BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023748
(278 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P38355|YB8B_YEAST Uncharacterized transporter YBR287W OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YBR287W PE=1 SV=1
Length = 427
Score = 40.8 bits (94), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 75/178 (42%), Gaps = 13/178 (7%)
Query: 99 ESFWKRSLEFLHQLLEELLAPPTLAAIVGFIFGAVVWL-RNLIIGDSAPLRVIQDSIEIL 157
+ W++S ++ L PP + I + A+ L R L + D +++ L
Sbjct: 237 DKIWQKSCTVFERIRANL-NPPLYSMIFAVVVAAIGPLQRELFMEDGFINNTFAEAVTQL 295
Query: 158 GDGTIPCITLILGGNLIQGL--------RSSTLKPLIIIAVVCVRYIALPFIGVWVVKAA 209
G +IP I ++LG NL S L II ++ LP I + V
Sbjct: 296 GSVSIPLILVVLGSNLYPSAEVFPKTVHHSKLLIGSIIGRMILPSCFLLPIIAIAVKYIN 355
Query: 210 AALGFLPSDPLYHYVLMVQFTLPPAMNIGTMTQLFDVAQEECSVLFLWTYLVAALALT 267
++ DP++ V + PPA+ + +TQL + + E + + W Y V +L ++
Sbjct: 356 VSIL---DDPIFLVVGFLLTVSPPAIQLTQITQLNEFFEAEMADILFWGYAVLSLPVS 410
>sp|P54072|YL152_YEAST Uncharacterized transporter YLR152C OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YLR152C PE=1 SV=1
Length = 576
Score = 37.7 bits (86), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 119/280 (42%), Gaps = 40/280 (14%)
Query: 20 YQLIKQSSVRYKALAQAAEPEEVPKEVNKDFDA-----NAQTQLLRGTTDDQEDVSVL-- 72
+ I SS+ Y +++ ++ ++ D + +A ++ +G D +S+
Sbjct: 280 FSRIDGSSLSYSRISKNSDGRSYRRKRKADMNELISKYSAAEKIRQGELDLSRPLSLTEE 339
Query: 73 -------VASTKSSSDPECQIIVPQASHLQTRKE---SFW--KRSLEFLHQLLEELLAPP 120
+ + + E I +++ T SF+ + +L++L + L P
Sbjct: 340 VGSRNASIGNVHTGYTDESSIEEENCTNMATDGRGSLSFFIERHNLKWLQYFIINCLRPA 399
Query: 121 TLAAIVGFIFGAVVWLRNLIIG---------DSAP-LRVIQDSIEILGDGTIPCITLILG 170
+L AI+G I + W++ + D P L + D E +G+ +P L+LG
Sbjct: 400 SLGAILGIICALIPWVKACFVTTYVHVHKAPDGEPVLNFLMDFTEYIGNACVPLGLLLLG 459
Query: 171 GNLIQGLRSSTLKPLII---IAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMV 227
G L + L +L P I + + C R I +P IGV V ++ +L + + + +++
Sbjct: 460 GTLAR-LEIKSLPPGFIKSALLMTCFRLIVIPIIGVLWVNKLYSIDWLDTG-IGKFDMIL 517
Query: 228 QFTLPPAMNIGTMTQLF-----DVAQEEC-SVLFLWTYLV 261
+++P A T + D Q C SVLF+ Y +
Sbjct: 518 TWSMPSATAQVYFTAFYTPACGDHIQMNCLSVLFVMQYAI 557
>sp|O14197|YDQ4_SCHPO Uncharacterized transporter C5D6.04 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC5D6.04 PE=3 SV=1
Length = 452
Score = 37.0 bits (84), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 56/283 (19%), Positives = 115/283 (40%), Gaps = 33/283 (11%)
Query: 1 MYLLANLMQLGGFFIWSYSYQLIKQSS-------VRYKALAQAAEPEEVPKEVNKDFDAN 53
MYLL QLG WSY Y+++ + + ++ + + EE E+ ++
Sbjct: 160 MYLLI-FSQLGQALRWSYGYRILLSPNQPEDPLPIGNRSWSHSDVNEE---EIQNLLASS 215
Query: 54 AQTQLLRGTTDDQEDVSVLVASTKSSSDPECQIIVPQASHLQTRKESFWKRSLEFLHQLL 113
A ++ + E +V S+ S + Q+ + S+ + + LL
Sbjct: 216 ANVDGVQNSVQANEGSTVQTDSSAISKNDNVQV---ETSNEEVGGFGAASSKISKFIVLL 272
Query: 114 EELLAPPTLAAIVGFIFGAVVWLRNLIIGDSAPLR-VIQDSIEILGDGTIPCITLILGGN 172
+ +PP + + V L+ + + + I I + G +P I ++LG +
Sbjct: 273 LDFFSPPLYSLFIALFIAVVPPLQRFFFEEGSFVEGSITSGIRMAGQVAVPMILVVLGAS 332
Query: 173 L---------IQGLRSSTLKPLIIIAVVCVRYIALPFIGVWVVKAAAALGFLP-----SD 218
L Q +R + +II+ ++ R + +P ++ A + L + D
Sbjct: 333 LATDISKTEPTQEVRKNNDTRVIIVCLLG-RMVVVPLA---LLPAFSLLSYFSEISTVDD 388
Query: 219 PLYHYVLMVQFTLPPAMNIGTMTQLFDVAQEECSVLFLWTYLV 261
P++ V+ + P A+ + + QL V + EC+ + W+Y V
Sbjct: 389 PVFVVVIFLLVGSPTAIQLTQICQLNGVFERECAKVLWWSYAV 431
>sp|Q3AFC6|HPPA_CARHZ Putative K(+)-stimulated pyrophosphate-energized sodium pump
OS=Carboxydothermus hydrogenoformans (strain Z-2901 /
DSM 6008) GN=hppA PE=1 SV=1
Length = 686
Score = 32.0 bits (71), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Query: 161 TIPCITLILGGNLIQGLRSSTLKPLIIIAVVCVRYIALPFIGVWVVKAAAALGFLPSDPL 220
T P +I G + G+RS+ L ++I+A + V Y A F G+ A AA+G L + +
Sbjct: 365 TGPATNIISG--IAVGMRSTYLPIIVIVAAIMVGYWAAGFYGI----ALAAMGMLATAAM 418
Query: 221 YHYVLMVQFTLPPAMNIGTMTQLFDVAQE 249
V+ V P A N G + ++ ++ E
Sbjct: 419 ---VVAVDSFGPVADNAGGIAEMAELGPE 444
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.138 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,149,947
Number of Sequences: 539616
Number of extensions: 3591330
Number of successful extensions: 12587
Number of sequences better than 100.0: 15
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 12576
Number of HSP's gapped (non-prelim): 19
length of query: 278
length of database: 191,569,459
effective HSP length: 116
effective length of query: 162
effective length of database: 128,974,003
effective search space: 20893788486
effective search space used: 20893788486
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 60 (27.7 bits)