5 91 166-258 45-176 (196)
280 3hcz_A Possible thiol-disulfid 98.9 7E-09 2.4E-13 78.6 10.1 88 36-128 30-144 (148)
281 3fkf_A Thiol-disulfide oxidore 98.9 1.3E-08 4.3E-13 77.1 11.5 90 36-130 32-146 (148)
282 4evm_A Thioredoxin family prot 98.9 7E-09 2.4E-13 77.2 9.9 91 36-128 21-137 (138)
283 3kh7_A Thiol:disulfide interch 98.9 2.9E-09 9.8E-14 83.9 8.0 86 165-256 57-167 (176)
284 3fw2_A Thiol-disulfide oxidore 98.9 8.8E-09 3E-13 78.7 10.2 87 165-256 32-148 (150)
285 3gl3_A Putative thiol:disulfid 98.9 1.7E-08 5.9E-13 76.9 11.9 94 36-131 27-143 (152)
286 3lor_A Thiol-disulfide isomera 98.9 1E-08 3.5E-13 79.0 10.7 94 36-131 29-156 (160)
287 1o73_A Tryparedoxin; electron 98.9 2.9E-09 1E-13 80.6 7.3 64 165-228 27-116 (144)
288 1sen_A Thioredoxin-like protei 98.9 1E-09 3.5E-14 85.6 4.5 94 32-130 41-148 (164)
289 3ia1_A THIO-disulfide isomeras 98.9 8.3E-09 2.8E-13 79.0 9.3 87 38-131 31-145 (154)
290 3ha9_A Uncharacterized thiored 98.9 1.2E-08 4.2E-13 79.1 10.4 90 36-130 36-164 (165)
291 2dlx_A UBX domain-containing p 98.9 4.4E-09 1.5E-13 80.9 7.6 98 156-258 29-138 (153)
292 3kp9_A Vkorc1/thioredoxin doma 98.9 5.2E-10 1.8E-14 94.8 2.6 70 169-253 200-277 (291)
293 2cvb_A Probable thiol-disulfid 98.9 5.6E-09 1.9E-13 82.9 8.1 89 165-258 32-161 (188)
294 3eyt_A Uncharacterized protein 98.8 2E-08 7E-13 77.1 10.3 94 36-131 27-153 (158)
295 3dml_A Putative uncharacterize 98.8 3.6E-09 1.2E-13 77.2 5.4 86 38-130 19-110 (116)
296 3u5r_E Uncharacterized protein 98.8 1.4E-08 4.7E-13 82.9 9.2 90 166-259 58-190 (218)
297 3lwa_A Secreted thiol-disulfid 98.8 3E-08 1E-12 78.3 10.6 90 36-130 58-181 (183)
298 2h30_A Thioredoxin, peptide me 98.8 1.1E-09 3.8E-14 84.8 2.3 93 36-130 37-156 (164)
299 4fo5_A Thioredoxin-like protei 98.8 1.2E-08 4.2E-13 77.2 7.5 83 165-252 31-141 (143)
300 2ywi_A Hypothetical conserved 98.8 3.4E-08 1.2E-12 78.8 10.3 95 36-132 45-176 (196)
301 2ggt_A SCO1 protein homolog, m 98.8 3.4E-08 1.2E-12 76.3 9.7 90 165-256 22-161 (164)
302 2ls5_A Uncharacterized protein 98.3 7E-10 2.4E-14 85.7 0.0 89 165-256 32-148 (159)
303 2k6v_A Putative cytochrome C o 98.8 9.7E-09 3.3E-13 80.1 6.2 88 165-254 34-171 (172)
304 3kcm_A Thioredoxin family prot 98.8 5.5E-08 1.9E-12 74.3 10.2 94 36-131 27-144 (154)
305 3cmi_A Peroxiredoxin HYR1; thi 98.8 2.9E-08 1E-12 77.6 8.8 88 165-256 31-168 (171)
306 2rli_A SCO2 protein homolog, m 98.8 3.9E-08 1.3E-12 76.5 9.5 90 166-257 26-165 (171)
307 3fw2_A Thiol-disulfide oxidore 98.8 1.4E-07 4.8E-12 71.8 12.3 89 36-129 32-147 (150)
308 1kng_A Thiol:disulfide interch 98.8 2.5E-08 8.5E-13 76.3 8.1 91 36-130 41-152 (156)
309 3hdc_A Thioredoxin family prot 98.7 8.6E-08 2.9E-12 73.8 11.0 90 36-127 40-149 (158)
310 1wjk_A C330018D20RIK protein; 98.7 8.9E-09 3.1E-13 73.4 4.7 79 166-257 15-97 (100)
311 3dwv_A Glutathione peroxidase- 98.7 6.5E-08 2.2E-12 76.8 10.2 90 165-257 45-184 (187)
312 2vup_A Glutathione peroxidase- 98.7 1.1E-07 3.6E-12 75.8 11.3 90 165-257 47-186 (190)
313 2fgx_A Putative thioredoxin; N 98.7 4.9E-08 1.7E-12 70.2 8.3 77 38-125 29-106 (107)
314 2b1k_A Thiol:disulfide interch 98.7 3.2E-08 1.1E-12 76.9 8.1 91 35-130 49-160 (168)
315 2v1m_A Glutathione peroxidase; 98.7 2.3E-08 7.7E-13 77.7 7.2 90 165-256 30-167 (169)
316 2e7p_A Glutaredoxin; thioredox 98.7 1.4E-09 4.8E-14 79.5 0.2 77 167-254 20-106 (116)
317 2p5q_A Glutathione peroxidase 98.7 6.1E-08 2.1E-12 75.3 9.5 89 165-256 31-168 (170)
318 3ira_A Conserved protein; meth 98.7 2.5E-08 8.4E-13 78.2 7.0 95 29-128 31-142 (173)
319 2cvb_A Probable thiol-disulfid 98.7 1E-07 3.5E-12 75.5 10.2 95 37-133 33-162 (188)
320 2lrt_A Uncharacterized protein 98.7 1.5E-07 5.1E-12 72.1 10.7 85 36-122 34-140 (152)
321 3ewl_A Uncharacterized conserv 98.7 6.9E-08 2.4E-12 72.7 8.6 86 36-129 26-140 (142)
322 1z6n_A Hypothetical protein PA 98.7 2.7E-08 9.3E-13 77.7 6.1 83 37-127 54-140 (167)
323 1nm3_A Protein HI0572; hybrid, 98.7 1.8E-07 6.3E-12 77.3 11.4 61 37-98 33-98 (241)
324 1ttz_A Conserved hypothetical 98.7 4.5E-08 1.5E-12 67.8 6.4 74 41-130 3-77 (87)
325 2bmx_A Alkyl hydroperoxidase C 98.7 5.3E-08 1.8E-12 77.9 7.6 89 166-256 45-170 (195)
326 1we0_A Alkyl hydroperoxide red 98.6 3.8E-08 1.3E-12 78.1 6.5 107 166-274 31-177 (187)
327 3drn_A Peroxiredoxin, bacterio 98.6 1.4E-07 4.8E-12 72.9 9.2 87 166-254 28-147 (161)
328 1ego_A Glutaredoxin; electron 98.6 1.8E-08 6E-13 69.2 3.5 75 169-256 2-84 (85)
329 2k8s_A Thioredoxin; dimer, str 98.6 5.2E-09 1.8E-13 71.3 0.7 59 169-231 3-64 (80)
330 1jfu_A Thiol:disulfide interch 98.6 4.3E-07 1.5E-11 71.7 12.0 94 36-131 59-181 (186)
331 2lus_A Thioredoxion; CR-Trp16, 98.1 4.1E-09 1.4E-13 79.5 0.0 67 166-232 25-121 (143)
332 2p31_A CL683, glutathione pero 98.6 9E-08 3.1E-12 75.6 7.7 88 165-255 48-180 (181)
333 2obi_A PHGPX, GPX-4, phospholi 98.6 1.4E-07 4.8E-12 74.5 8.7 88 165-254 46-182 (183)
334 3ph9_A Anterior gradient prote 98.6 8.4E-08 2.9E-12 73.5 7.1 79 31-115 38-120 (151)
335 2f8a_A Glutathione peroxidase 98.6 2.4E-07 8.3E-12 74.9 10.2 44 165-209 46-89 (208)
336 3u5r_E Uncharacterized protein 98.6 2.8E-07 9.6E-12 75.1 10.6 96 36-133 58-190 (218)
337 3kh7_A Thiol:disulfide interch 98.6 2E-07 7E-12 73.2 9.2 89 37-130 58-167 (176)
338 2hyx_A Protein DIPZ; thioredox 98.6 2.3E-07 7.7E-12 81.1 10.0 92 37-130 82-199 (352)
339 1i5g_A Tryparedoxin II; electr 98.6 3.8E-07 1.3E-11 68.9 10.1 66 36-103 27-116 (144)
340 2dlx_A UBX domain-containing p 98.6 3.4E-07 1.2E-11 70.3 9.5 93 35-131 40-137 (153)
341 3eur_A Uncharacterized protein 98.6 1.8E-07 6.2E-12 70.5 7.9 85 37-126 31-141 (142)
342 3kp9_A Vkorc1/thioredoxin doma 98.6 6.1E-08 2.1E-12 82.1 5.7 74 40-127 200-277 (291)
343 1o8x_A Tryparedoxin, TRYX, TXN 98.6 3.8E-07 1.3E-11 69.1 9.5 66 36-103 27-116 (146)
344 1zof_A Alkyl hydroperoxide-red 98.5 8.9E-08 3E-12 76.7 5.8 89 165-255 32-160 (198)
345 1o73_A Tryparedoxin; electron 98.5 4.8E-07 1.6E-11 68.2 9.3 66 36-103 27-116 (144)
346 3kij_A Probable glutathione pe 98.5 1.3E-07 4.5E-12 74.5 6.4 89 165-256 37-170 (180)
347 1xvw_A Hypothetical protein RV 98.5 2.6E-07 9E-12 71.0 7.5 86 166-253 35-157 (160)
348 2rli_A SCO2 protein homolog, m 98.5 1.6E-06 5.6E-11 67.2 10.9 92 37-130 26-164 (171)
349 1qmv_A Human thioredoxin perox 98.4 5.6E-07 1.9E-11 71.9 8.3 89 165-255 33-162 (197)
350 2gs3_A PHGPX, GPX-4, phospholi 98.4 9E-07 3.1E-11 70.0 9.3 88 165-254 48-184 (185)
351 3s9f_A Tryparedoxin; thioredox 98.4 1.3E-06 4.4E-11 67.8 9.9 68 36-105 47-138 (165)
352 2ggt_A SCO1 protein homolog, m 98.4 1.1E-06 3.7E-11 67.7 9.3 92 37-130 23-161 (164)
353 4fo5_A Thioredoxin-like protei 98.4 1.1E-06 3.6E-11 66.3 8.9 86 36-126 31-141 (143)
354 1xzo_A BSSCO, hypothetical pro 98.4 1.4E-06 4.9E-11 67.7 9.6 91 165-256 32-172 (174)
355 2l4c_A Endoplasmic reticulum r 98.4 9.1E-07 3.1E-11 65.4 7.9 95 149-254 22-122 (124)
356 3cmi_A Peroxiredoxin HYR1; thi 98.4 2E-06 6.9E-11 66.9 9.6 92 36-130 31-168 (171)
357 1uul_A Tryparedoxin peroxidase 98.3 8.3E-07 2.8E-11 71.3 7.0 88 166-255 36-164 (202)
358 1eej_A Thiol:disulfide interch 98.3 4.7E-07 1.6E-11 73.6 5.6 80 165-255 85-210 (216)
359 3gyk_A 27KDA outer membrane pr 98.3 7.4E-07 2.5E-11 69.7 6.4 81 166-256 22-173 (175)
360 3drn_A Peroxiredoxin, bacterio 98.3 3.6E-06 1.2E-10 64.8 10.1 91 36-128 28-147 (161)
361 2p5q_A Glutathione peroxidase 98.3 3.1E-06 1E-10 65.5 9.7 93 36-130 31-168 (170)
362 2vup_A Glutathione peroxidase- 98.3 4.8E-06 1.6E-10 66.1 10.9 93 36-130 47-185 (190)
363 1zye_A Thioredoxin-dependent p 98.3 1.4E-06 4.8E-11 71.0 7.6 89 166-256 56-185 (220)
364 2bmx_A Alkyl hydroperoxidase C 98.3 2.7E-06 9.4E-11 67.7 9.1 93 37-131 45-171 (195)
365 2h01_A 2-Cys peroxiredoxin; th 98.3 1.1E-06 3.9E-11 69.8 6.7 89 165-255 30-158 (192)
366 2i81_A 2-Cys peroxiredoxin; st 98.3 1.8E-06 6.2E-11 70.0 7.7 89 165-255 51-179 (213)
367 2k6v_A Putative cytochrome C o 98.3 2.3E-06 7.8E-11 66.3 7.6 90 36-128 34-171 (172)
368 1wjk_A C330018D20RIK protein; 98.3 1.1E-06 3.8E-11 62.3 5.2 79 36-129 14-95 (100)
369 1xvw_A Hypothetical protein RV 98.2 4.2E-06 1.4E-10 64.2 8.6 90 36-127 35-157 (160)
370 2v1m_A Glutathione peroxidase; 98.2 1E-05 3.5E-10 62.4 10.9 93 36-130 30-167 (169)
371 2k8s_A Thioredoxin; dimer, str 98.2 7.3E-07 2.5E-11 60.4 3.7 57 40-101 3-61 (80)
372 2b7k_A SCO1 protein; metalloch 98.2 2.4E-06 8.1E-11 68.5 7.3 46 165-210 40-88 (200)
373 2ls5_A Uncharacterized protein 97.5 1.5E-07 5.1E-12 72.4 0.0 90 36-131 32-149 (159)
374 3dwv_A Glutathione peroxidase- 98.2 1E-05 3.5E-10 64.0 10.6 93 36-131 45-184 (187)
375 1hyu_A AHPF, alkyl hydroperoxi 98.2 6.8E-06 2.3E-10 75.6 10.7 81 37-128 117-198 (521)
376 2jsy_A Probable thiol peroxida 98.2 5.8E-06 2E-10 63.9 8.7 87 165-255 43-166 (167)
377 1h75_A Glutaredoxin-like prote 98.2 6.6E-07 2.2E-11 60.6 2.9 69 170-254 3-76 (81)
378 1we0_A Alkyl hydroperoxide red 98.2 3.6E-06 1.2E-10 66.5 7.7 92 37-130 31-157 (187)
379 1t3b_A Thiol:disulfide interch 98.2 1.6E-06 5.4E-11 70.3 5.5 78 165-253 85-208 (211)
380 3ztl_A Thioredoxin peroxidase; 98.2 5.2E-06 1.8E-10 67.7 8.5 89 165-255 68-197 (222)
381 1ego_A Glutaredoxin; electron 98.2 4.6E-06 1.6E-10 56.8 6.7 77 41-129 3-83 (85)
382 1zof_A Alkyl hydroperoxide-red 98.2 2.6E-06 9E-11 68.0 5.9 91 37-129 33-160 (198)
383 1r7h_A NRDH-redoxin; thioredox 98.1 5.4E-06 1.8E-10 54.9 6.4 66 170-251 3-73 (75)
384 2p31_A CL683, glutathione pero 98.1 7.2E-06 2.5E-10 64.5 7.9 92 36-129 48-180 (181)
385 2lus_A Thioredoxion; CR-Trp16, 97.4 3.2E-07 1.1E-11 68.9 0.0 69 35-105 24-118 (143)
386 3gkn_A Bacterioferritin comigr 98.1 8.7E-06 3E-10 62.6 8.1 87 166-254 35-160 (163)
387 3kij_A Probable glutathione pe 98.0 2.9E-05 9.9E-10 60.8 10.0 92 36-129 37-169 (180)
388 1xvq_A Thiol peroxidase; thior 98.0 2.2E-05 7.5E-10 61.3 8.8 40 166-209 44-84 (175)
389 2f8a_A Glutathione peroxidase 98.0 3.3E-05 1.1E-09 62.2 10.0 42 36-77 46-89 (208)
390 3h93_A Thiol:disulfide interch 98.0 1.9E-05 6.5E-10 62.6 8.3 42 165-208 24-65 (192)
391 1v58_A Thiol:disulfide interch 98.0 8.3E-06 2.8E-10 67.4 6.4 85 166-256 97-233 (241)
392 1qmv_A Human thioredoxin perox 98.0 2.4E-05 8.2E-10 62.3 8.9 91 37-129 34-162 (197)
393 2gs3_A PHGPX, GPX-4, phospholi 98.0 4.2E-05 1.4E-09 60.2 10.2 42 36-77 48-91 (185)
394 2obi_A PHGPX, GPX-4, phospholi 98.0 3.7E-05 1.3E-09 60.3 9.9 90 36-127 46-181 (183)
395 1uul_A Tryparedoxin peroxidase 98.0 2.5E-05 8.5E-10 62.5 8.4 91 37-129 36-164 (202)
396 2a4v_A Peroxiredoxin DOT5; yea 98.0 2.7E-05 9.1E-10 59.7 8.0 41 167-209 36-77 (159)
397 2i3y_A Epididymal secretory gl 98.0 9.1E-05 3.1E-09 60.0 11.5 43 165-209 55-97 (215)
398 1zye_A Thioredoxin-dependent p 97.9 3.6E-05 1.2E-09 62.5 8.5 92 37-130 56-185 (220)
399 2l4c_A Endoplasmic reticulum r 97.9 2.4E-05 8.4E-10 57.6 6.5 86 30-128 32-122 (124)
400 1kte_A Thioltransferase; redox 97.9 1.9E-06 6.6E-11 61.4 0.4 57 169-232 13-78 (105)
401 3bj5_A Protein disulfide-isome 97.9 7.4E-05 2.5E-09 56.7 9.2 105 148-256 14-127 (147)
402 2i81_A 2-Cys peroxiredoxin; st 97.9 5.6E-05 1.9E-09 61.1 8.9 92 36-129 51-179 (213)
403 2e7p_A Glutaredoxin; thioredox 97.9 4.4E-06 1.5E-10 60.5 1.9 80 38-127 20-105 (116)
404 3gyk_A 27KDA outer membrane pr 97.9 8.4E-05 2.9E-09 57.8 9.3 86 35-129 20-172 (175)
405 2b7k_A SCO1 protein; metalloch 97.9 0.00013 4.3E-09 58.3 10.5 93 36-130 40-179 (200)
406 2h01_A 2-Cys peroxiredoxin; th 97.8 4.9E-05 1.7E-09 60.2 7.8 92 36-129 30-158 (192)
407 3ixr_A Bacterioferritin comigr 97.8 5.7E-05 2E-09 59.2 7.9 88 166-255 51-177 (179)
408 3a2v_A Probable peroxiredoxin; 97.8 3.6E-05 1.2E-09 63.8 6.7 89 165-255 32-161 (249)
409 2r37_A Glutathione peroxidase 97.8 0.00018 6.1E-09 57.9 10.6 43 165-209 37-79 (207)
410 3me7_A Putative uncharacterize 97.8 0.00021 7.2E-09 55.4 10.7 94 166-260 28-166 (170)
411 2c0d_A Thioredoxin peroxidase 97.8 7.4E-05 2.5E-09 60.8 8.3 89 165-255 55-183 (221)
412 2jsy_A Probable thiol peroxida 97.8 0.00018 6.1E-09 55.4 10.1 90 37-129 44-166 (167)
413 3ztl_A Thioredoxin peroxidase; 97.7 0.00014 4.8E-09 59.1 9.3 91 36-128 68-196 (222)
414 2pn8_A Peroxiredoxin-4; thiore 97.7 0.00015 5.1E-09 58.5 9.1 88 166-255 48-176 (211)
415 2lqo_A Putative glutaredoxin R 97.7 5.2E-05 1.8E-09 52.7 5.4 75 169-258 5-86 (92)
416 1eej_A Thiol:disulfide interch 97.7 6.8E-05 2.3E-09 60.7 6.6 84 36-129 85-210 (216)
417 1n8j_A AHPC, alkyl hydroperoxi 97.7 8.2E-05 2.8E-09 58.7 6.9 107 166-274 30-176 (186)
418 1xzo_A BSSCO, hypothetical pro 97.6 0.00026 9E-09 54.6 9.1 93 36-130 32-172 (174)
419 3gkn_A Bacterioferritin comigr 97.6 0.00024 8.3E-09 54.3 8.8 90 37-128 35-160 (163)
420 4hde_A SCO1/SENC family lipopr 97.6 0.00069 2.3E-08 52.5 11.3 46 165-210 31-78 (170)
421 2hze_A Glutaredoxin-1; thiored 97.6 1.8E-05 6E-10 57.4 2.0 59 167-232 18-85 (114)
422 3qpm_A Peroxiredoxin; oxidored 97.6 0.00038 1.3E-08 57.3 9.5 88 166-255 77-205 (240)
423 3hd5_A Thiol:disulfide interch 97.5 0.00014 4.9E-09 57.6 6.5 43 165-209 24-66 (195)
424 1t3b_A Thiol:disulfide interch 97.5 0.00027 9.4E-09 56.9 8.2 82 36-127 85-208 (211)
425 2klx_A Glutaredoxin; thioredox 97.5 7.5E-05 2.6E-09 51.3 4.0 53 169-231 7-64 (89)
426 3ic4_A Glutaredoxin (GRX-1); s 97.5 8.4E-05 2.9E-09 51.3 4.1 67 170-252 14-91 (92)
427 4g2e_A Peroxiredoxin; redox pr 97.5 3E-05 1E-09 59.5 1.8 45 165-210 29-74 (157)
428 3c1r_A Glutaredoxin-1; oxidize 97.5 6.1E-05 2.1E-09 54.9 3.0 56 170-232 27-92 (118)
429 3nzn_A Glutaredoxin; structura 97.5 0.00027 9.4E-09 50.0 6.3 71 166-251 20-101 (103)
430 3qmx_A Glutaredoxin A, glutare 97.4 0.00014 4.7E-09 51.2 4.2 56 166-231 14-76 (99)
431 3hd5_A Thiol:disulfide interch 97.4 0.00047 1.6E-08 54.5 7.9 43 35-77 23-66 (195)
432 2cq9_A GLRX2 protein, glutared 97.4 0.00011 3.9E-09 54.4 3.8 83 156-253 18-112 (130)
433 3hz8_A Thiol:disulfide interch 97.4 0.00026 8.9E-09 56.2 6.0 43 165-209 23-65 (193)
434 2ec4_A FAS-associated factor 1 97.4 0.00082 2.8E-08 52.6 8.7 91 164-256 53-168 (178)
435 3h93_A Thiol:disulfide interch 97.3 0.00058 2E-08 53.9 7.7 41 36-76 24-65 (192)
436 2ht9_A Glutaredoxin-2; thiored 97.3 0.0001 3.5E-09 55.9 3.0 64 156-232 40-112 (146)
437 4gqc_A Thiol peroxidase, perox 97.3 2.8E-05 9.7E-10 60.1 -0.3 97 158-257 26-161 (164)
438 1fov_A Glutaredoxin 3, GRX3; a 97.3 0.00037 1.3E-08 46.6 5.4 52 170-231 3-60 (82)
439 3tjj_A Peroxiredoxin-4; thiore 97.3 0.0007 2.4E-08 56.2 8.0 88 166-255 91-219 (254)
440 1xvq_A Thiol peroxidase; thior 97.3 0.0011 3.9E-08 51.4 8.8 89 37-128 44-163 (175)
441 1v58_A Thiol:disulfide interch 97.3 0.00073 2.5E-08 55.6 7.9 88 36-128 96-231 (241)
442 3ixr_A Bacterioferritin comigr 97.3 0.0014 4.9E-08 51.0 9.1 90 37-128 51-176 (179)
443 3gv1_A Disulfide interchange p 97.2 0.00045 1.5E-08 52.4 5.6 80 164-256 12-139 (147)
444 2yan_A Glutaredoxin-3; oxidore 97.2 0.00019 6.5E-09 51.0 3.3 64 156-232 8-82 (105)
445 1r7h_A NRDH-redoxin; thioredox 97.2 0.0015 5.1E-08 42.7 7.5 67 41-125 3-73 (75)
446 3a2v_A Probable peroxiredoxin; 97.2 0.00066 2.3E-08 56.1 6.8 89 40-130 37-162 (249)
447 2a4v_A Peroxiredoxin DOT5; yea 97.2 0.002 6.8E-08 49.0 9.1 77 39-118 37-139 (159)
448 3p7x_A Probable thiol peroxida 97.2 0.00045 1.5E-08 53.1 5.4 84 166-253 46-165 (166)
449 2c0d_A Thioredoxin peroxidase 97.2 0.0011 3.9E-08 53.6 8.0 92 36-129 55-183 (221)
450 2wfc_A Peroxiredoxin 5, PRDX5; 97.2 0.00052 1.8E-08 53.1 5.5 45 165-210 30-77 (167)
451 3rhb_A ATGRXC5, glutaredoxin-C 97.1 0.00063 2.2E-08 48.8 5.3 53 170-232 21-83 (113)
452 1tp9_A Peroxiredoxin, PRX D (t 97.1 0.00053 1.8E-08 52.6 5.1 44 165-209 34-80 (162)
453 3msz_A Glutaredoxin 1; alpha-b 97.1 0.00035 1.2E-08 47.5 3.7 73 168-256 4-87 (89)
454 1h75_A Glutaredoxin-like prote 97.1 0.00026 9E-09 47.4 2.9 70 41-128 3-76 (81)
455 1n8j_A AHPC, alkyl hydroperoxi 97.1 0.0016 5.6E-08 51.1 7.9 92 37-130 30-156 (186)
456 2pn8_A Peroxiredoxin-4; thiore 97.1 0.0018 6.1E-08 52.0 8.2 91 37-129 48-176 (211)
457 1q98_A Thiol peroxidase, TPX; 97.1 0.00053 1.8E-08 52.7 4.9 42 166-210 43-85 (165)
458 2yzh_A Probable thiol peroxida 97.0 0.00064 2.2E-08 52.5 4.9 85 166-254 47-170 (171)
459 3qpm_A Peroxiredoxin; oxidored 97.0 0.0024 8.2E-08 52.4 8.6 91 37-129 77-205 (240)
460 2i3y_A Epididymal secretory gl 97.0 0.0054 1.9E-07 49.4 10.5 41 37-78 56-98 (215)
461 1psq_A Probable thiol peroxida 97.0 0.00071 2.4E-08 51.8 4.9 85 165-253 41-162 (163)
462 2khp_A Glutaredoxin; thioredox 97.0 0.00054 1.8E-08 47.1 3.6 53 169-231 7-65 (92)
463 3me7_A Putative uncharacterize 97.0 0.0055 1.9E-07 47.2 9.6 92 37-130 28-162 (170)
464 4g2e_A Peroxiredoxin; redox pr 97.0 0.00064 2.2E-08 51.9 4.1 89 37-127 30-155 (157)
465 1nm3_A Protein HI0572; hybrid, 96.9 0.0011 3.6E-08 54.4 5.6 45 165-210 32-79 (241)
466 2pwj_A Mitochondrial peroxired 96.9 0.00046 1.6E-08 53.6 3.0 43 167-210 45-89 (171)
467 2r37_A Glutathione peroxidase 96.9 0.0069 2.4E-07 48.4 10.0 41 36-77 37-79 (207)
468 3l9v_A Putative thiol-disulfid 96.9 0.00052 1.8E-08 54.2 3.2 42 167-210 15-59 (189)
469 3uma_A Hypothetical peroxiredo 96.9 0.0012 4E-08 52.0 4.9 44 166-210 56-102 (184)
470 4dvc_A Thiol:disulfide interch 96.8 0.012 4E-07 45.6 10.7 40 37-76 21-61 (184)
471 1kte_A Thioltransferase; redox 96.8 0.0014 4.6E-08 46.2 4.3 55 40-98 13-72 (105)
472 3zrd_A Thiol peroxidase; oxido 96.7 0.0014 4.9E-08 52.1 4.7 42 166-210 78-120 (200)
473 3tjj_A Peroxiredoxin-4; thiore 96.7 0.0039 1.3E-07 51.6 7.2 90 37-128 91-218 (254)
474 3p7x_A Probable thiol peroxida 96.6 0.0051 1.8E-07 47.1 7.0 53 37-91 46-100 (166)
475 1wik_A Thioredoxin-like protei 96.6 0.002 7E-08 45.9 4.3 65 155-232 5-80 (109)
476 2yzh_A Probable thiol peroxida 96.6 0.0029 9.9E-08 48.7 5.5 60 37-98 47-108 (171)
477 1un2_A DSBA, thiol-disulfide i 96.6 0.00093 3.2E-08 53.2 2.5 44 36-79 112-159 (197)
478 1psq_A Probable thiol peroxida 96.6 0.0028 9.7E-08 48.4 5.2 60 37-98 42-103 (163)
479 3mng_A Peroxiredoxin-5, mitoch 96.5 0.0027 9.1E-08 49.4 4.9 44 166-210 43-89 (173)
480 3ctg_A Glutaredoxin-2; reduced 96.5 0.00077 2.6E-08 49.8 1.6 56 170-232 39-104 (129)
481 2hze_A Glutaredoxin-1; thiored 96.5 0.0016 5.5E-08 46.8 3.1 55 40-98 20-79 (114)
482 2v2g_A Peroxiredoxin 6; oxidor 96.5 0.0045 1.5E-07 50.6 5.9 87 167-255 30-164 (233)
483 1q98_A Thiol peroxidase, TPX; 96.5 0.0022 7.5E-08 49.1 3.9 60 37-98 43-104 (165)
484 1prx_A HORF6; peroxiredoxin, h 96.4 0.0069 2.4E-07 49.1 7.0 87 168-256 34-169 (224)
485 2rem_A Disulfide oxidoreductas 96.4 0.034 1.1E-06 43.4 10.7 40 37-76 25-65 (193)
486 2ec4_A FAS-associated factor 1 96.4 0.032 1.1E-06 43.4 10.2 94 35-130 53-168 (178)
487 3feu_A Putative lipoprotein; a 96.4 0.0021 7E-08 50.6 3.3 40 166-209 22-61 (185)
488 2wfc_A Peroxiredoxin 5, PRDX5; 96.4 0.005 1.7E-07 47.4 5.5 61 37-98 31-97 (167)
489 1z6m_A Conserved hypothetical 96.3 0.0092 3.2E-07 46.0 6.9 43 166-208 27-69 (175)
490 3h8q_A Thioredoxin reductase 3 96.3 0.0038 1.3E-07 44.8 4.2 53 170-232 19-80 (114)
491 2znm_A Thiol:disulfide interch 96.3 0.0031 1.1E-07 49.6 4.0 43 165-209 21-63 (195)
492 2znm_A Thiol:disulfide interch 96.3 0.014 4.9E-07 45.7 7.8 41 36-76 21-62 (195)
493 3gv1_A Disulfide interchange p 96.2 0.021 7.3E-07 42.9 8.1 83 35-129 12-138 (147)
494 2rem_A Disulfide oxidoreductas 96.2 0.0092 3.1E-07 46.7 6.4 41 166-208 25-65 (193)
495 1z6m_A Conserved hypothetical 96.1 0.038 1.3E-06 42.4 9.5 41 36-76 26-69 (175)
496 2pwj_A Mitochondrial peroxired 96.1 0.0029 9.9E-08 49.0 2.9 62 36-98 43-109 (171)
497 4gqc_A Thiol peroxidase, perox 96.1 0.0014 4.7E-08 50.5 1.0 92 36-129 32-159 (164)
498 1tp9_A Peroxiredoxin, PRX D (t 96.0 0.0059 2E-07 46.6 4.3 62 36-98 34-101 (162)
499 2cq9_A GLRX2 protein, glutared 96.0 0.011 3.9E-07 43.4 5.7 51 41-98 29-84 (130)
500 3uma_A Hypothetical peroxiredo 96.0 0.0053 1.8E-07 48.2 4.0 61 37-98 56-122 (184)
No 1
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=100.00 E-value=4.8e-36 Score=265.51 Aligned_cols=244 Identities=30% Similarity=0.563 Sum_probs=205.3
Q ss_pred HHHHHHhccCCcccccccCCCCceeeeeeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCC--Cccc
Q 023747 5 LLKQATLRLPKSCTLISNLPTTSLELLKVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIA--DEDL 81 (278)
Q Consensus 5 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~--~~~~ 81 (278)
|..++....... ++.+++.++..+.. +...+++++||++| ++|+++.|.|+++|++|++++.|+.+||+ ..
T Consensus 107 i~~fi~~~~~p~--v~~~~~~~~~~~~~--~~~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~i~f~~vd~~~~~~-- 180 (361)
T 3uem_A 107 LLDFIKHNQLPL--VIEFTEQTAPKIFG--GEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFIFIDSDHTDN-- 180 (361)
T ss_dssp HHHHHHHHSSCS--EEECSTTTHHHHHS--CSCCEEEEEECCSSSSSHHHHHHHHHHHHGGGTTTCEEEEECTTSGGG--
T ss_pred HHHHHHHcCCCc--ceecCcccHHHHhc--CCCCcEEEEEEeCCchhHHHHHHHHHHHHHHccCceEEEEecCChHHH--
Confidence 555555543222 45566666553321 23346789999999 99999999999999999999999999999 45
Q ss_pred chhHHHHcCCCC--CCceEEEEecC-CcceeecCC-CCCChHHHHHHHHHHhcCcccccccCCCCCCC-CCCCeEEEccc
Q 023747 82 AKPFLTLFGLEE--SKNTVVTAFDN-KAISKFLLE-SDLTPSNIEEFCSRLLHGTLTPYLKSQPIPDN-TNANVQIVVGK 156 (278)
Q Consensus 82 ~~~l~~~~~i~~--~~Ptl~~~~~~-~~~~~~~~~-g~~~~~~i~~fi~~~~~~~~~~~~~s~~~p~~-~~~~v~~l~~~ 156 (278)
+.+|+.|||.+ + |++ .+++. +...+|.+. |..+.++|.+|+.++++|++.+.++++++|.. ....|..++++
T Consensus 181 -~~~~~~fgi~~~~~-P~~-~~~~~~~~~~ky~~~~~~~~~~~l~~fi~~~l~g~~~~~~~s~~~p~~~~~~~v~~l~~~ 257 (361)
T 3uem_A 181 -QRILEFFGLKKEEC-PAV-RLITLEEEMTKYKPESEELTAERITEFCHRFLEGKIKPHLMSQELPEDWDKQPVKVLVGK 257 (361)
T ss_dssp -HHHHHHTTCCTTTC-SEE-EEEECC--CCEECCSSCCCCHHHHHHHHHHHHTTCSCCCCBCCCCCTTTTTSSSEEECTT
T ss_pred -HHHHHHcCCCccCC-ccE-EEEEcCCcccccCCCccccCHHHHHHHHHHHhcCCCcccccCCCCCcccccCCcEEeecC
Confidence 89999999997 8 999 66665 444577654 67999999999999999999999999999976 66789999999
Q ss_pred chHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCCCCCCCcCCCeEEEEeCCCccCce
Q 023747 157 TFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASANEHPKLQVEEYPTLLFYPAGDKANPI 236 (278)
Q Consensus 157 ~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~~~~~~~i~~~Ptl~~f~~g~~~~~~ 236 (278)
+|++.+.+.+++++|.||||||++|+.+.|.|.+++..+++..++.++.+|++.+...+|+|.++||+++|++|+...+.
T Consensus 258 ~f~~~~~~~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~~~~~~~~v~~~Pt~~~~~~~~~~~~~ 337 (361)
T 3uem_A 258 NFEDVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANEVEAVKVHSFPTLKFFPASADRTVI 337 (361)
T ss_dssp THHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTTCBCSSCCCCSSSEEEEECSSSSCCCE
T ss_pred chhhhcccCCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCccchhhcCCcccCeEEEEECCCCccee
Confidence 99999988899999999999999999999999999999987557999999999998789999999999999777433367
Q ss_pred EecCCCCHHHHHHHHHHHhcc
Q 023747 237 KVSARSSSKNIAAFIKEQLKE 257 (278)
Q Consensus 237 ~~~g~~~~~~l~~~i~~~~~~ 257 (278)
.|.|.++.++|.+||+++...
T Consensus 338 ~~~G~~~~~~l~~~l~~~~~~ 358 (361)
T 3uem_A 338 DYNGERTLDGFKKFLESGGQD 358 (361)
T ss_dssp ECCSCSSHHHHHHHHTTTSCS
T ss_pred EecCCCCHHHHHHHHHhcCCC
Confidence 899999999999999987654
No 2
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=100.00 E-value=1.1e-33 Score=236.24 Aligned_cols=218 Identities=21% Similarity=0.313 Sum_probs=186.2
Q ss_pred ccccccCCCCceeeeeeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCc---eEEEEEeCCCcccchhHHHHcCCC
Q 023747 17 CTLISNLPTTSLELLKVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGK---IMFTAVDIADEDLAKPFLTLFGLE 92 (278)
Q Consensus 17 ~~~v~~~~~~~~~~~~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~---v~f~~vd~~~~~~~~~l~~~~~i~ 92 (278)
..++.++..++...+ ..+++++|.||++| ++|+.+.|.|.++++++++. +.|+.|||+.. +.+|++|+|.
T Consensus 15 ~~v~~l~~~~~~~~~---~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~---~~l~~~~~v~ 88 (241)
T 3idv_A 15 NGVLVLNDANFDNFV---ADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSA---SVLASRFDVS 88 (241)
T ss_dssp TTEEEECTTTHHHHH---TTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTC---HHHHHHTTCC
T ss_pred CCcEEecccCHHHHH---hcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCC---HHHHHhcCCC
Confidence 346777777766543 56788999999999 99999999999999999876 99999999999 8999999999
Q ss_pred CCCceEEEEecCCcceeecCCCCCChHHHHHHHHHHhcCcccccccCCCCCCCCCCCeEEEcccchHHHhhcCCCcEEEE
Q 023747 93 ESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIVVGKTFDDLVLNSHKDVLLE 172 (278)
Q Consensus 93 ~~~Ptl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~~~~~~~~s~~~p~~~~~~v~~l~~~~~~~~i~~~~~~~~v~ 172 (278)
++ ||+ .+++.+... .+.|.++.+++.+|+.+.......+ ....+..++.++|++.+ ..+++++|.
T Consensus 89 ~~-Pt~-~~~~~g~~~--~~~g~~~~~~l~~~i~~~~~~~~~~----------~~~~~~~~~~~~~~~~~-~~~~~~~v~ 153 (241)
T 3idv_A 89 GY-PTI-KILKKGQAV--DYEGSRTQEEIVAKVREVSQPDWTP----------PPEVTLVLTKENFDEVV-NDADIILVE 153 (241)
T ss_dssp SS-SEE-EEEETTEEE--ECCSCSCHHHHHHHHHHHHSTTCCC----------CCCSSEECCTTTHHHHH-HHCSEEEEE
T ss_pred cC-CEE-EEEcCCCcc--cccCcccHHHHHHHHhhccCccccc----------ccccceeccHHHHHHhh-ccCCeEEEE
Confidence 99 999 666655433 4689999999999999987543211 34468889999999987 456899999
Q ss_pred EECCCChhHHHHHHHHHHHHHHhcCC-CceEEEEEeCCCC-CC-CCCCCcCCCeEEEEeCCCccCceEecCCCCHHHHHH
Q 023747 173 VYTPWCVTCETTSKQIEKLAKHFKGL-DNLVIAKIDASAN-EH-PKLQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAA 249 (278)
Q Consensus 173 f~~~~c~~c~~~~~~~~~~a~~~~~~-~~~~~~~vd~~~~-~~-~~~~i~~~Ptl~~f~~g~~~~~~~~~g~~~~~~l~~ 249 (278)
||++||++|+.+.|.+.+++..+.+. .++.|+.+|++.+ ++ .+|+|.++||+++|++|+. +.|.|..+.++|.+
T Consensus 154 f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~---~~~~g~~~~~~l~~ 230 (241)
T 3idv_A 154 FYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAETDLAKRFDVSGYPTLKIFRKGRP---YDYNGPREKYGIVD 230 (241)
T ss_dssp EECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSSSEEEEEETTEE---EECCSCCSHHHHHH
T ss_pred EECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCCCHHHHHHcCCcccCEEEEEECCeE---EEecCCCCHHHHHH
Confidence 99999999999999999999999763 2599999999988 66 5899999999999998864 46999999999999
Q ss_pred HHHHHhccc
Q 023747 250 FIKEQLKEK 258 (278)
Q Consensus 250 ~i~~~~~~~ 258 (278)
||++++++.
T Consensus 231 ~l~~~~~~~ 239 (241)
T 3idv_A 231 YMIEQSGAA 239 (241)
T ss_dssp HHHHHTTCT
T ss_pred HHHhhhCCC
Confidence 999999864
No 3
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.97 E-value=4.1e-30 Score=235.71 Aligned_cols=233 Identities=27% Similarity=0.490 Sum_probs=191.6
Q ss_pred CceEEEEEeCc--c---chHHHHHHHHHHHHHhcCc---eEEEEEeCCCcccchhHHHHcCCC----CCCceEEEEecCC
Q 023747 38 TLDMVYVFAKA--D---DLKSLLEPLEDIARNFKGK---IMFTAVDIADEDLAKPFLTLFGLE----ESKNTVVTAFDNK 105 (278)
Q Consensus 38 ~~~~v~F~~~~--~---~c~~~~~~~~~la~~~~~~---v~f~~vd~~~~~~~~~l~~~~~i~----~~~Ptl~~~~~~~ 105 (278)
.+.++.|+... . .++.+...+.++|++|+++ +.|+.+|+... ...++.||+. .. |.+ .+++ .
T Consensus 234 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~k~~~i~F~~~D~~~~---~~~l~~~gl~~~~~~~-P~~-~i~~-~ 307 (481)
T 3f8u_A 234 KDLLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHKLNFAVASRKTF---SHELSDFGLESTAGEI-PVV-AIRT-A 307 (481)
T ss_dssp SSEEEEEECCCTTTCHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEETTTT---HHHHGGGTCCCCTTCS-CEE-EEEC-S
T ss_pred CCceEEEEecccccchhhHHHHHHHHHHHHHHhcCCCceEEEEEEcHHHH---HHHHHHcCCCcccCCC-cEE-EEEc-C
Confidence 34666666543 2 2334688899999999988 99999999998 8899999998 45 999 7776 3
Q ss_pred cceeecCCCCCChH--HHHHHHHHHhcCcccccccCCCCCCCCCCCeEEEcccchHHHhhcCCCcEEEEEECCCChhHHH
Q 023747 106 AISKFLLESDLTPS--NIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCET 183 (278)
Q Consensus 106 ~~~~~~~~g~~~~~--~i~~fi~~~~~~~~~~~~~s~~~p~~~~~~v~~l~~~~~~~~i~~~~~~~~v~f~~~~c~~c~~ 183 (278)
.+.+|.+.+..+.+ +|.+|+.++++|++.++++|+++|......+..+++++|++.+.+.+++++|.|||+||++|+.
T Consensus 308 ~~~ky~~~~~~t~e~~~l~~f~~~~~~g~~~~~~~s~~~p~~~~~~v~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~ 387 (481)
T 3f8u_A 308 KGEKFVMQEEFSRDGKALERFLQDYFDGNLKRYLKSEPIPESNDGPVKVVVAENFDEIVNNENKDVLIEFYAPWCGHCKN 387 (481)
T ss_dssp SSCEEECCSCCCTTSHHHHHHHHHHHHTCCCCCCCCCCCCSCCCSSSEEECTTTHHHHHTCTTCEEEEEEECTTBHHHHH
T ss_pred CCcccCCCcccCccHHHHHHHHHHHhcCCcccccccCCCCCCCCCCeEEecccCHHHHhhcCCCcEEEEEecCcChhHHH
Confidence 45688888889999 9999999999999999999999999888899999999999999888999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCceEEEEEeCCCCCC-CCCCCcCCCeEEEEeCCCccCceEecCCCCHHHHHHHHHHHhcccCCCC
Q 023747 184 TSKQIEKLAKHFKGLDNLVIAKIDASANEH-PKLQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKEKDQSP 262 (278)
Q Consensus 184 ~~~~~~~~a~~~~~~~~~~~~~vd~~~~~~-~~~~i~~~Ptl~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~~~~~~~~ 262 (278)
+.|.|.++++.+++..++.++.+|++.+++ .+|+|.++||+++|++|+.+.+++|.|.++.++|.+||++++.......
T Consensus 388 ~~p~~~~l~~~~~~~~~v~~~~id~~~~~~~~~~~v~~~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~~~~~~~~~ 467 (481)
T 3f8u_A 388 LEPKYKELGEKLSKDPNIVIAKMDATANDVPSPYEVRGFPTIYFSPANKKLNPKKYEGGRELSDFISYLQREATNPPVIQ 467 (481)
T ss_dssp HHHHHHHHHHHTTTCSSEEEEEEETTSSCCCTTCCCCSSSEEEEECTTCTTSCEECCSCCSHHHHHHHHHHHCSSCCCCC
T ss_pred hhHHHHHHHHHhccCCCEEEEEEECCchhhHhhCCCcccCEEEEEeCCCeEeeeEeCCCCCHHHHHHHHHHhcCCccccc
Confidence 999999999999876579999999999987 4899999999999999987656789999999999999999987654321
Q ss_pred chhhhhhhccCCCCCC
Q 023747 263 KDEQWKEKDQAPKDEL 278 (278)
Q Consensus 263 ~~~~~~~~~~~~~~~~ 278 (278)
...++..++.+++|
T Consensus 468 --~~~~~~~~~~~~dl 481 (481)
T 3f8u_A 468 --EEKPKKKKKAQEDL 481 (481)
T ss_dssp --CC------------
T ss_pred --chhhhhhhhccccC
Confidence 22223345556654
No 4
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.97 E-value=1.3e-30 Score=240.38 Aligned_cols=224 Identities=25% Similarity=0.432 Sum_probs=194.7
Q ss_pred eeeecCCceEEEEEeCccchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCC-CCCCceEEEEecCCcceee
Q 023747 32 KVSQIDTLDMVYVFAKADDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGL-EESKNTVVTAFDNKAISKF 110 (278)
Q Consensus 32 ~~~~~~~~~~v~F~~~~~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i-~~~~Ptl~~~~~~~~~~~~ 110 (278)
.+...+.+++++|+.....-+.+.+.|.++|+++++++.|+.+|+... +.+++.||+ ..+ |++ .+++.....+|
T Consensus 233 ~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~a~~~~~~i~F~~id~~~~---~~~~~~~gl~~~~-P~v-~i~~~~~~~ky 307 (504)
T 2b5e_A 233 QYVESGLPLGYLFYNDEEELEEYKPLFTELAKKNRGLMNFVSIDARKF---GRHAGNLNMKEQF-PLF-AIHDMTEDLKY 307 (504)
T ss_dssp HHHHTTSCEEEEEESSHHHHHHHHHHHHHHHHHTTTTCEEEEEEHHHH---TTHHHHTTCCSCS-SEE-EEEETTTTEEE
T ss_pred HHhcCCCcEEEEEecCcccHHHHHHHHHHHHHhcCCeeEEEEEehhhh---HHHHHHcCCcccC-CEE-EEEeCCcCccc
Confidence 445677778888887663337899999999999999999999999988 789999999 236 999 88877656678
Q ss_pred cCC--CC-----------CChHHHHHHHHHHhcCcccccccCCCCCCCCCCCeEEEcccchHHHhhcCCCcEEEEEECCC
Q 023747 111 LLE--SD-----------LTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIVVGKTFDDLVLNSHKDVLLEVYTPW 177 (278)
Q Consensus 111 ~~~--g~-----------~~~~~i~~fi~~~~~~~~~~~~~s~~~p~~~~~~v~~l~~~~~~~~i~~~~~~~~v~f~~~~ 177 (278)
.+. +. .+.+.|.+|+.+++.|+..+..+|+++|....+.|..+++++|++.+.+.+++++|.|||+|
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~~~~g~~~p~~~s~~~p~~~~~~v~~l~~~~f~~~v~~~~k~vlv~F~a~w 387 (504)
T 2b5e_A 308 GLPQLSEEAFDELSDKIVLESKAIESLVKDFLKGDASPIVKSQEIFENQDSSVFQLVGKNHDEIVNDPKKDVLVLYYAPW 387 (504)
T ss_dssp ECCCCCHHHHHTCCSCCCCCHHHHHHHHHHHHHTCCCCCCCCCCCCCCCSCSEEEECTTTHHHHHHCTTCCEEEEEECTT
T ss_pred CCCCCccchhhccccccccCHHHHHHHHHHHHcCCCChhhhcCCCCccccccceecccccHHHhhccCCCCEEEEEECCC
Confidence 776 55 88999999999999999999999999998777889999999999999888999999999999
Q ss_pred ChhHHHHHHHHHHHHHHhc-CCCceEEEEEeCCCCCCCCCCCcCCCeEEEEeCCCccCceEecCCCCHHHHHHHHHHHhc
Q 023747 178 CVTCETTSKQIEKLAKHFK-GLDNLVIAKIDASANEHPKLQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLK 256 (278)
Q Consensus 178 c~~c~~~~~~~~~~a~~~~-~~~~~~~~~vd~~~~~~~~~~i~~~Ptl~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~~ 256 (278)
|++|+.+.|.|.+++..+. +..++.++.+|++.++...++|.++||+++|++|+......|.|.++.++|.+||++++.
T Consensus 388 C~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~~~G~~~~~~l~~~i~~~~~ 467 (504)
T 2b5e_A 388 CGHCKRLAPTYQELADTYANATSDVLIAKLDHTENDVRGVVIEGYPTIVLYPGGKKSESVVYQGSRSLDSLFDFIKENGH 467 (504)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGGGCCCSSCCCSSSSEEEEECCTTSCCCCBCCSCCCHHHHHHHHHHHCT
T ss_pred ChhHHHHhHHHHHHHHHhhccCCcEEEEEecCCccccccCCceecCeEEEEeCCceecceEecCCCCHHHHHHHHHhcCC
Confidence 9999999999999999987 333699999999988665599999999999998876445589999999999999999987
Q ss_pred ccCC
Q 023747 257 EKDQ 260 (278)
Q Consensus 257 ~~~~ 260 (278)
....
T Consensus 468 ~~~~ 471 (504)
T 2b5e_A 468 FDVD 471 (504)
T ss_dssp TCCC
T ss_pred CCCC
Confidence 6543
No 5
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.97 E-value=3.9e-30 Score=248.69 Aligned_cols=225 Identities=20% Similarity=0.300 Sum_probs=187.8
Q ss_pred HHHHHHhccCCcccccccCCCCceeeeeeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccch
Q 023747 5 LLKQATLRLPKSCTLISNLPTTSLELLKVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAK 83 (278)
Q Consensus 5 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~ 83 (278)
|..++...+. .+++.+++++++.++...+.+.+++|.||++| ++|+++.|.|+++|+.+++++.|+.+||+.+ .
T Consensus 533 l~~fi~~~~~--~~v~~l~~~~f~~~v~~~~~~~~~lv~F~ap~C~~c~~~~p~~~~lA~~~~~~v~~~~vd~~~~---~ 607 (780)
T 3apo_A 533 ILEFIEDLRN--PSVVSLTPSTFNELVKQRKHDEVWMVDFYSPWSHPSQVLMPEWKRMARTLTGLINVGSVDCGQY---H 607 (780)
T ss_dssp HHHHHHHHHS--CSEEECCHHHHHHHTTTCCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEETTTT---H
T ss_pred HHHHHHhhcc--cceeecCcccHHHHhhccCCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCCeEEEEEECcch---H
Confidence 3444444433 23555666666666554445678999999999 9999999999999999999999999999998 8
Q ss_pred hHHHHcCCCCCCceEEEEecCCcc---eeecCCC-CCChHHHHHHHHHHhcCcccccccCCCCCCCCCCCeEEEcccchH
Q 023747 84 PFLTLFGLEESKNTVVTAFDNKAI---SKFLLES-DLTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIVVGKTFD 159 (278)
Q Consensus 84 ~l~~~~~i~~~~Ptl~~~~~~~~~---~~~~~~g-~~~~~~i~~fi~~~~~~~~~~~~~s~~~p~~~~~~v~~l~~~~~~ 159 (278)
.+|++|+|.++ ||| .++..+.. ....|.| .++.++|.+|+.+... ..+..++.++|.
T Consensus 608 ~l~~~~~v~~~-Pti-~~~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~-----------------~~v~~l~~~~~~ 668 (780)
T 3apo_A 608 SFCTQENVQRY-PEI-RFYPQKSSKAYQYHSYNGWNRDAYSLRSWGLGFLP-----------------QASIDLTPQTFN 668 (780)
T ss_dssp HHHHHTTCCSS-SEE-EEECCCSSSCCSCEECCCSCCSHHHHHHHHHTTSC-----------------CCSEEECHHHHH
T ss_pred HHHHHcCCCCC-CeE-EEEcCCCcCccchhhcCCCCCCHHHHHHHHhhhcc-----------------cccccCCHHHHH
Confidence 99999999999 999 77766543 2345789 8999999999998642 247889999999
Q ss_pred HHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcCCCeEEEEeCCCccCceE
Q 023747 160 DLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTLLFYPAGDKANPIK 237 (278)
Q Consensus 160 ~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~~Ptl~~f~~g~~~~~~~ 237 (278)
+.+...+++++|.||++||++|+.+.|.++++++.+++ ++.|+.||++.+ ++ .+|+|.++|++++|++|+.+. +
T Consensus 669 ~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~la~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~--~ 744 (780)
T 3apo_A 669 EKVLQGKTHWVVDFYAPWSGPSQNFAPEFELLARMIKG--KVRAGKVDCQAYPQTCQKAGIKAYPSVKLYQYERAKK--S 744 (780)
T ss_dssp HHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT--TCEEEEEETTTCHHHHHHTTCCSSSEEEEEEEETTTT--E
T ss_pred HHHhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC--CceEEEEECCCCHHHHHhcCCCcCCEEEEEcCCCccc--c
Confidence 88878889999999999999999999999999999987 799999999988 55 589999999999999888765 4
Q ss_pred ecC----CCCHHHHHHHHHHHhcc
Q 023747 238 VSA----RSSSKNIAAFIKEQLKE 257 (278)
Q Consensus 238 ~~g----~~~~~~l~~~i~~~~~~ 257 (278)
+.| ..+.+.|.+||.+++..
T Consensus 745 ~~G~~~g~~~~~~l~~~l~~~l~~ 768 (780)
T 3apo_A 745 IWEEQINSRDAKTIAALIYGKLET 768 (780)
T ss_dssp EEEEEECCCCHHHHHHHHHHHTTC
T ss_pred ccCcccCCcCHHHHHHHHHHHHHH
Confidence 555 68999999999999853
No 6
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.97 E-value=4.6e-30 Score=212.50 Aligned_cols=195 Identities=13% Similarity=0.184 Sum_probs=160.4
Q ss_pred CCceEEEEEeC-c-cchHHHHHHHHHHHHHhcCceEEEEEeCCC--cccchhHHHHcCCCCCCceEEEEecCCcceeecC
Q 023747 37 DTLDMVYVFAK-A-DDLKSLLEPLEDIARNFKGKIMFTAVDIAD--EDLAKPFLTLFGLEESKNTVVTAFDNKAISKFLL 112 (278)
Q Consensus 37 ~~~~~v~F~~~-~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~--~~~~~~l~~~~~i~~~~Ptl~~~~~~~~~~~~~~ 112 (278)
..+++++||++ | ++|+.+.|.|+++++. .+++.|+.+||+. + +++|++|||.++ ||+ .++.++......|
T Consensus 22 ~~v~lv~f~~~~~C~~C~~~~~~~~~la~~-~~~v~~~~vd~~~~~~---~~~~~~~~v~~~-Pt~-~~~~~g~~~~~~~ 95 (226)
T 1a8l_A 22 NPVKLIVFVRKDHCQYCDQLKQLVQELSEL-TDKLSYEIVDFDTPEG---KELAKRYRIDRA-PAT-TITQDGKDFGVRY 95 (226)
T ss_dssp SCEEEEEEECSSSCTTHHHHHHHHHHHHTT-CTTEEEEEEETTSHHH---HHHHHHTTCCSS-SEE-EEEETTBCCSEEE
T ss_pred CCeEEEEEecCCCCchhHHHHHHHHHHHhh-CCceEEEEEeCCCccc---HHHHHHcCCCcC-ceE-EEEcCCceeeEEE
Confidence 34567999999 9 9999999999999965 5679999999998 7 899999999999 999 6665554333445
Q ss_pred CCCCChHHHHHHHHHHhcCcccccccCCCCCCCCCCCeEEEcccchHHHhhcCCCcE-EEEEECCCChhHHHHHHHHHHH
Q 023747 113 ESDLTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIVVGKTFDDLVLNSHKDV-LLEVYTPWCVTCETTSKQIEKL 191 (278)
Q Consensus 113 ~g~~~~~~i~~fi~~~~~~~~~~~~~s~~~p~~~~~~v~~l~~~~~~~~i~~~~~~~-~v~f~~~~c~~c~~~~~~~~~~ 191 (278)
.|..+.+++.+|+...+... +.+..++.++++.+. ..++.+ +|.||++||++|+.+.|.+.++
T Consensus 96 ~G~~~~~~l~~~l~~~l~~~---------------~~~~~l~~~~~~~~~-~~~~~~~~v~F~a~wC~~C~~~~p~~~~l 159 (226)
T 1a8l_A 96 FGLPAGHEFAAFLEDIVDVS---------------REETNLMDETKQAIR-NIDQDVRILVFVTPTCPYCPLAVRMAHKF 159 (226)
T ss_dssp ESCCCTTHHHHHHHHHHHHH---------------HTCCCCCHHHHHHHT-TCCSCEEEEEEECSSCTTHHHHHHHHHHH
T ss_pred eccCcHHHHHHHHHHHHhhc---------------CCCCCCCHHHHHHHH-hcCCCcEEEEEeCCCCCccHHHHHHHHHH
Confidence 78888899999999876421 123456777887764 445555 9999999999999999999999
Q ss_pred HHHhcC--CCceEEEEEeCCCC-CC-CCCCCcCCCeEEEEeCCCccCceEecCCCCHHHHHHHHHHHh
Q 023747 192 AKHFKG--LDNLVIAKIDASAN-EH-PKLQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQL 255 (278)
Q Consensus 192 a~~~~~--~~~~~~~~vd~~~~-~~-~~~~i~~~Ptl~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~ 255 (278)
+..+.+ ..++.++.+|++.+ ++ .+|+|.++||+++|++|+... ++.|..+.+.|.+||++.+
T Consensus 160 ~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~--~~~G~~~~~~l~~~l~~~l 225 (226)
T 1a8l_A 160 AIENTKAGKGKILGDMVEAIEYPEWADQYNVMAVPKIVIQVNGEDRV--EFEGAYPEKMFLEKLLSAL 225 (226)
T ss_dssp HHHHHHTTCCCEEEEEEEGGGCHHHHHHTTCCSSCEEEEEETTEEEE--EEESCCCHHHHHHHHHHHH
T ss_pred HHhcccccCCcEEEEEEEcccCHHHHHhCCCcccCeEEEEeCCceeE--EEcCCCCHHHHHHHHHHhh
Confidence 999971 12699999999988 55 589999999999999887643 7999999999999999876
No 7
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.97 E-value=3.7e-29 Score=241.88 Aligned_cols=209 Identities=16% Similarity=0.277 Sum_probs=182.8
Q ss_pred ccccCCCCceeeeeeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCce
Q 023747 19 LISNLPTTSLELLKVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNT 97 (278)
Q Consensus 19 ~v~~~~~~~~~~~~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Pt 97 (278)
++.++++++... .+++++|.||++| ++|+.+.|.|+++|+++++++.|+.|||++. +.+|+.|||.++ ||
T Consensus 442 v~~l~~~~~~~~-----~~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~~v~~~~vd~~~~---~~~~~~~~v~~~-Pt 512 (780)
T 3apo_A 442 VTTLGPQNFPAS-----DKEPWLVDFFAPWSPPSRALLPELRKASTLLYGQLKVGTLDCTIH---EGLCNMYNIQAY-PT 512 (780)
T ss_dssp EEECCTTTSCTT-----CCSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTC---HHHHHHTTCCSS-SE
T ss_pred CEecCHHHHHHc-----CCCeEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEeCCCC---HHHHHHcCCCcC-Ce
Confidence 566777776554 6678999999999 9999999999999999999999999999998 899999999999 99
Q ss_pred EEEEecCCcceeecCCCCCChHHHHHHHHHHhcCcccccccCCCCCCCCCCCeEEEcccchHHHhhcC--CCcEEEEEEC
Q 023747 98 VVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIVVGKTFDDLVLNS--HKDVLLEVYT 175 (278)
Q Consensus 98 l~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~~~~~~~~s~~~p~~~~~~v~~l~~~~~~~~i~~~--~~~~~v~f~~ 175 (278)
+ .+++++. .+.|.|.++.++|.+|+++.++. .|..++.++|++++... +..++|.||+
T Consensus 513 ~-~~~~~g~--~~~~~g~~~~~~l~~fi~~~~~~-----------------~v~~l~~~~f~~~v~~~~~~~~~lv~F~a 572 (780)
T 3apo_A 513 T-VVFNQSS--IHEYEGHHSAEQILEFIEDLRNP-----------------SVVSLTPSTFNELVKQRKHDEVWMVDFYS 572 (780)
T ss_dssp E-EEEETTE--EEEECSCSCHHHHHHHHHHHHSC-----------------SEEECCHHHHHHHTTTCCTTCCEEEEEEC
T ss_pred E-EEEcCCc--eeeecCcccHHHHHHHHHhhccc-----------------ceeecCcccHHHHhhccCCCCeEEEEEEC
Confidence 9 6666543 46778999999999999998742 48889999999998664 4678999999
Q ss_pred CCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcCCCeEEEEeCCCcc--CceEecC-CCCHHHHHHH
Q 023747 176 PWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTLLFYPAGDKA--NPIKVSA-RSSSKNIAAF 250 (278)
Q Consensus 176 ~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~~Ptl~~f~~g~~~--~~~~~~g-~~~~~~l~~~ 250 (278)
|||++|+.+.|.|+++|+.+++ ++.|+.+||+.+ .+ .+++|.++|++++|+.|... .++.|.| .++.++|.+|
T Consensus 573 p~C~~c~~~~p~~~~lA~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pti~~~~~~~~~~~~~~~y~g~~~~~~~l~~f 650 (780)
T 3apo_A 573 PWSHPSQVLMPEWKRMARTLTG--LINVGSVDCGQYHSFCTQENVQRYPEIRFYPQKSSKAYQYHSYNGWNRDAYSLRSW 650 (780)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTT--TSEEEEEETTTTHHHHHHTTCCSSSEEEEECCCSSSCCSCEECCCSCCSHHHHHHH
T ss_pred CCCHHHHHhhHHHHHHHHHhhC--CeEEEEEECcchHHHHHHcCCCCCCeEEEEcCCCcCccchhhcCCCCCCHHHHHHH
Confidence 9999999999999999999997 799999999988 44 58999999999999887642 3567999 8999999999
Q ss_pred HHHHhccc
Q 023747 251 IKEQLKEK 258 (278)
Q Consensus 251 i~~~~~~~ 258 (278)
|.+.+.+.
T Consensus 651 i~~~~~~~ 658 (780)
T 3apo_A 651 GLGFLPQA 658 (780)
T ss_dssp HHTTSCCC
T ss_pred Hhhhcccc
Confidence 99988653
No 8
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.96 E-value=7.5e-29 Score=205.76 Aligned_cols=193 Identities=13% Similarity=0.136 Sum_probs=160.1
Q ss_pred cCCceEEEEE-----eCc-cchHHHHHHHHHHHHHh--cCceEEEEEeCCCcccchhHHHHcCCCCCCceEEEEecCCcc
Q 023747 36 IDTLDMVYVF-----AKA-DDLKSLLEPLEDIARNF--KGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFDNKAI 107 (278)
Q Consensus 36 ~~~~~~v~F~-----~~~-~~c~~~~~~~~~la~~~--~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Ptl~~~~~~~~~ 107 (278)
...+++|.|| ++| ++|+.+.|.|.++|..+ .+++.|+++||+.+ +++|++|||.++ ||+ .++.++ .
T Consensus 19 ~~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~~---~~l~~~~~v~~~-Ptl-~~~~~~-~ 92 (229)
T 2ywm_A 19 FKEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPFTH---KEETEKYGVDRV-PTI-VIEGDK-D 92 (229)
T ss_dssp CCSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTTTC---HHHHHHTTCCBS-SEE-EEESSS-C
T ss_pred ccCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCccc---HHHHHHcCCCcC-cEE-EEECCC-c
Confidence 4456666666 788 99999999999999998 67899999999998 999999999999 999 777643 3
Q ss_pred eeecCCCCCChHHHHHHHHHHhcCcccccccCCCCCCCCCCCeEEEcccchHHHhhcCCCcEEEEEECCCChhHHHHHHH
Q 023747 108 SKFLLESDLTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQ 187 (278)
Q Consensus 108 ~~~~~~g~~~~~~i~~fi~~~~~~~~~~~~~s~~~p~~~~~~v~~l~~~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~ 187 (278)
....|.|.++.+++.+|+...+.. .+.+..++.++|+.++...+..++|.||++||++|+.+.|.
T Consensus 93 ~~~~~~G~~~~~~l~~~~~~~~~~---------------~~~~~~l~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~~~ 157 (229)
T 2ywm_A 93 YGIRYIGLPAGLEFTTLINGIFHV---------------SQRKPQLSEKTLELLQVVDIPIEIWVFVTTSCGYCPSAAVM 157 (229)
T ss_dssp CCEEEESCCCTTHHHHHHHHHHHH---------------HTTCCSCCHHHHHHHTTCCSCEEEEEEECTTCTTHHHHHHH
T ss_pred ccceecCCccHHHHHHHHHHHHhc---------------cCCccCCCHHHHHHHHhcCCCeEEEEEECCCCcchHHHHHH
Confidence 345568999999999999987631 11245677888988763333444889999999999999999
Q ss_pred HHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcCCCeEEEEeCCCccCceEecCCCCHHHHHHHHHHHhcc
Q 023747 188 IEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKE 257 (278)
Q Consensus 188 ~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~~Ptl~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~~~ 257 (278)
+++++..+. ++.++.+|++.+ ++ .+|+|.++|++++ +|+ + .++.|..+.+.|.+||++.++.
T Consensus 158 ~~~~~~~~~---~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~--~G~-~--~~~~G~~~~~~l~~~l~~~~~~ 221 (229)
T 2ywm_A 158 AWDFALAND---YITSKVIDASENQDLAEQFQVVGVPKIVI--NKG-V--AEFVGAQPENAFLGYIMAVYEK 221 (229)
T ss_dssp HHHHHHHCT---TEEEEEEEGGGCHHHHHHTTCCSSSEEEE--GGG-T--EEEESCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHCC---CeEEEEEECCCCHHHHHHcCCcccCEEEE--CCE-E--EEeeCCCCHHHHHHHHHHHhhh
Confidence 999999983 699999999988 56 5899999999998 665 3 3699999999999999998863
No 9
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.94 E-value=1.7e-25 Score=187.24 Aligned_cols=194 Identities=13% Similarity=0.126 Sum_probs=154.5
Q ss_pred CCceEEEEEeCc---cchHHHHHHHHHHHHH---hcCc--eEEEEEeCCCcccchhHHHHcCCCCCCceEEEEecCCcce
Q 023747 37 DTLDMVYVFAKA---DDLKSLLEPLEDIARN---FKGK--IMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFDNKAIS 108 (278)
Q Consensus 37 ~~~~~v~F~~~~---~~c~~~~~~~~~la~~---~~~~--v~f~~vd~~~~~~~~~l~~~~~i~~~~Ptl~~~~~~~~~~ 108 (278)
.++++|.||.+| ++|+.+.+.++++|+. ++|+ +.|+.+|++++ +++|++|||.++ ||+ .+++ + ..
T Consensus 25 ~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~~---~~~~~~~gv~~~-Pt~-~i~~-g-~~ 97 (243)
T 2hls_A 25 VNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRESD---SDKFSEFKVERV-PTV-AFLG-G-EV 97 (243)
T ss_dssp CSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTTT---HHHHHHTTCCSS-SEE-EETT-T-TE
T ss_pred CCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCcC---HHHHHhcCCCcC-CEE-EEEC-C-ce
Confidence 467899999887 7899999999999998 4555 99999999998 899999999999 999 7774 3 44
Q ss_pred eecCCCCCChHHHHHHHHHHhcCcccccccCCCCCCCCCCCeEEEcccchHHHhhcCCCcEEEEEECCCChhHHHHHHHH
Q 023747 109 KFLLESDLTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQI 188 (278)
Q Consensus 109 ~~~~~g~~~~~~i~~fi~~~~~~~~~~~~~s~~~p~~~~~~v~~l~~~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~ 188 (278)
+| .|..+.+++..|+...+...-.+ ..++.++++.+....++.+++.||+|||++|+.+.|.|
T Consensus 98 ~~--~G~~~~~~l~~fv~~~l~~~~~~---------------~~l~~~~~~~~~~~~~~~~vv~F~a~wC~~C~~~~p~l 160 (243)
T 2hls_A 98 RW--TGIPAGEEIRALVEVIMRLSEDE---------------SGLEDATKEALKSLKGRVHIETIITPSCPYCPYAVLLA 160 (243)
T ss_dssp EE--ESCCCTTHHHHHHHHHHHHHTTC---------------CCCCHHHHHHHHHCCSCEEEEEEECSSCSSHHHHHHHH
T ss_pred eE--cCCCcHHHHHHHHHHHHhccCCC---------------CCCCHHHHHHHHHcCCCcEEEEEECCCCCCcHHHHHHH
Confidence 54 67778889999998876422111 11233444443223356778999999999999999999
Q ss_pred HHHHHHhc--CCCceEEEEEeCCCC-CC-CCCCCcCCCeEEEEeCCCccCceEecCCCCHHHHHHHHHHHhcccCC
Q 023747 189 EKLAKHFK--GLDNLVIAKIDASAN-EH-PKLQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKEKDQ 260 (278)
Q Consensus 189 ~~~a~~~~--~~~~~~~~~vd~~~~-~~-~~~~i~~~Ptl~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~~~~~~ 260 (278)
++++..+. +.+++.++.+|++.+ ++ .+|+|.++||+++ +|+ +.|.|.++.++|.+||.+.++++..
T Consensus 161 ~~la~~~~~~~~~~v~~~~vd~~~~~~~~~~~~V~~vPt~~i--~G~----~~~~G~~~~~~l~~~l~~~~~~~~~ 230 (243)
T 2hls_A 161 HMFAYEAWKQGNPVILSEAVEAYENPDIADKYGVMSVPSIAI--NGY----LVFVGVPYEEDFLDYVKSAAEGRLT 230 (243)
T ss_dssp HHHHHHHHHTTCCCEEEEEEETTTCHHHHHHTTCCSSSEEEE--TTE----EEEESCCCHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHcccccCCcEEEEEEECccCHHHHHHcCCeeeCeEEE--CCE----EEEeCCCCHHHHHHHHHHHhhcccc
Confidence 99999983 222699999999988 55 5899999999988 554 2599999999999999999987543
No 10
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.91 E-value=2.1e-23 Score=184.74 Aligned_cols=206 Identities=17% Similarity=0.224 Sum_probs=165.6
Q ss_pred cccccCCCCceeeeeeeecCCceEEEEEeCc-cchHH---HH---HHHHHHHHHhcCc-eEEEEEeCCCcccchhHHHHc
Q 023747 18 TLISNLPTTSLELLKVSQIDTLDMVYVFAKA-DDLKS---LL---EPLEDIARNFKGK-IMFTAVDIADEDLAKPFLTLF 89 (278)
Q Consensus 18 ~~v~~~~~~~~~~~~~~~~~~~~~v~F~~~~-~~c~~---~~---~~~~~la~~~~~~-v~f~~vd~~~~~~~~~l~~~~ 89 (278)
.|+.++++|+...+ +.+.+++|.||++| ++|.. +. |.|+++|..+++. +.|++|||+.+ +.+|++|
T Consensus 14 ~v~~lt~~~f~~~i---~~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~~---~~l~~~~ 87 (367)
T 3us3_A 14 RVINVNAKNYKNVF---KKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKD---AAVAKKL 87 (367)
T ss_dssp CCEECCTTTHHHHH---HHCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTTT---HHHHHHH
T ss_pred ccEECCHHHHHHHH---hhCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCccc---HHHHHHc
Confidence 46778888887655 56789999999999 78632 23 6899999999874 99999999999 9999999
Q ss_pred CCCCCCceEEEEecCCcceeecCCCCCChHHHHHHHHHHhcCcccccccCCCCCCCCCCCeEEEc-ccchHHHhhcCCCc
Q 023747 90 GLEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIVV-GKTFDDLVLNSHKD 168 (278)
Q Consensus 90 ~i~~~~Ptl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~~~~~~~~s~~~p~~~~~~v~~l~-~~~~~~~i~~~~~~ 168 (278)
||.++ ||+ .+|.+|. ...|.|.++.+.|.+|+.+.+.. .+..++ .+++.+++...++.
T Consensus 88 ~V~~~-PTl-~~f~~G~--~~~y~G~~~~~~i~~~i~~~~~~-----------------~v~~i~~~~~~~~~~~~~~~~ 146 (367)
T 3us3_A 88 GLTEE-DSI-YVFKEDE--VIEYDGEFSADTLVEFLLDVLED-----------------PVELIEGERELQAFENIEDEI 146 (367)
T ss_dssp TCCST-TEE-EEEETTE--EEECCSCCSHHHHHHHHHHHHSC-----------------SEEECCSHHHHHHHHHCCSSC
T ss_pred CCCcC-ceE-EEEECCc--EEEeCCCCCHHHHHHHHHHhcCC-----------------CcEEcCCHHHHHHHhccCCCc
Confidence 99999 999 6676554 34679999999999999997632 366775 47888887535688
Q ss_pred EEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCC-CCCCCcCCCeEEEEeCCCccCceEecCC-CCHHH
Q 023747 169 VLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASANEH-PKLQVEEYPTLLFYPAGDKANPIKVSAR-SSSKN 246 (278)
Q Consensus 169 ~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~~~-~~~~i~~~Ptl~~f~~g~~~~~~~~~g~-~~~~~ 246 (278)
++|.|+++||+. ..+.|.++|..+++ ++.|+.++.. ++ .+++++. |++++|+.+... ++.|.|. ++.++
T Consensus 147 ~vv~ff~~~~~~---~~~~f~~~A~~~~~--~~~F~~~~~~--~~~~~~~v~~-p~i~lf~~~~~~-~~~y~g~~~~~~~ 217 (367)
T 3us3_A 147 KLIGYFKNKDSE---HYKAFKEAAEEFHP--YIPFFATFDS--KVAKKLTLKL-NEIDFYEAFMEE-PVTIPDKPNSEEE 217 (367)
T ss_dssp EEEEECSCTTCH---HHHHHHHHHHHHTT--TSCEEEECCH--HHHHHHTCCT-TCEEEECTTCSS-CEECSSSSCCHHH
T ss_pred EEEEEECCCCch---HHHHHHHHHHhhcC--CcEEEEECCH--HHHHHcCCCC-CeEEEEcCCCCC-CeecCCCCCCHHH
Confidence 999999998764 46789999999987 6888887532 34 4778874 999999886443 6689995 99999
Q ss_pred HHHHHHHHhcccC
Q 023747 247 IAAFIKEQLKEKD 259 (278)
Q Consensus 247 l~~~i~~~~~~~~ 259 (278)
|.+||+.+.-+..
T Consensus 218 l~~fi~~~~~p~v 230 (367)
T 3us3_A 218 IVNFVEEHRRSTL 230 (367)
T ss_dssp HHHHHHHTCSCSE
T ss_pred HHHHHHHcCccce
Confidence 9999999886643
No 11
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.91 E-value=7.7e-23 Score=182.14 Aligned_cols=209 Identities=11% Similarity=0.124 Sum_probs=149.3
Q ss_pred cccccccCCCCceeeeeeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHh------cCceEEEEEeCCCcccchhHHHH
Q 023747 16 SCTLISNLPTTSLELLKVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNF------KGKIMFTAVDIADEDLAKPFLTL 88 (278)
Q Consensus 16 ~~~~v~~~~~~~~~~~~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~------~~~v~f~~vd~~~~~~~~~l~~~ 88 (278)
...++.++.+++...+ ..+++++|.||++| ++|+.+.|.|+++|..+ .+.+.|+.|||+.+ ..+|++
T Consensus 4 ~~~v~~l~~~~f~~~~---~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~---~~l~~~ 77 (382)
T 2r2j_A 4 GSEITSLDTENIDEIL---NNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQH---SDIAQR 77 (382)
T ss_dssp ----CBCCTTTHHHHH---HHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTC---HHHHHH
T ss_pred CCceEECCHHHHHHHH---hcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCcc---HHHHHh
Confidence 3346778888876543 46789999999999 99999999999999999 45699999999999 899999
Q ss_pred cCCCCCCceEEEEecCCcceeecCCCCCChHHHHHHHHHHhcCcccccccCCCCCCCCCCCeEEEcc-cchHHHhhcCCC
Q 023747 89 FGLEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIVVG-KTFDDLVLNSHK 167 (278)
Q Consensus 89 ~~i~~~~Ptl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~~~~~~~~s~~~p~~~~~~v~~l~~-~~~~~~i~~~~~ 167 (278)
|+|.++ ||+ .+|.+|......|.|.++.+.|.+|+.+.+.. .+..+++ .++.+ + ..++
T Consensus 78 ~~v~~~-Pt~-~~f~~G~~~~~~~~G~~~~~~l~~~i~~~~~~-----------------~v~~l~~~~~l~~-l-~~~~ 136 (382)
T 2r2j_A 78 YRISKY-PTL-KLFRNGMMMKREYRGQRSVKALADYIRQQKSD-----------------PIQEIRDLAEITT-L-DRSK 136 (382)
T ss_dssp TTCCEE-SEE-EEEETTEEEEEECCSCCSHHHHHHHHHHHHSC-----------------CCEEC--------------C
T ss_pred cCCCcC-CEE-EEEeCCcEeeeeecCcchHHHHHHHHHHhccC-----------------CceecCCHHHHHH-h-cCCC
Confidence 999999 999 66766543332579999999999999998743 2445543 45666 3 5567
Q ss_pred cEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCCCCCCCcCCCeEEEEeCCCccCceEecCCC-CHHH
Q 023747 168 DVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASANEHPKLQVEEYPTLLFYPAGDKANPIKVSARS-SSKN 246 (278)
Q Consensus 168 ~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~~~~~~~i~~~Ptl~~f~~g~~~~~~~~~g~~-~~~~ 246 (278)
.++|.|+++++.++ .+.|.++|..+++ ++.|+....+ -...+++++.| +++++.+....++.|.|.+ +.++
T Consensus 137 ~~~v~ff~~~~~~~---~~~f~~~A~~~~~--~~~F~~~~~~--~~~~~~v~~~p-i~~~~~~~~~~~~~y~g~~~~~~~ 208 (382)
T 2r2j_A 137 RNIIGYFEQKDSDN---YRVFERVANILHD--DCAFLSAFGD--VSKPERYSGDN-IIYKPPGHSAPDMVYLGAMTNFDV 208 (382)
T ss_dssp CEEEEEESCSSSHH---HHHHHHHHHHHTT--TCEEEEEESC--C--------CE-EEEECSSSSSCCEECCSCTTCHHH
T ss_pred CEEEEEECCCCChh---HHHHHHHHHHhhc--cceEEEEehh--hHHhhCCCCCc-eEECCCCCCCcCcccCCCCCCHHH
Confidence 88999999887654 5679999999987 6778777752 22467888999 6666554333356899998 9999
Q ss_pred HHHHHHHHhcccC
Q 023747 247 IAAFIKEQLKEKD 259 (278)
Q Consensus 247 l~~~i~~~~~~~~ 259 (278)
|.+||+++..+..
T Consensus 209 l~~fi~~~~~p~v 221 (382)
T 2r2j_A 209 TYNWIQDKCVPLV 221 (382)
T ss_dssp HHHHHHHHHSCSS
T ss_pred HHHHHHhcccCce
Confidence 9999999876654
No 12
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.90 E-value=2.3e-23 Score=183.49 Aligned_cols=203 Identities=16% Similarity=0.226 Sum_probs=162.8
Q ss_pred ccccCCCCceeeeeeeecCCceEEEEEeCc-cchHHHHHH-------HHHHHHHhcC-ceEEEEEeCCCcccchhHHHHc
Q 023747 19 LISNLPTTSLELLKVSQIDTLDMVYVFAKA-DDLKSLLEP-------LEDIARNFKG-KIMFTAVDIADEDLAKPFLTLF 89 (278)
Q Consensus 19 ~v~~~~~~~~~~~~~~~~~~~~~v~F~~~~-~~c~~~~~~-------~~~la~~~~~-~v~f~~vd~~~~~~~~~l~~~~ 89 (278)
++.++.+++... .+.+++++|.||++| + |+.+.|. |+++|+.+++ .+.|+.|||+.+ +.+|++|
T Consensus 13 v~~l~~~~f~~~---i~~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~~---~~l~~~~ 85 (350)
T 1sji_A 13 VVSLTEKNFKQV---LKKYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKKE---AKLAKKL 85 (350)
T ss_dssp CEEECHHHHHHH---HTTCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTTT---HHHHHHH
T ss_pred cEECCHHHHHHH---HhhCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCCC---HHHHHhc
Confidence 566666666543 345789999999999 6 9888888 9999999987 499999999999 9999999
Q ss_pred CCCCCCceEEEEecCCcceeecCCCCCChHHHHHHHHHHhcCcccccccCCCCCCCCCCCeEEEc-ccchHHHhhcCCCc
Q 023747 90 GLEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIVV-GKTFDDLVLNSHKD 168 (278)
Q Consensus 90 ~i~~~~Ptl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~~~~~~~~s~~~p~~~~~~v~~l~-~~~~~~~i~~~~~~ 168 (278)
||.++ ||+ .++.+|. ...|.|.++.+.|.+|+.+.+.. .+..++ .+++++++...++.
T Consensus 86 ~v~~~-Pt~-~~~~~g~--~~~~~G~~~~~~l~~~i~~~~~~-----------------~~~~l~~~~~~~~~~~~~~~~ 144 (350)
T 1sji_A 86 GFDEE-GSL-YVLKGDR--TIEFDGEFAADVLVEFLLDLIED-----------------PVEIINSKLEVQAFERIEDQI 144 (350)
T ss_dssp TCCST-TEE-EEEETTE--EEEECSCCCHHHHHHHHHTTSSC-----------------SEEECCSHHHHHHHHHCCSSC
T ss_pred CCCcc-ceE-EEEECCc--EEEecCCCCHHHHHHHHHHhcCC-----------------cceeccchHHHHHHhccCCCc
Confidence 99999 999 6666554 44669999999999999986531 366774 57888887414567
Q ss_pred EEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCC-CCCCCcCCCeEEEEeCCCccCceEecCC-CCHHH
Q 023747 169 VLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASANEH-PKLQVEEYPTLLFYPAGDKANPIKVSAR-SSSKN 246 (278)
Q Consensus 169 ~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~~~-~~~~i~~~Ptl~~f~~g~~~~~~~~~g~-~~~~~ 246 (278)
++|.|+++||..+ .+.|.++|..+++ ++.|+.++. .++ .++++. +|++++|+.+... ++.|.|. .+.++
T Consensus 145 ~vv~ff~~~~~~~---~~~~~~~A~~~~~--~~~f~~~~~--~~~~~~~~v~-~p~i~~~~~~~~~-~~~y~g~~~~~~~ 215 (350)
T 1sji_A 145 KLIGFFKSEESEY---YKAFEEAAEHFQP--YIKFFATFD--KGVAKKLSLK-MNEVDFYEPFMDE-PIAIPDKPYTEEE 215 (350)
T ss_dssp EEEEECSCTTSHH---HHHHHHHHHHTTT--TSEEEEECC--HHHHHHHTCC-TTCEEEECTTCSS-CEECSSSSCCHHH
T ss_pred EEEEEECCCCcHH---HHHHHHHHHhhcc--CcEEEEECC--HHHHHHcCCC-CCcEEEEeCCCCC-ceecCCCCCCHHH
Confidence 8999999987554 5789999999987 688988752 244 477888 9999999875443 5689997 99999
Q ss_pred HHHHHHHHhccc
Q 023747 247 IAAFIKEQLKEK 258 (278)
Q Consensus 247 l~~~i~~~~~~~ 258 (278)
|.+||+++.-+.
T Consensus 216 l~~fi~~~~~p~ 227 (350)
T 1sji_A 216 LVEFVKEHQRPT 227 (350)
T ss_dssp HHHHHHHHCCCS
T ss_pred HHHHHHHcCccc
Confidence 999999987654
No 13
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.90 E-value=1.2e-22 Score=174.79 Aligned_cols=216 Identities=13% Similarity=0.161 Sum_probs=165.4
Q ss_pred CCcccccccCCCCceeeeeeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCC
Q 023747 14 PKSCTLISNLPTTSLELLKVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLE 92 (278)
Q Consensus 14 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~ 92 (278)
+....++.++..++...+. +.+++++|.||++| ++|+.+.|.|.++++.+++.+.|+.|||+...+ ..+|++|+|.
T Consensus 14 ~~~~~vv~lt~~~f~~~i~--~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~d~~~~-~~l~~~~~I~ 90 (298)
T 3ed3_A 14 DSDPHISELTPKSFDKAIH--NTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNKN-KALCAKYDVN 90 (298)
T ss_dssp SSCTTCEECCHHHHHHHHT--SSSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTSTTT-HHHHHHTTCC
T ss_pred CCCCCeEEeCHHHHHHHHH--hCCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCCcEEEEEEccCccC-HHHHHhCCCC
Confidence 3444578888888776653 46778999999999 999999999999999999989999999984322 7999999999
Q ss_pred CCCceEEEEecCCc----------------ceeecCCCCCChHHHHHHHHHHhcCcccccccCCCCCCCCCCCeEEEc-c
Q 023747 93 ESKNTVVTAFDNKA----------------ISKFLLESDLTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIVV-G 155 (278)
Q Consensus 93 ~~~Ptl~~~~~~~~----------------~~~~~~~g~~~~~~i~~fi~~~~~~~~~~~~~s~~~p~~~~~~v~~l~-~ 155 (278)
++ ||+ .++..+. .....|.|.++.+.|.+|+.+.+. ..+..++ .
T Consensus 91 ~~-Pt~-~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~~-----------------~~v~~i~~~ 151 (298)
T 3ed3_A 91 GF-PTL-MVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRIR-----------------SYVKKFVRI 151 (298)
T ss_dssp BS-SEE-EEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHTTCC-----------------CCEEECSCG
T ss_pred cc-ceE-EEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHHhcc-----------------cccEEcCCH
Confidence 99 999 6665553 135667999999999999998652 2366674 4
Q ss_pred cchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC---CCCC-----C--------
Q 023747 156 KTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH---PKLQ-----V-------- 218 (278)
Q Consensus 156 ~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~---~~~~-----i-------- 218 (278)
+++++++...+++.++.|... ....+.|..+|..+.+ ++.|+.++..+- .. .+++ |
T Consensus 152 ~~l~~~l~~~~~~~vi~fs~~-----~~~~~~f~~~A~~~~~--~~~F~~v~~~~~a~~~~~~~~~~~~p~i~~~~~~~~ 224 (298)
T 3ed3_A 152 DTLGSLLRKSPKLSVVLFSKQ-----DKISPVYKSIALDWLG--KFDFYSISNKKLKQLTDMNPTYEKTPEIFKYLQKVI 224 (298)
T ss_dssp GGHHHHHTSCSSEEEEEEESS-----SSCCHHHHHHHHHTBT--TEEEEEEEGGGCCCCCTTCTTSTTCHHHHHHHHHHH
T ss_pred HHHHHHHhcCCceEEEEEcCC-----CcchHHHHHHHHHhhc--CcEEEEEcchHhhhhhhhhhhcccCcchhhhhhccc
Confidence 778888865556667766332 1335789999999988 799999985533 11 2332 3
Q ss_pred -----cCCCeEEEEeCCCccCceEecC-CCCHHHHHHHHHHHhcccC
Q 023747 219 -----EEYPTLLFYPAGDKANPIKVSA-RSSSKNIAAFIKEQLKEKD 259 (278)
Q Consensus 219 -----~~~Ptl~~f~~g~~~~~~~~~g-~~~~~~l~~~i~~~~~~~~ 259 (278)
...|+|++|+..... ++.|.| ..+.++|.+||.++.+..+
T Consensus 225 ~~~~~~~~P~lv~~~~~~~~-~~~y~g~~~~~~~i~~fi~~~~~~~p 270 (298)
T 3ed3_A 225 PEQRQSDKSKLVVFDADKDK-FWEYEGNSINKNDISKFLRDTFSITP 270 (298)
T ss_dssp HHHTTCSSCEEEEEETTTTE-EEECCCSSCCHHHHHHHHHHHHTCCC
T ss_pred ccccccCCCeEEEEcCCCCc-eEEeccccCCHHHHHHHHHhhcCCCC
Confidence 679999999875443 678995 6899999999997766433
No 14
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.87 E-value=1.5e-21 Score=178.81 Aligned_cols=209 Identities=13% Similarity=0.156 Sum_probs=165.1
Q ss_pred ccccCCCCceeeeeeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCce
Q 023747 19 LISNLPTTSLELLKVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNT 97 (278)
Q Consensus 19 ~v~~~~~~~~~~~~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Pt 97 (278)
|+.++.+++...+...+.+++++|.||++| ++|+.+.|.|+++|+.+++.+.|+.|||+.+ +.+|++|||.++ ||
T Consensus 3 v~~l~~~~f~~~i~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~v~~~~vd~~~~---~~l~~~~~v~~~-Pt 78 (481)
T 3f8u_A 3 VLELTDDNFESRISDTGSAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGIVPLAKVDCTAN---TNTCNKYGVSGY-PT 78 (481)
T ss_dssp CEEECTTTHHHHTTCCSSSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCCEEEEETTTC---HHHHHHTTCCEE-SE
T ss_pred eEEecHHHHHHHHHhCCCCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcCceEEEEEECCCC---HHHHHhcCCCCC-CE
Confidence 566778888776644444589999999999 9999999999999999999999999999999 999999999999 99
Q ss_pred EEEEecCCcceeecCCCCCChHHHHHHHHHHhcCcccccccCCCCCCCCCCCeEEE-cccchHHHhhcCCCcEEEEEECC
Q 023747 98 VVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIV-VGKTFDDLVLNSHKDVLLEVYTP 176 (278)
Q Consensus 98 l~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~~~~~~~~s~~~p~~~~~~v~~l-~~~~~~~~i~~~~~~~~v~f~~~ 176 (278)
+ .++.+|. ....|.|.++.+.|.+|+.+.+.. .+..+ +.+++.+++ ..++.++|.|+.+
T Consensus 79 l-~~~~~g~-~~~~~~G~~~~~~l~~~~~~~~~~-----------------~~~~i~~~~~~~~~~-~~~~~~vv~~~~~ 138 (481)
T 3f8u_A 79 L-KIFRDGE-EAGAYDGPRTADGIVSHLKKQAGP-----------------ASVPLRTEEEFKKFI-SDKDASIVGFFDD 138 (481)
T ss_dssp E-EEEETTE-EEEECCSCSSHHHHHHHHHHHTSC-----------------SEEEECSHHHHHHHT-TSSSCEEEEEESC
T ss_pred E-EEEeCCc-eeeeecCccCHHHHHHHHHhhccc-----------------CceecCCHHHHHHHH-hcCCcEEEEEECC
Confidence 9 6666553 345679999999999999998632 35666 557777776 5567888989988
Q ss_pred CChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCC-CCCCCcCCCeEEEEeCC-----CccCceEec-CCCCHHHHHH
Q 023747 177 WCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASANEH-PKLQVEEYPTLLFYPAG-----DKANPIKVS-ARSSSKNIAA 249 (278)
Q Consensus 177 ~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~~~-~~~~i~~~Ptl~~f~~g-----~~~~~~~~~-g~~~~~~l~~ 249 (278)
+|+.+ ...|.++|..+++ ++.|+.++. .++ .+++++..| +++|+.+ ....++.|. |..+.+.|.+
T Consensus 139 ~~~~~---~~~f~~~a~~~~~--~~~F~~~~~--~~~~~~~~v~~~~-i~~~~p~~~~~~~~~~~~~y~~~~~~~~~l~~ 210 (481)
T 3f8u_A 139 SFSEA---HSEFLKAASNLRD--NYRFAHTNV--ESLVNEYDDNGEG-IILFRPSHLTNKFEDKTVAYTEQKMTSGKIKK 210 (481)
T ss_dssp TTCHH---HHHHHHHHHHHTT--TSCEEEECC--HHHHHHHCSSSEE-EEEECCGGGCBTTBCSEEECCCSSCCHHHHHH
T ss_pred Cccch---HHHHHHHHHHhcc--CceEEEECC--HHHHHHhCCCCCc-EEEEecccccCccCCcccccCCCCCCHHHHHH
Confidence 87665 5679999999987 688887641 133 477887766 7777621 111256888 7899999999
Q ss_pred HHHHHhcccC
Q 023747 250 FIKEQLKEKD 259 (278)
Q Consensus 250 ~i~~~~~~~~ 259 (278)
||..+.-+..
T Consensus 211 fi~~~~~p~v 220 (481)
T 3f8u_A 211 FIQENIFGIC 220 (481)
T ss_dssp HHHHHTTTTS
T ss_pred HHHHhCCCCc
Confidence 9999886554
No 15
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.85 E-value=9.1e-21 Score=142.53 Aligned_cols=109 Identities=23% Similarity=0.434 Sum_probs=97.3
Q ss_pred CCCCeEEEcccchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcC---CCceEEEEEeCCCC-CC-CCCCCcC
Q 023747 146 TNANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKG---LDNLVIAKIDASAN-EH-PKLQVEE 220 (278)
Q Consensus 146 ~~~~v~~l~~~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~---~~~~~~~~vd~~~~-~~-~~~~i~~ 220 (278)
....|..+++++|++.+.+.+++++|.||++||++|+.+.|.|++++..+.. ..++.|+.||++.+ ++ .+|+|.+
T Consensus 13 ~~~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~ 92 (127)
T 3h79_A 13 RPSRVVELTDETFDSIVMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYPDVIERMRVSG 92 (127)
T ss_dssp CCCCCEECCTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCHHHHHHTTCCS
T ss_pred CCCceEECChhhHHHHHhCCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccHhHHHhcCCcc
Confidence 4567999999999999977789999999999999999999999999998752 22699999999998 66 5899999
Q ss_pred CCeEEEEeCCCccCceEecCCCCHHHHHHHHHHH
Q 023747 221 YPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQ 254 (278)
Q Consensus 221 ~Ptl~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~ 254 (278)
+||+++|++|+...++.|.|.++.+.|.+||.++
T Consensus 93 ~Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 93 FPTMRYYTRIDKQEPFEYSGQRYLSLVDSFVFQN 126 (127)
T ss_dssp SSEEEEECSSCSSSCEECCSCCCHHHHHHHHHHH
T ss_pred CCEEEEEeCCCCCCceEecCCccHHHHHHHHHhc
Confidence 9999999998876567899999999999999875
No 16
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.82 E-value=5.2e-19 Score=147.83 Aligned_cols=220 Identities=13% Similarity=0.095 Sum_probs=155.3
Q ss_pred cccccccCCCCceeeeeeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcC---ceEEEEEeCCCcccchhHHHHcCC
Q 023747 16 SCTLISNLPTTSLELLKVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKG---KIMFTAVDIADEDLAKPFLTLFGL 91 (278)
Q Consensus 16 ~~~~v~~~~~~~~~~~~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~---~v~f~~vd~~~~~~~~~l~~~~~i 91 (278)
...++.++..++...+. +.+++++|.||++| ++|+.+.|.|+++++++++ .+.|+.|||+...+ ..+|++|+|
T Consensus 11 ~~~v~~l~~~~f~~~i~--~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~-~~l~~~~~v 87 (244)
T 3q6o_A 11 SDPLTLLQADTVRGAVL--GSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETN-SAVCRDFNI 87 (244)
T ss_dssp TSSSEEECTTTHHHHHS--SCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTT-HHHHHHTTC
T ss_pred CCCceeCChhhHHHHHh--hCCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhh-HHHHHHcCC
Confidence 44677787877766553 35589999999999 9999999999999999987 79999999953222 899999999
Q ss_pred CCCCceEEEEecCCc----ceeecCCCCCChHHHHHHHHHHhcCcccccccCCCCCCCCCCCeEEEcccchHHHhhcC-C
Q 023747 92 EESKNTVVTAFDNKA----ISKFLLESDLTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIVVGKTFDDLVLNS-H 166 (278)
Q Consensus 92 ~~~~Ptl~~~~~~~~----~~~~~~~g~~~~~~i~~fi~~~~~~~~~~~~~s~~~p~~~~~~v~~l~~~~~~~~i~~~-~ 166 (278)
.++ ||+ .+++.+. +..+.+.| .+.+.|.+++.+.+..... ..|. ....+..++..++..++... .
T Consensus 88 ~~~-Pt~-~~~~~g~~~~~g~~~~~~g-~~~~~l~~~i~~~l~~~~~------~~p~-~~p~l~~~~~~~l~~~~~~~~~ 157 (244)
T 3q6o_A 88 PGF-PTV-RFFXAFTXNGSGAVFPVAG-ADVQTLRERLIDALESHHD------TWPP-ACPPLEPAXLEEIDGFFARNNE 157 (244)
T ss_dssp CSS-SEE-EEECTTCCSSSCEECCCTT-CCHHHHHHHHHHHHHTCTT------SCCT-TSCCCSCCCHHHHHTHHHHCCC
T ss_pred Ccc-CEE-EEEeCCCcCCCCeeEecCC-CCHHHHHHHHHHHHHhccc------cCCC-CCCCcccccHHHHHHHhhcCCC
Confidence 999 999 6666432 22334455 7999999999998865431 1221 11134445667788777554 4
Q ss_pred CcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCC-CCCCCcCCCeEEEEeCCCccCceEec-CCCCH
Q 023747 167 KDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASANEH-PKLQVEEYPTLLFYPAGDKANPIKVS-ARSSS 244 (278)
Q Consensus 167 ~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~~~-~~~~i~~~Ptl~~f~~g~~~~~~~~~-g~~~~ 244 (278)
++..+.|....|. ...+++..+.....+.+..++-...++ .+|+|+++|++++|..+++.. .+. ...+.
T Consensus 158 ~~~al~f~~~~~~-------~~~~~~~d~~~~~~i~v~~~~~~~~~l~~~f~v~~~Pslvl~~~~g~~~--~~~~~~~~r 228 (244)
T 3q6o_A 158 EYLALIFEXGGSY-------LAREVALDLSQHKGVAVRRVLNTEANVVRKFGVTDFPSCYLLFRNGSVS--RVPVLMESR 228 (244)
T ss_dssp SEEEEEEECTTCC-------HHHHHHHHTTTCTTEEEEEEETTCHHHHHHHTCCCSSEEEEEETTSCEE--ECCCSSSSH
T ss_pred ceEEEEEEECCcc-------hHHHHHHHhccCCceEEEEEeCchHHHHHHcCCCCCCeEEEEeCCCCeE--eeccccccH
Confidence 5666777776543 345566677655578888888654455 589999999999997666542 444 34566
Q ss_pred HHHHHHHHHHhcc
Q 023747 245 KNIAAFIKEQLKE 257 (278)
Q Consensus 245 ~~l~~~i~~~~~~ 257 (278)
+.+..+++...|.
T Consensus 229 ~~~~~~l~~~~~~ 241 (244)
T 3q6o_A 229 SFYTAYLQRLSGL 241 (244)
T ss_dssp HHHHHHHHTC---
T ss_pred HHHHHHHHhCCCC
Confidence 7777777766654
No 17
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.82 E-value=4.5e-19 Score=163.26 Aligned_cols=203 Identities=12% Similarity=0.150 Sum_probs=157.9
Q ss_pred ccccccCCCCceeeeeeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCc-eEEEEEeCCCcccchhHHHHcCCCCC
Q 023747 17 CTLISNLPTTSLELLKVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGK-IMFTAVDIADEDLAKPFLTLFGLEES 94 (278)
Q Consensus 17 ~~~v~~~~~~~~~~~~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~-v~f~~vd~~~~~~~~~l~~~~~i~~~ 94 (278)
..++.++++++...+ +.+++++|.||++| ++|+.+.|.|+++|+.+++. +.|+.|||+.+ +.+|++|||.++
T Consensus 14 ~~v~~l~~~~f~~~~---~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~~---~~l~~~~~v~~~ 87 (504)
T 2b5e_A 14 SAVVKLATDSFNEYI---QSHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTEN---QDLCMEHNIPGF 87 (504)
T ss_dssp SSCEECCTTTHHHHH---TTCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTTC---HHHHHHTTCCSS
T ss_pred CCcEECCHHHHHHHH---hcCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECCCC---HHHHHhcCCCcC
Confidence 357778888887654 56789999999999 99999999999999999985 99999999999 999999999999
Q ss_pred CceEEEEecCCcce-eecCCCCCChHHHHHHHHHHhcCcccccccCCCCCCCCCCCeEEEcccchHHHhhcCC-CcEEEE
Q 023747 95 KNTVVTAFDNKAIS-KFLLESDLTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIVVGKTFDDLVLNSH-KDVLLE 172 (278)
Q Consensus 95 ~Ptl~~~~~~~~~~-~~~~~g~~~~~~i~~fi~~~~~~~~~~~~~s~~~p~~~~~~v~~l~~~~~~~~i~~~~-~~~~v~ 172 (278)
||+ .+|.+|... ...|.|.++.+.|.+|+.+.+.. .+..++. +++++.... ...+|.
T Consensus 88 -Pt~-~~~~~g~~~~~~~~~G~~~~~~l~~~l~~~~~~-----------------~v~~i~~--~~~~~~~~~~~~~~v~ 146 (504)
T 2b5e_A 88 -PSL-KIFKNSDVNNSIDYEGPRTAEAIVQFMIKQSQP-----------------AVAVVAD--LPAYLANETFVTPVIV 146 (504)
T ss_dssp -SEE-EEEETTCTTCEEECCSCCSHHHHHHHHHHHTSC-----------------SEEECSC--HHHHHHHSCCSSCEEE
T ss_pred -CEE-EEEeCCccccceeecCCCCHHHHHHHHHHhcCC-----------------cceeHHH--HHHHHhcCCCceEEEE
Confidence 999 666655421 55679999999999999998632 3667766 888875544 155555
Q ss_pred EECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCCCCCCCcCCCeEEEEeCCCccCceEecCC-C---CHHHHH
Q 023747 173 VYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASANEHPKLQVEEYPTLLFYPAGDKANPIKVSAR-S---SSKNIA 248 (278)
Q Consensus 173 f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~~~~~~~i~~~Ptl~~f~~g~~~~~~~~~g~-~---~~~~l~ 248 (278)
|+.+..+ ...+.|.++|..+++ ++.|+.++ .-..++++. +++|+... .++.|.|. . +.+.|.
T Consensus 147 ~f~~~~~---~~~~~f~~~A~~~~~--~~~F~~~~---~~~~~~~~~----i~l~~~~~--~~~~~~g~~~~~~~~~~l~ 212 (504)
T 2b5e_A 147 QSGKIDA---DFNATFYSMANKHFN--DYDFVSAE---NADDDFKLS----IYLPSAMD--EPVVYNGKKADIADADVFE 212 (504)
T ss_dssp EEESCCH---HHHHHHHHHHHHTTT--TCEEEEEE---CTTSCCEEE----EEETTEEE--EEEECCSCHHHHTSHHHHH
T ss_pred EeCCCCc---hHHHHHHHHHHHhhc--CcEEEEEH---HHHHhcCCe----EEecCCCC--cccccCCcccccCCHHHHH
Confidence 6555443 346789999999987 78999887 222456664 66775533 36689988 6 999999
Q ss_pred HHHHHHhcccCC
Q 023747 249 AFIKEQLKEKDQ 260 (278)
Q Consensus 249 ~~i~~~~~~~~~ 260 (278)
+||..+.-+...
T Consensus 213 ~fi~~~~~p~v~ 224 (504)
T 2b5e_A 213 KWLQVEALPYFG 224 (504)
T ss_dssp HHHHHHSSCSSC
T ss_pred HHHHhcccCCcc
Confidence 999988766443
No 18
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.82 E-value=3.6e-19 Score=157.15 Aligned_cols=195 Identities=14% Similarity=0.184 Sum_probs=154.8
Q ss_pred eeeeeecCCceEEEEEeCccchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCceEEEEecCCccee
Q 023747 30 LLKVSQIDTLDMVYVFAKADDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFDNKAISK 109 (278)
Q Consensus 30 ~~~~~~~~~~~~v~F~~~~~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Ptl~~~~~~~~~~~ 109 (278)
+....+....++|.||.+. +......|.++|..+. .+.|+.. .. ..+|+++|+++ |++ .+|..-...+
T Consensus 28 ~~~~~~~~~~~vvgff~~~--~~~~~~~f~~~A~~~~-~~~F~~t---~~---~~v~~~~~v~~--~~i-~lfk~f~~~~ 95 (361)
T 3uem_A 28 AESLVESSEVAVIGFFKDV--ESDSAKQFLQAAEAID-DIPFGIT---SN---SDVFSKYQLDK--DGV-VLFKKFDEGR 95 (361)
T ss_dssp HHHHHHTSSEEEEEECSCT--TSHHHHHHHHHHHHCS-SSCEEEE---CC---HHHHHHTTCSS--SEE-EEEESSTTSE
T ss_pred HHHHHhcCCcEEEEEEcCC--CchHHHHHHHHHhcCC-CceEEEE---Cc---HHHHHHhCCCC--CeE-EEEEecCCCc
Confidence 4445566788888888765 1233578999999994 5888753 35 68999999986 788 5554422345
Q ss_pred ecCCCCCChHHHHHHHHHHhcCcccccccCCCCCCCCCCCeEEEcccchHHHhhcCCCcEEEEEECCCChhHHHHHHHHH
Q 023747 110 FLLESDLTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIE 189 (278)
Q Consensus 110 ~~~~g~~~~~~i~~fi~~~~~~~~~~~~~s~~~p~~~~~~v~~l~~~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~ 189 (278)
..|.|..+.++|.+|+.... ...|..++.+++.+++....+.++|+||++||++|..+.+.|+
T Consensus 96 ~~~~g~~~~~~i~~fi~~~~-----------------~p~v~~~~~~~~~~~~~~~~~~~~v~F~~~~~~~~~~~~~~~~ 158 (361)
T 3uem_A 96 NNFEGEVTKENLLDFIKHNQ-----------------LPLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFK 158 (361)
T ss_dssp EECCSCCCHHHHHHHHHHHS-----------------SCSEEECSTTTHHHHHSCSCCEEEEEECCSSSSSHHHHHHHHH
T ss_pred cccCCcCCHHHHHHHHHHcC-----------------CCcceecCcccHHHHhcCCCCcEEEEEEeCCchhHHHHHHHHH
Confidence 56789999999999999864 2248899999999988666778899999999999999999999
Q ss_pred HHHHHhcCCCceEEEEEeCCC--C-CC-CCCCCcC--CCeEEEEeCCCccCceEec---CCCCHHHHHHHHHHHhcc
Q 023747 190 KLAKHFKGLDNLVIAKIDASA--N-EH-PKLQVEE--YPTLLFYPAGDKANPIKVS---ARSSSKNIAAFIKEQLKE 257 (278)
Q Consensus 190 ~~a~~~~~~~~~~~~~vd~~~--~-~~-~~~~i~~--~Ptl~~f~~g~~~~~~~~~---g~~~~~~l~~~i~~~~~~ 257 (278)
++|+.+++ ++.|+.+|++. + .+ ..|++.. +|++++|..|+... .|. |..+.+.|.+|+.+.+..
T Consensus 159 ~~A~~~~~--~i~f~~vd~~~~~~~~~~~~fgi~~~~~P~~~~~~~~~~~~--ky~~~~~~~~~~~l~~fi~~~l~g 231 (361)
T 3uem_A 159 TAAESFKG--KILFIFIDSDHTDNQRILEFFGLKKEECPAVRLITLEEEMT--KYKPESEELTAERITEFCHRFLEG 231 (361)
T ss_dssp HHHGGGTT--TCEEEEECTTSGGGHHHHHHTTCCTTTCSEEEEEECC--CC--EECCSSCCCCHHHHHHHHHHHHTT
T ss_pred HHHHHccC--ceEEEEecCChHHHHHHHHHcCCCccCCccEEEEEcCCccc--ccCCCccccCHHHHHHHHHHHhcC
Confidence 99999998 79999999993 4 44 4789987 99999999866543 565 789999999999998863
No 19
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.82 E-value=1.3e-19 Score=134.74 Aligned_cols=111 Identities=37% Similarity=0.753 Sum_probs=97.3
Q ss_pred CCCCeEEEcccchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcC---CCceEEEEEeCCCCCCCCCCCcCCC
Q 023747 146 TNANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKG---LDNLVIAKIDASANEHPKLQVEEYP 222 (278)
Q Consensus 146 ~~~~v~~l~~~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~---~~~~~~~~vd~~~~~~~~~~i~~~P 222 (278)
..+.|..+++++|.+.+...+++++|+||++||++|+.+.|.|+++++.+.+ ..++.|+.+|++.+++.+ ++.++|
T Consensus 5 ~~~~v~~l~~~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~-~v~~~P 83 (121)
T 2djj_A 5 SEGPVTVVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATANDVPD-EIQGFP 83 (121)
T ss_dssp CSCSSEECCTTTTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSCCSS-CCSSSS
T ss_pred CCCCeEEecccCHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECccccccc-ccCcCC
Confidence 4567999999999998767789999999999999999999999999999976 236999999999988767 999999
Q ss_pred eEEEEeCCCccCceEecCCCCHHHHHHHHHHHhcc
Q 023747 223 TLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKE 257 (278)
Q Consensus 223 tl~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~~~ 257 (278)
|+++|++|+.....++.|..+.+.|.+||.++++.
T Consensus 84 t~~~~~~~~~~~~~~~~G~~~~~~l~~~i~~~~~~ 118 (121)
T 2djj_A 84 TIKLYPAGAKGQPVTYSGSRTVEDLIKFIAENGKY 118 (121)
T ss_dssp EEEEECSSCTTSCCCCCCCSCHHHHHHHHHHTSSS
T ss_pred eEEEEeCcCCCCceEecCCCCHHHHHHHHHhccCc
Confidence 99999888663233789999999999999998764
No 20
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.81 E-value=1.1e-19 Score=132.18 Aligned_cols=98 Identities=21% Similarity=0.488 Sum_probs=85.2
Q ss_pred EEEc-ccchHHHhhcC-CCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcCCCeEEE
Q 023747 151 QIVV-GKTFDDLVLNS-HKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTLLF 226 (278)
Q Consensus 151 ~~l~-~~~~~~~i~~~-~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~~Ptl~~ 226 (278)
..++ .++|++.+.+. ++.++|.|||+||++|+.+.|.+++++..+. ++.|+.||++++ ++ .+|+|.++||+++
T Consensus 3 ~~i~~~~~f~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~---~~~~~~vd~d~~~~l~~~~~V~~~PT~~~ 79 (105)
T 3zzx_A 3 YQVKDQEDFTKQLNEAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMS---DVVFLKVDVDECEDIAQDNQIACMPTFLF 79 (105)
T ss_dssp EECCSHHHHHHHHHHTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCT---TEEEEEEETTTCHHHHHHTTCCBSSEEEE
T ss_pred EEeCCHHHHHHHHHhcCCCEEEEEEECCCCCCccCCCcchhhhhhccC---CeEEEEEecccCHHHHHHcCCCeecEEEE
Confidence 4454 47899988654 6789999999999999999999999999986 489999999998 66 5999999999999
Q ss_pred EeCCCccCceEecCCCCHHHHHHHHHHH
Q 023747 227 YPAGDKANPIKVSARSSSKNIAAFIKEQ 254 (278)
Q Consensus 227 f~~g~~~~~~~~~g~~~~~~l~~~i~~~ 254 (278)
|++|+.+. ++.| .+.+.|.+||++|
T Consensus 80 ~~~G~~v~--~~~G-~~~~~l~~~i~k~ 104 (105)
T 3zzx_A 80 MKNGQKLD--SLSG-ANYDKLLELVEKN 104 (105)
T ss_dssp EETTEEEE--EEES-CCHHHHHHHHHHH
T ss_pred EECCEEEE--EEeC-cCHHHHHHHHHhc
Confidence 99998765 6777 5899999999876
No 21
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.81 E-value=3.7e-19 Score=140.35 Aligned_cols=121 Identities=15% Similarity=0.225 Sum_probs=99.9
Q ss_pred CCCeEEEcccchHHHhhcC-CCcEEEEEEC-------CCChhHHHHHHHHHHHHHHhc-----CCCceEEEEEeCCCC-C
Q 023747 147 NANVQIVVGKTFDDLVLNS-HKDVLLEVYT-------PWCVTCETTSKQIEKLAKHFK-----GLDNLVIAKIDASAN-E 212 (278)
Q Consensus 147 ~~~v~~l~~~~~~~~i~~~-~~~~~v~f~~-------~~c~~c~~~~~~~~~~a~~~~-----~~~~~~~~~vd~~~~-~ 212 (278)
...|..+|+++|++++... +.+++|.||| +||++|+.+.|.|+++|+.+. + ++.|++||++++ +
T Consensus 17 ~~~vi~lt~~nF~~~v~~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~--~v~f~kvD~d~~~~ 94 (178)
T 3ga4_A 17 DTGVITVTADNYPLLSRGVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQS--LNLFFTVDVNEVPQ 94 (178)
T ss_dssp TTSEEECCTTTHHHHTTCCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTC--CEEEEEEETTTCHH
T ss_pred cCCCEECCHHHHHHHHcccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCC--CEEEEEEECccCHH
Confidence 3468999999999988543 4579999999 499999999999999999997 4 799999999999 6
Q ss_pred C-CCCCCcCCCeEEEEeCCCccC----------ceEe---cC-CCCHHHHHHHHHHHhcccCCCCchhhhhh
Q 023747 213 H-PKLQVEEYPTLLFYPAGDKAN----------PIKV---SA-RSSSKNIAAFIKEQLKEKDQSPKDEQWKE 269 (278)
Q Consensus 213 ~-~~~~i~~~Ptl~~f~~g~~~~----------~~~~---~g-~~~~~~l~~~i~~~~~~~~~~~~~~~~~~ 269 (278)
+ .+|+|+++||+++|++|.... ...| .| .++.+.|.+||.+++++...+.+.-.|.+
T Consensus 95 la~~~~I~siPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~~t~~~i~I~rp~ny~~ 166 (178)
T 3ga4_A 95 LVKDLKLQNVPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAKILNISITVPQAFNVQE 166 (178)
T ss_dssp HHHHTTCCSSCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHHHHTCCCCCCCSCC---
T ss_pred HHHHcCCCCCCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHHhcCCCccccCCCChHH
Confidence 6 599999999999999887543 2455 35 79999999999999998876655555543
No 22
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.80 E-value=4.4e-19 Score=134.09 Aligned_cols=113 Identities=42% Similarity=0.807 Sum_probs=99.3
Q ss_pred CCCCeEEEcccchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcCCCe
Q 023747 146 TNANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPT 223 (278)
Q Consensus 146 ~~~~v~~l~~~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~~Pt 223 (278)
+.+.|..++.++|...+...+++++|+||++||++|+.+.|.|.+++..+.+..++.|+.+|++.+ .+ .+|+|.++||
T Consensus 5 ~~~~v~~l~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt 84 (133)
T 2dj3_A 5 SSGPVKVVVGKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDITNDQYKVEGFPT 84 (133)
T ss_dssp SSCSSEECCTTTCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSCCCCSSCCCSSSSE
T ss_pred CCCceEEEcCCCHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCHHHHhhcCCCcCCE
Confidence 456799999999999887678999999999999999999999999999998544799999999988 55 4799999999
Q ss_pred EEEEeCCCccCceEec-CCCCHHHHHHHHHHHhccc
Q 023747 224 LLFYPAGDKANPIKVS-ARSSSKNIAAFIKEQLKEK 258 (278)
Q Consensus 224 l~~f~~g~~~~~~~~~-g~~~~~~l~~~i~~~~~~~ 258 (278)
+++|++|+.+..+.|. |..+.+.|.+||.++++..
T Consensus 85 ~~~~~~g~~~~~~~~~gg~~~~~~l~~~l~~~~~~~ 120 (133)
T 2dj3_A 85 IYFAPSGDKKNPIKFEGGNRDLEHLSKFIDEHATKR 120 (133)
T ss_dssp EEEECTTCTTSCEECCSSCCSTTHHHHHHHHHSSSC
T ss_pred EEEEeCCCcccceEecCCCcCHHHHHHHHHHhcccc
Confidence 9999988876566788 5589999999999998754
No 23
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.80 E-value=3.7e-19 Score=130.05 Aligned_cols=105 Identities=15% Similarity=0.387 Sum_probs=95.5
Q ss_pred CCeEEEcccchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcCCCeEE
Q 023747 148 ANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTLL 225 (278)
Q Consensus 148 ~~v~~l~~~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~~Ptl~ 225 (278)
..+..++.++|.+.+...+++++|+||++||++|+.+.|.+.++++.+.+ ++.|+.+|++.+ ++ .+|++.++|+++
T Consensus 4 ~~v~~l~~~~~~~~~~~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 81 (111)
T 3gnj_A 4 MSLEKLDTNTFEQLIYDEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEE--SFGFYYVDVEEEKTLFQRFSLKGVPQIL 81 (111)
T ss_dssp CCSEECCHHHHHHHHTTSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTT--TSEEEEEETTTCHHHHHHTTCCSSCEEE
T ss_pred CcceecCHHHHHHHHHhcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCC--ceEEEEEECCcChhHHHhcCCCcCCEEE
Confidence 35889999999999977889999999999999999999999999999986 699999999998 56 589999999999
Q ss_pred EEeCCCccCceEecCCCCHHHHHHHHHHHhc
Q 023747 226 FYPAGDKANPIKVSARSSSKNIAAFIKEQLK 256 (278)
Q Consensus 226 ~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~~ 256 (278)
+|++|+.+. ++.|..+.+.|.+||+++++
T Consensus 82 ~~~~g~~~~--~~~g~~~~~~l~~~l~~~l~ 110 (111)
T 3gnj_A 82 YFKDGEYKG--KMAGDVEDDEVEQMIADVLE 110 (111)
T ss_dssp EEETTEEEE--EEESSCCHHHHHHHHHHHHH
T ss_pred EEECCEEEE--EEeccCCHHHHHHHHHHHhc
Confidence 999887653 78999999999999998875
No 24
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.79 E-value=1.5e-19 Score=135.96 Aligned_cols=105 Identities=21% Similarity=0.200 Sum_probs=95.1
Q ss_pred CCeEEEcccchHHHhhcCCCcEEEEEECCCC--hhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcCCCe
Q 023747 148 ANVQIVVGKTFDDLVLNSHKDVLLEVYTPWC--VTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPT 223 (278)
Q Consensus 148 ~~v~~l~~~~~~~~i~~~~~~~~v~f~~~~c--~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~~Pt 223 (278)
.....++.++|++.+.+.+++++|.||++|| ++|+.+.|.+++++..|.+ ++.|++||++++ ++ .+|+|.++||
T Consensus 15 ~g~~~vt~~~F~~~v~~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~--~v~~~KVdvDe~~~la~~ygV~siPT 92 (137)
T 2qsi_A 15 NAPTLVDEATVDDFIAHSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPG--RLVAAEVAAEAERGLMARFGVAVCPS 92 (137)
T ss_dssp --CEEECTTTHHHHHHTSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTT--TEEEEEECGGGHHHHHHHHTCCSSSE
T ss_pred cCCcccCHhHHHHHHhcCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccC--CcEEEEEECCCCHHHHHHcCCccCCE
Confidence 3467999999999997666799999999999 9999999999999999987 799999999998 66 5999999999
Q ss_pred EEEEeCCCccCceEecCCCCHHHHHHHHHHHhc
Q 023747 224 LLFYPAGDKANPIKVSARSSSKNIAAFIKEQLK 256 (278)
Q Consensus 224 l~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~~ 256 (278)
+++|++|+.+. +..|..+.+.|.+||++++.
T Consensus 93 lilFkdG~~v~--~~vG~~~k~~l~~~l~~~l~ 123 (137)
T 2qsi_A 93 LAVVQPERTLG--VIAKIQDWSSYLAQIGAMLA 123 (137)
T ss_dssp EEEEECCEEEE--EEESCCCHHHHHHHHHHHHH
T ss_pred EEEEECCEEEE--EEeCCCCHHHHHHHHHHHhc
Confidence 99999999876 78999999999999998883
No 25
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.79 E-value=9.5e-19 Score=127.26 Aligned_cols=105 Identities=24% Similarity=0.555 Sum_probs=94.0
Q ss_pred CCeEEEcccchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcCCCeEE
Q 023747 148 ANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTLL 225 (278)
Q Consensus 148 ~~v~~l~~~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~~Ptl~ 225 (278)
+.|..++.++|.+.+...+++++|+||++||++|+.+.|.+.+++..+.+ ++.++.+|++.+ ++ .+|++.++|+++
T Consensus 2 ~~v~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~ 79 (108)
T 2trx_A 2 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQG--KLTVAKLNIDQNPGTAPKYGIRGIPTLL 79 (108)
T ss_dssp TTEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TEEEEEEETTTCTTHHHHTTCCSSSEEE
T ss_pred CcceecchhhHHHHHHhcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCC--CcEEEEEECCCCHHHHHHcCCcccCEEE
Confidence 35889999999988877889999999999999999999999999999986 699999999988 55 589999999999
Q ss_pred EEeCCCccCceEecCCCCHHHHHHHHHHHhc
Q 023747 226 FYPAGDKANPIKVSARSSSKNIAAFIKEQLK 256 (278)
Q Consensus 226 ~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~~ 256 (278)
+|++|+... ++.|..+.+.|.+||++.++
T Consensus 80 ~~~~G~~~~--~~~G~~~~~~l~~~l~~~l~ 108 (108)
T 2trx_A 80 LFKNGEVAA--TKVGALSKGQLKEFLDANLA 108 (108)
T ss_dssp EEETTEEEE--EEESCCCHHHHHHHHHHHHC
T ss_pred EEeCCEEEE--EEecCCCHHHHHHHHHHhhC
Confidence 998887653 78899999999999998764
No 26
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.79 E-value=2.5e-19 Score=135.93 Aligned_cols=118 Identities=21% Similarity=0.273 Sum_probs=102.2
Q ss_pred cccCCCCceeeeeeeecCCceEEEEEeCccchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCC--CCce
Q 023747 20 ISNLPTTSLELLKVSQIDTLDMVYVFAKADDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEE--SKNT 97 (278)
Q Consensus 20 v~~~~~~~~~~~~~~~~~~~~~v~F~~~~~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~--~~Pt 97 (278)
+.++..|+..+ ++.+.+++|.||++|++|+.+.|.++++|++|+|++.|+++|.+++ +.+++.|||.+ . ||
T Consensus 9 ~~~t~~~f~~~---~~~~~pv~v~f~a~~~~c~~~~p~l~~~A~~~~gk~~f~~vd~d~~---~~~a~~~gi~~~~i-Pt 81 (133)
T 2djk_A 9 GEIGPETYSDY---MSAGIPLAYIFAETAEERKELSDKLKPIAEAQRGVINFGTIDAKAF---GAHAGNLNLKTDKF-PA 81 (133)
T ss_dssp EECCHHHHHHH---HHTTSCEEEEECSCSSSHHHHHHHHHHHHHSSTTTSEEEEECTTTT---GGGTTTTTCCSSSS-SE
T ss_pred eccChHHHHHH---hcCCCCEEEEEecChhhHHHHHHHHHHHHHHhCCeEEEEEEchHHh---HHHHHHcCCCcccC-CE
Confidence 34555566533 5678889999999999999999999999999999999999999988 89999999999 8 99
Q ss_pred EEEEecCCcceeecCC--CCCChHHHHHHHHHHhcCcccccccCCCCCCC
Q 023747 98 VVTAFDNKAISKFLLE--SDLTPSNIEEFCSRLLHGTLTPYLKSQPIPDN 145 (278)
Q Consensus 98 l~~~~~~~~~~~~~~~--g~~~~~~i~~fi~~~~~~~~~~~~~s~~~p~~ 145 (278)
+ .+++.+.+..|.+. |..+.+.|.+|++++++|+++++++|+++|+.
T Consensus 82 l-~i~~~~~g~~~~~~~~g~~~~~~l~~fi~~~l~Gkl~p~~kSe~iP~~ 130 (133)
T 2djk_A 82 F-AIQEVAKNQKFPFDQEKEITFEAIKAFVDDFVAGKIEPSIKSEPIPEK 130 (133)
T ss_dssp E-EEECTTTCCBCCCCSSSCCCHHHHHHHHHHHHHTCCCCSSCCCCCCTT
T ss_pred E-EEEecCcCcccCCCCccccCHHHHHHHHHHHHcCCcCccccCCCCCCc
Confidence 9 77765223456665 88999999999999999999999999999975
No 27
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.78 E-value=1.1e-18 Score=128.15 Aligned_cols=106 Identities=24% Similarity=0.416 Sum_probs=95.1
Q ss_pred eEEEcccchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcCCCeEEEE
Q 023747 150 VQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTLLFY 227 (278)
Q Consensus 150 v~~l~~~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~~Ptl~~f 227 (278)
+..++.++|++.+ .+++++|.||++||++|+.+.|.+.+++..+.+ ++.++.+|++.+ ++ .+|++.++|++++|
T Consensus 3 v~~l~~~~~~~~~--~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 78 (112)
T 2voc_A 3 IVKATDQSFSAET--SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGD--KLKIVKIDVDENQETAGKYGVMSIPTLLVL 78 (112)
T ss_dssp CEECCTTTHHHHH--SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTT--TCEEEEEETTTCCSHHHHTTCCSBSEEEEE
T ss_pred eEEecHHHHHHHh--CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC--CcEEEEEECCCCHHHHHHcCCCcccEEEEE
Confidence 6788999999988 788999999999999999999999999999986 699999999988 56 58999999999999
Q ss_pred eCCCccCceEecCCCCHHHHHHHHHHHhcccCCC
Q 023747 228 PAGDKANPIKVSARSSSKNIAAFIKEQLKEKDQS 261 (278)
Q Consensus 228 ~~g~~~~~~~~~g~~~~~~l~~~i~~~~~~~~~~ 261 (278)
++|+.+. ++.|..+.+.|.+|+.+++++....
T Consensus 79 ~~G~~~~--~~~G~~~~~~l~~~l~~~~~~~~~~ 110 (112)
T 2voc_A 79 KDGEVVE--TSVGFKPKEALQELVNKHLLEHHHH 110 (112)
T ss_dssp ETTEEEE--EEESCCCHHHHHHHHHTTSCSCCCC
T ss_pred eCCEEEE--EEeCCCCHHHHHHHHHHHHHhhccc
Confidence 8887653 7899999999999999999876543
No 28
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.78 E-value=2.5e-18 Score=129.48 Aligned_cols=104 Identities=23% Similarity=0.526 Sum_probs=93.6
Q ss_pred CeEEEcccchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcCCCeEEE
Q 023747 149 NVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTLLF 226 (278)
Q Consensus 149 ~v~~l~~~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~~Ptl~~ 226 (278)
.|..++.++|++.+...+++++|.||++||++|+.+.|.++++++.+.+ ++.|+.+|++.+ ++ .+|++.++|++++
T Consensus 23 ~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~ 100 (128)
T 2o8v_B 23 KIIHLTDDSFDTDVLKADGAILVDFWAEWCGPAKMIAPILDEIADEYQG--KLTVAKLNIDQNPGTAPKYGIRGIPTLLL 100 (128)
T ss_dssp CSEEECTTTHHHHTTTCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTT--TEEEEEEETTTCCTTSGGGTCCSSSEEEE
T ss_pred ccEecChhhHHHHHHhcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC--CeEEEEEECCCCHHHHHHcCCCccCEEEE
Confidence 5889999999988877889999999999999999999999999999986 699999999988 56 5899999999999
Q ss_pred EeCCCccCceEecCCCCHHHHHHHHHHHhc
Q 023747 227 YPAGDKANPIKVSARSSSKNIAAFIKEQLK 256 (278)
Q Consensus 227 f~~g~~~~~~~~~g~~~~~~l~~~i~~~~~ 256 (278)
|++|+.+. ++.|..+.+.|.+||++.++
T Consensus 101 ~~~G~~~~--~~~G~~~~~~l~~~l~~~l~ 128 (128)
T 2o8v_B 101 FKNGEVAA--TKVGALSKGQLKEFLDANLA 128 (128)
T ss_dssp EETTEEEE--EEESCCCHHHHHHHHHHHHC
T ss_pred EeCCEEEE--EEcCCCCHHHHHHHHHHhhC
Confidence 98887543 78899999999999998764
No 29
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.78 E-value=1.6e-18 Score=132.61 Aligned_cols=106 Identities=12% Similarity=0.181 Sum_probs=89.8
Q ss_pred eEEEcc-cchHHHhhc-CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcCCCeEE
Q 023747 150 VQIVVG-KTFDDLVLN-SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTLL 225 (278)
Q Consensus 150 v~~l~~-~~~~~~i~~-~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~~Ptl~ 225 (278)
+..++. ++|++.+.+ .+++++|.|||+||++|+.+.|.++++|.++.+ ++.|+.||++++ ++ .+|+|.++||++
T Consensus 23 v~~l~t~~~f~~~v~~~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~--~v~f~kVDVDe~~e~a~~y~V~siPT~~ 100 (160)
T 2av4_A 23 LQHLNSGWAVDQAIVNEDERLVCIRFGHDYDPDCMKMDELLYKVADDIKN--FCVIYLVDITEVPDFNTMYELYDPVSVM 100 (160)
T ss_dssp CEECCSHHHHHHHHHHCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT--TEEEEEEETTTCCTTTTTTTCCSSEEEE
T ss_pred hhccCCHHHHHHHHHhcCCCEEEEEEECCCChhHHHHHHHHHHHHHHccC--CcEEEEEECCCCHHHHHHcCCCCCCEEE
Confidence 555654 899988874 688999999999999999999999999999986 699999999999 77 599999999999
Q ss_pred EEeCCCccCce-------EecCCCC-HHHHHHHHHHHhcc
Q 023747 226 FYPAGDKANPI-------KVSARSS-SKNIAAFIKEQLKE 257 (278)
Q Consensus 226 ~f~~g~~~~~~-------~~~g~~~-~~~l~~~i~~~~~~ 257 (278)
+|++|+.+..- +..|..+ .+.|.++|..++..
T Consensus 101 fFk~G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~~r~ 140 (160)
T 2av4_A 101 FFYRNKHMMIDLGTGNNNKINWPMNNKQEFIDIVETIFRG 140 (160)
T ss_dssp EEETTEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHHHHH
T ss_pred EEECCEEEEEecCCCCcCeEEeecCCHHHHHHHHHHHHHH
Confidence 99999865101 3667766 89999999888743
No 30
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.78 E-value=1e-18 Score=129.82 Aligned_cols=110 Identities=25% Similarity=0.490 Sum_probs=96.6
Q ss_pred CCCCCCCeEEEcccchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcC
Q 023747 143 PDNTNANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEE 220 (278)
Q Consensus 143 p~~~~~~v~~l~~~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~ 220 (278)
|...+..+..++.++|.+.+.+.+++++|+||++||++|+.+.+.+.+++..+.+ ++.++.+|++.+ ++ .+|++.+
T Consensus 8 ~~~~~~~~~~~~~~~f~~~v~~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~--~v~~~~vd~d~~~~l~~~~~v~~ 85 (119)
T 1w4v_A 8 HHHGSTTFNIQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHG--KVVMAKVDIDDHTDLAIEYEVSA 85 (119)
T ss_dssp --CCCSEEECCSHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--SSEEEEEETTTTHHHHHHTTCCS
T ss_pred ccCCceEEEecChhhHHHHHHcCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC--CeEEEEEeCCCCHHHHHHcCCCc
Confidence 3335667899999999998888889999999999999999999999999999976 699999999988 56 5899999
Q ss_pred CCeEEEEeCCCccCceEecCCCCHHHHHHHHHHHhc
Q 023747 221 YPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLK 256 (278)
Q Consensus 221 ~Ptl~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~~ 256 (278)
+|++++|++|+.+. ++.|..+.+.|.+||++.++
T Consensus 86 ~Pt~~~~~~G~~~~--~~~G~~~~~~l~~~l~~~l~ 119 (119)
T 1w4v_A 86 VPTVLAMKNGDVVD--KFVGIKDEDQLEAFLKKLIG 119 (119)
T ss_dssp SSEEEEEETTEEEE--EEESCCCHHHHHHHHHHHHC
T ss_pred ccEEEEEeCCcEEE--EEcCCCCHHHHHHHHHHHhC
Confidence 99999998887543 78899999999999998764
No 31
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.78 E-value=6.9e-18 Score=155.06 Aligned_cols=221 Identities=11% Similarity=0.080 Sum_probs=158.0
Q ss_pred cccccccCCCCceeeeeeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcC---ceEEEEEeCCCcccchhHHHHcCC
Q 023747 16 SCTLISNLPTTSLELLKVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKG---KIMFTAVDIADEDLAKPFLTLFGL 91 (278)
Q Consensus 16 ~~~~v~~~~~~~~~~~~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~---~v~f~~vd~~~~~~~~~l~~~~~i 91 (278)
..+|+.++..++...+ .+.+++++|.||++| ++|+.+.|.|+++++++++ .+.|+.|||+...+ .++|++|+|
T Consensus 11 ~~~V~~Lt~~~f~~~v--~~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~-~~l~~~~~V 87 (519)
T 3t58_A 11 SDPLTLLDADSVRPTV--LGSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETN-SAVCREFNI 87 (519)
T ss_dssp TSSSEEECTTTHHHHH--SSCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGG-HHHHHHTTC
T ss_pred CCCcEECChHHHHHHH--HhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCcccc-HHHHHHcCC
Confidence 3467778787776544 345689999999999 9999999999999999987 79999999975322 799999999
Q ss_pred CCCCceEEEEecCCcc---eeecCCCCCChHHHHHHHHHHhcCcccccccCCCCCCCCCCCeEEEcccchHHHhhcC-CC
Q 023747 92 EESKNTVVTAFDNKAI---SKFLLESDLTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIVVGKTFDDLVLNS-HK 167 (278)
Q Consensus 92 ~~~~Ptl~~~~~~~~~---~~~~~~g~~~~~~i~~fi~~~~~~~~~~~~~s~~~p~~~~~~v~~l~~~~~~~~i~~~-~~ 167 (278)
.++ ||+ .+++.+.. ....+.|..+.+.+.+++.+.+..... ..|. ....+..++..++++++... .+
T Consensus 88 ~~~-PTl-~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l~~~~~------~~P~-~~p~l~~it~~~l~~~l~~~~~~ 158 (519)
T 3t58_A 88 AGF-PTV-RFFQAFTKNGSGATLPGAGANVQTLRMRLIDALESHRD------TWPP-ACPPLEPAKLNDIDGFFTRNKAD 158 (519)
T ss_dssp CSB-SEE-EEECTTCCSCCCEEECCSSCCHHHHHHHHHHHHTTCCS------CCCT-TCCCCSBCCHHHHTTGGGSCCCS
T ss_pred ccc-CEE-EEEcCcccCCCceeEecCCCCHHHHHHHHHHHHhhccc------cCCC-CCCccCcCCHHHHHHHhccCCCC
Confidence 999 999 67764221 223346779999999999998864321 1221 11234556778888877554 45
Q ss_pred cEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCC-CCCCCcCCCeEEEEeCCCccCceEecC-CCCHH
Q 023747 168 DVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASANEH-PKLQVEEYPTLLFYPAGDKANPIKVSA-RSSSK 245 (278)
Q Consensus 168 ~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~~~-~~~~i~~~Ptl~~f~~g~~~~~~~~~g-~~~~~ 245 (278)
++++.|+... ......++..+.....+.++.++.+..++ .+|+|+.+|++++|..+++.. .+.- ..+..
T Consensus 159 ~vallF~~~~-------s~~~~~~~ldl~~~~~v~v~~v~~~~~~l~~kfgV~~~Pslvl~~~nGk~~--~~~v~~~~r~ 229 (519)
T 3t58_A 159 YLALVFERED-------SYLGREVTLDLSQYHAVAVRRVLNTESDLVNKFGVTDFPSCYLLLRNGSVS--RVPVLVESRS 229 (519)
T ss_dssp EEEEEEECTT-------CCHHHHHHHHTTTCTTEEEEEEETTCHHHHHHHTCCCSSEEEEEETTSCEE--ECCCSSCSHH
T ss_pred eEEEEecCCc-------hHHHHHHHHHhhccCCeeEEEecCchHHHHHHcCCCCCCeEEEEeCCCcee--ecccccccHH
Confidence 6677777654 22567788888765578888887554466 589999999999998776542 2332 23335
Q ss_pred HHHHHHHHHhcc
Q 023747 246 NIAAFIKEQLKE 257 (278)
Q Consensus 246 ~l~~~i~~~~~~ 257 (278)
-+..++++..+.
T Consensus 230 ~~~~~l~~l~~~ 241 (519)
T 3t58_A 230 FYTSYLRGLPGL 241 (519)
T ss_dssp HHHHHHTTSTTC
T ss_pred HHHHHHHHccCC
Confidence 566676654443
No 32
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.77 E-value=1.7e-18 Score=130.27 Aligned_cols=110 Identities=20% Similarity=0.392 Sum_probs=97.8
Q ss_pred CCCCeEEEcccchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcCCCe
Q 023747 146 TNANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPT 223 (278)
Q Consensus 146 ~~~~v~~l~~~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~~Pt 223 (278)
..+.+..++.++|++.+...+++++|+||++||++|+.+.|.+.+++..+.+ .+.|+.+|++.+ ++ .+|+|.++|+
T Consensus 15 ~~~~v~~l~~~~f~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~--~~~~~~vd~~~~~~l~~~~~v~~~Pt 92 (130)
T 2dml_A 15 SSDDVIELTPSNFNREVIQSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKD--VVKVGAVNADKHQSLGGQYGVQGFPT 92 (130)
T ss_dssp TTSSSEECCTTTHHHHTTTCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTT--TSEEEEEETTTCHHHHHHHTCCSSSE
T ss_pred CCCCcEECCHHHHHHHHhcCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcC--ceEEEEEeCCCCHHHHHHcCCCccCE
Confidence 4557999999999998877889999999999999999999999999999986 699999999988 56 5899999999
Q ss_pred EEEEeCCCccCceEecCCCCHHHHHHHHHHHhccc
Q 023747 224 LLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKEK 258 (278)
Q Consensus 224 l~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~~~~ 258 (278)
+++|.+|+.. ...+.|..+.+.|.+||.+.+...
T Consensus 93 ~~~~~~~~~~-~~~~~G~~~~~~l~~~l~~~l~~~ 126 (130)
T 2dml_A 93 IKIFGANKNK-PEDYQGGRTGEAIVDAALSALRSG 126 (130)
T ss_dssp EEEESSCTTS-CEECCSCCSHHHHHHHHHHHHHHS
T ss_pred EEEEeCCCCe-EEEeecCCCHHHHHHHHHHHHhcC
Confidence 9999888763 347899999999999999988643
No 33
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=99.77 E-value=1.4e-17 Score=137.67 Aligned_cols=192 Identities=17% Similarity=0.202 Sum_probs=151.4
Q ss_pred eeecCCceEEEEEeCccchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCceEEEEecCCcceeecC
Q 023747 33 VSQIDTLDMVYVFAKADDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFDNKAISKFLL 112 (278)
Q Consensus 33 ~~~~~~~~~v~F~~~~~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Ptl~~~~~~~~~~~~~~ 112 (278)
......+++|.||.+| |..+.+.|.++|..++ .+.|+... . .++|+++++++ |+| .+|.........|
T Consensus 23 ~l~~~~v~vVgff~~~--~~~~~~~f~~~A~~l~-~~~F~~t~---~---~~v~~~~~v~~--p~i-~lfk~~~~~~~~~ 90 (227)
T 4f9z_D 23 FIAATEVAVIGFFQDL--EIPAVPILHSMVQKFP-GVSFGIST---D---SEVLTHYNITG--NTI-CLFRLVDNEQLNL 90 (227)
T ss_dssp HHHTSSEEEEEECSCS--CSTHHHHHHHHTTTCT-TSEEEEEC---C---HHHHHHTTCCS--SEE-EEEETTTTEEEEE
T ss_pred HHhcCCeEEEEEecCC--CchhHHHHHHHHHhCC-CceEEEEC---C---HHHHHHcCCCC--CeE-EEEEecCcccccc
Confidence 3556788999999998 8899999999999995 69998743 4 68999999985 999 5665433334445
Q ss_pred C----CCCChHHHHHHHHHHhcCcccccccCCCCCCCCCCCeEEEcccchHHHhhcCCCcEEEEEECCCChhHHHHHHHH
Q 023747 113 E----SDLTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQI 188 (278)
Q Consensus 113 ~----g~~~~~~i~~fi~~~~~~~~~~~~~s~~~p~~~~~~v~~l~~~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~ 188 (278)
. |.++.++|.+|+.... ...|..++.+++.++....-...++.|+++||..|..+.+.|
T Consensus 91 ~~~~~g~~~~~~l~~fi~~~~-----------------~plv~e~t~~n~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~ 153 (227)
T 4f9z_D 91 EDEDIESIDATKLSRFIEINS-----------------LHMVTEYNPVTVIGLFNSVIQIHLLLIMNKASPEYEENMHRY 153 (227)
T ss_dssp CHHHHHTCCHHHHHHHHHHHC-----------------CCSEEECCHHHHHHHHHSSCCEEEEEEECTTSTTHHHHHHHH
T ss_pred cccccCCCCHHHHHHHHHHhC-----------------CCceeecCcccHHHHhccCCceEEEEEEcCCcchHHHHHHHH
Confidence 6 4799999999999863 224899999999998744445556678899999999999999
Q ss_pred HHHHHHhcCCCceEEEEEeCCCC---CC-CCCCCc--CCCeEEEEeCCCccCceEe-cCCCCHHHHHHHHHHHhc
Q 023747 189 EKLAKHFKGLDNLVIAKIDASAN---EH-PKLQVE--EYPTLLFYPAGDKANPIKV-SARSSSKNIAAFIKEQLK 256 (278)
Q Consensus 189 ~~~a~~~~~~~~~~~~~vd~~~~---~~-~~~~i~--~~Ptl~~f~~g~~~~~~~~-~g~~~~~~l~~~i~~~~~ 256 (278)
+++|+.+++ ++.|+.+|++.. .. ..+++. .+|++.++..++.. .+.+ .+..+.++|.+|+.+.+.
T Consensus 154 ~~vAk~~k~--~i~F~~vd~~~~~~~~~l~~fgl~~~~~P~~~i~~~~~~~-ky~~~~~~~t~~~i~~Fv~~~~~ 225 (227)
T 4f9z_D 154 QKAAKLFQG--KILFILVDSGMKENGKVISFFKLKESQLPALAIYQTLDDE-WDTLPTAEVSVEHVQNFCDGFLS 225 (227)
T ss_dssp HHHHHHTTT--TCEEEEEETTSGGGHHHHHHTTCCGGGCSEEEEEESSSCC-EEEETTCCCCHHHHHHHHHHHHT
T ss_pred HHHHHHhhC--CEEEEEeCCccHhHHHHHHHcCCCcccCCEEEEEECCCCc-cccCCcCCCCHHHHHHHHHHHhC
Confidence 999999998 799999999753 22 467777 89999999854432 2334 378999999999988763
No 34
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.77 E-value=3.2e-18 Score=124.06 Aligned_cols=102 Identities=25% Similarity=0.498 Sum_probs=92.0
Q ss_pred CeEEEcccchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcCCCeEEE
Q 023747 149 NVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTLLF 226 (278)
Q Consensus 149 ~v~~l~~~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~~Ptl~~ 226 (278)
.+..++.++|.+.+...+++++|+||++||++|+.+.|.+.+++..+.+ ++.|+.+|++.+ ++ .+|++.++|++++
T Consensus 3 ~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 80 (107)
T 2i4a_A 3 HTLAVSDSSFDQDVLKASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAG--KVTVAKVNIDDNPETPNAYQVRSIPTLML 80 (107)
T ss_dssp CEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTT--SEEEEEEETTTCCHHHHHTTCCSSSEEEE
T ss_pred ceeecchhhhhHHHHhCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCC--cEEEEEEECCCCHHHHHhcCCCccCEEEE
Confidence 5889999999988877889999999999999999999999999999986 699999999988 45 5899999999999
Q ss_pred EeCCCccCceEecCCCCHHHHHHHHHHH
Q 023747 227 YPAGDKANPIKVSARSSSKNIAAFIKEQ 254 (278)
Q Consensus 227 f~~g~~~~~~~~~g~~~~~~l~~~i~~~ 254 (278)
|++|+... ++.|..+.+.|.+||+++
T Consensus 81 ~~~G~~~~--~~~G~~~~~~l~~~l~~~ 106 (107)
T 2i4a_A 81 VRDGKVID--KKVGALPKSQLKAWVESA 106 (107)
T ss_dssp EETTEEEE--EEESCCCHHHHHHHHHHT
T ss_pred EeCCEEEE--EecCCCCHHHHHHHHHhc
Confidence 98887653 688999999999999875
No 35
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.77 E-value=1.6e-18 Score=130.87 Aligned_cols=109 Identities=21% Similarity=0.485 Sum_probs=96.9
Q ss_pred CCCCeEEEcccchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhc----CCCceEEEEEeCCCC-CC-CCCCCc
Q 023747 146 TNANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFK----GLDNLVIAKIDASAN-EH-PKLQVE 219 (278)
Q Consensus 146 ~~~~v~~l~~~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~----~~~~~~~~~vd~~~~-~~-~~~~i~ 219 (278)
....+..++.++|.+.+...+++++|+||++||++|+.+.|.+.+++..+. + ++.|+.+|++.+ ++ .+|+|.
T Consensus 5 ~~~~v~~l~~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~--~~~~~~vd~~~~~~l~~~~~v~ 82 (133)
T 1x5d_A 5 SSGDVIELTDDSFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKG--KVKLAAVDATVNQVLASRYGIR 82 (133)
T ss_dssp SCCSCEECCTTHHHHHTTTSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTT--SEEEEEEETTTCCHHHHHHTCC
T ss_pred CCCcCEEcCHhhHHHHHhcCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCC--cEEEEEEECCCCHHHHHhCCCC
Confidence 345689999999999887788999999999999999999999999999997 4 699999999988 55 589999
Q ss_pred CCCeEEEEeCCCccCceEecCCCCHHHHHHHHHHHhccc
Q 023747 220 EYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKEK 258 (278)
Q Consensus 220 ~~Ptl~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~~~~ 258 (278)
++|++++|++|+.. .+|.|..+.+.|.+||.++++..
T Consensus 83 ~~Pt~~~~~~g~~~--~~~~G~~~~~~l~~~l~~~~~~~ 119 (133)
T 1x5d_A 83 GFPTIKIFQKGESP--VDYDGGRTRSDIVSRALDLFSDN 119 (133)
T ss_dssp SSSEEEEEETTEEE--EEECSCCSHHHHHHHHHHHHHHH
T ss_pred eeCeEEEEeCCCce--EEecCCCCHHHHHHHHHHHhhcc
Confidence 99999999987743 37899999999999999998653
No 36
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.77 E-value=3.5e-18 Score=125.16 Aligned_cols=104 Identities=23% Similarity=0.481 Sum_probs=93.7
Q ss_pred CeEEEcccchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcCCCeEEE
Q 023747 149 NVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTLLF 226 (278)
Q Consensus 149 ~v~~l~~~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~~Ptl~~ 226 (278)
.|..++.++|.+.+.+.+++++|.||++||++|+.+.|.+.+++..+.+ ++.++.+|++.+ ++ .+|++.++|++++
T Consensus 6 ~v~~l~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 83 (112)
T 1t00_A 6 TLKHVTDDSFEQDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGD--KIEIVKLNIDENPGTAAKYGVMSIPTLNV 83 (112)
T ss_dssp CCEEECTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred eEEecchhhHHHHHhhCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcC--CeEEEEEEcCCCHHHHHhCCCCcccEEEE
Confidence 5789999999988877889999999999999999999999999999976 699999999988 55 5899999999999
Q ss_pred EeCCCccCceEecCCCCHHHHHHHHHHHhc
Q 023747 227 YPAGDKANPIKVSARSSSKNIAAFIKEQLK 256 (278)
Q Consensus 227 f~~g~~~~~~~~~g~~~~~~l~~~i~~~~~ 256 (278)
|++|+... ++.|..+.+.|.+||++.+.
T Consensus 84 ~~~G~~~~--~~~G~~~~~~l~~~l~~~l~ 111 (112)
T 1t00_A 84 YQGGEVAK--TIVGAKPKAAIVRDLEDFIA 111 (112)
T ss_dssp EETTEEEE--EEESCCCHHHHHHHTHHHHC
T ss_pred EeCCEEEE--EEeCCCCHHHHHHHHHHHhh
Confidence 99887653 78899999999999998764
No 37
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.76 E-value=2.8e-18 Score=125.23 Aligned_cols=103 Identities=28% Similarity=0.511 Sum_probs=92.0
Q ss_pred CCeEEEcccchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCC-CceEEEEEeCCCC-CC-CCCCCcCCCeE
Q 023747 148 ANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGL-DNLVIAKIDASAN-EH-PKLQVEEYPTL 224 (278)
Q Consensus 148 ~~v~~l~~~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~-~~~~~~~vd~~~~-~~-~~~~i~~~Ptl 224 (278)
+.+..++.++|++.+. +++++|+||++||++|+.+.|.+.++++.+... .++.++.+|++.+ ++ .+|++.++|++
T Consensus 5 ~~v~~l~~~~~~~~~~--~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~ 82 (111)
T 3uvt_A 5 STVLALTENNFDDTIA--EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGYPTL 82 (111)
T ss_dssp CCSEECCTTTHHHHHH--SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred CcceEcChhhHHHHhc--CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHhHHHhcCCCcccEE
Confidence 4689999999999986 779999999999999999999999999998643 3699999999988 56 58999999999
Q ss_pred EEEeCCCccCceEecCCCCHHHHHHHHHHH
Q 023747 225 LFYPAGDKANPIKVSARSSSKNIAAFIKEQ 254 (278)
Q Consensus 225 ~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~ 254 (278)
++|++|+... ++.|..+.+.|.+||+++
T Consensus 83 ~~~~~g~~~~--~~~g~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 83 LLFRGGKKVS--EHSGGRDLDSLHRFVLSQ 110 (111)
T ss_dssp EEEETTEEEE--EECSCCSHHHHHHHHHHH
T ss_pred EEEeCCcEEE--eccCCcCHHHHHHHHHhc
Confidence 9999887654 789999999999999876
No 38
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.76 E-value=2.6e-18 Score=131.01 Aligned_cols=112 Identities=29% Similarity=0.533 Sum_probs=98.1
Q ss_pred CCCCeEEEcccchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCC-ceEEEEEeCCCC-CC-CCCCCcCCC
Q 023747 146 TNANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLD-NLVIAKIDASAN-EH-PKLQVEEYP 222 (278)
Q Consensus 146 ~~~~v~~l~~~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~-~~~~~~vd~~~~-~~-~~~~i~~~P 222 (278)
....|..++.++|++.+ ..++.++|+||++||++|+.+.|.|.+++..+.+.. ++.|+.+|++.+ ++ .+|+|..+|
T Consensus 15 ~~~~v~~l~~~~~~~~~-~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P 93 (140)
T 2dj1_A 15 EENGVWVLNDGNFDNFV-ADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASKFDVSGYP 93 (140)
T ss_dssp EETTEEECCTTTHHHHH-TTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCHHHHHHTTCCSSS
T ss_pred CCCCCEEcChHhHHHHH-hcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccHHHHHHCCCCccC
Confidence 45679999999999987 457899999999999999999999999999997632 499999999988 56 589999999
Q ss_pred eEEEEeCCCccCceEecCCCCHHHHHHHHHHHhcccCCC
Q 023747 223 TLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKEKDQS 261 (278)
Q Consensus 223 tl~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~~~~~~~ 261 (278)
++++|++|+ . ..|.|..+.+.|.+||++++++....
T Consensus 94 t~~~~~~G~-~--~~~~g~~~~~~l~~~l~~~~~~~~~~ 129 (140)
T 2dj1_A 94 TIKILKKGQ-A--VDYDGSRTQEEIVAKVREVSQPDWTP 129 (140)
T ss_dssp EEEEEETTE-E--EECCSCCCHHHHHHHHHHHHSSSCCC
T ss_pred eEEEEECCc-E--EEcCCCCCHHHHHHHHHHhcCCCCCC
Confidence 999998887 3 37899999999999999999876543
No 39
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.76 E-value=2e-18 Score=131.99 Aligned_cols=107 Identities=21% Similarity=0.347 Sum_probs=96.9
Q ss_pred CCCeEEEcccchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcCCCeE
Q 023747 147 NANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTL 224 (278)
Q Consensus 147 ~~~v~~l~~~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~~Ptl 224 (278)
...+..++.++|.+.+...+++++|+||++||++|+.+.|.+.++++.+.+ ++.|+.||++.+ ++ .+|+|.++|++
T Consensus 5 ~~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~ 82 (140)
T 3hz4_A 5 GSSIIEFEDMTWSQQVEDSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGS--SAVFGRINIATNPWTAEKYGVQGTPTF 82 (140)
T ss_dssp TTTEEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT--TSEEEEEETTTCHHHHHHHTCCEESEE
T ss_pred CcceEEcchHhHHHHHHhCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCC--ceEEEEEECCcCHhHHHHCCCCcCCEE
Confidence 446899999999977778899999999999999999999999999999987 699999999988 56 58999999999
Q ss_pred EEEeCCCccCceEecCCCCHHHHHHHHHHHhcc
Q 023747 225 LFYPAGDKANPIKVSARSSSKNIAAFIKEQLKE 257 (278)
Q Consensus 225 ~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~~~ 257 (278)
++|++|+.+. ++.|..+.+.|.+||++.++.
T Consensus 83 ~~~~~G~~~~--~~~G~~~~~~l~~~l~~~l~~ 113 (140)
T 3hz4_A 83 KFFCHGRPVW--EQVGQIYPSILKNAVRDMLQH 113 (140)
T ss_dssp EEEETTEEEE--EEESSCCHHHHHHHHHHHHHH
T ss_pred EEEeCCcEEE--EEcCCCCHHHHHHHHHHHhcc
Confidence 9999887653 789999999999999999864
No 40
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.76 E-value=5.2e-18 Score=124.59 Aligned_cols=105 Identities=22% Similarity=0.424 Sum_probs=94.6
Q ss_pred CCeEEEcccchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcCCCeEE
Q 023747 148 ANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTLL 225 (278)
Q Consensus 148 ~~v~~l~~~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~~Ptl~ 225 (278)
+.|..++.++|.+.+...+++++|+||++||++|+.+.|.+++++..+.+ ++.|+.+|++.+ ++ .+|++.++|+++
T Consensus 7 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~--~v~~~~v~~~~~~~~~~~~~v~~~Pt~~ 84 (115)
T 1thx_A 7 KGVITITDAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSD--RLKVVKLEIDPNPTTVKKYKVEGVPALR 84 (115)
T ss_dssp CSEEECCGGGHHHHTTTCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT--TCEEEEEESTTCHHHHHHTTCCSSSEEE
T ss_pred CceEEeeccchhhHhhcCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCC--cEEEEEEEcCCCHHHHHHcCCCceeEEE
Confidence 35899999999998877889999999999999999999999999999986 699999999988 55 589999999999
Q ss_pred EEeCCCccCceEecCCCCHHHHHHHHHHHhc
Q 023747 226 FYPAGDKANPIKVSARSSSKNIAAFIKEQLK 256 (278)
Q Consensus 226 ~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~~ 256 (278)
+|++|+... ++.|..+.+.|.+||++.++
T Consensus 85 ~~~~G~~~~--~~~g~~~~~~l~~~l~~~l~ 113 (115)
T 1thx_A 85 LVKGEQILD--STEGVISKDKLLSFLDTHLN 113 (115)
T ss_dssp EEETTEEEE--EEESCCCHHHHHHHHHHHHC
T ss_pred EEcCCEEEE--EecCCCCHHHHHHHHHHHhc
Confidence 998887653 68899999999999998876
No 41
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.76 E-value=3.9e-18 Score=132.73 Aligned_cols=106 Identities=17% Similarity=0.441 Sum_probs=94.8
Q ss_pred CCCeEEEcccchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcCCCeE
Q 023747 147 NANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTL 224 (278)
Q Consensus 147 ~~~v~~l~~~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~~Ptl 224 (278)
.+.+..++..+|.+.+ ..+++++|+||++||++|+.+.|.|+++++.+.+ ++.|+.+|++.+ ++ .+|+|.++|++
T Consensus 46 ~~~~~~l~~~~f~~~~-~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~--~v~~~~vd~~~~~~l~~~~~i~~~Pt~ 122 (155)
T 2ppt_A 46 TGKVAGIDPAILARAE-RDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAG--QVRLAKIDTQAHPAVAGRHRIQGIPAF 122 (155)
T ss_dssp CSSEEECCHHHHHHHT-TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT--TCEEEEEETTTSTHHHHHTTCCSSSEE
T ss_pred CCCCccCCHHHHHHHH-hCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccC--CEEEEEEeCCccHHHHHHcCCCcCCEE
Confidence 3457889999999988 7788999999999999999999999999999987 699999999988 55 58999999999
Q ss_pred EEEeCCCccCceEecCCCCHHHHHHHHHHHhcc
Q 023747 225 LFYPAGDKANPIKVSARSSSKNIAAFIKEQLKE 257 (278)
Q Consensus 225 ~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~~~ 257 (278)
++|++|+.+. ++.|..+.+.|.+||++.++.
T Consensus 123 ~~~~~G~~~~--~~~G~~~~~~l~~~l~~~l~~ 153 (155)
T 2ppt_A 123 ILFHKGRELA--RAAGARPASELVGFVRGKLGA 153 (155)
T ss_dssp EEEETTEEEE--EEESCCCHHHHHHHHHHHHC-
T ss_pred EEEeCCeEEE--EecCCCCHHHHHHHHHHHhcc
Confidence 9999887654 789999999999999998875
No 42
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.76 E-value=4.2e-18 Score=123.60 Aligned_cols=102 Identities=22% Similarity=0.511 Sum_probs=92.1
Q ss_pred eEEEcccchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcCCCeEEEE
Q 023747 150 VQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTLLFY 227 (278)
Q Consensus 150 v~~l~~~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~~Ptl~~f 227 (278)
|..++.++|.+.+...+++++|.||++||++|+.+.|.+.+++..+.+ ++.++.+|++.+ ++ .+|++.++|++++|
T Consensus 3 v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 80 (107)
T 1dby_A 3 AGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKD--KLKCVKLNTDESPNVASEYGIRSIPTIMVF 80 (107)
T ss_dssp CEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHHHHHTCCSSCEEEEE
T ss_pred cEeccHHHHHHHHhcCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCC--ceEEEEEECCCCHHHHHHCCCCcCCEEEEE
Confidence 678999999998877889999999999999999999999999999986 699999999988 56 58999999999999
Q ss_pred eCCCccCceEecCCCCHHHHHHHHHHHh
Q 023747 228 PAGDKANPIKVSARSSSKNIAAFIKEQL 255 (278)
Q Consensus 228 ~~g~~~~~~~~~g~~~~~~l~~~i~~~~ 255 (278)
++|+... ++.|..+.+.+.++|++.+
T Consensus 81 ~~G~~~~--~~~G~~~~~~l~~~l~~~l 106 (107)
T 1dby_A 81 KGGKKCE--TIIGAVPKATIVQTVEKYL 106 (107)
T ss_dssp SSSSEEE--EEESCCCHHHHHHHHHHHC
T ss_pred eCCEEEE--EEeCCCCHHHHHHHHHHHh
Confidence 8887653 7889999999999998875
No 43
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.76 E-value=5.9e-18 Score=122.97 Aligned_cols=103 Identities=20% Similarity=0.486 Sum_probs=92.8
Q ss_pred CCeEEEcccchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcCCCeEE
Q 023747 148 ANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTLL 225 (278)
Q Consensus 148 ~~v~~l~~~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~~Ptl~ 225 (278)
..+..++.++|++.+ ..+++++|+||++||++|+.+.|.+.+++..+.+ ++.|+.+|++.+ ++ .+|++.++|+++
T Consensus 4 ~~v~~l~~~~~~~~~-~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~i~~~Pt~~ 80 (109)
T 3tco_A 4 DVTLVLTEENFDEVI-RNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKG--KAVFGRLNVDENQKIADKYSVLNIPTTL 80 (109)
T ss_dssp CCCEECCTTTHHHHH-HHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TSEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred CeEEEecHHHHHHHH-hcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCC--CceEEEEccccCHHHHHhcCcccCCEEE
Confidence 458899999999987 4589999999999999999999999999999987 699999999988 56 589999999999
Q ss_pred EEeCCCccCceEecCCCCHHHHHHHHHHHh
Q 023747 226 FYPAGDKANPIKVSARSSSKNIAAFIKEQL 255 (278)
Q Consensus 226 ~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~ 255 (278)
+|++|+... ++.|..+.+.|.+||++++
T Consensus 81 ~~~~g~~~~--~~~g~~~~~~l~~~l~~~l 108 (109)
T 3tco_A 81 IFVNGQLVD--SLVGAVDEDTLESTVNKYL 108 (109)
T ss_dssp EEETTEEEE--EEESCCCHHHHHHHHHHHC
T ss_pred EEcCCcEEE--eeeccCCHHHHHHHHHHHh
Confidence 998887654 7899999999999999875
No 44
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.76 E-value=3.2e-18 Score=127.32 Aligned_cols=108 Identities=25% Similarity=0.490 Sum_probs=94.1
Q ss_pred CCeEEEcccchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcCCCeEE
Q 023747 148 ANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTLL 225 (278)
Q Consensus 148 ~~v~~l~~~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~~Ptl~ 225 (278)
+.+..++.++|.+.+...+++++|+||++||++|+.+.|.+.+++..+.+ ++.|+.+|++.+ ++ .+|++.++|+++
T Consensus 3 ~~v~~l~~~~f~~~~~~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~Pt~~ 80 (122)
T 3aps_A 3 QASIDLTPQTFNEKVLQGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKG--KVRAGKVDCQAYPQTCQKAGIKAYPSVK 80 (122)
T ss_dssp CCSEECCHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT--TCEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred cchhcCCHHHHHHHHhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC--CeEEEEEeCcCCHHHHHHcCCCccceEE
Confidence 35889999999877777889999999999999999999999999999987 699999999988 56 589999999999
Q ss_pred EEeCCCccCceEecCC----CCHHHHHHHHHHHhcccC
Q 023747 226 FYPAGDKANPIKVSAR----SSSKNIAAFIKEQLKEKD 259 (278)
Q Consensus 226 ~f~~g~~~~~~~~~g~----~~~~~l~~~i~~~~~~~~ 259 (278)
+|++|+... ++.|. .+.+.|.+||.+.++...
T Consensus 81 ~~~~~~~~~--~~~g~~~~~~~~~~l~~~l~~~l~~~~ 116 (122)
T 3aps_A 81 LYQYERAKK--SIWEEQINSRDAKTIAALIYGKLETLQ 116 (122)
T ss_dssp EEEEEGGGT--EEEEEEECCSCHHHHHHHHHHHHHCC-
T ss_pred EEeCCCccc--eeeccccCcCCHHHHHHHHHHHHHhhh
Confidence 998777654 56664 899999999999886543
No 45
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.76 E-value=3.5e-19 Score=134.52 Aligned_cols=105 Identities=11% Similarity=0.165 Sum_probs=94.6
Q ss_pred CeEEEcccchHHHhhcCCCcEEEEEECCC--ChhHHHHHHHHHHHHHHhcCCCc-eEEEEEeCCCC-CC-CCCCCcCCCe
Q 023747 149 NVQIVVGKTFDDLVLNSHKDVLLEVYTPW--CVTCETTSKQIEKLAKHFKGLDN-LVIAKIDASAN-EH-PKLQVEEYPT 223 (278)
Q Consensus 149 ~v~~l~~~~~~~~i~~~~~~~~v~f~~~~--c~~c~~~~~~~~~~a~~~~~~~~-~~~~~vd~~~~-~~-~~~~i~~~Pt 223 (278)
.+..++.++|++.+. .+++++|.||++| |++|+.+.|.+++++.+|.+ + +.|++||++++ ++ .+|+|.++||
T Consensus 18 g~~~~t~~~F~~~v~-~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g--~~v~~~KVdvDe~~~lA~~ygV~sIPT 94 (140)
T 2qgv_A 18 GWTPVSESRLDDWLT-QAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPD--YTWQVAIADLEQSEAIGDRFGAFRFPA 94 (140)
T ss_dssp TCEECCHHHHHHHHH-TCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTT--SCCEEEECCHHHHHHHHHHHTCCSSSE
T ss_pred CCccCCHHHHHHHHh-CCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCC--CeEEEEEEECCCCHHHHHHcCCccCCE
Confidence 367899999999994 7788999999999 99999999999999999987 7 99999999998 67 5999999999
Q ss_pred EEEEeCCCccCceEecCCCCHHHHHHHHHHHhccc
Q 023747 224 LLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKEK 258 (278)
Q Consensus 224 l~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~~~~ 258 (278)
+++|++|+.+. +..|..+.+.|.+||++++...
T Consensus 95 lilFk~G~~v~--~~~G~~~k~~l~~~i~~~l~~~ 127 (140)
T 2qgv_A 95 TLVFTGGNYRG--VLNGIHPWAELINLMRGLVEPQ 127 (140)
T ss_dssp EEEEETTEEEE--EEESCCCHHHHHHHHHHHHC--
T ss_pred EEEEECCEEEE--EEecCCCHHHHHHHHHHHhcCC
Confidence 99999999876 7899999999999999988543
No 46
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.75 E-value=6.4e-18 Score=130.26 Aligned_cols=107 Identities=18% Similarity=0.466 Sum_probs=97.0
Q ss_pred CCCeEEEcccchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcCCCeE
Q 023747 147 NANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTL 224 (278)
Q Consensus 147 ~~~v~~l~~~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~~Ptl 224 (278)
.+.+..++.++|.+.+ ..+++++|+||++||++|+.+.|.|+++++.+.+ ++.|+.||++.+ ++ .+|+|.++|++
T Consensus 37 ~~~v~~l~~~~~~~~~-~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~--~~~~~~vd~~~~~~l~~~~~v~~~Pt~ 113 (148)
T 3p2a_A 37 DGEVINATAETLDKLL-QDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAG--KVRFVKVNTEAEPALSTRFRIRSIPTI 113 (148)
T ss_dssp CCCCEECCTTTHHHHT-TCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred cCCceecCHHHHHHHH-hcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCC--ceEEEEEECcCCHHHHHHCCCCccCEE
Confidence 4568999999999988 7789999999999999999999999999999976 699999999998 55 58999999999
Q ss_pred EEEeCCCccCceEecCCCCHHHHHHHHHHHhccc
Q 023747 225 LFYPAGDKANPIKVSARSSSKNIAAFIKEQLKEK 258 (278)
Q Consensus 225 ~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~~~~ 258 (278)
++|++|+.+. ++.|..+.+.|.+||+++++..
T Consensus 114 ~~~~~G~~~~--~~~G~~~~~~l~~~l~~~l~~~ 145 (148)
T 3p2a_A 114 MLYRNGKMID--MLNGAVPKAPFDNWLDEQLSRD 145 (148)
T ss_dssp EEEETTEEEE--EESSCCCHHHHHHHHHHHHHSC
T ss_pred EEEECCeEEE--EEeCCCCHHHHHHHHHHHhccc
Confidence 9999887654 7899999999999999998754
No 47
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.75 E-value=5.8e-18 Score=125.37 Aligned_cols=101 Identities=16% Similarity=0.255 Sum_probs=86.6
Q ss_pred CCeEEEcccchHHHhhcCCC--cEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCCCCCCCcCCCeEE
Q 023747 148 ANVQIVVGKTFDDLVLNSHK--DVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASANEHPKLQVEEYPTLL 225 (278)
Q Consensus 148 ~~v~~l~~~~~~~~i~~~~~--~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~~~~~~~i~~~Ptl~ 225 (278)
+.+..++.++|.+.+.+.++ +++|+||++||++|+.+.|.++++|..+. ++.|++||+++. ..+|+|.++||++
T Consensus 3 G~v~~it~~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~---~v~f~kvd~d~~-~~~~~v~~~PT~~ 78 (118)
T 3evi_A 3 GELREISGNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFP---ETKFVKAIVNSC-IQHYHDNCLPTIF 78 (118)
T ss_dssp CSCEECCGGGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCT---TSEEEEEEGGGT-STTCCGGGCSEEE
T ss_pred cceEEeCHHHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCC---CCEEEEEEhHHh-HHHCCCCCCCEEE
Confidence 35788899999998876654 89999999999999999999999999986 489999999875 4689999999999
Q ss_pred EEeCCCccCceEecC-------CCCHHHHHHHHHHH
Q 023747 226 FYPAGDKANPIKVSA-------RSSSKNIAAFIKEQ 254 (278)
Q Consensus 226 ~f~~g~~~~~~~~~g-------~~~~~~l~~~i~~~ 254 (278)
+|++|+.+. ++.| ..+.++|..+|.++
T Consensus 79 ~fk~G~~v~--~~~G~~~~gg~~~~~~~le~~L~~~ 112 (118)
T 3evi_A 79 VYKNGQIEA--KFIGIIECGGINLKLEELEWKLAEV 112 (118)
T ss_dssp EEETTEEEE--EEESTTTTTCSSCCHHHHHHHHHTT
T ss_pred EEECCEEEE--EEeChhhhCCCCCCHHHHHHHHHHc
Confidence 999998775 4554 35789999998653
No 48
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.75 E-value=4.5e-18 Score=123.05 Aligned_cols=101 Identities=26% Similarity=0.464 Sum_probs=91.3
Q ss_pred CeEEEcccchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcCCCeEEE
Q 023747 149 NVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTLLF 226 (278)
Q Consensus 149 ~v~~l~~~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~~Ptl~~ 226 (278)
.+..++.++|++.+ .+++++|+||++||++|+.+.|.+.++++.+.+ ++.++.+|++.+ ++ .+|++.++|++++
T Consensus 4 ~v~~l~~~~~~~~~--~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 79 (106)
T 3die_A 4 AIVKVTDADFDSKV--ESGVQLVDFWATACGPCKMIAPVLEELAADYEG--KADILKLDVDENPSTAAKYEVMSIPTLIV 79 (106)
T ss_dssp CCEECCTTTHHHHS--CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHHHHTTCCSBSEEEE
T ss_pred ceEECCHHHHHHHh--cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcC--CcEEEEEECCcCHHHHHhCCCcccCEEEE
Confidence 47889999999988 789999999999999999999999999999987 699999999998 55 5899999999999
Q ss_pred EeCCCccCceEecCCCCHHHHHHHHHHHh
Q 023747 227 YPAGDKANPIKVSARSSSKNIAAFIKEQL 255 (278)
Q Consensus 227 f~~g~~~~~~~~~g~~~~~~l~~~i~~~~ 255 (278)
|++|+... ++.|..+.+.|.+||++++
T Consensus 80 ~~~G~~~~--~~~g~~~~~~l~~~l~~~l 106 (106)
T 3die_A 80 FKDGQPVD--KVVGFQPKENLAEVLDKHL 106 (106)
T ss_dssp EETTEEEE--EEESCCCHHHHHHHHHTTC
T ss_pred EeCCeEEE--EEeCCCCHHHHHHHHHHhC
Confidence 99887654 7899999999999998653
No 49
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.75 E-value=3.3e-18 Score=126.46 Aligned_cols=111 Identities=27% Similarity=0.568 Sum_probs=96.9
Q ss_pred CCCeEEEcccchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCC-ceEEEEEeCCCC-CC-CCCCCcCCCe
Q 023747 147 NANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLD-NLVIAKIDASAN-EH-PKLQVEEYPT 223 (278)
Q Consensus 147 ~~~v~~l~~~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~-~~~~~~vd~~~~-~~-~~~~i~~~Pt 223 (278)
.+.|..++.++|++.+ ..+++++|+||++||++|+.+.|.+.+++..+.... ++.++.+|++.+ ++ .+|++.++|+
T Consensus 6 ~~~v~~l~~~~~~~~~-~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt 84 (120)
T 1mek_A 6 EDHVLVLRKSNFAEAL-AAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRGYPT 84 (120)
T ss_dssp ETTEEECCTTTHHHHH-HHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCCSSHHHHTCCSSSE
T ss_pred CCCcEEechhhHHHHH-ccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCHHHHHHCCCCcccE
Confidence 4568999999999977 467899999999999999999999999999997532 699999999988 66 5899999999
Q ss_pred EEEEeCCCccCceEecCCCCHHHHHHHHHHHhccc
Q 023747 224 LLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKEK 258 (278)
Q Consensus 224 l~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~~~~ 258 (278)
+++|++|+...+..+.|..+.+.|.+||++++++.
T Consensus 85 ~~~~~~g~~~~~~~~~g~~~~~~l~~~l~~~~~~~ 119 (120)
T 1mek_A 85 IKFFRNGDTASPKEYTAGREADDIVNWLKKRTGPA 119 (120)
T ss_dssp EEEEESSCSSSCEECCCCSSHHHHHHHHHTTSCCC
T ss_pred EEEEeCCCcCCcccccCccCHHHHHHHHHhccCCC
Confidence 99999888653458999999999999999988754
No 50
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.75 E-value=8e-18 Score=121.51 Aligned_cols=102 Identities=24% Similarity=0.568 Sum_probs=91.3
Q ss_pred eEEEcccchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcCCCeEEEE
Q 023747 150 VQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTLLFY 227 (278)
Q Consensus 150 v~~l~~~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~~Ptl~~f 227 (278)
|..++.++|.+.+...+++++|+||++||++|+.+.|.+.+++..+.+ ++.++.+|++.+ ++ .+|++.++|++++|
T Consensus 2 v~~~~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 79 (105)
T 1fb6_A 2 VQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSG--KIAVYKLNTDEAPGIATQYNIRSIPTVLFF 79 (105)
T ss_dssp CEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred ceechhhhHHHHHhcCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcC--ceEEEEEcCcchHHHHHhCCCCcccEEEEE
Confidence 678899999998877789999999999999999999999999999986 699999999988 55 58999999999999
Q ss_pred eCCCccCceEecCCCCHHHHHHHHHHHh
Q 023747 228 PAGDKANPIKVSARSSSKNIAAFIKEQL 255 (278)
Q Consensus 228 ~~g~~~~~~~~~g~~~~~~l~~~i~~~~ 255 (278)
++|+... ++.|..+.+.+.+||++.+
T Consensus 80 ~~g~~~~--~~~G~~~~~~l~~~l~~~l 105 (105)
T 1fb6_A 80 KNGERKE--SIIGAVPKSTLTDSIEKYL 105 (105)
T ss_dssp ETTEEEE--EEEECCCHHHHHHHHHHHC
T ss_pred eCCeEEE--EEecCCCHHHHHHHHHhhC
Confidence 9887653 6889999999999998763
No 51
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.75 E-value=1.8e-17 Score=125.89 Aligned_cols=110 Identities=25% Similarity=0.456 Sum_probs=96.0
Q ss_pred CCCCeEEEcccchHHHhhc-----------CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC
Q 023747 146 TNANVQIVVGKTFDDLVLN-----------SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH 213 (278)
Q Consensus 146 ~~~~v~~l~~~~~~~~i~~-----------~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~ 213 (278)
....+..++.++|.+.+.+ .+++++|.||++||++|+.+.|.+.+++..+.+ ++.|+.+|++.+ ++
T Consensus 7 ~~~~v~~l~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~--~v~~~~vd~~~~~~l 84 (136)
T 2l5l_A 7 GNGKVIHLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDG--QIVIYKVDTEKEQEL 84 (136)
T ss_dssp CTTSEEEECHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHH
T ss_pred cCCceEEecchHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcC--CEEEEEEeCCCCHHH
Confidence 3456899999999998864 468999999999999999999999999999986 699999999988 56
Q ss_pred -CCCCCcCCCeEEEE-eCCCccCceEecCCCCHHHHHHHHHHHhcccCC
Q 023747 214 -PKLQVEEYPTLLFY-PAGDKANPIKVSARSSSKNIAAFIKEQLKEKDQ 260 (278)
Q Consensus 214 -~~~~i~~~Ptl~~f-~~g~~~~~~~~~g~~~~~~l~~~i~~~~~~~~~ 260 (278)
.+|++.++|++++| ++|+. +.+.|..+.+.|.+||++.++....
T Consensus 85 ~~~~~v~~~Pt~~~~~~~G~~---~~~~G~~~~~~l~~~l~~~~~~~~~ 130 (136)
T 2l5l_A 85 AGAFGIRSIPSILFIPMEGKP---EMAQGAMPKASFKKAIDEFLLKKEG 130 (136)
T ss_dssp HHHTTCCSSCEEEEECSSSCC---EEEESCCCHHHHHHHHHHHHTSCTT
T ss_pred HHHcCCCCCCEEEEECCCCcE---EEEeCCCCHHHHHHHHHHHhhccCC
Confidence 58999999999999 66653 3689999999999999999876544
No 52
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.74 E-value=7.6e-18 Score=128.60 Aligned_cols=107 Identities=19% Similarity=0.432 Sum_probs=93.4
Q ss_pred CCCCeEEEcccchHHHhhc-----------CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC
Q 023747 146 TNANVQIVVGKTFDDLVLN-----------SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH 213 (278)
Q Consensus 146 ~~~~v~~l~~~~~~~~i~~-----------~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~ 213 (278)
....+..++..+|...+.+ .+++++|+||++||++|+.+.|.+.+++..+.+ ++.|+.||++.+ ++
T Consensus 20 ~~~~v~~l~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~ 97 (141)
T 3hxs_A 20 PQSGTIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAG--KIYIYKVNVDKEPEL 97 (141)
T ss_dssp ---CCEECCHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHH
T ss_pred CCCCcccccHHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcC--ceEEEEEECCCCHHH
Confidence 4557899999999998876 478999999999999999999999999999987 699999999998 66
Q ss_pred -CCCCCcCCCeEEEEeCCCccCceEecCCCCHHHHHHHHHHHhc
Q 023747 214 -PKLQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLK 256 (278)
Q Consensus 214 -~~~~i~~~Ptl~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~~ 256 (278)
.+|+|.++|++++|..++.+ +.+.|..+.+.|.+||.+.+.
T Consensus 98 ~~~~~v~~~Pt~~~~~~~g~~--~~~~G~~~~~~l~~~l~~~l~ 139 (141)
T 3hxs_A 98 ARDFGIQSIPTIWFVPMKGEP--QVNMGALSKEQLKGYIDKVLL 139 (141)
T ss_dssp HHHTTCCSSSEEEEECSSSCC--EEEESCCCHHHHHHHHHHTTC
T ss_pred HHHcCCCCcCEEEEEeCCCCE--EEEeCCCCHHHHHHHHHHHHc
Confidence 58999999999999655554 378999999999999998875
No 53
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.74 E-value=4.6e-18 Score=126.18 Aligned_cols=107 Identities=23% Similarity=0.475 Sum_probs=94.1
Q ss_pred CCCCeEEEcccchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcCCCe
Q 023747 146 TNANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPT 223 (278)
Q Consensus 146 ~~~~v~~l~~~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~~Pt 223 (278)
....+..++.++|.+.+...+++++|+||++||++|+.+.|.+.+++..+.+ ++.|+.+|++.+ ++ .+|++.++|+
T Consensus 10 ~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~i~~~Pt 87 (121)
T 2i1u_A 10 EKSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERAT--DLTVAKLDVDTNPETARNFQVVSIPT 87 (121)
T ss_dssp --CCSEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHHHHTTCCSSSE
T ss_pred hcccceecCHHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC--CeEEEEEECCCCHHHHHhcCCCcCCE
Confidence 4556899999999998877889999999999999999999999999999976 699999999988 55 5899999999
Q ss_pred EEEEeCCCccCceEecCCCCHHHHHHHHHHHhc
Q 023747 224 LLFYPAGDKANPIKVSARSSSKNIAAFIKEQLK 256 (278)
Q Consensus 224 l~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~~ 256 (278)
+++|++|+.+. ++.|..+.+.|.+||++.++
T Consensus 88 ~~~~~~g~~~~--~~~G~~~~~~l~~~l~~~l~ 118 (121)
T 2i1u_A 88 LILFKDGQPVK--RIVGAKGKAALLRELSDVVP 118 (121)
T ss_dssp EEEEETTEEEE--EEESCCCHHHHHHHTCSCCC
T ss_pred EEEEECCEEEE--EecCCCCHHHHHHHHHHHHh
Confidence 99999887643 78999999999999987654
No 54
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.74 E-value=2.3e-17 Score=135.89 Aligned_cols=111 Identities=23% Similarity=0.520 Sum_probs=100.2
Q ss_pred CCCCeEEEcccchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcCCCe
Q 023747 146 TNANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPT 223 (278)
Q Consensus 146 ~~~~v~~l~~~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~~Pt 223 (278)
..+.+..++.++|++.+.+.+++++|.||++||++|+.+.|.+.+++..+.+ ++.|+.||++.+ ++ .+|+|.++||
T Consensus 10 ~~~~~~~lt~~~f~~~v~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~--~v~~~~vd~d~~~~l~~~~~v~~~Pt 87 (222)
T 3dxb_A 10 MSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQG--KLTVAKLNIDQNPGTAPKYGIRGIPT 87 (222)
T ss_dssp CSCCCEECCTTTHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCTTTGGGGTCCSBSE
T ss_pred CCCCceeCCHHHHHHHHHhcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcC--CcEEEEEECCCCHHHHHHcCCCcCCE
Confidence 5567899999999998778899999999999999999999999999999987 699999999998 66 5899999999
Q ss_pred EEEEeCCCccCceEecCCCCHHHHHHHHHHHhcccCC
Q 023747 224 LLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKEKDQ 260 (278)
Q Consensus 224 l~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~~~~~~ 260 (278)
+++|++|+.+. ++.|..+.+.|.+||.+.+.....
T Consensus 88 ~~~~~~G~~~~--~~~G~~~~~~l~~~l~~~l~~~~~ 122 (222)
T 3dxb_A 88 LLLFKNGEVAA--TKVGALSKGQLKEFLDANLAGSAM 122 (222)
T ss_dssp EEEEETTEEEE--EEESCCCHHHHHHHHHHHSCCSCC
T ss_pred EEEEECCeEEE--EeccccChHHHHHHHHhhcccccc
Confidence 99999887653 789999999999999999976543
No 55
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.74 E-value=4.3e-18 Score=125.82 Aligned_cols=103 Identities=18% Similarity=0.390 Sum_probs=89.3
Q ss_pred CCCeEEEcccchHHHhhc-CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcCCCe
Q 023747 147 NANVQIVVGKTFDDLVLN-SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPT 223 (278)
Q Consensus 147 ~~~v~~l~~~~~~~~i~~-~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~~Pt 223 (278)
.......+.++|++.+.. .+++++|.||++||++|+.+.|.++++++.+.+ +.|+.||++.+ ++ .+|+|.++|+
T Consensus 11 ~~~~~~~t~~~f~~~l~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~---v~~~~vd~d~~~~l~~~~~v~~~Pt 87 (116)
T 3qfa_C 11 GSVKQIESKTAFQEALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN---VIFLEVDVDDCQDVASECEVKSMPT 87 (116)
T ss_dssp -CCBCCCCHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT---SEEEEEETTTTHHHHHHTTCCSSSE
T ss_pred CcccCCCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC---CEEEEEECCCCHHHHHHcCCccccE
Confidence 334566788999998854 689999999999999999999999999999874 99999999988 66 5899999999
Q ss_pred EEEEeCCCccCceEecCCCCHHHHHHHHHHHh
Q 023747 224 LLFYPAGDKANPIKVSARSSSKNIAAFIKEQL 255 (278)
Q Consensus 224 l~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~ 255 (278)
+++|++|+.+. ++.|. +.+.|.+||++++
T Consensus 88 ~~~~~~G~~~~--~~~G~-~~~~l~~~l~~~l 116 (116)
T 3qfa_C 88 FQFFKKGQKVG--EFSGA-NKEKLEATINELV 116 (116)
T ss_dssp EEEESSSSEEE--EEESC-CHHHHHHHHHHHC
T ss_pred EEEEeCCeEEE--EEcCC-CHHHHHHHHHHhC
Confidence 99998887654 68888 9999999998764
No 56
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.74 E-value=9.6e-18 Score=121.25 Aligned_cols=101 Identities=18% Similarity=0.473 Sum_probs=88.9
Q ss_pred eEEEcccchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcCCCeEEEE
Q 023747 150 VQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTLLFY 227 (278)
Q Consensus 150 v~~l~~~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~~Ptl~~f 227 (278)
|..++.++|.+.+ ..+++++|+||++||++|+.+.|.++++++.+.+ ++.++.+|++.+ ++ .+|++.++|++++|
T Consensus 2 v~~l~~~~~~~~~-~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~--~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 78 (105)
T 1nsw_A 2 TMTLTDANFQQAI-QGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHAD--KVTVAKLNVDENPETTSQFGIMSIPTLILF 78 (105)
T ss_dssp CEEECTTTHHHHH-SSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT--TCEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred ceeccHHhHHHHH-hCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC--CcEEEEEECcCCHHHHHHcCCccccEEEEE
Confidence 6789999999654 6678999999999999999999999999999976 699999999988 55 58999999999999
Q ss_pred eCCCccCceEecCCCCHHHHHHHHHHHh
Q 023747 228 PAGDKANPIKVSARSSSKNIAAFIKEQL 255 (278)
Q Consensus 228 ~~g~~~~~~~~~g~~~~~~l~~~i~~~~ 255 (278)
++|+... ++.|..+.+.|.+||.+.+
T Consensus 79 ~~G~~~~--~~~G~~~~~~l~~~l~~~l 104 (105)
T 1nsw_A 79 KGGRPVK--QLIGYQPKEQLEAQLADVL 104 (105)
T ss_dssp ETTEEEE--EEESCCCHHHHHHHTTTTT
T ss_pred eCCeEEE--EEecCCCHHHHHHHHHHHh
Confidence 8887543 7889999999999997654
No 57
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.74 E-value=1.1e-17 Score=121.42 Aligned_cols=104 Identities=25% Similarity=0.554 Sum_probs=91.2
Q ss_pred CeEEEcccchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcCCCeEEE
Q 023747 149 NVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTLLF 226 (278)
Q Consensus 149 ~v~~l~~~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~~Ptl~~ 226 (278)
.|..++.++|++.+ ..+++++|+||++||++|+.+.|.+.+++..+.+ ++.++.+|++.+ ++ .+|++.++|++++
T Consensus 2 ~v~~l~~~~~~~~~-~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 78 (109)
T 2yzu_A 2 KPIEVTDQNFDETL-GQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEG--KLLVAKLDVDENPKTAMRYRVMSIPTVIL 78 (109)
T ss_dssp CCEECCTTTHHHHH-HHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBT--TBEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred cceEccHhHHHHHh-cCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhC--ceEEEEEECCCCHhHHHhCCCCcCCEEEE
Confidence 47889999999665 6688999999999999999999999999999986 699999999988 55 5899999999999
Q ss_pred EeCCCccCceEecCCCCHHHHHHHHHHHhcc
Q 023747 227 YPAGDKANPIKVSARSSSKNIAAFIKEQLKE 257 (278)
Q Consensus 227 f~~g~~~~~~~~~g~~~~~~l~~~i~~~~~~ 257 (278)
|++|+... ++.|..+.+.|.+||++.++.
T Consensus 79 ~~~g~~~~--~~~g~~~~~~l~~~l~~~l~~ 107 (109)
T 2yzu_A 79 FKDGQPVE--VLVGAQPKRNYQAKIEKHLPA 107 (109)
T ss_dssp EETTEEEE--EEESCCCHHHHHHHHHTTC--
T ss_pred EeCCcEee--eEeCCCCHHHHHHHHHHHhhh
Confidence 98887553 788999999999999988764
No 58
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.74 E-value=3.4e-18 Score=127.79 Aligned_cols=104 Identities=24% Similarity=0.561 Sum_probs=87.6
Q ss_pred CeEEEcccchHHHhhcCCCcEEEEEECCCCh--------------hHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC
Q 023747 149 NVQIVVGKTFDDLVLNSHKDVLLEVYTPWCV--------------TCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH 213 (278)
Q Consensus 149 ~v~~l~~~~~~~~i~~~~~~~~v~f~~~~c~--------------~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~ 213 (278)
.|..++.++|++.+.+.+++++|.||++||+ +|+.+.|.+++++..+.+ ++.++.+|++.+ ++
T Consensus 4 ~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~--~~~~~~vd~d~~~~l 81 (123)
T 1oaz_A 4 KIIHLTDDSFDTDVLKADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQG--KLTVAKLNIDQNPGT 81 (123)
T ss_dssp SCEECCSTTHHHHTTSCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC---------CEEEEEETTSCTTT
T ss_pred ccEecChhhHHHHHHhCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcC--CeEEEEEECCCCHHH
Confidence 5788999999988878899999999999999 999999999999999876 699999999988 56
Q ss_pred -CCCCCcCCCeEEEEeCCCccCceEecCCCCHHHHHHHHHHHhc
Q 023747 214 -PKLQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLK 256 (278)
Q Consensus 214 -~~~~i~~~Ptl~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~~ 256 (278)
.+|+|.++|++++|++|+.+. ++.|..+.++|.+||++.++
T Consensus 82 ~~~~~v~~~Pt~~~~~~G~~~~--~~~G~~~~~~l~~~l~~~l~ 123 (123)
T 1oaz_A 82 APKYGIRGIPTLLLFKNGEVAA--TKVGALSKGQLKEFLDANLA 123 (123)
T ss_dssp GGGGTCCBSSEEEEEESSSEEE--EEESCCCHHHHHHHHTTTCC
T ss_pred HHHcCCCccCEEEEEECCEEEE--EEeCCCCHHHHHHHHHHHhC
Confidence 589999999999998887654 78999999999999987653
No 59
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.73 E-value=2.5e-17 Score=119.68 Aligned_cols=101 Identities=13% Similarity=0.259 Sum_probs=86.3
Q ss_pred eEEE-cccchHHHhhc-CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcCCCeEE
Q 023747 150 VQIV-VGKTFDDLVLN-SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTLL 225 (278)
Q Consensus 150 v~~l-~~~~~~~~i~~-~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~~Ptl~ 225 (278)
+..+ +.++|++.+.+ .+++++|+||++||++|+.+.|.++++++.+. ++.|+.+|++.+ ++ .+|++.++||++
T Consensus 3 v~~i~~~~~~~~~~~~~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~---~~~~~~vd~~~~~~~~~~~~v~~~Pt~~ 79 (107)
T 1gh2_A 3 VKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYP---QAVFLEVDVHQCQGTAATNNISATPTFQ 79 (107)
T ss_dssp EEEECSGGGHHHHHHHTTTSCEEEEEECSSCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTSHHHHHHTTCCSSSEEE
T ss_pred eEEecCHHHHHHHHHhCCCCEEEEEEECCCChhhHHHHHHHHHHHHHCC---CcEEEEEECccCHHHHHhcCCCcccEEE
Confidence 5556 56899998864 68899999999999999999999999999994 699999999988 56 589999999999
Q ss_pred EEeCCCccCceEecCCCCHHHHHHHHHHHhc
Q 023747 226 FYPAGDKANPIKVSARSSSKNIAAFIKEQLK 256 (278)
Q Consensus 226 ~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~~ 256 (278)
+|++|+.+. ++.|. +.++|.+||++++|
T Consensus 80 ~~~~G~~~~--~~~G~-~~~~l~~~l~~~lg 107 (107)
T 1gh2_A 80 FFRNKVRID--QYQGA-DAVGLEEKIKQHLE 107 (107)
T ss_dssp EEETTEEEE--EEESS-CHHHHHHHHHHHHC
T ss_pred EEECCeEEE--EEeCC-CHHHHHHHHHHhcC
Confidence 999887654 67884 45669999998875
No 60
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.73 E-value=2.6e-17 Score=120.32 Aligned_cols=104 Identities=22% Similarity=0.377 Sum_probs=89.6
Q ss_pred CCCCeEEEcccchHHHhhc-CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCC-CC-CC-CCCCCcCC
Q 023747 146 TNANVQIVVGKTFDDLVLN-SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDAS-AN-EH-PKLQVEEY 221 (278)
Q Consensus 146 ~~~~v~~l~~~~~~~~i~~-~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~-~~-~~-~~~~i~~~ 221 (278)
..+.|..++.++|.+.+.. .+++++|+||++||++|+.+.|.+.+++..+. ++.|+.+|++ .+ ++ .+|++.++
T Consensus 3 ~~~~v~~l~~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~---~v~~~~vd~~~~~~~~~~~~~v~~~ 79 (111)
T 2pu9_C 3 IVGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYL---DVIFLKLDCNQENKTLAKELGIRVV 79 (111)
T ss_dssp CTTSEEEECTTTHHHHHTTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEECSSTTHHHHHHHCCSBS
T ss_pred CcCccEEechHHHHHHHHhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCC---CeEEEEEecCcchHHHHHHcCCCee
Confidence 3557999999999999865 58899999999999999999999999999987 4899999998 44 55 48999999
Q ss_pred CeEEEEeCCCccCceEecCCCCHHHHHHHHHHHh
Q 023747 222 PTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQL 255 (278)
Q Consensus 222 Ptl~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~ 255 (278)
||++++++|+... ++.|. +.+.|.++|++.+
T Consensus 80 Pt~~~~~~G~~~~--~~~G~-~~~~l~~~l~~~~ 110 (111)
T 2pu9_C 80 PTFKILKENSVVG--EVTGA-KYDKLLEAIQAAR 110 (111)
T ss_dssp SEEEEESSSSEEE--EEESS-CHHHHHHHHHHHH
T ss_pred eEEEEEeCCcEEE--EEcCC-CHHHHHHHHHHhh
Confidence 9999998887653 67776 4899999998765
No 61
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.73 E-value=7.4e-18 Score=122.14 Aligned_cols=96 Identities=18% Similarity=0.202 Sum_probs=77.5
Q ss_pred cccchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcCCCeEEEEeCCC
Q 023747 154 VGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTLLFYPAGD 231 (278)
Q Consensus 154 ~~~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~~Ptl~~f~~g~ 231 (278)
+.++|++.+ ..+++++|.||++||++|+.+.|.+.+++..+. ++.|+.+|++.+ ++ .+|+|.++||+++|++|+
T Consensus 7 ~~~~~~~~~-~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~---~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~ 82 (105)
T 4euy_A 7 TIEELATYI-EEQQLVLLFIKTENCGVCDVMLRKVNYVLENYN---YVEKIEILLQDMQEIAGRYAVFTGPTVLLFYNGK 82 (105)
T ss_dssp ---CCSSST-TCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT---TEEEEEEEECCC---------CCCCEEEEEETTE
T ss_pred CHHHHHHHH-hcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC---CceEEEEECCCCHHHHHhcCCCCCCEEEEEeCCe
Confidence 457777766 668999999999999999999999999999984 699999999988 66 589999999999999887
Q ss_pred ccCceEecCCCCHHHHHHHHHHHh
Q 023747 232 KANPIKVSARSSSKNIAAFIKEQL 255 (278)
Q Consensus 232 ~~~~~~~~g~~~~~~l~~~i~~~~ 255 (278)
.+. ++.|..+.+.|.++|++++
T Consensus 83 ~~~--~~~g~~~~~~l~~~l~~~~ 104 (105)
T 4euy_A 83 EIL--RESRFISLENLERTIQLFE 104 (105)
T ss_dssp EEE--EEESSCCHHHHHHHHHTTC
T ss_pred EEE--EEeCCcCHHHHHHHHHHhh
Confidence 654 7889999999999998765
No 62
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.73 E-value=2.2e-17 Score=118.71 Aligned_cols=101 Identities=24% Similarity=0.508 Sum_probs=90.1
Q ss_pred eEEEcccchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcCCCeEEEE
Q 023747 150 VQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTLLFY 227 (278)
Q Consensus 150 v~~l~~~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~~Ptl~~f 227 (278)
|..++.++|++.+ ..+++++|+||++||++|+.+.+.+.++++.+.+ +.++.+|++.+ ++ .+|++.++|++++|
T Consensus 1 V~~l~~~~~~~~~-~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 76 (104)
T 2e0q_A 1 VIHLDSKNFDSFL-ASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ---VGFGKLNSDENPDIAARYGVMSLPTVIFF 76 (104)
T ss_dssp CEECCTTTHHHHH-HHSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT---SEEEEEETTTCHHHHHHTTCCSSCEEEEE
T ss_pred CeecCHHHHHHHH-hcCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC---ceEEEEECCCCHHHHHhCCccccCEEEEE
Confidence 4578899999988 5678999999999999999999999999999875 99999999988 55 58999999999999
Q ss_pred eCCCccCceEecCCCCHHHHHHHHHHHhc
Q 023747 228 PAGDKANPIKVSARSSSKNIAAFIKEQLK 256 (278)
Q Consensus 228 ~~g~~~~~~~~~g~~~~~~l~~~i~~~~~ 256 (278)
++|+... ++.|..+.+.+.+||++.++
T Consensus 77 ~~g~~~~--~~~g~~~~~~l~~~l~~~l~ 103 (104)
T 2e0q_A 77 KDGEPVD--EIIGAVPREEIEIRIKNLLG 103 (104)
T ss_dssp ETTEEEE--EEESCCCHHHHHHHHHHHHT
T ss_pred ECCeEhh--hccCCCCHHHHHHHHHHHhc
Confidence 8887653 78899999999999998875
No 63
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.73 E-value=1.5e-17 Score=143.01 Aligned_cols=113 Identities=23% Similarity=0.447 Sum_probs=98.5
Q ss_pred CCCCeEEEcccchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCC--C-CC-CCCCCcCC
Q 023747 146 TNANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA--N-EH-PKLQVEEY 221 (278)
Q Consensus 146 ~~~~v~~l~~~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~--~-~~-~~~~i~~~ 221 (278)
....|..++.++|++.+.+.+++++|.|||+||++|+.+.|.|.+++..+.+ .+.++.+||+. + ++ .+|+|.++
T Consensus 15 ~~~~vv~lt~~~f~~~i~~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~--~~~~~~v~~d~~~~~~l~~~~~I~~~ 92 (298)
T 3ed3_A 15 SDPHISELTPKSFDKAIHNTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDG--VVQVAAVNCDLNKNKALCAKYDVNGF 92 (298)
T ss_dssp SCTTCEECCHHHHHHHHTSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TSEEEEEETTSTTTHHHHHHTTCCBS
T ss_pred CCCCeEEeCHHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHccC--CcEEEEEEccCccCHHHHHhCCCCcc
Confidence 4567999999999999977788999999999999999999999999999987 68999999984 3 44 48999999
Q ss_pred CeEEEEeCCCc---------------cCceEecCCCCHHHHHHHHHHHhcccCC
Q 023747 222 PTLLFYPAGDK---------------ANPIKVSARSSSKNIAAFIKEQLKEKDQ 260 (278)
Q Consensus 222 Ptl~~f~~g~~---------------~~~~~~~g~~~~~~l~~~i~~~~~~~~~ 260 (278)
||+++|++|+. .....|.|.++.+.|.+|+.+++++...
T Consensus 93 Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~~~~v~ 146 (298)
T 3ed3_A 93 PTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRIRSYVK 146 (298)
T ss_dssp SEEEEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHTTCCCCEE
T ss_pred ceEEEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHHhcccccE
Confidence 99999998862 1145899999999999999999976544
No 64
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.72 E-value=3.1e-17 Score=122.80 Aligned_cols=106 Identities=22% Similarity=0.495 Sum_probs=91.7
Q ss_pred CCCCeEEEcccchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcCCCe
Q 023747 146 TNANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPT 223 (278)
Q Consensus 146 ~~~~v~~l~~~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~~Pt 223 (278)
..+.|..++.++|++.+. +.++|+||++||++|+.+.|.+.++++.+.+. ++.|+.+|++.+ ++ .+|+|.++|+
T Consensus 5 ~~~~v~~l~~~~f~~~~~---~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~-~v~~~~vd~~~~~~~~~~~~v~~~Pt 80 (126)
T 1x5e_A 5 SSGNVRVITDENWRELLE---GDWMIEFYAPWCPACQNLQPEWESFAEWGEDL-EVNIAKVDVTEQPGLSGRFIINALPT 80 (126)
T ss_dssp CCCSEEECCTTTHHHHTS---SEEEEEEECSSCHHHHHHHHHHHHHHHHHGGG-TCEEEEEETTTCHHHHHHTTCCSSSE
T ss_pred CCCccEEecHHHHHHHhC---CCEEEEEECCCCHHHHHHhHHHHHHHHHhccC-CeEEEEEECcCCHHHHHHcCCcccCE
Confidence 345789999999998763 23999999999999999999999999998742 599999999988 55 5899999999
Q ss_pred EEEEeCCCccCceEecCCCCHHHHHHHHHHHhccc
Q 023747 224 LLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKEK 258 (278)
Q Consensus 224 l~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~~~~ 258 (278)
+++|++|+ + .++.|..+.+.|.+||.++++..
T Consensus 81 ~~~~~~G~-~--~~~~G~~~~~~l~~~l~~~~~~~ 112 (126)
T 1x5e_A 81 IYHCKDGE-F--RRYQGPRTKKDFINFISDKEWKS 112 (126)
T ss_dssp EEEEETTE-E--EECCSCCCHHHHHHHHHTCGGGG
T ss_pred EEEEeCCe-E--EEeecCCCHHHHHHHHHHHhhcc
Confidence 99998876 3 37999999999999999988654
No 65
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.72 E-value=4.3e-17 Score=117.82 Aligned_cols=101 Identities=25% Similarity=0.504 Sum_probs=87.8
Q ss_pred eEEEcc-cchHHHhhc-CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcCCCeEE
Q 023747 150 VQIVVG-KTFDDLVLN-SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTLL 225 (278)
Q Consensus 150 v~~l~~-~~~~~~i~~-~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~~Ptl~ 225 (278)
|..+++ ++|.+.+.+ .+++++|.||++||++|+.+.|.+++++..+.. ++.++.+|++.+ ++ .+|++.++|+++
T Consensus 2 v~~l~~~~~~~~~l~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~ 79 (106)
T 1xwb_A 2 VYQVKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFAD--NVVVLKVDVDECEDIAMEYNISSMPTFV 79 (106)
T ss_dssp EEECCSHHHHHHHHHHHTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TEEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred ceecCCHHHHHHHHHhcCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCC--CeEEEEEeccchHHHHHHcCCCcccEEE
Confidence 456777 899998865 688999999999999999999999999999975 799999999988 55 589999999999
Q ss_pred EEeCCCccCceEecCCCCHHHHHHHHHHHh
Q 023747 226 FYPAGDKANPIKVSARSSSKNIAAFIKEQL 255 (278)
Q Consensus 226 ~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~ 255 (278)
+|++|+... ++.| .+.+.|.+||++.+
T Consensus 80 ~~~~G~~~~--~~~g-~~~~~l~~~i~~~l 106 (106)
T 1xwb_A 80 FLKNGVKVE--EFAG-ANAKRLEDVIKANI 106 (106)
T ss_dssp EEETTEEEE--EEES-CCHHHHHHHHHHTC
T ss_pred EEcCCcEEE--EEcC-CCHHHHHHHHHHhC
Confidence 999887653 6788 78899999998753
No 66
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.71 E-value=3.3e-17 Score=125.03 Aligned_cols=105 Identities=22% Similarity=0.412 Sum_probs=79.9
Q ss_pred CCeEEEcccchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcCCCeEE
Q 023747 148 ANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTLL 225 (278)
Q Consensus 148 ~~v~~l~~~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~~Ptl~ 225 (278)
+.+..++.++|.+.+...++ ++|+||++||++|+.+.|.+++++..+.+ ++.|+.+|++.+ ++ .+|++.++|+++
T Consensus 33 ~~v~~l~~~~~~~~~~~~~~-vvv~f~~~~C~~C~~~~~~l~~l~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 109 (140)
T 1v98_A 33 PWVVEADEKGFAQEVAGAPL-TLVDFFAPWCGPCRLVSPILEELARDHAG--RLKVVKVNVDEHPGLAARYGVRSVPTLV 109 (140)
T ss_dssp ----------------CCCE-EEEEEECTTCHHHHHHHHHHHHHHHHTTT--TEEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred CccccCCHHHHHHHHHcCCC-EEEEEECCCCHHHHHHHHHHHHHHHHccC--ceEEEEEECCCCHHHHHHCCCCccCEEE
Confidence 45788999999998877666 99999999999999999999999999986 699999999988 56 589999999999
Q ss_pred EEeCCCccCceEecCCCCHHHHHHHHHHHhcc
Q 023747 226 FYPAGDKANPIKVSARSSSKNIAAFIKEQLKE 257 (278)
Q Consensus 226 ~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~~~ 257 (278)
+|++|+.+. .+.|..+.+.|.+||.+.++.
T Consensus 110 ~~~~G~~~~--~~~G~~~~~~l~~~i~~~l~~ 139 (140)
T 1v98_A 110 LFRRGAPVA--TWVGASPRRVLEERLRPYLEG 139 (140)
T ss_dssp EEETTEEEE--EEESCCCHHHHHHHHHHHHTC
T ss_pred EEeCCcEEE--EEeCCCCHHHHHHHHHHHHcc
Confidence 999887653 789999999999999998763
No 67
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.71 E-value=4.1e-17 Score=122.24 Aligned_cols=100 Identities=24% Similarity=0.412 Sum_probs=89.4
Q ss_pred eEEEcc-cchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcCCCeEEE
Q 023747 150 VQIVVG-KTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTLLF 226 (278)
Q Consensus 150 v~~l~~-~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~~Ptl~~ 226 (278)
+..+++ ++|++.+ ..+++++|.||++||++|+.+.|.+.+++..+. ++.|+.+|++.+ ++ .+|++.++|++++
T Consensus 21 v~~l~~~~~f~~~~-~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~---~v~~~~vd~d~~~~l~~~~~v~~~Pt~~i 96 (125)
T 1r26_A 21 VVDVYSVEQFRNIM-SEDILTVAWFTAVWCGPCKTIERPMEKIAYEFP---TVKFAKVDADNNSEIVSKCRVLQLPTFII 96 (125)
T ss_dssp CEEECCHHHHHHHH-HSSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT---TSEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred eEECCCHHHHHHHH-ccCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC---CCEEEEEECCCCHHHHHHcCCCcccEEEE
Confidence 789999 9999988 778999999999999999999999999999984 599999999988 56 5899999999999
Q ss_pred EeCCCccCceEecCCCCHHHHHHHHHHHhc
Q 023747 227 YPAGDKANPIKVSARSSSKNIAAFIKEQLK 256 (278)
Q Consensus 227 f~~g~~~~~~~~~g~~~~~~l~~~i~~~~~ 256 (278)
|++|+.+. .+.| .+.+.|.+||.+.+.
T Consensus 97 ~~~G~~~~--~~~G-~~~~~l~~~l~~~l~ 123 (125)
T 1r26_A 97 ARSGKMLG--HVIG-ANPGMLRQKLRDIIK 123 (125)
T ss_dssp EETTEEEE--EEES-SCHHHHHHHHHHHHH
T ss_pred EeCCeEEE--EEeC-CCHHHHHHHHHHHhc
Confidence 99887653 6788 688999999998764
No 68
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.71 E-value=4.4e-17 Score=119.16 Aligned_cols=103 Identities=20% Similarity=0.472 Sum_probs=89.6
Q ss_pred CeEEE-cccchHHHhhc-C--CCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcCCC
Q 023747 149 NVQIV-VGKTFDDLVLN-S--HKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYP 222 (278)
Q Consensus 149 ~v~~l-~~~~~~~~i~~-~--~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~~P 222 (278)
.+..+ +.++|++.+.. . +++++|.||++||++|+.+.|.+.+++..+.+ ++.|+.+|++.+ ++ .+|++.++|
T Consensus 3 ~v~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~P 80 (112)
T 1ep7_A 3 SVIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAG--KVIFLKVDVDAVAAVAEAAGITAMP 80 (112)
T ss_dssp SEEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TSEEEEEETTTTHHHHHHHTCCBSS
T ss_pred cEEEecCHHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC--CeEEEEEECCchHHHHHHcCCCccc
Confidence 46777 56899998864 3 78999999999999999999999999999986 699999999988 55 589999999
Q ss_pred eEEEEeCCCccCceEecCCCCHHHHHHHHHHHhc
Q 023747 223 TLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLK 256 (278)
Q Consensus 223 tl~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~~ 256 (278)
++++|++|+... ++.|. +.+.|.+||++++.
T Consensus 81 t~~~~~~G~~~~--~~~G~-~~~~l~~~l~~~l~ 111 (112)
T 1ep7_A 81 TFHVYKDGVKAD--DLVGA-SQDKLKALVAKHAA 111 (112)
T ss_dssp EEEEEETTEEEE--EEESC-CHHHHHHHHHHHHC
T ss_pred EEEEEECCeEEE--EEcCC-CHHHHHHHHHHHhc
Confidence 999999887653 68888 99999999998764
No 69
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.71 E-value=1.2e-16 Score=121.24 Aligned_cols=106 Identities=15% Similarity=0.204 Sum_probs=90.1
Q ss_pred CCCeEEEcccchHHHhhcC--CCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCCCCCCCcCCCeE
Q 023747 147 NANVQIVVGKTFDDLVLNS--HKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASANEHPKLQVEEYPTL 224 (278)
Q Consensus 147 ~~~v~~l~~~~~~~~i~~~--~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~~~~~~~i~~~Ptl 224 (278)
.+.+..++.++|.+.+... +++++|+||++||++|+.+.|.+.+++..+. ++.|+.||++... .+|+|..+||+
T Consensus 9 ~g~v~~i~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~---~v~~~~vd~~~~~-~~~~i~~~Pt~ 84 (135)
T 2dbc_A 9 FGELREISGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP---ETKFVKAIVNSCI-EHYHDNCLPTI 84 (135)
T ss_dssp CCSCEECCHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS---SEEEEEECCSSSC-SSCCSSCCSEE
T ss_pred CCceEEcCHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC---CcEEEEEEhhcCc-ccCCCCCCCEE
Confidence 4568889999999988654 3689999999999999999999999999985 5999999998754 68999999999
Q ss_pred EEEeCCCccCceEecCCC-------CHHHHHHHHHHHhccc
Q 023747 225 LFYPAGDKANPIKVSARS-------SSKNIAAFIKEQLKEK 258 (278)
Q Consensus 225 ~~f~~g~~~~~~~~~g~~-------~~~~l~~~i~~~~~~~ 258 (278)
++|++|+.+. ++.|.. +.+.|.++|.++-...
T Consensus 85 ~~~~~G~~v~--~~~G~~~~~~~~~~~~~l~~~l~~~~~i~ 123 (135)
T 2dbc_A 85 FVYKNGQIEG--KFIGIIECGGINLKLEELEWKLSEVGAIQ 123 (135)
T ss_dssp EEESSSSCSE--EEESTTTTTCTTCCHHHHHHHHHHHTSSC
T ss_pred EEEECCEEEE--EEEeEEeeCCCcCCHHHHHHHHHHcCCcc
Confidence 9999888765 566653 7899999999875443
No 70
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.71 E-value=6.7e-17 Score=120.14 Aligned_cols=105 Identities=21% Similarity=0.375 Sum_probs=91.9
Q ss_pred CCCeEEEcccchHHHhhc---CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcCC
Q 023747 147 NANVQIVVGKTFDDLVLN---SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEY 221 (278)
Q Consensus 147 ~~~v~~l~~~~~~~~i~~---~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~~ 221 (278)
...+..++.++|.+.+.. .+++++|+||++||++|+.+.|.+++++..+.+ +.|+.+|++.+ ++ .+|++.++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~vd~~~~~~~~~~~~v~~~ 88 (122)
T 2vlu_A 12 AEVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN---AVFLKVDVDELKPIAEQFSVEAM 88 (122)
T ss_dssp CCCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT---SEEEEEETTTCHHHHHHTTCCSS
T ss_pred CcceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC---cEEEEEECCCCHHHHHHcCCCcc
Confidence 335677788999998876 689999999999999999999999999999874 99999999988 56 58999999
Q ss_pred CeEEEEeCCCccCceEecCCCCHHHHHHHHHHHhcc
Q 023747 222 PTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKE 257 (278)
Q Consensus 222 Ptl~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~~~ 257 (278)
|++++|++|+.+. ++.|.. .+.|.+||+++++.
T Consensus 89 Pt~~~~~~G~~~~--~~~G~~-~~~l~~~l~~~l~~ 121 (122)
T 2vlu_A 89 PTFLFMKEGDVKD--RVVGAI-KEELTAKVGLHAAA 121 (122)
T ss_dssp SEEEEEETTEEEE--EEESSC-HHHHHHHHHHHHSC
T ss_pred cEEEEEeCCEEEE--EEeCcC-HHHHHHHHHHHhcc
Confidence 9999999887653 788888 99999999998763
No 71
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.71 E-value=5.6e-17 Score=132.43 Aligned_cols=109 Identities=22% Similarity=0.410 Sum_probs=97.3
Q ss_pred CCCCeEEEcccchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcCCCe
Q 023747 146 TNANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPT 223 (278)
Q Consensus 146 ~~~~v~~l~~~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~~Pt 223 (278)
....+..++..+|...+ ..+++++|.||++||++|+.+.|.|.+++..+.+ ++.|+.||++.+ ++ .+++|.++||
T Consensus 95 ~~~~v~~l~~~~f~~~~-~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt 171 (210)
T 3apq_A 95 DDPEIITLERREFDAAV-NSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDG--LLRIGAVNCGDDRMLCRMKGVNSYPS 171 (210)
T ss_dssp TCTTSEECCHHHHHHHH-HHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBT--TBEEEEEETTTCHHHHHHTTCCSSSE
T ss_pred CCCceEEecHHHHHHHH-ccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcC--ceEEEEEECCccHHHHHHcCCCcCCe
Confidence 34568899999999988 6688999999999999999999999999999987 699999999988 56 5899999999
Q ss_pred EEEEeCCCccCceEecCCCCHHHHHHHHHHHhcccC
Q 023747 224 LLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKEKD 259 (278)
Q Consensus 224 l~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~~~~~ 259 (278)
+++|++|+.+. ++.|..+.+.|.+||.++++...
T Consensus 172 ~~~~~~G~~~~--~~~G~~~~~~l~~~i~~~l~~~~ 205 (210)
T 3apq_A 172 LFIFRSGMAAV--KYNGDRSKESLVAFAMQHVRSTV 205 (210)
T ss_dssp EEEECTTSCCE--ECCSCCCHHHHHHHHHHHHHCCS
T ss_pred EEEEECCCcee--EecCCCCHHHHHHHHHHhCcccc
Confidence 99998887653 78999999999999999997654
No 72
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.71 E-value=4.1e-17 Score=139.35 Aligned_cols=106 Identities=18% Similarity=0.368 Sum_probs=95.1
Q ss_pred CCCeEEEcccchHHHhhcC-CCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcCCCe
Q 023747 147 NANVQIVVGKTFDDLVLNS-HKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPT 223 (278)
Q Consensus 147 ~~~v~~l~~~~~~~~i~~~-~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~~Pt 223 (278)
.+.|..++.++|++.+..+ +++++|.||++||++|+.+.|.+.++++.+.+ ++.|+.||++.+ ++ .+|+|.++||
T Consensus 6 ~~~v~~~~~~~f~~~~~~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~Pt 83 (287)
T 3qou_A 6 VENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNG--QFILAKLDCDAEQMIAAQFGLRAIPT 83 (287)
T ss_dssp CTTEEECCTTTHHHHHTTTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTS--SSEEEEEETTTCHHHHHTTTCCSSSE
T ss_pred CCccEECCHHHHHHHHHhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCC--CeEEEEEeCccCHHHHHHcCCCCCCe
Confidence 4468999999999987543 88999999999999999999999999999987 699999999998 66 5999999999
Q ss_pred EEEEeCCCccCceEecCCCCHHHHHHHHHHHhc
Q 023747 224 LLFYPAGDKANPIKVSARSSSKNIAAFIKEQLK 256 (278)
Q Consensus 224 l~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~~ 256 (278)
+++|++|+.+. ++.|..+.+.+..|+.+.++
T Consensus 84 ~~~~~~G~~~~--~~~g~~~~~~l~~~l~~~lp 114 (287)
T 3qou_A 84 VYLFQNGQPVD--GFQGPQPEEAIRALLDXVLP 114 (287)
T ss_dssp EEEEETTEEEE--EEESCCCHHHHHHHHHHHSC
T ss_pred EEEEECCEEEE--EeeCCCCHHHHHHHHHHHcC
Confidence 99999887654 78999999999999999874
No 73
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.71 E-value=5.3e-17 Score=118.82 Aligned_cols=103 Identities=18% Similarity=0.318 Sum_probs=85.2
Q ss_pred eEEEcc-cchHHHhhc--CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcCCCeE
Q 023747 150 VQIVVG-KTFDDLVLN--SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTL 224 (278)
Q Consensus 150 v~~l~~-~~~~~~i~~--~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~~Ptl 224 (278)
|..+++ ++|++.+.. .+++++|.||++||++|+.+.|.+.+++..++.. ++.|+.+|++.+ ++ .+|++.++|++
T Consensus 2 v~~i~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 80 (112)
T 3d6i_A 2 VIEINDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNS-NVSFLSIDADENSEISELFEISAVPYF 80 (112)
T ss_dssp EEEECCHHHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGT-TSEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred ccccCCHHHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCC-CEEEEEEecccCHHHHHHcCCCcccEE
Confidence 677887 999998853 4789999999999999999999999999996432 599999999988 56 58999999999
Q ss_pred EEEeCCCccCceEecCCCCHHHHHHHHHHHhc
Q 023747 225 LFYPAGDKANPIKVSARSSSKNIAAFIKEQLK 256 (278)
Q Consensus 225 ~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~~ 256 (278)
++|++|+.+. ++.|. +.++|.++|.+.++
T Consensus 81 ~~~~~G~~~~--~~~G~-~~~~l~~~l~~~~~ 109 (112)
T 3d6i_A 81 IIIHKGTILK--ELSGA-DPKEYVSLLEDCKN 109 (112)
T ss_dssp EEEETTEEEE--EECSC-CHHHHHHHHHHHHH
T ss_pred EEEECCEEEE--EecCC-CHHHHHHHHHHHHh
Confidence 9999887653 67776 45679999998775
No 74
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.70 E-value=6.3e-17 Score=118.12 Aligned_cols=100 Identities=25% Similarity=0.463 Sum_probs=86.3
Q ss_pred CeEEEcccchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcCCCeEEE
Q 023747 149 NVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTLLF 226 (278)
Q Consensus 149 ~v~~l~~~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~~Ptl~~ 226 (278)
.....+.++|++.+ ..+++++|.||++||++|+.+.|.+++++..+. ++.|+.+|++.+ ++ .+|+|.++|++++
T Consensus 8 ~~~~~~~~~f~~~~-~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~---~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~ 83 (109)
T 3f3q_A 8 VTQFKTASEFDSAI-AQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYP---QADFYKLDVDELGDVAQKNEVSAMPTLLL 83 (109)
T ss_dssp CEECCSHHHHHHHT-TSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred ccCCCCHHHHHHHH-hcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC---CCEEEEEECCCCHHHHHHcCCCccCEEEE
Confidence 44566778999877 558999999999999999999999999999996 489999999988 66 5899999999999
Q ss_pred EeCCCccCceEecCCCCHHHHHHHHHHHh
Q 023747 227 YPAGDKANPIKVSARSSSKNIAAFIKEQL 255 (278)
Q Consensus 227 f~~g~~~~~~~~~g~~~~~~l~~~i~~~~ 255 (278)
|++|+.+. ++.|. +.+.|.++|++++
T Consensus 84 ~~~G~~~~--~~~G~-~~~~l~~~i~~~l 109 (109)
T 3f3q_A 84 FKNGKEVA--KVVGA-NPAAIKQAIAANA 109 (109)
T ss_dssp EETTEEEE--EEESS-CHHHHHHHHHHHC
T ss_pred EECCEEEE--EEeCC-CHHHHHHHHHhhC
Confidence 99887654 67787 7799999998764
No 75
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.70 E-value=3.7e-17 Score=145.39 Aligned_cols=110 Identities=19% Similarity=0.413 Sum_probs=94.0
Q ss_pred CCeEEEcccchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcC----CCceEEEEEeCCCC-CC-CCCCCcCC
Q 023747 148 ANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKG----LDNLVIAKIDASAN-EH-PKLQVEEY 221 (278)
Q Consensus 148 ~~v~~l~~~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~----~~~~~~~~vd~~~~-~~-~~~~i~~~ 221 (278)
+.|..++.++|++.+ ..+++++|.|||+||++|+.+.|.|++++..++. .+++.++.|||+.+ ++ .+|+|.++
T Consensus 5 ~~v~~l~~~~f~~~~-~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~~l~~~~~v~~~ 83 (382)
T 2r2j_A 5 SEITSLDTENIDEIL-NNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSDIAQRYRISKY 83 (382)
T ss_dssp ---CBCCTTTHHHHH-HHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCHHHHHHTTCCEE
T ss_pred CceEECCHHHHHHHH-hcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccHHHHHhcCCCcC
Confidence 358889999999976 5578999999999999999999999999999953 12599999999998 66 48999999
Q ss_pred CeEEEEeCCCccCceEecCCCCHHHHHHHHHHHhcccC
Q 023747 222 PTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKEKD 259 (278)
Q Consensus 222 Ptl~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~~~~~ 259 (278)
||+++|++|+.+ ...|.|.++.+.|.+||.+++++..
T Consensus 84 Pt~~~f~~G~~~-~~~~~G~~~~~~l~~~i~~~~~~~v 120 (382)
T 2r2j_A 84 PTLKLFRNGMMM-KREYRGQRSVKALADYIRQQKSDPI 120 (382)
T ss_dssp SEEEEEETTEEE-EEECCSCCSHHHHHHHHHHHHSCCC
T ss_pred CEEEEEeCCcEe-eeeecCcchHHHHHHHHHHhccCCc
Confidence 999999988754 2259999999999999999998754
No 76
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.69 E-value=1.4e-16 Score=114.62 Aligned_cols=99 Identities=21% Similarity=0.512 Sum_probs=85.4
Q ss_pred EEEcc-cchHHHhhc-CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcCCCeEEE
Q 023747 151 QIVVG-KTFDDLVLN-SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTLLF 226 (278)
Q Consensus 151 ~~l~~-~~~~~~i~~-~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~~Ptl~~ 226 (278)
+.+++ ++|++.+.+ .+++++|.||++||++|+.+.|.+.+++..+. ++.|+.+|++.+ ++ .+|++.++|++++
T Consensus 2 ~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~---~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 78 (104)
T 2vim_A 2 RVLATAADLEKLINENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP---EVEFAKVDVDQNEEAAAKYSVTAMPTFVF 78 (104)
T ss_dssp EECCSHHHHHHHHHTTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred eecCCHHHHHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC---CCEEEEEeccCCHHHHHHcCCccccEEEE
Confidence 45666 889988865 68899999999999999999999999999986 599999999988 55 5899999999999
Q ss_pred EeCCCccCceEecCCCCHHHHHHHHHHHh
Q 023747 227 YPAGDKANPIKVSARSSSKNIAAFIKEQL 255 (278)
Q Consensus 227 f~~g~~~~~~~~~g~~~~~~l~~~i~~~~ 255 (278)
|++|+... ++.| .+.+.|.+||++++
T Consensus 79 ~~~g~~~~--~~~G-~~~~~l~~~l~~~l 104 (104)
T 2vim_A 79 IKDGKEVD--RFSG-ANETKLRETITRHK 104 (104)
T ss_dssp EETTEEEE--EEES-SCHHHHHHHHHHHC
T ss_pred EeCCcEEE--EEeC-CCHHHHHHHHHhhC
Confidence 99887653 6788 68999999998763
No 77
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.69 E-value=1.8e-16 Score=118.16 Aligned_cols=103 Identities=23% Similarity=0.419 Sum_probs=88.7
Q ss_pred CCCeEEEcccchHHHhhc-CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCC-CC-CC-CCCCCcCCC
Q 023747 147 NANVQIVVGKTFDDLVLN-SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDAS-AN-EH-PKLQVEEYP 222 (278)
Q Consensus 147 ~~~v~~l~~~~~~~~i~~-~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~-~~-~~-~~~~i~~~P 222 (278)
.+.+..++.++|.+.+.. .+++++|.||++||++|+.+.|.++++++.+. ++.++.+|++ .+ ++ .+|++.++|
T Consensus 17 ~~~v~~l~~~~~~~~~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~---~~~~~~vd~~~~~~~~~~~~~v~~~P 93 (124)
T 1faa_A 17 VGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYL---DVIFLKLDCNQENKTLAKELGIRVVP 93 (124)
T ss_dssp TTSEEEECTTTHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEECSSTTHHHHHHHCCSSSS
T ss_pred CCceEEecchhHHHHHHhcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCC---CCEEEEEecCcchHHHHHHcCCCeee
Confidence 456899999999998865 58899999999999999999999999999987 4899999998 44 55 489999999
Q ss_pred eEEEEeCCCccCceEecCCCCHHHHHHHHHHHh
Q 023747 223 TLLFYPAGDKANPIKVSARSSSKNIAAFIKEQL 255 (278)
Q Consensus 223 tl~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~ 255 (278)
|++++++|+.+. ++.|.. .+.+.++|++..
T Consensus 94 t~~~~~~G~~~~--~~~G~~-~~~l~~~i~~~~ 123 (124)
T 1faa_A 94 TFKILKENSVVG--EVTGAK-YDKLLEAIQAAR 123 (124)
T ss_dssp EEEEEETTEEEE--EEESSC-HHHHHHHHHHHT
T ss_pred EEEEEeCCcEEE--EEcCCC-HHHHHHHHHHhh
Confidence 999999887653 677765 899999998764
No 78
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.69 E-value=1e-16 Score=118.36 Aligned_cols=100 Identities=20% Similarity=0.460 Sum_probs=87.3
Q ss_pred CeEEEcc-cchHHHhhc-CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcCCCeE
Q 023747 149 NVQIVVG-KTFDDLVLN-SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTL 224 (278)
Q Consensus 149 ~v~~l~~-~~~~~~i~~-~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~~Ptl 224 (278)
.+..+++ ++|.+.+.+ .+++++|.||++||++|+.+.|.+++++..+ ++.++.+|++.+ ++ .+|++.++|++
T Consensus 14 ~v~~l~~~~~~~~~l~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~----~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 89 (117)
T 2xc2_A 14 ELIELKQDGDLESLLEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY----DAIFVKVDVDKLEETARKYNISAMPTF 89 (117)
T ss_dssp EEEECCSTTHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS----SSEEEEEETTTSHHHHHHTTCCSSSEE
T ss_pred eeEEeCCHHHHHHHHHhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc----CcEEEEEECCccHHHHHHcCCCccceE
Confidence 3788888 999998865 6889999999999999999999999999887 489999999988 56 58999999999
Q ss_pred EEEeCCCccCceEecCCCCHHHHHHHHHHHh
Q 023747 225 LFYPAGDKANPIKVSARSSSKNIAAFIKEQL 255 (278)
Q Consensus 225 ~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~ 255 (278)
++|++|+.+. ++.| .+.+.|.++|++++
T Consensus 90 ~~~~~G~~~~--~~~G-~~~~~l~~~l~~~l 117 (117)
T 2xc2_A 90 IAIKNGEKVG--DVVG-ASIAKVEDMIKKFI 117 (117)
T ss_dssp EEEETTEEEE--EEES-SCHHHHHHHHHHHC
T ss_pred EEEeCCcEEE--EEeC-CCHHHHHHHHHHhC
Confidence 9999887653 6788 68899999998764
No 79
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.69 E-value=9.7e-17 Score=123.95 Aligned_cols=100 Identities=13% Similarity=0.184 Sum_probs=88.3
Q ss_pred EcccchHHHhh-cCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcCCCeEEEEeC
Q 023747 153 VVGKTFDDLVL-NSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTLLFYPA 229 (278)
Q Consensus 153 l~~~~~~~~i~-~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~~Ptl~~f~~ 229 (278)
.+.++|++.+. ..+++++|.|||+||++|+.+.|.+++++..+.+ ++.|+.||++++ ++ .+|+|.++||+++|++
T Consensus 9 ~~~~~~~~~i~~~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~--~~~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~ 86 (149)
T 3gix_A 9 TSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSK--MAAIYLVDVDQTAVYTQYFDISYIPSTVFFFN 86 (149)
T ss_dssp CSHHHHHHHHHHCCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTT--TEEEEEEETTTCCHHHHHTTCCSSSEEEEEET
T ss_pred CCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccC--ceEEEEEECCcCHHHHHHcCCCccCeEEEEEC
Confidence 35688999887 5689999999999999999999999999999976 699999999988 55 5899999999999999
Q ss_pred CCcc---------CceEecC-CCCHHHHHHHHHHHhc
Q 023747 230 GDKA---------NPIKVSA-RSSSKNIAAFIKEQLK 256 (278)
Q Consensus 230 g~~~---------~~~~~~g-~~~~~~l~~~i~~~~~ 256 (278)
|+.+ . ++.| ..+.+.|.++|++.+.
T Consensus 87 G~~v~~~~g~~~~~--~~~G~~~~~~~l~~~l~~~~~ 121 (149)
T 3gix_A 87 GQHMKVDYGSPDHT--KFVGSFKTKQDFIDLIEVIYR 121 (149)
T ss_dssp TEEEEEECSSSCCS--CEESCCSSHHHHHHHHHHHHH
T ss_pred CeEEEeecCCCCCC--eEeeecCCHHHHHHHHHHHHH
Confidence 9876 4 6788 8899999999998763
No 80
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.68 E-value=1.1e-16 Score=117.27 Aligned_cols=102 Identities=18% Similarity=0.426 Sum_probs=89.0
Q ss_pred CCCeEEEcccchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcCCCeE
Q 023747 147 NANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTL 224 (278)
Q Consensus 147 ~~~v~~l~~~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~~Ptl 224 (278)
++....++.++|++.+ +.+++++|+||++||++|+.+.|.+.+++..+. ++.|+.+|++.+ ++ .+|++.++|++
T Consensus 8 ~~~~~~~~~~~f~~~~-~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~---~v~~~~vd~~~~~~~~~~~~v~~~Pt~ 83 (112)
T 1syr_A 8 HMVKIVTSQAEFDSII-SQNELVIVDFFAEWCGPCKRIAPFYEECSKTYT---KMVFIKVDVDEVSEVTEKENITSMPTF 83 (112)
T ss_dssp -CCEEECSHHHHHHHH-HHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTTHHHHHHTTCCSSSEE
T ss_pred eeEEEECCHHHHHHHH-ccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC---CCEEEEEECCCCHHHHHHcCCCcccEE
Confidence 4457788999999988 578899999999999999999999999999986 499999999988 55 58999999999
Q ss_pred EEEeCCCccCceEecCCCCHHHHHHHHHHHh
Q 023747 225 LFYPAGDKANPIKVSARSSSKNIAAFIKEQL 255 (278)
Q Consensus 225 ~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~ 255 (278)
++|++|+.+. ++.|. +.+.|.+||++.+
T Consensus 84 ~~~~~G~~~~--~~~G~-~~~~l~~~l~~~l 111 (112)
T 1syr_A 84 KVYKNGSSVD--TLLGA-NDSALKQLIEKYA 111 (112)
T ss_dssp EEEETTEEEE--EEESC-CHHHHHHHHHTTC
T ss_pred EEEECCcEEE--EEeCC-CHHHHHHHHHHhh
Confidence 9999887653 68888 9999999998754
No 81
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.68 E-value=2.7e-16 Score=117.53 Aligned_cols=104 Identities=20% Similarity=0.412 Sum_probs=89.4
Q ss_pred CCCCeEEE-cccchHHHhhc---CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCc
Q 023747 146 TNANVQIV-VGKTFDDLVLN---SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVE 219 (278)
Q Consensus 146 ~~~~v~~l-~~~~~~~~i~~---~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~ 219 (278)
..+.|..+ +.++|++.+.. .+++++|+||++||++|+.+.|.+++++..+. ++.|+.+|++.+ ++ .+|++.
T Consensus 14 ~~~~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~---~v~~~~vd~d~~~~l~~~~~v~ 90 (124)
T 1xfl_A 14 EEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP---NVLFLKVDTDELKSVASDWAIQ 90 (124)
T ss_dssp CCSCCEEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS---SEEEEEEETTTSHHHHHHTTCC
T ss_pred CCCcEEEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC---CcEEEEEECccCHHHHHHcCCC
Confidence 34567778 66899988865 48899999999999999999999999999986 599999999988 56 589999
Q ss_pred CCCeEEEEeCCCccCceEecCCCCHHHHHHHHHHHh
Q 023747 220 EYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQL 255 (278)
Q Consensus 220 ~~Ptl~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~ 255 (278)
++|++++|++|+.+. ++.| .+.+.|.++|.+.+
T Consensus 91 ~~Pt~~~~~~G~~~~--~~~G-~~~~~l~~~l~~~l 123 (124)
T 1xfl_A 91 AMPTFMFLKEGKILD--KVVG-AKKDELQSTIAKHL 123 (124)
T ss_dssp SSSEEEEEETTEEEE--EEES-CCHHHHHHHHHHHC
T ss_pred ccCEEEEEECCEEEE--EEeC-CCHHHHHHHHHHhc
Confidence 999999999887653 6777 58999999998865
No 82
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.68 E-value=2.1e-16 Score=131.23 Aligned_cols=109 Identities=28% Similarity=0.542 Sum_probs=96.8
Q ss_pred CCCCeEEEcccchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCC-ceEEEEEeCCCC-CC-CCCCCcCCC
Q 023747 146 TNANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLD-NLVIAKIDASAN-EH-PKLQVEEYP 222 (278)
Q Consensus 146 ~~~~v~~l~~~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~-~~~~~~vd~~~~-~~-~~~~i~~~P 222 (278)
....|..+++++|++.+ ..+++++|+||++||++|+.+.|.|.++++.+++.+ ++.++.+|++.+ ++ .+|+|.++|
T Consensus 13 ~~~~v~~l~~~~~~~~~-~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~P 91 (241)
T 3idv_A 13 EENGVLVLNDANFDNFV-ADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSASVLASRFDVSGYP 91 (241)
T ss_dssp EETTEEEECTTTHHHHH-TTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSSS
T ss_pred cCCCcEEecccCHHHHH-hcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCCHHHHHhcCCCcCC
Confidence 45679999999999987 557899999999999999999999999999998632 499999999988 66 589999999
Q ss_pred eEEEEeCCCccCceEecCCCCHHHHHHHHHHHhccc
Q 023747 223 TLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKEK 258 (278)
Q Consensus 223 tl~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~~~~ 258 (278)
|+++|++|+.+ .|.|..+.+.|.+|+.+.+.+.
T Consensus 92 t~~~~~~g~~~---~~~g~~~~~~l~~~i~~~~~~~ 124 (241)
T 3idv_A 92 TIKILKKGQAV---DYEGSRTQEEIVAKVREVSQPD 124 (241)
T ss_dssp EEEEEETTEEE---ECCSCSCHHHHHHHHHHHHSTT
T ss_pred EEEEEcCCCcc---cccCcccHHHHHHHHhhccCcc
Confidence 99999988743 7999999999999999998764
No 83
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.67 E-value=3e-16 Score=113.23 Aligned_cols=96 Identities=19% Similarity=0.447 Sum_probs=84.1
Q ss_pred cccchHHHhhc-CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcCCCeEEEEeCC
Q 023747 154 VGKTFDDLVLN-SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTLLFYPAG 230 (278)
Q Consensus 154 ~~~~~~~~i~~-~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~~Ptl~~f~~g 230 (278)
+.++|++.+.. .+++++|.||++||++|+.+.|.+++++..+.+ +.|+.+|++.+ ++ .+|++.++|++++|++|
T Consensus 7 ~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~---~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g 83 (105)
T 3m9j_A 7 SKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN---VIFLEVDVDDCQDVASESEVKSMPTFQFFKKG 83 (105)
T ss_dssp SHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT---SEEEEEETTTCHHHHHHTTCCBSSEEEEEETT
T ss_pred CHHHHHHHHHhcCCCeEEEEEECCCChhhHHHHHHHHHHHHHccC---eEEEEEEhhhhHHHHHHcCCCcCcEEEEEECC
Confidence 45788887754 488999999999999999999999999999974 99999999988 55 58999999999999988
Q ss_pred CccCceEecCCCCHHHHHHHHHHHh
Q 023747 231 DKANPIKVSARSSSKNIAAFIKEQL 255 (278)
Q Consensus 231 ~~~~~~~~~g~~~~~~l~~~i~~~~ 255 (278)
+.+. ++.|. +.+.|.+||++++
T Consensus 84 ~~~~--~~~g~-~~~~l~~~l~~~l 105 (105)
T 3m9j_A 84 QKVG--EFSGA-NKEKLEATINELV 105 (105)
T ss_dssp EEEE--EEESS-CHHHHHHHHHHHC
T ss_pred eEEE--EEeCC-CHHHHHHHHHHhC
Confidence 7654 68888 9999999998764
No 84
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.67 E-value=3.4e-16 Score=117.32 Aligned_cols=105 Identities=8% Similarity=0.023 Sum_probs=88.0
Q ss_pred ccccccCCCCceeeeeeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhc-----CceEEEEEeCCCcccchhHHHHcC
Q 023747 17 CTLISNLPTTSLELLKVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFK-----GKIMFTAVDIADEDLAKPFLTLFG 90 (278)
Q Consensus 17 ~~~v~~~~~~~~~~~~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~-----~~v~f~~vd~~~~~~~~~l~~~~~ 90 (278)
..++.++.+++...+. +.+++++|.||++| ++|+.+.|.|+++|..+. +.+.|+.|||+.+ +.+|++|+
T Consensus 15 ~~v~~l~~~~f~~~~~--~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~---~~l~~~~~ 89 (127)
T 3h79_A 15 SRVVELTDETFDSIVM--DPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKY---PDVIERMR 89 (127)
T ss_dssp CCCEECCTTTHHHHHT--CTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTC---HHHHHHTT
T ss_pred CceEECChhhHHHHHh--CCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEcccc---HhHHHhcC
Confidence 3467788888776554 35789999999999 999999999999998763 5699999999999 99999999
Q ss_pred CCCCCceEEEEecCCcc-eeecCCCCCChHHHHHHHHHH
Q 023747 91 LEESKNTVVTAFDNKAI-SKFLLESDLTPSNIEEFCSRL 128 (278)
Q Consensus 91 i~~~~Ptl~~~~~~~~~-~~~~~~g~~~~~~i~~fi~~~ 128 (278)
|.++ ||+ .++..+.. ..+.|.|.++.++|.+|+.+.
T Consensus 90 v~~~-Pt~-~~~~~g~~~~~~~~~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 90 VSGF-PTM-RYYTRIDKQEPFEYSGQRYLSLVDSFVFQN 126 (127)
T ss_dssp CCSS-SEE-EEECSSCSSSCEECCSCCCHHHHHHHHHHH
T ss_pred CccC-CEE-EEEeCCCCCCceEecCCccHHHHHHHHHhc
Confidence 9999 999 66655433 336679999999999999874
No 85
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.67 E-value=7.4e-17 Score=121.18 Aligned_cols=94 Identities=22% Similarity=0.412 Sum_probs=81.3
Q ss_pred cchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcCCCeEEEEeCCCcc
Q 023747 156 KTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTLLFYPAGDKA 233 (278)
Q Consensus 156 ~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~~Ptl~~f~~g~~~ 233 (278)
.++.+.....+++++|.||++||++|+.+.|.++++++.+.+ ++.++.||++.+ ++ .+|+|.++|++++|++|+.+
T Consensus 32 ~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~--~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~~ 109 (128)
T 3ul3_B 32 SNIINGVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGK--RIYLLKVDLDKNESLARKFSVKSLPTIILLKNKTML 109 (128)
T ss_dssp CSSSSBTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG--GEEEEEEEGGGCHHHHHHTTCCSSSEEEEEETTEEE
T ss_pred ccHHHHHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC--CeEEEEEECCCCHHHHHHcCCCCcCEEEEEECCEEE
Confidence 333333446689999999999999999999999999999986 799999999988 66 58999999999999888765
Q ss_pred CceEecCCCCHHHHHHHHHH
Q 023747 234 NPIKVSARSSSKNIAAFIKE 253 (278)
Q Consensus 234 ~~~~~~g~~~~~~l~~~i~~ 253 (278)
. ++.|..+.++|.+||++
T Consensus 110 ~--~~~G~~~~~~l~~~l~~ 127 (128)
T 3ul3_B 110 A--RKDHFVSSNDLIALIKK 127 (128)
T ss_dssp E--EESSCCCHHHHHHHHTT
T ss_pred E--EecCCCCHHHHHHHHHh
Confidence 3 78999999999999975
No 86
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.67 E-value=7.5e-16 Score=117.96 Aligned_cols=102 Identities=16% Similarity=0.242 Sum_probs=84.4
Q ss_pred cccchHHHhhc-CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcCCCeEEEEeCC
Q 023747 154 VGKTFDDLVLN-SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTLLFYPAG 230 (278)
Q Consensus 154 ~~~~~~~~i~~-~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~~Ptl~~f~~g 230 (278)
+.++|++.+.+ .+++++|.||++||++|+.+.|.++++++.+.+ ++.|+.||++.+ ++ .+|+|.++||+++|++|
T Consensus 10 ~~~~~~~~v~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~--~v~~~~vd~d~~~~~~~~~~i~~~Pt~~~~~~G 87 (142)
T 1qgv_A 10 NGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKN--FAVIYLVDITEVPDFNKMYELYDPCTVMFFFRN 87 (142)
T ss_dssp SHHHHHHHHHTCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT--TEEEEEEETTTCCTTTTSSCSCSSCEEEEEETT
T ss_pred CHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC--CeEEEEEccccCHHHHHHcCCCCCCEEEEEECC
Confidence 46888877765 688999999999999999999999999999976 699999999988 66 58999999999999988
Q ss_pred CccCc-------eEecCCC-CHHHHHHHHHHHhcc
Q 023747 231 DKANP-------IKVSARS-SSKNIAAFIKEQLKE 257 (278)
Q Consensus 231 ~~~~~-------~~~~g~~-~~~~l~~~i~~~~~~ 257 (278)
+.+.. .+..|.. +.+.+.++|.+.+..
T Consensus 88 ~~v~~~~g~~~~~~~~g~~~~~~~l~~~i~~~~~~ 122 (142)
T 1qgv_A 88 KHIMIDLGTGNNNKINWAMEDKQEMVDIIETVYRG 122 (142)
T ss_dssp EEEEEECC------CCSCCSCHHHHHHHHHHHHHH
T ss_pred cEEEEecCCCCcceeeeecCcHHHHHHHHHHHHHH
Confidence 76520 0234555 489999999887753
No 87
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.66 E-value=3.9e-18 Score=129.79 Aligned_cols=106 Identities=15% Similarity=0.333 Sum_probs=89.4
Q ss_pred CCCeEEEcccchHHHhhcCC-CcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCc----
Q 023747 147 NANVQIVVGKTFDDLVLNSH-KDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVE---- 219 (278)
Q Consensus 147 ~~~v~~l~~~~~~~~i~~~~-~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~---- 219 (278)
+..+..++.++|++.+.... ++++|+||++||++|+.+.|.|.+++..+.+. ++.|+.||++.+ ++ .+|++.
T Consensus 6 ~~~v~~l~~~~f~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~-~v~~~~vd~~~~~~~~~~~~v~~~~~ 84 (137)
T 2dj0_A 6 SGYIKYFNDKTIDEELERDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCT-GLNFGKVDVGRYTDVSTRYKVSTSPL 84 (137)
T ss_dssp CSCCEECCTTHHHHHHHHSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSS-SCEEEECCTTTCHHHHHHTTCCCCSS
T ss_pred CceEEEccHhhHHHHHhcCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCC-CeEEEEEeCccCHHHHHHccCcccCC
Confidence 34689999999999986654 48999999999999999999999999999742 699999999988 55 589998
Q ss_pred --CCCeEEEEeCCCccCceEecCCCCHHHHHHHHHHHh
Q 023747 220 --EYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQL 255 (278)
Q Consensus 220 --~~Ptl~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~ 255 (278)
++||+++|++|+.+. ++.|..+.+.|.+||.++.
T Consensus 85 ~~~~Pt~~~~~~G~~~~--~~~G~~~~~~l~~~l~~~~ 120 (137)
T 2dj0_A 85 TKQLPTLILFQGGKEAM--RRPQIDKKGRAVSWTFSEE 120 (137)
T ss_dssp SSCSSEEEEESSSSEEE--EESCBCSSSCBCCCCCCHH
T ss_pred cCCCCEEEEEECCEEEE--EecCcCchHHHHHHHhccc
Confidence 999999999887654 6788887777777775543
No 88
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.66 E-value=9.5e-15 Score=128.30 Aligned_cols=193 Identities=12% Similarity=0.138 Sum_probs=150.3
Q ss_pred cCCceEEEEEeCccchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCceEEEEecCCcceeecCCCC
Q 023747 36 IDTLDMVYVFAKADDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFDNKAISKFLLESD 115 (278)
Q Consensus 36 ~~~~~~v~F~~~~~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Ptl~~~~~~~~~~~~~~~g~ 115 (278)
....++|.||.++ |....+.|.++|..+++.+.|+.++ + ..+|+++++. + |++ .++.........|.|.
T Consensus 141 ~~~~~vv~ff~~~--~~~~~~~~~~~A~~~~~~~~f~~~~---~---~~~~~~~~v~-~-p~i-~~~~~~~~~~~~y~g~ 209 (350)
T 1sji_A 141 EDQIKLIGFFKSE--ESEYYKAFEEAAEHFQPYIKFFATF---D---KGVAKKLSLK-M-NEV-DFYEPFMDEPIAIPDK 209 (350)
T ss_dssp CSSCEEEEECSCT--TSHHHHHHHHHHHHTTTTSEEEEEC---C---HHHHHHHTCC-T-TCE-EEECTTCSSCEECSSS
T ss_pred CCCcEEEEEECCC--CcHHHHHHHHHHHhhccCcEEEEEC---C---HHHHHHcCCC-C-CcE-EEEeCCCCCceecCCC
Confidence 4567899999987 5667899999999999889999873 4 6799999999 8 999 6665433345567887
Q ss_pred -CChHHHHHHHHHHhcCcccccccCCCCCCCCCCCeEEEcccchHHHhhcCC-CcEEEEEECCCChhHHHHHHHHHHHHH
Q 023747 116 -LTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIVVGKTFDDLVLNSH-KDVLLEVYTPWCVTCETTSKQIEKLAK 193 (278)
Q Consensus 116 -~~~~~i~~fi~~~~~~~~~~~~~s~~~p~~~~~~v~~l~~~~~~~~i~~~~-~~~~v~f~~~~c~~c~~~~~~~~~~a~ 193 (278)
.+.++|.+|+.+.. ...|..++.+++.++....- +..++.|+.++|+.|..+.+.++++|+
T Consensus 210 ~~~~~~l~~fi~~~~-----------------~p~v~elt~~~~~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vA~ 272 (350)
T 1sji_A 210 PYTEEELVEFVKEHQ-----------------RPTLRRLRPEDMFETWEDDLNGIHIVAFAERSDPDGYEFLEILKQVAR 272 (350)
T ss_dssp SCCHHHHHHHHHHHC-----------------CCSEEECCTTTHHHHHHSCSSSEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcC-----------------ccchhhcChhhHHHHhcCCCCCcEEEEEEcCCCccHHHHHHHHHHHHH
Confidence 99999999999853 22489999999999764332 445667999999999999999999999
Q ss_pred HhcCCCceEEEEEeCCCCC-CC-----CCCCc-CCCeEEEEeCCCccCceE--e---cCCCCHHHHHHHHHHHhcc
Q 023747 194 HFKGLDNLVIAKIDASANE-HP-----KLQVE-EYPTLLFYPAGDKANPIK--V---SARSSSKNIAAFIKEQLKE 257 (278)
Q Consensus 194 ~~~~~~~~~~~~vd~~~~~-~~-----~~~i~-~~Ptl~~f~~g~~~~~~~--~---~g~~~~~~l~~~i~~~~~~ 257 (278)
.+++..++.|+.+|++... +. .+++. .+|+++++...+.. .+. + .+..+.++|.+|+.+.+.-
T Consensus 273 ~~~~~~~~~f~~id~~~~~~~~~~~~~~~gi~~~~P~~~i~~~~~~~-~~~~~~~~~~~~~~~~~i~~F~~d~~~G 347 (350)
T 1sji_A 273 DNTDNPDLSIVWIDPDDFPLLVAYWEKTFKIDLFKPQIGVVNVTDAD-SVWMEIPDDDDLPTAEELEDWIEDVLSG 347 (350)
T ss_dssp HGGGCSSCCEEEECGGGCHHHHHHHHHHCCSCTTSCEEEEEESSSSC-EEESCSSCCSCCCCHHHHHHHHHHHHTS
T ss_pred HhCCCCceEEEEECchhhHHHHHHHHhhcCCCccCCcEEEEeccccc-ccccCCCcccccCCHHHHHHHHHHHhcC
Confidence 9985336999999998763 22 46776 58999999753321 222 2 2478999999999988753
No 89
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.66 E-value=7e-16 Score=128.74 Aligned_cols=113 Identities=19% Similarity=0.373 Sum_probs=94.8
Q ss_pred CCCCeEEEcccchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCC-CceEEEEEeCC--CC-CC-CCCCCcC
Q 023747 146 TNANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGL-DNLVIAKIDAS--AN-EH-PKLQVEE 220 (278)
Q Consensus 146 ~~~~v~~l~~~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~-~~~~~~~vd~~--~~-~~-~~~~i~~ 220 (278)
....|..++.++|++.+...+++++|.|||+||++|+.+.|.|+++++.+.+. ..+.|+.|||+ .+ ++ .+|+|.+
T Consensus 10 ~~~~v~~l~~~~f~~~i~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~v~~ 89 (244)
T 3q6o_A 10 PSDPLTLLQADTVRGAVLGSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRDFNIPG 89 (244)
T ss_dssp TTSSSEEECTTTHHHHHSSCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHHHTTCCS
T ss_pred CCCCceeCChhhHHHHHhhCCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHHHcCCCc
Confidence 45679999999999999888899999999999999999999999999999752 26999999995 44 45 4899999
Q ss_pred CCeEEEEeCCCccC---ceEecCCCCHHHHHHHHHHHhcccC
Q 023747 221 YPTLLFYPAGDKAN---PIKVSARSSSKNIAAFIKEQLKEKD 259 (278)
Q Consensus 221 ~Ptl~~f~~g~~~~---~~~~~g~~~~~~l~~~i~~~~~~~~ 259 (278)
+||+++|++|++.. .+.+.| .+.+.|.+||.+.++...
T Consensus 90 ~Pt~~~~~~g~~~~~g~~~~~~g-~~~~~l~~~i~~~l~~~~ 130 (244)
T 3q6o_A 90 FPTVRFFXAFTXNGSGAVFPVAG-ADVQTLRERLIDALESHH 130 (244)
T ss_dssp SSEEEEECTTCCSSSCEECCCTT-CCHHHHHHHHHHHHHTCT
T ss_pred cCEEEEEeCCCcCCCCeeEecCC-CCHHHHHHHHHHHHHhcc
Confidence 99999999876542 223455 799999999999987544
No 90
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.66 E-value=1e-16 Score=133.27 Aligned_cols=128 Identities=15% Similarity=0.224 Sum_probs=99.9
Q ss_pred HHHHHHhcCcccccccCCCCCCCCCCCeEEE-cccchHHHhhcC--CCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCC
Q 023747 123 EFCSRLLHGTLTPYLKSQPIPDNTNANVQIV-VGKTFDDLVLNS--HKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLD 199 (278)
Q Consensus 123 ~fi~~~~~~~~~~~~~s~~~p~~~~~~v~~l-~~~~~~~~i~~~--~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~ 199 (278)
+|++++..+++.++.++.+ +....+.|..+ +.++|.+.+... +++++|.||++||++|+.+.|.|.+++..+.
T Consensus 88 ~fL~~~r~~Rl~el~~~~~-~~~~~G~V~ei~s~~~f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~--- 163 (245)
T 1a0r_P 88 NCLRKYRRQCMQDMHQKLS-FGPRYGFVYELESGEQFLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYP--- 163 (245)
T ss_dssp HHHHHHHHHHHHHHHHHHC-CCCCCCSEEECCSHHHHHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCT---
T ss_pred HHHHHHHHHHHHHHHHHhh-ccCCCCeEEEeCCHHHHHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC---
Confidence 4566665556666554432 33345678888 789999998653 7899999999999999999999999999997
Q ss_pred ceEEEEEeCCCCCC-CCCCCcCCCeEEEEeCCCccCceEecCC-------CCHHHHHHHHHHHhc
Q 023747 200 NLVIAKIDASANEH-PKLQVEEYPTLLFYPAGDKANPIKVSAR-------SSSKNIAAFIKEQLK 256 (278)
Q Consensus 200 ~~~~~~vd~~~~~~-~~~~i~~~Ptl~~f~~g~~~~~~~~~g~-------~~~~~l~~~i~~~~~ 256 (278)
.+.|+.||++..++ .+|+|.++||+++|++|+.+. .+.|. ++.+.|..||.++-.
T Consensus 164 ~v~f~kVd~d~~~l~~~~~I~~~PTll~~~~G~~v~--~~vG~~~~~g~~~~~e~Le~~L~~~g~ 226 (245)
T 1a0r_P 164 MVKFCKIKASNTGAGDRFSSDVLPTLLVYKGGELLS--NFISVTEQLAEEFFTGDVESFLNEYGL 226 (245)
T ss_dssp TSEEEEEEHHHHCCTTSSCTTTCSEEEEEETTEEEE--EETTGGGGSCTTCCHHHHHHHHHTTTC
T ss_pred CCEEEEEeCCcHHHHHHCCCCCCCEEEEEECCEEEE--EEeCCcccccccccHHHHHHHHHHcCC
Confidence 49999999987555 589999999999999887653 44442 567889999987643
No 91
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.66 E-value=6.1e-17 Score=132.73 Aligned_cols=126 Identities=17% Similarity=0.309 Sum_probs=100.5
Q ss_pred HHHHHHHhcCcccccccCCCCCCCCCCCeEEE-cccchHHHhhcCC--CcEEEEEECCCChhHHHHHHHHHHHHHHhcCC
Q 023747 122 EEFCSRLLHGTLTPYLKSQPIPDNTNANVQIV-VGKTFDDLVLNSH--KDVLLEVYTPWCVTCETTSKQIEKLAKHFKGL 198 (278)
Q Consensus 122 ~~fi~~~~~~~~~~~~~s~~~p~~~~~~v~~l-~~~~~~~~i~~~~--~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~ 198 (278)
.+|++++..+++....++.+ +....+.|..+ +.++|.+.+.+.+ ++++|+||++||++|+.+.|.|.+++..+.
T Consensus 74 ~~fl~~~r~~Rl~el~~~~~-~~~~~g~v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~-- 150 (217)
T 2trc_P 74 EGCLRKYRRQCMQDMHQKLS-FGPRYGFVYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYP-- 150 (217)
T ss_dssp HHHHHHHHHHHHHHHHHHHC-CCCCCCSEEECCSHHHHHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT--
T ss_pred HHHHHHHHHHHHHHHHHHHH-hccCCCeEEEcCCHHHHHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCC--
Confidence 45777776666665544332 33345678888 8899999997654 899999999999999999999999999985
Q ss_pred CceEEEEEeCCCC-CC-CCCCCcCCCeEEEEeCCCccCceEecCCCC-------HHHHHHHHHHH
Q 023747 199 DNLVIAKIDASAN-EH-PKLQVEEYPTLLFYPAGDKANPIKVSARSS-------SKNIAAFIKEQ 254 (278)
Q Consensus 199 ~~~~~~~vd~~~~-~~-~~~~i~~~Ptl~~f~~g~~~~~~~~~g~~~-------~~~l~~~i~~~ 254 (278)
++.|+.||++ + ++ .+|+|.++||+++|++|+.+. .+.|..+ .+.|..||.++
T Consensus 151 -~v~f~~vd~~-~~~l~~~~~i~~~PTl~~~~~G~~v~--~~~G~~~~~g~~~~~~~Le~~L~~~ 211 (217)
T 2trc_P 151 -MVKFCKIRAS-NTGAGDRFSSDVLPTLLVYKGGELIS--NFISVAEQFAEDFFAADVESFLNEY 211 (217)
T ss_dssp -TSEEEEEEHH-HHTCSTTSCGGGCSEEEEEETTEEEE--EETTGGGGSCSSCCHHHHHHHHHTT
T ss_pred -CeEEEEEECC-cHHHHHHCCCCCCCEEEEEECCEEEE--EEeCCcccCcccCCHHHHHHHHHHc
Confidence 5999999998 5 56 589999999999999887653 6676554 48999999865
No 92
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.66 E-value=6.5e-16 Score=119.74 Aligned_cols=107 Identities=19% Similarity=0.423 Sum_probs=90.5
Q ss_pred CCCeEEEc-ccchHHHhhcC-CCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcCCC
Q 023747 147 NANVQIVV-GKTFDDLVLNS-HKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYP 222 (278)
Q Consensus 147 ~~~v~~l~-~~~~~~~i~~~-~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~~P 222 (278)
.+.+..++ .++|.+.+... +++++|.||++||++|+.+.|.+.+++..+. ++.|+.||++.+ ++ .+|+|.++|
T Consensus 11 ~~~v~~l~~~~~~~~~~~~~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~---~v~~~~vd~~~~~~l~~~~~v~~~P 87 (153)
T 2wz9_A 11 VAAVEEVGSAGQFEELLRLKAKSLLVVHFWAPWAPQCAQMNEVMAELAKELP---QVSFVKLEAEGVPEVSEKYEISSVP 87 (153)
T ss_dssp -CCSEEECSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTSHHHHHHTTCCSSS
T ss_pred cCCeEEcCCHHHHHHHHHhcCCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC---CeEEEEEECCCCHHHHHHcCCCCCC
Confidence 44678887 48999887554 7899999999999999999999999999984 699999999988 56 589999999
Q ss_pred eEEEEeCCCccCceEecCCCCHHHHHHHHHHHhcccC
Q 023747 223 TLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKEKD 259 (278)
Q Consensus 223 tl~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~~~~~ 259 (278)
++++|++|+.+. ++.| .+.+.|.+||.+.++...
T Consensus 88 t~~~~~~G~~~~--~~~G-~~~~~l~~~i~~~l~~~~ 121 (153)
T 2wz9_A 88 TFLFFKNSQKID--RLDG-AHAPELTKKVQRHASSGS 121 (153)
T ss_dssp EEEEEETTEEEE--EEES-SCHHHHHHHHHHHSCTTS
T ss_pred EEEEEECCEEEE--EEeC-CCHHHHHHHHHHHhcccc
Confidence 999999776543 5677 578899999999997654
No 93
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.66 E-value=1.8e-16 Score=116.66 Aligned_cols=101 Identities=16% Similarity=0.361 Sum_probs=83.5
Q ss_pred CCCeEEEcccchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcCCCeE
Q 023747 147 NANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTL 224 (278)
Q Consensus 147 ~~~v~~l~~~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~~Ptl 224 (278)
.+.+..+++.+..+.+...+++++|.||++||++|+.+.|.+.+++..+.+ +.|+.+|++.+ ++ .+|++.++|++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~---v~~~~vd~~~~~~l~~~~~v~~~Pt~ 87 (114)
T 2oe3_A 11 YTSITKLTNLTEFRNLIKQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD---VRFVKCDVDESPDIAKECEVTAMPTF 87 (114)
T ss_dssp GGGSCBCCSHHHHHHHHHHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT---SEEEEEETTTCHHHHHHTTCCSBSEE
T ss_pred hhheeecCCHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC---CEEEEEECCCCHHHHHHCCCCcccEE
Confidence 345666666444433446788999999999999999999999999999874 99999999988 56 58999999999
Q ss_pred EEEeCCCccCceEecCCCCHHHHHHHHHH
Q 023747 225 LFYPAGDKANPIKVSARSSSKNIAAFIKE 253 (278)
Q Consensus 225 ~~f~~g~~~~~~~~~g~~~~~~l~~~i~~ 253 (278)
++|++|+.+. ++.|.. .+.|.+||++
T Consensus 88 ~~~~~G~~~~--~~~G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 88 VLGKDGQLIG--KIIGAN-PTALEKGIKD 113 (114)
T ss_dssp EEEETTEEEE--EEESSC-HHHHHHHHHT
T ss_pred EEEeCCeEEE--EEeCCC-HHHHHHHHHh
Confidence 9999887654 688888 8999999864
No 94
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.66 E-value=2.4e-16 Score=117.21 Aligned_cols=105 Identities=20% Similarity=0.470 Sum_probs=89.7
Q ss_pred CCCCeEEEcc-cchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcCCC
Q 023747 146 TNANVQIVVG-KTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYP 222 (278)
Q Consensus 146 ~~~~v~~l~~-~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~~P 222 (278)
....+..+++ ++|++.+ ..+++++|+||++||++|+.+.|.+.+++..+.+. ++.|+.+|++.+ ++ .+|++.++|
T Consensus 13 ~~~~~~~i~~~~~f~~~l-~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~-~v~~~~vd~d~~~~~~~~~~v~~~P 90 (121)
T 2j23_A 13 PRGSVQVISSYDQFKQVT-GGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGD-KVGFYKVDVDEQSQIAQEVGIRAMP 90 (121)
T ss_dssp CCCCEEECCSHHHHHHHH-SSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHH-HSEEEEEETTTCHHHHHHHTCCSSS
T ss_pred CCcceEEcCCHHHHHHHH-cCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCC-cEEEEEEECcCCHHHHHHcCCCccc
Confidence 3445777766 8898887 77889999999999999999999999999988752 399999999988 56 589999999
Q ss_pred eEEEEeCCCccCceEecCCCCHHHHHHHHHHHh
Q 023747 223 TLLFYPAGDKANPIKVSARSSSKNIAAFIKEQL 255 (278)
Q Consensus 223 tl~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~ 255 (278)
++++|++|+.+. ++.|. +.+.|.+||.+.+
T Consensus 91 t~~~~~~G~~~~--~~~G~-~~~~l~~~l~~~l 120 (121)
T 2j23_A 91 TFVFFKNGQKID--TVVGA-DPSKLQAAITQHS 120 (121)
T ss_dssp EEEEEETTEEEE--EEESS-CHHHHHHHHHHHT
T ss_pred EEEEEECCeEEe--eEcCC-CHHHHHHHHHHhh
Confidence 999999887653 67888 9999999998865
No 95
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.65 E-value=4.3e-16 Score=113.92 Aligned_cols=103 Identities=20% Similarity=0.427 Sum_probs=88.2
Q ss_pred CCeEEE-cccchHHHhhc---CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcCC
Q 023747 148 ANVQIV-VGKTFDDLVLN---SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEY 221 (278)
Q Consensus 148 ~~v~~l-~~~~~~~~i~~---~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~~ 221 (278)
+.+..+ +.++|.+.+.. .+++++|+||++||++|+.+.+.+++++..+. ++.|+.+|++.+ ++ .+|++.++
T Consensus 4 ~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~---~v~~~~v~~~~~~~~~~~~~v~~~ 80 (113)
T 1ti3_A 4 GQVIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP---NVTFLKVDVDELKAVAEEWNVEAM 80 (113)
T ss_dssp CCEEEECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS---SEEEEEEETTTCHHHHHHHHCSST
T ss_pred CceeEeccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC---CcEEEEEEccccHHHHHhCCCCcc
Confidence 457777 56899998865 47899999999999999999999999999986 599999999988 55 58999999
Q ss_pred CeEEEEeCCCccCceEecCCCCHHHHHHHHHHHhc
Q 023747 222 PTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLK 256 (278)
Q Consensus 222 Ptl~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~~ 256 (278)
|++++|++|+.+. ++.| .+.+.|.++|.+.+.
T Consensus 81 Pt~~~~~~G~~~~--~~~g-~~~~~l~~~l~~~~~ 112 (113)
T 1ti3_A 81 PTFIFLKDGKLVD--KTVG-ADKDGLPTLVAKHAT 112 (113)
T ss_dssp TEEEEEETTEEEE--EEEC-CCTTHHHHHHHHHHH
T ss_pred cEEEEEeCCEEEE--EEec-CCHHHHHHHHHHhhc
Confidence 9999999887653 5677 688999999998764
No 96
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.65 E-value=2.6e-16 Score=117.69 Aligned_cols=95 Identities=17% Similarity=0.211 Sum_probs=82.4
Q ss_pred cCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEe--CCCC-CC-CCCCCcCCCeEEEEe-CCCccCceEe
Q 023747 164 NSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKID--ASAN-EH-PKLQVEEYPTLLFYP-AGDKANPIKV 238 (278)
Q Consensus 164 ~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd--~~~~-~~-~~~~i~~~Ptl~~f~-~g~~~~~~~~ 238 (278)
..+++++|+||++||++|+.+.|.+.+++..+.. ++.++.|| ++.+ ++ .+|++.++|++++|. +|+... ++
T Consensus 24 ~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~--~v~~~~v~~~~d~~~~~~~~~~v~~~Pt~~~~~~~G~~~~--~~ 99 (126)
T 2l57_A 24 KEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREG--KFNIYYARLEEEKNIDLAYKYDANIVPTTVFLDKEGNKFY--VH 99 (126)
T ss_dssp CSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSS--SCEEEEEETTSSHHHHHHHHTTCCSSSEEEEECTTCCEEE--EE
T ss_pred hCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcC--CeEEEEEeCCCCchHHHHHHcCCcceeEEEEECCCCCEEE--Ee
Confidence 5578999999999999999999999999999974 79999999 7776 55 589999999999998 666543 78
Q ss_pred cCCCCHHHHHHHHHHHhcccCCCC
Q 023747 239 SARSSSKNIAAFIKEQLKEKDQSP 262 (278)
Q Consensus 239 ~g~~~~~~l~~~i~~~~~~~~~~~ 262 (278)
.|..+.+.|.+||+++++.....+
T Consensus 100 ~G~~~~~~l~~~l~~~~~~~~~~~ 123 (126)
T 2l57_A 100 QGLMRKNNIETILNSLGVKEGHHH 123 (126)
T ss_dssp ESCCCHHHHHHHHHHHCCCCCCCC
T ss_pred cCCCCHHHHHHHHHHHhccccccc
Confidence 899999999999999998766443
No 97
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.65 E-value=1.7e-16 Score=116.07 Aligned_cols=102 Identities=20% Similarity=0.320 Sum_probs=84.9
Q ss_pred eEEEcccchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcCCCeEEEE
Q 023747 150 VQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTLLFY 227 (278)
Q Consensus 150 v~~l~~~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~~Ptl~~f 227 (278)
+..++.++| +.+ ..+++++|.||++||++|+.+.|.+.+++..+. ++.|+.+|++.+ ++ .+|++.++|++++|
T Consensus 5 ~~~~~~~~f-~~~-~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~---~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 79 (110)
T 2l6c_A 5 RDITTEAGM-AHF-EGLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP---QVAISSVDSEARPELMKELGFERVPTLVFI 79 (110)
T ss_dssp SBCGGGCSH-HHH-TTCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT---TSCEEEEEGGGCHHHHHHTTCCSSCEEEEE
T ss_pred eecCCHHHH-HHH-HcCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC---CcEEEEEcCcCCHHHHHHcCCcccCEEEEE
Confidence 345678899 555 456889999999999999999999999998875 589999999888 56 58999999999999
Q ss_pred eCCCccCceEecCCCCHHHHHHHHHHHhccc
Q 023747 228 PAGDKANPIKVSARSSSKNIAAFIKEQLKEK 258 (278)
Q Consensus 228 ~~g~~~~~~~~~g~~~~~~l~~~i~~~~~~~ 258 (278)
++|+.+. ++.|..+.+.|.+++....+++
T Consensus 80 ~~G~~v~--~~~G~~~~~~l~~~~~~~~~~~ 108 (110)
T 2l6c_A 80 RDGKVAK--VFSGIMNPRELQALYASIHHHH 108 (110)
T ss_dssp ESSSEEE--EEESCCCHHHHHHHHHTC----
T ss_pred ECCEEEE--EEcCCCCHHHHHHHHHHHhhhc
Confidence 9888754 7889999999999998877654
No 98
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=99.65 E-value=6.4e-16 Score=128.64 Aligned_cols=106 Identities=13% Similarity=0.298 Sum_probs=91.2
Q ss_pred CCCeEEEcccchHHHhhcCCCcEEEEEE--CCCChhHHHHHHHHHHHHHHhcC-CCceEEEEEeCCC-----C-CC-CCC
Q 023747 147 NANVQIVVGKTFDDLVLNSHKDVLLEVY--TPWCVTCETTSKQIEKLAKHFKG-LDNLVIAKIDASA-----N-EH-PKL 216 (278)
Q Consensus 147 ~~~v~~l~~~~~~~~i~~~~~~~~v~f~--~~~c~~c~~~~~~~~~~a~~~~~-~~~~~~~~vd~~~-----~-~~-~~~ 216 (278)
...|..++..+|++++ ..+++++|.|| ||||+ +.|.|+++|..+.+ .+++.|+.|||+. + ++ .+|
T Consensus 15 ~~~v~~Lt~~nF~~vi-~~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~~ 89 (248)
T 2c0g_A 15 CTGCVDLDELSFEKTV-ERFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDRY 89 (248)
T ss_dssp CTTCEECCTTTHHHHH-TTSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHHT
T ss_pred CCCcEECCHHHHHHHH-hcCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHHh
Confidence 4468899999999965 67789999999 99998 89999999999964 3479999999998 5 56 489
Q ss_pred CCc--CCCeEEEEeCCCccCceEe--cCCCCHHHHHHHHHHHhccc
Q 023747 217 QVE--EYPTLLFYPAGDKANPIKV--SARSSSKNIAAFIKEQLKEK 258 (278)
Q Consensus 217 ~i~--~~Ptl~~f~~g~~~~~~~~--~g~~~~~~l~~~i~~~~~~~ 258 (278)
+|. ++||+++|+ |+...+..| .|.++.+.|.+||+++++..
T Consensus 90 ~V~~~~~PTl~~F~-G~~~~~~~y~~~G~~~~~~L~~fi~~~~~~~ 134 (248)
T 2c0g_A 90 KVDDKNFPSIFLFK-GNADEYVQLPSHVDVTLDNLKAFVSANTPLY 134 (248)
T ss_dssp TCCTTSCCEEEEES-SSSSSEEECCTTSCCCHHHHHHHHHHHSSCC
T ss_pred CCCcCCCCeEEEEe-CCcCcceeecccCCCCHHHHHHHHHHhhccc
Confidence 999 999999999 873225688 99999999999999998744
No 99
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.65 E-value=7.1e-16 Score=113.64 Aligned_cols=104 Identities=24% Similarity=0.438 Sum_probs=88.8
Q ss_pred CCeEEE-cccchHHHhhc---CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcCC
Q 023747 148 ANVQIV-VGKTFDDLVLN---SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEY 221 (278)
Q Consensus 148 ~~v~~l-~~~~~~~~i~~---~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~~ 221 (278)
+.+..+ +.++|++.+.. .+++++|.||++||++|+.+.|.+++++..+. ++.|+.+|++.+ ++ .+|++.++
T Consensus 6 ~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~---~~~~~~v~~~~~~~~~~~~~v~~~ 82 (118)
T 2vm1_A 6 GAVIACHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP---GAIFLKVDVDELKDVAEAYNVEAM 82 (118)
T ss_dssp CCEEECCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTSHHHHHHTTCCSB
T ss_pred CceEEecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC---CcEEEEEEcccCHHHHHHcCCCcC
Confidence 346667 56899988865 47899999999999999999999999999986 599999999988 55 58999999
Q ss_pred CeEEEEeCCCccCceEecCCCCHHHHHHHHHHHhcc
Q 023747 222 PTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKE 257 (278)
Q Consensus 222 Ptl~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~~~ 257 (278)
|++++|++|+.+. .+.| .+.+.|.++|.+.++.
T Consensus 83 Pt~~~~~~g~~~~--~~~g-~~~~~l~~~l~~~~~~ 115 (118)
T 2vm1_A 83 PTFLFIKDGEKVD--SVVG-GRKDDIHTKIVALMGS 115 (118)
T ss_dssp SEEEEEETTEEEE--EEES-CCHHHHHHHHHHHHC-
T ss_pred cEEEEEeCCeEEE--EecC-CCHHHHHHHHHHHhcc
Confidence 9999999887653 6777 5899999999998864
No 100
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.65 E-value=1e-15 Score=116.44 Aligned_cols=106 Identities=18% Similarity=0.358 Sum_probs=90.3
Q ss_pred CCCeEEEc-ccchHHHhh---cCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcC
Q 023747 147 NANVQIVV-GKTFDDLVL---NSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEE 220 (278)
Q Consensus 147 ~~~v~~l~-~~~~~~~i~---~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~ 220 (278)
...+..++ .++|.+.+. ..+++++|.||++||++|+.+.|.+++++..+. ++.|+.||++.+ ++ .+|++.+
T Consensus 23 ~~~~~~i~~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~---~v~~~~v~~~~~~~~~~~~~v~~ 99 (139)
T 3d22_A 23 GGNVHLITTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYP---SLMFLVIDVDELSDFSASWEIKA 99 (139)
T ss_dssp CTTCEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTSHHHHHHTTCCE
T ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC---CCEEEEEeCcccHHHHHHcCCCc
Confidence 44566665 699998875 348899999999999999999999999999985 599999999988 56 5899999
Q ss_pred CCeEEEEeCCCccCceEecCCCCHHHHHHHHHHHhccc
Q 023747 221 YPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKEK 258 (278)
Q Consensus 221 ~Ptl~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~~~~ 258 (278)
+|++++|++|+.+. ++.|. +.+.|.++|.+.++..
T Consensus 100 ~Pt~~~~~~G~~~~--~~~G~-~~~~l~~~l~~~~~~~ 134 (139)
T 3d22_A 100 TPTFFFLRDGQQVD--KLVGA-NKPELHKKITAILDSL 134 (139)
T ss_dssp ESEEEEEETTEEEE--EEESC-CHHHHHHHHHHHHHTS
T ss_pred ccEEEEEcCCeEEE--EEeCC-CHHHHHHHHHHHhccC
Confidence 99999998887653 67787 8899999999988754
No 101
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.64 E-value=1.5e-15 Score=119.75 Aligned_cols=116 Identities=10% Similarity=0.161 Sum_probs=93.0
Q ss_pred HHHhccCCcccccccCCCCceeeeeeeecCCceEEEEEe-------Cc-cchHHHHHHHHHHHHHhc-----CceEEEEE
Q 023747 8 QATLRLPKSCTLISNLPTTSLELLKVSQIDTLDMVYVFA-------KA-DDLKSLLEPLEDIARNFK-----GKIMFTAV 74 (278)
Q Consensus 8 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~F~~-------~~-~~c~~~~~~~~~la~~~~-----~~v~f~~v 74 (278)
++.+..+. .+|.++.+||+.++. ...+.+++|.|++ .| ++|+.+.|.|+++|+++. +++.|++|
T Consensus 11 l~~l~~~~--~vi~lt~~nF~~~v~-~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kv 87 (178)
T 3ga4_A 11 ILQLKDDT--GVITVTADNYPLLSR-GVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTV 87 (178)
T ss_dssp HHTTCCTT--SEEECCTTTHHHHTT-CCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEE
T ss_pred HHHhhccC--CCEECCHHHHHHHHc-ccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEE
Confidence 44444433 478899999987653 2345679999999 49 999999999999999998 88999999
Q ss_pred eCCCcccchhHHHHcCCCCCCceEEEEecCCccee-----------ecC--C-C-CCChHHHHHHHHHHhcC
Q 023747 75 DIADEDLAKPFLTLFGLEESKNTVVTAFDNKAISK-----------FLL--E-S-DLTPSNIEEFCSRLLHG 131 (278)
Q Consensus 75 d~~~~~~~~~l~~~~~i~~~~Ptl~~~~~~~~~~~-----------~~~--~-g-~~~~~~i~~fi~~~~~~ 131 (278)
|++++ ++++++|||.+. ||| ++|.+|.... +.| . | .++.+.|.+|+.+.++.
T Consensus 88 D~d~~---~~la~~~~I~si-Ptl-~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~~t~~ 154 (178)
T 3ga4_A 88 DVNEV---PQLVKDLKLQNV-PHL-VVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAKILNI 154 (178)
T ss_dssp ETTTC---HHHHHHTTCCSS-CEE-EEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHHHHTC
T ss_pred ECccC---HHHHHHcCCCCC-CEE-EEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHHhcCC
Confidence 99999 999999999999 999 6665554333 333 3 4 79999999999998753
No 102
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.63 E-value=1.3e-16 Score=121.13 Aligned_cols=104 Identities=23% Similarity=0.320 Sum_probs=87.6
Q ss_pred CCCeEEEcccchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeC---------CCC-CC-CC
Q 023747 147 NANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDA---------SAN-EH-PK 215 (278)
Q Consensus 147 ~~~v~~l~~~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~---------~~~-~~-~~ 215 (278)
.+.+..++.++|++.+.. +++|.||++||++|+.+.|.+.++++.+. +.|+.||+ +.+ ++ .+
T Consensus 15 ~~~v~~l~~~~~~~~~~~---~vlv~F~a~wC~~C~~~~p~l~~l~~~~~----v~~~~vd~~~~~~~~~~d~~~~l~~~ 87 (135)
T 3emx_A 15 DGRLIYITPEEFRQLLQG---DAILAVYSKTCPHCHRDWPQLIQASKEVD----VPIVMFIWGSLIGERELSAARLEMNK 87 (135)
T ss_dssp TTEEEECCHHHHHHHHTS---SEEEEEEETTCHHHHHHHHHHHHHHTTCC----SCEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred cCceeecCHHHHHHHhCC---cEEEEEECCcCHhhhHhChhHHHHHHHCC----CEEEEEECCCchhhhhhhhhHHHHHH
Confidence 456888999999998844 99999999999999999999999998884 78999998 444 44 47
Q ss_pred CCCcCCCeEEEEeCCCccCceEecCCCCHHHHHHHHHHHhcccC
Q 023747 216 LQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKEKD 259 (278)
Q Consensus 216 ~~i~~~Ptl~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~~~~~ 259 (278)
|+|.++||+++|++|+.+. ++.|..+.+.+.++++++++...
T Consensus 88 ~~v~~~Pt~~~~~~G~~v~--~~~G~~~~~~~~~~i~~~~~~~~ 129 (135)
T 3emx_A 88 AGVEGTPTLVFYKEGRIVD--KLVGATPWSLKVEKAREIYGGEG 129 (135)
T ss_dssp HTCCSSSEEEEEETTEEEE--EEESCCCHHHHHHHHHHHC----
T ss_pred cCCceeCeEEEEcCCEEEE--EEeCCCCHHHHHHHHHHHhCCCc
Confidence 8999999999999887654 78999999999999999987643
No 103
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=99.44 E-value=1.8e-17 Score=119.60 Aligned_cols=102 Identities=27% Similarity=0.595 Sum_probs=89.8
Q ss_pred eEEEcccchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcCCCeEEEE
Q 023747 150 VQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTLLFY 227 (278)
Q Consensus 150 v~~l~~~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~~Ptl~~f 227 (278)
+..++.++|.+.+...+++++|.||++||++|+.+.+.+.+++..+.+ ++.++.+|++.+ ++ .+|++.++|++++|
T Consensus 3 v~~l~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 80 (106)
T 2yj7_A 3 VIEVTDENFEQEVLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEG--KVKVVKVNVDENPNTAAQYGIRSIPTLLLF 80 (106)
Confidence 667889999988777789999999999999999999999999999986 699999999988 55 58999999999999
Q ss_pred eCCCccCceEecCCCCHHHHHHHHHHHh
Q 023747 228 PAGDKANPIKVSARSSSKNIAAFIKEQL 255 (278)
Q Consensus 228 ~~g~~~~~~~~~g~~~~~~l~~~i~~~~ 255 (278)
++|+... .+.|..+.+.+.+||++.+
T Consensus 81 ~~g~~~~--~~~g~~~~~~l~~~l~~~l 106 (106)
T 2yj7_A 81 KNGQVVD--RLVGAQPKEALKERIDKHL 106 (106)
Confidence 8877654 7889999999999997653
No 104
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.63 E-value=1.4e-16 Score=121.86 Aligned_cols=105 Identities=15% Similarity=0.218 Sum_probs=76.8
Q ss_pred CeEEEcccchHHHhhcCCCcEEEEEECCC--ChhHHHHHHHHHHHHHHhcCCCceE--EEEEeCCCC-CC-CCCCCcCCC
Q 023747 149 NVQIVVGKTFDDLVLNSHKDVLLEVYTPW--CVTCETTSKQIEKLAKHFKGLDNLV--IAKIDASAN-EH-PKLQVEEYP 222 (278)
Q Consensus 149 ~v~~l~~~~~~~~i~~~~~~~~v~f~~~~--c~~c~~~~~~~~~~a~~~~~~~~~~--~~~vd~~~~-~~-~~~~i~~~P 222 (278)
.+..++.++|++++. .++.++|+|+++| |++|+.+.|.|+++++.+ + ++. |+.||++.+ ++ .+|+|.++|
T Consensus 18 ~~~~l~~~~f~~~i~-~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~--~v~~~~~~Vd~d~~~~la~~~~V~~iP 93 (142)
T 2es7_A 18 GWQPVEASTVDDWIK-RVGDGVILLSSDPRRTPEVSDNPVMIAELLREF-P--QFDWQVAVADLEQSEAIGDRFNVRRFP 93 (142)
T ss_dssp TCEECCCC---------CCSEEEEECCCSCC----CCHHHHHHHHHHTC-T--TSCCEEEEECHHHHHHHHHTTTCCSSS
T ss_pred cCcccccccHHHHHH-hCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-c--ccceeEEEEECCCCHHHHHhcCCCcCC
Confidence 478899999999885 4456888999877 999999999999999999 5 688 999999988 66 589999999
Q ss_pred eEEEEeCCCccCceEecCCCCHHHHHHHHHHHhcccC
Q 023747 223 TLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKEKD 259 (278)
Q Consensus 223 tl~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~~~~~ 259 (278)
|+++|++|+.+. ++.|..+.+.|.+||++.++...
T Consensus 94 T~~~fk~G~~v~--~~~G~~~~~~l~~~i~~~l~~~~ 128 (142)
T 2es7_A 94 ATLVFTDGKLRG--ALSGIHPWAELLTLMRSIVDTPA 128 (142)
T ss_dssp EEEEESCC------CEESCCCHHHHHHHHHHHHC---
T ss_pred eEEEEeCCEEEE--EEeCCCCHHHHHHHHHHHhcccc
Confidence 999999888765 78999999999999999987543
No 105
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.63 E-value=7.7e-16 Score=114.01 Aligned_cols=104 Identities=15% Similarity=0.294 Sum_probs=85.0
Q ss_pred CeEEE--cccchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcCCCeE
Q 023747 149 NVQIV--VGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTL 224 (278)
Q Consensus 149 ~v~~l--~~~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~~Ptl 224 (278)
.+..+ +..+|.+.+.+.+++++|.||++||++|+.+.|.+.+++..+ . ++.|+.+|++.+ ++ .+|++.++|++
T Consensus 4 ~v~~~~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~--~v~~~~vd~~~~~~~~~~~~i~~~Pt~ 80 (118)
T 2f51_A 4 PIVHFNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEAN-K--DVTFIKVDVDKNGNAADAYGVSSIPAL 80 (118)
T ss_dssp CSEEECSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC-T--TSEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred cceEecCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC-C--CeEEEEEECCCCHHHHHhcCCCCCCEE
Confidence 36667 568888777677899999999999999999999999999998 3 699999999988 56 58999999999
Q ss_pred EEEeC----CCccCceEecCCCCHHHHHHHHHHHhccc
Q 023747 225 LFYPA----GDKANPIKVSARSSSKNIAAFIKEQLKEK 258 (278)
Q Consensus 225 ~~f~~----g~~~~~~~~~g~~~~~~l~~~i~~~~~~~ 258 (278)
++|++ |+.+. ++.|..+ ++|.+.+.++..+.
T Consensus 81 ~~~~~~~~~G~~~~--~~~G~~~-~~l~~~~~~~~~~~ 115 (118)
T 2f51_A 81 FFVKKEGNEIKTLD--QFVGADV-SRIKADIEKFKHHH 115 (118)
T ss_dssp EEEEEETTEEEEEE--EEESCCH-HHHHHHHHHHC---
T ss_pred EEEeCCCCcceEEE--eecCCCH-HHHHHHHHHhhhcc
Confidence 99987 65443 6777654 56999998887653
No 106
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=99.61 E-value=3.5e-15 Score=123.75 Aligned_cols=102 Identities=24% Similarity=0.400 Sum_probs=88.7
Q ss_pred CCeEEEcccchHHHhhcCCCcEEEEEEC--CCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCC-----C-CC-CCCCC
Q 023747 148 ANVQIVVGKTFDDLVLNSHKDVLLEVYT--PWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA-----N-EH-PKLQV 218 (278)
Q Consensus 148 ~~v~~l~~~~~~~~i~~~~~~~~v~f~~--~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~-----~-~~-~~~~i 218 (278)
..|..++..+|++.+ ..+++++|.||+ |||+ +.|.|++++..+.+.+++.|+.||++. + ++ .+|+|
T Consensus 5 ~~v~~Lt~~nF~~~i-~~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~~V 79 (240)
T 2qc7_A 5 KGALPLDTVTFYKVI-PKSKFVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYKL 79 (240)
T ss_dssp TTCEECCTTHHHHHG-GGCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHTTC
T ss_pred CCceECCHHHHHHHH-cCCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHcCC
Confidence 358899999999976 567899999999 9998 899999999999764479999999654 5 55 48999
Q ss_pred c--CCCeEEEEeCCC-ccCceEecCCCCHHHHHHHHHHHh
Q 023747 219 E--EYPTLLFYPAGD-KANPIKVSARSSSKNIAAFIKEQL 255 (278)
Q Consensus 219 ~--~~Ptl~~f~~g~-~~~~~~~~g~~~~~~l~~~i~~~~ 255 (278)
. ++||+++|++|+ .. +..|.|.++.+.|.+||++++
T Consensus 80 ~~~~~PTl~~f~~G~~~~-~~~y~G~~~~~~L~~fi~~~~ 118 (240)
T 2qc7_A 80 DKESYPVFYLFRDGDFEN-PVPYTGAVKVGAIQRWLKGQG 118 (240)
T ss_dssp CGGGCSEEEEEETTCSSC-CEECCSCSCHHHHHHHHHHTT
T ss_pred CCCCCCEEEEEeCCCcCc-ceeecCCCCHHHHHHHHHHhc
Confidence 9 999999999987 33 558999999999999999985
No 107
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.61 E-value=1.2e-15 Score=115.37 Aligned_cols=107 Identities=11% Similarity=0.269 Sum_probs=87.0
Q ss_pred CCCCeEEEcc-cchHHHhhcC-CCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcCC
Q 023747 146 TNANVQIVVG-KTFDDLVLNS-HKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEY 221 (278)
Q Consensus 146 ~~~~v~~l~~-~~~~~~i~~~-~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~~ 221 (278)
....+..++. ++|.+.+... +++++|.||++||++|+.+.|.+++++..+ ++.|+.+|++.+ ++ .+|+|.++
T Consensus 18 ~~~~v~~l~~~~~~~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~----~v~~~~vd~~~~~~l~~~~~v~~~ 93 (133)
T 3cxg_A 18 GQSIYIELKNTGSLNQVFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY----YVTLVDIDVDIHPKLNDQHNIKAL 93 (133)
T ss_dssp TTEEEEECCCTTHHHHHHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE----ECEEEEEETTTCHHHHHHTTCCSS
T ss_pred CCccEEEecChhHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc----CEEEEEEeccchHHHHHhcCCCCC
Confidence 3456788875 8888877554 579999999999999999999999988877 489999999988 56 58999999
Q ss_pred CeEEEEe--CCCccCceEecCCCCHHHHHHHHHHHhcc
Q 023747 222 PTLLFYP--AGDKANPIKVSARSSSKNIAAFIKEQLKE 257 (278)
Q Consensus 222 Ptl~~f~--~g~~~~~~~~~g~~~~~~l~~~i~~~~~~ 257 (278)
|++++|+ +|+.....++.|. +.+.|.++|.+.+..
T Consensus 94 Pt~~~~~~~~g~g~~~~~~~G~-~~~~l~~~l~~~l~~ 130 (133)
T 3cxg_A 94 PTFEFYFNLNNEWVLVHTVEGA-NQNDIEKAFQKYCLE 130 (133)
T ss_dssp SEEEEEEEETTEEEEEEEEESC-CHHHHHHHHHHHSEE
T ss_pred CEEEEEEecCCCeEEEEEEcCC-CHHHHHHHHHHHHHh
Confidence 9999996 7762112267787 899999999998764
No 108
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.60 E-value=3.2e-16 Score=115.87 Aligned_cols=97 Identities=8% Similarity=0.216 Sum_probs=79.7
Q ss_pred CeEEEcccchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-------CC-CCCCCcC
Q 023747 149 NVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-------EH-PKLQVEE 220 (278)
Q Consensus 149 ~v~~l~~~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-------~~-~~~~i~~ 220 (278)
.+..++.++|.+.+ ..+++++|+||++||++|+.+.|.+.+++..+.. .+.++ |++.. ++ .+|+|.+
T Consensus 13 ~~~~~~~~~~~~~~-~~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~--~v~~~--~~~~~~~~~~~~~~~~~~~i~~ 87 (118)
T 1zma_A 13 DLEVTTVVRAQEAL-DKKETATFFIGRKTCPYCRKFAGTLSGVVAETKA--HIYFI--NSEEPSQLNDLQAFRSRYGIPT 87 (118)
T ss_dssp TSEECCHHHHHHHH-HTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCC--CCEEE--ETTCGGGHHHHHHHHHHHTCCS
T ss_pred hhhcCCHHHHHHHH-hCCCeEEEEEECCCCccHHHHHHHHHHHHHhcCC--eEEEE--ECCCcCcHHHHHHHHHHcCCCC
Confidence 47788999999987 4578999999999999999999999999998864 45554 44432 22 3679999
Q ss_pred CCeEEEEeCCCccCceEecCCCCHHHHHHHHH
Q 023747 221 YPTLLFYPAGDKANPIKVSARSSSKNIAAFIK 252 (278)
Q Consensus 221 ~Ptl~~f~~g~~~~~~~~~g~~~~~~l~~~i~ 252 (278)
+||+++|++|+.+. ++.|..+.+.|.+||+
T Consensus 88 ~Pt~~~~~~G~~~~--~~~G~~~~~~l~~~l~ 117 (118)
T 1zma_A 88 VPGFVHITDGQINV--RCDSSMSAQEIKDFAG 117 (118)
T ss_dssp SCEEEEEETTEEEE--ECCTTCCHHHHHHHHT
T ss_pred CCeEEEEECCEEEE--EecCCCCHHHHHHHhh
Confidence 99999999887653 7899999999999985
No 109
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.60 E-value=6.4e-14 Score=123.80 Aligned_cols=193 Identities=10% Similarity=0.112 Sum_probs=152.1
Q ss_pred cCCceEEEEEeCccchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCceEEEEecCCcceeecCCCC
Q 023747 36 IDTLDMVYVFAKADDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFDNKAISKFLLESD 115 (278)
Q Consensus 36 ~~~~~~v~F~~~~~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Ptl~~~~~~~~~~~~~~~g~ 115 (278)
...+++|.||.++ |....+.|.++|..+++.+.|+.++ . ..++++|+|++ |+| .+|.........|.|.
T Consensus 143 ~~~~~vv~ff~~~--~~~~~~~f~~~A~~~~~~~~F~~~~---~---~~~~~~~~v~~--p~i-~lf~~~~~~~~~y~g~ 211 (367)
T 3us3_A 143 EDEIKLIGYFKNK--DSEHYKAFKEAAEEFHPYIPFFATF---D---SKVAKKLTLKL--NEI-DFYEAFMEEPVTIPDK 211 (367)
T ss_dssp CSSCEEEEECSCT--TCHHHHHHHHHHHHHTTTSCEEEEC---C---HHHHHHHTCCT--TCE-EEECTTCSSCEECSSS
T ss_pred CCCcEEEEEECCC--CchHHHHHHHHHHhhcCCcEEEEEC---C---HHHHHHcCCCC--CeE-EEEcCCCCCCeecCCC
Confidence 4578999999987 6678899999999999989999874 3 57999999984 999 6666543445667885
Q ss_pred -CChHHHHHHHHHHhcCcccccccCCCCCCCCCCCeEEEcccchHHHhhcC-CCcEEEEEECCCChhHHHHHHHHHHHHH
Q 023747 116 -LTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIVVGKTFDDLVLNS-HKDVLLEVYTPWCVTCETTSKQIEKLAK 193 (278)
Q Consensus 116 -~~~~~i~~fi~~~~~~~~~~~~~s~~~p~~~~~~v~~l~~~~~~~~i~~~-~~~~~v~f~~~~c~~c~~~~~~~~~~a~ 193 (278)
++.++|.+|+.... ...|..++.+++.+..... .+..++.|+.++|..|..+.+.++.+|+
T Consensus 212 ~~~~~~l~~fi~~~~-----------------~p~v~elt~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~l~~vA~ 274 (367)
T 3us3_A 212 PNSEEEIVNFVEEHR-----------------RSTLRKLKPESMYETWEDDMDGIHIVAFAEEADPDGYEFLEILKSVAQ 274 (367)
T ss_dssp SCCHHHHHHHHHHTC-----------------SCSEEECCGGGHHHHHHSCBTTEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcC-----------------ccceeecChhhHHHHHhhccCCcEEEEEEcCCChhHHHHHHHHHHHHH
Confidence 99999999998853 2248999999998876543 4467788999999999999999999999
Q ss_pred HhcCCCceEEEEEeCCCCCC-C-----CCCCc-CCCeEEEEeCCCc-cCceEecC---CCCHHHHHHHHHHHhc
Q 023747 194 HFKGLDNLVIAKIDASANEH-P-----KLQVE-EYPTLLFYPAGDK-ANPIKVSA---RSSSKNIAAFIKEQLK 256 (278)
Q Consensus 194 ~~~~~~~~~~~~vd~~~~~~-~-----~~~i~-~~Ptl~~f~~g~~-~~~~~~~g---~~~~~~l~~~i~~~~~ 256 (278)
.+++.+++.|+.+|++.... . .+++. .+|+++++...+. ...+.+.+ ..+.++|.+|+.+.+.
T Consensus 275 ~~~~~~ki~F~~id~~~~~~~l~~~~~~fgl~~~~P~~~i~~~~~~~~~~y~~~~~~~~~t~~~i~~F~~~~~~ 348 (367)
T 3us3_A 275 DNTDNPDLSIIWIDPDDFPLLVPYWEKTFDIDLSAPQIGVVNVTDADSVWMEMDDEEDLPSAEELEDWLEDVLE 348 (367)
T ss_dssp HTTTCTTCCEEEECGGGCTTTHHHHHHHHTCCTTSCEEEEEETTTCCEEECCCCTTSCCCCHHHHHHHHHHHHH
T ss_pred HcCCCCceEEEEECCccchhHHHHHHHhcCCCCCCCeEEEEecccccceeecCCcccccCCHHHHHHHHHHHHc
Confidence 99975459999999988742 1 25666 7999999975443 11223443 6899999999998875
No 110
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.59 E-value=8.9e-15 Score=106.00 Aligned_cols=85 Identities=14% Similarity=0.136 Sum_probs=72.3
Q ss_pred cCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCceEEEEecCCcceeecCCC
Q 023747 36 IDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFDNKAISKFLLES 114 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Ptl~~~~~~~~~~~~~~~g 114 (278)
.+++++|.||++| ++|+.+.|.|+++++.+.+ +.|+.||++++ ++++++|||.++ ||+ .++.+|.. ...+.|
T Consensus 19 ~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~vd~d~~---~~l~~~~~V~~~-PT~-~~~~~G~~-v~~~~G 91 (105)
T 3zzx_A 19 GNKLVVIDFYATWCGPCKMIAPKLEELSQSMSD-VVFLKVDVDEC---EDIAQDNQIACM-PTF-LFMKNGQK-LDSLSG 91 (105)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-EEEEEEETTTC---HHHHHHTTCCBS-SEE-EEEETTEE-EEEEES
T ss_pred CCCEEEEEEECCCCCCccCCCcchhhhhhccCC-eEEEEEecccC---HHHHHHcCCCee-cEE-EEEECCEE-EEEEeC
Confidence 3578999999999 9999999999999999976 89999999999 999999999999 999 55554432 333456
Q ss_pred CCChHHHHHHHHHH
Q 023747 115 DLTPSNIEEFCSRL 128 (278)
Q Consensus 115 ~~~~~~i~~fi~~~ 128 (278)
.+.++|.+|+++.
T Consensus 92 -~~~~~l~~~i~k~ 104 (105)
T 3zzx_A 92 -ANYDKLLELVEKN 104 (105)
T ss_dssp -CCHHHHHHHHHHH
T ss_pred -cCHHHHHHHHHhc
Confidence 6899999999874
No 111
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.57 E-value=1.1e-14 Score=109.27 Aligned_cols=106 Identities=17% Similarity=0.136 Sum_probs=89.7
Q ss_pred cccccCCCCceeeeeeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCc
Q 023747 18 TLISNLPTTSLELLKVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKN 96 (278)
Q Consensus 18 ~~v~~~~~~~~~~~~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~P 96 (278)
.++.++.+++...+. +.+++++|.||++| ++|+.+.|.|.++++.+++.+.|+.||++.+ ..++++|+|.++ |
T Consensus 18 ~v~~l~~~~f~~~~~--~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~---~~l~~~~~v~~~-P 91 (130)
T 2dml_A 18 DVIELTPSNFNREVI--QSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVNADKH---QSLGGQYGVQGF-P 91 (130)
T ss_dssp SSEECCTTTHHHHTT--TCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTTSEEEEEETTTC---HHHHHHHTCCSS-S
T ss_pred CcEECCHHHHHHHHh--cCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCceEEEEEeCCCC---HHHHHHcCCCcc-C
Confidence 456677766655332 45779999999999 9999999999999999998899999999998 899999999999 9
Q ss_pred eEEEEecCCcceeecCCCCCChHHHHHHHHHHhc
Q 023747 97 TVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLH 130 (278)
Q Consensus 97 tl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 130 (278)
|+ .+++.+......+.|..+.+++.+|+.+.+.
T Consensus 92 t~-~~~~~~~~~~~~~~G~~~~~~l~~~l~~~l~ 124 (130)
T 2dml_A 92 TI-KIFGANKNKPEDYQGGRTGEAIVDAALSALR 124 (130)
T ss_dssp EE-EEESSCTTSCEECCSCCSHHHHHHHHHHHHH
T ss_pred EE-EEEeCCCCeEEEeecCCCHHHHHHHHHHHHh
Confidence 99 6776554435567899999999999998764
No 112
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.57 E-value=4.1e-15 Score=111.63 Aligned_cols=107 Identities=22% Similarity=0.419 Sum_probs=86.9
Q ss_pred EEEcccchHHHhh---cCCCcEEEEEECCCChhHHHHHHHH---HHHHHHhcCCCceEEEEEeCCC--C-CC-CCCCCcC
Q 023747 151 QIVVGKTFDDLVL---NSHKDVLLEVYTPWCVTCETTSKQI---EKLAKHFKGLDNLVIAKIDASA--N-EH-PKLQVEE 220 (278)
Q Consensus 151 ~~l~~~~~~~~i~---~~~~~~~v~f~~~~c~~c~~~~~~~---~~~a~~~~~~~~~~~~~vd~~~--~-~~-~~~~i~~ 220 (278)
..++..+|.+.+. ..+++++|.||++||++|+.+.+.+ ..++..+.. ++.++.+|++. + ++ .+|++.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~~~v~~ 86 (130)
T 2kuc_A 9 IAFRELSFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNR--HFVNLKMDMEKGEGVELRKKYGVHA 86 (130)
T ss_dssp CCCBCCCHHHHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHH--HSEEEEECSSSTTHHHHHHHTTCCS
T ss_pred CCcccCCHHHHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhc--CeEEEEEecCCcchHHHHHHcCCCC
Confidence 3457788888774 3578999999999999999999999 777777765 68999999985 2 44 4899999
Q ss_pred CCeEEEE-eCCCccCceEecCCCCHHHHHHHHHHHhcccCCC
Q 023747 221 YPTLLFY-PAGDKANPIKVSARSSSKNIAAFIKEQLKEKDQS 261 (278)
Q Consensus 221 ~Ptl~~f-~~g~~~~~~~~~g~~~~~~l~~~i~~~~~~~~~~ 261 (278)
+|++++| ++|+.+. ++.|..+.+.|.+||++.+++....
T Consensus 87 ~Pt~~~~d~~G~~~~--~~~G~~~~~~l~~~l~~~~~~~~~~ 126 (130)
T 2kuc_A 87 YPTLLFINSSGEVVY--RLVGAEDAPELLKKVKLGVESEGHH 126 (130)
T ss_dssp SCEEEEECTTSCEEE--EEESCCCHHHHHHHHHHHHSCCC--
T ss_pred CCEEEEECCCCcEEE--EecCCCCHHHHHHHHHHHHHhcccc
Confidence 9999999 5666543 7889999999999999999876543
No 113
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.57 E-value=1.7e-14 Score=132.61 Aligned_cols=114 Identities=18% Similarity=0.316 Sum_probs=96.8
Q ss_pred CCCCeEEEcccchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCC-CceEEEEEeCCC--C-CC-CCCCCcC
Q 023747 146 TNANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGL-DNLVIAKIDASA--N-EH-PKLQVEE 220 (278)
Q Consensus 146 ~~~~v~~l~~~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~-~~~~~~~vd~~~--~-~~-~~~~i~~ 220 (278)
....|..++.++|++.+.+.+++++|.|||+||++|+.+.|.|+++++.+.+. ..+.|+.|||+. + ++ .+|+|.+
T Consensus 10 ~~~~V~~Lt~~~f~~~v~~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~~V~~ 89 (519)
T 3t58_A 10 SSDPLTLLDADSVRPTVLGSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREFNIAG 89 (519)
T ss_dssp TTSSSEEECTTTHHHHHSSCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHTTCCS
T ss_pred CCCCcEECChHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHHcCCcc
Confidence 45579999999999999888899999999999999999999999999999862 269999999975 3 45 4899999
Q ss_pred CCeEEEEeCCCccC--ceEecCCCCHHHHHHHHHHHhcccC
Q 023747 221 YPTLLFYPAGDKAN--PIKVSARSSSKNIAAFIKEQLKEKD 259 (278)
Q Consensus 221 ~Ptl~~f~~g~~~~--~~~~~g~~~~~~l~~~i~~~~~~~~ 259 (278)
+||+++|++|++.+ ...+.|..+.+.|.++|.+.++...
T Consensus 90 ~PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l~~~~ 130 (519)
T 3t58_A 90 FPTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDALESHR 130 (519)
T ss_dssp BSEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHHTTCC
T ss_pred cCEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHHhhcc
Confidence 99999998754421 2357788999999999999997544
No 114
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.56 E-value=1.8e-14 Score=103.82 Aligned_cols=101 Identities=14% Similarity=0.177 Sum_probs=86.5
Q ss_pred cccccCCCCceeeeeeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCc
Q 023747 18 TLISNLPTTSLELLKVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKN 96 (278)
Q Consensus 18 ~~v~~~~~~~~~~~~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~P 96 (278)
+++.++..++...+ .+++++|+||++| ++|+.+.|.|+++++.+++++.|+.+|++.. +.++++|+|.++ |
T Consensus 4 ~v~~l~~~~~~~~~----~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~~~~~v~~~-P 75 (106)
T 3die_A 4 AIVKVTDADFDSKV----ESGVQLVDFWATACGPCKMIAPVLEELAADYEGKADILKLDVDEN---PSTAAKYEVMSI-P 75 (106)
T ss_dssp CCEECCTTTHHHHS----CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTC---HHHHHHTTCCSB-S
T ss_pred ceEECCHHHHHHHh----cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCCcEEEEEECCcC---HHHHHhCCCccc-C
Confidence 45667777776655 6789999999999 9999999999999999999999999999999 899999999999 9
Q ss_pred eEEEEecCCcceeecCCCCCChHHHHHHHHHH
Q 023747 97 TVVTAFDNKAISKFLLESDLTPSNIEEFCSRL 128 (278)
Q Consensus 97 tl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~ 128 (278)
|+ .+++.|. ....+.|..+.+++.+++++.
T Consensus 76 t~-~~~~~G~-~~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 3die_A 76 TL-IVFKDGQ-PVDKVVGFQPKENLAEVLDKH 105 (106)
T ss_dssp EE-EEEETTE-EEEEEESCCCHHHHHHHHHTT
T ss_pred EE-EEEeCCe-EEEEEeCCCCHHHHHHHHHHh
Confidence 99 6665443 344568899999999999864
No 115
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=99.56 E-value=1.9e-14 Score=119.70 Aligned_cols=142 Identities=10% Similarity=0.045 Sum_probs=108.6
Q ss_pred ccccCCCCceeeeeeeecCCceEEEEE--eCccchHHHHHHHHHHHHHhc---CceEEEEEeCCC-----cccchhHHHH
Q 023747 19 LISNLPTTSLELLKVSQIDTLDMVYVF--AKADDLKSLLEPLEDIARNFK---GKIMFTAVDIAD-----EDLAKPFLTL 88 (278)
Q Consensus 19 ~v~~~~~~~~~~~~~~~~~~~~~v~F~--~~~~~c~~~~~~~~~la~~~~---~~v~f~~vd~~~-----~~~~~~l~~~ 88 (278)
++.+++.||..+ .+.+.+++|.|| ++| |. +.|.|+++|..+. +.+.|+.|||++ + +++|++
T Consensus 18 v~~Lt~~nF~~v---i~~~~~vlV~Fy~~ApW--Cg-l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n---~~la~~ 88 (248)
T 2c0g_A 18 CVDLDELSFEKT---VERFPYSVVKFDIASPY--GE-KHEAFTAFSKSAHKATKDLLIATVGVKDYGELEN---KALGDR 88 (248)
T ss_dssp CEECCTTTHHHH---HTTSSEEEEEEEESSCC--SH-HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTT---HHHHHH
T ss_pred cEECCHHHHHHH---HhcCCCEEEEEECCCCC--Cc-cHHHHHHHHHHHhccCCCeEEEEEECCccccccc---HHHHHH
Confidence 567888888763 356788999999 899 55 9999999999994 479999999998 5 899999
Q ss_pred cCCC--CCCceEEEEecCCc-ceeecC--CCCCChHHHHHHHHHHhcCcccccccCCCCCCCCCCCeEEEcccchHHHhh
Q 023747 89 FGLE--ESKNTVVTAFDNKA-ISKFLL--ESDLTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIVVGKTFDDLVL 163 (278)
Q Consensus 89 ~~i~--~~~Ptl~~~~~~~~-~~~~~~--~g~~~~~~i~~fi~~~~~~~~~~~~~s~~~p~~~~~~v~~l~~~~~~~~i~ 163 (278)
|+|. ++ ||| .+|. |. .....| .|.++.++|.+|+.+.+... . .. .+ .-..++.++.
T Consensus 89 ~~V~~~~~-PTl-~~F~-G~~~~~~~y~~~G~~~~~~L~~fi~~~~~~~-----~--~~----~g-----~i~~~d~l~~ 149 (248)
T 2c0g_A 89 YKVDDKNF-PSI-FLFK-GNADEYVQLPSHVDVTLDNLKAFVSANTPLY-----I--GR----DG-----CIKEFNEVLK 149 (248)
T ss_dssp TTCCTTSC-CEE-EEES-SSSSSEEECCTTSCCCHHHHHHHHHHHSSCC-----C--CC----TT-----CCHHHHHHHT
T ss_pred hCCCcCCC-CeE-EEEe-CCcCcceeecccCCCCHHHHHHHHHHhhccc-----c--CC----CC-----chHHHHHHHH
Confidence 9999 99 999 7776 54 234556 89999999999999975311 0 01 11 1245555542
Q ss_pred cCCCcEEEEEECCCChhHHHHHHHHHHHHHHhc
Q 023747 164 NSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFK 196 (278)
Q Consensus 164 ~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~ 196 (278)
.|.+.||..|..+....++++..+.
T Consensus 150 --------~f~~~~~~~~~~~~~~~~~~~~~l~ 174 (248)
T 2c0g_A 150 --------NYANIPDAEQLKLIEKLQAKQEQLT 174 (248)
T ss_dssp --------TGGGSCHHHHHHHHHHHHHHHHHCC
T ss_pred --------HHhcccchhHHHHHHHHHHHHHHcc
Confidence 2677889899888888888877763
No 116
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.55 E-value=1.3e-14 Score=110.57 Aligned_cols=107 Identities=18% Similarity=0.220 Sum_probs=88.4
Q ss_pred cccccCCCCceeeeeeee---------cCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHH
Q 023747 18 TLISNLPTTSLELLKVSQ---------IDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLT 87 (278)
Q Consensus 18 ~~v~~~~~~~~~~~~~~~---------~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~ 87 (278)
.++.++..+|...+...+ .+++++|.||++| ++|+.+.|.|.++++.+.+.+.|+.||++.. +.+++
T Consensus 23 ~v~~l~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~~ 99 (141)
T 3hxs_A 23 GTIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNVDKE---PELAR 99 (141)
T ss_dssp CCEECCHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEETTTC---HHHHH
T ss_pred CcccccHHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCceEEEEEECCCC---HHHHH
Confidence 356666666655444433 4789999999999 9999999999999999998899999999999 99999
Q ss_pred HcCCCCCCceEEEEecCCcceeecCCCCCChHHHHHHHHHHhc
Q 023747 88 LFGLEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLH 130 (278)
Q Consensus 88 ~~~i~~~~Ptl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 130 (278)
+|+|.++ ||+ .+++.++.. ..+.|..+.+.|.+|+++++.
T Consensus 100 ~~~v~~~-Pt~-~~~~~~g~~-~~~~G~~~~~~l~~~l~~~l~ 139 (141)
T 3hxs_A 100 DFGIQSI-PTI-WFVPMKGEP-QVNMGALSKEQLKGYIDKVLL 139 (141)
T ss_dssp HTTCCSS-SEE-EEECSSSCC-EEEESCCCHHHHHHHHHHTTC
T ss_pred HcCCCCc-CEE-EEEeCCCCE-EEEeCCCCHHHHHHHHHHHHc
Confidence 9999999 999 666433322 245889999999999998764
No 117
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.55 E-value=8.1e-16 Score=138.31 Aligned_cols=100 Identities=17% Similarity=0.245 Sum_probs=82.3
Q ss_pred CCCCeEEEcccchHHHhhcC-CCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCC------ceEEEEEeCCCC-CC-CCC
Q 023747 146 TNANVQIVVGKTFDDLVLNS-HKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLD------NLVIAKIDASAN-EH-PKL 216 (278)
Q Consensus 146 ~~~~v~~l~~~~~~~~i~~~-~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~------~~~~~~vd~~~~-~~-~~~ 216 (278)
....|..++.++|++.+... +++++|.|||+||++|+.+.|.|.++++.+.... ++.|+.||++.+ ++ .+|
T Consensus 21 ~~~~V~~Lt~~~F~~~l~~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~~la~~y 100 (470)
T 3qcp_A 21 LDSSVVDLSGDDFSRVHRVAPLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEVDLCRKY 100 (470)
T ss_dssp TCTTEEECSCSCGGGTCTTGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCHHHHHHT
T ss_pred CCCCcEECCHHHHHHHHHhCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCHHHHHHc
Confidence 35679999999999988643 5789999999999999999999999999997432 499999999998 66 589
Q ss_pred CCcCCCeEEEEeCCCccCceEecCCCCHH
Q 023747 217 QVEEYPTLLFYPAGDKANPIKVSARSSSK 245 (278)
Q Consensus 217 ~i~~~Ptl~~f~~g~~~~~~~~~g~~~~~ 245 (278)
+|.++||+++|++|+......|.|.++.+
T Consensus 101 ~V~~~PTlilf~~gg~~~~~~y~G~r~~e 129 (470)
T 3qcp_A 101 DINFVPRLFFFYPRDSCRSNEECGTSSLE 129 (470)
T ss_dssp TCCSSCEEEEEEESSCCCTTSCCCCCCEE
T ss_pred CCCccCeEEEEECCCceEEEEeeCCCCHH
Confidence 99999999999766543344677764444
No 118
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.55 E-value=2.6e-14 Score=103.48 Aligned_cols=103 Identities=18% Similarity=0.222 Sum_probs=85.9
Q ss_pred ccccCCCCceeeeeeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCce
Q 023747 19 LISNLPTTSLELLKVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNT 97 (278)
Q Consensus 19 ~v~~~~~~~~~~~~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Pt 97 (278)
++.++..++...+ .+.+++++|.||++| ++|+.+.|.+.++++.+++.+.|+.+|++.+ +.++++|+|.++ ||
T Consensus 4 v~~l~~~~f~~~~--~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~---~~~~~~~~v~~~-Pt 77 (108)
T 2trx_A 4 IIHLTDDSFDTDV--LKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQN---PGTAPKYGIRGI-PT 77 (108)
T ss_dssp EEECCTTTHHHHT--TTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTC---TTHHHHTTCCSS-SE
T ss_pred ceecchhhHHHHH--HhcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCCcEEEEEECCCC---HHHHHHcCCccc-CE
Confidence 5566666665433 356789999999999 9999999999999999998899999999998 899999999999 99
Q ss_pred EEEEecCCcceeecCCCCCChHHHHHHHHHHh
Q 023747 98 VVTAFDNKAISKFLLESDLTPSNIEEFCSRLL 129 (278)
Q Consensus 98 l~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 129 (278)
+ .++..|. ....+.|..+.+++.+|+++.+
T Consensus 78 ~-~~~~~G~-~~~~~~G~~~~~~l~~~l~~~l 107 (108)
T 2trx_A 78 L-LLFKNGE-VAATKVGALSKGQLKEFLDANL 107 (108)
T ss_dssp E-EEEETTE-EEEEEESCCCHHHHHHHHHHHH
T ss_pred E-EEEeCCE-EEEEEecCCCHHHHHHHHHHhh
Confidence 9 5555443 3445578899999999998865
No 119
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.55 E-value=1.2e-14 Score=109.31 Aligned_cols=102 Identities=12% Similarity=0.160 Sum_probs=85.0
Q ss_pred cccCCCCceeeeeeeecCCceEEEEEeCc---cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCc
Q 023747 20 ISNLPTTSLELLKVSQIDTLDMVYVFAKA---DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKN 96 (278)
Q Consensus 20 v~~~~~~~~~~~~~~~~~~~~~v~F~~~~---~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~P 96 (278)
..++.++|+..+ .+.+.+++|.||++| ++|+.+.|.+++++++|.+++.|++||.+++ ++++.+|||.+. |
T Consensus 18 ~~vt~~~F~~~v--~~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~v~~~KVdvDe~---~~la~~ygV~si-P 91 (137)
T 2qsi_A 18 TLVDEATVDDFI--AHSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPGRLVAAEVAAEAE---RGLMARFGVAVC-P 91 (137)
T ss_dssp EEECTTTHHHHH--HTSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTTEEEEEECGGGH---HHHHHHHTCCSS-S
T ss_pred cccCHhHHHHHH--hcCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccCCcEEEEEECCCC---HHHHHHcCCccC-C
Confidence 456677777665 334458999999966 7999999999999999999999999999999 999999999999 9
Q ss_pred eEEEEecCCcceeecCCCCCChHHHHHHHHHHh
Q 023747 97 TVVTAFDNKAISKFLLESDLTPSNIEEFCSRLL 129 (278)
Q Consensus 97 tl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 129 (278)
|+ .+|.+|.. .-...|..+.+.+.+++++++
T Consensus 92 Tl-ilFkdG~~-v~~~vG~~~k~~l~~~l~~~l 122 (137)
T 2qsi_A 92 SL-AVVQPERT-LGVIAKIQDWSSYLAQIGAML 122 (137)
T ss_dssp EE-EEEECCEE-EEEEESCCCHHHHHHHHHHHH
T ss_pred EE-EEEECCEE-EEEEeCCCCHHHHHHHHHHHh
Confidence 99 55554432 333478899999999999887
No 120
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.55 E-value=1.8e-14 Score=105.45 Aligned_cols=102 Identities=10% Similarity=0.119 Sum_probs=86.4
Q ss_pred ccccCCCCceeeeeeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCce
Q 023747 19 LISNLPTTSLELLKVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNT 97 (278)
Q Consensus 19 ~v~~~~~~~~~~~~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Pt 97 (278)
++.++..++...+ .+++++|.||++| ++|+.+.|.+.++++++++.+.|+.||++.+ +.++++|+|.++ ||
T Consensus 3 v~~l~~~~~~~~~----~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~vd~~~~---~~l~~~~~v~~~-Pt 74 (112)
T 2voc_A 3 IVKATDQSFSAET----SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDEN---QETAGKYGVMSI-PT 74 (112)
T ss_dssp CEECCTTTHHHHH----SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTTTCEEEEEETTTC---CSHHHHTTCCSB-SE
T ss_pred eEEecHHHHHHHh----CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCcEEEEEECCCC---HHHHHHcCCCcc-cE
Confidence 4566676766555 6788999999999 9999999999999999998899999999998 899999999999 99
Q ss_pred EEEEecCCcceeecCCCCCChHHHHHHHHHHhc
Q 023747 98 VVTAFDNKAISKFLLESDLTPSNIEEFCSRLLH 130 (278)
Q Consensus 98 l~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 130 (278)
+ .++..|. ....+.|..+.+++.+|+.+.+.
T Consensus 75 ~-~~~~~G~-~~~~~~G~~~~~~l~~~l~~~~~ 105 (112)
T 2voc_A 75 L-LVLKDGE-VVETSVGFKPKEALQELVNKHLL 105 (112)
T ss_dssp E-EEEETTE-EEEEEESCCCHHHHHHHHHTTSC
T ss_pred E-EEEeCCE-EEEEEeCCCCHHHHHHHHHHHHH
Confidence 9 5555443 34556899999999999998764
No 121
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.53 E-value=3.1e-14 Score=108.85 Aligned_cols=93 Identities=17% Similarity=0.200 Sum_probs=78.2
Q ss_pred ecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCceEEEEecCCcceee---
Q 023747 35 QIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFDNKAISKF--- 110 (278)
Q Consensus 35 ~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Ptl~~~~~~~~~~~~--- 110 (278)
..+++++|.||++| ++|+.+.|.++++|+++.+++.|++||.++. ++++++|+|.+. ||++++++++....-
T Consensus 39 ~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~v~f~kVDVDe~---~e~a~~y~V~si-PT~~fFk~G~~v~vd~Gt 114 (160)
T 2av4_A 39 EDERLVCIRFGHDYDPDCMKMDELLYKVADDIKNFCVIYLVDITEV---PDFNTMYELYDP-VSVMFFYRNKHMMIDLGT 114 (160)
T ss_dssp CSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTC---CTTTTTTTCCSS-EEEEEEETTEEEEEECSS
T ss_pred cCCCEEEEEEECCCChhHHHHHHHHHHHHHHccCCcEEEEEECCCC---HHHHHHcCCCCC-CEEEEEECCEEEEEecCC
Confidence 46789999999999 9999999999999999999999999999999 999999999999 999545554432101
Q ss_pred ----cCCCCCC-hHHHHHHHHHHhcC
Q 023747 111 ----LLESDLT-PSNIEEFCSRLLHG 131 (278)
Q Consensus 111 ----~~~g~~~-~~~i~~fi~~~~~~ 131 (278)
...|... .++|.++++.++.|
T Consensus 115 gd~~k~vGa~~~k~~l~~~ie~~~r~ 140 (160)
T 2av4_A 115 GNNNKINWPMNNKQEFIDIVETIFRG 140 (160)
T ss_dssp SCCSCBCSCCCCHHHHHHHHHHHHHH
T ss_pred CCcCeEEeecCCHHHHHHHHHHHHHH
Confidence 3567766 89999999988754
No 122
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.53 E-value=4.3e-14 Score=102.71 Aligned_cols=105 Identities=11% Similarity=0.163 Sum_probs=86.1
Q ss_pred CCcccccccCCCCceeeeeeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhc---CceEEEEEeCCCcccchhHHHHc
Q 023747 14 PKSCTLISNLPTTSLELLKVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFK---GKIMFTAVDIADEDLAKPFLTLF 89 (278)
Q Consensus 14 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~---~~v~f~~vd~~~~~~~~~l~~~~ 89 (278)
|....++.++..++...+. +++++|.||++| ++|+.+.|.|.++++.+. +.+.|+.+|++.. +.++++|
T Consensus 2 p~~~~v~~l~~~~~~~~~~----~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~---~~l~~~~ 74 (111)
T 3uvt_A 2 PLGSTVLALTENNFDDTIA----EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAE---RNICSKY 74 (111)
T ss_dssp ---CCSEECCTTTHHHHHH----SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTC---HHHHHHT
T ss_pred CCCCcceEcChhhHHHHhc----CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEecccc---HhHHHhc
Confidence 3444577788888777655 668999999999 999999999999999986 3599999999999 8999999
Q ss_pred CCCCCCceEEEEecCCcceeecCCCCCChHHHHHHHHHH
Q 023747 90 GLEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRL 128 (278)
Q Consensus 90 ~i~~~~Ptl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~ 128 (278)
+|.++ ||+ .++.+|. ....+.|..+.++|.+|+.+.
T Consensus 75 ~v~~~-Pt~-~~~~~g~-~~~~~~g~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 75 SVRGY-PTL-LLFRGGK-KVSEHSGGRDLDSLHRFVLSQ 110 (111)
T ss_dssp TCCSS-SEE-EEEETTE-EEEEECSCCSHHHHHHHHHHH
T ss_pred CCCcc-cEE-EEEeCCc-EEEeccCCcCHHHHHHHHHhc
Confidence 99999 999 5555443 344568999999999999864
No 123
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.53 E-value=4.4e-14 Score=101.96 Aligned_cols=103 Identities=15% Similarity=0.147 Sum_probs=85.4
Q ss_pred cccccCCCCceeeeeeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCc
Q 023747 18 TLISNLPTTSLELLKVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKN 96 (278)
Q Consensus 18 ~~v~~~~~~~~~~~~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~P 96 (278)
.++.++.+++...+ .+.+++++++||++| ++|+.+.|.+.++++.+.+.+.|+.+|++.+ +.++++|+|.++ |
T Consensus 3 ~v~~l~~~~~~~~~--~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~~~~~v~~~-P 76 (107)
T 2i4a_A 3 HTLAVSDSSFDQDV--LKASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNIDDN---PETPNAYQVRSI-P 76 (107)
T ss_dssp CEEECCTTTHHHHT--TTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTSEEEEEEETTTC---CHHHHHTTCCSS-S
T ss_pred ceeecchhhhhHHH--HhCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCCcEEEEEEECCCC---HHHHHhcCCCcc-C
Confidence 35666676665443 356789999999999 9999999999999999998899999999998 899999999999 9
Q ss_pred eEEEEecCCcceeecCCCCCChHHHHHHHHHH
Q 023747 97 TVVTAFDNKAISKFLLESDLTPSNIEEFCSRL 128 (278)
Q Consensus 97 tl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~ 128 (278)
|+ .++.+|. ....+.|..+.+.+.+|+++.
T Consensus 77 t~-~~~~~G~-~~~~~~G~~~~~~l~~~l~~~ 106 (107)
T 2i4a_A 77 TL-MLVRDGK-VIDKKVGALPKSQLKAWVESA 106 (107)
T ss_dssp EE-EEEETTE-EEEEEESCCCHHHHHHHHHHT
T ss_pred EE-EEEeCCE-EEEEecCCCCHHHHHHHHHhc
Confidence 99 5555443 344467889999999999874
No 124
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.53 E-value=4.7e-14 Score=103.16 Aligned_cols=104 Identities=10% Similarity=0.113 Sum_probs=86.9
Q ss_pred ccccCCCCceeeeeeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCce
Q 023747 19 LISNLPTTSLELLKVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNT 97 (278)
Q Consensus 19 ~v~~~~~~~~~~~~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Pt 97 (278)
++.++.+++...+ .+.+++++|+||++| ++|+.+.|.|+++++.+++++.|+.+|++.. +.++++|+|.++ ||
T Consensus 9 v~~l~~~~~~~~~--~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~---~~~~~~~~v~~~-Pt 82 (115)
T 1thx_A 9 VITITDAEFESEV--LKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEIDPN---PTTVKKYKVEGV-PA 82 (115)
T ss_dssp EEECCGGGHHHHT--TTCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEESTTC---HHHHHHTTCCSS-SE
T ss_pred eEEeeccchhhHh--hcCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCcEEEEEEEcCCC---HHHHHHcCCCce-eE
Confidence 5666666665443 356789999999999 9999999999999999998899999999998 899999999999 99
Q ss_pred EEEEecCCcceeecCCCCCChHHHHHHHHHHhc
Q 023747 98 VVTAFDNKAISKFLLESDLTPSNIEEFCSRLLH 130 (278)
Q Consensus 98 l~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 130 (278)
+ .++.+|. ....+.|..+.+++.+|+++.+.
T Consensus 83 ~-~~~~~G~-~~~~~~g~~~~~~l~~~l~~~l~ 113 (115)
T 1thx_A 83 L-RLVKGEQ-ILDSTEGVISKDKLLSFLDTHLN 113 (115)
T ss_dssp E-EEEETTE-EEEEEESCCCHHHHHHHHHHHHC
T ss_pred E-EEEcCCE-EEEEecCCCCHHHHHHHHHHHhc
Confidence 9 5555443 34456788999999999998874
No 125
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.53 E-value=5.4e-14 Score=106.80 Aligned_cols=106 Identities=11% Similarity=0.073 Sum_probs=89.0
Q ss_pred cccccCCCCceeeeeeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCc---eEEEEEeCCCcccchhHHHHcCCCC
Q 023747 18 TLISNLPTTSLELLKVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGK---IMFTAVDIADEDLAKPFLTLFGLEE 93 (278)
Q Consensus 18 ~~v~~~~~~~~~~~~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~---v~f~~vd~~~~~~~~~l~~~~~i~~ 93 (278)
.++.++..++... ...+++++|+||++| ++|+.+.|.|.++++.+.+. +.|+.||++.+ ..++++|+|.+
T Consensus 18 ~v~~l~~~~~~~~---~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~---~~~~~~~~v~~ 91 (140)
T 2dj1_A 18 GVWVLNDGNFDNF---VADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSA---SMLASKFDVSG 91 (140)
T ss_dssp TEEECCTTTHHHH---HTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTC---HHHHHHTTCCS
T ss_pred CCEEcChHhHHHH---HhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCccc---HHHHHHCCCCc
Confidence 3566666666543 345789999999999 99999999999999999875 99999999999 89999999999
Q ss_pred CCceEEEEecCCcceeecCCCCCChHHHHHHHHHHhcCcc
Q 023747 94 SKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHGTL 133 (278)
Q Consensus 94 ~~Ptl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~~~ 133 (278)
+ ||+ .++.+|. ...+.|..+.+.|.+|+.+.+....
T Consensus 92 ~-Pt~-~~~~~G~--~~~~~g~~~~~~l~~~l~~~~~~~~ 127 (140)
T 2dj1_A 92 Y-PTI-KILKKGQ--AVDYDGSRTQEEIVAKVREVSQPDW 127 (140)
T ss_dssp S-SEE-EEEETTE--EEECCSCCCHHHHHHHHHHHHSSSC
T ss_pred c-CeE-EEEECCc--EEEcCCCCCHHHHHHHHHHhcCCCC
Confidence 9 999 5555554 4456899999999999999986544
No 126
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.53 E-value=2.3e-14 Score=107.76 Aligned_cols=107 Identities=20% Similarity=0.194 Sum_probs=89.1
Q ss_pred cccccCCCCceeeeeeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhc----CceEEEEEeCCCcccchhHHHHcCCC
Q 023747 18 TLISNLPTTSLELLKVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFK----GKIMFTAVDIADEDLAKPFLTLFGLE 92 (278)
Q Consensus 18 ~~v~~~~~~~~~~~~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~----~~v~f~~vd~~~~~~~~~l~~~~~i~ 92 (278)
.++.++..++...+ .+.+++++|+||++| ++|+.+.|.|.++++.++ +.+.|+.||++.+ +.++++|+|.
T Consensus 8 ~v~~l~~~~~~~~~--~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~---~~l~~~~~v~ 82 (133)
T 1x5d_A 8 DVIELTDDSFDKNV--LDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVN---QVLASRYGIR 82 (133)
T ss_dssp SCEECCTTHHHHHT--TTSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTC---CHHHHHHTCC
T ss_pred cCEEcCHhhHHHHH--hcCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCC---HHHHHhCCCC
Confidence 35666666665433 245678999999999 999999999999999998 7799999999998 8999999999
Q ss_pred CCCceEEEEecCCcceeecCCCCCChHHHHHHHHHHhcCc
Q 023747 93 ESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHGT 132 (278)
Q Consensus 93 ~~~Ptl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~~ 132 (278)
++ ||+ .+++.+. ....+.|..+.+++.+|+.+.+...
T Consensus 83 ~~-Pt~-~~~~~g~-~~~~~~G~~~~~~l~~~l~~~~~~~ 119 (133)
T 1x5d_A 83 GF-PTI-KIFQKGE-SPVDYDGGRTRSDIVSRALDLFSDN 119 (133)
T ss_dssp SS-SEE-EEEETTE-EEEEECSCCSHHHHHHHHHHHHHHH
T ss_pred ee-CeE-EEEeCCC-ceEEecCCCCHHHHHHHHHHHhhcc
Confidence 99 999 6666543 4555689999999999999987543
No 127
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.52 E-value=5.6e-14 Score=106.17 Aligned_cols=101 Identities=16% Similarity=0.247 Sum_probs=88.0
Q ss_pred CeEEEcccchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcC--CCeE
Q 023747 149 NVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEE--YPTL 224 (278)
Q Consensus 149 ~v~~l~~~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~--~Ptl 224 (278)
.|..++.++|.+++ +.+.+++|.||++ |++|+.+.|.++++|+.+++ ++.|+.+|.+++ .+ ..|++.+ +|++
T Consensus 7 lv~~~t~~~f~~~~-~~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~g--k~~f~~vd~d~~~~~a~~~gi~~~~iPtl 82 (133)
T 2djk_A 7 LIGEIGPETYSDYM-SAGIPLAYIFAET-AEERKELSDKLKPIAEAQRG--VINFGTIDAKAFGAHAGNLNLKTDKFPAF 82 (133)
T ss_dssp CSEECCHHHHHHHH-HTTSCEEEEECSC-SSSHHHHHHHHHHHHHSSTT--TSEEEEECTTTTGGGTTTTTCCSSSSSEE
T ss_pred ceeccChHHHHHHh-cCCCCEEEEEecC-hhhHHHHHHHHHHHHHHhCC--eEEEEEEchHHhHHHHHHcCCCcccCCEE
Confidence 37789999999875 6678999999999 89999999999999999988 799999999988 55 5899999 9999
Q ss_pred EEEeC--CCccCceEec--CCCCHHHHHHHHHHHhc
Q 023747 225 LFYPA--GDKANPIKVS--ARSSSKNIAAFIKEQLK 256 (278)
Q Consensus 225 ~~f~~--g~~~~~~~~~--g~~~~~~l~~~i~~~~~ 256 (278)
++|++ |+.. .+. |..+.+.|.+||.+.+.
T Consensus 83 ~i~~~~~g~~~---~~~~~g~~~~~~l~~fi~~~l~ 115 (133)
T 2djk_A 83 AIQEVAKNQKF---PFDQEKEITFEAIKAFVDDFVA 115 (133)
T ss_dssp EEECTTTCCBC---CCCSSSCCCHHHHHHHHHHHHH
T ss_pred EEEecCcCccc---CCCCccccCHHHHHHHHHHHHc
Confidence 99986 4432 444 89999999999999884
No 128
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.52 E-value=7.5e-14 Score=107.26 Aligned_cols=104 Identities=19% Similarity=0.223 Sum_probs=88.3
Q ss_pred ccccCCCCceeeeeeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCce
Q 023747 19 LISNLPTTSLELLKVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNT 97 (278)
Q Consensus 19 ~v~~~~~~~~~~~~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Pt 97 (278)
++.++..++...+ ..+++++|+||++| ++|+.+.|.|+++++.+.+++.|+.||++.+ +.++++|+|.++ ||
T Consensus 40 v~~l~~~~~~~~~---~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~---~~l~~~~~v~~~-Pt 112 (148)
T 3p2a_A 40 VINATAETLDKLL---QDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGKVRFVKVNTEAE---PALSTRFRIRSI-PT 112 (148)
T ss_dssp CEECCTTTHHHHT---TCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTC---HHHHHHTTCCSS-SE
T ss_pred ceecCHHHHHHHH---hcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCceEEEEEECcCC---HHHHHHCCCCcc-CE
Confidence 4556666665544 67889999999999 9999999999999999998899999999999 999999999999 99
Q ss_pred EEEEecCCcceeecCCCCCChHHHHHHHHHHhcC
Q 023747 98 VVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHG 131 (278)
Q Consensus 98 l~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~ 131 (278)
+ .++..|. ....+.|..+.+.|.+|+++.+..
T Consensus 113 ~-~~~~~G~-~~~~~~G~~~~~~l~~~l~~~l~~ 144 (148)
T 3p2a_A 113 I-MLYRNGK-MIDMLNGAVPKAPFDNWLDEQLSR 144 (148)
T ss_dssp E-EEEETTE-EEEEESSCCCHHHHHHHHHHHHHS
T ss_pred E-EEEECCe-EEEEEeCCCCHHHHHHHHHHHhcc
Confidence 9 5565443 344568999999999999998753
No 129
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.52 E-value=5e-14 Score=101.94 Aligned_cols=102 Identities=15% Similarity=0.179 Sum_probs=85.4
Q ss_pred ccccCCCCceeeeeeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCce
Q 023747 19 LISNLPTTSLELLKVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNT 97 (278)
Q Consensus 19 ~v~~~~~~~~~~~~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Pt 97 (278)
++.++.+++.... +.+++++|+||++| ++|+.+.|.+.++++.+++.+.|+.+|++.. +.++++|+|.++ ||
T Consensus 6 v~~l~~~~~~~~~---~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~~~~~i~~~-Pt 78 (109)
T 3tco_A 6 TLVLTEENFDEVI---RNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGKAVFGRLNVDEN---QKIADKYSVLNI-PT 78 (109)
T ss_dssp CEECCTTTHHHHH---HHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTC---HHHHHHTTCCSS-SE
T ss_pred EEEecHHHHHHHH---hcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCCceEEEEccccC---HHHHHhcCcccC-CE
Confidence 4556666655443 45889999999999 9999999999999999998899999999999 999999999999 99
Q ss_pred EEEEecCCcceeecCCCCCChHHHHHHHHHHh
Q 023747 98 VVTAFDNKAISKFLLESDLTPSNIEEFCSRLL 129 (278)
Q Consensus 98 l~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 129 (278)
+ .++.+|. ....+.|..+.+++.+++++++
T Consensus 79 ~-~~~~~g~-~~~~~~g~~~~~~l~~~l~~~l 108 (109)
T 3tco_A 79 T-LIFVNGQ-LVDSLVGAVDEDTLESTVNKYL 108 (109)
T ss_dssp E-EEEETTE-EEEEEESCCCHHHHHHHHHHHC
T ss_pred E-EEEcCCc-EEEeeeccCCHHHHHHHHHHHh
Confidence 9 5554443 3444688999999999999865
No 130
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.52 E-value=6.4e-15 Score=111.18 Aligned_cols=102 Identities=9% Similarity=0.060 Sum_probs=85.5
Q ss_pred cccCCCCceeeeeeeecCCceEEEEEeCc---cchHHHHHHHHHHHHHhcCc-eEEEEEeCCCcccchhHHHHcCCCCCC
Q 023747 20 ISNLPTTSLELLKVSQIDTLDMVYVFAKA---DDLKSLLEPLEDIARNFKGK-IMFTAVDIADEDLAKPFLTLFGLEESK 95 (278)
Q Consensus 20 v~~~~~~~~~~~~~~~~~~~~~v~F~~~~---~~c~~~~~~~~~la~~~~~~-v~f~~vd~~~~~~~~~l~~~~~i~~~~ 95 (278)
..++.++|+..+ ..+.+++|.||++| ++|+.+.|.+++++++|.|+ +.|++||.+++ ++++.+|||.+.
T Consensus 20 ~~~t~~~F~~~v---~~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvDe~---~~lA~~ygV~sI- 92 (140)
T 2qgv_A 20 TPVSESRLDDWL---TQAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQS---EAIGDRFGAFRF- 92 (140)
T ss_dssp EECCHHHHHHHH---HTCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHHHH---HHHHHHHTCCSS-
T ss_pred ccCCHHHHHHHH---hCCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECCCC---HHHHHHcCCccC-
Confidence 456667776665 36678999999976 79999999999999999999 99999999999 999999999999
Q ss_pred ceEEEEecCCcceeecCCCCCChHHHHHHHHHHhc
Q 023747 96 NTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLH 130 (278)
Q Consensus 96 Ptl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 130 (278)
||+ .+|.+|.. .....|..+.+.+.+++++.++
T Consensus 93 PTl-ilFk~G~~-v~~~~G~~~k~~l~~~i~~~l~ 125 (140)
T 2qgv_A 93 PAT-LVFTGGNY-RGVLNGIHPWAELINLMRGLVE 125 (140)
T ss_dssp SEE-EEEETTEE-EEEEESCCCHHHHHHHHHHHHC
T ss_pred CEE-EEEECCEE-EEEEecCCCHHHHHHHHHHHhc
Confidence 999 55555532 3345788999999999999874
No 131
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.52 E-value=1.2e-15 Score=114.43 Aligned_cols=107 Identities=25% Similarity=0.424 Sum_probs=90.2
Q ss_pred CCCeEEE-cccchHHHhhc---CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcC
Q 023747 147 NANVQIV-VGKTFDDLVLN---SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEE 220 (278)
Q Consensus 147 ~~~v~~l-~~~~~~~~i~~---~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~ 220 (278)
.+.+..+ +.++|.+.+.. .+++++|+||++||++|+.+.|.+.+++..+. ++.|+.+|++.+ ++ .+|++.+
T Consensus 13 ~~~~~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~---~v~~~~v~~~~~~~~~~~~~v~~ 89 (130)
T 1wmj_A 13 EGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP---GAVFLKVDVDELKEVAEKYNVEA 89 (130)
T ss_dssp CSSSBCCSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT---TBCCEECCTTTSGGGHHHHTCCS
T ss_pred CcceEEcCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC---CCEEEEEeccchHHHHHHcCCCc
Confidence 4456667 45889988865 47899999999999999999999999999986 499999999988 56 5899999
Q ss_pred CCeEEEEeCCCccCceEecCCCCHHHHHHHHHHHhcccC
Q 023747 221 YPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKEKD 259 (278)
Q Consensus 221 ~Ptl~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~~~~~ 259 (278)
+|++++|++|+.+. ++.| .+.+.|.++|.+.++...
T Consensus 90 ~Pt~~~~~~g~~~~--~~~g-~~~~~l~~~l~~~~~~~~ 125 (130)
T 1wmj_A 90 MPTFLFIKDGAEAD--KVVG-ARKDDLQNTIVKHVGATA 125 (130)
T ss_dssp SCCCCBCTTTTCCB--CCCT-TCTTTHHHHHHHHTSSSC
T ss_pred cceEEEEeCCeEEE--EEeC-CCHHHHHHHHHHHHhccC
Confidence 99999998887654 5677 578899999999887543
No 132
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.52 E-value=2.9e-14 Score=103.02 Aligned_cols=91 Identities=11% Similarity=0.112 Sum_probs=69.0
Q ss_pred eeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCceEEEEecCCcceee
Q 023747 32 KVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFDNKAISKF 110 (278)
Q Consensus 32 ~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Ptl~~~~~~~~~~~~ 110 (278)
...+.+++++|.||++| ++|+.+.|.+.++++++. .+.|+.||++.. +.++++|+|.++ ||+ .++.+|. ...
T Consensus 13 ~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~-~~~~~~vd~~~~---~~l~~~~~v~~~-Pt~-~~~~~G~-~~~ 85 (105)
T 4euy_A 13 TYIEEQQLVLLFIKTENCGVCDVMLRKVNYVLENYN-YVEKIEILLQDM---QEIAGRYAVFTG-PTV-LLFYNGK-EIL 85 (105)
T ss_dssp SSTTCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT-TEEEEEEEECCC------------CCC-CEE-EEEETTE-EEE
T ss_pred HHHhcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC-CceEEEEECCCC---HHHHHhcCCCCC-CEE-EEEeCCe-EEE
Confidence 33467889999999999 999999999999999995 599999999999 899999999999 999 5555443 334
Q ss_pred cCCCCCChHHHHHHHHHHh
Q 023747 111 LLESDLTPSNIEEFCSRLL 129 (278)
Q Consensus 111 ~~~g~~~~~~i~~fi~~~~ 129 (278)
.+.|..+.+++.+++++++
T Consensus 86 ~~~g~~~~~~l~~~l~~~~ 104 (105)
T 4euy_A 86 RESRFISLENLERTIQLFE 104 (105)
T ss_dssp EEESSCCHHHHHHHHHTTC
T ss_pred EEeCCcCHHHHHHHHHHhh
Confidence 4578899999999998754
No 133
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.52 E-value=2.5e-14 Score=107.83 Aligned_cols=96 Identities=20% Similarity=0.353 Sum_probs=78.1
Q ss_pred cchHHHhh---cCCCcEEEEEECCCChhHHHHHHHHH--HHHHHhcCCCceEEEEEeC---CCC-CC-CCCCC---cCCC
Q 023747 156 KTFDDLVL---NSHKDVLLEVYTPWCVTCETTSKQIE--KLAKHFKGLDNLVIAKIDA---SAN-EH-PKLQV---EEYP 222 (278)
Q Consensus 156 ~~~~~~i~---~~~~~~~v~f~~~~c~~c~~~~~~~~--~~a~~~~~~~~~~~~~vd~---~~~-~~-~~~~i---~~~P 222 (278)
.++++.+. ..+++++|.||++||++|+.+.|.+. +++..+.+ ++.++.||+ +.+ ++ .+|++ .++|
T Consensus 16 ~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~--~~~~~~vd~~~~~~~~~l~~~~~v~~~~~~P 93 (133)
T 3fk8_A 16 TQVKKALAAGKRTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAK--HFEVVKIDVGNFDRNLELSQAYGDPIQDGIP 93 (133)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHH--HCEEEEEECTTTTSSHHHHHHTTCGGGGCSS
T ss_pred hHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcC--CEEEEEEeCCcccchHHHHHHhCCccCCccc
Confidence 44444442 45899999999999999999999999 99999965 799999999 655 45 48999 9999
Q ss_pred eEEEE-eCCCccCceEecC-------CCCHHHHHHHHHHHh
Q 023747 223 TLLFY-PAGDKANPIKVSA-------RSSSKNIAAFIKEQL 255 (278)
Q Consensus 223 tl~~f-~~g~~~~~~~~~g-------~~~~~~l~~~i~~~~ 255 (278)
++++| ++|+.+. ++.| ..+.+.+.+||++..
T Consensus 94 t~~~~d~~G~~~~--~~~g~~~~~~~~~~~~~l~~~l~~l~ 132 (133)
T 3fk8_A 94 AVVVVNSDGKVRY--TTKGGELANARKMSDQGIYDFFAKIT 132 (133)
T ss_dssp EEEEECTTSCEEE--ECCSCTTTTGGGSCHHHHHHHHHHHH
T ss_pred eEEEECCCCCEEE--EecCCcccccccCCHHHHHHHHHHhc
Confidence 99999 6776543 5666 678999999998753
No 134
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.51 E-value=4.3e-14 Score=107.11 Aligned_cols=107 Identities=15% Similarity=0.222 Sum_probs=87.2
Q ss_pred cccccCCCCceeeeeee---------ecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHH
Q 023747 18 TLISNLPTTSLELLKVS---------QIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLT 87 (278)
Q Consensus 18 ~~v~~~~~~~~~~~~~~---------~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~ 87 (278)
.++.++..++...+... +.+++++|.||++| ++|+.+.|.|.++++++++.+.|+.||++.. +.+++
T Consensus 10 ~v~~l~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~---~~l~~ 86 (136)
T 2l5l_A 10 KVIHLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQIVIYKVDTEKE---QELAG 86 (136)
T ss_dssp SEEEECHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTTCEEEEEETTTC---HHHHH
T ss_pred ceEEecchHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCEEEEEEeCCCC---HHHHH
Confidence 34556565565444322 35689999999999 9999999999999999998899999999998 89999
Q ss_pred HcCCCCCCceEEEEec-CCcceeecCCCCCChHHHHHHHHHHhcC
Q 023747 88 LFGLEESKNTVVTAFD-NKAISKFLLESDLTPSNIEEFCSRLLHG 131 (278)
Q Consensus 88 ~~~i~~~~Ptl~~~~~-~~~~~~~~~~g~~~~~~i~~fi~~~~~~ 131 (278)
+|+|.++ ||+ .+++ +|... .+.|..+.+.|.+|+++.+..
T Consensus 87 ~~~v~~~-Pt~-~~~~~~G~~~--~~~G~~~~~~l~~~l~~~~~~ 127 (136)
T 2l5l_A 87 AFGIRSI-PSI-LFIPMEGKPE--MAQGAMPKASFKKAIDEFLLK 127 (136)
T ss_dssp HTTCCSS-CEE-EEECSSSCCE--EEESCCCHHHHHHHHHHHHTS
T ss_pred HcCCCCC-CEE-EEECCCCcEE--EEeCCCCHHHHHHHHHHHhhc
Confidence 9999999 999 6663 33332 457899999999999998754
No 135
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.51 E-value=3.3e-14 Score=110.37 Aligned_cols=102 Identities=11% Similarity=0.072 Sum_probs=84.7
Q ss_pred cccCCCCceeeeeeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCceE
Q 023747 20 ISNLPTTSLELLKVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTV 98 (278)
Q Consensus 20 v~~~~~~~~~~~~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Ptl 98 (278)
+.++..++...+ +.+++++|+||++| ++|+.+.|.|+++++++.+++.|+.||++.+ +.++++|+|.++ ||+
T Consensus 50 ~~l~~~~f~~~~---~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~~~~---~~l~~~~~i~~~-Pt~ 122 (155)
T 2ppt_A 50 AGIDPAILARAE---RDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQVRLAKIDTQAH---PAVAGRHRIQGI-PAF 122 (155)
T ss_dssp EECCHHHHHHHT---TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTS---THHHHHTTCCSS-SEE
T ss_pred ccCCHHHHHHHH---hCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCCEEEEEEeCCcc---HHHHHHcCCCcC-CEE
Confidence 344444443333 66789999999999 9999999999999999998899999999999 899999999999 999
Q ss_pred EEEecCCcceeecCCCCCChHHHHHHHHHHhc
Q 023747 99 VTAFDNKAISKFLLESDLTPSNIEEFCSRLLH 130 (278)
Q Consensus 99 ~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 130 (278)
.++.+|. ....+.|..+.++|.+|+++.++
T Consensus 123 -~~~~~G~-~~~~~~G~~~~~~l~~~l~~~l~ 152 (155)
T 2ppt_A 123 -ILFHKGR-ELARAAGARPASELVGFVRGKLG 152 (155)
T ss_dssp -EEEETTE-EEEEEESCCCHHHHHHHHHHHHC
T ss_pred -EEEeCCe-EEEEecCCCCHHHHHHHHHHHhc
Confidence 5555443 34446888999999999999875
No 136
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.51 E-value=1.2e-13 Score=100.41 Aligned_cols=103 Identities=19% Similarity=0.242 Sum_probs=84.9
Q ss_pred ccccCCCCceeeeeeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCce
Q 023747 19 LISNLPTTSLELLKVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNT 97 (278)
Q Consensus 19 ~v~~~~~~~~~~~~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Pt 97 (278)
++.++.+++...+. ..+++++|.||++| ++|+.+.|.+.++++.+.+++.|+.+|++.. +.++++|+|.++ ||
T Consensus 6 v~~l~~~~~~~~~~--~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~---~~l~~~~~v~~~-Pt 79 (111)
T 3gnj_A 6 LEKLDTNTFEQLIY--DEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEESFGFYYVDVEEE---KTLFQRFSLKGV-PQ 79 (111)
T ss_dssp SEECCHHHHHHHHT--TSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTC---HHHHHHTTCCSS-CE
T ss_pred ceecCHHHHHHHHH--hcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCCceEEEEEECCcC---hhHHHhcCCCcC-CE
Confidence 45555555444331 45689999999999 9999999999999999998899999999999 899999999999 99
Q ss_pred EEEEecCCcceeecCCCCCChHHHHHHHHHHh
Q 023747 98 VVTAFDNKAISKFLLESDLTPSNIEEFCSRLL 129 (278)
Q Consensus 98 l~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 129 (278)
+ .++.+|. ....+.|..+.+++.+|+++.+
T Consensus 80 ~-~~~~~g~-~~~~~~g~~~~~~l~~~l~~~l 109 (111)
T 3gnj_A 80 I-LYFKDGE-YKGKMAGDVEDDEVEQMIADVL 109 (111)
T ss_dssp E-EEEETTE-EEEEEESSCCHHHHHHHHHHHH
T ss_pred E-EEEECCE-EEEEEeccCCHHHHHHHHHHHh
Confidence 9 5555443 3344578899999999999876
No 137
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.51 E-value=6.3e-14 Score=96.88 Aligned_cols=81 Identities=19% Similarity=0.374 Sum_probs=70.9
Q ss_pred CcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcCCCeEEEEeCCCccCceEecCCCCH
Q 023747 167 KDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTLLFYPAGDKANPIKVSARSSS 244 (278)
Q Consensus 167 ~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~~Ptl~~f~~g~~~~~~~~~g~~~~ 244 (278)
...++.||++||++|+.+.|.++++++.+.+ ++.+..+|++++ ++ .+|++.++|++++ +|+. ++.|..+.
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G~~----~~~G~~~~ 74 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPD--AVEVEYINVMENPQKAMEYGIMAVPTIVI--NGDV----EFIGAPTK 74 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSS--SEEEEEEESSSSCCTTTSTTTCCSSEEEE--TTEE----ECCSSSSS
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCC--ceEEEEEECCCCHHHHHHCCCcccCEEEE--CCEE----eeecCCCH
Confidence 3578999999999999999999999999986 699999999988 56 5899999999998 5542 68888899
Q ss_pred HHHHHHHHHHh
Q 023747 245 KNIAAFIKEQL 255 (278)
Q Consensus 245 ~~l~~~i~~~~ 255 (278)
+.|.+||++.+
T Consensus 75 ~~l~~~l~~~l 85 (85)
T 1fo5_A 75 EALVEAIKKRL 85 (85)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhC
Confidence 99999998763
No 138
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.50 E-value=3.7e-14 Score=106.46 Aligned_cols=103 Identities=18% Similarity=0.223 Sum_probs=86.2
Q ss_pred ccccCCCCceeeeeeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCce
Q 023747 19 LISNLPTTSLELLKVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNT 97 (278)
Q Consensus 19 ~v~~~~~~~~~~~~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Pt 97 (278)
++.++..++...+ .+.+++++|.||++| ++|+.+.|.|.++++.+.+++.|+.||++.+ +.++++|+|.++ ||
T Consensus 24 v~~l~~~~f~~~~--~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~~~~---~~l~~~~~v~~~-Pt 97 (128)
T 2o8v_B 24 IIHLTDDSFDTDV--LKADGAILVDFWAEWCGPAKMIAPILDEIADEYQGKLTVAKLNIDQN---PGTAPKYGIRGI-PT 97 (128)
T ss_dssp SEEECTTTHHHHT--TTCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTTEEEEEEETTTC---CTTSGGGTCCSS-SE
T ss_pred cEecChhhHHHHH--HhcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCC---HHHHHHcCCCcc-CE
Confidence 5566666665433 456789999999999 9999999999999999998899999999998 899999999999 99
Q ss_pred EEEEecCCcceeecCCCCCChHHHHHHHHHHh
Q 023747 98 VVTAFDNKAISKFLLESDLTPSNIEEFCSRLL 129 (278)
Q Consensus 98 l~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 129 (278)
+ .++.+|. ....+.|..+.+++.+|+++.+
T Consensus 98 ~-~~~~~G~-~~~~~~G~~~~~~l~~~l~~~l 127 (128)
T 2o8v_B 98 L-LLFKNGE-VAATKVGALSKGQLKEFLDANL 127 (128)
T ss_dssp E-EEEETTE-EEEEEESCCCHHHHHHHHHHHH
T ss_pred E-EEEeCCE-EEEEEcCCCCHHHHHHHHHHhh
Confidence 9 5555443 3445688899999999999875
No 139
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.50 E-value=7e-14 Score=105.21 Aligned_cols=107 Identities=9% Similarity=0.079 Sum_probs=87.7
Q ss_pred cccccCCCCceeeeeeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhc--CceEEEEEeCCCcccchhHHHHcCCCCC
Q 023747 18 TLISNLPTTSLELLKVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFK--GKIMFTAVDIADEDLAKPFLTLFGLEES 94 (278)
Q Consensus 18 ~~v~~~~~~~~~~~~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~--~~v~f~~vd~~~~~~~~~l~~~~~i~~~ 94 (278)
.++.++..++...+. +.+++++|+||++| ++|+.+.|.|.++++.++ +.+.|+.+|++.+ ..++++|+|.++
T Consensus 8 ~v~~l~~~~~~~~~~--~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~---~~~~~~~~v~~~ 82 (133)
T 2dj3_A 8 PVKVVVGKTFDAIVM--DPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATAN---DITNDQYKVEGF 82 (133)
T ss_dssp SSEECCTTTCCCCCT--CTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTS---CCCCSSCCCSSS
T ss_pred ceEEEcCCCHHHHhc--cCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcC---HHHHhhcCCCcC
Confidence 467777777766553 25789999999999 999999999999999998 4699999999988 789999999999
Q ss_pred CceEEEEecCCc-ceeecCC-CCCChHHHHHHHHHHhcC
Q 023747 95 KNTVVTAFDNKA-ISKFLLE-SDLTPSNIEEFCSRLLHG 131 (278)
Q Consensus 95 ~Ptl~~~~~~~~-~~~~~~~-g~~~~~~i~~fi~~~~~~ 131 (278)
||+ .+++.+. .....+. |..+.++|.+|+.+.+..
T Consensus 83 -Pt~-~~~~~g~~~~~~~~~gg~~~~~~l~~~l~~~~~~ 119 (133)
T 2dj3_A 83 -PTI-YFAPSGDKKNPIKFEGGNRDLEHLSKFIDEHATK 119 (133)
T ss_dssp -SEE-EEECTTCTTSCEECCSSCCSTTHHHHHHHHHSSS
T ss_pred -CEE-EEEeCCCcccceEecCCCcCHHHHHHHHHHhccc
Confidence 999 6666543 2333456 558999999999998754
No 140
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.50 E-value=5.1e-14 Score=103.02 Aligned_cols=87 Identities=10% Similarity=0.160 Sum_probs=69.1
Q ss_pred CCcEEEEEECCCChhHHHHHHHHHHHHHHhcCC---CceEEEEEeCCCC---CC-CCCCCcCCCeEEEEeCCCccCceEe
Q 023747 166 HKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGL---DNLVIAKIDASAN---EH-PKLQVEEYPTLLFYPAGDKANPIKV 238 (278)
Q Consensus 166 ~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~---~~~~~~~vd~~~~---~~-~~~~i~~~Ptl~~f~~g~~~~~~~~ 238 (278)
...++|+|||+||++|+.+.+.+. ..+... ..+.+.++|++.+ ++ .+++|.++||+++|++|+.+. +.
T Consensus 18 ~~~~LV~F~A~wC~~Ck~~~~~i~---~~~~~~a~~~~~~l~~vdv~~~~~~~la~~~~V~g~PT~i~f~~G~ev~--Ri 92 (116)
T 3dml_A 18 AELRLLMFEQPGCLYCARWDAEIA---PQYPLTDEGRAAPVQRLQMRDPLPPGLELARPVTFTPTFVLMAGDVESG--RL 92 (116)
T ss_dssp -CEEEEEEECTTCHHHHHHHHHTT---TTGGGSHHHHHSCEEEEETTSCCCTTCBCSSCCCSSSEEEEEETTEEEE--EE
T ss_pred CCCEEEEEECCCCHHHHHHHHHHH---hhHHHhhhcccceEEEEECCCCCchhHHHHCCCCCCCEEEEEECCEEEe--ee
Confidence 467899999999999999986433 333321 0267888888876 45 478999999999999998875 78
Q ss_pred cCCCCHHHHHHHHHHHhcc
Q 023747 239 SARSSSKNIAAFIKEQLKE 257 (278)
Q Consensus 239 ~g~~~~~~l~~~i~~~~~~ 257 (278)
.|..+.+.|..||.+.+..
T Consensus 93 ~G~~~~~~f~~~L~~~l~~ 111 (116)
T 3dml_A 93 EGYPGEDFFWPMLARLIGQ 111 (116)
T ss_dssp ECCCCHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHhh
Confidence 9999999999999987753
No 141
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.50 E-value=5.2e-14 Score=101.35 Aligned_cols=102 Identities=15% Similarity=0.136 Sum_probs=83.4
Q ss_pred ccccCCCCceeeeeeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCce
Q 023747 19 LISNLPTTSLELLKVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNT 97 (278)
Q Consensus 19 ~v~~~~~~~~~~~~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Pt 97 (278)
++.++..++. ...+.++++++.||++| ++|+.+.|.|+++++.+.+.+.|+.+|++.. +.++++|||.++ ||
T Consensus 2 v~~l~~~~~~---~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~---~~~~~~~~v~~~-Pt 74 (105)
T 1nsw_A 2 TMTLTDANFQ---QAIQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDEN---PETTSQFGIMSI-PT 74 (105)
T ss_dssp CEEECTTTHH---HHHSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTTCEEEEEETTTC---HHHHHHTTCCSS-SE
T ss_pred ceeccHHhHH---HHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCcEEEEEECcCC---HHHHHHcCCccc-cE
Confidence 3455565554 33456789999999999 9999999999999999998899999999998 899999999999 99
Q ss_pred EEEEecCCcceeecCCCCCChHHHHHHHHHHh
Q 023747 98 VVTAFDNKAISKFLLESDLTPSNIEEFCSRLL 129 (278)
Q Consensus 98 l~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 129 (278)
+ .++.+|. ....+.|..+.+++.+++++.+
T Consensus 75 ~-~~~~~G~-~~~~~~G~~~~~~l~~~l~~~l 104 (105)
T 1nsw_A 75 L-ILFKGGR-PVKQLIGYQPKEQLEAQLADVL 104 (105)
T ss_dssp E-EEEETTE-EEEEEESCCCHHHHHHHTTTTT
T ss_pred E-EEEeCCe-EEEEEecCCCHHHHHHHHHHHh
Confidence 9 5555443 3445578899999999887654
No 142
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.50 E-value=4.9e-14 Score=107.39 Aligned_cols=109 Identities=16% Similarity=0.193 Sum_probs=88.6
Q ss_pred cccccCCCCceeeeeeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCc
Q 023747 18 TLISNLPTTSLELLKVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKN 96 (278)
Q Consensus 18 ~~v~~~~~~~~~~~~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~P 96 (278)
.++.++..++.. ...+.+++++|+||++| ++|+.+.|.|.++++.+.+++.|+.||++.. +.++++|+|.++ |
T Consensus 7 ~v~~l~~~~f~~--~~~~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~---~~l~~~~~v~~~-P 80 (140)
T 3hz4_A 7 SIIEFEDMTWSQ--QVEDSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSSAVFGRINIATN---PWTAEKYGVQGT-P 80 (140)
T ss_dssp TEEEECHHHHHH--HTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEETTTC---HHHHHHHTCCEE-S
T ss_pred ceEEcchHhHHH--HHHhCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCCceEEEEEECCcC---HhHHHHCCCCcC-C
Confidence 345565555542 23345788999999999 9999999999999999999999999999999 999999999999 9
Q ss_pred eEEEEecCCcceeecCCCCCChHHHHHHHHHHhcCccc
Q 023747 97 TVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHGTLT 134 (278)
Q Consensus 97 tl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~~~~ 134 (278)
|+ .++.+|. ....+.|..+.+.+.+|+++.+.....
T Consensus 81 t~-~~~~~G~-~~~~~~G~~~~~~l~~~l~~~l~~~~~ 116 (140)
T 3hz4_A 81 TF-KFFCHGR-PVWEQVGQIYPSILKNAVRDMLQHGEE 116 (140)
T ss_dssp EE-EEEETTE-EEEEEESSCCHHHHHHHHHHHHHHHHH
T ss_pred EE-EEEeCCc-EEEEEcCCCCHHHHHHHHHHHhccccc
Confidence 99 5555443 344568899999999999998865433
No 143
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.50 E-value=1e-13 Score=99.17 Aligned_cols=101 Identities=16% Similarity=0.156 Sum_probs=84.0
Q ss_pred cccCCCCceeeeeeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCceE
Q 023747 20 ISNLPTTSLELLKVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTV 98 (278)
Q Consensus 20 v~~~~~~~~~~~~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Ptl 98 (278)
+.++..++...+ +.+++++++||++| ++|+.+.|.+.++++.+++ +.|+.+|++.. +.++++|++.++ ||+
T Consensus 2 ~~l~~~~~~~~~---~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~v~~~~~---~~~~~~~~v~~~-Pt~ 73 (104)
T 2e0q_A 2 IHLDSKNFDSFL---ASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ-VGFGKLNSDEN---PDIAARYGVMSL-PTV 73 (104)
T ss_dssp EECCTTTHHHHH---HHSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTC---HHHHHHTTCCSS-CEE
T ss_pred eecCHHHHHHHH---hcCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC-ceEEEEECCCC---HHHHHhCCcccc-CEE
Confidence 345555555444 56789999999999 9999999999999999998 99999999998 899999999999 999
Q ss_pred EEEecCCcceeecCCCCCChHHHHHHHHHHhc
Q 023747 99 VTAFDNKAISKFLLESDLTPSNIEEFCSRLLH 130 (278)
Q Consensus 99 ~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 130 (278)
.++.+|. ....+.|..+.+++.+|+++.++
T Consensus 74 -~~~~~g~-~~~~~~g~~~~~~l~~~l~~~l~ 103 (104)
T 2e0q_A 74 -IFFKDGE-PVDEIIGAVPREEIEIRIKNLLG 103 (104)
T ss_dssp -EEEETTE-EEEEEESCCCHHHHHHHHHHHHT
T ss_pred -EEEECCe-EhhhccCCCCHHHHHHHHHHHhc
Confidence 5555443 34456788999999999998763
No 144
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.49 E-value=7.5e-14 Score=103.22 Aligned_cols=106 Identities=21% Similarity=0.175 Sum_probs=86.5
Q ss_pred cccccccCCCCceeeeeeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCC
Q 023747 16 SCTLISNLPTTSLELLKVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEES 94 (278)
Q Consensus 16 ~~~~v~~~~~~~~~~~~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~ 94 (278)
+.+++.++..++...+ .+.+++++|+||++| ++|+.+.|.|.++++++.+.+.|+.+|++.+ +.++++|+|.++
T Consensus 12 ~~~~~~~~~~~f~~~v--~~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~v~~~~vd~d~~---~~l~~~~~v~~~ 86 (119)
T 1w4v_A 12 STTFNIQDGPDFQDRV--VNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDH---TDLAIEYEVSAV 86 (119)
T ss_dssp CSEEECCSHHHHHHHT--TTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEETTTT---HHHHHHTTCCSS
T ss_pred ceEEEecChhhHHHHH--HcCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCCCC---HHHHHHcCCCcc
Confidence 3345666666665433 245678999999999 9999999999999999988899999999998 899999999999
Q ss_pred CceEEEEecCCcceeecCCCCCChHHHHHHHHHHh
Q 023747 95 KNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLL 129 (278)
Q Consensus 95 ~Ptl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 129 (278)
||+ .++.+|. ....+.|..+.+.+.+|+++.+
T Consensus 87 -Pt~-~~~~~G~-~~~~~~G~~~~~~l~~~l~~~l 118 (119)
T 1w4v_A 87 -PTV-LAMKNGD-VVDKFVGIKDEDQLEAFLKKLI 118 (119)
T ss_dssp -SEE-EEEETTE-EEEEEESCCCHHHHHHHHHHHH
T ss_pred -cEE-EEEeCCc-EEEEEcCCCCHHHHHHHHHHHh
Confidence 999 5555443 3445678899999999998865
No 145
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.49 E-value=5.1e-14 Score=97.35 Aligned_cols=80 Identities=16% Similarity=0.309 Sum_probs=70.8
Q ss_pred cEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcCCCeEEEEeCCCccCceEecCCCCHH
Q 023747 168 DVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTLLFYPAGDKANPIKVSARSSSK 245 (278)
Q Consensus 168 ~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~~Ptl~~f~~g~~~~~~~~~g~~~~~ 245 (278)
..+|.||++||++|+.+.|.++++++.+.+ ++.++.+|++.+ ++ .+|++.++|++++ +|+. ++.|..+.+
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G~~----~~~G~~~~~ 74 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGD--KIDVEKIDIMVDREKAIEYGLMAVPAIAI--NGVV----RFVGAPSRE 74 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCS--SCCEEEECTTTCGGGGGGTCSSCSSEEEE--TTTE----EEECSSCCH
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcC--CeEEEEEECCCCHHHHHhCCceeeCEEEE--CCEE----EEccCCCHH
Confidence 358899999999999999999999999986 699999999988 56 5899999999998 6653 688888999
Q ss_pred HHHHHHHHHh
Q 023747 246 NIAAFIKEQL 255 (278)
Q Consensus 246 ~l~~~i~~~~ 255 (278)
.|.+||++.+
T Consensus 75 ~l~~~l~~~l 84 (85)
T 1nho_A 75 ELFEAINDEM 84 (85)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHHh
Confidence 9999998875
No 146
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.49 E-value=3.6e-14 Score=105.17 Aligned_cols=104 Identities=22% Similarity=0.144 Sum_probs=82.9
Q ss_pred ccccCCCCceeeeeeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCce
Q 023747 19 LISNLPTTSLELLKVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNT 97 (278)
Q Consensus 19 ~v~~~~~~~~~~~~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Pt 97 (278)
++.++.+++.. ...+.+++++|.||++| ++|+.+.|.|.++++.+.+.+.|+.||++.. +.++++|+|.++ ||
T Consensus 5 v~~l~~~~f~~--~~~~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~---~~~~~~~~v~~~-Pt 78 (122)
T 3aps_A 5 SIDLTPQTFNE--KVLQGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKGKVRAGKVDCQAY---PQTCQKAGIKAY-PS 78 (122)
T ss_dssp SEECCHHHHHH--HTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTC---HHHHHHTTCCSS-SE
T ss_pred hhcCCHHHHHH--HHhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCcCC---HHHHHHcCCCcc-ce
Confidence 44455544432 22356788999999999 9999999999999999998899999999999 899999999999 99
Q ss_pred EEEEecCCcceeecCCCC----CChHHHHHHHHHHhc
Q 023747 98 VVTAFDNKAISKFLLESD----LTPSNIEEFCSRLLH 130 (278)
Q Consensus 98 l~~~~~~~~~~~~~~~g~----~~~~~i~~fi~~~~~ 130 (278)
+ .+++.+.. ...+.|. .+.+.+.+|+++.++
T Consensus 79 ~-~~~~~~~~-~~~~~g~~~~~~~~~~l~~~l~~~l~ 113 (122)
T 3aps_A 79 V-KLYQYERA-KKSIWEEQINSRDAKTIAALIYGKLE 113 (122)
T ss_dssp E-EEEEEEGG-GTEEEEEEECCSCHHHHHHHHHHHHH
T ss_pred E-EEEeCCCc-cceeeccccCcCCHHHHHHHHHHHHH
Confidence 9 56643332 2223443 899999999999875
No 147
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.49 E-value=4.6e-14 Score=105.10 Aligned_cols=99 Identities=21% Similarity=0.299 Sum_probs=80.5
Q ss_pred eEEEcccchHHHhhc-CCCcEEEEEECC-------CChhHHHHHHHHHHHHHHhcCCCceEEEEEeC-------CCC-CC
Q 023747 150 VQIVVGKTFDDLVLN-SHKDVLLEVYTP-------WCVTCETTSKQIEKLAKHFKGLDNLVIAKIDA-------SAN-EH 213 (278)
Q Consensus 150 v~~l~~~~~~~~i~~-~~~~~~v~f~~~-------~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~-------~~~-~~ 213 (278)
+...+.++|.+.+.. .+++++|.||++ ||++|+.+.|.+.+++..+.+ ++.|+.+|+ +.+ ++
T Consensus 7 v~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~--~~~~~~vd~~~~~~~~d~~~~~ 84 (123)
T 1wou_A 7 VSVSGFEEFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISE--GCVFIYCQVGEKPYWKDPNNDF 84 (123)
T ss_dssp EEEESHHHHHHHHHTTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCT--TEEEEEEECCCHHHHHCTTCHH
T ss_pred EEeccHHHHHHHHHHhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCC--CcEEEEEECCCchhhhchhHHH
Confidence 566778999998866 588999999999 999999999999999999876 699999999 555 45
Q ss_pred -CCCCCcCCCeEEEEeCCCccCceEecCCCCHHHHHHHHHH
Q 023747 214 -PKLQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKE 253 (278)
Q Consensus 214 -~~~~i~~~Ptl~~f~~g~~~~~~~~~g~~~~~~l~~~i~~ 253 (278)
.+|+|.++||+++|.++... ......+.+.|.+||.+
T Consensus 85 ~~~~~i~~~Pt~~~~~~~~~~---~g~~~~~~~~l~~~i~~ 122 (123)
T 1wou_A 85 RKNLKVTAVPTLLKYGTPQKL---VESECLQANLVEMLFSE 122 (123)
T ss_dssp HHHHCCCSSSEEEETTSSCEE---EGGGGGCHHHHHHHHHC
T ss_pred HHHCCCCeeCEEEEEcCCceE---eccccCCHHHHHHHHhc
Confidence 47899999999999875432 22223577888888864
No 148
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.49 E-value=2.5e-13 Score=103.25 Aligned_cols=105 Identities=16% Similarity=0.189 Sum_probs=77.9
Q ss_pred cccccCCCCceeeeeeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCc
Q 023747 18 TLISNLPTTSLELLKVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKN 96 (278)
Q Consensus 18 ~~v~~~~~~~~~~~~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~P 96 (278)
.++.++..++...+. +.+. ++|+||++| ++|+.+.|.|.+++.++.+.+.|+.||++.+ +.++++|+|.++ |
T Consensus 34 ~v~~l~~~~~~~~~~--~~~~-vvv~f~~~~C~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~---~~l~~~~~v~~~-P 106 (140)
T 1v98_A 34 WVVEADEKGFAQEVA--GAPL-TLVDFFAPWCGPCRLVSPILEELARDHAGRLKVVKVNVDEH---PGLAARYGVRSV-P 106 (140)
T ss_dssp -----------------CCCE-EEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTC---HHHHHHTTCCSS-S
T ss_pred ccccCCHHHHHHHHH--cCCC-EEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCCC---HHHHHHCCCCcc-C
Confidence 456666655554433 2344 999999999 9999999999999999998899999999998 899999999999 9
Q ss_pred eEEEEecCCcceeecCCCCCChHHHHHHHHHHhcC
Q 023747 97 TVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHG 131 (278)
Q Consensus 97 tl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~ 131 (278)
|+ .++.+|. ....+.|..+.+.+.+|+++.+++
T Consensus 107 t~-~~~~~G~-~~~~~~G~~~~~~l~~~i~~~l~~ 139 (140)
T 1v98_A 107 TL-VLFRRGA-PVATWVGASPRRVLEERLRPYLEG 139 (140)
T ss_dssp EE-EEEETTE-EEEEEESCCCHHHHHHHHHHHHTC
T ss_pred EE-EEEeCCc-EEEEEeCCCCHHHHHHHHHHHHcc
Confidence 99 5555443 344567889999999999998764
No 149
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.49 E-value=3.3e-14 Score=107.48 Aligned_cols=104 Identities=21% Similarity=0.479 Sum_probs=81.9
Q ss_pred eEEE-cccchHHHhhc-CCCcEEEEEECCCChhHHHHHHHH---HHHHHHhcCCCceEEEEEeCCCC-----CC-CCCCC
Q 023747 150 VQIV-VGKTFDDLVLN-SHKDVLLEVYTPWCVTCETTSKQI---EKLAKHFKGLDNLVIAKIDASAN-----EH-PKLQV 218 (278)
Q Consensus 150 v~~l-~~~~~~~~i~~-~~~~~~v~f~~~~c~~c~~~~~~~---~~~a~~~~~~~~~~~~~vd~~~~-----~~-~~~~i 218 (278)
+..+ +.+++...+.+ .+++++|.||++||++|+.+.+.+ .+++..+. ++.++.+|++.. ++ .+|++
T Consensus 13 f~~~~~~~~~~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~---~~~~~~vd~~~~~~~~~~l~~~~~v 89 (134)
T 2fwh_A 13 FTQIKTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALA---DTVLLQANVTANDAQDVALLKHLNV 89 (134)
T ss_dssp CEECCSHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTT---TSEEEEEECTTCCHHHHHHHHHTTC
T ss_pred cEEecCHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc---CcEEEEEeCCCCcchHHHHHHHcCC
Confidence 4433 44677776654 378999999999999999999999 89999886 499999999653 33 47899
Q ss_pred cCCCeEEEE-eCCCccCceEecCCCCHHHHHHHHHHHhc
Q 023747 219 EEYPTLLFY-PAGDKANPIKVSARSSSKNIAAFIKEQLK 256 (278)
Q Consensus 219 ~~~Ptl~~f-~~g~~~~~~~~~g~~~~~~l~~~i~~~~~ 256 (278)
.++|++++| ++|+.+...++.|..+.+.|.++|++.-+
T Consensus 90 ~~~Pt~~~~d~~G~~v~~~~~~G~~~~~~l~~~l~~~~~ 128 (134)
T 2fwh_A 90 LGLPTILFFDGQGQEHPQARVTGFMDAETFSAHLRDRQP 128 (134)
T ss_dssp CSSSEEEEECTTSCBCGGGCBCSCCCHHHHHHHHHHC--
T ss_pred CCCCEEEEECCCCCEeeeeeeeeccCHHHHHHHHHhcCc
Confidence 999999999 67765411378999999999999976554
No 150
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.49 E-value=1.3e-13 Score=100.55 Aligned_cols=104 Identities=13% Similarity=0.123 Sum_probs=85.7
Q ss_pred ccccCCCCceeeeeeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCce
Q 023747 19 LISNLPTTSLELLKVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNT 97 (278)
Q Consensus 19 ~v~~~~~~~~~~~~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Pt 97 (278)
++.++..++...+ .+.+++++|.||++| ++|+.+.|.|.++++.+.+.+.|+.+|++.. +.++++|+|.++ ||
T Consensus 7 v~~l~~~~~~~~~--~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~---~~~~~~~~v~~~-Pt 80 (112)
T 1t00_A 7 LKHVTDDSFEQDV--LKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDEN---PGTAAKYGVMSI-PT 80 (112)
T ss_dssp CEEECTTTHHHHT--TTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTC---HHHHHHTTCCSS-SE
T ss_pred EEecchhhHHHHH--hhCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCCeEEEEEEcCCC---HHHHHhCCCCcc-cE
Confidence 4556666654433 245788999999999 9999999999999999988899999999998 899999999999 99
Q ss_pred EEEEecCCcceeecCCCCCChHHHHHHHHHHhc
Q 023747 98 VVTAFDNKAISKFLLESDLTPSNIEEFCSRLLH 130 (278)
Q Consensus 98 l~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 130 (278)
+ .++.+|. ....+.|..+.+.+.+++++.++
T Consensus 81 ~-~~~~~G~-~~~~~~G~~~~~~l~~~l~~~l~ 111 (112)
T 1t00_A 81 L-NVYQGGE-VAKTIVGAKPKAAIVRDLEDFIA 111 (112)
T ss_dssp E-EEEETTE-EEEEEESCCCHHHHHHHTHHHHC
T ss_pred E-EEEeCCE-EEEEEeCCCCHHHHHHHHHHHhh
Confidence 9 5555443 34456789999999999998763
No 151
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.49 E-value=1.3e-13 Score=102.83 Aligned_cols=105 Identities=14% Similarity=0.058 Sum_probs=86.5
Q ss_pred cccccCCCCceeeeeeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcC-ceEEEEEeCCCcccchhHHHHcCCCCCC
Q 023747 18 TLISNLPTTSLELLKVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKG-KIMFTAVDIADEDLAKPFLTLFGLEESK 95 (278)
Q Consensus 18 ~~v~~~~~~~~~~~~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~-~v~f~~vd~~~~~~~~~l~~~~~i~~~~ 95 (278)
.++.++..++.... +. .++|.||++| ++|+.+.|.|.++++.+++ .+.|+.||++.+ ..++++|+|.++
T Consensus 8 ~v~~l~~~~f~~~~---~~--~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~---~~~~~~~~v~~~- 78 (126)
T 1x5e_A 8 NVRVITDENWRELL---EG--DWMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQ---PGLSGRFIINAL- 78 (126)
T ss_dssp SEEECCTTTHHHHT---SS--EEEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTC---HHHHHHTTCCSS-
T ss_pred ccEEecHHHHHHHh---CC--CEEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCC---HHHHHHcCCccc-
Confidence 46677777776533 22 3899999999 9999999999999999986 699999999999 899999999999
Q ss_pred ceEEEEecCCcceeecCCCCCChHHHHHHHHHHhcCccc
Q 023747 96 NTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHGTLT 134 (278)
Q Consensus 96 Ptl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~~~~ 134 (278)
||+ .++..|. ...+.|..+.+++.+|+++.+...+.
T Consensus 79 Pt~-~~~~~G~--~~~~~G~~~~~~l~~~l~~~~~~~~~ 114 (126)
T 1x5e_A 79 PTI-YHCKDGE--FRRYQGPRTKKDFINFISDKEWKSIE 114 (126)
T ss_dssp SEE-EEEETTE--EEECCSCCCHHHHHHHHHTCGGGGSC
T ss_pred CEE-EEEeCCe--EEEeecCCCHHHHHHHHHHHhhccCC
Confidence 999 5555553 35568999999999999988754433
No 152
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.48 E-value=1.9e-13 Score=100.99 Aligned_cols=103 Identities=11% Similarity=0.126 Sum_probs=84.6
Q ss_pred cccccCCCCceeeeeeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcC-----ceEEEEEeCCCcccchhHHHHcCC
Q 023747 18 TLISNLPTTSLELLKVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKG-----KIMFTAVDIADEDLAKPFLTLFGL 91 (278)
Q Consensus 18 ~~v~~~~~~~~~~~~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~-----~v~f~~vd~~~~~~~~~l~~~~~i 91 (278)
.++.++..++...+ ...+++++|+||++| ++|+.+.|.|+++++++++ .+.|+.+|++.+ + +++ +|
T Consensus 8 ~v~~l~~~~f~~~v--~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~---~-~~~--~v 79 (121)
T 2djj_A 8 PVTVVVAKNYNEIV--LDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAN---D-VPD--EI 79 (121)
T ss_dssp SSEECCTTTTTTSS--SCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTS---C-CSS--CC
T ss_pred CeEEecccCHHHHh--hcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECccc---c-ccc--cc
Confidence 46667777776654 246789999999999 9999999999999999987 799999999987 3 665 99
Q ss_pred CCCCceEEEEecCCcc-eeecCCCCCChHHHHHHHHHHhc
Q 023747 92 EESKNTVVTAFDNKAI-SKFLLESDLTPSNIEEFCSRLLH 130 (278)
Q Consensus 92 ~~~~Ptl~~~~~~~~~-~~~~~~g~~~~~~i~~fi~~~~~ 130 (278)
.++ ||+ .+++.++. ....+.|..+.++|.+|+++.+.
T Consensus 80 ~~~-Pt~-~~~~~~~~~~~~~~~G~~~~~~l~~~i~~~~~ 117 (121)
T 2djj_A 80 QGF-PTI-KLYPAGAKGQPVTYSGSRTVEDLIKFIAENGK 117 (121)
T ss_dssp SSS-SEE-EEECSSCTTSCCCCCCCSCHHHHHHHHHHTSS
T ss_pred CcC-CeE-EEEeCcCCCCceEecCCCCHHHHHHHHHhccC
Confidence 999 999 66665533 24566899999999999998764
No 153
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.48 E-value=1e-13 Score=100.11 Aligned_cols=102 Identities=12% Similarity=0.147 Sum_probs=83.2
Q ss_pred cccCCCCceeeeeeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCceE
Q 023747 20 ISNLPTTSLELLKVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTV 98 (278)
Q Consensus 20 v~~~~~~~~~~~~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Ptl 98 (278)
+.++..++...+ .+.+++++|.||++| ++|+.+.|.+.++++.+++.+.|+.+|++.. +.++++|||.++ ||+
T Consensus 4 ~~l~~~~~~~~~--~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~---~~~~~~~~v~~~-Pt~ 77 (107)
T 1dby_A 4 GAVNDDTFKNVV--LESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDES---PNVASEYGIRSI-PTI 77 (107)
T ss_dssp EEECHHHHHHHT--TTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTC---HHHHHHHTCCSS-CEE
T ss_pred EeccHHHHHHHH--hcCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCceEEEEEECCCC---HHHHHHCCCCcC-CEE
Confidence 344444444322 235788999999999 9999999999999999998899999999998 899999999999 999
Q ss_pred EEEecCCcceeecCCCCCChHHHHHHHHHHh
Q 023747 99 VTAFDNKAISKFLLESDLTPSNIEEFCSRLL 129 (278)
Q Consensus 99 ~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 129 (278)
.++.+|. ....+.|..+.+++.+++++++
T Consensus 78 -~~~~~G~-~~~~~~G~~~~~~l~~~l~~~l 106 (107)
T 1dby_A 78 -MVFKGGK-KCETIIGAVPKATIVQTVEKYL 106 (107)
T ss_dssp -EEESSSS-EEEEEESCCCHHHHHHHHHHHC
T ss_pred -EEEeCCE-EEEEEeCCCCHHHHHHHHHHHh
Confidence 5665443 3445578899999999998865
No 154
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.48 E-value=8.5e-14 Score=102.51 Aligned_cols=92 Identities=14% Similarity=0.148 Sum_probs=77.8
Q ss_pred eeeeeee--cCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCceEEEEecCC
Q 023747 29 ELLKVSQ--IDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFDNK 105 (278)
Q Consensus 29 ~~~~~~~--~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Ptl~~~~~~~ 105 (278)
.+...++ .+++++|.||++| ++|+.+.|.|+++++++++ +.|+.||++.. +.++++|+|.++ ||+ .++.+|
T Consensus 21 ~f~~~l~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-v~~~~vd~d~~---~~l~~~~~v~~~-Pt~-~~~~~G 94 (116)
T 3qfa_C 21 AFQEALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN-VIFLEVDVDDC---QDVASECEVKSM-PTF-QFFKKG 94 (116)
T ss_dssp HHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT-SEEEEEETTTT---HHHHHHTTCCSS-SEE-EEESSS
T ss_pred HHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCCC---HHHHHHcCCccc-cEE-EEEeCC
Confidence 3334444 6889999999999 9999999999999999988 99999999999 999999999999 999 555544
Q ss_pred cceeecCCCCCChHHHHHHHHHH
Q 023747 106 AISKFLLESDLTPSNIEEFCSRL 128 (278)
Q Consensus 106 ~~~~~~~~g~~~~~~i~~fi~~~ 128 (278)
. ....+.|. +.+.|.++++++
T Consensus 95 ~-~~~~~~G~-~~~~l~~~l~~~ 115 (116)
T 3qfa_C 95 Q-KVGEFSGA-NKEKLEATINEL 115 (116)
T ss_dssp S-EEEEEESC-CHHHHHHHHHHH
T ss_pred e-EEEEEcCC-CHHHHHHHHHHh
Confidence 3 33445777 999999999875
No 155
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.48 E-value=1.1e-13 Score=99.93 Aligned_cols=103 Identities=17% Similarity=0.191 Sum_probs=85.4
Q ss_pred ccccCCCCceeeeeeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCce
Q 023747 19 LISNLPTTSLELLKVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNT 97 (278)
Q Consensus 19 ~v~~~~~~~~~~~~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Pt 97 (278)
++.++..++.. ..+.+++++|+||++| ++|+.+.|.+.++++.+.+++.|+.+|++.+ +.++++|+|.++ ||
T Consensus 3 v~~l~~~~~~~---~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~---~~~~~~~~v~~~-Pt 75 (109)
T 2yzu_A 3 PIEVTDQNFDE---TLGQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEGKLLVAKLDVDEN---PKTAMRYRVMSI-PT 75 (109)
T ss_dssp CEECCTTTHHH---HHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTC---HHHHHHTTCCSS-SE
T ss_pred ceEccHhHHHH---HhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCceEEEEEECCCC---HhHHHhCCCCcC-CE
Confidence 45566666653 3456789999999999 9999999999999999998899999999998 899999999999 99
Q ss_pred EEEEecCCcceeecCCCCCChHHHHHHHHHHhc
Q 023747 98 VVTAFDNKAISKFLLESDLTPSNIEEFCSRLLH 130 (278)
Q Consensus 98 l~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 130 (278)
+ .++.+|. ....+.|..+.+++.+|+++.+.
T Consensus 76 ~-~~~~~g~-~~~~~~g~~~~~~l~~~l~~~l~ 106 (109)
T 2yzu_A 76 V-ILFKDGQ-PVEVLVGAQPKRNYQAKIEKHLP 106 (109)
T ss_dssp E-EEEETTE-EEEEEESCCCHHHHHHHHHTTC-
T ss_pred E-EEEeCCc-EeeeEeCCCCHHHHHHHHHHHhh
Confidence 9 5555443 34456788999999999998763
No 156
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.47 E-value=1.3e-13 Score=108.72 Aligned_cols=101 Identities=17% Similarity=0.244 Sum_probs=79.4
Q ss_pred EEcccchHHHhh---cCCCcEEEEEECCCChhHHHHHHHH---HHHHHHhcCCCceEEEEEeCCCCC-C-----------
Q 023747 152 IVVGKTFDDLVL---NSHKDVLLEVYTPWCVTCETTSKQI---EKLAKHFKGLDNLVIAKIDASANE-H----------- 213 (278)
Q Consensus 152 ~l~~~~~~~~i~---~~~~~~~v~f~~~~c~~c~~~~~~~---~~~a~~~~~~~~~~~~~vd~~~~~-~----------- 213 (278)
..+..+|++.+. ..+++++|.|||+||++|+.+.+.+ .++.+.++. ++.++.||++... +
T Consensus 30 ~~~~~~~~~~~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~--~~~~v~v~~d~~~~~~~~~~~~~~~~ 107 (172)
T 3f9u_A 30 HAKFDDYDLGMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINN--DYVLITLYVDNKTPLTEPVKIMENGT 107 (172)
T ss_dssp CCCBSCHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHH--HCEEEEEETTCCCEEEEEEEEEETTE
T ss_pred ccchhhHHHHHHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC--CEEEEEEecCcccccchhhhhhhcch
Confidence 345677777664 5589999999999999999975444 566666654 6999999998773 2
Q ss_pred ----------------CCCCCcCCCeEEEE-eCCCccCceEecCCCC-HHHHHHHHHHHhc
Q 023747 214 ----------------PKLQVEEYPTLLFY-PAGDKANPIKVSARSS-SKNIAAFIKEQLK 256 (278)
Q Consensus 214 ----------------~~~~i~~~Ptl~~f-~~g~~~~~~~~~g~~~-~~~l~~~i~~~~~ 256 (278)
.+|++.++|+++++ ++|+.+. ++.|..+ .+.+.+||.+.+.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~v~~~Pt~~lid~~G~~~~--~~~G~~~~~~~l~~~l~~~l~ 166 (172)
T 3f9u_A 108 ERTLRTVGDKWSYLQRVKFGANAQPFYVLIDNEGNPLN--KSYAYDEDISKYINFLQTGLE 166 (172)
T ss_dssp EEEEEEHHHHHHHHHHHHHSCCCSSEEEEECTTSCBSS--CCBCSCCCHHHHHHHHHHHHH
T ss_pred hhhhhhhhhhhhHHHHHHcCCCCcceEEEECCCCCEEe--eccCCCCCHHHHHHHHHHHHH
Confidence 35789999999999 6676654 6779888 9999999998775
No 157
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.47 E-value=2.4e-13 Score=97.66 Aligned_cols=101 Identities=16% Similarity=0.199 Sum_probs=82.6
Q ss_pred cccCCCCceeeeeeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCceE
Q 023747 20 ISNLPTTSLELLKVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTV 98 (278)
Q Consensus 20 v~~~~~~~~~~~~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Ptl 98 (278)
+.++..++...+. ..+++++++||++| ++|+.+.|.+.++++++++.+.|+.+|++.. +.++++|+|.++ ||+
T Consensus 3 ~~~~~~~~~~~~~--~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~~~~~v~~~-Pt~ 76 (105)
T 1fb6_A 3 QDVNDSSWKEFVL--ESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEA---PGIATQYNIRSI-PTV 76 (105)
T ss_dssp EECCTTTHHHHTT--TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTC---HHHHHHTTCCSS-SEE
T ss_pred eechhhhHHHHHh--cCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcCceEEEEEcCcch---HHHHHhCCCCcc-cEE
Confidence 3445555544332 35678999999999 9999999999999999998899999999998 899999999999 999
Q ss_pred EEEecCCcceeecCCCCCChHHHHHHHHHH
Q 023747 99 VTAFDNKAISKFLLESDLTPSNIEEFCSRL 128 (278)
Q Consensus 99 ~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~ 128 (278)
.++.+|. ....+.|..+.+.+.++++++
T Consensus 77 -~~~~~g~-~~~~~~G~~~~~~l~~~l~~~ 104 (105)
T 1fb6_A 77 -LFFKNGE-RKESIIGAVPKSTLTDSIEKY 104 (105)
T ss_dssp -EEEETTE-EEEEEEECCCHHHHHHHHHHH
T ss_pred -EEEeCCe-EEEEEecCCCHHHHHHHHHhh
Confidence 5555443 344457889999999999875
No 158
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.47 E-value=8.5e-14 Score=100.55 Aligned_cols=97 Identities=12% Similarity=0.149 Sum_probs=79.6
Q ss_pred CeEEEcc-cchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-C----C-CCCCCc-C
Q 023747 149 NVQIVVG-KTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-E----H-PKLQVE-E 220 (278)
Q Consensus 149 ~v~~l~~-~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~----~-~~~~i~-~ 220 (278)
....++. ++|++++.. +++++|+|+|+||++|+.+.|.+++++.. . ++.|+++|++++ + + .+++|. .
T Consensus 7 ~~~~i~s~e~f~~ii~~-~~~vvi~khatwCgpc~~~~~~~e~~~~~--~--~v~~~~vdVde~r~~Sn~IA~~~~V~h~ 81 (112)
T 3iv4_A 7 VAIKLSSIDQFEQVIEE-NKYVFVLKHSETCPISANAYDQFNKFLYE--R--DMDGYYLIVQQERDLSDYIAKKTNVKHE 81 (112)
T ss_dssp CEEECCSHHHHHHHHHH-CSEEEEEEECTTCHHHHHHHHHHHHHHHH--H--TCCEEEEEGGGGHHHHHHHHHHHTCCCC
T ss_pred ceeecCCHHHHHHHHhc-CCCEEEEEECCcCHhHHHHHHHHHHHhcc--C--CceEEEEEeecCchhhHHHHHHhCCccC
Confidence 4566644 778887754 89999999999999999999999999985 2 699999999988 5 4 488999 5
Q ss_pred CCeEEEEeCCCccCceEecCCCCHHHHHHHH
Q 023747 221 YPTLLFYPAGDKANPIKVSARSSSKNIAAFI 251 (278)
Q Consensus 221 ~Ptl~~f~~g~~~~~~~~~g~~~~~~l~~~i 251 (278)
.|++++|++|+.+- -.-.+.++.+.|.+.+
T Consensus 82 sPq~il~k~G~~v~-~~SH~~I~~~~l~~~~ 111 (112)
T 3iv4_A 82 SPQAFYFVNGEMVW-NRDHGDINVSSLAQAE 111 (112)
T ss_dssp SSEEEEEETTEEEE-EEEGGGCSHHHHHHHT
T ss_pred CCeEEEEECCEEEE-EeeccccCHHHHHHhh
Confidence 99999999998762 2456788988877654
No 159
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=99.46 E-value=2.6e-12 Score=107.58 Aligned_cols=192 Identities=14% Similarity=0.184 Sum_probs=144.6
Q ss_pred eeeecCCceEEEEEeCccchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCceEEEEecCC------
Q 023747 32 KVSQIDTLDMVYVFAKADDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFDNK------ 105 (278)
Q Consensus 32 ~~~~~~~~~~v~F~~~~~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Ptl~~~~~~~------ 105 (278)
.......+++|.||.++ |....+.|.++|..+++.+.|+.+. . ..++++|++.+ |+| .+|..+
T Consensus 19 ~~l~~~~v~vvgff~~~--~~~~~~~f~~~A~~lr~~~~F~~~~---~---~~v~~~~~~~~--p~i-~~fk~~~~~~kf 87 (252)
T 2h8l_A 19 KFISDKDASIVGFFDDS--FSEAHSEFLKAASNLRDNYRFAHTN---V---ESLVNEYDDNG--EGI-ILFRPSHLTNKF 87 (252)
T ss_dssp HHHTSSSCEEEEEESCT--TSHHHHHHHHHHHHTTTTSCEEEEC---C---HHHHHHHCSSS--EEE-EEECCGGGCCTT
T ss_pred HHhhcCCeEEEEEECCC--CChHHHHHHHHHHhcccCcEEEEEC---h---HHHHHHhCCCC--CcE-EEEcchhhcccc
Confidence 34456678899999987 6678899999999999889998873 4 57999999984 998 555432
Q ss_pred cceeecC-CCCCChHHHHHHHHHHhcCcccccccCCCCCCCCCCCeEEEcccchHHHhhcCCCcEEEEEECCCCh---h-
Q 023747 106 AISKFLL-ESDLTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCV---T- 180 (278)
Q Consensus 106 ~~~~~~~-~g~~~~~~i~~fi~~~~~~~~~~~~~s~~~p~~~~~~v~~l~~~~~~~~i~~~~~~~~v~f~~~~c~---~- 180 (278)
......| .|..+.++|.+|+.... -..|..+|.+++..+ .+.+++|.|+...+. .
T Consensus 88 ~e~~~~y~~g~~~~~~l~~fi~~~~-----------------~Plv~e~t~~n~~~~---~~~~~~v~~~~~~~~~~~~~ 147 (252)
T 2h8l_A 88 EDKTVAYTEQKMTSGKIKKFIQENI-----------------FGICPHMTEDNKDLI---QGKDLLIAYYDVDYEKNAKG 147 (252)
T ss_dssp SCSEEECCCSSCCHHHHHHHHHHHS-----------------SCSSCEECTTTHHHH---SSSSEEEEEECCBTTTBHHH
T ss_pred cccccccCCCCcCHHHHHHHHHhcc-----------------cCCeeecccccHhhh---cCCCeEEEEeecchhhcchh
Confidence 1235567 88899999999999864 124889999999885 355677777764331 2
Q ss_pred HHHHHHHHHHHHHHhcCC-CceEEEEEeCCCC-CC-CCCCC----cCCCeEEEEeCCCccCceEecCCCCHHH--HHHHH
Q 023747 181 CETTSKQIEKLAKHFKGL-DNLVIAKIDASAN-EH-PKLQV----EEYPTLLFYPAGDKANPIKVSARSSSKN--IAAFI 251 (278)
Q Consensus 181 c~~~~~~~~~~a~~~~~~-~~~~~~~vd~~~~-~~-~~~~i----~~~Ptl~~f~~g~~~~~~~~~g~~~~~~--l~~~i 251 (278)
...+...+.++|+.+++. ..+.|+.+|++.. .. ..+++ ..+|++.++...+. .+.+.+..+.++ |.+|+
T Consensus 148 ~~~~~~~~~~vA~~~~~k~~~~~F~~~d~~~~~~~~~~fgl~~~~~~~P~v~i~~~~~~--ky~~~~~~t~~~~~i~~F~ 225 (252)
T 2h8l_A 148 SNYWRNRVMMVAKKFLDAGHKLNFAVASRKTFSHELSDFGLESTAGEIPVVAIRTAKGE--KFVMQEEFSRDGKALERFL 225 (252)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCEEEEEETTTTHHHHGGGTCCCCSCSSCEEEEECTTSC--EEECCSCCCTTSHHHHHHH
T ss_pred HHHHHHHHHHHHHHccccCceEEEEEEchHHHHHHHHHcCCCCccCCCCEEEEEeCcCc--EecCCcccCcchHHHHHHH
Confidence 225778899999999862 1399999999876 33 46677 46899999864322 345667888888 99999
Q ss_pred HHHhc
Q 023747 252 KEQLK 256 (278)
Q Consensus 252 ~~~~~ 256 (278)
.+.+.
T Consensus 226 ~~~~~ 230 (252)
T 2h8l_A 226 QDYFD 230 (252)
T ss_dssp HHHHH
T ss_pred HHHHC
Confidence 99884
No 160
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.46 E-value=6.1e-13 Score=99.14 Aligned_cols=95 Identities=9% Similarity=0.068 Sum_probs=81.1
Q ss_pred eeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEe--CCCcccchhHHHHcCCCCCCceEEEEecCCcce
Q 023747 32 KVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVD--IADEDLAKPFLTLFGLEESKNTVVTAFDNKAIS 108 (278)
Q Consensus 32 ~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd--~~~~~~~~~l~~~~~i~~~~Ptl~~~~~~~~~~ 108 (278)
.....+++++|.||++| ++|+.+.|.+.++++.+++.+.|+.|| ++.. ..++++|+|.++ ||+ .+++.++..
T Consensus 21 ~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~d~~---~~~~~~~~v~~~-Pt~-~~~~~~G~~ 95 (126)
T 2l57_A 21 EEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREGKFNIYYARLEEEKN---IDLAYKYDANIV-PTT-VFLDKEGNK 95 (126)
T ss_dssp TTCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSSSCEEEEEETTSSHH---HHHHHHTTCCSS-SEE-EEECTTCCE
T ss_pred HHHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcCCeEEEEEeCCCCch---HHHHHHcCCcce-eEE-EEECCCCCE
Confidence 34456789999999999 999999999999999998779999999 8877 899999999999 999 777733334
Q ss_pred eecCCCCCChHHHHHHHHHHhcC
Q 023747 109 KFLLESDLTPSNIEEFCSRLLHG 131 (278)
Q Consensus 109 ~~~~~g~~~~~~i~~fi~~~~~~ 131 (278)
...+.|..+.+++.+++++.+..
T Consensus 96 ~~~~~G~~~~~~l~~~l~~~~~~ 118 (126)
T 2l57_A 96 FYVHQGLMRKNNIETILNSLGVK 118 (126)
T ss_dssp EEEEESCCCHHHHHHHHHHHCCC
T ss_pred EEEecCCCCHHHHHHHHHHHhcc
Confidence 45568899999999999998643
No 161
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.45 E-value=5.3e-13 Score=103.18 Aligned_cols=109 Identities=12% Similarity=0.122 Sum_probs=80.2
Q ss_pred CCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCceEEEEecCCcceeecCCCC
Q 023747 37 DTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFDNKAISKFLLESD 115 (278)
Q Consensus 37 ~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Ptl~~~~~~~~~~~~~~~g~ 115 (278)
+++++|.||++| ++|+.+.|.|.++++.+.+ +.|+.||++.. +.++++|+|.++ ||+ .++++|. ....+.|
T Consensus 32 ~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~-v~~~~vd~~~~---~~l~~~~~v~~~-Pt~-~~~~~G~-~~~~~~G- 103 (153)
T 2wz9_A 32 KSLLVVHFWAPWAPQCAQMNEVMAELAKELPQ-VSFVKLEAEGV---PEVSEKYEISSV-PTF-LFFKNSQ-KIDRLDG- 103 (153)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTS---HHHHHHTTCCSS-SEE-EEEETTE-EEEEEES-
T ss_pred CCeEEEEEECCCCHhHHHHHHHHHHHHHHcCC-eEEEEEECCCC---HHHHHHcCCCCC-CEE-EEEECCE-EEEEEeC-
Confidence 789999999999 9999999999999999864 99999999998 899999999999 999 6666443 3333456
Q ss_pred CChHHHHHHHHHHhcCcccccccCCCCCCCCCCCeEEEcccchHHHhh
Q 023747 116 LTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIVVGKTFDDLVL 163 (278)
Q Consensus 116 ~~~~~i~~fi~~~~~~~~~~~~~s~~~p~~~~~~v~~l~~~~~~~~i~ 163 (278)
.+.+++.+|+++.+..... ..+..+..++..+|+.+..
T Consensus 104 ~~~~~l~~~i~~~l~~~~~----------~~~~~~~~l~~~~f~~~~~ 141 (153)
T 2wz9_A 104 AHAPELTKKVQRHASSGSF----------LPSAKVKVDTDPNSSSVDK 141 (153)
T ss_dssp SCHHHHHHHHHHHSCTTSS----------CSCCCCCCC----------
T ss_pred CCHHHHHHHHHHHhccccC----------CCccccccCCCCChhhHHH
Confidence 5788999999998754321 1344577788888888663
No 162
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.45 E-value=2.8e-13 Score=101.48 Aligned_cols=92 Identities=14% Similarity=0.248 Sum_probs=79.1
Q ss_pred eeeeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCceEEEEecCCcce
Q 023747 30 LLKVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFDNKAIS 108 (278)
Q Consensus 30 ~~~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Ptl~~~~~~~~~~ 108 (278)
+......+++++|.||++| ++|+.+.|.++++++++++.+.|+.||++.. +.++++|+|.++ ||+ .++..|. .
T Consensus 35 ~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~vd~d~~---~~l~~~~~v~~~-Pt~-~~~~~G~-~ 108 (128)
T 3ul3_B 35 INGVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGKRIYLLKVDLDKN---ESLARKFSVKSL-PTI-ILLKNKT-M 108 (128)
T ss_dssp SSBTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGEEEEEEEGGGC---HHHHHHTTCCSS-SEE-EEEETTE-E
T ss_pred HHHHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCC---HHHHHHcCCCCc-CEE-EEEECCE-E
Confidence 4444567789999999999 9999999999999999998899999999999 899999999999 999 5555443 3
Q ss_pred eecCCCCCChHHHHHHHHH
Q 023747 109 KFLLESDLTPSNIEEFCSR 127 (278)
Q Consensus 109 ~~~~~g~~~~~~i~~fi~~ 127 (278)
...+.|..+.+++.+|+++
T Consensus 109 ~~~~~G~~~~~~l~~~l~~ 127 (128)
T 3ul3_B 109 LARKDHFVSSNDLIALIKK 127 (128)
T ss_dssp EEEESSCCCHHHHHHHHTT
T ss_pred EEEecCCCCHHHHHHHHHh
Confidence 4456889999999999864
No 163
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.45 E-value=3.1e-13 Score=110.11 Aligned_cols=105 Identities=13% Similarity=0.209 Sum_probs=87.0
Q ss_pred ccccCCCCceeeeeeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCce
Q 023747 19 LISNLPTTSLELLKVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNT 97 (278)
Q Consensus 19 ~v~~~~~~~~~~~~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Pt 97 (278)
++.++..++...+ ..+++++|.||++| ++|+.+.|.|.++++.+++.+.|+.|||+.. +.+|++|+|.++ ||
T Consensus 99 v~~l~~~~f~~~~---~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~v~~~~vd~~~~---~~l~~~~~v~~~-Pt 171 (210)
T 3apq_A 99 IITLERREFDAAV---NSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDGLLRIGAVNCGDD---RMLCRMKGVNSY-PS 171 (210)
T ss_dssp SEECCHHHHHHHH---HHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTC---HHHHHHTTCCSS-SE
T ss_pred eEEecHHHHHHHH---ccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcCceEEEEEECCcc---HHHHHHcCCCcC-Ce
Confidence 4445444444433 56789999999999 9999999999999999998999999999999 899999999999 99
Q ss_pred EEEEecCCcceeecCCCCCChHHHHHHHHHHhcCc
Q 023747 98 VVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHGT 132 (278)
Q Consensus 98 l~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~~ 132 (278)
+ .++..|. ....+.|..+.++|.+|+.+.+...
T Consensus 172 ~-~~~~~G~-~~~~~~G~~~~~~l~~~i~~~l~~~ 204 (210)
T 3apq_A 172 L-FIFRSGM-AAVKYNGDRSKESLVAFAMQHVRST 204 (210)
T ss_dssp E-EEECTTS-CCEECCSCCCHHHHHHHHHHHHHCC
T ss_pred E-EEEECCC-ceeEecCCCCHHHHHHHHHHhCccc
Confidence 9 5555443 3455689999999999999988543
No 164
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.45 E-value=2e-13 Score=100.82 Aligned_cols=104 Identities=13% Similarity=0.056 Sum_probs=85.7
Q ss_pred cccccCCCCceeeeeeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCc
Q 023747 18 TLISNLPTTSLELLKVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKN 96 (278)
Q Consensus 18 ~~v~~~~~~~~~~~~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~P 96 (278)
.++.++..++...+ ...+++++|+||++| ++|+.+.|.|.++++.+++.+.|+.+|++.. +.++++|+|.++ |
T Consensus 13 ~v~~l~~~~~~~~~--~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~~~~~i~~~-P 86 (121)
T 2i1u_A 13 ATIKVTDASFATDV--LSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTN---PETARNFQVVSI-P 86 (121)
T ss_dssp CSEECCTTTHHHHT--TTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTC---HHHHHHTTCCSS-S
T ss_pred cceecCHHHHHHHH--HhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEECCCC---HHHHHhcCCCcC-C
Confidence 45667666665433 245778999999999 9999999999999999988899999999998 899999999999 9
Q ss_pred eEEEEecCCcceeecCCCCCChHHHHHHHHHHh
Q 023747 97 TVVTAFDNKAISKFLLESDLTPSNIEEFCSRLL 129 (278)
Q Consensus 97 tl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 129 (278)
|+ .++..|. ....+.|..+.+.+.+|+++.+
T Consensus 87 t~-~~~~~g~-~~~~~~G~~~~~~l~~~l~~~l 117 (121)
T 2i1u_A 87 TL-ILFKDGQ-PVKRIVGAKGKAALLRELSDVV 117 (121)
T ss_dssp EE-EEEETTE-EEEEEESCCCHHHHHHHTCSCC
T ss_pred EE-EEEECCE-EEEEecCCCCHHHHHHHHHHHH
Confidence 99 5565443 3445688899999999988765
No 165
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.44 E-value=2.5e-13 Score=97.62 Aligned_cols=85 Identities=15% Similarity=0.153 Sum_probs=74.3
Q ss_pred cCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCceEEEEecCCcceeecCCC
Q 023747 36 IDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFDNKAISKFLLES 114 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Ptl~~~~~~~~~~~~~~~g 114 (278)
.++++++.||++| ++|+.+.|.+.++++++++ +.|+.+|++.. +.++++|+|.++ ||+ .++.+|. ....+.|
T Consensus 19 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~vd~~~~---~~~~~~~~v~~~-Pt~-~~~~~g~-~~~~~~g 91 (105)
T 3m9j_A 19 GDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN-VIFLEVDVDDC---QDVASESEVKSM-PTF-QFFKKGQ-KVGEFSG 91 (105)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT-SEEEEEETTTC---HHHHHHTTCCBS-SEE-EEEETTE-EEEEEES
T ss_pred CCCeEEEEEECCCChhhHHHHHHHHHHHHHccC-eEEEEEEhhhh---HHHHHHcCCCcC-cEE-EEEECCe-EEEEEeC
Confidence 5789999999999 9999999999999999988 99999999999 999999999999 999 5555443 3334577
Q ss_pred CCChHHHHHHHHHH
Q 023747 115 DLTPSNIEEFCSRL 128 (278)
Q Consensus 115 ~~~~~~i~~fi~~~ 128 (278)
. +.+++.+++++.
T Consensus 92 ~-~~~~l~~~l~~~ 104 (105)
T 3m9j_A 92 A-NKEKLEATINEL 104 (105)
T ss_dssp S-CHHHHHHHHHHH
T ss_pred C-CHHHHHHHHHHh
Confidence 7 999999999875
No 166
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.44 E-value=3e-13 Score=98.35 Aligned_cols=94 Identities=15% Similarity=0.135 Sum_probs=78.5
Q ss_pred ceeeeeeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCceEEEEecCC
Q 023747 27 SLELLKVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFDNK 105 (278)
Q Consensus 27 ~~~~~~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Ptl~~~~~~~ 105 (278)
...+....+.+++++|.||++| ++|+.+.|.|.++++++.+ +.|+.||++.. +.++++|+|.++ ||+ .++++|
T Consensus 14 ~~~f~~~~~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~-~~~~~vd~~~~---~~l~~~~~v~~~-Pt~-~~~~~G 87 (109)
T 3f3q_A 14 ASEFDSAIAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQ-ADFYKLDVDEL---GDVAQKNEVSAM-PTL-LLFKNG 87 (109)
T ss_dssp HHHHHHHTTSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTC---HHHHHHTTCCSS-SEE-EEEETT
T ss_pred HHHHHHHHhcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCC-CEEEEEECCCC---HHHHHHcCCCcc-CEE-EEEECC
Confidence 3445556667899999999999 9999999999999999987 99999999999 899999999999 999 556544
Q ss_pred cceeecCCCCCChHHHHHHHHHH
Q 023747 106 AISKFLLESDLTPSNIEEFCSRL 128 (278)
Q Consensus 106 ~~~~~~~~g~~~~~~i~~fi~~~ 128 (278)
. ....+.|. +.++|.+++++.
T Consensus 88 ~-~~~~~~G~-~~~~l~~~i~~~ 108 (109)
T 3f3q_A 88 K-EVAKVVGA-NPAAIKQAIAAN 108 (109)
T ss_dssp E-EEEEEESS-CHHHHHHHHHHH
T ss_pred E-EEEEEeCC-CHHHHHHHHHhh
Confidence 3 33344666 779999999875
No 167
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=99.44 E-value=6.2e-13 Score=102.08 Aligned_cols=112 Identities=30% Similarity=0.546 Sum_probs=91.2
Q ss_pred eeeeecCCceEEEEEeC-c-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCC--CCceEEEEecC-C
Q 023747 31 LKVSQIDTLDMVYVFAK-A-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEE--SKNTVVTAFDN-K 105 (278)
Q Consensus 31 ~~~~~~~~~~~v~F~~~-~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~--~~Ptl~~~~~~-~ 105 (278)
..++.++.+..++++.. . ...+.+.+.+.++|++|+|++.|+.+|.+...+ ..+.+.||+++ . |++ ++++. +
T Consensus 25 ~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkgki~Fv~vd~~~~~~-~~~l~~fGl~~~~~-P~v-~i~~~~~ 101 (147)
T 3bj5_A 25 PKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFAFIDSDHTDN-QRILEFFGLKKEEC-PAV-RLITLEE 101 (147)
T ss_dssp HHHHSSSCCEEEEEECCTTSSSHHHHHHHHHHHHHTTTTTCEEEEECTTCGGG-HHHHHHTTCCGGGC-SEE-EEEECSS
T ss_pred HHHhcCCCceEEEEEecCCcHhHHHHHHHHHHHHHHcCCceEEEEEecchHhH-HHHHHHcCCCcccC-CEE-EEEeccc
Confidence 34466666666665553 3 557889999999999999999999999843333 57899999995 6 999 88875 4
Q ss_pred cceeecCC-CCCChHHHHHHHHHHhcCcccccccCCCCCCC
Q 023747 106 AISKFLLE-SDLTPSNIEEFCSRLLHGTLTPYLKSQPIPDN 145 (278)
Q Consensus 106 ~~~~~~~~-g~~~~~~i~~fi~~~~~~~~~~~~~s~~~p~~ 145 (278)
.+.+|.+. +..+.+.|.+|++++++|+++|+++|+++|+.
T Consensus 102 ~~~Ky~~~~~~~t~~~i~~Fv~d~l~GkL~p~~KSEpiPe~ 142 (147)
T 3bj5_A 102 EMTKYKPESEELTAERITEFCHRFLEGKIKPHLMSQELPED 142 (147)
T ss_dssp SCEEECCSCCCCCHHHHHHHHHHHHTTCSCEEECCSCCCGG
T ss_pred ccccCCCCcccCCHHHHHHHHHHHHcCCccccccCCCCCCC
Confidence 55678875 77999999999999999999999999999975
No 168
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.44 E-value=2.6e-13 Score=101.33 Aligned_cols=101 Identities=14% Similarity=0.181 Sum_probs=81.8
Q ss_pred ccccCC-CCceeeeeeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCc
Q 023747 19 LISNLP-TTSLELLKVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKN 96 (278)
Q Consensus 19 ~v~~~~-~~~~~~~~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~P 96 (278)
++.+++ .++...+ +.+++++|.||++| ++|+.+.|.|.++++.+.+ +.|+.||++.. +.++++|+|.++ |
T Consensus 21 v~~l~~~~~f~~~~---~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~-v~~~~vd~d~~---~~l~~~~~v~~~-P 92 (125)
T 1r26_A 21 VVDVYSVEQFRNIM---SEDILTVAWFTAVWCGPCKTIERPMEKIAYEFPT-VKFAKVDADNN---SEIVSKCRVLQL-P 92 (125)
T ss_dssp CEEECCHHHHHHHH---HSSSCEEEEEECTTCHHHHHTHHHHHHHHHHCTT-SEEEEEETTTC---HHHHHHTTCCSS-S
T ss_pred eEECCCHHHHHHHH---ccCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCC-CEEEEEECCCC---HHHHHHcCCCcc-c
Confidence 344544 5554443 67789999999999 9999999999999999965 99999999998 899999999999 9
Q ss_pred eEEEEecCCcceeecCCCCCChHHHHHHHHHHhc
Q 023747 97 TVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLH 130 (278)
Q Consensus 97 tl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 130 (278)
|+ .++..|. ....+.| .+.++|.+++++.+.
T Consensus 93 t~-~i~~~G~-~~~~~~G-~~~~~l~~~l~~~l~ 123 (125)
T 1r26_A 93 TF-IIARSGK-MLGHVIG-ANPGMLRQKLRDIIK 123 (125)
T ss_dssp EE-EEEETTE-EEEEEES-SCHHHHHHHHHHHHH
T ss_pred EE-EEEeCCe-EEEEEeC-CCHHHHHHHHHHHhc
Confidence 99 5555443 2334467 688999999998764
No 169
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.44 E-value=1.3e-13 Score=101.44 Aligned_cols=105 Identities=16% Similarity=0.167 Sum_probs=86.0
Q ss_pred cccccCCCCceeeeeeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcC---ceEEEEEeCCCcccchhHHHHcCCCC
Q 023747 18 TLISNLPTTSLELLKVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKG---KIMFTAVDIADEDLAKPFLTLFGLEE 93 (278)
Q Consensus 18 ~~v~~~~~~~~~~~~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~---~v~f~~vd~~~~~~~~~l~~~~~i~~ 93 (278)
.++.++..++... .+.+++++|+||++| ++|+.+.|.|.++++.+++ .+.|+.+|++.. +.++++|+|.+
T Consensus 8 ~v~~l~~~~~~~~---~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~---~~~~~~~~v~~ 81 (120)
T 1mek_A 8 HVLVLRKSNFAEA---LAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEE---SDLAQQYGVRG 81 (120)
T ss_dssp TEEECCTTTHHHH---HHHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTC---CSSHHHHTCCS
T ss_pred CcEEechhhHHHH---HccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCC---HHHHHHCCCCc
Confidence 3566777776643 346789999999999 9999999999999999973 599999999998 79999999999
Q ss_pred CCceEEEEecCCcc-eeecCCCCCChHHHHHHHHHHhc
Q 023747 94 SKNTVVTAFDNKAI-SKFLLESDLTPSNIEEFCSRLLH 130 (278)
Q Consensus 94 ~~Ptl~~~~~~~~~-~~~~~~g~~~~~~i~~fi~~~~~ 130 (278)
+ ||+ .++..|.. ....+.|..+.+.+.+|+++.++
T Consensus 82 ~-Pt~-~~~~~g~~~~~~~~~g~~~~~~l~~~l~~~~~ 117 (120)
T 1mek_A 82 Y-PTI-KFFRNGDTASPKEYTAGREADDIVNWLKKRTG 117 (120)
T ss_dssp S-SEE-EEEESSCSSSCEECCCCSSHHHHHHHHHTTSC
T ss_pred c-cEE-EEEeCCCcCCcccccCccCHHHHHHHHHhccC
Confidence 9 999 55554432 12556899999999999998764
No 170
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.43 E-value=3.7e-14 Score=105.71 Aligned_cols=103 Identities=18% Similarity=0.222 Sum_probs=78.9
Q ss_pred ccccCCCCceeeeeeeecCCceEEEEEeCc-c--------------chHHHHHHHHHHHHHhcCceEEEEEeCCCcccch
Q 023747 19 LISNLPTTSLELLKVSQIDTLDMVYVFAKA-D--------------DLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAK 83 (278)
Q Consensus 19 ~v~~~~~~~~~~~~~~~~~~~~~v~F~~~~-~--------------~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~ 83 (278)
++.++.+++...+ .+.+++++|.||++| + +|+.+.|.|+++++++.+++.|+.+|++.+ +
T Consensus 5 v~~l~~~~f~~~~--~~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~~~~~~vd~d~~---~ 79 (123)
T 1oaz_A 5 IIHLTDDSFDTDV--LKADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGKLTVAKLNIDQN---P 79 (123)
T ss_dssp CEECCSTTHHHHT--TSCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC-------CEEEEEETTSC---T
T ss_pred cEecChhhHHHHH--HhCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCCeEEEEEECCCC---H
Confidence 5666677765433 456789999999999 9 999999999999999998899999999998 8
Q ss_pred hHHHHcCCCCCCceEEEEecCCcceeecCCCCCChHHHHHHHHHHh
Q 023747 84 PFLTLFGLEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLL 129 (278)
Q Consensus 84 ~l~~~~~i~~~~Ptl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 129 (278)
.++++|||.++ ||+ .++.+|. ....+.|..+.+++.+|+++.+
T Consensus 80 ~l~~~~~v~~~-Pt~-~~~~~G~-~~~~~~G~~~~~~l~~~l~~~l 122 (123)
T 1oaz_A 80 GTAPKYGIRGI-PTL-LLFKNGE-VAATKVGALSKGQLKEFLDANL 122 (123)
T ss_dssp TTGGGGTCCBS-SEE-EEEESSS-EEEEEESCCCHHHHHHHHTTTC
T ss_pred HHHHHcCCCcc-CEE-EEEECCE-EEEEEeCCCCHHHHHHHHHHHh
Confidence 99999999999 999 5555443 3344588899999999998654
No 171
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.43 E-value=5.1e-13 Score=109.79 Aligned_cols=107 Identities=19% Similarity=0.237 Sum_probs=90.2
Q ss_pred cccccCCCCceeeeeeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCc
Q 023747 18 TLISNLPTTSLELLKVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKN 96 (278)
Q Consensus 18 ~~v~~~~~~~~~~~~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~P 96 (278)
.+..++..++...+ .+.+++++|.||++| ++|+.+.|.|.++++++++.+.|+.||++.. +.++++|+|.++ |
T Consensus 13 ~~~~lt~~~f~~~v--~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~---~~l~~~~~v~~~-P 86 (222)
T 3dxb_A 13 KIIHLTDDSFDTDV--LKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQN---PGTAPKYGIRGI-P 86 (222)
T ss_dssp CCEECCTTTHHHHH--TTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTC---TTTGGGGTCCSB-S
T ss_pred CceeCCHHHHHHHH--HhcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCcEEEEEECCCC---HHHHHHcCCCcC-C
Confidence 45667777776533 446789999999999 9999999999999999999999999999999 899999999999 9
Q ss_pred eEEEEecCCcceeecCCCCCChHHHHHHHHHHhcCc
Q 023747 97 TVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHGT 132 (278)
Q Consensus 97 tl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~~ 132 (278)
|+ .++..|. ....+.|..+.+.+.+|+++.+++.
T Consensus 87 t~-~~~~~G~-~~~~~~G~~~~~~l~~~l~~~l~~~ 120 (222)
T 3dxb_A 87 TL-LLFKNGE-VAATKVGALSKGQLKEFLDANLAGS 120 (222)
T ss_dssp EE-EEEETTE-EEEEEESCCCHHHHHHHHHHHSCCS
T ss_pred EE-EEEECCe-EEEEeccccChHHHHHHHHhhcccc
Confidence 99 5555443 3345588999999999999998654
No 172
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.42 E-value=1e-12 Score=95.63 Aligned_cols=87 Identities=14% Similarity=0.198 Sum_probs=76.0
Q ss_pred CCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCceEEEEecCCcceeecCCCC
Q 023747 37 DTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFDNKAISKFLLESD 115 (278)
Q Consensus 37 ~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Ptl~~~~~~~~~~~~~~~g~ 115 (278)
+++++|.||++| ++|+.+.|.|++++..+++.+.|+.+|++.. +.++++|+|.++ ||+ .++.+|. ....+.|.
T Consensus 24 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~---~~~~~~~~v~~~-Pt~-~~~~~G~-~~~~~~G~ 97 (112)
T 1ep7_A 24 HKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAV---AAVAEAAGITAM-PTF-HVYKDGV-KADDLVGA 97 (112)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTT---HHHHHHHTCCBS-SEE-EEEETTE-EEEEEESC
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHcCCCeEEEEEECCch---HHHHHHcCCCcc-cEE-EEEECCe-EEEEEcCC
Confidence 788999999999 9999999999999999997899999999998 899999999999 999 5555443 33445777
Q ss_pred CChHHHHHHHHHHhc
Q 023747 116 LTPSNIEEFCSRLLH 130 (278)
Q Consensus 116 ~~~~~i~~fi~~~~~ 130 (278)
+.+++.+++++.++
T Consensus 98 -~~~~l~~~l~~~l~ 111 (112)
T 1ep7_A 98 -SQDKLKALVAKHAA 111 (112)
T ss_dssp -CHHHHHHHHHHHHC
T ss_pred -CHHHHHHHHHHHhc
Confidence 99999999998763
No 173
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.42 E-value=6.2e-13 Score=96.13 Aligned_cols=87 Identities=14% Similarity=0.156 Sum_probs=72.3
Q ss_pred ecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCceEEEEecCCcceeecCC
Q 023747 35 QIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFDNKAISKFLLE 113 (278)
Q Consensus 35 ~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Ptl~~~~~~~~~~~~~~~ 113 (278)
..++++++.||++| ++|+.+.|.|+++++++. .+.|+.+|++.. +.++++|+|.++ ||+ .++.+|. ....+.
T Consensus 19 ~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~-~~~~~~vd~~~~---~~~~~~~~v~~~-Pt~-~~~~~G~-~~~~~~ 91 (107)
T 1gh2_A 19 AGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYP-QAVFLEVDVHQC---QGTAATNNISAT-PTF-QFFRNKV-RIDQYQ 91 (107)
T ss_dssp TTTSCEEEEEECSSCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTS---HHHHHHTTCCSS-SEE-EEEETTE-EEEEEE
T ss_pred CCCCEEEEEEECCCChhhHHHHHHHHHHHHHCC-CcEEEEEECccC---HHHHHhcCCCcc-cEE-EEEECCe-EEEEEe
Confidence 46788999999999 999999999999999995 599999999998 899999999999 999 5555443 233346
Q ss_pred CCCChHHHHHHHHHHh
Q 023747 114 SDLTPSNIEEFCSRLL 129 (278)
Q Consensus 114 g~~~~~~i~~fi~~~~ 129 (278)
| .+.+++.+|+++.+
T Consensus 92 G-~~~~~l~~~l~~~l 106 (107)
T 1gh2_A 92 G-ADAVGLEEKIKQHL 106 (107)
T ss_dssp S-SCHHHHHHHHHHHH
T ss_pred C-CCHHHHHHHHHHhc
Confidence 6 44566999998765
No 174
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.42 E-value=3.1e-13 Score=115.21 Aligned_cols=105 Identities=18% Similarity=0.293 Sum_probs=88.4
Q ss_pred cccccCCCCceeeeeeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCc
Q 023747 18 TLISNLPTTSLELLKVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKN 96 (278)
Q Consensus 18 ~~v~~~~~~~~~~~~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~P 96 (278)
.++.++..++...+. .+.+++++|.||++| ++|+.+.|.|.++++++++++.|+.||++.+ +.++++|+|.++ |
T Consensus 8 ~v~~~~~~~f~~~~~-~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~---~~~~~~~~v~~~-P 82 (287)
T 3qou_A 8 NIVNINESNLQQVLE-QSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCDAE---QMIAAQFGLRAI-P 82 (287)
T ss_dssp TEEECCTTTHHHHHT-TTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSSSEEEEEETTTC---HHHHHTTTCCSS-S
T ss_pred ccEECCHHHHHHHHH-hcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCCeEEEEEeCccC---HHHHHHcCCCCC-C
Confidence 467788888876442 234789999999999 9999999999999999999999999999999 999999999999 9
Q ss_pred eEEEEecCCcceeecCCCCCChHHHHHHHHHHh
Q 023747 97 TVVTAFDNKAISKFLLESDLTPSNIEEFCSRLL 129 (278)
Q Consensus 97 tl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 129 (278)
|+ .++.+|. ....+.|..+.+.+.+|+...+
T Consensus 83 t~-~~~~~G~-~~~~~~g~~~~~~l~~~l~~~l 113 (287)
T 3qou_A 83 TV-YLFQNGQ-PVDGFQGPQPEEAIRALLDXVL 113 (287)
T ss_dssp EE-EEEETTE-EEEEEESCCCHHHHHHHHHHHS
T ss_pred eE-EEEECCE-EEEEeeCCCCHHHHHHHHHHHc
Confidence 99 5555443 3334578899999999999876
No 175
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.41 E-value=6.6e-13 Score=96.75 Aligned_cols=88 Identities=15% Similarity=0.191 Sum_probs=71.6
Q ss_pred cCCceEEEEEeCc-cchHHHHHHHHHHHHHhc-CceEEEEEeCCCcccchhHHHHcCCCCCCceEEEEecCCcceeecCC
Q 023747 36 IDTLDMVYVFAKA-DDLKSLLEPLEDIARNFK-GKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFDNKAISKFLLE 113 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~-~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Ptl~~~~~~~~~~~~~~~ 113 (278)
.+++++|.||++| ++|+.+.|.|.+++++++ +.+.|+.+|++.. +.++++|+|.++ ||+ .++.+|. ....+.
T Consensus 20 ~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~---~~~~~~~~v~~~-Pt~-~~~~~G~-~~~~~~ 93 (112)
T 3d6i_A 20 GDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADEN---SEISELFEISAV-PYF-IIIHKGT-ILKELS 93 (112)
T ss_dssp TTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTC---HHHHHHTTCCSS-SEE-EEEETTE-EEEEEC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccC---HHHHHHcCCCcc-cEE-EEEECCE-EEEEec
Confidence 4789999999999 999999999999999963 3499999999998 899999999999 999 5555443 333446
Q ss_pred CCCChHHHHHHHHHHhc
Q 023747 114 SDLTPSNIEEFCSRLLH 130 (278)
Q Consensus 114 g~~~~~~i~~fi~~~~~ 130 (278)
|. ..+++.+++++.+.
T Consensus 94 G~-~~~~l~~~l~~~~~ 109 (112)
T 3d6i_A 94 GA-DPKEYVSLLEDCKN 109 (112)
T ss_dssp SC-CHHHHHHHHHHHHH
T ss_pred CC-CHHHHHHHHHHHHh
Confidence 66 45679999988763
No 176
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.41 E-value=8.4e-13 Score=101.69 Aligned_cols=92 Identities=11% Similarity=0.071 Sum_probs=79.2
Q ss_pred ecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCceEEEEecCCcce-----
Q 023747 35 QIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFDNKAIS----- 108 (278)
Q Consensus 35 ~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Ptl~~~~~~~~~~----- 108 (278)
..+++++|.||++| ++|+.+.|.|+++++++++.+.|+.||+++. +.++++|+|.++ ||++ ++..|...
T Consensus 21 ~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~~~~~~vd~d~~---~~l~~~~~v~~~-Pt~~-~~~~G~~v~~~~g 95 (149)
T 3gix_A 21 TAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYLVDVDQT---AVYTQYFDISYI-PSTV-FFFNGQHMKVDYG 95 (149)
T ss_dssp CCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTTEEEEEEETTTC---CHHHHHTTCCSS-SEEE-EEETTEEEEEECS
T ss_pred cCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCcC---HHHHHHcCCCcc-CeEE-EEECCeEEEeecC
Confidence 45789999999999 9999999999999999998899999999998 899999999999 9995 66555322
Q ss_pred ---eecCCC-CCChHHHHHHHHHHhcC
Q 023747 109 ---KFLLES-DLTPSNIEEFCSRLLHG 131 (278)
Q Consensus 109 ---~~~~~g-~~~~~~i~~fi~~~~~~ 131 (278)
...+.| ..+.+++.++++.+..+
T Consensus 96 ~~~~~~~~G~~~~~~~l~~~l~~~~~~ 122 (149)
T 3gix_A 96 SPDHTKFVGSFKTKQDFIDLIEVIYRG 122 (149)
T ss_dssp SSCCSCEESCCSSHHHHHHHHHHHHHH
T ss_pred CCCCCeEeeecCCHHHHHHHHHHHHHH
Confidence 034577 78999999999998654
No 177
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=99.40 E-value=8.6e-13 Score=109.32 Aligned_cols=103 Identities=11% Similarity=0.107 Sum_probs=82.2
Q ss_pred ccccCCCCceeeeeeeecCCceEEEEEe--CccchHHHHHHHHHHHHHhc--CceEEEEEeCCC--cccchhHHHHcCCC
Q 023747 19 LISNLPTTSLELLKVSQIDTLDMVYVFA--KADDLKSLLEPLEDIARNFK--GKIMFTAVDIAD--EDLAKPFLTLFGLE 92 (278)
Q Consensus 19 ~v~~~~~~~~~~~~~~~~~~~~~v~F~~--~~~~c~~~~~~~~~la~~~~--~~v~f~~vd~~~--~~~~~~l~~~~~i~ 92 (278)
++.+++.||...+ ..+.+++|.||+ +| |. +.|.|+++|..+. +.+.|+.|||++ .+..+.+|++|+|.
T Consensus 7 v~~Lt~~nF~~~i---~~~~~vlV~FyA~~pW--Cg-l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~~V~ 80 (240)
T 2qc7_A 7 ALPLDTVTFYKVI---PKSKFVLVKFDTQYPY--GE-KQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYKLD 80 (240)
T ss_dssp CEECCTTHHHHHG---GGCSEEEEEECCSSCC--SH-HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHTTCC
T ss_pred ceECCHHHHHHHH---cCCCCEEEEEeCCCCC--Cc-chHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHcCCC
Confidence 5677787877643 567789999999 99 55 9999999999996 369999999554 11118999999999
Q ss_pred --CCCceEEEEecCCc-ceeecCCCCCChHHHHHHHHHHh
Q 023747 93 --ESKNTVVTAFDNKA-ISKFLLESDLTPSNIEEFCSRLL 129 (278)
Q Consensus 93 --~~~Ptl~~~~~~~~-~~~~~~~g~~~~~~i~~fi~~~~ 129 (278)
++ ||| .+|..|. .....|.|.++.+.|.+|+.+..
T Consensus 81 ~~~~-PTl-~~f~~G~~~~~~~y~G~~~~~~L~~fi~~~~ 118 (240)
T 2qc7_A 81 KESY-PVF-YLFRDGDFENPVPYTGAVKVGAIQRWLKGQG 118 (240)
T ss_dssp GGGC-SEE-EEEETTCSSCCEECCSCSCHHHHHHHHHHTT
T ss_pred CCCC-CEE-EEEeCCCcCcceeecCCCCHHHHHHHHHHhc
Confidence 99 999 6666554 23456689999999999999864
No 178
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.40 E-value=1.1e-12 Score=95.40 Aligned_cols=103 Identities=13% Similarity=0.140 Sum_probs=82.0
Q ss_pred cccccCCCCceeeeeeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCC-CcccchhHHHHcCCCCCC
Q 023747 18 TLISNLPTTSLELLKVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIA-DEDLAKPFLTLFGLEESK 95 (278)
Q Consensus 18 ~~v~~~~~~~~~~~~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~-~~~~~~~l~~~~~i~~~~ 95 (278)
.++.++..++...+.. ..+++++|.||++| ++|+.+.|.|.++++.+++ +.|+.+|++ .. +.++++|+|.++
T Consensus 6 ~v~~l~~~~~~~~~~~-~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~-v~~~~vd~~~~~---~~~~~~~~v~~~- 79 (111)
T 2pu9_C 6 KVTEVNKDTFWPIVKA-AGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLD-VIFLKLDCNQEN---KTLAKELGIRVV- 79 (111)
T ss_dssp SEEEECTTTHHHHHTT-CTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEECSSTT---HHHHHHHCCSBS-
T ss_pred ccEEechHHHHHHHHh-cCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCCC-eEEEEEecCcch---HHHHHHcCCCee-
Confidence 4566767666654432 14678999999999 9999999999999999987 999999998 56 899999999999
Q ss_pred ceEEEEecCCcceeecCCCCCChHHHHHHHHHHh
Q 023747 96 NTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLL 129 (278)
Q Consensus 96 Ptl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 129 (278)
||+ .++.+|. ....+.|. +.+++.+++++.+
T Consensus 80 Pt~-~~~~~G~-~~~~~~G~-~~~~l~~~l~~~~ 110 (111)
T 2pu9_C 80 PTF-KILKENS-VVGEVTGA-KYDKLLEAIQAAR 110 (111)
T ss_dssp SEE-EEESSSS-EEEEEESS-CHHHHHHHHHHHH
T ss_pred eEE-EEEeCCc-EEEEEcCC-CHHHHHHHHHHhh
Confidence 998 6665553 23334666 4889999998864
No 179
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.40 E-value=2.2e-12 Score=95.44 Aligned_cols=87 Identities=16% Similarity=0.191 Sum_probs=76.0
Q ss_pred cCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCceEEEEecCCcceeecCCC
Q 023747 36 IDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFDNKAISKFLLES 114 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Ptl~~~~~~~~~~~~~~~g 114 (278)
.+++++|.||++| ++|+.+.|.|+++++++.+ +.|+.||++.. +.++++|+|.++ ||+ .++.+|. ....+.|
T Consensus 33 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~vd~~~~---~~~~~~~~v~~~-Pt~-~~~~~G~-~~~~~~G 105 (122)
T 2vlu_A 33 AKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN-AVFLKVDVDEL---KPIAEQFSVEAM-PTF-LFMKEGD-VKDRVVG 105 (122)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTC---HHHHHHTTCCSS-SEE-EEEETTE-EEEEEES
T ss_pred cCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-cEEEEEECCCC---HHHHHHcCCCcc-cEE-EEEeCCE-EEEEEeC
Confidence 5788999999999 9999999999999999998 99999999998 899999999999 999 5555443 3344578
Q ss_pred CCChHHHHHHHHHHhc
Q 023747 115 DLTPSNIEEFCSRLLH 130 (278)
Q Consensus 115 ~~~~~~i~~fi~~~~~ 130 (278)
.. .+.+.+|+++.+.
T Consensus 106 ~~-~~~l~~~l~~~l~ 120 (122)
T 2vlu_A 106 AI-KEELTAKVGLHAA 120 (122)
T ss_dssp SC-HHHHHHHHHHHHS
T ss_pred cC-HHHHHHHHHHHhc
Confidence 78 9999999998864
No 180
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.39 E-value=2.9e-12 Score=92.05 Aligned_cols=86 Identities=13% Similarity=0.170 Sum_probs=74.4
Q ss_pred cCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCceEEEEecCCcceeecCCC
Q 023747 36 IDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFDNKAISKFLLES 114 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Ptl~~~~~~~~~~~~~~~g 114 (278)
.++++++.||++| ++|+.+.|.++++++.+++.+.|+.+|++.. +.++++|+|.++ ||+ .++.+|. ....+.|
T Consensus 19 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~---~~~~~~~~v~~~-Pt~-~~~~~G~-~~~~~~g 92 (106)
T 1xwb_A 19 SGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDEC---EDIAMEYNISSM-PTF-VFLKNGV-KVEEFAG 92 (106)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTC---HHHHHHTTCCSS-SEE-EEEETTE-EEEEEES
T ss_pred CCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCCCeEEEEEeccch---HHHHHHcCCCcc-cEE-EEEcCCc-EEEEEcC
Confidence 6788999999999 9999999999999999987799999999998 899999999999 999 5665443 3334567
Q ss_pred CCChHHHHHHHHHH
Q 023747 115 DLTPSNIEEFCSRL 128 (278)
Q Consensus 115 ~~~~~~i~~fi~~~ 128 (278)
.+.+.+.+++++.
T Consensus 93 -~~~~~l~~~i~~~ 105 (106)
T 1xwb_A 93 -ANAKRLEDVIKAN 105 (106)
T ss_dssp -CCHHHHHHHHHHT
T ss_pred -CCHHHHHHHHHHh
Confidence 7889999999874
No 181
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=99.09 E-value=3e-14 Score=106.89 Aligned_cols=91 Identities=13% Similarity=0.284 Sum_probs=76.3
Q ss_pred cCCCcEEEEEECCCChhHHHHHHHH---HHHHHHhcCCCceEEEEEeCCC--C-CC-CCCCCcCCCeEEEE--eCCCc--
Q 023747 164 NSHKDVLLEVYTPWCVTCETTSKQI---EKLAKHFKGLDNLVIAKIDASA--N-EH-PKLQVEEYPTLLFY--PAGDK-- 232 (278)
Q Consensus 164 ~~~~~~~v~f~~~~c~~c~~~~~~~---~~~a~~~~~~~~~~~~~vd~~~--~-~~-~~~~i~~~Ptl~~f--~~g~~-- 232 (278)
..+++++|+||++||++|+.+.|.+ .++++.+.. ++.++.+|++. + ++ .+|++.++|++++| ++|+.
T Consensus 17 ~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~~~G~~~~ 94 (130)
T 2lst_A 17 AHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEA--RFVVASVSVDTPEGQELARRYRVPGTPTFVFLVPKAGAWEE 94 (130)
Confidence 4578999999999999999999999 899988876 68999999853 3 45 58899999999999 45665
Q ss_pred cCceEecCCCCHHHHHHHHHHHhccc
Q 023747 233 ANPIKVSARSSSKNIAAFIKEQLKEK 258 (278)
Q Consensus 233 ~~~~~~~g~~~~~~l~~~i~~~~~~~ 258 (278)
+. ++.|..+.+.|.++|++.++..
T Consensus 95 ~~--~~~G~~~~~~l~~~l~~~~~~~ 118 (130)
T 2lst_A 95 VG--RLFGSRPRAEFLKELRQVCVKG 118 (130)
Confidence 43 6889899999999999888643
No 182
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.39 E-value=7.6e-13 Score=98.07 Aligned_cols=88 Identities=17% Similarity=0.192 Sum_probs=76.5
Q ss_pred ecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCc-eEEEEEeCCCcccchhHHHHcCCCCCCceEEEEecCCcceeecC
Q 023747 35 QIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGK-IMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFDNKAISKFLL 112 (278)
Q Consensus 35 ~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~-v~f~~vd~~~~~~~~~l~~~~~i~~~~Ptl~~~~~~~~~~~~~~ 112 (278)
+.+++++|.||++| ++|+.+.|.|.++++.+++. +.|+.+|++.. +.++++|+|.++ ||+ .++.+|. ....+
T Consensus 31 ~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~---~~~~~~~~v~~~-Pt~-~~~~~G~-~~~~~ 104 (121)
T 2j23_A 31 GGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQ---SQIAQEVGIRAM-PTF-VFFKNGQ-KIDTV 104 (121)
T ss_dssp SSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTC---HHHHHHHTCCSS-SEE-EEEETTE-EEEEE
T ss_pred cCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCC---HHHHHHcCCCcc-cEE-EEEECCe-EEeeE
Confidence 67789999999999 99999999999999999876 99999999998 899999999999 999 5555443 33445
Q ss_pred CCCCChHHHHHHHHHHh
Q 023747 113 ESDLTPSNIEEFCSRLL 129 (278)
Q Consensus 113 ~g~~~~~~i~~fi~~~~ 129 (278)
.|. +.+++.+|+++.+
T Consensus 105 ~G~-~~~~l~~~l~~~l 120 (121)
T 2j23_A 105 VGA-DPSKLQAAITQHS 120 (121)
T ss_dssp ESS-CHHHHHHHHHHHT
T ss_pred cCC-CHHHHHHHHHHhh
Confidence 777 9999999998865
No 183
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.38 E-value=1.7e-12 Score=99.13 Aligned_cols=91 Identities=16% Similarity=0.154 Sum_probs=76.2
Q ss_pred cCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCceEEEEecCCcceee----
Q 023747 36 IDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFDNKAISKF---- 110 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Ptl~~~~~~~~~~~~---- 110 (278)
.+++++|.||++| ++|+.+.|.|+++++++++.+.|+.||++++ +.++++|+|.++ ||+ .++..|.....
T Consensus 22 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~---~~~~~~~~i~~~-Pt~-~~~~~G~~v~~~~g~ 96 (142)
T 1qgv_A 22 EDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEV---PDFNKMYELYDP-CTV-MFFFRNKHIMIDLGT 96 (142)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTC---CTTTTSSCSCSS-CEE-EEEETTEEEEEECC-
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCeEEEEEccccC---HHHHHHcCCCCC-CEE-EEEECCcEEEEecCC
Confidence 4789999999999 9999999999999999988899999999998 899999999999 999 55555543321
Q ss_pred ----cCCCCC-ChHHHHHHHHHHhcC
Q 023747 111 ----LLESDL-TPSNIEEFCSRLLHG 131 (278)
Q Consensus 111 ----~~~g~~-~~~~i~~fi~~~~~~ 131 (278)
.+.|.. +.+++.+++++++.+
T Consensus 97 ~~~~~~~g~~~~~~~l~~~i~~~~~~ 122 (142)
T 1qgv_A 97 GNNNKINWAMEDKQEMVDIIETVYRG 122 (142)
T ss_dssp -----CCSCCSCHHHHHHHHHHHHHH
T ss_pred CCcceeeeecCcHHHHHHHHHHHHHH
Confidence 234555 489999999998764
No 184
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.38 E-value=7.6e-13 Score=101.03 Aligned_cols=103 Identities=7% Similarity=0.066 Sum_probs=73.3
Q ss_pred ccccCCCCceeeeeeeecCCceEEEEEeCc---cchHHHHHHHHHHHHHhcCceE--EEEEeCCCcccchhHHHHcCCCC
Q 023747 19 LISNLPTTSLELLKVSQIDTLDMVYVFAKA---DDLKSLLEPLEDIARNFKGKIM--FTAVDIADEDLAKPFLTLFGLEE 93 (278)
Q Consensus 19 ~v~~~~~~~~~~~~~~~~~~~~~v~F~~~~---~~c~~~~~~~~~la~~~~~~v~--f~~vd~~~~~~~~~l~~~~~i~~ 93 (278)
+..++.++++.++ .....++|.|++.| ++|+.+.|.|++++++| +++. |++||+++. ++++++|+|.+
T Consensus 19 ~~~l~~~~f~~~i---~~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~~v~~~~~~Vd~d~~---~~la~~~~V~~ 91 (142)
T 2es7_A 19 WQPVEASTVDDWI---KRVGDGVILLSSDPRRTPEVSDNPVMIAELLREF-PQFDWQVAVADLEQS---EAIGDRFNVRR 91 (142)
T ss_dssp CEECCCC-----------CCSEEEEECCCSCC----CCHHHHHHHHHHTC-TTSCCEEEEECHHHH---HHHHHTTTCCS
T ss_pred CcccccccHHHHH---HhCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-cccceeEEEEECCCC---HHHHHhcCCCc
Confidence 4455566666554 34455788888754 69999999999999999 7788 999999988 89999999999
Q ss_pred CCceEEEEecCCcceeecCCCCCChHHHHHHHHHHhcC
Q 023747 94 SKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHG 131 (278)
Q Consensus 94 ~~Ptl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~ 131 (278)
+ ||+ .+|.+|. ....+.|..+.++|.+|+++.+..
T Consensus 92 i-PT~-~~fk~G~-~v~~~~G~~~~~~l~~~i~~~l~~ 126 (142)
T 2es7_A 92 F-PAT-LVFTDGK-LRGALSGIHPWAELLTLMRSIVDT 126 (142)
T ss_dssp S-SEE-EEESCC-----CEESCCCHHHHHHHHHHHHC-
T ss_pred C-CeE-EEEeCCE-EEEEEeCCCCHHHHHHHHHHHhcc
Confidence 9 999 5555443 344457889999999999998753
No 185
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.37 E-value=1.3e-12 Score=97.35 Aligned_cols=86 Identities=14% Similarity=0.145 Sum_probs=73.4
Q ss_pred cCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCceEEEEecCCcceeecCCC
Q 023747 36 IDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFDNKAISKFLLES 114 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Ptl~~~~~~~~~~~~~~~g 114 (278)
.+++++|.||++| ++|+.+.|.|+++++++. .+.|+.+|++.. +.++++|+|.++ ||+ .++.+|. ....+.|
T Consensus 37 ~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~v~~~~vd~d~~---~~l~~~~~v~~~-Pt~-~~~~~G~-~~~~~~G 109 (124)
T 1xfl_A 37 SKTLVVVDFTASWCGPCRFIAPFFADLAKKLP-NVLFLKVDTDEL---KSVASDWAIQAM-PTF-MFLKEGK-ILDKVVG 109 (124)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS-SEEEEEEETTTS---HHHHHHTTCCSS-SEE-EEEETTE-EEEEEES
T ss_pred cCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-CcEEEEEECccC---HHHHHHcCCCcc-CEE-EEEECCE-EEEEEeC
Confidence 4778999999999 999999999999999998 499999999998 899999999999 999 5555443 2334466
Q ss_pred CCChHHHHHHHHHHh
Q 023747 115 DLTPSNIEEFCSRLL 129 (278)
Q Consensus 115 ~~~~~~i~~fi~~~~ 129 (278)
.+.+++.+++++.+
T Consensus 110 -~~~~~l~~~l~~~l 123 (124)
T 1xfl_A 110 -AKKDELQSTIAKHL 123 (124)
T ss_dssp -CCHHHHHHHHHHHC
T ss_pred -CCHHHHHHHHHHhc
Confidence 58999999998864
No 186
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.36 E-value=7.9e-13 Score=97.01 Aligned_cols=91 Identities=10% Similarity=0.085 Sum_probs=76.1
Q ss_pred eeeeeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCceEEEEecCCcc
Q 023747 29 ELLKVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFDNKAI 107 (278)
Q Consensus 29 ~~~~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Ptl~~~~~~~~~ 107 (278)
.+....+.+++++|.||++| ++|+.+.|.|.++++++.+ +.|+.+|++.+ +.++++|+|.++ ||+ .++.+|.
T Consensus 22 ~~~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~-v~~~~vd~~~~---~~l~~~~~v~~~-Pt~-~~~~~G~- 94 (114)
T 2oe3_A 22 EFRNLIKQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD-VRFVKCDVDES---PDIAKECEVTAM-PTF-VLGKDGQ- 94 (114)
T ss_dssp HHHHHHHHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT-SEEEEEETTTC---HHHHHHTTCCSB-SEE-EEEETTE-
T ss_pred HHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCCC---HHHHHHCCCCcc-cEE-EEEeCCe-
Confidence 34445567789999999999 9999999999999999988 99999999998 899999999999 999 5555443
Q ss_pred eeecCCCCCChHHHHHHHHH
Q 023747 108 SKFLLESDLTPSNIEEFCSR 127 (278)
Q Consensus 108 ~~~~~~g~~~~~~i~~fi~~ 127 (278)
....+.|.. .+.+.+++++
T Consensus 95 ~~~~~~G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 95 LIGKIIGAN-PTALEKGIKD 113 (114)
T ss_dssp EEEEEESSC-HHHHHHHHHT
T ss_pred EEEEEeCCC-HHHHHHHHHh
Confidence 333456777 8899888864
No 187
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.36 E-value=2.2e-12 Score=99.88 Aligned_cols=97 Identities=19% Similarity=0.386 Sum_probs=76.7
Q ss_pred cchHHHhh---cCCCcEEEEEE-CCCChhHHHHHHHH---HHHHHHhcCCCceEEEEEeCCCCC------------C-CC
Q 023747 156 KTFDDLVL---NSHKDVLLEVY-TPWCVTCETTSKQI---EKLAKHFKGLDNLVIAKIDASANE------------H-PK 215 (278)
Q Consensus 156 ~~~~~~i~---~~~~~~~v~f~-~~~c~~c~~~~~~~---~~~a~~~~~~~~~~~~~vd~~~~~------------~-~~ 215 (278)
.++.+.+. ..+++++|.|| ++||++|+.+.|.+ .++++.+.. ++.++.+|++... + ..
T Consensus 34 ~~~~~~~~~a~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~--~~~~v~vd~~~~~~~~~~~~~~~~~l~~~ 111 (154)
T 2ju5_A 34 ESYAEALEHSKQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGV--HLHMVEVDFPQKNHQPEEQRQKNQELKAQ 111 (154)
T ss_dssp ECHHHHHHHHHHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHH--HCEEEEEECCSSCCCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcC--cEEEEEecCccccCCChhhHhhHHHHHHH
Confidence 34444442 34789999999 99999999999999 777776644 6999999998753 3 47
Q ss_pred CCCcCCCeEEEE-eCCCccCceEecCCC--CHHHHHHHHHHHhcc
Q 023747 216 LQVEEYPTLLFY-PAGDKANPIKVSARS--SSKNIAAFIKEQLKE 257 (278)
Q Consensus 216 ~~i~~~Ptl~~f-~~g~~~~~~~~~g~~--~~~~l~~~i~~~~~~ 257 (278)
|+|.++|+++++ ++|+.+. ++ |.. +.+.+.++|++.++.
T Consensus 112 ~~v~~~Pt~~~~d~~G~~~~--~~-G~~~~~~~~l~~~l~~~l~~ 153 (154)
T 2ju5_A 112 YKVTGFPELVFIDAEGKQLA--RM-GFEPGGGAAYVSKVKSALKL 153 (154)
T ss_dssp TTCCSSSEEEEECTTCCEEE--EE-CCCTTCHHHHHHHHHHHHTC
T ss_pred cCCCCCCEEEEEcCCCCEEE--Ee-cCCCCCHHHHHHHHHHHHhc
Confidence 899999999999 5666543 56 877 899999999988763
No 188
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.36 E-value=1.1e-12 Score=95.66 Aligned_cols=98 Identities=14% Similarity=0.168 Sum_probs=79.8
Q ss_pred ccCCCCceeeeeeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCceEE
Q 023747 21 SNLPTTSLELLKVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVV 99 (278)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Ptl~ 99 (278)
.++..++... .+.+++++|+||++| ++|+.+.|.+.++++++.+ +.|+.||++.. +.++++|+|.++ ||+
T Consensus 13 ~~~~~~f~~~---~~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~-v~~~~vd~~~~---~~~~~~~~v~~~-Pt~- 83 (112)
T 1syr_A 13 VTSQAEFDSI---ISQNELVIVDFFAEWCGPCKRIAPFYEECSKTYTK-MVFIKVDVDEV---SEVTEKENITSM-PTF- 83 (112)
T ss_dssp ECSHHHHHHH---HHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTT---HHHHHHTTCCSS-SEE-
T ss_pred ECCHHHHHHH---HccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC-CEEEEEECCCC---HHHHHHcCCCcc-cEE-
Confidence 3444444443 357789999999999 9999999999999999986 99999999998 899999999999 999
Q ss_pred EEecCCcceeecCCCCCChHHHHHHHHHHh
Q 023747 100 TAFDNKAISKFLLESDLTPSNIEEFCSRLL 129 (278)
Q Consensus 100 ~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 129 (278)
.++.+|. ....+.|. +.+++.+++++.+
T Consensus 84 ~~~~~G~-~~~~~~G~-~~~~l~~~l~~~l 111 (112)
T 1syr_A 84 KVYKNGS-SVDTLLGA-NDSALKQLIEKYA 111 (112)
T ss_dssp EEEETTE-EEEEEESC-CHHHHHHHHHTTC
T ss_pred EEEECCc-EEEEEeCC-CHHHHHHHHHHhh
Confidence 5665443 33345777 9999999998754
No 189
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.35 E-value=3.6e-12 Score=94.56 Aligned_cols=103 Identities=13% Similarity=0.134 Sum_probs=81.8
Q ss_pred cccccCCCCceeeeeeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCC-CcccchhHHHHcCCCCCC
Q 023747 18 TLISNLPTTSLELLKVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIA-DEDLAKPFLTLFGLEESK 95 (278)
Q Consensus 18 ~~v~~~~~~~~~~~~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~-~~~~~~~l~~~~~i~~~~ 95 (278)
.++.++.+++...+.. ..+++++|.||++| ++|+.+.|.++++++++++ +.|+.+|++ .. +.++++|+|.++
T Consensus 19 ~v~~l~~~~~~~~~~~-~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~-~~~~~vd~~~~~---~~~~~~~~v~~~- 92 (124)
T 1faa_A 19 KVTEVNKDTFWPIVKA-AGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLD-VIFLKLDCNQEN---KTLAKELGIRVV- 92 (124)
T ss_dssp SEEEECTTTHHHHHHH-TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEECSSTT---HHHHHHHCCSSS-
T ss_pred ceEEecchhHHHHHHh-cCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCCC-CEEEEEecCcch---HHHHHHcCCCee-
Confidence 3566777776554432 25678999999999 9999999999999999986 999999998 56 899999999999
Q ss_pred ceEEEEecCCcceeecCCCCCChHHHHHHHHHHh
Q 023747 96 NTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLL 129 (278)
Q Consensus 96 Ptl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 129 (278)
||+ .++.+|. ....+.|.. .+++.+++++.+
T Consensus 93 Pt~-~~~~~G~-~~~~~~G~~-~~~l~~~i~~~~ 123 (124)
T 1faa_A 93 PTF-KILKENS-VVGEVTGAK-YDKLLEAIQAAR 123 (124)
T ss_dssp SEE-EEEETTE-EEEEEESSC-HHHHHHHHHHHT
T ss_pred eEE-EEEeCCc-EEEEEcCCC-HHHHHHHHHHhh
Confidence 998 5665543 233346665 899999998764
No 190
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.35 E-value=1.6e-12 Score=94.61 Aligned_cols=90 Identities=11% Similarity=0.205 Sum_probs=75.3
Q ss_pred eecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCceEEEEecCCcceeecC
Q 023747 34 SQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFDNKAISKFLL 112 (278)
Q Consensus 34 ~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Ptl~~~~~~~~~~~~~~ 112 (278)
...+++++|.||++| ++|+.+.|.|++++..+.+ +.|+.+|++.. +.++++|+|.++ ||+ .++.+|. ....+
T Consensus 16 ~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~-v~~~~vd~~~~---~~l~~~~~v~~~-Pt~-~~~~~G~-~v~~~ 88 (110)
T 2l6c_A 16 FEGLSDAIVFFHKNLCPHCKNMEKVLDKFGARAPQ-VAISSVDSEAR---PELMKELGFERV-PTL-VFIRDGK-VAKVF 88 (110)
T ss_dssp HTTCSEEEEEEECSSCSTHHHHHHHHHHHHTTCTT-SCEEEEEGGGC---HHHHHHTTCCSS-CEE-EEEESSS-EEEEE
T ss_pred HHcCCCEEEEEECCCCHhHHHHHHHHHHHHHHCCC-cEEEEEcCcCC---HHHHHHcCCccc-CEE-EEEECCE-EEEEE
Confidence 345688999999999 9999999999999999874 99999999988 899999999999 999 5554443 33445
Q ss_pred CCCCChHHHHHHHHHHhc
Q 023747 113 ESDLTPSNIEEFCSRLLH 130 (278)
Q Consensus 113 ~g~~~~~~i~~fi~~~~~ 130 (278)
.|..+.++|.+++....+
T Consensus 89 ~G~~~~~~l~~~~~~~~~ 106 (110)
T 2l6c_A 89 SGIMNPRELQALYASIHH 106 (110)
T ss_dssp ESCCCHHHHHHHHHTC--
T ss_pred cCCCCHHHHHHHHHHHhh
Confidence 788999999999988643
No 191
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.35 E-value=2.4e-12 Score=105.96 Aligned_cols=100 Identities=16% Similarity=0.231 Sum_probs=81.0
Q ss_pred cchHHHh-hcCCCcEEEEEE-----CCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcCCCeEEEE
Q 023747 156 KTFDDLV-LNSHKDVLLEVY-----TPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTLLFY 227 (278)
Q Consensus 156 ~~~~~~i-~~~~~~~~v~f~-----~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~~Ptl~~f 227 (278)
+.+.+++ ....++++|.|| +|||++|+.+.|.|.+++..+.+.+++.++.+||+.+ ++ .+|+|.++||+++|
T Consensus 9 ~~l~~~~~~~~~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Ptl~~~ 88 (229)
T 2ywm_A 9 MQLKELAQKEFKEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPFTHKEETEKYGVDRVPTIVIE 88 (229)
T ss_dssp HHHHHHHHHHCCSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTTTCHHHHHHTTCCBSSEEEEE
T ss_pred HHHHHHHHHhccCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCcccHHHHHHcCCCcCcEEEEE
Confidence 4455555 345667766666 8899999999999999999984333799999999988 66 59999999999999
Q ss_pred eCCCccCceEecCCCCHHHHHHHHHHHhcc
Q 023747 228 PAGDKANPIKVSARSSSKNIAAFIKEQLKE 257 (278)
Q Consensus 228 ~~g~~~~~~~~~g~~~~~~l~~~i~~~~~~ 257 (278)
++|.. .++|.|.++.+.+..|+...+..
T Consensus 89 ~~~~~--~~~~~G~~~~~~l~~~~~~~~~~ 116 (229)
T 2ywm_A 89 GDKDY--GIRYIGLPAGLEFTTLINGIFHV 116 (229)
T ss_dssp SSSCC--CEEEESCCCTTHHHHHHHHHHHH
T ss_pred CCCcc--cceecCCccHHHHHHHHHHHHhc
Confidence 85543 45899999999999999987653
No 192
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.33 E-value=7.7e-13 Score=103.57 Aligned_cols=97 Identities=13% Similarity=0.271 Sum_probs=72.6
Q ss_pred cchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-C-C-CCCCC--cCCCeEEEE-eC
Q 023747 156 KTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-E-H-PKLQV--EEYPTLLFY-PA 229 (278)
Q Consensus 156 ~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~-~-~~~~i--~~~Ptl~~f-~~ 229 (278)
+++... ...+++++|.||++||++|+.+.|.+.+++..+.. ++.|+.||++.+ + . ..+++ ..+|++++| ++
T Consensus 37 ~~~~~~-~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~--~~~~~~v~~d~~~~~~~~~~~~~~~~~Pt~~~~d~~ 113 (164)
T 1sen_A 37 DGKKEA-AASGLPLMVIIHKSWCGACKALKPKFAESTEISEL--SHNFVMVNLEDEEEPKDEDFSPDGGYIPRILFLDPS 113 (164)
T ss_dssp HHHHHH-HHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHH--HTTSEEEEEEGGGSCSCGGGCTTCSCSSEEEEECTT
T ss_pred HHHHHH-HhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhc--CCeEEEEEecCCchHHHHHhcccCCcCCeEEEECCC
Confidence 344443 34589999999999999999999999998776644 356666666655 3 4 46666 679999999 67
Q ss_pred CCccCceEecCC----------CCHHHHHHHHHHHhcc
Q 023747 230 GDKANPIKVSAR----------SSSKNIAAFIKEQLKE 257 (278)
Q Consensus 230 g~~~~~~~~~g~----------~~~~~l~~~i~~~~~~ 257 (278)
|+.+. ++.|. .+.+.|.++|++.+..
T Consensus 114 G~~~~--~~~G~~~~~~~~~~~~~~~~l~~~l~~~l~~ 149 (164)
T 1sen_A 114 GKVHP--EIINENGNPSYKYFYVSAEQVVQGMKEAQER 149 (164)
T ss_dssp SCBCT--TCCCTTSCTTSTTCCCSHHHHHHHHHHHHHH
T ss_pred CCEEE--EEeCCCCccchhcccCCHHHHHHHHHHHHHh
Confidence 77654 45553 7889999999987753
No 193
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.33 E-value=2.1e-11 Score=112.52 Aligned_cols=177 Identities=12% Similarity=0.099 Sum_probs=127.2
Q ss_pred CceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCceEEEEecCCcceeecCCCCC
Q 023747 38 TLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFDNKAISKFLLESDL 116 (278)
Q Consensus 38 ~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Ptl~~~~~~~~~~~~~~~g~~ 116 (278)
.++.+.++... ..|+++...+++++.. .+++.+...| . .. ... |++ .+...+......|-|-.
T Consensus 19 ~~v~l~~~~~~~~~~~~~~~~~~~~~~~-s~~i~~~~~~---~---~~-------~~~-p~~-~~~~~~~~~~i~f~g~p 82 (521)
T 1hyu_A 19 KPVELIATLDDSAKSAEIKELLAEIAEL-SDKVTFKEDN---T---LP-------VRK-PSF-LITNPGSQQGPRFAGSP 82 (521)
T ss_dssp SCEEEEEECCSSHHHHHHHHHHHHHHTT-CTTEEEEECT---T---SS-------SCS-SEE-EEECTTCCCSCEEESCC
T ss_pred CCEEEEEEeCCCcchHHHHHHHHHHHHh-CCceEEEEcC---C---cc-------cCC-CEE-EEecCCCcceEEEeccC
Confidence 34544445444 7799999999998765 4467764321 2 11 334 999 66644433345558888
Q ss_pred ChHHHHHHHHHHhcCcccccccCCCCCCCCCCCeEEEcccchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhc
Q 023747 117 TPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFK 196 (278)
Q Consensus 117 ~~~~i~~fi~~~~~~~~~~~~~s~~~p~~~~~~v~~l~~~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~ 196 (278)
.-.++..|+..++.-. +.-..++.+.++.+........++.||++||++|+.+.|.+++++..+.
T Consensus 83 ~g~e~~s~~~~l~~~~---------------~~~~~~~~~~~~~i~~~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~ 147 (521)
T 1hyu_A 83 LGHEFTSLVLALLWTG---------------GHPSKEAQSLLEQIRDIDGDFEFETYYSLSCHNCPDVVQALNLMAVLNP 147 (521)
T ss_dssp CGGGHHHHHHHHHHHT---------------TCCCCSCHHHHHHHHHCCSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT
T ss_pred cchhHHHHHHHHHhhc---------------CCCCCCCHHHHHHHHhcCCCcceEEEECCCCcCcHHHHHHHHHHHhHcC
Confidence 8889999998876421 1123445566666543345667999999999999999999999998875
Q ss_pred CCCceEEEEEeCCCC-CC-CCCCCcCCCeEEEEeCCCccCceEecCCCCHHHHHHHHHHH
Q 023747 197 GLDNLVIAKIDASAN-EH-PKLQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQ 254 (278)
Q Consensus 197 ~~~~~~~~~vd~~~~-~~-~~~~i~~~Ptl~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~ 254 (278)
++.+..+|.+.+ ++ .+|++.++|++++ +|+.+ ..|..+.+.|.+|+.+.
T Consensus 148 ---~v~~~~vd~~~~~~~~~~~~i~svPt~~i--~g~~~----~~G~~~~~~l~~~l~~~ 198 (521)
T 1hyu_A 148 ---RIKHTAIDGGTFQNEITERNVMGVPAVFV--NGKEF----GQGRMTLTEIVAKVDTG 198 (521)
T ss_dssp ---TEEEEEEETTTCHHHHHHTTCCSSSEEEE--TTEEE----EESCCCHHHHHHHHCCS
T ss_pred ---ceEEEEEechhhHHHHHHhCCCccCEEEE--CCEEE----ecCCCCHHHHHHHHhhc
Confidence 599999999988 66 5999999999977 66543 45889999999998654
No 194
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=99.33 E-value=1.5e-10 Score=96.68 Aligned_cols=188 Identities=11% Similarity=0.113 Sum_probs=139.9
Q ss_pred eec-CCceEEEEEeCccchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCceEEEEecCC------c
Q 023747 34 SQI-DTLDMVYVFAKADDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFDNK------A 106 (278)
Q Consensus 34 ~~~-~~~~~v~F~~~~~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Ptl~~~~~~~------~ 106 (278)
.+. ..+++|.||.++ |....+.|.++|..+++.+.|+... . .++++++++++ |+| .+|..+ .
T Consensus 21 ~~~~~~v~vVgff~~~--~~~~~~~F~~~A~~lr~~~~F~~t~---~---~~v~~~~~v~~--p~i-vlfk~~~~~~kfd 89 (250)
T 3ec3_A 21 LKDGDDVVILGVFQGV--GDPGYLQYQDAANTLREDYKFHHTF---S---TEIAKFLKVSL--GKL-VLMQPEKFQSKYE 89 (250)
T ss_dssp HHHCSSCEEEEECSCT--TCHHHHHHHHHHHHHTTTCCEEEEC---C---HHHHHHHTCCS--SEE-EEECCGGGCCTTS
T ss_pred HhcCCCeEEEEEEcCC--CchHHHHHHHHHHhhhcCcEEEEEC---c---HHHHHHcCCCC--CeE-EEEecchhhcccc
Confidence 445 788999999987 6788999999999999999998853 4 67999999976 899 555431 1
Q ss_pred ceeecCC--CCCChHHHHHHHHHHhcCcccccccCCCCCCCCCCCeEEEcccchHHHhhcCCCcEEEEEECC-CC---h-
Q 023747 107 ISKFLLE--SDLTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIVVGKTFDDLVLNSHKDVLLEVYTP-WC---V- 179 (278)
Q Consensus 107 ~~~~~~~--g~~~~~~i~~fi~~~~~~~~~~~~~s~~~p~~~~~~v~~l~~~~~~~~i~~~~~~~~v~f~~~-~c---~- 179 (278)
..+..|. |..+.++|.+|+.... -..|..++.+++.... .+++.++.|+.+ .+ .
T Consensus 90 e~~~~y~g~~~~~~~~l~~fi~~~~-----------------~Plv~e~t~~n~~~~~--~~~~l~~~~~~~d~~~~~~~ 150 (250)
T 3ec3_A 90 PRMHVMDVQGSTEASAIKDYVVKHA-----------------LPLVGHRKTSNDAKRY--SKRPLVVVYYSVDFSFDYRT 150 (250)
T ss_dssp CSCEEEECCTTSCHHHHHHHHHHHS-----------------SCTEEEECTTTHHHHS--CSSSEEEEEECCCCSTTTHH
T ss_pred ccceeccCCCCCCHHHHHHHHHHcC-----------------CCceeecCccchhhhh--ccCccEEEEEecccccccch
Confidence 2234456 4789999999999863 2248999999998866 367887778753 22 3
Q ss_pred hHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCc--CC-CeEEEEeCCCccCceEec-CCCCHHHHHHHHHH
Q 023747 180 TCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVE--EY-PTLLFYPAGDKANPIKVS-ARSSSKNIAAFIKE 253 (278)
Q Consensus 180 ~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~--~~-Ptl~~f~~g~~~~~~~~~-g~~~~~~l~~~i~~ 253 (278)
....+...+.++|+.++ ++.|+.+|++.. .. ..+++. ++ |.++++..++. .+.+. +..+.++|.+|+.+
T Consensus 151 ~~~~~~~~~~~vAk~~k---ki~F~~~d~~~~~~~l~~fgl~~~~~~p~~~~~~~~~~--ky~~~~~~~t~~~i~~Fv~~ 225 (250)
T 3ec3_A 151 ATQFWRNKVLEVAKDFP---EYTFAIADEEDYATEVKDLGLSESGGDVNAAILDESGK--KFAMEPEEFDSDALREFVMA 225 (250)
T ss_dssp HHHHHHHHHHHHHTTCT---TSEEEEEETTTTHHHHHHTTCSSCSCSCEEEEECTTSC--EEECCCCSCCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhhc---ceeEEEEcHHHHHHHHHHcCCCccCCCcEEEEEcCCCc--eecCCcccCCHHHHHHHHHH
Confidence 33557889999999998 599999998776 22 455665 34 47777653322 33444 67999999999998
Q ss_pred Hhc
Q 023747 254 QLK 256 (278)
Q Consensus 254 ~~~ 256 (278)
.+.
T Consensus 226 ~~~ 228 (250)
T 3ec3_A 226 FKK 228 (250)
T ss_dssp HHT
T ss_pred HHC
Confidence 885
No 195
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.33 E-value=1.1e-11 Score=88.75 Aligned_cols=85 Identities=14% Similarity=0.208 Sum_probs=73.2
Q ss_pred cCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCceEEEEecCCcceeecCCC
Q 023747 36 IDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFDNKAISKFLLES 114 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Ptl~~~~~~~~~~~~~~~g 114 (278)
.++++++.||++| ++|+.+.|.+.++++.++ .+.|+.+|++.. +.++++|+|.++ ||+ .++.+|. ....+.|
T Consensus 18 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~---~~~~~~~~v~~~-Pt~-~~~~~g~-~~~~~~G 90 (104)
T 2vim_A 18 KGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP-EVEFAKVDVDQN---EEAAAKYSVTAM-PTF-VFIKDGK-EVDRFSG 90 (104)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTC---HHHHHHTTCCSS-SEE-EEEETTE-EEEEEES
T ss_pred CCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC-CCEEEEEeccCC---HHHHHHcCCccc-cEE-EEEeCCc-EEEEEeC
Confidence 5778999999999 999999999999999998 499999999998 899999999999 999 6665443 3334467
Q ss_pred CCChHHHHHHHHHH
Q 023747 115 DLTPSNIEEFCSRL 128 (278)
Q Consensus 115 ~~~~~~i~~fi~~~ 128 (278)
.+.+++.+|++++
T Consensus 91 -~~~~~l~~~l~~~ 103 (104)
T 2vim_A 91 -ANETKLRETITRH 103 (104)
T ss_dssp -SCHHHHHHHHHHH
T ss_pred -CCHHHHHHHHHhh
Confidence 6899999999875
No 196
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.32 E-value=8.6e-12 Score=91.57 Aligned_cols=84 Identities=14% Similarity=0.232 Sum_probs=72.0
Q ss_pred cCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCceEEEEecCCcceeecCCC
Q 023747 36 IDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFDNKAISKFLLES 114 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Ptl~~~~~~~~~~~~~~~g 114 (278)
.+++++|.||++| ++|+.+.|.|.++++++ .+.|+.+|++.. +.++++|+|.++ ||+ .++.+|. ....+.|
T Consensus 32 ~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~--~~~~~~vd~~~~---~~~~~~~~v~~~-Pt~-~~~~~G~-~~~~~~G 103 (117)
T 2xc2_A 32 KNKLVVVDFFATWCGPCKTIAPLFKELSEKY--DAIFVKVDVDKL---EETARKYNISAM-PTF-IAIKNGE-KVGDVVG 103 (117)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHTTS--SSEEEEEETTTS---HHHHHHTTCCSS-SEE-EEEETTE-EEEEEES
T ss_pred CCCEEEEEEECCCCHhHHHHhHHHHHHHHHc--CcEEEEEECCcc---HHHHHHcCCCcc-ceE-EEEeCCc-EEEEEeC
Confidence 6788999999999 99999999999999998 599999999998 899999999999 999 5555443 2334467
Q ss_pred CCChHHHHHHHHHH
Q 023747 115 DLTPSNIEEFCSRL 128 (278)
Q Consensus 115 ~~~~~~i~~fi~~~ 128 (278)
.+.+++.++++++
T Consensus 104 -~~~~~l~~~l~~~ 116 (117)
T 2xc2_A 104 -ASIAKVEDMIKKF 116 (117)
T ss_dssp -SCHHHHHHHHHHH
T ss_pred -CCHHHHHHHHHHh
Confidence 6889999999875
No 197
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.32 E-value=7.2e-12 Score=94.17 Aligned_cols=90 Identities=10% Similarity=0.187 Sum_probs=76.8
Q ss_pred ecCCceEEEEEeCc-cchHHHHHHHH--HHHHHhcCceEEEEEeC---CCcccchhHHHHcCC---CCCCceEEEEecCC
Q 023747 35 QIDTLDMVYVFAKA-DDLKSLLEPLE--DIARNFKGKIMFTAVDI---ADEDLAKPFLTLFGL---EESKNTVVTAFDNK 105 (278)
Q Consensus 35 ~~~~~~~v~F~~~~-~~c~~~~~~~~--~la~~~~~~v~f~~vd~---~~~~~~~~l~~~~~i---~~~~Ptl~~~~~~~ 105 (278)
..+++++|.||++| ++|+.+.|.|. +++..+++.+.|+.||+ +.. ..++++|+| .++ ||+ .+++.+
T Consensus 27 ~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~~~vd~~~~~~~---~~l~~~~~v~~~~~~-Pt~-~~~d~~ 101 (133)
T 3fk8_A 27 RTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKHFEVVKIDVGNFDRN---LELSQAYGDPIQDGI-PAV-VVVNSD 101 (133)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHHHCEEEEEECTTTTSS---HHHHHHTTCGGGGCS-SEE-EEECTT
T ss_pred hcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcCCEEEEEEeCCcccch---HHHHHHhCCccCCcc-ceE-EEECCC
Confidence 45789999999999 99999999999 99999987899999999 666 899999999 999 999 777544
Q ss_pred cceeecCCC-------CCChHHHHHHHHHHh
Q 023747 106 AISKFLLES-------DLTPSNIEEFCSRLL 129 (278)
Q Consensus 106 ~~~~~~~~g-------~~~~~~i~~fi~~~~ 129 (278)
+...+.+.| ..+.+++.+|++++.
T Consensus 102 G~~~~~~~g~~~~~~~~~~~~~l~~~l~~l~ 132 (133)
T 3fk8_A 102 GKVRYTTKGGELANARKMSDQGIYDFFAKIT 132 (133)
T ss_dssp SCEEEECCSCTTTTGGGSCHHHHHHHHHHHH
T ss_pred CCEEEEecCCcccccccCCHHHHHHHHHHhc
Confidence 444555566 578999999998763
No 198
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=98.99 E-value=1.5e-13 Score=98.65 Aligned_cols=102 Identities=15% Similarity=0.193 Sum_probs=82.5
Q ss_pred ccccCCCCceeeeeeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCce
Q 023747 19 LISNLPTTSLELLKVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNT 97 (278)
Q Consensus 19 ~v~~~~~~~~~~~~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Pt 97 (278)
++.++..++...+ .+.++++++.||++| ++|+.+.|.++++++.+.+.+.|+.+|++.. ..++++|+|.++ |+
T Consensus 3 v~~l~~~~~~~~~--~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~~~~~v~~~-Pt 76 (106)
T 2yj7_A 3 VIEVTDENFEQEV--LKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGKVKVVKVNVDEN---PNTAAQYGIRSI-PT 76 (106)
Confidence 3455555554433 456788999999999 9999999999999999998899999999988 899999999999 99
Q ss_pred EEEEecCCcceeecCCCCCChHHHHHHHHHH
Q 023747 98 VVTAFDNKAISKFLLESDLTPSNIEEFCSRL 128 (278)
Q Consensus 98 l~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~ 128 (278)
+ .++.+|. ....+.|..+.+++.+++++.
T Consensus 77 ~-~~~~~g~-~~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 2yj7_A 77 L-LLFKNGQ-VVDRLVGAQPKEALKERIDKH 105 (106)
Confidence 9 5554443 344567888888999888764
No 199
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.32 E-value=2.1e-11 Score=92.71 Aligned_cols=102 Identities=14% Similarity=0.268 Sum_probs=81.7
Q ss_pred EEEcccchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCC--------------------
Q 023747 151 QIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA-------------------- 210 (278)
Q Consensus 151 ~~l~~~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~-------------------- 210 (278)
..+++..+.... ..+++++|.||++||++|..+.+.+.+++..+.+ ++.++.|+++.
T Consensus 15 ~~~~g~~~~~~~-~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 91 (148)
T 2b5x_A 15 AWLNGEVTREQL-IGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQD--QLNVVAVHMPRSEDDLDPGKIKETAAEHDIT 91 (148)
T ss_dssp EEESCCCCHHHH-TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT--TSEEEEEECCCSTTTSSHHHHHHHHHHTTCC
T ss_pred ccccCcccchhh-cCCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcC--CcEEEEEEcCCCccccCHHHHHHHHHHcCCC
Confidence 567777766543 3578999999999999999999999999999987 48999998653
Q ss_pred -------C-CC-CCCCCcCCCeEEEE-eCCCccCceEecCCCCHHHHHHHHHHHhcc
Q 023747 211 -------N-EH-PKLQVEEYPTLLFY-PAGDKANPIKVSARSSSKNIAAFIKEQLKE 257 (278)
Q Consensus 211 -------~-~~-~~~~i~~~Ptl~~f-~~g~~~~~~~~~g~~~~~~l~~~i~~~~~~ 257 (278)
+ ++ ..|++..+|+++++ ++|+.. ..+.|..+.+.+.++|++.+..
T Consensus 92 ~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~--~~~~g~~~~~~l~~~l~~~l~~ 146 (148)
T 2b5x_A 92 QPIFVDSDHALTDAFENEYVPAYYVFDKTGQLR--HFQAGGSGMKMLEKRVNRVLAE 146 (148)
T ss_dssp SCEEECSSCHHHHHTCCCCSSEEEEECTTCBEE--EEEESCSTTHHHHHHHHHHHTT
T ss_pred cceEECCchhHHHHhCCCCCCEEEEECCCCcEE--EEecCCCCHHHHHHHHHHHHhc
Confidence 2 22 36799999999999 555433 3678888999999999988764
No 200
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.31 E-value=4.8e-12 Score=95.70 Aligned_cols=101 Identities=13% Similarity=0.050 Sum_probs=76.5
Q ss_pred cccccCCCCceeeeeeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCc
Q 023747 18 TLISNLPTTSLELLKVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKN 96 (278)
Q Consensus 18 ~~v~~~~~~~~~~~~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~P 96 (278)
.++.++..++...+...+.+++++|+||++| ++|+.+.|.|++++.++.+ +.|+.||++.. . ++|+|.++ |
T Consensus 11 ~v~~i~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~~-v~~~~vd~~~~---~---~~~~i~~~-P 82 (135)
T 2dbc_A 11 ELREISGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFPE-TKFVKAIVNSC---I---EHYHDNCL-P 82 (135)
T ss_dssp SCEECCHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCSS-EEEEEECCSSS---C---SSCCSSCC-S
T ss_pred ceEEcCHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCC-cEEEEEEhhcC---c---ccCCCCCC-C
Confidence 4555655555554443334468999999999 9999999999999999965 99999999987 4 78999999 9
Q ss_pred eEEEEecCCcceeecCCCC-------CChHHHHHHHHHH
Q 023747 97 TVVTAFDNKAISKFLLESD-------LTPSNIEEFCSRL 128 (278)
Q Consensus 97 tl~~~~~~~~~~~~~~~g~-------~~~~~i~~fi~~~ 128 (278)
|+ .++.+|.. ...+.|. .+.+.|.+++.+.
T Consensus 83 t~-~~~~~G~~-v~~~~G~~~~~~~~~~~~~l~~~l~~~ 119 (135)
T 2dbc_A 83 TI-FVYKNGQI-EGKFIGIIECGGINLKLEELEWKLSEV 119 (135)
T ss_dssp EE-EEESSSSC-SEEEESTTTTTCTTCCHHHHHHHHHHH
T ss_pred EE-EEEECCEE-EEEEEeEEeeCCCcCCHHHHHHHHHHc
Confidence 99 55554432 2222343 3789999999985
No 201
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.31 E-value=8.2e-12 Score=93.72 Aligned_cols=86 Identities=21% Similarity=0.385 Sum_probs=72.0
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCC----------------------C-CC-CCCCCcC
Q 023747 165 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA----------------------N-EH-PKLQVEE 220 (278)
Q Consensus 165 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~----------------------~-~~-~~~~i~~ 220 (278)
.+++++|.||++||++|..+.+.+.+++..+. ++.++.|+++. + ++ ..|++.+
T Consensus 23 ~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~ 99 (136)
T 1lu4_A 23 QGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP---AVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARYNVPW 99 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHHTTCCS
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHCC---CcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHhcCCCC
Confidence 47899999999999999999999999999997 58999999876 2 33 3689999
Q ss_pred CCeEEEEeCCCccCceEec---CCCCHHHHHHHHHHHh
Q 023747 221 YPTLLFYPAGDKANPIKVS---ARSSSKNIAAFIKEQL 255 (278)
Q Consensus 221 ~Ptl~~f~~g~~~~~~~~~---g~~~~~~l~~~i~~~~ 255 (278)
+|+++++..++.+ . .+. |..+.+.|.++|++.+
T Consensus 100 ~P~~~lid~~G~i-~-~~~~~~g~~~~~~l~~~l~~ll 135 (136)
T 1lu4_A 100 QPAFVFYRADGTS-T-FVNNPTAAMSQDELSGRVAALT 135 (136)
T ss_dssp SSEEEEECTTSCE-E-EECCSSSCCCHHHHHHHHHHC-
T ss_pred CCEEEEECCCCcE-E-EEEcCCCccCHHHHHHHHHHHh
Confidence 9999999544444 2 678 8899999999998764
No 202
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.30 E-value=5.6e-12 Score=86.90 Aligned_cols=81 Identities=7% Similarity=0.130 Sum_probs=71.2
Q ss_pred CceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCceEEEEecCCcceeecCCCCC
Q 023747 38 TLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFDNKAISKFLLESDL 116 (278)
Q Consensus 38 ~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Ptl~~~~~~~~~~~~~~~g~~ 116 (278)
.+.++.||++| ++|+.+.|.++++++++.+.+.|..+|++++ +.++++||+.++ ||+ .+ +|. . .+.|..
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~---~~~~~~~~v~~~-Pt~-~~-~G~-~---~~~G~~ 72 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPDAVEVEYINVMEN---PQKAMEYGIMAV-PTI-VI-NGD-V---EFIGAP 72 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSSSEEEEEEESSSS---CCTTTSTTTCCS-SEE-EE-TTE-E---ECCSSS
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCCceEEEEEECCCC---HHHHHHCCCccc-CEE-EE-CCE-E---eeecCC
Confidence 46799999999 9999999999999999998899999999988 889999999999 999 55 332 2 457888
Q ss_pred ChHHHHHHHHHH
Q 023747 117 TPSNIEEFCSRL 128 (278)
Q Consensus 117 ~~~~i~~fi~~~ 128 (278)
+.+++.+++++.
T Consensus 73 ~~~~l~~~l~~~ 84 (85)
T 1fo5_A 73 TKEALVEAIKKR 84 (85)
T ss_dssp SSHHHHHHHHHH
T ss_pred CHHHHHHHHHHh
Confidence 999999999875
No 203
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.30 E-value=7.5e-13 Score=95.91 Aligned_cols=74 Identities=14% Similarity=0.225 Sum_probs=59.2
Q ss_pred CCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCC------CC-CC-CCCCCcCCCeEEEEeCCCccCceE
Q 023747 166 HKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDAS------AN-EH-PKLQVEEYPTLLFYPAGDKANPIK 237 (278)
Q Consensus 166 ~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~------~~-~~-~~~~i~~~Ptl~~f~~g~~~~~~~ 237 (278)
++..+|.|||+||++|+.+.|.|.+++..+. .+|++ .+ ++ .+|+|.++||+++ +|+ .
T Consensus 12 ~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~--------~v~~~~~~~~~~~~~l~~~~~V~~~PT~~i--~G~-----~ 76 (106)
T 3kp8_A 12 RQIGGTMYGAYWCPHCQDQKELFGAAFDQVP--------YVECSPNGPGTPQAQECTEAGITSYPTWII--NGR-----T 76 (106)
T ss_dssp HHHTCEEEECTTCHHHHHHHHHHGGGGGGSC--------EEESCTTCTTSCCCHHHHHTTCCSSSEEEE--TTE-----E
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHhCC--------EEEEecccccchhHHHHHHcCCeEeCEEEE--CCE-----E
Confidence 4567999999999999999999999986663 45555 23 34 4889999999877 553 4
Q ss_pred ecCCCCHHHHHHHHHHH
Q 023747 238 VSARSSSKNIAAFIKEQ 254 (278)
Q Consensus 238 ~~g~~~~~~l~~~i~~~ 254 (278)
|.|..+.+.|.+|+.-.
T Consensus 77 ~~G~~~~~~l~~~~~~~ 93 (106)
T 3kp8_A 77 YTGVRSLEALAVASGYP 93 (106)
T ss_dssp EESCCCHHHHHHHHTCC
T ss_pred ecCCCCHHHHHHHhCCc
Confidence 89999999999998533
No 204
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.30 E-value=3.1e-13 Score=102.45 Aligned_cols=102 Identities=15% Similarity=0.089 Sum_probs=77.7
Q ss_pred ccccCCCCceeeeeeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcC-ceEEEEEeCCCcccchhHHHHcCCC----
Q 023747 19 LISNLPTTSLELLKVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKG-KIMFTAVDIADEDLAKPFLTLFGLE---- 92 (278)
Q Consensus 19 ~v~~~~~~~~~~~~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~-~v~f~~vd~~~~~~~~~l~~~~~i~---- 92 (278)
++.++..++...+. ...+.+++|+||++| ++|+.+.|.|+++++++++ .+.|+.||++.. +.++++|+|.
T Consensus 9 v~~l~~~~f~~~~~-~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~---~~~~~~~~v~~~~~ 84 (137)
T 2dj0_A 9 IKYFNDKTIDEELE-RDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRY---TDVSTRYKVSTSPL 84 (137)
T ss_dssp CEECCTTHHHHHHH-HSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTC---HHHHHHTTCCCCSS
T ss_pred EEEccHhhHHHHHh-cCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccC---HHHHHHccCcccCC
Confidence 56666766666542 223348999999999 9999999999999999986 799999999998 8999999999
Q ss_pred --CCCceEEEEecCCcceeecCCCCCChHHHHHHHHH
Q 023747 93 --ESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSR 127 (278)
Q Consensus 93 --~~~Ptl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~ 127 (278)
++ ||+ .++..|. ....+.|..+.+.+.+|+.+
T Consensus 85 ~~~~-Pt~-~~~~~G~-~~~~~~G~~~~~~l~~~l~~ 118 (137)
T 2dj0_A 85 TKQL-PTL-ILFQGGK-EAMRRPQIDKKGRAVSWTFS 118 (137)
T ss_dssp SSCS-SEE-EEESSSS-EEEEESCBCSSSCBCCCCCC
T ss_pred cCCC-CEE-EEEECCE-EEEEecCcCchHHHHHHHhc
Confidence 99 999 5555443 23334666665555555443
No 205
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.30 E-value=1.3e-11 Score=92.45 Aligned_cols=101 Identities=16% Similarity=0.314 Sum_probs=78.0
Q ss_pred eEEEcccchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCC-------------------
Q 023747 150 VQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA------------------- 210 (278)
Q Consensus 150 v~~l~~~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~------------------- 210 (278)
+..+++..+.-.. ..+++++|.||++||++|..+.+.+.+++..+. ++.++.|+++.
T Consensus 10 ~~~~~g~~~~l~~-~~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 85 (136)
T 1zzo_A 10 AKTLDGHDFHGES-LLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP---EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQ 85 (136)
T ss_dssp EEBTTSCEEEGGG-GTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEECSSCHHHHHHHHHHTTCTTSEE
T ss_pred cccCCCCEeeHHH-hCCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC---CeEEEEEeCCCCHHHHHHHHHHcCCCceEE
Confidence 4444454444322 247899999999999999999999999999987 58899999854
Q ss_pred ----C-CC-CCCCCcCCCeEEEEeCCCccCceEecCCCCHHHHHHHHHHHhc
Q 023747 211 ----N-EH-PKLQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLK 256 (278)
Q Consensus 211 ----~-~~-~~~~i~~~Ptl~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~~ 256 (278)
+ .+ ..|++.++|+++++..++.+ . .+.|..+.+.|.++|.+.++
T Consensus 86 ~~d~~~~~~~~~~i~~~P~~~~id~~g~i-~-~~~g~~~~~~l~~~l~~~l~ 135 (136)
T 1zzo_A 86 LADTDGSVWANFGVTQQPAYAFVDPHGNV-D-VVRGRMSQDELTRRVTALTS 135 (136)
T ss_dssp EECTTCHHHHHTTCCSSSEEEEECTTCCE-E-EEESCCCHHHHHHHHHHHC-
T ss_pred EEcCCcHHHHHcCCCCCceEEEECCCCCE-E-EEecCCCHHHHHHHHHHHhc
Confidence 2 22 36799999999999644444 2 68899999999999988764
No 206
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.30 E-value=1.1e-11 Score=95.35 Aligned_cols=89 Identities=10% Similarity=0.147 Sum_probs=61.7
Q ss_pred cCCCcEEEEEECCCChhHHHHHHHHHHHH---HHhcCCCceEEEEEeCCCCCC-CCCCCcCCCeEEEEe-CCCccCceEe
Q 023747 164 NSHKDVLLEVYTPWCVTCETTSKQIEKLA---KHFKGLDNLVIAKIDASANEH-PKLQVEEYPTLLFYP-AGDKANPIKV 238 (278)
Q Consensus 164 ~~~~~~~v~f~~~~c~~c~~~~~~~~~~a---~~~~~~~~~~~~~vd~~~~~~-~~~~i~~~Ptl~~f~-~g~~~~~~~~ 238 (278)
..+++++|.|||+||++|+.+.|.+.+.. ...+. ++..+.+|.+..+. .++++.++||+++|. +|+.+. +.
T Consensus 42 ~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~--~fv~V~vD~e~~~~~~~~~v~~~PT~~f~~~~G~~v~--~~ 117 (151)
T 3ph9_A 42 KSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQN--KFIMLNLMHETTDKNLSPDGQYVPRIMFVDPSLTVRA--DI 117 (151)
T ss_dssp HHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHH--TCEEEEESSCCSCGGGCTTCCCSSEEEEECTTSCBCT--TC
T ss_pred HcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhc--CeEEEEecCCchhhHhhcCCCCCCEEEEECCCCCEEE--EE
Confidence 45899999999999999999999998643 22221 35555555333344 488999999999997 777664 45
Q ss_pred cCC-------C---CHHHHHHHHHHHhc
Q 023747 239 SAR-------S---SSKNIAAFIKEQLK 256 (278)
Q Consensus 239 ~g~-------~---~~~~l~~~i~~~~~ 256 (278)
.|. . +.+.+++.+++.+.
T Consensus 118 ~G~~~~~~~~~~~~~~~~ll~~~~~al~ 145 (151)
T 3ph9_A 118 AGRYSNRLYTYEPRDLPLLIENMKKALR 145 (151)
T ss_dssp CCSCTTSTTCCCGGGHHHHHHHHHHHHS
T ss_pred eCCcCCcccccchhhHHHHHHHHHHHHH
Confidence 565 3 34556666655543
No 207
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.29 E-value=1.3e-12 Score=117.45 Aligned_cols=96 Identities=9% Similarity=0.041 Sum_probs=75.2
Q ss_pred cccccCCCCceeeeeeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhc---C-----ceEEEEEeCCCcccchhHHHH
Q 023747 18 TLISNLPTTSLELLKVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFK---G-----KIMFTAVDIADEDLAKPFLTL 88 (278)
Q Consensus 18 ~~v~~~~~~~~~~~~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~---~-----~v~f~~vd~~~~~~~~~l~~~ 88 (278)
.++.++..++...+.. ...++++|.||++| ++|+.+.|.|.++++++. + .+.|+.|||+.+ +.+|++
T Consensus 24 ~V~~Lt~~~F~~~l~~-~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~---~~la~~ 99 (470)
T 3qcp_A 24 SVVDLSGDDFSRVHRV-APLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASE---VDLCRK 99 (470)
T ss_dssp TEEECSCSCGGGTCTT-GGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTC---HHHHHH
T ss_pred CcEECCHHHHHHHHHh-CCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCC---HHHHHH
Confidence 4677777777755432 23468999999999 999999999999999997 3 599999999999 999999
Q ss_pred cCCCCCCceEEEEecCCcceeecCCCCCCh
Q 023747 89 FGLEESKNTVVTAFDNKAISKFLLESDLTP 118 (278)
Q Consensus 89 ~~i~~~~Ptl~~~~~~~~~~~~~~~g~~~~ 118 (278)
|+|.++ ||++++.+++......|.|.++.
T Consensus 100 y~V~~~-PTlilf~~gg~~~~~~y~G~r~~ 128 (470)
T 3qcp_A 100 YDINFV-PRLFFFYPRDSCRSNEECGTSSL 128 (470)
T ss_dssp TTCCSS-CEEEEEEESSCCCTTSCCCCCCE
T ss_pred cCCCcc-CeEEEEECCCceEEEEeeCCCCH
Confidence 999999 99944445544344455665443
No 208
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.29 E-value=1.4e-11 Score=93.31 Aligned_cols=105 Identities=10% Similarity=0.115 Sum_probs=81.9
Q ss_pred ccccC-CCCceeeeeee-ecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCC
Q 023747 19 LISNL-PTTSLELLKVS-QIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESK 95 (278)
Q Consensus 19 ~v~~~-~~~~~~~~~~~-~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~ 95 (278)
++.+. ..++...+... ..+++++|.||++| ++|+.+.|.|+++++++.+ +.|+.||++.. +.++++|||.++
T Consensus 26 ~~~i~~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~~-v~~~~v~~~~~---~~~~~~~~v~~~- 100 (139)
T 3d22_A 26 VHLITTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYPS-LMFLVIDVDEL---SDFSASWEIKAT- 100 (139)
T ss_dssp CEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTS---HHHHHHTTCCEE-
T ss_pred EEEeCCHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEeCccc---HHHHHHcCCCcc-
Confidence 34443 34444433322 35778999999999 9999999999999999965 99999999998 899999999999
Q ss_pred ceEEEEecCCcceeecCCCCCChHHHHHHHHHHhcC
Q 023747 96 NTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHG 131 (278)
Q Consensus 96 Ptl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~ 131 (278)
||+ .++..|. ....+.|. +.+++.+++++.+.+
T Consensus 101 Pt~-~~~~~G~-~~~~~~G~-~~~~l~~~l~~~~~~ 133 (139)
T 3d22_A 101 PTF-FFLRDGQ-QVDKLVGA-NKPELHKKITAILDS 133 (139)
T ss_dssp SEE-EEEETTE-EEEEEESC-CHHHHHHHHHHHHHT
T ss_pred cEE-EEEcCCe-EEEEEeCC-CHHHHHHHHHHHhcc
Confidence 999 5555443 34445676 889999999998754
No 209
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.29 E-value=1.5e-12 Score=98.52 Aligned_cols=100 Identities=16% Similarity=0.082 Sum_probs=80.4
Q ss_pred ccccCCCCceeeeeeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeC---------CCcccchhHHHH
Q 023747 19 LISNLPTTSLELLKVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDI---------ADEDLAKPFLTL 88 (278)
Q Consensus 19 ~v~~~~~~~~~~~~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~---------~~~~~~~~l~~~ 88 (278)
++.++..++...+ +. +++|.||++| ++|+.+.|.|.+++++++ +.|+.||+ +.. +.++++
T Consensus 18 v~~l~~~~~~~~~---~~--~vlv~F~a~wC~~C~~~~p~l~~l~~~~~--v~~~~vd~~~~~~~~~~d~~---~~l~~~ 87 (135)
T 3emx_A 18 LIYITPEEFRQLL---QG--DAILAVYSKTCPHCHRDWPQLIQASKEVD--VPIVMFIWGSLIGERELSAA---RLEMNK 87 (135)
T ss_dssp EEECCHHHHHHHH---TS--SEEEEEEETTCHHHHHHHHHHHHHHTTCC--SCEEEEEECTTCCHHHHHHH---HHHHHH
T ss_pred eeecCHHHHHHHh---CC--cEEEEEECCcCHhhhHhChhHHHHHHHCC--CEEEEEECCCchhhhhhhhh---HHHHHH
Confidence 4555555554433 23 8999999999 999999999999999987 99999999 656 899999
Q ss_pred cCCCCCCceEEEEecCCcceeecCCCCCChHHHHHHHHHHhcC
Q 023747 89 FGLEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHG 131 (278)
Q Consensus 89 ~~i~~~~Ptl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~ 131 (278)
|+|.++ ||+ .++++|. ....+.|..+.+.+.+++++.+++
T Consensus 88 ~~v~~~-Pt~-~~~~~G~-~v~~~~G~~~~~~~~~~i~~~~~~ 127 (135)
T 3emx_A 88 AGVEGT-PTL-VFYKEGR-IVDKLVGATPWSLKVEKAREIYGG 127 (135)
T ss_dssp HTCCSS-SEE-EEEETTE-EEEEEESCCCHHHHHHHHHHHC--
T ss_pred cCCcee-CeE-EEEcCCE-EEEEEeCCCCHHHHHHHHHHHhCC
Confidence 999999 999 6666443 344568999999999999998754
No 210
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.28 E-value=8.1e-12 Score=86.05 Aligned_cols=81 Identities=11% Similarity=0.166 Sum_probs=71.2
Q ss_pred ceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCceEEEEecCCcceeecCCCCCC
Q 023747 39 LDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFDNKAISKFLLESDLT 117 (278)
Q Consensus 39 ~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Ptl~~~~~~~~~~~~~~~g~~~ 117 (278)
..++.||++| ++|+.+.|.++++++++.+.+.|..+|++++ +.++++|||.++ ||+ .+ +|. . .+.|..+
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~---~~~~~~~~v~~~-Pt~-~~-~G~-~---~~~G~~~ 72 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGDKIDVEKIDIMVD---REKAIEYGLMAV-PAI-AI-NGV-V---RFVGAPS 72 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCSSCCEEEECTTTC---GGGGGGTCSSCS-SEE-EE-TTT-E---EEECSSC
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcCCeEEEEEECCCC---HHHHHhCCceee-CEE-EE-CCE-E---EEccCCC
Confidence 4689999999 9999999999999999998899999999998 899999999999 999 55 433 2 3468889
Q ss_pred hHHHHHHHHHHh
Q 023747 118 PSNIEEFCSRLL 129 (278)
Q Consensus 118 ~~~i~~fi~~~~ 129 (278)
.+++.+++++.+
T Consensus 73 ~~~l~~~l~~~l 84 (85)
T 1nho_A 73 REELFEAINDEM 84 (85)
T ss_dssp CHHHHHHHHHHC
T ss_pred HHHHHHHHHHHh
Confidence 999999998864
No 211
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.28 E-value=3.7e-12 Score=94.01 Aligned_cols=100 Identities=14% Similarity=0.137 Sum_probs=72.8
Q ss_pred ccccCCCCceeeeeeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCce
Q 023747 19 LISNLPTTSLELLKVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNT 97 (278)
Q Consensus 19 ~v~~~~~~~~~~~~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Pt 97 (278)
++.++..++...+...+.+.+++|.||++| ++|+.+.|.++++|++|.+ +.|++||+++. +++|+|.+. ||
T Consensus 5 v~~it~~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~~-v~f~kvd~d~~------~~~~~v~~~-PT 76 (118)
T 3evi_A 5 LREISGNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFPE-TKFVKAIVNSC------IQHYHDNCL-PT 76 (118)
T ss_dssp CEECCGGGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCTT-SEEEEEEGGGT------STTCCGGGC-SE
T ss_pred eEEeCHHHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCCC-CEEEEEEhHHh------HHHCCCCCC-CE
Confidence 445555555444433333448999999999 9999999999999999976 99999998865 378999999 99
Q ss_pred EEEEecCCcc-eeec----CCC-CCChHHHHHHHHH
Q 023747 98 VVTAFDNKAI-SKFL----LES-DLTPSNIEEFCSR 127 (278)
Q Consensus 98 l~~~~~~~~~-~~~~----~~g-~~~~~~i~~fi~~ 127 (278)
+ .+|.+|.. .++. ..| ..+.+++..++.+
T Consensus 77 ~-~~fk~G~~v~~~~G~~~~gg~~~~~~~le~~L~~ 111 (118)
T 3evi_A 77 I-FVYKNGQIEAKFIGIIECGGINLKLEELEWKLAE 111 (118)
T ss_dssp E-EEEETTEEEEEEESTTTTTCSSCCHHHHHHHHHT
T ss_pred E-EEEECCEEEEEEeChhhhCCCCCCHHHHHHHHHH
Confidence 9 55544432 2221 111 3688999888876
No 212
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.28 E-value=4.9e-12 Score=94.59 Aligned_cols=109 Identities=15% Similarity=0.096 Sum_probs=84.4
Q ss_pred cccCCCCceeeeeee-ecCCceEEEEEeCc-cchHHHHHHH---HHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCC
Q 023747 20 ISNLPTTSLELLKVS-QIDTLDMVYVFAKA-DDLKSLLEPL---EDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEES 94 (278)
Q Consensus 20 v~~~~~~~~~~~~~~-~~~~~~~v~F~~~~-~~c~~~~~~~---~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~ 94 (278)
+.++..++...+... ..+++++|.||++| ++|+.+.|.+ .++++.+++.+.++.+|++...+ ..++++|+|.++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~-~~~~~~~~v~~~ 87 (130)
T 2kuc_A 9 IAFRELSFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRHFVNLKMDMEKGEG-VELRKKYGVHAY 87 (130)
T ss_dssp CCCBCCCHHHHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHHSEEEEECSSSTTH-HHHHHHTTCCSS
T ss_pred CCcccCCHHHHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcCeEEEEEecCCcch-HHHHHHcCCCCC
Confidence 334455555443322 35678999999999 9999999999 78888877779999999984211 789999999999
Q ss_pred CceEEEEecCCcceeecCCCCCChHHHHHHHHHHhcC
Q 023747 95 KNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHG 131 (278)
Q Consensus 95 ~Ptl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~ 131 (278)
||+ .+++.++...+.+.|..+.+++.+++++.+.+
T Consensus 88 -Pt~-~~~d~~G~~~~~~~G~~~~~~l~~~l~~~~~~ 122 (130)
T 2kuc_A 88 -PTL-LFINSSGEVVYRLVGAEDAPELLKKVKLGVES 122 (130)
T ss_dssp -CEE-EEECTTSCEEEEEESCCCHHHHHHHHHHHHSC
T ss_pred -CEE-EEECCCCcEEEEecCCCCHHHHHHHHHHHHHh
Confidence 999 77753334455568899999999999998754
No 213
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.28 E-value=2.1e-11 Score=88.66 Aligned_cols=87 Identities=14% Similarity=0.135 Sum_probs=73.9
Q ss_pred cCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCceEEEEecCCcceeecCCC
Q 023747 36 IDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFDNKAISKFLLES 114 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Ptl~~~~~~~~~~~~~~~g 114 (278)
.+++++|.||++| ++|+.+.|.+.++++.+.+ +.|+.+|++.. +.++++|+|.++ ||+ .++.+|. ....+.|
T Consensus 25 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-v~~~~v~~~~~---~~~~~~~~v~~~-Pt~-~~~~~G~-~~~~~~g 97 (113)
T 1ti3_A 25 SQKLIVVDFTASWCPPCKMIAPIFAELAKKFPN-VTFLKVDVDEL---KAVAEEWNVEAM-PTF-IFLKDGK-LVDKTVG 97 (113)
T ss_dssp SSSEEEEEEECSSCHHHHHHHHHHHHHHHHCSS-EEEEEEETTTC---HHHHHHHHCSST-TEE-EEEETTE-EEEEEEC
T ss_pred cCCeEEEEEECCCCHHHHHHHHHHHHHHHhCCC-cEEEEEEcccc---HHHHHhCCCCcc-cEE-EEEeCCE-EEEEEec
Confidence 4678999999999 9999999999999999984 99999999998 899999999999 999 5555443 2333456
Q ss_pred CCChHHHHHHHHHHhc
Q 023747 115 DLTPSNIEEFCSRLLH 130 (278)
Q Consensus 115 ~~~~~~i~~fi~~~~~ 130 (278)
.+.+++.+++++++.
T Consensus 98 -~~~~~l~~~l~~~~~ 112 (113)
T 1ti3_A 98 -ADKDGLPTLVAKHAT 112 (113)
T ss_dssp -CCTTHHHHHHHHHHH
T ss_pred -CCHHHHHHHHHHhhc
Confidence 688999999998763
No 214
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.28 E-value=3.7e-12 Score=96.04 Aligned_cols=86 Identities=9% Similarity=0.106 Sum_probs=72.3
Q ss_pred CCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCceEEEEe---cCCcceeecC
Q 023747 37 DTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAF---DNKAISKFLL 112 (278)
Q Consensus 37 ~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Ptl~~~~---~~~~~~~~~~ 112 (278)
+++++|.||++| ++|+.+.|.|+++++.+ .+.|+.||++.. ..++++|+|.++ ||+ .++ ++.......+
T Consensus 40 ~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~--~v~~~~vd~~~~---~~l~~~~~v~~~-Pt~-~~~~~~~g~g~~~~~~ 112 (133)
T 3cxg_A 40 NSSIVIKFGAVWCKPCNKIKEYFKNQLNYY--YVTLVDIDVDIH---PKLNDQHNIKAL-PTF-EFYFNLNNEWVLVHTV 112 (133)
T ss_dssp CSEEEEEEECTTCHHHHHTHHHHHGGGGTE--ECEEEEEETTTC---HHHHHHTTCCSS-SEE-EEEEEETTEEEEEEEE
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHhc--CEEEEEEeccch---HHHHHhcCCCCC-CEE-EEEEecCCCeEEEEEE
Confidence 468999999999 99999999999999888 499999999998 899999999999 999 555 4432233445
Q ss_pred CCCCChHHHHHHHHHHhc
Q 023747 113 ESDLTPSNIEEFCSRLLH 130 (278)
Q Consensus 113 ~g~~~~~~i~~fi~~~~~ 130 (278)
.|. +.++|.+++++.+.
T Consensus 113 ~G~-~~~~l~~~l~~~l~ 129 (133)
T 3cxg_A 113 EGA-NQNDIEKAFQKYCL 129 (133)
T ss_dssp ESC-CHHHHHHHHHHHSE
T ss_pred cCC-CHHHHHHHHHHHHH
Confidence 676 89999999998763
No 215
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.27 E-value=3.5e-11 Score=88.12 Aligned_cols=87 Identities=15% Similarity=0.160 Sum_probs=74.4
Q ss_pred cCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCceEEEEecCCcceeecCCC
Q 023747 36 IDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFDNKAISKFLLES 114 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Ptl~~~~~~~~~~~~~~~g 114 (278)
.+++++|.||++| ++|+.+.|.|+++++.+++ +.|+.+|++.. +.++++|+|.++ ||+ .++.+|.. ...+.|
T Consensus 27 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~v~~~~~---~~~~~~~~v~~~-Pt~-~~~~~g~~-~~~~~g 99 (118)
T 2vm1_A 27 TGKLVIIDFTASWCGPCRVIAPVFAEYAKKFPG-AIFLKVDVDEL---KDVAEAYNVEAM-PTF-LFIKDGEK-VDSVVG 99 (118)
T ss_dssp HTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTS---HHHHHHTTCCSB-SEE-EEEETTEE-EEEEES
T ss_pred CCCEEEEEEECCCCHhHHHHhHHHHHHHHHCCC-cEEEEEEcccC---HHHHHHcCCCcC-cEE-EEEeCCeE-EEEecC
Confidence 4778999999999 9999999999999999984 99999999998 899999999999 999 55554432 333466
Q ss_pred CCChHHHHHHHHHHhc
Q 023747 115 DLTPSNIEEFCSRLLH 130 (278)
Q Consensus 115 ~~~~~~i~~fi~~~~~ 130 (278)
.+.+++.+++.+.++
T Consensus 100 -~~~~~l~~~l~~~~~ 114 (118)
T 2vm1_A 100 -GRKDDIHTKIVALMG 114 (118)
T ss_dssp -CCHHHHHHHHHHHHC
T ss_pred -CCHHHHHHHHHHHhc
Confidence 588999999999874
No 216
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.27 E-value=2.8e-11 Score=94.00 Aligned_cols=107 Identities=16% Similarity=0.291 Sum_probs=80.7
Q ss_pred eEEEcccchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-C-CCCC-----------
Q 023747 150 VQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-E-HPKL----------- 216 (278)
Q Consensus 150 v~~l~~~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~-~~~~----------- 216 (278)
+..+++..+.--- -.+++++|.||++||++|..+.+.+.+++..+... ++.++.|+++.. + ..++
T Consensus 19 l~~~~g~~~~l~~-~~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~-~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~ 96 (165)
T 3or5_A 19 GVTVDGKPFSSAS-LKGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASR-GFTFVGIAVNEQLPNVKNYMKTQGIIYPVM 96 (165)
T ss_dssp EECTTSCEEEGGG-GTTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT-TEEEEEEECSCCHHHHHHHHHHHTCCSCEE
T ss_pred eeCCCCCEechhH-cCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccC-CeEEEEEECCCCHHHHHHHHHHcCCCCceE
Confidence 4444444443221 24789999999999999999999999999999864 599999998875 2 2344
Q ss_pred ----------------CCcCCCeEEEEeCCCccCceEecCCCCHHHHHHHHHHHhcccC
Q 023747 217 ----------------QVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKEKD 259 (278)
Q Consensus 217 ----------------~i~~~Ptl~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~~~~~ 259 (278)
++..+|+++++..++.+ ...+.|..+.+.+.++|++.++...
T Consensus 97 ~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i-~~~~~g~~~~~~l~~~l~~~l~~~~ 154 (165)
T 3or5_A 97 MATPELIRAFNGYIDGGITGIPTSFVIDASGNV-SGVIVGPRSKADFDRIVKMALGAKA 154 (165)
T ss_dssp ECCHHHHHHHHTTSTTCSCSSSEEEEECTTSBE-EEEECSCCCHHHHHHHHHHHHC---
T ss_pred ecCHHHHHHHhhhhccCCCCCCeEEEECCCCcE-EEEEcCCCCHHHHHHHHHHHHhhhc
Confidence 78999999999544433 2378899999999999999987544
No 217
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.26 E-value=2.4e-11 Score=93.26 Aligned_cols=93 Identities=12% Similarity=0.174 Sum_probs=74.4
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-------------------------CC-CCCC-
Q 023747 165 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-------------------------EH-PKLQ- 217 (278)
Q Consensus 165 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-------------------------~~-~~~~- 217 (278)
.+++++|.||++||++|..+.|.+.+++..++.. ++.++.|+++.. .+ ..|+
T Consensus 23 ~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~-~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (151)
T 3raz_A 23 KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKG-SVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFMKTYGN 101 (151)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTT-TEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHHHTTTC
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccC-CeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHHHHhCC
Confidence 4789999999999999999999999999999653 699999998631 12 3566
Q ss_pred -CcCCCeEEEEeCCCccCceEecCCCCHHHHHHHHHHHhcccC
Q 023747 218 -VEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKEKD 259 (278)
Q Consensus 218 -i~~~Ptl~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~~~~~ 259 (278)
+..+|+++++..++.+ ..++.|..+.+.|.++|++......
T Consensus 102 ~v~~~P~~~lid~~G~i-~~~~~g~~~~~~l~~~l~~l~~~~~ 143 (151)
T 3raz_A 102 TVGVLPFTVVEAPKCGY-RQTITGEVNEKSLTDAVKLAHSKCR 143 (151)
T ss_dssp CSCCSSEEEEEETTTTE-EEECCSCCCHHHHHHHHHHHHTC--
T ss_pred ccCCCCEEEEECCCCcE-EEEECCCCCHHHHHHHHHHHHHHhh
Confidence 8999999999544443 3378899999999999998876543
No 218
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.26 E-value=3.1e-11 Score=98.97 Aligned_cols=89 Identities=12% Similarity=0.059 Sum_probs=76.3
Q ss_pred ecCCce-EEEEEeCc-cchHHHHHHHHHHHHHhc----CceEEEEEeCCCcccchhHHHHcCCCCCCceEEEEecCCcce
Q 023747 35 QIDTLD-MVYVFAKA-DDLKSLLEPLEDIARNFK----GKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFDNKAIS 108 (278)
Q Consensus 35 ~~~~~~-~v~F~~~~-~~c~~~~~~~~~la~~~~----~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Ptl~~~~~~~~~~ 108 (278)
..++++ ++.||++| ++|+.+.|.|.+++..+. +.+.|+.||++.+ +.++++|+|.++ ||+ .++..|. .
T Consensus 131 ~~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~~---~~l~~~~~v~~~-Pt~-~~~~~G~-~ 204 (226)
T 1a8l_A 131 NIDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEY---PEWADQYNVMAV-PKI-VIQVNGE-D 204 (226)
T ss_dssp TCCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGGC---HHHHHHTTCCSS-CEE-EEEETTE-E
T ss_pred hcCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEcccC---HHHHHhCCCccc-CeE-EEEeCCc-e
Confidence 344556 99999999 999999999999999998 5799999999988 899999999999 999 6665543 3
Q ss_pred eecCCCCCChHHHHHHHHHHh
Q 023747 109 KFLLESDLTPSNIEEFCSRLL 129 (278)
Q Consensus 109 ~~~~~g~~~~~~i~~fi~~~~ 129 (278)
...+.|..+.+++.+|+.+.+
T Consensus 205 ~~~~~G~~~~~~l~~~l~~~l 225 (226)
T 1a8l_A 205 RVEFEGAYPEKMFLEKLLSAL 225 (226)
T ss_dssp EEEEESCCCHHHHHHHHHHHH
T ss_pred eEEEcCCCCHHHHHHHHHHhh
Confidence 445689999999999998864
No 219
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.25 E-value=2.1e-12 Score=95.08 Aligned_cols=92 Identities=11% Similarity=0.216 Sum_probs=69.5
Q ss_pred eeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCc-ccchhHHHHcCCCCCCceEEEEecCCccee
Q 023747 32 KVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADE-DLAKPFLTLFGLEESKNTVVTAFDNKAISK 109 (278)
Q Consensus 32 ~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~-~~~~~l~~~~~i~~~~Ptl~~~~~~~~~~~ 109 (278)
...+.+++++|+||++| ++|+.+.|.|.++++++...+.++.++.... +..+.++++|||.++ ||+ .++.+|. ..
T Consensus 24 ~~~~~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~-Pt~-~~~~~G~-~~ 100 (118)
T 1zma_A 24 EALDKKETATFFIGRKTCPYCRKFAGTLSGVVAETKAHIYFINSEEPSQLNDLQAFRSRYGIPTV-PGF-VHITDGQ-IN 100 (118)
T ss_dssp HHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCCCCEEEETTCGGGHHHHHHHHHHHTCCSS-CEE-EEEETTE-EE
T ss_pred HHHhCCCeEEEEEECCCCccHHHHHHHHHHHHHhcCCeEEEEECCCcCcHHHHHHHHHHcCCCCC-CeE-EEEECCE-EE
Confidence 33456789999999999 9999999999999999886666653332210 111579999999999 999 5555443 33
Q ss_pred ecCCCCCChHHHHHHHH
Q 023747 110 FLLESDLTPSNIEEFCS 126 (278)
Q Consensus 110 ~~~~g~~~~~~i~~fi~ 126 (278)
..+.|..+.++|.+|++
T Consensus 101 ~~~~G~~~~~~l~~~l~ 117 (118)
T 1zma_A 101 VRCDSSMSAQEIKDFAG 117 (118)
T ss_dssp EECCTTCCHHHHHHHHT
T ss_pred EEecCCCCHHHHHHHhh
Confidence 45688999999999874
No 220
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.23 E-value=3.6e-11 Score=88.55 Aligned_cols=87 Identities=16% Similarity=0.113 Sum_probs=72.0
Q ss_pred ecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCceEEEEecC----Cccee
Q 023747 35 QIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFDN----KAISK 109 (278)
Q Consensus 35 ~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Ptl~~~~~~----~~~~~ 109 (278)
+.+++++|.||++| ++|+.+.|.|.++++++ +.+.|+.||++.. +.++++|+|.++ ||+ .+++. |. ..
T Consensus 21 ~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~~v~~~~vd~~~~---~~~~~~~~i~~~-Pt~-~~~~~~~~~G~-~~ 93 (118)
T 2f51_A 21 EAPGLVLVDFFATWCGPCQRLGQILPSIAEAN-KDVTFIKVDVDKN---GNAADAYGVSSI-PAL-FFVKKEGNEIK-TL 93 (118)
T ss_dssp HCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEETTTC---HHHHHHTTCCSS-SEE-EEEEEETTEEE-EE
T ss_pred hCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC-CCeEEEEEECCCC---HHHHHhcCCCCC-CEE-EEEeCCCCcce-EE
Confidence 45789999999999 99999999999999999 6699999999999 899999999999 999 55554 22 23
Q ss_pred ecCCCCCChHHHHHHHHHHh
Q 023747 110 FLLESDLTPSNIEEFCSRLL 129 (278)
Q Consensus 110 ~~~~g~~~~~~i~~fi~~~~ 129 (278)
..+.|.. .++|.+.+.++.
T Consensus 94 ~~~~G~~-~~~l~~~~~~~~ 112 (118)
T 2f51_A 94 DQFVGAD-VSRIKADIEKFK 112 (118)
T ss_dssp EEEESCC-HHHHHHHHHHHC
T ss_pred EeecCCC-HHHHHHHHHHhh
Confidence 3345554 456999998865
No 221
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.23 E-value=4.3e-11 Score=90.16 Aligned_cols=89 Identities=8% Similarity=0.084 Sum_probs=74.3
Q ss_pred CCceEEEEEeCc-cchHHHHHHH---HHHHHHhcCceEEEEEeCCCc-ccchhHHHHcCCCCCCceEEEEecCCccee--
Q 023747 37 DTLDMVYVFAKA-DDLKSLLEPL---EDIARNFKGKIMFTAVDIADE-DLAKPFLTLFGLEESKNTVVTAFDNKAISK-- 109 (278)
Q Consensus 37 ~~~~~v~F~~~~-~~c~~~~~~~---~~la~~~~~~v~f~~vd~~~~-~~~~~l~~~~~i~~~~Ptl~~~~~~~~~~~-- 109 (278)
+++++|.||++| ++|+.+.|.+ .++++.+++ +.|+.||++.. +....++++|+|.++ ||+ .+++.++...
T Consensus 31 ~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~~-~~~~~vd~~~~~~~~~~l~~~~~v~~~-Pt~-~~~d~~G~~v~~ 107 (134)
T 2fwh_A 31 GKPVMLDLYADWCVACKEFEKYTFSDPQVQKALAD-TVLLQANVTANDAQDVALLKHLNVLGL-PTI-LFFDGQGQEHPQ 107 (134)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTTT-SEEEEEECTTCCHHHHHHHHHTTCCSS-SEE-EEECTTSCBCGG
T ss_pred CCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC-cEEEEEeCCCCcchHHHHHHHcCCCCC-CEE-EEECCCCCEeee
Confidence 678999999999 9999999999 999999987 99999999542 112789999999999 999 7774333333
Q ss_pred ecCCCCCChHHHHHHHHHH
Q 023747 110 FLLESDLTPSNIEEFCSRL 128 (278)
Q Consensus 110 ~~~~g~~~~~~i~~fi~~~ 128 (278)
+.+.|..+.++|.+++++.
T Consensus 108 ~~~~G~~~~~~l~~~l~~~ 126 (134)
T 2fwh_A 108 ARVTGFMDAETFSAHLRDR 126 (134)
T ss_dssp GCBCSCCCHHHHHHHHHHC
T ss_pred eeeeeccCHHHHHHHHHhc
Confidence 5678999999999999875
No 222
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.23 E-value=5.1e-11 Score=91.30 Aligned_cols=92 Identities=20% Similarity=0.389 Sum_probs=74.7
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-----------------------CC-CCCCCcC
Q 023747 165 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-----------------------EH-PKLQVEE 220 (278)
Q Consensus 165 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-----------------------~~-~~~~i~~ 220 (278)
.+++++|.||++||++|..+.+.+.+++..+... ++.++.|+++.. .+ ..|++..
T Consensus 25 ~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~-~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 103 (151)
T 2f9s_A 25 KGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQ-GVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVSP 103 (151)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG-TEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTTCCS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccC-CeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcCCCC
Confidence 4789999999999999999999999999999753 488888888652 23 3689999
Q ss_pred CCeEEEE-eCCCccCceEecCCCCHHHHHHHHHHHhcccC
Q 023747 221 YPTLLFY-PAGDKANPIKVSARSSSKNIAAFIKEQLKEKD 259 (278)
Q Consensus 221 ~Ptl~~f-~~g~~~~~~~~~g~~~~~~l~~~i~~~~~~~~ 259 (278)
+|+++++ ++|+.. ..+.|..+.+.|.++|.+.+....
T Consensus 104 ~P~~~lid~~G~i~--~~~~G~~~~~~l~~~l~~ll~~~~ 141 (151)
T 2f9s_A 104 LPTTFLINPEGKVV--KVVTGTMTESMIHDYMNLIKPGET 141 (151)
T ss_dssp SCEEEEECTTSEEE--EEEESCCCHHHHHHHHHHHSCC--
T ss_pred CCeEEEECCCCcEE--EEEeCCCCHHHHHHHHHHHHhhhh
Confidence 9999999 455433 367899999999999999886544
No 223
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.23 E-value=7.5e-12 Score=98.07 Aligned_cols=94 Identities=12% Similarity=0.100 Sum_probs=67.5
Q ss_pred cccchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCC---CcCCCeEEEEe
Q 023747 154 VGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQ---VEEYPTLLFYP 228 (278)
Q Consensus 154 ~~~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~---i~~~Ptl~~f~ 228 (278)
+.+.+..+....+++++|.|||+||++|+.+.|.+.+++..+. ++.|..+|.+.+ +. .+|. +.++||+++|+
T Consensus 42 ~~~~~~~l~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~---~v~~~~v~~d~~~~~~~~~~~~~v~~iPt~i~~~ 118 (167)
T 1z6n_A 42 PSALTERLQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQP---NIELAIISKGRAEDDLRQRLALERIAIPLVLVLD 118 (167)
T ss_dssp CHHHHHHHHTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT---TEEEEEECHHHHHHHTTTTTTCSSCCSSEEEEEC
T ss_pred CHHHHHHHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHCC---CcEEEEEECCCCHHHHHHHHHcCCCCcCeEEEEC
Confidence 4444444322346789999999999999999999999998875 599999998877 44 4675 99999999998
Q ss_pred CCCccCceEecCCCCHHHHHHHHHH
Q 023747 229 AGDKANPIKVSARSSSKNIAAFIKE 253 (278)
Q Consensus 229 ~g~~~~~~~~~g~~~~~~l~~~i~~ 253 (278)
+|++.. .++ |... ..+.+.+.+
T Consensus 119 ~~G~~~-~~~-g~~p-~~~~~~i~~ 140 (167)
T 1z6n_A 119 EEFNLL-GRF-VERP-QAVLDGGPQ 140 (167)
T ss_dssp TTCCEE-EEE-ESSC-HHHHHHCHH
T ss_pred CCCCEE-EEE-cCCC-HHHHHhHHH
Confidence 864431 134 4443 334444443
No 224
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.21 E-value=4.7e-11 Score=90.43 Aligned_cols=84 Identities=12% Similarity=0.324 Sum_probs=70.6
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCC-------------------------C-CC-CCCC
Q 023747 165 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA-------------------------N-EH-PKLQ 217 (278)
Q Consensus 165 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~-------------------------~-~~-~~~~ 217 (278)
.+++++|.||++||++|..+.+.+.++++.+... ++.++.|+++. + .+ ..|+
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 111 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSD-SVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGELMKEYH 111 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCS-SEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSSSHHHHHTT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCC-CEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCchhHHHhcC
Confidence 5789999999999999999999999999999843 69999999864 2 33 4789
Q ss_pred CcCCCeEEEE-eCCCccCceEecCCCCHHHHHHHH
Q 023747 218 VEEYPTLLFY-PAGDKANPIKVSARSSSKNIAAFI 251 (278)
Q Consensus 218 i~~~Ptl~~f-~~g~~~~~~~~~g~~~~~~l~~~i 251 (278)
+..+|+++++ ++|+.. ..+.|..+.+.|.++|
T Consensus 112 v~~~P~~~lid~~G~i~--~~~~g~~~~~~l~~~l 144 (145)
T 3erw_A 112 IITIPTSFLLNEKGEIE--KTKIGPMTAEQLKEWT 144 (145)
T ss_dssp CCEESEEEEECTTCCEE--EEEESCCCHHHHHHHH
T ss_pred cCccCeEEEEcCCCcEE--EEEcCCcCHHHHHHhh
Confidence 9999999999 555543 3788999999999887
No 225
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.21 E-value=9.5e-11 Score=90.54 Aligned_cols=92 Identities=15% Similarity=0.246 Sum_probs=74.6
Q ss_pred CCCcEEEEEECCCChhHHH-HHHHHHHHHHHhcCCCceEEEEEeCC----------------------------CC-C--
Q 023747 165 SHKDVLLEVYTPWCVTCET-TSKQIEKLAKHFKGLDNLVIAKIDAS----------------------------AN-E-- 212 (278)
Q Consensus 165 ~~~~~~v~f~~~~c~~c~~-~~~~~~~~a~~~~~~~~~~~~~vd~~----------------------------~~-~-- 212 (278)
.+++++|.||++||++|.. +.|.+.+++..+++. ++.+..|+++ .. .
T Consensus 29 ~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~-~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 107 (160)
T 3lor_A 29 RGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDES-QVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKFPVAVDMPREGQ 107 (160)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTT-TEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCTTC
T ss_pred CCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcC-CcEEEEEeccccccccCCHHHHHHHHHHcCCCCcEEECCccccc
Confidence 4789999999999999999 699999999999864 5888888862 12 2
Q ss_pred ----C-CCCCCcCCCeEEEEeCCCccCceEecCCCCHHHHHHHHHHHhccc
Q 023747 213 ----H-PKLQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKEK 258 (278)
Q Consensus 213 ----~-~~~~i~~~Ptl~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~~~~ 258 (278)
+ ..|++..+|+++++..++++ ..++.|..+.+.+.++|++.+...
T Consensus 108 ~~~~~~~~~~v~~~P~~~lid~~G~i-~~~~~g~~~~~~l~~~i~~ll~~~ 157 (160)
T 3lor_A 108 RIPSTMKKYRLEGTPSIILADRKGRI-RQVQFGQVDDFVLGLLLGSLLSET 157 (160)
T ss_dssp SSCHHHHHTTCCSSSEEEEECTTSBE-EEEEESCCCHHHHHHHHHHHHTCC
T ss_pred hhhhHHHhcccCccceEEEECCCCcE-EEEecCcCCHHHHHHHHHHHHhcc
Confidence 3 36799999999999644444 337789999999999999988653
No 226
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.21 E-value=1.1e-11 Score=83.79 Aligned_cols=73 Identities=18% Similarity=0.358 Sum_probs=60.5
Q ss_pred EEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCC-CCCCCcCCCeEEEEeCCCccCceEecCCC-CHHH
Q 023747 169 VLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASANEH-PKLQVEEYPTLLFYPAGDKANPIKVSARS-SSKN 246 (278)
Q Consensus 169 ~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~~~-~~~~i~~~Ptl~~f~~g~~~~~~~~~g~~-~~~~ 246 (278)
..|.||++||++|+.+.|.+++++..+.. ++.++.+| ..++ .+|++.++|++++ +|+.. ..|.. +.+.
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l~~~~~~~~~--~~~~~~v~--~~~~~~~~~v~~~Pt~~~--~G~~~----~~G~~~~~~~ 71 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNAREAVKELGI--DAEFEKIK--EMDQILEAGLTALPGLAV--DGELK----IMGRVASKEE 71 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHHHHHHHHTTC--CEEEEEEC--SHHHHHHHTCSSSSCEEE--TTEEE----ECSSCCCHHH
T ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHcCC--ceEEEEec--CHHHHHHCCCCcCCEEEE--CCEEE----EcCCCCCHHH
Confidence 46899999999999999999999999976 69999998 2244 5899999999998 66532 33886 8999
Q ss_pred HHHHH
Q 023747 247 IAAFI 251 (278)
Q Consensus 247 l~~~i 251 (278)
|.+||
T Consensus 72 l~~~l 76 (77)
T 1ilo_A 72 IKKIL 76 (77)
T ss_dssp HHHHC
T ss_pred HHHHh
Confidence 98876
No 227
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.19 E-value=4e-11 Score=93.06 Aligned_cols=104 Identities=17% Similarity=0.297 Sum_probs=78.3
Q ss_pred CeEEEcccchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCC------------------
Q 023747 149 NVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA------------------ 210 (278)
Q Consensus 149 ~v~~l~~~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~------------------ 210 (278)
.+..++++.+.... ..+++++|.||++||++|+.+.|.+.+++..++.. ++.+..|+++.
T Consensus 22 ~l~~~~g~~~~~~~-~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~-~~~vv~v~~~~~~~~~~~~~~~~~~~~~~ 99 (164)
T 2h30_A 22 TMKTADNRPASVYL-KKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFS-SANLITVASPGFLHEKKDGEFQKWYAGLN 99 (164)
T ss_dssp TCEETTSSBGGGGC-CTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGT-TSEEEEEECTTSTTCCCTTHHHHHHTTSC
T ss_pred ccCCCCCCEeeHHH-hCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccC-CcEEEEEEcCCCccccCHHHHHHHHHhCC
Confidence 45666676665432 35789999999999999999999999999998654 46666666431
Q ss_pred ----------C-CC-CCCCCcCCCeEEEE-eCCCccCceEecCCCCHHHHHHHHHHHhc
Q 023747 211 ----------N-EH-PKLQVEEYPTLLFY-PAGDKANPIKVSARSSSKNIAAFIKEQLK 256 (278)
Q Consensus 211 ----------~-~~-~~~~i~~~Ptl~~f-~~g~~~~~~~~~g~~~~~~l~~~i~~~~~ 256 (278)
+ ++ ..|++..+|+++++ ++|+.. ..+.|..+.+.|.++|++.+.
T Consensus 100 ~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~--~~~~g~~~~~~l~~~i~~~~~ 156 (164)
T 2h30_A 100 YPKLPVVTDNGGTIAQNLNISVYPSWALIGKDGDVQ--RIVKGSINEAQALALIRNPNA 156 (164)
T ss_dssp CTTSCEEECTTCHHHHHTTCCSSSEEEEECTTSCEE--EEEESCCCHHHHHHHHHCTTC
T ss_pred CCcceEEEcCchHHHHHcCCCccceEEEECCCCcEE--EEEcCCCCHHHHHHHHHHHHH
Confidence 1 12 24588999999999 555543 367899999999999988765
No 228
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=99.19 E-value=4.5e-12 Score=102.13 Aligned_cols=115 Identities=15% Similarity=0.246 Sum_probs=79.7
Q ss_pred hhHHHHcCCCCCCceEEEEecCCcceeecCC-CCCChHHHHHHHHHHhcCcccccccCCCCCCCCCCCeEEEcccchHHH
Q 023747 83 KPFLTLFGLEESKNTVVTAFDNKAISKFLLE-SDLTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIVVGKTFDDL 161 (278)
Q Consensus 83 ~~l~~~~~i~~~~Ptl~~~~~~~~~~~~~~~-g~~~~~~i~~fi~~~~~~~~~~~~~s~~~p~~~~~~v~~l~~~~~~~~ 161 (278)
...++.+||.+. |++ .+ +++ |... +..+.+++.+|++++++ +.+++.++++|..... ...+.++..+
T Consensus 40 ~~~a~~~gi~gv-P~f-vi-ngk----~~~~~~~~~~~~~~~f~~~~~~--l~~~L~s~~~p~~~~~---~~~g~~y~~l 107 (197)
T 1un2_A 40 EKAAADVQLRGV-PAM-FV-NGK----YQLNPQGMDTSNMDVFVQQYAD--TVKYLSEKKGGGTGAQ---YEDGKQYTTL 107 (197)
T ss_dssp HHHHHHTTCCSS-SEE-EE-TTT----EEECGGGSCCSSHHHHHHHHHH--HHHHHTC------------CCBTTTEEEC
T ss_pred HHHHHHcCCCcC-CEE-EE-cce----EecCccccccccHHHHHHHHHH--HHHHHHhCcccccccc---cCCCCCceEc
Confidence 467889999999 999 43 332 3233 23555678888888876 7788888888765322 2244555544
Q ss_pred hh-cCCCcEEEEEECCCChhHHHHHHHH---HHHHHHhcCCCceEEEEEeCCCC
Q 023747 162 VL-NSHKDVLLEVYTPWCVTCETTSKQI---EKLAKHFKGLDNLVIAKIDASAN 211 (278)
Q Consensus 162 i~-~~~~~~~v~f~~~~c~~c~~~~~~~---~~~a~~~~~~~~~~~~~vd~~~~ 211 (278)
.. ...++++|.||+.||++|+.+.|.+ .++++.+.+ ++.|.+++++.+
T Consensus 108 ~~p~~~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~--~v~~~~~~v~~~ 159 (197)
T 1un2_A 108 EKPVAGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPE--GVKMTKYHVNFM 159 (197)
T ss_dssp SSCCTTCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCT--TCCEEEEECSSS
T ss_pred cCCCCCCCEEEEEECCCChhHHHhCcccccHHHHHHHCCC--CCEEEEeccCcC
Confidence 32 2367899999999999999999999 999999976 799999998754
No 229
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=99.18 E-value=1.3e-10 Score=97.24 Aligned_cols=133 Identities=17% Similarity=0.243 Sum_probs=88.8
Q ss_pred HHHHHHhc-cCCcccccccCCCCceeeeeeeecCCceEEEEEeCc-c-c---hHHHHHHHHHHHHHhcCc---eEEEEEe
Q 023747 5 LLKQATLR-LPKSCTLISNLPTTSLELLKVSQIDTLDMVYVFAKA-D-D---LKSLLEPLEDIARNFKGK---IMFTAVD 75 (278)
Q Consensus 5 ~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~F~~~~-~-~---c~~~~~~~~~la~~~~~~---v~f~~vd 75 (278)
|..++... +|- +..++..|...+ . ..++++.|+... . . ...+...+.++|++|+++ +.|+.+|
T Consensus 104 l~~fi~~~~~Pl---v~e~t~~n~~~~---~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~k~~~~~F~~~d 175 (252)
T 2h8l_A 104 IKKFIQENIFGI---CPHMTEDNKDLI---Q--GKDLLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHKLNFAVAS 175 (252)
T ss_dssp HHHHHHHHSSCS---SCEECTTTHHHH---S--SSSEEEEEECCBTTTBHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEE
T ss_pred HHHHHHhcccCC---eeecccccHhhh---c--CCCeEEEEeecchhhcchhHHHHHHHHHHHHHHccccCceEEEEEEc
Confidence 44555544 322 244556665443 2 335667777543 2 1 235889999999999987 9999999
Q ss_pred CCCcccchhHHHHcCC--C--CCCceEEEEecCCcceeecCCCCCChHH--HHHHHHHHhcCcccccccCCCCCCCCCCC
Q 023747 76 IADEDLAKPFLTLFGL--E--ESKNTVVTAFDNKAISKFLLESDLTPSN--IEEFCSRLLHGTLTPYLKSQPIPDNTNAN 149 (278)
Q Consensus 76 ~~~~~~~~~l~~~~~i--~--~~~Ptl~~~~~~~~~~~~~~~g~~~~~~--i~~fi~~~~~~~~~~~~~s~~~p~~~~~~ 149 (278)
+... ..+++.||+ . .+ |.+ ++++. .+.+|.+.+..+.+. |.+|++++++|++.++++|+++|+.+.++
T Consensus 176 ~~~~---~~~~~~fgl~~~~~~~-P~v-~i~~~-~~~ky~~~~~~t~~~~~i~~F~~~~~~Gkl~~~~kSe~iPe~~~~p 249 (252)
T 2h8l_A 176 RKTF---SHELSDFGLESTAGEI-PVV-AIRTA-KGEKFVMQEEFSRDGKALERFLQDYFDGNLKRYLKSEPIPESNDGA 249 (252)
T ss_dssp TTTT---HHHHGGGTCCCCSCSS-CEE-EEECT-TSCEEECCSCCCTTSHHHHHHHHHHHHTCSCCCC------------
T ss_pred hHHH---HHHHHHcCCCCccCCC-CEE-EEEeC-cCcEecCCcccCcchHHHHHHHHHHHCCCccccccCCCCCCCCCCC
Confidence 9988 789999999 3 46 999 77765 346888888888889 99999999999999999999999876555
Q ss_pred eE
Q 023747 150 VQ 151 (278)
Q Consensus 150 v~ 151 (278)
|+
T Consensus 250 V~ 251 (252)
T 2h8l_A 250 AA 251 (252)
T ss_dssp --
T ss_pred CC
Confidence 54
No 230
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.18 E-value=1.2e-10 Score=89.36 Aligned_cols=89 Identities=12% Similarity=0.241 Sum_probs=71.9
Q ss_pred CcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCC---------------------------CC-CC-CCCC
Q 023747 167 KDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDAS---------------------------AN-EH-PKLQ 217 (278)
Q Consensus 167 ~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~---------------------------~~-~~-~~~~ 217 (278)
++++|.||++||++|....+.+.++++.+ ++.++.|+++ .. .+ ..|+
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l~~l~~~~----~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 106 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGLHRVAEET----GVPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRPHEVAARFK 106 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHHHHHHHHH----CCCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCHHHHHTTSS
T ss_pred CeEEEEEEcccChhHHHHHHHHHHHHHHc----CCeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccchHHHHHHhC
Confidence 89999999999999999999999999999 3778888872 22 33 5789
Q ss_pred CcCCCeEEEEeCCCccCceEecCCCCHHHHHHHHHHHhcccCC
Q 023747 218 VEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKEKDQ 260 (278)
Q Consensus 218 i~~~Ptl~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~~~~~~ 260 (278)
+..+|+++++..++++ ...+.|..+.+.|.++|+++.+....
T Consensus 107 v~~~P~~~lid~~G~i-~~~~~g~~~~~~l~~~l~~~~~~~~~ 148 (154)
T 3ia1_A 107 VLGQPWTFVVDREGKV-VALFAGRAGREALLDALLLAGADLEG 148 (154)
T ss_dssp BCSSCEEEEECTTSEE-EEEEESBCCHHHHHHHHHHTTCCC--
T ss_pred CCcccEEEEECCCCCE-EEEEcCCCCHHHHHHHHHhccCcccc
Confidence 9999999998544433 23788999999999999999876543
No 231
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.18 E-value=1.5e-10 Score=88.71 Aligned_cols=93 Identities=18% Similarity=0.302 Sum_probs=74.9
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCC-----------------------CC-CC-CCCCCc
Q 023747 165 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDAS-----------------------AN-EH-PKLQVE 219 (278)
Q Consensus 165 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~-----------------------~~-~~-~~~~i~ 219 (278)
.+++++|.||++||++|....+.+.+++..+... ++.+..|+.+ .+ .+ ..|++.
T Consensus 27 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~-~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~ 105 (153)
T 2l5o_A 27 QGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNK-NFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKAVGQAFGTQ 105 (153)
T ss_dssp TTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGT-TEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSSCHHHHHHTCC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccC-CeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCchHHHHHHcCCC
Confidence 4789999999999999999999999999999863 4778777643 22 23 366899
Q ss_pred CCCeEEEE-eCCCccCceEecCCCCHHHHHHHHHHHhcccCC
Q 023747 220 EYPTLLFY-PAGDKANPIKVSARSSSKNIAAFIKEQLKEKDQ 260 (278)
Q Consensus 220 ~~Ptl~~f-~~g~~~~~~~~~g~~~~~~l~~~i~~~~~~~~~ 260 (278)
.+|+++++ ++|+.. ..+.|..+.+.|.++|.+.+.....
T Consensus 106 ~~P~~~lid~~G~i~--~~~~g~~~~~~l~~~l~~ll~~~~~ 145 (153)
T 2l5o_A 106 VYPTSVLIGKKGEIL--KTYVGEPDFGKLYQEIDTAWRNSDA 145 (153)
T ss_dssp SSSEEEEECSSSCCC--EEEESSCCHHHHHHHHHHHHHCCSS
T ss_pred ccCeEEEECCCCcEE--EEEcCCCCHHHHHHHHHHHHHhhhh
Confidence 99999999 455543 3788999999999999998876554
No 232
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.17 E-value=1.8e-10 Score=88.80 Aligned_cols=92 Identities=16% Similarity=0.192 Sum_probs=74.2
Q ss_pred CCCcEEEEEECCCChhHHHH-HHHHHHHHHHhcCCCceEEEEEeCCC----------------------------CC---
Q 023747 165 SHKDVLLEVYTPWCVTCETT-SKQIEKLAKHFKGLDNLVIAKIDASA----------------------------NE--- 212 (278)
Q Consensus 165 ~~~~~~v~f~~~~c~~c~~~-~~~~~~~a~~~~~~~~~~~~~vd~~~----------------------------~~--- 212 (278)
.+++++|.||++||++|... .|.+.++++.+++. ++.+..|+++. ..
T Consensus 27 ~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~-~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 105 (158)
T 3eyt_A 27 RGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPED-KVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQPGDGA 105 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTT-TEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCSSS
T ss_pred CCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcC-CEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEEcCccchh
Confidence 37899999999999999995 99999999999854 68898888631 11
Q ss_pred ---C-CCCCCcCCCeEEEEeCCCccCceEecCCCCHHHHHHHHHHHhccc
Q 023747 213 ---H-PKLQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKEK 258 (278)
Q Consensus 213 ---~-~~~~i~~~Ptl~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~~~~ 258 (278)
+ ..|++..+|+++++..++.+ ..++.|..+.+.|.++|++.+...
T Consensus 106 ~~~~~~~~~v~~~P~~~lid~~G~i-~~~~~g~~~~~~l~~~i~~ll~~~ 154 (158)
T 3eyt_A 106 MPRTMAAYQMRGTPSLLLIDKAGDL-RAHHFGDVSELLLGAEIATLLGEA 154 (158)
T ss_dssp SCHHHHHTTCCSSSEEEEECTTSEE-EEEEESCCCHHHHHHHHHHHHTSC
T ss_pred hHHHHHHcCCCCCCEEEEECCCCCE-EEEEeCCCCHHHHHHHHHHHhccC
Confidence 2 36799999999999544444 337789999999999999988643
No 233
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.17 E-value=7e-11 Score=90.51 Aligned_cols=93 Identities=16% Similarity=0.385 Sum_probs=76.4
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCC------------------------C-CCCCCc
Q 023747 165 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASANE------------------------H-PKLQVE 219 (278)
Q Consensus 165 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~~------------------------~-~~~~i~ 219 (278)
.+++++|.||++||++|....+.+.++...+.+. ++.++.|+++... + ..|++.
T Consensus 29 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 107 (152)
T 2lja_A 29 KGKYIYIDVWATWCGPCRGELPALKELEEKYAGK-DIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYLIN 107 (152)
T ss_dssp TTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTS-SEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTTCC
T ss_pred CCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccC-CeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcCcC
Confidence 4689999999999999999999999999999753 5899999987652 2 357899
Q ss_pred CCCeEEEEe-CCCccCceEecCCCCHHHHHHHHHHHhcccCC
Q 023747 220 EYPTLLFYP-AGDKANPIKVSARSSSKNIAAFIKEQLKEKDQ 260 (278)
Q Consensus 220 ~~Ptl~~f~-~g~~~~~~~~~g~~~~~~l~~~i~~~~~~~~~ 260 (278)
.+|+++++. +|+... .+.|..+.+.|.++|++.++....
T Consensus 108 ~~P~~~lid~~G~i~~--~~~g~~~~~~l~~~l~~~~~~~~~ 147 (152)
T 2lja_A 108 GIPRFILLDRDGKIIS--ANMTRPSDPKTAEKFNELLGLEGH 147 (152)
T ss_dssp SSCCEEEECTTSCEEE--SSCCCTTCHHHHHHHHHHHTCCSS
T ss_pred CCCEEEEECCCCeEEE--ccCCCCCHHHHHHHHHHHhccccc
Confidence 999999997 554332 466888899999999999876553
No 234
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.16 E-value=7.7e-11 Score=87.44 Aligned_cols=84 Identities=11% Similarity=0.080 Sum_probs=69.4
Q ss_pred CCceEEEEEeC-------c-cchHHHHHHHHHHHHHhcCceEEEEEeC-------CCcccchhHHHHcCCCCCCceEEEE
Q 023747 37 DTLDMVYVFAK-------A-DDLKSLLEPLEDIARNFKGKIMFTAVDI-------ADEDLAKPFLTLFGLEESKNTVVTA 101 (278)
Q Consensus 37 ~~~~~v~F~~~-------~-~~c~~~~~~~~~la~~~~~~v~f~~vd~-------~~~~~~~~l~~~~~i~~~~Ptl~~~ 101 (278)
+++++|.||++ | ++|+.+.|.+.++++++.+.+.|+.||+ +.. +.++++|+|.++ ||+ .+
T Consensus 24 ~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~~~d~~---~~~~~~~~i~~~-Pt~-~~ 98 (123)
T 1wou_A 24 GKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEGCVFIYCQVGEKPYWKDPN---NDFRKNLKVTAV-PTL-LK 98 (123)
T ss_dssp TSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCTTEEEEEEECCCHHHHHCTT---CHHHHHHCCCSS-SEE-EE
T ss_pred CCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCCCcEEEEEECCCchhhhchh---HHHHHHCCCCee-CEE-EE
Confidence 78999999999 9 9999999999999999987899999999 566 789999999999 999 77
Q ss_pred ecCCcceeecCCCCCChHHHHHHHHH
Q 023747 102 FDNKAISKFLLESDLTPSNIEEFCSR 127 (278)
Q Consensus 102 ~~~~~~~~~~~~g~~~~~~i~~fi~~ 127 (278)
++++. ....+. ..+.+.|.+|+++
T Consensus 99 ~~~~~-~~~g~~-~~~~~~l~~~i~~ 122 (123)
T 1wou_A 99 YGTPQ-KLVESE-CLQANLVEMLFSE 122 (123)
T ss_dssp TTSSC-EEEGGG-GGCHHHHHHHHHC
T ss_pred EcCCc-eEeccc-cCCHHHHHHHHhc
Confidence 76532 222122 3567888888763
No 235
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=99.13 E-value=4.4e-11 Score=86.21 Aligned_cols=75 Identities=17% Similarity=0.168 Sum_probs=64.3
Q ss_pred cEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcCCCeEEEEeCCCccCceEecCCCCHH
Q 023747 168 DVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTLLFYPAGDKANPIKVSARSSSK 245 (278)
Q Consensus 168 ~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~~Ptl~~f~~g~~~~~~~~~g~~~~~ 245 (278)
..++.||++||++|+.+.+.+++++..+ .+.+..+|++.+ ++ .+|++. +|++++|.+|+.+ +.|..+.+
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~~e~----~i~~~~vDId~d~~l~~~ygv~-VP~l~~~~dG~~v----~~g~~~~~ 100 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQKKS----WFELEVINIDGNEHLTRLYNDR-VPVLFAVNEDKEL----CHYFLDSD 100 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHHS----CCCCEEEETTTCHHHHHHSTTS-CSEEEETTTTEEE----ECSSCCCH
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHhc----CCeEEEEECCCCHHHHHHhCCC-CceEEEEECCEEE----EecCCCHH
Confidence 5699999999999999999999999887 378899999987 55 589986 9999999887642 46788889
Q ss_pred HHHHHH
Q 023747 246 NIAAFI 251 (278)
Q Consensus 246 ~l~~~i 251 (278)
.|.+||
T Consensus 101 ~L~~~L 106 (107)
T 2fgx_A 101 VIGAYL 106 (107)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 999887
No 236
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.13 E-value=2.3e-10 Score=86.55 Aligned_cols=87 Identities=16% Similarity=0.305 Sum_probs=68.4
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHH---HHHHhcCCCceEEEEEeCCCC-C-------------------------CCC
Q 023747 165 SHKDVLLEVYTPWCVTCETTSKQIEK---LAKHFKGLDNLVIAKIDASAN-E-------------------------HPK 215 (278)
Q Consensus 165 ~~~~~~v~f~~~~c~~c~~~~~~~~~---~a~~~~~~~~~~~~~vd~~~~-~-------------------------~~~ 215 (278)
.+++++|.||++||++|....|.+.+ +...+++. ++.+..|+++.. + ...
T Consensus 26 ~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 104 (142)
T 3ewl_A 26 KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENG-TLRVLAIYPDENREEWATKAVYMPQGWIVGWNKAGDIRTRQL 104 (142)
T ss_dssp CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHT-SEEEEEEECSSCHHHHHHHHTTSCTTCEEEECTTCHHHHTTC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccC-CeEEEEEEecCCHHHHHHHHHHcCCCcceeeCCccchhhHHH
Confidence 47899999999999999999999988 88888653 599999988754 1 227
Q ss_pred CCCcCCCeEEEEeCCCccCceEecCCCCHHHHHHHHHHHhc
Q 023747 216 LQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLK 256 (278)
Q Consensus 216 ~~i~~~Ptl~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~~ 256 (278)
|++..+|+++++..++.+ .+ +..+.+.+.++|+++.+
T Consensus 105 ~~v~~~P~~~lid~~G~i---~~-~~~~~~~l~~~l~~~~~ 141 (142)
T 3ewl_A 105 YDIRATPTIYLLDGRKRV---IL-KDTSMEQLIDYLATQAG 141 (142)
T ss_dssp SCCCSSSEEEEECTTCBE---EE-CSCCHHHHHHHHHC---
T ss_pred cCCCCCCeEEEECCCCCE---Ee-cCCCHHHHHHHHHHHcc
Confidence 899999999999544433 34 56889999999987654
No 237
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.13 E-value=2.8e-10 Score=87.90 Aligned_cols=92 Identities=4% Similarity=-0.053 Sum_probs=75.8
Q ss_pred cCCceEEEEE-eCc-cchHHHHHHH---HHHHHHhcCceEEEEEeCCCcc--------cchhHHHHcCCCCCCceEEEEe
Q 023747 36 IDTLDMVYVF-AKA-DDLKSLLEPL---EDIARNFKGKIMFTAVDIADED--------LAKPFLTLFGLEESKNTVVTAF 102 (278)
Q Consensus 36 ~~~~~~v~F~-~~~-~~c~~~~~~~---~~la~~~~~~v~f~~vd~~~~~--------~~~~l~~~~~i~~~~Ptl~~~~ 102 (278)
.+++++|.|| ++| ++|+.+.|.+ .++++.+...+.++.+|++... ....++++|+|.++ ||+ .++
T Consensus 46 ~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~v~~~-Pt~-~~~ 123 (154)
T 2ju5_A 46 DHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGVHLHMVEVDFPQKNHQPEEQRQKNQELKAQYKVTGF-PEL-VFI 123 (154)
T ss_dssp HCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEECCSSCCCCHHHHHHHHHHHHHTTCCSS-SEE-EEE
T ss_pred CCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcCcEEEEEecCccccCCChhhHhhHHHHHHHcCCCCC-CEE-EEE
Confidence 4678999999 999 9999999999 8887777667999999998751 11489999999999 999 777
Q ss_pred cCCcceeecCCCCC--ChHHHHHHHHHHhc
Q 023747 103 DNKAISKFLLESDL--TPSNIEEFCSRLLH 130 (278)
Q Consensus 103 ~~~~~~~~~~~g~~--~~~~i~~fi~~~~~ 130 (278)
+.++...+.+ |.. +.+.+.+++++.+.
T Consensus 124 d~~G~~~~~~-G~~~~~~~~l~~~l~~~l~ 152 (154)
T 2ju5_A 124 DAEGKQLARM-GFEPGGGAAYVSKVKSALK 152 (154)
T ss_dssp CTTCCEEEEE-CCCTTCHHHHHHHHHHHHT
T ss_pred cCCCCEEEEe-cCCCCCHHHHHHHHHHHHh
Confidence 5444456666 877 89999999998764
No 238
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.13 E-value=1.1e-11 Score=101.30 Aligned_cols=103 Identities=15% Similarity=0.143 Sum_probs=78.3
Q ss_pred ccccc-CCCCceeeeeeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCC
Q 023747 18 TLISN-LPTTSLELLKVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESK 95 (278)
Q Consensus 18 ~~v~~-~~~~~~~~~~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~ 95 (278)
.++.+ +..++...+.....+.+++|.||++| ++|+.+.|.|.++|.+|. .+.|+.||++ + +.++++|+|.++
T Consensus 100 ~v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~-~v~f~~vd~~-~---~~l~~~~~i~~~- 173 (217)
T 2trc_P 100 FVYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYP-MVKFCKIRAS-N---TGAGDRFSSDVL- 173 (217)
T ss_dssp SEEECCSHHHHHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT-TSEEEEEEHH-H---HTCSTTSCGGGC-
T ss_pred eEEEcCCHHHHHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCC-CeEEEEEECC-c---HHHHHHCCCCCC-
Confidence 34555 45556555544344578999999999 999999999999999996 5999999998 5 789999999999
Q ss_pred ceEEEEecCCcceeecCCCCCC-------hHHHHHHHHHH
Q 023747 96 NTVVTAFDNKAISKFLLESDLT-------PSNIEEFCSRL 128 (278)
Q Consensus 96 Ptl~~~~~~~~~~~~~~~g~~~-------~~~i~~fi~~~ 128 (278)
||+ .+|.+|.. ...+.|..+ .+.|..|+.+.
T Consensus 174 PTl-~~~~~G~~-v~~~~G~~~~~g~~~~~~~Le~~L~~~ 211 (217)
T 2trc_P 174 PTL-LVYKGGEL-ISNFISVAEQFAEDFFAADVESFLNEY 211 (217)
T ss_dssp SEE-EEEETTEE-EEEETTGGGGSCSSCCHHHHHHHHHTT
T ss_pred CEE-EEEECCEE-EEEEeCCcccCcccCCHHHHHHHHHHc
Confidence 999 55554432 223355444 48899998863
No 239
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=99.12 E-value=3.8e-10 Score=92.83 Aligned_cols=120 Identities=17% Similarity=0.284 Sum_probs=87.7
Q ss_pred HHHHHHhccCCcccccccCCCCceeeeeeeecCCceE-EEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccc
Q 023747 5 LLKQATLRLPKSCTLISNLPTTSLELLKVSQIDTLDM-VYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLA 82 (278)
Q Consensus 5 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~ 82 (278)
|..++.....-. +..+++.|.. ..+..+.+.+ ++|+.+| .+|+.+.+.|+++|+++++++.|+.+|++...+
T Consensus 103 l~~fi~~~~~pl--v~e~t~~n~~---~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~~k~~i~F~~vd~~~~~~- 176 (227)
T 4f9z_D 103 LSRFIEINSLHM--VTEYNPVTVI---GLFNSVIQIHLLLIMNKASPEYEENMHRYQKAAKLFQGKILFILVDSGMKEN- 176 (227)
T ss_dssp HHHHHHHHCCCS--EEECCHHHHH---HHHHSSCCEEEEEEECTTSTTHHHHHHHHHHHHHHTTTTCEEEEEETTSGGG-
T ss_pred HHHHHHHhCCCc--eeecCcccHH---HHhccCCceEEEEEEcCCcchHHHHHHHHHHHHHHhhCCEEEEEeCCccHhH-
Confidence 445555443222 2334444433 3344554555 4566778 899999999999999999999999999985333
Q ss_pred hhHHHHcCCC--CCCceEEEEecCCcceeecCC-CCCChHHHHHHHHHHhcCc
Q 023747 83 KPFLTLFGLE--ESKNTVVTAFDNKAISKFLLE-SDLTPSNIEEFCSRLLHGT 132 (278)
Q Consensus 83 ~~l~~~~~i~--~~~Ptl~~~~~~~~~~~~~~~-g~~~~~~i~~fi~~~~~~~ 132 (278)
+.+++.||+. ++ |++ .+++.....+|.+. +..+.++|.+|++++++|+
T Consensus 177 ~~~l~~fgl~~~~~-P~~-~i~~~~~~~ky~~~~~~~t~~~i~~Fv~~~~~Gk 227 (227)
T 4f9z_D 177 GKVISFFKLKESQL-PAL-AIYQTLDDEWDTLPTAEVSVEHVQNFCDGFLSGK 227 (227)
T ss_dssp HHHHHHTTCCGGGC-SEE-EEEESSSCCEEEETTCCCCHHHHHHHHHHHHTTC
T ss_pred HHHHHHcCCCcccC-CEE-EEEECCCCccccCCcCCCCHHHHHHHHHHHhCCC
Confidence 6788999998 77 999 88886655567664 6799999999999999874
No 240
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.12 E-value=3.1e-10 Score=84.77 Aligned_cols=86 Identities=21% Similarity=0.380 Sum_probs=69.4
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCC----------------------------C-CC-C
Q 023747 165 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA----------------------------N-EH-P 214 (278)
Q Consensus 165 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~----------------------------~-~~-~ 214 (278)
.+++++|.||++||++|....+.+.+++..+.. ++.+..+++.. + .+ .
T Consensus 21 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 98 (138)
T 4evm_A 21 KGKKVYLKFWASWCSICLASLPDTDEIAKEAGD--DYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKLLE 98 (138)
T ss_dssp TTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTT--TEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTTCHHHH
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCC--CcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcchHHHH
Confidence 478999999999999999999999999999655 68888885422 1 22 3
Q ss_pred CCCCcCCCeEEEE-eCCCccCceEecCCCCHHHHHHHHHHH
Q 023747 215 KLQVEEYPTLLFY-PAGDKANPIKVSARSSSKNIAAFIKEQ 254 (278)
Q Consensus 215 ~~~i~~~Ptl~~f-~~g~~~~~~~~~g~~~~~~l~~~i~~~ 254 (278)
.|++.++|+++++ ++|+.. ..+.|..+.+.+.++|++.
T Consensus 99 ~~~v~~~P~~~lid~~G~i~--~~~~g~~~~~~l~~~l~~l 137 (138)
T 4evm_A 99 TYGVRSYPTQAFIDKEGKLV--KTHPGFMEKDAILQTLKEL 137 (138)
T ss_dssp HTTCCSSSEEEEECTTCCEE--EEEESCCCHHHHHHHHHHC
T ss_pred HcCcccCCeEEEECCCCcEE--EeecCCCcHHHHHHHHHhh
Confidence 6789999999999 555543 3788999999999999763
No 241
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.11 E-value=8.1e-11 Score=89.51 Aligned_cols=90 Identities=11% Similarity=0.136 Sum_probs=71.8
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-C-------------------------C-CCCC
Q 023747 165 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-E-------------------------H-PKLQ 217 (278)
Q Consensus 165 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~-------------------------~-~~~~ 217 (278)
.+++++|.||++||++|..+.+.+.++...+... ++.++.|+++.. + + ..|+
T Consensus 30 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 108 (148)
T 3hcz_A 30 QAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAK-GIQVYAANIERKDEEWLKFIRSKKIGGWLNVRDSKNHTDFKITYD 108 (148)
T ss_dssp CCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGG-TEEEEEEECCSSSHHHHHHHHHHTCTTSEEEECTTCCCCHHHHHC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccC-CEEEEEEEecCCHHHHHHHHHHcCCCCceEEeccccchhHHHhcC
Confidence 4789999999999999999999999999999863 499999998865 3 4 3568
Q ss_pred CcCCCeEEEEeCCCccCceEecCCCCHHHHHHHHHHHhc
Q 023747 218 VEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLK 256 (278)
Q Consensus 218 i~~~Ptl~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~~ 256 (278)
+..+|+++++..++.+ ..++.|..+.+.+++.+.+.+.
T Consensus 109 i~~~P~~~lid~~G~i-~~~~~g~~~~~~~l~~l~~~l~ 146 (148)
T 3hcz_A 109 IYATPVLYVLDKNKVI-IAKRIGYENLDDFLVQYEKSLK 146 (148)
T ss_dssp CCSSCEEEEECTTCBE-EEESCCGGGHHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCCcE-EEecCCHHHHHHHHHHHHHHhc
Confidence 9999999999444433 2366777777888877776553
No 242
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.11 E-value=3.9e-10 Score=85.49 Aligned_cols=82 Identities=12% Similarity=0.274 Sum_probs=66.1
Q ss_pred CCcEEEEEECCCChhHHHHHHHHHH---HHHHhcCCCceEEEEEeCCCC-C-------------------------CCCC
Q 023747 166 HKDVLLEVYTPWCVTCETTSKQIEK---LAKHFKGLDNLVIAKIDASAN-E-------------------------HPKL 216 (278)
Q Consensus 166 ~~~~~v~f~~~~c~~c~~~~~~~~~---~a~~~~~~~~~~~~~vd~~~~-~-------------------------~~~~ 216 (278)
+++++|.||++||++|+...|.+.+ +...++.. ++.+..|+.+.. + ...|
T Consensus 31 gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~-~~~vi~i~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 109 (142)
T 3eur_A 31 AEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAK-KLKVLSIYPDEELDEWKKHRNDFAKEWTNGYDKELVIKNKNLY 109 (142)
T ss_dssp CSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTT-SEEEEEEECSSCHHHHHHHGGGSCTTSEEEECTTCHHHHTTCS
T ss_pred CCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccC-CeEEEEEEcCCCHHHHHHHHHhcccccccccCccchhhhhhhc
Confidence 6899999999999999999999999 99999763 689999998765 1 2467
Q ss_pred CCcCCCeEEEEeCCCccCceEecCCCCHHHHHHHHH
Q 023747 217 QVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIK 252 (278)
Q Consensus 217 ~i~~~Ptl~~f~~g~~~~~~~~~g~~~~~~l~~~i~ 252 (278)
++..+|+++++..++.+ .+.+ .+.+.+.+||+
T Consensus 110 ~v~~~P~~~lid~~G~i---~~~~-~~~~~l~~~l~ 141 (142)
T 3eur_A 110 DLRAIPTLYLLDKNKTV---LLKD-ATLQKVEQYLA 141 (142)
T ss_dssp CCTTCSEEEEECTTCBE---EEEE-ECHHHHHHHHH
T ss_pred CCCcCCeEEEECCCCcE---EecC-CCHHHHHHHHh
Confidence 89999999999655543 3332 35788888885
No 243
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.11 E-value=6.6e-10 Score=83.12 Aligned_cols=90 Identities=7% Similarity=0.127 Sum_probs=74.2
Q ss_pred cCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCc-------------------ccchhHHHHcCCCCCC
Q 023747 36 IDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADE-------------------DLAKPFLTLFGLEESK 95 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~-------------------~~~~~l~~~~~i~~~~ 95 (278)
.+++++|.||++| ++|+...|.+.++++++. .+.|+.|+++.. +....+++.|++.++
T Consensus 23 ~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~- 100 (136)
T 1lu4_A 23 QGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP-AVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARYNVPWQ- 100 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHHTTCCSS-
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHCC-CcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHhcCCCCC-
Confidence 4678999999999 999999999999999998 699999999871 001689999999999
Q ss_pred ceEEEEecCCcceeecCC---CCCChHHHHHHHHHHh
Q 023747 96 NTVVTAFDNKAISKFLLE---SDLTPSNIEEFCSRLL 129 (278)
Q Consensus 96 Ptl~~~~~~~~~~~~~~~---g~~~~~~i~~fi~~~~ 129 (278)
|++ .+++.++... .+. |..+.+++.+++++.+
T Consensus 101 P~~-~lid~~G~i~-~~~~~~g~~~~~~l~~~l~~ll 135 (136)
T 1lu4_A 101 PAF-VFYRADGTST-FVNNPTAAMSQDELSGRVAALT 135 (136)
T ss_dssp SEE-EEECTTSCEE-EECCSSSCCCHHHHHHHHHHC-
T ss_pred CEE-EEECCCCcEE-EEEcCCCccCHHHHHHHHHHHh
Confidence 999 7775444444 557 8899999999998764
No 244
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.11 E-value=6.4e-10 Score=84.39 Aligned_cols=94 Identities=12% Similarity=0.166 Sum_probs=78.2
Q ss_pred cCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCC------------------------cccchhHHHHcC
Q 023747 36 IDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIAD------------------------EDLAKPFLTLFG 90 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~------------------------~~~~~~l~~~~~ 90 (278)
.+++++|.||++| ++|+...|.+.++++++.+.+.|+.|+++. .+....+++.||
T Consensus 28 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 107 (148)
T 2b5x_A 28 GEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQLNVVAVHMPRSEDDLDPGKIKETAAEHDITQPIFVDSDHALTDAFE 107 (148)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEECCCSTTTSSHHHHHHHHHHTTCCSCEEECSSCHHHHHTC
T ss_pred CCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCCcEEEEEEcCCCccccCHHHHHHHHHHcCCCcceEECCchhHHHHhC
Confidence 4578999999999 999999999999999999889999999653 111268999999
Q ss_pred CCCCCceEEEEecCCcceeecCCCCCChHHHHHHHHHHhcC
Q 023747 91 LEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHG 131 (278)
Q Consensus 91 i~~~~Ptl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~ 131 (278)
|.++ |++ .+++.++...+.+.|..+.+++.+++++.++.
T Consensus 108 v~~~-P~~-~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~~ 146 (148)
T 2b5x_A 108 NEYV-PAY-YVFDKTGQLRHFQAGGSGMKMLEKRVNRVLAE 146 (148)
T ss_dssp CCCS-SEE-EEECTTCBEEEEEESCSTTHHHHHHHHHHHTT
T ss_pred CCCC-CEE-EEECCCCcEEEEecCCCCHHHHHHHHHHHHhc
Confidence 9999 999 77765555566667888999999999998753
No 245
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=98.70 E-value=7.5e-12 Score=93.64 Aligned_cols=100 Identities=9% Similarity=0.054 Sum_probs=79.9
Q ss_pred eeeeeecCCceEEEEEeCc-cchHHHHHHH---HHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCceEEEEecCC
Q 023747 30 LLKVSQIDTLDMVYVFAKA-DDLKSLLEPL---EDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFDNK 105 (278)
Q Consensus 30 ~~~~~~~~~~~~v~F~~~~-~~c~~~~~~~---~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Ptl~~~~~~~ 105 (278)
+......+++++|.||++| ++|+.+.|.+ .++++.+++.+.|+.||++...+ ..++++|+|.++ ||+ .+++..
T Consensus 12 ~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~-~~~~~~~~v~~~-Pt~-~~~d~~ 88 (130)
T 2lst_A 12 LALAQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEARFVVASVSVDTPEG-QELARRYRVPGT-PTF-VFLVPK 88 (130)
Confidence 3444456788999999999 9999999999 99999998889999999953322 789999999999 999 777422
Q ss_pred -cce--eecCCCCCChHHHHHHHHHHhcCc
Q 023747 106 -AIS--KFLLESDLTPSNIEEFCSRLLHGT 132 (278)
Q Consensus 106 -~~~--~~~~~g~~~~~~i~~fi~~~~~~~ 132 (278)
+.. ...+.|..+.+.+.+++++.+++.
T Consensus 89 ~G~~~~~~~~~G~~~~~~l~~~l~~~~~~~ 118 (130)
T 2lst_A 89 AGAWEEVGRLFGSRPRAEFLKELRQVCVKG 118 (130)
Confidence 222 345678889999999999887543
No 246
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.10 E-value=7.2e-10 Score=92.16 Aligned_cols=85 Identities=7% Similarity=0.034 Sum_probs=73.2
Q ss_pred CCceEEEEEeCc-cchHHHHHHHHHHHHHhc----CceEEEEEeCCCcccchhHHHHcCCCCCCceEEEEecCCcceeec
Q 023747 37 DTLDMVYVFAKA-DDLKSLLEPLEDIARNFK----GKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFDNKAISKFL 111 (278)
Q Consensus 37 ~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~----~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Ptl~~~~~~~~~~~~~ 111 (278)
+.++++.||++| ++|+.+.|.|++++..+. +.+.++.||++.+ +.++++|+|.++ ||+ .+ + |. ..
T Consensus 138 ~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~~---~~~~~~~~V~~v-Pt~-~i-~-G~-~~-- 207 (243)
T 2hls_A 138 GRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYEN---PDIADKYGVMSV-PSI-AI-N-GY-LV-- 207 (243)
T ss_dssp SCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTTC---HHHHHHTTCCSS-SEE-EE-T-TE-EE--
T ss_pred CCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECccC---HHHHHHcCCeee-CeE-EE-C-CE-EE--
Confidence 446788999999 999999999999999993 4699999999999 899999999999 999 54 4 32 23
Q ss_pred CCCCCChHHHHHHHHHHhcC
Q 023747 112 LESDLTPSNIEEFCSRLLHG 131 (278)
Q Consensus 112 ~~g~~~~~~i~~fi~~~~~~ 131 (278)
+.|.++.++|.+|+.+.+..
T Consensus 208 ~~G~~~~~~l~~~l~~~~~~ 227 (243)
T 2hls_A 208 FVGVPYEEDFLDYVKSAAEG 227 (243)
T ss_dssp EESCCCHHHHHHHHHHHHTT
T ss_pred EeCCCCHHHHHHHHHHHhhc
Confidence 58999999999999998753
No 247
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.10 E-value=1.6e-10 Score=90.19 Aligned_cols=101 Identities=19% Similarity=0.335 Sum_probs=72.2
Q ss_pred CeEEE--cccchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCC----------------
Q 023747 149 NVQIV--VGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA---------------- 210 (278)
Q Consensus 149 ~v~~l--~~~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~---------------- 210 (278)
.+..+ ++..+..-....+++++|.||++||++|+.+.|.+.++++. ++.++.|+++.
T Consensus 32 ~l~~~~~~g~~~~~~~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~-----~v~vv~v~~~~~~~~~~~~~~~~~~~~ 106 (168)
T 2b1k_A 32 RLESLDNPGQFYQADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ-----GIRVVGMNYKDDRQKAISWLKELGNPY 106 (168)
T ss_dssp EEEESSSTTCEEEGGGGCCSSCEEEEEECTTCHHHHHHHHHHHHHHHT-----TCCEEEEEESCCHHHHHHHHHHHCCCC
T ss_pred EeecccCCCcEeehhHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHC-----CCEEEEEECCCChHHHHHHHHHcCCCC
Confidence 34455 44444332224678999999999999999999999999876 36666666432
Q ss_pred -------C-CC-CCCCCcCCCeEEEEe-CCCccCceEecCCCCHHHHHHHHHHHhc
Q 023747 211 -------N-EH-PKLQVEEYPTLLFYP-AGDKANPIKVSARSSSKNIAAFIKEQLK 256 (278)
Q Consensus 211 -------~-~~-~~~~i~~~Ptl~~f~-~g~~~~~~~~~g~~~~~~l~~~i~~~~~ 256 (278)
+ .+ ..|++..+|+.+++. +|+.. ..+.|..+.+.+.++|++.+.
T Consensus 107 ~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~--~~~~g~~~~~~l~~~l~~~l~ 160 (168)
T 2b1k_A 107 ALSLFDGDGMLGLDLGVYGAPETFLIDGNGIIR--YRHAGDLNPRVWEEEIKPLWE 160 (168)
T ss_dssp SEEEEETTCHHHHHHTCCSSSEEEEECTTSBEE--EEEESCCCHHHHHHTTHHHHH
T ss_pred ceeeECcchHHHHHcCccccCEEEEECCCCeEE--EEEeCCCCHHHHHHHHHHHHH
Confidence 2 22 357899999766664 55433 367899999999999988765
No 248
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.10 E-value=3.3e-10 Score=89.73 Aligned_cols=89 Identities=13% Similarity=0.322 Sum_probs=70.8
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCce------EEEEEeCCC-C-C-CCCC-------------------
Q 023747 165 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNL------VIAKIDASA-N-E-HPKL------------------- 216 (278)
Q Consensus 165 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~------~~~~vd~~~-~-~-~~~~------------------- 216 (278)
.+++++|.||++||++|....+.+.+++..++.. .+ .|+.|+++. . + +.++
T Consensus 58 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~-~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 136 (183)
T 3lwa_A 58 ENQVVILNAWGQWCAPCRSESDDLQIIHEELQAA-GNGDTPGGTVLGINVRDYSRDIAQDFVTDNGLDYPSIYDPPFMTA 136 (183)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHC-C---CCSEEEEEEECSCCCHHHHHHHHHHTTCCSCEEECTTCGGG
T ss_pred CCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhc-CCCccCCcEEEEEECCCCCHHHHHHHHHHcCCCccEEECCcchHH
Confidence 4689999999999999999999999999999763 36 999999987 3 2 2232
Q ss_pred ------CCcCCCeEEEEe-CCCccCceEecCCCCHHHHHHHHHHHhc
Q 023747 217 ------QVEEYPTLLFYP-AGDKANPIKVSARSSSKNIAAFIKEQLK 256 (278)
Q Consensus 217 ------~i~~~Ptl~~f~-~g~~~~~~~~~g~~~~~~l~~~i~~~~~ 256 (278)
++..+|+.+++. +|+.. ..+.|..+.+.|.++|.+.+.
T Consensus 137 ~~~~~~~v~~~P~~~lid~~G~i~--~~~~g~~~~~~l~~~l~~ll~ 181 (183)
T 3lwa_A 137 ASLGGVPASVIPTTIVLDKQHRPA--AVFLREVTSKDVLDVALPLVD 181 (183)
T ss_dssp GGTTTCCTTCCSEEEEECTTSCEE--EEECSCCCHHHHHHHHHHHHH
T ss_pred HHhccCCCCCCCeEEEECCCCcEE--EEEcCCCCHHHHHHHHHHHHh
Confidence 578899877774 55433 368899999999999998764
No 249
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.09 E-value=5e-10 Score=85.67 Aligned_cols=93 Identities=14% Similarity=0.315 Sum_probs=72.3
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCC-----------------------C-CCCCCcC
Q 023747 165 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASANE-----------------------H-PKLQVEE 220 (278)
Q Consensus 165 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~~-----------------------~-~~~~i~~ 220 (278)
.+++++|.||++||++|..+.+.+.+++..+... .+.++.|+++... + ..|++..
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 105 (152)
T 3gl3_A 27 TGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAK-GFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRLYGVKG 105 (152)
T ss_dssp TTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGG-TEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHHTTCCS
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcC-CeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHHHcCCCC
Confidence 4789999999999999999999999999999863 4889999887541 2 2478999
Q ss_pred CCeEEEEeCCCccCceEecCC--CCHHHHHHHHHHHhcccC
Q 023747 221 YPTLLFYPAGDKANPIKVSAR--SSSKNIAAFIKEQLKEKD 259 (278)
Q Consensus 221 ~Ptl~~f~~g~~~~~~~~~g~--~~~~~l~~~i~~~~~~~~ 259 (278)
+|+++++..++++ ...+.|. .+.+.|.++|.++++...
T Consensus 106 ~P~~~lid~~G~i-~~~~~g~~~~~~~~l~~~i~~~~~~~~ 145 (152)
T 3gl3_A 106 MPTSFLIDRNGKV-LLQHVGFRPADKEALEQQILAALGGNE 145 (152)
T ss_dssp SSEEEEECTTSBE-EEEEESCCTTTHHHHHHHHHHHTC---
T ss_pred CCeEEEECCCCCE-EEEEccCCCcCHHHHHHHHHHHHcccc
Confidence 9999999444433 2356674 466899999999987654
No 250
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=99.09 E-value=1e-09 Score=91.59 Aligned_cols=121 Identities=20% Similarity=0.316 Sum_probs=82.5
Q ss_pred cccCCCCceeeeeeeecCCceEEEEEeCc------cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCC
Q 023747 20 ISNLPTTSLELLKVSQIDTLDMVYVFAKA------DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEE 93 (278)
Q Consensus 20 v~~~~~~~~~~~~~~~~~~~~~v~F~~~~------~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~ 93 (278)
..+++.|...+ + .+.++++.|+... ...+.+...+.++|++|+ ++.|+.+|+.+. ...++.||+..
T Consensus 119 ~e~t~~n~~~~---~-~~~~l~~~~~~~d~~~~~~~~~~~~~~~~~~vAk~~k-ki~F~~~d~~~~---~~~l~~fgl~~ 190 (250)
T 3ec3_A 119 GHRKTSNDAKR---Y-SKRPLVVVYYSVDFSFDYRTATQFWRNKVLEVAKDFP-EYTFAIADEEDY---ATEVKDLGLSE 190 (250)
T ss_dssp EEECTTTHHHH---S-CSSSEEEEEECCCCSTTTHHHHHHHHHHHHHHHTTCT-TSEEEEEETTTT---HHHHHHTTCSS
T ss_pred eecCccchhhh---h-ccCccEEEEEecccccccchhHHHHHHHHHHHHHhhc-ceeEEEEcHHHH---HHHHHHcCCCc
Confidence 34555554332 2 2466777777532 234568999999999999 899999999988 78889999984
Q ss_pred --CCceEEEEecCCcceeecCC-CCCChHHHHHHHHHHhcCcccccccCCCCCCCCCCCe
Q 023747 94 --SKNTVVTAFDNKAISKFLLE-SDLTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANV 150 (278)
Q Consensus 94 --~~Ptl~~~~~~~~~~~~~~~-g~~~~~~i~~fi~~~~~~~~~~~~~s~~~p~~~~~~v 150 (278)
..|.+ .+++. .+.+|.+. +..+.++|.+|++++++|+++|+++|+++|+.+.++|
T Consensus 191 ~~~~p~~-~~~~~-~~~ky~~~~~~~t~~~i~~Fv~~~~~Gkl~p~~kSepiPe~~~~pV 248 (250)
T 3ec3_A 191 SGGDVNA-AILDE-SGKKFAMEPEEFDSDALREFVMAFKKGKLKPVIKSQPVPKNNKGAA 248 (250)
T ss_dssp CSCSCEE-EEECT-TSCEEECCCCSCCHHHHHHHHHHHHTTCCCCCC-------------
T ss_pred cCCCcEE-EEEcC-CCceecCCcccCCHHHHHHHHHHHHCCCccceeecCCCCCCCCCCC
Confidence 42466 66664 35688887 6799999999999999999999999999998755555
No 251
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.09 E-value=2.9e-10 Score=86.41 Aligned_cols=87 Identities=20% Similarity=0.392 Sum_probs=69.0
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHh-cCCCceEEEEEeCCCC--------------------------CC-CCC
Q 023747 165 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHF-KGLDNLVIAKIDASAN--------------------------EH-PKL 216 (278)
Q Consensus 165 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~-~~~~~~~~~~vd~~~~--------------------------~~-~~~ 216 (278)
.+++++|.||++||++|..+.|.+.+++..+ .+. ++.++.|+++.. .+ ..|
T Consensus 32 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 110 (148)
T 3fkf_A 32 RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNK-NFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQY 110 (148)
T ss_dssp TTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCT-TEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHT
T ss_pred CCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCC-CeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHHhc
Confidence 4789999999999999999999999999999 542 599999988763 22 478
Q ss_pred CCcCCCeEEEEeCCCccCceEecCCCCHHHHHHHHHHHhc
Q 023747 217 QVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLK 256 (278)
Q Consensus 217 ~i~~~Ptl~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~~ 256 (278)
++..+|+++++..++.+ .+... +.+.+.++|.+.+.
T Consensus 111 ~v~~~P~~~lid~~G~i---~~~~~-~~~~l~~~l~~ll~ 146 (148)
T 3fkf_A 111 AILTLPTNILLSPTGKI---LARDI-QGEALTGKLKELLK 146 (148)
T ss_dssp TCCSSSEEEEECTTSBE---EEESC-CHHHHHHHHHHHC-
T ss_pred CCCCcCEEEEECCCCeE---EEecC-CHHHHHHHHHHHHc
Confidence 99999999999444333 23323 88999999988764
No 252
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=99.09 E-value=4.6e-11 Score=83.06 Aligned_cols=74 Identities=11% Similarity=0.130 Sum_probs=59.2
Q ss_pred EEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCCCcCCCeEEEEeCCCccCceEecCCCCHHHH
Q 023747 170 LLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTLLFYPAGDKANPIKVSARSSSKNI 247 (278)
Q Consensus 170 ~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~~i~~~Ptl~~f~~g~~~~~~~~~g~~~~~~l 247 (278)
++.||++||++|+.+.+.+++++..+ +..+|++++ ++ .+|++. +|++++ .+|+.+ . |..+.+.|
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~-------~~~vdid~~~~l~~~~g~~-vPtl~~-~~G~~v----~-g~~~~~~L 68 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA-------FFSVFIDDDAALESAYGLR-VPVLRD-PMGREL----D-WPFDAPRL 68 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC-------EEEEECTTCHHHHHHHTTT-CSEEEC-TTCCEE----E-SCCCHHHH
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh-------eEEEECCCCHHHHHHhCCC-cCeEEE-ECCEEE----e-CCCCHHHH
Confidence 78999999999999999998775432 678999988 56 588998 999998 777643 2 88899999
Q ss_pred HHHHHHHhcc
Q 023747 248 AAFIKEQLKE 257 (278)
Q Consensus 248 ~~~i~~~~~~ 257 (278)
.+||.+.+..
T Consensus 69 ~~~l~~~~~~ 78 (87)
T 1ttz_A 69 RAWLDAAPHA 78 (87)
T ss_dssp HHHHHTCC--
T ss_pred HHHHHHHHHH
Confidence 9999876553
No 253
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.09 E-value=4.3e-11 Score=89.28 Aligned_cols=106 Identities=11% Similarity=0.134 Sum_probs=81.9
Q ss_pred cccccC-CCCceeeeeee-ecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCC
Q 023747 18 TLISNL-PTTSLELLKVS-QIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEES 94 (278)
Q Consensus 18 ~~v~~~-~~~~~~~~~~~-~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~ 94 (278)
+++.+. ..++...+... ..+++++|+||++| ++|+.+.|.|.+++..+++ +.|+.||++.. +.++++|+|.++
T Consensus 15 ~~~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-v~~~~v~~~~~---~~~~~~~~v~~~ 90 (130)
T 1wmj_A 15 VVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPG-AVFLKVDVDEL---KEVAEKYNVEAM 90 (130)
T ss_dssp SSBCCSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCTT-BCCEECCTTTS---GGGHHHHTCCSS
T ss_pred ceEEcCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCCC-CEEEEEeccch---HHHHHHcCCCcc
Confidence 445552 34444333322 24778999999999 9999999999999999984 99999999988 899999999999
Q ss_pred CceEEEEecCCcceeecCCCCCChHHHHHHHHHHhcC
Q 023747 95 KNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHG 131 (278)
Q Consensus 95 ~Ptl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~ 131 (278)
||+ .++.+|. ....+.| .+.+++.+++++.+..
T Consensus 91 -Pt~-~~~~~g~-~~~~~~g-~~~~~l~~~l~~~~~~ 123 (130)
T 1wmj_A 91 -PTF-LFIKDGA-EADKVVG-ARKDDLQNTIVKHVGA 123 (130)
T ss_dssp -CCC-CBCTTTT-CCBCCCT-TCTTTHHHHHHHHTSS
T ss_pred -ceE-EEEeCCe-EEEEEeC-CCHHHHHHHHHHHHhc
Confidence 999 5665443 2334466 5888999999998754
No 254
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.09 E-value=8.6e-10 Score=87.51 Aligned_cols=137 Identities=15% Similarity=0.252 Sum_probs=88.8
Q ss_pred hHHHHHHHHHHhcCcccccccCCCCCCCCCCCeEEEcccchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcC
Q 023747 118 PSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKG 197 (278)
Q Consensus 118 ~~~i~~fi~~~~~~~~~~~~~s~~~p~~~~~~v~~l~~~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~ 197 (278)
..++.+|+..+..|.+........-...+...+...+++.+.-- .-.+++++|.||++||++|....+.+.++...+..
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~p~f~l~~~~G~~~~l~-~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~ 91 (186)
T 1jfu_A 13 AVATAQKIAPLAHGEVAALTMASAPLKLPDLAFEDADGKPKKLS-DFRGKTLLVNLWATWCVPCRKEMPALDELQGKLSG 91 (186)
T ss_dssp HHHHHHHHGGGCCGGGTTCEECCSCCBCCCCEEECTTSCEEEGG-GGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCB
T ss_pred HHHHhhhcchhhcchhhhhccccCCCcCCCcEeEcCCCCEeeHH-HcCCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhcc
Confidence 45677788777776665443321111111222333333333211 11478999999999999999999999999999974
Q ss_pred CCceEEEEEeCCCC--C-C----CCCCCc-----------------------CCCeEEEEeCCCccCceEecCCCC--HH
Q 023747 198 LDNLVIAKIDASAN--E-H----PKLQVE-----------------------EYPTLLFYPAGDKANPIKVSARSS--SK 245 (278)
Q Consensus 198 ~~~~~~~~vd~~~~--~-~----~~~~i~-----------------------~~Ptl~~f~~g~~~~~~~~~g~~~--~~ 245 (278)
. ++.++.|+++.. + . .++++. .+|+++++..++++ ...+.|..+ .+
T Consensus 92 ~-~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~P~~~lid~~G~i-~~~~~g~~~~~~~ 169 (186)
T 1jfu_A 92 P-NFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQDLKAIGRALGMPTSVLVDPQGCE-IATIAGPAEWASE 169 (186)
T ss_dssp T-TEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHHHHHHTTTCCSSSSEEEEECTTSBE-EEEEESCCCTTSH
T ss_pred C-CcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcchHHHHhccccccCCCCEEEEECCCCCE-EEEEecCCccCHH
Confidence 3 688888888754 1 1 233442 89999999544444 236777654 78
Q ss_pred HHHHHHHHHhcc
Q 023747 246 NIAAFIKEQLKE 257 (278)
Q Consensus 246 ~l~~~i~~~~~~ 257 (278)
.+.++|.+.+..
T Consensus 170 ~l~~~l~~ll~~ 181 (186)
T 1jfu_A 170 DALKLIRAATGK 181 (186)
T ss_dssp HHHHHHHHHHC-
T ss_pred HHHHHHHHHhcc
Confidence 999999988764
No 255
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.08 E-value=7.5e-11 Score=92.64 Aligned_cols=78 Identities=15% Similarity=0.230 Sum_probs=61.9
Q ss_pred EEcccchHHHhhcCCCcEEEEEECCCChhHHHHHHH-H--HHHHHHhcCCCceEEEEEeCCCC-CC-CCC--------CC
Q 023747 152 IVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQ-I--EKLAKHFKGLDNLVIAKIDASAN-EH-PKL--------QV 218 (278)
Q Consensus 152 ~l~~~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~-~--~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~--------~i 218 (278)
....+.|.... ..+++++|.||++||++|+.+.+. | .+++..++. ++.++.||.++. ++ ..| ++
T Consensus 26 ~~~~ea~~~A~-~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~--~fv~ikVD~de~~~l~~~y~~~~q~~~gv 102 (173)
T 3ira_A 26 PWGEEAFEKAR-KENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNE--AFVSIKVDREERPDIDNIYMTVCQIILGR 102 (173)
T ss_dssp CSSHHHHHHHH-HHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHH--HCEEEEEETTTCHHHHHHHHHHHHHHHSC
T ss_pred CcCHHHHHHHH-HhCCCEEEecccchhHhhccccccccCCHHHHHHHHh--cCceeeeCCcccCcHHHHHHHHHHHHcCC
Confidence 34456666643 668999999999999999999983 3 477777765 699999999987 66 356 89
Q ss_pred cCCCeEEEEe-CCCc
Q 023747 219 EEYPTLLFYP-AGDK 232 (278)
Q Consensus 219 ~~~Ptl~~f~-~g~~ 232 (278)
.++|++++|. +|+.
T Consensus 103 ~g~Pt~v~l~~dG~~ 117 (173)
T 3ira_A 103 GGWPLNIIMTPGKKP 117 (173)
T ss_dssp CCSSEEEEECTTSCE
T ss_pred CCCcceeeECCCCCc
Confidence 9999999996 5653
No 256
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.07 E-value=6.4e-10 Score=85.28 Aligned_cols=88 Identities=14% Similarity=0.252 Sum_probs=69.3
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCC-------------------------C-CC-CCCC
Q 023747 165 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA-------------------------N-EH-PKLQ 217 (278)
Q Consensus 165 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~-------------------------~-~~-~~~~ 217 (278)
.+++++|.||++||++|....+.+.+++..+.+. ++.++.|+++. + ++ ..|+
T Consensus 28 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~-~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 106 (152)
T 2lrn_A 28 KGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDK-GFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESYC 106 (152)
T ss_dssp TTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTT-TEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHTT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhccC-CeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHHhC
Confidence 4789999999999999999999999999999863 59999999886 2 33 3789
Q ss_pred CcCCCeEEEEe-CCCccCceEecCCCCHHHHHHHHHHHhccc
Q 023747 218 VEEYPTLLFYP-AGDKANPIKVSARSSSKNIAAFIKEQLKEK 258 (278)
Q Consensus 218 i~~~Ptl~~f~-~g~~~~~~~~~g~~~~~~l~~~i~~~~~~~ 258 (278)
+..+|+++++. +|+.+. .+ .+.+.+.++|++.+...
T Consensus 107 v~~~P~~~lid~~G~i~~--~~---~~~~~l~~~l~~l~~~~ 143 (152)
T 2lrn_A 107 IVGFPHIILVDPEGKIVA--KE---LRGDDLYNTVEKFVNGA 143 (152)
T ss_dssp CCSSCEEEEECTTSEEEE--EC---CCTTHHHHHHHHHHTSS
T ss_pred CCcCCeEEEECCCCeEEE--ee---CCHHHHHHHHHHHHhhc
Confidence 99999999994 454321 22 35578888888777643
No 257
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.07 E-value=9e-10 Score=83.25 Aligned_cols=88 Identities=8% Similarity=0.114 Sum_probs=73.7
Q ss_pred cCCceEEEEEeCc-cchHHHHHHHHHHHHHhc-CceEEEEEeCCCcc----------------------cchhHHHHcCC
Q 023747 36 IDTLDMVYVFAKA-DDLKSLLEPLEDIARNFK-GKIMFTAVDIADED----------------------LAKPFLTLFGL 91 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~-~~v~f~~vd~~~~~----------------------~~~~l~~~~~i 91 (278)
.+++++|.||++| ++|+...|.+.++++++. ..+.|+.|+++..+ ....+++.|+|
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 112 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGELMKEYHI 112 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSSSHHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCchhHHHhcCc
Confidence 7789999999999 999999999999999998 45999999986410 01589999999
Q ss_pred CCCCceEEEEecCCcceeecCCCCCChHHHHHHH
Q 023747 92 EESKNTVVTAFDNKAISKFLLESDLTPSNIEEFC 125 (278)
Q Consensus 92 ~~~~Ptl~~~~~~~~~~~~~~~g~~~~~~i~~fi 125 (278)
.++ |++ .+++.++...+.+.|..+.+.+.+++
T Consensus 113 ~~~-P~~-~lid~~G~i~~~~~g~~~~~~l~~~l 144 (145)
T 3erw_A 113 ITI-PTS-FLLNEKGEIEKTKIGPMTAEQLKEWT 144 (145)
T ss_dssp CEE-SEE-EEECTTCCEEEEEESCCCHHHHHHHH
T ss_pred Ccc-CeE-EEEcCCCcEEEEEcCCcCHHHHHHhh
Confidence 999 999 77765555566678899999998876
No 258
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.06 E-value=6.2e-10 Score=85.98 Aligned_cols=92 Identities=15% Similarity=0.354 Sum_probs=71.4
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCC-------------------C-CC-CCCCCcCCCe
Q 023747 165 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA-------------------N-EH-PKLQVEEYPT 223 (278)
Q Consensus 165 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~-------------------~-~~-~~~~i~~~Pt 223 (278)
.+++++|.||++||++|....+.+.+++..+... ++.++.|+++. + ++ ..|++..+|+
T Consensus 40 ~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~ 118 (158)
T 3hdc_A 40 RGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKG-DLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRYGANRLPD 118 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTT-SEEEEEEECSSSCCGGGGGCCCSCEEEECTTSHHHHHTTCCSSSE
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccC-CeEEEEEeCCHHHHHHHHHcCCCceEEECchHHHHHHhCCCCcce
Confidence 4689999999999999999999999999999853 69999999887 2 33 4679999999
Q ss_pred EEEEeCCCccCceEecCC--CCHHHHHHHHHHHhccc
Q 023747 224 LLFYPAGDKANPIKVSAR--SSSKNIAAFIKEQLKEK 258 (278)
Q Consensus 224 l~~f~~g~~~~~~~~~g~--~~~~~l~~~i~~~~~~~ 258 (278)
++++..++.+ ..++.|. .+..++++.+.+..++.
T Consensus 119 ~~lid~~G~i-~~~~~G~~~~~~~~~~~~~~~~~~~~ 154 (158)
T 3hdc_A 119 TFIVDRKGII-RQRVTGGIEWDAPKVVSYLKSLEGHH 154 (158)
T ss_dssp EEEECTTSBE-EEEEESCCCTTSHHHHHHHHTTC---
T ss_pred EEEEcCCCCE-EEEEeCCCccchHHHHHHHHhhcccc
Confidence 8888544444 2367775 56688888887766653
No 259
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.06 E-value=1.5e-10 Score=83.68 Aligned_cols=73 Identities=8% Similarity=-0.085 Sum_probs=60.1
Q ss_pred CceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCC------CcccchhHHHHcCCCCCCceEEEEecCCcceee
Q 023747 38 TLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIA------DEDLAKPFLTLFGLEESKNTVVTAFDNKAISKF 110 (278)
Q Consensus 38 ~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~------~~~~~~~l~~~~~i~~~~Ptl~~~~~~~~~~~~ 110 (278)
++.+|.||++| ++|+.+.|.|++++..++ .|||+ .. +.+|++|||.++ ||+ .+ ++ ..
T Consensus 13 k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~------~v~~~~~~~~~~~---~~l~~~~~V~~~-PT~-~i-~G---~~- 76 (106)
T 3kp8_A 13 QIGGTMYGAYWCPHCQDQKELFGAAFDQVP------YVECSPNGPGTPQ---AQECTEAGITSY-PTW-II-NG---RT- 76 (106)
T ss_dssp HHTCEEEECTTCHHHHHHHHHHGGGGGGSC------EEESCTTCTTSCC---CHHHHHTTCCSS-SEE-EE-TT---EE-
T ss_pred CCEEEEEECCCCHHHHHHHHHHHHHHHhCC------EEEEecccccchh---HHHHHHcCCeEe-CEE-EE-CC---EE-
Confidence 45789999999 999999999999998775 56666 34 789999999999 999 55 33 23
Q ss_pred cCCCCCChHHHHHHHHH
Q 023747 111 LLESDLTPSNIEEFCSR 127 (278)
Q Consensus 111 ~~~g~~~~~~i~~fi~~ 127 (278)
+.|.++.++|.+|+.-
T Consensus 77 -~~G~~~~~~l~~~~~~ 92 (106)
T 3kp8_A 77 -YTGVRSLEALAVASGY 92 (106)
T ss_dssp -EESCCCHHHHHHHHTC
T ss_pred -ecCCCCHHHHHHHhCC
Confidence 4899999999998743
No 260
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.06 E-value=1.6e-09 Score=80.76 Aligned_cols=90 Identities=11% Similarity=0.200 Sum_probs=74.7
Q ss_pred cCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCc--------------------ccchhHHHHcCCCCC
Q 023747 36 IDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADE--------------------DLAKPFLTLFGLEES 94 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~--------------------~~~~~l~~~~~i~~~ 94 (278)
.++++++.||++| ++|+...|.+.++++++. .+.|+.|+++.. +....+++.|||.++
T Consensus 24 ~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~ 102 (136)
T 1zzo_A 24 LGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP-EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQ 102 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTTCHHHHHTTCCSS
T ss_pred CCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC-CeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcCCcHHHHHcCCCCC
Confidence 4678999999999 999999999999999998 699999998641 111689999999999
Q ss_pred CceEEEEecCCcceeecCCCCCChHHHHHHHHHHh
Q 023747 95 KNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLL 129 (278)
Q Consensus 95 ~Ptl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 129 (278)
|++ .+++.++... .+.|..+.+++.+++++.+
T Consensus 103 -P~~-~~id~~g~i~-~~~g~~~~~~l~~~l~~~l 134 (136)
T 1zzo_A 103 -PAY-AFVDPHGNVD-VVRGRMSQDELTRRVTALT 134 (136)
T ss_dssp -SEE-EEECTTCCEE-EEESCCCHHHHHHHHHHHC
T ss_pred -ceE-EEECCCCCEE-EEecCCCHHHHHHHHHHHh
Confidence 999 7776444344 5688899999999998875
No 261
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.05 E-value=8.6e-10 Score=85.71 Aligned_cols=86 Identities=15% Similarity=0.325 Sum_probs=69.6
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCC------------------CC---------------
Q 023747 165 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDAS------------------AN--------------- 211 (278)
Q Consensus 165 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~------------------~~--------------- 211 (278)
.+++++|.||++||++|....+.+.++...+. ++.|+.|+++ ..
T Consensus 36 ~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~---~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (165)
T 3ha9_A 36 GGDVVILWFMAAWCPSCVYMADLLDRLTEKYR---EISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDPS 112 (165)
T ss_dssp CSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT---TEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCTT
T ss_pred CCCEEEEEEECCCCcchhhhHHHHHHHHHHcC---CcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCCCC
Confidence 46899999999999999999999999999998 5999999987 22
Q ss_pred --------CC-CCCCCcCCCeEEEEeCCCccCceEecCCC-CHHHHHHHHHHHhc
Q 023747 212 --------EH-PKLQVEEYPTLLFYPAGDKANPIKVSARS-SSKNIAAFIKEQLK 256 (278)
Q Consensus 212 --------~~-~~~~i~~~Ptl~~f~~g~~~~~~~~~g~~-~~~~l~~~i~~~~~ 256 (278)
++ ..|++..+|+++++..++.+ .+.|.. +.+.|.++|++.++
T Consensus 113 ~~~~~d~~~~~~~~~v~~~P~~~lid~~G~i---~~~g~~~~~~~l~~~l~~l~~ 164 (165)
T 3ha9_A 113 WIMVMDDGSLVEKFNVRSIDYIVIMDKSSNV---LYAGTTPSLGELESVIKSVQG 164 (165)
T ss_dssp SEEEECCSHHHHHTTCCSSSEEEEEETTCCE---EEEEESCCHHHHHHHHHHC--
T ss_pred eeEEeChHHHHHHhCCCCceEEEEEcCCCcE---EEeCCCCCHHHHHHHHHHHhc
Confidence 22 35789999999999654443 337777 89999999987653
No 262
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.04 E-value=5.2e-10 Score=87.78 Aligned_cols=91 Identities=11% Similarity=0.066 Sum_probs=73.1
Q ss_pred ecCCceEEEEEeCc-cchHHHHHHH---HHHHHHhcCceEEEEEeCCCcccchhH-------------------------
Q 023747 35 QIDTLDMVYVFAKA-DDLKSLLEPL---EDIARNFKGKIMFTAVDIADEDLAKPF------------------------- 85 (278)
Q Consensus 35 ~~~~~~~v~F~~~~-~~c~~~~~~~---~~la~~~~~~v~f~~vd~~~~~~~~~l------------------------- 85 (278)
..+++++|.||++| ++|+.+.+.+ .++.+.+++.+.|+.||+++. ..+
T Consensus 45 ~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~~~~~v~v~~d~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (172)
T 3f9u_A 45 QHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINNDYVLITLYVDNK---TPLTEPVKIMENGTERTLRTVGDKWSYL 121 (172)
T ss_dssp HTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEETTCC---CEEEEEEEEEETTEEEEEEEHHHHHHHH
T ss_pred HcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCCEEEEEEecCcc---cccchhhhhhhcchhhhhhhhhhhhhHH
Confidence 45789999999999 9999975555 666776766799999999877 434
Q ss_pred -HHHcCCCCCCceEEEEecCCcceeecCCCCCC-hHHHHHHHHHHhc
Q 023747 86 -LTLFGLEESKNTVVTAFDNKAISKFLLESDLT-PSNIEEFCSRLLH 130 (278)
Q Consensus 86 -~~~~~i~~~~Ptl~~~~~~~~~~~~~~~g~~~-~~~i~~fi~~~~~ 130 (278)
++.|+|.++ ||+ .+++.++.....+.|..+ .+++.+++++.++
T Consensus 122 ~~~~~~v~~~-Pt~-~lid~~G~~~~~~~G~~~~~~~l~~~l~~~l~ 166 (172)
T 3f9u_A 122 QRVKFGANAQ-PFY-VLIDNEGNPLNKSYAYDEDISKYINFLQTGLE 166 (172)
T ss_dssp HHHHHSCCCS-SEE-EEECTTSCBSSCCBCSCCCHHHHHHHHHHHHH
T ss_pred HHHHcCCCCc-ceE-EEECCCCCEEeeccCCCCCHHHHHHHHHHHHH
Confidence 789999999 999 777654445555678887 9999999998763
No 263
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.04 E-value=3e-09 Score=82.33 Aligned_cols=91 Identities=11% Similarity=0.207 Sum_probs=77.9
Q ss_pred cCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCc-eEEEEEeCCCcccchhHHHHc------------------------
Q 023747 36 IDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGK-IMFTAVDIADEDLAKPFLTLF------------------------ 89 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~-v~f~~vd~~~~~~~~~l~~~~------------------------ 89 (278)
.+++++|.||++| ++|+...|.+.++++++++. +.|+.|+++.. ...+++|
T Consensus 33 ~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (165)
T 3or5_A 33 KGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQ---LPNVKNYMKTQGIIYPVMMATPELIRAFNGY 109 (165)
T ss_dssp TTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCC---HHHHHHHHHHHTCCSCEEECCHHHHHHHHTT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCC---HHHHHHHHHHcCCCCceEecCHHHHHHHhhh
Confidence 4578999999999 99999999999999999876 99999999987 6666666
Q ss_pred ---CCCCCCceEEEEecCCcceeecCCCCCChHHHHHHHHHHhcC
Q 023747 90 ---GLEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHG 131 (278)
Q Consensus 90 ---~i~~~~Ptl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~ 131 (278)
++.++ |++ .+++.++...+.+.|..+.+++.+++++.++.
T Consensus 110 ~~~~i~~~-P~~-~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~~ 152 (165)
T 3or5_A 110 IDGGITGI-PTS-FVIDASGNVSGVIVGPRSKADFDRIVKMALGA 152 (165)
T ss_dssp STTCSCSS-SEE-EEECTTSBEEEEECSCCCHHHHHHHHHHHHC-
T ss_pred hccCCCCC-CeE-EEECCCCcEEEEEcCCCCHHHHHHHHHHHHhh
Confidence 89999 999 77765555566678999999999999998854
No 264
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.04 E-value=1e-10 Score=97.05 Aligned_cols=103 Identities=14% Similarity=0.136 Sum_probs=77.8
Q ss_pred ccccc-CCCCceeeeeeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCC
Q 023747 18 TLISN-LPTTSLELLKVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESK 95 (278)
Q Consensus 18 ~~v~~-~~~~~~~~~~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~ 95 (278)
.++.+ +..++...+.....+.+++|.||++| ++|+.+.|.|.++|.+|.+ +.|+.||++. ..++.+|+|.++
T Consensus 113 ~V~ei~s~~~f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~~-v~f~kVd~d~----~~l~~~~~I~~~- 186 (245)
T 1a0r_P 113 FVYELESGEQFLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYPM-VKFCKIKASN----TGAGDRFSSDVL- 186 (245)
T ss_dssp SEEECCSHHHHHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCTT-SEEEEEEHHH----HCCTTSSCTTTC-
T ss_pred eEEEeCCHHHHHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCC-CEEEEEeCCc----HHHHHHCCCCCC-
Confidence 45555 45556555544345789999999999 9999999999999999987 9999999975 368899999999
Q ss_pred ceEEEEecCCcceeecCCC------C-CChHHHHHHHHHH
Q 023747 96 NTVVTAFDNKAISKFLLES------D-LTPSNIEEFCSRL 128 (278)
Q Consensus 96 Ptl~~~~~~~~~~~~~~~g------~-~~~~~i~~fi~~~ 128 (278)
||+ .+|.+|... ..+.| . .+.+.|..|+.+.
T Consensus 187 PTl-l~~~~G~~v-~~~vG~~~~~g~~~~~e~Le~~L~~~ 224 (245)
T 1a0r_P 187 PTL-LVYKGGELL-SNFISVTEQLAEEFFTGDVESFLNEY 224 (245)
T ss_dssp SEE-EEEETTEEE-EEETTGGGGSCTTCCHHHHHHHHHTT
T ss_pred CEE-EEEECCEEE-EEEeCCcccccccccHHHHHHHHHHc
Confidence 999 555554321 11222 2 5778899999874
No 265
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.04 E-value=2.6e-09 Score=81.70 Aligned_cols=95 Identities=6% Similarity=0.098 Sum_probs=78.2
Q ss_pred cCCceEEEEEeCc-cchHHHHHHHHHHHHHhcC-ceEEEEEeCCCc---------------------ccchhHHHHcC--
Q 023747 36 IDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKG-KIMFTAVDIADE---------------------DLAKPFLTLFG-- 90 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~-~v~f~~vd~~~~---------------------~~~~~l~~~~~-- 90 (278)
.+++++|.||++| ++|+...|.+.+++++|++ .+.|+.|+++.. .....+++.||
T Consensus 23 ~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (151)
T 3raz_A 23 KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFMKTYGNT 102 (151)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHHHTTTCC
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHHHHhCCc
Confidence 4578999999999 9999999999999999964 499999998621 11256888999
Q ss_pred CCCCCceEEEEecCCcceeecCCCCCChHHHHHHHHHHhcCc
Q 023747 91 LEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHGT 132 (278)
Q Consensus 91 i~~~~Ptl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~~ 132 (278)
+.++ |++ .+++.++...+.+.|..+.+++.++++++..+.
T Consensus 103 v~~~-P~~-~lid~~G~i~~~~~g~~~~~~l~~~l~~l~~~~ 142 (151)
T 3raz_A 103 VGVL-PFT-VVEAPKCGYRQTITGEVNEKSLTDAVKLAHSKC 142 (151)
T ss_dssp SCCS-SEE-EEEETTTTEEEECCSCCCHHHHHHHHHHHHTC-
T ss_pred cCCC-CEE-EEECCCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 8899 999 777666566777899999999999999987654
No 266
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.03 E-value=4.4e-10 Score=86.31 Aligned_cols=86 Identities=19% Similarity=0.365 Sum_probs=67.8
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC------------------------CC-CCCCCc
Q 023747 165 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN------------------------EH-PKLQVE 219 (278)
Q Consensus 165 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~------------------------~~-~~~~i~ 219 (278)
.+++++|.||++||++|..+.+.+.+++.. + ++.+..|+++.. .+ ..|++.
T Consensus 41 ~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~--~--~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 116 (156)
T 1kng_A 41 KGKVSLVNVWASWCVPCHDEAPLLTELGKD--K--RFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASIEWGVY 116 (156)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHTTC--T--TSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTTCC
T ss_pred CCCEEEEEEEcccCHhHHHHHHHHHHHHhc--C--CeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHHHhcCcC
Confidence 378999999999999999999999998776 2 588888876432 22 357999
Q ss_pred CCCeEEEE-eCCCccCceEecCCCCHHHHHHHHHHHhc
Q 023747 220 EYPTLLFY-PAGDKANPIKVSARSSSKNIAAFIKEQLK 256 (278)
Q Consensus 220 ~~Ptl~~f-~~g~~~~~~~~~g~~~~~~l~~~i~~~~~ 256 (278)
++|+++++ ++|+.. ..+.|..+.+.+.++|.+.+.
T Consensus 117 ~~P~~~~id~~G~i~--~~~~g~~~~~~l~~~l~~~l~ 152 (156)
T 1kng_A 117 GVPETFVVGREGTIV--YKLVGPITPDNLRSVLLPQME 152 (156)
T ss_dssp SSCEEEEECTTSBEE--EEEESCCCHHHHHHTHHHHHH
T ss_pred ccCeEEEEcCCCCEE--EEEeCCCCHHHHHHHHHHHHH
Confidence 99987777 555433 367899999999999988765
No 267
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.03 E-value=8.2e-10 Score=84.63 Aligned_cols=92 Identities=13% Similarity=0.275 Sum_probs=69.9
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC------------------------CC-CCCCCc
Q 023747 165 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN------------------------EH-PKLQVE 219 (278)
Q Consensus 165 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~------------------------~~-~~~~i~ 219 (278)
.+++++|.||++||++|....+.+.+++..+.+. ++.++.|+++.+ .+ ..|++.
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 105 (154)
T 3kcm_A 27 KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGK-PFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLYGTT 105 (154)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTS-SEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHHHHTCC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccC-CeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHHHhCCC
Confidence 4789999999999999999999999999999764 588999988864 12 357899
Q ss_pred CCCeEEEEeCCCccCceEecCCC--CHHHHHHHHHHHhccc
Q 023747 220 EYPTLLFYPAGDKANPIKVSARS--SSKNIAAFIKEQLKEK 258 (278)
Q Consensus 220 ~~Ptl~~f~~g~~~~~~~~~g~~--~~~~l~~~i~~~~~~~ 258 (278)
.+|+++++..++++ ...+.|.. +.+.+.++|++..+..
T Consensus 106 ~~P~~~lid~~G~i-~~~~~g~~~~~~~~l~~~l~~l~~~~ 145 (154)
T 3kcm_A 106 GVPETFVIDRHGVI-LKKVVGAMEWDHPEVIAFLNNELSKA 145 (154)
T ss_dssp SBCEEEEECTTSBE-EEEEESCCCTTSHHHHHHHHTC----
T ss_pred CCCeEEEECCCCcE-EEEEcCCCccccHHHHHHHHHHHHHh
Confidence 99988888544433 22567764 6679999998766543
No 268
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.02 E-value=2.1e-09 Score=82.11 Aligned_cols=95 Identities=12% Similarity=0.183 Sum_probs=78.2
Q ss_pred cCCceEEEEEeCc-cchHHHHHHHHHHHHHhcC-ceEEEEEeCCCcc-------------------cchhHHHHcCCCCC
Q 023747 36 IDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKG-KIMFTAVDIADED-------------------LAKPFLTLFGLEES 94 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~-~v~f~~vd~~~~~-------------------~~~~l~~~~~i~~~ 94 (278)
.+++++|.||++| ++|+...|.+.++++++.+ .+.|+.|+++... ....+++.|+|.++
T Consensus 25 ~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 104 (151)
T 2f9s_A 25 KGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVSPL 104 (151)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTTCCSS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcCCCCC
Confidence 4578999999999 9999999999999999986 4999999987531 01479999999999
Q ss_pred CceEEEEecCCcceeecCCCCCChHHHHHHHHHHhcCc
Q 023747 95 KNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHGT 132 (278)
Q Consensus 95 ~Ptl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~~ 132 (278)
|++ .+++.++...+.+.|..+.+.+.++++.++.+.
T Consensus 105 -P~~-~lid~~G~i~~~~~G~~~~~~l~~~l~~ll~~~ 140 (151)
T 2f9s_A 105 -PTT-FLINPEGKVVKVVTGTMTESMIHDYMNLIKPGE 140 (151)
T ss_dssp -CEE-EEECTTSEEEEEEESCCCHHHHHHHHHHHSCC-
T ss_pred -CeE-EEECCCCcEEEEEeCCCCHHHHHHHHHHHHhhh
Confidence 999 777655555666678899999999999988654
No 269
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.02 E-value=1.9e-09 Score=72.54 Aligned_cols=72 Identities=11% Similarity=0.190 Sum_probs=60.5
Q ss_pred EEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCceEEEEecCCcceeecCCCCC-Ch
Q 023747 41 MVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFDNKAISKFLLESDL-TP 118 (278)
Q Consensus 41 ~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Ptl~~~~~~~~~~~~~~~g~~-~~ 118 (278)
.|.||++| ++|+.+.|.++++++++.+.+.++.+| + .+++++|||.++ ||+ .+ +|. ... .|.. +.
T Consensus 3 ~v~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~---~---~~~~~~~~v~~~-Pt~-~~-~G~--~~~--~G~~~~~ 69 (77)
T 1ilo_A 3 KIQIYGTGCANCQMLEKNAREAVKELGIDAEFEKIK---E---MDQILEAGLTAL-PGL-AV-DGE--LKI--MGRVASK 69 (77)
T ss_dssp EEEEECSSSSTTHHHHHHHHHHHHHTTCCEEEEEEC---S---HHHHHHHTCSSS-SCE-EE-TTE--EEE--CSSCCCH
T ss_pred EEEEEcCCChhHHHHHHHHHHHHHHcCCceEEEEec---C---HHHHHHCCCCcC-CEE-EE-CCE--EEE--cCCCCCH
Confidence 57899999 999999999999999999889999999 4 789999999999 999 55 332 223 3776 88
Q ss_pred HHHHHHH
Q 023747 119 SNIEEFC 125 (278)
Q Consensus 119 ~~i~~fi 125 (278)
+++.+++
T Consensus 70 ~~l~~~l 76 (77)
T 1ilo_A 70 EEIKKIL 76 (77)
T ss_dssp HHHHHHC
T ss_pred HHHHHHh
Confidence 8888775
No 270
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=98.99 E-value=3.6e-09 Score=80.81 Aligned_cols=95 Identities=14% Similarity=0.165 Sum_probs=79.0
Q ss_pred cCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCc-eEEEEEeCCCccc--------------------chhHHHHcCCCC
Q 023747 36 IDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGK-IMFTAVDIADEDL--------------------AKPFLTLFGLEE 93 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~-v~f~~vd~~~~~~--------------------~~~l~~~~~i~~ 93 (278)
.+++++|.||++| ++|+...|.+.++++++.+. +.|+.|+++.... ...+++.|+|.+
T Consensus 29 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 108 (152)
T 2lja_A 29 KGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYLING 108 (152)
T ss_dssp TTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTTCCS
T ss_pred CCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcCcCC
Confidence 4578999999999 99999999999999999874 9999999887620 127999999999
Q ss_pred CCceEEEEecCCcceeecCCCCCChHHHHHHHHHHhcCc
Q 023747 94 SKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHGT 132 (278)
Q Consensus 94 ~~Ptl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~~ 132 (278)
+ |++ .+++..+...+.+.|..+.+.+.++++......
T Consensus 109 ~-P~~-~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~~ 145 (152)
T 2lja_A 109 I-PRF-ILLDRDGKIISANMTRPSDPKTAEKFNELLGLE 145 (152)
T ss_dssp S-CCE-EEECTTSCEEESSCCCTTCHHHHHHHHHHHTCC
T ss_pred C-CEE-EEECCCCeEEEccCCCCCHHHHHHHHHHHhccc
Confidence 9 999 777755456666788889999999999987543
No 271
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=98.98 E-value=2.6e-10 Score=82.28 Aligned_cols=89 Identities=10% Similarity=0.024 Sum_probs=69.5
Q ss_pred eeeeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchh----HHHHcCCC-CCCceEEEEec
Q 023747 30 LLKVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKP----FLTLFGLE-ESKNTVVTAFD 103 (278)
Q Consensus 30 ~~~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~----l~~~~~i~-~~~Ptl~~~~~ 103 (278)
+.+..+.+++++|.|++.| ++|+.+.|.+++++.. +.+.|.+||.++. ++ ++.+|||+ .. ||+ .++.
T Consensus 17 f~~ii~~~~~vvi~khatwCgpc~~~~~~~e~~~~~--~~v~~~~vdVde~---r~~Sn~IA~~~~V~h~s-Pq~-il~k 89 (112)
T 3iv4_A 17 FEQVIEENKYVFVLKHSETCPISANAYDQFNKFLYE--RDMDGYYLIVQQE---RDLSDYIAKKTNVKHES-PQA-FYFV 89 (112)
T ss_dssp HHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHH--HTCCEEEEEGGGG---HHHHHHHHHHHTCCCCS-SEE-EEEE
T ss_pred HHHHHhcCCCEEEEEECCcCHhHHHHHHHHHHHhcc--CCceEEEEEeecC---chhhHHHHHHhCCccCC-CeE-EEEE
Confidence 4445556889999999999 9999999999999985 5699999999988 66 79999999 48 999 5555
Q ss_pred CCcceeecCCCCCChHHHHHHH
Q 023747 104 NKAISKFLLESDLTPSNIEEFC 125 (278)
Q Consensus 104 ~~~~~~~~~~g~~~~~~i~~fi 125 (278)
+|...--..-+.++.+.|.+.+
T Consensus 90 ~G~~v~~~SH~~I~~~~l~~~~ 111 (112)
T 3iv4_A 90 NGEMVWNRDHGDINVSSLAQAE 111 (112)
T ss_dssp TTEEEEEEEGGGCSHHHHHHHT
T ss_pred CCEEEEEeeccccCHHHHHHhh
Confidence 5543222234568888777654
No 272
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=98.96 E-value=2.1e-09 Score=93.95 Aligned_cols=91 Identities=12% Similarity=0.255 Sum_probs=73.5
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCC---------------------------C-CC-CC
Q 023747 165 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA---------------------------N-EH-PK 215 (278)
Q Consensus 165 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~---------------------------~-~~-~~ 215 (278)
.+++++|.||++||++|+.+.|.+.++++.++.. ++.++.|+++. + .+ ..
T Consensus 81 ~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~-~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~~ 159 (352)
T 2hyx_A 81 RGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDS-GLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATWTN 159 (352)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG-TEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHHHHH
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcC-CeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHHHHH
Confidence 3789999999999999999999999999999753 58999998753 1 22 36
Q ss_pred CCCcCCCeEEEEeCCCccCceEecCCCCHHHHHHHHHHHhcc
Q 023747 216 LQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKE 257 (278)
Q Consensus 216 ~~i~~~Ptl~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~~~ 257 (278)
|++..+|+++++..++++ ...+.|..+.+.+.++|++.+..
T Consensus 160 ygV~~~Pt~~lID~~G~I-v~~~~G~~~~~~l~~~I~~lL~e 200 (352)
T 2hyx_A 160 YRNRYWPAEYLIDATGTV-RHIKFGEGDYNVTETLVRQLLND 200 (352)
T ss_dssp TTCCEESEEEEECTTSBE-EEEEESBCCHHHHHHHHHHHHHH
T ss_pred cCCCccCEEEEEeCCCeE-EEEEcCCCCHHHHHHHHHHHHhh
Confidence 789999999999444433 23678989999999999988753
No 273
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=98.95 E-value=2.5e-09 Score=82.18 Aligned_cols=84 Identities=10% Similarity=0.127 Sum_probs=65.8
Q ss_pred CCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-C-----------------------C-CCCCCcC
Q 023747 166 HKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-E-----------------------H-PKLQVEE 220 (278)
Q Consensus 166 ~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~-----------------------~-~~~~i~~ 220 (278)
+++++|.||++||++|....|.+.+++..+.+. ++.++.|+++.. + + ..|++..
T Consensus 35 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~-~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~ 113 (152)
T 2lrt_A 35 GKVVLIDFTVYNNAMSAAHNLALRELYNKYASQ-GFEIYQISLDGDEHFWKTSADNLPWVCVRDANGAYSSYISLYNVTN 113 (152)
T ss_dssp GSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG-TEEEEEEECSCCHHHHHHHHTTCSSEEEECSSGGGCHHHHHHTCCS
T ss_pred CCEEEEEEEcCCChhhHHHHHHHHHHHHHhccC-CeEEEEEEccCCHHHHHHHHhCCCceEEECCCCcchHHHHHcCccc
Confidence 689999999999999999999999999999863 499999998865 2 3 2568899
Q ss_pred CCeEEEEeCCCccCceEecCCCCHHHHHHHH
Q 023747 221 YPTLLFYPAGDKANPIKVSARSSSKNIAAFI 251 (278)
Q Consensus 221 ~Ptl~~f~~g~~~~~~~~~g~~~~~~l~~~i 251 (278)
+|+++++..++.+ ..++.|..+.+....-+
T Consensus 114 ~P~~~lid~~G~i-~~~~~g~~~~e~~~~~~ 143 (152)
T 2lrt_A 114 LPSVFLVNRNNEL-SARGENIKDLDEAIKKL 143 (152)
T ss_dssp CSEEEEEETTTEE-EEETTTCSCHHHHHHHH
T ss_pred CceEEEECCCCeE-EEecCCHHHHHHHHHHH
Confidence 9999999644444 23667777766555443
No 274
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=98.95 E-value=8.6e-09 Score=78.74 Aligned_cols=93 Identities=12% Similarity=0.066 Sum_probs=76.9
Q ss_pred cCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCc-eEEEEEeCC-----------------------CcccchhHHHHcC
Q 023747 36 IDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGK-IMFTAVDIA-----------------------DEDLAKPFLTLFG 90 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~-v~f~~vd~~-----------------------~~~~~~~l~~~~~ 90 (278)
.+++++|.||++| ++|+...|.+.++++++++. +.|+.|+.+ .. ..+++.||
T Consensus 27 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~---~~~~~~~~ 103 (153)
T 2l5o_A 27 QGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDAD---KAVGQAFG 103 (153)
T ss_dssp TTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSS---CHHHHHHT
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCch---HHHHHHcC
Confidence 4678999999999 99999999999999999864 888777642 33 68999999
Q ss_pred CCCCCceEEEEecCCcceeecCCCCCChHHHHHHHHHHhcCcc
Q 023747 91 LEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHGTL 133 (278)
Q Consensus 91 i~~~~Ptl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~~~ 133 (278)
|.++ |++ .+++.++...+.+.|..+.+.+.++++..+.+..
T Consensus 104 i~~~-P~~-~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~~~~ 144 (153)
T 2l5o_A 104 TQVY-PTS-VLIGKKGEILKTYVGEPDFGKLYQEIDTAWRNSD 144 (153)
T ss_dssp CCSS-SEE-EEECSSSCCCEEEESSCCHHHHHHHHHHHHHCCS
T ss_pred CCcc-CeE-EEECCCCcEEEEEcCCCCHHHHHHHHHHHHHhhh
Confidence 9999 999 7776554455556888999999999999987643
No 275
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=98.93 E-value=3e-09 Score=82.94 Aligned_cols=66 Identities=24% Similarity=0.368 Sum_probs=55.7
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-C------------------------C-CCCCC
Q 023747 165 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-E------------------------H-PKLQV 218 (278)
Q Consensus 165 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~------------------------~-~~~~i 218 (278)
.+++++|.||++||++|+.+.|.+.++++.++...++.++.|+++.. + + ..|++
T Consensus 47 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 126 (165)
T 3s9f_A 47 SGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALTKKYSV 126 (165)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHHHHcCC
Confidence 37899999999999999999999999999998644788888888765 1 2 36689
Q ss_pred cCCCeEEEEeCC
Q 023747 219 EEYPTLLFYPAG 230 (278)
Q Consensus 219 ~~~Ptl~~f~~g 230 (278)
..+|+++++...
T Consensus 127 ~~~Pt~~lid~~ 138 (165)
T 3s9f_A 127 ESIPTLIGLNAD 138 (165)
T ss_dssp CSSSEEEEEETT
T ss_pred CCCCEEEEEeCC
Confidence 999999999753
No 276
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=98.93 E-value=2.6e-09 Score=81.30 Aligned_cols=67 Identities=21% Similarity=0.333 Sum_probs=56.0
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-------------------------CC-CCCCC
Q 023747 165 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-------------------------EH-PKLQV 218 (278)
Q Consensus 165 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-------------------------~~-~~~~i 218 (278)
.+++++|.||++||++|+.+.|.+.+++..+.+..++.++.|+++.. .+ ..|++
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 106 (146)
T 1o8x_A 27 AGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFNV 106 (146)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTTC
T ss_pred CCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHHHHhCC
Confidence 47899999999999999999999999999998433788999988763 22 36789
Q ss_pred cCCCeEEEEe--CCC
Q 023747 219 EEYPTLLFYP--AGD 231 (278)
Q Consensus 219 ~~~Ptl~~f~--~g~ 231 (278)
..+|+++++. +|+
T Consensus 107 ~~~Pt~~lid~~~G~ 121 (146)
T 1o8x_A 107 ESIPTLIGVDADSGD 121 (146)
T ss_dssp CSSSEEEEEETTTCC
T ss_pred CCCCEEEEEECCCCe
Confidence 9999999997 454
No 277
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=98.93 E-value=2.6e-09 Score=81.02 Aligned_cols=67 Identities=19% Similarity=0.294 Sum_probs=56.0
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-------------------------CC-CCCCC
Q 023747 165 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-------------------------EH-PKLQV 218 (278)
Q Consensus 165 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-------------------------~~-~~~~i 218 (278)
.+++++|.||++||++|+.+.|.+.++++.+....++.++.|+++.. .+ ..|++
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 106 (144)
T 1i5g_A 27 AGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLTTGFDV 106 (144)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHHHHHHcCC
Confidence 46899999999999999999999999999998433789999988763 12 36789
Q ss_pred cCCCeEEEEe--CCC
Q 023747 219 EEYPTLLFYP--AGD 231 (278)
Q Consensus 219 ~~~Ptl~~f~--~g~ 231 (278)
..+|+++++. +|+
T Consensus 107 ~~~P~~~lid~~~G~ 121 (144)
T 1i5g_A 107 KSIPTLVGVEADSGN 121 (144)
T ss_dssp CSSSEEEEEETTTCC
T ss_pred CCCCEEEEEECCCCc
Confidence 9999999997 454
No 278
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=98.93 E-value=1.6e-08 Score=77.32 Aligned_cols=92 Identities=12% Similarity=0.078 Sum_probs=73.7
Q ss_pred cCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCc-eEEEEEeCCCccc----------------------chhHHHHcCC
Q 023747 36 IDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGK-IMFTAVDIADEDL----------------------AKPFLTLFGL 91 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~-v~f~~vd~~~~~~----------------------~~~l~~~~~i 91 (278)
.+++++|.||++| ++|+...|.+.+++++|.+. +.|+.|+++.... ...+++.|||
T Consensus 28 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v 107 (152)
T 2lrn_A 28 KGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESYCI 107 (152)
T ss_dssp TTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHHhCC
Confidence 4578999999999 99999999999999999875 9999999986210 1689999999
Q ss_pred CCCCceEEEEecCCcceeecCCCCCChHHHHHHHHHHhcCc
Q 023747 92 EESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHGT 132 (278)
Q Consensus 92 ~~~~Ptl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~~ 132 (278)
.++ |++ .+++.++...+.+ .+.+++.+++++++.+.
T Consensus 108 ~~~-P~~-~lid~~G~i~~~~---~~~~~l~~~l~~l~~~~ 143 (152)
T 2lrn_A 108 VGF-PHI-ILVDPEGKIVAKE---LRGDDLYNTVEKFVNGA 143 (152)
T ss_dssp CSS-CEE-EEECTTSEEEEEC---CCTTHHHHHHHHHHTSS
T ss_pred CcC-CeE-EEECCCCeEEEee---CCHHHHHHHHHHHHhhc
Confidence 999 999 7776554444433 35678999999887653
No 279
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=98.92 E-value=2e-09 Score=86.05 Aligned_cols=91 Identities=11% Similarity=0.204 Sum_probs=70.7
Q ss_pred CC-cEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCC-----------------------------C-CC-
Q 023747 166 HK-DVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA-----------------------------N-EH- 213 (278)
Q Consensus 166 ~~-~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~-----------------------------~-~~- 213 (278)
++ +++|.||++||++|....+.+.++...+... ++.+..|+++. + ++
T Consensus 45 gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~-~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~ 123 (196)
T 2ywi_A 45 SDAATVIMFICNHCPFVKHVQHELVRLANDYMPK-GVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDETQEVA 123 (196)
T ss_dssp CSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGG-TCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSCHHH
T ss_pred CCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhC-CcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECCchHHH
Confidence 55 5999999999999999999999999999763 48899998842 2 22
Q ss_pred CCCCCcCCCeEEEEeCCCccCceE---------ecCCCCHHHHHHHHHHHhccc
Q 023747 214 PKLQVEEYPTLLFYPAGDKANPIK---------VSARSSSKNIAAFIKEQLKEK 258 (278)
Q Consensus 214 ~~~~i~~~Ptl~~f~~g~~~~~~~---------~~g~~~~~~l~~~i~~~~~~~ 258 (278)
..|++..+|+++++..++.+ ..+ +.|..+.+.|.++|.+.+..+
T Consensus 124 ~~~~v~~~P~~~lid~~G~i-~~~~~~~~~~~~~~g~~~~~~l~~~i~~ll~~~ 176 (196)
T 2ywi_A 124 KAYDAACTPDFYIFDRDLKC-VYRGQLDDSRPNNGIPVTGESIRAALDALLEGR 176 (196)
T ss_dssp HHHTCCEESEEEEEETTCBE-EEEECSSSCCTTTCCCCCCHHHHHHHHHHHHTC
T ss_pred HHhCCCCCCeEEEEcCCCeE-EEccccCcccccccCccCHHHHHHHHHHHHcCC
Confidence 36789999999999644433 113 346678899999999888643
No 280
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=98.92 E-value=7e-09 Score=78.61 Aligned_cols=88 Identities=9% Similarity=0.062 Sum_probs=72.0
Q ss_pred cCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCc-eEEEEEeCCCcccchh-------------------------HHHH
Q 023747 36 IDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGK-IMFTAVDIADEDLAKP-------------------------FLTL 88 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~-v~f~~vd~~~~~~~~~-------------------------l~~~ 88 (278)
.+++++|.||++| ++|+...|.+.++++++++. +.|+.|+++.. .. +++.
T Consensus 30 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~---~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 106 (148)
T 3hcz_A 30 QAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERK---DEEWLKFIRSKKIGGWLNVRDSKNHTDFKIT 106 (148)
T ss_dssp CCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSS---SHHHHHHHHHHTCTTSEEEECTTCCCCHHHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCC---HHHHHHHHHHcCCCCceEEeccccchhHHHh
Confidence 4578999999999 99999999999999999876 99999999966 45 9999
Q ss_pred cCCCCCCceEEEEecCCcceeecCCCCCChHHHHHHHHHH
Q 023747 89 FGLEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRL 128 (278)
Q Consensus 89 ~~i~~~~Ptl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~ 128 (278)
|+|.++ |++ .+++.++...+.+.|..+.+++.+.+.+.
T Consensus 107 ~~i~~~-P~~-~lid~~G~i~~~~~g~~~~~~~l~~l~~~ 144 (148)
T 3hcz_A 107 YDIYAT-PVL-YVLDKNKVIIAKRIGYENLDDFLVQYEKS 144 (148)
T ss_dssp HCCCSS-CEE-EEECTTCBEEEESCCGGGHHHHHHHHHHH
T ss_pred cCcCCC-CEE-EEECCCCcEEEecCCHHHHHHHHHHHHHH
Confidence 999999 999 77765555566666766666666655554
No 281
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=98.92 E-value=1.3e-08 Score=77.14 Aligned_cols=90 Identities=9% Similarity=0.043 Sum_probs=72.3
Q ss_pred cCCceEEEEEeCc-cchHHHHHHHHHHHHHh-cCc-eEEEEEeCCCccc----------------------chhHHHHcC
Q 023747 36 IDTLDMVYVFAKA-DDLKSLLEPLEDIARNF-KGK-IMFTAVDIADEDL----------------------AKPFLTLFG 90 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~-~~~-v~f~~vd~~~~~~----------------------~~~l~~~~~ 90 (278)
.+++++|.||++| ++|+...|.+.++++++ .+. +.|+.|+++.... ...+++.||
T Consensus 32 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 111 (148)
T 3fkf_A 32 RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQYA 111 (148)
T ss_dssp TTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTT
T ss_pred CCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHHhcC
Confidence 4578999999999 99999999999999999 665 9999998886420 148999999
Q ss_pred CCCCCceEEEEecCCcceeecCCCCCChHHHHHHHHHHhc
Q 023747 91 LEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLH 130 (278)
Q Consensus 91 i~~~~Ptl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 130 (278)
|.++ |++ .+++.++...+.+. +.+++.++++++++
T Consensus 112 v~~~-P~~-~lid~~G~i~~~~~---~~~~l~~~l~~ll~ 146 (148)
T 3fkf_A 112 ILTL-PTN-ILLSPTGKILARDI---QGEALTGKLKELLK 146 (148)
T ss_dssp CCSS-SEE-EEECTTSBEEEESC---CHHHHHHHHHHHC-
T ss_pred CCCc-CEE-EEECCCCeEEEecC---CHHHHHHHHHHHHc
Confidence 9999 999 77765544444332 88999999998764
No 282
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=98.92 E-value=7e-09 Score=77.22 Aligned_cols=91 Identities=13% Similarity=0.059 Sum_probs=74.2
Q ss_pred cCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCc-------------------------ccchhHHHHc
Q 023747 36 IDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADE-------------------------DLAKPFLTLF 89 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~-------------------------~~~~~l~~~~ 89 (278)
.+++++|.||++| ++|....+.+.++++++.+.+.++.|++... +....+++.|
T Consensus 21 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 100 (138)
T 4evm_A 21 KGKKVYLKFWASWCSICLASLPDTDEIAKEAGDDYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKLLETY 100 (138)
T ss_dssp TTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTTTEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTTCHHHHHT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCCCcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcchHHHHHc
Confidence 4578999999999 9999999999999999887899999964321 0015799999
Q ss_pred CCCCCCceEEEEecCCcceeecCCCCCChHHHHHHHHHH
Q 023747 90 GLEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRL 128 (278)
Q Consensus 90 ~i~~~~Ptl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~ 128 (278)
|+.++ |++ .+++.++...+.+.|..+.+++.++++++
T Consensus 101 ~v~~~-P~~-~lid~~G~i~~~~~g~~~~~~l~~~l~~l 137 (138)
T 4evm_A 101 GVRSY-PTQ-AFIDKEGKLVKTHPGFMEKDAILQTLKEL 137 (138)
T ss_dssp TCCSS-SEE-EEECTTCCEEEEEESCCCHHHHHHHHHHC
T ss_pred CcccC-CeE-EEECCCCcEEEeecCCCcHHHHHHHHHhh
Confidence 99999 999 77765555566678889999999998763
No 283
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=98.92 E-value=2.9e-09 Score=83.94 Aligned_cols=86 Identities=19% Similarity=0.299 Sum_probs=66.7
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCC-----------------------C-CC-CCCCCc
Q 023747 165 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA-----------------------N-EH-PKLQVE 219 (278)
Q Consensus 165 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~-----------------------~-~~-~~~~i~ 219 (278)
.+++++|.||++||++|....|.+.+++.. ++.++.|+++. + .+ ..|++.
T Consensus 57 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~-----~v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 131 (176)
T 3kh7_A 57 KGKPALVNVWGTWCPSCRVEHPELTRLAEQ-----GVVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGTLGLDLGVY 131 (176)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHT-----TCEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCHHHHHHTCC
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHC-----CCEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcchHHHHcCCC
Confidence 378999999999999999999999999876 36777777432 1 22 256899
Q ss_pred CCCeEEEEeCCCccCceEecCCCCHHHHHHHHHHHhc
Q 023747 220 EYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLK 256 (278)
Q Consensus 220 ~~Ptl~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~~ 256 (278)
.+|+.+++..++.+ ...+.|..+.+.+.++|.+.+.
T Consensus 132 ~~P~~~lid~~G~i-~~~~~g~~~~~~l~~~l~~~l~ 167 (176)
T 3kh7_A 132 GAPETYLIDKQGII-RHKIVGVVDQKVWREQLAPLYQ 167 (176)
T ss_dssp SSCEEEEECTTCBE-EEEEESCCCHHHHHHHTHHHHH
T ss_pred CCCeEEEECCCCeE-EEEEcCCCCHHHHHHHHHHHHH
Confidence 99988888544444 3377899999999999988775
No 284
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=98.91 E-value=8.8e-09 Score=78.65 Aligned_cols=87 Identities=10% Similarity=0.280 Sum_probs=68.2
Q ss_pred CCCcEEEEEECCCChh--HHHHHHHHHHHHHHh-cCCCceEEEEEeCCCCC--------------------------C-C
Q 023747 165 SHKDVLLEVYTPWCVT--CETTSKQIEKLAKHF-KGLDNLVIAKIDASANE--------------------------H-P 214 (278)
Q Consensus 165 ~~~~~~v~f~~~~c~~--c~~~~~~~~~~a~~~-~~~~~~~~~~vd~~~~~--------------------------~-~ 214 (278)
.+++++|.||++||++ |....|.+.++...+ ++. ++.+..|+++... + .
T Consensus 32 ~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 110 (150)
T 3fw2_A 32 KQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNK-YIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVAK 110 (150)
T ss_dssp TTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCS-SEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHH
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCC-CeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHHH
Confidence 3689999999999999 999999999999999 542 5899999887542 2 3
Q ss_pred CCCCcCCCeEEEEeCCCccCceEecCCCCHHHHHHHHHHHhc
Q 023747 215 KLQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLK 256 (278)
Q Consensus 215 ~~~i~~~Ptl~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~~ 256 (278)
.|++..+|+++++..++.+ .+.. .+.+.+.+.|.+.+.
T Consensus 111 ~~~v~~~P~~~lid~~G~i---~~~~-~~~~~l~~~l~~ll~ 148 (150)
T 3fw2_A 111 QYSIYKIPANILLSSDGKI---LAKN-LRGEELKKKIENIVE 148 (150)
T ss_dssp HTTCCSSSEEEEECTTSBE---EEES-CCHHHHHHHHHHHHH
T ss_pred HcCCCccCeEEEECCCCEE---EEcc-CCHHHHHHHHHHHHh
Confidence 6789999999999544433 2332 378888888887664
No 285
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=98.91 E-value=1.7e-08 Score=76.94 Aligned_cols=94 Identities=13% Similarity=0.117 Sum_probs=75.3
Q ss_pred cCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCc-eEEEEEeCCCccc-------------------chhHHHHcCCCCC
Q 023747 36 IDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGK-IMFTAVDIADEDL-------------------AKPFLTLFGLEES 94 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~-v~f~~vd~~~~~~-------------------~~~l~~~~~i~~~ 94 (278)
.+++++|.||++| ++|....|.+.++++++.+. +.|+.|+++.... ...+++.|+|.++
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 106 (152)
T 3gl3_A 27 TGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRLYGVKGM 106 (152)
T ss_dssp TTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHHTTCCSS
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHHHcCCCCC
Confidence 4578999999999 99999999999999999876 9999999886510 0178899999999
Q ss_pred CceEEEEecCCcceeecCCCC--CChHHHHHHHHHHhcC
Q 023747 95 KNTVVTAFDNKAISKFLLESD--LTPSNIEEFCSRLLHG 131 (278)
Q Consensus 95 ~Ptl~~~~~~~~~~~~~~~g~--~~~~~i~~fi~~~~~~ 131 (278)
|++ .+++.++...+.+.|. .+.+++.+++++.+.+
T Consensus 107 -P~~-~lid~~G~i~~~~~g~~~~~~~~l~~~i~~~~~~ 143 (152)
T 3gl3_A 107 -PTS-FLIDRNGKVLLQHVGFRPADKEALEQQILAALGG 143 (152)
T ss_dssp -SEE-EEECTTSBEEEEEESCCTTTHHHHHHHHHHHTC-
T ss_pred -CeE-EEECCCCCEEEEEccCCCcCHHHHHHHHHHHHcc
Confidence 999 6776555555555664 4668999999998754
No 286
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=98.91 E-value=1e-08 Score=78.96 Aligned_cols=94 Identities=14% Similarity=0.128 Sum_probs=76.7
Q ss_pred cCCceEEEEEeCc-cchHH-HHHHHHHHHHHhcCc-eEEEEEeCCCc-------------------------ccchh---
Q 023747 36 IDTLDMVYVFAKA-DDLKS-LLEPLEDIARNFKGK-IMFTAVDIADE-------------------------DLAKP--- 84 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~-~~~~~~~la~~~~~~-v~f~~vd~~~~-------------------------~~~~~--- 84 (278)
.+++++|.||++| ++|.. ..|.+.+++++|+++ +.|+.|+++-. +....
T Consensus 29 ~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 108 (160)
T 3lor_A 29 RGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKFPVAVDMPREGQR 108 (160)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCTTCS
T ss_pred CCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCCHHHHHHHHHHcCCCCcEEECCccccch
Confidence 3578999999999 99999 699999999999875 99999986310 00123
Q ss_pred ---HHHHcCCCCCCceEEEEecCCcceeecCCCCCChHHHHHHHHHHhcC
Q 023747 85 ---FLTLFGLEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHG 131 (278)
Q Consensus 85 ---l~~~~~i~~~~Ptl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~ 131 (278)
+++.|||.++ |++ .+++.++...+.+.|..+.+.+.+.++++++.
T Consensus 109 ~~~~~~~~~v~~~-P~~-~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~ 156 (160)
T 3lor_A 109 IPSTMKKYRLEGT-PSI-ILADRKGRIRQVQFGQVDDFVLGLLLGSLLSE 156 (160)
T ss_dssp SCHHHHHTTCCSS-SEE-EEECTTSBEEEEEESCCCHHHHHHHHHHHHTC
T ss_pred hhhHHHhcccCcc-ceE-EEECCCCcEEEEecCcCCHHHHHHHHHHHHhc
Confidence 9999999999 999 77876555667778999999999999998753
No 287
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=98.90 E-value=2.9e-09 Score=80.61 Aligned_cols=64 Identities=23% Similarity=0.380 Sum_probs=54.2
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-------------------------CC-CCCCC
Q 023747 165 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-------------------------EH-PKLQV 218 (278)
Q Consensus 165 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-------------------------~~-~~~~i 218 (278)
.+++++|.||++||++|+.+.|.+.++++.+.+..++.++.|+++.. ++ ..|++
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 106 (144)
T 1o73_A 27 VGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFGV 106 (144)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHTC
T ss_pred CCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHcCC
Confidence 47899999999999999999999999999998433788888988763 12 25689
Q ss_pred cCCCeEEEEe
Q 023747 219 EEYPTLLFYP 228 (278)
Q Consensus 219 ~~~Ptl~~f~ 228 (278)
..+|+++++.
T Consensus 107 ~~~Pt~~lid 116 (144)
T 1o73_A 107 ESIPTLITIN 116 (144)
T ss_dssp CSSSEEEEEE
T ss_pred CCCCEEEEEE
Confidence 9999999998
No 288
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=98.89 E-value=1e-09 Score=85.60 Aligned_cols=94 Identities=11% Similarity=-0.002 Sum_probs=73.1
Q ss_pred eeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchh-HHHHcCC--CCCCceEEEEecCCcc
Q 023747 32 KVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKP-FLTLFGL--EESKNTVVTAFDNKAI 107 (278)
Q Consensus 32 ~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~-l~~~~~i--~~~~Ptl~~~~~~~~~ 107 (278)
.....+++++|.||++| ++|+.+.|.|.+++..+...+.|+.||++.. .. ++..|++ .++ ||+ .+++.++.
T Consensus 41 ~~~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~~~~~~v~~d~~---~~~~~~~~~~~~~~~-Pt~-~~~d~~G~ 115 (164)
T 1sen_A 41 EAAASGLPLMVIIHKSWCGACKALKPKFAESTEISELSHNFVMVNLEDE---EEPKDEDFSPDGGYI-PRI-LFLDPSGK 115 (164)
T ss_dssp HHHHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHHHTTSEEEEEEGG---GSCSCGGGCTTCSCS-SEE-EEECTTSC
T ss_pred HHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhcCCeEEEEEecCC---chHHHHHhcccCCcC-CeE-EEECCCCC
Confidence 34456789999999999 9999999999998887765678888888877 45 7888998 558 999 77743333
Q ss_pred eeecCCC----------CCChHHHHHHHHHHhc
Q 023747 108 SKFLLES----------DLTPSNIEEFCSRLLH 130 (278)
Q Consensus 108 ~~~~~~g----------~~~~~~i~~fi~~~~~ 130 (278)
....+.| ..+.+++.+++++.+.
T Consensus 116 ~~~~~~G~~~~~~~~~~~~~~~~l~~~l~~~l~ 148 (164)
T 1sen_A 116 VHPEIINENGNPSYKYFYVSAEQVVQGMKEAQE 148 (164)
T ss_dssp BCTTCCCTTSCTTSTTCCCSHHHHHHHHHHHHH
T ss_pred EEEEEeCCCCccchhcccCCHHHHHHHHHHHHH
Confidence 3444455 3788999999998764
No 289
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=98.88 E-value=8.3e-09 Score=78.99 Aligned_cols=87 Identities=9% Similarity=0.004 Sum_probs=74.7
Q ss_pred CceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeC---------------------------CCcccchhHHHHc
Q 023747 38 TLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDI---------------------------ADEDLAKPFLTLF 89 (278)
Q Consensus 38 ~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~---------------------------~~~~~~~~l~~~~ 89 (278)
++++|.||++| ++|+...|.+.++++++ .+.|+.|++ +.. ..+++.|
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l~~l~~~~--~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~~ 105 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGLHRVAEET--GVPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRP---HEVAARF 105 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHHHHHHHHH--CCCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCH---HHHHTTS
T ss_pred CeEEEEEEcccChhHHHHHHHHHHHHHHc--CCeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccch---HHHHHHh
Confidence 78999999999 99999999999999999 588999998 233 7899999
Q ss_pred CCCCCCceEEEEecCCcceeecCCCCCChHHHHHHHHHHhcC
Q 023747 90 GLEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHG 131 (278)
Q Consensus 90 ~i~~~~Ptl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~ 131 (278)
++.++ |++ .+++.++...+.+.|..+.+++.+++++...+
T Consensus 106 ~v~~~-P~~-~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~ 145 (154)
T 3ia1_A 106 KVLGQ-PWT-FVVDREGKVVALFAGRAGREALLDALLLAGAD 145 (154)
T ss_dssp SBCSS-CEE-EEECTTSEEEEEEESBCCHHHHHHHHHHTTCC
T ss_pred CCCcc-cEE-EEECCCCCEEEEEcCCCCHHHHHHHHHhccCc
Confidence 99999 998 67765555566678889999999999997654
No 290
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=98.88 E-value=1.2e-08 Score=79.10 Aligned_cols=90 Identities=10% Similarity=0.199 Sum_probs=72.6
Q ss_pred cCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCC------------------Cccc---------------
Q 023747 36 IDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIA------------------DEDL--------------- 81 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~------------------~~~~--------------- 81 (278)
.+++++|.||++| ++|+...|.+.+++++++ .+.|+.|+++ ....
T Consensus 36 ~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~-~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (165)
T 3ha9_A 36 GGDVVILWFMAAWCPSCVYMADLLDRLTEKYR-EISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDPSWI 114 (165)
T ss_dssp CSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT-TEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCTTSE
T ss_pred CCCEEEEEEECCCCcchhhhHHHHHHHHHHcC-CcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCCCCee
Confidence 4578999999999 999999999999999999 6999999987 2200
Q ss_pred ----chhHHHHcCCCCCCceEEEEecCCcceeecCCCCC-ChHHHHHHHHHHhc
Q 023747 82 ----AKPFLTLFGLEESKNTVVTAFDNKAISKFLLESDL-TPSNIEEFCSRLLH 130 (278)
Q Consensus 82 ----~~~l~~~~~i~~~~Ptl~~~~~~~~~~~~~~~g~~-~~~~i~~fi~~~~~ 130 (278)
...+++.|+|.++ |++ .+++.++...+ .|.. +.+.+.+++++++.
T Consensus 115 ~~~d~~~~~~~~~v~~~-P~~-~lid~~G~i~~--~g~~~~~~~l~~~l~~l~~ 164 (165)
T 3ha9_A 115 MVMDDGSLVEKFNVRSI-DYI-VIMDKSSNVLY--AGTTPSLGELESVIKSVQG 164 (165)
T ss_dssp EEECCSHHHHHTTCCSS-SEE-EEEETTCCEEE--EEESCCHHHHHHHHHHC--
T ss_pred EEeChHHHHHHhCCCCc-eEE-EEEcCCCcEEE--eCCCCCHHHHHHHHHHHhc
Confidence 0278999999999 999 77765544455 6777 99999999998764
No 291
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=98.88 E-value=4.4e-09 Score=80.91 Aligned_cols=98 Identities=10% Similarity=0.207 Sum_probs=74.3
Q ss_pred cchHHHh---hcCCCcEEEEEECCCChhHHHHHHHH---HHHHHHhcCCCceEEEEEeCCCCC---C-CCCCCcCCCeEE
Q 023747 156 KTFDDLV---LNSHKDVLLEVYTPWCVTCETTSKQI---EKLAKHFKGLDNLVIAKIDASANE---H-PKLQVEEYPTLL 225 (278)
Q Consensus 156 ~~~~~~i---~~~~~~~~v~f~~~~c~~c~~~~~~~---~~~a~~~~~~~~~~~~~vd~~~~~---~-~~~~i~~~Ptl~ 225 (278)
.+|++.+ ...+|+++|.||++||.+|+.|.... .+++..++. ++++..+|.+..+ + ..|++.++|+++
T Consensus 29 ~~~~~Al~~Ak~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~--~fv~v~~d~~~~~~~~l~~~y~v~~~P~~~ 106 (153)
T 2dlx_A 29 GSFETAKECGQMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIRE--HFIFWQVYHDSEEGQRYIQFYKLGDFPYVS 106 (153)
T ss_dssp SCHHHHHHHHHHHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHH--TEEEEEEESSSHHHHHHHHHHTCCSSSEEE
T ss_pred cCHHHHHHHHHHcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHc--CeEEEEEecCCHhHHHHHHHcCCCCCCEEE
Confidence 4566554 34589999999999999999997654 466666654 6999999986542 2 478999999999
Q ss_pred EEeC--CCccCceEecCCCCHHHHHHHHHHHhccc
Q 023747 226 FYPA--GDKANPIKVSARSSSKNIAAFIKEQLKEK 258 (278)
Q Consensus 226 ~f~~--g~~~~~~~~~g~~~~~~l~~~i~~~~~~~ 258 (278)
++.. |+.+. .+.| .+.+.++++|++.+...
T Consensus 107 fld~~~G~~l~--~~~g-~~~~~fl~~L~~~l~~~ 138 (153)
T 2dlx_A 107 ILDPRTGQKLV--EWHQ-LDVSSFLDQVTGFLGEH 138 (153)
T ss_dssp EECTTTCCCCE--EESS-CCHHHHHHHHHHHHHHT
T ss_pred EEeCCCCcEee--ecCC-CCHHHHHHHHHHHHHhc
Confidence 9954 44443 4555 89999999999887654
No 292
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=98.88 E-value=5.2e-10 Score=94.79 Aligned_cols=70 Identities=14% Similarity=0.246 Sum_probs=55.5
Q ss_pred EEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCC------C-CC-CCCCCcCCCeEEEEeCCCccCceEecC
Q 023747 169 VLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA------N-EH-PKLQVEEYPTLLFYPAGDKANPIKVSA 240 (278)
Q Consensus 169 ~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~------~-~~-~~~~i~~~Ptl~~f~~g~~~~~~~~~g 240 (278)
.+|+||||||++|+.+.|.|++++++++ .+|++. + ++ .+++|+++||+++ +|+ .|.|
T Consensus 200 ~vV~F~A~WC~~Ck~l~p~le~lA~~l~--------~Vd~d~~d~~~~~~~la~~~gI~~vPT~~i--~G~-----~~~G 264 (291)
T 3kp9_A 200 GGTMYGAYWCPHCQDQKELFGAAFDQVP--------YVECSPNGPGTPQAQECTEAGITSYPTWII--NGR-----TYTG 264 (291)
T ss_dssp TCEEEECTTCHHHHHHHHHHGGGGGGSC--------EEESCSSCSSSCCCHHHHTTTCCSTTEEEE--TTE-----EEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHcC--------EEEEeecCchhhHHHHHHHcCCcccCeEEE--CCE-----EecC
Confidence 4799999999999999999999986652 345441 3 34 4899999999655 663 4899
Q ss_pred CCCHHHHHHHHHH
Q 023747 241 RSSSKNIAAFIKE 253 (278)
Q Consensus 241 ~~~~~~l~~~i~~ 253 (278)
..+.++|.+|+.-
T Consensus 265 ~~~~~~L~~~l~~ 277 (291)
T 3kp9_A 265 VRSLEALAVASGY 277 (291)
T ss_dssp CCCHHHHHHHTCC
T ss_pred CCCHHHHHHHHCC
Confidence 9999999999853
No 293
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=98.87 E-value=5.6e-09 Score=82.94 Aligned_cols=89 Identities=15% Similarity=0.275 Sum_probs=70.0
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCC-----------------------------C-CC-
Q 023747 165 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA-----------------------------N-EH- 213 (278)
Q Consensus 165 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~-----------------------------~-~~- 213 (278)
.+++++|.||++||++|....+.+.+++..+.+ ++.+..|+++. + ++
T Consensus 32 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~--~~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~ 109 (188)
T 2cvb_A 32 HEPLLAVVFMCNHCPYVKGSIGELVALAERYRG--KVAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDETQEVA 109 (188)
T ss_dssp CSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTT--TEEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSSHHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhhc--CeEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCcchHH
Confidence 368999999999999999999999999999987 38999998842 2 23
Q ss_pred CCCCCcCCCeEEEEeCCCccCceEecCC----------CCHHHHHHHHHHHhccc
Q 023747 214 PKLQVEEYPTLLFYPAGDKANPIKVSAR----------SSSKNIAAFIKEQLKEK 258 (278)
Q Consensus 214 ~~~~i~~~Ptl~~f~~g~~~~~~~~~g~----------~~~~~l~~~i~~~~~~~ 258 (278)
..|++..+|+++++..++.+ .+.|. .+.+.|.+.|++.+..+
T Consensus 110 ~~~~v~~~P~~~lid~~G~i---~~~g~~~~~~~~~g~~~~~~l~~~i~~ll~~~ 161 (188)
T 2cvb_A 110 KAYRALRTPEVFLFDERRLL---RYHGRVNDNPKDPSKVQSHDLEAAIEALLRGE 161 (188)
T ss_dssp HHTTCCEESEEEEECTTCBE---EEEECSSSCTTCGGGCCCCHHHHHHHHHHTTC
T ss_pred HHcCCCCCCeEEEECCCCcE---EEEEecCCccccccccCHHHHHHHHHHHHcCC
Confidence 36789999999999544433 33333 36789999999888644
No 294
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=98.84 E-value=2e-08 Score=77.11 Aligned_cols=94 Identities=10% Similarity=0.066 Sum_probs=76.2
Q ss_pred cCCceEEEEEeCc-cchHHH-HHHHHHHHHHhcC-ceEEEEEeCCCc-------------------------ccch----
Q 023747 36 IDTLDMVYVFAKA-DDLKSL-LEPLEDIARNFKG-KIMFTAVDIADE-------------------------DLAK---- 83 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~-~~~~~~la~~~~~-~v~f~~vd~~~~-------------------------~~~~---- 83 (278)
.+++++|.||++| ++|... .|.+.+++++|++ .+.|+.|+++.. +...
T Consensus 27 ~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 106 (158)
T 3eyt_A 27 RGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQPGDGAM 106 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCSSSS
T ss_pred CCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEEcCccchhh
Confidence 3578999999999 999995 9999999999985 499999886410 0001
Q ss_pred -hHHHHcCCCCCCceEEEEecCCcceeecCCCCCChHHHHHHHHHHhcC
Q 023747 84 -PFLTLFGLEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHG 131 (278)
Q Consensus 84 -~l~~~~~i~~~~Ptl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~ 131 (278)
.+++.|||.++ |++ .+++.++...+.+.|..+.+.+.++++++++.
T Consensus 107 ~~~~~~~~v~~~-P~~-~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~ 153 (158)
T 3eyt_A 107 PRTMAAYQMRGT-PSL-LLIDKAGDLRAHHFGDVSELLLGAEIATLLGE 153 (158)
T ss_dssp CHHHHHTTCCSS-SEE-EEECTTSEEEEEEESCCCHHHHHHHHHHHHTS
T ss_pred HHHHHHcCCCCC-CEE-EEECCCCCEEEEEeCCCCHHHHHHHHHHHhcc
Confidence 58999999999 999 77776655666778899999999999998853
No 295
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=98.83 E-value=3.6e-09 Score=77.16 Aligned_cols=86 Identities=10% Similarity=-0.052 Sum_probs=66.2
Q ss_pred CceEEEEEeCc-cchHHHHHHHHHHHHHhcCc-----eEEEEEeCCCcccchhHHHHcCCCCCCceEEEEecCCcceeec
Q 023747 38 TLDMVYVFAKA-DDLKSLLEPLEDIARNFKGK-----IMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFDNKAISKFL 111 (278)
Q Consensus 38 ~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~-----v~f~~vd~~~~~~~~~l~~~~~i~~~~Ptl~~~~~~~~~~~~~ 111 (278)
..++|+||++| ++|+.+.+. ++..+... +.+..||.+.+.. ..++.+++|.+. ||| .+|+.|. ....
T Consensus 19 ~~~LV~F~A~wC~~Ck~~~~~---i~~~~~~~a~~~~~~l~~vdv~~~~~-~~la~~~~V~g~-PT~-i~f~~G~-ev~R 91 (116)
T 3dml_A 19 ELRLLMFEQPGCLYCARWDAE---IAPQYPLTDEGRAAPVQRLQMRDPLP-PGLELARPVTFT-PTF-VLMAGDV-ESGR 91 (116)
T ss_dssp CEEEEEEECTTCHHHHHHHHH---TTTTGGGSHHHHHSCEEEEETTSCCC-TTCBCSSCCCSS-SEE-EEEETTE-EEEE
T ss_pred CCEEEEEECCCCHHHHHHHHH---HHhhHHHhhhcccceEEEEECCCCCc-hhHHHHCCCCCC-CEE-EEEECCE-EEee
Confidence 56899999999 999999864 44444433 7788888887532 578899999999 999 5555443 3345
Q ss_pred CCCCCChHHHHHHHHHHhc
Q 023747 112 LESDLTPSNIEEFCSRLLH 130 (278)
Q Consensus 112 ~~g~~~~~~i~~fi~~~~~ 130 (278)
+.|....+.+.+++++.+.
T Consensus 92 i~G~~~~~~f~~~L~~~l~ 110 (116)
T 3dml_A 92 LEGYPGEDFFWPMLARLIG 110 (116)
T ss_dssp EECCCCHHHHHHHHHHHHH
T ss_pred ecCCCCHHHHHHHHHHHHh
Confidence 6899999999999998764
No 296
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=98.82 E-value=1.4e-08 Score=82.89 Aligned_cols=90 Identities=16% Similarity=0.286 Sum_probs=70.2
Q ss_pred CC-cEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCC-----------------------------C-CC-
Q 023747 166 HK-DVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA-----------------------------N-EH- 213 (278)
Q Consensus 166 ~~-~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~-----------------------------~-~~- 213 (278)
++ .++|.||++||++|....+.+.++++.+++. ++.++.|+++. . .+
T Consensus 58 gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~-~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~~~~l~D~~~~~~ 136 (218)
T 3u5r_E 58 DSPALLVAFISNRCPFVVLIREALAKFAGDYAGQ-GLAVVAINSNDAQAFPEETLERVGAEVKAYGYGFPYLKDASQSVA 136 (218)
T ss_dssp TCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTT-TEEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECTTCHHH
T ss_pred CCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhC-CcEEEEEECCcccccccCCHHHHHHHHHHhCCCccEEECCccHHH
Confidence 56 4999999999999999999999999999864 48999999842 2 23
Q ss_pred CCCCCcCCCeEEEEeCCCccCceEecC-----------CCCHHHHHHHHHHHhcccC
Q 023747 214 PKLQVEEYPTLLFYPAGDKANPIKVSA-----------RSSSKNIAAFIKEQLKEKD 259 (278)
Q Consensus 214 ~~~~i~~~Ptl~~f~~g~~~~~~~~~g-----------~~~~~~l~~~i~~~~~~~~ 259 (278)
..|++..+|+++++..++.+ .|.| ..+.+.|.+.|.+.+..+.
T Consensus 137 ~~~~v~~~P~~~liD~~G~i---~~~g~~d~~~~~~~~~~~~~~l~~~i~~ll~~~~ 190 (218)
T 3u5r_E 137 KAYGAACTPDFFLYDRERRL---VYHGQFDDARPGNGKDVTGADLRAAVDAVLKGKD 190 (218)
T ss_dssp HHHTCCEESEEEEECTTCBE---EEEECSSSCCTTSCCCCCCHHHHHHHHHHHTTCC
T ss_pred HHcCCCCCCeEEEECCCCcE---EEeccccccccccccccCHHHHHHHHHHHHcCCC
Confidence 36789999999999544433 4543 3457899999998886443
No 297
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=98.81 E-value=3e-08 Score=78.33 Aligned_cols=90 Identities=10% Similarity=0.157 Sum_probs=73.3
Q ss_pred cCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCc-e------EEEEEeCCC-cccchhHHHHc-----------------
Q 023747 36 IDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGK-I------MFTAVDIAD-EDLAKPFLTLF----------------- 89 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~-v------~f~~vd~~~-~~~~~~l~~~~----------------- 89 (278)
.+++++|.||++| ++|+...|.+.+++++|++. + .|+.|+++. . ...+++|
T Consensus 58 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~---~~~~~~~~~~~~~~~~~~~d~~~~ 134 (183)
T 3lwa_A 58 ENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYS---RDIAQDFVTDNGLDYPSIYDPPFM 134 (183)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCC---HHHHHHHHHHTTCCSCEEECTTCG
T ss_pred CCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCC---HHHHHHHHHHcCCCccEEECCcch
Confidence 4578999999999 99999999999999999865 7 999999987 4 4555555
Q ss_pred --------CCCCCCceEEEEecCCcceeecCCCCCChHHHHHHHHHHhc
Q 023747 90 --------GLEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLH 130 (278)
Q Consensus 90 --------~i~~~~Ptl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 130 (278)
++.++ |++ .+++..+...+.+.|..+.++|.++++++++
T Consensus 135 ~~~~~~~~~v~~~-P~~-~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 181 (183)
T 3lwa_A 135 TAASLGGVPASVI-PTT-IVLDKQHRPAAVFLREVTSKDVLDVALPLVD 181 (183)
T ss_dssp GGGGTTTCCTTCC-SEE-EEECTTSCEEEEECSCCCHHHHHHHHHHHHH
T ss_pred HHHHhccCCCCCC-CeE-EEECCCCcEEEEEcCCCCHHHHHHHHHHHHh
Confidence 67888 988 6666555566667888999999999998764
No 298
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=98.81 E-value=1.1e-09 Score=84.80 Aligned_cols=93 Identities=10% Similarity=-0.005 Sum_probs=72.6
Q ss_pred cCCceEEEEEeCc-cchHHHHHHHHHHHHHhcC-ceEEEEEeCCC------------------c-------ccchhHHHH
Q 023747 36 IDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKG-KIMFTAVDIAD------------------E-------DLAKPFLTL 88 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~-~v~f~~vd~~~------------------~-------~~~~~l~~~ 88 (278)
.+++++|.||++| ++|+...|.+.+++++|++ .+.|+.|+++. . +....+++.
T Consensus 37 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 116 (164)
T 2h30_A 37 KDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKWYAGLNYPKLPVVTDNGGTIAQN 116 (164)
T ss_dssp TTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHHHTTSCCTTSCEEECTTCHHHHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHHHHHHHHHhCCCCcceEEEcCchHHHHH
Confidence 4578999999999 9999999999999999753 36666665421 0 002689999
Q ss_pred cCCCCCCceEEEEecCCcceeecCCCCCChHHHHHHHHHHhc
Q 023747 89 FGLEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLH 130 (278)
Q Consensus 89 ~~i~~~~Ptl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 130 (278)
|+|.++ |++ .+++.++...+.+.|..+.+++.+++++.+.
T Consensus 117 ~~v~~~-P~~-~lid~~G~i~~~~~g~~~~~~l~~~i~~~~~ 156 (164)
T 2h30_A 117 LNISVY-PSW-ALIGKDGDVQRIVKGSINEAQALALIRNPNA 156 (164)
T ss_dssp TTCCSS-SEE-EEECTTSCEEEEEESCCCHHHHHHHHHCTTC
T ss_pred cCCCcc-ceE-EEECCCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 999999 999 7776554556666788999999999998764
No 299
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=98.79 E-value=1.2e-08 Score=77.18 Aligned_cols=83 Identities=10% Similarity=0.155 Sum_probs=63.6
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCC---------------------------C-CCC
Q 023747 165 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASANE---------------------------H-PKL 216 (278)
Q Consensus 165 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~~---------------------------~-~~~ 216 (278)
.+++++|.||++||++|....|.+.++.+.++.. ++.+..|+.+... + ..|
T Consensus 31 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~-~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 109 (143)
T 4fo5_A 31 LGRYTLLNFWAAYDAESRARNVQLANEVNKFGPD-KIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELYKKY 109 (143)
T ss_dssp SCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTT-TEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHHHHT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcC-CEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchHHHHHc
Confidence 3689999999999999999999999999999764 6889888887431 1 246
Q ss_pred CCcCCCeEEEEeCCCccCceEecCCCCHHHHHHHHH
Q 023747 217 QVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIK 252 (278)
Q Consensus 217 ~i~~~Ptl~~f~~g~~~~~~~~~g~~~~~~l~~~i~ 252 (278)
++..+|+.+++...+++ .+. ..+.+++.++|+
T Consensus 110 ~v~~~P~~~lid~~G~i---~~~-~~~~~~l~~~l~ 141 (143)
T 4fo5_A 110 DLRKGFKNFLINDEGVI---IAA-NVTPEKLTEILK 141 (143)
T ss_dssp TGGGCCCEEEECTTSBE---EEE-SCCHHHHHHHHT
T ss_pred CCCCCCcEEEECCCCEE---EEc-cCCHHHHHHHHH
Confidence 88999999999644433 333 245677777664
No 300
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=98.79 E-value=3.4e-08 Score=78.81 Aligned_cols=95 Identities=17% Similarity=0.232 Sum_probs=75.9
Q ss_pred cCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCc-eEEEEEeCCCc--------------------------ccchhHHH
Q 023747 36 IDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGK-IMFTAVDIADE--------------------------DLAKPFLT 87 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~-v~f~~vd~~~~--------------------------~~~~~l~~ 87 (278)
++.+++|.||++| ++|+...|.+.+++++|.++ +.|+.|+++.. +....+++
T Consensus 45 gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 124 (196)
T 2ywi_A 45 SDAATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDETQEVAK 124 (196)
T ss_dssp CSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSCHHHH
T ss_pred CCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECCchHHHH
Confidence 3345999999999 99999999999999999865 99999998521 11157999
Q ss_pred HcCCCCCCceEEEEecCCcceeec---------CCCCCChHHHHHHHHHHhcCc
Q 023747 88 LFGLEESKNTVVTAFDNKAISKFL---------LESDLTPSNIEEFCSRLLHGT 132 (278)
Q Consensus 88 ~~~i~~~~Ptl~~~~~~~~~~~~~---------~~g~~~~~~i~~fi~~~~~~~ 132 (278)
.|+|.+. |++ .+++.++...+. +.|..+.++|.+.+++++.+.
T Consensus 125 ~~~v~~~-P~~-~lid~~G~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~ll~~~ 176 (196)
T 2ywi_A 125 AYDAACT-PDF-YIFDRDLKCVYRGQLDDSRPNNGIPVTGESIRAALDALLEGR 176 (196)
T ss_dssp HHTCCEE-SEE-EEEETTCBEEEEECSSSCCTTTCCCCCCHHHHHHHHHHHHTC
T ss_pred HhCCCCC-CeE-EEEcCCCeEEEccccCcccccccCccCHHHHHHHHHHHHcCC
Confidence 9999999 999 777655444554 457789999999999998764
No 301
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=98.78 E-value=3.4e-08 Score=76.25 Aligned_cols=90 Identities=14% Similarity=0.211 Sum_probs=70.6
Q ss_pred CCCcEEEEEECCCChh-HHHHHHHHHHHHHHhcCC---CceEEEEEeCCCC-C---------------------------
Q 023747 165 SHKDVLLEVYTPWCVT-CETTSKQIEKLAKHFKGL---DNLVIAKIDASAN-E--------------------------- 212 (278)
Q Consensus 165 ~~~~~~v~f~~~~c~~-c~~~~~~~~~~a~~~~~~---~~~~~~~vd~~~~-~--------------------------- 212 (278)
.+++++|.||++||++ |....+.+.++...++.. .++.+..|+++.+ +
T Consensus 22 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~ 101 (164)
T 2ggt_A 22 LGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTREEVD 101 (164)
T ss_dssp TTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHHTTCSSCEEEECCHHHHH
T ss_pred CCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 3789999999999998 999999999999999641 2688888888753 1
Q ss_pred -C-CCCCCcCCC---------------eEEEE-eCCCccCceEecCCCCHHHHHHHHHHHhc
Q 023747 213 -H-PKLQVEEYP---------------TLLFY-PAGDKANPIKVSARSSSKNIAAFIKEQLK 256 (278)
Q Consensus 213 -~-~~~~i~~~P---------------tl~~f-~~g~~~~~~~~~g~~~~~~l~~~i~~~~~ 256 (278)
+ ..|++...| +.+++ ++|+.. ..+.|..+.+.|.+.|.+.+.
T Consensus 102 ~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~--~~~~g~~~~~~l~~~l~~ll~ 161 (164)
T 2ggt_A 102 QVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFL--DYFGQNKRKGEIAASIATHMR 161 (164)
T ss_dssp HHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEE--EEEETTCCHHHHHHHHHHHHG
T ss_pred HHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEE--EEeCCCCCHHHHHHHHHHHHH
Confidence 2 256788888 66766 455543 267888999999999988775
No 302
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=98.26 E-value=7e-10 Score=85.68 Aligned_cols=89 Identities=17% Similarity=0.260 Sum_probs=64.0
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHH-HHHHhcCCCceEEEEEeCCCC-C-CCCCC------------------------
Q 023747 165 SHKDVLLEVYTPWCVTCETTSKQIEK-LAKHFKGLDNLVIAKIDASAN-E-HPKLQ------------------------ 217 (278)
Q Consensus 165 ~~~~~~v~f~~~~c~~c~~~~~~~~~-~a~~~~~~~~~~~~~vd~~~~-~-~~~~~------------------------ 217 (278)
.+++++|.||++||++|....+.+.+ +...+....++.++.|+++.. + ..++.
T Consensus 32 ~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 111 (159)
T 2ls5_A 32 RGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEPLEKVLAFAKSTGVTYPLGLDPGADIFAKYALR 111 (159)
Confidence 36899999999999999999999998 888887222688888887765 2 23332
Q ss_pred CcCCCeEEEE-eCCCccCceEecCCCCHHHHHHHHHHHhc
Q 023747 218 VEEYPTLLFY-PAGDKANPIKVSARSSSKNIAAFIKEQLK 256 (278)
Q Consensus 218 i~~~Ptl~~f-~~g~~~~~~~~~g~~~~~~l~~~i~~~~~ 256 (278)
+.++|+++++ ++|+... .+.| .+.+++.++|++..+
T Consensus 112 ~~~~P~~~lid~~G~i~~--~~~g-~~~~~l~~~l~~l~~ 148 (159)
T 2ls5_A 112 DAGITRNVLIDREGKIVK--LTRL-YNEEEFASLVQQINE 148 (159)
Confidence 5679999999 5665432 4455 455667666655443
No 303
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=98.76 E-value=9.7e-09 Score=80.06 Aligned_cols=88 Identities=14% Similarity=0.179 Sum_probs=68.0
Q ss_pred CCCcEEEEEECCCChh-HHHHHHHHHHHHHHhcCC--CceEEEEEeCCCC-CC---------------------------
Q 023747 165 SHKDVLLEVYTPWCVT-CETTSKQIEKLAKHFKGL--DNLVIAKIDASAN-EH--------------------------- 213 (278)
Q Consensus 165 ~~~~~~v~f~~~~c~~-c~~~~~~~~~~a~~~~~~--~~~~~~~vd~~~~-~~--------------------------- 213 (278)
.+++++|.||++||++ |....+.+.++...+... .++.++.|+++.+ +.
T Consensus 34 ~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~d~~~~~~~ 113 (172)
T 2k6v_A 34 QDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADRYAKAFHPSFLGLSGSPEAVRE 113 (172)
T ss_dssp TTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEEEECCCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcEEEeCCHHHHHH
Confidence 3789999999999997 999999999999998742 1589999998753 11
Q ss_pred -----------------CCCCCcCCCeEEEEeCCCccCceEecCCC--CHHHHHHHHHHH
Q 023747 214 -----------------PKLQVEEYPTLLFYPAGDKANPIKVSARS--SSKNIAAFIKEQ 254 (278)
Q Consensus 214 -----------------~~~~i~~~Ptl~~f~~g~~~~~~~~~g~~--~~~~l~~~i~~~ 254 (278)
..|++..+|+++++. ++++ ...+.|.. +.+.|.++|++.
T Consensus 114 ~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid-~G~i-~~~~~g~~~~~~~~l~~~l~~l 171 (172)
T 2k6v_A 114 AAQTFGVFYQKSQYRGPGEYLVDHTATTFVVK-EGRL-VLLYSPDKAEATDRVVADLQAL 171 (172)
T ss_dssp HHHHHTCCEEEEEEEETTEEEEEECCCEEEEE-TTEE-EEEECHHHHTCHHHHHHHHHHC
T ss_pred HHHhcCeEEEeccCCCCCCceEecCCEEEEEE-CCEE-EEEECCCCCCCHHHHHHHHHHh
Confidence 013356789999999 5544 23677776 889999998764
No 304
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=98.76 E-value=5.5e-08 Score=74.27 Aligned_cols=94 Identities=12% Similarity=0.143 Sum_probs=73.0
Q ss_pred cCCceEEEEEeCc-cchHHHHHHHHHHHHHhcC-ceEEEEEeCCCcc--------------------cchhHHHHcCCCC
Q 023747 36 IDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKG-KIMFTAVDIADED--------------------LAKPFLTLFGLEE 93 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~-~v~f~~vd~~~~~--------------------~~~~l~~~~~i~~ 93 (278)
.+++++|.||++| ++|+...|.+.++++++.+ .+.|+.|+++..+ ....+++.|++.+
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 106 (154)
T 3kcm_A 27 KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLYGTTG 106 (154)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHHHHTCCS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHHHhCCCC
Confidence 5578999999999 9999999999999999987 5899999888641 0135889999999
Q ss_pred CCceEEEEecCCcceeecCCCCC--ChHHHHHHHHHHhcC
Q 023747 94 SKNTVVTAFDNKAISKFLLESDL--TPSNIEEFCSRLLHG 131 (278)
Q Consensus 94 ~~Ptl~~~~~~~~~~~~~~~g~~--~~~~i~~fi~~~~~~ 131 (278)
+ |++ .+++.++...+.+.|.. +.+++.++++++..+
T Consensus 107 ~-P~~-~lid~~G~i~~~~~g~~~~~~~~l~~~l~~l~~~ 144 (154)
T 3kcm_A 107 V-PET-FVIDRHGVILKKVVGAMEWDHPEVIAFLNNELSK 144 (154)
T ss_dssp B-CEE-EEECTTSBEEEEEESCCCTTSHHHHHHHHTC---
T ss_pred C-CeE-EEECCCCcEEEEEcCCCccccHHHHHHHHHHHHH
Confidence 9 988 66655545555556664 778999999887543
No 305
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=98.76 E-value=2.9e-08 Score=77.57 Aligned_cols=88 Identities=20% Similarity=0.200 Sum_probs=67.0
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCC--------C-CC---C------------------
Q 023747 165 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA--------N-EH---P------------------ 214 (278)
Q Consensus 165 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~--------~-~~---~------------------ 214 (278)
.+++++|.||++||++|. ..|.+.++..++.+. ++.+..|+++. . .+ .
T Consensus 31 ~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~-~v~vv~vs~d~~~~~~~d~~~~~~~~~~~~~~~~~p~~~d~d~~~ 108 (171)
T 3cmi_A 31 KGKVVLIVNVASKCGFTP-QYKELEALYKRYKDE-GFTIIGFPCNQFGHQEPGSDEEIAQFCQLNYGVTFPIMKKIDVNG 108 (171)
T ss_dssp TTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGG-TEEEEEEEECSCC------------------CCCSCBBCCCBSSS
T ss_pred CCCEEEEEEEecCCCcch-hHHHHHHHHHHhccC-CeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCceEEeeccCCC
Confidence 478999999999999999 999999999999863 48888887630 0 00 1
Q ss_pred -------------CCCCcCCC------eEEEE-eCCCccCceEecCCCCHHHHHHHHHHHhc
Q 023747 215 -------------KLQVEEYP------TLLFY-PAGDKANPIKVSARSSSKNIAAFIKEQLK 256 (278)
Q Consensus 215 -------------~~~i~~~P------tl~~f-~~g~~~~~~~~~g~~~~~~l~~~i~~~~~ 256 (278)
.|++..+| +.+++ ++|+.. .++.|..+.+.|.+.|.+.+.
T Consensus 109 ~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i~--~~~~g~~~~~~l~~~i~~ll~ 168 (171)
T 3cmi_A 109 GNEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKVY--ERYSSLTKPSSLSETIEELLK 168 (171)
T ss_dssp TTBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCEE--EEECTTSCGGGGHHHHHHHHT
T ss_pred ccchHHHHHHHhccCCcCCCCcccccceEEEECCCCCEE--EEeCCCCCHHHHHHHHHHHHH
Confidence 24677889 77777 555543 367888899999999988875
No 306
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=98.76 E-value=3.9e-08 Score=76.53 Aligned_cols=90 Identities=12% Similarity=0.197 Sum_probs=70.1
Q ss_pred CCcEEEEEECCCChh-HHHHHHHHHHHHHHhcC---CCceEEEEEeCCCC-C----------------------------
Q 023747 166 HKDVLLEVYTPWCVT-CETTSKQIEKLAKHFKG---LDNLVIAKIDASAN-E---------------------------- 212 (278)
Q Consensus 166 ~~~~~v~f~~~~c~~-c~~~~~~~~~~a~~~~~---~~~~~~~~vd~~~~-~---------------------------- 212 (278)
+++++|.||++||++ |....+.+.++...+.. ..++.++.|+++.+ +
T Consensus 26 gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 105 (171)
T 2rli_A 26 GQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQDFHPRLLGLTGSTKQVAQ 105 (171)
T ss_dssp TSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHHHTTCTTCCEEECCHHHHHH
T ss_pred CCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHHH
Confidence 689999999999998 99999999999999953 12689999988742 1
Q ss_pred C-CCCCCcCCC---------------eEEEE-eCCCccCceEecCCCCHHHHHHHHHHHhcc
Q 023747 213 H-PKLQVEEYP---------------TLLFY-PAGDKANPIKVSARSSSKNIAAFIKEQLKE 257 (278)
Q Consensus 213 ~-~~~~i~~~P---------------tl~~f-~~g~~~~~~~~~g~~~~~~l~~~i~~~~~~ 257 (278)
+ ..|++...| +++++ ++|+.. ..+.|..+.+.|.+.|.+.+..
T Consensus 106 ~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~--~~~~g~~~~~~l~~~l~~ll~~ 165 (171)
T 2rli_A 106 ASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFT--DYYGRSRSAEQISDSVRRHMAA 165 (171)
T ss_dssp HHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEE--EEEESSCCHHHHHHHHHHHHHH
T ss_pred HHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEE--EEECCCCCHHHHHHHHHHHHHH
Confidence 1 246777677 77777 455543 2678889999999999988754
No 307
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=98.75 E-value=1.4e-07 Score=71.83 Aligned_cols=89 Identities=10% Similarity=0.113 Sum_probs=71.7
Q ss_pred cCCceEEEEEeCc-cc--hHHHHHHHHHHHHHh-cCc-eEEEEEeCCCccc----------------------chhHHHH
Q 023747 36 IDTLDMVYVFAKA-DD--LKSLLEPLEDIARNF-KGK-IMFTAVDIADEDL----------------------AKPFLTL 88 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~--c~~~~~~~~~la~~~-~~~-v~f~~vd~~~~~~----------------------~~~l~~~ 88 (278)
.+++++|.||++| ++ |....|.+.+++++| +++ +.|+.|+.+.... ...+++.
T Consensus 32 ~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 111 (150)
T 3fw2_A 32 KQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVAKQ 111 (150)
T ss_dssp TTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHH
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHHHH
Confidence 4578999999999 99 999999999999999 665 9999999886520 1379999
Q ss_pred cCCCCCCceEEEEecCCcceeecCCCCCChHHHHHHHHHHh
Q 023747 89 FGLEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLL 129 (278)
Q Consensus 89 ~~i~~~~Ptl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 129 (278)
|||.++ |++ .+++..+...+.+ .+.+++.+.+++++
T Consensus 112 ~~v~~~-P~~-~lid~~G~i~~~~---~~~~~l~~~l~~ll 147 (150)
T 3fw2_A 112 YSIYKI-PAN-ILLSSDGKILAKN---LRGEELKKKIENIV 147 (150)
T ss_dssp TTCCSS-SEE-EEECTTSBEEEES---CCHHHHHHHHHHHH
T ss_pred cCCCcc-CeE-EEECCCCEEEEcc---CCHHHHHHHHHHHH
Confidence 999999 999 7776554444433 38888888888775
No 308
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.75 E-value=2.5e-08 Score=76.33 Aligned_cols=91 Identities=12% Similarity=0.173 Sum_probs=71.9
Q ss_pred cCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCc--------------------ccchhHHHHcCCCCC
Q 023747 36 IDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADE--------------------DLAKPFLTLFGLEES 94 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~--------------------~~~~~l~~~~~i~~~ 94 (278)
.+++++|.||++| ++|+...|.+.+++++ +.+.|+.|+++.. +....+++.|++.++
T Consensus 41 ~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~--~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 118 (156)
T 1kng_A 41 KGKVSLVNVWASWCVPCHDEAPLLTELGKD--KRFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASIEWGVYGV 118 (156)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHTTC--TTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTTCCSS
T ss_pred CCCEEEEEEEcccCHhHHHHHHHHHHHHhc--CCeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHHHhcCcCcc
Confidence 3678999999999 9999999999999887 5688888886432 111578999999999
Q ss_pred CceEEEEecCCcceeecCCCCCChHHHHHHHHHHhc
Q 023747 95 KNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLH 130 (278)
Q Consensus 95 ~Ptl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 130 (278)
|++ .+++.++...+.+.|..+.+.+.+++++.+.
T Consensus 119 -P~~-~~id~~G~i~~~~~g~~~~~~l~~~l~~~l~ 152 (156)
T 1kng_A 119 -PET-FVVGREGTIVYKLVGPITPDNLRSVLLPQME 152 (156)
T ss_dssp -CEE-EEECTTSBEEEEEESCCCHHHHHHTHHHHHH
T ss_pred -CeE-EEEcCCCCEEEEEeCCCCHHHHHHHHHHHHH
Confidence 987 5665444455666888999999999988763
No 309
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=98.74 E-value=8.6e-08 Score=73.76 Aligned_cols=90 Identities=12% Similarity=0.244 Sum_probs=69.9
Q ss_pred cCCceEEEEEeCc-cchHHHHHHHHHHHHHhc-CceEEEEEeCCCc----------------ccchhHHHHcCCCCCCce
Q 023747 36 IDTLDMVYVFAKA-DDLKSLLEPLEDIARNFK-GKIMFTAVDIADE----------------DLAKPFLTLFGLEESKNT 97 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~-~~v~f~~vd~~~~----------------~~~~~l~~~~~i~~~~Pt 97 (278)
.+++++|.||++| ++|+...|.+.++++++. ..+.|+.|+++.. +....+++.|+|.++ |+
T Consensus 40 ~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~-P~ 118 (158)
T 3hdc_A 40 RGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRYGANRL-PD 118 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSSSCCGGGGGCCCSCEEEECTTSHHHHHTTCCSS-SE
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCHHHHHHHHHcCCCceEEECchHHHHHHhCCCCc-ce
Confidence 4578999999999 999999999999999998 4599999999871 111689999999999 99
Q ss_pred EEEEecCCcceeecCCCC--CChHHHHHHHHH
Q 023747 98 VVTAFDNKAISKFLLESD--LTPSNIEEFCSR 127 (278)
Q Consensus 98 l~~~~~~~~~~~~~~~g~--~~~~~i~~fi~~ 127 (278)
+ .+++.++...+.+.|. .+..++.+.+..
T Consensus 119 ~-~lid~~G~i~~~~~G~~~~~~~~~~~~~~~ 149 (158)
T 3hdc_A 119 T-FIVDRKGIIRQRVTGGIEWDAPKVVSYLKS 149 (158)
T ss_dssp E-EEECTTSBEEEEEESCCCTTSHHHHHHHHT
T ss_pred E-EEEcCCCCEEEEEeCCCccchHHHHHHHHh
Confidence 8 6776555556666665 445555555543
No 310
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.73 E-value=8.9e-09 Score=73.39 Aligned_cols=79 Identities=11% Similarity=0.246 Sum_probs=60.7
Q ss_pred CCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCC--CC-CC-CCCCCcCCCeEEEEeCCCccCceEecCC
Q 023747 166 HKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDAS--AN-EH-PKLQVEEYPTLLFYPAGDKANPIKVSAR 241 (278)
Q Consensus 166 ~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~--~~-~~-~~~~i~~~Ptl~~f~~g~~~~~~~~~g~ 241 (278)
....+++|+++||++|+.+.+.+.+++. ++.|..+|++ ++ ++ .+|+ .++|++ |.+|+.. ..+.
T Consensus 15 ~~~~v~~f~~~~C~~C~~~~~~L~~l~~------~i~~~~vdi~~~~~~el~~~~g-~~vP~l--~~~g~~~----~~~g 81 (100)
T 1wjk_A 15 ALPVLTLFTKAPCPLCDEAKEVLQPYKD------RFILQEVDITLPENSTWYERYK-FDIPVF--HLNGQFL----MMHR 81 (100)
T ss_dssp CCCEEEEEECSSCHHHHHHHHHTSTTSS------SSEEEEEETTSSTTHHHHHHSS-SSCSEE--EESSSEE----EESS
T ss_pred CCCEEEEEeCCCCcchHHHHHHHHHhhh------CCeEEEEECCCcchHHHHHHHC-CCCCEE--EECCEEE----EecC
Confidence 4568999999999999999988876542 4889999998 44 44 4789 999986 4566532 3566
Q ss_pred CCHHHHHHHHHHHhcc
Q 023747 242 SSSKNIAAFIKEQLKE 257 (278)
Q Consensus 242 ~~~~~l~~~i~~~~~~ 257 (278)
.+.+.|.++|.+.+..
T Consensus 82 ~~~~~l~~~l~~~~~~ 97 (100)
T 1wjk_A 82 VNTSKLEKQLRKLSGP 97 (100)
T ss_dssp CCHHHHHHHHHSSSCS
T ss_pred CCHHHHHHHHHHHHhh
Confidence 8999999999876643
No 311
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=98.73 E-value=6.5e-08 Score=76.85 Aligned_cols=90 Identities=14% Similarity=0.148 Sum_probs=67.1
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCC---------CCC----C-CC--------------
Q 023747 165 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA---------NEH----P-KL-------------- 216 (278)
Q Consensus 165 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~---------~~~----~-~~-------------- 216 (278)
.+++++|.||++||++|....|.+.++..++++. ++.+..|+++. .++ . .|
T Consensus 45 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~-~~~vi~is~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~~ 123 (187)
T 3dwv_A 45 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQ-GFTVLAFPSNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNG 123 (187)
T ss_dssp TTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGG-TCEEEEEEBCCCSSCSSSBTTHHHHSCCBCCCCSSCBBCCBCCSC
T ss_pred CCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhC-CeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCCceeeccccCC
Confidence 4789999999999999999999999999999874 48888887652 111 1 11
Q ss_pred ------------------CCcCCC---eEEEE-eCCCccCceEecCCCCHHHHHHHHHHHhcc
Q 023747 217 ------------------QVEEYP---TLLFY-PAGDKANPIKVSARSSSKNIAAFIKEQLKE 257 (278)
Q Consensus 217 ------------------~i~~~P---tl~~f-~~g~~~~~~~~~g~~~~~~l~~~i~~~~~~ 257 (278)
++..+| +.+++ ++|+-. ..+.|..+.+.|.+.|.+.+..
T Consensus 124 ~~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i~--~~~~g~~~~~~l~~~i~~lL~~ 184 (187)
T 3dwv_A 124 ENAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVPV--ERFSPGASVKDIEEKLIPLLGS 184 (187)
T ss_dssp C-CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCEE--EEECTTCCHHHHHHHHHHHC--
T ss_pred cchhHHHHHHHhhcCCccCCCccccceeEEEECCCCCEE--EEECCCCCHHHHHHHHHHHHhc
Confidence 233566 88888 455433 3678889999999999988763
No 312
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=98.73 E-value=1.1e-07 Score=75.76 Aligned_cols=90 Identities=16% Similarity=0.146 Sum_probs=69.3
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCC-------C--CC---C------------------
Q 023747 165 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA-------N--EH---P------------------ 214 (278)
Q Consensus 165 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~-------~--~~---~------------------ 214 (278)
.+++++|.||++||++|....+.+.++...+.+. ++.++.|+++. . .+ .
T Consensus 47 ~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~-~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~D~~~ 125 (190)
T 2vup_A 47 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQ-GFTVLAFPCNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNG 125 (190)
T ss_dssp TTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGG-TCEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCBSSS
T ss_pred CCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcC-CeEEEEEEcCccCCCCCCCHHHHHHHHHHhcCCCeEEEeecccCc
Confidence 4789999999999999999999999999999863 48888888762 0 00 0
Q ss_pred -------------CCCCcCCC------eEEEE-eCCCccCceEecCCCCHHHHHHHHHHHhcc
Q 023747 215 -------------KLQVEEYP------TLLFY-PAGDKANPIKVSARSSSKNIAAFIKEQLKE 257 (278)
Q Consensus 215 -------------~~~i~~~P------tl~~f-~~g~~~~~~~~~g~~~~~~l~~~i~~~~~~ 257 (278)
.+++..+| +.+++ ++|+.+ .++.|..+.+.+.++|.+.+..
T Consensus 126 ~~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i~--~~~~g~~~~~~l~~~i~~ll~~ 186 (190)
T 2vup_A 126 ENAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVPV--ERFSPGASVKDIEKKLIPLLES 186 (190)
T ss_dssp TTBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCEE--EEECTTCCHHHHHHHHHHHHHC
T ss_pred ccccHHHHHHHhhcCCcCCCccccccceEEEECCCCcEE--EEECCCCCHHHHHHHHHHHHhh
Confidence 13667788 77766 555543 2678888999999999988753
No 313
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=98.73 E-value=4.9e-08 Score=70.17 Aligned_cols=77 Identities=9% Similarity=0.089 Sum_probs=64.7
Q ss_pred CceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCceEEEEecCCcceeecCCCCC
Q 023747 38 TLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFDNKAISKFLLESDL 116 (278)
Q Consensus 38 ~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Ptl~~~~~~~~~~~~~~~g~~ 116 (278)
...++.|+++| ++|+.+.+.+++++.++. +.|..+|.+++ +++..+||+. . |+| .++.++.. . ..|..
T Consensus 29 m~~vv~y~~~~C~~C~~a~~~L~~l~~e~~--i~~~~vDId~d---~~l~~~ygv~-V-P~l-~~~~dG~~-v--~~g~~ 97 (107)
T 2fgx_A 29 PRKLVVYGREGCHLCEEMIASLRVLQKKSW--FELEVINIDGN---EHLTRLYNDR-V-PVL-FAVNEDKE-L--CHYFL 97 (107)
T ss_dssp CCCEEEEECSSCHHHHHHHHHHHHHHHHSC--CCCEEEETTTC---HHHHHHSTTS-C-SEE-EETTTTEE-E--ECSSC
T ss_pred ccEEEEEeCCCChhHHHHHHHHHHHHHhcC--CeEEEEECCCC---HHHHHHhCCC-C-ceE-EEEECCEE-E--EecCC
Confidence 35789999999 999999999999999875 89999999988 8999999997 8 999 55554432 2 25778
Q ss_pred ChHHHHHHH
Q 023747 117 TPSNIEEFC 125 (278)
Q Consensus 117 ~~~~i~~fi 125 (278)
+.+.|.+|+
T Consensus 98 ~~~~L~~~L 106 (107)
T 2fgx_A 98 DSDVIGAYL 106 (107)
T ss_dssp CCHHHHHHH
T ss_pred CHHHHHHHh
Confidence 889998886
No 314
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=98.73 E-value=3.2e-08 Score=76.92 Aligned_cols=91 Identities=16% Similarity=0.160 Sum_probs=70.6
Q ss_pred ecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCc--------------------ccchhHHHHcCCCC
Q 023747 35 QIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADE--------------------DLAKPFLTLFGLEE 93 (278)
Q Consensus 35 ~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~--------------------~~~~~l~~~~~i~~ 93 (278)
..+++++|.||++| ++|+...|.+.+++++ .+.|+.|+++.. +....+++.|||.+
T Consensus 49 ~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~---~v~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 125 (168)
T 2b1k_A 49 TQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ---GIRVVGMNYKDDRQKAISWLKELGNPYALSLFDGDGMLGLDLGVYG 125 (168)
T ss_dssp CCSSCEEEEEECTTCHHHHHHHHHHHHHHHT---TCCEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTCHHHHHHTCCS
T ss_pred cCCCEEEEEEECCCCHHHHHHHHHHHHHHHC---CCEEEEEECCCChHHHHHHHHHcCCCCceeeECcchHHHHHcCccc
Confidence 35678999999999 9999999999999987 377777774321 11167999999999
Q ss_pred CCceEEEEecCCcceeecCCCCCChHHHHHHHHHHhc
Q 023747 94 SKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLH 130 (278)
Q Consensus 94 ~~Ptl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 130 (278)
+ |+. .+++.++...+.+.|..+.+.+.+++++.+.
T Consensus 126 ~-P~~-~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~ 160 (168)
T 2b1k_A 126 A-PET-FLIDGNGIIRYRHAGDLNPRVWEEEIKPLWE 160 (168)
T ss_dssp S-SEE-EEECTTSBEEEEEESCCCHHHHHHTTHHHHH
T ss_pred c-CEE-EEECCCCeEEEEEeCCCCHHHHHHHHHHHHH
Confidence 9 977 5555444456666788999999999888763
No 315
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=98.73 E-value=2.3e-08 Score=77.71 Aligned_cols=90 Identities=14% Similarity=0.149 Sum_probs=66.7
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCC----C-----CCC-----C---------------
Q 023747 165 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA----N-----EHP-----K--------------- 215 (278)
Q Consensus 165 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~----~-----~~~-----~--------------- 215 (278)
.+++++|.||++||++|....|.+.++...+.+. ++.+..|+++. . .+. +
T Consensus 30 ~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~-~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 108 (169)
T 2v1m_A 30 RGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGK-GLRILAFPCNQFGGQEPWAEAEIKKFVTEKYGVQFDMFSKIKVNG 108 (169)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG-TEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSEEBCCCCCSS
T ss_pred CCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcC-CeEEEEEECCccCCCCCCCHHHHHHHHHHhcCCCCceEEEEeecC
Confidence 4789999999999999999999999999999763 48888888752 0 000 0
Q ss_pred ------C--------C-----CcCCCeEEEEeCCCccCceEecCCCCHHHHHHHHHHHhc
Q 023747 216 ------L--------Q-----VEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLK 256 (278)
Q Consensus 216 ------~--------~-----i~~~Ptl~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~~ 256 (278)
| + +..+|+.+++...+++ ..++.|..+.+.+.+.|.+.+.
T Consensus 109 ~~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i-~~~~~g~~~~~~l~~~i~~ll~ 167 (169)
T 2v1m_A 109 SDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQP-VKRYSPTTAPYDIEGDIMELLE 167 (169)
T ss_dssp TTSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCE-EEEECTTSCGGGGHHHHHHHHH
T ss_pred ccccHHHHHHHhhcCCccCCcccccceEEEECCCCCE-EEEcCCCCCHHHHHHHHHHHhc
Confidence 1 2 3345888888443333 2367888888999999988765
No 316
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=98.72 E-value=1.4e-09 Score=79.46 Aligned_cols=77 Identities=8% Similarity=0.274 Sum_probs=53.6
Q ss_pred CcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC------CC-CCCCCcCCCeEEEEeCCCccCceEec
Q 023747 167 KDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN------EH-PKLQVEEYPTLLFYPAGDKANPIKVS 239 (278)
Q Consensus 167 ~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~------~~-~~~~i~~~Ptl~~f~~g~~~~~~~~~ 239 (278)
+.+++ ||++||++|+.+.+.+.+++. .+.++.+|.+.+ ++ ..+++.++|++ |.+|+.+. .+.
T Consensus 20 ~~vv~-f~a~~C~~C~~~~~~l~~~~~------~~~~v~v~~~~~~~~~~~~l~~~~~v~~~Pt~--~~~g~~v~--~~~ 88 (116)
T 2e7p_A 20 APVVV-FSKTYCGYCNRVKQLLTQVGA------SYKVVELDELSDGSQLQSALAHWTGRGTVPNV--FIGGKQIG--GCD 88 (116)
T ss_dssp SSEEE-EECTTCHHHHHHHHHHHHHTC------CCEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--EETTEEEE--CHH
T ss_pred CCEEE-EECCCChhHHHHHHHHHHcCC------CeEEEEccCCCChHHHHHHHHHHhCCCCcCEE--EECCEEEC--ChH
Confidence 45555 999999999999999988743 345666665553 24 36899999999 45776542 344
Q ss_pred CCC---CHHHHHHHHHHH
Q 023747 240 ARS---SSKNIAAFIKEQ 254 (278)
Q Consensus 240 g~~---~~~~l~~~i~~~ 254 (278)
|.. +.+.|.+||++.
T Consensus 89 ~~~~~~~~~~l~~~l~~~ 106 (116)
T 2e7p_A 89 TVVEKHQRNELLPLLQDA 106 (116)
T ss_dssp HHHHHHHTTCHHHHHHHT
T ss_pred HHHHHHhCChHHHHHHHc
Confidence 433 556788888663
No 317
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=98.72 E-value=6.1e-08 Score=75.28 Aligned_cols=89 Identities=13% Similarity=0.207 Sum_probs=68.0
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCC-------C--CC----C-CC--------------
Q 023747 165 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA-------N--EH----P-KL-------------- 216 (278)
Q Consensus 165 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~-------~--~~----~-~~-------------- 216 (278)
.+++++|.||++||++|....|.+.+++..+++. ++.++.|+++. . .+ . ++
T Consensus 31 ~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~-~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 109 (170)
T 2p5q_A 31 KGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQ-GLEILAFPCNQFGEEEPGTNDQITDFVCTRFKSEFPIFDKIDVNG 109 (170)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG-TEEEEEEECCTTTTCCCSCHHHHHHHHHHHTCCCSCBBCCCBSSS
T ss_pred CCCEEEEEEEeccCCccHHHHHHHHHHHHHhccC-CEEEEEEECCCCCCCCCCCHHHHHHHHHHhcCCCceeEeeeccCC
Confidence 4789999999999999999999999999999863 48999998752 0 01 1 11
Q ss_pred ---------------CC--cCCC---eEEEE-eCCCccCceEecCCCCHHHHHHHHHHHhc
Q 023747 217 ---------------QV--EEYP---TLLFY-PAGDKANPIKVSARSSSKNIAAFIKEQLK 256 (278)
Q Consensus 217 ---------------~i--~~~P---tl~~f-~~g~~~~~~~~~g~~~~~~l~~~i~~~~~ 256 (278)
++ ..+| +.+++ ++|+.. .++.|..+.+.|.++|.+.+.
T Consensus 110 ~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i~--~~~~g~~~~~~l~~~i~~ll~ 168 (170)
T 2p5q_A 110 ENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVV--DRYYPTTSPLSLERDIKQLLE 168 (170)
T ss_dssp TTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCEE--EEECTTSCGGGGHHHHHHHTT
T ss_pred CchHHHHHHHHhcCCCccCCcccccccEEEECCCCCEE--EeeCCCCCHHHHHHHHHHHhh
Confidence 23 5678 77777 555543 367888888999999988775
No 318
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=98.71 E-value=2.5e-08 Score=78.24 Aligned_cols=95 Identities=9% Similarity=0.086 Sum_probs=69.7
Q ss_pred eeeeeeecCCceEEEEEeCc-cchHHHHH-HH--HHHHHHhcCceEEEEEeCCCcccchhHHHHc--------CCCCCCc
Q 023747 29 ELLKVSQIDTLDMVYVFAKA-DDLKSLLE-PL--EDIARNFKGKIMFTAVDIADEDLAKPFLTLF--------GLEESKN 96 (278)
Q Consensus 29 ~~~~~~~~~~~~~v~F~~~~-~~c~~~~~-~~--~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~--------~i~~~~P 96 (278)
.+......+++++|.|+++| ++|+.+.| .| .++++.+++.+.+++||.++. +++.+.| |+.++ |
T Consensus 31 a~~~A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~~fv~ikVD~de~---~~l~~~y~~~~q~~~gv~g~-P 106 (173)
T 3ira_A 31 AFEKARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEAFVSIKVDREER---PDIDNIYMTVCQIILGRGGW-P 106 (173)
T ss_dssp HHHHHHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHHCEEEEEETTTC---HHHHHHHHHHHHHHHSCCCS-S
T ss_pred HHHHHHHhCCCEEEecccchhHhhccccccccCCHHHHHHHHhcCceeeeCCccc---CcHHHHHHHHHHHHcCCCCC-c
Confidence 34445567889999999999 99999999 33 578888887899999999988 8999988 99999 9
Q ss_pred eEEEEecCCcceeec--C---CCCCChHHHHHHHHHH
Q 023747 97 TVVTAFDNKAISKFL--L---ESDLTPSNIEEFCSRL 128 (278)
Q Consensus 97 tl~~~~~~~~~~~~~--~---~g~~~~~~i~~fi~~~ 128 (278)
|+ .+++.++...+. | .+..+...+.++++.+
T Consensus 107 t~-v~l~~dG~~v~~~ty~p~~~~~~~~~f~~~L~~v 142 (173)
T 3ira_A 107 LN-IIMTPGKKPFFAGTYIPKNTRFNQIGMLELVPRI 142 (173)
T ss_dssp EE-EEECTTSCEEEEESSCCSSCBTTBCCHHHHHHHH
T ss_pred ce-eeECCCCCceeeeeeCCCCcCCCCCCHHHHHHHH
Confidence 99 677643333331 1 1223444565665554
No 319
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=98.69 E-value=1e-07 Score=75.55 Aligned_cols=95 Identities=19% Similarity=0.318 Sum_probs=74.3
Q ss_pred CCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCc--------------------------ccchhHHHHc
Q 023747 37 DTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADE--------------------------DLAKPFLTLF 89 (278)
Q Consensus 37 ~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~--------------------------~~~~~l~~~~ 89 (278)
+++++|.||++| ++|+...|.+.+++++|.+++.|+.|+++.. +....+++.|
T Consensus 33 gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 112 (188)
T 2cvb_A 33 EPLLAVVFMCNHCPYVKGSIGELVALAERYRGKVAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDETQEVAKAY 112 (188)
T ss_dssp SSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTTEEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSSHHHHHT
T ss_pred CCEEEEEEECCCCccHHHHHHHHHHHHHHhhcCeEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCcchHHHHc
Confidence 478999999999 9999999999999999987799999998421 0115799999
Q ss_pred CCCCCCceEEEEecCCcceeec--------CCCCCChHHHHHHHHHHhcCcc
Q 023747 90 GLEESKNTVVTAFDNKAISKFL--------LESDLTPSNIEEFCSRLLHGTL 133 (278)
Q Consensus 90 ~i~~~~Ptl~~~~~~~~~~~~~--------~~g~~~~~~i~~fi~~~~~~~~ 133 (278)
++.+. |++ .+++..+...+. +.|..+.++|.+.+++++.+..
T Consensus 113 ~v~~~-P~~-~lid~~G~i~~~g~~~~~~~~~g~~~~~~l~~~i~~ll~~~~ 162 (188)
T 2cvb_A 113 RALRT-PEV-FLFDERRLLRYHGRVNDNPKDPSKVQSHDLEAAIEALLRGEE 162 (188)
T ss_dssp TCCEE-SEE-EEECTTCBEEEEECSSSCTTCGGGCCCCHHHHHHHHHHTTCC
T ss_pred CCCCC-CeE-EEECCCCcEEEEEecCCccccccccCHHHHHHHHHHHHcCCC
Confidence 99999 999 777655444443 1133478899999999987654
No 320
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=98.69 E-value=1.5e-07 Score=72.07 Aligned_cols=85 Identities=5% Similarity=0.039 Sum_probs=67.7
Q ss_pred cCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCc-eEEEEEeCCCccc-----------------ch---hHHHHcCCCC
Q 023747 36 IDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGK-IMFTAVDIADEDL-----------------AK---PFLTLFGLEE 93 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~-v~f~~vd~~~~~~-----------------~~---~l~~~~~i~~ 93 (278)
.+++++|.||++| ++|....|.+.+++++|++. +.|+.|+++.... .. .+++.|++.+
T Consensus 34 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~ 113 (152)
T 2lrt_A 34 KGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGDEHFWKTSADNLPWVCVRDANGAYSSYISLYNVTN 113 (152)
T ss_dssp GGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCHHHHHHHHTTCSSEEEECSSGGGCHHHHHHTCCS
T ss_pred CCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHhCCCceEEECCCCcchHHHHHcCccc
Confidence 3478999999999 99999999999999999875 9999999987620 00 2889999999
Q ss_pred CCceEEEEecCCcceeecCCCCCChHHHH
Q 023747 94 SKNTVVTAFDNKAISKFLLESDLTPSNIE 122 (278)
Q Consensus 94 ~~Ptl~~~~~~~~~~~~~~~g~~~~~~i~ 122 (278)
+ |++ .+++.++...+.+.|..+.++..
T Consensus 114 ~-P~~-~lid~~G~i~~~~~g~~~~e~~~ 140 (152)
T 2lrt_A 114 L-PSV-FLVNRNNELSARGENIKDLDEAI 140 (152)
T ss_dssp C-SEE-EEEETTTEEEEETTTCSCHHHHH
T ss_pred C-ceE-EEECCCCeEEEecCCHHHHHHHH
Confidence 9 999 77776555666677777655543
No 321
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=98.68 E-value=6.9e-08 Score=72.70 Aligned_cols=86 Identities=7% Similarity=0.189 Sum_probs=67.6
Q ss_pred cCCceEEEEEeCc-cchHHHHHHHHH---HHHHhcCc-eEEEEEeCCCcccchhH------------------------H
Q 023747 36 IDTLDMVYVFAKA-DDLKSLLEPLED---IARNFKGK-IMFTAVDIADEDLAKPF------------------------L 86 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~~~~~~~---la~~~~~~-v~f~~vd~~~~~~~~~l------------------------~ 86 (278)
.+++++|.||++| ++|+...|.+.+ +++++++. +.|+.|+.+.. ... +
T Consensus 26 ~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~---~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 102 (142)
T 3ewl_A 26 KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDEN---REEWATKAVYMPQGWIVGWNKAGDIRTR 102 (142)
T ss_dssp CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSC---HHHHHHHHTTSCTTCEEEECTTCHHHHT
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCC---HHHHHHHHHHcCCCcceeeCCccchhhH
Confidence 4578999999999 999999999998 89988653 99999988865 332 3
Q ss_pred HHcCCCCCCceEEEEecCCcceeecCCCCCChHHHHHHHHHHh
Q 023747 87 TLFGLEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLL 129 (278)
Q Consensus 87 ~~~~i~~~~Ptl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 129 (278)
+.|+|.++ |++ .+++.++...+ +..+.+++.+++++..
T Consensus 103 ~~~~v~~~-P~~-~lid~~G~i~~---~~~~~~~l~~~l~~~~ 140 (142)
T 3ewl_A 103 QLYDIRAT-PTI-YLLDGRKRVIL---KDTSMEQLIDYLATQA 140 (142)
T ss_dssp TCSCCCSS-SEE-EEECTTCBEEE---CSCCHHHHHHHHHC--
T ss_pred HHcCCCCC-CeE-EEECCCCCEEe---cCCCHHHHHHHHHHHc
Confidence 38999999 999 77775544444 5688999999998753
No 322
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=98.67 E-value=2.7e-08 Score=77.68 Aligned_cols=83 Identities=10% Similarity=-0.088 Sum_probs=63.2
Q ss_pred CCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcC---CCCCCceEEEEecCCcceeecC
Q 023747 37 DTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFG---LEESKNTVVTAFDNKAISKFLL 112 (278)
Q Consensus 37 ~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~---i~~~~Ptl~~~~~~~~~~~~~~ 112 (278)
+++++|.||++| ++|+...|.+.+++..+. .+.|..||.+.. ++++.+|+ +.+. ||+ .++++++.....+
T Consensus 54 ~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~-~v~~~~v~~d~~---~~~~~~~~~~~v~~i-Pt~-i~~~~~G~~~~~~ 127 (167)
T 1z6n_A 54 RRYRLLVAGEMWCPDCQINLAALDFAQRLQP-NIELAIISKGRA---EDDLRQRLALERIAI-PLV-LVLDEEFNLLGRF 127 (167)
T ss_dssp SCEEEEEECCTTCHHHHHHHHHHHHHHHHCT-TEEEEEECHHHH---HHHTTTTTTCSSCCS-SEE-EEECTTCCEEEEE
T ss_pred CCEEEEEEECCCChhHHHHHHHHHHHHHHCC-CcEEEEEECCCC---HHHHHHHHHcCCCCc-CeE-EEECCCCCEEEEE
Confidence 467899999999 999999999999999886 499999999887 88999997 9999 999 6666543332223
Q ss_pred CCCCChHHHHHHHHH
Q 023747 113 ESDLTPSNIEEFCSR 127 (278)
Q Consensus 113 ~g~~~~~~i~~fi~~ 127 (278)
|... ..+.+++.+
T Consensus 128 -g~~p-~~~~~~i~~ 140 (167)
T 1z6n_A 128 -VERP-QAVLDGGPQ 140 (167)
T ss_dssp -ESSC-HHHHHHCHH
T ss_pred -cCCC-HHHHHhHHH
Confidence 3332 344444444
No 323
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=98.67 E-value=1.8e-07 Score=77.30 Aligned_cols=61 Identities=15% Similarity=0.145 Sum_probs=44.8
Q ss_pred CCceEEEEE-eCc-cchH-HHHHHHHHHHHHhcC-ce-EEEEEeCCCcccchhHHHHcCCCCCCceE
Q 023747 37 DTLDMVYVF-AKA-DDLK-SLLEPLEDIARNFKG-KI-MFTAVDIADEDLAKPFLTLFGLEESKNTV 98 (278)
Q Consensus 37 ~~~~~v~F~-~~~-~~c~-~~~~~~~~la~~~~~-~v-~f~~vd~~~~~~~~~l~~~~~i~~~~Ptl 98 (278)
++++++.|| +.| ++|. ...|.+.+++++|++ .+ .+..|+.+......++++++++..+ |.+
T Consensus 33 gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~-~~l 98 (241)
T 1nm3_A 33 NKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVNDTFVMNAWKEDEKSENI-SFI 98 (241)
T ss_dssp TSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTCTTS-EEE
T ss_pred CCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEcCCHHHHHHHHHhcCCCce-EEE
Confidence 467888888 899 9999 899999999999964 38 8888887754222455666666545 533
No 324
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=98.66 E-value=4.5e-08 Score=67.76 Aligned_cols=74 Identities=12% Similarity=0.140 Sum_probs=60.0
Q ss_pred EEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCceEEEEecCCcceeecCCCCCChH
Q 023747 41 MVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFDNKAISKFLLESDLTPS 119 (278)
Q Consensus 41 ~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Ptl~~~~~~~~~~~~~~~g~~~~~ 119 (278)
++.|+++| ++|+.+.|.+++++.++ +..||.+++ ++++.+||+. . |++ .+ .+|.. . .|..+.+
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~-----~~~vdid~~---~~l~~~~g~~-v-Ptl-~~-~~G~~-v---~g~~~~~ 66 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA-----FFSVFIDDD---AALESAYGLR-V-PVL-RD-PMGRE-L---DWPFDAP 66 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC-----EEEEECTTC---HHHHHHHTTT-C-SEE-EC-TTCCE-E---ESCCCHH
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh-----eEEEECCCC---HHHHHHhCCC-c-CeE-EE-ECCEE-E---eCCCCHH
Confidence 78899999 99999999999887654 688999998 8999999998 8 999 44 33322 2 2778999
Q ss_pred HHHHHHHHHhc
Q 023747 120 NIEEFCSRLLH 130 (278)
Q Consensus 120 ~i~~fi~~~~~ 130 (278)
.|.+++...+.
T Consensus 67 ~L~~~l~~~~~ 77 (87)
T 1ttz_A 67 RLRAWLDAAPH 77 (87)
T ss_dssp HHHHHHHTCC-
T ss_pred HHHHHHHHHHH
Confidence 99999987553
No 325
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.66 E-value=5.3e-08 Score=77.87 Aligned_cols=89 Identities=10% Similarity=0.134 Sum_probs=69.1
Q ss_pred CCcEEEEEE-CCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC--------------------------CC-CCCC
Q 023747 166 HKDVLLEVY-TPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN--------------------------EH-PKLQ 217 (278)
Q Consensus 166 ~~~~~v~f~-~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~--------------------------~~-~~~~ 217 (278)
+++++|.|| ++||++|....+.+.++...+... ++.+..|+.+.. .+ ..|+
T Consensus 45 gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~-~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 123 (195)
T 2bmx_A 45 GKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDR-DAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAAG 123 (195)
T ss_dssp TCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTT-TEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHHT
T ss_pred CCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHHHhC
Confidence 689999999 999999999999999999999864 588888888641 11 2457
Q ss_pred Cc-----CCCeEEEEeCCCccCceEecCCC----CHHHHHHHHHHHhc
Q 023747 218 VE-----EYPTLLFYPAGDKANPIKVSARS----SSKNIAAFIKEQLK 256 (278)
Q Consensus 218 i~-----~~Ptl~~f~~g~~~~~~~~~g~~----~~~~l~~~i~~~~~ 256 (278)
+. .+|+++++..++.+ ...+.|.. +.+.+.++|++...
T Consensus 124 v~~~~g~~~P~~~lid~~G~i-~~~~~g~~~~~~~~~~l~~~l~~l~~ 170 (195)
T 2bmx_A 124 VLNADGVADRVTFIVDPNNEI-QFVSATAGSVGRNVDEVLRVLDALQS 170 (195)
T ss_dssp CBCTTSSBCEEEEEECTTSBE-EEEEEECTTCCCCHHHHHHHHHHHHC
T ss_pred CcccCCCccceEEEEcCCCeE-EEEEecCCCCCCCHHHHHHHHHHHhh
Confidence 88 89999999644444 22455543 78999999988775
No 326
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=98.65 E-value=3.8e-08 Score=78.13 Aligned_cols=107 Identities=10% Similarity=0.155 Sum_probs=70.5
Q ss_pred CCcEEEEEE-CCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCC-------------------------C-CC-CCCC
Q 023747 166 HKDVLLEVY-TPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA-------------------------N-EH-PKLQ 217 (278)
Q Consensus 166 ~~~~~v~f~-~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~-------------------------~-~~-~~~~ 217 (278)
+++++|.|| ++||++|....+.+.+++..+... ++.+..|+++. + .+ ..|+
T Consensus 31 gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~-~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 109 (187)
T 1we0_A 31 GKWSIVVFYPADFSFVCPTELEDVQKEYAELKKL-GVEVYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPSQTISRQFD 109 (187)
T ss_dssp SSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHT-TEEEEEEESSCHHHHHHHHHSCHHHHTCCSEEEECTTCHHHHHTT
T ss_pred CCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHc-CCEEEEEECCCHHHHHHHHHHhccccCCCceEEECCchHHHHHhC
Confidence 689999999 999999999999999999999753 58888888874 1 12 2467
Q ss_pred Cc------CCCeEEEEeCCCccCceEecCC----CCHHHHHHHHHHHhcccC--CCCchhhhhhhccCC
Q 023747 218 VE------EYPTLLFYPAGDKANPIKVSAR----SSSKNIAAFIKEQLKEKD--QSPKDEQWKEKDQAP 274 (278)
Q Consensus 218 i~------~~Ptl~~f~~g~~~~~~~~~g~----~~~~~l~~~i~~~~~~~~--~~~~~~~~~~~~~~~ 274 (278)
+. .+|+++++...+.+ ...+.|. .+.+.+.+.|++...... ...--..|..|++.+
T Consensus 110 v~~~~~g~~~P~~~lid~~G~i-~~~~~g~~~~~~~~~~l~~~l~~l~~~~~~~~~~~p~~w~~~~~~~ 177 (187)
T 1we0_A 110 VLNEETGLADRGTFIIDPDGVI-QAIEINADGIGRDASTLINKVKAAQYVRENPGEVCPAKWEEGGETL 177 (187)
T ss_dssp CEETTTTEECEEEEEECTTSBE-EEEEEECTTSCCCTTHHHHHHHHHHHHHTSTTCCC-----------
T ss_pred CCcCCCCceeeEEEEECCCCeE-EEEEecCCCCCCCHHHHHHHHHHHhhhhhCCCcccccccccCCcee
Confidence 77 89999999544433 2245554 367899999987775322 233335566665544
No 327
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.63 E-value=1.4e-07 Score=72.92 Aligned_cols=87 Identities=7% Similarity=0.040 Sum_probs=64.4
Q ss_pred CCc-EEEEEE-CCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCC---------------------C-CC-CCCCCcC
Q 023747 166 HKD-VLLEVY-TPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA---------------------N-EH-PKLQVEE 220 (278)
Q Consensus 166 ~~~-~~v~f~-~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~---------------------~-~~-~~~~i~~ 220 (278)
++. ++|.|| ++||++|....+.+.+++.+++.. ++.++.|+.+. . .+ ..|++.+
T Consensus 28 gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~-~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 106 (161)
T 3drn_A 28 GKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDY-DVVVIGVSSDDINSHKRFKEKYKLPFILVSDPDKKIRELYGAKG 106 (161)
T ss_dssp TTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTT-CEEEEEEESCCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCCC
T ss_pred CCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHc-CCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHcCCCC
Confidence 566 999999 999999999999999999999864 48888888872 2 23 3678888
Q ss_pred ----CCeEEEEeCCCccCceEecCC----CCHHHHHHHHHHH
Q 023747 221 ----YPTLLFYPAGDKANPIKVSAR----SSSKNIAAFIKEQ 254 (278)
Q Consensus 221 ----~Ptl~~f~~g~~~~~~~~~g~----~~~~~l~~~i~~~ 254 (278)
+|+.+++..++.+ ...+.|. ...+.+++.|++.
T Consensus 107 ~~~~~P~~~lid~~G~i-~~~~~g~~~~~~~~~~il~~l~~l 147 (161)
T 3drn_A 107 FILPARITFVIDKKGII-RHIYNSQMNPANHVNEALKALKQI 147 (161)
T ss_dssp SSSCCCEEEEECTTSBE-EEEEECSSCTTHHHHHHHHHHHHH
T ss_pred cCcccceEEEECCCCEE-EEEEecCCCCCcCHHHHHHHHHHh
Confidence 9999999644444 2356663 2335566666544
No 328
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=98.63 E-value=1.8e-08 Score=69.20 Aligned_cols=75 Identities=21% Similarity=0.298 Sum_probs=57.1
Q ss_pred EEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-----CC-CCCC--CcCCCeEEEEeCCCccCceEecC
Q 023747 169 VLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-----EH-PKLQ--VEEYPTLLFYPAGDKANPIKVSA 240 (278)
Q Consensus 169 ~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-----~~-~~~~--i~~~Ptl~~f~~g~~~~~~~~~g 240 (278)
-++.|+++||++|+.+.+.+++++..+. ++.+..+|++.+ ++ ..++ +.++|+++ .+|+.+ |
T Consensus 2 ~v~~f~~~~C~~C~~~~~~l~~l~~~~~---~i~~~~vdi~~~~~~~~~l~~~~~~~~~~vP~i~--~~g~~i------~ 70 (85)
T 1ego_A 2 QTVIFGRSGCPYCVRAKDLAEKLSNERD---DFQYQYVDIRAEGITKEDLQQKAGKPVETVPQIF--VDQQHI------G 70 (85)
T ss_dssp EEEEECCTTSTHHHHHHHHHHHHHHHHS---SCEEEEECHHHHTCCSHHHHHHTCCCSCCSCEEE--ETTEEE------E
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHhcCC---CceEEEEecccChHHHHHHHHHhCCCCceeCeEE--ECCEEE------E
Confidence 3678999999999999999999998876 488899998654 23 3567 89999983 366432 2
Q ss_pred CCCHHHHHHHHHHHhc
Q 023747 241 RSSSKNIAAFIKEQLK 256 (278)
Q Consensus 241 ~~~~~~l~~~i~~~~~ 256 (278)
. .++|.+++.+..+
T Consensus 71 ~--~~~l~~~~~~~~~ 84 (85)
T 1ego_A 71 G--YTDFAAWVKENLD 84 (85)
T ss_dssp S--SHHHHHHHHHHHH
T ss_pred C--HHHHHHHHHHhcC
Confidence 2 2689999887653
No 329
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=98.63 E-value=5.2e-09 Score=71.27 Aligned_cols=59 Identities=19% Similarity=0.312 Sum_probs=43.8
Q ss_pred EEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCC-CC-CC-CCCCCcCCCeEEEEeCCC
Q 023747 169 VLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDAS-AN-EH-PKLQVEEYPTLLFYPAGD 231 (278)
Q Consensus 169 ~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~-~~-~~-~~~~i~~~Ptl~~f~~g~ 231 (278)
-+++||++||++|+.+.+.+++++..+.. .+.+..+|.+ .. +. .++++.++|++++ +|+
T Consensus 3 ~~~~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~gv~~vPt~~i--~g~ 64 (80)
T 2k8s_A 3 SKAIFYHAGCPVCVSAEQAVANAIDPSKY--TVEIVHLGTDKARIAEAEKAGVKSVPALVI--DGA 64 (80)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHSCTTTE--EEEEEETTTCSSTHHHHHHHTCCEEEEEEE--TTE
T ss_pred ceEEEeCCCCCchHHHHHHHHHHHHhcCC--eEEEEEecCChhhHHHHHHcCCCcCCEEEE--CCE
Confidence 36789999999999999999988766532 3555555543 22 33 4789999999987 554
No 330
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.62 E-value=4.3e-07 Score=71.68 Aligned_cols=94 Identities=12% Similarity=0.114 Sum_probs=73.2
Q ss_pred cCCceEEEEEeCc-cchHHHHHHHHHHHHHhc-CceEEEEEeCCCc--ccchhHHHHcCCC-------------------
Q 023747 36 IDTLDMVYVFAKA-DDLKSLLEPLEDIARNFK-GKIMFTAVDIADE--DLAKPFLTLFGLE------------------- 92 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~-~~v~f~~vd~~~~--~~~~~l~~~~~i~------------------- 92 (278)
.+++++|.||++| ++|....|.+.+++++|+ ..+.++.|+++.. .....+++++++.
T Consensus 59 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 138 (186)
T 1jfu_A 59 RGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQDLKAI 138 (186)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHHHHHHTT
T ss_pred CCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcchHHHHhccc
Confidence 4578999999999 999999999999999998 4589999988754 1224677777774
Q ss_pred ----CCCceEEEEecCCcceeecCCCCC--ChHHHHHHHHHHhcC
Q 023747 93 ----ESKNTVVTAFDNKAISKFLLESDL--TPSNIEEFCSRLLHG 131 (278)
Q Consensus 93 ----~~~Ptl~~~~~~~~~~~~~~~g~~--~~~~i~~fi~~~~~~ 131 (278)
++ |++ .+++.++...+.+.|.. +.+++.++++..+.+
T Consensus 139 ~~~~~~-P~~-~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll~~ 181 (186)
T 1jfu_A 139 GRALGM-PTS-VLVDPQGCEIATIAGPAEWASEDALKLIRAATGK 181 (186)
T ss_dssp TCCSSS-SEE-EEECTTSBEEEEEESCCCTTSHHHHHHHHHHHC-
T ss_pred cccCCC-CEE-EEECCCCCEEEEEecCCccCHHHHHHHHHHHhcc
Confidence 77 999 77765555566666765 478999999998754
No 331
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=98.05 E-value=4.1e-09 Score=79.54 Aligned_cols=67 Identities=13% Similarity=0.263 Sum_probs=53.1
Q ss_pred CC-cEEEEEECCCChhHHHHHHHHHHHHHHhcCC-CceEEEEEeCCCC--------------------------CC-CCC
Q 023747 166 HK-DVLLEVYTPWCVTCETTSKQIEKLAKHFKGL-DNLVIAKIDASAN--------------------------EH-PKL 216 (278)
Q Consensus 166 ~~-~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~-~~~~~~~vd~~~~--------------------------~~-~~~ 216 (278)
++ +++|.||++||++|..+.|.+.++++.++.. .++.++.|+++.. ++ ..|
T Consensus 25 gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (143)
T 2lus_A 25 DKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESHGDWLAIPYRSGPASNVTAKY 104 (143)
Confidence 55 9999999999999999999999999998432 1577777776643 23 367
Q ss_pred CCcCCCeEEEEe-CCCc
Q 023747 217 QVEEYPTLLFYP-AGDK 232 (278)
Q Consensus 217 ~i~~~Ptl~~f~-~g~~ 232 (278)
++..+|+++++. +|+.
T Consensus 105 ~v~~~P~~~lid~~G~i 121 (143)
T 2lus_A 105 GITGIPALVIVKKDGTL 121 (143)
Confidence 899999999996 5553
No 332
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=98.61 E-value=9e-08 Score=75.57 Aligned_cols=88 Identities=9% Similarity=0.091 Sum_probs=65.6
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCC-------C--CC----CC----------------
Q 023747 165 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA-------N--EH----PK---------------- 215 (278)
Q Consensus 165 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~-------~--~~----~~---------------- 215 (278)
.+++++|.||++||++|....|.+.+++.++++. ++.+..|+++. . .+ .+
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~-~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~g 126 (181)
T 2p31_A 48 RGSVSLVVNVASECGFTDQHYRALQQLQRDLGPH-HFNVLAFPCNQFGQQEPDSNKEIESFARRTYSVSFPMFSKIAVTG 126 (181)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG-TEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCSS
T ss_pred CCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcC-CEEEEEEECcCCCCCCCCCHHHHHHHHHhhcCCCceeEeecccCC
Confidence 3689999999999999999999999999999863 48899998753 0 00 01
Q ss_pred --------CCCcCCC-------eEEEE-eCCCccCceEecCCCCHHHHHHHHHHHh
Q 023747 216 --------LQVEEYP-------TLLFY-PAGDKANPIKVSARSSSKNIAAFIKEQL 255 (278)
Q Consensus 216 --------~~i~~~P-------tl~~f-~~g~~~~~~~~~g~~~~~~l~~~i~~~~ 255 (278)
|.+..+| +.+++ ++|+.+ .++.|..+.+.|.+.|.+.+
T Consensus 127 ~~~~~~~~~~~~~~P~~~~~~~~~~lid~~G~i~--~~~~g~~~~~~l~~~i~~ll 180 (181)
T 2p31_A 127 TGAHPAFKYLAQTSGKEPTWNFWKYLVAPDGKVV--GAWDPTVSVEEVRPQITALV 180 (181)
T ss_dssp TTSCHHHHHHHHHHSCCCCSTTCEEEECTTSCEE--EEECTTSCHHHHHHHHHTTC
T ss_pred ccchhhhhhhhhcCCCccccceeEEEEcCCCCEE--EEeCCCCCHHHHHHHHHHHh
Confidence 1244578 66666 555543 26788889999999987654
No 333
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=98.61 E-value=1.4e-07 Score=74.54 Aligned_cols=88 Identities=10% Similarity=0.026 Sum_probs=63.6
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCC-------C--CC----CC----------------
Q 023747 165 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA-------N--EH----PK---------------- 215 (278)
Q Consensus 165 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~-------~--~~----~~---------------- 215 (278)
.+++++|.||++||++|....+.+.++...+... ++.+..|+++. . ++ .+
T Consensus 46 ~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~-~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 124 (183)
T 2obi_A 46 RGFVCIVTNVASQCGKTEVNYTQLVDLHARYAEC-GLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNGD 124 (183)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG-TEEEEEEECCCSTTCCCSCHHHHHHHHHTTTCCSEEBCCCCCSST
T ss_pred CCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcC-CeEEEEEECCCCCCCCCCCHHHHHHHHHHcCCCceEEeeeccCCc
Confidence 3689999999999999999999999999999763 48888888752 0 00 00
Q ss_pred -----C----------C-----CcCCCeEEEEeCCCccCceEecCCCCHHHHHHHHHHH
Q 023747 216 -----L----------Q-----VEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQ 254 (278)
Q Consensus 216 -----~----------~-----i~~~Ptl~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~ 254 (278)
| + +..+|+.+++..++.+ ..++.|..+.+.|.++|++.
T Consensus 125 ~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i-~~~~~g~~~~~~l~~~i~~l 182 (183)
T 2obi_A 125 DAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCV-VKRYGPMEEPLVIEKDLPHY 182 (183)
T ss_dssp TSCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCE-EEEECTTSCTHHHHTTSGGG
T ss_pred chhHHHHHhhccCCCCCcccccccccceEEEECCCCCE-EEEeCCCCCHHHHHHHHHHh
Confidence 1 2 3335998888444333 23678888888888777543
No 334
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=98.61 E-value=8.4e-08 Score=73.55 Aligned_cols=79 Identities=6% Similarity=-0.074 Sum_probs=54.1
Q ss_pred eeeeecCCceEEEEEeCc-cchHHHHHHHHHHH---HHhcCceEEEEEeCCCcccchhHHHHcCCCCCCceEEEEecCCc
Q 023747 31 LKVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIA---RNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFDNKA 106 (278)
Q Consensus 31 ~~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la---~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Ptl~~~~~~~~ 106 (278)
....+.+++++|.||++| ++|+.+.|.+.+.. ...+..+..+.+|. +. ..++..+++.++ ||+ .+++.++
T Consensus 38 ~~A~~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~~fv~V~vD~-e~---~~~~~~~~v~~~-PT~-~f~~~~G 111 (151)
T 3ph9_A 38 FYAQKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQNKFIMLNLMH-ET---TDKNLSPDGQYV-PRI-MFVDPSL 111 (151)
T ss_dssp HHHHHHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHHTCEEEEESS-CC---SCGGGCTTCCCS-SEE-EEECTTS
T ss_pred HHHHHcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhcCeEEEEecC-Cc---hhhHhhcCCCCC-CEE-EEECCCC
Confidence 334456789999999999 99999999998643 22222344444442 23 456788999999 999 7776333
Q ss_pred ceeecCCCC
Q 023747 107 ISKFLLESD 115 (278)
Q Consensus 107 ~~~~~~~g~ 115 (278)
.......|.
T Consensus 112 ~~v~~~~G~ 120 (151)
T 3ph9_A 112 TVRADIAGR 120 (151)
T ss_dssp CBCTTCCCS
T ss_pred CEEEEEeCC
Confidence 345555665
No 335
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=98.61 E-value=2.4e-07 Score=74.92 Aligned_cols=44 Identities=18% Similarity=0.172 Sum_probs=39.2
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCC
Q 023747 165 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDAS 209 (278)
Q Consensus 165 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~ 209 (278)
.+++++|.||++||++|....|.+.+++.+++.. .+.+..|+++
T Consensus 46 ~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~-g~~vv~v~~d 89 (208)
T 2f8a_A 46 RGKVLLIENVASLGGTTVRDYTQMNELQRRLGPR-GLVVLGFPCN 89 (208)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG-TEEEEEEECC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHccCC-CeEEEEEECC
Confidence 3689999999999999999999999999999763 5889889875
No 336
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=98.60 E-value=2.8e-07 Score=75.05 Aligned_cols=96 Identities=15% Similarity=0.222 Sum_probs=74.9
Q ss_pred cCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCc-eEEEEEeCCCc--------------------------ccchhHHH
Q 023747 36 IDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGK-IMFTAVDIADE--------------------------DLAKPFLT 87 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~-v~f~~vd~~~~--------------------------~~~~~l~~ 87 (278)
++.+++|.||++| ++|....|.+.+++++|+++ +.|+.|+++.. +....+++
T Consensus 58 gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 137 (218)
T 3u5r_E 58 DSPALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFPEETLERVGAEVKAYGYGFPYLKDASQSVAK 137 (218)
T ss_dssp TCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECTTCHHHH
T ss_pred CCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccccCCHHHHHHHHHHhCCCccEEECCccHHHH
Confidence 3335999999999 99999999999999999876 99999998521 01158999
Q ss_pred HcCCCCCCceEEEEecCCcceeec---------CCCCCChHHHHHHHHHHhcCcc
Q 023747 88 LFGLEESKNTVVTAFDNKAISKFL---------LESDLTPSNIEEFCSRLLHGTL 133 (278)
Q Consensus 88 ~~~i~~~~Ptl~~~~~~~~~~~~~---------~~g~~~~~~i~~fi~~~~~~~~ 133 (278)
.|+|.+. |++ .+++.++...|. ..+..+.++|.+.++.+++++.
T Consensus 138 ~~~v~~~-P~~-~liD~~G~i~~~g~~d~~~~~~~~~~~~~~l~~~i~~ll~~~~ 190 (218)
T 3u5r_E 138 AYGAACT-PDF-FLYDRERRLVYHGQFDDARPGNGKDVTGADLRAAVDAVLKGKD 190 (218)
T ss_dssp HHTCCEE-SEE-EEECTTCBEEEEECSSSCCTTSCCCCCCHHHHHHHHHHHTTCC
T ss_pred HcCCCCC-CeE-EEECCCCcEEEeccccccccccccccCHHHHHHHHHHHHcCCC
Confidence 9999999 999 777655544442 1234568999999999987754
No 337
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=98.59 E-value=2e-07 Score=73.18 Aligned_cols=89 Identities=13% Similarity=0.167 Sum_probs=71.7
Q ss_pred CCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCc--------------------ccchhHHHHcCCCCCC
Q 023747 37 DTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADE--------------------DLAKPFLTLFGLEESK 95 (278)
Q Consensus 37 ~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~--------------------~~~~~l~~~~~i~~~~ 95 (278)
+++++|.||++| ++|....|.+.+++++ + +.|+.|++++. +....+++.|++.++
T Consensus 58 gk~vll~F~a~~C~~C~~~~~~l~~l~~~--~-v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~- 133 (176)
T 3kh7_A 58 GKPALVNVWGTWCPSCRVEHPELTRLAEQ--G-VVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGTLGLDLGVYGA- 133 (176)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHT--T-CEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCHHHHHHTCCSS-
T ss_pred CCEEEEEEECCcCHHHHHHHHHHHHHHHC--C-CEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcchHHHHcCCCCC-
Confidence 578999999999 9999999999999988 4 78877775321 111578999999999
Q ss_pred ceEEEEecCCcceeecCCCCCChHHHHHHHHHHhc
Q 023747 96 NTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLH 130 (278)
Q Consensus 96 Ptl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 130 (278)
|++ .+++.++...+.+.|..+.+.+.+++.+.+.
T Consensus 134 P~~-~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~ 167 (176)
T 3kh7_A 134 PET-YLIDKQGIIRHKIVGVVDQKVWREQLAPLYQ 167 (176)
T ss_dssp CEE-EEECTTCBEEEEEESCCCHHHHHHHTHHHHH
T ss_pred CeE-EEECCCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 988 6776665667777888999999999888764
No 338
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=98.58 E-value=2.3e-07 Score=81.06 Aligned_cols=92 Identities=10% Similarity=0.058 Sum_probs=76.5
Q ss_pred CCceEEEEEeCc-cchHHHHHHHHHHHHHhcC-ceEEEEEeCCCc------------------------ccchhHHHHcC
Q 023747 37 DTLDMVYVFAKA-DDLKSLLEPLEDIARNFKG-KIMFTAVDIADE------------------------DLAKPFLTLFG 90 (278)
Q Consensus 37 ~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~-~v~f~~vd~~~~------------------------~~~~~l~~~~~ 90 (278)
+++++|.||++| ++|+...|.+.+++++|++ .+.|+.|+++.. +....+++.|+
T Consensus 82 GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~~yg 161 (352)
T 2hyx_A 82 GKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATWTNYR 161 (352)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHHHHHTT
T ss_pred CCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHHHHHcC
Confidence 578999999999 9999999999999999986 499999987631 01147999999
Q ss_pred CCCCCceEEEEecCCcceeecCCCCCChHHHHHHHHHHhc
Q 023747 91 LEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLH 130 (278)
Q Consensus 91 i~~~~Ptl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 130 (278)
|.++ |++ .+++.++...+.+.|..+.+++.+++++++.
T Consensus 162 V~~~-Pt~-~lID~~G~Iv~~~~G~~~~~~l~~~I~~lL~ 199 (352)
T 2hyx_A 162 NRYW-PAE-YLIDATGTVRHIKFGEGDYNVTETLVRQLLN 199 (352)
T ss_dssp CCEE-SEE-EEECTTSBEEEEEESBCCHHHHHHHHHHHHH
T ss_pred CCcc-CEE-EEEeCCCeEEEEEcCCCCHHHHHHHHHHHHh
Confidence 9999 999 6776555566667888899999999999874
No 339
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=98.58 E-value=3.8e-07 Score=68.86 Aligned_cols=66 Identities=11% Similarity=0.080 Sum_probs=56.4
Q ss_pred cCCceEEEEEeCc-cchHHHHHHHHHHHHHhc--CceEEEEEeCCCcc---------------------cchhHHHHcCC
Q 023747 36 IDTLDMVYVFAKA-DDLKSLLEPLEDIARNFK--GKIMFTAVDIADED---------------------LAKPFLTLFGL 91 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~--~~v~f~~vd~~~~~---------------------~~~~l~~~~~i 91 (278)
.+++++|.||++| ++|+...|.+.+++++++ +.+.++.|+++... ....+++.|+|
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 106 (144)
T 1i5g_A 27 AGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLTTGFDV 106 (144)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHHHHHHcCC
Confidence 4578999999999 999999999999999998 46999999988631 12579999999
Q ss_pred CCCCceEEEEec
Q 023747 92 EESKNTVVTAFD 103 (278)
Q Consensus 92 ~~~~Ptl~~~~~ 103 (278)
.++ |++ .+++
T Consensus 107 ~~~-P~~-~lid 116 (144)
T 1i5g_A 107 KSI-PTL-VGVE 116 (144)
T ss_dssp CSS-SEE-EEEE
T ss_pred CCC-CEE-EEEE
Confidence 999 999 7776
No 340
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=98.57 E-value=3.4e-07 Score=70.27 Aligned_cols=93 Identities=13% Similarity=0.164 Sum_probs=71.8
Q ss_pred ecCCceEEEEEeCc-cchHHHHHHH---HHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCceEEEEecCC-ccee
Q 023747 35 QIDTLDMVYVFAKA-DDLKSLLEPL---EDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFDNK-AISK 109 (278)
Q Consensus 35 ~~~~~~~v~F~~~~-~~c~~~~~~~---~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Ptl~~~~~~~-~~~~ 109 (278)
+.+++++|.|+++| ..|+.+.... .++++.++..+.+..+|.+..+ +..+.++|++.++ |++ .+++.. +...
T Consensus 40 ~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~~fv~v~~d~~~~~-~~~l~~~y~v~~~-P~~-~fld~~~G~~l 116 (153)
T 2dlx_A 40 MQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDSEE-GQRYIQFYKLGDF-PYV-SILDPRTGQKL 116 (153)
T ss_dssp HHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHHTEEEEEEESSSHH-HHHHHHHHTCCSS-SEE-EEECTTTCCCC
T ss_pred HcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHcCeEEEEEecCCHh-HHHHHHHcCCCCC-CEE-EEEeCCCCcEe
Confidence 45789999999999 9999997655 6677666667999999997643 3689999999999 999 777654 2222
Q ss_pred ecCCCCCChHHHHHHHHHHhcC
Q 023747 110 FLLESDLTPSNIEEFCSRLLHG 131 (278)
Q Consensus 110 ~~~~g~~~~~~i~~fi~~~~~~ 131 (278)
..+.| .+.+++.+++++++..
T Consensus 117 ~~~~g-~~~~~fl~~L~~~l~~ 137 (153)
T 2dlx_A 117 VEWHQ-LDVSSFLDQVTGFLGE 137 (153)
T ss_dssp EEESS-CCHHHHHHHHHHHHHH
T ss_pred eecCC-CCHHHHHHHHHHHHHh
Confidence 22445 8999999999888743
No 341
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=98.56 E-value=1.8e-07 Score=70.50 Aligned_cols=85 Identities=14% Similarity=0.175 Sum_probs=65.2
Q ss_pred CCceEEEEEeCc-cchHHHHHHHHH---HHHHhcC-ceEEEEEeCCCcccc---------------------hhHHHHcC
Q 023747 37 DTLDMVYVFAKA-DDLKSLLEPLED---IARNFKG-KIMFTAVDIADEDLA---------------------KPFLTLFG 90 (278)
Q Consensus 37 ~~~~~v~F~~~~-~~c~~~~~~~~~---la~~~~~-~v~f~~vd~~~~~~~---------------------~~l~~~~~ 90 (278)
+++++|.||++| ++|+...|.+.+ +++++++ .+.++.|+.+..... ..+++.|+
T Consensus 31 gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 110 (142)
T 3eur_A 31 AEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEELDEWKKHRNDFAKEWTNGYDKELVIKNKNLYD 110 (142)
T ss_dssp CSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCHHHHHHHGGGSCTTSEEEECTTCHHHHTTCSC
T ss_pred CCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCHHHHHHHHHhcccccccccCccchhhhhhhcC
Confidence 478999999999 999999999999 9999964 499999988765110 01477899
Q ss_pred CCCCCceEEEEecCCcceeecCCCCCChHHHHHHHH
Q 023747 91 LEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCS 126 (278)
Q Consensus 91 i~~~~Ptl~~~~~~~~~~~~~~~g~~~~~~i~~fi~ 126 (278)
|.++ |++ .+++.++...+. ..+.+++.+|++
T Consensus 111 v~~~-P~~-~lid~~G~i~~~---~~~~~~l~~~l~ 141 (142)
T 3eur_A 111 LRAI-PTL-YLLDKNKTVLLK---DATLQKVEQYLA 141 (142)
T ss_dssp CTTC-SEE-EEECTTCBEEEE---EECHHHHHHHHH
T ss_pred CCcC-CeE-EEECCCCcEEec---CCCHHHHHHHHh
Confidence 9999 999 777765444442 246788888875
No 342
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=98.56 E-value=6.1e-08 Score=82.07 Aligned_cols=74 Identities=8% Similarity=-0.112 Sum_probs=58.6
Q ss_pred eEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCc---ccchhHHHHcCCCCCCceEEEEecCCcceeecCCCC
Q 023747 40 DMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADE---DLAKPFLTLFGLEESKNTVVTAFDNKAISKFLLESD 115 (278)
Q Consensus 40 ~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~---~~~~~l~~~~~i~~~~Ptl~~~~~~~~~~~~~~~g~ 115 (278)
.++.||++| ++|+++.|.|++++++++ .+||+.. +..+++|++++|+++ ||+ .+ ++ .+ +.|.
T Consensus 200 ~vV~F~A~WC~~Ck~l~p~le~lA~~l~------~Vd~d~~d~~~~~~~la~~~gI~~v-PT~-~i-~G---~~--~~G~ 265 (291)
T 3kp9_A 200 GGTMYGAYWCPHCQDQKELFGAAFDQVP------YVECSPNGPGTPQAQECTEAGITSY-PTW-II-NG---RT--YTGV 265 (291)
T ss_dssp TCEEEECTTCHHHHHHHHHHGGGGGGSC------EEESCSSCSSSCCCHHHHTTTCCST-TEE-EE-TT---EE--EESC
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHcC------EEEEeecCchhhHHHHHHHcCCccc-CeE-EE-CC---EE--ecCC
Confidence 579999999 999999999999997763 5566621 112799999999999 998 44 43 23 4899
Q ss_pred CChHHHHHHHHH
Q 023747 116 LTPSNIEEFCSR 127 (278)
Q Consensus 116 ~~~~~i~~fi~~ 127 (278)
++.+++.+|+.-
T Consensus 266 ~~~~~L~~~l~~ 277 (291)
T 3kp9_A 266 RSLEALAVASGY 277 (291)
T ss_dssp CCHHHHHHHTCC
T ss_pred CCHHHHHHHHCC
Confidence 999999998754
No 343
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=98.55 E-value=3.8e-07 Score=69.06 Aligned_cols=66 Identities=15% Similarity=0.195 Sum_probs=56.3
Q ss_pred cCCceEEEEEeCc-cchHHHHHHHHHHHHHhc--CceEEEEEeCCCcc---------------------cchhHHHHcCC
Q 023747 36 IDTLDMVYVFAKA-DDLKSLLEPLEDIARNFK--GKIMFTAVDIADED---------------------LAKPFLTLFGL 91 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~--~~v~f~~vd~~~~~---------------------~~~~l~~~~~i 91 (278)
.+++++|.||++| ++|+...|.+.+++++++ +.+.++.|+++... ....+++.|+|
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 106 (146)
T 1o8x_A 27 AGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFNV 106 (146)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTTC
T ss_pred CCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHHHHhCC
Confidence 4578999999999 999999999999999998 46999999888631 12579999999
Q ss_pred CCCCceEEEEec
Q 023747 92 EESKNTVVTAFD 103 (278)
Q Consensus 92 ~~~~Ptl~~~~~ 103 (278)
.++ |++ .+++
T Consensus 107 ~~~-Pt~-~lid 116 (146)
T 1o8x_A 107 ESI-PTL-IGVD 116 (146)
T ss_dssp CSS-SEE-EEEE
T ss_pred CCC-CEE-EEEE
Confidence 999 999 7776
No 344
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=98.54 E-value=8.9e-08 Score=76.71 Aligned_cols=89 Identities=12% Similarity=0.188 Sum_probs=68.4
Q ss_pred CCCcEEEEEE-CCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCC----------------------------C-CC-
Q 023747 165 SHKDVLLEVY-TPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA----------------------------N-EH- 213 (278)
Q Consensus 165 ~~~~~~v~f~-~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~----------------------------~-~~- 213 (278)
.+++++|.|| ++||++|....|.+.+++..++.. ++.+..|+++. + ++
T Consensus 32 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~-~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (198)
T 1zof_A 32 GKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEK-GFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSIS 110 (198)
T ss_dssp CSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHT-TEEEEEEESSCHHHHHHHHTSCGGGTCCCCCSSCEEECTTSHHH
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHc-CCEEEEEECCCHHHHHHHHHhhhhcccccCceeEEEECCchHHH
Confidence 4689999999 999999999999999999999753 58888888774 1 11
Q ss_pred CCCCCc-----CCCeEEEEeCCCccCceEecCCC----CHHHHHHHHHHHh
Q 023747 214 PKLQVE-----EYPTLLFYPAGDKANPIKVSARS----SSKNIAAFIKEQL 255 (278)
Q Consensus 214 ~~~~i~-----~~Ptl~~f~~g~~~~~~~~~g~~----~~~~l~~~i~~~~ 255 (278)
..|++. .+|+.+++..++.+ ...+.|.. +.+++.+.|++..
T Consensus 111 ~~~~v~~~~g~~~P~~~lid~~G~i-~~~~~g~~~~~~~~~~l~~~l~~l~ 160 (198)
T 1zof_A 111 RDYDVLFEEAIALRGAFLIDKNMKV-RHAVINDLPLGRNADEMLRMVDALL 160 (198)
T ss_dssp HHTTCEETTTEECEEEEEEETTTEE-EEEEEESSSCCCHHHHHHHHHHHHH
T ss_pred HHhCCcccCCcccceEEEECCCCEE-EEEEecCCCCCCCHHHHHHHHHHHH
Confidence 245787 89999999654444 22455543 6789999998776
No 345
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=98.52 E-value=4.8e-07 Score=68.17 Aligned_cols=66 Identities=11% Similarity=0.186 Sum_probs=56.1
Q ss_pred cCCceEEEEEeCc-cchHHHHHHHHHHHHHhc--CceEEEEEeCCCcc---------------------cchhHHHHcCC
Q 023747 36 IDTLDMVYVFAKA-DDLKSLLEPLEDIARNFK--GKIMFTAVDIADED---------------------LAKPFLTLFGL 91 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~--~~v~f~~vd~~~~~---------------------~~~~l~~~~~i 91 (278)
.+++++|.||++| ++|+...|.+.+++++++ +.+.++.|+++... ....+++.|+|
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 106 (144)
T 1o73_A 27 VGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFGV 106 (144)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHTC
T ss_pred CCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHcCC
Confidence 4578999999999 999999999999999998 46889999888631 12579999999
Q ss_pred CCCCceEEEEec
Q 023747 92 EESKNTVVTAFD 103 (278)
Q Consensus 92 ~~~~Ptl~~~~~ 103 (278)
.++ |++ .+++
T Consensus 107 ~~~-Pt~-~lid 116 (144)
T 1o73_A 107 ESI-PTL-ITIN 116 (144)
T ss_dssp CSS-SEE-EEEE
T ss_pred CCC-CEE-EEEE
Confidence 999 999 7777
No 346
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=98.52 E-value=1.3e-07 Score=74.49 Aligned_cols=89 Identities=15% Similarity=0.149 Sum_probs=64.0
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCC-------C--CC----CC-CC-------------
Q 023747 165 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA-------N--EH----PK-LQ------------- 217 (278)
Q Consensus 165 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~-------~--~~----~~-~~------------- 217 (278)
.+++++|.||++||++|....|.+.+++..+++. .+.+..|+++. . ++ .+ ++
T Consensus 37 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~-~~~vi~is~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~ 115 (180)
T 3kij_A 37 KGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPS-HFSVLAFPCNQFGESEPRPSKEVESFARKNYGVTFPIFHKIKILG 115 (180)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTT-SEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCSS
T ss_pred CCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccC-CeEEEEEECCccccCCCCCHHHHHHHHHHhcCCCCceeeeeeccC
Confidence 4789999999999999999999999999999874 58888888653 1 00 01 11
Q ss_pred -------------CcCCCe----EEEE-eCCCccCceEecCCCCHHHHHHHHHHHhc
Q 023747 218 -------------VEEYPT----LLFY-PAGDKANPIKVSARSSSKNIAAFIKEQLK 256 (278)
Q Consensus 218 -------------i~~~Pt----l~~f-~~g~~~~~~~~~g~~~~~~l~~~i~~~~~ 256 (278)
...+|+ .+++ ++|+-+. .+.|..+.+.+.+.|.+.+.
T Consensus 116 ~~~~~~~~~~~~~~~~~p~~~~~~~lid~~G~i~~--~~~g~~~~~~l~~~i~~lL~ 170 (180)
T 3kij_A 116 SEGEPAFRFLVDSSKKEPRWNFWKYLVNPEGQVVK--FWRPEEPIEVIRPDIAALVR 170 (180)
T ss_dssp TTCCHHHHHHHHHHTCCCSSTTCEEEECTTSCEEE--EECTTCCGGGTHHHHHHHHH
T ss_pred ccccHHHHHHHhcCCCCccccceEEEECCCCCEEE--EECCCCCHHHHHHHHHHHHH
Confidence 112676 5555 5555433 67888888777777777664
No 347
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=98.50 E-value=2.6e-07 Score=71.03 Aligned_cols=86 Identities=9% Similarity=0.088 Sum_probs=62.5
Q ss_pred CC-cEEEEEE-CCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCC-----------------------C-CC-CCCCC
Q 023747 166 HK-DVLLEVY-TPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA-----------------------N-EH-PKLQV 218 (278)
Q Consensus 166 ~~-~~~v~f~-~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~-----------------------~-~~-~~~~i 218 (278)
++ +++|.|| ++||++|....+.+.+++..++.. ++.+..|+++. + .+ ..|++
T Consensus 35 gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~-~~~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v 113 (160)
T 1xvw_A 35 GAKNVLLVFFPLAFTGICQGELDQLRDHLPEFEND-DSAALAISVGPPPTHKIWATQSGFTFPLLSDFWPHGAVSQAYGV 113 (160)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSS-SEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTTTTHHHHHTTC
T ss_pred CCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHC-CcEEEEEeCCCHHHHHHHHHhcCCCceEEecCCcChHHHHHcCC
Confidence 45 8999998 999999999999999999999753 58888888763 2 23 36788
Q ss_pred c----CCC--eEEEEeCCCccCceEecCCC----CHHHHHHHHHH
Q 023747 219 E----EYP--TLLFYPAGDKANPIKVSARS----SSKNIAAFIKE 253 (278)
Q Consensus 219 ~----~~P--tl~~f~~g~~~~~~~~~g~~----~~~~l~~~i~~ 253 (278)
. ++| +.+++..++.+ ...+.|.. ..+.+.+.|++
T Consensus 114 ~~~~~~~p~~~~~lid~~G~i-~~~~~g~~~~~~~~~~l~~~l~~ 157 (160)
T 1xvw_A 114 FNEQAGIANRGTFVVDRSGII-RFAEMKQPGEVRDQRLWTDALAA 157 (160)
T ss_dssp EETTTTEECSEEEEECTTSBE-EEEEECCTTCCCCHHHHHHHHHH
T ss_pred ccccCCCeeeeEEEECCCCeE-EEEEecCCCCCCCHHHHHHHHHH
Confidence 7 889 77777444433 22555543 45677777654
No 348
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=98.45 E-value=1.6e-06 Score=67.18 Aligned_cols=92 Identities=10% Similarity=0.095 Sum_probs=73.1
Q ss_pred CCceEEEEEeCc-cc-hHHHHHHHHHHHHHhc-----CceEEEEEeCCCcc-------------------------cchh
Q 023747 37 DTLDMVYVFAKA-DD-LKSLLEPLEDIARNFK-----GKIMFTAVDIADED-------------------------LAKP 84 (278)
Q Consensus 37 ~~~~~v~F~~~~-~~-c~~~~~~~~~la~~~~-----~~v~f~~vd~~~~~-------------------------~~~~ 84 (278)
+++++|.||++| ++ |....|.+.+++++|+ ..+.|+.|+++... ....
T Consensus 26 gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 105 (171)
T 2rli_A 26 GQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQDFHPRLLGLTGSTKQVAQ 105 (171)
T ss_dssp TSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHHHTTCTTCCEEECCHHHHHH
T ss_pred CCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHHH
Confidence 578999999999 87 9999999999999995 35999888887321 0126
Q ss_pred HHHHcCCCCCCc---------------eEEEEecCCcceeecCCCCCChHHHHHHHHHHhc
Q 023747 85 FLTLFGLEESKN---------------TVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLH 130 (278)
Q Consensus 85 l~~~~~i~~~~P---------------tl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 130 (278)
+++.|||... | ++ .+++..+...+.+.|..+.+++.+.++.++.
T Consensus 106 ~~~~~~v~~~-p~~~~~~~~~~~~~~~~~-~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 164 (171)
T 2rli_A 106 ASHSYRVYYN-AGPKDEDQDYIVDHSIAI-YLLNPDGLFTDYYGRSRSAEQISDSVRRHMA 164 (171)
T ss_dssp HHHHSCCCCE-ECCCCSSCCCCEECCCEE-EEECTTSCEEEEEESSCCHHHHHHHHHHHHH
T ss_pred HHHHhCeEEE-ecCCCCCCCeEEeccceE-EEECCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 8889999887 7 77 6666555566667888999999999998774
No 349
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=98.45 E-value=5.6e-07 Score=71.93 Aligned_cols=89 Identities=13% Similarity=0.126 Sum_probs=67.0
Q ss_pred CCCcEEEEEE-CCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-----------------------------CC-
Q 023747 165 SHKDVLLEVY-TPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-----------------------------EH- 213 (278)
Q Consensus 165 ~~~~~~v~f~-~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-----------------------------~~- 213 (278)
.+++++|.|| ++||++|....+.+.+++..|+.. ++.+..|+++.. ++
T Consensus 33 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~-~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~ 111 (197)
T 1qmv_A 33 KGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKL-GCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRLS 111 (197)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTT-TEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTCHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHHHHHHhhCCCCCCceEEEECCcHHHH
Confidence 3688999999 999999999999999999999753 588888888741 11
Q ss_pred CCCCCc------CCCeEEEEeCCCccCceEecC----CCCHHHHHHHHHHHh
Q 023747 214 PKLQVE------EYPTLLFYPAGDKANPIKVSA----RSSSKNIAAFIKEQL 255 (278)
Q Consensus 214 ~~~~i~------~~Ptl~~f~~g~~~~~~~~~g----~~~~~~l~~~i~~~~ 255 (278)
..|++. .+|+.+++..++.+ ...+.| ..+.+++.++|+...
T Consensus 112 ~~~gv~~~~~~~~~P~~~lid~~G~i-~~~~~g~~~~~~~~~e~l~~l~~l~ 162 (197)
T 1qmv_A 112 EDYGVLKTDEGIAYRGLFIIDGKGVL-RQITVNDLPVGRSVDEALRLVQAFQ 162 (197)
T ss_dssp HHTTCEETTTTEECEEEEEECTTSBE-EEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHcCCccCCCCceeeEEEEECCCCcE-EEEEeCCCCCCCCHHHHHHHHHhcc
Confidence 245676 79999998554444 223444 356789999998765
No 350
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=98.44 E-value=9e-07 Score=69.99 Aligned_cols=88 Identities=8% Similarity=-0.039 Sum_probs=63.3
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCC----C-C----C----CCC---------------
Q 023747 165 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA----N-E----H----PKL--------------- 216 (278)
Q Consensus 165 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~----~-~----~----~~~--------------- 216 (278)
.+++++|.||++||++|....|.+.++..+++.. ++.+..|+++. . + + .++
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~-~v~vv~is~d~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 126 (185)
T 2gs3_A 48 RGFVCIVTNVASQGGKTEVNYTQLVDLHARYAEC-GLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNGD 126 (185)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG-TEEEEEEECCTTTTCCCSCHHHHHHHHHHTTCCSEEBCCCBSSST
T ss_pred CCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcC-CeEEEEEECcccCCCCCCCHHHHHHHHHHcCCCCeeeeeeccCCh
Confidence 3689999999999999999999999999999763 48888888752 0 0 0 000
Q ss_pred ----------------C-----CcCCCeEEEEeCCCccCceEecCCCCHHHHHHHHHHH
Q 023747 217 ----------------Q-----VEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQ 254 (278)
Q Consensus 217 ----------------~-----i~~~Ptl~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~ 254 (278)
+ +..+|+.+++...+++ ..++.|..+.+.|.+.|++.
T Consensus 127 ~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i-~~~~~g~~~~~~l~~~i~~l 184 (185)
T 2gs3_A 127 DAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCV-VKRYGPMEEPLVIEKDLPHY 184 (185)
T ss_dssp TBCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECTTSCE-EEEECTTSCGGGGGGGHHHH
T ss_pred hhhHHHHHHHhhcccccccCCcccccceEEEECCCCCE-EEeeCCCCCHHHHHHHHHHh
Confidence 1 1225888888544433 23678888888888877664
No 351
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=98.44 E-value=1.3e-06 Score=67.83 Aligned_cols=68 Identities=9% Similarity=0.126 Sum_probs=57.1
Q ss_pred cCCceEEEEEeCc-cchHHHHHHHHHHHHHhcC--ceEEEEEeCCCccc---------------------chhHHHHcCC
Q 023747 36 IDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKG--KIMFTAVDIADEDL---------------------AKPFLTLFGL 91 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~--~v~f~~vd~~~~~~---------------------~~~l~~~~~i 91 (278)
.+++++|.||++| ++|+...|.+.+++++|++ .+.|+.|+++.... ...+++.|+|
T Consensus 47 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 126 (165)
T 3s9f_A 47 SGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALTKKYSV 126 (165)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHHHHcCC
Confidence 4578999999999 9999999999999999985 68888888876521 1479999999
Q ss_pred CCCCceEEEEecCC
Q 023747 92 EESKNTVVTAFDNK 105 (278)
Q Consensus 92 ~~~~Ptl~~~~~~~ 105 (278)
.++ |++ .+++..
T Consensus 127 ~~~-Pt~-~lid~~ 138 (165)
T 3s9f_A 127 ESI-PTL-IGLNAD 138 (165)
T ss_dssp CSS-SEE-EEEETT
T ss_pred CCC-CEE-EEEeCC
Confidence 999 999 777743
No 352
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=98.43 E-value=1.1e-06 Score=67.67 Aligned_cols=92 Identities=9% Similarity=0.030 Sum_probs=73.0
Q ss_pred CCceEEEEEeCc-cc-hHHHHHHHHHHHHHhcC-----ceEEEEEeCCCcc-------------------------cchh
Q 023747 37 DTLDMVYVFAKA-DD-LKSLLEPLEDIARNFKG-----KIMFTAVDIADED-------------------------LAKP 84 (278)
Q Consensus 37 ~~~~~v~F~~~~-~~-c~~~~~~~~~la~~~~~-----~v~f~~vd~~~~~-------------------------~~~~ 84 (278)
+++++|.||++| ++ |....|.+.++++++++ .+.++.|+++... ....
T Consensus 23 gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~~ 102 (164)
T 2ggt_A 23 GQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTREEVDQ 102 (164)
T ss_dssp TCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHHTTCSSCEEEECCHHHHHH
T ss_pred CCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHHH
Confidence 578999999999 87 99999999999999963 6888888887521 1124
Q ss_pred HHHHcCCCCCCc---------------eEEEEecCCcceeecCCCCCChHHHHHHHHHHhc
Q 023747 85 FLTLFGLEESKN---------------TVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLH 130 (278)
Q Consensus 85 l~~~~~i~~~~P---------------tl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 130 (278)
+++.|||... | ++ .+++..+...+.+.|..+.++|.+.+++.+.
T Consensus 103 ~~~~~~v~~~-p~~~~~~~~~~~~~~~~~-~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 161 (164)
T 2ggt_A 103 VARAYRVYYS-PGPKDEDEDYIVDHTIIM-YLIGPDGEFLDYFGQNKRKGEIAASIATHMR 161 (164)
T ss_dssp HHHTTTCCEE-EEEECTTSCEEEEECCEE-EEECTTSCEEEEEETTCCHHHHHHHHHHHHG
T ss_pred HHHhcCeEEE-ecCCCCCCCeeEeccceE-EEECCCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence 8889999988 8 66 6666555566667888899999999998763
No 353
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=98.42 E-value=1.1e-06 Score=66.29 Aligned_cols=86 Identities=10% Similarity=0.235 Sum_probs=65.4
Q ss_pred cCCceEEEEEeCc-cchHHHHHHHHHHHHHhcC-ceEEEEEeCCCccc-----------------------chhHHHHcC
Q 023747 36 IDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKG-KIMFTAVDIADEDL-----------------------AKPFLTLFG 90 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~-~v~f~~vd~~~~~~-----------------------~~~l~~~~~ 90 (278)
.+++++|.||++| ++|....|.+.+++++|++ .+.|+.|+.+.... ...+++.|+
T Consensus 31 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 110 (143)
T 4fo5_A 31 LGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELYKKYD 110 (143)
T ss_dssp SCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHHHHTT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchHHHHHcC
Confidence 3478999999999 9999999999999999985 48998888874310 136889999
Q ss_pred CCCCCceEEEEecCCcceeecCCCCCChHHHHHHHH
Q 023747 91 LEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCS 126 (278)
Q Consensus 91 i~~~~Ptl~~~~~~~~~~~~~~~g~~~~~~i~~fi~ 126 (278)
|.+. |+. .+++..+...+. ..+.+++.++++
T Consensus 111 v~~~-P~~-~lid~~G~i~~~---~~~~~~l~~~l~ 141 (143)
T 4fo5_A 111 LRKG-FKN-FLINDEGVIIAA---NVTPEKLTEILK 141 (143)
T ss_dssp GGGC-CCE-EEECTTSBEEEE---SCCHHHHHHHHT
T ss_pred CCCC-CcE-EEECCCCEEEEc---cCCHHHHHHHHH
Confidence 9999 999 677754444432 345677777664
No 354
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=98.41 E-value=1.4e-06 Score=67.71 Aligned_cols=91 Identities=13% Similarity=0.172 Sum_probs=66.9
Q ss_pred CCCcEEEEEECCCCh-hHHHHHHHHHHHHHHhcCCC-ceEEEEEeCCCC-C----C----CC------------------
Q 023747 165 SHKDVLLEVYTPWCV-TCETTSKQIEKLAKHFKGLD-NLVIAKIDASAN-E----H----PK------------------ 215 (278)
Q Consensus 165 ~~~~~~v~f~~~~c~-~c~~~~~~~~~~a~~~~~~~-~~~~~~vd~~~~-~----~----~~------------------ 215 (278)
.+++++|.||++||+ +|....+.+.++...+.... ++.++.|+++.. + + .+
T Consensus 32 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~~~~~~~~~~~~~~~~~l~d~~~~~ 111 (174)
T 1xzo_A 32 KGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQLKKFAANYPLSFDNWDFLTGYSQSE 111 (174)
T ss_dssp TTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTSCCCGGGEEEEBCSCHHH
T ss_pred CCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCCcceEEEeCCCHHH
Confidence 378999999999999 99999999999999987543 488888887631 0 0 01
Q ss_pred -------------------CCCcCCCeEEEEeCCCccCceEecCCC--CHHHHHHHHHHHhc
Q 023747 216 -------------------LQVEEYPTLLFYPAGDKANPIKVSARS--SSKNIAAFIKEQLK 256 (278)
Q Consensus 216 -------------------~~i~~~Ptl~~f~~g~~~~~~~~~g~~--~~~~l~~~i~~~~~ 256 (278)
+++...|+.+++...+.+ ...+.|.. +.+.|.+.|++.+.
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i-~~~~~g~~~~~~~~l~~~l~~ll~ 172 (174)
T 1xzo_A 112 IEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKV-LKDYNGVENTPYDDIISDVKSAST 172 (174)
T ss_dssp HHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEE-EEEEESSSSCCHHHHHHHHHHHTC
T ss_pred HHHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeE-EEEEcCCCCCCHHHHHHHHHHHHh
Confidence 234567888888554444 23566764 58999999988775
No 355
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=98.41 E-value=9.1e-07 Score=65.38 Aligned_cols=95 Identities=6% Similarity=0.164 Sum_probs=75.1
Q ss_pred CeEEEc-ccchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCC-CCCCCcCCCeEEE
Q 023747 149 NVQIVV-GKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASANEH-PKLQVEEYPTLLF 226 (278)
Q Consensus 149 ~v~~l~-~~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~~~-~~~~i~~~Ptl~~ 226 (278)
.+..|+ .+++.+++ +.++.++|-|+++||++| .+.|.++|..+ . ++.|+.++. .++ .++++. .|++++
T Consensus 22 ~~~~i~s~~e~e~fi-~~~~v~VVGfF~~~~~~~---~~~F~~~A~~~-~--d~~F~~t~~--~~v~~~~~v~-~~~vvl 91 (124)
T 2l4c_A 22 EPTWLTDVPAAMEFI-AATEVAVIGFFQDLEIPA---VPILHSMVQKF-P--GVSFGISTD--SEVLTHYNIT-GNTICL 91 (124)
T ss_dssp CCEECCSHHHHHHHH-HTSSEEEEEECSCTTSTH---HHHHHHHHHHC-T--TSEEEEECC--HHHHHHTTCC-SSCEEE
T ss_pred cceEcCCHHHHHHHH-hcCCCEEEEEECCCCChh---HHHHHHHHHhC-C--CceEEEECh--HHHHHHcCCC-CCeEEE
Confidence 345564 47788877 557889999999999999 56899999999 4 689988863 234 577877 899999
Q ss_pred EeCCCccCceEecC----CCCHHHHHHHHHHH
Q 023747 227 YPAGDKANPIKVSA----RSSSKNIAAFIKEQ 254 (278)
Q Consensus 227 f~~g~~~~~~~~~g----~~~~~~l~~~i~~~ 254 (278)
|++.... ...|.| ..+.++|.+||..+
T Consensus 92 fkkfde~-~~~~~g~~~~~~~~~~L~~FI~~n 122 (124)
T 2l4c_A 92 FRLVDNE-QLNLEDEDIESIDATKLSRFIEIN 122 (124)
T ss_dssp EETTTTE-EEEECHHHHTTCCHHHHHHHHHHH
T ss_pred EEcCCCC-ceeecCcccCCCCHHHHHHHHHHh
Confidence 9987543 557886 68999999999876
No 356
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=98.37 E-value=2e-06 Score=66.94 Aligned_cols=92 Identities=15% Similarity=0.126 Sum_probs=68.4
Q ss_pred cCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCc-eEEEEEeCCC--------cccchhHH-------------------
Q 023747 36 IDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGK-IMFTAVDIAD--------EDLAKPFL------------------- 86 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~-v~f~~vd~~~--------~~~~~~l~------------------- 86 (278)
.+++++|.||++| ++|+ ..|.+.+++++|++. +.++.|+++. .....+++
T Consensus 31 ~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~d~~~~~~~~~~~~~~~~~p~~~d~d~~~~ 109 (171)
T 3cmi_A 31 KGKVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCNQFGHQEPGSDEEIAQFCQLNYGVTFPIMKKIDVNGG 109 (171)
T ss_dssp TTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEECSCC------------------CCCSCBBCCCBSSST
T ss_pred CCCEEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCceEEeeccCCCc
Confidence 4578999999999 9999 999999999999875 8898887641 00001222
Q ss_pred -----------HHcCCCCCCc------eEEEEecCCcceeecCCCCCChHHHHHHHHHHhc
Q 023747 87 -----------TLFGLEESKN------TVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLH 130 (278)
Q Consensus 87 -----------~~~~i~~~~P------tl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 130 (278)
+.|++.+. | +. .+++..+...+.+.|..+.+.+.+.+++++.
T Consensus 110 ~~~~~~~~~~~~~~~v~~~-P~i~~~~~~-~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 168 (171)
T 3cmi_A 110 NEDPVYKFLKSQKSGMLGL-RGIKWNFEK-FLVDKKGKVYERYSSLTKPSSLSETIEELLK 168 (171)
T ss_dssp TBCHHHHHHHHHSCCSSSC-CSCCSTTCE-EEECSSSCEEEEECTTSCGGGGHHHHHHHHT
T ss_pred cchHHHHHHHhccCCcCCC-CcccccceE-EEECCCCCEEEEeCCCCCHHHHHHHHHHHHH
Confidence 24678888 9 77 6666555566777888899999999998874
No 357
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=98.35 E-value=8.3e-07 Score=71.28 Aligned_cols=88 Identities=14% Similarity=0.133 Sum_probs=66.6
Q ss_pred CCcEEEEEE-CCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-----------------------------CC-C
Q 023747 166 HKDVLLEVY-TPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-----------------------------EH-P 214 (278)
Q Consensus 166 ~~~~~v~f~-~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-----------------------------~~-~ 214 (278)
+++++|.|| ++||++|....+.+.+++.+|+.. ++.+..|+++.. ++ .
T Consensus 36 gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~-~v~vi~Is~D~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~ 114 (202)
T 1uul_A 36 GKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDI-GCEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADKTKCIMK 114 (202)
T ss_dssp TSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTT-TEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTCHHHH
T ss_pred CCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHHHhhCCCCCCceeEEECCchHHHH
Confidence 689999999 999999999999999999999753 588888888641 11 1
Q ss_pred CCCCc------CCCeEEEEeCCCccCceEecC----CCCHHHHHHHHHHHh
Q 023747 215 KLQVE------EYPTLLFYPAGDKANPIKVSA----RSSSKNIAAFIKEQL 255 (278)
Q Consensus 215 ~~~i~------~~Ptl~~f~~g~~~~~~~~~g----~~~~~~l~~~i~~~~ 255 (278)
.|++. .+|+++++..++.+ ...+.| ..+.+++.+.|+...
T Consensus 115 ~ygv~~~~~g~~~P~~~lid~~G~i-~~~~~g~~~~~~~~~ell~~l~~l~ 164 (202)
T 1uul_A 115 SYGVLKEEDGVAYRGLFIIDPKQNL-RQITVNDLPVGRDVDEALRLVKAFQ 164 (202)
T ss_dssp HHTCEETTTTEECEEEEEECTTSBE-EEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HcCCccCCCCceeeEEEEECCCCEE-EEEEeCCCCCCCCHHHHHHHHHHhh
Confidence 34777 89999999554444 223333 356789999888765
No 358
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.34 E-value=4.7e-07 Score=73.64 Aligned_cols=80 Identities=16% Similarity=0.286 Sum_probs=58.0
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCC-----------------------------------
Q 023747 165 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDAS----------------------------------- 209 (278)
Q Consensus 165 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~----------------------------------- 209 (278)
+++.+++.||++||++|+.+.+.+.++... ++.+..+...
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~-----~v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~ 159 (216)
T 1eej_A 85 QEKHVITVFTDITCGYCHKLHEQMADYNAL-----GITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKSVA 159 (216)
T ss_dssp TCCEEEEEEECTTCHHHHHHHTTHHHHHHT-----TEEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHTTCCCC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHhC-----CcEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHhCCCCC
Confidence 367899999999999999999999988752 2444443321
Q ss_pred -----CC-----CC-CCCCCcCCCeEEEEeCCCccCceEecCCCCHHHHHHHHHHHh
Q 023747 210 -----AN-----EH-PKLQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQL 255 (278)
Q Consensus 210 -----~~-----~~-~~~~i~~~Ptl~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~ 255 (278)
.. .+ .+++|.++|+++ +.+|. .+.|..+.+.|.++|.+..
T Consensus 160 ~~~~~~~v~~~~~l~~~~gV~gtPt~v-~~dG~-----~~~G~~~~~~l~~~l~~~~ 210 (216)
T 1eej_A 160 PASCDVDIADHYALGVQLGVSGTPAVV-LSNGT-----LVPGYQPPKEMKEFLDEHQ 210 (216)
T ss_dssp CCCCSCCHHHHHHHHHHHTCCSSSEEE-CTTSC-----EEESCCCHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHcCCCccCEEE-EcCCe-----EecCCCCHHHHHHHHHHhh
Confidence 11 11 245899999994 55553 4678889999999998764
No 359
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.34 E-value=7.4e-07 Score=69.71 Aligned_cols=81 Identities=12% Similarity=0.188 Sum_probs=61.7
Q ss_pred CCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCC-----------------------------------
Q 023747 166 HKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA----------------------------------- 210 (278)
Q Consensus 166 ~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~----------------------------------- 210 (278)
.+..++.|+++||++|+.+.+.+.++...+. ++.+...+..-
T Consensus 22 a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~---~v~~~~~~~p~~~~~s~~aa~~~~~a~~~~~~~~~~~~lf~~~~~~ 98 (175)
T 3gyk_A 22 GDVTVVEFFDYNCPYCRRAMAEVQGLVDADP---NVRLVYREWPILGEGSDFAARAALAARQQGKYEAFHWALMGMSGKA 98 (175)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHHCT---TEEEEEEECCCSCHHHHHHHHHHHHGGGGTCHHHHHHHHHTCSSCC
T ss_pred CCEEEEEEECCCCccHHHHHHHHHHHHHhCC---CEEEEEEeCCCCCCChHHHHHHHHHHHHHhHHHHHHHHHHhcCCCC
Confidence 5678999999999999999999999988864 35555555321
Q ss_pred ----------------------------------C-CC-CCCCCcCCCeEEEEeCCCccCceEecCCCCHHHHHHHHHHH
Q 023747 211 ----------------------------------N-EH-PKLQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQ 254 (278)
Q Consensus 211 ----------------------------------~-~~-~~~~i~~~Ptl~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~ 254 (278)
+ .. .+++|.++|++++ +|+ .+.|..+.+.|.++|.+.
T Consensus 99 ~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gtPt~~i--~g~-----~~~G~~~~~~l~~~i~~~ 171 (175)
T 3gyk_A 99 NETGVLRIAREVGLDTEQLQRDMEAPEVTAHIAQSMALAQKLGFNGTPSFVV--EDA-----LVPGFVEQSQLQDAVDRA 171 (175)
T ss_dssp SHHHHHHHHHHTTCCHHHHHHHTTCHHHHHHHHHHHHHHHHHTCCSSSEEEE--TTE-----EECSCCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCHHHHHHHHhChHHHHHHHHHHHHHHHcCCccCCEEEE--CCE-----EeeCCCCHHHHHHHHHHH
Confidence 0 01 2458999999987 552 567999999999999876
Q ss_pred hc
Q 023747 255 LK 256 (278)
Q Consensus 255 ~~ 256 (278)
+.
T Consensus 172 l~ 173 (175)
T 3gyk_A 172 RK 173 (175)
T ss_dssp HH
T ss_pred Hh
Confidence 64
No 360
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.33 E-value=3.6e-06 Score=64.83 Aligned_cols=91 Identities=13% Similarity=0.145 Sum_probs=67.2
Q ss_pred cCCceEEEEE-eCc-cchHHHHHHHHHHHHHhcCc-eEEEEEeCCCcc------------------cchhHHHHcCCCC-
Q 023747 36 IDTLDMVYVF-AKA-DDLKSLLEPLEDIARNFKGK-IMFTAVDIADED------------------LAKPFLTLFGLEE- 93 (278)
Q Consensus 36 ~~~~~~v~F~-~~~-~~c~~~~~~~~~la~~~~~~-v~f~~vd~~~~~------------------~~~~l~~~~~i~~- 93 (278)
++.++++.|| ++| ++|....|.+.+++++|++. +.|+.|+.+... ....+++.||+.+
T Consensus 28 gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 107 (161)
T 3drn_A 28 GKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSDDINSHKRFKEKYKLPFILVSDPDKKIRELYGAKGF 107 (161)
T ss_dssp TTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESCCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCCCS
T ss_pred CCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHcCCCCc
Confidence 3333899999 999 99999999999999999865 899998887210 0168999999999
Q ss_pred ---CCceEEEEecCCcceeecCCCC----CChHHHHHHHHHH
Q 023747 94 ---SKNTVVTAFDNKAISKFLLESD----LTPSNIEEFCSRL 128 (278)
Q Consensus 94 ---~~Ptl~~~~~~~~~~~~~~~g~----~~~~~i~~fi~~~ 128 (278)
. |+. .+++.++...+.+.|. ...+++.+.++++
T Consensus 108 ~~~~-P~~-~lid~~G~i~~~~~g~~~~~~~~~~il~~l~~l 147 (161)
T 3drn_A 108 ILPA-RIT-FVIDKKGIIRHIYNSQMNPANHVNEALKALKQI 147 (161)
T ss_dssp SSCC-CEE-EEECTTSBEEEEEECSSCTTHHHHHHHHHHHHH
T ss_pred Cccc-ceE-EEECCCCEEEEEEecCCCCCcCHHHHHHHHHHh
Confidence 8 999 7777655556656663 2344555555554
No 361
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=98.33 E-value=3.1e-06 Score=65.48 Aligned_cols=93 Identities=13% Similarity=0.171 Sum_probs=69.7
Q ss_pred cCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCc-eEEEEEeCCC--------cccchhHHH-Hc---------------
Q 023747 36 IDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGK-IMFTAVDIAD--------EDLAKPFLT-LF--------------- 89 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~-v~f~~vd~~~--------~~~~~~l~~-~~--------------- 89 (278)
.+++++|.||++| ++|....|.+.+++++|+++ +.++.|+++. .....++++ ++
T Consensus 31 ~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 110 (170)
T 2p5q_A 31 KGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEEPGTNDQITDFVCTRFKSEFPIFDKIDVNGE 110 (170)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHHHHTCCCSCBBCCCBSSST
T ss_pred CCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEECCCCCCCCCCCHHHHHHHHHHhcCCCceeEeeeccCCC
Confidence 4578999999999 99999999999999999876 9999998863 100122333 33
Q ss_pred --------------CC--CCCCc---eEEEEecCCcceeecCCCCCChHHHHHHHHHHhc
Q 023747 90 --------------GL--EESKN---TVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLH 130 (278)
Q Consensus 90 --------------~i--~~~~P---tl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 130 (278)
++ .++ | +. .+++..+...+.+.|..+.+++.+.++++++
T Consensus 111 ~~~~~~~~l~~~~~~~~~~~~-p~~~~~-~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 168 (170)
T 2p5q_A 111 NASPLYRFLKLGKWGIFGDDI-QWNFAK-FLVNKDGQVVDRYYPTTSPLSLERDIKQLLE 168 (170)
T ss_dssp TBCHHHHHHHTHHHHTTCSCC-CSTTCE-EEECTTSCEEEEECTTSCGGGGHHHHHHHTT
T ss_pred chHHHHHHHHhcCCCccCCcc-cccccE-EEECCCCCEEEeeCCCCCHHHHHHHHHHHhh
Confidence 34 455 7 77 6666555566667888889999999998764
No 362
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=98.32 E-value=4.8e-06 Score=66.05 Aligned_cols=93 Identities=18% Similarity=0.188 Sum_probs=70.6
Q ss_pred cCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCc-eEEEEEeCCC--------cccchhHH-HH----------------
Q 023747 36 IDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGK-IMFTAVDIAD--------EDLAKPFL-TL---------------- 88 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~-v~f~~vd~~~--------~~~~~~l~-~~---------------- 88 (278)
.+++++|.||++| ++|....|.+.+++++|+++ +.++.|+++. .....+++ ++
T Consensus 47 ~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~D~~~~ 126 (190)
T 2vup_A 47 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNGE 126 (190)
T ss_dssp TTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCBSSST
T ss_pred CCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCccCCCCCCCHHHHHHHHHHhcCCCeEEEeecccCcc
Confidence 4578999999999 99999999999999999875 9999998873 10011233 22
Q ss_pred -------------cCCCCCCc------eEEEEecCCcceeecCCCCCChHHHHHHHHHHhc
Q 023747 89 -------------FGLEESKN------TVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLH 130 (278)
Q Consensus 89 -------------~~i~~~~P------tl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 130 (278)
+++.+. | +. .+++..+...+.+.|..+.+.+.+.+++.+.
T Consensus 127 ~~~~~~~~l~~~~~~v~~~-P~i~~~~~~-~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 185 (190)
T 2vup_A 127 NAHPLYEYMKKTKPGILKT-KAIKWNFTS-FLIDRDGVPVERFSPGASVKDIEKKLIPLLE 185 (190)
T ss_dssp TBCHHHHHHHHHSCCGGGC-CSCCSTTCE-EEECTTSCEEEEECTTCCHHHHHHHHHHHHH
T ss_pred cccHHHHHHHhhcCCcCCC-ccccccceE-EEECCCCcEEEEECCCCCHHHHHHHHHHHHh
Confidence 366777 8 77 5666555566667888899999999999875
No 363
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=98.31 E-value=1.4e-06 Score=71.00 Aligned_cols=89 Identities=13% Similarity=0.140 Sum_probs=67.0
Q ss_pred CCcEEEEEE-CCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-----------------------------CC-C
Q 023747 166 HKDVLLEVY-TPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-----------------------------EH-P 214 (278)
Q Consensus 166 ~~~~~v~f~-~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-----------------------------~~-~ 214 (278)
+++++|.|| ++||++|....+.+.+++.+|+.. ++.+..|+++.. ++ .
T Consensus 56 Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~-~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~i~~ 134 (220)
T 1zye_A 56 GKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDV-NCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISR 134 (220)
T ss_dssp TSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHT-TEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHHHHHHHhCCCcCCceEEEECCcHHHHH
Confidence 589999999 999999999999999999999643 588888887641 11 2
Q ss_pred CCCCc------CCCeEEEEeCCCccCceEecC----CCCHHHHHHHHHHHhc
Q 023747 215 KLQVE------EYPTLLFYPAGDKANPIKVSA----RSSSKNIAAFIKEQLK 256 (278)
Q Consensus 215 ~~~i~------~~Ptl~~f~~g~~~~~~~~~g----~~~~~~l~~~i~~~~~ 256 (278)
.|++. .+|+++++...+.+ ...+.| ..+.+++.+.|+....
T Consensus 135 ~ygv~~~~~g~~~P~~~liD~~G~I-~~~~~g~~~~~~~~~ell~~l~~l~~ 185 (220)
T 1zye_A 135 DYGVLLEGPGLALRGLFIIDPNGVI-KHLSVNDLPVGRSVEETLRLVKAFQF 185 (220)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBE-EEEEEECTTCCCCHHHHHHHHHHHHH
T ss_pred HhCCeecCCCcccceEEEECCCCEE-EEEEecCCCCCCCHHHHHHHHHHhhh
Confidence 45777 89999999544444 123334 3577899999987663
No 364
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.30 E-value=2.7e-06 Score=67.75 Aligned_cols=93 Identities=11% Similarity=0.165 Sum_probs=72.8
Q ss_pred CCceEEEEE-eCc-cchHHHHHHHHHHHHHhcC-ceEEEEEeCCCc----------------------ccchhHHHHcCC
Q 023747 37 DTLDMVYVF-AKA-DDLKSLLEPLEDIARNFKG-KIMFTAVDIADE----------------------DLAKPFLTLFGL 91 (278)
Q Consensus 37 ~~~~~v~F~-~~~-~~c~~~~~~~~~la~~~~~-~v~f~~vd~~~~----------------------~~~~~l~~~~~i 91 (278)
+++++|.|| ++| ++|....|.+.+++++|++ .+.|+.|+.+.. +....+++.|++
T Consensus 45 gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 124 (195)
T 2bmx_A 45 GKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAAGV 124 (195)
T ss_dssp TCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHHTC
T ss_pred CCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHHHhCC
Confidence 468999999 999 9999999999999999986 489998888641 002578899999
Q ss_pred C-----CCCceEEEEecCCcceeecCCCC----CChHHHHHHHHHHhcC
Q 023747 92 E-----ESKNTVVTAFDNKAISKFLLESD----LTPSNIEEFCSRLLHG 131 (278)
Q Consensus 92 ~-----~~~Ptl~~~~~~~~~~~~~~~g~----~~~~~i~~fi~~~~~~ 131 (278)
. +. |++ .+++..+...+.+.|. .+.+++.+.++.+..+
T Consensus 125 ~~~~g~~~-P~~-~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~~ 171 (195)
T 2bmx_A 125 LNADGVAD-RVT-FIVDPNNEIQFVSATAGSVGRNVDEVLRVLDALQSD 171 (195)
T ss_dssp BCTTSSBC-EEE-EEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHHC-
T ss_pred cccCCCcc-ceE-EEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHHhhC
Confidence 9 88 999 7776555555555444 3789999999988754
No 365
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=98.30 E-value=1.1e-06 Score=69.79 Aligned_cols=89 Identities=16% Similarity=0.195 Sum_probs=66.3
Q ss_pred CCCcEEEEEE-CCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-----------------------------CC-
Q 023747 165 SHKDVLLEVY-TPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-----------------------------EH- 213 (278)
Q Consensus 165 ~~~~~~v~f~-~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-----------------------------~~- 213 (278)
.+++++|.|| ++||++|....+.+.+++.+|+.. ++.+..|+++.. ++
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~-~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~ 108 (192)
T 2h01_A 30 GKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKER-NVELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDISKSIA 108 (192)
T ss_dssp TTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHT-TEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC-CCEEEEEEeCCHHHHHHHHHhHHhhCCccCCCcCeEECCcHHHH
Confidence 4679999999 999999999999999999999643 588888887631 11
Q ss_pred CCCCCc-----CCCeEEEEeCCCccCceEecCC----CCHHHHHHHHHHHh
Q 023747 214 PKLQVE-----EYPTLLFYPAGDKANPIKVSAR----SSSKNIAAFIKEQL 255 (278)
Q Consensus 214 ~~~~i~-----~~Ptl~~f~~g~~~~~~~~~g~----~~~~~l~~~i~~~~ 255 (278)
..|++. .+|+++++..++.+ ...+.|. .+.+++.+.|+...
T Consensus 109 ~~~gv~~~~g~~~P~~~liD~~G~i-~~~~~g~~~~~~~~~~l~~~l~~l~ 158 (192)
T 2h01_A 109 RSYDVLFNESVALRAFVLIDKQGVV-QHLLVNNLALGRSVDEILRLIDALQ 158 (192)
T ss_dssp HHTTCEETTTEECCEEEEECTTSBE-EEEEEGGGSSGGGHHHHHHHHHHHH
T ss_pred HHhCCcCcCCceeeEEEEEcCCCEE-EEEEeCCCCCCCCHHHHHHHHHHHh
Confidence 245787 89999999544444 2234442 45788888887665
No 366
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=98.28 E-value=1.8e-06 Score=69.98 Aligned_cols=89 Identities=15% Similarity=0.183 Sum_probs=65.8
Q ss_pred CCCcEEEEEE-CCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-----------------------------CC-
Q 023747 165 SHKDVLLEVY-TPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-----------------------------EH- 213 (278)
Q Consensus 165 ~~~~~~v~f~-~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-----------------------------~~- 213 (278)
.+++++|.|| ++||++|....+.+.+++.+|+.. ++.+..|+++.. ++
T Consensus 51 ~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~-~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~ 129 (213)
T 2i81_A 51 GKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHER-NVELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSDITKSIS 129 (213)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHT-TEEEEEEESSCHHHHHHHHSSCGGGTCCCSCSSEEEECTTSHHH
T ss_pred CCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHHHhhCCccCCCceEEECCchHHH
Confidence 4678999999 999999999999999999999643 588888887641 11
Q ss_pred CCCCCc-----CCCeEEEEeCCCccCceEecCC----CCHHHHHHHHHHHh
Q 023747 214 PKLQVE-----EYPTLLFYPAGDKANPIKVSAR----SSSKNIAAFIKEQL 255 (278)
Q Consensus 214 ~~~~i~-----~~Ptl~~f~~g~~~~~~~~~g~----~~~~~l~~~i~~~~ 255 (278)
..|++. .+|+.+++...+.+ ...+.|. .+.+++.+.|+...
T Consensus 130 ~~ygv~~~~g~~~p~~~lID~~G~i-~~~~~~~~~~~~~~~ell~~l~~l~ 179 (213)
T 2i81_A 130 KDYNVLFDDSVSLRAFVLIDMNGIV-QHLLVNNLAIGRSVDEILRIIDAIQ 179 (213)
T ss_dssp HHTTCEETTTEECEEEEEECTTSBE-EEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HHhCCccccCCcccEEEEECCCCEE-EEEEecCCCCCCCHHHHHHHHHHHH
Confidence 134677 79999998655444 2233332 46889999888665
No 367
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=98.26 E-value=2.3e-06 Score=66.33 Aligned_cols=90 Identities=13% Similarity=0.153 Sum_probs=69.3
Q ss_pred cCCceEEEEEeCc-cc-hHHHHHHHHHHHHHhcC----ceEEEEEeCCCcccc-------------------------hh
Q 023747 36 IDTLDMVYVFAKA-DD-LKSLLEPLEDIARNFKG----KIMFTAVDIADEDLA-------------------------KP 84 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~-c~~~~~~~~~la~~~~~----~v~f~~vd~~~~~~~-------------------------~~ 84 (278)
.+++++|.||++| ++ |....|.+.+++++|++ .+.|+.|+++..... ..
T Consensus 34 ~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~d~~~~~~~ 113 (172)
T 2k6v_A 34 QDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADRYAKAFHPSFLGLSGSPEAVRE 113 (172)
T ss_dssp TTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEEEECCCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcEEEeCCHHHHHH
Confidence 4578999999999 86 99999999999999984 599999998743110 25
Q ss_pred HHHHcCC---------------CCCCceEEEEecCCcceeecCCCCC--ChHHHHHHHHHH
Q 023747 85 FLTLFGL---------------EESKNTVVTAFDNKAISKFLLESDL--TPSNIEEFCSRL 128 (278)
Q Consensus 85 l~~~~~i---------------~~~~Ptl~~~~~~~~~~~~~~~g~~--~~~~i~~fi~~~ 128 (278)
+++.||+ .+. |++ .+++ ++...+.+.|.. +.++|.+.++++
T Consensus 114 ~~~~~gv~~~~~~~~~~~~~~i~~~-P~~-~lid-~G~i~~~~~g~~~~~~~~l~~~l~~l 171 (172)
T 2k6v_A 114 AAQTFGVFYQKSQYRGPGEYLVDHT-ATT-FVVK-EGRLVLLYSPDKAEATDRVVADLQAL 171 (172)
T ss_dssp HHHHHTCCEEEEEEEETTEEEEEEC-CCE-EEEE-TTEEEEEECHHHHTCHHHHHHHHHHC
T ss_pred HHHhcCeEEEeccCCCCCCceEecC-CEE-EEEE-CCEEEEEECCCCCCCHHHHHHHHHHh
Confidence 6677764 466 999 7777 555566667776 888898888764
No 368
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.26 E-value=1.1e-06 Score=62.32 Aligned_cols=79 Identities=10% Similarity=0.122 Sum_probs=61.7
Q ss_pred cCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCC--CcccchhHHHHcCCCCCCceEEEEecCCcceeecC
Q 023747 36 IDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIA--DEDLAKPFLTLFGLEESKNTVVTAFDNKAISKFLL 112 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~--~~~~~~~l~~~~~i~~~~Ptl~~~~~~~~~~~~~~ 112 (278)
...+.++.|+++| ++|+.+.+.+++++. .+.|..+|.+ +. +++..+|| .+. |++ +.++.. . .
T Consensus 14 ~~~~~v~~f~~~~C~~C~~~~~~L~~l~~----~i~~~~vdi~~~~~---~el~~~~g-~~v-P~l--~~~g~~-~---~ 78 (100)
T 1wjk_A 14 RALPVLTLFTKAPCPLCDEAKEVLQPYKD----RFILQEVDITLPEN---STWYERYK-FDI-PVF--HLNGQF-L---M 78 (100)
T ss_dssp CCCCEEEEEECSSCHHHHHHHHHTSTTSS----SSEEEEEETTSSTT---HHHHHHSS-SSC-SEE--EESSSE-E---E
T ss_pred CCCCEEEEEeCCCCcchHHHHHHHHHhhh----CCeEEEEECCCcch---HHHHHHHC-CCC-CEE--EECCEE-E---E
Confidence 3456788899999 999999999987653 2899999998 55 89999999 998 988 345432 1 1
Q ss_pred CCCCChHHHHHHHHHHh
Q 023747 113 ESDLTPSNIEEFCSRLL 129 (278)
Q Consensus 113 ~g~~~~~~i~~fi~~~~ 129 (278)
.+..+.+.|.+++++.+
T Consensus 79 ~~g~~~~~l~~~l~~~~ 95 (100)
T 1wjk_A 79 MHRVNTSKLEKQLRKLS 95 (100)
T ss_dssp ESSCCHHHHHHHHHSSS
T ss_pred ecCCCHHHHHHHHHHHH
Confidence 35688899999997654
No 369
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=98.24 E-value=4.2e-06 Score=64.16 Aligned_cols=90 Identities=12% Similarity=0.073 Sum_probs=65.9
Q ss_pred cCCceEEEEE-eCc-cchHHHHHHHHHHHHHhcC-ceEEEEEeCCCc------------------c--cchhHHHHcCCC
Q 023747 36 IDTLDMVYVF-AKA-DDLKSLLEPLEDIARNFKG-KIMFTAVDIADE------------------D--LAKPFLTLFGLE 92 (278)
Q Consensus 36 ~~~~~~v~F~-~~~-~~c~~~~~~~~~la~~~~~-~v~f~~vd~~~~------------------~--~~~~l~~~~~i~ 92 (278)
++++++|.|| ++| ++|....|.+.+++++|++ .+.++.|+++.. + ....+++.||+.
T Consensus 35 gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~ 114 (160)
T 1xvw_A 35 GAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGPPPTHKIWATQSGFTFPLLSDFWPHGAVSQAYGVF 114 (160)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTTTTHHHHHTTCE
T ss_pred CCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCCHHHHHHHHHhcCCCceEEecCCcChHHHHHcCCc
Confidence 3348999998 999 9999999999999999975 489998888641 0 016899999999
Q ss_pred ----CCCc--eEEEEecCCcceeecCCCCC----ChHHHHHHHHH
Q 023747 93 ----ESKN--TVVTAFDNKAISKFLLESDL----TPSNIEEFCSR 127 (278)
Q Consensus 93 ----~~~P--tl~~~~~~~~~~~~~~~g~~----~~~~i~~fi~~ 127 (278)
++ | +. .+++..+...+.+.|.. ..+++.+.+++
T Consensus 115 ~~~~~~-p~~~~-~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~ 157 (160)
T 1xvw_A 115 NEQAGI-ANRGT-FVVDRSGIIRFAEMKQPGEVRDQRLWTDALAA 157 (160)
T ss_dssp ETTTTE-ECSEE-EEECTTSBEEEEEECCTTCCCCHHHHHHHHHH
T ss_pred cccCCC-eeeeE-EEECCCCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 88 8 77 56665544555555543 45666666554
No 370
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=98.24 E-value=1e-05 Score=62.39 Aligned_cols=93 Identities=15% Similarity=0.129 Sum_probs=68.2
Q ss_pred cCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCc-eEEEEEeCCCc------c--cchhH-HHHc---------------
Q 023747 36 IDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGK-IMFTAVDIADE------D--LAKPF-LTLF--------------- 89 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~-v~f~~vd~~~~------~--~~~~l-~~~~--------------- 89 (278)
.+++++|.||++| ++|....|.+.+++++|++. +.++.|+++.. + ....+ .+++
T Consensus 30 ~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 109 (169)
T 2v1m_A 30 RGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCNQFGGQEPWAEAEIKKFVTEKYGVQFDMFSKIKVNGS 109 (169)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSEEBCCCCCSST
T ss_pred CCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEEECCccCCCCCCCHHHHHHHHHHhcCCCCceEEEEeecCc
Confidence 4578999999999 99999999999999999875 99999988631 0 00122 1333
Q ss_pred --------------C-----CCCCCceEEEEecCCcceeecCCCCCChHHHHHHHHHHhc
Q 023747 90 --------------G-----LEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLH 130 (278)
Q Consensus 90 --------------~-----i~~~~Ptl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 130 (278)
| |... |+. .+++..+...+.+.|..+.+.+.+.+++.+.
T Consensus 110 ~~~~~~~~l~~~~~~~~~~~i~~~-P~~-~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 167 (169)
T 2v1m_A 110 DADDLYKFLKSRQHGTLTNNIKWN-FSK-FLVDRQGQPVKRYSPTTAPYDIEGDIMELLE 167 (169)
T ss_dssp TSCHHHHHHHHHSCCSSSCSCCST-TCE-EEECTTSCEEEEECTTSCGGGGHHHHHHHHH
T ss_pred cccHHHHHHHhhcCCccCCccccc-ceE-EEECCCCCEEEEcCCCCCHHHHHHHHHHHhc
Confidence 3 2234 777 6666555566667888888999999988764
No 371
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=98.24 E-value=7.3e-07 Score=60.38 Aligned_cols=57 Identities=5% Similarity=-0.029 Sum_probs=46.7
Q ss_pred eEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCC-CcccchhHHHHcCCCCCCceEEEE
Q 023747 40 DMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIA-DEDLAKPFLTLFGLEESKNTVVTA 101 (278)
Q Consensus 40 ~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~-~~~~~~~l~~~~~i~~~~Ptl~~~ 101 (278)
.++.|+++| ++|+.+.+.+++++.++...+.+..+|.+ +. .++++++|+.+. |++ .+
T Consensus 3 ~~~~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~gv~~v-Pt~-~i 61 (80)
T 2k8s_A 3 SKAIFYHAGCPVCVSAEQAVANAIDPSKYTVEIVHLGTDKAR---IAEAEKAGVKSV-PAL-VI 61 (80)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHSCTTTEEEEEEETTTCSST---HHHHHHHTCCEE-EEE-EE
T ss_pred ceEEEeCCCCCchHHHHHHHHHHHHhcCCeEEEEEecCChhh---HHHHHHcCCCcC-CEE-EE
Confidence 477899999 99999999999998887655666666654 34 789999999999 999 44
No 372
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=98.24 E-value=2.4e-06 Score=68.50 Aligned_cols=46 Identities=11% Similarity=0.036 Sum_probs=37.8
Q ss_pred CCCcEEEEEECCCChh-HHHHHHHHHHHHHHhcCC--CceEEEEEeCCC
Q 023747 165 SHKDVLLEVYTPWCVT-CETTSKQIEKLAKHFKGL--DNLVIAKIDASA 210 (278)
Q Consensus 165 ~~~~~~v~f~~~~c~~-c~~~~~~~~~~a~~~~~~--~~~~~~~vd~~~ 210 (278)
.+++++|.||++||++ |....+.+.++...+... .++.++.|+++.
T Consensus 40 ~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~ 88 (200)
T 2b7k_A 40 LGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDP 88 (200)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCT
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCC
Confidence 3789999999999997 999999999988887531 258888888774
No 373
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=97.54 E-value=1.5e-07 Score=72.35 Aligned_cols=90 Identities=9% Similarity=0.015 Sum_probs=64.1
Q ss_pred cCCceEEEEEeCc-cchHHHHHHHHH-HHHHhc--CceEEEEEeCCCcccchhHHHH----------------------c
Q 023747 36 IDTLDMVYVFAKA-DDLKSLLEPLED-IARNFK--GKIMFTAVDIADEDLAKPFLTL----------------------F 89 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~~~~~~~-la~~~~--~~v~f~~vd~~~~~~~~~l~~~----------------------~ 89 (278)
.+++++|.||++| ++|+...|.+.+ ++.++. ..+.++.|+++.. .+.+++ |
T Consensus 32 ~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~---~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 108 (159)
T 2ls5_A 32 RGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEP---LEKVLAFAKSTGVTYPLGLDPGADIFAKY 108 (159)
Confidence 4568999999999 999999999998 988887 3588888888765 333333 3
Q ss_pred C--CCCCCceEEEEecCCcceeecCCCCCChHHHHHHHHHHhcC
Q 023747 90 G--LEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHG 131 (278)
Q Consensus 90 ~--i~~~~Ptl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~ 131 (278)
+ +.++ |++ .+++..+...+.+.| .+.+++.++++.+.+.
T Consensus 109 ~~~~~~~-P~~-~lid~~G~i~~~~~g-~~~~~l~~~l~~l~~~ 149 (159)
T 2ls5_A 109 ALRDAGI-TRN-VLIDREGKIVKLTRL-YNEEEFASLVQQINEM 149 (159)
Confidence 3 4567 998 677544444444444 5666777777776543
No 374
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=98.22 E-value=1e-05 Score=63.96 Aligned_cols=93 Identities=14% Similarity=0.105 Sum_probs=68.4
Q ss_pred cCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCc-eEEEEEeCCC------cccchhHHH----H---------------
Q 023747 36 IDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGK-IMFTAVDIAD------EDLAKPFLT----L--------------- 88 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~-v~f~~vd~~~------~~~~~~l~~----~--------------- 88 (278)
.+++++|.||++| ++|....|.+.+++++|+++ +.++.|+++. .+. ..+.+ .
T Consensus 45 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~e~~~~-~~~~~~~~~~~~~~~p~~~~~d~~~ 123 (187)
T 3dwv_A 45 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSNQFGGQEPGNE-EEIKEFVCTKFKAEFPIMAKINVNG 123 (187)
T ss_dssp TTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBCCCSSCSSSBT-THHHHSCCBCCCCSSCBBCCBCCSC
T ss_pred CCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECcccCCCCCCCH-HHHHHHHHhccCCCCceeeccccCC
Confidence 4578999999999 99999999999999999875 8888888762 100 12221 1
Q ss_pred -----------------cCCCCCCc---eEEEEecCCcceeecCCCCCChHHHHHHHHHHhcC
Q 023747 89 -----------------FGLEESKN---TVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHG 131 (278)
Q Consensus 89 -----------------~~i~~~~P---tl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~ 131 (278)
+++... | +. .+++.++...+.+.|..+.++|.+.+++++++
T Consensus 124 ~~~~~~~~~l~~~~~~~~~~~~i-P~~~~~-~liD~~G~i~~~~~g~~~~~~l~~~i~~lL~~ 184 (187)
T 3dwv_A 124 ENAHPLYEYMKKTKPGILATKAI-KWNFTS-FLIDRDGVPVERFSPGASVKDIEEKLIPLLGS 184 (187)
T ss_dssp C-CCHHHHHHHHHSCCSBSSSSC-CSTTCE-EEECTTSCEEEEECTTCCHHHHHHHHHHHC--
T ss_pred cchhHHHHHHHhhcCCccCCCcc-ccceeE-EEECCCCCEEEEECCCCCHHHHHHHHHHHHhc
Confidence 133344 6 77 67766656667778889999999999998754
No 375
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.21 E-value=6.8e-06 Score=75.61 Aligned_cols=81 Identities=14% Similarity=0.065 Sum_probs=68.4
Q ss_pred CCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCceEEEEecCCcceeecCCCC
Q 023747 37 DTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFDNKAISKFLLESD 115 (278)
Q Consensus 37 ~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Ptl~~~~~~~~~~~~~~~g~ 115 (278)
....++.|+++| ++|+.+.|.+++++..+. ++.+..+|.+.+ ++++++|+|.+. ||+ .+ ++. ... .|.
T Consensus 117 ~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~-~v~~~~vd~~~~---~~~~~~~~i~sv-Pt~-~i-~g~--~~~--~G~ 185 (521)
T 1hyu_A 117 GDFEFETYYSLSCHNCPDVVQALNLMAVLNP-RIKHTAIDGGTF---QNEITERNVMGV-PAV-FV-NGK--EFG--QGR 185 (521)
T ss_dssp SCEEEEEEECTTCSSHHHHHHHHHHHHHHCT-TEEEEEEETTTC---HHHHHHTTCCSS-SEE-EE-TTE--EEE--ESC
T ss_pred CCcceEEEECCCCcCcHHHHHHHHHHHhHcC-ceEEEEEechhh---HHHHHHhCCCcc-CEE-EE-CCE--EEe--cCC
Confidence 445688899999 999999999999999987 699999999999 999999999999 999 44 433 222 488
Q ss_pred CChHHHHHHHHHH
Q 023747 116 LTPSNIEEFCSRL 128 (278)
Q Consensus 116 ~~~~~i~~fi~~~ 128 (278)
.+.++|.+++...
T Consensus 186 ~~~~~l~~~l~~~ 198 (521)
T 1hyu_A 186 MTLTEIVAKVDTG 198 (521)
T ss_dssp CCHHHHHHHHCCS
T ss_pred CCHHHHHHHHhhc
Confidence 8999999998653
No 376
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=98.20 E-value=5.8e-06 Score=63.93 Aligned_cols=87 Identities=11% Similarity=0.153 Sum_probs=62.0
Q ss_pred CCCcEEEEEECCC-ChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC------------------------CCCCC
Q 023747 165 SHKDVLLEVYTPW-CVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH------------------------PKLQV 218 (278)
Q Consensus 165 ~~~~~~v~f~~~~-c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~------------------------~~~~i 218 (278)
.+++++|.||++| |++|....+.+.+++..+ . ++.+..|+.+.. .. ..|++
T Consensus 43 ~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~--~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~v 119 (167)
T 2jsy_A 43 KGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL-G--DVNVYTISADLPFAQARWCGANGIDKVETLSDHRDMSFGEAFGV 119 (167)
T ss_dssp TTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH-S--SCEEEEEECSSGGGTSCCGGGSSCTTEEEEEGGGTCHHHHHTTC
T ss_pred CCCeEEEEEecCCCCCchHHHHHHHHHHHHHc-C--CCEEEEEECCCHHHHHHHHHhcCCCCceEeeCCchhHHHHHhCC
Confidence 3689999999999 999999999999999999 3 688888887642 11 12344
Q ss_pred cC------CCeEEEEeCCCccCceEecC-----CCCHHHHHHHHHHHh
Q 023747 219 EE------YPTLLFYPAGDKANPIKVSA-----RSSSKNIAAFIKEQL 255 (278)
Q Consensus 219 ~~------~Ptl~~f~~g~~~~~~~~~g-----~~~~~~l~~~i~~~~ 255 (278)
.. .|+.+++...+.+ ...+.| ..+.+.+.+.|++.+
T Consensus 120 ~~~~~g~~~p~~~lid~~G~i-~~~~~g~~~~~~~~~~~l~~~l~~ll 166 (167)
T 2jsy_A 120 YIKELRLLARSVFVLDENGKV-VYAEYVSEATNHPNYEKPIEAAKALV 166 (167)
T ss_dssp BBTTTCSBCCEEEEECTTSCE-EEEEECSBTTSCCCSHHHHHHHHHHH
T ss_pred ccccCCceeeEEEEEcCCCcE-EEEEecCCcCCCCCHHHHHHHHHHhh
Confidence 44 4998888554444 224443 235588888887654
No 377
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=98.20 E-value=6.6e-07 Score=60.60 Aligned_cols=69 Identities=13% Similarity=0.170 Sum_probs=49.5
Q ss_pred EEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC----CCCCCcCCCeEEEEeCCCccCceEecCCCCH
Q 023747 170 LLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH----PKLQVEEYPTLLFYPAGDKANPIKVSARSSS 244 (278)
Q Consensus 170 ~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~----~~~~i~~~Ptl~~f~~g~~~~~~~~~g~~~~ 244 (278)
++.|+++||++|+.+.+.+.+. ++.+..+|++.+ +. .++++.++|+++ .+|+. .+..+.
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~--------~i~~~~vdi~~~~~~~~~~~~~g~~~vP~~~--~~g~~------~~g~~~ 66 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENR--------GFDFEMINVDRVPEAAEALRAQGFRQLPVVI--AGDLS------WSGFRP 66 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT--------TCCCEEEETTTCHHHHHHHHHTTCCSSCEEE--ETTEE------EESCCH
T ss_pred EEEEcCCCChhHHHHHHHHHHC--------CCCeEEEECCCCHHHHHHHHHhCCCccCEEE--ECCEE------EecCCH
Confidence 6789999999999998888763 366778898876 33 247899999983 35532 234667
Q ss_pred HHHHHHHHHH
Q 023747 245 KNIAAFIKEQ 254 (278)
Q Consensus 245 ~~l~~~i~~~ 254 (278)
+.|.++|.++
T Consensus 67 ~~l~~~l~~~ 76 (81)
T 1h75_A 67 DMINRLHPAP 76 (81)
T ss_dssp HHHGGGSCCC
T ss_pred HHHHHHHhcc
Confidence 7777666443
No 378
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=98.20 E-value=3.6e-06 Score=66.50 Aligned_cols=92 Identities=11% Similarity=0.057 Sum_probs=72.1
Q ss_pred CCceEEEEE-eCc-cchHHHHHHHHHHHHHhcC-ceEEEEEeCCCc----------------------ccchhHHHHcCC
Q 023747 37 DTLDMVYVF-AKA-DDLKSLLEPLEDIARNFKG-KIMFTAVDIADE----------------------DLAKPFLTLFGL 91 (278)
Q Consensus 37 ~~~~~v~F~-~~~-~~c~~~~~~~~~la~~~~~-~v~f~~vd~~~~----------------------~~~~~l~~~~~i 91 (278)
++++++.|| ++| ++|....|.+.+++++|++ .+.++.|+.+.. +....+++.||+
T Consensus 31 gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 110 (187)
T 1we0_A 31 GKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPSQTISRQFDV 110 (187)
T ss_dssp SSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHSCHHHHTCCSEEEECTTCHHHHHTTC
T ss_pred CCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHHhccccCCCceEEECCchHHHHHhCC
Confidence 478999999 999 9999999999999999975 488888888741 001578999999
Q ss_pred C------CCCceEEEEecCCcceeecCCCC----CChHHHHHHHHHHhc
Q 023747 92 E------ESKNTVVTAFDNKAISKFLLESD----LTPSNIEEFCSRLLH 130 (278)
Q Consensus 92 ~------~~~Ptl~~~~~~~~~~~~~~~g~----~~~~~i~~fi~~~~~ 130 (278)
. +. |++ .+++..+...+.+.|. .+.+++.+.++.+..
T Consensus 111 ~~~~~g~~~-P~~-~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~ 157 (187)
T 1we0_A 111 LNEETGLAD-RGT-FIIDPDGVIQAIEINADGIGRDASTLINKVKAAQY 157 (187)
T ss_dssp EETTTTEEC-EEE-EEECTTSBEEEEEEECTTSCCCTTHHHHHHHHHHH
T ss_pred CcCCCCcee-eEE-EEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHhh
Confidence 8 88 999 7776555555555443 378899999988764
No 379
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.20 E-value=1.6e-06 Score=70.28 Aligned_cols=78 Identities=14% Similarity=0.277 Sum_probs=56.6
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCC-----------------------------------
Q 023747 165 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDAS----------------------------------- 209 (278)
Q Consensus 165 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~----------------------------------- 209 (278)
+++.+++.|+++||++|+.+.+.+.++... ++.+..+...
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~~-----~v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~~~~ 159 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYNDL-----GITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNLPK 159 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHHHT-----TEEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTCCCS
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHhC-----CcEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCCCCC
Confidence 467889999999999999999999987652 2444333221
Q ss_pred ----CC------CC-CCCCCcCCCeEEEEeCCCccCceEecCCCCHHHHHHHHHH
Q 023747 210 ----AN------EH-PKLQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKE 253 (278)
Q Consensus 210 ----~~------~~-~~~~i~~~Ptl~~f~~g~~~~~~~~~g~~~~~~l~~~i~~ 253 (278)
.. ++ .+++|+++|++++ .+|+ .+.|..+.+.|.++|.+
T Consensus 160 ~~~~~~~v~~~~~l~~~~gV~gTPt~vi-~nG~-----~~~G~~~~~~l~~~l~~ 208 (211)
T 1t3b_A 160 EVKTPNIVKKHYELGIQFGVRGTPSIVT-STGE-----LIGGYLKPADLLRALEE 208 (211)
T ss_dssp SCCCSSHHHHHHHHHHHHTCCSSCEEEC-TTSC-----CCCSCCCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHcCCCcCCEEEE-eCCE-----EecCCCCHHHHHHHHHh
Confidence 00 11 2458999999998 6664 35788899999999875
No 380
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=98.19 E-value=5.2e-06 Score=67.70 Aligned_cols=89 Identities=13% Similarity=0.135 Sum_probs=65.1
Q ss_pred CCCcEEEEEEC-CCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-----------------------------CC-
Q 023747 165 SHKDVLLEVYT-PWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-----------------------------EH- 213 (278)
Q Consensus 165 ~~~~~~v~f~~-~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-----------------------------~~- 213 (278)
.+++++|.||+ +||++|....|.+.++...|+.. ++.++.|+++.. .+
T Consensus 68 ~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~-~v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~ 146 (222)
T 3ztl_A 68 RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSR-NCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEIS 146 (222)
T ss_dssp TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTT-TEEEEEEESSCHHHHHHHHHSCGGGTSCCSCSSCEEECSSSHHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHHHHhhhhccccccceeEEeCCchHHH
Confidence 36899999996 99999999999999999999754 588888888741 01
Q ss_pred CCCCCc------CCCeEEEEeCCCccCceEecCC----CCHHHHHHHHHHHh
Q 023747 214 PKLQVE------EYPTLLFYPAGDKANPIKVSAR----SSSKNIAAFIKEQL 255 (278)
Q Consensus 214 ~~~~i~------~~Ptl~~f~~g~~~~~~~~~g~----~~~~~l~~~i~~~~ 255 (278)
..|++. .+|+.+++...+.+ ...+.|. ...+++++.|+..-
T Consensus 147 ~~ygv~~~~~g~~~P~~~lID~~G~I-~~~~~g~~~~~~~~~~il~~l~~l~ 197 (222)
T 3ztl_A 147 KAYGVFDEEDGNAFRGLFIIDPNGIL-RQITINDKPVGRSVDETLRLLDAFQ 197 (222)
T ss_dssp HHTTCBCTTTSSBCEEEEEECTTSEE-EEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHcCCeecCCCCccceEEEECCCCeE-EEEEecCCCCCCCHHHHHHHHHHhh
Confidence 134666 78999999655544 2234342 35678888886543
No 381
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=98.17 E-value=4.6e-06 Score=56.80 Aligned_cols=77 Identities=13% Similarity=0.136 Sum_probs=58.6
Q ss_pred EEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcc-cchhHHHHcC--CCCCCceEEEEecCCcceeecCCCCC
Q 023747 41 MVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADED-LAKPFLTLFG--LEESKNTVVTAFDNKAISKFLLESDL 116 (278)
Q Consensus 41 ~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~-~~~~l~~~~~--i~~~~Ptl~~~~~~~~~~~~~~~g~~ 116 (278)
++.|+++| ++|+.+.+.+++++.++++ +.|..+|.+... ...++.+.+| +.++ |++ . .++. .. .|
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~~-i~~~~vdi~~~~~~~~~l~~~~~~~~~~v-P~i-~-~~g~---~i--~~-- 71 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNERDD-FQYQYVDIRAEGITKEDLQQKAGKPVETV-PQI-F-VDQQ---HI--GG-- 71 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHSS-CEEEEECHHHHTCCSHHHHHHTCCCSCCS-CEE-E-ETTE---EE--ES--
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCCC-ceEEEEecccChHHHHHHHHHhCCCCcee-CeE-E-ECCE---EE--EC--
Confidence 67789999 9999999999999999877 999999987541 1137999999 8999 999 3 4432 22 12
Q ss_pred ChHHHHHHHHHHh
Q 023747 117 TPSNIEEFCSRLL 129 (278)
Q Consensus 117 ~~~~i~~fi~~~~ 129 (278)
.++|.+++++.+
T Consensus 72 -~~~l~~~~~~~~ 83 (85)
T 1ego_A 72 -YTDFAAWVKENL 83 (85)
T ss_dssp -SHHHHHHHHHHH
T ss_pred -HHHHHHHHHHhc
Confidence 368888887754
No 382
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=98.15 E-value=2.6e-06 Score=67.99 Aligned_cols=91 Identities=11% Similarity=0.157 Sum_probs=70.7
Q ss_pred CCceEEEEE-eCc-cchHHHHHHHHHHHHHhcCc-eEEEEEeCCCcc-------------------------cchhHHHH
Q 023747 37 DTLDMVYVF-AKA-DDLKSLLEPLEDIARNFKGK-IMFTAVDIADED-------------------------LAKPFLTL 88 (278)
Q Consensus 37 ~~~~~v~F~-~~~-~~c~~~~~~~~~la~~~~~~-v~f~~vd~~~~~-------------------------~~~~l~~~ 88 (278)
+++++|.|| ++| ++|....|.+.+++++|++. +.++.|+.+... ....+++.
T Consensus 33 gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 112 (198)
T 1zof_A 33 KNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSISRD 112 (198)
T ss_dssp SSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCCCSSCEEECTTSHHHHH
T ss_pred CCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHhhhhcccccCceeEEEECCchHHHHH
Confidence 568999999 899 99999999999999999753 889888876410 01578999
Q ss_pred cCCC-----CCCceEEEEecCCcceeecCCCC----CChHHHHHHHHHHh
Q 023747 89 FGLE-----ESKNTVVTAFDNKAISKFLLESD----LTPSNIEEFCSRLL 129 (278)
Q Consensus 89 ~~i~-----~~~Ptl~~~~~~~~~~~~~~~g~----~~~~~i~~fi~~~~ 129 (278)
||+. +. |++ .+++.++...+.+.|. .+.+++.+.++.+.
T Consensus 113 ~~v~~~~g~~~-P~~-~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 160 (198)
T 1zof_A 113 YDVLFEEAIAL-RGA-FLIDKNMKVRHAVINDLPLGRNADEMLRMVDALL 160 (198)
T ss_dssp TTCEETTTEEC-EEE-EEEETTTEEEEEEEESSSCCCHHHHHHHHHHHHH
T ss_pred hCCcccCCccc-ceE-EEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 9999 88 999 7776554455555454 36788999988875
No 383
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=98.14 E-value=5.4e-06 Score=54.93 Aligned_cols=66 Identities=21% Similarity=0.341 Sum_probs=49.1
Q ss_pred EEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-C---CCCCcCCCeEEEEeCCCccCceEecCCCCH
Q 023747 170 LLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-P---KLQVEEYPTLLFYPAGDKANPIKVSARSSS 244 (278)
Q Consensus 170 ~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~---~~~i~~~Ptl~~f~~g~~~~~~~~~g~~~~ 244 (278)
++.|+++||++|+.+.+.+++. ++.+..+|++.+ +. . ++++.++|++++ +|+ ..+..+.
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~--------~i~~~~~di~~~~~~~~~~~~~~~~~vP~l~~--~g~------~~~g~~~ 66 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA--------GLAYNTVDISLDDEARDYVMALGYVQAPVVEV--DGE------HWSGFRP 66 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT--------TCCCEEEETTTCHHHHHHHHHTTCBCCCEEEE--TTE------EEESCCH
T ss_pred EEEEeCCCChHHHHHHHHHHHc--------CCCcEEEECCCCHHHHHHHHHcCCCccCEEEE--CCe------EEcCCCH
Confidence 6789999999999998888764 366777888876 33 2 678999999984 543 1334677
Q ss_pred HHHHHHH
Q 023747 245 KNIAAFI 251 (278)
Q Consensus 245 ~~l~~~i 251 (278)
+.|.++|
T Consensus 67 ~~l~~~l 73 (75)
T 1r7h_A 67 ERIKQLQ 73 (75)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7887776
No 384
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=98.13 E-value=7.2e-06 Score=64.46 Aligned_cols=92 Identities=9% Similarity=0.069 Sum_probs=66.2
Q ss_pred cCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCc-eEEEEEeCCC--------cccchhHHHH-cC--------------
Q 023747 36 IDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGK-IMFTAVDIAD--------EDLAKPFLTL-FG-------------- 90 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~-v~f~~vd~~~--------~~~~~~l~~~-~~-------------- 90 (278)
.+++++|.||++| ++|....|.+.+++++|+++ +.++.|+++. .....+++++ ++
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~g~ 127 (181)
T 2p31_A 48 RGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPDSNKEIESFARRTYSVSFPMFSKIAVTGT 127 (181)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCSST
T ss_pred CCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcCCCCCCCCCHHHHHHHHHhhcCCCceeEeecccCCc
Confidence 3578999999999 99999999999999999875 9999998863 1011234444 33
Q ss_pred ---------CCCCCc-------eEEEEecCCcceeecCCCCCChHHHHHHHHHHh
Q 023747 91 ---------LEESKN-------TVVTAFDNKAISKFLLESDLTPSNIEEFCSRLL 129 (278)
Q Consensus 91 ---------i~~~~P-------tl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 129 (278)
+.+. | +. .+++..+...+.+.|..+.++|.+.+++.+
T Consensus 128 ~~~~~~~~~~~~~-P~~~~~~~~~-~lid~~G~i~~~~~g~~~~~~l~~~i~~ll 180 (181)
T 2p31_A 128 GAHPAFKYLAQTS-GKEPTWNFWK-YLVAPDGKVVGAWDPTVSVEEVRPQITALV 180 (181)
T ss_dssp TSCHHHHHHHHHH-SCCCCSTTCE-EEECTTSCEEEEECTTSCHHHHHHHHHTTC
T ss_pred cchhhhhhhhhcC-CCccccceeE-EEEcCCCCEEEEeCCCCCHHHHHHHHHHHh
Confidence 2334 6 66 566555555666778888888888887653
No 385
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=97.42 E-value=3.2e-07 Score=68.94 Aligned_cols=69 Identities=10% Similarity=0.083 Sum_probs=54.1
Q ss_pred ecCCceEEEEEeCc-cchHHHHHHHHHHHHHhc---CceEEEEEeCCCccc----------------------chhHHHH
Q 023747 35 QIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFK---GKIMFTAVDIADEDL----------------------AKPFLTL 88 (278)
Q Consensus 35 ~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~---~~v~f~~vd~~~~~~----------------------~~~l~~~ 88 (278)
+++++++|.||++| ++|+...|.+.+++++++ ..+.++.|+++.... ...+++.
T Consensus 24 ~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (143)
T 2lus_A 24 KDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESHGDWLAIPYRSGPASNVTAK 103 (143)
Confidence 33338999999999 999999999999999993 357888887774410 1368999
Q ss_pred cCCCCCCceEEEEecCC
Q 023747 89 FGLEESKNTVVTAFDNK 105 (278)
Q Consensus 89 ~~i~~~~Ptl~~~~~~~ 105 (278)
|+|.++ |++ .+++.+
T Consensus 104 ~~v~~~-P~~-~lid~~ 118 (143)
T 2lus_A 104 YGITGI-PAL-VIVKKD 118 (143)
Confidence 999999 999 777633
No 386
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=98.12 E-value=8.7e-06 Score=62.61 Aligned_cols=87 Identities=9% Similarity=0.065 Sum_probs=61.1
Q ss_pred CCcEEEEEEC-CCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC----------------------CC-CCCCCcC-
Q 023747 166 HKDVLLEVYT-PWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN----------------------EH-PKLQVEE- 220 (278)
Q Consensus 166 ~~~~~v~f~~-~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~----------------------~~-~~~~i~~- 220 (278)
+++++|.||+ +||++|....+.+.++...++.. ++.+..|.++.. ++ ..|++..
T Consensus 35 gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~-~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 113 (163)
T 3gkn_A 35 GHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKA-GAKILGVSRDSVKSHDNFCAKQGFAFPLVSDGDEALCRAFDVIKE 113 (163)
T ss_dssp TSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHCCSSCEEECTTCHHHHHTTCEEE
T ss_pred CCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHhCCccc
Confidence 6789999998 99999999999999999999754 477777777631 11 1335554
Q ss_pred -----------CCeEEEEeCCCccCceEecCC---CCHHHHHHHHHHH
Q 023747 221 -----------YPTLLFYPAGDKANPIKVSAR---SSSKNIAAFIKEQ 254 (278)
Q Consensus 221 -----------~Ptl~~f~~g~~~~~~~~~g~---~~~~~l~~~i~~~ 254 (278)
+|+.+++...+.+ ...+.+. ...+.+.+.|++.
T Consensus 114 ~~~~~~~~~~~~p~~~lid~~G~i-~~~~~~~~~~~~~~~il~~l~~l 160 (163)
T 3gkn_A 114 KNMYGKQVLGIERSTFLLSPEGQV-VQAWRKVKVAGHADAVLAALKAH 160 (163)
T ss_dssp EEETTEEEEEECCEEEEECTTSCE-EEEECSCCSTTHHHHHHHHHHHH
T ss_pred cccccccccCcceEEEEECCCCeE-EEEEcCCCcccCHHHHHHHHHHH
Confidence 8999999655544 2244442 3346777777654
No 387
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=98.05 E-value=2.9e-05 Score=60.84 Aligned_cols=92 Identities=10% Similarity=0.078 Sum_probs=65.9
Q ss_pred cCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCc-eEEEEEeCCC--------cccchhHHHH-cCCC------------
Q 023747 36 IDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGK-IMFTAVDIAD--------EDLAKPFLTL-FGLE------------ 92 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~-v~f~~vd~~~--------~~~~~~l~~~-~~i~------------ 92 (278)
.+++++|.||++| ++|....|.+.+++++|+++ +.++.|+++. .....+++++ +++.
T Consensus 37 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 116 (180)
T 3kij_A 37 KGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPSKEVESFARKNYGVTFPIFHKIKILGS 116 (180)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCSST
T ss_pred CCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEECCccccCCCCCHHHHHHHHHHhcCCCCceeeeeeccCc
Confidence 4568999999999 99999999999999999875 9999998764 1111345556 5543
Q ss_pred --------------CCCce----EEEEecCCcceeecCCCCCChHHHHHHHHHHh
Q 023747 93 --------------ESKNT----VVTAFDNKAISKFLLESDLTPSNIEEFCSRLL 129 (278)
Q Consensus 93 --------------~~~Pt----l~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 129 (278)
+. |+ . .+++.++...+.+.|..+.+.+.+.+.+.+
T Consensus 117 ~~~~~~~~~~~~~~~~-p~~~~~~-~lid~~G~i~~~~~g~~~~~~l~~~i~~lL 169 (180)
T 3kij_A 117 EGEPAFRFLVDSSKKE-PRWNFWK-YLVNPEGQVVKFWRPEEPIEVIRPDIAALV 169 (180)
T ss_dssp TCCHHHHHHHHHHTCC-CSSTTCE-EEECTTSCEEEEECTTCCGGGTHHHHHHHH
T ss_pred cccHHHHHHHhcCCCC-ccccceE-EEECCCCCEEEEECCCCCHHHHHHHHHHHH
Confidence 13 54 5 466655556666778777777777666655
No 388
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=98.02 E-value=2.2e-05 Score=61.33 Aligned_cols=40 Identities=18% Similarity=0.348 Sum_probs=35.6
Q ss_pred CCcEEEEEECCC-ChhHHHHHHHHHHHHHHhcCCCceEEEEEeCC
Q 023747 166 HKDVLLEVYTPW-CVTCETTSKQIEKLAKHFKGLDNLVIAKIDAS 209 (278)
Q Consensus 166 ~~~~~v~f~~~~-c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~ 209 (278)
+++++|.||++| |++|....|.+.++... . ++.++.|+.+
T Consensus 44 gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~-~---~v~vv~Is~D 84 (175)
T 1xvq_A 44 GKSVLLNIFPSVDTPVCATSVRTFDERAAA-S---GATVLCVSKD 84 (175)
T ss_dssp TSCEEEEECSCCCSSCCCHHHHHHHHHHHH-T---TCEEEEEESS
T ss_pred CCEEEEEEEeCCCCchHHHHHHHHHHHHhh-c---CCEEEEEECC
Confidence 689999999999 99999999999999988 3 5888888876
No 389
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=98.02 E-value=3.3e-05 Score=62.22 Aligned_cols=42 Identities=5% Similarity=0.068 Sum_probs=37.8
Q ss_pred cCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCc-eEEEEEeCC
Q 023747 36 IDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGK-IMFTAVDIA 77 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~-v~f~~vd~~ 77 (278)
.+++++|.||++| ++|....|.+++++++|+++ +.++.|+++
T Consensus 46 ~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d 89 (208)
T 2f8a_A 46 RGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCN 89 (208)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEEECC
Confidence 3578999999999 99999999999999999865 999999886
No 390
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=98.01 E-value=1.9e-05 Score=62.61 Aligned_cols=42 Identities=14% Similarity=0.256 Sum_probs=36.7
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeC
Q 023747 165 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDA 208 (278)
Q Consensus 165 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~ 208 (278)
+++..++.|+++||++|..+.+.+.++.+.+.. ++.|..+..
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~--~v~~~~~p~ 65 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPA--DVHFVRLPA 65 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCT--TEEEEEEEC
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCC--CeEEEEEeh
Confidence 467889999999999999999999999999876 687876665
No 391
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=98.01 E-value=8.3e-06 Score=67.38 Aligned_cols=85 Identities=12% Similarity=0.269 Sum_probs=59.6
Q ss_pred CCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCC-----------------------------------
Q 023747 166 HKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA----------------------------------- 210 (278)
Q Consensus 166 ~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~----------------------------------- 210 (278)
.+..++.|+++||++|+.+.+.+.++.+. + ++.+..+...-
T Consensus 97 ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~--g--~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~l~ 172 (241)
T 1v58_A 97 APVIVYVFADPFCPYCKQFWQQARPWVDS--G--KVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGGKLKLN 172 (241)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHT--T--SEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHTTTCCCCC
T ss_pred CCeEEEEEECCCChhHHHHHHHHHHHHhC--C--cEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHHhccCCCC
Confidence 56689999999999999999998887664 2 57666655410
Q ss_pred ---------------C-CC-CCCCCcCCCeEEEEeCCCccCceEecCCCCHHHHHHHHHHHhc
Q 023747 211 ---------------N-EH-PKLQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLK 256 (278)
Q Consensus 211 ---------------~-~~-~~~~i~~~Ptl~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~~ 256 (278)
+ .+ .+++|.++|++++...++.. ....|..+.+.|.++|.+...
T Consensus 173 ~~~~~~~~~~~~v~~~~~l~~~~gv~gtPt~vi~~~~G~~--~~~~G~~~~~~L~~~l~~~~~ 233 (241)
T 1v58_A 173 VPANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKENTL--QQAVGLPDQKTLNIIMGNKLQ 233 (241)
T ss_dssp CCSSCCHHHHHHHHHHHHHHHHHTCCSSCEEEEEETTTEE--EEEESSCCHHHHHHHTTC---
T ss_pred ccccCCHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCCE--EEecCCCCHHHHHHHHHHHHH
Confidence 0 00 14489999999998642332 257888999999998876554
No 392
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=98.01 E-value=2.4e-05 Score=62.30 Aligned_cols=91 Identities=7% Similarity=0.108 Sum_probs=70.0
Q ss_pred CCceEEEEE-eCc-cchHHHHHHHHHHHHHhcC-ceEEEEEeCCCcc-------------------------cchhHHHH
Q 023747 37 DTLDMVYVF-AKA-DDLKSLLEPLEDIARNFKG-KIMFTAVDIADED-------------------------LAKPFLTL 88 (278)
Q Consensus 37 ~~~~~v~F~-~~~-~~c~~~~~~~~~la~~~~~-~v~f~~vd~~~~~-------------------------~~~~l~~~ 88 (278)
+++++|.|| +.| ++|....|.+.+++++|++ .+.|+.|+++... ....+++.
T Consensus 34 gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ 113 (197)
T 1qmv_A 34 GKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRLSED 113 (197)
T ss_dssp TSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTCHHHHH
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhCCCCCCceEEEECCcHHHHHH
Confidence 468999999 999 9999999999999999975 4999999887420 02478999
Q ss_pred cCCC------CCCceEEEEecCCcceeecCCC----CCChHHHHHHHHHHh
Q 023747 89 FGLE------ESKNTVVTAFDNKAISKFLLES----DLTPSNIEEFCSRLL 129 (278)
Q Consensus 89 ~~i~------~~~Ptl~~~~~~~~~~~~~~~g----~~~~~~i~~fi~~~~ 129 (278)
||+. .+ |+. .+++..+...+.+.| ..+.+++.+.++...
T Consensus 114 ~gv~~~~~~~~~-P~~-~lid~~G~i~~~~~g~~~~~~~~~e~l~~l~~l~ 162 (197)
T 1qmv_A 114 YGVLKTDEGIAY-RGL-FIIDGKGVLRQITVNDLPVGRSVDEALRLVQAFQ 162 (197)
T ss_dssp TTCEETTTTEEC-EEE-EEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred cCCccCCCCcee-eEE-EEECCCCcEEEEEeCCCCCCCCHHHHHHHHHhcc
Confidence 9998 67 998 677655444554434 356788999888764
No 393
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=98.01 E-value=4.2e-05 Score=60.23 Aligned_cols=42 Identities=12% Similarity=0.044 Sum_probs=37.7
Q ss_pred cCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCc-eEEEEEeCC
Q 023747 36 IDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGK-IMFTAVDIA 77 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~-v~f~~vd~~ 77 (278)
.+++++|.||++| ++|....|.+.+++++|+++ +.++.|+++
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d 91 (185)
T 2gs3_A 48 RGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFPCN 91 (185)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECc
Confidence 3578999999999 99999999999999999865 999999876
No 394
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=98.00 E-value=3.7e-05 Score=60.33 Aligned_cols=90 Identities=14% Similarity=0.039 Sum_probs=63.1
Q ss_pred cCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCc-eEEEEEeCCCc------c--cchhHHHHc----------------
Q 023747 36 IDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGK-IMFTAVDIADE------D--LAKPFLTLF---------------- 89 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~-v~f~~vd~~~~------~--~~~~l~~~~---------------- 89 (278)
.+++++|.||++| ++|....|.+.+++++|+++ +.|+.|+++.. + ....+++++
T Consensus 46 ~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~ 125 (183)
T 2obi_A 46 RGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNGDD 125 (183)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHTTTCCSEEBCCCCCSSTT
T ss_pred CCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECCCCCCCCCCCHHHHHHHHHHcCCCceEEeeeccCCcc
Confidence 3578999999999 99999999999999999865 99999987630 0 001222222
Q ss_pred ---------------CC-----CCCCceEEEEecCCcceeecCCCCCChHHHHHHHHH
Q 023747 90 ---------------GL-----EESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSR 127 (278)
Q Consensus 90 ---------------~i-----~~~~Ptl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~ 127 (278)
|+ ... |+. .+++..+...+.+.|..+.++|.+.+++
T Consensus 126 ~~~~~~~l~~~~~~~g~~~~~i~~~-P~~-~lid~~G~i~~~~~g~~~~~~l~~~i~~ 181 (183)
T 2obi_A 126 AHPLWKWMKIQPKGKGILGNAIKWN-FTK-FLIDKNGCVVKRYGPMEEPLVIEKDLPH 181 (183)
T ss_dssp SCHHHHHHHTSTTTCCSSSSSCCST-TCE-EEECTTSCEEEEECTTSCTHHHHTTSGG
T ss_pred hhHHHHHhhccCCCCCccccccccc-ceE-EEECCCCCEEEEeCCCCCHHHHHHHHHH
Confidence 32 224 787 6676555556667787787777766654
No 395
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=97.97 E-value=2.5e-05 Score=62.51 Aligned_cols=91 Identities=10% Similarity=0.099 Sum_probs=70.3
Q ss_pred CCceEEEEE-eCc-cchHHHHHHHHHHHHHhcC-ceEEEEEeCCCc-------------------------ccchhHHHH
Q 023747 37 DTLDMVYVF-AKA-DDLKSLLEPLEDIARNFKG-KIMFTAVDIADE-------------------------DLAKPFLTL 88 (278)
Q Consensus 37 ~~~~~v~F~-~~~-~~c~~~~~~~~~la~~~~~-~v~f~~vd~~~~-------------------------~~~~~l~~~ 88 (278)
+++++|.|| +.| ++|....|.+.+++++|++ .+.|+.|+++.. +....+++.
T Consensus 36 gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ 115 (202)
T 1uul_A 36 GKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADKTKCIMKS 115 (202)
T ss_dssp TSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTCHHHHH
T ss_pred CCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCCCCCceeEEECCchHHHHH
Confidence 468899999 899 9999999999999999975 499999988641 002578999
Q ss_pred cCCC------CCCceEEEEecCCcceeecCCC----CCChHHHHHHHHHHh
Q 023747 89 FGLE------ESKNTVVTAFDNKAISKFLLES----DLTPSNIEEFCSRLL 129 (278)
Q Consensus 89 ~~i~------~~~Ptl~~~~~~~~~~~~~~~g----~~~~~~i~~fi~~~~ 129 (278)
||+. .. |++ .+++..+...+.+.| ..+.+++.+.++.+.
T Consensus 116 ygv~~~~~g~~~-P~~-~lid~~G~i~~~~~g~~~~~~~~~ell~~l~~l~ 164 (202)
T 1uul_A 116 YGVLKEEDGVAY-RGL-FIIDPKQNLRQITVNDLPVGRDVDEALRLVKAFQ 164 (202)
T ss_dssp HTCEETTTTEEC-EEE-EEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred cCCccCCCCcee-eEE-EEECCCCEEEEEEeCCCCCCCCHHHHHHHHHHhh
Confidence 9999 88 999 777655555554433 356789999988875
No 396
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=97.96 E-value=2.7e-05 Score=59.68 Aligned_cols=41 Identities=12% Similarity=0.135 Sum_probs=34.0
Q ss_pred CcEEEEEE-CCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCC
Q 023747 167 KDVLLEVY-TPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDAS 209 (278)
Q Consensus 167 ~~~~v~f~-~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~ 209 (278)
++++|.|| ++||++|....+.+.++...++... .+..|+++
T Consensus 36 ~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~--~vv~is~d 77 (159)
T 2a4v_A 36 RVVVFFVYPRASTPGSTRQASGFRDNYQELKEYA--AVFGLSAD 77 (159)
T ss_dssp SEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTC--EEEEEESC
T ss_pred CeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCC--cEEEEeCC
Confidence 46888887 8999999999999999999998753 66666654
No 397
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=97.95 E-value=9.1e-05 Score=59.99 Aligned_cols=43 Identities=16% Similarity=0.297 Sum_probs=37.3
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCC
Q 023747 165 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDAS 209 (278)
Q Consensus 165 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~ 209 (278)
.+++++|.|||+||++|. ..|.++++..+|+.. .+.+..|.++
T Consensus 55 ~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~-g~~Vlgvs~d 97 (215)
T 2i3y_A 55 VGKHILFVNVATYCGLTA-QYPELNALQEELKPY-GLVVLGFPCN 97 (215)
T ss_dssp TTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGG-TEEEEEEECC
T ss_pred CCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccC-CeEEEEEEcc
Confidence 378999999999999999 788999999999764 5888888764
No 398
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=97.92 E-value=3.6e-05 Score=62.52 Aligned_cols=92 Identities=13% Similarity=0.156 Sum_probs=71.4
Q ss_pred CCceEEEEE-eCc-cchHHHHHHHHHHHHHhcC-ceEEEEEeCCCc-------------------------ccchhHHHH
Q 023747 37 DTLDMVYVF-AKA-DDLKSLLEPLEDIARNFKG-KIMFTAVDIADE-------------------------DLAKPFLTL 88 (278)
Q Consensus 37 ~~~~~v~F~-~~~-~~c~~~~~~~~~la~~~~~-~v~f~~vd~~~~-------------------------~~~~~l~~~ 88 (278)
+++++|.|| +.| ++|....|.+.+++++|++ .+.|+.|+++.. +....+++.
T Consensus 56 Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~i~~~ 135 (220)
T 1zye_A 56 GKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISRD 135 (220)
T ss_dssp TSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHHH
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHhCCCcCCceEEEECCcHHHHHH
Confidence 478899999 899 9999999999999999964 488888887641 002578999
Q ss_pred cCCC------CCCceEEEEecCCcceeecCCC----CCChHHHHHHHHHHhc
Q 023747 89 FGLE------ESKNTVVTAFDNKAISKFLLES----DLTPSNIEEFCSRLLH 130 (278)
Q Consensus 89 ~~i~------~~~Ptl~~~~~~~~~~~~~~~g----~~~~~~i~~fi~~~~~ 130 (278)
||+. .. |++ .+++..+...+.+.| ..+.+++.+.++.+..
T Consensus 136 ygv~~~~~g~~~-P~~-~liD~~G~I~~~~~g~~~~~~~~~ell~~l~~l~~ 185 (220)
T 1zye_A 136 YGVLLEGPGLAL-RGL-FIIDPNGVIKHLSVNDLPVGRSVEETLRLVKAFQF 185 (220)
T ss_dssp TTCEETTTTEEC-EEE-EEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHHH
T ss_pred hCCeecCCCccc-ceE-EEECCCCEEEEEEecCCCCCCCHHHHHHHHHHhhh
Confidence 9999 88 999 788765555554333 3577899999988764
No 399
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=97.90 E-value=2.4e-05 Score=57.61 Aligned_cols=86 Identities=14% Similarity=0.243 Sum_probs=66.2
Q ss_pred eeeeeecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCceEEEEecCCcce
Q 023747 30 LLKVSQIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFDNKAIS 108 (278)
Q Consensus 30 ~~~~~~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Ptl~~~~~~~~~~ 108 (278)
+........+++|.||.+| ++| .+.|.++|+.+ +.+.|+..+ . ..+++++++. . |++ .+|......
T Consensus 32 ~e~fi~~~~v~VVGfF~~~~~~~---~~~F~~~A~~~-~d~~F~~t~---~---~~v~~~~~v~-~-~~v-vlfkkfde~ 98 (124)
T 2l4c_A 32 AMEFIAATEVAVIGFFQDLEIPA---VPILHSMVQKF-PGVSFGIST---D---SEVLTHYNIT-G-NTI-CLFRLVDNE 98 (124)
T ss_dssp HHHHHHTSSEEEEEECSCTTSTH---HHHHHHHHHHC-TTSEEEEEC---C---HHHHHHTTCC-S-SCE-EEEETTTTE
T ss_pred HHHHHhcCCCEEEEEECCCCChh---HHHHHHHHHhC-CCceEEEEC---h---HHHHHHcCCC-C-CeE-EEEEcCCCC
Confidence 3344467788999999998 666 78999999999 669998864 3 5799999998 5 999 555543334
Q ss_pred eecCCC----CCChHHHHHHHHHH
Q 023747 109 KFLLES----DLTPSNIEEFCSRL 128 (278)
Q Consensus 109 ~~~~~g----~~~~~~i~~fi~~~ 128 (278)
+..|.| ..+.++|.+|+...
T Consensus 99 ~~~~~g~~~~~~~~~~L~~FI~~n 122 (124)
T 2l4c_A 99 QLNLEDEDIESIDATKLSRFIEIN 122 (124)
T ss_dssp EEEECHHHHTTCCHHHHHHHHHHH
T ss_pred ceeecCcccCCCCHHHHHHHHHHh
Confidence 445675 68999999999863
No 400
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=97.89 E-value=1.9e-06 Score=61.37 Aligned_cols=57 Identities=14% Similarity=0.191 Sum_probs=39.6
Q ss_pred EEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC--------CC-CCCCCcCCCeEEEEeCCCc
Q 023747 169 VLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN--------EH-PKLQVEEYPTLLFYPAGDK 232 (278)
Q Consensus 169 ~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~--------~~-~~~~i~~~Ptl~~f~~g~~ 232 (278)
.++.|+++||++|+.+.+.+.+++..+. + +..+|++.+ .+ ..+++.++|+++ .+|+.
T Consensus 13 ~v~~f~~~~C~~C~~~~~~L~~~~~~~~---~--~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~i~--~~g~~ 78 (105)
T 1kte_A 13 KVVVFIKPTCPFCRKTQELLSQLPFKEG---L--LEFVDITATSDTNEIQDYLQQLTGARTVPRVF--IGKEC 78 (105)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHSCBCTT---S--EEEEEGGGSTTHHHHHHHHHHHHSCCCSCEEE--ETTEE
T ss_pred CEEEEEcCCCHhHHHHHHHHHHcCCCCC---c--cEEEEccCCCCHHHHHHHHHHHhCCCCcCeEE--ECCEE
Confidence 4778999999999999999987654432 2 444555543 13 256899999974 46653
No 401
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=97.89 E-value=7.4e-05 Score=56.75 Aligned_cols=105 Identities=13% Similarity=0.182 Sum_probs=75.2
Q ss_pred CCeEEEcccchHHHhhcCCCcEEEE-EECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCC---C-CCCCCcC--
Q 023747 148 ANVQIVVGKTFDDLVLNSHKDVLLE-VYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASANE---H-PKLQVEE-- 220 (278)
Q Consensus 148 ~~v~~l~~~~~~~~i~~~~~~~~v~-f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~~---~-~~~~i~~-- 220 (278)
..|..+|.++...+. ..+-+..++ |....-..-..+.+.+.++|+.+++ ++.|+.+|.+..+ . ..++++.
T Consensus 14 PLV~e~t~en~~~~~-~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkg--ki~Fv~vd~~~~~~~~~l~~fGl~~~~ 90 (147)
T 3bj5_A 14 PLVIEFTEQTAPKIF-GGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKG--KILFAFIDSDHTDNQRILEFFGLKKEE 90 (147)
T ss_dssp -CEEECCTTTHHHHH-SSSCCEEEEEECCTTSSSHHHHHHHHHHHHHTTTT--TCEEEEECTTCGGGHHHHHHTTCCGGG
T ss_pred CeeEEeccccHHHHh-cCCCceEEEEEecCCcHhHHHHHHHHHHHHHHcCC--ceEEEEEecchHhHHHHHHHcCCCccc
Confidence 358999999998875 444555444 4433333456788999999999998 7999999984332 2 3567774
Q ss_pred CCeEEEEeC-CCccCceEec-CCCCHHHHHHHHHHHhc
Q 023747 221 YPTLLFYPA-GDKANPIKVS-ARSSSKNIAAFIKEQLK 256 (278)
Q Consensus 221 ~Ptl~~f~~-g~~~~~~~~~-g~~~~~~l~~~i~~~~~ 256 (278)
+|++.++.. +... .+.+. +..+.+.|.+|+.+.+.
T Consensus 91 ~P~v~i~~~~~~~~-Ky~~~~~~~t~~~i~~Fv~d~l~ 127 (147)
T 3bj5_A 91 CPAVRLITLEEEMT-KYKPESEELTAERITEFCHRFLE 127 (147)
T ss_dssp CSEEEEEECSSSCE-EECCSCCCCCHHHHHHHHHHHHT
T ss_pred CCEEEEEecccccc-cCCCCcccCCHHHHHHHHHHHHc
Confidence 999999875 3222 22333 78999999999999885
No 402
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=97.87 E-value=5.6e-05 Score=61.09 Aligned_cols=92 Identities=12% Similarity=0.163 Sum_probs=70.0
Q ss_pred cCCceEEEEE-eCc-cchHHHHHHHHHHHHHhcC-ceEEEEEeCCCc-------------------------ccchhHHH
Q 023747 36 IDTLDMVYVF-AKA-DDLKSLLEPLEDIARNFKG-KIMFTAVDIADE-------------------------DLAKPFLT 87 (278)
Q Consensus 36 ~~~~~~v~F~-~~~-~~c~~~~~~~~~la~~~~~-~v~f~~vd~~~~-------------------------~~~~~l~~ 87 (278)
.+++++|.|| +.| +.|....|.+.+++++|++ .+.|+.|+.+.. +....+++
T Consensus 51 ~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 130 (213)
T 2i81_A 51 GKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSDITKSISK 130 (213)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHSSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCccCCCceEEECCchHHHH
Confidence 3467899999 899 9999999999999999963 488888887641 00257899
Q ss_pred HcCCC-----CCCceEEEEecCCcceeecCCC----CCChHHHHHHHHHHh
Q 023747 88 LFGLE-----ESKNTVVTAFDNKAISKFLLES----DLTPSNIEEFCSRLL 129 (278)
Q Consensus 88 ~~~i~-----~~~Ptl~~~~~~~~~~~~~~~g----~~~~~~i~~fi~~~~ 129 (278)
.||+. .. |++ .+++.++...+.+.| ..+.+++.+.++.+.
T Consensus 131 ~ygv~~~~g~~~-p~~-~lID~~G~i~~~~~~~~~~~~~~~ell~~l~~l~ 179 (213)
T 2i81_A 131 DYNVLFDDSVSL-RAF-VLIDMNGIVQHLLVNNLAIGRSVDEILRIIDAIQ 179 (213)
T ss_dssp HTTCEETTTEEC-EEE-EEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HhCCccccCCcc-cEE-EEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 99998 77 999 777765555554433 256889999888765
No 403
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=97.86 E-value=4.4e-06 Score=60.51 Aligned_cols=80 Identities=9% Similarity=0.017 Sum_probs=51.9
Q ss_pred CceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcc--cchhHHHHcCCCCCCceEEEEecCCcceeecCCC
Q 023747 38 TLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADED--LAKPFLTLFGLEESKNTVVTAFDNKAISKFLLES 114 (278)
Q Consensus 38 ~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~--~~~~l~~~~~i~~~~Ptl~~~~~~~~~~~~~~~g 114 (278)
.++++ ||++| ++|+.+.|.+++++.. +.++.+|.+... ....+++.||+.++ |++ +.++.. ...+.|
T Consensus 20 ~~vv~-f~a~~C~~C~~~~~~l~~~~~~----~~~v~v~~~~~~~~~~~~l~~~~~v~~~-Pt~--~~~g~~--v~~~~~ 89 (116)
T 2e7p_A 20 APVVV-FSKTYCGYCNRVKQLLTQVGAS----YKVVELDELSDGSQLQSALAHWTGRGTV-PNV--FIGGKQ--IGGCDT 89 (116)
T ss_dssp SSEEE-EECTTCHHHHHHHHHHHHHTCC----CEEEEGGGSTTHHHHHHHHHHHHSCCSS-CEE--EETTEE--EECHHH
T ss_pred CCEEE-EECCCChhHHHHHHHHHHcCCC----eEEEEccCCCChHHHHHHHHHHhCCCCc-CEE--EECCEE--ECChHH
Confidence 34444 99999 9999999999988644 345555544320 01359999999999 999 444432 222222
Q ss_pred CC---ChHHHHHHHHH
Q 023747 115 DL---TPSNIEEFCSR 127 (278)
Q Consensus 115 ~~---~~~~i~~fi~~ 127 (278)
.. +.+.+.+++.+
T Consensus 90 ~~~~~~~~~l~~~l~~ 105 (116)
T 2e7p_A 90 VVEKHQRNELLPLLQD 105 (116)
T ss_dssp HHHHHHTTCHHHHHHH
T ss_pred HHHHHhCChHHHHHHH
Confidence 22 55567788776
No 404
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=97.85 E-value=8.4e-05 Score=57.81 Aligned_cols=86 Identities=6% Similarity=0.085 Sum_probs=64.9
Q ss_pred ecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCc----------------------------------
Q 023747 35 QIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADE---------------------------------- 79 (278)
Q Consensus 35 ~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~---------------------------------- 79 (278)
...++.++.|+..| ++|..+.|.+.++.+++.+ +.+...+..-.
T Consensus 20 ~~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-v~~~~~~~p~~~~~s~~aa~~~~~a~~~~~~~~~~~~lf~~~~~~ 98 (175)
T 3gyk_A 20 PEGDVTVVEFFDYNCPYCRRAMAEVQGLVDADPN-VRLVYREWPILGEGSDFAARAALAARQQGKYEAFHWALMGMSGKA 98 (175)
T ss_dssp TTCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-EEEEEEECCCSCHHHHHHHHHHHHGGGGTCHHHHHHHHHTCSSCC
T ss_pred CCCCEEEEEEECCCCccHHHHHHHHHHHHHhCCC-EEEEEEeCCCCCCChHHHHHHHHHHHHHhHHHHHHHHHHhcCCCC
Confidence 34567899999999 9999999999999998766 66666653210
Q ss_pred --------------------------------ccchhHHHHcCCCCCCceEEEEecCCcceeecCCCCCChHHHHHHHHH
Q 023747 80 --------------------------------DLAKPFLTLFGLEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSR 127 (278)
Q Consensus 80 --------------------------------~~~~~l~~~~~i~~~~Ptl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~ 127 (278)
.....+++++||.+. ||+ .+ ++ .. +.|..+.+.+.+.+++
T Consensus 99 ~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gt-Pt~-~i-~g---~~--~~G~~~~~~l~~~i~~ 170 (175)
T 3gyk_A 99 NETGVLRIAREVGLDTEQLQRDMEAPEVTAHIAQSMALAQKLGFNGT-PSF-VV-ED---AL--VPGFVEQSQLQDAVDR 170 (175)
T ss_dssp SHHHHHHHHHHTTCCHHHHHHHTTCHHHHHHHHHHHHHHHHHTCCSS-SEE-EE-TT---EE--ECSCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCHHHHHHHHhChHHHHHHHHHHHHHHHcCCccC-CEE-EE-CC---EE--eeCCCCHHHHHHHHHH
Confidence 001457789999999 999 43 43 23 3788999999999987
Q ss_pred Hh
Q 023747 128 LL 129 (278)
Q Consensus 128 ~~ 129 (278)
.+
T Consensus 171 ~l 172 (175)
T 3gyk_A 171 AR 172 (175)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 405
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=97.85 E-value=0.00013 Score=58.30 Aligned_cols=93 Identities=9% Similarity=-0.010 Sum_probs=66.3
Q ss_pred cCCceEEEEEeCc-cc-hHHHHHHHHHHHHHhc----CceEEEEEeCCCc-------------------------ccchh
Q 023747 36 IDTLDMVYVFAKA-DD-LKSLLEPLEDIARNFK----GKIMFTAVDIADE-------------------------DLAKP 84 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~-c~~~~~~~~~la~~~~----~~v~f~~vd~~~~-------------------------~~~~~ 84 (278)
.+++++|.|+.+| ++ |....|.+.++..++. +.+.++.|+++.. +....
T Consensus 40 ~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~~ 119 (200)
T 2b7k_A 40 LGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPARDSPAVLKEYLSDFHPSILGLTGTFDEVKN 119 (200)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCTTTCCHHHHHHHHTTSCTTCEEEECCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCCCCCCHHHHHHHHHHcCCCceEEeCCHHHHHH
Confidence 3578999999999 87 9999999999888775 3588888887631 00136
Q ss_pred HHHHcCCC-CCCc---------------eEEEEecCCcceeecCCCCCChHHHHHHHHHHhc
Q 023747 85 FLTLFGLE-ESKN---------------TVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLH 130 (278)
Q Consensus 85 l~~~~~i~-~~~P---------------tl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 130 (278)
+++.|||. +. | ++ .+++..+...+.+.|..+.+.+.+.+.+.+.
T Consensus 120 ~~~~~gv~~~~-p~~~~~~~~~~~~~~~~~-~liD~~G~i~~~~~g~~~~~~~~~~i~~~l~ 179 (200)
T 2b7k_A 120 ACKKYRVYFST-PPNVKPGQDYLVDHSIFF-YLMDPEGQFVDALGRNYDEKTGVDKIVEHVK 179 (200)
T ss_dssp HHHHTTC---------------CTTTCCCE-EEECTTSCEEEEECTTCCTTHHHHHHHHHHH
T ss_pred HHHHcCcEEee-ccccCCCCCceeeecceE-EEECCCCcEEEEeCCCCCHHHHHHHHHHHHH
Confidence 88889987 33 4 66 5666555566667777787788888877764
No 406
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=97.83 E-value=4.9e-05 Score=60.20 Aligned_cols=92 Identities=12% Similarity=0.178 Sum_probs=70.1
Q ss_pred cCCceEEEEE-eCc-cchHHHHHHHHHHHHHhcC-ceEEEEEeCCCcc-------------------------cchhHHH
Q 023747 36 IDTLDMVYVF-AKA-DDLKSLLEPLEDIARNFKG-KIMFTAVDIADED-------------------------LAKPFLT 87 (278)
Q Consensus 36 ~~~~~~v~F~-~~~-~~c~~~~~~~~~la~~~~~-~v~f~~vd~~~~~-------------------------~~~~l~~ 87 (278)
.++++++.|| +.| ++|....|.+.+++++|++ .+.|+.|+.+... ....+++
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 109 (192)
T 2h01_A 30 GKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDISKSIAR 109 (192)
T ss_dssp TTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhHHhhCCccCCCcCeEECCcHHHHH
Confidence 3568899999 999 9999999999999999963 4888888876310 0147899
Q ss_pred HcCCC-----CCCceEEEEecCCcceeecCCCC----CChHHHHHHHHHHh
Q 023747 88 LFGLE-----ESKNTVVTAFDNKAISKFLLESD----LTPSNIEEFCSRLL 129 (278)
Q Consensus 88 ~~~i~-----~~~Ptl~~~~~~~~~~~~~~~g~----~~~~~i~~fi~~~~ 129 (278)
.||+. .. |++ .+++.++...+.+.|. .+.+++.+.++.+.
T Consensus 110 ~~gv~~~~g~~~-P~~-~liD~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 158 (192)
T 2h01_A 110 SYDVLFNESVAL-RAF-VLIDKQGVVQHLLVNNLALGRSVDEILRLIDALQ 158 (192)
T ss_dssp HTTCEETTTEEC-CEE-EEECTTSBEEEEEEGGGSSGGGHHHHHHHHHHHH
T ss_pred HhCCcCcCCcee-eEE-EEEcCCCEEEEEEeCCCCCCCCHHHHHHHHHHHh
Confidence 99999 78 999 7887655555544442 45788888888765
No 407
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=97.82 E-value=5.7e-05 Score=59.18 Aligned_cols=88 Identities=10% Similarity=0.128 Sum_probs=60.2
Q ss_pred CCcEEEEEE-CCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC----------------------CCCCCcC-
Q 023747 166 HKDVLLEVY-TPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH----------------------PKLQVEE- 220 (278)
Q Consensus 166 ~~~~~v~f~-~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~----------------------~~~~i~~- 220 (278)
+++++|.|| +.||++|....+.+.++...|+.. ++.+..|.++.. .. ..|++..
T Consensus 51 Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~-~~~vv~Vs~D~~~~~~~~~~~~~~~f~~l~D~~~~~~~~~gv~~~ 129 (179)
T 3ixr_A 51 NQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQI-NATVLGVSRDSVKSHDSFCAKQGFTFPLVSDSDAILCKAFDVIKE 129 (179)
T ss_dssp TSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTT-TEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTCHHHHHTTCEEE
T ss_pred CCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHcCCceEEEECCchHHHHHcCCccc
Confidence 678888888 999999999999999999999764 578888877642 11 1123321
Q ss_pred -----------CCeEEEEeCCCccCceEecC---CCCHHHHHHHHHHHh
Q 023747 221 -----------YPTLLFYPAGDKANPIKVSA---RSSSKNIAAFIKEQL 255 (278)
Q Consensus 221 -----------~Ptl~~f~~g~~~~~~~~~g---~~~~~~l~~~i~~~~ 255 (278)
.|+.+++...+.+ ...+.+ ....+++.+.|++..
T Consensus 130 ~~~~g~~~~~~~p~~~lID~~G~I-~~~~~~~~~~~~~~~il~~l~~l~ 177 (179)
T 3ixr_A 130 KTMYGRQVIGIERSTFLIGPTHRI-VEAWRQVKVPGHAEEVLNKLKAHA 177 (179)
T ss_dssp ECCC--CEEEECCEEEEECTTSBE-EEEECSCCSTTHHHHHHHHHHHHH
T ss_pred ccccCcccCCcceEEEEECCCCEE-EEEEcCCCCCCCHHHHHHHHHHHh
Confidence 5889999654444 223433 244577777776543
No 408
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=97.80 E-value=3.6e-05 Score=63.75 Aligned_cols=89 Identities=12% Similarity=0.106 Sum_probs=63.2
Q ss_pred CCCc-EEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC----------------------------CC-C
Q 023747 165 SHKD-VLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN----------------------------EH-P 214 (278)
Q Consensus 165 ~~~~-~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~----------------------------~~-~ 214 (278)
.++. +++.|+++||++|....+.+.+++.+|+.. ++.+..|+++.. ++ .
T Consensus 32 ~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~-gv~VI~VS~Ds~~~~~~w~~~~~~~~~~~i~fPil~D~~~~ia~ 110 (249)
T 3a2v_A 32 QGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRL-GVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVAR 110 (249)
T ss_dssp TTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHT-TEEEEEEESSCHHHHHHHHHHHHHHTCCCCCSCEEECTTSHHHH
T ss_pred CCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhC-CcEEEEEECCCHHHHHHHHHHHHHhcCCCCceeEEECCchHHHH
Confidence 3454 456789999999999999999999999753 588888888641 11 1
Q ss_pred CCCCc-------CCCeEEEEeCCCccCceEecCC----CCHHHHHHHHHHHh
Q 023747 215 KLQVE-------EYPTLLFYPAGDKANPIKVSAR----SSSKNIAAFIKEQL 255 (278)
Q Consensus 215 ~~~i~-------~~Ptl~~f~~g~~~~~~~~~g~----~~~~~l~~~i~~~~ 255 (278)
.|++. .+|+++++...+.+.. .+.|. ++.+++.+.|....
T Consensus 111 ~ygv~~~~~g~~~~p~~fIID~dG~I~~-~~~~~~~~gr~~~Ellr~I~alq 161 (249)
T 3a2v_A 111 RLGLLHAESATHTVRGVFIVDARGVIRT-MLYYPMELGRLVDEILRIVKALK 161 (249)
T ss_dssp HHTCCCTTCSSSCCEEEEEECTTSBEEE-EEEECTTBCCCHHHHHHHHHHHH
T ss_pred HhCCccccCCCcccceEEEECCCCeEEE-EEecCCcccchhHHHHHHHHHHH
Confidence 33555 8899999965554422 23332 57899999988655
No 409
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=97.80 E-value=0.00018 Score=57.85 Aligned_cols=43 Identities=16% Similarity=0.163 Sum_probs=36.6
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCC
Q 023747 165 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDAS 209 (278)
Q Consensus 165 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~ 209 (278)
.+++++|.||++||++| ...|.+.++..+|+.. .+.+..|+++
T Consensus 37 kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~-g~~vlgvs~d 79 (207)
T 2r37_A 37 AGKYVLFVNVASYGGLT-GQYIELNALQEELAPF-GLVILGFPCN 79 (207)
T ss_dssp TTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGG-TEEEEEEECC
T ss_pred CCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccC-CEEEEEEECc
Confidence 37899999999999999 5678999999999764 5888888754
No 410
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=97.79 E-value=0.00021 Score=55.40 Aligned_cols=94 Identities=7% Similarity=0.070 Sum_probs=67.3
Q ss_pred CCcEEEEEECCCCh-hHHHHHHHHHHHHHHhcCC-CceEEEEEeCCCCC-------------C--C--------------
Q 023747 166 HKDVLLEVYTPWCV-TCETTSKQIEKLAKHFKGL-DNLVIAKIDASANE-------------H--P-------------- 214 (278)
Q Consensus 166 ~~~~~v~f~~~~c~-~c~~~~~~~~~~a~~~~~~-~~~~~~~vd~~~~~-------------~--~-------------- 214 (278)
+++++|.||++||+ .|....+.+.++.+.+... .++.+..|.++..+ + .
T Consensus 28 Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~~~~~~~~~~~~~~~~w~~l~~~~~~~~~ 107 (170)
T 3me7_A 28 GKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLEDIKRFQKEYGIDGKGWKVVKAKTSEDLF 107 (170)
T ss_dssp TSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHHHHHHHHHHTTCCSSSEEEEEESSHHHHH
T ss_pred CCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHHHHHHHHHHcCCCCCCeEEEeCCCHHHHH
Confidence 78999999999997 6999999999999999642 25788877766210 0 0
Q ss_pred ----C---------CCCcCCCeEEEEeCCCccCceEecCC-CCHHHHHHHHHHHhcccCC
Q 023747 215 ----K---------LQVEEYPTLLFYPAGDKANPIKVSAR-SSSKNIAAFIKEQLKEKDQ 260 (278)
Q Consensus 215 ----~---------~~i~~~Ptl~~f~~g~~~~~~~~~g~-~~~~~l~~~i~~~~~~~~~ 260 (278)
. +++...|+++++...+.+ ...|.|. .+.+++.+.|.+.......
T Consensus 108 ~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i-~~~~~g~~~~~~~i~~~l~~~~~~~~~ 166 (170)
T 3me7_A 108 KLLDAIDFRFMTAGNDFIHPNVVVVLSPELQI-KDYIYGVNYNYLEFVNALRLARGEGHH 166 (170)
T ss_dssp HHHHHTTCCCEEETTEEECCCEEEEECTTSBE-EEEEESSSCCHHHHHHHHHHHTTCSCT
T ss_pred HHHHHCCeEEecCCCccccCceEEEECCCCeE-EEEEeCCCCCHHHHHHHHHHhhccccc
Confidence 0 113345788888555544 2245664 7899999999998876543
No 411
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=97.79 E-value=7.4e-05 Score=60.76 Aligned_cols=89 Identities=16% Similarity=0.202 Sum_probs=64.1
Q ss_pred CCCcEEEEEE-CCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-----------------------------
Q 023747 165 SHKDVLLEVY-TPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH----------------------------- 213 (278)
Q Consensus 165 ~~~~~~v~f~-~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~----------------------------- 213 (278)
.+++++|.|| ++||++|....|.+.++..+|+.. ++.+..|+.+.. ..
T Consensus 55 ~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~-~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~ 133 (221)
T 2c0d_A 55 GQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENK-NVELLGISVDSVYSHLAWKNMPIEKGGIGNVEFTLVSDINKDIS 133 (221)
T ss_dssp TTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHT-TEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSEEEECTTSHHH
T ss_pred CCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHhhhhcCccCCceEEEECCchHHH
Confidence 3679999999 999999999999999999999643 588888877642 00
Q ss_pred CCCCC-----cCCCeEEEEeCCCccCceEecC----CCCHHHHHHHHHHHh
Q 023747 214 PKLQV-----EEYPTLLFYPAGDKANPIKVSA----RSSSKNIAAFIKEQL 255 (278)
Q Consensus 214 ~~~~i-----~~~Ptl~~f~~g~~~~~~~~~g----~~~~~~l~~~i~~~~ 255 (278)
..|++ ..+|+.+++...+.+ ...+.| ..+.+++.+.|+...
T Consensus 134 ~~ygv~~~~g~~~P~~~lID~~G~I-~~~~~g~~~~~~~~~ell~~l~~L~ 183 (221)
T 2c0d_A 134 KNYNVLYDNSFALRGLFIIDKNGCV-RHQTVNDLPIGRNVQEVLRTIDSII 183 (221)
T ss_dssp HHTTCEETTTEECEEEEEECTTSBE-EEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HHcCCcccCCCccceEEEECCCCeE-EEEEecCCCCCCCHHHHHHHHHHHh
Confidence 01245 257999999655544 223333 357889999888765
No 412
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=97.79 E-value=0.00018 Score=55.37 Aligned_cols=90 Identities=11% Similarity=0.088 Sum_probs=66.5
Q ss_pred CCceEEEEEeCc--cchHHHHHHHHHHHHHhcCceEEEEEeCCCcc--------------------cchhHHHHcCCCC-
Q 023747 37 DTLDMVYVFAKA--DDLKSLLEPLEDIARNFKGKIMFTAVDIADED--------------------LAKPFLTLFGLEE- 93 (278)
Q Consensus 37 ~~~~~v~F~~~~--~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~--------------------~~~~l~~~~~i~~- 93 (278)
++++++.||++| ++|....|.+.+++++| ..+.|+.|+.+... ....+++.||+..
T Consensus 44 gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~v~~~ 122 (167)
T 2jsy_A 44 GKVTIISVIPSIDTGVCDAQTRRFNEEAAKL-GDVNVYTISADLPFAQARWCGANGIDKVETLSDHRDMSFGEAFGVYIK 122 (167)
T ss_dssp TSCEEEEECSCSTTSHHHHTHHHHHHHHHHH-SSCEEEEEECSSGGGTSCCGGGSSCTTEEEEEGGGTCHHHHHTTCBBT
T ss_pred CCeEEEEEecCCCCCchHHHHHHHHHHHHHc-CCCEEEEEECCCHHHHHHHHHhcCCCCceEeeCCchhHHHHHhCCccc
Confidence 568999999987 79999999999999999 55888888876311 1146888899886
Q ss_pred -----CCceEEEEecCCcceeecCCC-----CCChHHHHHHHHHHh
Q 023747 94 -----SKNTVVTAFDNKAISKFLLES-----DLTPSNIEEFCSRLL 129 (278)
Q Consensus 94 -----~~Ptl~~~~~~~~~~~~~~~g-----~~~~~~i~~fi~~~~ 129 (278)
. |+. .+++..+...+.+.| ..+.+++.+.+++++
T Consensus 123 ~~g~~~-p~~-~lid~~G~i~~~~~g~~~~~~~~~~~l~~~l~~ll 166 (167)
T 2jsy_A 123 ELRLLA-RSV-FVLDENGKVVYAEYVSEATNHPNYEKPIEAAKALV 166 (167)
T ss_dssp TTCSBC-CEE-EEECTTSCEEEEEECSBTTSCCCSHHHHHHHHHHH
T ss_pred cCCcee-eEE-EEEcCCCcEEEEEecCCcCCCCCHHHHHHHHHHhh
Confidence 4 888 677655555555433 235678888887654
No 413
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=97.74 E-value=0.00014 Score=59.08 Aligned_cols=91 Identities=8% Similarity=0.092 Sum_probs=68.3
Q ss_pred cCCceEEEEEe-Cc-cchHHHHHHHHHHHHHhcCc-eEEEEEeCCCcc-------------------------cchhHHH
Q 023747 36 IDTLDMVYVFA-KA-DDLKSLLEPLEDIARNFKGK-IMFTAVDIADED-------------------------LAKPFLT 87 (278)
Q Consensus 36 ~~~~~~v~F~~-~~-~~c~~~~~~~~~la~~~~~~-v~f~~vd~~~~~-------------------------~~~~l~~ 87 (278)
.+++++|.||+ .| ++|....|.+.+++++|+++ +.|+.|+++... ....+++
T Consensus 68 ~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 147 (222)
T 3ztl_A 68 RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEISK 147 (222)
T ss_dssp TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTSCCSCSSCEEECSSSHHHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhhccccccceeEEeCCchHHHH
Confidence 34688999996 99 99999999999999999764 888888887421 0146888
Q ss_pred HcCCC------CCCceEEEEecCCcceeecCCCC----CChHHHHHHHHHH
Q 023747 88 LFGLE------ESKNTVVTAFDNKAISKFLLESD----LTPSNIEEFCSRL 128 (278)
Q Consensus 88 ~~~i~------~~~Ptl~~~~~~~~~~~~~~~g~----~~~~~i~~fi~~~ 128 (278)
.|++. .+ |+. .+++..+...+.+.|. ...+++.+.++..
T Consensus 148 ~ygv~~~~~g~~~-P~~-~lID~~G~I~~~~~g~~~~~~~~~~il~~l~~l 196 (222)
T 3ztl_A 148 AYGVFDEEDGNAF-RGL-FIIDPNGILRQITINDKPVGRSVDETLRLLDAF 196 (222)
T ss_dssp HTTCBCTTTSSBC-EEE-EEECTTSEEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HcCCeecCCCCcc-ceE-EEECCCCeEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 99998 77 999 7777665555554343 4567777777654
No 414
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=97.73 E-value=0.00015 Score=58.49 Aligned_cols=88 Identities=11% Similarity=0.118 Sum_probs=63.5
Q ss_pred CCcEEEEEE-CCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCC-C----C-------------------------
Q 023747 166 HKDVLLEVY-TPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASANE-H----P------------------------- 214 (278)
Q Consensus 166 ~~~~~v~f~-~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~~-~----~------------------------- 214 (278)
+++++|.|| ++||++|....+.+.++..+|+.. ++.+..|+++..+ . .
T Consensus 48 Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~-~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 126 (211)
T 2pn8_A 48 GKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSI-NTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISK 126 (211)
T ss_dssp TSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTT-TEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHHH
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHHHHhhhccCccCCceEEEECCchHHHH
Confidence 678999999 999999999999999999999753 5888888775421 0 0
Q ss_pred CCCCc------CCCeEEEEeCCCccCceEecC----CCCHHHHHHHHHHHh
Q 023747 215 KLQVE------EYPTLLFYPAGDKANPIKVSA----RSSSKNIAAFIKEQL 255 (278)
Q Consensus 215 ~~~i~------~~Ptl~~f~~g~~~~~~~~~g----~~~~~~l~~~i~~~~ 255 (278)
.|++. .+|+.+++...+.+ ...+.| ..+.+++.+.|+...
T Consensus 127 ~ygv~~~~~g~~~p~~~lID~~G~I-~~~~~g~~~~~~~~~ell~~l~~l~ 176 (211)
T 2pn8_A 127 DYGVYLEDSGHTLRGLFIIDDKGIL-RQITLNDLPVGRSVDETLRLVQAFQ 176 (211)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBE-EEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HcCCcccCCCcccceEEEECCCCEE-EEEEecCCCCCCCHHHHHHHHHHhh
Confidence 12442 48999999655544 223333 247788999888765
No 415
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=97.72 E-value=5.2e-05 Score=52.68 Aligned_cols=75 Identities=17% Similarity=0.256 Sum_probs=54.6
Q ss_pred EEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-C---C--CCCcCCCeEEEEeCCCccCceEecCC
Q 023747 169 VLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-P---K--LQVEEYPTLLFYPAGDKANPIKVSAR 241 (278)
Q Consensus 169 ~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~---~--~~i~~~Ptl~~f~~g~~~~~~~~~g~ 241 (278)
.++.|..+||++|......+.+. ++.|-.+|++.+ +. . + .+..++|++++ .+|.. -..
T Consensus 5 ~I~vYs~~~Cp~C~~aK~~L~~~--------gi~y~~idi~~d~~~~~~~~~~~~G~~tVP~I~i-~Dg~~------l~~ 69 (92)
T 2lqo_A 5 ALTIYTTSWCGYCLRLKTALTAN--------RIAYDEVDIEHNRAAAEFVGSVNGGNRTVPTVKF-ADGST------LTN 69 (92)
T ss_dssp CEEEEECTTCSSHHHHHHHHHHT--------TCCCEEEETTTCHHHHHHHHHHSSSSSCSCEEEE-TTSCE------EES
T ss_pred cEEEEcCCCCHhHHHHHHHHHhc--------CCceEEEEcCCCHHHHHHHHHHcCCCCEeCEEEE-eCCEE------EeC
Confidence 47789999999999987776552 477788898877 32 2 2 26778999764 45532 225
Q ss_pred CCHHHHHHHHHHHhccc
Q 023747 242 SSSKNIAAFIKEQLKEK 258 (278)
Q Consensus 242 ~~~~~l~~~i~~~~~~~ 258 (278)
.+.++|.++|.+..|..
T Consensus 70 ~~~~el~~~L~el~gL~ 86 (92)
T 2lqo_A 70 PSADEVKAKLVKIAGLE 86 (92)
T ss_dssp CCHHHHHHHHHHHHCCS
T ss_pred CCHHHHHHHHHHhcCCc
Confidence 68899999999988754
No 416
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=97.69 E-value=6.8e-05 Score=60.72 Aligned_cols=84 Identities=11% Similarity=0.050 Sum_probs=60.9
Q ss_pred cCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCC-------------------------------------
Q 023747 36 IDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIA------------------------------------- 77 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~------------------------------------- 77 (278)
..+++++.|+++| ++|+++.|.+.++++. .+.+..+...
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~---~v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~~ 161 (216)
T 1eej_A 85 QEKHVITVFTDITCGYCHKLHEQMADYNAL---GITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKSVAPA 161 (216)
T ss_dssp TCCEEEEEEECTTCHHHHHHHTTHHHHHHT---TEEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHTTCCCCCC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHhC---CcEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHhCCCCChh
Confidence 4567899999999 9999999999998764 3555544321
Q ss_pred ---C-cccchhHHHHcCCCCCCceEEEEecCCcceeecCCCCCChHHHHHHHHHHh
Q 023747 78 ---D-EDLAKPFLTLFGLEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLL 129 (278)
Q Consensus 78 ---~-~~~~~~l~~~~~i~~~~Ptl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 129 (278)
. -+....+++++||.+. ||+ .+.+ + .. +.|..+.+.|.++++...
T Consensus 162 ~~~~~v~~~~~l~~~~gV~gt-Pt~-v~~d-G--~~--~~G~~~~~~l~~~l~~~~ 210 (216)
T 1eej_A 162 SCDVDIADHYALGVQLGVSGT-PAV-VLSN-G--TL--VPGYQPPKEMKEFLDEHQ 210 (216)
T ss_dssp CCSCCHHHHHHHHHHHTCCSS-SEE-ECTT-S--CE--EESCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCcc-CEE-EEcC-C--eE--ecCCCCHHHHHHHHHHhh
Confidence 0 0112568899999999 999 4434 3 12 368888999999998754
No 417
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=97.69 E-value=8.2e-05 Score=58.68 Aligned_cols=107 Identities=8% Similarity=0.082 Sum_probs=70.3
Q ss_pred CCcEEEEEEC-CCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCC-C----C----------------------CCC
Q 023747 166 HKDVLLEVYT-PWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASANE-H----P----------------------KLQ 217 (278)
Q Consensus 166 ~~~~~v~f~~-~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~~-~----~----------------------~~~ 217 (278)
+++++|.||+ +||++|....+.+.++...|+.. ++.+..|..+..+ . . .|+
T Consensus 30 Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~-~v~vv~Is~d~~~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~yg 108 (186)
T 1n8j_A 30 GRWSVFFFYPADFTFVSPTELGDVADHYEELQKL-GVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFD 108 (186)
T ss_dssp TSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHT-TEEEEEEESSCHHHHHHHHHHCTTGGGCCSEEEECTTSHHHHHTT
T ss_pred CCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHHHHcCcccCCceeEEECCchHHHHHhC
Confidence 6889999995 99999999999999999998753 5888888775321 0 0 123
Q ss_pred Cc------CCCeEEEEeCCCccCceEecCC----CCHHHHHHHHHHHhccc--CCCCchhhhhhhccCC
Q 023747 218 VE------EYPTLLFYPAGDKANPIKVSAR----SSSKNIAAFIKEQLKEK--DQSPKDEQWKEKDQAP 274 (278)
Q Consensus 218 i~------~~Ptl~~f~~g~~~~~~~~~g~----~~~~~l~~~i~~~~~~~--~~~~~~~~~~~~~~~~ 274 (278)
+. ..|+.+++...+.+ ...+.|. .+.+++.+.|+...... +...--..|+.|+..+
T Consensus 109 v~~~~~g~~~p~~~lID~~G~i-~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~p~~~~p~~w~~~~~~~ 176 (186)
T 1n8j_A 109 NMREDEGLADRATFVVDPQGII-QAIEVTAEGIGRDASDLLRKIKAAQYVAAHPGEVCPAKWKEGEATL 176 (186)
T ss_dssp CEETTTTEECEEEEEECTTSBE-EEEEEECTTBCCCHHHHHHHHHHHHHHHHSTTCBBCTTCCTTSCCB
T ss_pred CccCCCCceeeEEEEECCCCeE-EEEEecCCCCCCCHHHHHHHHHHHHHHhhcCCCccCCCCCCCCccc
Confidence 43 26999999655544 2244443 36888998888765421 1222235566655443
No 418
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=97.64 E-value=0.00026 Score=54.60 Aligned_cols=93 Identities=5% Similarity=-0.001 Sum_probs=65.5
Q ss_pred cCCceEEEEEeCc-c-chHHHHHHHHHHHHHhcC---ceEEEEEeCCCc--c--c---------------------chhH
Q 023747 36 IDTLDMVYVFAKA-D-DLKSLLEPLEDIARNFKG---KIMFTAVDIADE--D--L---------------------AKPF 85 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~-~c~~~~~~~~~la~~~~~---~v~f~~vd~~~~--~--~---------------------~~~l 85 (278)
.+++++|.||++| + +|....+.+.+++++|++ .+.|+.|+++.. + . ...+
T Consensus 32 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~~~~~~~~~~~~~~~~~l~d~~~~~ 111 (174)
T 1xzo_A 32 KGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQLKKFAANYPLSFDNWDFLTGYSQSE 111 (174)
T ss_dssp TTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTSCCCGGGEEEEBCSCHHH
T ss_pred CCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCCcceEEEeCCCHHH
Confidence 3578999999999 7 899999999999999874 388999888621 0 0 0122
Q ss_pred HHHc----------------CCCCCCceEEEEecCCcceeecCCCCC--ChHHHHHHHHHHhc
Q 023747 86 LTLF----------------GLEESKNTVVTAFDNKAISKFLLESDL--TPSNIEEFCSRLLH 130 (278)
Q Consensus 86 ~~~~----------------~i~~~~Ptl~~~~~~~~~~~~~~~g~~--~~~~i~~fi~~~~~ 130 (278)
.+.| ++... |++ .+++..+...+.+.|.. +.++|.+.++.+++
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~-p~~-~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll~ 172 (174)
T 1xzo_A 112 IEEFALKSFKAIVKKPEGEDQVIHQ-SSF-YLVGPDGKVLKDYNGVENTPYDDIISDVKSAST 172 (174)
T ss_dssp HHHHHHHHHCCCCCCCSSCCSCCSC-CEE-EEECTTSEEEEEEESSSSCCHHHHHHHHHHHTC
T ss_pred HHHHHHhhcCeeEeecCCCCeeeee-eEE-EEECCCCeEEEEEcCCCCCCHHHHHHHHHHHHh
Confidence 2222 34455 887 67766555566566664 57899999988764
No 419
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=97.64 E-value=0.00024 Score=54.31 Aligned_cols=90 Identities=4% Similarity=-0.004 Sum_probs=64.3
Q ss_pred CCceEEEEEe-Cc-cchHHHHHHHHHHHHHhcCc-eEEEEEeCCCccc------------------chhHHHHcCCCC--
Q 023747 37 DTLDMVYVFA-KA-DDLKSLLEPLEDIARNFKGK-IMFTAVDIADEDL------------------AKPFLTLFGLEE-- 93 (278)
Q Consensus 37 ~~~~~v~F~~-~~-~~c~~~~~~~~~la~~~~~~-v~f~~vd~~~~~~------------------~~~l~~~~~i~~-- 93 (278)
++++++.||. .| ++|....|.+.++.++|++. +.++.|.++.... ...+++.||+..
T Consensus 35 gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~ 114 (163)
T 3gkn_A 35 GHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRDSVKSHDNFCAKQGFAFPLVSDGDEALCRAFDVIKEK 114 (163)
T ss_dssp TSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHCCSSCEEECTTCHHHHHTTCEEEE
T ss_pred CCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHhCCcccc
Confidence 4578999997 88 99999999999999999754 8888887763211 246778888876
Q ss_pred ----------CCceEEEEecCCcceeecCCCC---CChHHHHHHHHHH
Q 023747 94 ----------SKNTVVTAFDNKAISKFLLESD---LTPSNIEEFCSRL 128 (278)
Q Consensus 94 ----------~~Ptl~~~~~~~~~~~~~~~g~---~~~~~i~~fi~~~ 128 (278)
. |+. .+++..+...+.+.+. ...+++.+.++.+
T Consensus 115 ~~~~~~~~~~~-p~~-~lid~~G~i~~~~~~~~~~~~~~~il~~l~~l 160 (163)
T 3gkn_A 115 NMYGKQVLGIE-RST-FLLSPEGQVVQAWRKVKVAGHADAVLAALKAH 160 (163)
T ss_dssp EETTEEEEEEC-CEE-EEECTTSCEEEEECSCCSTTHHHHHHHHHHHH
T ss_pred ccccccccCcc-eEE-EEECCCCeEEEEEcCCCcccCHHHHHHHHHHH
Confidence 7 998 7777665555555443 3345666666553
No 420
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=97.63 E-value=0.00069 Score=52.51 Aligned_cols=46 Identities=15% Similarity=0.230 Sum_probs=37.3
Q ss_pred CCCcEEEEEECCCCh-hHHHHHHHHHHHHHHhcCCC-ceEEEEEeCCC
Q 023747 165 SHKDVLLEVYTPWCV-TCETTSKQIEKLAKHFKGLD-NLVIAKIDASA 210 (278)
Q Consensus 165 ~~~~~~v~f~~~~c~-~c~~~~~~~~~~a~~~~~~~-~~~~~~vd~~~ 210 (278)
.+++++|.||.+||+ .|....+.+.++.+.++... ++.++.|.+|.
T Consensus 31 ~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvDp 78 (170)
T 4hde_A 31 KGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVDP 78 (170)
T ss_dssp TTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESCT
T ss_pred CCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecCc
Confidence 478999999999996 79998999998888885433 58888887764
No 421
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=97.63 E-value=1.8e-05 Score=57.40 Aligned_cols=59 Identities=12% Similarity=0.183 Sum_probs=41.0
Q ss_pred CcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCC--------C-CCCCCcCCCeEEEEeCCCc
Q 023747 167 KDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASANE--------H-PKLQVEEYPTLLFYPAGDK 232 (278)
Q Consensus 167 ~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~~--------~-~~~~i~~~Ptl~~f~~g~~ 232 (278)
...++.|+++||++|+.+.+.+.+++... + + +..+|++.+. + ..+++.++|++++ +|+.
T Consensus 18 ~~~vv~f~~~~Cp~C~~~~~~L~~~~~~~-~--~--~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~v~i--~g~~ 85 (114)
T 2hze_A 18 NNKVTIFVKYTCPFCRNALDILNKFSFKR-G--A--YEIVDIKEFKPENELRDYFEQITGGKTVPRIFF--GKTS 85 (114)
T ss_dssp TTCEEEEECTTCHHHHHHHHHHTTSCBCT-T--S--EEEEEGGGSSSHHHHHHHHHHHHSCCSSCEEEE--TTEE
T ss_pred cCCEEEEEeCCChhHHHHHHHHHHcCCCc-C--c--eEEEEccCCCChHHHHHHHHHHhCCCCcCEEEE--CCEE
Confidence 44688899999999999988877643221 1 2 6677776552 3 3568999998754 6653
No 422
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=97.57 E-value=0.00038 Score=57.27 Aligned_cols=88 Identities=11% Similarity=0.155 Sum_probs=63.3
Q ss_pred CCcEEEEEEC-CCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-----------------------------C
Q 023747 166 HKDVLLEVYT-PWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-----------------------------P 214 (278)
Q Consensus 166 ~~~~~v~f~~-~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-----------------------------~ 214 (278)
+++++|.||+ .||++|....+.+.++...|+.. ++.+..|.++.. .. .
T Consensus 77 Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~-gv~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~fp~l~D~~~~v~~ 155 (240)
T 3qpm_A 77 GKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAI-NTEVVACSVDSQFTHLAWIITPRKQGGLGPMKIPLLSDLTHQISK 155 (240)
T ss_dssp TSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTT-TEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHHHH
T ss_pred CCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHHHHHHhhcCCCCCceeEEeCchHHHHH
Confidence 6899999999 99999999999999999999764 588888887642 10 0
Q ss_pred CCCCc------CCCeEEEEeCCCccCceEecC----CCCHHHHHHHHHHHh
Q 023747 215 KLQVE------EYPTLLFYPAGDKANPIKVSA----RSSSKNIAAFIKEQL 255 (278)
Q Consensus 215 ~~~i~------~~Ptl~~f~~g~~~~~~~~~g----~~~~~~l~~~i~~~~ 255 (278)
.|++. .+|+.+++...+.+. ..+.+ ..+.+++++.|+..-
T Consensus 156 ~ygv~~~~~g~~~p~~flID~~G~I~-~~~~~~~~~~~~~~eil~~l~~lq 205 (240)
T 3qpm_A 156 DYGVYLEDQGHTLRGLFIIDEKGVLR-QITMNDLPVGRSVDETLRLVQAFQ 205 (240)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBEE-EEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HhCCccccCCCccceEEEEcCCCeEE-EEEecCCCCCCCHHHHHHHHHHhh
Confidence 12444 579999996555442 23222 356788888887654
No 423
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=97.55 E-value=0.00014 Score=57.61 Aligned_cols=43 Identities=21% Similarity=0.362 Sum_probs=38.9
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCC
Q 023747 165 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDAS 209 (278)
Q Consensus 165 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~ 209 (278)
.++.+++.|+++||++|+.+.+.+.++.+.+.+ ++.|..+++.
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~--~v~~~~~~~~ 66 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQ--DVVLKQVPIA 66 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCT--TEEEEEEECC
T ss_pred CCCeEEEEEECCCCccHHHhhHHHHHHHHHCCC--CeEEEEEecc
Confidence 467899999999999999999999999999876 6899999885
No 424
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=97.54 E-value=0.00027 Score=56.90 Aligned_cols=82 Identities=11% Similarity=0.138 Sum_probs=59.2
Q ss_pred cCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCc-----------------------------------
Q 023747 36 IDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADE----------------------------------- 79 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~----------------------------------- 79 (278)
..++.++.|+.+| ++|+++.|.++++.+. + +.+..+...-.
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~~--~-v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~~~~~~ 161 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYNDL--G-ITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNLPKEV 161 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHHHT--T-EEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTCCCSSC
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHhC--C-cEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCCCCChH
Confidence 4567899999999 9999999999997763 3 55554432100
Q ss_pred ------ccchhHHHHcCCCCCCceEEEEecCCcceeecCCCCCChHHHHHHHHH
Q 023747 80 ------DLAKPFLTLFGLEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSR 127 (278)
Q Consensus 80 ------~~~~~l~~~~~i~~~~Ptl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~ 127 (278)
+....+++++||.+. ||+ .+.+|. .+.|..+.+.|.++++.
T Consensus 162 ~~~~~v~~~~~l~~~~gV~gT-Pt~-vi~nG~-----~~~G~~~~~~l~~~l~~ 208 (211)
T 1t3b_A 162 KTPNIVKKHYELGIQFGVRGT-PSI-VTSTGE-----LIGGYLKPADLLRALEE 208 (211)
T ss_dssp CCSSHHHHHHHHHHHHTCCSS-CEE-ECTTSC-----CCCSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCcC-CEE-EEeCCE-----EecCCCCHHHHHHHHHh
Confidence 011567899999999 999 443332 24688899999999876
No 425
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=97.52 E-value=7.5e-05 Score=51.26 Aligned_cols=53 Identities=19% Similarity=0.372 Sum_probs=39.0
Q ss_pred EEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCC--CC-CC-CCC-CCcCCCeEEEEeCCC
Q 023747 169 VLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDAS--AN-EH-PKL-QVEEYPTLLFYPAGD 231 (278)
Q Consensus 169 ~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~--~~-~~-~~~-~i~~~Ptl~~f~~g~ 231 (278)
.++.|+++||++|+.+.+.+.+. .+.+..+|++ .. ++ ..+ ++.++|++++ +|+
T Consensus 7 ~v~~y~~~~C~~C~~~~~~L~~~--------~i~~~~vdv~~~~~~~l~~~~~~~~~vP~l~~--~g~ 64 (89)
T 2klx_A 7 EIILYTRPNCPYCKRARDLLDKK--------GVKYTDIDASTSLRQEMVQRANGRNTFPQIFI--GDY 64 (89)
T ss_dssp CEEEESCSCCTTTHHHHHHHHHH--------TCCEEEECSCHHHHHHHHHHHHSSCCSCEEEE--TTE
T ss_pred eEEEEECCCChhHHHHHHHHHHc--------CCCcEEEECCHHHHHHHHHHhCCCCCcCEEEE--CCE
Confidence 36789999999999998888765 2456677877 22 33 356 8999999853 654
No 426
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=97.51 E-value=8.4e-05 Score=51.30 Aligned_cols=67 Identities=10% Similarity=0.096 Sum_probs=46.3
Q ss_pred EEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC----------CC-CCCCCcCCCeEEEEeCCCccCceEe
Q 023747 170 LLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN----------EH-PKLQVEEYPTLLFYPAGDKANPIKV 238 (278)
Q Consensus 170 ~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~----------~~-~~~~i~~~Ptl~~f~~g~~~~~~~~ 238 (278)
++.|+++||++|+.+...+.+++ +.+-.+|++.. ++ ..+++.++|++++ +|+ .
T Consensus 14 v~ly~~~~Cp~C~~~~~~L~~~g--------i~~~~~~v~~~~~~~~~~~~~~l~~~~g~~~vP~l~~--~g~------~ 77 (92)
T 3ic4_A 14 VLMYGLSTCPHCKRTLEFLKREG--------VDFEVIWIDKLEGEERKKVIEKVHSISGSYSVPVVVK--GDK------H 77 (92)
T ss_dssp SEEEECTTCHHHHHHHHHHHHHT--------CCCEEEEGGGCCHHHHHHHHHHHHHHHSSSCSCEEEE--TTE------E
T ss_pred EEEEECCCChHHHHHHHHHHHcC--------CCcEEEEeeeCCccchHHHHHHHHHhcCCCCcCEEEE--CCE------E
Confidence 67799999999999988887763 22334554421 11 2457889999987 553 2
Q ss_pred cCCCCHHHHHHHHH
Q 023747 239 SARSSSKNIAAFIK 252 (278)
Q Consensus 239 ~g~~~~~~l~~~i~ 252 (278)
.+..+.+.|.++|+
T Consensus 78 i~G~~~~~l~~~l~ 91 (92)
T 3ic4_A 78 VLGYNEEKLKELIR 91 (92)
T ss_dssp EESCCHHHHHHHHH
T ss_pred EeCCCHHHHHHHhc
Confidence 34568899998875
No 427
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=97.50 E-value=3e-05 Score=59.51 Aligned_cols=45 Identities=20% Similarity=0.341 Sum_probs=31.7
Q ss_pred CCCcEEEEEE-CCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCC
Q 023747 165 SHKDVLLEVY-TPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA 210 (278)
Q Consensus 165 ~~~~~~v~f~-~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~ 210 (278)
.++.++|.|| ++||++|....+.+.++..+++.. .+.+..|+.+.
T Consensus 29 ~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~-~~~~v~vs~d~ 74 (157)
T 4g2e_A 29 KGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQV-NAVVLGISVDP 74 (157)
T ss_dssp TTSCEEEEECSCTTCCC------CCSCGGGGGGGC-SSEEEEEESSC
T ss_pred CCCeEEEEecCCCCCCccccchhhccccccccccc-CceEeeecccc
Confidence 3688999998 999999999999999998888764 57777777664
No 428
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=97.46 E-value=6.1e-05 Score=54.91 Aligned_cols=56 Identities=14% Similarity=0.277 Sum_probs=39.7
Q ss_pred EEEEECCCChhHHHH-HHHHHHHHHHhcCCCceEEEEEeCCCCC--------C-CCCCCcCCCeEEEEeCCCc
Q 023747 170 LLEVYTPWCVTCETT-SKQIEKLAKHFKGLDNLVIAKIDASANE--------H-PKLQVEEYPTLLFYPAGDK 232 (278)
Q Consensus 170 ~v~f~~~~c~~c~~~-~~~~~~~a~~~~~~~~~~~~~vd~~~~~--------~-~~~~i~~~Ptl~~f~~g~~ 232 (278)
++.|+++||++|+.+ .+.+.+.+. ..+.+..+|++.+. + ..+++.++|++ |.+|+.
T Consensus 27 Vvvf~~~~Cp~C~~alk~~L~~~~~-----~~i~~~~vdid~~~~~~~~~~~l~~~~g~~tvP~v--fi~g~~ 92 (118)
T 3c1r_A 27 IFVASKTYCPYCHAALNTLFEKLKV-----PRSKVLVLQLNDMKEGADIQAALYEINGQRTVPNI--YINGKH 92 (118)
T ss_dssp EEEEECSSCHHHHHHHHHHHTTSCC-----CGGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--EETTEE
T ss_pred EEEEEcCCCcCHHHHHHHHHHHcCC-----CCCCeEEEECccCCChHHHHHHHHHHhCCCCcCEE--EECCEE
Confidence 667999999999998 777765441 13667777877652 3 25688999987 446653
No 429
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=97.45 E-value=0.00027 Score=49.95 Aligned_cols=71 Identities=17% Similarity=0.210 Sum_probs=48.3
Q ss_pred CCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC------CC-C----CCCCcCCCeEEEEeCCCccC
Q 023747 166 HKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN------EH-P----KLQVEEYPTLLFYPAGDKAN 234 (278)
Q Consensus 166 ~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~------~~-~----~~~i~~~Ptl~~f~~g~~~~ 234 (278)
++..+++|+++||++|+.+.+.+.+.+ +.+-.+|++.. +. . ..+..++|++++ +|+
T Consensus 20 ~~~~v~ly~~~~Cp~C~~ak~~L~~~~--------i~y~~vdI~~~~~~~~~~~~~~l~~~~g~~~vP~l~i--~~~--- 86 (103)
T 3nzn_A 20 DRGKVIMYGLSTCVWCKKTKKLLTDLG--------VDFDYVYVDRLEGKEEEEAVEEVRRFNPSVSFPTTII--NDE--- 86 (103)
T ss_dssp CCSCEEEEECSSCHHHHHHHHHHHHHT--------BCEEEEEGGGCCHHHHHHHHHHHHHHCTTCCSCEEEE--TTT---
T ss_pred CCCeEEEEcCCCCchHHHHHHHHHHcC--------CCcEEEEeeccCcccHHHHHHHHHHhCCCCccCEEEE--CCC---
Confidence 445677899999999999998887753 33444555431 11 1 147899999886 442
Q ss_pred ceEecCCCCHHHHHHHH
Q 023747 235 PIKVSARSSSKNIAAFI 251 (278)
Q Consensus 235 ~~~~~g~~~~~~l~~~i 251 (278)
.+.|..+.+.|.++|
T Consensus 87 --~~igg~~~~~l~~~L 101 (103)
T 3nzn_A 87 --KAIVGFKEKEIRESL 101 (103)
T ss_dssp --EEEESCCHHHHHHHT
T ss_pred --EEEEcCCHHHHHHHh
Confidence 345678888887765
No 430
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=97.41 E-value=0.00014 Score=51.24 Aligned_cols=56 Identities=7% Similarity=0.095 Sum_probs=41.0
Q ss_pred CCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCC-----CCcCCCeEEEEeCCC
Q 023747 166 HKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKL-----QVEEYPTLLFYPAGD 231 (278)
Q Consensus 166 ~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~~~-----~i~~~Ptl~~f~~g~ 231 (278)
...-+++|+++||++|+.+...+.+. .+.+..+|++.+ +. .++ +..++|+++ -+|+
T Consensus 14 ~~~~v~vy~~~~Cp~C~~ak~~L~~~--------~i~y~~idI~~~~~~~~~l~~~~~g~~~vP~if--i~g~ 76 (99)
T 3qmx_A 14 VSAKIEIYTWSTCPFCMRALALLKRK--------GVEFQEYCIDGDNEAREAMAARANGKRSLPQIF--IDDQ 76 (99)
T ss_dssp CCCCEEEEECTTCHHHHHHHHHHHHH--------TCCCEEEECTTCHHHHHHHHHHTTTCCCSCEEE--ETTE
T ss_pred CCCCEEEEEcCCChhHHHHHHHHHHC--------CCCCEEEEcCCCHHHHHHHHHHhCCCCCCCEEE--ECCE
Confidence 45567889999999999999888875 255667787776 33 222 788999884 4664
No 431
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=97.41 E-value=0.00047 Score=54.52 Aligned_cols=43 Identities=19% Similarity=0.265 Sum_probs=38.6
Q ss_pred ecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCC
Q 023747 35 QIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIA 77 (278)
Q Consensus 35 ~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~ 77 (278)
...++.++.|+.+| ++|..+.|.+.++.+.+.+++.|..++..
T Consensus 23 ~~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~~~~ 66 (195)
T 3hd5_A 23 TPGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQDVVLKQVPIA 66 (195)
T ss_dssp STTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCTTEEEEEEECC
T ss_pred CCCCeEEEEEECCCCccHHHhhHHHHHHHHHCCCCeEEEEEecc
Confidence 34567899999999 99999999999999999988999988885
No 432
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.40 E-value=0.00011 Score=54.43 Aligned_cols=83 Identities=6% Similarity=0.153 Sum_probs=50.2
Q ss_pred cchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC----C----C-CCCCCcCCCeEEE
Q 023747 156 KTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN----E----H-PKLQVEEYPTLLF 226 (278)
Q Consensus 156 ~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~----~----~-~~~~i~~~Ptl~~ 226 (278)
+.+.+.+.. + . +++|+++||++|+.+.+.+.++. +.+..+|++.. + + ..+++..+|+++
T Consensus 18 ~~~~~~i~~-~-~-vvvf~~~~Cp~C~~~~~~L~~~~--------i~~~~vdid~~~~~~~~~~~l~~~~g~~~vP~l~- 85 (130)
T 2cq9_A 18 NQIQETISD-N-C-VVIFSKTSCSYCTMAKKLFHDMN--------VNYKVVELDLLEYGNQFQDALYKMTGERTVPRIF- 85 (130)
T ss_dssp HHHHHHHHH-S-S-EEEEECSSCSHHHHHHHHHHHHT--------CCCEEEETTTSTTHHHHHHHHHHHHSSCCSSEEE-
T ss_pred HHHHHHHcC-C-c-EEEEEcCCChHHHHHHHHHHHcC--------CCcEEEECcCCcCcHHHHHHHHHHhCCCCcCEEE-
Confidence 445555432 2 3 45599999999999999888763 33455666644 1 3 256899999984
Q ss_pred EeCCCccCceEec---CCCCHHHHHHHHHH
Q 023747 227 YPAGDKANPIKVS---ARSSSKNIAAFIKE 253 (278)
Q Consensus 227 f~~g~~~~~~~~~---g~~~~~~l~~~i~~ 253 (278)
.+|+.+. .+. +......|.++|+.
T Consensus 86 -i~G~~ig--g~~~l~~~~~~~~L~~~L~~ 112 (130)
T 2cq9_A 86 -VNGTFIG--GATDTHRLHKEGKLLPLVHQ 112 (130)
T ss_dssp -ETTEEEE--EHHHHHHHHHHTSSHHHHHH
T ss_pred -ECCEEEc--ChHHHHHHHHcCcHHHHHHH
Confidence 3665332 221 11233456666655
No 433
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=97.38 E-value=0.00026 Score=56.17 Aligned_cols=43 Identities=23% Similarity=0.408 Sum_probs=38.4
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCC
Q 023747 165 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDAS 209 (278)
Q Consensus 165 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~ 209 (278)
.++..+|.|+++||++|+.+.|.+.++.+.+.+ ++.|..+.+.
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~--~v~~~~~p~~ 65 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKD--DMYLRTEHVV 65 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCT--TEEEEEEECC
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHCCC--CeEEEEecCC
Confidence 357899999999999999999999999998877 6999888875
No 434
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.38 E-value=0.00082 Score=52.60 Aligned_cols=91 Identities=9% Similarity=0.142 Sum_probs=66.5
Q ss_pred cCCCcEEEEEECCCChhHHHHHHHH---HHHHHHhcCCCceEEEEEeCCCCC----------------C----CCCCCcC
Q 023747 164 NSHKDVLLEVYTPWCVTCETTSKQI---EKLAKHFKGLDNLVIAKIDASANE----------------H----PKLQVEE 220 (278)
Q Consensus 164 ~~~~~~~v~f~~~~c~~c~~~~~~~---~~~a~~~~~~~~~~~~~vd~~~~~----------------~----~~~~i~~ 220 (278)
...|..+|+++++||..|..+.... ..+..-++. ++.+..+|++..+ . ..+++.+
T Consensus 53 ~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~~--nfV~w~~dv~~~e~~~~~~~~~~~~~g~~~a~~~~~~~~~~ 130 (178)
T 2ec4_A 53 RDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQ--NFITWAWDLTKDSNRARFLTMCNRHFGSVVAQTIRTQKTDQ 130 (178)
T ss_dssp TTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHHH--TEEEEEEECCSHHHHHHHHHHHHHHTCHHHHHHHHHSCSTT
T ss_pred hhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHHc--CEEEEEEeCCCchhhhhhhhhhhhhhHHHHHHHHhhcCCCC
Confidence 3478899999999999999886443 346666665 6889999988654 1 1278999
Q ss_pred CCeEEEEeC-CCccC-ceEecCCCCHHHHHHHHHHHhc
Q 023747 221 YPTLLFYPA-GDKAN-PIKVSARSSSKNIAAFIKEQLK 256 (278)
Q Consensus 221 ~Ptl~~f~~-g~~~~-~~~~~g~~~~~~l~~~i~~~~~ 256 (278)
+|++.++.. +.... .-+..|..+.++|+..|.+-+.
T Consensus 131 ~P~l~ii~~~~~~~~vl~~~~G~~~~~~ll~~L~~~~e 168 (178)
T 2ec4_A 131 FPLFLIIMGKRSSNEVLNVIQGNTTVDELMMRLMAAME 168 (178)
T ss_dssp CSEEEEECCCSSCCCEEEEECSCCCHHHHHHHHHHHHH
T ss_pred CCeEEEEEcCCCceEEEEEEeCCCCHHHHHHHHHHHHH
Confidence 999999943 22221 1257899999999988876654
No 435
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=97.34 E-value=0.00058 Score=53.86 Aligned_cols=41 Identities=7% Similarity=0.137 Sum_probs=36.6
Q ss_pred cCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeC
Q 023747 36 IDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDI 76 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~ 76 (278)
...+.++.|+..| ++|..+.|.+.++.+++.+++.|..+..
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~ 65 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPADVHFVRLPA 65 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCTTEEEEEEEC
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCCCeEEEEEeh
Confidence 4567899999999 9999999999999999998888887765
No 436
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=97.34 E-value=0.0001 Score=55.89 Aligned_cols=64 Identities=8% Similarity=0.165 Sum_probs=41.6
Q ss_pred cchHHHhhcCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC----C----C-CCCCCcCCCeEEE
Q 023747 156 KTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN----E----H-PKLQVEEYPTLLF 226 (278)
Q Consensus 156 ~~~~~~i~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~----~----~-~~~~i~~~Ptl~~ 226 (278)
+.+.+.+.. . . ++.|+++||++|+.+.+.+.+++ +.+..+|++.. + + ..+++.++|+++
T Consensus 40 ~~~~~~i~~-~-~-Vvvf~~~~Cp~C~~~k~~L~~~~--------i~~~~vdId~~~~~~~~~~~L~~~~g~~tvP~if- 107 (146)
T 2ht9_A 40 NQIQETISD-N-C-VVIFSKTSCSYCTMAKKLFHDMN--------VNYKVVELDLLEYGNQFQDALYKMTGERTVPRIF- 107 (146)
T ss_dssp HHHHHHHHH-C-S-EEEEECTTCHHHHHHHHHHHHHT--------CCCEEEEGGGCTTHHHHHHHHHHHHSCCCSCEEE-
T ss_pred HHHHHHhcC-C-C-EEEEECCCChhHHHHHHHHHHcC--------CCeEEEECccCcCCHHHHHHHHHHhCCCCcCeEE-
Confidence 445555532 2 3 45599999999999999988763 23344555433 1 3 256899999984
Q ss_pred EeCCCc
Q 023747 227 YPAGDK 232 (278)
Q Consensus 227 f~~g~~ 232 (278)
.+|+.
T Consensus 108 -i~G~~ 112 (146)
T 2ht9_A 108 -VNGTF 112 (146)
T ss_dssp -ETTEE
T ss_pred -ECCEE
Confidence 36653
No 437
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=97.32 E-value=2.8e-05 Score=60.13 Aligned_cols=97 Identities=7% Similarity=0.091 Sum_probs=64.1
Q ss_pred hHHHhhcCCCcEEEEEE-CCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC----------------------
Q 023747 158 FDDLVLNSHKDVLLEVY-TPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH---------------------- 213 (278)
Q Consensus 158 ~~~~i~~~~~~~~v~f~-~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~---------------------- 213 (278)
+.++. ..++++++.|| ++||++|....+.+.++..+|+.. ++.+..|+.+.. ..
T Consensus 26 Lsd~~-~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~-~v~vv~is~d~~~~~~~~~~~~~~~fp~l~D~~~~v~ 103 (164)
T 4gqc_A 26 LYEVL-KRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKA-NAEVLAISVDSPWCLKKFKDENRLAFNLLSDYNREVI 103 (164)
T ss_dssp HHHHH-HTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGS-SSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHH
T ss_pred HHHHh-cCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhcc-CceEEEecCCCHHHHHHHHHhcCcccceeecCchHHH
Confidence 34433 35788888888 999999998888888888888764 577777776542 11
Q ss_pred CCCCCc----------CCCeEEEEeCCCccCceEe-----cCCCCHHHHHHHHHHHhcc
Q 023747 214 PKLQVE----------EYPTLLFYPAGDKANPIKV-----SARSSSKNIAAFIKEQLKE 257 (278)
Q Consensus 214 ~~~~i~----------~~Ptl~~f~~g~~~~~~~~-----~g~~~~~~l~~~i~~~~~~ 257 (278)
..|++. ..|+.+++...+.+ ...+ .+..+.+++++.+++.++.
T Consensus 104 ~~ygv~~~~~~~~~~~~~p~tflID~~G~I-~~~~~~~~~~~~~~~~eil~~l~~l~~e 161 (164)
T 4gqc_A 104 KLYNVYHEDLKGLKMVAKRAVFIVKPDGTV-AYKWVTDNPLNEPDYDEVVREANKIAGE 161 (164)
T ss_dssp HHTTCEEEEETTEEEEECCEEEEECTTSBE-EEEEECSCTTCCCCHHHHHHHHHHHHHH
T ss_pred HHcCCcccccccCcCCeeeEEEEECCCCEE-EEEEEeCCCCCCCCHHHHHHHHHHHhcc
Confidence 112331 35777888555544 1122 2345788999998877653
No 438
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=97.32 E-value=0.00037 Score=46.63 Aligned_cols=52 Identities=8% Similarity=0.163 Sum_probs=37.7
Q ss_pred EEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-----CCCCCcCCCeEEEEeCCC
Q 023747 170 LLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-----PKLQVEEYPTLLFYPAGD 231 (278)
Q Consensus 170 ~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-----~~~~i~~~Ptl~~f~~g~ 231 (278)
++.|+++||++|+.+.+.+.+. ++.+..+|++.+ +. ..+++.++|+++ .+|+
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~--------~i~~~~~~i~~~~~~~~~~~~~~~~~~vP~l~--~~g~ 60 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSSK--------GVSFQELPIDGNAAKREEMIKRSGRTTVPQIF--IDAQ 60 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH--------TCCCEEEECTTCSHHHHHHHHHHSSCCSCEEE--ETTE
T ss_pred EEEEECCCChhHHHHHHHHHHC--------CCCcEEEECCCCHHHHHHHHHHhCCCCcCEEE--ECCE
Confidence 5779999999999998888764 245666777664 22 245889999985 3554
No 439
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=97.30 E-value=0.0007 Score=56.18 Aligned_cols=88 Identities=11% Similarity=0.135 Sum_probs=62.2
Q ss_pred CCcEEEEEE-CCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC----CC------------------------
Q 023747 166 HKDVLLEVY-TPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH----PK------------------------ 215 (278)
Q Consensus 166 ~~~~~v~f~-~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~----~~------------------------ 215 (278)
+++++|.|| +.||++|....+.+.+++..|+.. ++.+..|.++.. .. .+
T Consensus 91 GK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~-gv~vv~IS~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~va~ 169 (254)
T 3tjj_A 91 GKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSI-NTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISK 169 (254)
T ss_dssp TSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTT-TEEEEEEESSCHHHHHHHHTSCGGGTSCCSCSSCEEECTTSHHHH
T ss_pred CCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHc-CCEEEEEcCCCHHHHHHHHHHHHHhcCCcccccceeeCcHHHHHH
Confidence 678999999 999999999999999999999764 588888887643 10 01
Q ss_pred -CCCc------CCCeEEEEeCCCccCceEecC----CCCHHHHHHHHHHHh
Q 023747 216 -LQVE------EYPTLLFYPAGDKANPIKVSA----RSSSKNIAAFIKEQL 255 (278)
Q Consensus 216 -~~i~------~~Ptl~~f~~g~~~~~~~~~g----~~~~~~l~~~i~~~~ 255 (278)
|++. .+|+.+++...+.+. ..+.+ ..+.+++++.|...-
T Consensus 170 ~ygv~~~~~g~~~p~tflID~~G~I~-~~~~~~~~~~~~~~eil~~L~alq 219 (254)
T 3tjj_A 170 DYGVYLEDSGHTLRGLFIIDDKGILR-QITLNDLPVGRSVDETLRLVQAFQ 219 (254)
T ss_dssp HHTCEETTTTEECEEEEEECTTSBEE-EEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HcCCccccCCCccceEEEECCCCeEE-EEEecCCCCCCCHHHHHHHHHhhc
Confidence 1332 469999996555542 23333 456788888876543
No 440
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=97.30 E-value=0.0011 Score=51.36 Aligned_cols=89 Identities=9% Similarity=0.059 Sum_probs=59.5
Q ss_pred CCceEEEEEeCc--cchHHHHHHHHHHHHHhcCceEEEEEeCCCcc-------------c------chhHHHHcCCCCCC
Q 023747 37 DTLDMVYVFAKA--DDLKSLLEPLEDIARNFKGKIMFTAVDIADED-------------L------AKPFLTLFGLEESK 95 (278)
Q Consensus 37 ~~~~~v~F~~~~--~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~-------------~------~~~l~~~~~i~~~~ 95 (278)
+++++|.||++| ++|....|.+.+++++ + .+.|+.|+.+... . ...+++.||+....
T Consensus 44 gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~-~-~v~vv~Is~D~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~ 121 (175)
T 1xvq_A 44 GKSVLLNIFPSVDTPVCATSVRTFDERAAA-S-GATVLCVSKDLPFAQKRFCGAEGTENVMPASAFRDSFGEDYGVTIAD 121 (175)
T ss_dssp TSCEEEEECSCCCSSCCCHHHHHHHHHHHH-T-TCEEEEEESSCHHHHTTCC------CEEEEECTTSSHHHHTTCBBCS
T ss_pred CCEEEEEEEeCCCCchHHHHHHHHHHHHhh-c-CCEEEEEECCCHHHHHHHHHHcCCCCceEeeCCHHHHHHHhCCcccc
Confidence 568999999887 7999999999999999 4 4888888876210 0 14688899997641
Q ss_pred --------ceEEEEecCCcceeecCCC--CCChHHHHHHHHHH
Q 023747 96 --------NTVVTAFDNKAISKFLLES--DLTPSNIEEFCSRL 128 (278)
Q Consensus 96 --------Ptl~~~~~~~~~~~~~~~g--~~~~~~i~~fi~~~ 128 (278)
|+. .+++..+...+.+.| .....++.+.++.+
T Consensus 122 ~~~~g~~~p~~-~lid~~G~I~~~~~g~~~~~~~~~~~~l~~l 163 (175)
T 1xvq_A 122 GPMAGLLARAI-VVIGADGNVAYTELVPEIAQEPNYEAALAAL 163 (175)
T ss_dssp STTTTSBCSEE-EEECTTSBEEEEEECSBTTCCCCHHHHHHHH
T ss_pred cccCCcccceE-EEECCCCeEEEEEECCCcCCCCCHHHHHHHH
Confidence 677 566655445554432 22333444555443
No 441
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=97.29 E-value=0.00073 Score=55.55 Aligned_cols=88 Identities=5% Similarity=-0.031 Sum_probs=61.9
Q ss_pred cCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCc-----------------------------------
Q 023747 36 IDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADE----------------------------------- 79 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~----------------------------------- 79 (278)
..+..++.|+.+| ++|+++.+.+.++.+. ++|.|..++..-.
T Consensus 96 ~ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~--g~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~l~~ 173 (241)
T 1v58_A 96 DAPVIVYVFADPFCPYCKQFWQQARPWVDS--GKVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGGKLKLNV 173 (241)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHT--TSEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHTTTCCCCCC
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHhC--CcEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHHhccCCCCc
Confidence 3456788899999 9999999999988775 5677766554200
Q ss_pred ------------ccchhHHHHcCCCCCCceEEEEecCCcceeecCCCCCChHHHHHHHHHH
Q 023747 80 ------------DLAKPFLTLFGLEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRL 128 (278)
Q Consensus 80 ------------~~~~~l~~~~~i~~~~Ptl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~ 128 (278)
+....+++++||.+. ||+ .+.++++ ....+.|..+.+.+.++++..
T Consensus 174 ~~~~~~~~~~~v~~~~~l~~~~gv~gt-Pt~-vi~~~~G-~~~~~~G~~~~~~L~~~l~~~ 231 (241)
T 1v58_A 174 PANVSTEQMKVLSDNEKLMDDLGANVT-PAI-YYMSKEN-TLQQAVGLPDQKTLNIIMGNK 231 (241)
T ss_dssp CSSCCHHHHHHHHHHHHHHHHHTCCSS-CEE-EEEETTT-EEEEEESSCCHHHHHHHTTC-
T ss_pred cccCCHHHHHHHHHHHHHHHHcCCCCC-CEE-EEECCCC-CEEEecCCCCHHHHHHHHHHH
Confidence 001457789999999 999 6655322 222347888888888887664
No 442
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=97.27 E-value=0.0014 Score=51.03 Aligned_cols=90 Identities=4% Similarity=-0.064 Sum_probs=61.4
Q ss_pred CCceEEEEE-eCc-cchHHHHHHHHHHHHHhcCc-eEEEEEeCCCccc------------------chhHHHHcCCCC--
Q 023747 37 DTLDMVYVF-AKA-DDLKSLLEPLEDIARNFKGK-IMFTAVDIADEDL------------------AKPFLTLFGLEE-- 93 (278)
Q Consensus 37 ~~~~~v~F~-~~~-~~c~~~~~~~~~la~~~~~~-v~f~~vd~~~~~~------------------~~~l~~~~~i~~-- 93 (278)
+++++|.|| +.| +.|....|.+.+++++|++. +.+..|.++.... ...+++.||+..
T Consensus 51 Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D~~~~~~~~~~~~~~~f~~l~D~~~~~~~~~gv~~~~ 130 (179)
T 3ixr_A 51 NQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRDSVKSHDSFCAKQGFTFPLVSDSDAILCKAFDVIKEK 130 (179)
T ss_dssp TSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTCHHHHHTTCEEEE
T ss_pred CCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCceEEEECCchHHHHHcCCcccc
Confidence 346778887 788 89999999999999999764 8888887764322 245677777753
Q ss_pred ----------CCceEEEEecCCcceeecCCCC---CChHHHHHHHHHH
Q 023747 94 ----------SKNTVVTAFDNKAISKFLLESD---LTPSNIEEFCSRL 128 (278)
Q Consensus 94 ----------~~Ptl~~~~~~~~~~~~~~~g~---~~~~~i~~fi~~~ 128 (278)
. |+. .+++..+...+.+.+. ...+++.+.++.+
T Consensus 131 ~~~g~~~~~~~-p~~-~lID~~G~I~~~~~~~~~~~~~~~il~~l~~l 176 (179)
T 3ixr_A 131 TMYGRQVIGIE-RST-FLIGPTHRIVEAWRQVKVPGHAEEVLNKLKAH 176 (179)
T ss_dssp CCC--CEEEEC-CEE-EEECTTSBEEEEECSCCSTTHHHHHHHHHHHH
T ss_pred cccCcccCCcc-eEE-EEECCCCEEEEEEcCCCCCCCHHHHHHHHHHH
Confidence 3 667 6777665555544433 3455666666553
No 443
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=97.24 E-value=0.00045 Score=52.36 Aligned_cols=80 Identities=19% Similarity=0.319 Sum_probs=56.7
Q ss_pred cCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCC---------------------------------
Q 023747 164 NSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA--------------------------------- 210 (278)
Q Consensus 164 ~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~--------------------------------- 210 (278)
.+.+..++.|+.++|++|+.+.+.+.++ + ++.+...+.--
T Consensus 12 ~~a~~~vv~f~D~~Cp~C~~~~~~l~~l-----~--~v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~~~a~~~~~~~g~~ 84 (147)
T 3gv1_A 12 GNGKLKVAVFSDPDCPFCKRLEHEFEKM-----T--DVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRKGKF 84 (147)
T ss_dssp TTCCEEEEEEECTTCHHHHHHHHHHTTC-----C--SEEEEEEECCCTTTCTTHHHHHHHHHTSSSHHHHHHHHHHHCCC
T ss_pred CCCCEEEEEEECCCChhHHHHHHHHhhc-----C--ceEEEEEEccccccChhHHHHHHHHHcCCCHHHHHHHHHhCCCC
Confidence 3467889999999999999999887654 2 45444433210
Q ss_pred ----CCC-----------CCCCCcCCCeEEEEeCCCccCceEecCCCCHHHHHHHHHHHhc
Q 023747 211 ----NEH-----------PKLQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLK 256 (278)
Q Consensus 211 ----~~~-----------~~~~i~~~Ptl~~f~~g~~~~~~~~~g~~~~~~l~~~i~~~~~ 256 (278)
.++ .+++|+++||+++ .+|+ ...|..+.+.|.++|.+...
T Consensus 85 ~~~~~~~~~~v~~~~~la~~~gI~gtPt~vi-~nG~-----~i~G~~~~~~l~~~i~~~~~ 139 (147)
T 3gv1_A 85 PVGGSICDNPVAETTSLGEQFGFNGTPTLVF-PNGR-----TQSGYSPMPQLEEIIRKNQQ 139 (147)
T ss_dssp CTTCCCCSCSHHHHHHHHHHTTCCSSCEEEC-TTSC-----EEESCCCTTHHHHHHHHTSC
T ss_pred CCccHHHHHHHHHHHHHHHHhCCCccCEEEE-ECCE-----EeeCCCCHHHHHHHHHHHHH
Confidence 000 1338999999998 5554 46788899999999987654
No 444
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=97.23 E-value=0.00019 Score=50.99 Aligned_cols=64 Identities=13% Similarity=0.157 Sum_probs=42.7
Q ss_pred cchHHHhhcCCCcEEEEEEC-----CCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC----C-CCCCcCCCeE
Q 023747 156 KTFDDLVLNSHKDVLLEVYT-----PWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH----P-KLQVEEYPTL 224 (278)
Q Consensus 156 ~~~~~~i~~~~~~~~v~f~~-----~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~----~-~~~i~~~Ptl 224 (278)
+.+.+.+. .+ . ++.|+. +||++|+.+.+.+.+. .+.|..+|++.+ +. . .++..++|++
T Consensus 8 ~~~~~~i~-~~-~-vvvf~~g~~~~~~C~~C~~~~~~L~~~--------~i~~~~vdi~~~~~~~~~l~~~~g~~~vP~v 76 (105)
T 2yan_A 8 ERLKVLTN-KA-S-VMLFMKGNKQEAKCGFSKQILEILNST--------GVEYETFDILEDEEVRQGLKAYSNWPTYPQL 76 (105)
T ss_dssp HHHHHHHT-SS-S-EEEEESBCSSSBCTTHHHHHHHHHHHH--------TCCCEEEEGGGCHHHHHHHHHHHTCCSSCEE
T ss_pred HHHHHHhc-cC-C-EEEEEecCCCCCCCccHHHHHHHHHHC--------CCCeEEEECCCCHHHHHHHHHHHCCCCCCeE
Confidence 34455542 22 3 445777 9999999999888776 256777888766 32 1 2478899998
Q ss_pred EEEeCCCc
Q 023747 225 LFYPAGDK 232 (278)
Q Consensus 225 ~~f~~g~~ 232 (278)
+ .+|+.
T Consensus 77 ~--i~g~~ 82 (105)
T 2yan_A 77 Y--VKGEL 82 (105)
T ss_dssp E--ETTEE
T ss_pred E--ECCEE
Confidence 4 46653
No 445
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=97.22 E-value=0.0015 Score=42.68 Aligned_cols=67 Identities=18% Similarity=0.308 Sum_probs=49.6
Q ss_pred EEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHH---HcCCCCCCceEEEEecCCcceeecCCCCC
Q 023747 41 MVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLT---LFGLEESKNTVVTAFDNKAISKFLLESDL 116 (278)
Q Consensus 41 ~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~---~~~i~~~~Ptl~~~~~~~~~~~~~~~g~~ 116 (278)
++.|+.+| ++|+++.+.++++ + +.|..+|.+.. +.+.+ ++|+.+. |++ . .+ +. .. ++.
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~-----~-i~~~~~di~~~---~~~~~~~~~~~~~~v-P~l-~-~~-g~--~~---~g~ 64 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA-----G-LAYNTVDISLD---DEARDYVMALGYVQA-PVV-E-VD-GE--HW---SGF 64 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-----T-CCCEEEETTTC---HHHHHHHHHTTCBCC-CEE-E-ET-TE--EE---ESC
T ss_pred EEEEeCCCChHHHHHHHHHHHc-----C-CCcEEEECCCC---HHHHHHHHHcCCCcc-CEE-E-EC-Ce--EE---cCC
Confidence 56788899 9999999998875 3 77888898877 55554 8999999 999 4 33 32 22 345
Q ss_pred ChHHHHHHH
Q 023747 117 TPSNIEEFC 125 (278)
Q Consensus 117 ~~~~i~~fi 125 (278)
+.+.+.+++
T Consensus 65 ~~~~l~~~l 73 (75)
T 1r7h_A 65 RPERIKQLQ 73 (75)
T ss_dssp CHHHHHHHH
T ss_pred CHHHHHHHH
Confidence 777877776
No 446
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=97.21 E-value=0.00066 Score=56.12 Aligned_cols=89 Identities=10% Similarity=0.024 Sum_probs=66.1
Q ss_pred eEEEEEeCc-cchHHHHHHHHHHHHHhcC-ceEEEEEeCCCcc------------------------cchhHHHHcCCC-
Q 023747 40 DMVYVFAKA-DDLKSLLEPLEDIARNFKG-KIMFTAVDIADED------------------------LAKPFLTLFGLE- 92 (278)
Q Consensus 40 ~~v~F~~~~-~~c~~~~~~~~~la~~~~~-~v~f~~vd~~~~~------------------------~~~~l~~~~~i~- 92 (278)
+++.|+++| +.|....+.+.+++.+|++ .+.++.|+++... ....+++.||+.
T Consensus 37 VL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~Ds~~~~~~w~~~~~~~~~~~i~fPil~D~~~~ia~~ygv~~ 116 (249)
T 3a2v_A 37 VLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVARRLGLLH 116 (249)
T ss_dssp EEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHTCCCCCSCEEECTTSHHHHHHTCCC
T ss_pred EEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEECCCHHHHHHHHHHHHHhcCCCCceeEEECCchHHHHHhCCcc
Confidence 344567899 9999999999999999975 3889888886421 024688999997
Q ss_pred ------CCCceEEEEecCCcceeecCCC----CCChHHHHHHHHHHhc
Q 023747 93 ------ESKNTVVTAFDNKAISKFLLES----DLTPSNIEEFCSRLLH 130 (278)
Q Consensus 93 ------~~~Ptl~~~~~~~~~~~~~~~g----~~~~~~i~~fi~~~~~ 130 (278)
.. |++ ++++..+..++.+.| .++.++|.+.++.+..
T Consensus 117 ~~~g~~~~-p~~-fIID~dG~I~~~~~~~~~~gr~~~Ellr~I~alq~ 162 (249)
T 3a2v_A 117 AESATHTV-RGV-FIVDARGVIRTMLYYPMELGRLVDEILRIVKALKL 162 (249)
T ss_dssp TTCSSSCC-EEE-EEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHHH
T ss_pred ccCCCccc-ceE-EEECCCCeEEEEEecCCcccchhHHHHHHHHHHHh
Confidence 77 998 777765555444333 3678999999888653
No 447
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=97.20 E-value=0.002 Score=48.96 Aligned_cols=77 Identities=10% Similarity=0.097 Sum_probs=52.0
Q ss_pred ceEEEEE-eCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcc------------------cchhHHHHcCCCCCCc--
Q 023747 39 LDMVYVF-AKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADED------------------LAKPFLTLFGLEESKN-- 96 (278)
Q Consensus 39 ~~~v~F~-~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~------------------~~~~l~~~~~i~~~~P-- 96 (278)
++++.|| +.| ++|....|.+.+++++|++.-.+..|.++... ....+++.||+... |
T Consensus 37 ~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~-p~~ 115 (159)
T 2a4v_A 37 VVVFFVYPRASTPGSTRQASGFRDNYQELKEYAAVFGLSADSVTSQKKFQSKQNLPYHLLSDPKREFIGLLGAKKT-PLS 115 (159)
T ss_dssp EEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTCEEEEEESCCHHHHHHHHHHHTCSSEEEECTTCHHHHHHTCBSS-SSS
T ss_pred eEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEeCCCHHHHHHHHHHhCCCceEEECCccHHHHHhCCccc-ccC
Confidence 5677777 788 99999999999999999753266666654321 12478889999887 8
Q ss_pred ----eEEEEecCCcceeecCCCCCCh
Q 023747 97 ----TVVTAFDNKAISKFLLESDLTP 118 (278)
Q Consensus 97 ----tl~~~~~~~~~~~~~~~g~~~~ 118 (278)
+.+.+ ..| ...+.+.|....
T Consensus 116 g~~~~~~li-~~G-~i~~~~~g~~~~ 139 (159)
T 2a4v_A 116 GSIRSHFIF-VDG-KLKFKRVKISPE 139 (159)
T ss_dssp CBCCEEEEE-ETT-EEEEEEESCCHH
T ss_pred CccceEEEE-cCC-EEEEEEccCCcc
Confidence 44255 544 345555555443
No 448
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=97.20 E-value=0.00045 Score=53.13 Aligned_cols=84 Identities=14% Similarity=0.130 Sum_probs=55.4
Q ss_pred CCcEEEEEE-CCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC------------------------CCCCCc
Q 023747 166 HKDVLLEVY-TPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH------------------------PKLQVE 219 (278)
Q Consensus 166 ~~~~~v~f~-~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~------------------------~~~~i~ 219 (278)
+++++|.|| +.||++|....+.+.++... + ++.+..|+.+.. .. ..|++.
T Consensus 46 Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~-~---~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~gv~ 121 (166)
T 3p7x_A 46 GKKKLISVVPSIDTGVCDQQTRKFNSDASK-E---EGIVLTISADLPFAQKRWCASAGLDNVITLSDHRDLSFGENYGVV 121 (166)
T ss_dssp TSCEEEEECSCTTSHHHHHHHHHHHHHSCT-T---TSEEEEEESSCHHHHHHHHHHHTCSSCEEEECTTTCHHHHHHTCE
T ss_pred CCcEEEEEECCCCCCccHHHHHHHHHHhhc-C---CCEEEEEECCCHHHHHHHHHHcCCCceEEccCCchhHHHHHhCCc
Confidence 678999998 78999999988999888777 3 577777776542 11 112344
Q ss_pred C------CCeEEEEeCCCccCceEe----cCCCCHHHHHHHHHH
Q 023747 220 E------YPTLLFYPAGDKANPIKV----SARSSSKNIAAFIKE 253 (278)
Q Consensus 220 ~------~Ptl~~f~~g~~~~~~~~----~g~~~~~~l~~~i~~ 253 (278)
. .|+.+++...+.+....+ .+..+.+.+.+.|++
T Consensus 122 ~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~il~~l~~ 165 (166)
T 3p7x_A 122 MEELRLLARAVFVLDADNKVVYKEIVSEGTDFPDFDAALAAYKN 165 (166)
T ss_dssp ETTTTEECCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHT
T ss_pred cccCCceeeEEEEECCCCeEEEEEEcCCcccCCCHHHHHHHHhc
Confidence 3 799999965444411111 224567788877753
No 449
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=97.19 E-value=0.0011 Score=53.64 Aligned_cols=92 Identities=3% Similarity=0.027 Sum_probs=67.0
Q ss_pred cCCceEEEEE-eCc-cchHHHHHHHHHHHHHhcC-ceEEEEEeCCCccc-------------------------chhHHH
Q 023747 36 IDTLDMVYVF-AKA-DDLKSLLEPLEDIARNFKG-KIMFTAVDIADEDL-------------------------AKPFLT 87 (278)
Q Consensus 36 ~~~~~~v~F~-~~~-~~c~~~~~~~~~la~~~~~-~v~f~~vd~~~~~~-------------------------~~~l~~ 87 (278)
.+++++|.|| +.| ++|....|.+.+++++|++ .+.++.|..+.... ...+++
T Consensus 55 ~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 134 (221)
T 2c0d_A 55 GQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVDSVYSHLAWKNMPIEKGGIGNVEFTLVSDINKDISK 134 (221)
T ss_dssp TTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhhhhcCccCCceEEEECCchHHHH
Confidence 3568899999 999 9999999999999999963 38888777654210 135677
Q ss_pred HcCCC-----CCCceEEEEecCCcceeecCCC----CCChHHHHHHHHHHh
Q 023747 88 LFGLE-----ESKNTVVTAFDNKAISKFLLES----DLTPSNIEEFCSRLL 129 (278)
Q Consensus 88 ~~~i~-----~~~Ptl~~~~~~~~~~~~~~~g----~~~~~~i~~fi~~~~ 129 (278)
.||+. .. |+. .+++..+...+.+.| ..+.+++.+.++.+.
T Consensus 135 ~ygv~~~~g~~~-P~~-~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~L~ 183 (221)
T 2c0d_A 135 NYNVLYDNSFAL-RGL-FIIDKNGCVRHQTVNDLPIGRNVQEVLRTIDSII 183 (221)
T ss_dssp HTTCEETTTEEC-EEE-EEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HcCCcccCCCcc-ceE-EEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHh
Confidence 78873 56 888 777765555554433 357888888888765
No 450
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=97.18 E-value=0.00052 Score=53.11 Aligned_cols=45 Identities=13% Similarity=0.098 Sum_probs=36.3
Q ss_pred CCCcEEEEEE-CCCChhHHH-HHHHHHHHHHHhcCCCce-EEEEEeCCC
Q 023747 165 SHKDVLLEVY-TPWCVTCET-TSKQIEKLAKHFKGLDNL-VIAKIDASA 210 (278)
Q Consensus 165 ~~~~~~v~f~-~~~c~~c~~-~~~~~~~~a~~~~~~~~~-~~~~vd~~~ 210 (278)
.+++++|.|| +.||++|.. ..|.+.+++.+|+.. ++ .+..|+.+.
T Consensus 30 ~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~-gv~~vv~Is~d~ 77 (167)
T 2wfc_A 30 AGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGK-GVDIIACMAVND 77 (167)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHT-TCCEEEEEESSC
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHC-CCCEEEEEeCCC
Confidence 3567888876 999999999 899999999998653 57 788887654
No 451
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=97.13 E-value=0.00063 Score=48.82 Aligned_cols=53 Identities=11% Similarity=0.332 Sum_probs=36.2
Q ss_pred EEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-----C----CCC-CCCcCCCeEEEEeCCCc
Q 023747 170 LLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-----E----HPK-LQVEEYPTLLFYPAGDK 232 (278)
Q Consensus 170 ~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-----~----~~~-~~i~~~Ptl~~f~~g~~ 232 (278)
+++|+++||++|+.+.+.+.+. .+.+..+|++.. + +.+ .+..++|+++ -+|+.
T Consensus 21 v~vy~~~~Cp~C~~~~~~L~~~--------~i~~~~~di~~~~~~~~~~~~~l~~~~g~~tvP~if--i~g~~ 83 (113)
T 3rhb_A 21 VVIYSKTWCSYCTEVKTLFKRL--------GVQPLVVELDQLGPQGPQLQKVLERLTGQHTVPNVF--VCGKH 83 (113)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT--------TCCCEEEEGGGSTTHHHHHHHHHHHHHSCCSSCEEE--ETTEE
T ss_pred EEEEECCCChhHHHHHHHHHHc--------CCCCeEEEeecCCCChHHHHHHHHHHhCCCCcCEEE--ECCEE
Confidence 7779999999999998888764 233445565541 2 222 3788999984 46653
No 452
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=97.13 E-value=0.00053 Score=52.58 Aligned_cols=44 Identities=20% Similarity=0.210 Sum_probs=35.4
Q ss_pred CCCcEEEEEE-CCCChhHH-HHHHHHHHHHHHhcCCCceE-EEEEeCC
Q 023747 165 SHKDVLLEVY-TPWCVTCE-TTSKQIEKLAKHFKGLDNLV-IAKIDAS 209 (278)
Q Consensus 165 ~~~~~~v~f~-~~~c~~c~-~~~~~~~~~a~~~~~~~~~~-~~~vd~~ 209 (278)
.+++++|.|| +.||++|. ...|.+.++...++.. ++. +..|+.+
T Consensus 34 ~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~-~v~~vv~Is~d 80 (162)
T 1tp9_A 34 AGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSK-GVTEILCISVN 80 (162)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHT-TCCCEEEEESS
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHC-CCCEEEEEECC
Confidence 3678999999 89999999 7899999999998643 466 6666654
No 453
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=97.12 E-value=0.00035 Score=47.54 Aligned_cols=73 Identities=12% Similarity=0.091 Sum_probs=47.7
Q ss_pred cEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-----CC-CCCCC-----cCCCeEEEEeCCCccCce
Q 023747 168 DVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-----EH-PKLQV-----EEYPTLLFYPAGDKANPI 236 (278)
Q Consensus 168 ~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-----~~-~~~~i-----~~~Ptl~~f~~g~~~~~~ 236 (278)
..+++|+++||++|+.+...+.+... .+.+..+|...+ ++ ..++. .++|++++ +|+.
T Consensus 4 m~v~ly~~~~Cp~C~~~~~~L~~~~i------~~~~~~vd~~~~~~~~~el~~~~g~~~~~~~~vP~i~i--~g~~---- 71 (89)
T 3msz_A 4 MKVKIYTRNGCPYCVWAKQWFEENNI------AFDETIIDDYAQRSKFYDEMNQSGKVIFPISTVPQIFI--DDEH---- 71 (89)
T ss_dssp CCEEEEECTTCHHHHHHHHHHHHTTC------CCEEEECCSHHHHHHHHHHHHTTTCCSSCCCSSCEEEE--TTEE----
T ss_pred eEEEEEEcCCChhHHHHHHHHHHcCC------CceEEEeecCCChhHHHHHHHHhCCCCCCCCccCEEEE--CCEE----
Confidence 34788999999999998877765431 345555565433 22 23455 89999965 5542
Q ss_pred EecCCCCHHHHHHHHHHHhc
Q 023747 237 KVSARSSSKNIAAFIKEQLK 256 (278)
Q Consensus 237 ~~~g~~~~~~l~~~i~~~~~ 256 (278)
.| ..+++.+++.+.++
T Consensus 72 --i~--g~~~i~~~~~~~~~ 87 (89)
T 3msz_A 72 --IG--GFTELKANADKILN 87 (89)
T ss_dssp --EE--SHHHHHHTHHHHTT
T ss_pred --Ee--ChHHHHHHHHHHhc
Confidence 22 45677787777654
No 454
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=97.12 E-value=0.00026 Score=47.37 Aligned_cols=70 Identities=11% Similarity=0.163 Sum_probs=49.5
Q ss_pred EEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHH---HcCCCCCCceEEEEecCCcceeecCCCCC
Q 023747 41 MVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLT---LFGLEESKNTVVTAFDNKAISKFLLESDL 116 (278)
Q Consensus 41 ~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~---~~~i~~~~Ptl~~~~~~~~~~~~~~~g~~ 116 (278)
++.|+++| ++|+++.+.+++. + +.|..+|.+.. +.+.+ ++|+.+. |++ . .++. .. +..
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~-----~-i~~~~vdi~~~---~~~~~~~~~~g~~~v-P~~-~-~~g~---~~---~g~ 64 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENR-----G-FDFEMINVDRV---PEAAEALRAQGFRQL-PVV-I-AGDL---SW---SGF 64 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-----T-CCCEEEETTTC---HHHHHHHHHTTCCSS-CEE-E-ETTE---EE---ESC
T ss_pred EEEEcCCCChhHHHHHHHHHHC-----C-CCeEEEECCCC---HHHHHHHHHhCCCcc-CEE-E-ECCE---EE---ecC
Confidence 57789999 9999999998864 3 77888999876 44443 5899999 999 3 3432 22 345
Q ss_pred ChHHHHHHHHHH
Q 023747 117 TPSNIEEFCSRL 128 (278)
Q Consensus 117 ~~~~i~~fi~~~ 128 (278)
+.+.|.+++++.
T Consensus 65 ~~~~l~~~l~~~ 76 (81)
T 1h75_A 65 RPDMINRLHPAP 76 (81)
T ss_dssp CHHHHGGGSCCC
T ss_pred CHHHHHHHHhcc
Confidence 667776666543
No 455
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=97.11 E-value=0.0016 Score=51.06 Aligned_cols=92 Identities=8% Similarity=0.007 Sum_probs=65.1
Q ss_pred CCceEEEEEe-Cc-cchHHHHHHHHHHHHHhcC-ceEEEEEeCCCccc----------------------chhHHHHcCC
Q 023747 37 DTLDMVYVFA-KA-DDLKSLLEPLEDIARNFKG-KIMFTAVDIADEDL----------------------AKPFLTLFGL 91 (278)
Q Consensus 37 ~~~~~v~F~~-~~-~~c~~~~~~~~~la~~~~~-~v~f~~vd~~~~~~----------------------~~~l~~~~~i 91 (278)
+++++|.||. .| +.|....|.+.+++++|++ .+.++.|..+.... ...+++.||+
T Consensus 30 Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~ygv 109 (186)
T 1n8j_A 30 GRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFDN 109 (186)
T ss_dssp TSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSEEEECTTSHHHHHTTC
T ss_pred CCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCcccCCceeEEECCchHHHHHhCC
Confidence 4678888885 88 8999999999999999974 48888877663211 2345666776
Q ss_pred C------CCCceEEEEecCCcceeecCCCC----CChHHHHHHHHHHhc
Q 023747 92 E------ESKNTVVTAFDNKAISKFLLESD----LTPSNIEEFCSRLLH 130 (278)
Q Consensus 92 ~------~~~Ptl~~~~~~~~~~~~~~~g~----~~~~~i~~fi~~~~~ 130 (278)
. .. |+. .+++..+...+.+.|. .+.+++.+.++.+..
T Consensus 110 ~~~~~g~~~-p~~-~lID~~G~i~~~~~~~~~~~~~~~~l~~~l~~l~~ 156 (186)
T 1n8j_A 110 MREDEGLAD-RAT-FVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQY 156 (186)
T ss_dssp EETTTTEEC-EEE-EEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHHH
T ss_pred ccCCCCcee-eEE-EEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHHH
Confidence 5 24 888 7777655555554443 368888888887653
No 456
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=97.10 E-value=0.0018 Score=52.05 Aligned_cols=91 Identities=9% Similarity=0.102 Sum_probs=66.8
Q ss_pred CCceEEEEE-eCc-cchHHHHHHHHHHHHHhcC-ceEEEEEeCCCccc-------------------------chhHHHH
Q 023747 37 DTLDMVYVF-AKA-DDLKSLLEPLEDIARNFKG-KIMFTAVDIADEDL-------------------------AKPFLTL 88 (278)
Q Consensus 37 ~~~~~v~F~-~~~-~~c~~~~~~~~~la~~~~~-~v~f~~vd~~~~~~-------------------------~~~l~~~ 88 (278)
+++++|.|| +.| ++|....|.+.+++++|++ .+.++.|.++.... ...+++.
T Consensus 48 Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ 127 (211)
T 2pn8_A 48 GKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISKD 127 (211)
T ss_dssp TSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHHHH
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhccCccCCceEEEECCchHHHHH
Confidence 468899999 999 9999999999999999964 48888777653210 2357778
Q ss_pred cCCC------CCCceEEEEecCCcceeecCCCC----CChHHHHHHHHHHh
Q 023747 89 FGLE------ESKNTVVTAFDNKAISKFLLESD----LTPSNIEEFCSRLL 129 (278)
Q Consensus 89 ~~i~------~~~Ptl~~~~~~~~~~~~~~~g~----~~~~~i~~fi~~~~ 129 (278)
||+. .. |+. .+++..+..++.+.|. .+.+++.+.++.+.
T Consensus 128 ygv~~~~~g~~~-p~~-~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~l~ 176 (211)
T 2pn8_A 128 YGVYLEDSGHTL-RGL-FIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQ 176 (211)
T ss_dssp TTCEETTTTEEC-EEE-EEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred cCCcccCCCccc-ceE-EEECCCCEEEEEEecCCCCCCCHHHHHHHHHHhh
Confidence 8884 46 888 7777665555544332 57788888888765
No 457
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=97.10 E-value=0.00053 Score=52.70 Aligned_cols=42 Identities=19% Similarity=0.336 Sum_probs=36.3
Q ss_pred CCcEEEEEE-CCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCC
Q 023747 166 HKDVLLEVY-TPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA 210 (278)
Q Consensus 166 ~~~~~v~f~-~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~ 210 (278)
+++++|.|| +.||++|....+.+.++..++ . ++.+..|+.+.
T Consensus 43 gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~-~--~v~vv~Is~d~ 85 (165)
T 1q98_A 43 SKRKVLNIFPSIDTGVCATSVRKFNQQAAKL-S--NTIVLCISADL 85 (165)
T ss_dssp TSEEEEEECSCSCSSCCCHHHHHHHHHHHHS-T--TEEEEEEESSC
T ss_pred CCeEEEEEECCCCCCccHHHHHHHHHHHHHc-C--CCEEEEEeCCC
Confidence 678999998 899999999999999999998 3 68888887764
No 458
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=97.05 E-value=0.00064 Score=52.50 Aligned_cols=85 Identities=11% Similarity=0.083 Sum_probs=58.1
Q ss_pred CCcEEEEEE-CCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCC-C-----------------------CCCCCc-
Q 023747 166 HKDVLLEVY-TPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASANE-H-----------------------PKLQVE- 219 (278)
Q Consensus 166 ~~~~~v~f~-~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~~-~-----------------------~~~~i~- 219 (278)
+++++|.|| +.||++|....+.+.++...+ . ++.+..|..+..+ . ..|++.
T Consensus 47 gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~-~--~v~vv~Is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~ 123 (171)
T 2yzh_A 47 DVVQVIITVPSLDTPVCETETKKFNEIMAGM-E--GVDVTVVSMDLPFAQKRFCESFNIQNVTVASDFRYRDMEKYGVLI 123 (171)
T ss_dssp SSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-T--TEEEEEEESSCHHHHHHHHHHTTCCSSEEEECTTTCGGGGGTCBB
T ss_pred CCeEEEEEECCCCCCchHHHHHHHHHHHHHc-C--CceEEEEeCCCHHHHHHHHHHcCCCCeEEeecCccCcHHHhCCEe
Confidence 678999998 899999999999999999888 3 6777777765321 0 112222
Q ss_pred --------CCCeEEEEeCCCccCceEecC-----CCCHHHHHHHHHHH
Q 023747 220 --------EYPTLLFYPAGDKANPIKVSA-----RSSSKNIAAFIKEQ 254 (278)
Q Consensus 220 --------~~Ptl~~f~~g~~~~~~~~~g-----~~~~~~l~~~i~~~ 254 (278)
..|+.+++..++.+ ...+.| ..+.+.+.+.|++.
T Consensus 124 ~~~~~~g~~~p~~~liD~~G~i-~~~~~~~~~~~~~~~~~ll~~l~~l 170 (171)
T 2yzh_A 124 GEGALKGILARAVFIIDKEGKV-AYVQLVPEITEEPNYDEVVNKVKEL 170 (171)
T ss_dssp CSSTTTTSBCCEEEEECTTSBE-EEEEECSBTTSCCCCHHHHHHHHHC
T ss_pred cccccCCceeeEEEEEcCCCeE-EEEEeCCCcCCCCCHHHHHHHHHhh
Confidence 15888888655544 223432 45567888888754
No 459
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=97.05 E-value=0.0024 Score=52.43 Aligned_cols=91 Identities=7% Similarity=0.095 Sum_probs=66.5
Q ss_pred CCceEEEEEe-Cc-cchHHHHHHHHHHHHHhcC-ceEEEEEeCCCccc-------------------------chhHHHH
Q 023747 37 DTLDMVYVFA-KA-DDLKSLLEPLEDIARNFKG-KIMFTAVDIADEDL-------------------------AKPFLTL 88 (278)
Q Consensus 37 ~~~~~v~F~~-~~-~~c~~~~~~~~~la~~~~~-~v~f~~vd~~~~~~-------------------------~~~l~~~ 88 (278)
+++++|.||. .| +.|....|.+.+++++|++ .+.++.|.++.... ...+++.
T Consensus 77 Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~fp~l~D~~~~v~~~ 156 (240)
T 3qpm_A 77 GKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVDSQFTHLAWIITPRKQGGLGPMKIPLLSDLTHQISKD 156 (240)
T ss_dssp TSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHHHHH
T ss_pred CCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhcCCCCCceeEEeCchHHHHHH
Confidence 4678888998 88 9999999999999999975 38888887764211 2367788
Q ss_pred cCCC------CCCceEEEEecCCcceeecCCC----CCChHHHHHHHHHHh
Q 023747 89 FGLE------ESKNTVVTAFDNKAISKFLLES----DLTPSNIEEFCSRLL 129 (278)
Q Consensus 89 ~~i~------~~~Ptl~~~~~~~~~~~~~~~g----~~~~~~i~~fi~~~~ 129 (278)
||+. .. |+. .+++..+...+.+.+ ..+.+++.+.++...
T Consensus 157 ygv~~~~~g~~~-p~~-flID~~G~I~~~~~~~~~~~~~~~eil~~l~~lq 205 (240)
T 3qpm_A 157 YGVYLEDQGHTL-RGL-FIIDEKGVLRQITMNDLPVGRSVDETLRLVQAFQ 205 (240)
T ss_dssp TTCEETTTTEEC-EEE-EEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred hCCccccCCCcc-ceE-EEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHhh
Confidence 8887 56 888 777766555554322 356788888887653
No 460
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=97.03 E-value=0.0054 Score=49.40 Aligned_cols=41 Identities=7% Similarity=-0.006 Sum_probs=35.7
Q ss_pred CCceEEEEEeCc-cchHHHHHHHHHHHHHhcCc-eEEEEEeCCC
Q 023747 37 DTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGK-IMFTAVDIAD 78 (278)
Q Consensus 37 ~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~-v~f~~vd~~~ 78 (278)
+++++|.|+++| ++|. -.|.+++++++|++. +.+..|+|++
T Consensus 56 GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~g~~Vlgvs~d~ 98 (215)
T 2i3y_A 56 GKHILFVNVATYCGLTA-QYPELNALQEELKPYGLVVLGFPCNQ 98 (215)
T ss_dssp TSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGGTEEEEEEECCC
T ss_pred CCEEEEEEeCCCCCChH-hHHHHHHHHHHhccCCeEEEEEEccc
Confidence 468999999999 9998 789999999999754 9999998763
No 461
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=97.02 E-value=0.00071 Score=51.83 Aligned_cols=85 Identities=11% Similarity=0.075 Sum_probs=57.7
Q ss_pred CCCcEEEEEEC-CCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCC-C------------------------CCCCC
Q 023747 165 SHKDVLLEVYT-PWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASANE-H------------------------PKLQV 218 (278)
Q Consensus 165 ~~~~~~v~f~~-~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~~-~------------------------~~~~i 218 (278)
.+++++|.||+ .||++|....+.+.++...+ . ++.+..|+.+..+ . ..|++
T Consensus 41 ~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~-~--~v~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~gv 117 (163)
T 1psq_A 41 DGKKKVLSVVPSIDTGICSTQTRRFNEELAGL-D--NTVVLTVSMDLPFAQKRWCGAEGLDNAIMLSDYFDHSFGRDYAL 117 (163)
T ss_dssp TTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-T--TEEEEEEESSCHHHHHHHHHHHTCTTSEEEECTTTCHHHHHHTC
T ss_pred CCCEEEEEEECCCCCCccHHHHHHHHHHHHHc-C--CcEEEEEECCCHHHHHHHHHhcCCCCcEEecCCchhHHHHHhCC
Confidence 36789999995 99999999999999999888 3 6888888775320 0 01233
Q ss_pred c----C--CCeEEEEeCCCccCceEecC-----CCCHHHHHHHHHH
Q 023747 219 E----E--YPTLLFYPAGDKANPIKVSA-----RSSSKNIAAFIKE 253 (278)
Q Consensus 219 ~----~--~Ptl~~f~~g~~~~~~~~~g-----~~~~~~l~~~i~~ 253 (278)
. + .|+.+++...+.+ ...+.| ..+.+++.+.|++
T Consensus 118 ~~~~~g~~~p~~~liD~~G~i-~~~~~g~~~~~~~~~~~~l~~l~~ 162 (163)
T 1psq_A 118 LINEWHLLARAVFVLDTDNTI-RYVEYVDNINSEPNFEAAIAAAKA 162 (163)
T ss_dssp BCTTTCSBCCEEEEECTTCBE-EEEEECSBTTSCCCHHHHHHHHHH
T ss_pred ccccCCceEEEEEEEcCCCeE-EEEEecCCcCCCCCHHHHHHHHHh
Confidence 3 2 3899888655544 224433 3455788887764
No 462
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=96.99 E-value=0.00054 Score=47.09 Aligned_cols=53 Identities=19% Similarity=0.331 Sum_probs=38.4
Q ss_pred EEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-C----CCCCcCCCeEEEEeCCC
Q 023747 169 VLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-P----KLQVEEYPTLLFYPAGD 231 (278)
Q Consensus 169 ~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~----~~~i~~~Ptl~~f~~g~ 231 (278)
.++.|+++||++|+.+.+.+.+. ++.|..+|++.+ .. . .+++.++|++ |.+|+
T Consensus 7 ~v~ly~~~~C~~C~~~~~~L~~~--------~i~~~~~di~~~~~~~~~l~~~~~~~~vP~l--~~~g~ 65 (92)
T 2khp_A 7 DVIIYTRPGCPYCARAKALLARK--------GAEFNEIDASATPELRAEMQERSGRNTFPQI--FIGSV 65 (92)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHT--------TCCCEEEESTTSHHHHHHHHHHHTSSCCCEE--EETTE
T ss_pred cEEEEECCCChhHHHHHHHHHHc--------CCCcEEEECCCCHHHHHHHHHHhCCCCcCEE--EECCE
Confidence 37789999999999988887763 356677888765 22 2 4578899975 34664
No 463
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=96.96 E-value=0.0055 Score=47.23 Aligned_cols=92 Identities=5% Similarity=-0.048 Sum_probs=65.0
Q ss_pred CCceEEEEEeCc-c-chHHHHHHHHHHHHHhc---CceEEEEEeCCCc----------------------------ccch
Q 023747 37 DTLDMVYVFAKA-D-DLKSLLEPLEDIARNFK---GKIMFTAVDIADE----------------------------DLAK 83 (278)
Q Consensus 37 ~~~~~v~F~~~~-~-~c~~~~~~~~~la~~~~---~~v~f~~vd~~~~----------------------------~~~~ 83 (278)
+++++|.||.+| + .|....+.+.++.+++. ..+.++.|.++.. +...
T Consensus 28 Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~~~~~~~~~~~~~~~~w~~l~~~~~~~~~ 107 (170)
T 3me7_A 28 GKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLEDIKRFQKEYGIDGKGWKVVKAKTSEDLF 107 (170)
T ss_dssp TSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHHHHHHHHHHTTCCSSSEEEEEESSHHHHH
T ss_pred CCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHHHHHHHHHHcCCCCCCeEEEeCCCHHHHH
Confidence 578999999999 5 59999999999999995 3477777766510 0113
Q ss_pred hHHHHcCCC---------CCCceEEEEecCCcceeecCCCC-CChHHHHHHHHHHhc
Q 023747 84 PFLTLFGLE---------ESKNTVVTAFDNKAISKFLLESD-LTPSNIEEFCSRLLH 130 (278)
Q Consensus 84 ~l~~~~~i~---------~~~Ptl~~~~~~~~~~~~~~~g~-~~~~~i~~fi~~~~~ 130 (278)
.+++.||+. .. |++ .+++..+..+..+.|. .+.++|.+.+.+...
T Consensus 108 ~~~~~~g~~~~~~~~~~~~~-~~~-~lID~~G~i~~~~~g~~~~~~~i~~~l~~~~~ 162 (170)
T 3me7_A 108 KLLDAIDFRFMTAGNDFIHP-NVV-VVLSPELQIKDYIYGVNYNYLEFVNALRLARG 162 (170)
T ss_dssp HHHHHTTCCCEEETTEEECC-CEE-EEECTTSBEEEEEESSSCCHHHHHHHHHHHTT
T ss_pred HHHHHCCeEEecCCCccccC-ceE-EEECCCCeEEEEEeCCCCCHHHHHHHHHHhhc
Confidence 566666643 33 667 6777665555445554 789999999988753
No 464
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=96.95 E-value=0.00064 Score=51.89 Aligned_cols=89 Identities=8% Similarity=0.139 Sum_probs=53.8
Q ss_pred CCceEEEEE-eCc-cchHHHHHHHHHHHHHhcCc-eEEEEEeCCCccc------------------chhHHHHcCCC---
Q 023747 37 DTLDMVYVF-AKA-DDLKSLLEPLEDIARNFKGK-IMFTAVDIADEDL------------------AKPFLTLFGLE--- 92 (278)
Q Consensus 37 ~~~~~v~F~-~~~-~~c~~~~~~~~~la~~~~~~-v~f~~vd~~~~~~------------------~~~l~~~~~i~--- 92 (278)
++++++.|| +.| ++|....|.+.+++.++++. +.+..|+.+.... ...+++.|||.
T Consensus 30 Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~vs~d~~~~~~~~~~~~~~~~p~l~D~~~~v~~~ygv~~~~ 109 (157)
T 4g2e_A 30 GKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVDPPFSNKAFKEHNKLNFTILSDYNREVVKKYNVAWEF 109 (157)
T ss_dssp TSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCEEEC
T ss_pred CCeEEEEecCCCCCCccccchhhcccccccccccCceEeeecccchhHHHHHHHHcCCcEEEEEcCCcHHHHHcCCcccc
Confidence 467888888 899 99999999999999998753 7777777664322 13455666653
Q ss_pred --------CCCceEEEEecCCcceeecC-----CCCCChHHHHHHHHH
Q 023747 93 --------ESKNTVVTAFDNKAISKFLL-----ESDLTPSNIEEFCSR 127 (278)
Q Consensus 93 --------~~~Ptl~~~~~~~~~~~~~~-----~g~~~~~~i~~fi~~ 127 (278)
.. |+. .+.+..+..+|.. .+..+.+++.+.++.
T Consensus 110 ~~~~~~~~~~-p~t-flID~~G~I~~~~~~~~~~~~~~~~eil~~l~~ 155 (157)
T 4g2e_A 110 PALPGYVLAK-RAV-FVIDKEGKVRYKWVSDDPTKEPPYDEIEKVVKS 155 (157)
T ss_dssp TTSTTCEEEC-EEE-EEECTTSBEEEEEEESSTTCCCCHHHHHHHHHH
T ss_pred ccCCCcceee-eeE-EEECCCCEEEEEEECCCCCCCCCHHHHHHHHHH
Confidence 12 555 5666555444432 344567788777764
No 465
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=96.95 E-value=0.0011 Score=54.39 Aligned_cols=45 Identities=20% Similarity=0.310 Sum_probs=37.6
Q ss_pred CCCcEEEEEE-CCCChhHH-HHHHHHHHHHHHhcCCCce-EEEEEeCCC
Q 023747 165 SHKDVLLEVY-TPWCVTCE-TTSKQIEKLAKHFKGLDNL-VIAKIDASA 210 (278)
Q Consensus 165 ~~~~~~v~f~-~~~c~~c~-~~~~~~~~~a~~~~~~~~~-~~~~vd~~~ 210 (278)
.+++++|.|| ++||++|. ...|.+.+++..|+.. ++ .+..|+.+.
T Consensus 32 ~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~-~~~~vv~is~d~ 79 (241)
T 1nm3_A 32 DNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKY-GVDDILVVSVND 79 (241)
T ss_dssp TTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHT-TCCEEEEEESSC
T ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHC-CCCEEEEEEcCC
Confidence 3678999999 99999999 8899999999999653 57 788887754
No 466
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=96.91 E-value=0.00046 Score=53.56 Aligned_cols=43 Identities=12% Similarity=0.202 Sum_probs=34.6
Q ss_pred CcEEEEEECCCChhHHHH-HHHHHHHHHHhcCCCceE-EEEEeCCC
Q 023747 167 KDVLLEVYTPWCVTCETT-SKQIEKLAKHFKGLDNLV-IAKIDASA 210 (278)
Q Consensus 167 ~~~~v~f~~~~c~~c~~~-~~~~~~~a~~~~~~~~~~-~~~vd~~~ 210 (278)
+.+++.||++||++|..- .|.+.++..+|+.. ++. +..|+.+.
T Consensus 45 ~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~-g~~~vv~Is~d~ 89 (171)
T 2pwj_A 45 KVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAK-GVDSVICVAIND 89 (171)
T ss_dssp EEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHT-TCSEEEEEESSC
T ss_pred CEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHC-CCCEEEEEeCCC
Confidence 467778999999999998 99999999998653 466 77777654
No 467
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=96.90 E-value=0.0069 Score=48.45 Aligned_cols=41 Identities=5% Similarity=-0.040 Sum_probs=35.1
Q ss_pred cCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCc-eEEEEEeCC
Q 023747 36 IDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGK-IMFTAVDIA 77 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~-v~f~~vd~~ 77 (278)
.+++++|.|+++| ++| .-.|.+++++++|++. +.+..|+++
T Consensus 37 kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~g~~vlgvs~d 79 (207)
T 2r37_A 37 AGKYVLFVNVASYGGLT-GQYIELNALQEELAPFGLVILGFPCN 79 (207)
T ss_dssp TTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccCCEEEEEEECc
Confidence 3468999999999 999 5689999999999764 899999876
No 468
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=96.89 E-value=0.00052 Score=54.21 Aligned_cols=42 Identities=14% Similarity=0.333 Sum_probs=34.8
Q ss_pred CcEEEEEECCCChhHHHHHHHH---HHHHHHhcCCCceEEEEEeCCC
Q 023747 167 KDVLLEVYTPWCVTCETTSKQI---EKLAKHFKGLDNLVIAKIDASA 210 (278)
Q Consensus 167 ~~~~v~f~~~~c~~c~~~~~~~---~~~a~~~~~~~~~~~~~vd~~~ 210 (278)
++.+|.|++.||++|+.+.|.+ .++.+.+.+ ++.|..++..-
T Consensus 15 ~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~ 59 (189)
T 3l9v_A 15 APAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLPQ--GSRMVKYHVSL 59 (189)
T ss_dssp CCSEEEEECTTCHHHHHHHHTSCHHHHHHTTCCT--TCCEEEEECSS
T ss_pred CCEEEEEECCCChhHHHHhHhccchHHHHHhCCC--CCEEEEEechh
Confidence 5789999999999999999986 678777765 57788777654
No 469
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=96.85 E-value=0.0012 Score=52.02 Aligned_cols=44 Identities=18% Similarity=0.147 Sum_probs=33.9
Q ss_pred CCcE-EEEEECCCChhHHH-HHHHHHHHHHHhcCCCceE-EEEEeCCC
Q 023747 166 HKDV-LLEVYTPWCVTCET-TSKQIEKLAKHFKGLDNLV-IAKIDASA 210 (278)
Q Consensus 166 ~~~~-~v~f~~~~c~~c~~-~~~~~~~~a~~~~~~~~~~-~~~vd~~~ 210 (278)
++.+ ++.|++.||++|.. -.|.+.+++.+|+.. .+. +..|+.+.
T Consensus 56 Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~-gv~~vv~Is~d~ 102 (184)
T 3uma_A 56 GKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILAR-GVDDIAVVAVND 102 (184)
T ss_dssp TSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTT-TCCEEEEEESSC
T ss_pred CCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHc-CCCEEEEEECCC
Confidence 4544 55566999999999 699999999999764 466 77777654
No 470
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=96.84 E-value=0.012 Score=45.57 Aligned_cols=40 Identities=5% Similarity=0.065 Sum_probs=33.1
Q ss_pred CCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeC
Q 023747 37 DTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDI 76 (278)
Q Consensus 37 ~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~ 76 (278)
..+.+|.|+.-. ++|.++.+.+.++.+++.+.+.+..+..
T Consensus 21 ~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~~~~~~~~~~~~ 61 (184)
T 4dvc_A 21 SSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPEGAKFQKNHV 61 (184)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHTSCTTCEEEEEEC
T ss_pred CCCEEEEEECCCCHhHHHHhHHHHHHHhhcCCceEEEEEec
Confidence 456889999877 9999999999999999987766665544
No 471
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=96.77 E-value=0.0014 Score=46.20 Aligned_cols=55 Identities=16% Similarity=0.109 Sum_probs=41.0
Q ss_pred eEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcc----cchhHHHHcCCCCCCceE
Q 023747 40 DMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADED----LAKPFLTLFGLEESKNTV 98 (278)
Q Consensus 40 ~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~----~~~~l~~~~~i~~~~Ptl 98 (278)
.++.|+.+| ++|+++.+.+.+++..+.+ |..+|.+... ....+.+.+|+.+. |++
T Consensus 13 ~v~~f~~~~C~~C~~~~~~L~~~~~~~~~---~~~vdi~~~~~~~~~~~~l~~~~g~~~v-P~i 72 (105)
T 1kte_A 13 KVVVFIKPTCPFCRKTQELLSQLPFKEGL---LEFVDITATSDTNEIQDYLQQLTGARTV-PRV 72 (105)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHSCBCTTS---EEEEEGGGSTTHHHHHHHHHHHHSCCCS-CEE
T ss_pred CEEEEEcCCCHhHHHHHHHHHHcCCCCCc---cEEEEccCCCCHHHHHHHHHHHhCCCCc-CeE
Confidence 467799999 9999999999988666543 4455655431 11357888999999 999
No 472
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=96.74 E-value=0.0014 Score=52.13 Aligned_cols=42 Identities=19% Similarity=0.332 Sum_probs=36.7
Q ss_pred CCcEEEEEE-CCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCC
Q 023747 166 HKDVLLEVY-TPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA 210 (278)
Q Consensus 166 ~~~~~v~f~-~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~ 210 (278)
+++++|.|| +.||++|....+.+.++..++ . ++.+..|..+.
T Consensus 78 Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~-~--~v~vv~Is~D~ 120 (200)
T 3zrd_A 78 GKRKVLNIFPSIDTGVCAASVRKFNQLAGEL-E--NTVVLCISSDL 120 (200)
T ss_dssp TSEEEEEECSCCCCSCCCHHHHHHHHHHHTS-T--TEEEEEEESSC
T ss_pred CCcEEEEEECCCCCchhHHHHHHHHHHHHHh-C--CCEEEEEECCC
Confidence 678999998 789999999999999999999 3 68888888765
No 473
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=96.70 E-value=0.0039 Score=51.63 Aligned_cols=90 Identities=8% Similarity=0.081 Sum_probs=64.7
Q ss_pred CCceEEEEE-eCc-cchHHHHHHHHHHHHHhcCc-eEEEEEeCCCccc-------------------------chhHHHH
Q 023747 37 DTLDMVYVF-AKA-DDLKSLLEPLEDIARNFKGK-IMFTAVDIADEDL-------------------------AKPFLTL 88 (278)
Q Consensus 37 ~~~~~v~F~-~~~-~~c~~~~~~~~~la~~~~~~-v~f~~vd~~~~~~-------------------------~~~l~~~ 88 (278)
++.++|.|| +.| +.|....|.+.+++++|++. +.++.|.++.... ...+++.
T Consensus 91 GK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~gv~vv~IS~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~va~~ 170 (254)
T 3tjj_A 91 GKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISKD 170 (254)
T ss_dssp TSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTSCCSCSSCEEECTTSHHHHH
T ss_pred CCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHHHHhcCCcccccceeeCcHHHHHHH
Confidence 457788888 788 89999999999999999753 8888887764211 2467778
Q ss_pred cCCC------CCCceEEEEecCCcceeecCCC----CCChHHHHHHHHHH
Q 023747 89 FGLE------ESKNTVVTAFDNKAISKFLLES----DLTPSNIEEFCSRL 128 (278)
Q Consensus 89 ~~i~------~~~Ptl~~~~~~~~~~~~~~~g----~~~~~~i~~fi~~~ 128 (278)
||+. .. |+. .+++..+..++.+.+ ..+.+++.+.++..
T Consensus 171 ygv~~~~~g~~~-p~t-flID~~G~I~~~~~~~~~~~~~~~eil~~L~al 218 (254)
T 3tjj_A 171 YGVYLEDSGHTL-RGL-FIIDDKGILRQITLNDLPVGRSVDETLRLVQAF 218 (254)
T ss_dssp HTCEETTTTEEC-EEE-EEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred cCCccccCCCcc-ceE-EEECCCCeEEEEEecCCCCCCCHHHHHHHHHhh
Confidence 8885 35 888 777766555554332 46678888887764
No 474
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=96.63 E-value=0.0051 Score=47.05 Aligned_cols=53 Identities=9% Similarity=0.014 Sum_probs=37.1
Q ss_pred CCceEEEEE-eCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCC
Q 023747 37 DTLDMVYVF-AKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGL 91 (278)
Q Consensus 37 ~~~~~v~F~-~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i 91 (278)
++++++.|| +.| ++|....|.+.+++++ ++ +.+..|..+......++++++++
T Consensus 46 Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~-~~-~~vv~is~d~~~~~~~~~~~~~~ 100 (166)
T 3p7x_A 46 GKKKLISVVPSIDTGVCDQQTRKFNSDASK-EE-GIVLTISADLPFAQKRWCASAGL 100 (166)
T ss_dssp TSCEEEEECSCTTSHHHHHHHHHHHHHSCT-TT-SEEEEEESSCHHHHHHHHHHHTC
T ss_pred CCcEEEEEECCCCCCccHHHHHHHHHHhhc-CC-CEEEEEECCCHHHHHHHHHHcCC
Confidence 467888888 678 8999999999999888 44 77777776643222233444444
No 475
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=96.62 E-value=0.002 Score=45.88 Aligned_cols=65 Identities=15% Similarity=0.190 Sum_probs=43.6
Q ss_pred ccchHHHhhcCCCcEEEEEEC-----CCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-C----CCCCcCCCe
Q 023747 155 GKTFDDLVLNSHKDVLLEVYT-----PWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-P----KLQVEEYPT 223 (278)
Q Consensus 155 ~~~~~~~i~~~~~~~~v~f~~-----~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~-~~-~----~~~i~~~Pt 223 (278)
.+.+++.+. .++ ++.|+. +||++|..+...+.+. ++.+..+|++.+ +. . ..+...+|.
T Consensus 5 ~~~~~~~i~-~~~--vvvy~~g~~~~~~Cp~C~~ak~~L~~~--------~i~~~~vdi~~~~~~~~~l~~~~g~~~vP~ 73 (109)
T 1wik_A 5 SSGLKVLTN-KAS--VMLFMKGNKQEAKCGFSKQILEILNST--------GVEYETFDILEDEEVRQGLKTFSNWPTYPQ 73 (109)
T ss_dssp CCCHHHHHT-TSS--EEEEESSTTTCCCSSTHHHHHHHHHHT--------CSCEEEEESSSCHHHHHHHHHHHSCCSSCE
T ss_pred HHHHHHHhc-cCC--EEEEEecCCCCCCCchHHHHHHHHHHc--------CCCeEEEECCCCHHHHHHHHHHhCCCCCCE
Confidence 355667663 222 556777 9999999988887654 366788888876 32 1 236788998
Q ss_pred EEEEeCCCc
Q 023747 224 LLFYPAGDK 232 (278)
Q Consensus 224 l~~f~~g~~ 232 (278)
+ |.+|+.
T Consensus 74 i--fi~g~~ 80 (109)
T 1wik_A 74 L--YVRGDL 80 (109)
T ss_dssp E--ECSSSE
T ss_pred E--EECCEE
Confidence 5 456654
No 476
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=96.61 E-value=0.0029 Score=48.70 Aligned_cols=60 Identities=12% Similarity=0.164 Sum_probs=47.3
Q ss_pred CCceEEEEE-eCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCceE
Q 023747 37 DTLDMVYVF-AKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTV 98 (278)
Q Consensus 37 ~~~~~v~F~-~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Ptl 98 (278)
++++++.|| +.| +.|....|.+.+++++| ..+.++.|..+......++++++++..+ |.+
T Consensus 47 gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~-~~v~vv~Is~d~~~~~~~~~~~~~~~~~-~~l 108 (171)
T 2yzh_A 47 DVVQVIITVPSLDTPVCETETKKFNEIMAGM-EGVDVTVVSMDLPFAQKRFCESFNIQNV-TVA 108 (171)
T ss_dssp SSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-TTEEEEEEESSCHHHHHHHHHHTTCCSS-EEE
T ss_pred CCeEEEEEECCCCCCchHHHHHHHHHHHHHc-CCceEEEEeCCCHHHHHHHHHHcCCCCe-EEe
Confidence 457888888 688 99999999999999999 5699999988765333457778887656 655
No 477
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=96.59 E-value=0.00093 Score=53.20 Aligned_cols=44 Identities=9% Similarity=0.113 Sum_probs=40.2
Q ss_pred cCCceEEEEEeCc-cchHHHHHHH---HHHHHHhcCceEEEEEeCCCc
Q 023747 36 IDTLDMVYVFAKA-DDLKSLLEPL---EDIARNFKGKIMFTAVDIADE 79 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~~~~~---~~la~~~~~~v~f~~vd~~~~ 79 (278)
..++.+|.||+.| ++|+++.|.| .++++.+.+++.|..++.+..
T Consensus 112 ~~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~~v~~~~~~v~~~ 159 (197)
T 1un2_A 112 AGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPEGVKMTKYHVNFM 159 (197)
T ss_dssp TTCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCTTCCEEEEECSSS
T ss_pred CCCCEEEEEECCCChhHHHhCcccccHHHHHHHCCCCCEEEEeccCcC
Confidence 3568999999999 9999999999 999999998999999999865
No 478
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=96.57 E-value=0.0028 Score=48.37 Aligned_cols=60 Identities=8% Similarity=0.041 Sum_probs=47.1
Q ss_pred CCceEEEEEe-Cc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCceE
Q 023747 37 DTLDMVYVFA-KA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTV 98 (278)
Q Consensus 37 ~~~~~v~F~~-~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Ptl 98 (278)
++++++.||. .| ++|....|.+.+++++| ..+.+..|+.+......++++++++..+ |.+
T Consensus 42 gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~-~~v~vv~is~d~~~~~~~~~~~~~~~~~-~~l 103 (163)
T 1psq_A 42 GKKKVLSVVPSIDTGICSTQTRRFNEELAGL-DNTVVLTVSMDLPFAQKRWCGAEGLDNA-IML 103 (163)
T ss_dssp TSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-TTEEEEEEESSCHHHHHHHHHHHTCTTS-EEE
T ss_pred CCEEEEEEECCCCCCccHHHHHHHHHHHHHc-CCcEEEEEECCCHHHHHHHHHhcCCCCc-EEe
Confidence 4678888985 88 89999999999999999 5699999988755333457778887556 655
No 479
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=96.54 E-value=0.0027 Score=49.39 Aligned_cols=44 Identities=14% Similarity=0.129 Sum_probs=31.7
Q ss_pred CCcEEEEE-ECCCChhHH-HHHHHHHHHHHHhcCCCceEEEE-EeCCC
Q 023747 166 HKDVLLEV-YTPWCVTCE-TTSKQIEKLAKHFKGLDNLVIAK-IDASA 210 (278)
Q Consensus 166 ~~~~~v~f-~~~~c~~c~-~~~~~~~~~a~~~~~~~~~~~~~-vd~~~ 210 (278)
++.++|+| ++.||++|. .-.|.+.+++.+|+.. .+.+.. +..+.
T Consensus 43 gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~-gv~vv~~iS~D~ 89 (173)
T 3mng_A 43 GKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAK-GVQVVACLSVND 89 (173)
T ss_dssp TSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTT-TCCEEEEEESSC
T ss_pred CCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEEcCCC
Confidence 56555555 599999999 4789999999999764 354443 65544
No 480
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=96.53 E-value=0.00077 Score=49.81 Aligned_cols=56 Identities=14% Similarity=0.255 Sum_probs=36.0
Q ss_pred EEEEECCCChhHHHH-HHHHHHHHHHhcCCCceEEEEEeCCCC--------CCC-CCCCcCCCeEEEEeCCCc
Q 023747 170 LLEVYTPWCVTCETT-SKQIEKLAKHFKGLDNLVIAKIDASAN--------EHP-KLQVEEYPTLLFYPAGDK 232 (278)
Q Consensus 170 ~v~f~~~~c~~c~~~-~~~~~~~a~~~~~~~~~~~~~vd~~~~--------~~~-~~~i~~~Ptl~~f~~g~~ 232 (278)
+++|+.+||++|..+ .+.+.+.+.. .+.+..+|++.. ++. .++..++|++ |-+|+.
T Consensus 39 Vvvy~~~~Cp~C~~a~k~~L~~~~~~-----~i~~~~vdvd~~~~~~~~~~~L~~~~g~~tVP~v--fi~g~~ 104 (129)
T 3ctg_A 39 VFVAAKTYCPYCKATLSTLFQELNVP-----KSKALVLELDEMSNGSEIQDALEEISGQKTVPNV--YINGKH 104 (129)
T ss_dssp EEEEECTTCHHHHHHHHHHHTTSCCC-----GGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--EETTEE
T ss_pred EEEEECCCCCchHHHHHHHHHhcCcc-----CCCcEEEEccccCCHHHHHHHHHHHhCCCCCCEE--EECCEE
Confidence 778999999999998 7777654311 133444554433 122 4588899996 446653
No 481
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=96.49 E-value=0.0016 Score=46.81 Aligned_cols=55 Identities=16% Similarity=0.200 Sum_probs=41.2
Q ss_pred eEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcc----cchhHHHHcCCCCCCceE
Q 023747 40 DMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADED----LAKPFLTLFGLEESKNTV 98 (278)
Q Consensus 40 ~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~----~~~~l~~~~~i~~~~Ptl 98 (278)
.++.|+.+| ++|+++.+.+.+++-.+ +. |..+|++... ....+.+.+|+.+. |++
T Consensus 20 ~vv~f~~~~Cp~C~~~~~~L~~~~~~~-~~--~~~vdi~~~~~~~~~~~~l~~~~g~~~v-P~v 79 (114)
T 2hze_A 20 KVTIFVKYTCPFCRNALDILNKFSFKR-GA--YEIVDIKEFKPENELRDYFEQITGGKTV-PRI 79 (114)
T ss_dssp CEEEEECTTCHHHHHHHHHHTTSCBCT-TS--EEEEEGGGSSSHHHHHHHHHHHHSCCSS-CEE
T ss_pred CEEEEEeCCChhHHHHHHHHHHcCCCc-Cc--eEEEEccCCCChHHHHHHHHHHhCCCCc-CEE
Confidence 577899999 99999999988754332 22 7778877652 11368889999999 998
No 482
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=96.45 E-value=0.0045 Score=50.55 Aligned_cols=87 Identities=11% Similarity=0.071 Sum_probs=60.6
Q ss_pred CcEEEEEE-CCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCC--------------------C-----------C
Q 023747 167 KDVLLEVY-TPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASANE--------------------H-----------P 214 (278)
Q Consensus 167 ~~~~v~f~-~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~~--------------------~-----------~ 214 (278)
++++++|| ++||+.|....+.+.++..+|+.. ++.+..|.++..+ + .
T Consensus 30 ~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~-~v~vigIS~D~~~~~~~~~~~i~~~~~~~~~~~fpil~D~~~~va~ 108 (233)
T 2v2g_A 30 SWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKR-GVKLIALSCDNVADHKEWSEDVKCLSGVKGDMPYPIIADETRELAV 108 (233)
T ss_dssp SEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHT-TEEEEEEESSCHHHHHHHHHHHHHHHTCCSSCSSCEEECTTCHHHH
T ss_pred CeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHc-CCEEEEEcCCCHHHHHHHHHHHHHhhCcccCCceEEEECChHHHHH
Confidence 37888888 899999999999999999999753 5777777776420 0 0
Q ss_pred CCCCc------------CCCeEEEEeCCCccCceEecC----CCCHHHHHHHHHHHh
Q 023747 215 KLQVE------------EYPTLLFYPAGDKANPIKVSA----RSSSKNIAAFIKEQL 255 (278)
Q Consensus 215 ~~~i~------------~~Ptl~~f~~g~~~~~~~~~g----~~~~~~l~~~i~~~~ 255 (278)
.|++. .+|+++++...+.+. ..+.+ .++.+++.+.|....
T Consensus 109 ~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~-~~~~~~~~~gr~~~eilr~l~~Lq 164 (233)
T 2v2g_A 109 KLGMVDPDERTSTGMPLTCRAVFIIGPDKKLK-LSILYPATTGRNFSEILRVIDSLQ 164 (233)
T ss_dssp HTTCEEEEEECTTCCEEECEEEEEECTTSBEE-EEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HhCCcCcccccCCCcccccceEEEECCCCEEE-EEEecCCCCCCCHHHHHHHHHHHH
Confidence 12332 468999986555552 22322 357899999887654
No 483
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=96.45 E-value=0.0022 Score=49.15 Aligned_cols=60 Identities=12% Similarity=0.150 Sum_probs=43.2
Q ss_pred CCceEEEEE-eCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHHHcCCCCCCceE
Q 023747 37 DTLDMVYVF-AKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTV 98 (278)
Q Consensus 37 ~~~~~v~F~-~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~~l~~~~~i~~~~Ptl 98 (278)
++++++.|| +.| ++|....|.+.+++++| ..+.+..|+.+......++++++++..+ |.+
T Consensus 43 gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~-~~v~vv~Is~d~~~~~~~~~~~~~~~~~-~~l 104 (165)
T 1q98_A 43 SKRKVLNIFPSIDTGVCATSVRKFNQQAAKL-SNTIVLCISADLPFAQARFCGAEGIENA-KTV 104 (165)
T ss_dssp TSEEEEEECSCSCSSCCCHHHHHHHHHHHHS-TTEEEEEEESSCHHHHTTCTTTTTCTTE-EEE
T ss_pred CCeEEEEEECCCCCCccHHHHHHHHHHHHHc-CCCEEEEEeCCCHHHHHHHHHHcCCCce-EEe
Confidence 457888888 788 99999999999999999 5599999988754211234445555334 443
No 484
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=96.44 E-value=0.0069 Score=49.07 Aligned_cols=87 Identities=14% Similarity=0.168 Sum_probs=59.8
Q ss_pred cEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCC------------------C---------------C
Q 023747 168 DVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASANE------------------H---------------P 214 (278)
Q Consensus 168 ~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~~------------------~---------------~ 214 (278)
.+++.|+++||++|....+.+.+++.+|+.. ++.+..|.++..+ . .
T Consensus 34 vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~-~v~vi~IS~D~~~~~~~~~~~i~~~~~~~~~~~~~fpil~D~~~~va~ 112 (224)
T 1prx_A 34 GILFSHPRDFTPVCTTELGRAAKLAPEFAKR-NVKLIALSIDSVEDHLAWSKDINAYNSEEPTEKLPFPIIDDRNRELAI 112 (224)
T ss_dssp EEEEEESCSSCHHHHHHHHHHHHHHHHHHTT-TEEEEEEESSCHHHHHHHHHHHHHHTTSCCCSCCSSCEEECTTCHHHH
T ss_pred EEEEEECCCCCCCcHHHHHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHHHhhCcccccCcCcceeecCchHHHH
Confidence 4555568999999999999999999999764 5777777776421 0 0
Q ss_pred CCCCc------------CCCeEEEEeCCCccCceEecC----CCCHHHHHHHHHHHhc
Q 023747 215 KLQVE------------EYPTLLFYPAGDKANPIKVSA----RSSSKNIAAFIKEQLK 256 (278)
Q Consensus 215 ~~~i~------------~~Ptl~~f~~g~~~~~~~~~g----~~~~~~l~~~i~~~~~ 256 (278)
.|++. .+|+.+++...+.+. ..+.+ .++.+++.+.|+....
T Consensus 113 ~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~-~~~~~~~~~gr~~~eil~~i~~l~~ 169 (224)
T 1prx_A 113 LLGMLDPAEKDEKGMPVTARVVFVFGPDKKLK-LSILYPATTGRNFDEILRVVISLQL 169 (224)
T ss_dssp HTTSSCSCTTCSSSCCTTCCEEEEECTTSBEE-EEEECCTTBCCCHHHHHHHHHHHHH
T ss_pred HhCCCCcccccCCCccccceEEEEECCCCEEE-EEEecCCCCCCCHHHHHHHHHHHHh
Confidence 12332 369999996555552 23332 3578999998876553
No 485
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=96.41 E-value=0.034 Score=43.41 Aligned_cols=40 Identities=15% Similarity=0.203 Sum_probs=34.2
Q ss_pred CCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeC
Q 023747 37 DTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDI 76 (278)
Q Consensus 37 ~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~ 76 (278)
..+.++.|+..+ ++|..+.+.+.++.+++.++|.|..+..
T Consensus 25 a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~ 65 (193)
T 2rem_A 25 GKIEVVEIFGYTCPHCAHFDSKLQAWGARQAKDVRFTLVPA 65 (193)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTEEEEEEEC
T ss_pred CCeEEEEEECCCChhHhhhhHHHHHHHHhcCCceEEEEeCc
Confidence 345788899988 9999999999999999988888877765
No 486
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.38 E-value=0.032 Score=43.43 Aligned_cols=94 Identities=9% Similarity=0.015 Sum_probs=67.2
Q ss_pred ecCCceEEEEEeCc-cchHHHHHHH---HHHHHHhcCceEEEEEeCCCccc------------chhHHHH---cCCCCCC
Q 023747 35 QIDTLDMVYVFAKA-DDLKSLLEPL---EDIARNFKGKIMFTAVDIADEDL------------AKPFLTL---FGLEESK 95 (278)
Q Consensus 35 ~~~~~~~v~F~~~~-~~c~~~~~~~---~~la~~~~~~v~f~~vd~~~~~~------------~~~l~~~---~~i~~~~ 95 (278)
+..+.++|++.+++ .+|..+.... .++.+-++.++.+...|.+..++ +..++.. +++.++
T Consensus 53 ~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~~nfV~w~~dv~~~e~~~~~~~~~~~~~g~~~a~~~~~~~~~~~- 131 (178)
T 2ec4_A 53 RDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQNFITWAWDLTKDSNRARFLTMCNRHFGSVVAQTIRTQKTDQF- 131 (178)
T ss_dssp TTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHHHTEEEEEEECCSHHHHHHHHHHHHHHTCHHHHHHHHHSCSTTC-
T ss_pred hhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHHcCEEEEEEeCCCchhhhhhhhhhhhhhHHHHHHHHhhcCCCCC-
Confidence 56788999999999 8998876333 44666666679999999987632 1245544 899999
Q ss_pred ceEEEEecCCc---ceeecCCCCCChHHHHHHHHHHhc
Q 023747 96 NTVVTAFDNKA---ISKFLLESDLTPSNIEEFCSRLLH 130 (278)
Q Consensus 96 Ptl~~~~~~~~---~~~~~~~g~~~~~~i~~fi~~~~~ 130 (278)
|++ .++.... .......|..+++++.+.+...+.
T Consensus 132 P~l-~ii~~~~~~~~vl~~~~G~~~~~~ll~~L~~~~e 168 (178)
T 2ec4_A 132 PLF-LIIMGKRSSNEVLNVIQGNTTVDELMMRLMAAME 168 (178)
T ss_dssp SEE-EEECCCSSCCCEEEEECSCCCHHHHHHHHHHHHH
T ss_pred CeE-EEEEcCCCceEEEEEEeCCCCHHHHHHHHHHHHH
Confidence 999 6664332 122345889999999988877653
No 487
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=96.37 E-value=0.0021 Score=50.56 Aligned_cols=40 Identities=18% Similarity=0.323 Sum_probs=34.3
Q ss_pred CCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCC
Q 023747 166 HKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDAS 209 (278)
Q Consensus 166 ~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~ 209 (278)
+++.+|.|++.||++|+.+.|.+.++.+.+ + +.|..+.+.
T Consensus 22 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~-~---v~~~~~p~~ 61 (185)
T 3feu_A 22 GMAPVTEVFALSCGHCRNMENFLPVISQEA-G---TDIGKMHIT 61 (185)
T ss_dssp CCCSEEEEECTTCHHHHHHGGGHHHHHHHH-T---SCCEEEECC
T ss_pred CCCEEEEEECCCChhHHHhhHHHHHHHHHh-C---CeEEEEecc
Confidence 578899999999999999999999999998 3 566666654
No 488
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=96.36 E-value=0.005 Score=47.42 Aligned_cols=61 Identities=8% Similarity=0.177 Sum_probs=46.6
Q ss_pred CCceEEEEE-eCc-cchHH-HHHHHHHHHHHhcC-ce-EEEEEeCCCcccchhHHHHcCCC-CCCceE
Q 023747 37 DTLDMVYVF-AKA-DDLKS-LLEPLEDIARNFKG-KI-MFTAVDIADEDLAKPFLTLFGLE-ESKNTV 98 (278)
Q Consensus 37 ~~~~~v~F~-~~~-~~c~~-~~~~~~~la~~~~~-~v-~f~~vd~~~~~~~~~l~~~~~i~-~~~Ptl 98 (278)
++++++.|| +.| +.|.. ..|.+.+++++|++ .+ .+..|+.+......++++++++. .+ |.+
T Consensus 31 Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~~~~~~~~~~~~~f-p~l 97 (167)
T 2wfc_A 31 GKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACMAVNDSFVMDAWGKAHGADDKV-QML 97 (167)
T ss_dssp TSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTCTTTS-EEE
T ss_pred CCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHhcCCCcce-EEE
Confidence 456777777 899 99999 99999999999964 38 88888887543335678888875 36 654
No 489
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=96.34 E-value=0.0092 Score=45.99 Aligned_cols=43 Identities=12% Similarity=0.019 Sum_probs=34.3
Q ss_pred CCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeC
Q 023747 166 HKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDA 208 (278)
Q Consensus 166 ~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~ 208 (278)
.+..++.|+..+|++|+.+.+.+..+.+.+...+++.+...+.
T Consensus 27 a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~~~v~~~~~~~ 69 (175)
T 1z6m_A 27 APVKMIEFINVRCPYCRKWFEESEELLAQSVKSGKVERIIKLF 69 (175)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHTTSEEEEEEEC
T ss_pred CCeEEEEEECCCCcchHHHHHHHHHHHHHHhhCCcEEEEEEeC
Confidence 5667999999999999999999999988882222677776664
No 490
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=96.30 E-value=0.0038 Score=44.83 Aligned_cols=53 Identities=6% Similarity=0.132 Sum_probs=36.6
Q ss_pred EEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC----C----C-CCCCCcCCCeEEEEeCCCc
Q 023747 170 LLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN----E----H-PKLQVEEYPTLLFYPAGDK 232 (278)
Q Consensus 170 ~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~~~----~----~-~~~~i~~~Ptl~~f~~g~~ 232 (278)
++.|+.+||++|..+...+.+. ++.+..+|++.. + + ...+..++|++++ +|+.
T Consensus 19 v~vy~~~~Cp~C~~ak~~L~~~--------~i~~~~~dvd~~~~~~~~~~~l~~~~g~~tvP~vfi--~g~~ 80 (114)
T 3h8q_A 19 VVIFSKSYCPHSTRVKELFSSL--------GVECNVLELDQVDDGARVQEVLSEITNQKTVPNIFV--NKVH 80 (114)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT--------TCCCEEEETTTSTTHHHHHHHHHHHHSCCSSCEEEE--TTEE
T ss_pred EEEEEcCCCCcHHHHHHHHHHc--------CCCcEEEEecCCCChHHHHHHHHHHhCCCccCEEEE--CCEE
Confidence 5569999999999998888764 244566666642 1 2 1236788999866 6653
No 491
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=96.28 E-value=0.0031 Score=49.61 Aligned_cols=43 Identities=23% Similarity=0.354 Sum_probs=36.9
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeCC
Q 023747 165 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDAS 209 (278)
Q Consensus 165 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~~ 209 (278)
+++..++.|+++||++|..+.+.+.++.+.+.. ++.+..+...
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~--~v~~~~~p~~ 63 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPS--DAYLRTEHVV 63 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCT--TEEEEEEECC
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHCCC--ceEEEEeccc
Confidence 356789999999999999999999999998865 6888877763
No 492
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=96.28 E-value=0.014 Score=45.71 Aligned_cols=41 Identities=5% Similarity=0.101 Sum_probs=35.2
Q ss_pred cCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeC
Q 023747 36 IDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDI 76 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~ 76 (278)
...+.++.|+..+ ++|..+.|.+.++.+++.+.+.|..+..
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~ 62 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPSDAYLRTEHV 62 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCTTEEEEEEEC
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHCCCceEEEEecc
Confidence 3466789999999 9999999999999999988888877764
No 493
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=96.21 E-value=0.021 Score=42.93 Aligned_cols=83 Identities=13% Similarity=0.082 Sum_probs=58.7
Q ss_pred ecCCceEEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCC----cc-----------------------------
Q 023747 35 QIDTLDMVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIAD----ED----------------------------- 80 (278)
Q Consensus 35 ~~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~----~~----------------------------- 80 (278)
......++.|+.++ ++|+++.+.+.++ +++.+..++.-- .+
T Consensus 12 ~~a~~~vv~f~D~~Cp~C~~~~~~l~~l-----~~v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~~~a~~~~~~~g~~~~ 86 (147)
T 3gv1_A 12 GNGKLKVAVFSDPDCPFCKRLEHEFEKM-----TDVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRKGKFPV 86 (147)
T ss_dssp TTCCEEEEEEECTTCHHHHHHHHHHTTC-----CSEEEEEEECCCTTTCTTHHHHHHHHHTSSSHHHHHHHHHHHCCCCT
T ss_pred CCCCEEEEEEECCCChhHHHHHHHHhhc-----CceEEEEEEccccccChhHHHHHHHHHcCCCHHHHHHHHHhCCCCCC
Confidence 34567788899988 9999999998764 446665443221 00
Q ss_pred ----------cchhHHHHcCCCCCCceEEEEecCCcceeecCCCCCChHHHHHHHHHHh
Q 023747 81 ----------LAKPFLTLFGLEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLL 129 (278)
Q Consensus 81 ----------~~~~l~~~~~i~~~~Ptl~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 129 (278)
....+++++||.+. ||+ .+ .++. . +.|..+.+.|.+++++..
T Consensus 87 ~~~~~~~~v~~~~~la~~~gI~gt-Pt~-vi-~nG~--~--i~G~~~~~~l~~~i~~~~ 138 (147)
T 3gv1_A 87 GGSICDNPVAETTSLGEQFGFNGT-PTL-VF-PNGR--T--QSGYSPMPQLEEIIRKNQ 138 (147)
T ss_dssp TCCCCSCSHHHHHHHHHHTTCCSS-CEE-EC-TTSC--E--EESCCCTTHHHHHHHHTS
T ss_pred ccHHHHHHHHHHHHHHHHhCCCcc-CEE-EE-ECCE--E--eeCCCCHHHHHHHHHHHH
Confidence 03578899999999 999 44 3332 2 368889999999998865
No 494
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=96.21 E-value=0.0092 Score=46.72 Aligned_cols=41 Identities=12% Similarity=0.251 Sum_probs=35.1
Q ss_pred CCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCceEEEEEeC
Q 023747 166 HKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDA 208 (278)
Q Consensus 166 ~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~~~~~~vd~ 208 (278)
.+..++.|++++|++|..+.+.+.++.+.+.+ ++.+..+..
T Consensus 25 a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~--~v~~~~~p~ 65 (193)
T 2rem_A 25 GKIEVVEIFGYTCPHCAHFDSKLQAWGARQAK--DVRFTLVPA 65 (193)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHTSCT--TEEEEEEEC
T ss_pred CCeEEEEEECCCChhHhhhhHHHHHHHHhcCC--ceEEEEeCc
Confidence 45689999999999999999999999988865 688777765
No 495
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=96.14 E-value=0.038 Score=42.39 Aligned_cols=41 Identities=12% Similarity=0.080 Sum_probs=34.0
Q ss_pred cCCceEEEEEeCc-cchHHHHHHHHHHHHHh--cCceEEEEEeC
Q 023747 36 IDTLDMVYVFAKA-DDLKSLLEPLEDIARNF--KGKIMFTAVDI 76 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~~~~~~~la~~~--~~~v~f~~vd~ 76 (278)
...+.++.|+..+ ++|..+.+.+.++.++| .++|.+...+.
T Consensus 26 ~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~~~v~~~~~~~ 69 (175)
T 1z6m_A 26 NAPVKMIEFINVRCPYCRKWFEESEELLAQSVKSGKVERIIKLF 69 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHTTSEEEEEEEC
T ss_pred CCCeEEEEEECCCCcchHHHHHHHHHHHHHHhhCCcEEEEEEeC
Confidence 4456788888888 99999999999999999 77788777654
No 496
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=96.12 E-value=0.0029 Score=48.97 Aligned_cols=62 Identities=11% Similarity=0.042 Sum_probs=46.7
Q ss_pred cCCceEEEEEeCc-cchHHH-HHHHHHHHHHhcC-ceE-EEEEeCCCcccchhHHHHcCCC-CCCceE
Q 023747 36 IDTLDMVYVFAKA-DDLKSL-LEPLEDIARNFKG-KIM-FTAVDIADEDLAKPFLTLFGLE-ESKNTV 98 (278)
Q Consensus 36 ~~~~~~v~F~~~~-~~c~~~-~~~~~~la~~~~~-~v~-f~~vd~~~~~~~~~l~~~~~i~-~~~Ptl 98 (278)
++.++++.|++.| ++|..- .|.+.+++++|++ .+. +..|+.+.......+++++++. .+ |.+
T Consensus 43 gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv~Is~d~~~~~~~~~~~~~~~~~f-p~l 109 (171)
T 2pwj_A 43 DKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKGVDSVICVAINDPYTVNAWAEKIQAKDAI-EFY 109 (171)
T ss_dssp TSEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTTCSEEEEEESSCHHHHHHHHHHTTCTTTS-EEE
T ss_pred CCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHHhCCCCce-EEE
Confidence 3345666788899 999998 9999999999964 377 8888887543335778888884 67 744
No 497
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=96.10 E-value=0.0014 Score=50.45 Aligned_cols=92 Identities=8% Similarity=0.068 Sum_probs=62.4
Q ss_pred cCCceEEEEE-eCc-cchHHHHHHHHHHHHHhcCc-eEEEEEeCCCccc------------------chhHHHHcCCC--
Q 023747 36 IDTLDMVYVF-AKA-DDLKSLLEPLEDIARNFKGK-IMFTAVDIADEDL------------------AKPFLTLFGLE-- 92 (278)
Q Consensus 36 ~~~~~~v~F~-~~~-~~c~~~~~~~~~la~~~~~~-v~f~~vd~~~~~~------------------~~~l~~~~~i~-- 92 (278)
.++++++.|| +.| ++|....|.+.+++.+|++. +.+..|+.+.... ...+++.|||.
T Consensus 32 ~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~fp~l~D~~~~v~~~ygv~~~ 111 (164)
T 4gqc_A 32 RGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAISVDSPWCLKKFKDENRLAFNLLSDYNREVIKLYNVYHE 111 (164)
T ss_dssp TSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSSSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCEEE
T ss_pred CCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccCceEEEecCCCHHHHHHHHHhcCcccceeecCchHHHHHcCCccc
Confidence 4567888888 889 99999899999999998753 7777777664322 23566677763
Q ss_pred --------CCCceEEEEecCCcceeecC-----CCCCChHHHHHHHHHHh
Q 023747 93 --------ESKNTVVTAFDNKAISKFLL-----ESDLTPSNIEEFCSRLL 129 (278)
Q Consensus 93 --------~~~Ptl~~~~~~~~~~~~~~-----~g~~~~~~i~~fi~~~~ 129 (278)
.. |+. .+.+..+..+|.+ .+..+.+++.+-++++.
T Consensus 112 ~~~~~~~~~~-p~t-flID~~G~I~~~~~~~~~~~~~~~~eil~~l~~l~ 159 (164)
T 4gqc_A 112 DLKGLKMVAK-RAV-FIVKPDGTVAYKWVTDNPLNEPDYDEVVREANKIA 159 (164)
T ss_dssp EETTEEEEEC-CEE-EEECTTSBEEEEEECSCTTCCCCHHHHHHHHHHHH
T ss_pred ccccCcCCee-eEE-EEECCCCEEEEEEEeCCCCCCCCHHHHHHHHHHHh
Confidence 23 666 6676655555432 23356788888777654
No 498
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=96.04 E-value=0.0059 Score=46.61 Aligned_cols=62 Identities=6% Similarity=0.089 Sum_probs=45.9
Q ss_pred cCCceEEEEE-eCc-cchH-HHHHHHHHHHHHhcC-ceE-EEEEeCCCcccchhHHHHcCCC-CCCceE
Q 023747 36 IDTLDMVYVF-AKA-DDLK-SLLEPLEDIARNFKG-KIM-FTAVDIADEDLAKPFLTLFGLE-ESKNTV 98 (278)
Q Consensus 36 ~~~~~~v~F~-~~~-~~c~-~~~~~~~~la~~~~~-~v~-f~~vd~~~~~~~~~l~~~~~i~-~~~Ptl 98 (278)
.++++++.|| +.| +.|. ...|.+.+++++|++ .+. +..|..+......++++++++. .+ |.+
T Consensus 34 ~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~Is~d~~~~~~~~~~~~~~~~~~-~~l 101 (162)
T 1tp9_A 34 AGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCISVNDPFVMKAWAKSYPENKHV-KFL 101 (162)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEEEEESSCHHHHHHHHHTCTTCSSE-EEE
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHhcCCCCCe-EEE
Confidence 3467888888 789 9999 899999999999963 377 8888777543234667777775 35 544
No 499
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.03 E-value=0.011 Score=43.37 Aligned_cols=51 Identities=8% Similarity=0.148 Sum_probs=38.3
Q ss_pred EEEEEeCc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccch----hHHHHcCCCCCCceE
Q 023747 41 MVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAK----PFLTLFGLEESKNTV 98 (278)
Q Consensus 41 ~v~F~~~~-~~c~~~~~~~~~la~~~~~~v~f~~vd~~~~~~~~----~l~~~~~i~~~~Ptl 98 (278)
++.|+.+| ++|+.+.+.+.++. +.|..+|.+....++ .+.+.+|+.+. |++
T Consensus 29 vvvf~~~~Cp~C~~~~~~L~~~~------i~~~~vdid~~~~~~~~~~~l~~~~g~~~v-P~l 84 (130)
T 2cq9_A 29 VVIFSKTSCSYCTMAKKLFHDMN------VNYKVVELDLLEYGNQFQDALYKMTGERTV-PRI 84 (130)
T ss_dssp EEEEECSSCSHHHHHHHHHHHHT------CCCEEEETTTSTTHHHHHHHHHHHHSSCCS-SEE
T ss_pred EEEEEcCCChHHHHHHHHHHHcC------CCcEEEECcCCcCcHHHHHHHHHHhCCCCc-CEE
Confidence 45589999 99999999999873 445667776541112 48889999999 999
No 500
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=96.02 E-value=0.0053 Score=48.18 Aligned_cols=61 Identities=8% Similarity=0.016 Sum_probs=44.7
Q ss_pred CCceEEEE-EeCc-cchHH-HHHHHHHHHHHhcCc-eE-EEEEeCCCcccchhHHHHcCCC-CCCceE
Q 023747 37 DTLDMVYV-FAKA-DDLKS-LLEPLEDIARNFKGK-IM-FTAVDIADEDLAKPFLTLFGLE-ESKNTV 98 (278)
Q Consensus 37 ~~~~~v~F-~~~~-~~c~~-~~~~~~~la~~~~~~-v~-f~~vd~~~~~~~~~l~~~~~i~-~~~Ptl 98 (278)
++.+++.| ++.| +.|.. -.|.+.+++++|+++ +. ++.|+.+......++++++++. .+ |.+
T Consensus 56 Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~~~f~~~~~~~~~f-p~l 122 (184)
T 3uma_A 56 GKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIAVVAVNDLHVMGAWATHSGGMGKI-HFL 122 (184)
T ss_dssp TSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHHHHHHHHHHHTCTTTS-EEE
T ss_pred CCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEEEECCCHHHHHHHHHHhCCCCce-EEE
Confidence 34455554 4889 99999 799999999999753 77 8888887643335677888876 45 655
Done!