BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023749
(278 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|449464238|ref|XP_004149836.1| PREDICTED: shikimate kinase, chloroplastic-like [Cucumis sativus]
gi|449522321|ref|XP_004168175.1| PREDICTED: shikimate kinase, chloroplastic-like [Cucumis sativus]
Length = 307
Score = 276 bits (707), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 141/230 (61%), Positives = 174/230 (75%), Gaps = 13/230 (5%)
Query: 43 LQYSIISRKPRITTRSIADDTTS-NTVTKVAAEDPSFAVKKKAADISTELKGTSVFLVGM 101
+Q S I R+ + + +A D T+ N KV +D S VKKKA D++ ELKGTS+FLVG+
Sbjct: 56 IQSSAIRRRRSLPSSCLASDGTALNVEAKVTVDDLSLEVKKKAMDVAPELKGTSIFLVGI 115
Query: 102 NNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEVLKQLS 161
N++IKT LGK LAD LRYYYFDSDSLV E +GGE+AAK +++SDEKG+Q ETEVLKQLS
Sbjct: 116 NSSIKTKLGKLLADVLRYYYFDSDSLVVEVSGGEAAAKLYKQSDEKGFQAFETEVLKQLS 175
Query: 162 SMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVA------RMDHSGF------PE 209
SMGRLVVCAGNGAVQSS NLALLRHGI+LWID+P M+A R H F
Sbjct: 176 SMGRLVVCAGNGAVQSSTNLALLRHGITLWIDLPLQMIAEEFAEDRSQHPVFDISTSGSY 235
Query: 210 SEVLPQLFALYKEMRDGYATADVTVSLQKVASQLGYDDLDAVTTEDMTLE 259
SEVL Q+ +LY++++DGYATAD +SLQK+AS+LGYDD +AVTTEDM +E
Sbjct: 236 SEVLGQITSLYQKVKDGYATADALISLQKLASKLGYDDFNAVTTEDMAME 285
>gi|225451543|ref|XP_002273840.1| PREDICTED: shikimate kinase, chloroplastic [Vitis vinifera]
gi|296082301|emb|CBI21306.3| unnamed protein product [Vitis vinifera]
Length = 305
Score = 273 bits (699), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 143/222 (64%), Positives = 167/222 (75%), Gaps = 17/222 (7%)
Query: 56 TRSIADDTTSNTVTKVAAEDPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLAD 115
T S+ D +S + TKV D S AVKKKA +IS LKGTS+FLVGMN+ IKT++GK LAD
Sbjct: 63 TFSLPDGASSISATKVVDVDLSLAVKKKAMEISPVLKGTSIFLVGMNSTIKTNVGKLLAD 122
Query: 116 ALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAV 175
ALRYY+FDSDSLV EA GGESAAK+ +E DEKG+ +ETEVLKQLSSMGRLVVCAG+G V
Sbjct: 123 ALRYYHFDSDSLVEEACGGESAAKSLKEQDEKGFHDSETEVLKQLSSMGRLVVCAGDGLV 182
Query: 176 QSSANLALLRHGISLWIDVPPGMVAR-MDHSGFP----------------ESEVLPQLFA 218
QSS NLALLRHGIS+WIDVP MVA+ M G +++V QL
Sbjct: 183 QSSTNLALLRHGISIWIDVPIEMVAKNMIEEGVQIPVTELSTAESYSETGDNQVFAQLAV 242
Query: 219 LYKEMRDGYATADVTVSLQKVASQLGYDDLDAVTTEDMTLEV 260
+Y+EM+ GYATAD +VSLQKVASQLGYDDLDAVTTEDM +EV
Sbjct: 243 VYEEMKGGYATADASVSLQKVASQLGYDDLDAVTTEDMAMEV 284
>gi|255543635|ref|XP_002512880.1| protein with unknown function [Ricinus communis]
gi|223547891|gb|EEF49383.1| protein with unknown function [Ricinus communis]
Length = 292
Score = 272 bits (696), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 146/241 (60%), Positives = 178/241 (73%), Gaps = 7/241 (2%)
Query: 27 PFSLLH--SQSYAPIRTSLQYSIISRKPRITTRSIADDTTSNTVTKVAAEDPSFAVKKKA 84
P LLH +QS T +++ +P ++T D T+ + T+V D S A+KK+A
Sbjct: 31 PSCLLHIRAQSSHSFSTLIKHKSQFYRPSLSTTCSLSDETTTSTTEVTVLDSSLALKKRA 90
Query: 85 ADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRES 144
ADIS ELKGTS+FLVGM +++KT LGK LAD+LRYYYFDSDSLV E A G SAAK+F+E+
Sbjct: 91 ADISPELKGTSIFLVGMRSSMKTSLGKLLADSLRYYYFDSDSLVEEVASGASAAKSFKET 150
Query: 145 DEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVARM-- 202
DEKG++++ETEVLKQLSSMGRLVVCAG+GAVQS NLALLRHGISLWIDVP MVA+
Sbjct: 151 DEKGFRESETEVLKQLSSMGRLVVCAGDGAVQSFTNLALLRHGISLWIDVPLDMVAQAMS 210
Query: 203 ---DHSGFPESEVLPQLFALYKEMRDGYATADVTVSLQKVASQLGYDDLDAVTTEDMTLE 259
D +SE L +L A ++ MR GYATAD T+SLQKVA LGYD LD+VT EDMTLE
Sbjct: 211 EESDQLSGADSEELTELIATFEAMRGGYATADATISLQKVAVNLGYDALDSVTAEDMTLE 270
Query: 260 V 260
V
Sbjct: 271 V 271
>gi|224129236|ref|XP_002328924.1| shikimate kinase [Populus trichocarpa]
gi|222839354|gb|EEE77691.1| shikimate kinase [Populus trichocarpa]
Length = 286
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 139/225 (61%), Positives = 177/225 (78%), Gaps = 9/225 (4%)
Query: 44 QYSIISRKPRIT-TRSIADDTTSNTVTKVAAEDPSFAVKKKAADISTELKGTSVFLVGMN 102
++ ++SR +T T S+ ++TT++T TKVA D S VKK+AAD+S ELKGTS+FL+GM
Sbjct: 42 KFPLVSRPTSLTATCSLPNETTTST-TKVAGADTSLQVKKRAADLSPELKGTSIFLLGMR 100
Query: 103 NAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEVLKQLSS 162
+KT+LGK LADALRYY+F+SDSLV EAAGGE AA++ +E DEKG++++ETEVLKQL+S
Sbjct: 101 GPLKTNLGKLLADALRYYFFNSDSLVEEAAGGEFAARSLKERDEKGFRESETEVLKQLTS 160
Query: 163 MGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVAR---MDHSGFP----ESEVLPQ 215
MGRLVVCAG+GAVQSS NL LLRHGISLWIDVP +VAR D + SEVL Q
Sbjct: 161 MGRLVVCAGDGAVQSSTNLGLLRHGISLWIDVPLDIVARGVVEDKTQLAASESHSEVLEQ 220
Query: 216 LFALYKEMRDGYATADVTVSLQKVASQLGYDDLDAVTTEDMTLEV 260
+ A Y+E+R GYATAD +SLQ +A +LGYD+LD+VTTED+ LEV
Sbjct: 221 VVATYEELRAGYATADAKISLQNIAVKLGYDELDSVTTEDLALEV 265
>gi|388510864|gb|AFK43498.1| unknown [Lotus japonicus]
Length = 280
Score = 270 bits (689), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 145/235 (61%), Positives = 171/235 (72%), Gaps = 16/235 (6%)
Query: 28 FSLLHSQSYAPIRTSLQYSIISRKPRITTRSIADDTTSNTVTKVAAEDPSFAVKKKAADI 87
F LH++ LQ+ R P IT SI ++V+ V A D S AVKKKAAD+
Sbjct: 37 FPTLHARP-----NPLQFR---RPPPITNCSIP-----SSVSNVGATDLSLAVKKKAADV 83
Query: 88 STELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEK 147
S EL+GTS+FLVGM ++KT LGK L +ALRYYYFDSDSLV EA GG SAA + R+SDEK
Sbjct: 84 SPELRGTSIFLVGMKGSLKTSLGKLLVEALRYYYFDSDSLVEEALGGVSAANSVRQSDEK 143
Query: 148 GYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVAR---MDH 204
G+ ++ETEVLKQLSSMGRLVVCAGNGAVQS NLALLRHGISLWIDVP +VAR D
Sbjct: 144 GFSESETEVLKQLSSMGRLVVCAGNGAVQSKTNLALLRHGISLWIDVPLDIVARDVIEDQ 203
Query: 205 SGFPESEVLPQLFALYKEMRDGYATADVTVSLQKVASQLGYDDLDAVTTEDMTLE 259
S F E + +L ALY + +DGYATAD +SLQKVAS+LGYD+LD +T EDM LE
Sbjct: 204 SQFAAFEEVNELGALYNKYKDGYATADAIISLQKVASRLGYDNLDDITKEDMALE 258
>gi|30688547|ref|NP_189325.2| shikimate kinase like 1 [Arabidopsis thaliana]
gi|186510473|ref|NP_001118711.1| shikimate kinase like 1 [Arabidopsis thaliana]
gi|186510475|ref|NP_001118712.1| shikimate kinase like 1 [Arabidopsis thaliana]
gi|75274423|sp|Q9LW20.1|SKL1_ARATH RecName: Full=Probable inactive shikimate kinase like 1,
chloroplastic; Short=AtSKL1; Flags: Precursor
gi|9279680|dbj|BAB01237.1| unnamed protein product [Arabidopsis thaliana]
gi|45752658|gb|AAS76227.1| At3g26900 [Arabidopsis thaliana]
gi|46402442|gb|AAS92323.1| At3g26900 [Arabidopsis thaliana]
gi|227202866|dbj|BAH56906.1| AT3G26900 [Arabidopsis thaliana]
gi|332643714|gb|AEE77235.1| shikimate kinase like 1 [Arabidopsis thaliana]
gi|332643715|gb|AEE77236.1| shikimate kinase like 1 [Arabidopsis thaliana]
gi|332643716|gb|AEE77237.1| shikimate kinase like 1 [Arabidopsis thaliana]
Length = 280
Score = 257 bits (656), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 138/265 (52%), Positives = 188/265 (70%), Gaps = 11/265 (4%)
Query: 1 MEIIAGTTATTMATQSITPKGLKFDPPFSLLHSQSYAPIRTSLQYSIISRKPRIT-TRSI 59
MEI + + + T+ P+ L P + + P+ +S +IS RI +RS+
Sbjct: 1 MEIFSASASLTLT--GFVPRLLPLLSPQA--RTTLCKPLLSSSSTRLISCHSRIAPSRSL 56
Query: 60 ADDTTSNTVTKVAAEDPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRY 119
AD + S ++ V DP VK+KA DI+ ELKG S+FLVG+NN+IKT+ GK LA+ALRY
Sbjct: 57 ADQSASTGIS-VVDSDPIDVVKRKAMDIAPELKGASIFLVGINNSIKTNTGKLLAEALRY 115
Query: 120 YYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSA 179
YYFDSD+L+ EAAGG +A+A +E+DEK +Q++ETEVLKQLSSMGRLVVCAG+GAVQS
Sbjct: 116 YYFDSDNLITEAAGGNVSAQALKEADEKAFQESETEVLKQLSSMGRLVVCAGDGAVQSLR 175
Query: 180 NLALLRHGISLWIDVPPGMVARMDHSGFPESEVLPQLF----ALYKEMRDGYATADVTVS 235
NLALLRHGIS+WIDVP + A+ D F SE P+LF A Y++ R GY TADV++S
Sbjct: 176 NLALLRHGISIWIDVPLDITAKGDDDSF-HSEPSPELFDTLKASYEKSRKGYETADVSIS 234
Query: 236 LQKVASQLGYDDLDAVTTEDMTLEV 260
L+K+A++L ++DL+AVT+ED+ LE+
Sbjct: 235 LEKIATKLEFEDLEAVTSEDIALEI 259
>gi|356498875|ref|XP_003518273.1| PREDICTED: shikimate kinase, chloroplastic [Glycine max]
Length = 280
Score = 256 bits (655), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 137/214 (64%), Positives = 161/214 (75%), Gaps = 15/214 (7%)
Query: 58 SIADDTTSNTVTKVAAEDPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADAL 117
S++D T S+++ A D S AVKKKAA++S+ELKGTS+FLVG+ +++KT LGK LADAL
Sbjct: 48 SVSDGTVSSSL---GATDSSLAVKKKAAEVSSELKGTSIFLVGLKSSLKTSLGKLLADAL 104
Query: 118 RYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQS 177
RYYYFDSDSLV EA GG AAK+FRESDEKG+ ++ETEVLKQLSSMGRLVVCAGNG V S
Sbjct: 105 RYYYFDSDSLVEEAVGGALAAKSFRESDEKGFYESETEVLKQLSSMGRLVVCAGNGTVTS 164
Query: 178 SANLALLRHGISLWIDVPPGMVAR---MDHSGFPES---------EVLPQLFALYKEMRD 225
S NLALLRHGISLWIDVP VAR D S F S EV +L ALY + R
Sbjct: 165 STNLALLRHGISLWIDVPLDFVARDVIEDKSQFAPSEISISGSYPEVQDELGALYDKYRV 224
Query: 226 GYATADVTVSLQKVASQLGYDDLDAVTTEDMTLE 259
GYATAD +S+QKV S+LG D+LD +T EDM LE
Sbjct: 225 GYATADAIISVQKVVSRLGCDNLDEITREDMALE 258
>gi|358249076|ref|NP_001239733.1| uncharacterized protein LOC100781076 [Glycine max]
gi|255640183|gb|ACU20382.1| unknown [Glycine max]
Length = 289
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 137/212 (64%), Positives = 160/212 (75%), Gaps = 12/212 (5%)
Query: 58 SIADDTTSNTVTKVAAEDPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADAL 117
S++D T ++V A + S AVKKKAA++S+ELKGTS+FLVG+ ++ KT LGK LADAL
Sbjct: 58 SVSDGTVPSSVG--ATDSSSLAVKKKAAEVSSELKGTSIFLVGLKSSFKTSLGKLLADAL 115
Query: 118 RYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQS 177
RYYYFDSD+LV EA GG AAK+FRESDEKG+ + ETEVLKQLSSMGRLVVCAGNGAV S
Sbjct: 116 RYYYFDSDNLVEEAVGGALAAKSFRESDEKGFYECETEVLKQLSSMGRLVVCAGNGAVTS 175
Query: 178 SANLALLRHGISLWIDVPPGMVAR---MDHSGFPESEV-----LP--QLFALYKEMRDGY 227
S NLALLRHGISLWIDVP VAR D S F SE+ P +L ALY R GY
Sbjct: 176 STNLALLRHGISLWIDVPLDFVARDVIEDQSQFAPSELSISGSYPEDELGALYDRYRVGY 235
Query: 228 ATADVTVSLQKVASQLGYDDLDAVTTEDMTLE 259
ATAD +S+QKVAS+LG D+LD +T EDM LE
Sbjct: 236 ATADAIISVQKVASRLGCDNLDEITREDMALE 267
>gi|297818234|ref|XP_002877000.1| shikimate kinase family protein [Arabidopsis lyrata subsp. lyrata]
gi|297322838|gb|EFH53259.1| shikimate kinase family protein [Arabidopsis lyrata subsp. lyrata]
Length = 280
Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 131/232 (56%), Positives = 174/232 (75%), Gaps = 8/232 (3%)
Query: 35 SYAPI-RTSLQYSIISRKPRIT-TRSIADDTTSNTVTKVAAEDPSFAVKKKAADISTELK 92
SY P+ +S +IS RI ++S+AD + S ++ V DP VK+KA DI+ ELK
Sbjct: 30 SYKPLLSSSFSNRLISSHSRIAPSQSLADQSASTGIS-VVDSDPIDVVKRKAMDIAPELK 88
Query: 93 GTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQA 152
G S+FLVG+NN+IKT+ GK LA+ALRYYYFDSD+L+ EAAGG +A+A +E+DEK +Q++
Sbjct: 89 GASIFLVGINNSIKTNTGKLLAEALRYYYFDSDNLITEAAGGNVSAQALKEADEKAFQES 148
Query: 153 ETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVARMDHSGFPESEV 212
ETEVLKQLSSMGRLVVCAG+GAVQS NLALLRHGIS+WIDVP + A+ D F SE
Sbjct: 149 ETEVLKQLSSMGRLVVCAGDGAVQSLTNLALLRHGISIWIDVPLDIAAKGDDDSF-NSEP 207
Query: 213 LPQLF----ALYKEMRDGYATADVTVSLQKVASQLGYDDLDAVTTEDMTLEV 260
P+LF A Y++ R GY TAD ++SL+K+A++L ++DL+AV +ED+ LEV
Sbjct: 208 SPELFDTLKASYEKSRKGYETADASISLEKIATKLEFEDLEAVASEDIALEV 259
>gi|147798826|emb|CAN61068.1| hypothetical protein VITISV_006589 [Vitis vinifera]
Length = 460
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 140/281 (49%), Positives = 164/281 (58%), Gaps = 80/281 (28%)
Query: 56 TRSIADDTTSNTVTKVAAEDPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLAD 115
T S+ D +S + TKV D S AVKKKA +IS LKGTS+FLVGMN+ IKT++GK LAD
Sbjct: 63 TFSLPDGASSISATKVVDVDLSLAVKKKAMEISPVLKGTSIFLVGMNSTIKTNVGKLLAD 122
Query: 116 ALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAE---------------------- 153
ALRYY+FDSDSLV EA GGESAAK+ +E DEKG+ +E
Sbjct: 123 ALRYYHFDSDSLVEEACGGESAAKSLKEQDEKGFHDSEVILLDFYPVACVSAYLCTGLGT 182
Query: 154 -----TEVLKQLSSMGRLVVCAGNGAVQSSANL--------------------------- 181
TEVLKQLSSMGRLVVCAG+G VQSS NL
Sbjct: 183 GIVKLTEVLKQLSSMGRLVVCAGDGLVQSSTNLYGNRFLVFLFLMLRQVICYGQNQFSYP 242
Query: 182 ---------ALLRHGISLWIDVPPGMVARM-----------------DHSGFPESEVLPQ 215
ALLRHGIS+WIDVP MVA+ +S +++V Q
Sbjct: 243 QPSSLNNDRALLRHGISIWIDVPIEMVAKNMIEEGVQIPVTELSTAESYSETGDNQVFAQ 302
Query: 216 LFALYKEMRDGYATADVTVSLQKVASQLGYDDLDAVTTEDM 256
L +Y+EM+ GYATAD +VSLQKVASQLGYDDLDAVTTEDM
Sbjct: 303 LAVVYEEMKGGYATADASVSLQKVASQLGYDDLDAVTTEDM 343
>gi|255631169|gb|ACU15950.1| unknown [Glycine max]
Length = 230
Score = 213 bits (543), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 119/192 (61%), Positives = 140/192 (72%), Gaps = 14/192 (7%)
Query: 53 RITTRSIADDTTSNTVTKVAAEDPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKF 112
R S++D T S+++ A D S AVKK AA++S+ELKGTS+FLVG+ +++KT LGK
Sbjct: 43 RRLNCSVSDGTVSSSL---GATDSSLAVKK-AAEVSSELKGTSIFLVGLKSSLKTSLGKL 98
Query: 113 LADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGN 172
LADALRYYYFDSDSLV EA GG AK+FRESDEKG+ ++ETEVLKQLS MGRLVVCAGN
Sbjct: 99 LADALRYYYFDSDSLVEEAVGGALVAKSFRESDEKGFYESETEVLKQLSPMGRLVVCAGN 158
Query: 173 GAVQSSANLALLRHGISLWIDVPPGMVAR---MDHSGFPESEV-----LP--QLFALYKE 222
G V SS NLALLRHGISLWIDVP VAR D S F SE+ P +L ALY +
Sbjct: 159 GTVTSSTNLALLRHGISLWIDVPLDFVARDVIEDKSQFAPSEISISGSYPEDELGALYDK 218
Query: 223 MRDGYATADVTV 234
R GYATAD +
Sbjct: 219 YRVGYATADAII 230
>gi|359489964|ref|XP_002269702.2| PREDICTED: shikimate kinase, chloroplastic-like [Vitis vinifera]
Length = 306
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 104/169 (61%), Positives = 125/169 (73%), Gaps = 17/169 (10%)
Query: 109 LGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVV 168
+GK LADAL YY+FD+DSLV EA GGESAAK+ +E DE+ ++ +ETEVLKQLSS G+L V
Sbjct: 86 MGKLLADALGYYHFDNDSLVEEACGGESAAKSLKEQDEEEFRDSETEVLKQLSSRGQLAV 145
Query: 169 CAGNGAVQSSANLALLRHGISLWIDVPPGMVAR-----------------MDHSGFPESE 211
CAGNG+V SS NLALLRHGIS+WIDVP MVA+ +S ++
Sbjct: 146 CAGNGSVHSSINLALLRHGISIWIDVPIEMVAKNVIEEGVQIPVTELSTAESYSETGGNQ 205
Query: 212 VLPQLFALYKEMRDGYATADVTVSLQKVASQLGYDDLDAVTTEDMTLEV 260
VL QL +Y+E + GYATAD +VSLQKVASQL YDDLDAVTTEDMT+EV
Sbjct: 206 VLAQLVMVYEERKGGYATADASVSLQKVASQLSYDDLDAVTTEDMTMEV 254
>gi|297737259|emb|CBI26460.3| unnamed protein product [Vitis vinifera]
Length = 299
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 104/164 (63%), Positives = 123/164 (75%), Gaps = 12/164 (7%)
Query: 109 LGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVV 168
+GK LADAL YY+FD+DSLV EA GGESAAK+ +E DE+ ++ +ETEVLKQLSS G+L V
Sbjct: 84 MGKLLADALGYYHFDNDSLVEEACGGESAAKSLKEQDEEEFRDSETEVLKQLSSRGQLAV 143
Query: 169 CAGNGAVQSSANLALLRHGISLWIDVPPGMVARM---DHSGFP---------ESEVLPQL 216
CAGNG+V SS NLALLRHGIS+WIDVP MVA+ + P SE QL
Sbjct: 144 CAGNGSVHSSINLALLRHGISIWIDVPIEMVAKNVIEEGVQIPVTELSTAESYSETGAQL 203
Query: 217 FALYKEMRDGYATADVTVSLQKVASQLGYDDLDAVTTEDMTLEV 260
+Y+E + GYATAD +VSLQKVASQL YDDLDAVTTEDMT+EV
Sbjct: 204 VMVYEERKGGYATADASVSLQKVASQLSYDDLDAVTTEDMTMEV 247
>gi|242083840|ref|XP_002442345.1| hypothetical protein SORBIDRAFT_08g018630 [Sorghum bicolor]
gi|241943038|gb|EES16183.1| hypothetical protein SORBIDRAFT_08g018630 [Sorghum bicolor]
Length = 273
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 86/197 (43%), Positives = 126/197 (63%), Gaps = 13/197 (6%)
Query: 75 DPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGG 134
+PS + +K A+ + + T +++VG + K ++ K LA+++ Y Y S+ L+ + GG
Sbjct: 58 NPSVDLLRKTAEAVGDFRKTPIYIVGTDCTAKRNIAKLLANSIIYRYLCSEELLEDVLGG 117
Query: 135 ESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDV 194
+ A +AF+ESDEKGY + ETE LKQL+SMG LV+C G+GAV +S NL LLRHG+S+WIDV
Sbjct: 118 KDALRAFKESDEKGYLEVETEGLKQLTSMGSLVLCCGDGAVMNSTNLGLLRHGVSIWIDV 177
Query: 195 PPGMVAR-----------MDHSGFPESEVLPQLFALYKEMRDGYATADVTVSLQKVASQL 243
P M A D F S+ + +L Y E+++ Y +D+TVS+Q VASQ
Sbjct: 178 PLEMAANDMLKSTGTQATTDPDSF--SQAMSKLRQRYDELKERYGVSDITVSVQSVASQR 235
Query: 244 GYDDLDAVTTEDMTLEV 260
GY +D+VT EDM LE+
Sbjct: 236 GYSSVDSVTLEDMVLEI 252
>gi|226500818|ref|NP_001150361.1| shikimate kinase family protein [Zea mays]
gi|195638646|gb|ACG38791.1| shikimate kinase family protein [Zea mays]
gi|414868512|tpg|DAA47069.1| TPA: shikimate kinase family protein [Zea mays]
Length = 273
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 85/197 (43%), Positives = 125/197 (63%), Gaps = 13/197 (6%)
Query: 75 DPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGG 134
+PS + ++ A+ + + T +++VG + K ++ K LA+++ Y Y S+ L+ + GG
Sbjct: 58 NPSVDLLRRTAEAVGDFRKTPIYIVGTDCTAKRNIAKLLANSIIYRYLSSEELLEDVLGG 117
Query: 135 ESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDV 194
+ A +AF+ESDEKGY + ETE LKQL+SMG LV+C G+GAV +S NL LLRHG+S+WIDV
Sbjct: 118 KDALRAFKESDEKGYLEVETEGLKQLTSMGSLVLCCGDGAVMNSTNLGLLRHGVSIWIDV 177
Query: 195 PPGMVAR-----------MDHSGFPESEVLPQLFALYKEMRDGYATADVTVSLQKVASQL 243
P M A D F S+ + +L Y E+++ Y +D+TVS+Q VASQ
Sbjct: 178 PLEMAANDMLKSTGTQATTDPDSF--SQAMSKLRQRYDELKERYGVSDITVSVQNVASQR 235
Query: 244 GYDDLDAVTTEDMTLEV 260
GY +D VT EDM LE+
Sbjct: 236 GYSSIDLVTLEDMVLEI 252
>gi|357134333|ref|XP_003568772.1| PREDICTED: shikimate kinase, chloroplastic-like [Brachypodium
distachyon]
Length = 273
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/197 (44%), Positives = 127/197 (64%), Gaps = 13/197 (6%)
Query: 75 DPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGG 134
+PS + +K A+ + + T +++VG + A K ++ K LA+ + Y Y SD L+ + GG
Sbjct: 58 NPSVDLLRKTAEAVGDFRKTPIYVVGTDCAAKRNIAKLLANCIIYRYLCSDDLLEDVLGG 117
Query: 135 ESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDV 194
+ A AF+ESDEKGY + ETE LKQL+SMG LV+C G+GAV +S NL LLRHG+S+WIDV
Sbjct: 118 KEALAAFKESDEKGYLEVETEGLKQLTSMGSLVLCCGDGAVMNSTNLGLLRHGVSIWIDV 177
Query: 195 P-----------PGMVARMDHSGFPESEVLPQLFALYKEMRDGYATADVTVSLQKVASQL 243
P G A D F S+ + +L Y E+++ YA +DVTVS+Q VASQL
Sbjct: 178 PLELAVNDMLKSMGAKATSDPDSF--SQAMGKLRQRYDELKERYAVSDVTVSVQNVASQL 235
Query: 244 GYDDLDAVTTEDMTLEV 260
GY +D+++ ED+ L++
Sbjct: 236 GYGSIDSLSLEDVVLDI 252
>gi|115433984|ref|NP_001041750.1| Os01g0102600 [Oryza sativa Japonica Group]
gi|113531281|dbj|BAF03664.1| Os01g0102600 [Oryza sativa Japonica Group]
gi|215694019|dbj|BAG89218.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218187341|gb|EEC69768.1| hypothetical protein OsI_00024 [Oryza sativa Indica Group]
gi|222617567|gb|EEE53699.1| hypothetical protein OsJ_00021 [Oryza sativa Japonica Group]
Length = 269
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 84/194 (43%), Positives = 125/194 (64%), Gaps = 10/194 (5%)
Query: 75 DPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGG 134
+PS + +K A+ + + T +++VG + K ++ K LA+++ Y Y S+ L+ + GG
Sbjct: 57 NPSVELLRKTAEAVGDFRKTPIYIVGTDCTAKRNIAKLLANSIIYRYLCSEELLEDVLGG 116
Query: 135 ESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDV 194
+ A AFRESD GY + ETE LKQL+SMG LV+C G+GAV +S NL LLRHG+S+WID+
Sbjct: 117 KDALNAFRESDLNGYLEVETEGLKQLTSMGSLVLCCGDGAVMNSTNLGLLRHGVSIWIDI 176
Query: 195 PPGMV--------ARMDHSGFPESEVLPQLFALYKEMRDGYATADVTVSLQKVASQLGYD 246
P +V A D F SE + ++ + E+++ Y +D+TVS+Q VASQLGY
Sbjct: 177 PLELVVNDMLKTQATSDPDSF--SEAMSRVRQRHDELKERYGVSDITVSVQNVASQLGYS 234
Query: 247 DLDAVTTEDMTLEV 260
+D+VT EDM LE+
Sbjct: 235 SIDSVTLEDMVLEI 248
>gi|52076607|dbj|BAD45509.1| unknown protein [Oryza sativa Japonica Group]
Length = 265
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 84/194 (43%), Positives = 125/194 (64%), Gaps = 10/194 (5%)
Query: 75 DPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGG 134
+PS + +K A+ + + T +++VG + K ++ K LA+++ Y Y S+ L+ + GG
Sbjct: 53 NPSVELLRKTAEAVGDFRKTPIYIVGTDCTAKRNIAKLLANSIIYRYLCSEELLEDVLGG 112
Query: 135 ESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDV 194
+ A AFRESD GY + ETE LKQL+SMG LV+C G+GAV +S NL LLRHG+S+WID+
Sbjct: 113 KDALNAFRESDLNGYLEVETEGLKQLTSMGSLVLCCGDGAVMNSTNLGLLRHGVSIWIDI 172
Query: 195 PPGMV--------ARMDHSGFPESEVLPQLFALYKEMRDGYATADVTVSLQKVASQLGYD 246
P +V A D F SE + ++ + E+++ Y +D+TVS+Q VASQLGY
Sbjct: 173 PLELVVNDMLKTQATSDPDSF--SEAMSRVRQRHDELKERYGVSDITVSVQNVASQLGYS 230
Query: 247 DLDAVTTEDMTLEV 260
+D+VT EDM LE+
Sbjct: 231 SIDSVTLEDMVLEI 244
>gi|15128455|dbj|BAB62639.1| P0402A09.24 [Oryza sativa Japonica Group]
gi|20804444|dbj|BAB92141.1| P0455C04.18 [Oryza sativa Japonica Group]
Length = 291
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 125/220 (56%), Gaps = 36/220 (16%)
Query: 75 DPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGG 134
+PS + +K A+ + + T +++VG + K ++ K LA+++ Y Y S+ L+ + GG
Sbjct: 53 NPSVELLRKTAEAVGDFRKTPIYIVGTDCTAKRNIAKLLANSIIYRYLCSEELLEDVLGG 112
Query: 135 ESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANL------------- 181
+ A AFRESD GY + ETE LKQL+SMG LV+C G+GAV +S NL
Sbjct: 113 KDALNAFRESDLNGYLEVETEGLKQLTSMGSLVLCCGDGAVMNSTNLYAAFTHHSLISHI 172
Query: 182 -------------ALLRHGISLWIDVPPGMV--------ARMDHSGFPESEVLPQLFALY 220
LLRHG+S+WID+P +V A D F SE + ++ +
Sbjct: 173 RLLINSSYANSLRGLLRHGVSIWIDIPLELVVNDMLKTQATSDPDSF--SEAMSRVRQRH 230
Query: 221 KEMRDGYATADVTVSLQKVASQLGYDDLDAVTTEDMTLEV 260
E+++ Y +D+TVS+Q VASQLGY +D+VT EDM LE+
Sbjct: 231 DELKERYGVSDITVSVQNVASQLGYSSIDSVTLEDMVLEI 270
>gi|168031989|ref|XP_001768502.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680215|gb|EDQ66653.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 300
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 89/198 (44%), Positives = 124/198 (62%), Gaps = 15/198 (7%)
Query: 73 AEDPS----FAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLV 128
AE+PS +K+KA ++ EL+GT +FL+GM + K +GK LA L YY+FDS+ LV
Sbjct: 90 AEEPSPDFDLLLKEKADELRDELQGTCIFLIGMMDNGKASVGKMLAKELGYYFFDSNDLV 149
Query: 129 FEAAGGESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGI 188
+AA GE ++ +E+GY++AETEVLKQLSSMGRLVV G G V ++ N LRHGI
Sbjct: 150 QQAADGEEISE-----NEEGYREAETEVLKQLSSMGRLVVATGAGTVLNTENWGYLRHGI 204
Query: 189 SLWIDVPPGMVARMDHSG---FPES---EVLPQLFALYKEMRDGYATADVTVSLQKVASQ 242
+WID+P VA+ + P S E L +L +Y+E ++ Y AD TVS+Q + +Q
Sbjct: 205 VVWIDIPVETVAKDAKTRQLLVPNSSDDEALSKLTKMYEERKEVYMNADATVSIQVLPAQ 264
Query: 243 LGYDDLDAVTTEDMTLEV 260
LG +D VT L+V
Sbjct: 265 LGIEDSSLVTPAMTALQV 282
>gi|302770076|ref|XP_002968457.1| hypothetical protein SELMODRAFT_169767 [Selaginella moellendorffii]
gi|300164101|gb|EFJ30711.1| hypothetical protein SELMODRAFT_169767 [Selaginella moellendorffii]
Length = 300
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 122/196 (62%), Gaps = 14/196 (7%)
Query: 79 AVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAA 138
A+K K +++ +LKGT +FL+GM + K+ +GK L+DAL YY+FDSD LV +AAGG S A
Sbjct: 83 ALKSKGKELARDLKGTCLFLIGMMGSGKSTVGKHLSDALGYYFFDSDKLVEQAAGGASVA 142
Query: 139 KAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVP-PG 197
+ F++S+E+G++ AE+EVL QLS M RLVV G GAV N +RHGI++++DVP
Sbjct: 143 QIFKQSNEEGFRDAESEVLSQLSGMYRLVVATGGGAVVRPQNWGYMRHGITVYLDVPLDA 202
Query: 198 MVARMDHSG-------------FPESEVLPQLFALYKEMRDGYATADVTVSLQKVASQLG 244
+ R+ +G F + L +L LY+E Y ADV+V L+ +A+++
Sbjct: 203 LAKRVVAAGTEKRPLLGEPQREFAHEQTLARLTKLYEERGMAYKNADVSVCLKMIANEMN 262
Query: 245 YDDLDAVTTEDMTLEV 260
D+ +T + L++
Sbjct: 263 AKDICELTPSIIALKI 278
>gi|302774428|ref|XP_002970631.1| hypothetical protein SELMODRAFT_147242 [Selaginella moellendorffii]
gi|300162147|gb|EFJ28761.1| hypothetical protein SELMODRAFT_147242 [Selaginella moellendorffii]
Length = 300
Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 78/196 (39%), Positives = 122/196 (62%), Gaps = 14/196 (7%)
Query: 79 AVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAA 138
A+K K +++ +LKGT +FL+GM + K+ +GK L+DAL YY+FDSD LV +AAGG S A
Sbjct: 83 ALKSKGKELARDLKGTCLFLIGMMGSGKSTVGKHLSDALGYYFFDSDKLVEQAAGGASVA 142
Query: 139 KAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVP-PG 197
+ F++S+E+G++ AE+EVL QLS M RLVV G GAV N +RHGI++++DVP
Sbjct: 143 QIFKQSNEEGFRDAESEVLSQLSGMYRLVVATGGGAVVRPQNWGYMRHGITVYLDVPLDA 202
Query: 198 MVARMDHSG-------------FPESEVLPQLFALYKEMRDGYATADVTVSLQKVASQLG 244
+ R+ +G F + L +L LY+E Y ADV+V L+ +A+++
Sbjct: 203 LAKRVVAAGTEKRPLLGEPQREFAHEQTLARLTKLYEERGMAYKNADVSVCLKMIANEMN 262
Query: 245 YDDLDAVTTEDMTLEV 260
D+ +T + +++
Sbjct: 263 AKDICELTPSIIAVKI 278
>gi|116787038|gb|ABK24350.1| unknown [Picea sitchensis]
Length = 318
Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 116/185 (62%), Gaps = 13/185 (7%)
Query: 77 SFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGES 136
+ +KKKA +I LKG ++LVGM + KT +GK L++ L YY+FDSD LV EA+GG S
Sbjct: 103 TLILKKKAEEIIPHLKGKCIYLVGMMGSGKTTVGKILSEVLGYYFFDSDQLVEEASGGAS 162
Query: 137 AAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVP- 195
A+ F+E +E+G++ +E+EVLKQLS+M RLV+ G GAV N +R GI++W+DVP
Sbjct: 163 VAQIFKERNEQGFRDSESEVLKQLSTMYRLVIATGGGAVVRPQNWNYMRQGITVWLDVPL 222
Query: 196 PGMVARMDHSGFPE------------SEVLPQLFALYKEMRDGYATADVTVSLQKVASQL 243
+ AR+ G S+ L +L LY++ + Y ++DV VSL+ +A +L
Sbjct: 223 EALAARVVAVGTESRPLLGQASDDCYSQALTRLTKLYEDRAEAYKSSDVKVSLRDIAVEL 282
Query: 244 GYDDL 248
G D+
Sbjct: 283 GNKDV 287
>gi|414868513|tpg|DAA47070.1| TPA: hypothetical protein ZEAMMB73_523115 [Zea mays]
Length = 245
Score = 143 bits (360), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 71/174 (40%), Positives = 109/174 (62%), Gaps = 13/174 (7%)
Query: 75 DPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGG 134
+PS + ++ A+ + + T +++VG + K ++ K LA+++ Y Y S+ L+ + GG
Sbjct: 58 NPSVDLLRRTAEAVGDFRKTPIYIVGTDCTAKRNIAKLLANSIIYRYLSSEELLEDVLGG 117
Query: 135 ESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDV 194
+ A +AF+ESDEKGY + ETE LKQL+SMG LV+C G+GAV +S NL LLRHG+S+WIDV
Sbjct: 118 KDALRAFKESDEKGYLEVETEGLKQLTSMGSLVLCCGDGAVMNSTNLGLLRHGVSIWIDV 177
Query: 195 PPGMVAR-----------MDHSGFPESEVLPQLFALYKEMRDGYATADVTVSLQ 237
P M A D F S+ + +L Y E+++ Y +D+TVS+Q
Sbjct: 178 PLEMAANDMLKSTGTQATTDPDSF--SQAMSKLRQRYDELKERYGVSDITVSVQ 229
>gi|357138119|ref|XP_003570645.1| PREDICTED: shikimate kinase, chloroplastic-like [Brachypodium
distachyon]
Length = 305
Score = 136 bits (343), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 122/211 (57%), Gaps = 13/211 (6%)
Query: 75 DPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGG 134
D + +K+K+ D+ L G ++LVGM + K+ +GK LA+ L Y +FDSD LV ++ G
Sbjct: 79 DEALLLKRKSEDVLFHLNGRCIYLVGMMGSGKSTVGKILAEVLGYSFFDSDKLVEQSVGM 138
Query: 135 ESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDV 194
S A+ F+ E ++ ET VL+ LSSM RLVV G GAV N ++ G+S+W+DV
Sbjct: 139 PSVAQIFKVHSEAFFRDNETSVLRDLSSMRRLVVATGGGAVIRPVNWKNMKKGLSVWLDV 198
Query: 195 PPGMVAR------------MDH-SGFPESEVLPQLFALYKEMRDGYATADVTVSLQKVAS 241
P +AR +D SG P + +L L ++ D YA ADV VSL+++AS
Sbjct: 199 PLEALARRIAKVGTASRPLLDQPSGDPYTMAFSKLSTLAEQRGDAYANADVRVSLEEIAS 258
Query: 242 QLGYDDLDAVTTEDMTLEVKWLYNASISDPT 272
+LG+DD+ +T D+ LE + + +++ T
Sbjct: 259 KLGHDDVSKLTPIDIALESLYKIESFVTEDT 289
>gi|326533332|dbj|BAJ93638.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 304
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 121/211 (57%), Gaps = 19/211 (9%)
Query: 62 DTTSNTVTKVAAEDPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYY 121
D N+V D + +K+K+ ++ +L G ++LVGM + K+ +GK LA+ L Y +
Sbjct: 71 DNLHNSV------DDALLLKRKSEEVLFQLNGRCIYLVGMMGSGKSTVGKILAEVLGYSF 124
Query: 122 FDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANL 181
FDSD LV +A G S A+ F+ E ++ E+ VL+ LSSM RLVV G GAV N
Sbjct: 125 FDSDKLVEQAVGMPSVAQIFKVHGEAFFRDNESSVLRDLSSMRRLVVATGGGAVIRPVNW 184
Query: 182 ALLRHGISLWIDVPPGMVAR------------MDH-SGFPESEVLPQLFALYKEMRDGYA 228
++ G+S+W+DVP +AR +D SG P + +L L ++ D YA
Sbjct: 185 KNMKKGLSVWLDVPLEALARRIAKVGTASRPLLDQPSGDPYTMAFSKLSTLAEQRGDAYA 244
Query: 229 TADVTVSLQKVASQLGYDDLDAVTTEDMTLE 259
ADV VSL+++AS+LG+DD+ +T D+ LE
Sbjct: 245 NADVRVSLEEIASKLGHDDVSKLTPIDIALE 275
>gi|357124743|ref|XP_003564057.1| PREDICTED: shikimate kinase, chloroplastic-like [Brachypodium
distachyon]
Length = 302
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 121/215 (56%), Gaps = 19/215 (8%)
Query: 58 SIADDTTSNTVTKVAAEDPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADAL 117
S +T N+V D + +K+KA ++ EL G ++LVGM + K+ +GK LA+ L
Sbjct: 72 SRGQETLHNSV------DEALLLKRKAEEVLFELNGRCIYLVGMMGSGKSTVGKILAEVL 125
Query: 118 RYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQS 177
Y YFDSDSLV +A G S A+ F+ E ++ E+ VL+ LSSM RLVV G GAV
Sbjct: 126 GYSYFDSDSLVEQAVGMPSVAQIFKVHSEAFFRDNESSVLRDLSSMQRLVVATGGGAVIR 185
Query: 178 SANLALLRHGISLWIDVPPGMVAR------------MDH-SGFPESEVLPQLFALYKEMR 224
N ++ G+S+ +DVP +A+ +D SG P + +L L ++
Sbjct: 186 PVNWRYMKKGLSIMLDVPLDALAKRIAQVGTASRPLLDQPSGDPYTAAFTKLSMLAEQRG 245
Query: 225 DGYATADVTVSLQKVASQLGYDDLDAVTTEDMTLE 259
D YA ADV VSL+ +A++ G+DD+ +T D+ +E
Sbjct: 246 DAYANADVRVSLEDIAAKQGHDDVSQLTPTDIAIE 280
>gi|125541140|gb|EAY87535.1| hypothetical protein OsI_08943 [Oryza sativa Indica Group]
Length = 401
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 122/220 (55%), Gaps = 19/220 (8%)
Query: 53 RITTRSIADDTTSNTVTKVAAEDPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKF 112
R S +T N+V D + +K+K+ ++ L G ++LVGM + K+ +GK
Sbjct: 62 RAKKSSGGHETLHNSV------DEALLLKRKSEEVLFYLNGRCIYLVGMMGSGKSTVGKI 115
Query: 113 LADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGN 172
+++ L Y +FDSD LV +A G S A+ F+ E ++ E+ VL+ LSSM RLVV G
Sbjct: 116 MSEVLGYSFFDSDKLVEQAVGMPSVAQIFKVHSEAFFRDNESSVLRDLSSMKRLVVATGG 175
Query: 173 GAVQSSANLALLRHGISLWIDVPPGMVAR------------MDH-SGFPESEVLPQLFAL 219
GAV N ++ G+S+W+DVP +AR +D SG P + +L L
Sbjct: 176 GAVIRPVNWKYMKKGLSVWLDVPLDALARRIAKVGTASRPLLDQPSGDPYTMAFSKLSML 235
Query: 220 YKEMRDGYATADVTVSLQKVASQLGYDDLDAVTTEDMTLE 259
++ D YA ADV VSL+++AS+ G+DD+ +T D+ +E
Sbjct: 236 AEQRGDAYANADVRVSLEEIASKQGHDDVSKLTPTDIAIE 275
>gi|222623677|gb|EEE57809.1| hypothetical protein OsJ_08387 [Oryza sativa Japonica Group]
Length = 464
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 122/220 (55%), Gaps = 19/220 (8%)
Query: 53 RITTRSIADDTTSNTVTKVAAEDPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKF 112
R S +T N+V D + +K+K+ ++ L G ++LVGM + K+ +GK
Sbjct: 62 RAKKSSGGHETLHNSV------DEALLLKRKSEEVLFYLNGRCIYLVGMMGSGKSTVGKI 115
Query: 113 LADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGN 172
+++ L Y +FDSD LV +A G S A+ F+ E ++ E+ VL+ LSSM RLVV G
Sbjct: 116 MSEVLGYSFFDSDKLVEQAVGMPSVAQIFKVHSEAFFRDNESSVLRDLSSMKRLVVATGG 175
Query: 173 GAVQSSANLALLRHGISLWIDVPPGMVAR------------MDH-SGFPESEVLPQLFAL 219
GAV N ++ G+S+W+DVP +AR +D SG P + +L L
Sbjct: 176 GAVIRPVNWKYMKKGLSVWLDVPLDALARRIAKVGTASRPLLDQPSGDPYTMAFSKLSML 235
Query: 220 YKEMRDGYATADVTVSLQKVASQLGYDDLDAVTTEDMTLE 259
++ D YA ADV VSL+++AS+ G+DD+ +T D+ +E
Sbjct: 236 AEQRGDAYANADVRVSLEEIASKQGHDDVSKLTPTDIAIE 275
>gi|225463131|ref|XP_002265897.1| PREDICTED: shikimate kinase, chloroplastic [Vitis vinifera]
gi|297739345|emb|CBI29335.3| unnamed protein product [Vitis vinifera]
Length = 292
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/239 (34%), Positives = 135/239 (56%), Gaps = 20/239 (8%)
Query: 42 SLQY-SIISRKPRIT---TRSIADDTTSNTVTK---VAAEDPSFAVKKKAADISTELKGT 94
SLQ+ S SR+ R++ + D+ + V A D ++ +KKK ++++ L G
Sbjct: 36 SLQWRSCSSRQRRVSLGISSHYCKDSQAPAVESGNFYACFDGNWLLKKKGQEVASNLNGR 95
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+FLVGM + KT +GK L++AL Y + DSD+ V +A GG S ++ F + EK ++ E+
Sbjct: 96 CIFLVGMMGSGKTTVGKILSEALGYSFVDSDTFVEKAVGGTSVSQIFNQCGEKFFRDYES 155
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVAR-----------MD 203
E L++L+S+ + VV G GAV N ++ G+S+++DVP +AR +
Sbjct: 156 EALRKLASIPKQVVATGGGAVVRPINWKYMKQGVSVFLDVPLDTLARRIADVGTDSRPLL 215
Query: 204 H--SGFPESEVLPQLFALYKEMRDGYATADVTVSLQKVASQLGYDDLDAVTTEDMTLEV 260
H SG ++ LF L K+ + YA AD TVSLQ +A++LG +D+ +T + +EV
Sbjct: 216 HFESGDAYTKAFVGLFTLSKKRTEAYANADATVSLQHIAARLGLEDISDITPAAIAMEV 274
>gi|75107690|sp|Q5NTH4.1|SK1_ORYSJ RecName: Full=Shikimate kinase 1, chloroplastic; Short=OsSK1;
Flags: Precursor
gi|56805577|dbj|BAD83412.1| shikimate kinase 1 [Oryza sativa Japonica Group]
Length = 308
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 122/220 (55%), Gaps = 19/220 (8%)
Query: 53 RITTRSIADDTTSNTVTKVAAEDPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKF 112
R S +T N+V D + +K+K+ ++ L G ++LVGM + K+ +GK
Sbjct: 62 RAKKSSGGHETLHNSV------DEALLLKRKSEEVLFYLNGRCIYLVGMMGSGKSTVGKI 115
Query: 113 LADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGN 172
+++ L Y +FDSD LV +A G S A+ F+ E ++ E+ VL+ LSSM RLVV G
Sbjct: 116 MSEVLGYSFFDSDKLVEQAVGMPSVAQIFKVHSEAFFRDNESSVLRDLSSMKRLVVATGG 175
Query: 173 GAVQSSANLALLRHGISLWIDVPPGMVAR------------MDH-SGFPESEVLPQLFAL 219
GAV N ++ G+S+W+DVP +AR +D SG P + +L L
Sbjct: 176 GAVIRPVNWKYMKKGLSVWLDVPLDALARRIAKVGTASRPLLDQPSGDPYTMAFSKLSML 235
Query: 220 YKEMRDGYATADVTVSLQKVASQLGYDDLDAVTTEDMTLE 259
++ D YA ADV VSL+++AS+ G+DD+ +T D+ +E
Sbjct: 236 AEQRGDAYANADVRVSLEEIASKQGHDDVSKLTPTDIAIE 275
>gi|326530582|dbj|BAJ97717.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 301
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 115/198 (58%), Gaps = 13/198 (6%)
Query: 75 DPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGG 134
D + +K+KA D+ L V+LVGM + KT +GK +A+ L Y +FDSD LV ++ G
Sbjct: 87 DEALVLKQKAEDVLPYLNDRCVYLVGMMGSGKTTVGKIIAEVLGYSFFDSDKLVEQSVGI 146
Query: 135 ESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDV 194
S A+ F+ E ++ E+EVL+ LSSM RL+V G GAV N + +R G+++W+DV
Sbjct: 147 PSVAEIFQVHSEAFFRDNESEVLRDLSSMHRLIVATGGGAVIRPINWSYMRKGLTIWLDV 206
Query: 195 PPGMVAR------------MDH-SGFPESEVLPQLFALYKEMRDGYATADVTVSLQKVAS 241
P +AR + H SG P ++ +L L+++ D YA AD VSL+ +A
Sbjct: 207 PVDALARRIAAVGTASRPLLHHESGDPYAKAYAKLATLFEQRMDSYANADARVSLENIAF 266
Query: 242 QLGYDDLDAVTTEDMTLE 259
+ G++D++ +T + +E
Sbjct: 267 RQGHNDVNVLTPSAIAIE 284
>gi|242077364|ref|XP_002448618.1| hypothetical protein SORBIDRAFT_06g030260 [Sorghum bicolor]
gi|241939801|gb|EES12946.1| hypothetical protein SORBIDRAFT_06g030260 [Sorghum bicolor]
Length = 300
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 114/198 (57%), Gaps = 13/198 (6%)
Query: 75 DPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGG 134
D + +++KA D+ L G V+LVGM + KT +GK LA+ L Y +FDSD LV +A G
Sbjct: 86 DEALILQQKAQDVLPYLDGRCVYLVGMMGSGKTTVGKILAEVLGYSFFDSDKLVEKAVGI 145
Query: 135 ESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDV 194
S A+ F+ E ++ E+EVL+ LSSM RLVV G GAV N + ++ G+++W+DV
Sbjct: 146 SSVAEIFQLHSEAFFRDNESEVLRDLSSMHRLVVATGGGAVIRPINWSYMKKGLTVWLDV 205
Query: 195 PPGMVARM-------------DHSGFPESEVLPQLFALYKEMRDGYATADVTVSLQKVAS 241
P +AR SG P ++ +L +L+++ D YA AD VSL+ +A
Sbjct: 206 PLDALARRIAAVGTASRPLLHQESGDPYAKAYAKLTSLFEQRMDSYANADARVSLEHIAL 265
Query: 242 QLGYDDLDAVTTEDMTLE 259
+ G++D+ +T + +E
Sbjct: 266 KQGHNDVTILTPSAIAIE 283
>gi|224035559|gb|ACN36855.1| unknown [Zea mays]
Length = 247
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 114/198 (57%), Gaps = 13/198 (6%)
Query: 75 DPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGG 134
D + +K+K+ ++ L G ++LVGM + K+ +GK +++ L Y +FDSD LV +A G
Sbjct: 17 DEALLLKRKSEEVLFYLNGRCIYLVGMMGSGKSTVGKIMSEVLGYSFFDSDKLVEQAVGM 76
Query: 135 ESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDV 194
S A+ F+ E ++ E+ VL+ LSSM RLVV G GAV N ++ G+S+W+DV
Sbjct: 77 PSVAQIFKVHSEAFFRDNESSVLRDLSSMRRLVVATGGGAVIRPINWRYMKRGLSVWLDV 136
Query: 195 PPGMVAR------------MDH-SGFPESEVLPQLFALYKEMRDGYATADVTVSLQKVAS 241
P +AR +D SG P + +L L ++ D YA ADV VSL+++A
Sbjct: 137 PLDALARRIAKVGTASRPLLDQPSGDPYAMAFSKLSMLAQQRGDAYANADVRVSLEEIAC 196
Query: 242 QLGYDDLDAVTTEDMTLE 259
+ G+DD+ +T D+ +E
Sbjct: 197 KQGHDDVSKLTPTDIAIE 214
>gi|357166256|ref|XP_003580651.1| PREDICTED: shikimate kinase, chloroplastic-like [Brachypodium
distachyon]
Length = 298
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/198 (37%), Positives = 112/198 (56%), Gaps = 13/198 (6%)
Query: 75 DPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGG 134
D + +K+KA D+ L V+LVGM + KT +GK +A+ L Y +FDSD LV +A G
Sbjct: 84 DEALILKQKAEDVLPCLNDRCVYLVGMMGSGKTTVGKIIAEVLGYSFFDSDKLVEQAVGI 143
Query: 135 ESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDV 194
S A+ F+ E ++ E+EVL+ LSSM RLVV G GAV N + +R G+++W+DV
Sbjct: 144 SSVAEIFQVHSEAFFRDNESEVLRDLSSMHRLVVATGGGAVIRPINWSYMRKGLTIWLDV 203
Query: 195 PPGMVAR-------------MDHSGFPESEVLPQLFALYKEMRDGYATADVTVSLQKVAS 241
P +AR SG ++ +L AL ++ D YA AD VSL+ VA
Sbjct: 204 PLDALARRIAAVGTASRPLLHQESGDTYAKAYAKLTALLEKRMDSYANADARVSLENVAF 263
Query: 242 QLGYDDLDAVTTEDMTLE 259
+ G+DD++ +T + +E
Sbjct: 264 KHGHDDVNVLTPSAIAIE 281
>gi|147856126|emb|CAN80290.1| hypothetical protein VITISV_016550 [Vitis vinifera]
Length = 294
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/239 (34%), Positives = 133/239 (55%), Gaps = 20/239 (8%)
Query: 42 SLQY-SIISRKPRIT---TRSIADDTTSNTVTK---VAAEDPSFAVKKKAADISTELKGT 94
SLQ+ S SR+ R++ + D+ + V A D ++ +KKK ++++ L G
Sbjct: 36 SLQWRSCSSRQRRVSLGISSHYCKDSQAPAVESGNFYACFDGNWLLKKKGQEVASNLNGR 95
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+FLVGM + KT +GK L++ L Y + DSD+ V +A GG S ++ F + EK ++ E+
Sbjct: 96 CIFLVGMMGSGKTTVGKILSEXLGYSFVDSDTFVEKAVGGTSVSQIFNQCGEKFFRDYES 155
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVAR-----------MD 203
E L++L+S+ + VV G GAV N ++ G+S+++DVP +AR +
Sbjct: 156 EALRKLASIPKQVVATGGGAVVRPINWKYMKQGVSVFLDVPLDXLARRIADVGTDSRPLL 215
Query: 204 H--SGFPESEVLPQLFALYKEMRDGYATADVTVSLQKVASQLGYDDLDAVTTEDMTLEV 260
H SG ++ LF L K+ + YA AD TVSLQ +A+ LG +D+ VT + +EV
Sbjct: 216 HFESGDAYTKAFVGLFTLSKKRTEAYANADATVSLQHIAASLGLEDISDVTPAAIAMEV 274
>gi|226505012|ref|NP_001152400.1| shikimate kinase [Zea mays]
gi|195655879|gb|ACG47407.1| shikimate kinase [Zea mays]
Length = 307
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 114/198 (57%), Gaps = 13/198 (6%)
Query: 75 DPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGG 134
D + +K+K+ ++ L G ++LVGM + K+ +GK +++ L Y +FDSD LV +A G
Sbjct: 77 DEALLLKRKSEEVLFYLNGRCIYLVGMMGSGKSTVGKIMSEVLGYSFFDSDKLVEQAVGM 136
Query: 135 ESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDV 194
S A+ F+ E ++ E+ VL+ LSSM RLVV G GAV N ++ G+S+W+DV
Sbjct: 137 PSVAQIFKVHSEAFFRDNESSVLRDLSSMRRLVVATGGGAVIRPINWRYMKKGLSVWLDV 196
Query: 195 PPGMVAR------------MDH-SGFPESEVLPQLFALYKEMRDGYATADVTVSLQKVAS 241
P +AR +D SG P + +L L ++ D YA ADV VSL+++A
Sbjct: 197 PLDALARRIAKVGTASRPLLDQPSGDPYAMAFSKLSMLAQQRGDAYANADVRVSLEEIAC 256
Query: 242 QLGYDDLDAVTTEDMTLE 259
+ G+DD+ +T D+ +E
Sbjct: 257 KQGHDDVSKLTPTDIAIE 274
>gi|413938896|gb|AFW73447.1| shikimate kinase [Zea mays]
Length = 305
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 114/198 (57%), Gaps = 13/198 (6%)
Query: 75 DPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGG 134
D + +K+K+ ++ L G ++LVGM + K+ +GK +++ L Y +FDSD LV +A G
Sbjct: 75 DEALLLKRKSEEVLFYLNGRCIYLVGMMGSGKSTVGKIMSEVLGYSFFDSDKLVEQAVGM 134
Query: 135 ESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDV 194
S A+ F+ E ++ E+ VL+ LSSM RLVV G GAV N ++ G+S+W+DV
Sbjct: 135 PSVAQIFKVHSEAFFRDNESSVLRDLSSMRRLVVATGGGAVIRPINWRYMKRGLSVWLDV 194
Query: 195 PPGMVAR------------MDH-SGFPESEVLPQLFALYKEMRDGYATADVTVSLQKVAS 241
P +AR +D SG P + +L L ++ D YA ADV VSL+++A
Sbjct: 195 PLDALARRIAKVGTASRPLLDQPSGDPYAMAFSKLSMLAQQRGDAYANADVRVSLEEIAC 254
Query: 242 QLGYDDLDAVTTEDMTLE 259
+ G+DD+ +T D+ +E
Sbjct: 255 KQGHDDVSKLTPTDIAIE 272
>gi|297605427|ref|NP_001057199.2| Os06g0225800 [Oryza sativa Japonica Group]
gi|75107689|sp|Q5NTH3.1|SK2_ORYSJ RecName: Full=Shikimate kinase 2, chloroplastic; Short=OsSK2;
Flags: Precursor
gi|56805579|dbj|BAD83413.1| shikimate kinase 2 [Oryza sativa Japonica Group]
gi|218197836|gb|EEC80263.1| hypothetical protein OsI_22231 [Oryza sativa Indica Group]
gi|255676848|dbj|BAF19113.2| Os06g0225800 [Oryza sativa Japonica Group]
Length = 307
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 118/211 (55%), Gaps = 19/211 (9%)
Query: 62 DTTSNTVTKVAAEDPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYY 121
D+ N+V D + +K+K+ ++ L G ++LVGM + K+ + K LA+ L Y +
Sbjct: 69 DSLHNSV------DEALLLKRKSEEVLFYLNGRCIYLVGMMGSGKSTVAKILAEVLGYSF 122
Query: 122 FDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANL 181
FDSD LV +A G S A+ F+E E ++ E+ VL+ LSSM RLVV G GAV N
Sbjct: 123 FDSDKLVEQAVGMPSVAQIFKEHSEAFFRDNESSVLRDLSSMRRLVVATGGGAVIRPVNW 182
Query: 182 ALLRHGISLWIDVPPGMVAR------------MDH-SGFPESEVLPQLFALYKEMRDGYA 228
++ G+S+W+DVP +AR +D S P + +L L ++ D YA
Sbjct: 183 KYMKKGLSVWLDVPLDALARRIAQVGTASRPLLDQPSSDPYTAAFSKLSMLAEQRGDAYA 242
Query: 229 TADVTVSLQKVASQLGYDDLDAVTTEDMTLE 259
AD VSL+++A++ G+DD+ +T D+ +E
Sbjct: 243 NADARVSLEEIAAKQGHDDVSKLTPTDIAIE 273
>gi|222635237|gb|EEE65369.1| hypothetical protein OsJ_20662 [Oryza sativa Japonica Group]
Length = 272
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 119/214 (55%), Gaps = 19/214 (8%)
Query: 59 IADDTTSNTVTKVAAEDPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALR 118
+ D+ N+V D + +K+K+ ++ L G ++LVGM + K+ + K LA+ L
Sbjct: 31 LGHDSLHNSV------DEALLLKRKSEEVLFYLNGRCIYLVGMMGSGKSTVAKILAEVLG 84
Query: 119 YYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSS 178
Y +FDSD LV +A G S A+ F+E E ++ E+ VL+ LSSM RLVV G GAV
Sbjct: 85 YSFFDSDKLVEQAVGMPSVAQIFKEHSEAFFRDNESSVLRDLSSMRRLVVATGGGAVIRP 144
Query: 179 ANLALLRHGISLWIDVPPGMVAR------------MDH-SGFPESEVLPQLFALYKEMRD 225
N ++ G+S+W+DVP +AR +D S P + +L L ++ D
Sbjct: 145 VNWKYMKKGLSVWLDVPLDALARRIAQVGTASRPLLDQPSSDPYTAAFSKLSMLAEQRGD 204
Query: 226 GYATADVTVSLQKVASQLGYDDLDAVTTEDMTLE 259
YA AD VSL+++A++ G+DD+ +T D+ +E
Sbjct: 205 AYANADARVSLEEIAAKQGHDDVSKLTPTDIAIE 238
>gi|414585207|tpg|DAA35778.1| TPA: shikimate kinase [Zea mays]
Length = 292
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 113/198 (57%), Gaps = 13/198 (6%)
Query: 75 DPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGG 134
D + +++KA D+ L G V+LVGM + KT +GK L++ L Y +FDSD LV +A G
Sbjct: 78 DDALILQQKAQDVLPYLDGRCVYLVGMMGSGKTTVGKILSEVLGYSFFDSDKLVEKAVGI 137
Query: 135 ESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDV 194
S A+ F+ E ++ E+EVL LSSM RLVV G GAV N + ++ G+++W+DV
Sbjct: 138 SSVAEIFQLHSETFFRDNESEVLTDLSSMHRLVVATGGGAVIRPINWSYMKKGLTVWLDV 197
Query: 195 PPGMVARM-------------DHSGFPESEVLPQLFALYKEMRDGYATADVTVSLQKVAS 241
P +AR SG P ++ +L +L+++ D YA AD VSL+ +A
Sbjct: 198 PLDALARRIAAVGTASRPLLHQESGDPYAKAYAKLTSLFEQRMDSYANADARVSLEHIAL 257
Query: 242 QLGYDDLDAVTTEDMTLE 259
+ G++D+ +T + +E
Sbjct: 258 KQGHNDVTILTPSTIAIE 275
>gi|195638244|gb|ACG38590.1| shikimate kinase [Zea mays]
Length = 293
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 113/198 (57%), Gaps = 13/198 (6%)
Query: 75 DPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGG 134
D + +++KA D+ L G V+LVGM + KT +GK L++ L Y +FDSD LV +A G
Sbjct: 79 DDALILQQKAQDVLPYLDGRCVYLVGMMGSGKTTVGKILSEVLGYSFFDSDKLVEKAVGI 138
Query: 135 ESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDV 194
S A+ F+ E ++ E+EVL LSSM RLVV G GAV N + ++ G+++W+DV
Sbjct: 139 SSVAEIFQLHSETFFRDNESEVLTDLSSMHRLVVATGGGAVIRPINWSYMKKGLTVWLDV 198
Query: 195 PPGMVARM-------------DHSGFPESEVLPQLFALYKEMRDGYATADVTVSLQKVAS 241
P +AR SG P ++ +L +L+++ D YA AD VSL+ +A
Sbjct: 199 PLDALARRIAAVGTASRPLLHQESGDPYAKAYAKLTSLFEQRMDSYANADARVSLEHIAL 258
Query: 242 QLGYDDLDAVTTEDMTLE 259
+ G++D+ +T + +E
Sbjct: 259 KQGHNDVTILTPSTIAIE 276
>gi|212275149|ref|NP_001130232.1| hypothetical protein [Zea mays]
gi|194688616|gb|ACF78392.1| unknown [Zea mays]
gi|223973151|gb|ACN30763.1| unknown [Zea mays]
gi|414585206|tpg|DAA35777.1| TPA: hypothetical protein ZEAMMB73_776202 [Zea mays]
Length = 293
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 113/198 (57%), Gaps = 13/198 (6%)
Query: 75 DPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGG 134
D + +++KA D+ L G V+LVGM + KT +GK L++ L Y +FDSD LV +A G
Sbjct: 79 DDALILQQKAQDVLPYLDGRCVYLVGMMGSGKTTVGKILSEVLGYSFFDSDKLVEKAVGI 138
Query: 135 ESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDV 194
S A+ F+ E ++ E+EVL LSSM RLVV G GAV N + ++ G+++W+DV
Sbjct: 139 SSVAEIFQLHSETFFRDNESEVLTDLSSMHRLVVATGGGAVIRPINWSYMKKGLTVWLDV 198
Query: 195 PPGMVARM-------------DHSGFPESEVLPQLFALYKEMRDGYATADVTVSLQKVAS 241
P +AR SG P ++ +L +L+++ D YA AD VSL+ +A
Sbjct: 199 PLDALARRIAAVGTASRPLLHQESGDPYAKAYAKLTSLFEQRMDSYANADARVSLEHIAL 258
Query: 242 QLGYDDLDAVTTEDMTLE 259
+ G++D+ +T + +E
Sbjct: 259 KQGHNDVTILTPSTIAIE 276
>gi|297603441|ref|NP_001054037.2| Os04g0640600 [Oryza sativa Japonica Group]
gi|75140480|sp|Q7X7H9.2|SK3_ORYSJ RecName: Full=Shikimate kinase 3, chloroplastic; Short=OsSK3;
Flags: Precursor
gi|38344899|emb|CAE02970.2| OSJNBb0079B02.2 [Oryza sativa Japonica Group]
gi|56805581|dbj|BAD83414.1| shikimate kinase 3 [Oryza sativa Japonica Group]
gi|116310881|emb|CAH67822.1| OSIGBa0138H21-OSIGBa0138E01.13 [Oryza sativa Indica Group]
gi|222629650|gb|EEE61782.1| hypothetical protein OsJ_16353 [Oryza sativa Japonica Group]
gi|255675822|dbj|BAF15951.2| Os04g0640600 [Oryza sativa Japonica Group]
Length = 287
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 111/198 (56%), Gaps = 13/198 (6%)
Query: 75 DPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGG 134
D + +K+KA D+ L ++LVGM + KT +GK LA+ L Y +FDSD LV +A G
Sbjct: 73 DEALVLKQKAEDVVPYLNDRCIYLVGMMGSGKTTVGKILAEVLGYSFFDSDKLVEKAVGI 132
Query: 135 ESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDV 194
S A+ F+ E ++ E+EVL+ LSSM RLVV G GAV N + ++ G ++W+DV
Sbjct: 133 SSVAEIFQLHSEAFFRDNESEVLRDLSSMHRLVVATGGGAVIRPINWSYMKKGSTIWLDV 192
Query: 195 PPGMVARM-------------DHSGFPESEVLPQLFALYKEMRDGYATADVTVSLQKVAS 241
P +AR SG P ++ +L AL+++ D YA AD VSL+ +A
Sbjct: 193 PLDALARRIAAVGTASRPLLHQESGDPYAKAYAKLTALFEQRMDSYANADARVSLEHIAV 252
Query: 242 QLGYDDLDAVTTEDMTLE 259
+ G+ ++ +T + +E
Sbjct: 253 KQGHSNVTTLTPSAIAIE 270
>gi|414585204|tpg|DAA35775.1| TPA: hypothetical protein ZEAMMB73_776202 [Zea mays]
Length = 216
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 111/193 (57%), Gaps = 13/193 (6%)
Query: 80 VKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAK 139
+++KA D+ L G V+LVGM + KT +GK L++ L Y +FDSD LV +A G S A+
Sbjct: 7 LQQKAQDVLPYLDGRCVYLVGMMGSGKTTVGKILSEVLGYSFFDSDKLVEKAVGISSVAE 66
Query: 140 AFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMV 199
F+ E ++ E+EVL LSSM RLVV G GAV N + ++ G+++W+DVP +
Sbjct: 67 IFQLHSETFFRDNESEVLTDLSSMHRLVVATGGGAVIRPINWSYMKKGLTVWLDVPLDAL 126
Query: 200 AR-------------MDHSGFPESEVLPQLFALYKEMRDGYATADVTVSLQKVASQLGYD 246
AR SG P ++ +L +L+++ D YA AD VSL+ +A + G++
Sbjct: 127 ARRIAAVGTASRPLLHQESGDPYAKAYAKLTSLFEQRMDSYANADARVSLEHIALKQGHN 186
Query: 247 DLDAVTTEDMTLE 259
D+ +T + +E
Sbjct: 187 DVTILTPSTIAIE 199
>gi|226495257|ref|NP_001149678.1| shikimate kinase [Zea mays]
gi|194700058|gb|ACF84113.1| unknown [Zea mays]
gi|194700758|gb|ACF84463.1| unknown [Zea mays]
gi|195629356|gb|ACG36319.1| shikimate kinase [Zea mays]
gi|413924549|gb|AFW64481.1| Shikimate kinase [Zea mays]
Length = 303
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 113/198 (57%), Gaps = 13/198 (6%)
Query: 75 DPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGG 134
D + +K+K+ ++ L G ++LVGM + K+ +GK +++ L Y +FDSD LV +A G
Sbjct: 73 DEALLLKRKSEEVLFYLNGRCIYLVGMMGSGKSTVGKIMSEVLGYSFFDSDKLVEQAVGM 132
Query: 135 ESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDV 194
S A+ F+ E ++ E+ VL+ LSSM RLVV G GAV N ++ G+S+W+DV
Sbjct: 133 PSVAQIFKVHSEAFFRDNESSVLRDLSSMRRLVVATGGGAVIRPVNWKYMKKGLSVWLDV 192
Query: 195 PPGMVAR------------MDH-SGFPESEVLPQLFALYKEMRDGYATADVTVSLQKVAS 241
P +AR +D SG P + +L L ++ D YA ADV VSL+++AS
Sbjct: 193 PLDALARRIAKVGTASRPLLDQPSGDPYTMAFSKLSMLAEQRGDAYANADVRVSLEEIAS 252
Query: 242 QLGYDDLDAVTTEDMTLE 259
+ G+ D+ + D+ +E
Sbjct: 253 KQGHGDVSKLMPTDIAIE 270
>gi|449461431|ref|XP_004148445.1| PREDICTED: shikimate kinase, chloroplastic-like [Cucumis sativus]
gi|449503057|ref|XP_004161818.1| PREDICTED: shikimate kinase, chloroplastic-like [Cucumis sativus]
Length = 302
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/240 (34%), Positives = 128/240 (53%), Gaps = 18/240 (7%)
Query: 37 APIRTSLQYSIISRKPRITTRSIADDTTSNTV----TKVAAEDPSFAVKKKAADISTELK 92
AP L+ S S R I+ +++V A+ D + A+++K+ +I + L
Sbjct: 46 APFSFDLRVSRHSNHRRTVALKISCSYNNSSVLESGNHCASVDETLAIQRKSREIESYLN 105
Query: 93 GTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQA 152
G ++LVGM + KT +GK L++AL Y + DSDSLV E G S A+ F+ E +++
Sbjct: 106 GRCIYLVGMMGSGKTTVGKVLSNALGYSFSDSDSLV-EQDMGISVAEVFKVYGEDFFRER 164
Query: 153 ETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVP-PGMVARMDHSGFPE-- 209
ETE L++LS M + V+ G GAV S N + GIS+W+DVP +V R+ G
Sbjct: 165 ETEALRKLSLMRQFVISTGGGAVTRSINWKYMHKGISVWLDVPLEALVKRISAVGTNSRP 224
Query: 210 ----------SEVLPQLFALYKEMRDGYATADVTVSLQKVASQLGYDDLDAVTTEDMTLE 259
S+ L +L L +E + YA A+V VS +K+A++LG D+ VT + +E
Sbjct: 225 LLHHDSNDAYSKTLVRLSTLLEERGEAYANAEVKVSCEKIAAKLGTKDVSNVTPMAIAIE 284
>gi|356525535|ref|XP_003531380.1| PREDICTED: shikimate kinase, chloroplastic-like [Glycine max]
Length = 295
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 133/262 (50%), Gaps = 19/262 (7%)
Query: 17 ITPKGLKFDPPFSLLHSQSYAP--IRTSLQYSIISRKPRITTRSIADDTTSNTVTKV--- 71
+ P+ + PP + S P +R + +++ R+ S + S ++ +
Sbjct: 15 VQPESIGRRPPSTCRLGVSREPQSLRVFVSSTMMRRRTTALEVSCSYGNISASILESGSV 74
Query: 72 -AAEDPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFE 130
A D +K ++ +I L G ++LVGM + KT +GK ++ L Y + DSD+LV E
Sbjct: 75 RAPLDEELILKNRSQEIQPYLNGRCIYLVGMMGSGKTTVGKIMSQVLGYSFCDSDALVEE 134
Query: 131 AAGGESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISL 190
GG S A F++ E ++ ETEVL +LS M +LV+ G GAV N + G+S+
Sbjct: 135 EVGGNSVADIFKQHGETFFRNKETEVLHKLSLMHQLVISTGGGAVTRPINWKYMHKGVSV 194
Query: 191 WIDVPPGMVAR-----------MDH--SGFPESEVLPQLFALYKEMRDGYATADVTVSLQ 237
W+DVP +A+ + H +G P + +L AL++E + YA A+ VSL+
Sbjct: 195 WLDVPVEALAQRIAAVGTNSRPLLHYEAGDPYTRAFMRLSALFEERGEAYANANARVSLK 254
Query: 238 KVASQLGYDDLDAVTTEDMTLE 259
+A +LG D+ ++ D+ +E
Sbjct: 255 NIAIKLGKRDVSELSPTDIAIE 276
>gi|316995679|emb|CBY85385.1| shikimate kinase [Cucumis sativus]
Length = 302
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 82/240 (34%), Positives = 127/240 (52%), Gaps = 18/240 (7%)
Query: 37 APIRTSLQYSIISRKPRITTRSIADDTTSNTV----TKVAAEDPSFAVKKKAADISTELK 92
AP L+ S S R I+ +++V A+ D + A+++K+ +I + L
Sbjct: 46 APFSFDLRVSRHSNHRRTVALKISCSYNNSSVLESGNHCASVDETLAIQRKSREIESYLN 105
Query: 93 GTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQA 152
G ++LVGM + KT +GK L++AL Y + DSDSLV E G S A+ F+ E +++
Sbjct: 106 GRCIYLVGMMGSGKTTVGKVLSNALGYSFSDSDSLV-EQDMGISVAEVFKVYGEDFFRER 164
Query: 153 ETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVP-PGMVARMDHSGFPE-- 209
ETE L +LS M + V+ G GAV S N + GIS+W+DVP +V R+ G
Sbjct: 165 ETEALGKLSLMRQFVISTGGGAVTRSINWKYMHKGISVWLDVPLEALVKRISAVGTNSRP 224
Query: 210 ----------SEVLPQLFALYKEMRDGYATADVTVSLQKVASQLGYDDLDAVTTEDMTLE 259
S+ L +L L +E + YA A+V VS +K+A++LG D+ VT + +E
Sbjct: 225 LLHHDSNDAYSKTLVRLSTLLEERGEAYANAEVKVSCEKIAAKLGTKDVSNVTPMAIAIE 284
>gi|380505030|gb|AFD62803.1| shikimate kinase, partial [Ipomoea purpurea]
Length = 298
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 118/226 (52%), Gaps = 17/226 (7%)
Query: 51 KPRITTRSIADDTTSNTVTKVAAEDPSF----AVKKKAADISTELKGTSVFLVGMNNAIK 106
+P + T S + + ++ + PS +K K+ +I L G ++LVGM + K
Sbjct: 59 RPCLLTASCSSQNSQASIMESENSLPSLDEIQVLKSKSEEIEPCLSGRCIYLVGMMGSGK 118
Query: 107 THLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEVLKQLSSMGRL 166
T +G+ +A+AL Y +FD D+L+ +A GG S A+ F+ E ++ ETEVL++LS M +
Sbjct: 119 TTVGRIIAEALGYAFFDCDTLIEQAVGGTSVAEIFKLHGEGFFRDNETEVLRKLSLMREV 178
Query: 167 VVCAGNGAVQSSANLALLRHGISLWIDVPPGMVARM-------------DHSGFPESEVL 213
VV G GAV N + GIS+W+DVP +AR + SG ++ L
Sbjct: 179 VVSTGGGAVVRPINWRYMHKGISVWLDVPVDALARRISAVGTHSRPLLHNESGDIYAKTL 238
Query: 214 PQLFALYKEMRDGYATADVTVSLQKVASQLGYDDLDAVTTEDMTLE 259
+L L E D YA + V L+ +A++ G D+ +T ++ +E
Sbjct: 239 KRLSTLLDERGDAYANSKARVCLENIAAKSGCIDVCTITPTEIAIE 284
>gi|76782196|gb|ABA54868.1| putative shikimate kinase [Fagus sylvatica]
Length = 302
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 110/198 (55%), Gaps = 13/198 (6%)
Query: 75 DPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGG 134
D + +K K+ +I L G ++LVGM + KT +GK L+ L Y +FDSD+LV +
Sbjct: 87 DDALILKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKVLSQVLSYAFFDSDTLVEQDVDA 146
Query: 135 ESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDV 194
S A+ F E ++ ETEVL++LS M RLVV G GAV N ++ GIS+W+DV
Sbjct: 147 NSVAEIFNLYGEGFFRDKETEVLRKLSLMHRLVVSTGGGAVVRPINWKYMQKGISVWLDV 206
Query: 195 PPGMVAR------------MDH-SGFPESEVLPQLFALYKEMRDGYATADVTVSLQKVAS 241
P +AR + H SG ++ +L +L +E + YA A+ VSL+ VA+
Sbjct: 207 PLEALARRIAAVGTGSRPLLHHDSGDAYTKTFMRLTSLMEERSEAYANANARVSLEDVAA 266
Query: 242 QLGYDDLDAVTTEDMTLE 259
+LG+ D+ +T + +E
Sbjct: 267 KLGHRDVSNLTPTAIAIE 284
>gi|297821397|ref|XP_002878581.1| hypothetical protein ARALYDRAFT_320039 [Arabidopsis lyrata subsp.
lyrata]
gi|297324420|gb|EFH54840.1| hypothetical protein ARALYDRAFT_320039 [Arabidopsis lyrata subsp.
lyrata]
Length = 305
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 119/230 (51%), Gaps = 20/230 (8%)
Query: 50 RKPRITTRSIADDTTSNTVTKVAAEDP-------SFAVKKKAADISTELKGTSVFLVGMN 102
RK +++ + D S+ + + + P +++KA ++ L G S++LVGM
Sbjct: 54 RKRSVSSEVLCSDNNSSALLEAGSVYPFDEDLILKATLQRKAEEVKPFLNGRSMYLVGMM 113
Query: 103 NAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEVLKQLSS 162
+ KT +GK ++ L Y +FD DSL+ +A G S A+ F E ++ ET+ LK+LSS
Sbjct: 114 GSGKTTVGKLMSKVLGYSFFDCDSLIEQAMNGTSVAEIFVHHGENFFRGKETDALKKLSS 173
Query: 163 MGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVARM-------------DHSGFPE 209
M ++VV G GAV N + GIS+W+DVP +A D SG
Sbjct: 174 MYQVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEALAHRIAAVGTGSRPLLHDESGDAY 233
Query: 210 SEVLPQLFALYKEMRDGYATADVTVSLQKVASQLGYDDLDAVTTEDMTLE 259
S +L ++ E + YA A+ VSL+ +A++ GY D+ +T ++ +E
Sbjct: 234 SVAFKRLSTIWDERGEAYANANARVSLENIAAKRGYKDVSDLTPTEIAIE 283
>gi|4417286|gb|AAD20411.1| putative shikimate kinase precursor [Arabidopsis thaliana]
Length = 292
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 106/194 (54%), Gaps = 13/194 (6%)
Query: 80 VKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAK 139
+K+KA ++ L G S++LVGM + KT +GK ++ L Y +FD D+L+ +A G S A+
Sbjct: 89 LKRKAEEVKPYLNGRSMYLVGMMGSGKTTVGKLMSKVLGYTFFDCDTLIEQAMNGTSVAE 148
Query: 140 AFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMV 199
F E ++ ET+ LK+LSS ++VV G GAV N + GIS+W+DVP +
Sbjct: 149 IFVHHGENFFRGKETDALKKLSSRYQVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEAL 208
Query: 200 ARM-------------DHSGFPESEVLPQLFALYKEMRDGYATADVTVSLQKVASQLGYD 246
A D SG S +L A++ E + Y A+ VSL+ +A++ GY
Sbjct: 209 AHRIAAVGTDSRPLLHDESGDAYSVAFKRLSAIWDERGEAYTNANARVSLENIAAKRGYK 268
Query: 247 DLDAVTTEDMTLEV 260
++ +T ++ +EV
Sbjct: 269 NVSDLTPTEIAIEV 282
>gi|145329216|ref|NP_001077937.1| Shikimate kinase [Arabidopsis thaliana]
gi|330252149|gb|AEC07243.1| Shikimate kinase [Arabidopsis thaliana]
Length = 304
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 128/253 (50%), Gaps = 20/253 (7%)
Query: 22 LKFDPPFSLLHSQSYAPIRTSLQYSIISRKPRITTRSIADDTTSNTVTKVAAEDP--SFA 79
+K D F L P R + Q +S P + S +D+ +S + + + P
Sbjct: 35 VKVDRRFRGLSLARLQPERRNDQRRAVS--PAV---SCSDNNSSGALLETGSVYPFDEDI 89
Query: 80 VKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAK 139
+K+KA ++ L G S++LVGM + KT +GK ++ L Y +FD D+L+ +A G S A+
Sbjct: 90 LKRKAEEVKPYLNGRSMYLVGMMGSGKTTVGKLMSKVLGYTFFDCDTLIEQAMNGTSVAE 149
Query: 140 AFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMV 199
F E ++ ET+ LK+LSS ++VV G GAV N + GIS+W+DVP +
Sbjct: 150 IFVHHGENFFRGKETDALKKLSSRYQVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEAL 209
Query: 200 ARM-------------DHSGFPESEVLPQLFALYKEMRDGYATADVTVSLQKVASQLGYD 246
A D SG S +L A++ E + Y A+ VSL+ +A++ GY
Sbjct: 210 AHRIAAVGTDSRPLLHDESGDAYSVAFKRLSAIWDERGEAYTNANARVSLENIAAKRGYK 269
Query: 247 DLDAVTTEDMTLE 259
++ +T ++ +E
Sbjct: 270 NVSDLTPTEIAIE 282
>gi|189303601|gb|ACD85800.1| At2g21940 [Arabidopsis thaliana]
Length = 303
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 105/193 (54%), Gaps = 13/193 (6%)
Query: 80 VKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAK 139
+K+KA ++ L G S++LVGM + KT +GK ++ L Y +FD D+L+ +A G S A+
Sbjct: 89 LKRKAEEVKPYLNGRSMYLVGMMGSGKTTVGKLMSKVLGYTFFDCDTLIEQAMNGTSVAE 148
Query: 140 AFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMV 199
F E ++ ET+ LK+LSS ++VV G GAV N + GIS+W+DVP +
Sbjct: 149 IFVHHGENFFRGKETDALKKLSSRYQVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEAL 208
Query: 200 ARM-------------DHSGFPESEVLPQLFALYKEMRDGYATADVTVSLQKVASQLGYD 246
A D SG S +L A++ E + Y A+ VSL+ +A++ GY
Sbjct: 209 AHRIAAVGTDSRPLLHDESGDAYSVAFKRLSAIWDERGEAYTNANARVSLENIAAKRGYK 268
Query: 247 DLDAVTTEDMTLE 259
D+ +T ++ +E
Sbjct: 269 DVSDLTPTEIAIE 281
>gi|255572361|ref|XP_002527119.1| Shikimate kinase, chloroplast precursor, putative [Ricinus
communis]
gi|223533542|gb|EEF35282.1| Shikimate kinase, chloroplast precursor, putative [Ricinus
communis]
Length = 282
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 107/190 (56%), Gaps = 13/190 (6%)
Query: 75 DPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGG 134
D + +K K +++ LKG VFLVGM + KT +GK L++AL Y + DSD V + AGG
Sbjct: 84 DGYWLLKTKGKKVASGLKGCCVFLVGMMGSGKTTVGKILSEALGYTFVDSDEYVEQTAGG 143
Query: 135 ESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDV 194
S + F++ E ++ E+E L++LS + R VV G G+V N +R GI++++DV
Sbjct: 144 NSVSHIFQQYGEDYFRDIESEALQKLSIIPRQVVATGGGSVVRPINWKYMRQGITVFLDV 203
Query: 195 PPGMVAR-----------MDH--SGFPESEVLPQLFALYKEMRDGYATADVTVSLQKVAS 241
P +AR + H SG P ++ LF L K+ + Y+ ADV VSL +A
Sbjct: 204 PLDALARRIAAVGTDSRPLLHLDSGDPYTKAFMGLFTLSKKRVEAYSDADVIVSLLDLAD 263
Query: 242 QLGYDDLDAV 251
LG++D+ V
Sbjct: 264 DLGFEDVSDV 273
>gi|449521902|ref|XP_004167968.1| PREDICTED: shikimate kinase, chloroplastic-like [Cucumis sativus]
Length = 300
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 104/198 (52%), Gaps = 13/198 (6%)
Query: 75 DPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGG 134
D +K K+ ++ L G ++LVGM + KT +GK LA L Y + DSD+LV + GG
Sbjct: 85 DKDLLLKNKSQEVQPHLNGRCIYLVGMMGSGKTTIGKILAKELGYTFSDSDTLVEQEVGG 144
Query: 135 ESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDV 194
S A F+ E ++ ETEVL++LS M V+ G G V N +R+GIS+W+DV
Sbjct: 145 TSVADIFKLHGEVFFRDKETEVLRKLSLMHGFVISTGGGIVVRPINWKYMRNGISIWLDV 204
Query: 195 PPGMVAR------------MDH-SGFPESEVLPQLFALYKEMRDGYATADVTVSLQKVAS 241
P +A+ + H SG ++ +L L +E D YA A+ V L +A
Sbjct: 205 PLEALAKRIAAVGTDSRPLLHHESGNAYTKAFRRLSVLLEERGDAYANANAKVCLGSLAD 264
Query: 242 QLGYDDLDAVTTEDMTLE 259
+LG D+ +T D+ +E
Sbjct: 265 KLGLSDVCNLTPADIAVE 282
>gi|449448562|ref|XP_004142035.1| PREDICTED: shikimate kinase, chloroplastic-like [Cucumis sativus]
Length = 229
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 104/198 (52%), Gaps = 13/198 (6%)
Query: 75 DPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGG 134
D +K K+ ++ L G ++LVGM + KT +GK LA L Y + DSD+LV + GG
Sbjct: 14 DKDLLLKNKSQEVQPHLNGQCIYLVGMMGSGKTTIGKILAKELGYTFSDSDTLVEQEVGG 73
Query: 135 ESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDV 194
S A F+ E ++ ETEVL++LS M V+ G G V N +R+GIS+W+DV
Sbjct: 74 TSVADIFKLHGEVFFRDKETEVLRKLSLMHGFVISTGGGIVVRPINWKYMRNGISIWLDV 133
Query: 195 PPGMVAR------------MDH-SGFPESEVLPQLFALYKEMRDGYATADVTVSLQKVAS 241
P +A+ + H SG ++ +L L +E D YA A+ V L +A
Sbjct: 134 PLEALAKRIAAVGTDSRPLLHHESGNAYTKAFRRLSVLLEERGDAYANANAKVCLGSLAD 193
Query: 242 QLGYDDLDAVTTEDMTLE 259
+LG D+ +T D+ +E
Sbjct: 194 KLGLSDVCNLTPADIAVE 211
>gi|39104605|dbj|BAC43483.2| putative shikimate kinase precursor [Arabidopsis thaliana]
Length = 303
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 105/193 (54%), Gaps = 13/193 (6%)
Query: 80 VKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAK 139
+K+KA ++ L G S++LVGM + KT +GK ++ L Y +FD D+L+ +A G S A+
Sbjct: 89 LKRKAEEVKPYLNGRSMYLVGMMGSGKTTVGKLMSKVLGYTFFDCDTLIEQAMNGTSVAE 148
Query: 140 AFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMV 199
F E ++ ET+ LK+LSS ++VV G GAV N + GIS+W+DVP +
Sbjct: 149 IFVHHGENFFRGKETDALKKLSSRYQVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEAL 208
Query: 200 ARM-------------DHSGFPESEVLPQLFALYKEMRDGYATADVTVSLQKVASQLGYD 246
A D SG S +L A++ E + Y A+ VSL+ +A++ GY
Sbjct: 209 AHRIAAVGTDSRPLLHDESGNAYSVAFKRLSAIWDERGEAYTNANARVSLENIAAKRGYK 268
Query: 247 DLDAVTTEDMTLE 259
++ +T ++ +E
Sbjct: 269 NVSDLTPTEIAIE 281
>gi|30681570|ref|NP_179785.2| Shikimate kinase [Arabidopsis thaliana]
gi|145329577|ref|NP_001077938.1| Shikimate kinase [Arabidopsis thaliana]
gi|145362131|ref|NP_973507.2| Shikimate kinase [Arabidopsis thaliana]
gi|209572588|sp|Q9SJ05.2|SK1_ARATH RecName: Full=Shikimate kinase 1, chloroplastic; Short=AtSK1;
Flags: Precursor
gi|330252146|gb|AEC07240.1| Shikimate kinase [Arabidopsis thaliana]
gi|330252147|gb|AEC07241.1| Shikimate kinase [Arabidopsis thaliana]
gi|330252150|gb|AEC07244.1| Shikimate kinase [Arabidopsis thaliana]
Length = 303
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 105/193 (54%), Gaps = 13/193 (6%)
Query: 80 VKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAK 139
+K+KA ++ L G S++LVGM + KT +GK ++ L Y +FD D+L+ +A G S A+
Sbjct: 89 LKRKAEEVKPYLNGRSMYLVGMMGSGKTTVGKLMSKVLGYTFFDCDTLIEQAMNGTSVAE 148
Query: 140 AFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMV 199
F E ++ ET+ LK+LSS ++VV G GAV N + GIS+W+DVP +
Sbjct: 149 IFVHHGENFFRGKETDALKKLSSRYQVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEAL 208
Query: 200 ARM-------------DHSGFPESEVLPQLFALYKEMRDGYATADVTVSLQKVASQLGYD 246
A D SG S +L A++ E + Y A+ VSL+ +A++ GY
Sbjct: 209 AHRIAAVGTDSRPLLHDESGDAYSVAFKRLSAIWDERGEAYTNANARVSLENIAAKRGYK 268
Query: 247 DLDAVTTEDMTLE 259
++ +T ++ +E
Sbjct: 269 NVSDLTPTEIAIE 281
>gi|224083807|ref|XP_002307130.1| shikimate kinase [Populus trichocarpa]
gi|222856579|gb|EEE94126.1| shikimate kinase [Populus trichocarpa]
Length = 286
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 129/259 (49%), Gaps = 27/259 (10%)
Query: 22 LKFDPPFSLLHSQSYAPIRTSLQYSIISRKPRITTRSIADDTTSNTVTKVAAE------- 74
LK + S + P+R + R+ + ++ ++ V+ + +E
Sbjct: 35 LKEQKRLQVFVSAQFRPVRDE-------NRHRLASFEVSRSYNNSRVSTLESESLQDLLD 87
Query: 75 DPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGG 134
D + +K K+ +I L G ++LVGM + KT +GK L+ A+ Y + DSD+LV + G
Sbjct: 88 DEALILKNKSQEIEPYLNGRCIYLVGMMGSGKTTVGKILSQAIHYSFCDSDTLVEKDVGV 147
Query: 135 ESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDV 194
S A+ F+ E ++ ETE L++LS R VV G GAV N +R GIS+W+DV
Sbjct: 148 TSVAEIFQIYGEDFFRDKETEALEKLSLEHRYVVSTGGGAVIQDENWTYMRKGISVWLDV 207
Query: 195 PPGMVAR------------MDHS-GFPESEVLPQLFALYKEMRDGYATADVTVSLQKVAS 241
P +A+ +D G ++ +L AL+++ Y A+ VSL+ +A+
Sbjct: 208 PLEELAQRIAAVGTKTRPLLDREPGDAYTKAFRRLSALFEQRYKAYENANARVSLENIAA 267
Query: 242 QLGYDDLDAVTTEDMTLEV 260
+LGY D+ +T + +EV
Sbjct: 268 KLGYKDVSNITPPMIAIEV 286
>gi|356507492|ref|XP_003522498.1| PREDICTED: LOW QUALITY PROTEIN: shikimate kinase,
chloroplastic-like [Glycine max]
Length = 311
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 103/190 (54%), Gaps = 17/190 (8%)
Query: 75 DPSFAVKKKAADISTELKGTSVFLV----GMNNAIKTHLGKFLADALRYYYFDSDSLVFE 130
D +K K+ +I L G ++LV GM + KT +GK L+ L Y +FDSD+LV E
Sbjct: 95 DEMLILKSKSQEIEPYLNGRCIYLVDQSLGMMGSGKTTVGKILSQVLSYLFFDSDALVEE 154
Query: 131 AAGGESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISL 190
G + A F+ + E ++ ETEVL++LS M R V+ G GAV N ++ GIS+
Sbjct: 155 EVDGTAVADIFKHNGEPFFRNKETEVLRKLSMMHRYVISTGGGAVVRPINWKYMQQGISV 214
Query: 191 WIDVP-PGMVARMDHSG--------FPESEVLPQLF----ALYKEMRDGYATADVTVSLQ 237
W+DVP + R+ G + E + + F AL+KE + YA A+V VSL+
Sbjct: 215 WLDVPVEALAQRITAVGTDSRPLLHYEEGDAYTKTFMRLSALFKERSEAYANANVKVSLE 274
Query: 238 KVASQLGYDD 247
+A++LG D
Sbjct: 275 NMAAKLGSRD 284
>gi|222136867|gb|ACM45083.1| shikimate kinase [Vitis vinifera]
Length = 300
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 108/198 (54%), Gaps = 13/198 (6%)
Query: 75 DPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGG 134
D + +K K+ +I + G V+LVGM + KT +GK L++ L Y + DSD+LV A G
Sbjct: 84 DEALILKNKSQEILPYIDGRCVYLVGMMGSGKTTIGKILSEVLGYSFCDSDTLVELAVKG 143
Query: 135 ESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDV 194
S A+ F E ++ E+E L++LS +VV G GAV N + GIS+W+DV
Sbjct: 144 TSVAEIFNLYGEGFFRNKESETLQKLSLTHHMVVSTGGGAVIRPINWKYMAKGISVWLDV 203
Query: 195 PPGMVAR------------MDH-SGFPESEVLPQLFALYKEMRDGYATADVTVSLQKVAS 241
P +AR + H SG + L +L L+KE D YA A+ VSL+++A+
Sbjct: 204 PLEALARRISAVGTNSRPLLHHDSGDAYNRTLTRLSNLWKERGDAYANANARVSLEEIAA 263
Query: 242 QLGYDDLDAVTTEDMTLE 259
+LG+ D+ +T + +E
Sbjct: 264 KLGHRDVTNLTPTVIAIE 281
>gi|356509036|ref|XP_003523258.1| PREDICTED: shikimate kinase, chloroplastic-like [Glycine max]
Length = 299
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 122/231 (52%), Gaps = 21/231 (9%)
Query: 39 IRTSLQYSIISRKPRITTRSIADDTTSNTVTKVAAEDPSF--------AVKKKAADISTE 90
+ + LQ + S R T S+ + N + A E SF +K K+ +I
Sbjct: 43 VSSKLQSAKPSANIRRRTASLVVACSHNNIPASALEYGSFHSSVEEKLILKIKSQEIEPY 102
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
L G ++LVGM + KT +G+ L++AL Y ++DSD+LV + GG S F+ E ++
Sbjct: 103 LSGRCIYLVGMMASGKTTVGRILSEALSYSFYDSDALVVKEVGGISVTDIFKHYGEPFFR 162
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVAR--------- 201
ETEVL+++S M R ++ G GAV N ++ GIS+W+DVP ++ +
Sbjct: 163 NKETEVLQKVSIMHRHLISTGGGAVVRPINWKYMQQGISVWLDVPVEVLTQRITAEGTDS 222
Query: 202 --MDH--SGFPESEVLPQLFALYKEMRDGYATADVTVSLQKVASQLGYDDL 248
+ H G ++ + L +L++E + YA A+V VSL+ +A++LG D+
Sbjct: 223 RPLLHYEGGDAYTKTITHLSSLFEERSEAYANANVKVSLENMAAKLGRRDV 273
>gi|225438559|ref|XP_002279932.1| PREDICTED: shikimate kinase, chloroplastic [Vitis vinifera]
gi|147772563|emb|CAN67344.1| hypothetical protein VITISV_038221 [Vitis vinifera]
gi|296082504|emb|CBI21509.3| unnamed protein product [Vitis vinifera]
Length = 301
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 108/198 (54%), Gaps = 13/198 (6%)
Query: 75 DPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGG 134
D + +K K+ +I + G V+LVGM + KT +GK L++ L Y + DSD+LV A G
Sbjct: 84 DEALILKNKSQEILPYIDGRCVYLVGMMGSGKTTIGKILSEVLGYSFCDSDTLVELAVKG 143
Query: 135 ESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDV 194
S A+ F E ++ E+E L++LS +VV G GAV N + GIS+W+DV
Sbjct: 144 TSVAEIFNLYGEGFFRNKESETLQKLSLTHHMVVSTGGGAVIRPINWKYMAKGISVWLDV 203
Query: 195 PPGMVAR------------MDH-SGFPESEVLPQLFALYKEMRDGYATADVTVSLQKVAS 241
P +AR + H SG + L +L L+KE D YA A+ VSL+++A+
Sbjct: 204 PLEALARRISAVGTNSRPLLHHDSGDAYNRTLTRLSNLWKERGDAYANANARVSLEEIAA 263
Query: 242 QLGYDDLDAVTTEDMTLE 259
+LG+ D+ +T + +E
Sbjct: 264 KLGHRDVTNLTPTVIAIE 281
>gi|388514859|gb|AFK45491.1| unknown [Lotus japonicus]
Length = 299
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 107/198 (54%), Gaps = 13/198 (6%)
Query: 75 DPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGG 134
D +K K+ +I L G ++LVGM + KT +GK L++ L Y +FDSD+L+ E
Sbjct: 87 DEEMILKSKSQEIEPYLNGRCIYLVGMMGSGKTTVGKILSEVLSYSFFDSDALIEEEVDK 146
Query: 135 ESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDV 194
S A F+ E ++ ETE+LK+LS M R V+ G GAV N + GIS+W+DV
Sbjct: 147 TSVADIFKNYGEAFFRNKETEILKKLSMMRRDVISTGGGAVVKPTNWKYMHKGISVWLDV 206
Query: 195 PPGMVAR-----------MDH--SGFPESEVLPQLFALYKEMRDGYATADVTVSLQKVAS 241
P +AR + H +G ++ +L +L++E + +A A+ VSL+ +A+
Sbjct: 207 PVEALARRITKVGTNSRPLLHYEAGDAYTKTFMRLSSLFEERSEAHANANARVSLENIAA 266
Query: 242 QLGYDDLDAVTTEDMTLE 259
+L D ++ + + +E
Sbjct: 267 KLDQKDASHLSPKTIAIE 284
>gi|218195681|gb|EEC78108.1| hypothetical protein OsI_17614 [Oryza sativa Indica Group]
Length = 253
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 97/173 (56%), Gaps = 13/173 (7%)
Query: 100 GMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEVLKQ 159
GM + KT +GK LA+ L Y +FDSD LV +A G S A+ F+ E ++ E+EVL+
Sbjct: 64 GMMGSGKTTVGKILAEVLGYSFFDSDKLVEKAVGISSVAEIFQLHSEAFFRDNESEVLRD 123
Query: 160 LSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVARM-------------DHSG 206
LSSM RLVV G GAV N + ++ G ++W+DVP +AR SG
Sbjct: 124 LSSMHRLVVATGGGAVIRPINWSYMKKGSTIWLDVPLDALARRIAAVGTASRPLLHQESG 183
Query: 207 FPESEVLPQLFALYKEMRDGYATADVTVSLQKVASQLGYDDLDAVTTEDMTLE 259
P ++ +L AL+++ D YA AD VSL+ +A + G+ ++ +T + +E
Sbjct: 184 DPYAKAYAKLTALFEQRMDSYANADARVSLEHIAVKQGHSNVTTLTPSAIAIE 236
>gi|255646624|gb|ACU23786.1| unknown [Glycine max]
Length = 299
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 122/231 (52%), Gaps = 21/231 (9%)
Query: 39 IRTSLQYSIISRKPRITTRSIADDTTSNTVTKVAAEDPSF--------AVKKKAADISTE 90
+ + LQ + S R T S+ + N + A E SF +K K+ +I
Sbjct: 43 VSSKLQSAKPSANIRRRTASLVVACSHNNIPASALEYGSFHSSVEEKLILKIKSQEIEPY 102
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
L G ++LVGM + KT +G+ L++AL Y ++DSD+LV + GG S F+ E ++
Sbjct: 103 LSGRCIYLVGMMASGKTTVGRILSEALSYSFYDSDALVVKEVGGISVTDIFKHYGEPFFR 162
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVAR--------- 201
ETEVL+++S M R ++ G GAV + ++ GIS+W+DVP ++ +
Sbjct: 163 NKETEVLQKVSIMHRHLISTGGGAVVRPIDWKYMQQGISVWLDVPVEVLTQRITAEGTDS 222
Query: 202 --MDH--SGFPESEVLPQLFALYKEMRDGYATADVTVSLQKVASQLGYDDL 248
+ H G ++ + L +L++E + YA A+V VSL+ +A++LG D+
Sbjct: 223 RPLLHYEGGDAYTKTITHLSSLFEERSEAYANANVKVSLENMAAKLGRRDV 273
>gi|350538979|ref|NP_001234112.1| shikimate kinase, chloroplastic [Solanum lycopersicum]
gi|114200|sp|Q00497.1|AROK_SOLLC RecName: Full=Shikimate kinase, chloroplastic; Flags: Precursor
gi|19349|emb|CAA45121.1| shikimate kinase precursor [Solanum lycopersicum]
Length = 300
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 104/202 (51%), Gaps = 14/202 (6%)
Query: 72 AAEDPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEA 131
A+ D +K KA ++ L G V+LVGM KT +G+ LA+ L Y +FD D L+ +A
Sbjct: 83 ASIDEIETLKNKAEEVEEYLDGRCVYLVGMMGCGKTTVGRILAETLGYSFFDCDRLIEQA 142
Query: 132 AGGESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLW 191
GG + A+ F E ++ ETEVL +LS M RLVV G GAV N + GIS+W
Sbjct: 143 VGGITVAEIFELRGESFFRDNETEVLHKLSLMHRLVVSTGGGAVVRPINWRHMHKGISVW 202
Query: 192 IDVPPGMVARM-------------DHSGFPESEVLPQLFALYKEMRDGYATADVTVSLQK 238
+DVP +A+ + SG L +L L + + YA A VSL+
Sbjct: 203 LDVPLEALAKRITTEGTKSRPLLHEESGDVYDTTLKRLTTLMETRGENYANASARVSLEN 262
Query: 239 VASQLGYDDLDAVTTEDMTLEV 260
+A + D+ +T ++TLEV
Sbjct: 263 IALK-REKDVCHITPAEITLEV 283
>gi|388510434|gb|AFK43283.1| unknown [Lotus japonicus]
Length = 299
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 118/225 (52%), Gaps = 20/225 (8%)
Query: 43 LQYSIISRKPRITTRSIA---DDTTSNTV---TKVAAEDPSFAVKKKAADISTELKGTSV 96
L S I R+ RI + +A D+ ++T+ ++ A D ++ ++ +I L G +
Sbjct: 46 LHSSKIHRR-RIASMEVACSYDNLPASTLESGSRRAPLDDELILENRSQEIQPYLNGRCI 104
Query: 97 FLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEV 156
+LVGM + KT +GK ++ L Y + DSD+LV E GG S A F E ++ ETE
Sbjct: 105 YLVGMMGSGKTTVGKIMSKVLGYEFCDSDALVEEEVGGNSVADIFNLYGESFFRDKETEA 164
Query: 157 LKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVAR-----------MDH- 204
L +LS M R +V G GAV N + GIS+W+DVP +A+ + H
Sbjct: 165 LHKLSMMHRHIVSTGGGAVMRPINWKYMHKGISVWLDVPVEALAQRIAAVGTNSRPLLHY 224
Query: 205 -SGFPESEVLPQLFALYKEMRDGYATADVTVSLQKVASQLGYDDL 248
+G + L +L AL++E + YA A VSL+K+A++ G D+
Sbjct: 225 EAGDAYTRALMRLSALFEERGEAYANASARVSLEKIATKRGQRDV 269
>gi|224096310|ref|XP_002310602.1| shikimate kinase [Populus trichocarpa]
gi|222853505|gb|EEE91052.1| shikimate kinase [Populus trichocarpa]
Length = 294
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 103/198 (52%), Gaps = 13/198 (6%)
Query: 75 DPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGG 134
+ + +K K+ +I L G ++LVGM + KT +GK L+ ++RY + D D LV + G
Sbjct: 88 EEALILKNKSQEIEPYLNGRCIYLVGMMGSGKTTVGKILSRSIRYSFCDCDKLVEQDVGV 147
Query: 135 ESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDV 194
S A+ F E ++ ETE L++LS R VV G GAV N +R GIS+W+DV
Sbjct: 148 PSVAEIFEIYGEDFFRDKETEALEKLSIEHRFVVSTGGGAVIRDENWIYMRKGISVWLDV 207
Query: 195 PPGMVARM-------------DHSGFPESEVLPQLFALYKEMRDGYATADVTVSLQKVAS 241
P +A+ + SG + +L L+++ Y A VSL+ +A+
Sbjct: 208 PLEELAQRIAAVGTKSRPLLDNESGDAYNTAFRRLSTLFEKRHKAYENAKARVSLENIAA 267
Query: 242 QLGYDDLDAVTTEDMTLE 259
+LGY D+ ++T + +E
Sbjct: 268 KLGYKDVSSITPAMIAIE 285
>gi|374256057|gb|AEZ00890.1| putative shikimate kinase 1 protein, partial [Elaeis guineensis]
Length = 164
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 81/127 (63%)
Query: 75 DPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGG 134
D + +K+KA DI++ L G ++LVGM + KT +GK L++ L Y + DSD LV +A G
Sbjct: 1 DEALILKRKAEDITSSLNGHCIYLVGMMGSGKTTVGKILSEVLGYSFIDSDKLVEQAVGV 60
Query: 135 ESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDV 194
S A+ F+E E ++ E++VL+ LS+M RLVV G GAV N ++ G+++W+DV
Sbjct: 61 PSVAQIFKEYSEAFFRDNESKVLRDLSTMHRLVVATGGGAVIRPVNWKYMKQGMTVWLDV 120
Query: 195 PPGMVAR 201
P +AR
Sbjct: 121 PLEALAR 127
>gi|413924548|gb|AFW64480.1| hypothetical protein ZEAMMB73_201621 [Zea mays]
Length = 205
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 97/172 (56%), Gaps = 13/172 (7%)
Query: 101 MNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEVLKQL 160
M + K+ +GK +++ L Y +FDSD LV +A G S A+ F+ E ++ E+ VL+ L
Sbjct: 1 MMGSGKSTVGKIMSEVLGYSFFDSDKLVEQAVGMPSVAQIFKVHSEAFFRDNESSVLRDL 60
Query: 161 SSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVAR------------MDH-SGF 207
SSM RLVV G GAV N ++ G+S+W+DVP +AR +D SG
Sbjct: 61 SSMRRLVVATGGGAVIRPVNWKYMKKGLSVWLDVPLDALARRIAKVGTASRPLLDQPSGD 120
Query: 208 PESEVLPQLFALYKEMRDGYATADVTVSLQKVASQLGYDDLDAVTTEDMTLE 259
P + +L L ++ D YA ADV VSL+++AS+ G+ D+ + D+ +E
Sbjct: 121 PYTMAFSKLSMLAEQRGDAYANADVRVSLEEIASKQGHGDVSKLMPTDIAIE 172
>gi|297797940|ref|XP_002866854.1| shikimate kinase family protein [Arabidopsis lyrata subsp. lyrata]
gi|297312690|gb|EFH43113.1| shikimate kinase family protein [Arabidopsis lyrata subsp. lyrata]
Length = 299
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 103/195 (52%), Gaps = 15/195 (7%)
Query: 80 VKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAK 139
++KKA ++ L G S++LVGM + KT +GK +A AL Y +FD D+L+ +A G S A+
Sbjct: 84 LQKKAEEVKPYLNGRSMYLVGMMGSGKTTVGKIMARALGYTFFDCDTLIEQAMNGTSVAE 143
Query: 140 AFRESDEKGYQQAETEVLKQLSSM-GRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGM 198
F E +++ ETE LK+LS M ++VV G GAV N + GIS+W+DVP
Sbjct: 144 IFEHFGESVFREKETEALKKLSLMYNQVVVSTGGGAVIRPINWKYMHKGISIWLDVPLKA 203
Query: 199 VARM--------------DHSGFPESEVLPQLFALYKEMRDGYATADVTVSLQKVASQLG 244
+A D SG + L +L ++ + Y A VSL+ + +LG
Sbjct: 204 LAHRIAAVGTGSRPLLHDDESGDTYTAALNRLSTIWDARGEAYTNASARVSLESMTLKLG 263
Query: 245 YDDLDAVTTEDMTLE 259
Y + +T ++ +E
Sbjct: 264 YRSVSDLTPTEIAME 278
>gi|302773918|ref|XP_002970376.1| hypothetical protein SELMODRAFT_411357 [Selaginella moellendorffii]
gi|300161892|gb|EFJ28506.1| hypothetical protein SELMODRAFT_411357 [Selaginella moellendorffii]
Length = 237
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 111/203 (54%), Gaps = 22/203 (10%)
Query: 62 DTTSNTVTKVAAEDPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYY 121
D + + KV D + A+K + +++ +L GT +FLVGM K+ + K +++AL Y +
Sbjct: 17 DVAAPVIRKVH-NDSALAIKGR--EVAGDLSGTCLFLVGMMGCGKSTVAKDISEALSYEF 73
Query: 122 FDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANL 181
DSD LV E A G + AK F +S E+ ++ AE+E L QLS +VV G GAV N
Sbjct: 74 QDSDKLV-EKAVGATVAKIFSDSSEEKFRAAESEALNQLSETSNVVVATGGGAVVRDENW 132
Query: 182 ALLRHGISLWIDVP----------------PGMVARM-DHS-GFPESEVLPQLFALYKEM 223
L+ GI++++DVP P +VA D+S G + L +L +Y+E
Sbjct: 133 RYLKQGITIYLDVPVEALAQRVVAAGLEKRPLLVASGPDNSPGNAHEQALARLSKVYEER 192
Query: 224 RDGYATADVTVSLQKVASQLGYD 246
Y AD+ +S+ K+AS+LG D
Sbjct: 193 NKAYERADLKISVAKIASELGRD 215
>gi|30692396|ref|NP_195664.2| shikimate kinase 2 [Arabidopsis thaliana]
gi|42573237|ref|NP_974715.1| shikimate kinase 2 [Arabidopsis thaliana]
gi|75151384|sp|Q8GY88.1|SK2_ARATH RecName: Full=Shikimate kinase 2, chloroplastic; Short=AtSK2;
Flags: Precursor
gi|26450651|dbj|BAC42436.1| putative shikimate kinase [Arabidopsis thaliana]
gi|28950863|gb|AAO63355.1| At4g39540 [Arabidopsis thaliana]
gi|332661683|gb|AEE87083.1| shikimate kinase 2 [Arabidopsis thaliana]
gi|332661684|gb|AEE87084.1| shikimate kinase 2 [Arabidopsis thaliana]
Length = 300
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 103/195 (52%), Gaps = 15/195 (7%)
Query: 80 VKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAK 139
+KKKA ++ L G S++LVGM + KT +GK +A +L Y +FD D+L+ +A G S A+
Sbjct: 85 LKKKAEEVKPYLNGRSMYLVGMMGSGKTTVGKIMARSLGYTFFDCDTLIEQAMKGTSVAE 144
Query: 140 AFRESDEKGYQQAETEVLKQLSSM-GRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGM 198
F E +++ ETE LK+LS M ++VV G GAV N + GIS+W+DVP
Sbjct: 145 IFEHFGESVFREKETEALKKLSLMYHQVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEA 204
Query: 199 VARM--------------DHSGFPESEVLPQLFALYKEMRDGYATADVTVSLQKVASQLG 244
+A D SG + L +L ++ + Y A VSL+ + +LG
Sbjct: 205 LAHRIAAVGTGSRPLLHDDESGDTYTAALNRLSTIWDARGEAYTKASARVSLENITLKLG 264
Query: 245 YDDLDAVTTEDMTLE 259
Y + +T ++ +E
Sbjct: 265 YRSVSDLTPAEIAIE 279
>gi|340707718|pdb|3NWJ|A Chain A, Crystal Structure Of Shikimate Kinase From Arabidopsis
Thaliana (Atsk2)
gi|340707719|pdb|3NWJ|B Chain B, Crystal Structure Of Shikimate Kinase From Arabidopsis
Thaliana (Atsk2)
Length = 250
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 103/195 (52%), Gaps = 15/195 (7%)
Query: 80 VKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAK 139
+KKKA ++ L G S++LVGM + KT +GK +A +L Y +FD D+L+ +A G S A+
Sbjct: 35 LKKKAEEVKPYLNGRSMYLVGMMGSGKTTVGKIMARSLGYTFFDCDTLIEQAMKGTSVAE 94
Query: 140 AFRESDEKGYQQAETEVLKQLSSM-GRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGM 198
F E +++ ETE LK+LS M ++VV G GAV N + GIS+W+DVP
Sbjct: 95 IFEHFGESVFREKETEALKKLSLMYHQVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEA 154
Query: 199 VARM--------------DHSGFPESEVLPQLFALYKEMRDGYATADVTVSLQKVASQLG 244
+A D SG + L +L ++ + Y A VSL+ + +LG
Sbjct: 155 LAHRIAAVGTGSRPLLHDDESGDTYTAALNRLSTIWDARGEAYTKASARVSLENITLKLG 214
Query: 245 YDDLDAVTTEDMTLE 259
Y + +T ++ +E
Sbjct: 215 YRSVSDLTPAEIAIE 229
>gi|302769450|ref|XP_002968144.1| hypothetical protein SELMODRAFT_409286 [Selaginella moellendorffii]
gi|300163788|gb|EFJ30398.1| hypothetical protein SELMODRAFT_409286 [Selaginella moellendorffii]
Length = 237
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 109/203 (53%), Gaps = 22/203 (10%)
Query: 62 DTTSNTVTKVAAEDPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYY 121
D + + KV D + A+K + +++ +L GT +FLVGM K+ + K +++AL Y +
Sbjct: 17 DVAAPVIRKVH-NDSALAIKGR--EVAGDLSGTCLFLVGMMGCGKSTVAKDISEALSYEF 73
Query: 122 FDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANL 181
DSD LV E A G + AK F +S E ++ AE+E L QLS +VV G GAV N
Sbjct: 74 QDSDKLV-EKAIGATVAKIFSDSSEDKFRAAESEALNQLSETSNVVVATGGGAVVRDENW 132
Query: 182 ALLRHGISLWIDVP----------------PGMVARM-DHS-GFPESEVLPQLFALYKEM 223
L+ GI++++DVP P +VA D+S G + L +L +Y E
Sbjct: 133 RYLKQGITIYLDVPVEALAQRVVAAGLEKRPLLVASGPDNSPGNAHEQALARLSKVYAER 192
Query: 224 RDGYATADVTVSLQKVASQLGYD 246
Y AD+ +S+ K+AS+LG D
Sbjct: 193 NKAYERADLKISVAKIASELGRD 215
>gi|428220177|ref|YP_007104347.1| shikimate kinase [Synechococcus sp. PCC 7502]
gi|427993517|gb|AFY72212.1| shikimate kinase [Synechococcus sp. PCC 7502]
Length = 184
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 93/168 (55%), Gaps = 13/168 (7%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
L GT+++L+GM A K+ +GK LAD L Y + D+DSLV EA + A+ F ES E G++
Sbjct: 2 LDGTNIYLIGMMGAGKSTIGKLLADRLNYRFVDTDSLV-EACTKRTVAQIFAESGESGFR 60
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMV---ARMDHSGF 207
Q E +VL ++S+ RLVV G G V N + LR+G+ +W+DV + R H
Sbjct: 61 QIEHQVLSEVSAYTRLVVATGGGIVLDRLNWSHLRNGLVVWLDVSMQQLYHRLRSSHHVR 120
Query: 208 PESEV---LPQLFALYKEMRDGYATADVTVSL------QKVASQLGYD 246
P E L L LY++ R YA ADV + + QKV +L D
Sbjct: 121 PLLETADPLATLTKLYEQRRSLYAQADVCLVIDTDDSPQKVCDRLVAD 168
>gi|413938895|gb|AFW73446.1| hypothetical protein ZEAMMB73_578634 [Zea mays]
Length = 257
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 101/194 (52%), Gaps = 13/194 (6%)
Query: 51 KPRITTRSIADDTTSNTVTKVAAEDPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLG 110
KP R A ++ + D + +K+K+ ++ L G ++LVGM + K+ +G
Sbjct: 51 KPVAPLRLRAKKSSGGHENSHNSVDEALLLKRKSEEVLFYLNGRCIYLVGMMGSGKSTVG 110
Query: 111 KFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCA 170
K +++ L Y +FDSD LV +A G S A+ F+ E ++ E+ VL+ LSSM RLVV
Sbjct: 111 KIMSEVLGYSFFDSDKLVEQAVGMPSVAQIFKVHSEAFFRDNESSVLRDLSSMRRLVVAT 170
Query: 171 GNGAVQSSANLALLRHGISLWIDVPPGMVAR------------MDH-SGFPESEVLPQLF 217
G GAV N ++ G+S+W+DVP +AR +D SG P + +L
Sbjct: 171 GGGAVIRPINWRYMKRGLSVWLDVPLDALARRIAKVGTASRPLLDQPSGDPYAMAFSKLS 230
Query: 218 ALYKEMRDGYATAD 231
L ++ D YA AD
Sbjct: 231 MLAQQRGDAYANAD 244
>gi|56750655|ref|YP_171356.1| shikimate kinase [Synechococcus elongatus PCC 6301]
gi|81299703|ref|YP_399911.1| shikimate kinase [Synechococcus elongatus PCC 7942]
gi|81596488|sp|Q5N4D3.1|AROK_SYNP6 RecName: Full=Shikimate kinase; Short=SK
gi|116257513|sp|Q31PU5.1|AROK_SYNE7 RecName: Full=Shikimate kinase; Short=SK
gi|56685614|dbj|BAD78836.1| shikimate kinase [Synechococcus elongatus PCC 6301]
gi|81168584|gb|ABB56924.1| shikimate kinase [Synechococcus elongatus PCC 7942]
Length = 190
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 94/157 (59%), Gaps = 12/157 (7%)
Query: 89 TELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKG 148
T L G +FLVG+ + KT +GK LA++L Y Y D+DSL+ E G S + F E G
Sbjct: 5 TALNGLDLFLVGLMGSGKTTIGKLLAESLGYTYVDTDSLI-ENVTGRSIPEIFASDGEAG 63
Query: 149 YQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVP-PGMVARMDHSGF 207
++Q ET+VL++++S RLVV G G V N + L+ G+ +W+DVP P ++ R++
Sbjct: 64 FRQIETQVLEEVASYRRLVVATGGGIVIRPENWSYLQQGLVIWLDVPIPELLRRLEGD-- 121
Query: 208 PESEVLPQ-------LFALYKEMRDGYATADVTVSLQ 237
++ L Q L AL+++ RD YA AD+ ++++
Sbjct: 122 -QNRPLLQTEAPATTLQALWEQRRDRYAQADLRIAIE 157
>gi|387219603|gb|AFJ69510.1| shikimate kinase, partial [Nannochloropsis gaditana CCMP526]
Length = 450
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 94/173 (54%), Gaps = 20/173 (11%)
Query: 86 DISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESD 145
+I ++G +V+LVGM + KT LG+ LA+ L+Y + D D + E G++A K F E
Sbjct: 210 EIKMRIQGVNVYLVGMPGSGKTTLGRMLAEGLQYRWMDLDQFI-EQKLGKAATKVFEEDG 268
Query: 146 EKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPP-GMVARMDH 204
E+ +++ ET + L + + VV G G +Q NL L G+ +W+D+PP G+VARM
Sbjct: 269 EEVWRKQETLGMGALQTYVQTVVSTGGGIMQRKENLPFLHSGLIVWLDLPPEGIVARMQS 328
Query: 205 SGFPESEVLPQLFA----------LYKEMRDGYATADVTVSLQKVASQLGYDD 247
SG E E P L A LY+E + YA ADV V L+ G DD
Sbjct: 329 SG--EIEKRPLLKAASDPVQAVRSLYEERKGNYALADVRVVLR------GEDD 373
>gi|422295213|gb|EKU22512.1| shikimate kinase, partial [Nannochloropsis gaditana CCMP526]
Length = 446
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 94/173 (54%), Gaps = 20/173 (11%)
Query: 86 DISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESD 145
+I ++G +V+LVGM + KT LG+ LA+ L+Y + D D + E G++A K F E
Sbjct: 206 EIKMRIQGVNVYLVGMPGSGKTTLGRMLAEGLQYRWMDLDQFI-EQKLGKAATKVFEEDG 264
Query: 146 EKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPP-GMVARMDH 204
E+ +++ ET + L + + VV G G +Q NL L G+ +W+D+PP G+VARM
Sbjct: 265 EEVWRKQETLGMGALQTYVQTVVSTGGGIMQRKENLPFLHSGLIVWLDLPPEGIVARMQS 324
Query: 205 SGFPESEVLPQLFA----------LYKEMRDGYATADVTVSLQKVASQLGYDD 247
SG E E P L A LY+E + YA ADV V L+ G DD
Sbjct: 325 SG--EIEKRPLLKAASDPVQAVRSLYEERKGNYALADVRVVLR------GEDD 369
>gi|224066583|ref|XP_002302148.1| shikimate kinase [Populus trichocarpa]
gi|222843874|gb|EEE81421.1| shikimate kinase [Populus trichocarpa]
Length = 223
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 111/194 (57%), Gaps = 14/194 (7%)
Query: 80 VKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAK 139
+KKKA +++ L +FL+GM KT +GK L++AL Y + DSD+ V +A G S A+
Sbjct: 15 LKKKAKELAPCLNSCCIFLIGMMGCGKTTVGKVLSEALGYAFVDSDTCVEQAVGEISVAQ 74
Query: 140 AFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMV 199
F++ E ++ E++ L++LS + VV G+GAV N +R GI++++DVP +
Sbjct: 75 IFQKHGESVFRDNESKALQELSLKSQQVVATGDGAVLHPINWEYMRKGITVFLDVPLDAL 134
Query: 200 AR------------MDH-SGFPESEVLPQLFALYKEMRDGYATADVTVSLQKVASQLGYD 246
AR +D SG P ++ L +L L ++ + ++ADVTVSL K+A L +
Sbjct: 135 ARRIAAVGTDSRPLLDFDSGDPYTKALMRLSTLLEKRVEKCSSADVTVSLSKLADDL-EE 193
Query: 247 DLDAVTTEDMTLEV 260
D+ +T + +EV
Sbjct: 194 DVSHLTPTIIAIEV 207
>gi|414868514|tpg|DAA47071.1| TPA: hypothetical protein ZEAMMB73_523115 [Zea mays]
gi|414868515|tpg|DAA47072.1| TPA: hypothetical protein ZEAMMB73_523115 [Zea mays]
Length = 165
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 73/107 (68%)
Query: 75 DPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGG 134
+PS + ++ A+ + + T +++VG + K ++ K LA+++ Y Y S+ L+ + GG
Sbjct: 58 NPSVDLLRRTAEAVGDFRKTPIYIVGTDCTAKRNIAKLLANSIIYRYLSSEELLEDVLGG 117
Query: 135 ESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANL 181
+ A +AF+ESDEKGY + ETE LKQL+SMG LV+C G+GAV +S NL
Sbjct: 118 KDALRAFKESDEKGYLEVETEGLKQLTSMGSLVLCCGDGAVMNSTNL 164
>gi|86609195|ref|YP_477957.1| shikimate kinase [Synechococcus sp. JA-2-3B'a(2-13)]
gi|115312166|sp|Q2JKT7.1|AROK_SYNJB RecName: Full=Shikimate kinase; Short=SK
gi|86557737|gb|ABD02694.1| shikimate kinase [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 187
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 88/153 (57%), Gaps = 7/153 (4%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
L+G +V+L+GM + K+ +G LA LR+ +FD+D LV E GG S A+ F E E ++
Sbjct: 10 LRGVNVYLIGMMGSGKSTVGSELAAQLRFQFFDTDGLV-EQVGGSSIAQIFAEHGEAYFR 68
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVARMDHSGFPES 210
ET+VL QLSS RLV+ G G V N + L HG+++W+DV P ++ + +
Sbjct: 69 DLETQVLAQLSSYTRLVIATGGGIVLRPKNWSYLHHGLTVWLDVAPELIWQRLKRDPGQR 128
Query: 211 EVL----PQ--LFALYKEMRDGYATADVTVSLQ 237
+L PQ L+ L +E YA ADV V ++
Sbjct: 129 PLLQTPDPQAALYKLMQEREPFYAQADVRVPIR 161
>gi|443478875|ref|ZP_21068568.1| shikimate kinase [Pseudanabaena biceps PCC 7429]
gi|443015775|gb|ELS30595.1| shikimate kinase [Pseudanabaena biceps PCC 7429]
Length = 185
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 85/150 (56%), Gaps = 7/150 (4%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
L GT++FLVGM A K+ +GK LA L Y + D+D L+ E G+S F E ++
Sbjct: 2 LNGTNIFLVGMMGAGKSTIGKLLAQKLSYNFVDTDPLI-EQCAGKSITDIFTHDGEDLFR 60
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMV-----ARMDHS 205
E +VL Q+SS RLVV G G V S N + L GI +WIDVP ++ A ++
Sbjct: 61 DLEQQVLSQVSSYTRLVVATGGGIVLRSLNWSHLHDGIVVWIDVPVDVLHERLKAESENR 120
Query: 206 GFPESEV-LPQLFALYKEMRDGYATADVTV 234
++E L +L +Y++ RD YA AD+++
Sbjct: 121 PLLQTENPLQKLTDIYEQRRDRYAQADISI 150
>gi|334187330|ref|NP_001190969.1| shikimate kinase 2 [Arabidopsis thaliana]
gi|332661685|gb|AEE87085.1| shikimate kinase 2 [Arabidopsis thaliana]
Length = 308
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 103/203 (50%), Gaps = 23/203 (11%)
Query: 80 VKKKAADISTELKGTSVFLV--------GMNNAIKTHLGKFLADALRYYYFDSDSLVFEA 131
+KKKA ++ L G S++L+ GM + KT +GK +A +L Y +FD D+L+ +A
Sbjct: 85 LKKKAEEVKPYLNGRSMYLLNSFLVNALGMMGSGKTTVGKIMARSLGYTFFDCDTLIEQA 144
Query: 132 AGGESAAKAFRESDEKGYQQAETEVLKQLSSM-GRLVVCAGNGAVQSSANLALLRHGISL 190
G S A+ F E +++ ETE LK+LS M ++VV G GAV N + GIS+
Sbjct: 145 MKGTSVAEIFEHFGESVFREKETEALKKLSLMYHQVVVSTGGGAVIRPINWKYMHKGISI 204
Query: 191 WIDVPPGMVARM--------------DHSGFPESEVLPQLFALYKEMRDGYATADVTVSL 236
W+DVP +A D SG + L +L ++ + Y A VSL
Sbjct: 205 WLDVPLEALAHRIAAVGTGSRPLLHDDESGDTYTAALNRLSTIWDARGEAYTKASARVSL 264
Query: 237 QKVASQLGYDDLDAVTTEDMTLE 259
+ + +LGY + +T ++ +E
Sbjct: 265 ENITLKLGYRSVSDLTPAEIAIE 287
>gi|363807180|ref|NP_001242093.1| uncharacterized protein LOC100807736 [Glycine max]
gi|255642221|gb|ACU21375.1| unknown [Glycine max]
Length = 253
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 92/186 (49%), Gaps = 7/186 (3%)
Query: 17 ITPKGLKFDPPFSLLH---SQSYAPIRTSLQYSIISRKPRITTRSIADDTTSNTVTKV-- 71
+ P+ PPFS S+ +R + ++ R+ S + D S ++ +
Sbjct: 15 VQPERFGRRPPFSTCRLGVSREPQSLRVFVSPMMMRRRTTALEVSSSYDNISASILESGS 74
Query: 72 --AAEDPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVF 129
A D +K ++ + L G ++LVGM + KT +GK ++ L Y + DSD+LV
Sbjct: 75 VHAPLDEELILKNRSQETQPYLNGRCIYLVGMMGSGKTTVGKIMSQVLGYSFCDSDALVE 134
Query: 130 EAAGGESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGIS 189
E GG S F + E ++ ETEVL +LS + RLV+ G GAV N + G+S
Sbjct: 135 EEVGGNSVVDIFEQHGETFFRNKETEVLHKLSLLHRLVISTGGGAVMRPINWKYMHKGVS 194
Query: 190 LWIDVP 195
+W+DVP
Sbjct: 195 VWLDVP 200
>gi|145329214|ref|NP_001077936.1| Shikimate kinase [Arabidopsis thaliana]
gi|330252148|gb|AEC07242.1| Shikimate kinase [Arabidopsis thaliana]
Length = 276
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 88/168 (52%), Gaps = 13/168 (7%)
Query: 80 VKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAK 139
+K+KA ++ L G S++LVGM + KT +GK ++ L Y +FD D+L+ +A G S A+
Sbjct: 89 LKRKAEEVKPYLNGRSMYLVGMMGSGKTTVGKLMSKVLGYTFFDCDTLIEQAMNGTSVAE 148
Query: 140 AFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMV 199
F E ++ ET+ LK+LSS ++VV G GAV N + GIS+W+DVP +
Sbjct: 149 IFVHHGENFFRGKETDALKKLSSRYQVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEAL 208
Query: 200 ARM-------------DHSGFPESEVLPQLFALYKEMRDGYATADVTV 234
A D SG S +L A++ E + Y A+ V
Sbjct: 209 AHRIAAVGTDSRPLLHDESGDAYSVAFKRLSAIWDERGEAYTNANARV 256
>gi|254422265|ref|ZP_05035983.1| shikimate kinase domain protein [Synechococcus sp. PCC 7335]
gi|196189754|gb|EDX84718.1| shikimate kinase domain protein [Synechococcus sp. PCC 7335]
Length = 239
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 93/164 (56%), Gaps = 13/164 (7%)
Query: 83 KAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFR 142
+ + +LK T+++L+GM A KT +G+ LA+ L Y + D+D+L+ E + ++ ++ F
Sbjct: 30 RVTQLKADLKKTNLYLIGMMGAGKTTIGRKLANRLGYGFVDTDALI-EQSANQTVSELFA 88
Query: 143 ESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVP-PGMVAR 201
+ E ++Q ET+VL Q+S+ LVV G G + N + L HGI +W+DVP P +VAR
Sbjct: 89 SAGESVFRQLETQVLSQVSTYTNLVVATGGGVIIEQMNWSYLHHGIIIWLDVPIPILVAR 148
Query: 202 MD-HSGFP----------ESEVLPQLFALYKEMRDGYATADVTV 234
+ S P ++ + +L L E RD YA AD+ +
Sbjct: 149 LSGDSSRPLIKDSRPLIKDTNLSDRLAGLIAERRDLYAQADIRI 192
>gi|428226691|ref|YP_007110788.1| shikimate kinase [Geitlerinema sp. PCC 7407]
gi|427986592|gb|AFY67736.1| shikimate kinase [Geitlerinema sp. PCC 7407]
Length = 194
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 90/156 (57%), Gaps = 6/156 (3%)
Query: 87 ISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDE 146
+++ LKG +++L+GM A K+ +G+ LA L Y++FD+D+L+ E A G+S + F ES E
Sbjct: 3 VTSILKGVNLYLIGMMGAGKSTVGRLLASRLGYHFFDTDALI-EQATGQSVRQIFAESGE 61
Query: 147 KGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVP-PGMVARMDHS 205
++Q E++VL QL + L++ G G V + N + LRHG+ +W+DVP + R+
Sbjct: 62 AIFRQLESQVLAQLCAQKNLLISTGGGIVTTPFNWSYLRHGVVVWLDVPVDTLYERLRRD 121
Query: 206 G----FPESEVLPQLFALYKEMRDGYATADVTVSLQ 237
G + L L L + YA AD+ +S Q
Sbjct: 122 GDRPLLQTPDPLQTLTDLLAQRERLYAQADLRLSTQ 157
>gi|411118274|ref|ZP_11390655.1| shikimate kinase [Oscillatoriales cyanobacterium JSC-12]
gi|410711998|gb|EKQ69504.1| shikimate kinase [Oscillatoriales cyanobacterium JSC-12]
Length = 190
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 82/154 (53%), Gaps = 6/154 (3%)
Query: 87 ISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDE 146
+S L+G +++L+GM A KT +G+ +A AL Y +FD+D+ V E G+ F E E
Sbjct: 5 LSDRLQGINLYLIGMMGAGKTTVGRLIAQALGYQFFDTDA-VIEQVTGQPITALFTEMGE 63
Query: 147 KGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVARMDHSG 206
G+++ ET VL +LS+ RL + G G V N LRHG+ +W+DVP + + S
Sbjct: 64 AGFRELETRVLAELSTYTRLAIATGGGIVLRHENWGYLRHGVIVWLDVPLEQLQQRLQSD 123
Query: 207 -----FPESEVLPQLFALYKEMRDGYATADVTVS 235
++ +L L + R YA ADV V
Sbjct: 124 TNRPLLQTGDLTTRLQTLLDQRRSLYAQADVHVG 157
>gi|255583009|ref|XP_002532273.1| Shikimate kinase, chloroplast precursor, putative [Ricinus
communis]
gi|223528033|gb|EEF30113.1| Shikimate kinase, chloroplast precursor, putative [Ricinus
communis]
Length = 313
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 72/124 (58%)
Query: 72 AAEDPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEA 131
A+ D S +K K+ + L G ++LVGM + KT +GK L+ L Y + D DSL+ +
Sbjct: 85 ASSDESLILKNKSQVVEPYLSGRCIYLVGMMGSGKTTVGKVLSQVLGYSFCDCDSLIEQD 144
Query: 132 AGGESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLW 191
G S A+ F+ E ++ ETEVLK LS M ++VV G GAV N ++ GIS+W
Sbjct: 145 VDGTSVAEIFKLYGEGFFRMKETEVLKNLSMMHQIVVSTGGGAVIRPINWEYMQKGISVW 204
Query: 192 IDVP 195
+DVP
Sbjct: 205 LDVP 208
>gi|86607258|ref|YP_476021.1| shikimate kinase [Synechococcus sp. JA-3-3Ab]
gi|115312165|sp|Q2JRJ6.1|AROK_SYNJA RecName: Full=Shikimate kinase; Short=SK
gi|86555800|gb|ABD00758.1| shikimate kinase [Synechococcus sp. JA-3-3Ab]
Length = 189
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 88/160 (55%), Gaps = 7/160 (4%)
Query: 88 STELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEK 147
+ L+G +V+L+GM + K+ LG LA LR +FD+D+LV + AG S A+ F E E
Sbjct: 7 AERLRGVTVYLIGMMASGKSTLGAELAAQLRRPFFDTDALVEQVAGC-SIAQIFAEQGEA 65
Query: 148 GYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVARMDHSGF 207
+++ ET+VL QLS RLVV G G V N + L HG+++W+D P ++ +
Sbjct: 66 HFRELETQVLAQLSGYTRLVVATGGGIVLRPKNWSYLHHGLTVWLDAAPELIWQRLKRDP 125
Query: 208 PESEVL----PQ--LFALYKEMRDGYATADVTVSLQKVAS 241
+ +L PQ L L +E YA ADV V + AS
Sbjct: 126 GQRPLLQTPDPQAALQRLMQEREPFYAQADVRVPIHSEAS 165
>gi|113475204|ref|YP_721265.1| shikimate kinase [Trichodesmium erythraeum IMS101]
gi|110166252|gb|ABG50792.1| shikimate kinase [Trichodesmium erythraeum IMS101]
Length = 184
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 89/158 (56%), Gaps = 8/158 (5%)
Query: 86 DISTE--LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRE 143
DIS L+G +++LVGM A KT +G LA L Y + D+D+L+ +AAG +S + F
Sbjct: 2 DISNRKLLQGVNLYLVGMMGAGKTTVGHLLAQHLGYSFLDTDNLITQAAG-KSINEIFAT 60
Query: 144 SDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMV-ARM 202
E +++ ET +L ++SS L + G G V S N + LRHGI +W+DVP ++ +R+
Sbjct: 61 EGEAAFRELETNILSEISSYKNLTIATGGGIVISRFNWSYLRHGIVVWLDVPVEVLYSRL 120
Query: 203 DHSG----FPESEVLPQLFALYKEMRDGYATADVTVSL 236
S L +L A+ +E R Y ADV V++
Sbjct: 121 QGDQTRPLIQNSNPLARLQAILEERRPFYNCADVHVNV 158
>gi|334121375|ref|ZP_08495445.1| Shikimate kinase [Microcoleus vaginatus FGP-2]
gi|333455089|gb|EGK83750.1| Shikimate kinase [Microcoleus vaginatus FGP-2]
Length = 183
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 84/149 (56%), Gaps = 6/149 (4%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
L+G +++LVGM + KT +G+ LA L+Y +FD+D L+ A +S A+ F + E+ ++
Sbjct: 4 LRGVNIYLVGMMGSGKTTVGRILAKKLKYRFFDTDELIVRVAN-QSIAEIFAQEGEEAFR 62
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMV---ARMDHSG- 206
+ ET+VL +LS+ VV G G V S N L +G+ +W+DVP + R D +
Sbjct: 63 ELETKVLGELSAYQNSVVATGGGIVARSMNWGYLHYGVVVWLDVPVDQLYDRLRSDTARP 122
Query: 207 -FPESEVLPQLFALYKEMRDGYATADVTV 234
E E+ +L +L KE Y ADV V
Sbjct: 123 LLQEGEIKSKLQSLLKERERFYTQADVRV 151
>gi|166364892|ref|YP_001657165.1| shikimate kinase [Microcystis aeruginosa NIES-843]
gi|238687539|sp|B0JFW8.1|AROK_MICAN RecName: Full=Shikimate kinase; Short=SK
gi|166087265|dbj|BAG01973.1| shikimate kinase [Microcystis aeruginosa NIES-843]
Length = 190
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 86/149 (57%), Gaps = 6/149 (4%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
L+G SVFL+GM + K+ LG+ L+ L+Y +FD+D L+ E G+ + F + E ++
Sbjct: 10 LRGLSVFLLGMMGSGKSTLGELLSRRLQYRFFDTDILI-ERVAGKKIREIFVDEGEATFR 68
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVP-PGMVARMDHSG--- 206
+ ET+VL +LSS+ + V+ G G V N + LRHG+ +W+DVP +V R+
Sbjct: 69 ELETQVLAELSSLTKTVIATGGGMVLKPMNWSYLRHGLMIWLDVPLEILVKRLKQDTSRP 128
Query: 207 -FPESEVLPQLFALYKEMRDGYATADVTV 234
+++ +L L ++ R YA AD+ +
Sbjct: 129 LLQSTDLDSKLELLLEQRRGLYAEADLRI 157
>gi|413924547|gb|AFW64479.1| hypothetical protein ZEAMMB73_201621 [Zea mays]
Length = 185
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 83/151 (54%), Gaps = 13/151 (8%)
Query: 122 FDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANL 181
F SD LV +A G S A+ F+ E ++ E+ VL+ LSSM RLVV G GAV N
Sbjct: 2 FYSDKLVEQAVGMPSVAQIFKVHSEAFFRDNESSVLRDLSSMRRLVVATGGGAVIRPVNW 61
Query: 182 ALLRHGISLWIDVPPGMVAR------------MDH-SGFPESEVLPQLFALYKEMRDGYA 228
++ G+S+W+DVP +AR +D SG P + +L L ++ D YA
Sbjct: 62 KYMKKGLSVWLDVPLDALARRIAKVGTASRPLLDQPSGDPYTMAFSKLSMLAEQRGDAYA 121
Query: 229 TADVTVSLQKVASQLGYDDLDAVTTEDMTLE 259
ADV VSL+++AS+ G+ D+ + D+ +E
Sbjct: 122 NADVRVSLEEIASKQGHGDVSKLMPTDIAIE 152
>gi|443323785|ref|ZP_21052788.1| shikimate kinase [Gloeocapsa sp. PCC 73106]
gi|442786571|gb|ELR96301.1| shikimate kinase [Gloeocapsa sp. PCC 73106]
Length = 183
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 88/156 (56%), Gaps = 6/156 (3%)
Query: 87 ISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDE 146
+S LKG +V+LVGM K+ +G+ LA L Y +FDSD+ V E + + F E
Sbjct: 4 LSDRLKGINVYLVGMMGTGKSTIGQILAHNLEYRFFDSDT-VLERVAQANITEIFATEGE 62
Query: 147 KGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVAR---MD 203
+ +++ ET+VL QL + R V+ G G V N + L HG+ +W+D P ++ + +D
Sbjct: 63 EVFRELETQVLSQLCAYTRSVIATGGGVVLKPKNWSYLHHGLVIWLDAPVELLYQRLAID 122
Query: 204 HSG--FPESEVLPQLFALYKEMRDGYATADVTVSLQ 237
+ S++L +L +L ++ R YA AD+ +++Q
Sbjct: 123 QTRPLLNGSDLLGKLTSLQEQRRSFYAEADLKITIQ 158
>gi|119491298|ref|ZP_01623352.1| shikimate kinase [Lyngbya sp. PCC 8106]
gi|119453462|gb|EAW34624.1| shikimate kinase [Lyngbya sp. PCC 8106]
Length = 193
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 81/151 (53%), Gaps = 6/151 (3%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
L+G +++L+GM A KT +GK LA Y + D+D ++ + AG +S + F E E+ ++
Sbjct: 5 LRGINLYLIGMMGAGKTTVGKLLAKQFNYRFIDTDEVITQVAG-QSINQIFTEQGEEAFR 63
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDV-PPGMVARMDHSG--- 206
E++VL L + RLVV G G + AN LRHG+ +W+DV P + R+
Sbjct: 64 TLESQVLSGLCAHQRLVVATGGGIILQRANWGYLRHGLIVWLDVSPEDLYQRLKEDTTRP 123
Query: 207 -FPESEVLPQLFALYKEMRDGYATADVTVSL 236
L +L L K+ YA ADV V++
Sbjct: 124 LLQHDNPLGRLQELLKQRESLYAEADVKVTI 154
>gi|390440354|ref|ZP_10228690.1| Shikimate kinase [Microcystis sp. T1-4]
gi|389836236|emb|CCI32816.1| Shikimate kinase [Microcystis sp. T1-4]
Length = 190
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 67/105 (63%), Gaps = 1/105 (0%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
L+G SVFL+GM A K+ LG+ L+ L+Y +FD+D L+ E G+ + F + E ++
Sbjct: 10 LRGLSVFLLGMMGAGKSTLGELLSRRLQYRFFDTDILI-ERVAGKKIRQIFADEGEATFR 68
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVP 195
+ ET+VL +LSS+ + V+ G G V N + LRHG+ +W+DVP
Sbjct: 69 ELETQVLAELSSLTKTVIATGGGMVLKPMNWSYLRHGLMIWLDVP 113
>gi|425442960|ref|ZP_18823194.1| Shikimate kinase [Microcystis aeruginosa PCC 9717]
gi|389715849|emb|CCH99842.1| Shikimate kinase [Microcystis aeruginosa PCC 9717]
Length = 190
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 67/105 (63%), Gaps = 1/105 (0%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
L+G SVFL+GM A K+ LG+ L+ L+Y +FD+D L+ E G+ + F + E ++
Sbjct: 10 LRGLSVFLLGMMGAGKSTLGELLSRRLQYRFFDTDILI-ERVAGKKIREIFADEGEATFR 68
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVP 195
+ ET+VL +LSS+ + V+ G G V N + LRHG+ +W+DVP
Sbjct: 69 ELETQVLAELSSLTKTVIATGGGMVLKPMNWSYLRHGLMIWLDVP 113
>gi|425459812|ref|ZP_18839298.1| Shikimate kinase [Microcystis aeruginosa PCC 9808]
gi|389827663|emb|CCI20915.1| Shikimate kinase [Microcystis aeruginosa PCC 9808]
Length = 190
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 67/105 (63%), Gaps = 1/105 (0%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
L+G SVFL+GM A K+ LG+ L+ L+Y +FD+D L+ E G+ + F + E ++
Sbjct: 10 LRGLSVFLLGMMGAGKSTLGELLSRRLQYRFFDTDILI-ERVAGKKIREIFADEGEATFR 68
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVP 195
+ ET+VL +LSS+ + V+ G G V N + LRHG+ +W+DVP
Sbjct: 69 ELETQVLAELSSLTKTVIATGGGMVLKPMNWSYLRHGLMIWLDVP 113
>gi|307155208|ref|YP_003890592.1| shikimate kinase [Cyanothece sp. PCC 7822]
gi|306985436|gb|ADN17317.1| Shikimate kinase [Cyanothece sp. PCC 7822]
Length = 183
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 90/164 (54%), Gaps = 12/164 (7%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
LKG S+FL+GM KT +G+ LA+ L Y +FDSD L+ E G + + F E+ ++
Sbjct: 6 LKGVSIFLIGMPGTGKTTVGELLAEKLGYRFFDSDVLI-ERVSGNTVNEIFNTLGEEAFR 64
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPG-MVARMDHSG--- 206
+ E++VL +L S + ++ G G V N + LRHG+ +W+D P ++ R+
Sbjct: 65 KIESQVLSELCSYTKSIIATGGGIVIKQMNWSYLRHGLIIWLDSPVDLLIQRLKEDSTRP 124
Query: 207 -FPESEVLPQLFALYKEMRDGYATADVTVSL------QKVASQL 243
+ ++ +L +L+ + R Y AD+ +S+ +++ SQ+
Sbjct: 125 LLRDVDLEQKLQSLWTQRRPLYKQADLQISITEHQTPEQIVSQI 168
>gi|170079112|ref|YP_001735750.1| shikimate kinase [Synechococcus sp. PCC 7002]
gi|169886781|gb|ACB00495.1| shikimate kinase [Synechococcus sp. PCC 7002]
Length = 186
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 85/151 (56%), Gaps = 6/151 (3%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
LKG +++L+GM K+ L + +A+ + Y DSDS++ E +S ++ F E E ++
Sbjct: 5 LKGLNIYLIGMMGTGKSTLAEIIAELMNYRSLDSDSII-ETLAKQSISEIFAEMGEAEFR 63
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVP-PGMVARM----DHS 205
+ ET+VLKQ++ R VV G G V S AN LR G+++W+DVP P +V R+
Sbjct: 64 KLETQVLKQIAVQTRTVVATGGGIVVSQANWYYLRQGLTIWLDVPVPILVERLRSDTSRP 123
Query: 206 GFPESEVLPQLFALYKEMRDGYATADVTVSL 236
++ +L L ++ R YA AD+ + +
Sbjct: 124 LLQNVDLERKLTQLLQQRRSRYAEADLHIQI 154
>gi|148241390|ref|YP_001226547.1| shikimate kinase [Synechococcus sp. RCC307]
gi|254806784|sp|A5GQN5.1|AROK_SYNR3 RecName: Full=Shikimate kinase; Short=SK
gi|147849700|emb|CAK27194.1| Shikimate kinase [Synechococcus sp. RCC307]
Length = 195
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 86/157 (54%), Gaps = 7/157 (4%)
Query: 87 ISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDE 146
+ L+GT+++LVGM + K+ +G LA AL Y + D+D+++ +AAG S + F E
Sbjct: 10 LGERLQGTNLYLVGMMGSGKSTVGPLLAKALGYRFLDADAVISQAAGC-SIPEIFERDGE 68
Query: 147 KGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVARM---D 203
+G++Q E +VL+QLS LVV G G V AN LR G+ +W+DV + R D
Sbjct: 69 EGFRQLERQVLQQLSQWHSLVVATGGGIVTVPANWGELRQGVVIWLDVAEEELMRRLQAD 128
Query: 204 HSGFP---ESEVLPQLFALYKEMRDGYATADVTVSLQ 237
G P + +L L ++ + Y AD+ VS Q
Sbjct: 129 PGGRPLLAGDDPAGRLHGLLEKRQPLYGQADLRVSAQ 165
>gi|427704162|ref|YP_007047384.1| shikimate kinase [Cyanobium gracile PCC 6307]
gi|427347330|gb|AFY30043.1| shikimate kinase [Cyanobium gracile PCC 6307]
Length = 215
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 85/158 (53%), Gaps = 7/158 (4%)
Query: 86 DISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESD 145
D++ L G +++LVGM A K+ +G+ LA+AL Y + D+D+ + E AG A+ F
Sbjct: 15 DLARRLDGLNIYLVGMMGAGKSAVGRPLAEALGYRFIDADTALGEVAG-RPIAEIFASDG 73
Query: 146 EKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPG-MVARMDH 204
E G++ ET VL ++S LVV G GAV N +R G+ +W+D P +V R+
Sbjct: 74 EDGFRTLETAVLNGIASWHSLVVATGGGAVIRPENWGHMRQGLVVWLDAPADELVRRLAA 133
Query: 205 SGFPE-----SEVLPQLFALYKEMRDGYATADVTVSLQ 237
P + +L AL E R YA AD+TV+ Q
Sbjct: 134 DPTPRPLLDAPDPAARLEALLHERRPLYAQADLTVAQQ 171
>gi|425467327|ref|ZP_18846610.1| Shikimate kinase [Microcystis aeruginosa PCC 9809]
gi|389829918|emb|CCI28391.1| Shikimate kinase [Microcystis aeruginosa PCC 9809]
Length = 190
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 67/105 (63%), Gaps = 1/105 (0%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
L+G SVFL+GM + K+ LG+ L+ L+Y +FD+D L+ E G+ + F + E ++
Sbjct: 10 LRGLSVFLLGMMGSGKSTLGELLSRRLQYRFFDTDILI-ERVAGKKIREIFADEGEATFR 68
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVP 195
+ ET+VL +LSS+ + V+ G G V N + LRHG+ +W+DVP
Sbjct: 69 ELETQVLAELSSLTKTVIATGGGMVLKPMNWSYLRHGLMIWLDVP 113
>gi|428319260|ref|YP_007117142.1| shikimate kinase [Oscillatoria nigro-viridis PCC 7112]
gi|428242940|gb|AFZ08726.1| shikimate kinase [Oscillatoria nigro-viridis PCC 7112]
Length = 183
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 81/150 (54%), Gaps = 6/150 (4%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
L+G +++LVGM A KT +G+ LA L+Y +FD+D L+ +S A+ F E+ ++
Sbjct: 4 LRGVNIYLVGMMGAGKTTVGRILAKKLKYRFFDTDELIVRVTN-QSIAEIFDREGEEAFR 62
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMV---ARMDHSG- 206
+ ET+VL +LS+ VV G G V S N L +G+ +W+DVP + R D +
Sbjct: 63 ELETKVLGELSAYKNSVVATGGGIVTRSMNWGYLHYGVVVWLDVPVDQLYDRLRSDTARP 122
Query: 207 -FPESEVLPQLFALYKEMRDGYATADVTVS 235
E E+ +L +L E Y ADV V
Sbjct: 123 LLQEGEIKSKLQSLLNERERLYTQADVRVC 152
>gi|425452721|ref|ZP_18832536.1| Shikimate kinase [Microcystis aeruginosa PCC 7941]
gi|389765347|emb|CCI08717.1| Shikimate kinase [Microcystis aeruginosa PCC 7941]
Length = 190
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 67/105 (63%), Gaps = 1/105 (0%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
L+G SVFL+GM + K+ LG+ L+ L+Y +FD+D L+ E G+ + F + E ++
Sbjct: 10 LRGLSVFLLGMMGSGKSTLGELLSRRLQYRFFDTDILI-ERVAGKKIREIFADEGEATFR 68
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVP 195
+ ET+VL +LSS+ + V+ G G V N + LRHG+ +W+DVP
Sbjct: 69 ELETQVLAELSSLTKTVIATGGGMVLKPMNWSYLRHGLMIWLDVP 113
>gi|425438084|ref|ZP_18818493.1| Shikimate kinase [Microcystis aeruginosa PCC 9432]
gi|389676823|emb|CCH94217.1| Shikimate kinase [Microcystis aeruginosa PCC 9432]
Length = 190
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 67/105 (63%), Gaps = 1/105 (0%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
L+G SVFL+GM + K+ LG+ L+ L+Y +FD+D L+ E G+ + F + E ++
Sbjct: 10 LRGLSVFLLGMMGSGKSTLGELLSRRLQYRFFDTDILI-ERVAGKKIREIFADEGEATFR 68
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVP 195
+ ET+VL +LSS+ + V+ G G V N + LRHG+ +W+DVP
Sbjct: 69 ELETQVLAELSSLTKTVIATGGGMVLKPMNWSYLRHGLMIWLDVP 113
>gi|440755112|ref|ZP_20934314.1| shikimate kinase family protein [Microcystis aeruginosa TAIHU98]
gi|440175318|gb|ELP54687.1| shikimate kinase family protein [Microcystis aeruginosa TAIHU98]
Length = 190
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 67/105 (63%), Gaps = 1/105 (0%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
L+G SVFL+GM + K+ LG+ L+ L+Y +FD+D L+ E G+ + F + E ++
Sbjct: 10 LRGLSVFLLGMMGSGKSTLGELLSRRLQYRFFDTDILI-ERVAGKKIREIFADEGEATFR 68
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVP 195
+ ET+VL +LSS+ + V+ G G V N + LRHG+ +W+DVP
Sbjct: 69 ELETQVLAELSSLTKTVIATGGGMVLKPMNWSYLRHGLMIWLDVP 113
>gi|425455716|ref|ZP_18835429.1| Shikimate kinase [Microcystis aeruginosa PCC 9807]
gi|389803372|emb|CCI17712.1| Shikimate kinase [Microcystis aeruginosa PCC 9807]
Length = 190
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 67/105 (63%), Gaps = 1/105 (0%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
L+G SVFL+GM + K+ LG+ L+ L+Y +FD+D L+ E G+ + F + E ++
Sbjct: 10 LRGLSVFLLGMMGSGKSTLGELLSRRLQYRFFDTDILI-ERVAGKKIREIFADEGEATFR 68
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVP 195
+ ET+VL +LSS+ + V+ G G V N + LRHG+ +W+DVP
Sbjct: 69 ELETQVLAELSSLTKTVIATGGGMVLKPINWSYLRHGLMIWLDVP 113
>gi|425472135|ref|ZP_18850986.1| Shikimate kinase [Microcystis aeruginosa PCC 9701]
gi|389881854|emb|CCI37641.1| Shikimate kinase [Microcystis aeruginosa PCC 9701]
Length = 190
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 67/105 (63%), Gaps = 1/105 (0%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
L+G SVFL+GM + K+ LG+ L+ L+Y +FD+D L+ E G+ + F + E ++
Sbjct: 10 LRGLSVFLLGMMGSGKSTLGELLSRRLQYRFFDTDILI-ERVAGKKIREIFVDEGEATFR 68
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVP 195
+ ET+VL +LSS+ + V+ G G V N + LRHG+ +W+DVP
Sbjct: 69 ELETQVLAELSSLTKTVIATGGGMVLKPMNWSYLRHGLMIWLDVP 113
>gi|428311952|ref|YP_007122929.1| shikimate kinase [Microcoleus sp. PCC 7113]
gi|428253564|gb|AFZ19523.1| shikimate kinase [Microcoleus sp. PCC 7113]
Length = 178
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 81/152 (53%), Gaps = 6/152 (3%)
Query: 90 ELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGY 149
ELKG +VFLVGM KT +G LA L Y + D+D+ V E A G+S + F + E+ +
Sbjct: 3 ELKGINVFLVGMMGTGKTTVGDLLARQLGYSFVDTDN-VIEKAAGKSINQIFADEGEEAF 61
Query: 150 QQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVP-PGMVARMDHSG-- 206
+Q E+EVL LS+ RL V G G V N + L HG+ +W+D P ++AR+ +
Sbjct: 62 RQLESEVLSHLSAHTRLTVATGGGIVLKRFNWSYLHHGLVIWLDSPVEVLMARLQNDTTR 121
Query: 207 --FPESEVLPQLFALYKEMRDGYATADVTVSL 236
L + + R+ YA AD+ + +
Sbjct: 122 PLLQNDNPAQALQTILDQRRNLYAEADLHIQI 153
>gi|443653401|ref|ZP_21131078.1| shikimate kinase family protein [Microcystis aeruginosa DIANCHI905]
gi|159030194|emb|CAO91086.1| aroK [Microcystis aeruginosa PCC 7806]
gi|443334040|gb|ELS48570.1| shikimate kinase family protein [Microcystis aeruginosa DIANCHI905]
Length = 190
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 67/105 (63%), Gaps = 1/105 (0%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
L+G SVFL+GM + K+ LG+ L+ L+Y +FD+D L+ E G+ + F + E ++
Sbjct: 10 LRGLSVFLLGMMGSGKSTLGELLSRRLQYRFFDTDILI-ERVAGKKIREIFADEGEATFR 68
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVP 195
+ ET+VL +LSS+ + V+ G G V N + LRHG+ +W+DVP
Sbjct: 69 ELETQVLAELSSLTKTVIATGGGMVLKPINWSYLRHGLMIWLDVP 113
>gi|422302513|ref|ZP_16389875.1| Shikimate kinase [Microcystis aeruginosa PCC 9806]
gi|389788246|emb|CCI16208.1| Shikimate kinase [Microcystis aeruginosa PCC 9806]
Length = 190
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 67/105 (63%), Gaps = 1/105 (0%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
L+G SVFL+GM + K+ LG+ L+ L+Y +FD+D L+ E G+ + F + E ++
Sbjct: 10 LRGLSVFLLGMMGSGKSTLGELLSRRLQYRFFDTDILI-ERVAGKKIREIFADEGEATFR 68
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVP 195
+ ET+VL +LSS+ + V+ G G V N + LRHG+ +W+DVP
Sbjct: 69 ELETQVLVELSSLTKTVIATGGGMVLKPINWSYLRHGLMIWLDVP 113
>gi|425444946|ref|ZP_18824986.1| Shikimate kinase [Microcystis aeruginosa PCC 9443]
gi|389735150|emb|CCI01281.1| Shikimate kinase [Microcystis aeruginosa PCC 9443]
Length = 190
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 67/105 (63%), Gaps = 1/105 (0%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
L+G SVFL+GM + K+ LG+ L+ L+Y +FD+D L+ E G+ + F + E ++
Sbjct: 10 LRGLSVFLLGMMGSGKSTLGELLSRRLQYRFFDTDILI-ERVAGKKIREIFADEGEGTFR 68
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVP 195
+ ET+VL +LSS+ + V+ G G V N + LRHG+ +W+DVP
Sbjct: 69 ELETQVLAELSSLTKTVIATGGGMVLKPINWSYLRHGLMIWLDVP 113
>gi|332711887|ref|ZP_08431817.1| shikimate kinase [Moorea producens 3L]
gi|332349215|gb|EGJ28825.1| shikimate kinase [Moorea producens 3L]
Length = 182
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 68/109 (62%), Gaps = 1/109 (0%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
LKG +VFL+GM A KT +G LA L Y + D+D+L+ E G++ + F E E+ ++
Sbjct: 5 LKGINVFLIGMMGAGKTTVGGLLASELGYGFCDTDALI-EQIAGKTINEIFAEDGEETFR 63
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMV 199
Q ET+VL QLS+ +L+V G G V N + L +G+ +W+DVP M+
Sbjct: 64 QLETQVLSQLSAYQQLIVATGGGIVLKPQNWSYLHYGLVVWLDVPVAML 112
>gi|428773167|ref|YP_007164955.1| shikimate kinase [Cyanobacterium stanieri PCC 7202]
gi|428687446|gb|AFZ47306.1| shikimate kinase [Cyanobacterium stanieri PCC 7202]
Length = 184
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 95/175 (54%), Gaps = 17/175 (9%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
L+G +V+L+GM + K+ +GKFLA L Y + D+D+ + E +S K F E E+ ++
Sbjct: 5 LRGLNVYLIGMMGSGKSTVGKFLAHKLAYRFLDTDNTI-ETLTQKSINKIFEEDGEEVFR 63
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPG-MVARM-DHSGFP 208
E +VL Q+SS V+ G G V N A LR G+ +W+DVP +V R+ D P
Sbjct: 64 TLENQVLAQVSSYLHTVISTGGGIVLKKDNWAHLRDGMVIWLDVPVDVLVQRLKDDRSRP 123
Query: 209 ---ESEVLPQLFALYKEMRDGYATADVTVSLQKVASQLGYDDLDAVTTEDMTLEV 260
E+++ +L + + + YA AD+T+++ A Q TTED+ E+
Sbjct: 124 LLKETDLQEKLTTILAQRKHLYAQADLTITIN--AEQ---------TTEDIVAEI 167
>gi|300865613|ref|ZP_07110388.1| shikimate kinase [Oscillatoria sp. PCC 6506]
gi|300336397|emb|CBN55538.1| shikimate kinase [Oscillatoria sp. PCC 6506]
Length = 176
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 87/151 (57%), Gaps = 6/151 (3%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
L+G +++LVGM A KT +G++LA L Y++FD+D ++ + A S ++ F E+ ++
Sbjct: 4 LRGVNLYLVGMMGAGKTTVGRWLASELGYHFFDTDDVISKVAN-LSISEIFARDGEEAFR 62
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVA---RMDHSG- 206
Q E++VL +LS+ +L+V G G V N + L HGI +W+DVP + R D+S
Sbjct: 63 QLESQVLGELSAYKKLIVATGGGIVLRQMNWSYLHHGIVVWLDVPVEELCDRLREDNSRP 122
Query: 207 -FPESEVLPQLFALYKEMRDGYATADVTVSL 236
E E L + + + YA ADV V++
Sbjct: 123 LLREGEPRAILQNILNQRQRFYAQADVRVAV 153
>gi|428211742|ref|YP_007084886.1| shikimate kinase [Oscillatoria acuminata PCC 6304]
gi|428000123|gb|AFY80966.1| shikimate kinase [Oscillatoria acuminata PCC 6304]
Length = 182
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 65/105 (61%), Gaps = 1/105 (0%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
LKG +++L+GM + KT + + LA L Y Y DSD L+ E G+S + F ES E ++
Sbjct: 5 LKGCNLYLIGMMGSGKTTVAQILAPQLEYRYLDSDRLI-EQVAGQSIPEIFAESGEAAFR 63
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVP 195
+ ET+VL +L + LVV G G + + N + L+HG+ +W+DVP
Sbjct: 64 ELETKVLSELCAYTHLVVATGGGIILNRQNWSYLQHGVVVWLDVP 108
>gi|428297809|ref|YP_007136115.1| shikimate kinase [Calothrix sp. PCC 6303]
gi|428234353|gb|AFZ00143.1| shikimate kinase [Calothrix sp. PCC 6303]
Length = 181
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 87/157 (55%), Gaps = 16/157 (10%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
LKG +++LVGM A KT LG+ LA L Y + DSD ++ +AAG ++ ++ F E E ++
Sbjct: 5 LKGLNLYLVGMMGAGKTTLGRLLAKDLGYGFVDSDDVITKAAG-KNISQIFAEDGEDAFR 63
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVAR--------- 201
Q E++VL Q+++ RL + G G + N + LR G+ +W+DVP + R
Sbjct: 64 QLESDVLGQIAAFTRLTIATGGGIILKRENWSYLRQGLVVWLDVPVAELERRLREDTTRP 123
Query: 202 -MDHSGFPESEVLPQLFALYKEMRDGYATADVTVSLQ 237
+ +G E +L +L + Y+ +D+ +++Q
Sbjct: 124 LLQDTGLEE-----KLVSLMETRYPLYSQSDLKITIQ 155
>gi|414079234|ref|YP_007000658.1| shikimate kinase [Anabaena sp. 90]
gi|413972513|gb|AFW96601.1| shikimate kinase [Anabaena sp. 90]
Length = 178
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 88/151 (58%), Gaps = 6/151 (3%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
LKG +++L+GM KT +GK LA + Y + D+D ++ +AAG +S + F E+ E ++
Sbjct: 5 LKGVNLYLIGMMGVGKTTVGKLLAAEIGYRFVDTDEVIIKAAG-KSINEIFAENGEAEFR 63
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMV-ARMDHSG--- 206
Q E++VL Q + +L++ G G N + L HG+ +W+D P G++ R+
Sbjct: 64 QLESDVLAQACAYTKLIISTGGGVPMQQQNWSYLHHGLIIWLDAPIGIILQRLAEDNTRP 123
Query: 207 -FPESEVLPQLFALYKEMRDGYATADVTVSL 236
++++ +L +L+++ + Y+ AD+ +++
Sbjct: 124 LLQDADIESKLTSLWEQRQPMYSQADLHITM 154
>gi|119512821|ref|ZP_01631889.1| shikimate kinase [Nodularia spumigena CCY9414]
gi|119462543|gb|EAW43512.1| shikimate kinase [Nodularia spumigena CCY9414]
Length = 192
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 69/109 (63%), Gaps = 1/109 (0%)
Query: 87 ISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDE 146
+S+ L+G +++L+GM A KT +G+ LA L Y + D+DS++ ++AG S + F E E
Sbjct: 12 VSSLLQGVNLYLIGMMGAGKTTVGQLLAKHLGYGFLDTDSVITQSAG-RSINQLFAEEGE 70
Query: 147 KGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVP 195
++Q E++VL Q+ + RL + G G + + N + L HG+ +W+DVP
Sbjct: 71 AAFRQLESDVLAQVCAYTRLTIATGGGIILRTENWSYLHHGLVVWLDVP 119
>gi|262181535|gb|ACY29658.1| shikimate kinase 02 [Vitis vinifera]
Length = 228
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 71/127 (55%)
Query: 75 DPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGG 134
D + +K K+ +I + G V+LVGM + KT +GK L + L Y + DSD+LV A G
Sbjct: 84 DEALILKNKSQEILPYIDGRCVYLVGMMGSGKTTIGKILPEVLGYSFCDSDTLVELAVKG 143
Query: 135 ESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDV 194
S A+ F E ++ E+E L++LS +VV G GAV N + GIS+W+DV
Sbjct: 144 TSVAEIFNLYGEGFFRNKESETLQKLSLTHHMVVSTGGGAVIRPINWKYMAKGISVWLDV 203
Query: 195 PPGMVAR 201
P +AR
Sbjct: 204 PLEALAR 210
>gi|428306365|ref|YP_007143190.1| shikimate kinase [Crinalium epipsammum PCC 9333]
gi|428247900|gb|AFZ13680.1| shikimate kinase [Crinalium epipsammum PCC 9333]
Length = 184
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 91/151 (60%), Gaps = 6/151 (3%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
L G +V+L+GM A KT +G+ L++ L Y +FD+D+L+ E ++ + F ++ E+G++
Sbjct: 2 LNGVNVYLIGMMGAGKTTVGRELSNQLGYRFFDTDTLI-EQVASQTITQIFTDTGEEGFR 60
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPG-MVARM--DHSGF 207
+ E++VL ++S+ +L + G G V N + L HG+ +W+D P ++ R+ D++
Sbjct: 61 KLESQVLSEISAYTKLAIATGGGIVLKRENWSYLHHGLIVWLDAPVELLIERLAQDNTRP 120
Query: 208 PESEVLP--QLFALYKEMRDGYATADVTVSL 236
+V P +L L ++ + YA AD+ +S+
Sbjct: 121 LLQDVNPAEKLQKLLEQRQRLYAQADIKISI 151
>gi|307109411|gb|EFN57649.1| hypothetical protein CHLNCDRAFT_34609 [Chlorella variabilis]
Length = 263
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 75/121 (61%), Gaps = 1/121 (0%)
Query: 80 VKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAK 139
++ AA++ L+GTS+FLVGM + K+ +GK ++ AL Y +FD+D+L+ E + ++
Sbjct: 94 IEDTAAEVVEGLQGTSLFLVGMMGSGKSTVGKLISQALGYCFFDTDTLI-EQLSQKKVSE 152
Query: 140 AFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMV 199
F E E+ +++ ET+VL +LS VV G G + N ++ G+S+W++ PP ++
Sbjct: 153 IFAEDGEESFRELETQVLAELSPFKNCVVATGGGVPTKAENWGHMQGGVSVWLNGPPTLL 212
Query: 200 A 200
A
Sbjct: 213 A 213
>gi|126657832|ref|ZP_01728985.1| shikimate kinase [Cyanothece sp. CCY0110]
gi|126620772|gb|EAZ91488.1| shikimate kinase [Cyanothece sp. CCY0110]
Length = 188
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 83/149 (55%), Gaps = 6/149 (4%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
L+G +VFL+GM KT +GK LA L Y +FD+D L+ E +S F E+ ++
Sbjct: 7 LQGVNVFLIGMMGTGKTTVGKKLAQRLNYRFFDTDVLI-EKVTKQSITNIFATQGEETFR 65
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVARM--DHSGFP 208
E++VL +LSS + V+ G G V S N + L HG+ +W+D P ++ + ++ P
Sbjct: 66 DLESQVLSELSSCTKSVIATGGGIVLKSINWSYLHHGLIIWLDAPVSVLNKRLAKNTTRP 125
Query: 209 ---ESEVLPQLFALYKEMRDGYATADVTV 234
E+++ +L +L +E YA +D+ +
Sbjct: 126 LLQETDLQLKLQSLLEERHSLYAQSDLQI 154
>gi|434405733|ref|YP_007148618.1| shikimate kinase [Cylindrospermum stagnale PCC 7417]
gi|428259988|gb|AFZ25938.1| shikimate kinase [Cylindrospermum stagnale PCC 7417]
Length = 184
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 90/156 (57%), Gaps = 6/156 (3%)
Query: 87 ISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDE 146
+S+ LKG +++L+GM KT +G+ LA L Y + D+D+++ +AAG +S + F + E
Sbjct: 1 MSSLLKGVNLYLIGMMGVGKTTVGRLLAQQLGYGFVDTDNVIVQAAG-KSINELFADKGE 59
Query: 147 KGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMV-ARMDHS 205
++Q E++VL Q+ + +L + G G V N L HG+ +W+D P ++ AR+
Sbjct: 60 AAFRQLESDVLAQVCAFTKLTIATGGGIVLKRENWGYLHHGLIVWLDAPVELILARLAED 119
Query: 206 G----FPESEVLPQLFALYKEMRDGYATADVTVSLQ 237
+++ +L +L ++ + Y+ AD+ +++Q
Sbjct: 120 TTRPLLQDTDPQDKLRSLLEQRKPLYSQADLRITVQ 155
>gi|427714678|ref|YP_007063302.1| shikimate kinase [Synechococcus sp. PCC 6312]
gi|427378807|gb|AFY62759.1| shikimate kinase [Synechococcus sp. PCC 6312]
Length = 188
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 88/164 (53%), Gaps = 16/164 (9%)
Query: 83 KAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFR 142
+ + + L GT+++L+GM + KT G+ LA AL Y + D+D L+ E G+S ++ F
Sbjct: 6 QCSTLPHRLNGTNLYLIGMMGSGKTTTGQELAAALGYRFMDTDRLI-EQVAGQSVSEIFA 64
Query: 143 ESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVP-PGMVAR 201
++ E ++Q ET+VL ++S LVV G G + N + L HG+ +W+ V P +V R
Sbjct: 65 QAGEATFRQLETQVLAEVSCYHHLVVATGGGIILEPMNWSYLHHGLVIWLKVSIPNLVNR 124
Query: 202 ---------MDHSGFPESEVLPQLFALYKEMRDGYATADVTVSL 236
+ H+ E +L L + + YA AD+T+++
Sbjct: 125 LAGDTTRPLLAHAALAE-----KLTTLAQARNEFYAQADLTLTI 163
>gi|260435091|ref|ZP_05789061.1| shikimate kinase [Synechococcus sp. WH 8109]
gi|260412965|gb|EEX06261.1| shikimate kinase [Synechococcus sp. WH 8109]
Length = 191
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 81/158 (51%), Gaps = 15/158 (9%)
Query: 87 ISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDE 146
+ L G S++LVGM + KT G+ LA+ L Y + D+D+ V E A G S + F E
Sbjct: 8 LKERLAGRSIYLVGMMGSGKTSTGRPLAERLGYGFVDADA-VIEQAAGCSIPEIFDRDGE 66
Query: 147 KGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWID-VPPGMVARMD-- 203
G++ E++VL +S LVV G G V N +L GI +W+D VP ++ R++
Sbjct: 67 AGFRSLESQVLSAISQRHSLVVATGGGVVTQPENWGMLHSGIVIWLDVVPDQLLQRLNAD 126
Query: 204 -------HSGFPESEVLPQLFALYKEMRDGYATADVTV 234
+ PE+ L AL E R YA AD+TV
Sbjct: 127 STVRPLLQTADPEA----ALKALLNERRPLYAEADLTV 160
>gi|67922250|ref|ZP_00515764.1| Shikimate kinase [Crocosphaera watsonii WH 8501]
gi|416389334|ref|ZP_11685333.1| Shikimate kinase I (AroE I) [Crocosphaera watsonii WH 0003]
gi|67855953|gb|EAM51198.1| Shikimate kinase [Crocosphaera watsonii WH 8501]
gi|357264243|gb|EHJ13156.1| Shikimate kinase I (AroE I) [Crocosphaera watsonii WH 0003]
Length = 188
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 67/113 (59%), Gaps = 2/113 (1%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
L+G +VFLVGM KT +G+ LA L Y +FDSD LV E G++ F E+ ++
Sbjct: 7 LQGVNVFLVGMMGTGKTTVGQNLAQRLNYRFFDSDVLV-EKVTGQTINDIFATQGEETFR 65
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVP-PGMVARM 202
Q ET+VL +L+S + V+ G G+V N + L HG+ +W+DV P + R+
Sbjct: 66 QLETQVLSELASCTKSVIATGGGSVLKPKNWSYLHHGLIVWLDVSLPILTQRL 118
>gi|427718276|ref|YP_007066270.1| shikimate kinase [Calothrix sp. PCC 7507]
gi|427350712|gb|AFY33436.1| shikimate kinase [Calothrix sp. PCC 7507]
Length = 176
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 66/109 (60%), Gaps = 1/109 (0%)
Query: 87 ISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDE 146
+S+ LKG +++L+GM KT +G+ LA L Y + D+DS+V +AAG +S + F E E
Sbjct: 1 MSSLLKGVNLYLIGMMGTGKTTIGRLLAQQLSYGFVDTDSIVVQAAG-KSINQIFAELGE 59
Query: 147 KGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVP 195
++Q E++VL Q+ + +L + G G + N L HG+ +W+D P
Sbjct: 60 AAFRQLESDVLAQVCAYTKLTIATGGGIILQRENWGYLHHGLIVWLDAP 108
>gi|299473618|emb|CBN78012.1| Shikimate Kinase [Ectocarpus siliculosus]
Length = 224
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 97/181 (53%), Gaps = 18/181 (9%)
Query: 80 VKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADAL-RYYYFDSDSLVFEAAGGESAA 138
++ +AA++ + L+GT+VF VGM K+ + + LAD + RY + D+D+++ E G S
Sbjct: 16 LRLQAAELGSRLRGTNVFFVGMMGTGKSTVARALADVMGRYIFLDTDTIIEELLGA-SVG 74
Query: 139 KAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDV-PPG 197
+ F + E+G++ E++VL Q+ S ++ V G G V + N ++ G+ +W+D+ P
Sbjct: 75 EVFAKDGEEGFRSVESQVLDQVHSYVKMCVATGGGIVSENKNWGKMQTGMVVWLDMEPKD 134
Query: 198 MVARMDHSGFPESEVLPQLFA----------LYKEMRDGYATADVTVSLQKVASQLGYDD 247
+ R+ PE L A L ++ + YA ADVTV L+ + G DD
Sbjct: 135 IFERLSKD--PEEVAKRPLLAGDDPQGKLEELLEKRKPQYAQADVTVQLK---PEDGVDD 189
Query: 248 L 248
+
Sbjct: 190 I 190
>gi|168063482|ref|XP_001783700.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664765|gb|EDQ51472.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 168
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 83/157 (52%), Gaps = 12/157 (7%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVGM K+ +GK LADAL Y Y DSD + + GG + + FR E +++ E+
Sbjct: 11 NIFLVGMMGCGKSTVGKILADALGYKYRDSDDEIEKIEGGLAVKEIFRLKGETQFRKTES 70
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVAR-----------MD 203
+ L++L LVV G GAV AN L +GI++W+DVP ++A+ +
Sbjct: 71 DALRKLCEKKDLVVATGGGAVIYDANWEYLGNGITVWLDVPVKVLAKRVTAVGTGSRPLL 130
Query: 204 HSGFPESE-VLPQLFALYKEMRDGYATADVTVSLQKV 239
G + E VL +L L KE + Y+ A + + +
Sbjct: 131 GDGCADFESVLLKLSTLMKERKAQYSKAHCRLCFEGI 167
>gi|17228739|ref|NP_485287.1| shikimate kinase [Nostoc sp. PCC 7120]
gi|60389805|sp|Q8YXG9.1|AROK_ANASP RecName: Full=Shikimate kinase; Short=SK
gi|17130591|dbj|BAB73201.1| shikimate kinase [Nostoc sp. PCC 7120]
Length = 181
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 68/109 (62%), Gaps = 1/109 (0%)
Query: 87 ISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDE 146
+S+ L+G +++L+GM A KT +G LA L Y + D+D+++ +A +S + F E+ E
Sbjct: 1 MSSLLQGVNLYLIGMMGAGKTTVGHLLAKELGYGFLDTDNVIAQATK-KSINEIFAEAGE 59
Query: 147 KGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVP 195
G++Q E++VL Q+ S +L V G G V N + L HG+ LW+DVP
Sbjct: 60 AGFRQIESDVLAQVCSYTKLTVATGGGIVLRRENWSYLHHGLILWLDVP 108
>gi|317968056|ref|ZP_07969446.1| shikimate kinase [Synechococcus sp. CB0205]
Length = 207
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 81/154 (52%), Gaps = 7/154 (4%)
Query: 87 ISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDE 146
+ L+G +++LVGM + K+ +G+ LA+AL Y + D+D+ E G S + F E
Sbjct: 8 LRQRLEGLNLYLVGMMGSGKSSVGRHLAEALDYRFLDADT-SLEQVAGRSIPEIFASEGE 66
Query: 147 KGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPG-MVARMDHS 205
G++ E+ VL Q++S LVV G G V AN L G+ +W+D P ++AR++
Sbjct: 67 TGFRALESAVLNQIASWHSLVVATGGGVVTQPANWGELHQGVVIWLDAPDAILLARLEAD 126
Query: 206 GFPE-----SEVLPQLFALYKEMRDGYATADVTV 234
P + +L +L E R YA AD+ +
Sbjct: 127 PTPRPLMEAEDRAERLASLMAERRPLYAQADLQI 160
>gi|255087652|ref|XP_002505749.1| predicted protein [Micromonas sp. RCC299]
gi|226521019|gb|ACO67007.1| predicted protein [Micromonas sp. RCC299]
Length = 269
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 116/248 (46%), Gaps = 41/248 (16%)
Query: 38 PIRTSLQYSIISRKPRITTRSIADDTTSNTVTKVAAEDPSFAVKKKAADISTELKGTSVF 97
P RT ++ +R+ R+ R+ AD A ++ A ++ L G+S+F
Sbjct: 27 PART---RALPARRARVVPRASADG----------------AAEEVAKEVKEALDGSSLF 67
Query: 98 LVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEVL 157
LVGM K+ +GK LA +L Y +FD+D V E + + F ES E G+++ ET+VL
Sbjct: 68 LVGMMGTGKSSVGKKLAASLGYSFFDTDE-VIEQVTKTTIPEIFAESGEDGFREIETQVL 126
Query: 158 KQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMV-ARMDHSGFPESEVLP-- 214
++++ + VV G G V+ AN LR+G+ L + P ++ AR+ G +E P
Sbjct: 127 AEIAAYKKCVVATGGGVVKKKANWMHLRNGVVLCLTGTPTLLAARITRDG---AETRPLF 183
Query: 215 ------------QLFALYKEMRDGYATADVTVSLQKVASQLGYDDLDAVTTEDMTLEVKW 262
++ + KE YA ADV V L A G ++ T +++ + +
Sbjct: 184 KDVGDDVDAIAAKVEEMMKERAPMYANADVQVRL---AEADGAPGVEGETLDELNVRIMR 240
Query: 263 LYNASISD 270
I D
Sbjct: 241 CVRKRIED 248
>gi|428769981|ref|YP_007161771.1| shikimate kinase [Cyanobacterium aponinum PCC 10605]
gi|428684260|gb|AFZ53727.1| shikimate kinase [Cyanobacterium aponinum PCC 10605]
Length = 183
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 89/153 (58%), Gaps = 6/153 (3%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
LKG +++L+GM + KT +G+ LA L Y + D+D+++ A +S + F E E ++
Sbjct: 5 LKGLNIYLIGMMGSGKTTVGELLAKELEYRFLDTDAII-SAVSEKSINQIFAEDGEDEFR 63
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPG-MVARM-DHSGFP 208
Q E++VL+++S+ V+ G G + N + LR G+ +W++VP +V R+ D P
Sbjct: 64 QLESDVLQEVSAYLYTVIATGGGIILRQQNWSHLRDGMVVWLNVPIDVLVQRLKDDDTRP 123
Query: 209 ---ESEVLPQLFALYKEMRDGYATADVTVSLQK 238
E+ +L +LY++ + Y AD+T+ +++
Sbjct: 124 LLKREELQTKLTSLYEQRKSLYQQADITIGIEE 156
>gi|376003244|ref|ZP_09781058.1| shikimate kinase I [Arthrospira sp. PCC 8005]
gi|375328404|emb|CCE16811.1| shikimate kinase I [Arthrospira sp. PCC 8005]
Length = 194
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 66/106 (62%), Gaps = 1/106 (0%)
Query: 90 ELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGY 149
+++G +++L+GM A K+ +G+ LA+ L Y +FD+D L+ + AG ++ + F E+ +
Sbjct: 15 QIQGINIYLIGMMGAGKSTVGQILANRLSYKFFDTDVLISQVAG-QAIPEIFATQGEEEF 73
Query: 150 QQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVP 195
+ E++VL L + LVV G G V N + LRHGI +W+DVP
Sbjct: 74 RNLESQVLSSLCAYQHLVVATGGGVVIKRTNWSYLRHGIIVWLDVP 119
>gi|209527294|ref|ZP_03275804.1| Shikimate kinase [Arthrospira maxima CS-328]
gi|423066193|ref|ZP_17054983.1| shikimate kinase [Arthrospira platensis C1]
gi|209492282|gb|EDZ92627.1| Shikimate kinase [Arthrospira maxima CS-328]
gi|406712235|gb|EKD07424.1| shikimate kinase [Arthrospira platensis C1]
Length = 194
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 66/106 (62%), Gaps = 1/106 (0%)
Query: 90 ELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGY 149
+++G +++L+GM A K+ +G+ LA+ L Y +FD+D L+ + AG ++ + F E+ +
Sbjct: 15 QIQGINIYLIGMMGAGKSTVGQILANRLSYKFFDTDVLISQVAG-QAIPEIFATQGEEEF 73
Query: 150 QQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVP 195
+ E++VL L + LVV G G V N + LRHGI +W+DVP
Sbjct: 74 RNLESQVLSSLCAYQHLVVATGGGVVIKRMNWSYLRHGIIVWLDVP 119
>gi|427707062|ref|YP_007049439.1| shikimate kinase [Nostoc sp. PCC 7107]
gi|427359567|gb|AFY42289.1| shikimate kinase [Nostoc sp. PCC 7107]
Length = 186
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 66/109 (60%), Gaps = 1/109 (0%)
Query: 87 ISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDE 146
+S+ L+G S++L+GM A KT +G+ LA L Y + D+D ++ +A G S + F E E
Sbjct: 1 MSSLLQGVSLYLIGMMGAGKTTVGRLLAPQLGYRFVDTDDVIAKATG-RSITQLFAEEGE 59
Query: 147 KGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVP 195
++Q E++VL Q+S+ L V G G V N LRHG+ +W+D+P
Sbjct: 60 AAFRQLESDVLAQVSAHINLTVATGGGIVVRRENWGYLRHGLIVWLDLP 108
>gi|443316765|ref|ZP_21046197.1| shikimate kinase [Leptolyngbya sp. PCC 6406]
gi|442783620|gb|ELR93528.1| shikimate kinase [Leptolyngbya sp. PCC 6406]
Length = 221
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 62/105 (59%), Gaps = 1/105 (0%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
L+ S++LVGM A K+ LGK LA L+Y +FD+D+L+ E S F E+ E ++
Sbjct: 35 LRNVSLYLVGMMGAGKSTLGKRLAAVLKYRFFDTDTLI-EQTAQRSIGDIFAEAGESTFR 93
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVP 195
ET V+++L+ R+VV G G V N LR G+ +W+DVP
Sbjct: 94 DLETAVIRELAPYTRIVVSTGGGMVLRRENWGHLRQGVVVWVDVP 138
>gi|218245814|ref|YP_002371185.1| shikimate kinase [Cyanothece sp. PCC 8801]
gi|226729123|sp|B7JZT6.1|AROK_CYAP8 RecName: Full=Shikimate kinase; Short=SK
gi|218166292|gb|ACK65029.1| Shikimate kinase [Cyanothece sp. PCC 8801]
Length = 187
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 86/153 (56%), Gaps = 6/153 (3%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
L+G +++L+GM + K+ +GK LA L Y +FD+D L+ E +S F E ++
Sbjct: 7 LQGINIYLIGMMGSGKSTIGKILAQRLDYRFFDTDILI-ERVTQQSINDIFVTQGETVFR 65
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMV-ARMDHSG--- 206
ET+VL ++++ R V+ G G V +S N + L HG+ +W+DV ++ R+ +
Sbjct: 66 DIETQVLSEVAACTRSVIATGGGIVLNSQNWSYLHHGLIIWLDVSIKLLKTRLINDTTRP 125
Query: 207 -FPESEVLPQLFALYKEMRDGYATADVTVSLQK 238
ES++ +L L ++ R+ Y AD+T+ + +
Sbjct: 126 LLKESDLTLKLKTLDEQRRNLYNKADLTIVINQ 158
>gi|291569159|dbj|BAI91431.1| shikimate kinase [Arthrospira platensis NIES-39]
Length = 184
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 66/106 (62%), Gaps = 1/106 (0%)
Query: 90 ELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGY 149
+++G +++L+GM A K+ +G+ LA+ L Y +FD+D L+ + +G ++ + F E+ +
Sbjct: 5 QIQGINIYLIGMMGAGKSTVGEILANRLSYKFFDTDVLISQVSG-QAIPEIFSTQGEEEF 63
Query: 150 QQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVP 195
+ E++VL L + LVV G G V N + LRHGI +W+DVP
Sbjct: 64 RNLESQVLSSLCAYQHLVVATGGGVVIKRMNWSYLRHGIIVWLDVP 109
>gi|354568276|ref|ZP_08987441.1| Shikimate kinase [Fischerella sp. JSC-11]
gi|353540639|gb|EHC10112.1| Shikimate kinase [Fischerella sp. JSC-11]
Length = 181
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 67/108 (62%), Gaps = 1/108 (0%)
Query: 87 ISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDE 146
++ L+G +++L+GM A K+ LG+ LA L Y + D+D+L+ E A G++ + F E E
Sbjct: 5 LNERLQGINLYLIGMMGAGKSTLGRMLAYELGYGFVDTDNLL-EKAAGKTINQLFTEEGE 63
Query: 147 KGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDV 194
++Q E+EVL Q+ + +LV+ G G V N + L HGI +W+DV
Sbjct: 64 AAFRQLESEVLAQVCAFTKLVIATGGGIVLRRDNWSYLHHGIIIWLDV 111
>gi|78213853|ref|YP_382632.1| shikimate kinase [Synechococcus sp. CC9605]
gi|124053406|sp|Q3AH55.1|AROK_SYNSC RecName: Full=Shikimate kinase; Short=SK
gi|78198312|gb|ABB36077.1| Shikimate kinase [Synechococcus sp. CC9605]
Length = 199
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 81/158 (51%), Gaps = 15/158 (9%)
Query: 87 ISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDE 146
+ L G S++LVGM + KT G+ LA+ L Y + D+D+ V E A G S + F +
Sbjct: 16 LKKRLSGRSLYLVGMMGSGKTSTGRPLAERLGYGFVDADA-VIEQAAGCSIPEIFERDGD 74
Query: 147 KGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWID-VPPGMVARMDHS 205
G++ E++VL +S LVV G G V N LL GI +W+D VP ++ R++
Sbjct: 75 AGFRSLESQVLSAISQRHSLVVATGGGVVTQPENWGLLHSGIVIWLDVVPDQLLQRLNA- 133
Query: 206 GFPESEVLP---------QLFALYKEMRDGYATADVTV 234
+S V P L AL E R Y+ AD+TV
Sbjct: 134 ---DSTVRPLLQTTDPEASLNALLNERRPLYSEADLTV 168
>gi|409989186|ref|ZP_11272878.1| shikimate kinase [Arthrospira platensis str. Paraca]
gi|409939933|gb|EKN80923.1| shikimate kinase [Arthrospira platensis str. Paraca]
Length = 204
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 66/106 (62%), Gaps = 1/106 (0%)
Query: 90 ELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGY 149
+++G +++L+GM A K+ +G+ LA+ L Y +FD+D L+ + +G ++ + F E+ +
Sbjct: 25 QIQGINIYLIGMMGAGKSTVGEILANRLSYKFFDTDVLISQVSG-QAIPEIFSTQGEEEF 83
Query: 150 QQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVP 195
+ E++VL L + LVV G G V N + LRHGI +W+DVP
Sbjct: 84 RNLESQVLSSLCAYQHLVVATGGGVVIKRMNWSYLRHGIIVWLDVP 129
>gi|428201800|ref|YP_007080389.1| shikimate kinase [Pleurocapsa sp. PCC 7327]
gi|427979232|gb|AFY76832.1| shikimate kinase [Pleurocapsa sp. PCC 7327]
Length = 185
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 63/105 (60%), Gaps = 1/105 (0%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
L+G SVFLVG+ KT +G+ LA L Y +FD+D L+ E G++ + F E+ ++
Sbjct: 5 LQGVSVFLVGIMGTGKTTVGQILAQQLGYRFFDTDVLI-ERVAGQTINEIFARQGEERFR 63
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVP 195
+ ET+VL +LS+ + V+ G G V N + L HG+ +W+D P
Sbjct: 64 ELETQVLAELSAYTKSVIATGGGIVMRPINWSYLHHGLIVWLDAP 108
>gi|218438870|ref|YP_002377199.1| shikimate kinase [Cyanothece sp. PCC 7424]
gi|218171598|gb|ACK70331.1| Shikimate kinase [Cyanothece sp. PCC 7424]
Length = 184
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 69/115 (60%), Gaps = 1/115 (0%)
Query: 87 ISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDE 146
+S LKG S+FLVG+ KT +G+ LA+ L Y +FDSD +V + G++ + F E
Sbjct: 1 MSNLLKGLSIFLVGLPGTGKTTVGQGLAEQLDYRFFDSD-VVIKKVTGQTIKEIFATQGE 59
Query: 147 KGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVAR 201
+++ E++VL++L + R V+ G G + N + LRHG+ +W+D P ++ +
Sbjct: 60 DFFRELESQVLRELCAYTRSVIATGGGIILKQINWSYLRHGLIIWLDAPVDLLIQ 114
>gi|427416801|ref|ZP_18906984.1| shikimate kinase [Leptolyngbya sp. PCC 7375]
gi|425759514|gb|EKV00367.1| shikimate kinase [Leptolyngbya sp. PCC 7375]
Length = 188
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 85/157 (54%), Gaps = 7/157 (4%)
Query: 87 ISTEL-KGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESD 145
++TEL KGT+++LVGM + KT +GK LA L Y + D+D ++ +A G+S F
Sbjct: 1 MTTELLKGTNLYLVGMMGSGKTTIGKHLAKLLNYRFIDTDDVIVQAT-GQSINDIFAAQG 59
Query: 146 EKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPG-MVARMDH 204
E ++ ET+VL Q++ V+ G G V N + L+ G+ +WI+V ++AR+
Sbjct: 60 EAAFRDIETQVLGQVAPYTHTVIATGGGMVIKQQNWSYLQSGLVVWINVAVDELIARLSR 119
Query: 205 SG----FPESEVLPQLFALYKEMRDGYATADVTVSLQ 237
E ++ +L L ++ + YA AD TV Q
Sbjct: 120 DKSRPLLKEGDLRHKLTTLLEQRQARYAQADATVVYQ 156
>gi|298490902|ref|YP_003721079.1| shikimate kinase ['Nostoc azollae' 0708]
gi|298232820|gb|ADI63956.1| Shikimate kinase ['Nostoc azollae' 0708]
Length = 181
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 85/153 (55%), Gaps = 10/153 (6%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
LKG +++L GM KT +G LA L Y + D+D ++ +AAG +S + F E E ++
Sbjct: 5 LKGVNLYLTGMMGVGKTTVGHLLAHQLGYGFIDTDDVIVKAAG-KSINEIFTEEGEAAFR 63
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVARMDHSGFPES 210
Q E++VL Q+ + +L + G G V N +RHG+ +W+D P ++ ++ G ++
Sbjct: 64 QLESDVLGQVCAYTKLTIATGGGIVLRRENWGYMRHGLIVWLDAPVQIL--LNRLGEDDT 121
Query: 211 EVLPQ-------LFALYKEMRDGYATADVTVSL 236
L Q L++L ++ + Y+ AD+ +++
Sbjct: 122 RPLLQDSDPEGKLYSLLQQRQPLYSQADLHITI 154
>gi|115448691|ref|NP_001048125.1| Os02g0749300 [Oryza sativa Japonica Group]
gi|113537656|dbj|BAF10039.1| Os02g0749300 [Oryza sativa Japonica Group]
Length = 195
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 75/136 (55%), Gaps = 6/136 (4%)
Query: 53 RITTRSIADDTTSNTVTKVAAEDPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKF 112
R S +T N+V D + +K+K+ ++ L G ++LVGM + K+ +GK
Sbjct: 62 RAKKSSGGHETLHNSV------DEALLLKRKSEEVLFYLNGRCIYLVGMMGSGKSTVGKI 115
Query: 113 LADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGN 172
+++ L Y +FDSD LV +A G S A+ F+ E ++ E+ VL+ LSSM RLVV G
Sbjct: 116 MSEVLGYSFFDSDKLVEQAVGMPSVAQIFKVHSEAFFRDNESSVLRDLSSMKRLVVATGG 175
Query: 173 GAVQSSANLALLRHGI 188
GAV N ++ G+
Sbjct: 176 GAVIRPVNWKYMKKGL 191
>gi|172036297|ref|YP_001802798.1| shikimate kinase [Cyanothece sp. ATCC 51142]
gi|354553090|ref|ZP_08972397.1| Shikimate kinase [Cyanothece sp. ATCC 51472]
gi|171697751|gb|ACB50732.1| shikimate kinase [Cyanothece sp. ATCC 51142]
gi|353554920|gb|EHC24309.1| Shikimate kinase [Cyanothece sp. ATCC 51472]
Length = 189
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 81/149 (54%), Gaps = 6/149 (4%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
L+G +VFL+GM KT +G+ LA L Y +FDSD L+ E + + F E+ ++
Sbjct: 8 LQGVNVFLIGMMGTGKTTVGQKLAQRLNYRFFDSDVLI-ERVTQQRISDIFATQGEETFR 66
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVP-PGMVARMDHSG--- 206
+ E++VL +L+S + V+ G G + N + L HG+ +W+D P P + R+
Sbjct: 67 ELESQVLSELASCTKSVIATGGGIILKPINWSYLHHGLIVWLDAPVPILTKRLKKDKTRP 126
Query: 207 -FPESEVLPQLFALYKEMRDGYATADVTV 234
++++ +L +L +E R YA D+ +
Sbjct: 127 LLQQTDLSLKLQSLLEERRYLYAQCDLQI 155
>gi|33239580|ref|NP_874522.1| shikimate kinase [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
gi|81665111|sp|Q7VE85.1|AROK_PROMA RecName: Full=Shikimate kinase; Short=SK
gi|33237105|gb|AAP99174.1| Shikimate kinase [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
Length = 190
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 83/165 (50%), Gaps = 8/165 (4%)
Query: 81 KKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKA 140
K + + +L G ++LVGM + K+ G LA L+Y + D D L+ E S ++
Sbjct: 4 KLRPNQVIKKLGGRIIYLVGMMGSGKSTTGPHLAKLLKYSFIDQDELI-EKVAKSSVSQI 62
Query: 141 FRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMV- 199
FRE E G++ ET+VLKQ+ LVV G G V S N +L GI +W+D ++
Sbjct: 63 FREEGENGFRDIETQVLKQIGQRHSLVVATGGGLVTRSENWGVLHQGIVIWLDPNRELLF 122
Query: 200 ARMDHSGFPESEVLPQ------LFALYKEMRDGYATADVTVSLQK 238
AR+ +L L +L K+ YA AD+ +S+++
Sbjct: 123 ARLKSDKTVVRPLLDNKDPKDVLDSLIKQRYLSYAEADLHISIER 167
>gi|75906776|ref|YP_321072.1| shikimate kinase [Anabaena variabilis ATCC 29413]
gi|115312135|sp|Q3MFQ9.1|AROK_ANAVT RecName: Full=Shikimate kinase; Short=SK
gi|75700501|gb|ABA20177.1| shikimate kinase [Anabaena variabilis ATCC 29413]
Length = 181
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 68/108 (62%), Gaps = 1/108 (0%)
Query: 87 ISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDE 146
+S+ L+G +++L+GM A KT +G LA L Y + D+D+++ +AA +S + F E+ E
Sbjct: 1 MSSLLQGVNLYLIGMMGAGKTTVGHLLAQELGYGFLDTDNVIAQAAK-KSINEIFAEAGE 59
Query: 147 KGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDV 194
G++Q E++VL Q+ S +L V G G V N + L HG+ +W+DV
Sbjct: 60 AGFRQIESDVLAQVCSYTKLTVATGGGIVLRRENWSYLHHGLIVWLDV 107
>gi|33866734|ref|NP_898293.1| shikimate kinase [Synechococcus sp. WH 8102]
gi|81573829|sp|Q7U469.1|AROK_SYNPX RecName: Full=Shikimate kinase; Short=SK
gi|33639335|emb|CAE08717.1| Shikimate kinase [Synechococcus sp. WH 8102]
Length = 191
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 80/161 (49%), Gaps = 13/161 (8%)
Query: 87 ISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDE 146
+ L G S++LVGM + KT G+ LA+ L Y + D+D+ V E A G S + F E
Sbjct: 8 LKQRLGGRSLYLVGMMGSGKTSTGRPLAEQLGYGFVDADA-VIEQAAGCSIPEIFERDGE 66
Query: 147 KGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVARMDHSG 206
G++ E++VL + LVV G G V N LL GI +W+DV P + + +
Sbjct: 67 AGFRALESQVLNAIGQRHSLVVATGGGVVTQQENWGLLHSGIVVWLDVVPEQLMQRLRA- 125
Query: 207 FPESEVLP---------QLFALYKEMRDGYATADVTVSLQK 238
+S V P L AL + R YA AD+TV + +
Sbjct: 126 --DSTVRPLLQTEDPDAALNALLNQRRPLYAEADLTVVINQ 164
>gi|257058860|ref|YP_003136748.1| shikimate kinase [Cyanothece sp. PCC 8802]
gi|256589026|gb|ACU99912.1| Shikimate kinase [Cyanothece sp. PCC 8802]
Length = 187
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 86/153 (56%), Gaps = 6/153 (3%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
L+G +++L+GM + K+ +GK LA L Y +FD+D L+ E +S F E ++
Sbjct: 7 LQGINIYLIGMMGSGKSTIGKILAQRLDYRFFDTDILI-ERVTQQSINDIFVTQGETVFR 65
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMV-ARMDHSG--- 206
ET+VL ++++ R V+ G G V +S N + L HG+ +W+DV ++ R+ +
Sbjct: 66 DIETQVLSEVAACTRSVIATGGGIVLNSQNWSYLHHGLIIWLDVSIKLLKTRLINDTTRP 125
Query: 207 -FPESEVLPQLFALYKEMRDGYATADVTVSLQK 238
ES++ +L L ++ R+ Y AD+++ + +
Sbjct: 126 LLKESDLTLKLKTLDEQRRNLYNKADLSIVINQ 158
>gi|384246912|gb|EIE20400.1| SKI-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 235
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 76/124 (61%), Gaps = 1/124 (0%)
Query: 78 FAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESA 137
F K AA++ L+GTS++LVGM + K+ +GK LA AL+Y Y D D+L+ E G S
Sbjct: 23 FLAKALAAEVMELLEGTSLYLVGMMGSGKSTVGKILASALKYPYLDCDTLI-EKMAGCSV 81
Query: 138 AKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPG 197
A+ F E E+ +++ E++VL +L +VV G G V S N ++HG+ +W+ PP
Sbjct: 82 AEIFSEEGEESFRELESQVLHELMPFKAVVVSTGGGVVVSKQNWGYMQHGVVIWLTGPPE 141
Query: 198 MVAR 201
+++R
Sbjct: 142 LLSR 145
>gi|33860667|ref|NP_892228.1| shikimate kinase [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
gi|33633609|emb|CAE18566.1| Shikimate kinase [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
Length = 185
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 87/166 (52%), Gaps = 12/166 (7%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
++G S++L+GM + K+ G LA+ LRY Y D D L+ E ++ + F+E EK ++
Sbjct: 13 IQGRSIYLIGMMASGKSKTGPVLAELLRYKYIDLDKLI-ENIAKKTINEMFQEDGEKAFR 71
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVAR-----MDHS 205
+ ET LK+ + L+V G G + N +LR GI +WID + +++
Sbjct: 72 ELETNCLKETIKIPSLIVSTGGGIISKPENWGVLRQGIIIWIDTKQEIALERLKKDIENR 131
Query: 206 GFPESEVLPQLF-ALYKEMRDGYATADVTVS-----LQKVASQLGY 245
+ E L L+ +++ ++ Y+ AD+ V +++VA Q+ Y
Sbjct: 132 PLLQGEDLSDLYNQIFQSRKNLYSQADLRVEVNNEDVEEVAKQIVY 177
>gi|428209800|ref|YP_007094153.1| shikimate kinase [Chroococcidiopsis thermalis PCC 7203]
gi|428011721|gb|AFY90284.1| shikimate kinase [Chroococcidiopsis thermalis PCC 7203]
Length = 185
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 82/150 (54%), Gaps = 6/150 (4%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
LKG +++LVGM A KT +GK LA L Y + D+D+ V E +S + F E E ++
Sbjct: 7 LKGINLYLVGMMGAGKTTIGKILAAQLGYGFVDTDA-VIEQLTQKSINQIFAEKGETTFR 65
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVP-PGMVARMDHSG--- 206
Q ET+VL ++ + RL + G G V N + L +G+ +W+DVP + +R+
Sbjct: 66 QIETKVLSEVCAYTRLAISTGGGIVLRRENWSYLHYGLIVWLDVPVEQLYSRLAEDNTRP 125
Query: 207 -FPESEVLPQLFALYKEMRDGYATADVTVS 235
+ + + +L +L E R YA AD+ ++
Sbjct: 126 LLQDPDPIGKLRSLLDERRSLYAEADLHIT 155
>gi|123965355|ref|YP_001010436.1| shikimate kinase [Prochlorococcus marinus str. MIT 9515]
gi|123199721|gb|ABM71329.1| Shikimate kinase [Prochlorococcus marinus str. MIT 9515]
Length = 185
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 88/166 (53%), Gaps = 12/166 (7%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
+KG S+FL+GM + K+ G LA LRY Y D D L+ E ++ + F E E+ ++
Sbjct: 13 IKGRSIFLIGMMASGKSQTGPVLAKFLRYKYIDLDKLI-EKIVKKTIIEMFHEDGEEKFR 71
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVAR-----MDHS 205
+ ET LK+ + LV+ G G + N +LR GI +WID + +D+
Sbjct: 72 ELETNCLKETIKIPSLVISTGGGVIAKPENWGILRQGIIIWIDTKQEIALERLQNDIDNR 131
Query: 206 GFPESEVLPQLFA-LYKEMRDGYATADVTV-----SLQKVASQLGY 245
+ + L +L++ +++ ++ Y+ AD+ V ++++VA ++ Y
Sbjct: 132 PLLQGKDLKELYSRIFQSRKNLYSQADLRVEVDNENVEEVAKKIIY 177
>gi|384247569|gb|EIE21055.1| shikimate kinase, partial [Coccomyxa subellipsoidea C-169]
Length = 178
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 68/111 (61%), Gaps = 1/111 (0%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
L G+S++LVGM + K+ +GK +A AL Y Y DSD L+ E AG + A+ F E+ ++
Sbjct: 1 LDGSSLYLVGMMGSGKSTVGKMVAAALEYPYVDSDKLIEERAGC-TVAQIFAAQGEQAFR 59
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVAR 201
E+ VL++L++ ++V G G V N +RHG+ +W+ PP ++A+
Sbjct: 60 DLESSVLQELAASKAVMVSTGGGVVTREQNWESMRHGLVIWLTGPPELLAK 110
>gi|303289006|ref|XP_003063791.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454859|gb|EEH52164.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 167
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 88/163 (53%), Gaps = 14/163 (8%)
Query: 87 ISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDE 146
++ L G+SVFLVGM K+ +GK LA L Y +FD+D ++ E+ + + F E E
Sbjct: 1 VADALDGSSVFLVGMMGTGKSSVGKKLAAELGYNFFDTDEII-ESVTKMTIPEIFAEEGE 59
Query: 147 KGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVAR--MDH 204
G+++ ET++L +++S + VV G G V+ AN LR+GI L + ++AR D
Sbjct: 60 DGFREIETQILAEIASYKKCVVATGGGIVKRKANWMHLRNGIVLCLSGSAKLLARRVADA 119
Query: 205 SG------FPESE-----VLPQLFALYKEMRDGYATADVTVSL 236
G F + + + ++ + KE + YA AD++V L
Sbjct: 120 DGGASRPLFKDCDGDVDKIAEKIQEMMKERAEMYANADISVQL 162
>gi|186686317|ref|YP_001869513.1| shikimate kinase [Nostoc punctiforme PCC 73102]
gi|238691206|sp|B2IX35.1|AROK_NOSP7 RecName: Full=Shikimate kinase; Short=SK
gi|186468769|gb|ACC84570.1| shikimate kinase [Nostoc punctiforme PCC 73102]
Length = 181
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 89/157 (56%), Gaps = 6/157 (3%)
Query: 87 ISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDE 146
+S+ L+G +++L+GM KT +G LA L Y + D D ++ +A +S + F E E
Sbjct: 1 MSSLLQGVNLYLIGMMGVGKTTVGPLLAKHLGYGFLDLDGVIAKATD-KSINQLFAEEGE 59
Query: 147 KGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVARM--DH 204
G++Q E++VL Q+ + +L + G G V N L HG+ +W+DVP ++ R +
Sbjct: 60 AGFRQIESDVLSQVCAFTKLTIATGGGIVLRRENWGYLHHGLIVWLDVPVELIYRRLAED 119
Query: 205 SGFP---ESEVLPQLFALYKEMRDGYATADVTVSLQK 238
+ P ++++ +L +L ++ Y+ AD+ +++Q+
Sbjct: 120 TTRPLLQDADLKGKLRSLLEQRTPLYSQADLHITVQE 156
>gi|284929680|ref|YP_003422202.1| shikimate kinase [cyanobacterium UCYN-A]
gi|284810124|gb|ADB95821.1| shikimate kinase [cyanobacterium UCYN-A]
Length = 183
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 80/145 (55%), Gaps = 14/145 (9%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
L+G ++FL+GM + KT GK LA+ L Y +FD+D+L+ + ++ + F E E+ ++
Sbjct: 6 LQGINIFLIGMMGSGKTTTGKRLAEHLNYRFFDTDTLI-KQVKQKTISDIFVEEGEESFR 64
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVP-PGMVARMDH--SGF 207
E+ VL +L+S R V+ G G V N + L HG+ +W+D P + R++H S
Sbjct: 65 ILESNVLSELASCTRSVIATGGGIVLKQENWSYLHHGLIIWLDTSIPILKKRLNHDLSSR 124
Query: 208 P---------ESE-VLPQLFALYKE 222
P E E +L Q ALYK+
Sbjct: 125 PLIQKEKLDIELELLLKQRHALYKQ 149
>gi|16329403|ref|NP_440131.1| shikimate kinase [Synechocystis sp. PCC 6803]
gi|383321144|ref|YP_005381997.1| shikimate kinase [Synechocystis sp. PCC 6803 substr. GT-I]
gi|383324314|ref|YP_005385167.1| shikimate kinase [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|383490198|ref|YP_005407874.1| shikimate kinase [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|384435464|ref|YP_005650188.1| shikimate kinase [Synechocystis sp. PCC 6803]
gi|451813562|ref|YP_007450014.1| shikimate kinase [Synechocystis sp. PCC 6803]
gi|2492976|sp|P72796.1|AROK_SYNY3 RecName: Full=Shikimate kinase; Short=SK
gi|1651884|dbj|BAA16811.1| shikimate kinase [Synechocystis sp. PCC 6803]
gi|339272496|dbj|BAK48983.1| shikimate kinase [Synechocystis sp. PCC 6803]
gi|359270463|dbj|BAL27982.1| shikimate kinase [Synechocystis sp. PCC 6803 substr. GT-I]
gi|359273634|dbj|BAL31152.1| shikimate kinase [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|359276804|dbj|BAL34321.1| shikimate kinase [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|407957278|dbj|BAM50518.1| shikimate kinase [Bacillus subtilis BEST7613]
gi|451779531|gb|AGF50500.1| shikimate kinase [Synechocystis sp. PCC 6803]
Length = 189
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 1/107 (0%)
Query: 87 ISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDE 146
I +L+G ++FL+GM + K+ +G LA+ L Y +FD+D L+ E G++ A F E E
Sbjct: 6 IKEQLQGVNLFLIGMMGSGKSTVGPLLAEQLGYRFFDADVLI-ERVAGKAIADIFAEDGE 64
Query: 147 KGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWID 193
++ ETEVL L++ R V+ G G V N + L HG+ +W+D
Sbjct: 65 DTFRDLETEVLGHLAAQTRSVIATGGGVVLRRQNWSYLHHGLVIWLD 111
>gi|282900529|ref|ZP_06308473.1| Shikimate kinase [Cylindrospermopsis raciborskii CS-505]
gi|281194582|gb|EFA69535.1| Shikimate kinase [Cylindrospermopsis raciborskii CS-505]
Length = 188
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 63/109 (57%), Gaps = 1/109 (0%)
Query: 87 ISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDE 146
I LKG +++L+GM + KT +G LA A+ Y + D+D ++ +AAG + + F E
Sbjct: 5 IKQLLKGVNLYLIGMMGSGKTTIGNLLAQAVNYSFIDTDEVIVKAAG-KPISDIFITEGE 63
Query: 147 KGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVP 195
++Q E+ VL Q+ + +L + G G V N + L HG+ +W+DVP
Sbjct: 64 PAFRQLESNVLAQVCAYTKLTIATGGGIVLRRENWSYLHHGLIIWLDVP 112
>gi|440682487|ref|YP_007157282.1| shikimate kinase [Anabaena cylindrica PCC 7122]
gi|428679606|gb|AFZ58372.1| shikimate kinase [Anabaena cylindrica PCC 7122]
Length = 184
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 65/109 (59%), Gaps = 1/109 (0%)
Query: 87 ISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDE 146
+S L+G +++L+GM KT +G+ LA L Y + D+D ++ +AAG +S + F + E
Sbjct: 1 MSNLLRGVNLYLIGMMGVGKTTVGRLLAKELGYGFLDTDDVIVKAAG-KSINEIFVDEGE 59
Query: 147 KGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVP 195
++Q E++VL Q+ + +L + G G V N LRHG+ +W+D P
Sbjct: 60 AEFRQLESDVLAQVCAYTKLTIATGGGIVLRRENWGYLRHGLIVWLDAP 108
>gi|427724186|ref|YP_007071463.1| shikimate kinase [Leptolyngbya sp. PCC 7376]
gi|427355906|gb|AFY38629.1| shikimate kinase [Leptolyngbya sp. PCC 7376]
Length = 186
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 82/152 (53%), Gaps = 6/152 (3%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
LKG +++L+GM K+ L K +A+ + Y DSD ++ E G S + F E E+ ++
Sbjct: 5 LKGLNIYLIGMMGTGKSTLAKIIAEIMNYRVLDSDDII-EQLAGTSISNIFAEMGEEEFR 63
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVP-PGMVARMDHSG--- 206
+ ET+VL +++ R VV G G + S+ N L+ G+++W+DVP P ++ R+
Sbjct: 64 KLETQVLGKIAVQTRTVVATGGGIILSNDNWYYLQQGLTIWLDVPTPLLMDRLRSDTRRP 123
Query: 207 -FPESEVLPQLFALYKEMRDGYATADVTVSLQ 237
++ +L L ++ R Y AD+ + +
Sbjct: 124 LLQNVDLETKLNELLEQRRSLYNEADLHIQIN 155
>gi|359458945|ref|ZP_09247508.1| shikimate kinase [Acaryochloris sp. CCMEE 5410]
Length = 182
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 64/106 (60%), Gaps = 1/106 (0%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
LKG +++LVGM K+ G+ LA L Y + D+D L+ + G ++ F ES E ++
Sbjct: 4 LKGVNLYLVGMMGCGKSTTGRALAQQLGYGFVDTDDLITQLTG-QAITDIFAESGEAHFR 62
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPP 196
Q E++VL ++++ +LVV G G V N + L+HG+ +W+DV P
Sbjct: 63 QVESKVLSEVAAHTKLVVATGGGIVLDKKNWSFLQHGLVIWLDVEP 108
>gi|428218974|ref|YP_007103439.1| shikimate kinase [Pseudanabaena sp. PCC 7367]
gi|427990756|gb|AFY71011.1| shikimate kinase [Pseudanabaena sp. PCC 7367]
Length = 196
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 84/155 (54%), Gaps = 7/155 (4%)
Query: 88 STELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEK 147
++ L+G ++FL+GM A K+ +GK A L Y++ D+D + E+ G+S + F +S E
Sbjct: 8 TSMLQGVNLFLIGMMGAGKSTVGKLAAQRLGYHFIDTDDTI-ESYAGKSIPQIFADSGEA 66
Query: 148 GYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVARM---DH 204
++Q E VL Q+S+ LVV G G V N A L G+ W+DVP ++ + ++
Sbjct: 67 EFRQIEHNVLMQVSAYRNLVVATGGGIVVDRQNWAHLHSGVVAWLDVPIEVLHQRLTKNN 126
Query: 205 SGFPESEV---LPQLFALYKEMRDGYATADVTVSL 236
P +V + +L LY + Y AD+ V++
Sbjct: 127 GKRPLLQVEDPMQRLTNLYNQRLSLYQQADIQVAI 161
>gi|434396920|ref|YP_007130924.1| shikimate kinase [Stanieria cyanosphaera PCC 7437]
gi|428268017|gb|AFZ33958.1| shikimate kinase [Stanieria cyanosphaera PCC 7437]
Length = 182
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 63/108 (58%), Gaps = 1/108 (0%)
Query: 87 ISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDE 146
I L G S++L+GM KT +GK LA L Y +FD+D L+ E +S + F ES E
Sbjct: 5 IEQSLHGISIYLIGMMGVGKTTIGKLLAHQLNYRFFDTDVLI-ERVTQQSIPEIFAESGE 63
Query: 147 KGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDV 194
+++ E +VL+++S + V+ G G V+ N + L+ G+ +W+DV
Sbjct: 64 DNFRELEHQVLQEISVETKSVIATGGGIVERQINWSYLQQGLIIWLDV 111
>gi|148240549|ref|YP_001225936.1| shikimate kinase [Synechococcus sp. WH 7803]
gi|147849088|emb|CAK24639.1| Shikimate kinase [Synechococcus sp. WH 7803]
Length = 191
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 77/156 (49%), Gaps = 7/156 (4%)
Query: 87 ISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDE 146
+ L G +++LVGM + KT G+ LA L Y + D+D+ V E A G + F+ E
Sbjct: 8 LRQRLGGRNLYLVGMMGSGKTSTGRPLAQRLEYGFVDADA-VIEQAAGCTIPDIFKREGE 66
Query: 147 KGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPG-MVARMDHS 205
G++ ET+VL +S LVV G GAV N + GI +W+DV ++ R++
Sbjct: 67 SGFRNLETQVLSAISQRHSLVVATGGGAVTRPENWGAMHQGIVIWLDVEQQRLLKRLESD 126
Query: 206 GFPESEVLPQ-----LFALYKEMRDGYATADVTVSL 236
P + Q L L R YA AD+TV +
Sbjct: 127 DTPRPLLHEQDPALALNTLLTARRPMYAEADLTVVI 162
>gi|427728049|ref|YP_007074286.1| shikimate kinase [Nostoc sp. PCC 7524]
gi|427363968|gb|AFY46689.1| shikimate kinase [Nostoc sp. PCC 7524]
Length = 183
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 68/109 (62%), Gaps = 1/109 (0%)
Query: 87 ISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDE 146
+S+ L+G +++L+GM A KT +G+ LA L Y + D+D+++ ++A +S + F E E
Sbjct: 1 MSSLLQGVNLYLIGMMGAGKTTVGQLLAKQLGYGFIDTDNVIAQSAK-KSINQIFAEEGE 59
Query: 147 KGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVP 195
++Q E++VL Q+ + +L V G G V N + L HG+ +W+DVP
Sbjct: 60 ATFRQLESDVLGQVCAYTKLTVATGGGIVLRRENWSYLHHGLIVWLDVP 108
>gi|428775242|ref|YP_007167029.1| shikimate kinase [Halothece sp. PCC 7418]
gi|428689521|gb|AFZ42815.1| shikimate kinase [Halothece sp. PCC 7418]
Length = 182
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 85/154 (55%), Gaps = 10/154 (6%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
L+G +++L+GM KT +G+ +A L Y +FD+D L+ G ++ + F ++ E ++
Sbjct: 10 LQGLNLYLIGMMGVGKTAVGQAVAQQLTYRFFDTDELITRVQG-QAITEIFAKAGEDYFR 68
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVARMDHSGFPES 210
+ ET+VL++LS+ R V+ G G + + N + L+ G+ +W+D ++ M+ +S
Sbjct: 69 ELETKVLQELSAYARSVIATGGGIILQNQNWSFLQQGLVVWLDADLDLI--MERLAEDQS 126
Query: 211 EVLPQ-------LFALYKEMRDGYATADVTVSLQ 237
L Q L L + RD YA AD+ + ++
Sbjct: 127 RPLLQTENPRQTLADLLDQRRDRYAQADLQIRVE 160
>gi|443324667|ref|ZP_21053405.1| shikimate kinase [Xenococcus sp. PCC 7305]
gi|442795735|gb|ELS05084.1| shikimate kinase [Xenococcus sp. PCC 7305]
Length = 187
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 63/106 (59%), Gaps = 1/106 (0%)
Query: 88 STELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEK 147
ST LKG +V+L+GM + K+ +GK LA L Y +FD+D L+ E ++ + F E
Sbjct: 15 STLLKGVNVYLIGMMGSGKSTIGKILAQKLNYRFFDTDVLI-EKVAQKTIPEIFATEGEA 73
Query: 148 GYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWID 193
++ ET+VL ++S+ V+ G G +Q + N + LR G+ +W+D
Sbjct: 74 YFRDLETKVLHEVSAYNHSVIATGGGMIQKTVNWSFLRQGLIVWLD 119
>gi|37522279|ref|NP_925656.1| shikimate kinase [Gloeobacter violaceus PCC 7421]
gi|81709329|sp|Q7NH27.1|AROK_GLOVI RecName: Full=Shikimate kinase; Short=SK
gi|35213279|dbj|BAC90651.1| shikimate kinase [Gloeobacter violaceus PCC 7421]
Length = 177
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 80/153 (52%), Gaps = 11/153 (7%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
LKG S++LVGM + K+ +G+ LA+ L Y + D D+L+ E G+ + F E ++
Sbjct: 2 LKGVSLYLVGMMGSGKSTVGRLLAEKLGYGFVDLDALI-EQVSGKRVGEIFEREGEAVFR 60
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVP-PGMVARMDHSGFPE 209
E+ VL ++S+ RLVV G G V + N L HG+ +W+D ++ R++H P
Sbjct: 61 DLESRVLAEVSAYTRLVVATGGGVVLARRNWGYLHHGVVVWLDADIETLLGRVEHE--PG 118
Query: 210 SEVL-------PQLFALYKEMRDGYATADVTVS 235
+ L +L L E YA ADV VS
Sbjct: 119 TRPLLAGGDRHLRLVELLGERARLYAQADVRVS 151
>gi|88807136|ref|ZP_01122648.1| shikimate kinase [Synechococcus sp. WH 7805]
gi|88788350|gb|EAR19505.1| shikimate kinase [Synechococcus sp. WH 7805]
Length = 191
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 79/156 (50%), Gaps = 7/156 (4%)
Query: 87 ISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDE 146
+ L G +++LVGM + KT G+ LA L+Y + D+D+ V E A G + + F+ E
Sbjct: 8 LRQRLGGRNLYLVGMMGSGKTSTGRPLAQRLQYGFVDADA-VIEQAAGCTIPEIFKRDGE 66
Query: 147 KGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVP-PGMVARMDHS 205
G++ ET+VL +S LVV G GAV N + GI +W+DV ++ R++
Sbjct: 67 SGFRSLETQVLSAISQRHSLVVATGGGAVTRPENWGAMHQGIVIWLDVERQQLLKRLEKD 126
Query: 206 GFPESEVLPQ-----LFALYKEMRDGYATADVTVSL 236
P + Q L L R Y+ AD+TV +
Sbjct: 127 DTPRPLLQEQDPAMALDRLLMTRRPMYSEADLTVVI 162
>gi|427734518|ref|YP_007054062.1| shikimate kinase [Rivularia sp. PCC 7116]
gi|427369559|gb|AFY53515.1| shikimate kinase [Rivularia sp. PCC 7116]
Length = 181
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 82/153 (53%), Gaps = 6/153 (3%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
L+G +++L+GM A KT +G+ LA L Y + D+D V A+ +S + F E ++
Sbjct: 5 LQGINLYLIGMMGAGKTTVGRLLASELEYGFVDTDE-VITASAKKSINQIFAAEGEAEFR 63
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVA-RMDHSG--- 206
+ E++VL Q+S+ RL V G G V N + L HG+ +W+D ++ R+
Sbjct: 64 KLESDVLSQVSAYTRLTVATGGGIVLKRQNWSYLHHGLIVWLDATAELLYDRLKEDTTRP 123
Query: 207 -FPESEVLPQLFALYKEMRDGYATADVTVSLQK 238
ES L +L L +E YA AD+ +++++
Sbjct: 124 LLKESNPLLKLRNLLEERESLYALADLRITIKE 156
>gi|282898123|ref|ZP_06306118.1| Shikimate kinase [Raphidiopsis brookii D9]
gi|281197267|gb|EFA72168.1| Shikimate kinase [Raphidiopsis brookii D9]
Length = 167
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 63/110 (57%), Gaps = 1/110 (0%)
Query: 85 ADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRES 144
A I LKG +++L+GM + KT +G LA A+ Y + D+D ++ +AAG + + F
Sbjct: 3 ASIKQSLKGVNLYLIGMMGSGKTTIGSLLAQAVNYSFIDTDEVIVKAAG-KPISDIFTTE 61
Query: 145 DEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDV 194
E ++Q E+ VL Q+ + +L + G G V N + L HG+ +W+DV
Sbjct: 62 GETAFRQLESNVLAQVCAYTKLTIATGGGIVLRRENWSYLHHGLIIWLDV 111
>gi|157412463|ref|YP_001483329.1| shikimate kinase [Prochlorococcus marinus str. MIT 9215]
gi|157387038|gb|ABV49743.1| Shikimate kinase [Prochlorococcus marinus str. MIT 9215]
Length = 185
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 84/154 (54%), Gaps = 7/154 (4%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
+KG S+FL+GM + K+ G LA+ L+Y Y D D+L+ E +S + F++ E ++
Sbjct: 13 IKGRSIFLIGMMGSGKSQTGLKLAELLKYKYIDLDTLI-EKLAKKSINQIFKDEGEDNFR 71
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGM-VARM----DHS 205
+ E LK+ + LV+ G G V S N +LR GI WID+ + + R+ ++
Sbjct: 72 ELEANCLKETIKIPSLVISTGGGIVTKSENWGILRQGIIAWIDLEKDIAIERLKNEIENR 131
Query: 206 GFPESEVLPQLF-ALYKEMRDGYATADVTVSLQK 238
+ + L L+ ++++ + Y+ AD+ + ++K
Sbjct: 132 PLLQGKNLNDLYMSIFQSRENLYSQADLRIQVKK 165
>gi|302830073|ref|XP_002946603.1| hypothetical protein VOLCADRAFT_86714 [Volvox carteri f.
nagariensis]
gi|300268349|gb|EFJ52530.1| hypothetical protein VOLCADRAFT_86714 [Volvox carteri f.
nagariensis]
Length = 352
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 74/122 (60%)
Query: 80 VKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAK 139
VK+ +++ +L+G +++L+GM + K+ +GK L++ L+Y +FD+DS++ A + ++
Sbjct: 95 VKEVTDELTKDLRGCNIWLIGMMGSGKSTVGKMLSNTLKYAFFDTDSVIELAHDKKPVSQ 154
Query: 140 AFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMV 199
F E ++ ++ E++++K+LS LV+ G GAV N + GI W++ ++
Sbjct: 155 IFAEEGQEYFRNCESQIIKELSPYRNLVIATGGGAVLRPENWGYMHLGIVCWLNGDVDLL 214
Query: 200 AR 201
AR
Sbjct: 215 AR 216
>gi|428779039|ref|YP_007170825.1| shikimate kinase [Dactylococcopsis salina PCC 8305]
gi|428693318|gb|AFZ49468.1| shikimate kinase [Dactylococcopsis salina PCC 8305]
Length = 186
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 84/156 (53%), Gaps = 6/156 (3%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
L+G +++LVG+ KT +GK +A L Y +FD+D L+ G ++ F + E ++
Sbjct: 10 LQGLNIYLVGLMGVGKTAVGKEIAQQLNYRFFDTDDLIIRVEG-KAITDIFAQKGETYFR 68
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMV----ARMDHSG 206
+ ET+VL++LS R V+ G G + N + L+ G+ +W+D ++ A +
Sbjct: 69 ELETKVLQELSVCTRSVIATGGGIIMKKENWSFLQQGLVVWLDAKTDLIMERLAEDNTRP 128
Query: 207 FPESEVLPQ-LFALYKEMRDGYATADVTVSLQKVAS 241
++E Q L L+ + R YA +D+ +S+++ S
Sbjct: 129 LLKTENPKQTLDDLWWKRRSRYAQSDLQISIERSQS 164
>gi|318042493|ref|ZP_07974449.1| shikimate kinase [Synechococcus sp. CB0101]
Length = 207
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 61/111 (54%), Gaps = 1/111 (0%)
Query: 85 ADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRES 144
A++ L+G +++LVGM + K+ G+ LA+ L Y + D+DS + E G S + F
Sbjct: 6 AELRQRLEGLNLYLVGMMGSGKSTAGRHLAELLGYRFLDADSSI-EQVAGRSIPEVFASE 64
Query: 145 DEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVP 195
E G++Q E VL Q++S LVV G G V N L G+ +W+D P
Sbjct: 65 GEAGFRQLEAAVLNQIASWHSLVVATGGGVVTRPDNWGQLHQGVVIWLDAP 115
>gi|78778496|ref|YP_396608.1| shikimate kinase [Prochlorococcus marinus str. MIT 9312]
gi|78711995|gb|ABB49172.1| shikimate kinase [Prochlorococcus marinus str. MIT 9312]
Length = 185
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 81/153 (52%), Gaps = 7/153 (4%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
+KG S+FL+GM K+ G LA+ L+Y Y D DSL+ E +S + F + E ++
Sbjct: 13 IKGRSIFLIGMMGCGKSQTGLKLAELLKYKYIDLDSLI-EKLAKKSINQIFNDEGEDNFR 71
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGM-VARM----DHS 205
+ ET LK+ + LV+ G G V S N +LR GI WID+ + + R+ ++
Sbjct: 72 ELETSCLKETIKIPSLVISTGGGIVTKSENWGILRQGIIAWIDLDKDIAIERLKNEIENR 131
Query: 206 GFPESEVLPQLF-ALYKEMRDGYATADVTVSLQ 237
+ + L L+ ++ K + Y+ AD+ + ++
Sbjct: 132 PLLQGKNLNDLYMSILKSRENLYSQADLRIQVK 164
>gi|159464345|ref|XP_001690402.1| shikimate kinase [Chlamydomonas reinhardtii]
gi|158279902|gb|EDP05661.1| shikimate kinase [Chlamydomonas reinhardtii]
Length = 327
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 93/182 (51%), Gaps = 18/182 (9%)
Query: 80 VKKKAADISTELKGTSVFL--VGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESA 137
VK+ + +L+G +++L VGM + K+ +GK LA+ L+Y +FD+DS++ A +
Sbjct: 83 VKEVTDQLLPDLRGCNIWLFQVGMMGSGKSTVGKMLANTLKYAFFDTDSVIELAHDKKPV 142
Query: 138 AKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPG 197
++ F E + ++Q E++++K+LS LV+ G GAV N + GI W++
Sbjct: 143 SQIFAEEGQDYFRQCESQIIKELSPYRNLVISTGGGAVLKPQNWGYMHLGIVAWLNGDTE 202
Query: 198 MVA-RMDHSGF----------PESEVLPQ-----LFALYKEMRDGYATADVTVSLQKVAS 241
++A R+ G PE + Q L AL ++ R Y ADV V+L+
Sbjct: 203 LLARRVAKDGIEKRPLLAADAPEGADMQQVAKTKLDALLEDRRKYYENADVVVTLEGYGK 262
Query: 242 QL 243
L
Sbjct: 263 DL 264
>gi|123967661|ref|YP_001008519.1| shikimate kinase [Prochlorococcus marinus str. AS9601]
gi|123197771|gb|ABM69412.1| Shikimate kinase [Prochlorococcus marinus str. AS9601]
Length = 185
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 84/154 (54%), Gaps = 7/154 (4%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
LKG S+FL+GM + K+ G LA+ L+Y Y D DSL+ E +S + F + E+ ++
Sbjct: 13 LKGRSIFLIGMMGSGKSKTGLKLAELLKYKYIDLDSLI-EKLAKKSINQIFNDEGEEKFR 71
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGM-VARM----DHS 205
+ E LK+ + LV+ G G V S N +LR GI WID+ + + R+ ++
Sbjct: 72 ELEANCLKETIKIPSLVISTGGGIVTKSENWGILRQGIIAWIDLDKDIAIERLKNEIENR 131
Query: 206 GFPESEVLPQLF-ALYKEMRDGYATADVTVSLQK 238
+ + L L+ ++++ + Y+ AD+ + +++
Sbjct: 132 PLLQGKNLNDLYMSIFQSRENLYSQADLRIQVKR 165
>gi|46849856|gb|AAT02351.1| shikimate kinase, partial [Cucumis sativus]
Length = 157
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 74/139 (53%), Gaps = 13/139 (9%)
Query: 134 GESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWID 193
G S A+ F+ E +++ ETE L++LS M + V+ G GAV S N + GIS+W+D
Sbjct: 1 GISVAEVFKVYGEDFFRERETEALRKLSLMRQFVISTGGGAVTRSINWKYMHKGISVWLD 60
Query: 194 VP-PGMVARMDHSGFPE------------SEVLPQLFALYKEMRDGYATADVTVSLQKVA 240
VP +V R+ G S+ L +L L +E + YA A+V VS +K+A
Sbjct: 61 VPLEALVKRISAVGTNSRPLLHHDSNDAYSKTLVRLSTLLEERGEAYANAEVKVSCEKIA 120
Query: 241 SQLGYDDLDAVTTEDMTLE 259
++LG D+ VT + +E
Sbjct: 121 AKLGTKDVSNVTPMAIAIE 139
>gi|194476762|ref|YP_002048941.1| shikimate kinase [Paulinella chromatophora]
gi|171191769|gb|ACB42731.1| shikimate kinase [Paulinella chromatophora]
Length = 187
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 84/158 (53%), Gaps = 7/158 (4%)
Query: 83 KAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFR 142
K ++++ L+G +++LVG+ + K+ +GK LA AL Y + D+D V E A G++ + F
Sbjct: 2 KNSELTKHLQGLNIYLVGIMGSGKSTIGKPLATALNYSFADTDD-VLENATGQNISDIFS 60
Query: 143 ESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVAR- 201
+ E ++ E +VL ++S LVV G G V +S N ++ GI +W+D+ P ++ +
Sbjct: 61 VNGESHFRSLEHKVLSEISHYHSLVVATGGGVVINSNNWGIMHQGIVVWLDLAPNILFKR 120
Query: 202 --MDHSGFP---ESEVLPQLFALYKEMRDGYATADVTV 234
+D P S L L + R Y AD+ +
Sbjct: 121 LSIDTKPRPLLKNSHPKESLKILMAKRRSLYGEADIHI 158
>gi|323450494|gb|EGB06375.1| hypothetical protein AURANDRAFT_6341, partial [Aureococcus
anophagefferens]
Length = 165
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 80/152 (52%), Gaps = 11/152 (7%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYF-DSDSLVFEAAGGESAAKAFRESDEKGYQQAE 153
+V+LVG+ + K+ +G ++ L Y F D+D + E A G++ A F E G++ E
Sbjct: 1 NVYLVGLMGSGKSSVGDAISRQLGSYTFVDTDGTI-EQATGQTVAAIFESEGESGFRAVE 59
Query: 154 TEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPP-GMVARMDHSG------ 206
+VL Q+++ RLV+ G G V + AN A LR GI +W+DVP + AR+
Sbjct: 60 EQVLGQVAAYVRLVIATGGGIVTTKANWASLRQGIVVWLDVPTDSLAARLGSDAERAKRP 119
Query: 207 --FPESEVLPQLFALYKEMRDGYATADVTVSL 236
P E+ +L + ++ + Y DV VSL
Sbjct: 120 LLGPADELEAKLDGMLEDRSELYGQCDVRVSL 151
>gi|78183927|ref|YP_376362.1| shikimate kinase [Synechococcus sp. CC9902]
gi|124053405|sp|Q3B009.1|AROK_SYNS9 RecName: Full=Shikimate kinase; Short=SK
gi|78168221|gb|ABB25318.1| shikimate kinase [Synechococcus sp. CC9902]
Length = 191
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 80/169 (47%), Gaps = 14/169 (8%)
Query: 75 DPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGG 134
DP ++K++ L G S++L+GM + KT G+ LA L Y + D+D+ V E G
Sbjct: 3 DPILSLKER-------LSGRSIYLIGMMGSGKTSTGRPLAKRLGYGFVDADA-VIEQVAG 54
Query: 135 ESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDV 194
+ + F E G++ E++VL +S LVV G G V N L GI +W+DV
Sbjct: 55 CTIPEIFERDGEAGFRSIESQVLNAISQRHSLVVATGGGVVTKPENWGQLHSGIVVWLDV 114
Query: 195 PPGMVARMDHSGFPESEVLPQ------LFALYKEMRDGYATADVTVSLQ 237
+ + +L Q L L +E R Y AD+TV ++
Sbjct: 115 NRAQLIERLRDDSTQRPLLQQPNPEAALDTLLQERRPLYGEADLTVVIK 163
>gi|126695461|ref|YP_001090347.1| shikimate kinase [Prochlorococcus marinus str. MIT 9301]
gi|126542504|gb|ABO16746.1| Shikimate kinase [Prochlorococcus marinus str. MIT 9301]
Length = 185
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 82/154 (53%), Gaps = 7/154 (4%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
+KG S+FL+GM + K+ G LA+ L+Y Y D D+L+ E +S + F + E ++
Sbjct: 13 IKGRSIFLIGMMGSGKSQTGLKLAELLKYKYIDLDTLI-EKLAKKSINQIFNDEGEDNFR 71
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGM-VARMDHS---- 205
+ E LK+ + LV+ G G V S N +LR GI WID+ + + R+ +
Sbjct: 72 ELEANCLKETIKIPSLVISTGGGIVTKSENWGILRQGIIAWIDLDKDIAIERLKNEIKNR 131
Query: 206 GFPESEVLPQLF-ALYKEMRDGYATADVTVSLQK 238
+ + L L+ ++++ + Y+ AD+ + ++K
Sbjct: 132 PLLQGKNLNDLYMSIFQSRENLYSQADLRIQVKK 165
>gi|443313787|ref|ZP_21043397.1| shikimate kinase [Synechocystis sp. PCC 7509]
gi|442776200|gb|ELR86483.1| shikimate kinase [Synechocystis sp. PCC 7509]
Length = 188
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 89/163 (54%), Gaps = 8/163 (4%)
Query: 88 STELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEK 147
S LKG +++L+GM + KT +G +A L Y + D+D+ V E S ++ F E E
Sbjct: 7 SNLLKGVNLYLIGMMGSGKTTIGSLIATELGYGFVDTDA-VIEQVTKHSISQLFAEVGEA 65
Query: 148 GYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMV-ARMDHSG 206
++Q E++VL ++ + LVV G G V N + L +G+ +W+DVP ++ R+
Sbjct: 66 EFRQIESQVLAEVCAYTNLVVSTGGGIVTQQKNWSYLHYGLIVWLDVPIKVLYERLKEDN 125
Query: 207 ----FPESEVLPQLFALYKEMRDGYATAD--VTVSLQKVASQL 243
++ L +L +++++ + Y AD + VS ++ ASQ+
Sbjct: 126 TRPLLQAADPLGKLQSIFEQRQPLYNQADLHIRVSEEETASQI 168
>gi|158337774|ref|YP_001518950.1| shikimate kinase [Acaryochloris marina MBIC11017]
gi|158308015|gb|ABW29632.1| shikimate kinase [Acaryochloris marina MBIC11017]
Length = 182
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 62/104 (59%), Gaps = 1/104 (0%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
LKG +++LVGM K+ G+ LA L Y + D+D L+ + G ++ F ES E ++
Sbjct: 4 LKGVNLYLVGMMGCGKSTTGRALAKQLGYGFVDTDDLITQLTG-QAITDIFAESGEDHFR 62
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDV 194
Q E++VL ++++ LVV G G V N + L+HG+ +W+DV
Sbjct: 63 QVESKVLSEVAAHTNLVVATGGGIVLDKKNWSFLQHGLVIWLDV 106
>gi|434393629|ref|YP_007128576.1| shikimate kinase [Gloeocapsa sp. PCC 7428]
gi|428265470|gb|AFZ31416.1| shikimate kinase [Gloeocapsa sp. PCC 7428]
Length = 190
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
Query: 88 STELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEK 147
S LKG +++LVGM KT +G+ LA L Y + D+D ++ + +S ++ F S E
Sbjct: 8 SNVLKGVNLYLVGMMGTGKTTVGRALATKLGYRFVDTDEIITQVTQ-QSISEVFATSGEA 66
Query: 148 GYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVA 200
++Q ET+VL ++ + L + G G V N + L HG+ +W+D P +++
Sbjct: 67 AFRQIETQVLAKVCAYTHLAIATGGGIVLQRENWSYLHHGLIVWLDAPTELLS 119
>gi|87301781|ref|ZP_01084615.1| shikimate kinase [Synechococcus sp. WH 5701]
gi|87283349|gb|EAQ75304.1| shikimate kinase [Synechococcus sp. WH 5701]
Length = 220
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 65/121 (53%), Gaps = 3/121 (2%)
Query: 71 VAAEDPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFE 130
+A E PS A + L+G +++LVGM A K+ +G+ LA AL Y + D+DS V E
Sbjct: 1 MAIESPSPA--SVTPGLPGSLEGLNIYLVGMMGAGKSSVGRPLAQALGYRFIDADS-VLE 57
Query: 131 AAGGESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISL 190
G S + F + E G+++ E+ VL +++ LVV G G V N +R G+ +
Sbjct: 58 QHAGCSIPELFEQRGEAGFRELESAVLNRIACWHSLVVATGGGVVSRPCNWGQMRQGLVV 117
Query: 191 W 191
W
Sbjct: 118 W 118
>gi|254526222|ref|ZP_05138274.1| shikimate kinase [Prochlorococcus marinus str. MIT 9202]
gi|221537646|gb|EEE40099.1| shikimate kinase [Prochlorococcus marinus str. MIT 9202]
Length = 185
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 82/154 (53%), Gaps = 7/154 (4%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
+KG S+FL+GM + K+ G LA+ L+Y Y D D+L+ E +S + F++ E ++
Sbjct: 13 IKGRSIFLIGMMGSGKSQTGLKLAELLKYKYIDLDTLI-EKLAKKSINQIFKDEGEDNFR 71
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGM-VARMDHS---- 205
+ E LK+ + LV+ G G V N +LR GI WID+ + + R+ +
Sbjct: 72 ELEANCLKETIKIPSLVISTGGGIVTKPENWGILRQGIIAWIDLEKDIAIERLKNEIANR 131
Query: 206 GFPESEVLPQLF-ALYKEMRDGYATADVTVSLQK 238
+ + + L+ ++++ + Y+ AD+ + ++K
Sbjct: 132 PLLQGKNINDLYMSIFQSRENLYSQADLRIQVKK 165
>gi|22298425|ref|NP_681672.1| shikimate kinase [Thermosynechococcus elongatus BP-1]
gi|34222550|sp|Q8DKH7.1|AROK_THEEB RecName: Full=Shikimate kinase; Short=SK
gi|22294604|dbj|BAC08434.1| shikimate kinase [Thermosynechococcus elongatus BP-1]
Length = 183
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 77/155 (49%), Gaps = 6/155 (3%)
Query: 87 ISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDE 146
+ L G +++LVGM A KT G+ LA L Y + D+D+ V A + F + E
Sbjct: 3 LQERLGGANIYLVGMMGAGKTTTGRLLAQRLGYSFVDTDA-VITAFRQRPIREIFAQEGE 61
Query: 147 KGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVA---RMD 203
+++ E +VL Q+SS LVV G G V + N + L HGI +W+ VP ++ R D
Sbjct: 62 PAFRELEQQVLAQVSSYHHLVVATGGGIVLNPMNWSYLHHGIVVWLHVPLAVLCQRLRQD 121
Query: 204 HSG--FPESEVLPQLFALYKEMRDGYATADVTVSL 236
E + +L L + + YA AD+ + +
Sbjct: 122 RERPLLQEQPLEERLGELLQARQHLYAQADLELRI 156
>gi|254417028|ref|ZP_05030775.1| shikimate kinase [Coleofasciculus chthonoplastes PCC 7420]
gi|196176195|gb|EDX71212.1| shikimate kinase [Coleofasciculus chthonoplastes PCC 7420]
Length = 177
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
LKG +V+L+GM KT +G+ LA L Y + D+D L+ E G++ + F + E ++
Sbjct: 6 LKGINVYLIGMMGVGKTTVGQRLAKELGYRFVDTDVLI-EQVAGQTINQIFADRGEDEFR 64
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVP 195
Q E +VL ++S+ L V G G V N + L G+ +W+D P
Sbjct: 65 QLEAQVLSEVSAYTNLTVATGGGIVLKQMNWSYLHQGLIVWLDAP 109
>gi|124024892|ref|YP_001014008.1| shikimate kinase [Prochlorococcus marinus str. NATL1A]
gi|123959960|gb|ABM74743.1| Shikimate kinase [Prochlorococcus marinus str. NATL1A]
Length = 198
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 62/117 (52%), Gaps = 1/117 (0%)
Query: 78 FAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESA 137
AV+ + +L G ++FL+GM + K+ G LA + Y + D+D V E A +S
Sbjct: 1 MAVQSTPKTLKEKLGGRNIFLIGMMGSGKSQTGPVLAKMINYAFVDTDD-VIEKASKQSI 59
Query: 138 AKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDV 194
+ F + EK ++ E +VLK++S LV+ G G V N +L GI +W+D+
Sbjct: 60 SSIFEKDGEKVFRDVEKKVLKEISQHHSLVIATGGGLVTLPENWGILHQGIVIWLDL 116
>gi|72383312|ref|YP_292667.1| shikimate kinase [Prochlorococcus marinus str. NATL2A]
gi|115312159|sp|Q46HR4.1|AROK_PROMT RecName: Full=Shikimate kinase; Short=SK
gi|72003162|gb|AAZ58964.1| shikimate kinase [Prochlorococcus marinus str. NATL2A]
Length = 198
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 62/117 (52%), Gaps = 1/117 (0%)
Query: 78 FAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESA 137
AV+ + +L G ++FL+GM + K+ G LA + Y + D+D V E A +S
Sbjct: 1 MAVQSTPKTLKEKLGGRNIFLIGMMGSGKSQTGPVLAKMINYAFVDTDD-VIEKASKQSI 59
Query: 138 AKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDV 194
+ F + EK ++ E +VLK++S LV+ G G V N +L GI +W+D+
Sbjct: 60 SSIFEKDGEKVFRDVEKKVLKEISQHHSLVIATGGGLVTLPENWGILHQGIVIWLDL 116
>gi|412985827|emb|CCO17027.1| shikimate kinase [Bathycoccus prasinos]
Length = 305
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 19/168 (11%)
Query: 88 STELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEK 147
S L+ +SVFL+G+ KT +GK LADAL Y YFD+D L+ E + + F E E+
Sbjct: 80 SESLQSSSVFLLGLMGTGKTTVGKKLADALGYGYFDTDQLI-EQICKQKVHEIFEEDGEE 138
Query: 148 GYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVARMDHS-G 206
G+++ E+ +L +++S R+VV G G V N L +G+++ + +AR H G
Sbjct: 139 GFRETESAILAEVASYKRVVVSTGGGIVTVRNNWMHLHNGVTVCLQGDHRTLARRVHKDG 198
Query: 207 FPESEVLPQLF-----------------ALYKEMRDGYATADVTVSLQ 237
+L + +L+++ YA D+ VS+
Sbjct: 199 VGARPLLKECLSEEDEEAQITKIEEKIQSLWRDRGKMYAECDIAVSVN 246
>gi|397609609|gb|EJK60447.1| hypothetical protein THAOC_19201 [Thalassiosira oceanica]
Length = 282
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 108/244 (44%), Gaps = 18/244 (7%)
Query: 27 PFSLLHSQSYAPIRTSLQYSIISRKPRITTRSIADDTTSNT------VTKVAAEDPSFAV 80
PFSL+ Q + T+ + S + T AD N + K A D +
Sbjct: 19 PFSLVVHQRRQAVVTTTRLSAGGFEWEDPTSDQADPGVENPYKNPELLKKTADGDEEGLL 78
Query: 81 KKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKA 140
A +S L+G +++L+GM + K+ +G LA + Y F ++ E A G S +
Sbjct: 79 VDPARLLSPRLRGCNLYLIGMMGSGKSAVGDALARRMGTYNFLDTDVILERAVGMSIPEI 138
Query: 141 FRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMV- 199
F + E ++ AE +VL + + R V+ G G V + N A L+ G+ L++ P +
Sbjct: 139 FEKEGEDAFRDAEAQVLDSVHAHVRCVIGTGGGLVTRNQNWAKLQTGLVLYLKTDPETIY 198
Query: 200 ARMDHSGFP---ESEVLPQLFALYKEMRDGYATADVTVSLQKVASQLGYDDLDAVTTEDM 256
R++ + P + L L L +E R Y ADVT+ ++ D +D DM
Sbjct: 199 KRIEGTDRPLLQTDDPLATLKDLTEERRGKYEQADVTIEVE--------DGMDVEAVTDM 250
Query: 257 TLEV 260
+ +
Sbjct: 251 CIRM 254
>gi|116071455|ref|ZP_01468723.1| shikimate kinase [Synechococcus sp. BL107]
gi|116065078|gb|EAU70836.1| shikimate kinase [Synechococcus sp. BL107]
Length = 191
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 80/169 (47%), Gaps = 14/169 (8%)
Query: 75 DPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGG 134
DP ++K++ L G S++L+GM + KT G+ LA L Y + D+D+ V E
Sbjct: 3 DPILSLKER-------LGGRSIYLIGMMGSGKTSTGRPLAKRLGYGFVDADA-VIEQVAN 54
Query: 135 ESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDV 194
+ + F E+G++ E++VL +S LVV G G V N L GI +W+DV
Sbjct: 55 CTIPEIFERDGEEGFRLIESQVLNAISQRHSLVVATGGGVVTKPENWGQLHSGIVVWLDV 114
Query: 195 PPGMVARMDHSGFPESEVLPQ------LFALYKEMRDGYATADVTVSLQ 237
+ + +L Q L AL + R Y AD+TV +Q
Sbjct: 115 DRLQLIERLRGDATQRPLLQQPDPEAALDALLLQRRPLYDEADLTVVIQ 163
>gi|254430567|ref|ZP_05044270.1| shikimate kinase [Cyanobium sp. PCC 7001]
gi|197625020|gb|EDY37579.1| shikimate kinase [Cyanobium sp. PCC 7001]
Length = 191
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 109 LGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVV 168
+G LADAL Y + D+D+ V E A G A+ F E E G+++ ET VL+Q+SS LVV
Sbjct: 1 MGAPLADALGYRFVDADT-VLEQAAGRGIAEIFAEDGEAGFRELETAVLEQISSWHSLVV 59
Query: 169 CAGNGAVQSSANLALLRHGISLWIDVP 195
G G V N L G+ +W+D P
Sbjct: 60 ATGGGVVTRPRNWGHLHQGVVVWLDAP 86
>gi|159902664|ref|YP_001550008.1| shikimate kinase [Prochlorococcus marinus str. MIT 9211]
gi|254806781|sp|A9BCW6.1|AROK_PROM4 RecName: Full=Shikimate kinase; Short=SK
gi|159887840|gb|ABX08054.1| Shikimate kinase [Prochlorococcus marinus str. MIT 9211]
Length = 197
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 79/157 (50%), Gaps = 6/157 (3%)
Query: 87 ISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDE 146
+ +L G +++LVGM + K+ G LA L Y + D D V E +S ++ F + E
Sbjct: 10 VCKKLGGRNLYLVGMMGSGKSRTGPVLAKKLSYGFVDVDD-VIEKVTNQSISEIFDQEGE 68
Query: 147 KGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMV---ARMD 203
G+++ ET++L+++ LVV G G V N +L G+ +WID+ + R D
Sbjct: 69 IGFREIETQILQEIGQRHSLVVATGGGIVTRPENWGILHQGVVIWIDLDREIALSRLRSD 128
Query: 204 HSGFP--ESEVLPQLFALYKEMRDGYATADVTVSLQK 238
+ P + + L+KE Y +DV +S+++
Sbjct: 129 ETPRPLLQKNLDDNFDCLFKERLPIYLESDVHLSVRE 165
>gi|124021918|ref|YP_001016225.1| shikimate kinase [Prochlorococcus marinus str. MIT 9303]
gi|254806780|sp|A2C650.1|AROK_PROM3 RecName: Full=Shikimate kinase; Short=SK
gi|123962204|gb|ABM76960.1| Shikimate kinase [Prochlorococcus marinus str. MIT 9303]
Length = 192
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 58/107 (54%), Gaps = 1/107 (0%)
Query: 87 ISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDE 146
+ L G +++LVGM + K+ G+ LA+ L Y + D+D+ V E G+ K F E E
Sbjct: 10 LKQRLGGRNLYLVGMMASGKSSTGRPLAEQLSYGFVDTDA-VIEQLAGQPIPKIFNEEGE 68
Query: 147 KGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWID 193
+G++ E++VL + LVV G G V N +L GI +W++
Sbjct: 69 EGFRAMESQVLNAIGQRHSLVVATGGGMVSKPENWGILHQGIVIWLN 115
>gi|220908896|ref|YP_002484207.1| shikimate kinase [Cyanothece sp. PCC 7425]
gi|219865507|gb|ACL45846.1| Shikimate kinase [Cyanothece sp. PCC 7425]
Length = 169
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 5/141 (3%)
Query: 101 MNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEVLKQL 160
M + KT K LA +L Y YFD+D+L+ + AG S + F E ++Q ET+VL +L
Sbjct: 1 MMGSGKTSTAKLLAQSLGYRYFDTDTLIEQLAGC-SVREIFARWGEPQFRQWETQVLAEL 59
Query: 161 SSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVARM---DHS-GFPESEVLPQL 216
S LV+ G G V + N + L HG+ +W++VP +++ D + L +L
Sbjct: 60 SPYKNLVIATGGGIVLNPINWSYLHHGLVVWLNVPLEELSQRLVGDRTRPLLADNPLERL 119
Query: 217 FALYKEMRDGYATADVTVSLQ 237
L + R YA AD+ V ++
Sbjct: 120 QTLLDQRRPYYAQADLQVQVR 140
>gi|218281481|ref|ZP_03487924.1| hypothetical protein EUBIFOR_00489 [Eubacterium biforme DSM 3989]
gi|218217403|gb|EEC90941.1| hypothetical protein EUBIFOR_00489 [Eubacterium biforme DSM 3989]
Length = 427
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 61/101 (60%), Gaps = 2/101 (1%)
Query: 94 TSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAE 153
++ L+GM +A KT +GK L + L +FD D ++ A G+S + F+ES E G++ E
Sbjct: 260 CNIVLIGMPSAGKTTIGKMLEEKLGKEFFDLDDMII-AKAGKSIPEIFQESGEAGFRAIE 318
Query: 154 TEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
TEV + S M ++ G GA++ N+ LR +GI+++ID
Sbjct: 319 TEVAIEASKMNNKIIATGGGAIKHKVNMDFLRLNGITIFID 359
>gi|397566788|gb|EJK45217.1| hypothetical protein THAOC_36180 [Thalassiosira oceanica]
Length = 278
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 86/178 (48%), Gaps = 12/178 (6%)
Query: 87 ISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDE 146
+S L+G +++L+GM + K+ +G LA + Y F ++ E A G S + F + E
Sbjct: 81 LSPRLRGCNLYLIGMMGSGKSAVGDALARRMGTYNFLDTDVILERAVGMSIPEIFEKEGE 140
Query: 147 KGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMV-ARMDHS 205
++ AE +VL + + R V+ G G V + N A L+ G+ L++ P + R++ +
Sbjct: 141 DAFRDAEAQVLDSVHAHVRCVIGTGGGLVTRNQNWAKLQTGLVLYLKTDPETIYKRIEGT 200
Query: 206 GFP---ESEVLPQLFALYKEMRDGYATADVTVSLQKVASQLGYDDLDAVTTEDMTLEV 260
P + L L L +E R Y ADVT+ ++ D +D DM + +
Sbjct: 201 DRPLLQTDDPLATLKDLTEERRGKYEQADVTIEVE--------DGMDVEAVTDMCIRM 250
>gi|449019708|dbj|BAM83110.1| shikimate kinase [Cyanidioschyzon merolae strain 10D]
Length = 287
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 79/172 (45%), Gaps = 22/172 (12%)
Query: 86 DISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESD 145
+ +L G SV+LVGM + K+ LG +LA AL Y + D+D ++ E +S + F +
Sbjct: 78 QLREKLHGASVYLVGMMGSGKSTLGAYLAKALEYAFIDTD-VIIERTLQKSIPEIFAQDG 136
Query: 146 EKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVARMDHS 205
E+ ++ E+ VL+ L S R VV G G V N L G+ ++++ P M+A+
Sbjct: 137 EETFRDVESLVLESLQSHVRTVVATGGGVVLRQRNWGTLHTGLVVYLNGTPDMLAKRVQG 196
Query: 206 G-----------------FPESEVLPQLFA----LYKEMRDGYATADVTVSL 236
G PE + L A + E Y ADVTV L
Sbjct: 197 GAGRPLLSNTMHAPADSTIPEPAAIEALSARLAEILSEREHFYRQADVTVEL 248
>gi|255594862|ref|XP_002536182.1| conserved hypothetical protein [Ricinus communis]
gi|223520575|gb|EEF26201.1| conserved hypothetical protein [Ricinus communis]
Length = 180
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 68/126 (53%), Gaps = 13/126 (10%)
Query: 124 SDSLVFEAAGGESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLAL 183
SD V + AGG S + F++ E ++ E+E L++LS + R VV G G+V N
Sbjct: 19 SDEYVEQTAGGNSVSHIFQQYGEDYFRDIESEALQKLSIIPRQVVATGGGSVVRPINWKY 78
Query: 184 LRHGISLWIDVPPGMVAR-----------MDH--SGFPESEVLPQLFALYKEMRDGYATA 230
+R GI++++DVP +AR + H SG P ++ LF L K+ + Y+ A
Sbjct: 79 MRQGITVFLDVPLDALARRIAAVGTDSRPLLHLDSGDPYTKAFMGLFTLSKKRVEAYSDA 138
Query: 231 DVTVSL 236
DVTVSL
Sbjct: 139 DVTVSL 144
>gi|224007048|ref|XP_002292484.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220972126|gb|EED90459.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 293
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 87/174 (50%), Gaps = 14/174 (8%)
Query: 61 DDTTSNTVTKVAAEDPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYY 120
DDT T KV DP A +S L+G +++ +GM + K+ +G LA + Y
Sbjct: 80 DDTNGTTTLKV---DP-------ARLLSPRLQGCNLYFIGMMGSGKSAVGDALARRMGTY 129
Query: 121 YFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSAN 180
F ++ E A G S K F+ E+ +++AE +VL + + R VV G G + + N
Sbjct: 130 NFLDTDVILERAAGMSIPKIFQTEGEEAFREAEAQVLDSVHAHVRCVVSTGGGMILRNQN 189
Query: 181 LALLRHGISLWIDVPPGMV-ARMDHSGFP---ESEVLPQLFALYKEMRDGYATA 230
+ L+ G+ +++ V P ++ R++ + P + L L +L +E R+ Y A
Sbjct: 190 WSKLQTGLVVYLKVEPEVIMKRIEGTDRPLLQTEDPLETLRSLMEERRERYEQA 243
>gi|33862436|ref|NP_893996.1| shikimate kinase [Prochlorococcus marinus str. MIT 9313]
gi|81578001|sp|Q7V904.1|AROK_PROMM RecName: Full=Shikimate kinase; Short=SK
gi|33640549|emb|CAE20338.1| Shikimate kinase [Prochlorococcus marinus str. MIT 9313]
Length = 192
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 1/107 (0%)
Query: 87 ISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDE 146
+ L G +++LVGM + K+ G+ LA+ L Y + D+D+ V E G+ K F E E
Sbjct: 10 LKQRLGGRNLYLVGMMASGKSSTGRPLAEQLSYGFVDTDA-VIEQLAGQPIPKIFSEEGE 68
Query: 147 KGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWID 193
G++ E++VL + LVV G G V N +L GI +W++
Sbjct: 69 AGFRTMESQVLNAIGQRHSLVVATGGGIVSKPENWGVLHQGIVIWLN 115
>gi|436836999|ref|YP_007322215.1| Shikimate kinase [Fibrella aestuarina BUZ 2]
gi|384068412|emb|CCH01622.1| Shikimate kinase [Fibrella aestuarina BUZ 2]
Length = 174
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 89/170 (52%), Gaps = 21/170 (12%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+++L+GM ++ K+ LGK LA L Y++ D+D ++ G + + F +S E +++AE
Sbjct: 3 NIYLIGMPSSGKSTLGKRLARELMYFFVDTDRMIIREE-GRTIPEIFSQSGEVYFREAEA 61
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDV-PPGMVARM---------D 203
VL+ + G V+ G G N+A ++ G+S+++DV P ++ARM D
Sbjct: 62 RVLRSIRPGGSQVIATGGGMPCFHDNMAYIKATGVSIFLDVSPEAILARMQVHAQEYPAD 121
Query: 204 HSGFP-----ESEVLPQLFALYKEMRDGYATADVTV----SLQKVASQLG 244
+ P + E+L L Y + D Y AD+T+ ++Q V +LG
Sbjct: 122 ATDRPLYNPYDDELLGTLRQKYDDRIDIYRQADITITGDATVQAVLDRLG 171
>gi|116073893|ref|ZP_01471155.1| shikimate kinase [Synechococcus sp. RS9916]
gi|116069198|gb|EAU74950.1| shikimate kinase [Synechococcus sp. RS9916]
Length = 201
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 63/121 (52%), Gaps = 6/121 (4%)
Query: 87 ISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDE 146
+ + L G +++LVGM + K+ G+ LA L Y + D+D V E G + F E E
Sbjct: 12 LRSRLGGRNLYLVGMMGSGKSSSGRPLAQQLGYGFVDADP-VIEQVAGRPIPQIFSEDGE 70
Query: 147 KGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPG---MVARMD 203
G++ E +VL+ + LVV G G V N +L GI +W++ PG ++AR+
Sbjct: 71 DGFRAIEAQVLQAIGQRHSLVVATGGGVVTKPENWGVLHQGIVIWLN--PGRDRLLARLQ 128
Query: 204 H 204
+
Sbjct: 129 N 129
>gi|312130327|ref|YP_003997667.1| shikimate kinase [Leadbetterella byssophila DSM 17132]
gi|311906873|gb|ADQ17314.1| Shikimate kinase [Leadbetterella byssophila DSM 17132]
Length = 177
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 83/152 (54%), Gaps = 11/152 (7%)
Query: 94 TSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAE 153
T++F++GM ++ K+ LG+ LA L Y + D D + E A G ++ F E+ +++ E
Sbjct: 3 TNIFMIGMPSSGKSTLGRQLAKELNYEFIDLDKKI-ELAEGRKISEIFNLEGEEYFRKIE 61
Query: 154 TEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDV-PPGMVARMDHS---GFP 208
TE LK++ RLV+ G G + N+ ++ +GIS+++DV P + RM +S P
Sbjct: 62 TEHLKRIEPNSRLVIATGGGTPCNGNNMDFIKENGISVFLDVKPKKLEERMRNSKKNNRP 121
Query: 209 ----ESEVL-PQLFALYKEMRDGYATADVTVS 235
ESE+L L Y++ + Y AD+ +
Sbjct: 122 LYNLESELLVDTLTKTYEDRIETYKRADIVIE 153
>gi|219127919|ref|XP_002184173.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404404|gb|EEC44351.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 277
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 89/190 (46%), Gaps = 16/190 (8%)
Query: 87 ISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYF-DSDSLVFEAAGGESAAKAFRESD 145
+ L G++V+ VG+ + K+ +G LA + Y F D+D ++ E A G + + F+
Sbjct: 80 LGPRLNGSNVYFVGIMGSGKSAVGDILARRMGTYNFLDTDEII-ERATGMTIPEIFKAEG 138
Query: 146 EKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVAR---- 201
E+G++ E +VL + R ++ G G V N + L+ G+ +W+D P ++ R
Sbjct: 139 EEGFRTVEAQVLDSVHPYVRCIISTGGGIVIKLENWSKLQTGLVVWLDCEPEVIMRRIEG 198
Query: 202 MDHSGFPESEVLPQLFALYKEMRDGYATADVTVSLQKVASQLGYDDLDAVTTEDMTLEVK 261
D L +L L E D Y+ AD+ + + +D+D D L ++
Sbjct: 199 TDRPLLQTDNPLQKLKDLLAEREDKYSQADIRIKVT--------EDMDTEHVAD--LAIR 248
Query: 262 WLYNASISDP 271
L+N +P
Sbjct: 249 ELHNFIDENP 258
>gi|284037203|ref|YP_003387133.1| shikimate kinase [Spirosoma linguale DSM 74]
gi|283816496|gb|ADB38334.1| Shikimate kinase [Spirosoma linguale DSM 74]
Length = 168
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FL+GM ++ K+ LGK +AD L Y + D+D L+ G + A+ F ES E +++AE
Sbjct: 3 NIFLIGMPSSGKSTLGKRVADTLHYRFIDTDKLISREE-GRTIAEIFAESGEAYFREAER 61
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVP 195
VL+ + G +VV G G N+A + G+S+++DVP
Sbjct: 62 RVLRTIRPGGNMVVSTGGGMPCFHDNMAYINATGVSVFLDVP 103
>gi|434383184|ref|YP_006704967.1| shikimate kinase [Brachyspira pilosicoli WesB]
gi|404431833|emb|CCG57879.1| shikimate kinase [Brachyspira pilosicoli WesB]
Length = 174
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 68/113 (60%), Gaps = 3/113 (2%)
Query: 89 TELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKG 148
+LK T +F++G+ + K+ L K LA+ + Y +FD D V E+ ++ K F + E+
Sbjct: 3 NDLKNT-IFVIGLPGSGKSDLSKLLAEYINYTFFDMDK-VIESREKKTINKIFEDRGEEY 60
Query: 149 YQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMVA 200
+++ E++VL++LS++ VV G GA+ N AL++ GI ++ID P ++
Sbjct: 61 FREVESDVLEELSNIKNAVVSTGGGAILKEKNRALMKERGIVIFIDRPAELIV 113
>gi|5042170|emb|CAB44689.1| shikimate kinase-like protein [Arabidopsis thaliana]
gi|7270938|emb|CAB80617.1| shikimate kinase-like protein [Arabidopsis thaliana]
Length = 305
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 73/151 (48%), Gaps = 15/151 (9%)
Query: 124 SDSLVFEAAGGESAAKAFRESDEKGYQQAETEVLKQLSSM-GRLVVCAGNGAVQSSANLA 182
D+L+ +A G S A+ F E +++ ETE LK+LS M ++VV G GAV N
Sbjct: 134 CDTLIEQAMKGTSVAEIFEHFGESVFREKETEALKKLSLMYHQVVVSTGGGAVIRPINWK 193
Query: 183 LLRHGISLWIDVPPGMVARM--------------DHSGFPESEVLPQLFALYKEMRDGYA 228
+ GIS+W+DVP +A D SG + L +L ++ + Y
Sbjct: 194 YMHKGISIWLDVPLEALAHRIAAVGTGSRPLLHDDESGDTYTAALNRLSTIWDARGEAYT 253
Query: 229 TADVTVSLQKVASQLGYDDLDAVTTEDMTLE 259
A VSL+ + +LGY + +T ++ +E
Sbjct: 254 KASARVSLENITLKLGYRSVSDLTPAEIAIE 284
>gi|82701785|ref|YP_411351.1| shikimate kinase [Nitrosospira multiformis ATCC 25196]
gi|115312154|sp|Q2YBB2.1|AROK_NITMU RecName: Full=Shikimate kinase; Short=SK
gi|82409850|gb|ABB73959.1| shikimate kinase [Nitrosospira multiformis ATCC 25196]
Length = 195
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 63/112 (56%), Gaps = 4/112 (3%)
Query: 76 PSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGE 135
P+ VK +A D + ++FLVGM A KT +G+ L+ L ++DSD + + G
Sbjct: 9 PAVDVKGEAGDRAAT---GNIFLVGMMGAGKTTVGRLLSHFLEKTFYDSDREI-QKRTGV 64
Query: 136 SAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHG 187
S F E+G+++ ETE+L +L + +++ G GAV S N A+L+HG
Sbjct: 65 SIPTIFEIEGEEGFRRRETEILSELMNARNIILATGGGAVLSGVNRAMLKHG 116
>gi|300870692|ref|YP_003785563.1| shikimate kinase [Brachyspira pilosicoli 95/1000]
gi|431808479|ref|YP_007235377.1| shikimate kinase [Brachyspira pilosicoli P43/6/78]
gi|300688391|gb|ADK31062.1| shikimate kinase [Brachyspira pilosicoli 95/1000]
gi|430781838|gb|AGA67122.1| shikimate kinase [Brachyspira pilosicoli P43/6/78]
Length = 173
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 69/113 (61%), Gaps = 3/113 (2%)
Query: 89 TELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKG 148
+LK T +F++G+ + K+ L K LA+ + Y +FD D V E+ ++ K F ++ E+
Sbjct: 2 NDLKKT-IFVIGLPGSGKSDLSKLLAEYINYSFFDMDK-VIESREKKTINKIFEDNGEEY 59
Query: 149 YQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMVA 200
+++ E++VL++LS++ V+ G GA+ N AL++ GI ++ID P ++
Sbjct: 60 FREVESDVLEELSNIKNAVISTGGGAILKEKNRALMKERGIVIFIDRPAELIV 112
>gi|113955447|ref|YP_731746.1| shikimate kinase [Synechococcus sp. CC9311]
gi|113882798|gb|ABI47756.1| shikimate kinase [Synechococcus sp. CC9311]
Length = 212
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Query: 87 ISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDE 146
+ L G +++L+GM + K+ G+ LA L Y + D+D +V EA G + F E
Sbjct: 20 LKARLGGRNLYLIGMMGSGKSSTGRPLAQRLGYGFVDADGVV-EALAGRPIPQIFETDGE 78
Query: 147 KGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWI 192
+G++ E++VL+ + LVV G G + N +L GI +W+
Sbjct: 79 QGFRTLESQVLQAIGQRHSLVVATGGGVITQPENWGVLHQGIVIWL 124
>gi|404474947|ref|YP_006706378.1| shikimate kinase [Brachyspira pilosicoli B2904]
gi|404436436|gb|AFR69630.1| shikimate kinase [Brachyspira pilosicoli B2904]
Length = 147
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 68/113 (60%), Gaps = 3/113 (2%)
Query: 89 TELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKG 148
+LK T +F++G+ + K+ L K LA+ + Y +FD D V E+ ++ K F +S E+
Sbjct: 3 NDLKKT-IFVIGLPGSGKSDLSKLLAEYIDYTFFDMDK-VIESREKKTINKIFEDSGEEY 60
Query: 149 YQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMVA 200
+++ E++VL++LS++ V+ G GA+ N L++ GI ++ID P ++
Sbjct: 61 FREVESDVLEELSNIKNAVISTGGGAILKEKNRVLMKERGIVIFIDRPAELIV 113
>gi|309775588|ref|ZP_07670588.1| shikimate dehydrogenase [Erysipelotrichaceae bacterium 3_1_53]
gi|308916682|gb|EFP62422.1| shikimate dehydrogenase [Erysipelotrichaceae bacterium 3_1_53]
Length = 421
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 60/101 (59%), Gaps = 2/101 (1%)
Query: 94 TSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAE 153
++ L+GM +A KT +GK L D ++ + D D ++ E AG +S + F ES E G++ E
Sbjct: 254 CNIVLIGMPSAGKTTIGKMLEDRMQKEFIDLDDVIIEKAG-KSIPEIFEESGEAGFRAIE 312
Query: 154 TEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
TE ++S + ++ G G ++ N+ LR +GI+++ID
Sbjct: 313 TEAAIEVSKLNNKIIATGGGTIKHKVNMDYLRQNGITIFID 353
>gi|257784266|ref|YP_003179483.1| shikimate kinase [Atopobium parvulum DSM 20469]
gi|257472773|gb|ACV50892.1| Shikimate kinase [Atopobium parvulum DSM 20469]
Length = 182
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 79/158 (50%), Gaps = 10/158 (6%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+F VG A K+ L + L + Y D+D L E G+S A+ + E+ ++QAETE
Sbjct: 17 IFFVGFLGAGKSTLARNLGELFHRRYVDTDRLA-ERIAGKSLAEIYENDGEELFRQAETE 75
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVPPG----MVARMDHSGFPES 210
VL L S L+V G G V+ NLAL+R G+ +++D + R D P+
Sbjct: 76 VLHTLKSKKSLLVSCGGGIVEKDINLALMREMGVIVFLDGDLSDSLRQIQRTDRR--PDL 133
Query: 211 EVLPQLFALYKEMRDGY-ATADVTVSL-QKVASQLGYD 246
+ LY+ +R Y A AD+T+ + +K Q+ D
Sbjct: 134 GSVENATQLYRRLRPRYEAAADITIDIREKTFEQVAID 171
>gi|313669029|ref|YP_004049313.1| shikimate kinase [Neisseria lactamica 020-06]
gi|313006491|emb|CBN87954.1| putative shikimate kinase [Neisseria lactamica 020-06]
Length = 170
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 72/137 (52%), Gaps = 4/137 (2%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+ L+G+ A KT LG+ +A L Y ++DSD + AA G S F E+G++ ET
Sbjct: 8 LILIGLMGAGKTTLGRQMAQRLDYRFYDSDHEI-AAAAGVSIPTIFEMEGERGFRSRETA 66
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVPPGMVARMDHSGFPESEVLP 214
+LK+L + +V+ G GAV N AL+R G +++ PP + ++ + S L
Sbjct: 67 ILKKLIVLPHIVLSTGGGAVLKEENRALIRKSGTVVYLHAPPETL--LERTRCDNSRPLL 124
Query: 215 QLFALYKEMRDGYATAD 231
Q+ ++R+ YA D
Sbjct: 125 QVADPLGKLRELYAARD 141
>gi|409402045|ref|ZP_11251671.1| bifunctional shikimate kinase/3-dehydroquinate synthase [Acidocella
sp. MX-AZ02]
gi|409129363|gb|EKM99221.1| bifunctional shikimate kinase/3-dehydroquinate synthase [Acidocella
sp. MX-AZ02]
Length = 537
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 83/150 (55%), Gaps = 15/150 (10%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
S+ LVG+ A KT +GK L+ L+ +FD+D + E A G + ++ F+ E ++ E
Sbjct: 4 SIVLVGLMGAGKTAIGKRLSALLKLPFFDADEEI-ERAAGMTISEIFKTHGEAYFRAGEK 62
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVP-PGMVAR--------MDH 204
V+K+L S GR+V+ G GA + A +R + +S+W+ P P +V R + +
Sbjct: 63 RVIKRLLSQGRIVLATGGGAFMDAETRATIREYAVSVWLRCPIPVLVQRTSGRTHRPLLN 122
Query: 205 SGFPESEVLPQLFALYKEMRDGYATADVTV 234
+G P +++L +L A+ + YA AD+ V
Sbjct: 123 AGNP-ADILSKLSAVRSPV---YALADIIV 148
>gi|421545121|ref|ZP_15991186.1| shikimate kinase [Neisseria meningitidis NM140]
gi|421548141|ref|ZP_15994169.1| shikimate kinase [Neisseria meningitidis NM2781]
gi|402321804|gb|EJU57276.1| shikimate kinase [Neisseria meningitidis NM140]
gi|402326863|gb|EJU62261.1| shikimate kinase [Neisseria meningitidis NM2781]
Length = 170
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 74/137 (54%), Gaps = 4/137 (2%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+ L+G+ A KT LG+ +A L Y ++DSD + AA G F E+G++ ET
Sbjct: 8 LILIGLMGAGKTTLGRQMAQRLDYRFYDSDHEI-AAAAGVPIPTIFEMEGEQGFRSRETA 66
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVPPGMVARMDHSGFPESEVLP 214
+LK+L + +V+ +G GAV N AL+R G +++ PP ++ ++ + S L
Sbjct: 67 ILKKLVILPHIVLSSGGGAVLKEENRALIRKSGTVVYLHAPPEIL--LERTRCDNSRPLL 124
Query: 215 QLFALYKEMRDGYATAD 231
Q+ +++R+ YA D
Sbjct: 125 QVADPLEKLRELYAARD 141
>gi|338214778|ref|YP_004658841.1| shikimate kinase [Runella slithyformis DSM 19594]
gi|336308607|gb|AEI51709.1| Shikimate kinase [Runella slithyformis DSM 19594]
Length = 171
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 80/151 (52%), Gaps = 11/151 (7%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG+ ++ KT LGK LA LRY + D+D L+ + G S F + E +++AE
Sbjct: 3 NIFLVGLPSSGKTTLGKQLARQLRYRFVDTDVLIVKEE-GMSINAIFAQKGEPYFREAEA 61
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPP----GMVARMDHSGFP- 208
+L+ + +L+V G G N+A ++ +GIS+++DV P + R + P
Sbjct: 62 RILRAIRPDSKLIVATGGGVPYFHDNMAYIKENGISVFLDVAPEEIVDRIQRHSSNDRPT 121
Query: 209 ----ESEVLPQLFALYKEMRDGYATADVTVS 235
++++L L Y++ Y+ AD T+
Sbjct: 122 YQKQDTQLLENLQQRYRDRFPFYSQADFTLK 152
>gi|346314394|ref|ZP_08855915.1| hypothetical protein HMPREF9022_01572 [Erysipelotrichaceae
bacterium 2_2_44A]
gi|345906752|gb|EGX76476.1| hypothetical protein HMPREF9022_01572 [Erysipelotrichaceae
bacterium 2_2_44A]
Length = 421
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 60/101 (59%), Gaps = 2/101 (1%)
Query: 94 TSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAE 153
++ L+GM +A KT +GK L + ++ + D D ++ E AG +S + F ES E G++ E
Sbjct: 254 CNIVLIGMPSAGKTTIGKMLENRMQKEFIDLDDIIIEKAG-KSIPEIFEESGEAGFRAIE 312
Query: 154 TEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
TE ++S + ++ G G ++ N+ LR +GI+++ID
Sbjct: 313 TEAAIEVSKLNNKIIATGGGTIKHKVNMDYLRQNGITIFID 353
>gi|352096131|ref|ZP_08957078.1| Shikimate kinase [Synechococcus sp. WH 8016]
gi|351677487|gb|EHA60636.1| Shikimate kinase [Synechococcus sp. WH 8016]
Length = 204
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
Query: 87 ISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDE 146
+ L G +++L+GM + K+ G+ LA L Y + D+D +V EA G + F E
Sbjct: 12 LKARLGGRNLYLIGMMGSGKSSTGRPLAQRLGYGFVDADGVV-EALAGRPIPQIFETEGE 70
Query: 147 KGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWI 192
G++ E++VL+ + LVV G G + N +L GI +W+
Sbjct: 71 PGFRALESQVLQAIGERHSLVVATGGGVITQPENWGVLHQGIVIWL 116
>gi|422327329|ref|ZP_16408356.1| shikimate 5-dehydrogenase [Erysipelotrichaceae bacterium 6_1_45]
gi|371663634|gb|EHO28821.1| shikimate 5-dehydrogenase [Erysipelotrichaceae bacterium 6_1_45]
Length = 421
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 60/101 (59%), Gaps = 2/101 (1%)
Query: 94 TSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAE 153
++ L+GM +A KT +GK L + ++ + D D ++ E AG +S + F ES E G++ E
Sbjct: 254 CNIVLIGMPSAGKTTIGKMLENRMQKEFIDLDDIIIEKAG-KSIPEIFEESGEAGFRAIE 312
Query: 154 TEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
TE ++S + ++ G G ++ N+ LR +GI+++ID
Sbjct: 313 TEAAIEVSKLNNKIIATGGGTIKHKVNMDYLRQNGITIFID 353
>gi|313901106|ref|ZP_07834594.1| shikimate kinase [Clostridium sp. HGF2]
gi|312954064|gb|EFR35744.1| shikimate kinase [Clostridium sp. HGF2]
Length = 421
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 60/101 (59%), Gaps = 2/101 (1%)
Query: 94 TSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAE 153
++ L+GM +A KT +GK L + ++ + D D ++ E AG +S + F ES E G++ E
Sbjct: 254 CNIVLIGMPSAGKTTIGKMLENRMQKEFIDLDDIIIEKAG-KSIPEIFEESGEAGFRAIE 312
Query: 154 TEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
TE ++S + ++ G G ++ N+ LR +GI+++ID
Sbjct: 313 TEAAIEVSKLNNKIIATGGGTIKHKVNMDYLRQNGITIFID 353
>gi|373121315|ref|ZP_09535183.1| shikimate 5-dehydrogenase [Erysipelotrichaceae bacterium 21_3]
gi|371665333|gb|EHO30498.1| shikimate 5-dehydrogenase [Erysipelotrichaceae bacterium 21_3]
Length = 421
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 60/101 (59%), Gaps = 2/101 (1%)
Query: 94 TSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAE 153
++ L+GM +A KT +GK L + ++ + D D ++ E AG +S + F ES E G++ E
Sbjct: 254 CNIVLIGMPSAGKTTIGKMLENRMQKEFIDLDDIIIEKAG-KSIPEIFEESGEAGFRAIE 312
Query: 154 TEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
TE ++S + ++ G G ++ N+ LR +GI+++ID
Sbjct: 313 TEAAIEVSKLNNKIIATGGGTIKHKVNMDYLRQNGITIFID 353
>gi|430376185|ref|ZP_19430588.1| shikimate kinase [Moraxella macacae 0408225]
gi|429541416|gb|ELA09444.1| shikimate kinase [Moraxella macacae 0408225]
Length = 196
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+ L+G A KT +GK LA L Y +FDSD + E G S + F + E G++Q E+
Sbjct: 10 IVLIGPMGAGKTTIGKLLASQLGYRFFDSDHEI-ERVSGASVSWIFDKEGEMGFRQRESR 68
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWI 192
L +L+ ++V+ G GAV + N A L+ GI +++
Sbjct: 69 TLDELTQCQQVVLATGGGAVMTPLNQAYLKRGIVIYL 105
>gi|373452094|ref|ZP_09544012.1| shikimate 5-dehydrogenase [Eubacterium sp. 3_1_31]
gi|371967526|gb|EHO84997.1| shikimate 5-dehydrogenase [Eubacterium sp. 3_1_31]
Length = 421
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 61/104 (58%), Gaps = 2/104 (1%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
+K ++ L+GM ++ KT +GK LA ++ + D D + E AG +S + F ES E G++
Sbjct: 251 MKRCNIVLIGMPSSGKTTIGKMLAKRMQKEFIDLDDKIIEKAG-KSIPEIFTESGEAGFR 309
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
ETEV +L+ ++ G G V+ N+ LR +GI+++ID
Sbjct: 310 AIETEVAIELAKTNNKIIATGGGTVKHKVNMDYLRQNGITIFID 353
>gi|304388334|ref|ZP_07370447.1| shikimate kinase [Neisseria meningitidis ATCC 13091]
gi|385339442|ref|YP_005893314.1| shikimate kinase [Neisseria meningitidis G2136]
gi|416164228|ref|ZP_11607160.1| shikimate kinase [Neisseria meningitidis N1568]
gi|416179598|ref|ZP_11611034.1| shikimate kinase [Neisseria meningitidis M6190]
gi|416193192|ref|ZP_11617069.1| shikimate kinase [Neisseria meningitidis ES14902]
gi|416207532|ref|ZP_11620930.1| shikimate kinase [Neisseria meningitidis 961-5945]
gi|416207609|ref|ZP_11620949.1| shikimate kinase [Neisseria meningitidis 961-5945]
gi|416207661|ref|ZP_11620967.1| shikimate kinase [Neisseria meningitidis 961-5945]
gi|421541107|ref|ZP_15987237.1| shikimate kinase [Neisseria meningitidis 93004]
gi|421547171|ref|ZP_15993209.1| shikimate kinase [Neisseria meningitidis NM183]
gi|421553376|ref|ZP_15999339.1| shikimate kinase [Neisseria meningitidis NM576]
gi|421562701|ref|ZP_16008524.1| shikimate kinase [Neisseria meningitidis NM2795]
gi|421906296|ref|ZP_16336196.1| Shikimate kinase [Neisseria meningitidis alpha704]
gi|433467856|ref|ZP_20425305.1| shikimate kinase family protein [Neisseria meningitidis 87255]
gi|433469942|ref|ZP_20427350.1| shikimate kinase family protein [Neisseria meningitidis 98080]
gi|433474128|ref|ZP_20431484.1| shikimate kinase family protein [Neisseria meningitidis 97021]
gi|433481503|ref|ZP_20438770.1| shikimate kinase family protein [Neisseria meningitidis 2006087]
gi|433484565|ref|ZP_20441784.1| shikimate kinase family protein [Neisseria meningitidis 2002038]
gi|433485552|ref|ZP_20442755.1| shikimate kinase family protein [Neisseria meningitidis 97014]
gi|433493165|ref|ZP_20450251.1| shikimate kinase family protein [Neisseria meningitidis NM586]
gi|433495249|ref|ZP_20452311.1| shikimate kinase family protein [Neisseria meningitidis NM762]
gi|433497381|ref|ZP_20454410.1| shikimate kinase family protein [Neisseria meningitidis M7089]
gi|433497967|ref|ZP_20454983.1| shikimate kinase family protein [Neisseria meningitidis M7124]
gi|433501469|ref|ZP_20458450.1| shikimate kinase family protein [Neisseria meningitidis NM174]
gi|433503547|ref|ZP_20460503.1| shikimate kinase family protein [Neisseria meningitidis NM126]
gi|304337651|gb|EFM03807.1| shikimate kinase [Neisseria meningitidis ATCC 13091]
gi|325127560|gb|EGC50483.1| shikimate kinase [Neisseria meningitidis N1568]
gi|325131460|gb|EGC54167.1| shikimate kinase [Neisseria meningitidis M6190]
gi|325137567|gb|EGC60148.1| shikimate kinase [Neisseria meningitidis ES14902]
gi|325141615|gb|EGC64077.1| shikimate kinase [Neisseria meningitidis 961-5945]
gi|325141648|gb|EGC64109.1| shikimate kinase [Neisseria meningitidis 961-5945]
gi|325141681|gb|EGC64141.1| shikimate kinase [Neisseria meningitidis 961-5945]
gi|325197686|gb|ADY93142.1| shikimate kinase [Neisseria meningitidis G2136]
gi|393292597|emb|CCI72115.1| Shikimate kinase [Neisseria meningitidis alpha704]
gi|402315900|gb|EJU51454.1| shikimate kinase [Neisseria meningitidis 93004]
gi|402321534|gb|EJU57007.1| shikimate kinase [Neisseria meningitidis NM183]
gi|402328284|gb|EJU63661.1| shikimate kinase [Neisseria meningitidis NM576]
gi|402342085|gb|EJU77254.1| shikimate kinase [Neisseria meningitidis NM2795]
gi|432201408|gb|ELK57489.1| shikimate kinase family protein [Neisseria meningitidis 87255]
gi|432201535|gb|ELK57615.1| shikimate kinase family protein [Neisseria meningitidis 98080]
gi|432208007|gb|ELK63989.1| shikimate kinase family protein [Neisseria meningitidis 97021]
gi|432218260|gb|ELK74123.1| shikimate kinase family protein [Neisseria meningitidis 2006087]
gi|432219651|gb|ELK75487.1| shikimate kinase family protein [Neisseria meningitidis 2002038]
gi|432224041|gb|ELK79814.1| shikimate kinase family protein [Neisseria meningitidis 97014]
gi|432226768|gb|ELK82491.1| shikimate kinase family protein [Neisseria meningitidis NM586]
gi|432228573|gb|ELK84272.1| shikimate kinase family protein [Neisseria meningitidis NM762]
gi|432232251|gb|ELK87899.1| shikimate kinase family protein [Neisseria meningitidis M7089]
gi|432233310|gb|ELK88938.1| shikimate kinase family protein [Neisseria meningitidis NM174]
gi|432236734|gb|ELK92338.1| shikimate kinase family protein [Neisseria meningitidis M7124]
gi|432239017|gb|ELK94577.1| shikimate kinase family protein [Neisseria meningitidis NM126]
Length = 170
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 72/137 (52%), Gaps = 4/137 (2%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+ L+G+ A KT LG+ +A L Y ++DSD + AA G F E+G++ ET
Sbjct: 8 LILIGLMGAGKTTLGRQMAQRLDYRFYDSDHEI-AAAAGVPIPTIFEMEGEQGFRSRETA 66
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVPPGMVARMDHSGFPESEVLP 214
+LK+L + +V+ G GAV N AL+R G +++ PP ++ ++ + S L
Sbjct: 67 ILKKLVILPHIVLSTGGGAVLKEENRALIRKSGTVVYLHAPPEIL--LERTRCDNSRPLL 124
Query: 215 QLFALYKEMRDGYATAD 231
Q+ ++R+ YA D
Sbjct: 125 QVADPLAKLRELYAARD 141
>gi|121634272|ref|YP_974517.1| shikimate kinase [Neisseria meningitidis FAM18]
gi|120865978|emb|CAM09715.1| putative shikimate kinase [Neisseria meningitidis FAM18]
Length = 171
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 72/138 (52%), Gaps = 4/138 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+ L+G+ A KT LG+ +A L Y ++DSD + AA G F E+G++ ET
Sbjct: 8 KLILIGLMGAGKTTLGRQMAQRLDYRFYDSDHEI-AAAAGVPIPTIFEMEGEQGFRSRET 66
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVPPGMVARMDHSGFPESEVL 213
+LK+L + +V+ G GAV N AL+R G +++ PP ++ ++ + S L
Sbjct: 67 AILKKLVILPHIVLSTGGGAVLKEENRALIRKSGTVVYLHAPPEIL--LERTRCDNSRPL 124
Query: 214 PQLFALYKEMRDGYATAD 231
Q+ ++R+ YA D
Sbjct: 125 LQVADPLAKLRELYAARD 142
>gi|114327280|ref|YP_744437.1| 3-dehydroquinate synthase [Granulibacter bethesdensis CGDNIH1]
gi|114315454|gb|ABI61514.1| shikimate kinase [Granulibacter bethesdensis CGDNIH1]
Length = 590
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 98/202 (48%), Gaps = 15/202 (7%)
Query: 41 TSLQYSIISRKPRITTRSIADDTTSNTVTKVAAEDPSFAVKKKAADISTELKGTSVFLVG 100
+SL I+ ++ R ++ S T+T+ +A PS + + L+G S+ LVG
Sbjct: 3 SSLSLPIMEKRERGGQNRVSV-LASATMTRNSALAPSL---RDSVTPPAWLQGRSIVLVG 58
Query: 101 MNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEVLKQL 160
+ A KT +G+ LA L + D+D+ + E A G S A+ F E G++Q E V+++L
Sbjct: 59 LMGAGKTSIGRRLAARLGMPFRDADAEI-ERAAGCSVAEIFARHGESGFRQGERRVVRRL 117
Query: 161 SSMGRLVVCAGNGAVQSSANLALLRHG-ISLWIDVP-PGMVARMDHSGFPESEVLPQ--- 215
S LV+ G GA ++R G +S+W+ P ++ R+ SG +L Q
Sbjct: 118 LSEEPLVLATGGGAFMDPETRRVIREGAVSIWLRCRLPVLLKRV--SGRTHRPLLNQGDP 175
Query: 216 ---LFALYKEMRDGYATADVTV 234
L L E YA AD+ V
Sbjct: 176 ADILQRLMNERHPVYAEADLIV 197
>gi|422110913|ref|ZP_16380768.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|309378401|emb|CBX22954.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 170
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 71/137 (51%), Gaps = 4/137 (2%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+ L+G+ A KT LG+ +A L Y ++DSD + AA G F E+G++ ET
Sbjct: 8 LILIGLMGAGKTTLGRQMAQRLDYRFYDSDHEI-AAAAGVPIPTIFEMEGERGFRSRETA 66
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVPPGMVARMDHSGFPESEVLP 214
+LK+L + +V+ G GAV N AL+R G +++ PP + ++ + S L
Sbjct: 67 ILKKLIVLPHIVLSTGGGAVLKEENRALIRKSGTVVYLHAPPETL--LERTRCDNSRPLL 124
Query: 215 QLFALYKEMRDGYATAD 231
Q+ ++R+ YA D
Sbjct: 125 QVADPLGKLRELYAARD 141
>gi|340778412|ref|ZP_08698355.1| shikimate kinase [Acetobacter aceti NBRC 14818]
Length = 588
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 80/173 (46%), Gaps = 20/173 (11%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
L G S+ L+G+ A K+ +G+ LA L + D+D+ + E A G S FR E+ ++
Sbjct: 33 LCGRSILLIGLMGAGKSTIGRRLAQRLGLGFVDADAEI-ERAAGCSINDVFRLYGEEAFR 91
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVP--------PGMVAR 201
E VLK+L V+ G GA + AL+R IS+W+ P G R
Sbjct: 92 DGERRVLKRLIDGPSRVIATGGGAFMNEQTRALIRERAISVWLRCPLHVLLKRVSGRTHR 151
Query: 202 MDHSGFPESEVLPQLFALYKEMRDGYATADVTVSLQKVASQLGYDDLDAVTTE 254
+G +VL +L + + YA AD+ V Q G D++D TT
Sbjct: 152 PLLNGPKPRDVLERLMIIRHPV---YAEADIIV-------QCGEDNVDNATTR 194
>gi|255034035|ref|YP_003084656.1| shikimate kinase [Dyadobacter fermentans DSM 18053]
gi|254946791|gb|ACT91491.1| Shikimate kinase [Dyadobacter fermentans DSM 18053]
Length = 167
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 64/108 (59%), Gaps = 2/108 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ LVGM ++ KT LGK LA AL Y + D D L+ E G + F + E +++ E+
Sbjct: 3 NIILVGMMSSGKTTLGKKLARALNYQFVDLDKLI-EKDQGMEISSIFAQRGEAYFREVES 61
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMVAR 201
+LK+ +S +V+ +G G N+ +++ GIS+++DVP G +AR
Sbjct: 62 RILKETASQKGIVLASGGGTPCFFDNMEVIKAMGISIFLDVPAGDLAR 109
>gi|59800554|ref|YP_207266.1| shikimate kinase [Neisseria gonorrhoeae FA 1090]
gi|240013408|ref|ZP_04720321.1| shikimate kinase [Neisseria gonorrhoeae DGI18]
gi|240015849|ref|ZP_04722389.1| shikimate kinase [Neisseria gonorrhoeae FA6140]
gi|240120478|ref|ZP_04733440.1| shikimate kinase [Neisseria gonorrhoeae PID24-1]
gi|254493003|ref|ZP_05106174.1| shikimate kinase [Neisseria gonorrhoeae 1291]
gi|75432610|sp|Q5FAD3.1|AROK_NEIG1 RecName: Full=Shikimate kinase; Short=SK
gi|59717449|gb|AAW88854.1| putative shikimate kinase [Neisseria gonorrhoeae FA 1090]
gi|226512043|gb|EEH61388.1| shikimate kinase [Neisseria gonorrhoeae 1291]
Length = 170
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 71/137 (51%), Gaps = 4/137 (2%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+ L+G+ A KT LG+ +A L Y ++DSD + AA G F E+G++ ET
Sbjct: 8 LILIGLMGAGKTTLGRQMAQRLDYRFYDSDHEI-AAAAGVPIPTIFEMEGEQGFRSRETA 66
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVPPGMVARMDHSGFPESEVLP 214
+LK+L + +V+ G GAV N AL+R G +++ PP + ++ + S L
Sbjct: 67 ILKKLIVLPHIVLSTGGGAVLKEENRALIRKSGTVVYLHAPPETL--LERTRCDNSRPLL 124
Query: 215 QLFALYKEMRDGYATAD 231
Q+ ++R+ YA D
Sbjct: 125 QVADPLAKLRELYAARD 141
>gi|15677649|ref|NP_274810.1| shikimate kinase [Neisseria meningitidis MC58]
gi|161869407|ref|YP_001598574.1| shikimate kinase [Neisseria meningitidis 053442]
gi|218767604|ref|YP_002342116.1| shikimate kinase [Neisseria meningitidis Z2491]
gi|254804372|ref|YP_003082593.1| shikimate kinase [Neisseria meningitidis alpha14]
gi|385329059|ref|YP_005883362.1| putative shikimate kinase [Neisseria meningitidis alpha710]
gi|385337450|ref|YP_005891323.1| shikimate kinase [Neisseria meningitidis WUE 2594]
gi|385341336|ref|YP_005895207.1| shikimate kinase [Neisseria meningitidis M01-240149]
gi|385853871|ref|YP_005900385.1| shikimate kinase [Neisseria meningitidis H44/76]
gi|385855828|ref|YP_005902341.1| shikimate kinase [Neisseria meningitidis M01-240355]
gi|385856634|ref|YP_005903146.1| shikimate kinase [Neisseria meningitidis NZ-05/33]
gi|416184647|ref|ZP_11613081.1| shikimate kinase [Neisseria meningitidis M13399]
gi|416189027|ref|ZP_11615043.1| shikimate kinase [Neisseria meningitidis M0579]
gi|416198479|ref|ZP_11618955.1| shikimate kinase [Neisseria meningitidis CU385]
gi|416214544|ref|ZP_11622940.1| shikimate kinase [Neisseria meningitidis M01-240013]
gi|421538776|ref|ZP_15984948.1| putative shikimate kinase [Neisseria meningitidis 93003]
gi|421550489|ref|ZP_15996493.1| putative shikimate kinase [Neisseria meningitidis 69166]
gi|421555515|ref|ZP_16001445.1| putative shikimate kinase [Neisseria meningitidis 98008]
gi|421557768|ref|ZP_16003666.1| putative shikimate kinase [Neisseria meningitidis 80179]
gi|421566106|ref|ZP_16011865.1| putative shikimate kinase [Neisseria meningitidis NM3081]
gi|427827728|ref|ZP_18994752.1| shikimate kinase family protein [Neisseria meningitidis H44/76]
gi|433472438|ref|ZP_20429813.1| shikimate kinase family protein [Neisseria meningitidis 68094]
gi|433476230|ref|ZP_20433565.1| shikimate kinase family protein [Neisseria meningitidis 88050]
gi|433478777|ref|ZP_20436081.1| shikimate kinase family protein [Neisseria meningitidis 70012]
gi|433480380|ref|ZP_20437662.1| shikimate kinase family protein [Neisseria meningitidis 63041]
gi|433505623|ref|ZP_20462556.1| shikimate kinase family protein [Neisseria meningitidis 9506]
gi|433507802|ref|ZP_20464700.1| shikimate kinase family protein [Neisseria meningitidis 9757]
gi|433509996|ref|ZP_20466853.1| shikimate kinase family protein [Neisseria meningitidis 12888]
gi|433512007|ref|ZP_20468822.1| shikimate kinase family protein [Neisseria meningitidis 4119]
gi|433514118|ref|ZP_20470902.1| shikimate kinase family protein [Neisseria meningitidis 63049]
gi|433516342|ref|ZP_20473105.1| shikimate kinase family protein [Neisseria meningitidis 2004090]
gi|433518242|ref|ZP_20474982.1| shikimate kinase family protein [Neisseria meningitidis 96023]
gi|433520489|ref|ZP_20477201.1| shikimate kinase family protein [Neisseria meningitidis 65014]
gi|433523523|ref|ZP_20480191.1| shikimate kinase family protein [Neisseria meningitidis 97020]
gi|433526787|ref|ZP_20483410.1| shikimate kinase family protein [Neisseria meningitidis 69096]
gi|433527578|ref|ZP_20484190.1| shikimate kinase family protein [Neisseria meningitidis NM3652]
gi|433529779|ref|ZP_20486374.1| shikimate kinase family protein [Neisseria meningitidis NM3642]
gi|433531966|ref|ZP_20488533.1| shikimate kinase family protein [Neisseria meningitidis 2007056]
gi|433535221|ref|ZP_20491754.1| shikimate kinase family protein [Neisseria meningitidis 2001212]
gi|433537302|ref|ZP_20493798.1| shikimate kinase family protein [Neisseria meningitidis 77221]
gi|433538323|ref|ZP_20494807.1| shikimate kinase family protein [Neisseria meningitidis 70030]
gi|433541721|ref|ZP_20498164.1| shikimate kinase family protein [Neisseria meningitidis 63006]
gi|54036756|sp|P63600.1|AROK_NEIMB RecName: Full=Putative shikimate kinase; Short=SK
gi|54040825|sp|P63599.1|AROK_NEIMA RecName: Full=Putative shikimate kinase; Short=SK
gi|189046333|sp|A9M1U5.1|AROK_NEIM0 RecName: Full=Shikimate kinase; Short=SK
gi|7227066|gb|AAF42148.1| shikimate kinase [Neisseria meningitidis MC58]
gi|121051612|emb|CAM07912.1| putative shikimate kinase [Neisseria meningitidis Z2491]
gi|161594960|gb|ABX72620.1| shikimate kinase [Neisseria meningitidis 053442]
gi|254667914|emb|CBA04077.1| Shikimate kinase [Neisseria meningitidis alpha14]
gi|308389911|gb|ADO32231.1| putative shikimate kinase [Neisseria meningitidis alpha710]
gi|316984414|gb|EFV63387.1| shikimate kinase family protein [Neisseria meningitidis H44/76]
gi|319409864|emb|CBY90177.1| shikimate kinase (SK) [Neisseria meningitidis WUE 2594]
gi|325133589|gb|EGC56250.1| shikimate kinase [Neisseria meningitidis M13399]
gi|325135597|gb|EGC58214.1| shikimate kinase [Neisseria meningitidis M0579]
gi|325139634|gb|EGC62173.1| shikimate kinase [Neisseria meningitidis CU385]
gi|325143816|gb|EGC66132.1| shikimate kinase [Neisseria meningitidis M01-240013]
gi|325200875|gb|ADY96330.1| shikimate kinase [Neisseria meningitidis H44/76]
gi|325201542|gb|ADY96996.1| shikimate kinase [Neisseria meningitidis M01-240149]
gi|325204769|gb|ADZ00223.1| shikimate kinase [Neisseria meningitidis M01-240355]
gi|325207523|gb|ADZ02975.1| shikimate kinase [Neisseria meningitidis NZ-05/33]
gi|389606501|emb|CCA45414.1| shikimate kinase [Neisseria meningitidis alpha522]
gi|402315483|gb|EJU51046.1| putative shikimate kinase [Neisseria meningitidis 93003]
gi|402329752|gb|EJU65106.1| putative shikimate kinase [Neisseria meningitidis 98008]
gi|402329844|gb|EJU65195.1| putative shikimate kinase [Neisseria meningitidis 69166]
gi|402333643|gb|EJU68943.1| putative shikimate kinase [Neisseria meningitidis 80179]
gi|402341455|gb|EJU76633.1| putative shikimate kinase [Neisseria meningitidis NM3081]
gi|432206093|gb|ELK62107.1| shikimate kinase family protein [Neisseria meningitidis 68094]
gi|432208085|gb|ELK64064.1| shikimate kinase family protein [Neisseria meningitidis 88050]
gi|432212577|gb|ELK68514.1| shikimate kinase family protein [Neisseria meningitidis 70012]
gi|432214151|gb|ELK70057.1| shikimate kinase family protein [Neisseria meningitidis 63041]
gi|432239356|gb|ELK94910.1| shikimate kinase family protein [Neisseria meningitidis 9757]
gi|432239510|gb|ELK95062.1| shikimate kinase family protein [Neisseria meningitidis 9506]
gi|432244934|gb|ELL00413.1| shikimate kinase family protein [Neisseria meningitidis 12888]
gi|432245553|gb|ELL01021.1| shikimate kinase family protein [Neisseria meningitidis 4119]
gi|432246005|gb|ELL01467.1| shikimate kinase family protein [Neisseria meningitidis 63049]
gi|432251463|gb|ELL06830.1| shikimate kinase family protein [Neisseria meningitidis 2004090]
gi|432251980|gb|ELL07340.1| shikimate kinase family protein [Neisseria meningitidis 96023]
gi|432252155|gb|ELL07513.1| shikimate kinase family protein [Neisseria meningitidis 65014]
gi|432259078|gb|ELL14354.1| shikimate kinase family protein [Neisseria meningitidis 69096]
gi|432261580|gb|ELL16828.1| shikimate kinase family protein [Neisseria meningitidis 97020]
gi|432266478|gb|ELL21661.1| shikimate kinase family protein [Neisseria meningitidis NM3652]
gi|432268611|gb|ELL23778.1| shikimate kinase family protein [Neisseria meningitidis 2007056]
gi|432268871|gb|ELL24036.1| shikimate kinase family protein [Neisseria meningitidis NM3642]
gi|432270173|gb|ELL25317.1| shikimate kinase family protein [Neisseria meningitidis 2001212]
gi|432271725|gb|ELL26847.1| shikimate kinase family protein [Neisseria meningitidis 77221]
gi|432275194|gb|ELL30270.1| shikimate kinase family protein [Neisseria meningitidis 70030]
gi|432275924|gb|ELL30989.1| shikimate kinase family protein [Neisseria meningitidis 63006]
Length = 170
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 71/137 (51%), Gaps = 4/137 (2%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+ L+G+ A KT LG+ +A L Y ++DSD + AA G F E+G++ ET
Sbjct: 8 LILIGLMGAGKTTLGRQMAQRLDYRFYDSDHEI-AAAAGVPIPTIFEMEGEQGFRSRETA 66
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVPPGMVARMDHSGFPESEVLP 214
+LK+L + +V+ G GAV N AL+R G +++ PP + ++ + S L
Sbjct: 67 ILKKLVILPHIVLSTGGGAVLKEENRALIRKSGTVVYLHAPPETL--LERTRCDNSRPLL 124
Query: 215 QLFALYKEMRDGYATAD 231
Q+ ++R+ YA D
Sbjct: 125 QVADPLAKLRELYAARD 141
>gi|261401671|ref|ZP_05987796.1| shikimate kinase [Neisseria lactamica ATCC 23970]
gi|269208255|gb|EEZ74710.1| shikimate kinase [Neisseria lactamica ATCC 23970]
Length = 170
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 71/137 (51%), Gaps = 4/137 (2%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+ L+G+ A KT LG+ +A L Y ++DSD + AA G F E+G++ ET
Sbjct: 8 LILIGLMGAGKTTLGRQMAQRLDYRFYDSDHEI-AAAAGVPIPTIFEMEGEQGFRSRETA 66
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVPPGMVARMDHSGFPESEVLP 214
+LK+L + +V+ G GAV N AL+R G +++ PP + ++ + S L
Sbjct: 67 ILKKLIVLPHIVLSTGGGAVLKEENRALIRKSGTVVYLHAPPETL--LERTRCDNSRPLL 124
Query: 215 QLFALYKEMRDGYATAD 231
Q+ ++R+ YA D
Sbjct: 125 QVADPLGKLRELYAARD 141
>gi|194097716|ref|YP_002000757.1| shikimate kinase [Neisseria gonorrhoeae NCCP11945]
gi|268594081|ref|ZP_06128248.1| bifunctional 3-dehydroquinate synthase/shikimate kinase [Neisseria
gonorrhoeae 35/02]
gi|268596133|ref|ZP_06130300.1| bifunctional 3-dehydroquinate synthase/shikimate kinase [Neisseria
gonorrhoeae FA19]
gi|268598257|ref|ZP_06132424.1| 3-dehydroquinate synthase [Neisseria gonorrhoeae MS11]
gi|268600606|ref|ZP_06134773.1| 3-dehydroquinate synthase [Neisseria gonorrhoeae PID18]
gi|268602795|ref|ZP_06136962.1| 3-dehydroquinate synthase [Neisseria gonorrhoeae PID1]
gi|268681390|ref|ZP_06148252.1| 3-dehydroquinate synthase [Neisseria gonorrhoeae PID332]
gi|268683557|ref|ZP_06150419.1| 3-dehydroquinate synthase [Neisseria gonorrhoeae SK-92-679]
gi|268685859|ref|ZP_06152721.1| 3-dehydroquinate synthase [Neisseria gonorrhoeae SK-93-1035]
gi|293397708|ref|ZP_06641914.1| shikimate kinase [Neisseria gonorrhoeae F62]
gi|193933006|gb|ACF28830.1| AroK [Neisseria gonorrhoeae NCCP11945]
gi|268547470|gb|EEZ42888.1| bifunctional 3-dehydroquinate synthase/shikimate kinase [Neisseria
gonorrhoeae 35/02]
gi|268549921|gb|EEZ44940.1| bifunctional 3-dehydroquinate synthase/shikimate kinase [Neisseria
gonorrhoeae FA19]
gi|268582388|gb|EEZ47064.1| 3-dehydroquinate synthase [Neisseria gonorrhoeae MS11]
gi|268584737|gb|EEZ49413.1| 3-dehydroquinate synthase [Neisseria gonorrhoeae PID18]
gi|268586926|gb|EEZ51602.1| 3-dehydroquinate synthase [Neisseria gonorrhoeae PID1]
gi|268621674|gb|EEZ54074.1| 3-dehydroquinate synthase [Neisseria gonorrhoeae PID332]
gi|268623841|gb|EEZ56241.1| 3-dehydroquinate synthase [Neisseria gonorrhoeae SK-92-679]
gi|268626143|gb|EEZ58543.1| 3-dehydroquinate synthase [Neisseria gonorrhoeae SK-93-1035]
gi|291611654|gb|EFF40723.1| shikimate kinase [Neisseria gonorrhoeae F62]
Length = 171
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 71/137 (51%), Gaps = 4/137 (2%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+ L+G+ A KT LG+ +A L Y ++DSD + AA G F E+G++ ET
Sbjct: 9 LILIGLMGAGKTTLGRQMAQRLDYRFYDSDHEI-AAAAGVPIPTIFEMEGEQGFRSRETA 67
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVPPGMVARMDHSGFPESEVLP 214
+LK+L + +V+ G GAV N AL+R G +++ PP + ++ + S L
Sbjct: 68 ILKKLIVLPHIVLSTGGGAVLKEENRALIRKSGTVVYLHAPPETL--LERTRCDNSRPLL 125
Query: 215 QLFALYKEMRDGYATAD 231
Q+ ++R+ YA D
Sbjct: 126 QVADPLAKLRELYAARD 142
>gi|291044585|ref|ZP_06570294.1| shikimate kinase [Neisseria gonorrhoeae DGI2]
gi|291011479|gb|EFE03475.1| shikimate kinase [Neisseria gonorrhoeae DGI2]
Length = 195
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 71/137 (51%), Gaps = 4/137 (2%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+ L+G+ A KT LG+ +A L Y ++DSD + AA G F E+G++ ET
Sbjct: 8 LILIGLMGAGKTTLGRQMAQRLDYRFYDSDHEI-AAAAGVPIPTIFEMEGEQGFRSRETA 66
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVPPGMVARMDHSGFPESEVLP 214
+LK+L + +V+ G GAV N AL+R G +++ PP + ++ + S L
Sbjct: 67 ILKKLIVLPHIVLSTGGGAVLKEENRALIRKSGTVVYLHAPPETL--LERTRCDNSRPLL 124
Query: 215 QLFALYKEMRDGYATAD 231
Q+ ++R+ YA D
Sbjct: 125 QVADPLAKLRELYAARD 141
>gi|436839855|ref|YP_007324233.1| Shikimate kinase [Desulfovibrio hydrothermalis AM13 = DSM 14728]
gi|432168761|emb|CCO22127.1| Shikimate kinase [Desulfovibrio hydrothermalis AM13 = DSM 14728]
Length = 175
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 81/164 (49%), Gaps = 16/164 (9%)
Query: 94 TSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDE-KGYQQA 152
+ V+L+G KT +G+ LA+ L++ ++DSDSL+ E AG E A A+ ES G++
Sbjct: 2 SRVYLIGPRACGKTTVGRILAEKLKFKFYDSDSLIVERAGCEIA--AYVESHGWSGFRDL 59
Query: 153 ETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLW-----------IDVPPGMVAR 201
E+ VL LS V+ G G V NL +LR +++ + V P R
Sbjct: 60 ESAVLNGLSGKSEAVISCGGGIVVREENLFILRRNYTVYLKTDVQVLADRLSVEPEHGQR 119
Query: 202 MDHSGFPESEVLPQLFALYKEMRDGYAT--ADVTVSLQKVASQL 243
+G P E + Q+ +++ G AT D ++ ++ +Q+
Sbjct: 120 PSLTGKPLVEEIQQVLDEREDLYSGCATYIVDGAAAVDEICNQI 163
>gi|325265677|ref|ZP_08132366.1| shikimate kinase [Kingella denitrificans ATCC 33394]
gi|324982808|gb|EGC18431.1| shikimate kinase [Kingella denitrificans ATCC 33394]
Length = 177
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 63/103 (61%), Gaps = 2/103 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FL+G+ A KT LG+ LA L+Y ++DSD+++ + G + F E+G++Q E+
Sbjct: 11 NLFLIGLMGAGKTTLGRQLAGHLQYPFYDSDNVICQRT-GVNIPTIFEIEGEQGFRQRES 69
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVPP 196
V+++L++M +V+ G GAV N LR+ G +++ V P
Sbjct: 70 MVIQELTAMDNVVLATGGGAVLREENRHCLRNRGTVIYLHVLP 112
>gi|408675274|ref|YP_006875022.1| Shikimate kinase [Emticicia oligotrophica DSM 17448]
gi|387856898|gb|AFK04995.1| Shikimate kinase [Emticicia oligotrophica DSM 17448]
Length = 172
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 78/151 (51%), Gaps = 11/151 (7%)
Query: 94 TSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAE 153
T++FL+GM ++ K+ LG+ +A +L Y + D D L E A G+ A+ F + E+ +++ E
Sbjct: 3 TNIFLIGMPSSGKSTLGRQIAKSLGYEFVDLD-LRIEIAEGKKIAEIFSLNGEEYFRKVE 61
Query: 154 TEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGM-VARMDHS------ 205
+ LK++ ++VV G G L ++ +GIS+++DV P M V RM S
Sbjct: 62 NQQLKKIIKDSKMVVATGGGTPCYYDGLDYIKENGISIFLDVKPEMLVERMKVSKKNDRP 121
Query: 206 --GFPESEVLPQLFALYKEMRDGYATADVTV 234
+L + Y E Y AD+TV
Sbjct: 122 LFDLESKSLLDTISQTYNERLSTYQKADITV 152
>gi|433488980|ref|ZP_20446130.1| shikimate kinase family protein [Neisseria meningitidis M13255]
gi|432221309|gb|ELK77120.1| shikimate kinase family protein [Neisseria meningitidis M13255]
Length = 170
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 71/137 (51%), Gaps = 4/137 (2%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+ L+G+ A KT LG+ +A L Y ++DSD + AAG F E+G++ ET
Sbjct: 8 LILIGLMGAGKTTLGRQMAQRLDYRFYDSDHEIASAAG-VPIPTIFEMEGEQGFRSRETA 66
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVPPGMVARMDHSGFPESEVLP 214
+LK+L + +V+ G GAV N AL+R G +++ PP + ++ + S L
Sbjct: 67 ILKKLVILPHIVLSTGGGAVLKEENRALIRKSGTVVYLHAPPETL--LERTRCDNSRPLL 124
Query: 215 QLFALYKEMRDGYATAD 231
Q+ ++R+ YA D
Sbjct: 125 QVADPLAKLRELYAARD 141
>gi|116619905|ref|YP_822061.1| shikimate kinase [Candidatus Solibacter usitatus Ellin6076]
gi|116223067|gb|ABJ81776.1| shikimate kinase [Candidatus Solibacter usitatus Ellin6076]
Length = 176
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 76/153 (49%), Gaps = 14/153 (9%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+++VG A K+ +G+ LA L + +FDSD + E A S A F E E +++ ET
Sbjct: 10 GIYVVGFMGAGKSTVGRHLAHHLGWSFFDSDEEI-ERAEKASIASIFEERGEAEFRRIET 68
Query: 155 EVLKQ---LSSMGRLVVCA-GNGAVQSSANLALLR-HGISLWIDVPPGM----VARMDHS 205
E+++Q GR V A G GA AN LL +GI++W+D P + VA+ H
Sbjct: 69 EIIRQHVGWIERGRPAVLALGGGAYAQPANRQLLENNGITVWLDCPFELVQQRVAQATHR 128
Query: 206 GFPESEVLPQLF-ALYKEMRDGYATADVTVSLQ 237
P+ F ALY R Y A V V ++
Sbjct: 129 PLARD---PEAFAALYHARRADYGRAAVQVVIE 158
>gi|293400584|ref|ZP_06644729.1| fusion: chorismate mutase and shikimate 5-dehydrogenase
[Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291305610|gb|EFE46854.1| fusion: chorismate mutase and shikimate 5-dehydrogenase
[Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 421
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 59/101 (58%), Gaps = 2/101 (1%)
Query: 94 TSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAE 153
++ L+GM +A KT +GK L + ++ + D D + E AG +S + F ES E G++ E
Sbjct: 254 CNIVLIGMPSAGKTTIGKMLEERMQKDFIDLDDKIIEKAG-KSIPEIFSESGEAGFRAIE 312
Query: 154 TEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
TEV +L+ ++ G G ++ N+ LR +GI+++ID
Sbjct: 313 TEVAIELAKTNNKIIATGGGTIKHKVNMDYLRQNGITIFID 353
>gi|257454915|ref|ZP_05620163.1| shikimate kinase [Enhydrobacter aerosaccus SK60]
gi|257447625|gb|EEV22620.1| shikimate kinase [Enhydrobacter aerosaccus SK60]
Length = 178
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+ L+G A KT +GK LA L + ++DSD + E G S + F + E G++Q ET
Sbjct: 10 IILIGPMGAGKTTIGKLLAQQLGFTFYDSDQEI-ERVSGASISWIFEKEGEVGFRQRETR 68
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWI 192
VL +L+ + +V+ G GAV + N L+ GI +++
Sbjct: 69 VLDKLTHLDHVVLATGGGAVTIAENHHFLKRGIIIYL 105
>gi|114762818|ref|ZP_01442250.1| shikimate kinase [Pelagibaca bermudensis HTCC2601]
gi|114544428|gb|EAU47435.1| shikimate kinase [Roseovarius sp. HTCC2601]
Length = 192
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 76/147 (51%), Gaps = 7/147 (4%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+V LVGM A KT +GK LA AL + DSD+ + E A + A+ F E ++Q E+
Sbjct: 16 TVVLVGMMGAGKTAVGKALAAALHVPFRDSDAEI-ELAANMTIAEIFSRDGEPFFRQKES 74
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALL-RHGISLWIDVP-PGMVARMDHSGFPESEV 212
+V+ +L V+ G GA S+AN ++ G+++W+D P + R+ H
Sbjct: 75 QVISRLLDGTPSVLSTGGGAYMSAANRKMITERGVAVWLDAALPVLWNRVKHKNTRPLLR 134
Query: 213 LPQLFALYKEMRDG----YATADVTVS 235
P A +E+ + YA ADVTV+
Sbjct: 135 TPDPHATLREIYEQRVPVYAMADVTVT 161
>gi|385324764|ref|YP_005879203.1| shikimate kinase [Neisseria meningitidis 8013]
gi|416174165|ref|ZP_11609126.1| shikimate kinase [Neisseria meningitidis OX99.30304]
gi|418288948|ref|ZP_12901356.1| shikimate kinase [Neisseria meningitidis NM233]
gi|418291207|ref|ZP_12903247.1| shikimate kinase [Neisseria meningitidis NM220]
gi|421543054|ref|ZP_15989154.1| shikimate kinase [Neisseria meningitidis NM255]
gi|433465796|ref|ZP_20423267.1| shikimate kinase family protein [Neisseria meningitidis NM422]
gi|433491169|ref|ZP_20448282.1| shikimate kinase family protein [Neisseria meningitidis NM418]
gi|254673577|emb|CBA09071.1| shikimate kinase I [Neisseria meningitidis alpha275]
gi|261393151|emb|CAX50763.1| shikimate kinase (SK) [Neisseria meningitidis 8013]
gi|325129553|gb|EGC52377.1| shikimate kinase [Neisseria meningitidis OX99.30304]
gi|372200258|gb|EHP14363.1| shikimate kinase [Neisseria meningitidis NM220]
gi|372200665|gb|EHP14707.1| shikimate kinase [Neisseria meningitidis NM233]
gi|402315816|gb|EJU51372.1| shikimate kinase [Neisseria meningitidis NM255]
gi|432200892|gb|ELK56980.1| shikimate kinase family protein [Neisseria meningitidis NM422]
gi|432225728|gb|ELK81468.1| shikimate kinase family protein [Neisseria meningitidis NM418]
Length = 170
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 71/137 (51%), Gaps = 4/137 (2%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+ L+G+ A KT LG+ +A L Y ++DSD + AAG F E+G++ ET
Sbjct: 8 LILIGLMGAGKTTLGRQMAQRLDYRFYDSDHEIAVAAG-VPIPTIFEMEGEQGFRSRETA 66
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVPPGMVARMDHSGFPESEVLP 214
+LK+L + +V+ G GAV N AL+R G +++ PP + ++ + S L
Sbjct: 67 ILKKLVILPHIVLSTGGGAVLKEENRALIRKSGTVVYLHAPPETL--LERTRCDNSRPLL 124
Query: 215 QLFALYKEMRDGYATAD 231
Q+ ++R+ YA D
Sbjct: 125 QVADPLAKLRELYAARD 141
>gi|262037643|ref|ZP_06011088.1| shikimate kinase [Leptotrichia goodfellowii F0264]
gi|261748323|gb|EEY35717.1| shikimate kinase [Leptotrichia goodfellowii F0264]
Length = 172
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 76/143 (53%), Gaps = 3/143 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L+GM + KT +GK LA + Y ++D+D + E + ++ F E E+ ++ E
Sbjct: 3 NIILIGMPASGKTTVGKLLAKKINYEHYDADRYL-EKNEEKRISEIFSEKGEEYFRNLEE 61
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANL-ALLRHGISLWIDVPPGMVARMDHSGFPESEVL 213
+ LK+LS +++ G GAV+ N+ L ++GI +++ +A+ +H P + +
Sbjct: 62 KYLKELSEKNGVIISTGGGAVKRKENMEELKKNGIIVFLSRKVDDIAKENHKYRPLLQNI 121
Query: 214 PQLFALYKEMRDGYAT-ADVTVS 235
+ LY E + Y AD+TV
Sbjct: 122 ENIHKLYGERIELYRKYADITVE 144
>gi|385851907|ref|YP_005898422.1| shikimate kinase [Neisseria meningitidis M04-240196]
gi|421559782|ref|ZP_16005650.1| shikimate kinase [Neisseria meningitidis 92045]
gi|421561832|ref|ZP_16007669.1| shikimate kinase family protein [Neisseria meningitidis NM2657]
gi|421568301|ref|ZP_16014027.1| shikimate kinase [Neisseria meningitidis NM3001]
gi|433522547|ref|ZP_20479230.1| shikimate kinase family protein [Neisseria meningitidis 61103]
gi|254670034|emb|CBA04828.1| shikimate kinase I [Neisseria meningitidis alpha153]
gi|325206730|gb|ADZ02183.1| shikimate kinase [Neisseria meningitidis M04-240196]
gi|402334548|gb|EJU69832.1| shikimate kinase [Neisseria meningitidis 92045]
gi|402336217|gb|EJU71478.1| shikimate kinase family protein [Neisseria meningitidis NM2657]
gi|402342029|gb|EJU77200.1| shikimate kinase [Neisseria meningitidis NM3001]
gi|432257736|gb|ELL13030.1| shikimate kinase family protein [Neisseria meningitidis 61103]
Length = 170
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 71/137 (51%), Gaps = 4/137 (2%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+ L+G+ A KT LG+ +A L Y ++DSD + AAG F E+G++ ET
Sbjct: 8 LILIGLMGAGKTTLGRQMAQRLDYRFYDSDHEIAVAAG-VPIPTIFEMEGEQGFRSRETA 66
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVPPGMVARMDHSGFPESEVLP 214
+LK+L + +V+ G GAV N AL+R G +++ PP + ++ + S L
Sbjct: 67 ILKKLVILPHIVLSTGGGAVLKEENRALIRKSGTVVYLHAPPETL--LERTRCDNSRPLL 124
Query: 215 QLFALYKEMRDGYATAD 231
Q+ ++R+ YA D
Sbjct: 125 QVADPLAKLRELYAARD 141
>gi|384209708|ref|YP_005595428.1| shikimate kinase [Brachyspira intermedia PWS/A]
gi|343387358|gb|AEM22848.1| shikimate kinase [Brachyspira intermedia PWS/A]
Length = 175
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 60/105 (57%), Gaps = 2/105 (1%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+F+VG+ K+ L K LA+ L Y +D DS + E G + F E+ E ++ E+E
Sbjct: 10 IFIVGLPGCGKSALSKMLAEKLNYDLYDMDSFI-EHKEGRTITNIFAENGEPYFRNIESE 68
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMV 199
VL++LS++ V+ G G V + N +++ G++++ID P ++
Sbjct: 69 VLEELSNLNNAVISTGGGIVLAEKNRNIMKDKGLTIFIDRNPDII 113
>gi|338730285|ref|YP_004659677.1| 3-dehydroquinate synthase [Thermotoga thermarum DSM 5069]
gi|335364636|gb|AEH50581.1| 3-dehydroquinate synthase [Thermotoga thermarum DSM 5069]
Length = 547
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 101/181 (55%), Gaps = 16/181 (8%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
SV L G++ + KT +GK LA+ L +++ D+D LV E K F+ E+G++Q E
Sbjct: 4 SVVLCGLSGSGKTTVGKILAEKLGWFFIDTDQLV-EDTTSMDIPKIFQIYGEEGFRQFEK 62
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALL-RHGISLWIDVPPG-MVARMDH-SGFP--- 208
++++++ + +V+ G GAV + N+ LL ++ + ++++ P +VAR+++ S P
Sbjct: 63 QMVEKVCKLQNVVISIGAGAVTKNENVDLLKKNCVVVFLNAPIDILVARLENDSSRPLLN 122
Query: 209 ---ESEVLPQLFALYKEMRDGY-ATADVTV--SLQ--KVASQLGYDDLDAVTTEDMTLEV 260
SE +L L K+ Y AD+TV SLQ K+A ++ L++ E+ L++
Sbjct: 123 SANTSEKRNKLEVLQKQREPIYRQIADITVDASLQPEKIAREIAR-KLESYGLEERNLDI 181
Query: 261 K 261
+
Sbjct: 182 E 182
>gi|421848539|ref|ZP_16281527.1| shikimate kinase [Acetobacter pasteurianus NBRC 101655]
gi|421851731|ref|ZP_16284424.1| shikimate kinase [Acetobacter pasteurianus subsp. pasteurianus LMG
1262 = NBRC 106471]
gi|371460900|dbj|GAB26730.1| shikimate kinase [Acetobacter pasteurianus NBRC 101655]
gi|371480234|dbj|GAB29627.1| shikimate kinase [Acetobacter pasteurianus subsp. pasteurianus LMG
1262 = NBRC 106471]
Length = 588
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 93 GTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQA 152
G S+ LVG+ A KT +G+ LA L + D+D + E A G S A FR E ++
Sbjct: 48 GRSIVLVGLMGAGKTTIGRPLATRLGLPFVDAD-VEIERAAGCSIADVFRLYGEAAFRDG 106
Query: 153 ETEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVP-PGMVARMD---HSGF 207
E V+++L +V+ G GA S AL+R +S+W+ P P +V R+ H
Sbjct: 107 ERRVIRRLLEGPPMVLATGGGAFMDSTTRALVRERAVSIWLRCPLPVLVRRVSGRTHRPL 166
Query: 208 PES----EVLPQLFALYKEMRDGYATADVTVSLQKVASQLGYDDLDAVTTEDM 256
+ EVL L A+ + YA AD+ V G ++++ TT M
Sbjct: 167 LNTTSPREVLENLMAIRHPV---YAEADIIV-------DCGDNNVEHTTTRVM 209
>gi|158426112|ref|YP_001527404.1| shikimate kinase [Azorhizobium caulinodans ORS 571]
gi|158333001|dbj|BAF90486.1| shikimate kinase [Azorhizobium caulinodans ORS 571]
Length = 212
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 79/165 (47%), Gaps = 7/165 (4%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+ LVGM A K+ +G+ LA L + D+D + E A G S + F E +++ E
Sbjct: 35 CIVLVGMPGAGKSTVGRRLAKRLGLPFLDADEEI-ERAAGMSIPEIFSSRGESEFREGER 93
Query: 155 EVLKQLSSMGRLVVCAGNGA-VQSSANLALLRHGISLWI--DVP---PGMVARMDHSGFP 208
V+ +L G V+ G GA + + A+ R +S+W+ ++P + R D
Sbjct: 94 RVIARLLQTGPCVLATGGGAFMNAETRAAVARQAVSVWLRAEIPVLLRRVRKRADRPLLA 153
Query: 209 ESEVLPQLFALYKEMRDGYATADVTVSLQKVASQLGYDDLDAVTT 253
E + + +L AL D YA ADVTV + A + D++ A T
Sbjct: 154 EGDPVAKLEALLAARGDTYALADVTVESRDTAHETVVDEVVATLT 198
>gi|258541882|ref|YP_003187315.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-01]
gi|384041803|ref|YP_005480547.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-12]
gi|384050318|ref|YP_005477381.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-03]
gi|384053428|ref|YP_005486522.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-07]
gi|384056660|ref|YP_005489327.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-22]
gi|384059301|ref|YP_005498429.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-26]
gi|384062595|ref|YP_005483237.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-32]
gi|384118671|ref|YP_005501295.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256632960|dbj|BAH98935.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-01]
gi|256636017|dbj|BAI01986.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-03]
gi|256639072|dbj|BAI05034.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-07]
gi|256642126|dbj|BAI08081.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-22]
gi|256645181|dbj|BAI11129.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-26]
gi|256648236|dbj|BAI14177.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-32]
gi|256651289|dbj|BAI17223.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256654280|dbj|BAI20207.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-12]
Length = 577
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 93 GTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQA 152
G S+ LVG+ A KT +G+ LA L + D+D + E A G S A FR E ++
Sbjct: 37 GRSIVLVGLMGAGKTTIGRPLATRLGLPFVDAD-VEIERAAGCSIADVFRLYGEAAFRDG 95
Query: 153 ETEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVP-PGMVARMD---HSGF 207
E V+++L +V+ G GA S AL+R +S+W+ P P +V R+ H
Sbjct: 96 ERRVIRRLLEGPPMVLATGGGAFMDSTTRALVRERAVSIWLRCPLPVLVRRVSGRTHRPL 155
Query: 208 PES----EVLPQLFALYKEMRDGYATADVTVSLQKVASQLGYDDLDAVTTEDM 256
+ EVL L A+ + YA AD+ V G ++++ TT M
Sbjct: 156 LNTTSPREVLENLMAIRHPV---YAEADIIVD-------CGDNNVEHTTTRVM 198
>gi|255291839|dbj|BAH89269.1| putative shikimate kinase [Diospyros kaki]
Length = 86
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 49/85 (57%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
++LVGM + KT +GK L++AL Y + DSD V EA GG + F++ E ++ E+E
Sbjct: 1 IYLVGMMGSGKTTVGKVLSEALAYSFVDSDKYVEEALGGSPVTQIFKQFGESYFRGYESE 60
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSAN 180
L+ LS M R VV GAV N
Sbjct: 61 ALRNLSLMPRQVVATDGGAVIRPIN 85
>gi|389844643|ref|YP_006346723.1| 3-dehydroquinate synthase [Mesotoga prima MesG1.Ag.4.2]
gi|387859389|gb|AFK07480.1| 3-dehydroquinate synthetase [Mesotoga prima MesG1.Ag.4.2]
Length = 495
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 71/134 (52%), Gaps = 3/134 (2%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
VFL+GM + K+ +G+ L+ L + D DS + E A G S ++ F + EK +++ E
Sbjct: 3 VFLIGMMGSGKSTIGRILSSVLDKKFIDMDSEI-ERAKGMSISEIFEKEGEKEFRRLEKN 61
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPG-MVARMDHSGFP-ESEVL 213
+LK+L +VV G G + + N L+ S+++ +PP + R+ G P E
Sbjct: 62 LLKELVRSDEIVVSTGGGVILDNENRQTLKGENSIYLRLPPADLYRRVSVKGRPLLREGK 121
Query: 214 PQLFALYKEMRDGY 227
+F +++E R+ Y
Sbjct: 122 ESIFRIWEERRELY 135
>gi|223946037|gb|ACN27102.1| unknown [Zea mays]
Length = 181
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 50/80 (62%)
Query: 75 DPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGG 134
+PS + ++ A+ + + T +++VG + K ++ K LA+++ Y Y S+ L+ + GG
Sbjct: 56 NPSVDLLRRTAEAVGDFRKTPIYIVGTDCTAKRNIAKLLANSIIYRYLSSEELLEDVLGG 115
Query: 135 ESAAKAFRESDEKGYQQAET 154
+ A +AF+ESDEKGY + E
Sbjct: 116 KDALRAFKESDEKGYLEVEV 135
>gi|312115311|ref|YP_004012907.1| shikimate kinase [Rhodomicrobium vannielii ATCC 17100]
gi|311220440|gb|ADP71808.1| Shikimate kinase [Rhodomicrobium vannielii ATCC 17100]
Length = 212
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 67/126 (53%), Gaps = 2/126 (1%)
Query: 71 VAAEDPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFE 130
+ +E+ + +K A + L SV LVGM + K+ +G+ LA AL + D+D+ + E
Sbjct: 1 MTSENEAGGLKPMAKAVRHALGRQSVILVGMMGSGKSSIGRRLATALDLPFHDADAEI-E 59
Query: 131 AAGGESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLA-LLRHGIS 189
A G + + FR E ++ E V+++L G V+ G G+V S A A + R G+S
Sbjct: 60 TAAGMTIEEMFRTHGEGYFRDGEERVIRRLLQSGSQVLSTGGGSVISPATRAEIARGGVS 119
Query: 190 LWIDVP 195
+W+ P
Sbjct: 120 IWLHAP 125
>gi|349686537|ref|ZP_08897679.1| shikimate kinase / 3-dehydroquinate synthase [Gluconacetobacter
oboediens 174Bp2]
Length = 577
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 74/148 (50%), Gaps = 7/148 (4%)
Query: 93 GTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQA 152
G ++ LVG+ A KT +G+ LA L + DSD + E A G + A F + E +++
Sbjct: 37 GRTIVLVGLMGAGKTTIGRILAARLGVPFVDSDEEI-ERAAGCTIADLFHKYGEPEFRRG 95
Query: 153 ETEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVP-PGMVARM-DHSGFPE 209
E V+++L S +V+ G GA S A +R H +S+W+ P P +V R+ D + P
Sbjct: 96 ERLVIRRLLSGPPVVLATGGGAFMDSRTRASVREHAVSIWLRCPLPVLVQRVADRTHRPL 155
Query: 210 SEVLPQLFALYKEMR---DGYATADVTV 234
P L MR YA AD+ V
Sbjct: 156 LNAAPPHAVLADLMRLRHPVYAEADIIV 183
>gi|414868516|tpg|DAA47073.1| TPA: hypothetical protein ZEAMMB73_523115 [Zea mays]
Length = 183
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 50/80 (62%)
Query: 75 DPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGG 134
+PS + ++ A+ + + T +++VG + K ++ K LA+++ Y Y S+ L+ + GG
Sbjct: 58 NPSVDLLRRTAEAVGDFRKTPIYIVGTDCTAKRNIAKLLANSIIYRYLSSEELLEDVLGG 117
Query: 135 ESAAKAFRESDEKGYQQAET 154
+ A +AF+ESDEKGY + E
Sbjct: 118 KDALRAFKESDEKGYLEVEV 137
>gi|294677397|ref|YP_003578012.1| shikimate kinase [Rhodobacter capsulatus SB 1003]
gi|294476217|gb|ADE85605.1| shikimate kinase [Rhodobacter capsulatus SB 1003]
Length = 187
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 57/100 (57%), Gaps = 2/100 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ LVGM A KT +G LA ALR + DSD + AA S A+ F E ++ E+
Sbjct: 14 TIVLVGMMGAGKTAVGTALARALRVPFHDSDEEIVRAAQ-RSVAEIFERDGEPFFRARES 72
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALL-RHGISLWID 193
EV+++L S VV G GA S AN A++ R G+S+W+
Sbjct: 73 EVIERLLSGTPGVVSTGGGAFLSEANRAMIARLGVSVWLQ 112
>gi|381400678|ref|ZP_09925601.1| shikimate kinase [Kingella kingae PYKK081]
gi|380834314|gb|EIC14159.1| shikimate kinase [Kingella kingae PYKK081]
Length = 170
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 58/103 (56%), Gaps = 2/103 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG+ A KT LGK LA+ L ++DSD ++ E G S F E+G++ E+
Sbjct: 4 NLFLVGLMGAGKTTLGKQLAEHLNRPFYDSDHVICERT-GVSIPTIFEMEGEQGFRDRES 62
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPP 196
VL L+++ +V+ G GAV N A LR G +++ V P
Sbjct: 63 TVLADLAALDNIVLATGGGAVLRENNRACLRDKGTVIYLHVLP 105
>gi|92116111|ref|YP_575840.1| shikimate kinase [Nitrobacter hamburgensis X14]
gi|91799005|gb|ABE61380.1| shikimate kinase [Nitrobacter hamburgensis X14]
Length = 224
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 64/130 (49%), Gaps = 8/130 (6%)
Query: 64 TSNTVTKVAAEDPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFD 123
TS TV+ A P+ A I L G S+ LVGM A K+ +G+ LA L + D
Sbjct: 2 TSETVSPAGAGTPTEAA------IVAALGGRSLVLVGMMGAGKSTIGRRLATRLAMRFVD 55
Query: 124 SDSLVFEAAGGESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLAL 183
+D+ + E A G S + F E ++ E V+ +L S G LV+ G GAV A
Sbjct: 56 ADAEI-ERAAGMSIPEIFETHGEPHFRDGEARVIARLLSGGPLVLATGGGAVLREETRAR 114
Query: 184 LR-HGISLWI 192
+R IS+W+
Sbjct: 115 IRERAISIWL 124
>gi|339021375|ref|ZP_08645455.1| shikimate kinase [Acetobacter tropicalis NBRC 101654]
gi|338751539|dbj|GAA08759.1| shikimate kinase [Acetobacter tropicalis NBRC 101654]
Length = 588
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 76/151 (50%), Gaps = 13/151 (8%)
Query: 93 GTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQA 152
G S+ LVG+ A KT +G+ LA L + D+D + E A G S A FR E ++
Sbjct: 48 GRSIVLVGLMGAGKTTIGRRLATRLGLPFVDAD-IEIERAAGCSIADVFRLYGEAAFRDG 106
Query: 153 ETEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVP-PGMVARM---DHSGF 207
E V+++L +V+ G GA ++ +L+R IS+W+ P P ++ R+ +H
Sbjct: 107 ERRVIRRLLEGPPMVLATGGGAYMDASTRSLVRERAISIWLRCPLPVLLRRVQGRNHRPL 166
Query: 208 ----PESEVLPQLFALYKEMRDGYATADVTV 234
P +VL +L + + YA AD+ V
Sbjct: 167 LNEAPPRDVLARLMTVRHPI---YAEADIIV 194
>gi|445064351|ref|ZP_21376419.1| shikimate kinase [Brachyspira hampsonii 30599]
gi|444504268|gb|ELV04962.1| shikimate kinase [Brachyspira hampsonii 30599]
Length = 177
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 60/105 (57%), Gaps = 2/105 (1%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+F++G+ K+ L K LA L Y ++D DS + E G + + F + E ++ E++
Sbjct: 12 IFIIGLPGCGKSALSKMLAKKLNYQFYDMDSFI-EDKEGSTITEIFANNGETYFRNLESD 70
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMV 199
VL++LSS+ V+ G G V S N +++ G+++++D P ++
Sbjct: 71 VLQELSSLSNAVISTGGGIVLSEKNRNIMKDKGLTIFVDRNPDII 115
>gi|395785293|ref|ZP_10465025.1| hypothetical protein ME5_00343 [Bartonella tamiae Th239]
gi|395424840|gb|EJF91011.1| hypothetical protein ME5_00343 [Bartonella tamiae Th239]
Length = 250
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 71/144 (49%), Gaps = 9/144 (6%)
Query: 58 SIADDTTSNTVTKVAAEDPSFAVKKK-------AADISTELKGTSVFLVGMNNAIKTHLG 110
++ D +TK++ +D KK AA ++T L S+ LVG+ A KT +G
Sbjct: 26 NVMDKNVDKDITKISNKDERKKYFKKNAPMARTAARLNTRLNNKSLVLVGLMGAGKTTVG 85
Query: 111 KFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCA 170
K +A LR +FD+D + E A + + F E ++ E V+ +L G +V+
Sbjct: 86 KRVASMLRLPFFDADHEI-ENAAQMTIPELFEAYGEAEFRGLERRVILRLIQQGPMVLAT 144
Query: 171 GNGA-VQSSANLALLRHGISLWID 193
G GA + +A+ GIS+W+D
Sbjct: 145 GGGAYMNEETRMAINEKGISVWLD 168
>gi|365838926|ref|ZP_09380181.1| shikimate kinase [Anaeroglobus geminatus F0357]
gi|364566135|gb|EHM43835.1| shikimate kinase [Anaeroglobus geminatus F0357]
Length = 170
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 85/161 (52%), Gaps = 10/161 (6%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
+K ++ ++GM + KT G LA+ L ++D+D+ + E G K E ++
Sbjct: 1 MKDRNIIIIGMPGSGKTTFGAALAEELGREFYDADTYLEETEG--KTIKELFAVSEDCFR 58
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPG-MVARMDHSGFP 208
AET + L+ +VV G G V+ N+A+ + +GI +++D P + A +D S P
Sbjct: 59 DAETRTARALACKEGIVVATGGGVVKRPENIAIYKENGIIIFLDRDPADIAADVDVSKRP 118
Query: 209 ESEVLPQ-LFALYKEMRDGY-ATADVTV----SLQKVASQL 243
+ PQ +F LY+E D Y A+AD + ++++V+ QL
Sbjct: 119 LLKDGPQKVFDLYRERIDTYNASADYKMANHQTIEEVSGQL 159
>gi|423717808|ref|ZP_17691998.1| hypothetical protein MEG_01538 [Bartonella tamiae Th307]
gi|395427208|gb|EJF93324.1| hypothetical protein MEG_01538 [Bartonella tamiae Th307]
Length = 246
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 71/144 (49%), Gaps = 9/144 (6%)
Query: 58 SIADDTTSNTVTKVAAEDPSFAVKKK-------AADISTELKGTSVFLVGMNNAIKTHLG 110
++ D +TK++ +D KK AA ++T L S+ LVG+ A KT +G
Sbjct: 22 NVMDKNVDKDITKISNKDERKKYFKKNAPMARTAARLNTRLNNKSLVLVGLMGAGKTTVG 81
Query: 111 KFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCA 170
K +A LR +FD+D + E A + + F E ++ E V+ +L G +V+
Sbjct: 82 KRVASMLRLPFFDADHEI-ENAAQMTIPELFEAYGEAEFRGLERRVILRLIQQGPMVLAT 140
Query: 171 GNGA-VQSSANLALLRHGISLWID 193
G GA + +A+ GIS+W+D
Sbjct: 141 GGGAYMNEETRMAINEKGISVWLD 164
>gi|95928758|ref|ZP_01311504.1| Shikimate kinase [Desulfuromonas acetoxidans DSM 684]
gi|95135103|gb|EAT16756.1| Shikimate kinase [Desulfuromonas acetoxidans DSM 684]
Length = 169
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 83/171 (48%), Gaps = 18/171 (10%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
++ VG + K+ +GK LADAL + D D V + S FRE E +++ E+E
Sbjct: 6 IYFVGFMGSGKSTVGKLLADALGMGFIDLDDEVVKRQQ-RSINAIFREEGEDVFRRYESE 64
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVP-PGMVARMDHSG---FPES 210
+LK+ S LV G G + S N ++ G+ +++ P ++AR++ S
Sbjct: 65 LLKEFSVKEGLVFSTGGGIIGSERNWQIMNSCGVVVFLACSWPTVLARLEGSSERPLVNQ 124
Query: 211 EVLPQLFALYKEMRDGYATADVTVSLQKVASQLGYDDLDAVTTEDMTLEVK 261
L L ALY+ ++ Y ADV + D+D +T E++ LE+K
Sbjct: 125 NDLESLKALYESRQELYRRADVQI------------DVDELTPEEVVLEIK 163
>gi|84516060|ref|ZP_01003420.1| putative shikimate kinase [Loktanella vestfoldensis SKA53]
gi|84509756|gb|EAQ06213.1| putative shikimate kinase [Loktanella vestfoldensis SKA53]
Length = 185
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 59/100 (59%), Gaps = 2/100 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
SV LVGM + KT +G+ LA L + DSD+ + EAA S A+ F E +++ ET
Sbjct: 12 SVVLVGMMGSGKTAIGRSLASTLHVPFVDSDTAIEEAAA-LSIAEIFARDGEAFFRRRET 70
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALL-RHGISLWID 193
EVL++L + G ++ G GA ++ N ++ R I++W+D
Sbjct: 71 EVLRRLLAGGAQIISTGGGAFLAAENRDMIARDAIAVWLD 110
>gi|296113650|ref|YP_003627588.1| shikimate kinase [Moraxella catarrhalis RH4]
gi|416157421|ref|ZP_11605164.1| shikimate kinase [Moraxella catarrhalis 101P30B1]
gi|416218596|ref|ZP_11625010.1| shikimate kinase [Moraxella catarrhalis 7169]
gi|416224551|ref|ZP_11626575.1| shikimate kinase [Moraxella catarrhalis 103P14B1]
gi|416231073|ref|ZP_11628655.1| shikimate kinase [Moraxella catarrhalis 46P47B1]
gi|416233261|ref|ZP_11629235.1| shikimate kinase [Moraxella catarrhalis 12P80B1]
gi|416238873|ref|ZP_11631556.1| shikimate kinase [Moraxella catarrhalis BC1]
gi|416243735|ref|ZP_11634070.1| shikimate kinase [Moraxella catarrhalis BC7]
gi|416248005|ref|ZP_11636097.1| shikimate kinase [Moraxella catarrhalis BC8]
gi|416252252|ref|ZP_11638087.1| shikimate kinase [Moraxella catarrhalis CO72]
gi|416255883|ref|ZP_11639452.1| shikimate kinase [Moraxella catarrhalis O35E]
gi|421780454|ref|ZP_16216943.1| shikimate kinase [Moraxella catarrhalis RH4]
gi|295921344|gb|ADG61695.1| shikimate kinase [Moraxella catarrhalis BBH18]
gi|326559644|gb|EGE10058.1| shikimate kinase [Moraxella catarrhalis 7169]
gi|326560016|gb|EGE10411.1| shikimate kinase [Moraxella catarrhalis 46P47B1]
gi|326562498|gb|EGE12815.1| shikimate kinase [Moraxella catarrhalis 103P14B1]
gi|326566934|gb|EGE17072.1| shikimate kinase [Moraxella catarrhalis 12P80B1]
gi|326567678|gb|EGE17784.1| shikimate kinase [Moraxella catarrhalis BC1]
gi|326568687|gb|EGE18758.1| shikimate kinase [Moraxella catarrhalis BC7]
gi|326568864|gb|EGE18934.1| shikimate kinase [Moraxella catarrhalis BC8]
gi|326572678|gb|EGE22667.1| shikimate kinase [Moraxella catarrhalis CO72]
gi|326574277|gb|EGE24225.1| shikimate kinase [Moraxella catarrhalis 101P30B1]
gi|326575063|gb|EGE24992.1| shikimate kinase [Moraxella catarrhalis O35E]
gi|407812610|gb|EKF83395.1| shikimate kinase [Moraxella catarrhalis RH4]
Length = 211
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 63/114 (55%), Gaps = 3/114 (2%)
Query: 80 VKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAK 139
V+K +S +L ++FLVG A KT +GK LA L + D D + + G +
Sbjct: 14 VEKAGNALSKQL--PAIFLVGPMGAGKTTIGKLLAKHLGRNFIDCDWYIVDQTGADIPW- 70
Query: 140 AFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWID 193
F + E+G++ ET L++L+++ +++ G GAV + N LL+ G+ +++D
Sbjct: 71 IFEKEGEEGFRDRETRALQELTALPNIIMATGGGAVGRTKNRELLKKGLVIYLD 124
>gi|329114346|ref|ZP_08243108.1| 3-dehydroquinate synthase [Acetobacter pomorum DM001]
gi|326696422|gb|EGE48101.1| 3-dehydroquinate synthase [Acetobacter pomorum DM001]
Length = 596
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 93 GTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQA 152
G S+ LVG+ A KT +G+ LA L + D+D + E A G S A FR E ++
Sbjct: 56 GRSIVLVGLMGAGKTTIGRPLATRLGLPFVDAD-VEIERAAGCSIADVFRLYGEAAFRDG 114
Query: 153 ETEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVP-PGMVARMD---HSGF 207
E V+++L +V+ G GA S AL+R +S+W+ P P +V R+ H
Sbjct: 115 ERRVIRRLLEGPPMVLATGGGAFMDSTTRALVRERAVSIWLRCPLPVLVRRVSGRTHRPL 174
Query: 208 PES----EVLPQLFALYKEMRDGYATADVTVSLQKVASQLGYDDLDAVTTEDM 256
+ +VL L A+ + YA AD+ V G ++++ TT M
Sbjct: 175 LNTTSPRDVLENLMAIRHPV---YAEADIIV-------DCGDNNVEHTTTRVM 217
>gi|171915132|ref|ZP_02930602.1| shikimate kinase [Verrucomicrobium spinosum DSM 4136]
Length = 471
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 80/171 (46%), Gaps = 17/171 (9%)
Query: 87 ISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDE 146
+++ +G ++ +VG+ + K+ +G+ A +L + + D+D ++ E A ++ F E
Sbjct: 295 VTSTRRGRNIIIVGLMGSGKSTVGRMAAHSLGFGFVDTDQIIIEKAR-KTIPDIFAAEGE 353
Query: 147 KGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVPPG-MVARMDH 204
G++ ETE LK L LV+ G G V ANL +L+ G +W++ P + R H
Sbjct: 354 AGFRYRETEALKSLLGKEGLVIATGGGIVTQPANLPILKQLGYVVWLNADPNTLYQRTVH 413
Query: 205 SG----FPESEVLPQLFALYKEMRDGYATADVTVSLQKVAS-QLGYDDLDA 250
S + L LY+ R Y QK Q+G DDL A
Sbjct: 414 SNDRPLLRNHDPAATLRHLYETRRPMY---------QKACDLQIGTDDLTA 455
>gi|85702958|ref|ZP_01034062.1| shikimate kinase [Roseovarius sp. 217]
gi|85671886|gb|EAQ26743.1| shikimate kinase [Roseovarius sp. 217]
Length = 193
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 58/102 (56%), Gaps = 2/102 (1%)
Query: 93 GTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQA 152
G +V LVGM A KT +GK LA + + DSD+ + E A + A+ F+ E ++
Sbjct: 17 GKTVVLVGMMGAGKTAVGKALAAKIGVPFLDSDTEI-EKAANMTIAEIFQRDGEAFFRAR 75
Query: 153 ETEVLKQLSSMGRLVVCAGNGAVQSSANLALL-RHGISLWID 193
ETEV+ +L R ++ G GA + N AL+ R G+S+W+D
Sbjct: 76 ETEVIDRLLDGQRSILSTGGGAFLAERNRALVARKGVSVWLD 117
>gi|349699505|ref|ZP_08901134.1| shikimate kinase / 3-dehydroquinate synthase [Gluconacetobacter
europaeus LMG 18494]
Length = 577
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 76/151 (50%), Gaps = 13/151 (8%)
Query: 93 GTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQA 152
G ++ LVG+ A KT +G+ LA L + DSD + E A G + A F++ E +++
Sbjct: 37 GRTIVLVGLMGAGKTTIGRILAARLGVPFVDSDEEI-ERAAGYTIADLFQKYGEPEFRRG 95
Query: 153 ETEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVP-PGMVARM-DHSGFP- 208
E V+++L S +V+ G GA S A +R H IS+W+ P P +V R+ D + P
Sbjct: 96 ERLVIRRLLSGPPVVLATGGGAFMDSRTRAGVREHAISIWLRCPLPVLVQRVADRTHRPL 155
Query: 209 -----ESEVLPQLFALYKEMRDGYATADVTV 234
VL L L + YA AD+ V
Sbjct: 156 LNATSPHAVLANLMQLRHPV---YAEADIIV 183
>gi|189346472|ref|YP_001943001.1| shikimate kinase [Chlorobium limicola DSM 245]
gi|238692217|sp|B3EIT1.1|AROK_CHLL2 RecName: Full=Shikimate kinase; Short=SK
gi|189340619|gb|ACD90022.1| Shikimate kinase [Chlorobium limicola DSM 245]
Length = 199
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 78/153 (50%), Gaps = 15/153 (9%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+FL G + + K+ +G LA++L Y + D D + E+ G+S K F E E+ ++ E E
Sbjct: 7 IFLTGFSGSGKSTIGPLLANSLGYGFIDLDQEI-ESKAGKSITKIFAEEGEQTFRNLELE 65
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMVARM------------ 202
L+QL+ LVV G G ++++ L+R +G +++ P +AR
Sbjct: 66 TLRQLTGKKELVVSLGGGVLENNDCYRLIRENGTLVYLKSSPRSLARRLCNKTDRPLLKG 125
Query: 203 DH-SGFPESEVLPQLFALYKEMRDGYATADVTV 234
+H + E+ ++ + ++ YATAD++V
Sbjct: 126 EHGTRLSREEIELKISTILEKREPRYATADLSV 158
>gi|149913842|ref|ZP_01902374.1| shikimate kinase [Roseobacter sp. AzwK-3b]
gi|149812126|gb|EDM71957.1| shikimate kinase [Roseobacter sp. AzwK-3b]
Length = 206
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 88/176 (50%), Gaps = 15/176 (8%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+V LVGM A KT +GK LA L + DSD+ + E A S A+ F E ++ ET
Sbjct: 32 TVVLVGMMGAGKTAVGKALAVRLAVPFLDSDAEI-EQAANMSIAEIFARDGEAFFRDRET 90
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALL-RHGISLWIDVPPGMV-ARMDHSGFPESEV 212
+V+ +L R ++ G GA S N L+ R G+S+W+ ++ +R+ H ++
Sbjct: 91 QVIDRLLEGERGILSTGGGAFLSERNRNLISRKGVSVWLKADLALLWSRVKHK---DTRP 147
Query: 213 LPQLFALYKEMRDGYAT-------ADVTVSLQKVAS--QLGYDDLDAVTTEDMTLE 259
L + Y +RD Y T AD+TV+ Q S + L+A+TT + LE
Sbjct: 148 LLRTADPYGTLRDLYETRLPFYQEADLTVTAQPDYSIDTMAEKVLEALTTREDVLE 203
>gi|227498931|ref|ZP_03929070.1| shikimate kinase [Acidaminococcus sp. D21]
gi|352683460|ref|YP_004895443.1| shikimate kinase [Acidaminococcus intestini RyC-MR95]
gi|226904382|gb|EEH90300.1| shikimate kinase [Acidaminococcus sp. D21]
gi|350278113|gb|AEQ21303.1| shikimate kinase [Acidaminococcus intestini RyC-MR95]
Length = 169
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 79/153 (51%), Gaps = 18/153 (11%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ +GM A KT +GK +A L + +FDSD + E + FRES E ++Q ET
Sbjct: 3 NIIFIGMPGAGKTTIGKEVARTLAWPFFDSDVRLRERIH-RDIKELFRES-EAAFRQEET 60
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVPPGMVA-RMDHSGFP---- 208
E L++L +V+ G G ++ + N+ALL+H G +++D +A +D G P
Sbjct: 61 ETLRELCQKEGIVLSCGGGVIKKAENVALLKHGGFLIFLDRSLEAIASSVDQMGRPLLSA 120
Query: 209 ----ESEVLPQLFALYKEMRDGYATADVTVSLQ 237
E+ + +ALY A AD+ +S++
Sbjct: 121 SKNRLKELYDERYALY------LAAADLHISVR 147
>gi|384918293|ref|ZP_10018375.1| shikimate kinase [Citreicella sp. 357]
gi|384467778|gb|EIE52241.1| shikimate kinase [Citreicella sp. 357]
Length = 191
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 75/147 (51%), Gaps = 7/147 (4%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+V LVGM A KT +GK LA ALR + DSD+ + E+A S A+ F E ++ ET
Sbjct: 16 TVVLVGMMGAGKTAVGKALATALRVPFRDSDAEI-ESAANMSIAEIFERDGEPFFRARET 74
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALL-RHGISLWIDVP-PGMVARMDHSGFPESEV 212
+++ +L V+ G GA + N ++ R G+++W+D P + R+ H
Sbjct: 75 QIISRLLDGPPAVLSTGGGAYMRAENRDMITRRGVAVWLDAALPVLWNRVRHKSTRPLLR 134
Query: 213 LPQLFALYKEMRDG----YATADVTVS 235
P A +++ + Y AD+TV+
Sbjct: 135 TPDPHATLRDIYEARVPVYRLADLTVT 161
>gi|71066433|ref|YP_265160.1| shikimate kinase [Psychrobacter arcticus 273-4]
gi|115312164|sp|Q4FQI2.1|AROK_PSYA2 RecName: Full=Shikimate kinase; Short=SK
gi|71039418|gb|AAZ19726.1| shikimate kinase [Psychrobacter arcticus 273-4]
Length = 186
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 57/102 (55%), Gaps = 2/102 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
SVFLVG A KT +G+ LA L + DSD V E+ G A F + E G+++ ET
Sbjct: 7 SVFLVGPMGAGKTTIGRLLAKQLGRTFVDSDWYV-ESQTGADIAWIFDKEGEAGFRERET 65
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVP 195
+ +L+ ++V+ G GAV ++ N L+ GI ++++ P
Sbjct: 66 RAIDELTQQPQIVLATGGGAVMAAENREFLKQRGIVIYLNAP 107
>gi|319940609|ref|ZP_08014952.1| hypothetical protein HMPREF9464_00171 [Sutterella wadsworthensis
3_1_45B]
gi|319805975|gb|EFW02733.1| hypothetical protein HMPREF9464_00171 [Sutterella wadsworthensis
3_1_45B]
Length = 509
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 66/130 (50%), Gaps = 10/130 (7%)
Query: 76 PSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGE 135
P A + DI E +++ L+GM KT +GK +A L + D D+LV E G+
Sbjct: 335 PLCATRSILCDIRRE--ASNIVLIGMPGCGKTTIGKCVAARLLRPFIDLDALV-ERRVGK 391
Query: 136 SAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSAN-LALLRHGISLWIDV 194
S+ + +RE E+ ++ E+E++K+LS LV+ G GA N + L +G W+
Sbjct: 392 SSERIYREDGEEYFRDFESEIIKELSGRHGLVISTGGGACLRPENRMRLALNGTFYWLQR 451
Query: 195 PPGMVARMDH 204
P +DH
Sbjct: 452 P------LDH 455
>gi|410584241|ref|ZP_11321346.1| 3-dehydroquinate synthase [Thermaerobacter subterraneus DSM 13965]
gi|410505103|gb|EKP94613.1| 3-dehydroquinate synthase [Thermaerobacter subterraneus DSM 13965]
Length = 743
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 2/107 (1%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+ LVGM A KT +G+ LA L + + D D LV +AAG + F + E G+++ E +
Sbjct: 8 LVLVGMMGAGKTTVGRALAARLGWAFLDLDDLVEQAAG-RTVGALFAQEGEAGFRRREEQ 66
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLA-LLRHGISLWIDVPPGMVAR 201
L ++ R+V+ G G V S AN A L +W++ PP +AR
Sbjct: 67 ALAWALALERVVIATGGGVVLSEANRAKLAAEPWVVWLEAPPEELAR 113
>gi|429123617|ref|ZP_19184150.1| shikimate kinase [Brachyspira hampsonii 30446]
gi|426280450|gb|EKV57464.1| shikimate kinase [Brachyspira hampsonii 30446]
Length = 177
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 57/105 (54%), Gaps = 2/105 (1%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+F++G+ K+ L K LA+ L Y +D DS + E G + F + E ++ E+E
Sbjct: 12 IFIIGLPGCGKSALSKMLAEKLNYNLYDMDSFI-ENKEGRTITDIFANNGEDYFRNIESE 70
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMV 199
VL +LS + V+ G G V S N ++R G+++++D P ++
Sbjct: 71 VLHELSLLSNAVISTGGGIVLSEKNRNIMRDKGLTIFVDRNPDII 115
>gi|333374994|ref|ZP_08466823.1| shikimate kinase [Kingella kingae ATCC 23330]
gi|332973071|gb|EGK11008.1| shikimate kinase [Kingella kingae ATCC 23330]
Length = 177
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 57/103 (55%), Gaps = 2/103 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG+ A KT LGK LA+ L ++DSD ++ E G S F E+G++ E+
Sbjct: 11 NLFLVGLMGAGKTTLGKQLAEHLNRPFYDSDHVICERT-GVSIPTIFEMEGEQGFRDRES 69
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPP 196
VL L+++ +V+ G G V N A LR G +++ V P
Sbjct: 70 TVLADLAALDNIVLATGGGTVLRENNRACLRDKGTVIYLHVLP 112
>gi|302392507|ref|YP_003828327.1| shikimate kinase [Acetohalobium arabaticum DSM 5501]
gi|302204584|gb|ADL13262.1| Shikimate kinase [Acetohalobium arabaticum DSM 5501]
Length = 169
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 20/168 (11%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L+G K+ +G+ L++ L + DSD ++ E AG E ++ F E E+ ++ ET
Sbjct: 3 NIVLIGFMGTGKSTVGQHLSERLELEFVDSDEVIEERAGREISS-IFAEYGEEYFRDLET 61
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRHG--ISLWIDVPPGMVARMDHSGFPESEV 212
EV+ LS RLV+ G G V N+ LR I L P ++ R+ S P EV
Sbjct: 62 EVITDLSRQQRLVISTGGGVVLRQENIEQLRKKGTIILLTAEPEVILDRVKDSDRPLLEV 121
Query: 213 LPQLFALYKEM----RDGY------------ATADVTVSLQKVASQLG 244
P+ KEM R+ Y + A+V ++K+ S G
Sbjct: 122 -PEPLEKIKEMLADRREYYDITEYKIDTSQMSVAEVVAEIEKIISNEG 168
>gi|298369929|ref|ZP_06981245.1| shikimate kinase [Neisseria sp. oral taxon 014 str. F0314]
gi|298281389|gb|EFI22878.1| shikimate kinase [Neisseria sp. oral taxon 014 str. F0314]
Length = 174
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 84/160 (52%), Gaps = 13/160 (8%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++F VG+ A KT LG+ +A L ++DSD + + +G S + F E+G++ ET
Sbjct: 10 NLFFVGLMGAGKTTLGRHIAKTLDRPFYDSDHEICKCSG-VSISTIFEVEGEQGFRSRET 68
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID-VPPGMVARMDH-SGFPESE 211
+LK+L++M +V+ G GAV N LR +G +++ P ++ R H + P +
Sbjct: 69 AMLKKLAAMKNIVLSTGGGAVLREENRICLRNNGTVIYLHACPETLLERTRHDTSRPLLQ 128
Query: 212 V---LPQLFALYKEMRDGY--ATADVTV---SLQKVASQL 243
V L +L LY + RD TA + + + QK S+L
Sbjct: 129 VENPLAKLRELY-DSRDAVYRQTAHIVIESGNCQKTISKL 167
>gi|443921470|gb|ELU41085.1| arom polypeptide [Rhizoctonia solani AG-1 IA]
Length = 444
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ +VGM A KTH+G A +L + + D+D FE GE ++ R ++QAE+
Sbjct: 332 TIIIVGMRGAGKTHIGGIAAASLGWKFLDADH-EFEGRTGEPVSQYVRSKGWPAFRQAES 390
Query: 155 EVLKQLSSMG--RLVVCAGNGAVQSSANLALL 184
+++K L S R ++ G G V+S+AN ALL
Sbjct: 391 QIIKDLISENPTRTIISTGGGIVESAANRALL 422
>gi|452851502|ref|YP_007493186.1| Shikimate kinase 2 [Desulfovibrio piezophilus]
gi|451895156|emb|CCH48035.1| Shikimate kinase 2 [Desulfovibrio piezophilus]
Length = 173
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FL+G KT +G+ LA++L + D+D + G E A R E G+++ ET
Sbjct: 6 NIFLIGPRACGKTRIGRLLANSLGAEFVDTDHFFVDMVGMEIAPYVERYGWE-GFREMET 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPP 196
E L +S+ GR V+ G G V +N A+L G+++++ P
Sbjct: 65 EALASVSTGGRRVIGCGGGIVLRESNRAILASGVAVYLKTAP 106
>gi|375293211|ref|YP_005127750.1| shikimate kinase [Corynebacterium diphtheriae INCA 402]
gi|376248620|ref|YP_005140564.1| shikimate kinase [Corynebacterium diphtheriae HC04]
gi|419860916|ref|ZP_14383556.1| shikimate kinase [Corynebacterium diphtheriae bv. intermedius str.
NCTC 5011]
gi|371582882|gb|AEX46548.1| shikimate kinase [Corynebacterium diphtheriae INCA 402]
gi|372115188|gb|AEX81246.1| shikimate kinase [Corynebacterium diphtheriae HC04]
gi|387982600|gb|EIK56101.1| shikimate kinase [Corynebacterium diphtheriae bv. intermedius str.
NCTC 5011]
Length = 182
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 82/174 (47%), Gaps = 17/174 (9%)
Query: 85 ADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRES 144
+D+S ++ V LVG A KT +G+ LA+AL DSD+L+ E G+ F E
Sbjct: 8 SDVSVRVRPI-VVLVGPPGAGKTTIGRRLANALNTSVVDSDALI-EQLQGKPCGAVFSEL 65
Query: 145 DEKGYQQAETEVLK-QLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVAR-- 201
E ++ E EV+ L++ G VV G GAV + + LR I +W+DV R
Sbjct: 66 GEPNFRDLEAEVIDFALTTAG--VVSLGGGAVTTESVRQKLRKQIVVWVDVSAAEGVRRT 123
Query: 202 --------MDHSGFPE--SEVLPQLFALYKEMRDGYATADVTVSLQKVASQLGY 245
+D + + SE+L Q YKE+ D A D Q VA LG+
Sbjct: 124 AVENSRPLLDATNPLDRYSELLAQRRDFYKEVADYRAHTDGRSPQQIVADILGF 177
>gi|376254421|ref|YP_005142880.1| shikimate kinase [Corynebacterium diphtheriae PW8]
gi|376284844|ref|YP_005158054.1| shikimate kinase [Corynebacterium diphtheriae 31A]
gi|376287844|ref|YP_005160410.1| shikimate kinase [Corynebacterium diphtheriae BH8]
gi|376290539|ref|YP_005162786.1| shikimate kinase [Corynebacterium diphtheriae C7 (beta)]
gi|371578359|gb|AEX42027.1| shikimate kinase [Corynebacterium diphtheriae 31A]
gi|371585178|gb|AEX48843.1| shikimate kinase [Corynebacterium diphtheriae BH8]
gi|372103935|gb|AEX67532.1| shikimate kinase [Corynebacterium diphtheriae C7 (beta)]
gi|372117505|gb|AEX69975.1| shikimate kinase [Corynebacterium diphtheriae PW8]
Length = 182
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 81/174 (46%), Gaps = 17/174 (9%)
Query: 85 ADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRES 144
+D+S ++ V LVG A KT +G+ LA+AL DSD L+ E G+ F E
Sbjct: 8 SDVSGRVRPI-VVLVGPPGAGKTTIGRRLANALNTSVVDSDVLI-EQLQGKPCGVVFAEL 65
Query: 145 DEKGYQQAETEVLK-QLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVAR-- 201
E ++ E EV+ L++ G VV G GAV + + LR I +W+DV R
Sbjct: 66 GEPNFRDLEAEVIDFALTTAG--VVSLGGGAVTTESVRQKLRAQIVVWVDVSAAEGVRRT 123
Query: 202 --------MDHSGFPE--SEVLPQLFALYKEMRDGYATADVTVSLQKVASQLGY 245
+D + E SE+L Q YKE+ D A D Q VA LG+
Sbjct: 124 AVENSRPLLDTTNPLERYSELLAQRRDFYKEVADYRAHTDARSPQQIVADILGF 177
>gi|238022252|ref|ZP_04602678.1| hypothetical protein GCWU000324_02159 [Kingella oralis ATCC 51147]
gi|237866866|gb|EEP67908.1| hypothetical protein GCWU000324_02159 [Kingella oralis ATCC 51147]
Length = 178
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 75/158 (47%), Gaps = 5/158 (3%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG+ A KT GK LA L +FDSD ++ E G + F E G++ E+
Sbjct: 7 NLFLVGLMGAGKTTQGKRLAQHLNRTFFDSDQVICERTGVD-IPTIFEMEGEAGFRNRES 65
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVPPGMVARMDHSGFPESEVL 213
++ +LS + +V+ G GAV N LR G+ +++ V P + + G + L
Sbjct: 66 NIINELSLLPNIVLATGGGAVLREQNRDYLRQRGLVVYLHVQPETL--FERVGKDRNRPL 123
Query: 214 PQLFALYKEMRDGYATAD-VTVSLQKVASQLGYDDLDA 250
Q+ + RD Y D + + ++G DD A
Sbjct: 124 LQVQDALAKFRDLYRARDAIYRETAHIVIEVGADDCQA 161
>gi|93006992|ref|YP_581429.1| shikimate kinase [Psychrobacter cryohalolentis K5]
gi|122414838|sp|Q1Q8Q8.1|AROK_PSYCK RecName: Full=Shikimate kinase; Short=SK
gi|92394670|gb|ABE75945.1| shikimate kinase [Psychrobacter cryohalolentis K5]
Length = 186
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 57/102 (55%), Gaps = 2/102 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
SVFLVG A KT +G+ LA L + DSD + E+ G A F + E G+++ ET
Sbjct: 7 SVFLVGPMGAGKTTIGRLLAKQLGRSFVDSDWYI-ESQTGADIAWIFAKEGEAGFRERET 65
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVP 195
+ +L+ ++V+ G GAV ++ N L+ GI ++++ P
Sbjct: 66 RAIDELTQQPQIVLATGGGAVMAAENREYLKQRGIVIYLNAP 107
>gi|298292764|ref|YP_003694703.1| shikimate kinase [Starkeya novella DSM 506]
gi|296929275|gb|ADH90084.1| Shikimate kinase [Starkeya novella DSM 506]
Length = 201
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 60/111 (54%), Gaps = 2/111 (1%)
Query: 83 KAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFR 142
KAA ++ L S+ LVGM A K+ +GK LA L + D+D+ + E A G + + F
Sbjct: 10 KAAALNELLGVRSIVLVGMMGAGKSSVGKRLARRLNLAFADADTEI-EQAAGMTIPEIFA 68
Query: 143 ESDEKGYQQAETEVLKQLSSMGRLVVCAGNGA-VQSSANLALLRHGISLWI 192
E ++ E +V+ +L G +V+ G GA + A+ RHGI++W+
Sbjct: 69 HHGEPAFRDGEKKVIARLLEHGPMVLATGGGAYMNGDTRDAIARHGITVWL 119
>gi|296115019|ref|ZP_06833662.1| 3-dehydroquinate synthase [Gluconacetobacter hansenii ATCC 23769]
gi|295978437|gb|EFG85172.1| 3-dehydroquinate synthase [Gluconacetobacter hansenii ATCC 23769]
Length = 587
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Query: 87 ISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDE 146
I T +G S+ LVG+ A KT +G+ LA L + DSD + E A G S A F++ E
Sbjct: 41 IPTMPQGRSIVLVGLMGAGKTTIGRLLAARLNLEFVDSDEEI-ERAAGCSIADLFQKYGE 99
Query: 147 KGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVP-PGMVARM-D 203
+++ E VL++L S +V+ G GA A +R + S+W+ P P ++ R+ D
Sbjct: 100 AEFRRGEHMVLRRLLSGPPVVLATGGGAFMDPRTRAYMRENATSVWLRCPLPVLLQRVQD 159
Query: 204 HSGFPESEVLPQLFALYKEMRDG---YATADVTV 234
+ P V L MR YA AD+ V
Sbjct: 160 RTHRPLLNVDSPATVLSDLMRKRHPVYAEADIIV 193
>gi|254437902|ref|ZP_05051396.1| shikimate kinase [Octadecabacter antarcticus 307]
gi|198253348|gb|EDY77662.1| shikimate kinase [Octadecabacter antarcticus 307]
Length = 193
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+V LVGM + KT +G+ LA L Y DSD+ + EAA + A+ F S E ++ E
Sbjct: 19 TVVLVGMMGSGKTAIGRTLALKLGVPYVDSDAEI-EAAANATIAEIFARSGEPFFRNREA 77
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANL-ALLRHGISLWID 193
EV+ +L V+ G GA + N A+ RHG+++W+D
Sbjct: 78 EVIARLLQSDPCVLSTGGGAYLADRNREAISRHGVAVWLD 117
>gi|339482607|ref|YP_004694393.1| Shikimate kinase [Nitrosomonas sp. Is79A3]
gi|338804752|gb|AEJ00994.1| Shikimate kinase [Nitrosomonas sp. Is79A3]
Length = 565
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
Query: 87 ISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDE 146
+ +L T++ LVGM A KT +GK LA++L + DSD + + G + F E
Sbjct: 12 VQEKLGHTNIILVGMMGAGKTTIGKALANSLGKEFIDSDHEIQDRTGVKIPV-IFEIEGE 70
Query: 147 KGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHG 187
G+++ E+EVL +L +V+ G GAV S N +LR G
Sbjct: 71 AGFRKRESEVLVELVKKNNIVLATGGGAVLSRENRQILRRG 111
>gi|385336300|ref|YP_005890247.1| shikimate kinase [Neisseria gonorrhoeae TCDC-NG08107]
gi|317164843|gb|ADV08384.1| shikimate kinase [Neisseria gonorrhoeae TCDC-NG08107]
Length = 157
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 65/127 (51%), Gaps = 4/127 (3%)
Query: 106 KTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEVLKQLSSMGR 165
KT LG+ +A L Y ++DSD + AA G F E+G++ ET +LK+L +
Sbjct: 5 KTTLGRQMAQRLDYRFYDSDHEI-AAAAGVPIPTIFEMEGEQGFRSRETAILKKLIVLPH 63
Query: 166 LVVCAGNGAVQSSANLALLRH-GISLWIDVPPGMVARMDHSGFPESEVLPQLFALYKEMR 224
+V+ G GAV N AL+R G +++ PP + ++ + S L Q+ ++R
Sbjct: 64 IVLSTGGGAVLKEENRALIRKSGTVVYLHAPPETL--LERTRCDNSRPLLQVADPLAKLR 121
Query: 225 DGYATAD 231
+ YA D
Sbjct: 122 ELYAARD 128
>gi|397781207|ref|YP_006545680.1| shikimate 5-dehydrogenase [Methanoculleus bourgensis MS2]
gi|396939709|emb|CCJ36964.1| shikimate 5-dehydrogenase [Methanoculleus bourgensis MS2]
Length = 451
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 68/145 (46%), Gaps = 10/145 (6%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+ L G KT +G+ LA+ L+ +FD+D+L+ E G + FR E ++ E E
Sbjct: 4 IVLTGFRGTGKTSVGRILAERLQVPFFDTDTLI-ERRAGMPIPEIFRRHGEAAFRALERE 62
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGM----VARMDHSG---F 207
V+ L V+ G GAV AN+A LR HG + PG+ +A D G
Sbjct: 63 VIASLRD-AEGVISTGGGAVLDPANVADLRWHGTVFLLSAEPGVIYERIAGSDRPGLTDL 121
Query: 208 PESEVLPQLFALYKEMRDGYATADV 232
P +E + L A +E G A A +
Sbjct: 122 PPAEEVQTLLARRREAYLGAADACI 146
>gi|452993651|emb|CCQ94823.1| Shikimate kinase [Clostridium ultunense Esp]
Length = 183
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 73/145 (50%), Gaps = 5/145 (3%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L+G A KT +GK LA+ L + + D+D+ + E G+ F E+G+++ ET
Sbjct: 3 NIILIGFMGAGKTSVGKALAERLHWKWIDTDAEI-ERRAGKRIPNIFHNYGEEGFRKMET 61
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANL-ALLRHGISLWIDVP-PGMVARMDHSGFP--ES 210
EVL L V+ G G V N ++RHG +++ P +++R+ S P +
Sbjct: 62 EVLHHLLQSSGQVISTGGGIVLRKENRDVMVRHGKVVYLKADLPELISRLRGSDRPLLQG 121
Query: 211 EVLPQLFALYKEMRDGYATADVTVS 235
++ ++ L+ + Y A VTV
Sbjct: 122 DMEGKIKELWTARKGFYDFASVTVE 146
>gi|345876138|ref|ZP_08827913.1| shikimate kinase [Neisseria weaveri LMG 5135]
gi|417957890|ref|ZP_12600808.1| shikimate kinase [Neisseria weaveri ATCC 51223]
gi|343967095|gb|EGV35345.1| shikimate kinase [Neisseria weaveri LMG 5135]
gi|343967636|gb|EGV35879.1| shikimate kinase [Neisseria weaveri ATCC 51223]
Length = 177
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 74/147 (50%), Gaps = 8/147 (5%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FL+G+ A KT LGK LA L +FDSD + + G S F E+G++ E+
Sbjct: 10 NLFLIGLMGAGKTTLGKQLAQRLNRCFFDSDHEICQRT-GVSIPTIFELEGEQGFRDRES 68
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALL-RHGISLWIDVPPG-MVARMDH-SGFPESE 211
V+ +L+ M +V+ G GAV N + L + G +++ P ++ R H + P +
Sbjct: 69 NVINELTHMENIVLATGGGAVLRPENQSFLKKRGTVIYLHASPEVLLKRTQHDTNRPLLQ 128
Query: 212 V---LPQLFALYKEMRDGYAT-ADVTV 234
V L +L LY Y + ADV V
Sbjct: 129 VDNPLAKLQELYNARDHIYRSLADVVV 155
>gi|403051714|ref|ZP_10906198.1| shikimate kinase [Acinetobacter bereziniae LMG 1003]
gi|445427018|ref|ZP_21437739.1| shikimate kinase [Acinetobacter sp. WC-743]
gi|444752120|gb|ELW76811.1| shikimate kinase [Acinetobacter sp. WC-743]
Length = 180
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 56/102 (54%), Gaps = 2/102 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+++LVG A KT +G+ LA+ L + DSD + E G S F + E+G++ ET
Sbjct: 11 NIYLVGPMGAGKTTVGRHLAELLGRDFLDSDHEI-ERKTGASIPWIFEKEGEQGFRTRET 69
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVP 195
V+ L+S LVV G GAV + N L+H GI +++ P
Sbjct: 70 IVIDDLTSKKNLVVATGGGAVTQAMNREYLKHRGIVIYLYTP 111
>gi|365174517|ref|ZP_09361965.1| hypothetical protein HMPREF1006_01668 [Synergistes sp. 3_1_syn1]
gi|363615073|gb|EHL66545.1| hypothetical protein HMPREF1006_01668 [Synergistes sp. 3_1_syn1]
Length = 551
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 71/132 (53%), Gaps = 4/132 (3%)
Query: 92 KGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQ 151
K ++ LVGM + K +GK LA + Y+D+D+L+ E G S + F + EK ++
Sbjct: 379 KRRNIVLVGMPGSGKNAVGKALALQIGMDYYDTDALI-EEREGMSTTEIFAKKGEKYFRD 437
Query: 152 AETEVLKQLSSMGRLVVCAGNGAVQSSANL-ALLRHGISLWIDVP-PGMVARMDHSGFPE 209
AETE+ K++S +G V+ G G + N AL R G +++ P ++A +D S P
Sbjct: 438 AETEIAKEVSCLGGAVISTGGGTMMRQENARALRRTGYVFFVNRPVEEILASVDLSNRPL 497
Query: 210 SEVLPQ-LFALY 220
P+ +F LY
Sbjct: 498 LAGDPKHIFKLY 509
>gi|296314607|ref|ZP_06864548.1| shikimate kinase [Neisseria polysaccharea ATCC 43768]
gi|296838649|gb|EFH22587.1| shikimate kinase [Neisseria polysaccharea ATCC 43768]
Length = 170
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+ L+G+ A KT LG+ +A L Y ++DSD + AA G F E+G++ ET
Sbjct: 8 LILIGLMGAGKTTLGRQMAQRLDYRFYDSDHEI-AAAAGVPIPTIFEMEGEQGFRSRETA 66
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVPP 196
+LK+L + +V+ G GAV N AL+R G +++ P
Sbjct: 67 ILKKLIVLPHIVLSTGGGAVLKEENRALIRKSGTVVYLHAQP 108
>gi|242278529|ref|YP_002990658.1| shikimate kinase [Desulfovibrio salexigens DSM 2638]
gi|242121423|gb|ACS79119.1| Shikimate kinase [Desulfovibrio salexigens DSM 2638]
Length = 176
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 94 TSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAE 153
++++L+G KT +GK LAD LR +FDSD ++ AG E A+ + G++ E
Sbjct: 3 SNIYLIGPRACGKTTVGKQLADKLRLEFFDSDEVLVRKAGCE-IAQYVEQHGWDGFRDLE 61
Query: 154 TEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWI 192
EVL++LS V+ G G V N LL +++I
Sbjct: 62 AEVLRELSVQQNAVISCGGGIVVREENRTLLGDNFTVYI 100
>gi|451822102|ref|YP_007458303.1| shikimate kinase AroK [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
gi|451788081|gb|AGF59049.1| shikimate kinase AroK [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
Length = 172
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 81/158 (51%), Gaps = 14/158 (8%)
Query: 94 TSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAE 153
+ ++GM + KT LGK LA+ L +FD D + E G++ + F E+ E+ ++ E
Sbjct: 3 NKIVIIGMPGSGKTTLGKMLAEELNIKFFDMDEYIVEKT-GKTTIQLF-ENGEEFFRDIE 60
Query: 154 TEVLKQLSSMGRLVVCAGNGAVQSSANLALL-RHGISLWIDVP-PGMVARMDHSGFP--- 208
+E K+L+ +++ G G ++ AN+ L + G+ ++ID P ++ +D S P
Sbjct: 61 SETCKELAGYSNVLISTGGGVIKRKANIDTLNKEGLIIFIDRPVDNILGDVDVSFRPLLK 120
Query: 209 -ESEVLPQL----FALYKEMRDGYAT--ADVTVSLQKV 239
E L +L +ALY E + +D+ V + K+
Sbjct: 121 DGKEKLLKLYDERYALYNEYAEEIVKNDSDIRVVIDKI 158
>gi|376242934|ref|YP_005133786.1| shikimate kinase [Corynebacterium diphtheriae CDCE 8392]
gi|372106176|gb|AEX72238.1| shikimate kinase [Corynebacterium diphtheriae CDCE 8392]
Length = 182
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 81/174 (46%), Gaps = 17/174 (9%)
Query: 85 ADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRES 144
+D+S ++ V LVG A KT +G+ LA+AL DSD L+ E G+ F E
Sbjct: 8 SDVSGRVRPI-VVLVGPPGAGKTTIGRRLANALNTSVVDSDVLI-EQLQGKPCGVVFAEL 65
Query: 145 DEKGYQQAETEVLK-QLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVAR-- 201
E ++ E EV+ L++ G VV G GAV + + LR I +W+DV R
Sbjct: 66 GEPNFRDLEAEVIDFALTTAG--VVSLGGGAVTTESVRQKLRAQIVVWVDVSAAEGVRRT 123
Query: 202 --------MDHSGFPE--SEVLPQLFALYKEMRDGYATADVTVSLQKVASQLGY 245
+D + E SE+L Q YKE+ D A D Q VA LG+
Sbjct: 124 AVENSRPLLDTTNPLERYSELLAQRRDFYKEVADYRAHTDGRSPQQIVADILGF 177
>gi|452820465|gb|EME27507.1| shikimate kinase [Galdieria sulphuraria]
Length = 184
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 8/159 (5%)
Query: 27 PFSLLHSQSYAPIRTSLQYSIISRKPRITTRSIADDTTSNTVTKVAAEDPSFAVKKKAAD 86
PFS + +R +Y R+ RS N+ + A+ P V +
Sbjct: 20 PFSGCFCVKTSLLRLPPKYVFFKTGRRL--RSTWSFYKDNSCSCCASGQPDVLV-----E 72
Query: 87 ISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDE 146
++ L+ ++LVGM + K+ +G+ LA L Y + D+D ++ E + + F + E
Sbjct: 73 LNQRLRKRPIYLVGMMGSGKSTIGQCLASKLSYSFLDTDQVI-EQVEQKKITQIFEQDGE 131
Query: 147 KGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLR 185
+++ E+ +L Q+ VV G G V S+N ++LR
Sbjct: 132 DKFREVESNILNQIQPCLGYVVATGGGIVLRSSNWSILR 170
>gi|296125838|ref|YP_003633090.1| shikimate kinase [Brachyspira murdochii DSM 12563]
gi|296017654|gb|ADG70891.1| Shikimate kinase [Brachyspira murdochii DSM 12563]
Length = 180
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 60/105 (57%), Gaps = 2/105 (1%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+F++G+ K+ L K LA+ L Y +D DS + E ++ F ++ E+ +++ E+E
Sbjct: 12 IFVIGLPGCGKSALSKLLAEKLNYTLYDMDSFI-EQKEEKTITDIFADNGEEYFRKVESE 70
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVPPGMV 199
VL++L+ M V+ G G V N +++ G++++ID P ++
Sbjct: 71 VLEELAGMNNAVISTGGGIVLLEKNRNIMKEKGLTIFIDRNPEII 115
>gi|217969270|ref|YP_002354504.1| shikimate kinase [Thauera sp. MZ1T]
gi|217506597|gb|ACK53608.1| Shikimate kinase [Thauera sp. MZ1T]
Length = 176
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 55/103 (53%), Gaps = 2/103 (1%)
Query: 94 TSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAE 153
+ + L+GM A KT +GK LA R + D D + A G S F E G+++ E
Sbjct: 2 SCLILIGMMGAGKTTVGKELARRRRMRFADCDQAIV-ARTGVSIPTIFELEGEAGFRRRE 60
Query: 154 TEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVP 195
T+++ +L+ LV+ G G V + N L+R GI +++DVP
Sbjct: 61 TQMIDELTREPDLVLATGGGVVVTPLNRELMRERGIVIYLDVP 103
>gi|168699806|ref|ZP_02732083.1| Shikimate kinase II [Gemmata obscuriglobus UQM 2246]
Length = 163
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Query: 109 LGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVV 168
+G+ LA+ L + +FD+D V EAA G+S F E +++ E+E L +L G V+
Sbjct: 1 MGRLLAERLGWRFFDTDDHV-EAAAGKSIRDIFATDGELAFRERESEALTELCQRGTCVI 59
Query: 169 CAGNGAVQSSANLALLR-HGISLWIDVPPGMV 199
G GAV AN LL+ G +W+ P V
Sbjct: 60 ATGGGAVLREANRELLKSSGFVVWLTATPETV 91
>gi|339010360|ref|ZP_08642930.1| shikimate kinase [Brevibacillus laterosporus LMG 15441]
gi|338772515|gb|EGP32048.1| shikimate kinase [Brevibacillus laterosporus LMG 15441]
Length = 165
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
++ T++ L+G K+ +G+ LA L Y D D + +A G ++ + F E E+ ++
Sbjct: 1 MQSTNIILIGFMGTGKSTVGEQLAQRLHYERCDLDEEIVKATG-KTIPQIFAEDGEEIFR 59
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLA-LLRHG 187
Q ET VL+QL R V+ G GAV N+ +LRHG
Sbjct: 60 QLETNVLRQLVDGNRRVIITGGGAVLRPENVQIMLRHG 97
>gi|126179244|ref|YP_001047209.1| shikimate 5-dehydrogenase [Methanoculleus marisnigri JR1]
gi|125862038|gb|ABN57227.1| shikimate dehydrogenase / shikimate kinase [Methanoculleus
marisnigri JR1]
Length = 458
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 61/126 (48%), Gaps = 11/126 (8%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
V L G KT +G LAD L ++D+D+++ E G + FR+ E ++ E E
Sbjct: 3 VVLTGFRGTGKTSVGLILADRLGLPFYDTDAMI-ERRAGMPIPEIFRQHGEAHFRALERE 61
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLA-LLRHGISLWIDVPPGM----VARMDHSGF--- 207
V+ L + V+ G GAV AN+A L RHG + PPG+ +A D G
Sbjct: 62 VVAALRT-AEGVIGTGGGAVCDPANVADLRRHGRVFLLTAPPGVIVERIAGSDRPGLTDL 120
Query: 208 -PESEV 212
PE EV
Sbjct: 121 APEEEV 126
>gi|145357115|ref|XP_001422768.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144583011|gb|ABP01085.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 170
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 84/167 (50%), Gaps = 18/167 (10%)
Query: 87 ISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDE 146
++ +L TS+FL+G+ + K+ +G LA AL Y + D+D L+ ++ ++ ++ F E+ E
Sbjct: 1 VANKLADTSLFLIGIMGSGKSTVGASLAKALGYNHLDTDELI-KSVTKKTPSELFAEAGE 59
Query: 147 KGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVARM---- 202
++ E+ +L ++++ R V+ G G V N L +G+++ + ++AR
Sbjct: 60 SEFRAIESMILAEVAAYKRCVISTGGGIVCEKTNWMHLHNGVTVRLHGDSELLARRVLAD 119
Query: 203 ----------DHSGFPE---SEVLPQLFALYKEMRDGYATADVTVSL 236
D SG + ++ ++ AL + Y AD+TV L
Sbjct: 120 GVEKRPLLSGDTSGEEQPTIDSIVAKINALLETRETMYKQADITVPL 166
>gi|313888953|ref|ZP_07822613.1| shikimate kinase [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312845126|gb|EFR32527.1| shikimate kinase [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 503
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 76/143 (53%), Gaps = 4/143 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L+GM + KT +GK LA+ L+ ++D+D L+ + G++ + F + E ++ E+
Sbjct: 341 NILLIGMPSCGKTSMGKMLAEKLKRDFYDTDDLIVKEE-GKTIPEIFEKKGESYFRDIES 399
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVARMDHSGFPESEVLP 214
++LK LS +V+ +G G N + SL I + + ++ SG P S+ L
Sbjct: 400 KILKDLSKRNGIVIASGGGTPLREENRDYISQS-SLVIYLNRDL-ENLETSGRPLSKNLE 457
Query: 215 QLFALYKEMRDGY-ATADVTVSL 236
L LY+E ++ Y A A + + +
Sbjct: 458 NLKKLYEERKEIYEALAHIKIDV 480
>gi|357038670|ref|ZP_09100467.1| Shikimate kinase [Desulfotomaculum gibsoniae DSM 7213]
gi|355359462|gb|EHG07224.1| Shikimate kinase [Desulfotomaculum gibsoniae DSM 7213]
Length = 172
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 75/152 (49%), Gaps = 7/152 (4%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L+G K+ LG+ LA L Y + D+DS + E G++ A+ FR+ E ++ E
Sbjct: 4 NIILIGFMGTGKSSLGRRLARRLGYKFIDTDSAI-EKVTGKTVAQIFRKDGEIRFRSEEK 62
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMV-ARMDHSG----FP 208
+++LS LVV G G V N+ LL+ +GI + + P ++ R+ +
Sbjct: 63 LQVRKLSGQSGLVVATGGGTVLDQENVDLLKQNGIFICLRADPEIILQRVKNKKRRPLLS 122
Query: 209 ESEVLPQLFALYKEMRDGYATADVTVSLQKVA 240
++ + L KE Y A++TV K++
Sbjct: 123 RGDLWENITRLLKERDSSYEIAELTVDTGKLS 154
>gi|406989910|gb|EKE09619.1| hypothetical protein ACD_16C00130G0024 [uncultured bacterium]
Length = 196
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 75/150 (50%), Gaps = 15/150 (10%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ LVGM A K+ +G +A L + D+D V E A G S A F EK ++ AE
Sbjct: 28 TLVLVGMMGAGKSSIGWRIAHKLGLPFNDTDQEV-ERAAGCSVADIFETWGEKAFRDAER 86
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVPPGM----VARMD-----H 204
V+K+L S V+ G+GA S + L++ ISLW+ P + V+R D
Sbjct: 87 RVIKRLLSAKIQVISTGDGAFLDSESRELIKESAISLWLRADPNILYERVSRRDTRPLLF 146
Query: 205 SGFPESEVLPQLFALYKEMRDGYATADVTV 234
G P+ E+L ++ + YA AD+TV
Sbjct: 147 DGNPK-EILEEMIERRYPI---YAEADLTV 172
>gi|291286005|ref|YP_003502821.1| shikimate kinase [Denitrovibrio acetiphilus DSM 12809]
gi|290883165|gb|ADD66865.1| Shikimate kinase [Denitrovibrio acetiphilus DSM 12809]
Length = 171
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+++L+G K+ +G+ LA+ L Y D+D +V E G E F E E+ +++ ET
Sbjct: 3 NIYLIGFMGTGKSSVGRLLAEDLGASYVDTDQMVIEKTGRE-ITNIFEEDSEEDFRRLET 61
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRH 186
EVL ++ LVV G G V + NL +R
Sbjct: 62 EVLSEVVDKENLVVSTGGGIVVTMGNLEAMRQ 93
>gi|354598807|ref|ZP_09016824.1| Shikimate kinase [Brenneria sp. EniD312]
gi|353676742|gb|EHD22775.1| Shikimate kinase [Brenneria sp. EniD312]
Length = 173
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 20/166 (12%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+F+VG KT +G LA AL Y + D+D L + +G + A+ + +G++Q E+
Sbjct: 5 IFMVGARGCGKTTVGSRLAQALGYEFIDTD-LFMQQSGRMTVAEIVAQEGWQGFRQRESR 63
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALL-RHGISLWIDVPPGMVAR------MDH---- 204
VL+++++ R VV G G V S+ N + G +++ P ++AR +DH
Sbjct: 64 VLQEVTAC-RRVVATGGGIVLSALNRRFMGDKGSVVYLHAPAELLARRLEASPLDHQRPT 122
Query: 205 -SGFPESE----VLPQLFALYKEMRDGY--ATADVTVSLQKVASQL 243
+G P +E VL ALY+E+ AT D T+ ++ V L
Sbjct: 123 LTGRPIAEEMADVLAAREALYREVAHHVIDATQDPTIIVENVMRML 168
>gi|349573635|ref|ZP_08885611.1| shikimate kinase [Neisseria shayeganii 871]
gi|348014794|gb|EGY53662.1| shikimate kinase [Neisseria shayeganii 871]
Length = 182
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 85/183 (46%), Gaps = 19/183 (10%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FL+G+ A KT GK LA L Y + DSD + + G S A F E G++ ET
Sbjct: 10 NIFLIGLMGAGKTTQGKRLASLLHYPFIDSDQEIVQRT-GVSIATIFELEGENGFRNRET 68
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMV---ARMDHSG--FP 208
V+ +LS +V+ G GAV N L+ G +++ P ++ + D S
Sbjct: 69 AVIDELSRRRPVVLATGGGAVLREENRGYLKSRGTVVYLHAVPEVLYQRVKTDKSRPLLQ 128
Query: 209 ESEVLPQLFALYKEMRDGY---ATADVTVSLQKVASQLGYDDLDAVTTEDMTLEVKWLYN 265
++ L +L LY++ Y A V V+ Q++ Q T D+ L++K +
Sbjct: 129 VTDPLGKLSELYQQRDPLYRDTAHIVVNVTAQQLCQQ---------ATRDLLLQLKQYFA 179
Query: 266 ASI 268
+ I
Sbjct: 180 SKI 182
>gi|374372897|ref|ZP_09630558.1| Shikimate kinase [Niabella soli DSM 19437]
gi|373234973|gb|EHP54765.1| Shikimate kinase [Niabella soli DSM 19437]
Length = 168
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
++L+G A KTH GK L+ + Y+D D LV E+ G+ + F E+ E+ ++ E E
Sbjct: 3 IYLIGFMGAGKTHWGKQLSKKMELPYYDLDDLVIESE-GKPINQIFEENGEEYFRMREKE 61
Query: 156 VLKQLS-SMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVP 195
VL ++ S L++ G GA N+ + HG+++W++ P
Sbjct: 62 VLYMITESHPDLLLSCGGGAPCYFNNIDYMNAHGVTVWLNTP 103
>gi|119899934|ref|YP_935147.1| shikimate kinase [Azoarcus sp. BH72]
gi|119672347|emb|CAL96261.1| probable shikimate kinase [Azoarcus sp. BH72]
Length = 178
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
Query: 94 TSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAE 153
+ + L+GM A KT +G+ LA + D D + A G S F E G+++ E
Sbjct: 4 SCLILIGMMGAGKTTVGRELAKRRGMRFVDCDHEIV-ARTGVSIPTIFEIEGEAGFRRRE 62
Query: 154 TEVLKQLSSMGRLVVCAGNGAVQSSANLALL-RHGISLWIDVPP 196
+ + +L+ G L++ G G V AN ALL + GI ++++VPP
Sbjct: 63 AQTIDELTREGELILATGGGVVLDPANRALLAQRGIVVYLNVPP 106
>gi|83590399|ref|YP_430408.1| shikimate kinase [Moorella thermoacetica ATCC 39073]
gi|115312153|sp|Q2RI74.1|AROK_MOOTA RecName: Full=Shikimate kinase; Short=SK
gi|83573313|gb|ABC19865.1| shikimate kinase [Moorella thermoacetica ATCC 39073]
Length = 173
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 73/147 (49%), Gaps = 10/147 (6%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L+G + KT +G+ LA L + + D+D++V E G + F E+ +++ E
Sbjct: 4 NIVLIGFMGSGKTTVGRLLARDLGWSFLDTDTMVEERLG-LPVKEIFAREGEEFFREVEK 62
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGIS-LWIDVPPGMVARMDHSGFPESEVL 213
E + ++++ + V+ G GAV N+ LLR G +W+ V P + +G +S L
Sbjct: 63 EAVARVATARQAVIATGGGAVLCGVNVKLLREGNKVVWLQVRPETA--LKRAGLDDSRPL 120
Query: 214 PQ------LFALYKEMRDGYATADVTV 234
Q + AL + YA AD+ +
Sbjct: 121 LQGREPRDIAALLRRREPYYAFADIYI 147
>gi|149202770|ref|ZP_01879742.1| shikimate kinase [Roseovarius sp. TM1035]
gi|149144052|gb|EDM32086.1| shikimate kinase [Roseovarius sp. TM1035]
Length = 193
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 57/102 (55%), Gaps = 2/102 (1%)
Query: 93 GTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQA 152
G +V LVGM A KT +GK LA + + DSD+ + E A + ++ F+ E ++
Sbjct: 17 GKTVVLVGMMGAGKTAVGKALAARIGVPFLDSDAEI-EKAANMAISEIFQRDGETFFRAR 75
Query: 153 ETEVLKQLSSMGRLVVCAGNGAVQSSANLALL-RHGISLWID 193
ETEV+ +L R ++ G GA + N L+ R G+S+W+D
Sbjct: 76 ETEVIDRLLDGPRAILSTGGGAFLAERNRDLVARKGVSVWLD 117
>gi|261378268|ref|ZP_05982841.1| shikimate kinase [Neisseria cinerea ATCC 14685]
gi|269145357|gb|EEZ71775.1| shikimate kinase [Neisseria cinerea ATCC 14685]
Length = 170
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+ L+G+ A KT LG+ +A +L Y ++D D V AA G S F E+G++ ET
Sbjct: 8 LILIGLMGAGKTTLGRQVARSLNYCFYDCDHEV-SAAAGVSIPTIFEMEGEQGFRLRETA 66
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVPP 196
+LK+L + +V+ G GAV N L+R G +++ P
Sbjct: 67 MLKKLVILPHIVLSTGGGAVLKEENRNLIRKSGTVVYLHAQP 108
>gi|347761774|ref|YP_004869335.1| shikimate kinase [Gluconacetobacter xylinus NBRC 3288]
gi|347580744|dbj|BAK84965.1| shikimate kinase / 3-dehydroquinate synthase [Gluconacetobacter
xylinus NBRC 3288]
Length = 585
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 61/112 (54%), Gaps = 3/112 (2%)
Query: 93 GTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQA 152
G ++ +VG+ A KT +G+ LA L + DSD + E A G S A F++ E +++
Sbjct: 45 GQTIVMVGLMGAGKTTIGRILAARLGLPFVDSDEEI-ERAAGCSIADLFQKYGEPEFRRG 103
Query: 153 ETEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVP-PGMVARM 202
E V+++L S +V+ G GA A +R H +S+W+ P P +V R+
Sbjct: 104 ERLVIRRLLSGPPVVLATGGGAFMDPRTRASVRAHAVSIWLRCPLPLLVQRV 155
>gi|87122895|ref|ZP_01078762.1| probable Shikimate kinase [Marinomonas sp. MED121]
gi|86161821|gb|EAQ63119.1| probable Shikimate kinase [Marinomonas sp. MED121]
Length = 180
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 55/94 (58%), Gaps = 2/94 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ LVG A KT +G+ L+ +L +FDSD ++ E AG + F + E+G+++ ET
Sbjct: 6 NIILVGPMGAGKTTIGRLLSQSLGREFFDSDRVIEENAGAD-IPWIFDKEGEEGFRRRET 64
Query: 155 EVLKQLS-SMGRLVVCAGNGAVQSSANLALLRHG 187
+ L++L+ G +V+ G GAV N +LR G
Sbjct: 65 QALQELTKEYGAIVMATGGGAVMLDENRDILRQG 98
>gi|408376457|ref|ZP_11174062.1| shikimate kinase [Agrobacterium albertimagni AOL15]
gi|407749924|gb|EKF61435.1| shikimate kinase [Agrobacterium albertimagni AOL15]
Length = 196
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 84/177 (47%), Gaps = 18/177 (10%)
Query: 76 PSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGE 135
PS V+ K A L ++ LVG+ A K+ +G+ +A L + D+D+ + E
Sbjct: 10 PSLGVRAKTA-----LGKRNLVLVGLMGAGKSAIGRIVAQQLGLPFVDTDTEI-ERVSRM 63
Query: 136 SAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGA-VQSSANLALLRHGISLW--- 191
+ A+ F E+ ++ ET V+K+L G VV G GA + + R G+S+W
Sbjct: 64 TIAELFAAYGEEEFRALETRVIKRLLRTGPRVVSTGGGAFINERTRKQIERGGLSVWLNA 123
Query: 192 -IDVPPGMVARMDHSGFPESEVLPQLFALYKEMRDG----YATADVTVSLQKVASQL 243
+DV V + DH ++E Q K++ D YA AD+TV + V ++
Sbjct: 124 DLDVLWERVNKRDHRPLLKTENPKQTL---KDLMDKRYPIYALADITVQSRDVRKEV 177
>gi|406036782|ref|ZP_11044146.1| shikimate kinase [Acinetobacter parvus DSM 16617 = CIP 108168]
Length = 186
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 56/102 (54%), Gaps = 2/102 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+++LVG A KT +G+ LA+ L + DSD + E G + F + E G++ ET
Sbjct: 17 NIYLVGPMGAGKTTVGRHLAELLGRDFLDSDHEI-ERKTGATIPWIFEKEGEAGFRLRET 75
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVP 195
VL +L++ LV+ G GAV SAN L+ GI +++ P
Sbjct: 76 NVLNELTTRSALVLATGGGAVTQSANREFLKQRGIVVYLYTP 117
>gi|257095714|ref|YP_003169355.1| shikimate kinase [Candidatus Accumulibacter phosphatis clade IIA
str. UW-1]
gi|257048238|gb|ACV37426.1| Shikimate kinase [Candidatus Accumulibacter phosphatis clade IIA
str. UW-1]
Length = 178
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+V+LVG+ A KT +GK LA L Y + DSD + EA G S F E+G+++ E
Sbjct: 9 NVYLVGLMGAGKTTIGKALARRLAYGFVDSDHEI-EARTGVSLPTIFEIEGEEGFRRREA 67
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVP 195
V+ L+ +G VV G G V N L+ G +++DVP
Sbjct: 68 LVIADLARLGGQVVATGGGVVLRPDNRENLKDSGFVIYLDVP 109
>gi|87125217|ref|ZP_01081063.1| Shikimate kinase [Synechococcus sp. RS9917]
gi|86166986|gb|EAQ68247.1| Shikimate kinase [Synechococcus sp. RS9917]
Length = 201
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 62/119 (52%), Gaps = 4/119 (3%)
Query: 75 DPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGG 134
DPS + + L G +++LVGM + K+ G+ LA +L Y + D+D+ V E G
Sbjct: 3 DPSQPLPHP---LKARLGGRNLYLVGMMGSGKSSSGRPLAASLDYGFVDADA-VIEQVAG 58
Query: 135 ESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWID 193
S F E E+G++ E++VL+ + LVV G G V N +L G+ +W+D
Sbjct: 59 RSIPHLFEEEGEEGFRDLESQVLQAIGQRHSLVVATGGGIVTRPENWGVLHQGLVVWLD 117
>gi|386332199|ref|YP_006028368.1| shikimate kinase [Ralstonia solanacearum Po82]
gi|334194647|gb|AEG67832.1| shikimate kinase [Ralstonia solanacearum Po82]
Length = 190
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
Query: 94 TSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAE 153
++VF VG+ A KT +G+ +A L +FDSD V EA G F E G++ E
Sbjct: 4 SNVFFVGLMGAGKTTVGRAVARRLDLPFFDSDHEV-EARCGVRVPVIFEHEGEMGFRDRE 62
Query: 154 TEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPP 196
T V+ +L++ +V+ G GAV + N A LR G +++ P
Sbjct: 63 THVIDELTARHGVVLATGGGAVLRAENRAFLRERGTVIYLRANP 106
>gi|375290999|ref|YP_005125539.1| shikimate kinase [Corynebacterium diphtheriae 241]
gi|376245830|ref|YP_005136069.1| shikimate kinase [Corynebacterium diphtheriae HC01]
gi|376251414|ref|YP_005138295.1| shikimate kinase [Corynebacterium diphtheriae HC03]
gi|376257229|ref|YP_005145120.1| shikimate kinase [Corynebacterium diphtheriae VA01]
gi|371580670|gb|AEX44337.1| shikimate kinase [Corynebacterium diphtheriae 241]
gi|372108460|gb|AEX74521.1| shikimate kinase [Corynebacterium diphtheriae HC01]
gi|372112918|gb|AEX78977.1| shikimate kinase [Corynebacterium diphtheriae HC03]
gi|372119746|gb|AEX83480.1| shikimate kinase [Corynebacterium diphtheriae VA01]
Length = 182
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 82/174 (47%), Gaps = 17/174 (9%)
Query: 85 ADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRES 144
+D+S ++ V LVG A KT +G+ LA+AL DSD L+ E G+ F E
Sbjct: 8 SDVSGRVRPI-VVLVGPPGAGKTTIGRRLANALNTSVVDSDVLI-EQLQGKPCGVVFAEL 65
Query: 145 DEKGYQQAETEVLK-QLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGM-VAR- 201
E ++ E EV+ L++ G VV G GAV + + LR I +W+DV V R
Sbjct: 66 GEPNFRDLEAEVIDFALTTAG--VVSLGGGAVTTESVRQKLREQIVVWVDVSAAEGVHRT 123
Query: 202 --------MDHSGFPE--SEVLPQLFALYKEMRDGYATADVTVSLQKVASQLGY 245
+D + E SE+L Q YKE+ D A D Q VA LG+
Sbjct: 124 AVENSRPLLDTTNPLERYSELLAQRRDFYKEVADYRAHTDGRSPQQIVADILGF 177
>gi|94312938|ref|YP_586147.1| shikimate kinase I [Cupriavidus metallidurans CH34]
gi|93356790|gb|ABF10878.1| shikimate kinase I [Cupriavidus metallidurans CH34]
Length = 196
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 59/112 (52%), Gaps = 2/112 (1%)
Query: 83 KAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFR 142
+ A + + G ++F +G A KT +G+ +A L +FD+D + E G A F
Sbjct: 10 QRAILDQQTSGDNLFFIGFMGAGKTTIGRAVAHELGRPFFDTDHEI-ETRCGVRIATIFE 68
Query: 143 ESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
E+G++Q E+ VL +L+ +V+ G GAV N A+LR G +++D
Sbjct: 69 LEGEEGFRQRESRVLDELTQRSGIVLATGGGAVLRPENRAMLRARGQVVYLD 120
>gi|38233930|ref|NP_939697.1| shikimate kinase [Corynebacterium diphtheriae NCTC 13129]
gi|376293358|ref|YP_005165032.1| shikimate kinase [Corynebacterium diphtheriae HC02]
gi|81401384|sp|Q6NH03.1|AROK_CORDI RecName: Full=Shikimate kinase; Short=SK
gi|38200191|emb|CAE49872.1| shikimate kinase [Corynebacterium diphtheriae]
gi|372110681|gb|AEX76741.1| shikimate kinase [Corynebacterium diphtheriae HC02]
Length = 173
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 75/163 (46%), Gaps = 16/163 (9%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
V LVG + KT +G+ LA+AL DSD L+ E G+ F E E ++ E E
Sbjct: 9 VVLVGPPGSGKTTIGRRLANALNTSVVDSDVLI-EQLQGKPCGVVFAELGEPNFRDLEAE 67
Query: 156 VLK-QLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVAR----------MDH 204
V+ L++ G VV G GAV + + LR I +W+DV R +D
Sbjct: 68 VIDFALTTAG--VVSLGGGAVTTESVRQKLRAQIVVWVDVSAAEGVRRTAVENSRPLLDT 125
Query: 205 SGFPE--SEVLPQLFALYKEMRDGYATADVTVSLQKVASQLGY 245
+ E SE+L Q YKE+ D A D Q VA LG+
Sbjct: 126 TNPLERYSELLAQRRDFYKEVADYRAHTDGRSPQQIVADILGF 168
>gi|83951801|ref|ZP_00960533.1| shikimate kinase [Roseovarius nubinhibens ISM]
gi|83836807|gb|EAP76104.1| shikimate kinase [Roseovarius nubinhibens ISM]
Length = 196
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+V +VGM A KT +G+ LA L + DSD+ + EAA S A+ F E ++ ET
Sbjct: 22 TVVMVGMMGAGKTAVGRALATRLGVPFLDSDAEI-EAAATMSIAEIFERDGEAFFRDRET 80
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALL-RHGISLWID 193
EV+ +L R ++ G GA S N ++ + G+S+W+D
Sbjct: 81 EVIDRLLENQRGILSTGGGAFLSERNRQIISQKGVSVWLD 120
>gi|350560632|ref|ZP_08929472.1| Shikimate kinase [Thioalkalivibrio thiocyanoxidans ARh 4]
gi|349782900|gb|EGZ37183.1| Shikimate kinase [Thioalkalivibrio thiocyanoxidans ARh 4]
Length = 184
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 54/101 (53%), Gaps = 1/101 (0%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+V LVG A K+ +G+ LA L+ + D+D+ + E G F E+G++Q ET
Sbjct: 3 NVVLVGPMGAGKSTIGRGLAAVLKRSFVDADAEI-EKRTGVDIPTIFEFEGEEGFRQRET 61
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVP 195
E+L++L +V+ G GAV N LL+ L++ VP
Sbjct: 62 EMLRELLERENIVLATGGGAVMRPENRELLKQHCVLYLRVP 102
>gi|260426001|ref|ZP_05779980.1| shikimate kinase [Citreicella sp. SE45]
gi|260420493|gb|EEX13744.1| shikimate kinase [Citreicella sp. SE45]
Length = 185
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 75/147 (51%), Gaps = 7/147 (4%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+V LVGM A KT +GK LA ALR + DSD+ + E A + A+ F E +++ E+
Sbjct: 9 TVVLVGMMGAGKTAVGKALAHALRVPFRDSDAEI-ELAANMTIAEIFSRDGEPFFRERES 67
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALL-RHGISLWIDVP-PGMVARMDHSG----FP 208
+V+ +L V+ G GA N ++ + G+++W+D P + R+ H
Sbjct: 68 QVIARLLDGRPSVLSTGGGAYMREENRRMITKRGVAVWLDAALPVLWNRVKHKDTRPLLR 127
Query: 209 ESEVLPQLFALYKEMRDGYATADVTVS 235
++ L +Y + YA +D+TVS
Sbjct: 128 TADPHATLREIYCKRVPIYALSDLTVS 154
>gi|74620637|sp|Q8J294.1|ARO1_THACU RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName:
Full=Shikimate dehydrogenase
gi|25005077|gb|AAN70992.1|AF482690_1 arom polypeptide [Thanatephorus cucumeris]
Length = 1618
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ +VGM A KTH+G A +L + + D+D VFE GE ++ R ++QAE+
Sbjct: 896 TIIIVGMRGAGKTHIGGIAAASLGWKFIDADH-VFEGRTGELVSQYVRSKGWTAFRQAES 954
Query: 155 EVLKQL--SSMGRLVVCAGNGAVQSSANLALL 184
++++ L + R ++ G G V+S N ALL
Sbjct: 955 QIIQDLLAENPTRTIISTGGGIVESPLNRALL 986
>gi|329905847|ref|ZP_08274235.1| bifunctional 3-dehydroquinate synthase/shikimate kinase
[Oxalobacteraceae bacterium IMCC9480]
gi|327547487|gb|EGF32303.1| bifunctional 3-dehydroquinate synthase/shikimate kinase
[Oxalobacteraceae bacterium IMCC9480]
Length = 568
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FL+G+ + KT +G+ LA L + DSD + EA G S F E ++Q E
Sbjct: 4 NIFLIGLMGSGKTTVGRALARKLNKRFIDSDHEI-EARTGASIPVIFEVEGEASFRQREA 62
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALL 184
EV+K L+++ +V+ G GA+ + A+ ALL
Sbjct: 63 EVIKDLTALDDIVLATGGGAILNPASRALL 92
>gi|17547689|ref|NP_521091.1| shikimate kinase [Ralstonia solanacearum GMI1000]
gi|81503041|sp|Q8XV61.1|AROK_RALSO RecName: Full=Shikimate kinase; Short=SK
gi|17429994|emb|CAD16679.1| probable shikimate kinaseIprotein [Ralstonia solanacearum GMI1000]
Length = 190
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
Query: 94 TSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAE 153
++VF VG+ A KT +G+ +A L +FDSD + EA G F E G++ E
Sbjct: 4 SNVFFVGLMGAGKTTVGRAVARRLDLPFFDSDHEI-EARCGVRVPVIFEHEGEMGFRDRE 62
Query: 154 TEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPP 196
T+++ +L++ +VV G GAV N A LR G +++ P
Sbjct: 63 TQMIDELTARHGVVVATGGGAVLRPENRAFLRERGTVIYLRANP 106
>gi|389696013|ref|ZP_10183655.1| shikimate kinase [Microvirga sp. WSM3557]
gi|388584819|gb|EIM25114.1| shikimate kinase [Microvirga sp. WSM3557]
Length = 216
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 67/135 (49%), Gaps = 5/135 (3%)
Query: 62 DTTSNTVTKVAAEDP---SFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALR 118
D NT+++ + D ++ +S L S+ LVG+ A K+ +G+ LA AL+
Sbjct: 4 DIHMNTISRFNSLDEVGGQNQASQRGHPVSRLLGTRSIVLVGLMGAGKSTVGRRLAQALK 63
Query: 119 YYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGA-VQS 177
+ D+D + EAA G + + F E+ ++ E V+ +L G +V+ G GA +
Sbjct: 64 LPFRDADHEI-EAAAGMTIPEIFAIHGEEHFRDGERRVIARLLQDGPIVLATGGGAFMNE 122
Query: 178 SANLALLRHGISLWI 192
+ HGISLW+
Sbjct: 123 ETRRRIAEHGISLWL 137
>gi|421890498|ref|ZP_16321356.1| Shikimate kinase (SK) [Ralstonia solanacearum K60-1]
gi|378964108|emb|CCF98104.1| Shikimate kinase (SK) [Ralstonia solanacearum K60-1]
Length = 214
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
L ++VF VG+ A KT +G+ +A L +FDSD + EA G F E G++
Sbjct: 25 LSVSNVFFVGLMGAGKTTVGRAVARRLDLPFFDSDHEI-EARCGVRVPVIFEHEGEMGFR 83
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPP 196
ET+V+ +L++ +V+ G GAV N A LR G +++ P
Sbjct: 84 DRETQVIDELTARHGVVLATGGGAVLRPENRAFLRERGTVIYLRANP 130
>gi|291278864|ref|YP_003495699.1| shikimate kinase [Deferribacter desulfuricans SSM1]
gi|290753566|dbj|BAI79943.1| shikimate kinase [Deferribacter desulfuricans SSM1]
Length = 166
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 2/103 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+++L+G KT +GK LA L + D D L+ E G + + FRE E+ +++ ET
Sbjct: 2 NIYLIGFMGTGKTTVGKALALKLNKKFSDLDDLIVEKTG-KQIVEIFREDGEEEFRKIET 60
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPP 196
EVLK ++ VV G G + + N +++ +G+ + + P
Sbjct: 61 EVLKDINEKDNFVVATGGGVLTTEGNYEIMKSNGVIITLAASP 103
>gi|225174905|ref|ZP_03728902.1| Shikimate kinase [Dethiobacter alkaliphilus AHT 1]
gi|225169545|gb|EEG78342.1| Shikimate kinase [Dethiobacter alkaliphilus AHT 1]
Length = 171
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 54/104 (51%), Gaps = 2/104 (1%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
+ G ++ L+G KT +G+ LAD L + D+D + E G S + F E+ ++
Sbjct: 4 ISGKNLVLIGFMGTGKTEVGRLLADLLNRRFVDTDRRISEREG-MSIPELFAARGEQYFR 62
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
AE EV+ +L+S LVV G G V N+ LR G +W+D
Sbjct: 63 AAEKEVVAELASQKGLVVSTGGGVVLDGGNVEHLRLSGFVVWLD 106
>gi|126666715|ref|ZP_01737692.1| shikimate kinase [Marinobacter sp. ELB17]
gi|126628760|gb|EAZ99380.1| shikimate kinase [Marinobacter sp. ELB17]
Length = 188
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
V LVG A K+ +G+ LA L Y + D+D ++ E G + F E G++Q ET
Sbjct: 7 VILVGPMGAGKSTIGRMLARELDYRFLDTDRIIEERCGA-NIPWIFDVEGEDGFRQRETA 65
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLR 185
+L +LS+ +++ G GAV N LLR
Sbjct: 66 MLSELSTEAGIILATGGGAVMRDVNHELLR 95
>gi|397654122|ref|YP_006494805.1| shikimate kinase [Corynebacterium ulcerans 0102]
gi|393403078|dbj|BAM27570.1| shikimate kinase [Corynebacterium ulcerans 0102]
Length = 198
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 55/101 (54%), Gaps = 4/101 (3%)
Query: 97 FLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQ-AETE 155
LVG A KT +GK LA+AL + D+DSL+ E + G+ FR+ E +++ E +
Sbjct: 33 VLVGPPGAGKTTVGKRLANALHTTFVDTDSLI-EQSAGQPCGVIFRQMGEPEFRKLEENK 91
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPP 196
V + L + G VV G GAV S +LL +WIDV P
Sbjct: 92 VREALGTSG--VVSLGGGAVLSPLTRSLLLGHTVIWIDVNP 130
>gi|451823409|ref|YP_007459683.1| shikimate kinase [Candidatus Kinetoplastibacterium desouzaii
TCC079E]
gi|451776209|gb|AGF47250.1| shikimate kinase [Candidatus Kinetoplastibacterium desouzaii
TCC079E]
Length = 206
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 67/126 (53%), Gaps = 8/126 (6%)
Query: 64 TSNTVTKVAAE--DPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYY 121
T TV+K + D + + KK ++ K TS+FL+GM A K+ +G+ LA + +
Sbjct: 12 TKPTVSKAIHQSIDNNNVISKKYSN-----KNTSIFLIGMMGAGKSTVGRCLAQYIGKKF 66
Query: 122 FDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANL 181
D DS + E A G + F E G+++ ET++L+++S +V+ G GAV + N
Sbjct: 67 VDLDSEI-EIACGVNIPVIFEIEGEDGFRKRETDILQKISLEKNIVLATGGGAVLAEDNR 125
Query: 182 ALLRHG 187
LL G
Sbjct: 126 HLLTSG 131
>gi|257126414|ref|YP_003164528.1| shikimate kinase [Leptotrichia buccalis C-1013-b]
gi|257050353|gb|ACV39537.1| Shikimate kinase [Leptotrichia buccalis C-1013-b]
Length = 164
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 78/165 (47%), Gaps = 11/165 (6%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L+GM K+ +G +L+ + Y D+D E + F E+ +++ ET
Sbjct: 3 NIVLIGMPACGKSTIGYWLSKKINYPILDADKY-LEEKENRVISDIFSNEGEEYFRELET 61
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALL-RHGISLWIDVPPGMVARMDHSGFPESEVL 213
+ LK+LS +++ G GAV+ N+ +L ++GI ++++ + + +H P + +
Sbjct: 62 KYLKELSEKNGIIISTGGGAVKKKENIDILKKNGIVVFLNREIADIYKENHEKRPLLKNI 121
Query: 214 PQLFALYKEMRDGYAT-ADVTVSLQKVASQLGYDDLDAVTTEDMT 257
+ LY E D Y AD+ V DD+D + +T
Sbjct: 122 NNIQKLYDERIDLYRKYADIIVK--------NNDDMDIIVDRIVT 158
>gi|134294487|ref|YP_001118222.1| shikimate kinase [Burkholderia vietnamiensis G4]
gi|134137644|gb|ABO53387.1| shikimate kinase [Burkholderia vietnamiensis G4]
Length = 184
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 55/103 (53%), Gaps = 2/103 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+VF VG+ A KT +G+ +A L +FDSD + EA G F E G++ E+
Sbjct: 9 NVFFVGLMGAGKTTVGRAVARRLDRTFFDSDHEI-EARTGARIPVIFEMEGEAGFRDRES 67
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPP 196
+V+ +L+ +V+ G GAV + N L+ HGI +++ P
Sbjct: 68 QVIAELTQRENIVLATGGGAVLRAENRECLKNHGIVIYLRANP 110
>gi|238025977|ref|YP_002910208.1| Shikimate kinase [Burkholderia glumae BGR1]
gi|237875171|gb|ACR27504.1| Shikimate kinase [Burkholderia glumae BGR1]
Length = 201
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
SVF VG+ A KT +G+ +A L +FDSD + EA G F E G++ E
Sbjct: 26 SVFFVGLMGAGKTTVGRAVARRLDRPFFDSDHEI-EARTGTRIPVIFELEGETGFRDREE 84
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPP 196
+++ +L+ G +V+ G GAV AN LR GI +++ P
Sbjct: 85 KMIHELTLRGNVVLATGGGAVMRPANRDALRSRGIVIYLRANP 127
>gi|383641000|ref|ZP_09953406.1| shikimate kinase [Sphingomonas elodea ATCC 31461]
Length = 179
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 57/109 (52%), Gaps = 2/109 (1%)
Query: 93 GTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQA 152
G + LVG+ A KT +G+ LA LR + D+D+ + E+A G S + F + E ++
Sbjct: 13 GKPIVLVGLMGAGKTTVGRRLAQRLRLPFVDADAEI-ESAAGMSVSDIFAKFGEPHFRDG 71
Query: 153 ETEVLKQLSSMGRLVVCAGNGAVQSSANLAL-LRHGISLWIDVPPGMVA 200
E V+ +L V+ G GA + AL L IS+W+D P ++A
Sbjct: 72 ERRVIARLVDGTPKVIATGGGAFINDETRALILGQAISIWLDAEPTVLA 120
>gi|262370668|ref|ZP_06063993.1| shikimate kinase [Acinetobacter johnsonii SH046]
gi|381198009|ref|ZP_09905348.1| shikimate kinase [Acinetobacter lwoffii WJ10621]
gi|262314468|gb|EEY95510.1| shikimate kinase [Acinetobacter johnsonii SH046]
Length = 177
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 56/102 (54%), Gaps = 2/102 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+++LVG A KT +G+ LA+ L + DSD + E G + F + E G++ ET
Sbjct: 11 NIYLVGPMGAGKTTVGRHLAELLGREFLDSDHEI-ERKTGATIPWIFEKEGELGFRSRET 69
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVP 195
V+ +L+S LV+ G GAV + N A L+ GI +++ P
Sbjct: 70 VVIDELTSRPNLVLATGGGAVTQAPNRAFLKQRGIVVYLYTP 111
>gi|110680277|ref|YP_683284.1| shikimate kinase [Roseobacter denitrificans OCh 114]
gi|109456393|gb|ABG32598.1| shikimate kinase, putative [Roseobacter denitrificans OCh 114]
Length = 197
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 73/146 (50%), Gaps = 7/146 (4%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+V ++GM A KT +G+ LA L + DSD + EAA + + F E ++ E+
Sbjct: 22 TVVMIGMMGAGKTAVGRALAQLLDVPFLDSDHEI-EAAANMTVPEIFARDGEAFFRARES 80
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMV-ARMDHSG----FP 208
EV+ +L V+ G GA + AN A + G+S+W+D ++ +R+ H
Sbjct: 81 EVINRLLGGQACVLSTGGGAFLAEANRAAISARGVSVWLDADIDLLWSRVKHRDTRPLLR 140
Query: 209 ESEVLPQLFALYKEMRDGYATADVTV 234
++ L AL++ YA AD+TV
Sbjct: 141 TADPKATLTALFETRVPEYAKADITV 166
>gi|434387800|ref|YP_007098411.1| shikimate kinase [Chamaesiphon minutus PCC 6605]
gi|428018790|gb|AFY94884.1| shikimate kinase [Chamaesiphon minutus PCC 6605]
Length = 202
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 75/169 (44%), Gaps = 28/169 (16%)
Query: 90 ELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAG--------------GE 135
+L+G +++L+GM K+ + LAD L Y + D+D + ++ E
Sbjct: 3 DLQGLNIYLIGMMGCGKSTVAPLLADRLGYNFLDTDITLAKSCAKPLGYDFEDTDLSESE 62
Query: 136 SAAKAFRE----SDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLW 191
AK RE E ++ ET+VL ++S+ RLVV G G N L G+ +W
Sbjct: 63 LIAKIIRELFQTVGEPEFRAIETQVLAEVSAYTRLVVATGGGIAIERENWNHLHQGLVIW 122
Query: 192 IDVPPG---MVARMD----HSGFPESEVL-PQLFALYKEMRDGYATADV 232
+D P +V R+ SE L +L L E R YA AD+
Sbjct: 123 LD--PAVDLLVERLQGDTTRPILANSEDLQSKLDQLLSERRYRYAEADI 169
>gi|339503832|ref|YP_004691252.1| shikimate kinase [Roseobacter litoralis Och 149]
gi|338757825|gb|AEI94289.1| putative shikimate kinase [Roseobacter litoralis Och 149]
Length = 197
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 72/146 (49%), Gaps = 7/146 (4%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ ++GM A KT +G+ LA L + DSD + EAA S + F E ++ E+
Sbjct: 22 TIVMIGMMGAGKTAVGRALAQLLDVPFLDSDHEIEEAA-NMSVPEIFARDGEAFFRARES 80
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMV-ARMDHSGFPESEV 212
EV+ +L S V+ G GA + AN A + G+S+W+D ++ R+ H
Sbjct: 81 EVINRLLSGQACVLSTGGGAFLAEANRAAISARGVSVWLDADIELLWNRVKHRDTRPLLR 140
Query: 213 LPQ----LFALYKEMRDGYATADVTV 234
P L ALY+ YA AD+TV
Sbjct: 141 TPDPKATLSALYETRVPEYAKADMTV 166
>gi|440288821|ref|YP_007341586.1| shikimate kinase [Enterobacteriaceae bacterium strain FGI 57]
gi|440048343|gb|AGB79401.1| shikimate kinase [Enterobacteriaceae bacterium strain FGI 57]
Length = 174
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 67/123 (54%), Gaps = 6/123 (4%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+FL+G KT +G+ L +A +++ D+D ++ + AG A RE G++ ET+
Sbjct: 5 IFLIGARGCGKTTIGQRLTNACNFHFVDTDQVLQQRAGMTVADIVVREG-WAGFRARETQ 63
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMVA-RMDHSGFPESEVL 213
L+ ++ G VV G G + + N +R +G+ ++++ P ++A R++ FPE+
Sbjct: 64 TLQHVTQPG-TVVATGGGIILAEVNRDFMRQNGVVIYLNAPVSVLAGRLE--AFPEASQR 120
Query: 214 PQL 216
P L
Sbjct: 121 PTL 123
>gi|408419443|ref|YP_006760857.1| shikimate kinase AroK [Desulfobacula toluolica Tol2]
gi|405106656|emb|CCK80153.1| AroK: shikimate kinase [Desulfobacula toluolica Tol2]
Length = 186
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
Query: 86 DISTELK-GTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRES 144
++ ELK +FL G KT +GK LAD L + + D+D V E G S K +
Sbjct: 4 ELKPELKPDMKIFLTGYRCTGKTTIGKLLADQLEFDFMDTDR-VIEQQTGSSILKIVQTH 62
Query: 145 DEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
+ ++Q E + L + ++ VV G G + + N ++ +G+ +W+D
Sbjct: 63 GWEKFRQIEKKTLLKTKNIKNTVVATGGGIIMDTENREFIKANGVCIWLD 112
>gi|399925231|ref|ZP_10782589.1| shikimate kinase [Peptoniphilus rhinitidis 1-13]
Length = 503
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 78/144 (54%), Gaps = 6/144 (4%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L+GM ++ KT +GK L+ L +FD+D+L+ E S ++ F EK ++ ET
Sbjct: 341 NIILIGMPSSGKTTMGKLLSKKLNREFFDTDNLI-EEEENLSVSEIFENKGEKYFRDLET 399
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANL-ALLRHGISLWIDVPPGMVARMDHSGFPESEVL 213
++L+++S +V+ G G N +L++ I ++++ + +++ G P S+ L
Sbjct: 400 KILEEVSKKNGIVIATGGGTPIKEVNRDMILQNSIVIYLNRN---IEKLETFGRPLSKNL 456
Query: 214 PQLFALYKEMRDGYA-TADVTVSL 236
L +Y + Y+ +D+ +++
Sbjct: 457 KTLEKMYDKRNPIYSDLSDIKINV 480
>gi|162147968|ref|YP_001602429.1| bifunctional protein: shikimate kinase and 3-dehydroquinate
synthase [Gluconacetobacter diazotrophicus PAl 5]
gi|209542585|ref|YP_002274814.1| 3-dehydroquinate synthase [Gluconacetobacter diazotrophicus PAl 5]
gi|161786545|emb|CAP56127.1| putative bifunctional protein: shikimate kinase and
3-dehydroquinate synthase [Gluconacetobacter
diazotrophicus PAl 5]
gi|209530262|gb|ACI50199.1| 3-dehydroquinate synthase [Gluconacetobacter diazotrophicus PAl 5]
Length = 591
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 90/196 (45%), Gaps = 15/196 (7%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
SV LVG+ A KT +G+ +A L + D+D + E A G S A FR E +++ E
Sbjct: 53 SVVLVGLMGAGKTTIGRRIAARLGMPFVDAD-VEIERAAGCSIADLFRRYGEAEFRKGEH 111
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVP-PGMVARMD---HSGFPE 209
V++++ S LV+ G GA A++R S+W+ P P +V R+ H
Sbjct: 112 RVIRRILSGHPLVLATGGGAFMDPVTRAVIRDRATSVWLRCPLPVLVRRVQGRTHRPLLN 171
Query: 210 SEVLPQLFALYKEMRDG-YATADVTVSL-QKVASQLGYDDLDAVTTED------MTLEVK 261
+ A E+R YA A++TV ++ Q + A+T + LE +
Sbjct: 172 EGNPRDILAALMEIRHPVYAEANITVDCGEESVDQSAATVISALTLAKPPRLVPVILE-R 230
Query: 262 WLYNASISDPTSRLLG 277
W Y+ +I + R G
Sbjct: 231 WRYDVTIGEDLLRHAG 246
>gi|237809357|ref|YP_002893797.1| shikimate kinase [Tolumonas auensis DSM 9187]
gi|259585304|sp|C4LB08.1|AROK_TOLAT RecName: Full=Shikimate kinase; Short=SK
gi|237501618|gb|ACQ94211.1| Shikimate kinase [Tolumonas auensis DSM 9187]
Length = 172
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 82/163 (50%), Gaps = 16/163 (9%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FL+G A K+ +GK+L++ L +DSD + E G A F E+G+++ E
Sbjct: 6 NIFLIGPMGAGKSTIGKYLSETLHMDLYDSDQEI-ERRTGADIAWVFDVEGEEGFRKREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVP-PGMVARMD--------H 204
+V+ LS + +V+ G GA++S L GI ++++ P +AR
Sbjct: 65 QVISDLSELQGIVLATGGGAIKSPLTRNRLSARGIVVYLETPIEKQLARTQRDKRRPLLR 124
Query: 205 SGFPESEVLPQLF----ALYKEMRDGYATADVTVSLQKVASQL 243
+ P EVL +L LY+E+ D Y ++ ++VA+Q+
Sbjct: 125 TEEPPREVLTRLADEREPLYREIAD-YVVRTDELTAKQVATQI 166
>gi|309782883|ref|ZP_07677603.1| shikimate kinase [Ralstonia sp. 5_7_47FAA]
gi|308918307|gb|EFP63984.1| shikimate kinase [Ralstonia sp. 5_7_47FAA]
Length = 192
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
L ++VF VG+ A KT +G+ +A L +FDSD + EA G F E G++
Sbjct: 3 LSVSNVFFVGLMGAGKTTVGRAVARRLDLPFFDSDHEI-EARCGVRVPVIFEHEGEVGFR 61
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPP 196
ET ++ +L++ +V+ G GAV + N A LR G +++ P
Sbjct: 62 DRETHMIDELTARDGVVIATGGGAVLRAENRAFLRERGTVIYLRANP 108
>gi|326796945|ref|YP_004314765.1| shikimate kinase [Marinomonas mediterranea MMB-1]
gi|326547709|gb|ADZ92929.1| Shikimate kinase [Marinomonas mediterranea MMB-1]
Length = 182
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ LVG A KT +G+ L+ L +FDSD ++ E AG + F + E G+++ ET
Sbjct: 6 NIVLVGPMGAGKTTIGRLLSQTLEREFFDSDRVIEEKAGAD-IPWIFDKEGEDGFRRRET 64
Query: 155 EVLKQL--SSMGRLVVCAGNGAVQSSANLALLR 185
VL+++ R+V+ G G V N ALLR
Sbjct: 65 HVLQEMLEEPEQRVVLATGGGIVMREENRALLR 97
>gi|389873926|ref|YP_006381345.1| shikimate kinase [Advenella kashmirensis WT001]
gi|388539175|gb|AFK64363.1| shikimate kinase [Advenella kashmirensis WT001]
Length = 191
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 55/98 (56%), Gaps = 2/98 (2%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+FL+GM A KT +G+ LA +L + D D EA G S F E G+++ ET+
Sbjct: 19 IFLIGMMGAGKTTIGRGLARSLGREFLDLDH-ELEARCGVSIPTIFDIEGEAGFRRRETQ 77
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWI 192
VL++++ +V+ G GAV + N LLR GI L++
Sbjct: 78 VLQEITLRRDVVLATGGGAVVAPENQELLRARGIVLYL 115
>gi|330993348|ref|ZP_08317283.1| 3-dehydroquinate synthase [Gluconacetobacter sp. SXCC-1]
gi|329759378|gb|EGG75887.1| 3-dehydroquinate synthase [Gluconacetobacter sp. SXCC-1]
Length = 580
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 73/148 (49%), Gaps = 7/148 (4%)
Query: 93 GTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQA 152
G ++ LVG+ A KT +G+ LA L + DSD + E A G S A F++ E +++
Sbjct: 40 GRTIVLVGLMGAGKTTIGRILATTLGLPFVDSDEEI-ERAAGCSIADLFQKYGEPEFRRG 98
Query: 153 ETEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVP-PGMVARM---DHSGF 207
E V+++L S +V+ G GA A +R +S+W+ P P +V R+ H
Sbjct: 99 ERLVIRRLLSGPPVVLATGGGAFMDQRTRASVREQAVSIWLRCPLPLLVQRVAERTHRPL 158
Query: 208 PESEVLPQLFALYKEMRDG-YATADVTV 234
+ + A + +R YA AD+ V
Sbjct: 159 LNTASPHAVLADFMRIRHPVYAEADIIV 186
>gi|452751532|ref|ZP_21951277.1| Shikimate kinase I [alpha proteobacterium JLT2015]
gi|451960751|gb|EMD83162.1| Shikimate kinase I [alpha proteobacterium JLT2015]
Length = 189
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 2/119 (1%)
Query: 76 PSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGE 135
P+ A K K + + LVG+ A K+ +G+ LA L + D+D + EAA G
Sbjct: 2 PAMATKPKIPKPPAPPRNAPIMLVGLMGAGKSTIGRRLARRLSLPFVDADEEI-EAAAGL 60
Query: 136 SAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGA-VQSSANLALLRHGISLWID 193
S ++ F E ++ E V+ +L R V+ G GA V A+L GI++W+D
Sbjct: 61 SVSEIFARFGEAHFRDGERRVIARLMEGRRQVIATGGGAFVDDETRAAMLASGITIWVD 119
>gi|134096275|ref|YP_001101350.1| bifunctional 3-dehydroquinate synthase/shikimate kinase
[Herminiimonas arsenicoxydans]
gi|133740178|emb|CAL63229.1| bifunctional protein [Includes: 3-dehydroquinate synthase ;
shikimate kinase] [Herminiimonas arsenicoxydans]
Length = 554
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Query: 93 GTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQA 152
G ++FLVG+ A KT +G+ LA L + DSD + EA G + F E ++Q
Sbjct: 2 GGNIFLVGLMGAGKTTVGRALAKRLNKQFIDSDHEI-EARTGAAIPLIFEIEGEASFRQR 60
Query: 153 ETEVLKQLSSMGRLVVCAGNGAVQSSANLALLR 185
E EV++ L++ +V+ G GAV ++ N A L+
Sbjct: 61 EAEVIRDLTAQQDIVLATGGGAVLNAENRAYLK 93
>gi|92112746|ref|YP_572674.1| shikimate kinase [Chromohalobacter salexigens DSM 3043]
gi|123387601|sp|Q1QZY3.1|AROK_CHRSD RecName: Full=Shikimate kinase; Short=SK
gi|91795836|gb|ABE57975.1| shikimate kinase [Chromohalobacter salexigens DSM 3043]
Length = 180
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 75/154 (48%), Gaps = 22/154 (14%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ LVG A K+ +G+ LA L+ +FDSD + EA G + A F E G++ ET
Sbjct: 6 TIILVGPMGAGKSTIGRLLAAELQREFFDSDHEI-EARCGANIAWIFDVEGEAGFRDRET 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMVAR---------MDH 204
+L++L+S+ +V+ G GAV N LR G +++ R +
Sbjct: 65 AMLRELASLDAVVLATGGGAVMREDNRQALRERGTVVYLATSVEQQIRRTARDRNRPLLR 124
Query: 205 SGFPESEVLPQLFA----LYKEMRDGYATADVTV 234
G PE +VL LFA LY+ ATAD+ V
Sbjct: 125 QGNPE-QVLRDLFAKRDPLYR------ATADLVV 151
>gi|389704106|ref|ZP_10185820.1| shikimate kinase [Acinetobacter sp. HA]
gi|388611189|gb|EIM40295.1| shikimate kinase [Acinetobacter sp. HA]
Length = 178
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 57/102 (55%), Gaps = 2/102 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+++LVG A KT +G+ LA+ L + DSD + E G + F + E+G++ ET
Sbjct: 11 NIYLVGPMGAGKTTVGRHLAELLGREFLDSDHEI-ERKTGATIPWIFEKEGEQGFRSRET 69
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVP 195
V+ +L+S +LV+ G GAV + N L+ GI +++ P
Sbjct: 70 VVIDELTSRPQLVLATGGGAVTQAPNREYLKQRGIVVYLYTP 111
>gi|320355059|ref|YP_004196398.1| shikimate kinase [Desulfobulbus propionicus DSM 2032]
gi|320123561|gb|ADW19107.1| Shikimate kinase [Desulfobulbus propionicus DSM 2032]
Length = 193
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 2/101 (1%)
Query: 94 TSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAE 153
++ L G KT +GK LA L Y + D+D L+ E A R ++QAE
Sbjct: 2 NNIVLTGFRATGKTSVGKALATKLGYAFSDTDRLLCERLHAPIADIVARHG-WPFFRQAE 60
Query: 154 TEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
++L++L+SM V+ G GA+Q A +LLR H +W+D
Sbjct: 61 AQLLRELASMTHTVLATGGGAIQHHAEWSLLRTHSYVVWLD 101
>gi|415946696|ref|ZP_11556486.1| Bifunctional shikimate kinase/3-dehydroquinate synthase
[Herbaspirillum frisingense GSF30]
gi|407758190|gb|EKF68054.1| Bifunctional shikimate kinase/3-dehydroquinate synthase
[Herbaspirillum frisingense GSF30]
Length = 602
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
S+FLVG+ A KT +G+ LA L + DSD + EA G + F E+ +++ E
Sbjct: 4 SIFLVGLMGAGKTTIGRALAKKLNKRFVDSDHEI-EARTGATIPVIFEIEGEESFRRREA 62
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRHG 187
EV+++LS+ +V+ G GAV + N L+ G
Sbjct: 63 EVIRELSAQPDIVLATGGGAVLRAENRENLKKG 95
>gi|340785653|ref|YP_004751118.1| bifunctional 3-dehydroquinate synthase/shikimate kinase [Collimonas
fungivorans Ter331]
gi|340550920|gb|AEK60295.1| bifunctional 3-dehydroquinate synthase/shikimate kinase [Collimonas
fungivorans Ter331]
Length = 607
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG+ A KT +G+ LA L + DSD + EA G S F E+ ++Q ET
Sbjct: 36 NIFLVGLMGAGKTTVGRALAKKLNKLFIDSDHEI-EARTGVSIPLIFEIEGEESFRQRET 94
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR 185
EV++ LS +V+ G GAV N L+
Sbjct: 95 EVIRDLSGRRGIVLATGGGAVMRPENREYLK 125
>gi|406914815|gb|EKD53960.1| shikimate kinase I [uncultured bacterium]
Length = 176
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 58/104 (55%), Gaps = 2/104 (1%)
Query: 92 KGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQ 151
K T++FL+G A K+ +GK+LA L ++D+D + E G F E G+++
Sbjct: 5 KQTNIFLIGPMGAGKSSVGKYLATQLNMEFYDTDEEI-EKRTGVDIGWIFDLEGEMGFRK 63
Query: 152 AETEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDV 194
E ++ +L+ + +++ G G + S ALLR HG+ ++++V
Sbjct: 64 REETIVAELAGLSNIILATGGGTILSPECRALLRTHGVIVYLEV 107
>gi|399543740|ref|YP_006557048.1| shikimate kinase [Marinobacter sp. BSs20148]
gi|399159072|gb|AFP29635.1| Shikimate kinase [Marinobacter sp. BSs20148]
Length = 188
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
V LVG A K+ +G+ LA L Y + D+D ++ E G + F E G++Q ET
Sbjct: 7 VILVGPMGAGKSTIGRMLARELDYRFLDTDRIIEERCGA-NIPWIFDVEGEDGFRQRETA 65
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLR 185
+L +LS+ +++ G GAV N LLR
Sbjct: 66 MLSELSTEAGIILATGGGAVVRDVNHELLR 95
>gi|421874664|ref|ZP_16306266.1| shikimate kinase family protein [Brevibacillus laterosporus GI-9]
gi|372456339|emb|CCF15815.1| shikimate kinase family protein [Brevibacillus laterosporus GI-9]
Length = 165
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
++ T++ L+G K+ +G+ LA L Y D D + +A G ++ + F E E+ ++
Sbjct: 1 MQSTNIILIGFMGTGKSTVGEQLAQRLHYERCDLDEEIVKATG-KTILQIFAEDGEEIFR 59
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANL-ALLRHG 187
Q ET VL+QL R V+ G GAV N+ +L+HG
Sbjct: 60 QLETNVLRQLVDGNRRVIITGGGAVLRPENVQVMLQHG 97
>gi|284800124|ref|ZP_05985763.2| shikimate kinase [Neisseria subflava NJ9703]
gi|284795809|gb|EFC51156.1| shikimate kinase [Neisseria subflava NJ9703]
Length = 202
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L+G+ A KT LGK LA ++DSD + + G S F E+G++ ET
Sbjct: 39 NLILIGLMGAGKTTLGKQLAQMFECPFYDSDYEIC-TSSGVSIPTIFEMEGEEGFRNRET 97
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPP 196
+LK+L+S +V+ G G+V S N +LR +G +++ P
Sbjct: 98 NMLKKLASRRNIVLSTGGGSVLRSENRQILRQNGTVVYLHASP 140
>gi|146277569|ref|YP_001167728.1| shikimate kinase [Rhodobacter sphaeroides ATCC 17025]
gi|145555810|gb|ABP70423.1| shikimate kinase [Rhodobacter sphaeroides ATCC 17025]
Length = 180
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+V +VGM A KT +G LA AL + DSD + E A + A+ F E +++ E+
Sbjct: 7 TVVMVGMMGAGKTAVGTALARALAVPFLDSDEEI-ERAANRTIAEIFARDGEPFFREKES 65
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWI 192
+VL +L V+ G GA + AN ++R G+S+W+
Sbjct: 66 QVLTRLLKGTPCVLSTGGGAFMAEANRRMIREQGVSVWL 104
>gi|294669684|ref|ZP_06734751.1| hypothetical protein NEIELOOT_01585 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291308597|gb|EFE49840.1| hypothetical protein NEIELOOT_01585 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 172
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 2/106 (1%)
Query: 92 KGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQ 151
K ++F VG+ A KT LG+ LA L ++DSD ++ E G S F E+G++
Sbjct: 4 KTHNIFFVGLMGAGKTTLGRQLAKQLERPFYDSDQIICERT-GVSIPTIFEMEGEEGFRL 62
Query: 152 AETEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPP 196
E V+ +++++ +V+ G GAV N LR G +++ P
Sbjct: 63 REAAVIDEMTALSGIVLATGGGAVTREENRRCLRGRGTVVYLHAKP 108
>gi|300313470|ref|YP_003777562.1| bifunctional 3-dehydroquinate synthase/shikimate kinase
[Herbaspirillum seropedicae SmR1]
gi|300076255|gb|ADJ65654.1| bifunctional enzyme: 3-dehydroquinate synthase/shikimate kinase
[Herbaspirillum seropedicae SmR1]
Length = 596
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
S+FLVG+ A KT +G+ LA L + DSD + EA G + F E+ +++ E
Sbjct: 4 SIFLVGLMGAGKTTIGRALAKKLNKRFIDSDHEI-EARTGATIPVIFEIEGEENFRRREA 62
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRHG 187
EV+++L+++ +V+ G GA+ + N L+ G
Sbjct: 63 EVIRELTALPDIVLATGGGAILRAENRDNLKKG 95
>gi|114330403|ref|YP_746625.1| shikimate kinase [Nitrosomonas eutropha C91]
gi|114307417|gb|ABI58660.1| shikimate kinase [Nitrosomonas eutropha C91]
Length = 215
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 58/117 (49%), Gaps = 2/117 (1%)
Query: 90 ELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGY 149
EL ++ L+GM A KT +GK LA+ + + D D + + G F E G+
Sbjct: 25 ELIPGNIILIGMMGAGKTTVGKLLANLVGKTFIDVDHEIQQRTG-VGIPVIFEIEGEAGF 83
Query: 150 QQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMVARMDHS 205
++ E+EVL+++ +V+ G GA+ N LLR HG +++ P + R H
Sbjct: 84 RKRESEVLREVVQQQNIVLATGGGAILYPDNRTLLRQHGTVIYLCAPVSELRRRTHQ 140
>gi|304316743|ref|YP_003851888.1| shikimate kinase [Thermoanaerobacterium thermosaccharolyticum DSM
571]
gi|302778245|gb|ADL68804.1| Shikimate kinase [Thermoanaerobacterium thermosaccharolyticum DSM
571]
Length = 171
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 76/159 (47%), Gaps = 11/159 (6%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L G K+ +GK +AD L + Y D+D L+ E G + F + EK ++ E
Sbjct: 3 NIALTGFMATGKSVVGKKVADILSFGYIDTDCLI-EKICGMKIPEIFDKYGEKYFRGIEK 61
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMVARM--DHSGFP--- 208
+K+ S + V+ G G V + +N+ LR HG+ + + P ++ R D P
Sbjct: 62 VAVKRASRLKNHVISTGGGVVLNPSNIVQLRKHGVVICLKARPEIILRNVGDAGSRPILM 121
Query: 209 ESEVLPQLFALYKEMRDGYATADVTVSLQKVASQLGYDD 247
+V ++ L E + Y AD T+ + S++G DD
Sbjct: 122 SDDVYERIKTLLDERQHFYEFADYTIDI----SEMGIDD 156
>gi|62390505|ref|YP_225907.1| shikimate kinase [Corynebacterium glutamicum ATCC 13032]
gi|41325842|emb|CAF21631.1| SHIKIMATE KINASE I [Corynebacterium glutamicum ATCC 13032]
Length = 185
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 59/112 (52%), Gaps = 4/112 (3%)
Query: 85 ADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRES 144
+D ++E V LVG+ A K+ +G+ LA AL DSD L+ E A G++ F E
Sbjct: 11 SDDTSECSCPIVVLVGLPGAGKSTIGRRLARALNTELVDSDELI-ERATGKACGAVFSEL 69
Query: 145 DEKGYQQAET-EVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVP 195
E +++ E V + L S G VV G G+V + + LL+ +WIDVP
Sbjct: 70 GEPAFRELEAIHVAEALKSSG--VVSLGGGSVLTESTRELLKGQDVVWIDVP 119
>gi|225077282|ref|ZP_03720481.1| hypothetical protein NEIFLAOT_02341 [Neisseria flavescens
NRL30031/H210]
gi|224951426|gb|EEG32635.1| hypothetical protein NEIFLAOT_02341 [Neisseria flavescens
NRL30031/H210]
Length = 173
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 57/103 (55%), Gaps = 2/103 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L+G+ A KT LGK LA ++DSD + ++G S F E+G++ ET
Sbjct: 10 NLILIGLMGAGKTTLGKQLAQMFECPFYDSDYEICTSSG-VSIPTIFEMEGEEGFRNRET 68
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPP 196
+LK+L+S +V+ G G+V S N +LR +G +++ P
Sbjct: 69 NMLKKLASRRNIVLSTGGGSVLRSENRQILRQNGTVVYLHASP 111
>gi|319639387|ref|ZP_07994137.1| shikimate kinase [Neisseria mucosa C102]
gi|317399282|gb|EFV79953.1| shikimate kinase [Neisseria mucosa C102]
Length = 173
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 57/103 (55%), Gaps = 2/103 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L+G+ A KT LGK LA ++DSD + ++G S F E+G++ ET
Sbjct: 10 NLILIGLMGAGKTTLGKQLAQMFECPFYDSDYEICTSSG-VSIPTIFEMEGEEGFRNRET 68
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPP 196
+LK+L+S +V+ G G+V S N +LR +G +++ P
Sbjct: 69 NMLKKLASRRNIVLSTGGGSVLRSENRQILRQNGTVVYLHASP 111
>gi|440784955|ref|ZP_20961992.1| shikimate kinase [Clostridium pasteurianum DSM 525]
gi|440218605|gb|ELP57824.1| shikimate kinase [Clostridium pasteurianum DSM 525]
Length = 170
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 72/131 (54%), Gaps = 5/131 (3%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ +GM + KT + K ++ +D+D + E G+ + F+ +E +++ ET
Sbjct: 6 NIVFIGMPGSGKTTIAKNISKRYGLQLYDTDEYI-EKKEGKIISDIFKNGEE-YFRKLET 63
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALL-RHGISLWIDVPPGMVAR-MDHSGFP-ESE 211
E +K++SS +V+ G G ++SS N+ LL R+GI ++I+ P + + +D S P S+
Sbjct: 64 EAIKEISSKEAVVISTGGGVIKSSYNMKLLKRNGIIVFINRPLEYIIKDVDISNRPLLSQ 123
Query: 212 VLPQLFALYKE 222
L LYKE
Sbjct: 124 SRDNLHKLYKE 134
>gi|325983382|ref|YP_004295784.1| shikimate kinase [Nitrosomonas sp. AL212]
gi|325532901|gb|ADZ27622.1| Shikimate kinase [Nitrosomonas sp. AL212]
Length = 559
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 54/101 (53%), Gaps = 1/101 (0%)
Query: 87 ISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDE 146
I +L T++ LVGM A KT +GK L+++L + DSD + + G F E
Sbjct: 5 IQKKLGDTNIILVGMMGAGKTTIGKALSNSLCKAFVDSDHEI-QRRTGVKIPVIFEIEGE 63
Query: 147 KGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHG 187
G+++ E+EVL + +++ G GAV ++ N LLR G
Sbjct: 64 AGFRKRESEVLAGMVEKKNIILATGGGAVLNAENRQLLRQG 104
>gi|419797339|ref|ZP_14322828.1| shikimate kinase [Neisseria sicca VK64]
gi|385698342|gb|EIG28710.1| shikimate kinase [Neisseria sicca VK64]
Length = 170
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 75/138 (54%), Gaps = 4/138 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L+G+ A KT LG+++A L ++DSD + A+G S F E+G++ ET
Sbjct: 7 NLILIGLMGAGKTTLGRYIAQMLDRPFYDSDHEICTASG-VSIPIIFEMEGEQGFRNRET 65
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLA-LLRHGISLWIDVPPGMVARMDHSGFPESEVL 213
+LK+L++M +++ G G+V N + R+G+ +++ P ++ ++ + + S L
Sbjct: 66 AMLKKLTAMKDIILSTGGGSVLREENRQNMRRNGMVVYLHASPEVL--LERTRYDNSRPL 123
Query: 214 PQLFALYKEMRDGYATAD 231
Q+ ++++ Y D
Sbjct: 124 LQVENPLAKLQELYNARD 141
>gi|381152532|ref|ZP_09864401.1| shikimate kinase [Methylomicrobium album BG8]
gi|380884504|gb|EIC30381.1| shikimate kinase [Methylomicrobium album BG8]
Length = 176
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 60/110 (54%), Gaps = 2/110 (1%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
++ +++L+G+ A KT +G+ LA L+ ++DSD + E A G + F E G++
Sbjct: 1 MRSENIYLIGLMGAGKTTIGRQLAKTLKLPFYDSDKAI-EEATGVNIPTIFEFEGEAGFR 59
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMV 199
E ++++ L+ M +V+ G GA+ N LL+ +G +++ G +
Sbjct: 60 DREQKMIRHLTQMHGIVLATGGGAILREENRHLLKENGFVVYLKCSVGRI 109
>gi|145295744|ref|YP_001138565.1| shikimate kinase [Corynebacterium glutamicum R]
gi|417970635|ref|ZP_12611566.1| shikimate kinase [Corynebacterium glutamicum S9114]
gi|418245804|ref|ZP_12872205.1| shikimate kinase [Corynebacterium glutamicum ATCC 14067]
gi|140845664|dbj|BAF54663.1| hypothetical protein [Corynebacterium glutamicum R]
gi|344044931|gb|EGV40605.1| shikimate kinase [Corynebacterium glutamicum S9114]
gi|354510088|gb|EHE83016.1| shikimate kinase [Corynebacterium glutamicum ATCC 14067]
Length = 190
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 59/112 (52%), Gaps = 4/112 (3%)
Query: 85 ADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRES 144
+D ++E V LVG+ A K+ +G+ LA AL DSD L+ E A G++ F E
Sbjct: 16 SDDTSECSCPIVVLVGLPGAGKSTIGRRLARALNTELVDSDELI-ERATGKACGAVFSEL 74
Query: 145 DEKGYQQAET-EVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVP 195
E +++ E V + L S G VV G G+V + + LL+ +WIDVP
Sbjct: 75 GEPAFRELEAIHVAEALKSSG--VVSLGGGSVLTESTRELLKGHDVVWIDVP 124
>gi|269120975|ref|YP_003309152.1| shikimate kinase [Sebaldella termitidis ATCC 33386]
gi|268614853|gb|ACZ09221.1| Shikimate kinase [Sebaldella termitidis ATCC 33386]
Length = 165
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 68/138 (49%), Gaps = 5/138 (3%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L+GM + KT + + LA+ L +D+D + E G F E E ++ E
Sbjct: 3 NIVLIGMPASGKTTISELLAEKLEMEKYDAD-IYLEEMEGRLIKDIFSEFGEDYFRDLEE 61
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLA-LLRHGISLWIDVPPGMVARMDHSGFPESEVL 213
+ +LS +++ G G ++ N+ L ++GI +++D P +A+ DH+ P +
Sbjct: 62 KYTNELSEKNNIIISTGGGVIKREKNIENLKKNGIVIFLDRDPSEIAKEDHALRPLLQDT 121
Query: 214 PQLFALYKE---MRDGYA 228
+ LY E + +GYA
Sbjct: 122 ANIERLYGERYHLYEGYA 139
>gi|189485286|ref|YP_001956227.1| shikimate kinase [uncultured Termite group 1 bacterium phylotype
Rs-D17]
gi|170287245|dbj|BAG13766.1| shikimate kinase [uncultured Termite group 1 bacterium phylotype
Rs-D17]
Length = 171
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 106 KTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEVLKQLSSMGR 165
K++ GK +++ L+ +FD+D LV E G S + F++ E +++ E E +K++S
Sbjct: 13 KSNTGKIISEKLKMSFFDTDDLV-EKKSGFSISDIFKKFGEANFRKMEAETIKEVSEKDS 71
Query: 166 LVVCAGNGAVQSSANLALLRH 186
+V+ G GAV + AN+A LR
Sbjct: 72 VVISCGGGAVLNPANIANLRK 92
>gi|344940815|ref|ZP_08780103.1| Shikimate kinase [Methylobacter tundripaludum SV96]
gi|344262007|gb|EGW22278.1| Shikimate kinase [Methylobacter tundripaludum SV96]
Length = 174
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Query: 92 KGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQ 151
+ +++LVG+ A KT +G+ LA AL+ ++DSD + E G + F E+G++
Sbjct: 3 RSENIYLVGLMGAGKTTIGRQLARALKLPFYDSDKAIEERTGVDIPT-IFEFEGEEGFRD 61
Query: 152 AETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRH 186
E ++++QL+ M +V+ G GA+ N LL+
Sbjct: 62 REQKMIQQLTQMEGIVLATGGGAILREENRRLLKE 96
>gi|19552834|ref|NP_600836.1| shikimate kinase [Corynebacterium glutamicum ATCC 13032]
gi|21324391|dbj|BAB99015.1| Shikimate kinase [Corynebacterium glutamicum ATCC 13032]
gi|385143741|emb|CCH24780.1| shikimate kinase [Corynebacterium glutamicum K051]
Length = 190
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 59/112 (52%), Gaps = 4/112 (3%)
Query: 85 ADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRES 144
+D ++E V LVG+ A K+ +G+ LA AL DSD L+ E A G++ F E
Sbjct: 16 SDDTSECSCPIVVLVGLPGAGKSTIGRRLARALNTELVDSDELI-ERATGKACGAVFSEL 74
Query: 145 DEKGYQQAET-EVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVP 195
E +++ E V + L S G VV G G+V + + LL+ +WIDVP
Sbjct: 75 GEPAFRELEAIHVAEALKSSG--VVSLGGGSVLTESTRELLKGQDVVWIDVP 124
>gi|312897355|ref|ZP_07756781.1| shikimate kinase [Megasphaera micronuciformis F0359]
gi|310621573|gb|EFQ05107.1| shikimate kinase [Megasphaera micronuciformis F0359]
Length = 171
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 78/143 (54%), Gaps = 5/143 (3%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
++ ++ ++GM + KT G LA+AL ++D+D+ + E + G + + F S E ++
Sbjct: 1 MENHNIVIIGMPGSGKTTFGTALAEALGRDFYDADTYL-ETSEGRTIKELFAVS-EDCFR 58
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID-VPPGMVARMDHSGFP 208
AET + L S +V+ G G ++ N+ + + +GI +++D P +V +D S P
Sbjct: 59 DAETRTARALGSKKGVVIATGGGVIKRRENIDIYKENGIIIFLDRAPEDIVTDVDVSTRP 118
Query: 209 ESEVLP-QLFALYKEMRDGYATA 230
+ P ++F LY+E D Y ++
Sbjct: 119 LLKDGPSRVFDLYRERIDTYRSS 141
>gi|418406013|ref|ZP_12979333.1| shikimate kinase [Agrobacterium tumefaciens 5A]
gi|358007926|gb|EHK00249.1| shikimate kinase [Agrobacterium tumefaciens 5A]
Length = 193
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 81/161 (50%), Gaps = 9/161 (5%)
Query: 90 ELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGY 149
+L G +V VG+ A K+ +G+ +A L+ + D+D + E + A+ F E+ +
Sbjct: 19 KLAGRNVVFVGLMGAGKSAIGRMVAQQLKVSFIDTD-VEIERVSRMTIAELFATYGEEEF 77
Query: 150 QQAETEVLKQLSSMGRLVVCAGNGA-VQSSANLALLRHGISLW----IDVPPGMVARMDH 204
+ ET V+K+L G V+ G GA + + + R +SLW I+V V + DH
Sbjct: 78 RALETRVVKRLLRGGPKVISTGGGAFINDNTRRHITRGSVSLWLKADIEVLWERVNKRDH 137
Query: 205 SGFPESEVLPQ--LFALYKEMRDGYATADVTVSLQKVASQL 243
++E P+ L AL ++ YA AD+T+ + V ++
Sbjct: 138 RPLLKTEN-PKATLAALMEKRYPIYAEADLTIESRDVRKEI 177
>gi|323140596|ref|ZP_08075521.1| shikimate kinase [Phascolarctobacterium succinatutens YIT 12067]
gi|322414949|gb|EFY05743.1| shikimate kinase [Phascolarctobacterium succinatutens YIT 12067]
Length = 166
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L+GM K+ GK +A L+ ++D+D+++ E + KAF E ++ AET
Sbjct: 3 NIVLIGMPGCGKSTFGKRMAKRLQLPFYDADTVLEERE--QRTIKAFFAESEDAFRAAET 60
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALL-RHGISLWIDVPP 196
L L+ V+ G GAV+ + N+ LL R G+ ++ID P
Sbjct: 61 RTLAYLAECDGAVIATGGGAVKRAENMELLKRGGVVVFIDRKP 103
>gi|225850938|ref|YP_002731172.1| shikimate kinase [Persephonella marina EX-H1]
gi|254806779|sp|C0QR76.1|AROK_PERMH RecName: Full=Shikimate kinase; Short=SK
gi|225646155|gb|ACO04341.1| shikimate kinase [Persephonella marina EX-H1]
Length = 164
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 72/148 (48%), Gaps = 7/148 (4%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+++LVG + K+ +GK LA+ L + + D D + E G+ FRE E ++ E
Sbjct: 3 NIYLVGFMGSGKSTVGKLLAEKLGFRFVDIDQEI-EKEEGKKIKDIFREKGESYFRDLEK 61
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMVARMDHSGFPESEVL 213
++++ LVV G G S N+ ++ +G +W+D P V G E +L
Sbjct: 62 RMIERFLGSKNLVVSTGGGLGADSENMRKMKENGTVIWLDTPLETVFER-CKGDDERPLL 120
Query: 214 ----PQLFALYKEMRDGYATADVTVSLQ 237
++ L+++ + YA AD+ +S +
Sbjct: 121 KKNRKEIKELFEKRKKIYAQADIRISTE 148
>gi|227498947|ref|ZP_03929086.1| shikimate kinase/3-dehydroquinate synthase [Acidaminococcus sp.
D21]
gi|352683441|ref|YP_004895424.1| shikimate kinase [Acidaminococcus intestini RyC-MR95]
gi|226904398|gb|EEH90316.1| shikimate kinase/3-dehydroquinate synthase [Acidaminococcus sp.
D21]
gi|350278094|gb|AEQ21284.1| shikimate kinase/3-dehydroquinate synthase [Acidaminococcus
intestini RyC-MR95]
Length = 165
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 73/147 (49%), Gaps = 10/147 (6%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ +G+ K+ +G +A AL ++D+D +V E GE+ F E E ++ ET
Sbjct: 3 NLIFIGLPGCGKSTIGAMVAKALALPFYDAD-IVTERLAGETIPHMF-EKGEAYFRIRET 60
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWI---DVPPGMVARMDHSGFP--- 208
E ++QL R V+ G G V N+ALL+ +++ DV ++A +D S P
Sbjct: 61 EAIRQLCQKNRCVISCGGGVVTRKENMALLKKAGTIFFLDRDV-EAIIASVDTSTRPLLE 119
Query: 209 -ESEVLPQLFALYKEMRDGYATADVTV 234
++E + L + + +GYA + V
Sbjct: 120 EDAEKVRDLDQKRRPLYEGYADVKIPV 146
>gi|221195853|ref|ZP_03568906.1| shikimate kinase [Atopobium rimae ATCC 49626]
gi|221184327|gb|EEE16721.1| shikimate kinase [Atopobium rimae ATCC 49626]
Length = 182
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 9/153 (5%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+F VG A K+ L + L + Y D+D L E A G+S + E ++ ET+
Sbjct: 17 IFFVGFLGAGKSTLARNLGEMFHRRYVDTDRLA-EKAAGKSLGDIYATDGEIYFRNIETK 75
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDV----PPGMVARMDHSGFPES 210
VL+ L S L+V G G V+ + N+ L+ G+ +++D + R+D P+
Sbjct: 76 VLRDLRSKKSLLVSCGGGIVERAKNVELMHEMGVIVYLDGSLEDSLRQIQRVDRR--PDL 133
Query: 211 EVLPQLFALYKEMRDGY-ATADVTVSLQKVASQ 242
L LY+ R Y A AD+T+ +++ Q
Sbjct: 134 GTLDHARRLYEHRRPLYEAAADITIDIREKTFQ 166
>gi|84686926|ref|ZP_01014810.1| shikimate kinase [Maritimibacter alkaliphilus HTCC2654]
gi|84665123|gb|EAQ11603.1| shikimate kinase [Rhodobacterales bacterium HTCC2654]
Length = 181
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 55/98 (56%), Gaps = 2/98 (2%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
V +VGM A K+ +GK LA L + DSD+ + EAA + A+ F+ E ++ E E
Sbjct: 9 VTVVGMMGAGKSAVGKALATRLGVPFLDSDAEI-EAAANMTIAEVFQRDGEAFFRDREAE 67
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANL-ALLRHGISLWI 192
V+ +L S G +V+ G GA + N A+ G+SLW+
Sbjct: 68 VIARLLSTGPIVLSTGGGAFLAERNRDAISAAGVSLWL 105
>gi|255067347|ref|ZP_05319202.1| shikimate kinase [Neisseria sicca ATCC 29256]
gi|255048498|gb|EET43962.1| shikimate kinase [Neisseria sicca ATCC 29256]
Length = 173
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 59/103 (57%), Gaps = 2/103 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L+G+ A KT LG+++A L ++DSD + A+G S F E+G++ ET
Sbjct: 10 NLILIGLMGAGKTTLGRYIAQMLDRPFYDSDHEICTASG-VSIPIIFEMEGEQGFRNRET 68
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLA-LLRHGISLWIDVPP 196
+LK+L++M +++ G G+V N + R+G+ +++ P
Sbjct: 69 AMLKKLTAMKDIILSTGGGSVLREENRQNMRRNGMVVYLHASP 111
>gi|416963599|ref|ZP_11936491.1| shikimate kinase [Burkholderia sp. TJI49]
gi|325521796|gb|EGD00532.1| shikimate kinase [Burkholderia sp. TJI49]
Length = 184
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+VF VG+ A KT +G+ +A L +FDSD + EA G F E G++ ET
Sbjct: 9 NVFFVGLMGAGKTTVGRAVARRLDRTFFDSDHEI-EARTGARIPVIFELEGEAGFRDRET 67
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPP 196
+V+ L+ +V+ G GAV N L+ HGI +++ P
Sbjct: 68 QVIADLTQRESIVLATGGGAVLRPENRECLKQHGIVVYLRANP 110
>gi|424057801|ref|ZP_17795318.1| shikimate kinase [Acinetobacter nosocomialis Ab22222]
gi|407439831|gb|EKF46352.1| shikimate kinase [Acinetobacter nosocomialis Ab22222]
Length = 189
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 56/102 (54%), Gaps = 2/102 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+++LVG A KT +G+ LA+ L + DSD + E G + F + E G++ ET
Sbjct: 20 NIYLVGPMGAGKTTVGRHLAELLGREFLDSDHEI-ERKTGATIPWIFEKEGEVGFRTRET 78
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVP 195
VL +L+S LV+ G GA+ ++N L+ GI +++ P
Sbjct: 79 VVLNELTSRKALVLATGGGAITQASNREFLKQRGIVIYLYTP 120
>gi|289548323|ref|YP_003473311.1| shikimate kinase [Thermocrinis albus DSM 14484]
gi|289181940|gb|ADC89184.1| Shikimate kinase [Thermocrinis albus DSM 14484]
Length = 166
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 2/103 (1%)
Query: 94 TSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAE 153
VFLVG + K+ +G+ LA L + + D D + + + A F+E E ++ E
Sbjct: 4 NRVFLVGFMCSGKSTVGRELAHTLGWEFVDVDEEI-QRQENNTVAGIFQEKGEAYFRNLE 62
Query: 154 TEVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVP 195
+VL QLS RLV+ G G + + L+++ G+ +W+D+P
Sbjct: 63 LQVLTQLSQRNRLVISTGGGLGANPVAMELMKNKGLVVWLDIP 105
>gi|395211601|ref|ZP_10399407.1| shikimate kinase [Pontibacter sp. BAB1700]
gi|394457675|gb|EJF11796.1| shikimate kinase [Pontibacter sp. BAB1700]
Length = 171
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 56/102 (54%), Gaps = 3/102 (2%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+FL+GM A KT LG+ LA+ L Y + D D + E G S A+ F +G++Q E +
Sbjct: 6 IFLIGMMGAGKTTLGRQLAERLGYTFVDLDEYL-EQREGCSIAQLFAAGGHEGFRQKERQ 64
Query: 156 VLKQ-LSSMGRLVVCAGNGAVQSSANLALL-RHGISLWIDVP 195
++ + + VV G G N+A + +HG S+++DVP
Sbjct: 65 AMESVVQEFEQAVVATGGGTPCFFDNMAFINQHGTSIFLDVP 106
>gi|334131129|ref|ZP_08504895.1| LOW QUALITY PROTEIN: Putative bifunctional protein
[Methyloversatilis universalis FAM5]
gi|333443759|gb|EGK71720.1| LOW QUALITY PROTEIN: Putative bifunctional protein
[Methyloversatilis universalis FAM5]
Length = 175
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 2/103 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVGM A KT +G+ LA L + D D + EA G S F E G+++ E
Sbjct: 6 NIFLVGMMGAGKTTVGRQLARRLHKRFVDCDHEI-EARTGVSIPTIFEIEGEAGFRRREA 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVPP 196
++ L+ LV+ G GAV A+ A L+ G +++DVPP
Sbjct: 65 ATIEALAQESGLVLATGGGAVLDPASRAHLKSGGWVVYLDVPP 107
>gi|207744527|ref|YP_002260919.1| shikimate kinaseIprotein [Ralstonia solanacearum IPO1609]
gi|421895851|ref|ZP_16326250.1| shikimate kinaseIprotein [Ralstonia solanacearum MolK2]
gi|206587016|emb|CAQ17600.1| shikimate kinaseIprotein [Ralstonia solanacearum MolK2]
gi|206595933|emb|CAQ62860.1| shikimate kinaseIprotein [Ralstonia solanacearum IPO1609]
Length = 184
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 2/104 (1%)
Query: 94 TSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAE 153
++VF VG+ A KT +G+ +A L +FDSD + EA G F E G++ E
Sbjct: 4 SNVFFVGLMGAGKTTVGRAVARRLDLPFFDSDHEI-EARCGVRVPVIFEHEGEMGFRDRE 62
Query: 154 TEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPP 196
T V+ +L++ +V+ G G V + N A LR G +++ P
Sbjct: 63 THVIDELTARHGVVLATGGGVVLRAENRAFLRERGTVIYLRANP 106
>gi|154245578|ref|YP_001416536.1| shikimate kinase., 3-dehydroquinate synthase [Xanthobacter
autotrophicus Py2]
gi|154159663|gb|ABS66879.1| Shikimate kinase., 3-dehydroquinate synthase [Xanthobacter
autotrophicus Py2]
Length = 594
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 72/156 (46%), Gaps = 7/156 (4%)
Query: 85 ADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRES 144
AD+ L S+ LVGM A K+ +G+ LA L + D+D + E A S + F
Sbjct: 14 ADMVRRLGRRSIVLVGMPGAGKSSVGRRLAKRLGLPFVDADEEI-ERAACMSIPEIFARR 72
Query: 145 DEKGYQQAETEVLKQLSSMGRLVVCAGNGA-VQSSANLALLRHGISLWIDVPPGMV---- 199
E +++ E V+ +L G V+ G GA + S A+ R G+S+W+ +
Sbjct: 73 GEVEFREGEKRVVARLLQSGPSVLATGGGAFMNSETRDAVARQGVSVWLRADLHTLLRRV 132
Query: 200 -ARMDHSGFPESEVLPQLFALYKEMRDGYATADVTV 234
R D + + +L L ++ D YA ADV V
Sbjct: 133 KKRTDRPLLAQGDPAAKLATLLQQRGDTYALADVIV 168
>gi|329118842|ref|ZP_08247538.1| shikimate kinase [Neisseria bacilliformis ATCC BAA-1200]
gi|327465033|gb|EGF11322.1| shikimate kinase [Neisseria bacilliformis ATCC BAA-1200]
Length = 172
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 72/148 (48%), Gaps = 8/148 (5%)
Query: 94 TSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAE 153
+++FL+G+ A KT LG+ LA L ++DSD ++ E G S F E G++ E
Sbjct: 6 SNLFLIGLMGAGKTTLGRRLAAQLNRAFYDSDQVICERT-GVSVPTIFEMEGEAGFRARE 64
Query: 154 TEVLKQLSSMGRLVVCAGNGAVQSSAN-LALLRHGISLWIDVPPGMVARMDHS--GFPES 210
V+ +LS++ +V+ G GAV N L G +++ P ++ S P
Sbjct: 65 AAVINELSALSGIVLATGGGAVLREENRRCLAARGTVIYLHAAPEILLERTRSDKNRPLL 124
Query: 211 EV---LPQLFALYKEMRDGY-ATADVTV 234
+V L +L ALY Y A AD+ V
Sbjct: 125 QVADPLAKLRALYHARDPLYRAAADLVV 152
>gi|332716416|ref|YP_004443882.1| shikimate kinase [Agrobacterium sp. H13-3]
gi|325063101|gb|ADY66791.1| Shikimate kinase [Agrobacterium sp. H13-3]
Length = 193
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 81/161 (50%), Gaps = 9/161 (5%)
Query: 90 ELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGY 149
+L G +V VG+ A K+ +G+ +A L+ + D+D + E + A+ F E+ +
Sbjct: 19 KLAGRNVVFVGLMGAGKSAIGRMVAQQLKVSFIDTD-VEIERVSRMTIAELFATYGEEEF 77
Query: 150 QQAETEVLKQLSSMGRLVVCAGNGA-VQSSANLALLRHGISLW----IDVPPGMVARMDH 204
+ ET V+K+L G V+ G GA + + + R +SLW I+V V + DH
Sbjct: 78 RALETRVVKRLLRGGPKVISTGGGAFINDNTRRHITRGSVSLWLKADIEVLWERVNKRDH 137
Query: 205 SGFPESEVLPQ--LFALYKEMRDGYATADVTVSLQKVASQL 243
++E P+ L AL ++ YA AD+T+ + V ++
Sbjct: 138 RPLLKTEN-PKATLAALMEKRYPIYAEADLTIESRDVRKEI 177
>gi|288576125|ref|ZP_05978229.2| shikimate kinase [Neisseria mucosa ATCC 25996]
gi|288566286|gb|EFC87846.1| shikimate kinase [Neisseria mucosa ATCC 25996]
Length = 182
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 71/138 (51%), Gaps = 4/138 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L+G+ A KT LG+ A ++DSD L +A G S + F E+G++ ET
Sbjct: 11 NLILIGLMGAGKTTLGRQFAQIYDCPFYDSD-LEICSASGVSISTIFEMEGEEGFRHRET 69
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMVARMDHSGFPESEVL 213
+LK+LS++ +V+ G G+V N LR HG +++ P ++ ++ + + S L
Sbjct: 70 LMLKKLSALNGIVLSTGGGSVLREENRRFLREHGTVVYLHALPEVL--LERTRYDSSRPL 127
Query: 214 PQLFALYKEMRDGYATAD 231
+ K++R Y D
Sbjct: 128 LKTDDPLKKLRGLYTVRD 145
>gi|78486474|ref|YP_392399.1| shikimate kinase [Thiomicrospira crunogena XCL-2]
gi|116257514|sp|Q31DP8.1|AROK_THICR RecName: Full=Shikimate kinase; Short=SK
gi|78364760|gb|ABB42725.1| shikimate kinase [Thiomicrospira crunogena XCL-2]
Length = 174
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 76/163 (46%), Gaps = 17/163 (10%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
S+FLVG A K+ +G+FLAD L Y + DSD V E G + F E G++ E
Sbjct: 5 SIFLVGPMGAGKSTVGRFLADKLHYQFLDSDQ-VIEDKTGATIPMIFDIEGESGFRAREK 63
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVP-PGMVARMDH-------- 204
+ L+ +V+ G GA+ + N LR G +++ +V R H
Sbjct: 64 AAIDDLTQQSEIVLATGGGAILNPENRKNLRSRGFVVYLKSSVDSLVQRTRHDRNRPLLQ 123
Query: 205 SGFPESEVLPQLFA----LYKEMRDGYATADVTVSLQKVASQL 243
+ PE +VL +L LY+E+ D + VS+ +V Q+
Sbjct: 124 TENPE-QVLRKLIEERGPLYEEVADLVIQTE-QVSVHRVVKQI 164
>gi|77163787|ref|YP_342312.1| shikimate kinase [Nitrosococcus oceani ATCC 19707]
gi|254436246|ref|ZP_05049753.1| shikimate kinase [Nitrosococcus oceani AFC27]
gi|115312155|sp|Q3JEG4.1|AROK_NITOC RecName: Full=Shikimate kinase; Short=SK
gi|76882101|gb|ABA56782.1| shikimate kinase [Nitrosococcus oceani ATCC 19707]
gi|207089357|gb|EDZ66629.1| shikimate kinase [Nitrosococcus oceani AFC27]
Length = 190
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 59/108 (54%), Gaps = 2/108 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG + KT +G++LA ++DSD + E+ G S F E G++Q E
Sbjct: 5 NIFLVGPMGSGKTTIGRYLARITGKNFYDSDREI-ESRTGVSIPVIFEIEGESGFRQREC 63
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSAN-LALLRHGISLWIDVPPGMVAR 201
+++ +L + +V+ G GAV ++ N L + GI +++ PP + R
Sbjct: 64 KIIAELVQLNNIVLATGGGAVLAAENRRELSQRGIVVYLYAPPKQLYR 111
>gi|317121066|ref|YP_004101069.1| 3-dehydroquinate synthase [Thermaerobacter marianensis DSM 12885]
gi|315591046|gb|ADU50342.1| 3-dehydroquinate synthase [Thermaerobacter marianensis DSM 12885]
Length = 660
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+ LVG+ A KT +G+ LA L + + D D L+ + AG ++ A F E G++ E +
Sbjct: 3 IVLVGLMGAGKTTVGRALAARLGWAFLDLDDLIEQEAG-QTVADLFAREGEAGFRTREEQ 61
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLA-LLRHGISLWIDVPPGMVAR 201
L ++ R+V+ G GAV S+ N L W++ PP +AR
Sbjct: 62 ALATALTLERVVLATGGGAVLSARNRQRLAAEPWVFWLEAPPDELAR 108
>gi|400756587|ref|NP_953075.2| shikimate kinase [Geobacter sulfurreducens PCA]
gi|409912549|ref|YP_006891014.1| shikimate kinase [Geobacter sulfurreducens KN400]
gi|307634966|gb|ADI84860.2| shikimate kinase [Geobacter sulfurreducens KN400]
gi|399107898|gb|AAR35402.2| shikimate kinase [Geobacter sulfurreducens PCA]
Length = 181
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 93 GTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQA 152
G +V L G K+ +GK LA L Y + D D+L+ E AG S + F E+ +++
Sbjct: 13 GRNVVLTGFMGTGKSTVGKLLARRLGYRFSDLDALIVERAG-ISINEIFERYGEQRFREL 71
Query: 153 ETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRH 186
ETE ++ L + VV G GAV + N LLR
Sbjct: 72 ETEAIRSLGGVSGRVVATGGGAVIAPRNRVLLRE 105
>gi|343085204|ref|YP_004774499.1| shikimate kinase [Cyclobacterium marinum DSM 745]
gi|342353738|gb|AEL26268.1| Shikimate kinase [Cyclobacterium marinum DSM 745]
Length = 177
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 61/102 (59%), Gaps = 3/102 (2%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+ LVGM + K+ LG+ LA L + ++D D L+ EA ++ ++ F + E +++ ET
Sbjct: 6 IVLVGMPGSGKSTLGRSLAAKLNWPFYDLDDLI-EAKAEKAISEIFSSAGEGYFRKLETS 64
Query: 156 VLKQ-LSSMGRLVVCAGNGAVQSSANLALL-RHGISLWIDVP 195
VL++ L V+ G GA + N+AL+ + G+S+++DVP
Sbjct: 65 VLEEILDKKETFVLATGGGAPCYNENMALINKKGVSVYLDVP 106
>gi|297587322|ref|ZP_06945967.1| shikimate 5-dehydrogenase [Finegoldia magna ATCC 53516]
gi|297575303|gb|EFH94022.1| shikimate 5-dehydrogenase [Finegoldia magna ATCC 53516]
Length = 403
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 75/177 (42%), Gaps = 24/177 (13%)
Query: 55 TTRSIADDTTSNTVTKVAAEDPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLA 114
T++ I DD N V K+ ++ + A LVGM + K+ + K +A
Sbjct: 224 TSKKIDDDVVENIVQKIRTKNMNIA------------------LVGMPGSGKSTVAKIIA 265
Query: 115 DALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGA 174
D D ++ + G + F EK +++ E+EVL++ S LV+ G GA
Sbjct: 266 KNTDKELVDIDKIITQRYG--NINDIFAVQGEKYFRKIESEVLEEFSKEKNLVIATGGGA 323
Query: 175 VQSSANLALL-RHGISLWIDVPPGMVARMDHSGFPES---EVLPQLFALYKEMRDGY 227
V N L ++ + WID P ++R + + + E+ LY+ D Y
Sbjct: 324 VTVKKNFYYLHQNSVVYWIDRPNSKLSRKNRPIYKTNTMREIRQNRNYLYRRFSDKY 380
>gi|158320657|ref|YP_001513164.1| shikimate kinase [Alkaliphilus oremlandii OhILAs]
gi|229508587|sp|A8MFK5.1|AROK_ALKOO RecName: Full=Shikimate kinase; Short=SK
gi|158140856|gb|ABW19168.1| Shikimate kinase [Alkaliphilus oremlandii OhILAs]
Length = 169
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 2/106 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ LVG KT LGK LAD L Y + D D L E S ++ FR E ++Q E+
Sbjct: 4 NIVLVGFMAVGKTTLGKLLADQLDYNFIDLD-LFIEKKESMSISEIFRLKGEAYFRQKES 62
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVPPGMV 199
E L LS + + V+ G G V S N + L+ G ++++ P +
Sbjct: 63 EALDLLSDVEQSVIATGGGTVISEENRSKLKQIGRVIYLEAEPSWI 108
>gi|390571351|ref|ZP_10251598.1| shikimate kinase [Burkholderia terrae BS001]
gi|389936696|gb|EIM98577.1| shikimate kinase [Burkholderia terrae BS001]
Length = 183
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+VF VG+ A KT +G+ +A L +FDSD V EA G F E G++ E
Sbjct: 9 NVFFVGLMGAGKTTVGRAVARRLDRPFFDSDHEV-EARTGARIPVIFELEGEAGFRDREA 67
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPP 196
+V+ +L+ +V+ G GAV N LR HGI +++ P
Sbjct: 68 QVIAELTGRESIVLATGGGAVLRPENRDALRAHGIVVYLRANP 110
>gi|262280336|ref|ZP_06058120.1| shikimate-kinase [Acinetobacter calcoaceticus RUH2202]
gi|262258114|gb|EEY76848.1| shikimate-kinase [Acinetobacter calcoaceticus RUH2202]
Length = 189
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+++LVG A KT +G+ LA+ L + DSD + E G + F + E G++ ET
Sbjct: 20 NIYLVGPMGAGKTTVGRHLAELLGREFLDSDHEI-ERKTGATIPWIFEKEGEIGFRTRET 78
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVP 195
VL +L+S LV+ G GA+ + N L+ GI +++ P
Sbjct: 79 IVLNELTSRNALVLATGGGAITQAPNREFLKQRGIVVYLYTP 120
>gi|420246457|ref|ZP_14749899.1| shikimate kinase [Burkholderia sp. BT03]
gi|398074560|gb|EJL65701.1| shikimate kinase [Burkholderia sp. BT03]
Length = 183
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+VF VG+ A KT +G+ +A L +FDSD V EA G F E G++ E
Sbjct: 9 NVFFVGLMGAGKTTVGRAVARRLDRPFFDSDHEV-EARTGARIPVIFELEGEAGFRDREA 67
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPP 196
+V+ +L+ +V+ G GAV N LR HGI +++ P
Sbjct: 68 QVIAELTGRESIVLATGGGAVLRPENRDALRAHGIVVYLRANP 110
>gi|260550836|ref|ZP_05825043.1| shikimate-kinase [Acinetobacter sp. RUH2624]
gi|425740024|ref|ZP_18858204.1| shikimate kinase 1 [Acinetobacter baumannii WC-487]
gi|445434958|ref|ZP_21440213.1| shikimate kinase 1 [Acinetobacter baumannii OIFC021]
gi|260406146|gb|EEW99631.1| shikimate-kinase [Acinetobacter sp. RUH2624]
gi|425495672|gb|EKU61849.1| shikimate kinase 1 [Acinetobacter baumannii WC-487]
gi|444755930|gb|ELW80494.1| shikimate kinase 1 [Acinetobacter baumannii OIFC021]
Length = 189
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+++LVG A KT +G+ LA+ L + DSD + E G + F + E G++ ET
Sbjct: 20 NIYLVGPMGAGKTTVGRHLAELLGREFLDSDHEI-ERKTGATIPWIFEKEGEVGFRTRET 78
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVP 195
VL +L+S LV+ G GA+ + N L+ GI +++ P
Sbjct: 79 VVLNELTSRKALVLATGGGAITQAPNREFLKQRGIVIYLYTP 120
>gi|115350366|ref|YP_772205.1| shikimate kinase [Burkholderia ambifaria AMMD]
gi|115280354|gb|ABI85871.1| shikimate kinase [Burkholderia ambifaria AMMD]
Length = 184
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+VF VG+ A KT +G+ +A L +FDSD + EA G F E G++ E+
Sbjct: 9 NVFFVGLMGAGKTTVGRAVARRLDRTFFDSDHEI-EARTGARIPVIFEMEGEAGFRDRES 67
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPP 196
+V+ L+ +V+ G GAV + N L+ HGI +++ P
Sbjct: 68 QVIADLTQRENIVLATGGGAVLRAENRDCLKGHGIVIYLRANP 110
>gi|297621524|ref|YP_003709661.1| Shikimate kinase [Waddlia chondrophila WSU 86-1044]
gi|297376825|gb|ADI38655.1| Shikimate kinase [Waddlia chondrophila WSU 86-1044]
Length = 174
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 4/113 (3%)
Query: 94 TSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAE 153
+ + L+G KT LGK LAD L+ + D+D L+ +AA S + F E G++ E
Sbjct: 11 SKIVLIGYRGVGKTTLGKALADTLKRPFIDTDDLIVQAA-KRSIPEIFNHEGEPGFRLIE 69
Query: 154 TEVLKQLSSMGRLVVCAGNGAVQSSANL-ALLRHGISLWIDVPPG-MVARMDH 204
V+ ++ ++ C G GA+ S N+ +L +G LW+ G ++ R+ +
Sbjct: 70 KRVIASINIPNAVIACGG-GAILDSDNVRSLKNNGYLLWLTATSGTLLCRISN 121
>gi|74316225|ref|YP_313965.1| shikimate kinase [Thiobacillus denitrificans ATCC 25259]
gi|124053408|sp|Q3SM89.1|AROK_THIDA RecName: Full=Shikimate kinase; Short=SK
gi|74055720|gb|AAZ96160.1| shikimate kinase I [Thiobacillus denitrificans ATCC 25259]
Length = 183
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 90/180 (50%), Gaps = 24/180 (13%)
Query: 92 KGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQ 151
K +++LVG+ A KT +G+ LA ++DSD + EA G F E G+++
Sbjct: 3 KRDNLYLVGLMGAGKTTVGRLLAKHYGCTFYDSDHEI-EARTGVKIPVIFEIEGEAGFRR 61
Query: 152 AETEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMVA---RMD---- 203
E V+ +L+++ +V+ G GAV S AN LR +G+ +++ P + R D
Sbjct: 62 REEAVIAELTTLSGIVLATGGGAVLSPANREHLRTNGLVIYLRGSPEQLCERTRNDRNRP 121
Query: 204 --HSGFPES---EVLPQLFALYKEMRDGYATADVTV--SLQKVA--SQLGYDDLDAVTTE 254
+G P + E+ Q +Y+E+ ADVTV + Q VA +++ Y LD + E
Sbjct: 122 LLQTGNPLAKLRELYQQRDPIYREL------ADVTVDTARQSVAGMTRVLYGKLDLLKGE 175
>gi|81702041|sp|Q74BL5.1|AROK_GEOSL RecName: Full=Shikimate kinase; Short=SK
Length = 175
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 93 GTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQA 152
G +V L G K+ +GK LA L Y + D D+L+ E AG S + F E+ +++
Sbjct: 7 GRNVVLTGFMGTGKSTVGKLLARRLGYRFSDLDALIVERAG-ISINEIFERYGEQRFREL 65
Query: 153 ETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRH 186
ETE ++ L + VV G GAV + N LLR
Sbjct: 66 ETEAIRSLGGVSGRVVATGGGAVIAPRNRVLLRE 99
>gi|379715439|ref|YP_005303776.1| shikimate kinase [Corynebacterium pseudotuberculosis 316]
gi|387138740|ref|YP_005694719.1| shikimate kinase [Corynebacterium pseudotuberculosis CIP 52.97]
gi|387140736|ref|YP_005696714.1| shikimate kinase [Corynebacterium pseudotuberculosis 1/06-A]
gi|389850493|ref|YP_006352728.1| shikimate kinase [Corynebacterium pseudotuberculosis 258]
gi|392400677|ref|YP_006437277.1| shikimate kinase [Corynebacterium pseudotuberculosis Cp162]
gi|349735218|gb|AEQ06696.1| Shikimate kinase [Corynebacterium pseudotuberculosis CIP 52.97]
gi|355392527|gb|AER69192.1| Shikimate kinase [Corynebacterium pseudotuberculosis 1/06-A]
gi|377654145|gb|AFB72494.1| Shikimate kinase [Corynebacterium pseudotuberculosis 316]
gi|388247799|gb|AFK16790.1| Shikimate kinase [Corynebacterium pseudotuberculosis 258]
gi|390531755|gb|AFM07484.1| Shikimate kinase [Corynebacterium pseudotuberculosis Cp162]
Length = 198
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 56/102 (54%), Gaps = 4/102 (3%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQ-AET 154
V LVG A KT +GK LA+AL + D+D+L+ E + G+S F + E +++ E+
Sbjct: 32 VVLVGPPGAGKTTVGKRLANALHTNFVDTDALI-EQSTGQSCGAVFSKIGEPEFRKLEES 90
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPP 196
+V + L + G VV G GAV S LL +WIDV P
Sbjct: 91 KVREALGTSG--VVSLGGGAVLSPLTRNLLLGHTVIWIDVDP 130
>gi|430805798|ref|ZP_19432913.1| shikimate kinase [Cupriavidus sp. HMR-1]
gi|429501957|gb|ELA00281.1| shikimate kinase [Cupriavidus sp. HMR-1]
Length = 199
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++F VG+ A KT +G+ +A L Y +FDSD EA G F E G++ E
Sbjct: 7 NIFFVGLMGAGKTTVGRTVARRLNYPFFDSDH-ELEARCGVRIPIIFEHEGEAGFRDREA 65
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPP 196
+V+ +L+ +V+ G GAV N A L+ +G +++ P
Sbjct: 66 QVIAELTGRSGIVLATGGGAVLREVNRAALKANGTVVYLRASP 108
>gi|343518199|ref|ZP_08755193.1| shikimate kinase 1 [Haemophilus pittmaniae HK 85]
gi|343393995|gb|EGV06545.1| shikimate kinase 1 [Haemophilus pittmaniae HK 85]
Length = 180
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 58/99 (58%), Gaps = 2/99 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L+ + DSD+++ E AG + + F E+G+++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRQLAQQLKMDFLDSDAVIEERAGAD-ISWIFDLEGEEGFRKREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWI 192
+++ +L+ M +V+ G GA+ S N L GI +++
Sbjct: 65 KIINELTQMQGIVLSTGGGAIMSKENRNYLSARGIVIYL 103
>gi|255320221|ref|ZP_05361406.1| shikimate kinase [Acinetobacter radioresistens SK82]
gi|255302660|gb|EET81892.1| shikimate kinase [Acinetobacter radioresistens SK82]
Length = 183
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+++LVG A KT +G+ LA+ L + DSD E G + F + E G++ ET
Sbjct: 11 NIYLVGPMGAGKTTVGRHLAELLGREFLDSDH-ELERKTGANIPWIFEKEGEAGFRSRET 69
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVP 195
V+ QL+ +LV+ G GAV + N L+ GI +++ P
Sbjct: 70 AVIDQLTLRQKLVLATGGGAVTQAPNREFLKQRGIVVYLYTP 111
>gi|94312198|ref|YP_585408.1| shikimate kinase [Cupriavidus metallidurans CH34]
gi|93356050|gb|ABF10139.1| shikimate kinase [Cupriavidus metallidurans CH34]
Length = 229
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++F VG+ A KT +G+ +A L Y +FDSD EA G F E G++ E
Sbjct: 37 NIFFVGLMGAGKTTVGRTVARRLNYPFFDSDH-ELEARCGVRIPIIFEHEGEAGFRDREA 95
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPP 196
+V+ +L+ +V+ G GAV N A L+ +G +++ P
Sbjct: 96 QVIAELTGRSGIVLATGGGAVLREVNRAALKANGTVVYLRASP 138
>gi|32488697|emb|CAE03634.1| OSJNBb0003B01.26 [Oryza sativa Japonica Group]
Length = 231
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 81/187 (43%), Gaps = 44/187 (23%)
Query: 75 DPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGG 134
D + +K+KA D+ L ++LVGM + KT +GK LA+ L Y +FD
Sbjct: 73 DEALVLKQKAEDVVPYLNDRCIYLVGMMGSGKTTVGKILAEVLGYSFFD----------- 121
Query: 135 ESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDV 194
R +KG + + L ++ R + G +A+ LL
Sbjct: 122 -------RSYMKKG---STIWLDVPLDALARRIAAVG------TASRPLLHQ-------- 157
Query: 195 PPGMVARMDHSGFPESEVLPQLFALYKEMRDGYATADVTVSLQKVASQLGYDDLDAVTTE 254
SG P ++ +L AL+++ D YA AD VSL+ +A + G+ ++ +T
Sbjct: 158 ---------ESGDPYAKAYAKLTALFEQRMDSYANADARVSLEHIAVKQGHSNVTTLTPS 208
Query: 255 DMTLEVK 261
+ +E K
Sbjct: 209 AIAIEGK 215
>gi|300858561|ref|YP_003783544.1| shikimate kinase [Corynebacterium pseudotuberculosis FRC41]
gi|375288738|ref|YP_005123279.1| shikimate kinase [Corynebacterium pseudotuberculosis 3/99-5]
gi|383314323|ref|YP_005375178.1| shikimate kinase [Corynebacterium pseudotuberculosis P54B96]
gi|384504745|ref|YP_005681415.1| shikimate kinase [Corynebacterium pseudotuberculosis 1002]
gi|384506838|ref|YP_005683507.1| shikimate kinase [Corynebacterium pseudotuberculosis C231]
gi|384508925|ref|YP_005685593.1| shikimate kinase [Corynebacterium pseudotuberculosis I19]
gi|384511017|ref|YP_005690595.1| shikimate kinase [Corynebacterium pseudotuberculosis PAT10]
gi|385807620|ref|YP_005844017.1| shikimate kinase [Corynebacterium pseudotuberculosis 267]
gi|387136670|ref|YP_005692650.1| shikimate kinase [Corynebacterium pseudotuberculosis 42/02-A]
gi|300686015|gb|ADK28937.1| Shikimate kinase [Corynebacterium pseudotuberculosis FRC41]
gi|302206273|gb|ADL10615.1| Shikimate kinase [Corynebacterium pseudotuberculosis C231]
gi|302330831|gb|ADL21025.1| Shikimate kinase [Corynebacterium pseudotuberculosis 1002]
gi|308276515|gb|ADO26414.1| Shikimate kinase [Corynebacterium pseudotuberculosis I19]
gi|341824956|gb|AEK92477.1| Shikimate kinase [Corynebacterium pseudotuberculosis PAT10]
gi|348607115|gb|AEP70388.1| Shikimate kinase [Corynebacterium pseudotuberculosis 42/02-A]
gi|371576027|gb|AEX39630.1| Shikimate kinase [Corynebacterium pseudotuberculosis 3/99-5]
gi|380869824|gb|AFF22298.1| Shikimate kinase [Corynebacterium pseudotuberculosis P54B96]
gi|383805013|gb|AFH52092.1| Shikimate kinase [Corynebacterium pseudotuberculosis 267]
Length = 198
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 56/102 (54%), Gaps = 4/102 (3%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQ-AET 154
V LVG A KT +GK LA+AL + D+D+L+ E + G+S F + E +++ E+
Sbjct: 32 VVLVGPPGAGKTTVGKRLANALHTNFVDTDALI-EQSTGQSCGAVFSKIGEPEFRKLEES 90
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPP 196
+V + L + G VV G GAV S LL +WIDV P
Sbjct: 91 KVREALGTSG--VVSLGGGAVLSPLTRNLLLGHTVIWIDVDP 130
>gi|386740473|ref|YP_006213653.1| shikimate kinase [Corynebacterium pseudotuberculosis 31]
gi|384477167|gb|AFH90963.1| Shikimate kinase [Corynebacterium pseudotuberculosis 31]
Length = 193
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 56/102 (54%), Gaps = 4/102 (3%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQ-AET 154
V LVG A KT +GK LA+AL + D+D+L+ E + G+S F + E +++ E+
Sbjct: 27 VVLVGPPGAGKTTVGKRLANALHTNFVDTDALI-EQSTGQSCGAVFSKIGEPEFRKLEES 85
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPP 196
+V + L + G VV G GAV S LL +WIDV P
Sbjct: 86 KVREALGTSG--VVSLGGGAVLSPLTRNLLLGHTVIWIDVDP 125
>gi|85713793|ref|ZP_01044783.1| shikimate kinase [Nitrobacter sp. Nb-311A]
gi|85699697|gb|EAQ37564.1| shikimate kinase [Nitrobacter sp. Nb-311A]
Length = 196
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
Query: 87 ISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDE 146
I T L G S+ LVGM A K+ +G+ LA L + D+D+ + E A G S + F E
Sbjct: 19 IVTALAGRSLALVGMMGAGKSTIGRRLAARLGMRFVDADAEI-ELAAGMSIPEIFETHGE 77
Query: 147 KGYQQAETEVLKQLSSMGRLVVCAGNGA-VQSSANLALLRHGISLWI 192
++ E V+ +L + G +V+ G GA ++ + L +S+W+
Sbjct: 78 PHFRDGEARVIARLLNGGPIVLATGGGAMLRDETRIRLCERAVSIWL 124
>gi|407768620|ref|ZP_11115998.1| shikimate kinase [Thalassospira xiamenensis M-5 = DSM 17429]
gi|407288304|gb|EKF13782.1| shikimate kinase [Thalassospira xiamenensis M-5 = DSM 17429]
Length = 200
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 59/109 (54%), Gaps = 2/109 (1%)
Query: 85 ADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRES 144
A+I T LKG + +G+ A K+ +G+ +A AL + D+D + EAAG S A F+
Sbjct: 16 ANIRTGLKGRPLVFIGLMGAGKSCIGRMVAKALDLDFVDADREIEEAAGC-SIADIFKLY 74
Query: 145 DEKGYQQAETEVLKQLSSMGRLVVCAGNGA-VQSSANLALLRHGISLWI 192
E+ +++ E V+ +L LV+ G GA ++ +L +S+W+
Sbjct: 75 GEEAFREGEERVIARLLDGEPLVLATGGGAFIREKTRELILEKSVSVWL 123
>gi|389876203|ref|YP_006369768.1| 3-dehydroquinate synthase [Tistrella mobilis KA081020-065]
gi|388526987|gb|AFK52184.1| 3-dehydroquinate synthase [Tistrella mobilis KA081020-065]
Length = 184
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 8/158 (5%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+ LVG+ K+ +G+ LA L + D+D+ + E A G + FR E +++ E
Sbjct: 6 IVLVGLMGVGKSSVGRRLAQRLGIDFVDADTEI-EKAAGLPVPEIFRLYGEAEFRRGERR 64
Query: 156 VLKQLSSMGRLVVCAGNGA-VQSSANLALLRHGISLWIDVPPGMVAR----MDHSG--FP 208
VL +L V+ G GA + A+ R GIS+W+ ++AR H+
Sbjct: 65 VLARLLEERPRVIATGGGAFMDPETRAAIARDGISVWLKAELPVIARRVLKRRHTRPLIA 124
Query: 209 ESEVLPQLFALYKEMRDGYATADVTVSLQKVASQLGYD 246
E + + L L +E YA AD+TV + ++ D
Sbjct: 125 EGDAMATLERLIRERHPVYAEADLTVESTEAPHEVAVD 162
>gi|227833211|ref|YP_002834918.1| shikimate kinase [Corynebacterium aurimucosum ATCC 700975]
gi|262184197|ref|ZP_06043618.1| shikimate kinase [Corynebacterium aurimucosum ATCC 700975]
gi|227454227|gb|ACP32980.1| Shikimate kinase [Corynebacterium aurimucosum ATCC 700975]
Length = 169
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 59/102 (57%), Gaps = 4/102 (3%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
V LVG + KT +G+ L+ AL DSD+L+ EA G++ + F E E +++ E E
Sbjct: 6 VVLVGPPGSGKTTIGRRLSRALNCEVVDSDALI-EARYGKACGEVFSELGEPKFREVEAE 64
Query: 156 VLKQ-LSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPP 196
V+++ L++ G VV G GAV S + ALL +++D+ P
Sbjct: 65 VVREALATTG--VVSLGGGAVLSESTRALLDSLTVVFLDITP 104
>gi|169632251|ref|YP_001705987.1| shikimate kinase [Acinetobacter baumannii SDF]
gi|169794486|ref|YP_001712279.1| shikimate kinase [Acinetobacter baumannii AYE]
gi|238688068|sp|B0V8M8.1|AROK_ACIBY RecName: Full=Shikimate kinase; Short=SK
gi|238688154|sp|B0VQ33.1|AROK_ACIBS RecName: Full=Shikimate kinase; Short=SK
gi|169147413|emb|CAM85274.1| shikimate-kinase [Acinetobacter baumannii AYE]
gi|169151043|emb|CAO99696.1| shikimate-kinase [Acinetobacter baumannii]
Length = 180
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+++LVG A KT +G+ LA+ L + DSD + E G + F + E G++ ET
Sbjct: 11 NIYLVGPMGAGKTTVGRHLAELLGREFLDSDHEI-ERKTGATIPWIFEKEGEVGFRTRET 69
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVP 195
VL +L+S LV+ G GA+ + N L+ GI +++ P
Sbjct: 70 VVLNELTSRKALVLATGGGAITQAPNREFLKQRGIVVYLYTP 111
>gi|308811598|ref|XP_003083107.1| AROK_SYNY3 Shikimate kinase (ISS) [Ostreococcus tauri]
gi|116054985|emb|CAL57062.1| AROK_SYNY3 Shikimate kinase (ISS) [Ostreococcus tauri]
Length = 272
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Query: 87 ISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDE 146
++ +L GTSVFL+G+ K+ +G LA A+ Y + D+D L+ + ++ A+ F E E
Sbjct: 47 VADKLVGTSVFLIGIMGTGKSTVGAALAKAMGYKHLDTDELI-QGVTKKTPAELFAELGE 105
Query: 147 KGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWI 192
++ E+ +L ++++ VV G G V N L +G+++ +
Sbjct: 106 SEFRAIESLILAEVAAYKNCVVSTGGGIVCERTNWMHLHNGVTVRL 151
>gi|225621324|ref|YP_002722582.1| shikimate kinase [Brachyspira hyodysenteriae WA1]
gi|225216144|gb|ACN84878.1| shikimate kinase [Brachyspira hyodysenteriae WA1]
Length = 175
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 55/101 (54%), Gaps = 2/101 (1%)
Query: 100 GMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEVLKQ 159
G+ K+ L K LA+ L Y +D DS + E G + F + E ++ E+EVL++
Sbjct: 14 GLPGCGKSALSKMLAEKLNYDLYDMDSFI-EKREGRTITDIFAKDGEPYFRNIESEVLEE 72
Query: 160 LSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMV 199
LS++ V+ G G V + N +++ G++++ID P ++
Sbjct: 73 LSNLNNAVISTGGGIVLAEKNRNIMKDKGLTIFIDRSPDII 113
>gi|421662947|ref|ZP_16103101.1| shikimate kinase 1 [Acinetobacter baumannii OIFC110]
gi|421693675|ref|ZP_16133308.1| shikimate kinase 1 [Acinetobacter baumannii WC-692]
gi|404570312|gb|EKA75389.1| shikimate kinase 1 [Acinetobacter baumannii WC-692]
gi|408713975|gb|EKL59130.1| shikimate kinase 1 [Acinetobacter baumannii OIFC110]
Length = 189
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+++LVG A KT +G+ LA+ L + DSD + E G + F + E G++ ET
Sbjct: 20 NIYLVGPMGAGKTTVGRHLAELLGREFLDSDHEI-ERKTGATIPWIFEKEGEVGFRTRET 78
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVP 195
VL +L+S LV+ G GA+ + N L+ GI +++ P
Sbjct: 79 VVLNELTSRKALVLATGGGAITQAPNREFLKQRGIVVYLYTP 120
>gi|91200496|emb|CAJ73544.1| similar to shikimate kinase I [Candidatus Kuenenia stuttgartiensis]
Length = 187
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 63/133 (47%), Gaps = 4/133 (3%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FL+G KT +GK LA L Y D+D + E G++ F E DE +++ E+
Sbjct: 2 NIFLIGFRGTGKTSVGKILAQRLNRKYIDADEYL-EQKEGKTIKDIFEECDEGKFREIES 60
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVPPGMVARMDHSGFPESEVL 213
+V+ +L V+ G G V N+ ++ G+++ ++ + + +
Sbjct: 61 DVIAELCLQNNTVIATGGGVVIKEENVKRMKKCGVAILLEADADTLYKRIKGDITSTTKR 120
Query: 214 PQL--FALYKEMR 224
P L + Y+E+R
Sbjct: 121 PGLTNYGEYQEIR 133
>gi|409408007|ref|ZP_11256451.1| 3-dehydroquinate synthase/shikimate kinase [Herbaspirillum sp.
GW103]
gi|386432463|gb|EIJ45290.1| 3-dehydroquinate synthase/shikimate kinase [Herbaspirillum sp.
GW103]
Length = 599
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
S+FLVG+ A KT +G+ LA L + DSD + EA G + F E+ +++ E
Sbjct: 4 SIFLVGLMGAGKTTIGRALAKKLNKRFVDSDHEI-EARTGATIPVIFEIEGEENFRRREA 62
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRHG 187
EV+++L++ +V+ G GA+ + N L+ G
Sbjct: 63 EVIRELAAQPDIVLATGGGAILRAENRENLKKG 95
>gi|313114631|ref|ZP_07800138.1| shikimate kinase [Faecalibacterium cf. prausnitzii KLE1255]
gi|310623034|gb|EFQ06482.1| shikimate kinase [Faecalibacterium cf. prausnitzii KLE1255]
Length = 420
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 4/123 (3%)
Query: 74 EDPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAG 133
ED +++ A + ++ ++ L+GM ++ KT LG+ LA +L + D D + +
Sbjct: 240 EDAPVEIRRITAALRRDM--LNIALIGMPSSGKTTLGRMLAKSLGRTFVDLDEEIVK-TD 296
Query: 134 GESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANL-ALLRHGISLWI 192
G S F E G++ ET ++ GR ++ G G V+ NL AL ++G+ L+I
Sbjct: 297 GRSIPDIFAAEGEDGFRTKETAETQRFGKEGRQLISCGGGIVKKPENLRALHQNGVILFI 356
Query: 193 DVP 195
D P
Sbjct: 357 DRP 359
>gi|184159707|ref|YP_001848046.1| shikimate kinase [Acinetobacter baumannii ACICU]
gi|213158942|ref|YP_002320940.1| shikimate kinase [Acinetobacter baumannii AB0057]
gi|215482075|ref|YP_002324257.1| Shikimate kinase(SK) [Acinetobacter baumannii AB307-0294]
gi|239501962|ref|ZP_04661272.1| shikimate kinase [Acinetobacter baumannii AB900]
gi|260556919|ref|ZP_05829136.1| shikimate kinase [Acinetobacter baumannii ATCC 19606 = CIP 70.34]
gi|301345423|ref|ZP_07226164.1| shikimate kinase [Acinetobacter baumannii AB056]
gi|301510069|ref|ZP_07235306.1| shikimate kinase [Acinetobacter baumannii AB058]
gi|301595995|ref|ZP_07241003.1| shikimate kinase [Acinetobacter baumannii AB059]
gi|332851352|ref|ZP_08433404.1| shikimate kinase [Acinetobacter baumannii 6013150]
gi|332868763|ref|ZP_08438386.1| shikimate kinase [Acinetobacter baumannii 6013113]
gi|332873778|ref|ZP_08441720.1| shikimate kinase [Acinetobacter baumannii 6014059]
gi|384133400|ref|YP_005516012.1| aroK [Acinetobacter baumannii 1656-2]
gi|384144820|ref|YP_005527530.1| shikimate kinase [Acinetobacter baumannii MDR-ZJ06]
gi|385239137|ref|YP_005800476.1| shikimate kinase [Acinetobacter baumannii TCDC-AB0715]
gi|387122376|ref|YP_006288258.1| shikimate kinase [Acinetobacter baumannii MDR-TJ]
gi|403673593|ref|ZP_10935888.1| shikimate kinase [Acinetobacter sp. NCTC 10304]
gi|407934291|ref|YP_006849934.1| aroK [Acinetobacter baumannii TYTH-1]
gi|416148880|ref|ZP_11602575.1| shikimate kinase [Acinetobacter baumannii AB210]
gi|417545669|ref|ZP_12196755.1| shikimate kinase 1 [Acinetobacter baumannii OIFC032]
gi|417550760|ref|ZP_12201839.1| shikimate kinase 1 [Acinetobacter baumannii Naval-18]
gi|417553726|ref|ZP_12204795.1| shikimate kinase 1 [Acinetobacter baumannii Naval-81]
gi|417563185|ref|ZP_12214064.1| shikimate kinase 1 [Acinetobacter baumannii OIFC137]
gi|417565637|ref|ZP_12216511.1| shikimate kinase 1 [Acinetobacter baumannii OIFC143]
gi|417571363|ref|ZP_12222220.1| shikimate kinase 1 [Acinetobacter baumannii OIFC189]
gi|417572573|ref|ZP_12223427.1| shikimate kinase 1 [Acinetobacter baumannii Canada BC-5]
gi|417576402|ref|ZP_12227247.1| shikimate kinase [Acinetobacter baumannii Naval-17]
gi|417872116|ref|ZP_12517026.1| shikimate kinase [Acinetobacter baumannii ABNIH1]
gi|417875224|ref|ZP_12520044.1| shikimate kinase [Acinetobacter baumannii ABNIH2]
gi|417880220|ref|ZP_12524754.1| shikimate kinase [Acinetobacter baumannii ABNIH3]
gi|417881175|ref|ZP_12525524.1| shikimate kinase [Acinetobacter baumannii ABNIH4]
gi|421199457|ref|ZP_15656618.1| shikimate kinase 1 [Acinetobacter baumannii OIFC109]
gi|421202134|ref|ZP_15659286.1| shikimate kinase [Acinetobacter baumannii AC12]
gi|421455549|ref|ZP_15904893.1| shikimate kinase 1 [Acinetobacter baumannii IS-123]
gi|421535131|ref|ZP_15981395.1| shikimate kinase [Acinetobacter baumannii AC30]
gi|421620977|ref|ZP_16061905.1| shikimate kinase 1 [Acinetobacter baumannii OIFC074]
gi|421624270|ref|ZP_16065143.1| shikimate kinase 1 [Acinetobacter baumannii OIFC098]
gi|421628736|ref|ZP_16069502.1| shikimate kinase 1 [Acinetobacter baumannii OIFC180]
gi|421635296|ref|ZP_16075899.1| shikimate kinase 1 [Acinetobacter baumannii Naval-13]
gi|421641841|ref|ZP_16082372.1| shikimate kinase 1 [Acinetobacter baumannii IS-235]
gi|421647641|ref|ZP_16088052.1| shikimate kinase 1 [Acinetobacter baumannii IS-251]
gi|421649909|ref|ZP_16090291.1| shikimate kinase 1 [Acinetobacter baumannii OIFC0162]
gi|421654478|ref|ZP_16094805.1| shikimate kinase 1 [Acinetobacter baumannii Naval-72]
gi|421659713|ref|ZP_16099929.1| shikimate kinase 1 [Acinetobacter baumannii Naval-83]
gi|421668116|ref|ZP_16108156.1| shikimate kinase 1 [Acinetobacter baumannii OIFC087]
gi|421668998|ref|ZP_16109026.1| shikimate kinase 1 [Acinetobacter baumannii OIFC099]
gi|421673803|ref|ZP_16113740.1| shikimate kinase 1 [Acinetobacter baumannii OIFC065]
gi|421680373|ref|ZP_16120228.1| shikimate kinase 1 [Acinetobacter baumannii OIFC111]
gi|421688643|ref|ZP_16128341.1| shikimate kinase 1 [Acinetobacter baumannii IS-143]
gi|421690289|ref|ZP_16129960.1| shikimate kinase 1 [Acinetobacter baumannii IS-116]
gi|421698226|ref|ZP_16137768.1| shikimate kinase 1 [Acinetobacter baumannii IS-58]
gi|421704968|ref|ZP_16144409.1| shikimate kinase [Acinetobacter baumannii ZWS1122]
gi|421708747|ref|ZP_16148120.1| shikimate kinase [Acinetobacter baumannii ZWS1219]
gi|421788911|ref|ZP_16225179.1| shikimate kinase 1 [Acinetobacter baumannii Naval-82]
gi|421791063|ref|ZP_16227251.1| shikimate kinase 1 [Acinetobacter baumannii Naval-2]
gi|421797138|ref|ZP_16233186.1| shikimate kinase 1 [Acinetobacter baumannii Naval-21]
gi|421800233|ref|ZP_16236212.1| shikimate kinase 1 [Acinetobacter baumannii Canada BC1]
gi|421803744|ref|ZP_16239656.1| shikimate kinase 1 [Acinetobacter baumannii WC-A-694]
gi|421807149|ref|ZP_16243010.1| shikimate kinase 1 [Acinetobacter baumannii OIFC035]
gi|424050748|ref|ZP_17788284.1| shikimate kinase [Acinetobacter baumannii Ab11111]
gi|424058446|ref|ZP_17795943.1| shikimate kinase [Acinetobacter baumannii Ab33333]
gi|424061917|ref|ZP_17799404.1| shikimate kinase [Acinetobacter baumannii Ab44444]
gi|425748421|ref|ZP_18866408.1| shikimate kinase 1 [Acinetobacter baumannii WC-348]
gi|425753994|ref|ZP_18871861.1| shikimate kinase 1 [Acinetobacter baumannii Naval-113]
gi|445410553|ref|ZP_21432869.1| shikimate kinase 1 [Acinetobacter baumannii Naval-57]
gi|445442409|ref|ZP_21442356.1| shikimate kinase 1 [Acinetobacter baumannii WC-A-92]
gi|445460931|ref|ZP_21448530.1| shikimate kinase 1 [Acinetobacter baumannii OIFC047]
gi|445470590|ref|ZP_21451522.1| shikimate kinase 1 [Acinetobacter baumannii OIFC338]
gi|445478755|ref|ZP_21454878.1| shikimate kinase 1 [Acinetobacter baumannii Naval-78]
gi|445489960|ref|ZP_21458968.1| shikimate kinase 1 [Acinetobacter baumannii AA-014]
gi|183211301|gb|ACC58699.1| Shikimate kinase [Acinetobacter baumannii ACICU]
gi|193078560|gb|ABO13583.2| shikimate-kinase [Acinetobacter baumannii ATCC 17978]
gi|213058102|gb|ACJ43004.1| shikimate kinase [Acinetobacter baumannii AB0057]
gi|213986290|gb|ACJ56589.1| Shikimate kinase(SK) [Acinetobacter baumannii AB307-0294]
gi|260409525|gb|EEX02826.1| shikimate kinase [Acinetobacter baumannii ATCC 19606 = CIP 70.34]
gi|322509620|gb|ADX05074.1| aroK [Acinetobacter baumannii 1656-2]
gi|323519638|gb|ADX94019.1| shikimate kinase [Acinetobacter baumannii TCDC-AB0715]
gi|332730068|gb|EGJ61396.1| shikimate kinase [Acinetobacter baumannii 6013150]
gi|332733192|gb|EGJ64389.1| shikimate kinase [Acinetobacter baumannii 6013113]
gi|332738001|gb|EGJ68886.1| shikimate kinase [Acinetobacter baumannii 6014059]
gi|333364707|gb|EGK46721.1| shikimate kinase [Acinetobacter baumannii AB210]
gi|342223805|gb|EGT88888.1| shikimate kinase [Acinetobacter baumannii ABNIH1]
gi|342225651|gb|EGT90639.1| shikimate kinase [Acinetobacter baumannii ABNIH3]
gi|342226505|gb|EGT91473.1| shikimate kinase [Acinetobacter baumannii ABNIH2]
gi|342239134|gb|EGU03547.1| shikimate kinase [Acinetobacter baumannii ABNIH4]
gi|347595313|gb|AEP08034.1| shikimate kinase [Acinetobacter baumannii MDR-ZJ06]
gi|385876868|gb|AFI93963.1| shikimate kinase [Acinetobacter baumannii MDR-TJ]
gi|395525767|gb|EJG13856.1| shikimate kinase 1 [Acinetobacter baumannii OIFC137]
gi|395551811|gb|EJG17820.1| shikimate kinase 1 [Acinetobacter baumannii OIFC189]
gi|395557393|gb|EJG23394.1| shikimate kinase 1 [Acinetobacter baumannii OIFC143]
gi|395564454|gb|EJG26105.1| shikimate kinase 1 [Acinetobacter baumannii OIFC109]
gi|395569623|gb|EJG30285.1| shikimate kinase [Acinetobacter baumannii Naval-17]
gi|398328440|gb|EJN44566.1| shikimate kinase [Acinetobacter baumannii AC12]
gi|400208141|gb|EJO39111.1| shikimate kinase 1 [Acinetobacter baumannii Canada BC-5]
gi|400211787|gb|EJO42749.1| shikimate kinase 1 [Acinetobacter baumannii IS-123]
gi|400383557|gb|EJP42235.1| shikimate kinase 1 [Acinetobacter baumannii OIFC032]
gi|400386585|gb|EJP49659.1| shikimate kinase 1 [Acinetobacter baumannii Naval-18]
gi|400390143|gb|EJP57190.1| shikimate kinase 1 [Acinetobacter baumannii Naval-81]
gi|404560400|gb|EKA65643.1| shikimate kinase 1 [Acinetobacter baumannii IS-143]
gi|404564561|gb|EKA69740.1| shikimate kinase 1 [Acinetobacter baumannii IS-116]
gi|404572526|gb|EKA77568.1| shikimate kinase 1 [Acinetobacter baumannii IS-58]
gi|404665688|gb|EKB33650.1| shikimate kinase [Acinetobacter baumannii Ab33333]
gi|404669501|gb|EKB37394.1| shikimate kinase [Acinetobacter baumannii Ab11111]
gi|404674329|gb|EKB42077.1| shikimate kinase [Acinetobacter baumannii Ab44444]
gi|407189061|gb|EKE60289.1| shikimate kinase [Acinetobacter baumannii ZWS1122]
gi|407189475|gb|EKE60701.1| shikimate kinase [Acinetobacter baumannii ZWS1219]
gi|407902872|gb|AFU39703.1| aroK [Acinetobacter baumannii TYTH-1]
gi|408510249|gb|EKK11911.1| shikimate kinase 1 [Acinetobacter baumannii Naval-72]
gi|408512308|gb|EKK13953.1| shikimate kinase 1 [Acinetobacter baumannii OIFC0162]
gi|408514593|gb|EKK16199.1| shikimate kinase 1 [Acinetobacter baumannii IS-235]
gi|408515835|gb|EKK17414.1| shikimate kinase 1 [Acinetobacter baumannii IS-251]
gi|408699837|gb|EKL45312.1| shikimate kinase 1 [Acinetobacter baumannii OIFC074]
gi|408701838|gb|EKL47260.1| shikimate kinase 1 [Acinetobacter baumannii OIFC098]
gi|408702848|gb|EKL48256.1| shikimate kinase 1 [Acinetobacter baumannii Naval-13]
gi|408705727|gb|EKL51061.1| shikimate kinase 1 [Acinetobacter baumannii OIFC180]
gi|408707046|gb|EKL52340.1| shikimate kinase 1 [Acinetobacter baumannii Naval-83]
gi|409987011|gb|EKO43200.1| shikimate kinase [Acinetobacter baumannii AC30]
gi|410380554|gb|EKP33134.1| shikimate kinase 1 [Acinetobacter baumannii OIFC087]
gi|410386021|gb|EKP38505.1| shikimate kinase 1 [Acinetobacter baumannii OIFC065]
gi|410389125|gb|EKP41540.1| shikimate kinase 1 [Acinetobacter baumannii OIFC099]
gi|410389742|gb|EKP42153.1| shikimate kinase 1 [Acinetobacter baumannii OIFC111]
gi|410397633|gb|EKP49879.1| shikimate kinase 1 [Acinetobacter baumannii Naval-21]
gi|410399797|gb|EKP51978.1| shikimate kinase 1 [Acinetobacter baumannii Naval-82]
gi|410403941|gb|EKP56015.1| shikimate kinase 1 [Acinetobacter baumannii Naval-2]
gi|410408441|gb|EKP60409.1| shikimate kinase 1 [Acinetobacter baumannii Canada BC1]
gi|410412210|gb|EKP64069.1| shikimate kinase 1 [Acinetobacter baumannii WC-A-694]
gi|410416791|gb|EKP68562.1| shikimate kinase 1 [Acinetobacter baumannii OIFC035]
gi|425491302|gb|EKU57587.1| shikimate kinase 1 [Acinetobacter baumannii WC-348]
gi|425497387|gb|EKU63493.1| shikimate kinase 1 [Acinetobacter baumannii Naval-113]
gi|444763929|gb|ELW88263.1| shikimate kinase 1 [Acinetobacter baumannii WC-A-92]
gi|444766402|gb|ELW90677.1| shikimate kinase 1 [Acinetobacter baumannii AA-014]
gi|444772395|gb|ELW96513.1| shikimate kinase 1 [Acinetobacter baumannii OIFC047]
gi|444772544|gb|ELW96659.1| shikimate kinase 1 [Acinetobacter baumannii OIFC338]
gi|444774828|gb|ELW98904.1| shikimate kinase 1 [Acinetobacter baumannii Naval-78]
gi|444779726|gb|ELX03699.1| shikimate kinase 1 [Acinetobacter baumannii Naval-57]
gi|452949415|gb|EME54883.1| shikimate kinase [Acinetobacter baumannii MSP4-16]
Length = 189
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+++LVG A KT +G+ LA+ L + DSD + E G + F + E G++ ET
Sbjct: 20 NIYLVGPMGAGKTTVGRHLAELLGREFLDSDHEI-ERKTGATIPWIFEKEGEVGFRTRET 78
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVP 195
VL +L+S LV+ G GA+ + N L+ GI +++ P
Sbjct: 79 VVLNELTSRKALVLATGGGAITQAPNREFLKQRGIVVYLYTP 120
>gi|241759403|ref|ZP_04757507.1| shikimate kinase [Neisseria flavescens SK114]
gi|241320185|gb|EER56518.1| shikimate kinase [Neisseria flavescens SK114]
Length = 170
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 57/103 (55%), Gaps = 2/103 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L+G+ A KT LGK LA ++DSD + ++G + F E+G++ ET
Sbjct: 7 NLILIGLMGAGKTTLGKQLAQMFECPFYDSDYEICTSSG-VTIPTIFEMEGEEGFRNRET 65
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPP 196
+LK+L+S +V+ G G+V S N +LR +G +++ P
Sbjct: 66 NMLKKLASRRNIVLSTGGGSVLRSENRQILRQNGTVVYLHASP 108
>gi|340361239|ref|ZP_08683672.1| shikimate kinase [Neisseria macacae ATCC 33926]
gi|339888867|gb|EGQ78292.1| shikimate kinase [Neisseria macacae ATCC 33926]
Length = 173
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 58/103 (56%), Gaps = 2/103 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L+G+ A KT LG+++A L ++DSD + A+G S F E+G++ ET
Sbjct: 10 NLILIGLMGAGKTTLGRYIAQMLDRPFYDSDHEICTASG-VSIPIIFEMEGEQGFRNRET 68
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLA-LLRHGISLWIDVPP 196
+LK+L++M +++ G G+V N + R+G +++ P
Sbjct: 69 AMLKKLTAMKDIILSTGGGSVLREENRQNMRRNGTVVYLHASP 111
>gi|395232603|ref|ZP_10410853.1| shikimate kinase [Enterobacter sp. Ag1]
gi|394733005|gb|EJF32644.1| shikimate kinase [Enterobacter sp. Ag1]
Length = 174
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 82/166 (49%), Gaps = 10/166 (6%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+FLVG KT +G+ LA L Y + D+DS + G +S A+ E +G++ E++
Sbjct: 5 LFLVGARGCGKTTVGQALARTLGYAFVDTDSFLLNHTG-KSVAEIVAEEGWEGFRARESD 63
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMVA-RMDHSGFPESEVL 213
L+++++ VV G G V + N ++ +GI +W+ P ++A R+ S PE
Sbjct: 64 ALQRVTAPA-TVVATGGGMVLAEGNRQFMQENGIPVWLHAPAQVLASRLTAS--PEEGQR 120
Query: 214 PQLFALYKEMRDGYATADVTVSLQKVASQLGYDDLDAVTTEDMTLE 259
P L K + D DV + + + Q+ +DA + D +E
Sbjct: 121 PTLTG--KGVTD--EIVDVLAAREGLYRQVARHIVDATRSPDAVVE 162
>gi|293610713|ref|ZP_06693013.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|375136274|ref|YP_004996924.1| shikimate-kinase [Acinetobacter calcoaceticus PHEA-2]
gi|427424099|ref|ZP_18914236.1| shikimate kinase 1 [Acinetobacter baumannii WC-136]
gi|292827057|gb|EFF85422.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|325123719|gb|ADY83242.1| shikimate-kinase [Acinetobacter calcoaceticus PHEA-2]
gi|425699207|gb|EKU68826.1| shikimate kinase 1 [Acinetobacter baumannii WC-136]
Length = 189
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+++LVG A KT +G+ LA+ L + DSD + E G + F + E G++ ET
Sbjct: 20 NIYLVGPMGAGKTTVGRHLAELLGREFLDSDHEI-ERKTGATIPWIFEKEGEFGFRTRET 78
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVP 195
VL +L+S LV+ G GA+ + N L+ GI +++ P
Sbjct: 79 VVLNELTSRKALVLATGGGAITQAPNREFLKQRGIVVYLYTP 120
>gi|404372139|ref|ZP_10977438.1| hypothetical protein CSBG_00552 [Clostridium sp. 7_2_43FAA]
gi|226911725|gb|EEH96926.1| hypothetical protein CSBG_00552 [Clostridium sp. 7_2_43FAA]
Length = 163
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 69/135 (51%), Gaps = 5/135 (3%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+ L+GM K+ +G+ LA+ + Y + D D + E + S K E+ ++ ET
Sbjct: 6 ILLIGMPGCGKSTIGEELANKINYDFCDMDKYIEEISN--STVKELFNISEEYFRDYETL 63
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVP-PGMVARMDHSGFP-ESEV 212
K+LS+ ++++ +G G ++ N+ + GI ++ID P ++ +D S P S+
Sbjct: 64 ACKELSNKSKIIISSGGGVIKRKKNIDFFKDKGIIIFIDRPIEDILKDIDTSSRPLLSDG 123
Query: 213 LPQLFALYKEMRDGY 227
+L+ LY E + Y
Sbjct: 124 KSKLYNLYSERYNLY 138
>gi|347754071|ref|YP_004861635.1| shikimate kinase [Candidatus Chloracidobacterium thermophilum B]
gi|347586589|gb|AEP11119.1| Shikimate kinase [Candidatus Chloracidobacterium thermophilum B]
Length = 199
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 71/150 (47%), Gaps = 10/150 (6%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+FLVG + KT +G+ LA L + D D + AA G S + F+ E G++Q E
Sbjct: 14 IFLVGFMGSGKTTVGQHLAARLGGRFIDLDERIARAA-GRSIPELFQTEGETGFRQREHA 72
Query: 156 VLKQLSSMGRL------VVCAGNGAVQSSANLALLRH-GISLWIDVPPGMVA-RMDHSG- 206
L Q+ + R +V G G N +R G S+W+DVP ++A R+ G
Sbjct: 73 ALVQVCAELRQDDLPWNIVALGGGTFTRPENRNHIRQTGCSVWLDVPFDILATRVVPDGR 132
Query: 207 FPESEVLPQLFALYKEMRDGYATADVTVSL 236
P + + Y++ R YA AD+ V +
Sbjct: 133 RPLWTSVDEARLRYEQRRADYAQADIRVPV 162
>gi|167587729|ref|ZP_02380117.1| shikimate kinase [Burkholderia ubonensis Bu]
Length = 184
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+VF VG+ A KT +G+ +A L +FDSD + EA G F E G+++ E
Sbjct: 9 NVFFVGLMGAGKTTVGRAVARRLDRTFFDSDHEI-EARTGARIPVIFEMEGEAGFREREA 67
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPP 196
+++ +L+ +V+ G GA+ N L+ HGI +++ P
Sbjct: 68 QMIAELAQREHIVLATGGGAILRPENRECLKSHGIVVYLRANP 110
>gi|7673955|sp|Q9X5D1.1|AROK_CORGL RecName: Full=Shikimate kinase; Short=SK
gi|4689271|gb|AAD27839.1|AF124600_2 shikimate kinase [Corynebacterium glutamicum]
Length = 169
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 54/101 (53%), Gaps = 4/101 (3%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET- 154
V LVG+ A K+ +G+ LA AL DSD L+ E A G++ F E E +++ E
Sbjct: 6 VVLVGLPGAGKSTIGRRLARALNTELVDSDELI-ERATGKACGAVFSELGEPAFRELEAI 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVP 195
V + L S G VV G G+V + + LL+ +WIDVP
Sbjct: 65 HVAEALKSSG--VVSLGGGSVLTESTRELLKGQDVVWIDVP 103
>gi|387813135|ref|YP_005428616.1| shikimate kinase [Marinobacter hydrocarbonoclasticus ATCC 49840]
gi|381338146|emb|CCG94193.1| shikimate kinase I [Marinobacter hydrocarbonoclasticus ATCC 49840]
Length = 196
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
V LVG A K+ +G+ LA L Y + DSD ++ E G + F E G++Q ET
Sbjct: 7 VVLVGPMGAGKSTIGRLLARELGYRFLDSDRIIEERCGA-NIPWIFDVEGEDGFRQRETS 65
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLR 185
+L++LS+ V+ G GAV + N LL+
Sbjct: 66 MLEELSNEVGTVLATGGGAVMRAENHGLLK 95
>gi|226953743|ref|ZP_03824207.1| shikimate-kinase [Acinetobacter sp. ATCC 27244]
gi|294651770|ref|ZP_06729068.1| shikimate kinase [Acinetobacter haemolyticus ATCC 19194]
gi|226835475|gb|EEH67858.1| shikimate-kinase [Acinetobacter sp. ATCC 27244]
gi|292822327|gb|EFF81232.1| shikimate kinase [Acinetobacter haemolyticus ATCC 19194]
Length = 183
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+++LVG A KT +G+ LA+ L + DSD + E G + F + E G++ ET
Sbjct: 14 NIYLVGPMGAGKTTVGRHLAELLGRDFMDSDHEI-ERKTGATIPWIFEKEGEVGFRLRET 72
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVP 195
VL L++ LV+ G GAV N LL+ GI +++ P
Sbjct: 73 NVLNDLTARSSLVLATGGGAVTQRPNRELLKQRGIVVYLYTP 114
>gi|345304321|ref|YP_004826223.1| shikimate kinase [Rhodothermus marinus SG0.5JP17-172]
gi|345113554|gb|AEN74386.1| Shikimate kinase [Rhodothermus marinus SG0.5JP17-172]
Length = 192
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
Query: 94 TSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAE 153
T ++L G K+ +G LA L Y + D D+L+ E G S + F E E ++ E
Sbjct: 9 TRIYLTGFMGCGKSTIGPLLARRLGYTFLDLDALI-ERQAGRSIPEIFAEGGEAAFRALE 67
Query: 154 TEVLKQLSSMGRLVVCAGNGAVQSSANLAL-LRHGISLWIDVPPGMVAR 201
E L++ ++ V+ G GA+ S NLA LR+G +++ V +AR
Sbjct: 68 REALRRTVALDACVIATGGGALVSDDNLAWALRNGRVVYLQVSADELAR 116
>gi|402756236|ref|ZP_10858492.1| shikimate kinase [Acinetobacter sp. NCTC 7422]
Length = 186
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+++LVG A KT +G+ LA+ L + DSD + E G + F + E G++ ET
Sbjct: 17 NIYLVGPMGAGKTTVGRHLAELLGRDFIDSDHEI-ERKTGATIPWIFEKEGEVGFRLRET 75
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVP 195
VL L+S LV+ G GA+ S N L+ GI +++ P
Sbjct: 76 NVLNDLTSRSLLVLATGGGAITQSKNREFLKQRGIVVYLYTP 117
>gi|404253800|ref|ZP_10957768.1| shikimate kinase [Sphingomonas sp. PAMC 26621]
Length = 187
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 2/109 (1%)
Query: 93 GTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQA 152
G ++ LVG+ A K+ +G+ LA L + D+DS + E A G S F E ++
Sbjct: 20 GQTIVLVGLMGAGKSTVGRRLAIRLGLPFVDADSEI-ETAAGMSIPDIFERFGEAYFRDG 78
Query: 153 ETEVLKQLSSMGRLVVCAGNGA-VQSSANLALLRHGISLWIDVPPGMVA 200
E V+ +L + R V+ G GA V +L G ++W+D P ++A
Sbjct: 79 ERRVIARLMNGDRRVIATGGGAFVDDRTRETILAQGFAVWLDAKPSVLA 127
>gi|186477542|ref|YP_001859012.1| shikimate kinase [Burkholderia phymatum STM815]
gi|184194001|gb|ACC71966.1| Shikimate kinase [Burkholderia phymatum STM815]
Length = 183
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+VF VG+ A KT +G+ +A L +FDSD + EA G F E G++ E
Sbjct: 9 NVFFVGLMGAGKTTVGRAVARRLDRPFFDSDHEI-EARTGARIPVIFELEGESGFRDREA 67
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPP 196
+V+ L+ +V+ G GAV N LR HGI +++ P
Sbjct: 68 QVIADLTGRESIVLATGGGAVLRPENREALRAHGIVVYLRANP 110
>gi|21674226|ref|NP_662291.1| shikimate kinase [Chlorobium tepidum TLS]
gi|81791053|sp|Q8KCL0.1|AROK_CHLTE RecName: Full=Shikimate kinase; Short=SK
gi|21647392|gb|AAM72633.1| shikimate kinase [Chlorobium tepidum TLS]
Length = 191
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 58/111 (52%), Gaps = 3/111 (2%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+FL G + + K+ +G LA++L + + D D + E G+S + F E E ++ E
Sbjct: 7 IFLTGFSGSGKSTIGPLLANSLGFEFIDLDREI-ELTAGKSINRIFAEDGEAAFRSLELR 65
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMVA-RMDH 204
L+++ R+VV G G +++ L+R HG +++ P ++ R+ H
Sbjct: 66 TLEKIGQQERMVVSLGGGVLENDRCFELIRSHGTLIYLKSSPEILTLRLQH 116
>gi|262377050|ref|ZP_06070276.1| shikimate kinase [Acinetobacter lwoffii SH145]
gi|262308088|gb|EEY89225.1| shikimate kinase [Acinetobacter lwoffii SH145]
Length = 188
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+++LVG A KT +G+ LA+ L + DSD + E G + F + E+G++ ET
Sbjct: 21 NIYLVGPMGAGKTTVGRHLAELLGREFLDSDHEI-ERKTGATIPWIFEKEGEQGFRDRET 79
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVP 195
V+ L+S LV+ G GA+ + N L+ GI +++ P
Sbjct: 80 AVINDLTSRPHLVLATGGGAITQTLNRDYLKQRGIVVYLYTP 121
>gi|336324067|ref|YP_004604034.1| shikimate kinase [Flexistipes sinusarabici DSM 4947]
gi|336107648|gb|AEI15466.1| Shikimate kinase [Flexistipes sinusarabici DSM 4947]
Length = 167
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 64/123 (52%), Gaps = 6/123 (4%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+++L+G + KT +GK LA+ + D D + E + G S A+ F E+ ++ E
Sbjct: 3 NIYLLGFMGSGKTSVGKRLAEKKNMTFIDLDEKI-EESEGMSIAEIFAGKGEEYFRDVEK 61
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVPPGMVARMDHSGFPESEVL 213
+VLK+LS+M +V G GAV NL +++ G+++ + P +V H S +
Sbjct: 62 KVLKELSAMDSCIVATGGGAVMDPENLQTMKNSGVTVSLLASPEIV----HERVKNSNLR 117
Query: 214 PQL 216
P L
Sbjct: 118 PLL 120
>gi|115522173|ref|YP_779084.1| shikimate kinase [Rhodopseudomonas palustris BisA53]
gi|115516120|gb|ABJ04104.1| shikimate kinase [Rhodopseudomonas palustris BisA53]
Length = 205
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 70/151 (46%), Gaps = 7/151 (4%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
SV L+GM A K+ +G+ LA L + D+D+ + EAA G + + F E ++ E
Sbjct: 26 SVVLIGMMGAGKSTVGRRLAVRLGLPFVDADTEI-EAAAGMTIPEIFETHGEPHFRDGEA 84
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLA-LLRHGISLWIDVPPGMV-----ARMDHSGFP 208
V+ +L G V+ G GA A + HG+SLW+ ++ R D
Sbjct: 85 RVIARLLEGGPHVLATGGGAFMREETRARIAAHGVSLWLQADADVILRRVKRRADRPLLK 144
Query: 209 ESEVLPQLFALYKEMRDGYATADVTVSLQKV 239
++ + L E Y TA++T++ + V
Sbjct: 145 TADPAATIARLIDERHPMYQTAEITIASRDV 175
>gi|118592098|ref|ZP_01549492.1| putative shikimate kinase [Stappia aggregata IAM 12614]
gi|118435394|gb|EAV42041.1| putative shikimate kinase [Labrenzia aggregata IAM 12614]
Length = 215
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 2/101 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
S+ LVG+ K+ +GK LA L + D+D+ + E A S A+ F E E ++ E
Sbjct: 35 SIVLVGIMGCGKSTVGKRLAHRLGLEFIDADTEI-ERAANMSVAEIFAEHGEPYFRSGEE 93
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLA-LLRHGISLWIDV 194
V+ +L G V+ G GA S A + + HG+S+W+ V
Sbjct: 94 RVIARLLREGSQVLATGGGAFMSEATRSEIAEHGLSIWLKV 134
>gi|325290048|ref|YP_004266229.1| shikimate kinase [Syntrophobotulus glycolicus DSM 8271]
gi|324965449|gb|ADY56228.1| Shikimate kinase [Syntrophobotulus glycolicus DSM 8271]
Length = 170
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 57/110 (51%), Gaps = 5/110 (4%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ LVG KT +GK LA L + + D+D + E G S + F+ E+ +++ ET
Sbjct: 4 NIILVGFMATGKTTVGKLLAHRLGWAFLDTDQEI-ERTTGLSIPEIFKRYGEESFRKEET 62
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRH---GISLWIDVPPGMVAR 201
+++Q++ M V+ G G V S + LL + LW D P ++AR
Sbjct: 63 RLVRQITKMKSTVISTGGGLVLPSDHWKLLEEVGIMVHLWAD-PDVIIAR 111
>gi|410417885|ref|YP_006898334.1| shikimate kinase I [Bordetella bronchiseptica MO149]
gi|408445180|emb|CCJ56828.1| shikimate kinase I [Bordetella bronchiseptica MO149]
Length = 211
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+FLVGM A KT +G+ LA ALR + D D EA G F E G+++ E
Sbjct: 43 IFLVGMMGAGKTTIGRGLARALRREFIDLDH-ELEARCGVRVPVIFEIEGEAGFRRREAA 101
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWI 192
L++ + ++++ G GAV ++ N LR GI +++
Sbjct: 102 ALQECTQRRQIILATGGGAVLAAENRQALRERGIVIYL 139
>gi|33599064|ref|NP_886624.1| shikimate kinase [Bordetella bronchiseptica RB50]
gi|81580333|sp|Q7WR85.1|AROK_BORBR RecName: Full=Shikimate kinase; Short=SK
gi|33575110|emb|CAE30573.1| shikimate kinase I [Bordetella bronchiseptica RB50]
Length = 211
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+FLVGM A KT +G+ LA ALR + D D EA G F E G+++ E
Sbjct: 43 IFLVGMMGAGKTTIGRGLARALRREFIDLDH-ELEARCGVRVPVIFEIEGEAGFRRREAA 101
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWI 192
L++ + ++++ G GAV ++ N LR GI +++
Sbjct: 102 ALQECTQRRQIILATGGGAVLAAENRQALRERGIVIYL 139
>gi|385809403|ref|YP_005845799.1| shikimate kinase [Ignavibacterium album JCM 16511]
gi|383801451|gb|AFH48531.1| Shikimate kinase [Ignavibacterium album JCM 16511]
Length = 183
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 84/182 (46%), Gaps = 14/182 (7%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
+K +FL G + K+ +G LA+ + + + D D V E + + F+E E+ ++
Sbjct: 1 MKRDLIFLTGFMASGKSTIGPILANTIGWDFLDLDK-VIEEKTNKKIVEIFKEYGEEYFR 59
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDV-PPGMVARM------ 202
+ E+E LK+L+ + + V+ G G +++ NL ++ GI ++++ P G R+
Sbjct: 60 KLESETLKELTKLSKYVISLGGGTIENEDNLNQMKKSGILVYLETSPEGAYRRLRFKRDR 119
Query: 203 -----DHSGFPESEVLPQLFALYKEMRDGYATADVTVSLQKVASQLGYDDLDAVTTEDMT 257
D + + E L ++ + Y AD+ ++ + D L + +D
Sbjct: 120 PALLFDDNEPTKEEFLKRINTILNRRLKYYNQADLKINTDNKPVGITVDILVKILRKDFH 179
Query: 258 LE 259
+E
Sbjct: 180 IE 181
>gi|169344512|ref|ZP_02865481.1| shikimate kinase [Clostridium perfringens C str. JGS1495]
gi|169297432|gb|EDS79541.1| shikimate kinase [Clostridium perfringens C str. JGS1495]
Length = 171
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 64/119 (53%), Gaps = 3/119 (2%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
+K V L+GM A KT +G+ L++ L+ + D D + E + G+ + F + +E ++
Sbjct: 1 MKKRGVLLIGMPGAGKTTIGRDLSNVLKMNFLDMDEFI-ERSTGKEIKELFSQGEEV-FR 58
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVAR-MDHSGFP 208
E++ + LS++ +V+ +G G V N+ + I+++I+ P ++ +D G P
Sbjct: 59 DLESKSCELLSTLKNVVISSGGGIVTREENMGNFKEFITVFINRPLDLIMEDIDTEGRP 117
>gi|33594520|ref|NP_882164.1| shikimate kinase [Bordetella pertussis Tohama I]
gi|33594792|ref|NP_882435.1| shikimate kinase [Bordetella parapertussis 12822]
gi|384205817|ref|YP_005591556.1| shikimate kinase [Bordetella pertussis CS]
gi|408416755|ref|YP_006627462.1| shikimate kinase I [Bordetella pertussis 18323]
gi|410470885|ref|YP_006894166.1| shikimate kinase I [Bordetella parapertussis Bpp5]
gi|412340627|ref|YP_006969382.1| shikimate kinase I [Bordetella bronchiseptica 253]
gi|427812324|ref|ZP_18979388.1| shikimate kinase I [Bordetella bronchiseptica 1289]
gi|427817373|ref|ZP_18984436.1| shikimate kinase I [Bordetella bronchiseptica D445]
gi|427823111|ref|ZP_18990173.1| shikimate kinase I [Bordetella bronchiseptica Bbr77]
gi|81578314|sp|Q7VT94.1|AROK_BORPE RecName: Full=Shikimate kinase; Short=SK
gi|81578957|sp|Q7W2B7.1|AROK_BORPA RecName: Full=Shikimate kinase; Short=SK
gi|33564596|emb|CAE43913.1| shikimate kinase I [Bordetella pertussis Tohama I]
gi|33564868|emb|CAE39812.1| shikimate kinase I [Bordetella parapertussis]
gi|332383931|gb|AEE68778.1| shikimate kinase [Bordetella pertussis CS]
gi|401778925|emb|CCJ64394.1| shikimate kinase I [Bordetella pertussis 18323]
gi|408440995|emb|CCJ47404.1| shikimate kinase I [Bordetella parapertussis Bpp5]
gi|408770461|emb|CCJ55255.1| shikimate kinase I [Bordetella bronchiseptica 253]
gi|410563324|emb|CCN20858.1| shikimate kinase I [Bordetella bronchiseptica 1289]
gi|410568373|emb|CCN16408.1| shikimate kinase I [Bordetella bronchiseptica D445]
gi|410588376|emb|CCN03433.1| shikimate kinase I [Bordetella bronchiseptica Bbr77]
Length = 211
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+FLVGM A KT +G+ LA ALR + D D EA G F E G+++ E
Sbjct: 43 IFLVGMMGAGKTTIGRGLARALRREFIDLDH-ELEARCGVRVPVIFEIEGEAGFRRREAA 101
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWI 192
L++ + ++++ G GAV ++ N LR GI +++
Sbjct: 102 ALQECTQRRQIILATGGGAVLAAENRQALRERGIVIYL 139
>gi|398835888|ref|ZP_10593241.1| 3-dehydroquinate synthase [Herbaspirillum sp. YR522]
gi|398214643|gb|EJN01218.1| 3-dehydroquinate synthase [Herbaspirillum sp. YR522]
Length = 568
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
S+FLVG+ + KT +G+ LA L + DSD + EA G S F E+ +++ E
Sbjct: 4 SIFLVGLMGSGKTTIGRALAKKLNKRFIDSDHEI-EARTGASIPVIFEIEGEESFRRREA 62
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRHG 187
EV+++LS+ +V+ G GA+ + A L+ G
Sbjct: 63 EVIRELSAQPDIVLATGGGAILHPDSRAHLKKG 95
>gi|407007632|gb|EKE23237.1| hypothetical protein ACD_6C00554G0003 [uncultured bacterium]
Length = 178
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+++LVG A KT +G+ LA+ L + DSD + E G + F + E+G++ ET
Sbjct: 11 NIYLVGPMGAGKTTVGRHLAELLGREFLDSDHEI-ERKTGATIPWIFEKEGEQGFRDRET 69
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVP 195
V+ L+S LV+ G GA+ + N L+ GI +++ P
Sbjct: 70 AVINDLTSRPHLVLATGGGAITQALNRDYLKQRGIVVYLYTP 111
>gi|88861009|ref|ZP_01135644.1| shikimate kinase I [Pseudoalteromonas tunicata D2]
gi|88816937|gb|EAR26757.1| shikimate kinase I [Pseudoalteromonas tunicata D2]
Length = 172
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LAD L +FDSD + E G A F E+G+++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRHLADQLHLEFFDSDQEI-ERRTGADIAWVFDIEGEEGFRRREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSS-ANLALLRHGISLWIDVP 195
V+ L+ M +V+ G G+V S L GI ++++ P
Sbjct: 65 TVISDLTEMQGIVLATGGGSVLSKDVRNKLSARGIVVYLETP 106
>gi|417301085|ref|ZP_12088256.1| shikimate kinase II [Rhodopirellula baltica WH47]
gi|327542613|gb|EGF29086.1| shikimate kinase II [Rhodopirellula baltica WH47]
Length = 187
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 55/115 (47%), Gaps = 3/115 (2%)
Query: 90 ELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGY 149
E+K ++L G K+ L K LA L D D V E G+S A+ F E G+
Sbjct: 5 EVKPQHLYLTGYRGCGKSTLAKLLAQKLSLPSVDLDD-VIETTAGKSIAEIFANETEVGF 63
Query: 150 QQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVPPG-MVARM 202
+ E L ++S R V+ G G + AN ++ + G +W+D P +VAR+
Sbjct: 64 RDREEAALAEVSRRPRHVIALGGGTILREANRNIIANSGWCVWLDAEPDILVARL 118
>gi|299768550|ref|YP_003730576.1| shikimate kinase [Acinetobacter oleivorans DR1]
gi|424744625|ref|ZP_18172916.1| shikimate kinase 1 [Acinetobacter baumannii WC-141]
gi|298698638|gb|ADI89203.1| shikimate kinase [Acinetobacter oleivorans DR1]
gi|422942838|gb|EKU37874.1| shikimate kinase 1 [Acinetobacter baumannii WC-141]
Length = 189
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+++LVG A KT +G+ LA+ L + DSD + E G + F + E G++ ET
Sbjct: 20 NIYLVGPMGAGKTTVGRHLAEILGREFLDSDHEI-ERKTGATIPWIFEKEGEFGFRARET 78
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVP 195
VL +L+S LV+ G GA+ + N L+ GI +++ P
Sbjct: 79 IVLNELTSRKALVLATGGGAITQAPNREFLKQRGIVVYLYTP 120
>gi|126341469|ref|XP_001376199.1| PREDICTED: threonine synthase-like 1-like [Monodelphis domestica]
Length = 744
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 86/189 (45%), Gaps = 16/189 (8%)
Query: 80 VKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAK 139
+KK + L ++ L+G+ A KT +GK + L D D + E + A+
Sbjct: 42 LKKSWFSTHSLLGDRNILLMGLPGAGKTTVGKIIGQKLACGVIDVDDDILETTWNMTVAE 101
Query: 140 AFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPP-GM 198
RE + + + E +VL + G ++ +G+ + + L ++GI +++DVP +
Sbjct: 102 KLREVGHEQFLEEEGKVLLNFVASGAVISLSGSNPLHDATMYYLKKNGIVVYLDVPVIDI 161
Query: 199 VARMD----------HSGFPESEVLPQLFALYKEMRDGYATADVTVSLQKVASQL----- 243
+ R++ +SG P EVL LYK+ D + S + +A ++
Sbjct: 162 INRLNLTKIDRIVGPNSGMPLKEVLQYRRQLYKKWYDIRIFCEDGASAEVIADKVFNAIK 221
Query: 244 GYDDLDAVT 252
Y+D+D+ T
Sbjct: 222 RYEDVDSET 230
>gi|260892558|ref|YP_003238655.1| shikimate kinase [Ammonifex degensii KC4]
gi|260864699|gb|ACX51805.1| Shikimate kinase [Ammonifex degensii KC4]
Length = 178
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 73/152 (48%), Gaps = 10/152 (6%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+V L+G KT +GK LA L + + D+D+ + E G+S A+ F E E ++ E
Sbjct: 3 NVVLIGFMGTGKTAVGKRLARLLGWEFIDTDAEI-ERLTGKSIARLFAEDGEIRFRSEEN 61
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRHG---ISLWIDVPPGMVARM-----DHSG 206
+ ++L+ RLV+ G G V + N+ALL I L+ D P +++R+ +
Sbjct: 62 LLCRRLAGRERLVIATGGGMVLNPENVALLGQNGVFIKLYAD-PEVIISRLKGKRRERPL 120
Query: 207 FPESEVLPQLFALYKEMRDGYATADVTVSLQK 238
++ ++ L KE Y A+ V K
Sbjct: 121 IGRGDLRERVLTLLKEREGAYDIAEFAVDTGK 152
>gi|359428745|ref|ZP_09219775.1| shikimate kinase [Acinetobacter sp. NBRC 100985]
gi|358235931|dbj|GAB01314.1| shikimate kinase [Acinetobacter sp. NBRC 100985]
Length = 186
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 71/138 (51%), Gaps = 4/138 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+++LVG A KT +G+ LA+ L + DSD + E G + F + E G++ ET
Sbjct: 17 NIYLVGPMGAGKTTVGRHLAELLGRDFIDSDHEI-ERKTGATIPWIFEKEGEVGFRLRET 75
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVPPGMVARMDHSGFPESEVL 213
VL L++ LV+ G GAV AN L+ GI +++ P + ++ + ++ L
Sbjct: 76 NVLNDLTNRSSLVLATGGGAVTQLANREFLKQRGIVVYLYTPVEL--QLQRTYRDKNRPL 133
Query: 214 PQLFALYKEMRDGYATAD 231
Q+ +++RD AT D
Sbjct: 134 LQVENPEQKLRDLLATRD 151
>gi|333368298|ref|ZP_08460507.1| shikimate kinase [Psychrobacter sp. 1501(2011)]
gi|332977544|gb|EGK14315.1| shikimate kinase [Psychrobacter sp. 1501(2011)]
Length = 182
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
S+F+VG A KT +G+ LA L + DSD + E G + F + E G+++ E
Sbjct: 7 SLFIVGPMGAGKTTIGRLLAKHLGRTFIDSDHYICEQTGAD-IPWIFEKEGEAGFREREA 65
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWI 192
+ + +L+ + +V+ G G V N L+ HGI++++
Sbjct: 66 KAIAELTELPDIVLATGGGVVTQPQNRQNLKNHGITIYL 104
>gi|374853896|dbj|BAL56792.1| shikimate kinase [uncultured prokaryote]
Length = 162
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 63/133 (47%), Gaps = 5/133 (3%)
Query: 106 KTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEVLKQLSSMGR 165
KT G+ LA L + + D D V E A G S + F + E ++ E L Q R
Sbjct: 5 KTTTGQALARRLGWSFVDLDVQV-EQAFGLSVREIFAQHGEAAFRAEEARRLWQACRTER 63
Query: 166 LVVCAGNGAVQSSANLALL-RHGISLWIDVPPGMVARMDHSGFPESEVL---PQLFALYK 221
+VV G G + AN AL+ + G+S+++DVP G + R + E + Q LY+
Sbjct: 64 VVVATGGGTFVAEANRALMQKSGVSVFLDVPWGEILRRLPDKWEERPLFRSPEQALELYR 123
Query: 222 EMRDGYATADVTV 234
Y AD+TV
Sbjct: 124 SRLPSYRLADLTV 136
>gi|254467208|ref|ZP_05080619.1| shikimate kinase [Rhodobacterales bacterium Y4I]
gi|206688116|gb|EDZ48598.1| shikimate kinase [Rhodobacterales bacterium Y4I]
Length = 196
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 80/161 (49%), Gaps = 8/161 (4%)
Query: 81 KKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKA 140
+K A +LK T + +VGM A KT +G+ LA L + DSD + EAA + +
Sbjct: 10 QKAAGPAPGKLKKT-IVMVGMMGAGKTAVGRALAARLNVPFLDSDHEI-EAAANMTIPEI 67
Query: 141 FRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMV 199
F E ++Q E +V+ +L + R V+ G GA + N ++ G+S+W+D ++
Sbjct: 68 FARDGEPFFRQKERQVIARLLAEERGVLSTGGGAFLAQENREVITAKGVSVWLDAGLDVL 127
Query: 200 -ARMDHSG----FPESEVLPQLFALYKEMRDGYATADVTVS 235
R+ H ++ L LY++ YA AD+TV+
Sbjct: 128 WNRVRHRDTRPLLRTADPYATLRNLYEQRVPLYAKADLTVA 168
>gi|222529685|ref|YP_002573567.1| shikimate kinase [Caldicellulosiruptor bescii DSM 6725]
gi|254806763|sp|B9MKD6.1|AROK_ANATD RecName: Full=Shikimate kinase; Short=SK
gi|222456532|gb|ACM60794.1| Shikimate kinase [Caldicellulosiruptor bescii DSM 6725]
Length = 172
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 57/102 (55%), Gaps = 2/102 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L G + KT +GK +A+ L D+DS V + G + K F EK +++ ET
Sbjct: 3 NIVLTGFMGSGKTTIGKLIAEKLDIELIDTDSEVIKEFGM-TIDKIFEVHGEKKFREVET 61
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVP 195
+V++++S + +V+ G G V + N+ LLR +G+ ++ P
Sbjct: 62 KVIERVSKLENVVISTGGGVVLNPENVKLLRENGVIYFLYAP 103
>gi|304394163|ref|ZP_07376086.1| shikimate kinase [Ahrensia sp. R2A130]
gi|303293603|gb|EFL87980.1| shikimate kinase [Ahrensia sp. R2A130]
Length = 205
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 82/171 (47%), Gaps = 9/171 (5%)
Query: 80 VKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAK 139
+ +++ I L G S+ LVG+ K+ +GK L+ L + D+D + E A G S
Sbjct: 14 IADRSSTIRRALGGRSIVLVGIMGVGKSTIGKRLSQYLDIEFVDADKEI-EKAAGMSVQD 72
Query: 140 AFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGA-VQSSANLALLRHGISLW----IDV 194
F + E+ ++ E +V+K+L G+ ++ G GA + + G+S+W ID+
Sbjct: 73 IFDQFGEEAFRTGEKKVIKRLMGEGQKILATGGGAFMNEDIRNDIAEGGVSVWLNADIDI 132
Query: 195 PPGMVARMDHSGFPESEVLPQ--LFALYKEMRDGYATADVTVSLQKVASQL 243
V R ++E P+ + A+ +E YA ADV + + V+ +
Sbjct: 133 LMKRVQRRSDRPLLKTED-PEATMRAMLEERNPIYALADVQIESRTVSRDV 182
>gi|262380437|ref|ZP_06073591.1| shikimate kinase [Acinetobacter radioresistens SH164]
gi|421855216|ref|ZP_16287596.1| shikimate kinase [Acinetobacter radioresistens DSM 6976 = NBRC
102413]
gi|262297883|gb|EEY85798.1| shikimate kinase [Acinetobacter radioresistens SH164]
gi|403189227|dbj|GAB73797.1| shikimate kinase [Acinetobacter radioresistens DSM 6976 = NBRC
102413]
Length = 183
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+++LVG A KT +G+ LA+ L + DSD E G + F + E G++ ET
Sbjct: 11 NIYLVGPMGAGKTTVGRHLAELLGREFLDSDH-ELERKTGANIPWIFEKEGEAGFRSRET 69
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVP 195
V+ QL+ +LV+ G GAV N L+ GI +++ P
Sbjct: 70 AVIDQLTLRQKLVLATGGGAVTQVPNREFLKQRGIVVYLYTP 111
>gi|159185832|ref|NP_356985.2| shikimate kinase [Agrobacterium fabrum str. C58]
gi|335033225|ref|ZP_08526594.1| shikimate kinase [Agrobacterium sp. ATCC 31749]
gi|159140966|gb|AAK89770.2| shikimate kinase [Agrobacterium fabrum str. C58]
gi|333795402|gb|EGL66730.1| shikimate kinase [Agrobacterium sp. ATCC 31749]
Length = 193
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 79/156 (50%), Gaps = 9/156 (5%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ VG+ A K+ +G+ +A L+ + D+D + E + ++ F E+ ++ ET
Sbjct: 24 NIVFVGLMGAGKSAVGRMVAQQLKVPFIDTD-VEIERVSRMTISELFATYGEEEFRALET 82
Query: 155 EVLKQLSSMGRLVVCAGNGA-VQSSANLALLRHGISLW----IDVPPGMVARMDHSGFPE 209
V+K+L G VV G GA + + + R GISLW ++V V + DH +
Sbjct: 83 RVIKRLMRGGPKVVSTGGGAFINDTTRGHIRRGGISLWLKADLEVLWERVNKRDHRPLLK 142
Query: 210 SEVLPQ--LFALYKEMRDGYATADVTVSLQKVASQL 243
+E P+ L AL ++ YA ADVT+ + V ++
Sbjct: 143 TEN-PKATLAALMEKRYPIYAEADVTIESRDVRKEI 177
>gi|78189187|ref|YP_379525.1| shikimate kinase [Chlorobium chlorochromatii CaD3]
gi|115312143|sp|Q3AR93.1|AROK_CHLCH RecName: Full=Shikimate kinase; Short=SK
gi|78171386|gb|ABB28482.1| shikimate kinase [Chlorobium chlorochromatii CaD3]
Length = 190
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 15/153 (9%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+FL G + + K+ +G LA++L Y + D D+L+ E G+S + F E+ E ++Q E +
Sbjct: 8 IFLTGFSGSGKSTIGPLLANSLGYEFVDLDALI-ERECGKSINQIFAEAGEAAFRQHEEQ 66
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVPPGMVARM------------ 202
L+ L + VV G G ++ L+R G +++ P +AR
Sbjct: 67 TLETLLMRRKTVVSLGGGVLEQPRAFELVRQAGTVVYLKSPVKTLARRLSNKTDRPLLKG 126
Query: 203 -DHSGFPESEVLPQLFALYKEMRDGYATADVTV 234
+ E+ ++ L Y AD+TV
Sbjct: 127 EQGEKLSQEEIEQKIAELLARREPRYECADITV 159
>gi|374336804|ref|YP_005093491.1| shikimate kinase I [Oceanimonas sp. GK1]
gi|372986491|gb|AEY02741.1| shikimate kinase I [Oceanimonas sp. GK1]
Length = 172
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 16/163 (9%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +GK+LA L ++DSD + E G + F E+G++Q E
Sbjct: 6 NIFLVGPMGAGKSTIGKYLAQQLHMEFYDSDHEI-ERRTGADISWVFDVEGEEGFRQREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVP-PGMVARMD--------H 204
+V+ +LS + +V+ G G+++S + L GI ++++ +AR+
Sbjct: 65 KVINELSELQGIVLATGGGSIKSRESRNRLSARGIVVYLETTVEKQLARVQKDKRRPLLQ 124
Query: 205 SGFPESEVLPQLF----ALYKEMRDGYATADVTVSLQKVASQL 243
+ P EVL +L LY+E+ D Y S + VA+Q+
Sbjct: 125 TEEPPREVLERLAHERNELYREVAD-YVVRTDEQSAKLVANQI 166
>gi|54401374|gb|AAV34468.1| predicted shikimate kinase [uncultured proteobacterium RedeBAC7D11]
Length = 167
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
VFLVG K+ G+ L++ L Y ++D+D L+ E A G+ F + E ++Q E+
Sbjct: 2 KVFLVGPMGTGKSTTGRNLSEKLDYDFYDTDKLI-EKAEGKKIKDIFEQDGEDYFRQKES 60
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGIS-LWIDVPP 196
+ L + ++ + V+ G G V+ N L H +++D P
Sbjct: 61 KALSETKTLEKAVIATGGGIVEREENRLFLEHEDKVIFLDSSP 103
>gi|187934749|ref|YP_001887324.1| shikimate kinase [Clostridium botulinum B str. Eklund 17B]
gi|226729122|sp|B2TQ47.1|AROK_CLOBB RecName: Full=Shikimate kinase; Short=SK
gi|187722902|gb|ACD24123.1| shikimate kinase [Clostridium botulinum B str. Eklund 17B]
Length = 165
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 69/140 (49%), Gaps = 5/140 (3%)
Query: 94 TSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAE 153
+FL+GM K+ +G+ +A L + D D + E ++ ++ F E E ++ E
Sbjct: 3 NKIFLIGMPGCGKSTIGEIIAKELMLKFIDMD-ICIEEKTSKTISELF-EQGEDYFRDIE 60
Query: 154 TEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVP-PGMVARMDHSGFP-ES 210
+E K++ +V+ G G V+ N+ L+ +G+ ++ID P +++ +D S P
Sbjct: 61 SETCKEIIKYDNVVIATGGGVVKKDINIETLKNNGLVIFIDRPVEKIISDIDVSRRPLLK 120
Query: 211 EVLPQLFALYKEMRDGYATA 230
++ LYKE D Y A
Sbjct: 121 NGKERIIGLYKERYDIYKKA 140
>gi|260890230|ref|ZP_05901493.1| shikimate kinase [Leptotrichia hofstadii F0254]
gi|260859850|gb|EEX74350.1| shikimate kinase [Leptotrichia hofstadii F0254]
Length = 165
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 72/143 (50%), Gaps = 3/143 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L+GM K+ +G +L+ + Y + D D E + + F E+ +++ ET
Sbjct: 3 NIVLIGMPACGKSTIGYWLSKKINYPFVDVDRY-LEEKENKIISDIFSNEGEEYFRELET 61
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMVARMDHSGFPESEVL 213
+ LK+LS +++ G GAV++ N+ +L+ +GI ++++ ++R +H P +
Sbjct: 62 KYLKELSEKEGIIISTGGGAVKNKENIDILKENGIIVFLNRTIDDISRENHRNRPLLQNP 121
Query: 214 PQLFALYKEMRDGYAT-ADVTVS 235
+ LY E Y AD+ +
Sbjct: 122 DNIRKLYDERIKLYRQYADIIIK 144
>gi|221639246|ref|YP_002525508.1| shikimate kinase [Rhodobacter sphaeroides KD131]
gi|221160027|gb|ACM01007.1| Shikimate kinase [Rhodobacter sphaeroides KD131]
Length = 181
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 2/99 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+V +VGM A KT +G LA L + DSD + E A + A+ F E +++ E+
Sbjct: 8 TVVMVGMMGAGKTAVGSALARGLNVPFLDSDEEI-ERAANRTIAEIFARDGEPFFREKES 66
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWI 192
+VL +L V+ G GA + N ++R G+S+W+
Sbjct: 67 QVLARLLRGSPCVLSTGGGAFMAEGNRRMIREQGVSVWL 105
>gi|77463392|ref|YP_352896.1| shikimate kinase [Rhodobacter sphaeroides 2.4.1]
gi|429206448|ref|ZP_19197714.1| Shikimate kinase I [Rhodobacter sp. AKP1]
gi|124053400|sp|Q3J2I9.1|AROK_RHOS4 RecName: Full=Shikimate kinase; Short=SK
gi|77387810|gb|ABA78995.1| shikimate kinase [Rhodobacter sphaeroides 2.4.1]
gi|428190489|gb|EKX59035.1| Shikimate kinase I [Rhodobacter sp. AKP1]
Length = 181
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 2/99 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+V +VGM A KT +G LA L + DSD + E A + A+ F E +++ E+
Sbjct: 8 TVVMVGMMGAGKTAVGSALARGLNVPFLDSDEEI-ERAANRTIAEIFARDGEPFFREKES 66
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWI 192
+VL +L V+ G GA + N ++R G+S+W+
Sbjct: 67 QVLARLLRGSPCVLSTGGGAFMAEGNRRMIREQGVSVWL 105
>gi|73542814|ref|YP_297334.1| shikimate kinase [Ralstonia eutropha JMP134]
gi|116257511|sp|Q46WJ3.1|AROK_RALEJ RecName: Full=Shikimate kinase; Short=SK
gi|72120227|gb|AAZ62490.1| shikimate kinase [Ralstonia eutropha JMP134]
Length = 192
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++F VG+ A KT +G+ +A L Y +FDSD EA G F E+G++ E
Sbjct: 7 NLFFVGLMGAGKTTVGRTVARRLHYPFFDSDH-ELEAHCGVRIPVIFEHEGEEGFRDREA 65
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPP 196
++++L+ +V+ G GAV N LL+ G +++ P
Sbjct: 66 AMIRELTGRSGIVLATGGGAVLRPENRELLKSRGTVVYLRASP 108
>gi|452126823|ref|ZP_21939406.1| shikimate kinase [Bordetella holmesii F627]
gi|452130196|ref|ZP_21942769.1| shikimate kinase [Bordetella holmesii H558]
gi|451921918|gb|EMD72063.1| shikimate kinase [Bordetella holmesii F627]
gi|451923056|gb|EMD73200.1| shikimate kinase [Bordetella holmesii H558]
Length = 211
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 59/123 (47%), Gaps = 6/123 (4%)
Query: 75 DPSFAVKKKAADISTEL----KGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFE 130
DPS A + A + L +FLVGM A KT +G+ LA AL + D D E
Sbjct: 17 DPSAAPEAAAGECIEPLAQLPHDLPIFLVGMMGAGKTTIGRGLARALGREFIDLDH-ELE 75
Query: 131 AAGGESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GIS 189
A G F E G+++ E+ L++ + +++ G GAV + N LLR GI
Sbjct: 76 ARCGVRVPVIFEIEGEAGFRKRESSALQECTQRRAIILATGGGAVLAEDNRRLLRQRGIV 135
Query: 190 LWI 192
+++
Sbjct: 136 MYL 138
>gi|373457548|ref|ZP_09549315.1| Shikimate kinase [Caldithrix abyssi DSM 13497]
gi|371719212|gb|EHO40983.1| Shikimate kinase [Caldithrix abyssi DSM 13497]
Length = 186
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 62/118 (52%), Gaps = 4/118 (3%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
+K ++L G A K+ +G+ LAD L + D+D + E G++ + F E E ++
Sbjct: 1 MKKRHIYLTGFMGAGKSRIGRHLADLLNLPFVDTDQEI-EKMVGKTVRRIFEEEGEAFFR 59
Query: 151 QAETEVLKQLSSM-GRLVVCAGNGAVQSSANLA-LLRHGISLWID-VPPGMVARMDHS 205
+ E E+++Q+S VV G GA+ S +L + R GI +++ P + R+ HS
Sbjct: 60 KQEAEIVRQVSQHPAPRVVALGGGALNDSRSLENIHRSGIVIYLKSAPEAIFKRVAHS 117
>gi|332558270|ref|ZP_08412592.1| shikimate kinase [Rhodobacter sphaeroides WS8N]
gi|332275982|gb|EGJ21297.1| shikimate kinase [Rhodobacter sphaeroides WS8N]
Length = 180
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 2/99 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+V +VGM A KT +G LA L + DSD + E A + A+ F E +++ E+
Sbjct: 7 TVVMVGMMGAGKTAVGSALARGLNVPFLDSDEEI-ERAANRTIAEIFARDGEPFFREKES 65
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWI 192
+VL +L V+ G GA + N ++R G+S+W+
Sbjct: 66 QVLARLLRGSPCVLSTGGGAFMAEGNRRMIREQGVSVWL 104
>gi|444921588|ref|ZP_21241423.1| Shikimate kinase [Wohlfahrtiimonas chitiniclastica SH04]
gi|444507315|gb|ELV07492.1| Shikimate kinase [Wohlfahrtiimonas chitiniclastica SH04]
Length = 188
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
Query: 94 TSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAE 153
S FLVG KT +G+ LA+ L + + DSD+ + E G+S A F E ++ E
Sbjct: 5 NSFFLVGPMGVGKTTVGQALAEQLGFSFIDSDAYI-ENQAGQSIADLFATQGEVAFRDLE 63
Query: 154 TEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMV 199
T+ + LS + +V+ G GA+ N L+ G +++D+ P +
Sbjct: 64 TKAIDALSLLPNIVLSTGGGAILRDVNRDYLKSRGTVIFLDLAPSAI 110
>gi|119356668|ref|YP_911312.1| shikimate kinase [Chlorobium phaeobacteroides DSM 266]
gi|166988275|sp|A1BER1.1|AROK_CHLPD RecName: Full=Shikimate kinase; Short=SK
gi|119354017|gb|ABL64888.1| shikimate kinase [Chlorobium phaeobacteroides DSM 266]
Length = 190
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+FL G + + K+ +G LA++L Y + D D + EA G+S ++ F E E +++ E +
Sbjct: 7 IFLTGFSGSGKSTIGPLLANSLGYDFIDLDQAI-EAITGKSVSRIFAEEGESYFRKLELD 65
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVPPG-MVARMDH 204
LK +++ L+V G GA++S+ L++ G +++ G + R+ H
Sbjct: 66 TLKTVTNREELIVSLGGGALESNECYTLIKEKGTLVYLKSGSGTLTKRLCH 116
>gi|268318032|ref|YP_003291751.1| shikimate kinase [Rhodothermus marinus DSM 4252]
gi|262335566|gb|ACY49363.1| Shikimate kinase [Rhodothermus marinus DSM 4252]
Length = 192
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 57/109 (52%), Gaps = 2/109 (1%)
Query: 94 TSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAE 153
T ++L G K+ +G LA L Y + D D+L+ AG S + F E E ++ E
Sbjct: 9 TRIYLTGFMGCGKSTIGPLLARRLGYTFLDLDALIVRQAG-RSIPEIFAEGGEAAFRALE 67
Query: 154 TEVLKQLSSMGRLVVCAGNGAVQSSANLAL-LRHGISLWIDVPPGMVAR 201
+ L++ +++ V+ G GA+ S NLA LR+G +++ V +AR
Sbjct: 68 RDALRRTAALDAYVIATGGGALVSDDNLAWALRNGRVVYLQVSADELAR 116
>gi|320093587|ref|ZP_08025476.1| 3-dehydroquinate synthase [Actinomyces sp. oral taxon 178 str.
F0338]
gi|319979458|gb|EFW10931.1| 3-dehydroquinate synthase [Actinomyces sp. oral taxon 178 str.
F0338]
Length = 528
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
V LVGM A K+H+G+ LA AL + D+D+L+ E G +A F E E +++ E
Sbjct: 5 VVLVGMPGAGKSHVGRGLAGALGVPHVDTDALIEEEEGAAVSA-IFAEQGEVAFREKEAR 63
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLRHGIS-LWIDV 194
+++ M R VV G GAV ++ LLR G+S + IDV
Sbjct: 64 AVERALGM-RAVVSLGGGAVATARVRELLR-GVSVVHIDV 101
>gi|254293150|ref|YP_003059173.1| shikimate kinase [Hirschia baltica ATCC 49814]
gi|254041681|gb|ACT58476.1| Shikimate kinase [Hirschia baltica ATCC 49814]
Length = 191
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 75/150 (50%), Gaps = 13/150 (8%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ LVG+ A K+ +G+ LA L+ +FDSD V E A + + F + E+ +++ E
Sbjct: 27 TIVLVGIMGAGKSSVGRRLAQELKIPFFDSDDEV-EKAASMTIPEIFSKHGEEEFRRVEA 85
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALL-RHGISLWIDVPPGMVARM--DHSGFP--- 208
V+++L R+++ G GA + A ++ ++ I++W++ + R G P
Sbjct: 86 RVIERLLEEPRMILATGGGAFMNEATREIMQKNAITVWLNADLETLWRRVSKKGGRPLLK 145
Query: 209 ---ESEVLPQLFALYKEMRDGYATADVTVS 235
+VL L L K + YA AD V+
Sbjct: 146 KENPKQVLADLLTLRKPI---YALADYEVA 172
>gi|427431003|ref|ZP_18920699.1| Shikimate kinase I [Caenispirillum salinarum AK4]
gi|425878180|gb|EKV26899.1| Shikimate kinase I [Caenispirillum salinarum AK4]
Length = 200
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 71/150 (47%), Gaps = 15/150 (10%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+V LVG+ A K+ +GK LA L + D+D V E A G+S A F E +++ E
Sbjct: 19 TVVLVGLMGAGKSVVGKRLAQRLHVPFIDADHEV-EKAAGQSIADIFATLGEDAFREGER 77
Query: 155 EVLKQLSSMGRLVVCAGNGAVQS-SANLALLRHGISLWIDVPPGMVAR---------MDH 204
+V+ +L V+ AG GA + R GIS+W+ ++ R + +
Sbjct: 78 KVMARLLDGPVCVLAAGGGAFMCPETRRRVKRRGISVWLRADLDLLVRRTAGRGHRPLLN 137
Query: 205 SGFPESEVLPQLFALYKEMRDGYATADVTV 234
G P + +L +L + Y TADVTV
Sbjct: 138 QGDPRA----KLESLMAQRYPVYETADVTV 163
>gi|288573792|ref|ZP_06392149.1| 3-dehydroquinate synthase [Dethiosulfovibrio peptidovorans DSM
11002]
gi|288569533|gb|EFC91090.1| 3-dehydroquinate synthase [Dethiosulfovibrio peptidovorans DSM
11002]
Length = 520
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 92 KGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQ 151
+G VFL G + KT +G+ LA+A+ + D D + E G S A+ F E+G+++
Sbjct: 3 RGELVFLGGFMGSGKTSVGQRLAEAVGLPFVDLDKAI-ELRAGASVAEIFASQGEEGFRR 61
Query: 152 AETEVLKQLSSMGRLVVCAGNGAVQSSANLALLR 185
E + L+++S + R +V G GA++ L+R
Sbjct: 62 LEAQSLREISDLERCIVALGGGALKDPKGRELIR 95
>gi|126462247|ref|YP_001043361.1| shikimate kinase [Rhodobacter sphaeroides ATCC 17029]
gi|126103911|gb|ABN76589.1| shikimate kinase [Rhodobacter sphaeroides ATCC 17029]
Length = 193
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 3/113 (2%)
Query: 81 KKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKA 140
++ + LK T V +VGM A KT +G LA L + DSD + E A + A+
Sbjct: 7 REDGRQVMARLKKT-VVMVGMMGAGKTAVGSALARGLNVPFLDSDEEI-ERAANRTIAEI 64
Query: 141 FRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWI 192
F E +++ E++VL +L V+ G GA + N ++R G+S+W+
Sbjct: 65 FARDGEPFFREKESQVLARLLRGSPCVLSTGGGAFMAEGNRRMIREQGVSVWL 117
>gi|153953427|ref|YP_001394192.1| hypothetical protein CKL_0791 [Clostridium kluyveri DSM 555]
gi|219854051|ref|YP_002471173.1| hypothetical protein CKR_0708 [Clostridium kluyveri NBRC 12016]
gi|146346308|gb|EDK32844.1| AroK [Clostridium kluyveri DSM 555]
gi|219567775|dbj|BAH05759.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 169
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 65/116 (56%), Gaps = 4/116 (3%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ ++GM KT +GK ++ L + D D + + AG + + F++ +E ++ E+
Sbjct: 7 NIVIIGMPGCGKTTIGKMISSKLNKRFVDLDDYIVDKAGC-TIPEIFQKGEEH-FRNIES 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLA-LLRHGISLWIDVP-PGMVARMDHSGFP 208
E ++++S G +V+ G G +++ N+ L ++GI ++D P +V+ +D S P
Sbjct: 65 EAVEEVSIEGSMVISTGGGVIKNQKNIVNLKKNGIIFFVDRPLENIVSDVDISTRP 120
>gi|422873292|ref|ZP_16919777.1| shikimate kinase [Clostridium perfringens F262]
gi|380305677|gb|EIA17954.1| shikimate kinase [Clostridium perfringens F262]
Length = 167
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 80/170 (47%), Gaps = 18/170 (10%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
+K V L+GM + KT +G+ L+ L+ + D D + + G E K +E+ ++
Sbjct: 1 MKKRGVLLIGMPGSGKTTIGRELSKVLKMNFLDMDEFIERSTGKE--IKELFAQEEEVFR 58
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVAR-MDHSGFP- 208
E++ + LS++ +V+ +G G V N+ + I+++I+ P ++ +D G P
Sbjct: 59 DLESKSCELLSTLKNVVISSGGGIVTREENMGNFKEFITVFINRPLDLIMEDIDTEGRPL 118
Query: 209 ---ESEVLPQLFA----LYKE------MRDGYATADVTVSLQKVASQLGY 245
E L L+ LYK+ + DG T + + K S+L Y
Sbjct: 119 LWDGKERLTNLYRDRIDLYKKHSDIEIINDG-TTKEAIREIVKAISELSY 167
>gi|344996380|ref|YP_004798723.1| shikimate kinase [Caldicellulosiruptor lactoaceticus 6A]
gi|343964599|gb|AEM73746.1| Shikimate kinase [Caldicellulosiruptor lactoaceticus 6A]
Length = 172
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L G + KT +GK +A+ L D+DS V + G + K F EK +++ ET
Sbjct: 3 NIVLTGFMGSGKTTIGKLIAEKLDIELIDTDSEVIKEFGM-TIDKIFEVHGEKKFREVET 61
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLW 191
+V++++S + +V+ G G V + N+ LLR ++
Sbjct: 62 KVIERVSKLENVVISTGGGVVLNPENVKLLRENSVIY 98
>gi|295093407|emb|CBK82498.1| shikimate dehydrogenase [Coprococcus sp. ART55/1]
Length = 461
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 3/109 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+V L+G KT +G+ LA L + D DS + + AG S + F + E+ ++Q ET
Sbjct: 293 NVILIGFMGCGKTTVGEALARKLNFDLLDVDSYIEDKAGC-SIKQIFADKGEEYFRQLET 351
Query: 155 EVLKQLSS-MGRLVVCAGNGAVQSSANL-ALLRHGISLWIDVPPGMVAR 201
+ LK+L+S + V+ G G AN+ L R G +++DV P V R
Sbjct: 352 DTLKELNSRLSHTVISTGGGLPMRQANVDELRRMGRIIYLDVKPEEVVR 400
>gi|187476587|ref|YP_784611.1| shikimate kinase [Bordetella avium 197N]
gi|114151679|sp|Q2L1Z2.1|AROK_BORA1 RecName: Full=Shikimate kinase; Short=SK
gi|115421173|emb|CAJ47661.1| shikimate kinase I [Bordetella avium 197N]
Length = 209
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+FLVGM A KT +G+ LA AL + D D EA G F E G+++ E+
Sbjct: 40 IFLVGMMGAGKTTIGRGLARALGREFIDLDH-ELEARCGVRVPVIFEIEGEAGFRKREST 98
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWI 192
L++ + +++ G GAV + N LLR GI L++
Sbjct: 99 ALQECTQRRGIILATGGGAVLAEENRRLLRERGIVLYL 136
>gi|312793894|ref|YP_004026817.1| shikimate kinase [Caldicellulosiruptor kristjanssonii 177R1B]
gi|312181034|gb|ADQ41204.1| Shikimate kinase [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 172
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L G + KT +GK +A+ L D+DS V + G + K F EK +++ ET
Sbjct: 3 NIVLTGFMGSGKTTIGKLIAEKLDIELIDTDSEVIKEFGM-TIDKIFEVHGEKKFREVET 61
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRHG 187
+V++++S + +V+ G G V + N+ LLR
Sbjct: 62 KVIERVSKLENVVISTGGGVVLNPENVKLLREN 94
>gi|257437498|ref|ZP_05613253.1| shikimate dehydrogenase [Faecalibacterium prausnitzii A2-165]
gi|257200066|gb|EEU98350.1| shikimate kinase [Faecalibacterium prausnitzii A2-165]
Length = 420
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 4/114 (3%)
Query: 85 ADISTELKGT--SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFR 142
A +++EL+ ++ L+GM ++ K+ LG+ LA+ L + D D + +A G S F
Sbjct: 247 ARVTSELRREQLNIALIGMPSSGKSTLGRALAERLGKRFVDLDEEIVKA-DGRSIPDIFA 305
Query: 143 ESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANL-ALLRHGISLWIDVP 195
E G+++ E + + R V+ G G V+ ANL AL +GI L+ID P
Sbjct: 306 AEGEAGFRKLEAAQTARFARENRQVISCGGGVVKDPANLRALHANGIVLFIDRP 359
>gi|374572209|ref|ZP_09645305.1| shikimate kinase [Bradyrhizobium sp. WSM471]
gi|374420530|gb|EHR00063.1| shikimate kinase [Bradyrhizobium sp. WSM471]
Length = 207
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 2/109 (1%)
Query: 85 ADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRES 144
ADI + L S+ LVGM K+ +G+ +A L+ + D+D+ + EAA G + + F
Sbjct: 14 ADILSALGTRSIVLVGMMGVGKSTIGRRMALRLKLPFVDADTEI-EAAAGMTIPEIFERH 72
Query: 145 DEKGYQQAETEVLKQLSSMGRLVVCAGNGA-VQSSANLALLRHGISLWI 192
E ++ E V+ +L G +V+ G GA ++ ++ IS+W+
Sbjct: 73 GEPHFRDGEARVIARLLDGGPIVLATGGGAFMREETRGRIVAKAISIWL 121
>gi|406943330|gb|EKD75351.1| shikimate kinase I protein [uncultured bacterium]
Length = 170
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
S+FL+G K+ +GK LA L+ +FDSD + AG + F E G++ E
Sbjct: 5 SIFLIGPMGVGKSTIGKQLAKELKLEFFDSDQEIERRAGAD-IPWIFDVEGEAGFRSREE 63
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALL 184
V+ +L+ +V+ G GAV+S+ N A+L
Sbjct: 64 RVIDELTIHPNIVLATGGGAVESAKNRAIL 93
>gi|398826693|ref|ZP_10584930.1| shikimate kinase [Bradyrhizobium sp. YR681]
gi|398220638|gb|EJN07081.1| shikimate kinase [Bradyrhizobium sp. YR681]
Length = 208
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
Query: 85 ADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRES 144
ADI + L S+ LVGM K+ +G+ +A L+ + D+D+ + EAA G + + F
Sbjct: 14 ADILSALGARSIVLVGMMGVGKSTIGRRMAARLKLPFVDADTEI-EAAAGMTIPEIFERH 72
Query: 145 DEKGYQQAETEVLKQLSSMGRLVVCAGNGA-VQSSANLALLRHGISLWI 192
E ++ E V+ +L G +V+ G GA ++ + IS+W+
Sbjct: 73 GEAHFRDGEARVIARLLDGGPVVLATGGGAFMREETRHRIAAKAISIWL 121
>gi|223935876|ref|ZP_03627791.1| Shikimate kinase [bacterium Ellin514]
gi|223895477|gb|EEF61923.1| Shikimate kinase [bacterium Ellin514]
Length = 179
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 59/108 (54%), Gaps = 8/108 (7%)
Query: 91 LKGTSVF----LVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDE 146
+ GT F L+G K+ +G +AD LR+ + D+D L+ E+ G+S + F E E
Sbjct: 1 MSGTRQFHNIALIGFMGTGKSSVGHIVADQLRFSFLDTDELI-ESRRGKSISAIFSEEGE 59
Query: 147 KGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRH---GISLW 191
+++ E +++ +L+S + V+ G G ++AN+A L+ + LW
Sbjct: 60 PAFREYERDLVLELASRNKTVISTGGGLGANTANVASLKEYSFVVCLW 107
>gi|404495838|ref|YP_006719944.1| shikimate kinase [Geobacter metallireducens GS-15]
gi|418067761|ref|ZP_12705095.1| Shikimate kinase [Geobacter metallireducens RCH3]
gi|373558265|gb|EHP84617.1| Shikimate kinase [Geobacter metallireducens RCH3]
gi|403378002|gb|ABB31219.2| shikimate kinase [Geobacter metallireducens GS-15]
Length = 179
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+V L G K+ +G+ LA L + Y D D+L+ E G S + F E ++ ET
Sbjct: 14 NVILTGFMGTGKSSVGRLLAHRLGFRYCDLDALIVEGEG-VSINEIFARHGEPHFRALET 72
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR 185
E ++ +S R VV G GAV S N LLR
Sbjct: 73 EAVRSVSREERCVVSTGGGAVISPENRCLLR 103
>gi|422009867|ref|ZP_16356849.1| shikimate kinase [Providencia rettgeri Dmel1]
gi|414092040|gb|EKT53719.1| shikimate kinase [Providencia rettgeri Dmel1]
Length = 165
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 97 FLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEV 156
+++G + KT +GK A++ Y + D+D LV E A G+S A+ + ++Q ET+V
Sbjct: 3 YIIGPRGSGKTTIGKKFAESKGYQFVDTDKLVLEKA-GKSIAEIVEQHGWDYFRQLETDV 61
Query: 157 LKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMVAR 201
LK + ++V G G V + N ++R +G ++++ P ++A+
Sbjct: 62 LKSIKQ-NNMIVSTGGGLVLAEENQQIMRNNGTVIYLNTHPEVLAK 106
>gi|407975243|ref|ZP_11156149.1| shikimate kinase [Nitratireductor indicus C115]
gi|407429328|gb|EKF42006.1| shikimate kinase [Nitratireductor indicus C115]
Length = 207
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 58/116 (50%), Gaps = 4/116 (3%)
Query: 83 KAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFR 142
K A I+ +L S+ VG+ A KT +G+ +A+ L + DSD + E + A F
Sbjct: 11 KFAGIAQKLGNRSIVFVGLMGAGKTVIGRKVAEMLGLAFIDSDHEI-ETVSRMTVADLFS 69
Query: 143 ESDEKGYQQAETEVLKQLSSMGRLVVCAGNGA-VQSSANLALLRHGISLWI--DVP 195
E ++ E V+ +L G VV G GA V + A+ R GIS+W+ D+P
Sbjct: 70 SYGEAEFRSLERRVIARLLKSGPRVVSTGGGAFVNAQTRRAVARRGISIWLKADLP 125
>gi|261416629|ref|YP_003250312.1| 3-dehydroquinate synthase [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|385791476|ref|YP_005822599.1| shikimate kinase [Fibrobacter succinogenes subsp. succinogenes S85]
gi|261373085|gb|ACX75830.1| 3-dehydroquinate synthase [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302325829|gb|ADL25030.1| shikimate kinase/3-dehydroquinate synthase [Fibrobacter
succinogenes subsp. succinogenes S85]
Length = 540
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 75/150 (50%), Gaps = 13/150 (8%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
++ G + K+ G+ LAD L + D+D+++ E A G+S ++ F + E +++ E +
Sbjct: 5 LYFTGFMASGKSRTGRALADRLGRPFVDTDNVIVERA-GKSISEIFEQEGEAAFRKMERD 63
Query: 156 VLKQLSSMGR-LVVCAGNGAVQSSANLALLRHG---ISLWIDVPPGMVARMDH------- 204
V+ +++ + LVV G GA+ + NL ++R I LW P + R+
Sbjct: 64 VIAEIAQSEKPLVVSLGGGALTQAENLKVIRENGTIIRLWAK-PEVLSERIGRKNTRPLL 122
Query: 205 SGFPESEVLPQLFALYKEMRDGYATADVTV 234
+ + E L ++ + K+ YA AD +V
Sbjct: 123 ANLSDEERLEKIKQMLKDREKNYANADFSV 152
>gi|357385939|ref|YP_004900663.1| shikimate kinase [Pelagibacterium halotolerans B2]
gi|351594576|gb|AEQ52913.1| Shikimate kinase I [Pelagibacterium halotolerans B2]
Length = 197
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 2/117 (1%)
Query: 77 SFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGES 136
A K + + L G V LVGM A KT +G+ LA+ L + DSD+ + E A G S
Sbjct: 7 GIAKPKAESQVLDALAGRPVVLVGMMGAGKTTVGRRLANRLGLPFTDSDAEI-ETAAGMS 65
Query: 137 AAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGA-VQSSANLALLRHGISLWI 192
F E ++ E V+ +L + ++ G GA + A+ H +S+WI
Sbjct: 66 IPDIFAAHGEPEFRAGEARVISRLLREHQGIIATGGGAFINPETRDAIKTHAVSIWI 122
>gi|328541969|ref|YP_004302078.1| shikimate kinase [Polymorphum gilvum SL003B-26A1]
gi|326411719|gb|ADZ68782.1| Shikimate kinase, 3-dehydroquinate synthase [Polymorphum gilvum
SL003B-26A1]
Length = 209
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 59/112 (52%), Gaps = 2/112 (1%)
Query: 82 KKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAF 141
K+AA + L S+ LVG+ K+ +G+ LA L + D+D+ + E A + ++ F
Sbjct: 13 KRAARLVEALGTRSIVLVGIMGCGKSSVGRRLAQRLAIPFVDADAEI-ETAANMTVSEIF 71
Query: 142 RESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSA-NLALLRHGISLWI 192
E +++ E +V+ +L G V+ G GA S A A+ R G+S+W+
Sbjct: 72 AVHGETEFRRGEEKVIARLLRNGPQVLATGGGAYMSDATRAAIARRGVSVWL 123
>gi|290476272|ref|YP_003469176.1| shikimate kinase [Xenorhabdus bovienii SS-2004]
gi|289175609|emb|CBJ82412.1| shikimate kinase II [Xenorhabdus bovienii SS-2004]
Length = 174
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 68/124 (54%), Gaps = 6/124 (4%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++F+VG A KT +GK LA+AL Y + D+D + +A G + A + +++ E+
Sbjct: 4 TLFIVGARGAGKTTIGKLLAEALSYTFIDTDESI-QAFCGMTIADLVEQYGWTHFRELES 62
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALL-RHGISLWIDVPPG-MVARMDHSGFPESEV 212
++LK +S + V+ G G + SS N + ++GI +++ P ++ R+ + PE+
Sbjct: 63 QILKN-ASQNKCVISTGGGMILSSENRQYMQQNGIVVYLQAPAEVLIKRLSLN--PENTQ 119
Query: 213 LPQL 216
P L
Sbjct: 120 RPSL 123
>gi|322834101|ref|YP_004214128.1| shikimate kinase [Rahnella sp. Y9602]
gi|384259278|ref|YP_005403212.1| shikimate kinase [Rahnella aquatilis HX2]
gi|321169302|gb|ADW75001.1| Shikimate kinase [Rahnella sp. Y9602]
gi|380755254|gb|AFE59645.1| shikimate kinase II [Rahnella aquatilis HX2]
Length = 174
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 68/144 (47%), Gaps = 18/144 (12%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++F+VG A KT +G LA AL Y + D+D L A G S A +G+++ ET
Sbjct: 4 TIFMVGARGAGKTTVGSALAKALGYKFVDTD-LALLCASGLSVADIVEREGWEGFRRRET 62
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALL-RHGISLWIDVPPGMVA-----------RM 202
E LK +SS VV G G V S N + +G +++ P +A R
Sbjct: 63 ETLKAISS-PLTVVATGGGVVLSQENRDFMGENGTVIYLRSPASTLANRLEDAPLEDQRP 121
Query: 203 DHSGFP----ESEVLPQLFALYKE 222
+G P +EVL + ALY+E
Sbjct: 122 TLTGKPIAEEMTEVLNEREALYQE 145
>gi|429092509|ref|ZP_19155137.1| Shikimate kinase III [Cronobacter dublinensis 1210]
gi|426742708|emb|CCJ81250.1| Shikimate kinase III [Cronobacter dublinensis 1210]
Length = 174
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 4/122 (3%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
++L+G KT G+ LA AL Y + D+D +FE + A+ + G++ E+E
Sbjct: 5 IYLIGARGCGKTTTGEALARALGYGFADTDRWLFEQT-QMTVAEVVEKEGWPGFRDRESE 63
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMVARMDHSGFPESEVLP 214
L Q ++ VV G G V N +R HG+ ++++VP ++A+ + FPE P
Sbjct: 64 AL-QAVTLPATVVATGGGMVLRDGNREFMRQHGVVIYLNVPVAVLAQRLEA-FPEEGQRP 121
Query: 215 QL 216
L
Sbjct: 122 TL 123
>gi|329894544|ref|ZP_08270352.1| Shikimate kinase I [gamma proteobacterium IMCC3088]
gi|328922982|gb|EGG30308.1| Shikimate kinase I [gamma proteobacterium IMCC3088]
Length = 170
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+ LVG A KT +G LA LR + DSD+ + EA G F E+G++ ET+
Sbjct: 4 IVLVGPMGAGKTTVGTLLAKKLRLPFKDSDAEI-EARTGADIPWIFDVEGEQGFRDRETQ 62
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLR 185
VLK L +M V+ G G V N LL+
Sbjct: 63 VLKDLLAMPEGVIATGGGIVMREENRVLLK 92
>gi|358448500|ref|ZP_09159003.1| shikimate kinase [Marinobacter manganoxydans MnI7-9]
gi|385330220|ref|YP_005884171.1| shikimate kinase I [Marinobacter adhaerens HP15]
gi|311693370|gb|ADP96243.1| shikimate kinase I [Marinobacter adhaerens HP15]
gi|357227288|gb|EHJ05750.1| shikimate kinase [Marinobacter manganoxydans MnI7-9]
Length = 188
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
V LVG A K+ +G+ LA L Y + DSD ++ E G + F E G++ ET
Sbjct: 7 VVLVGPMGAGKSTIGRMLAKELGYRFLDSDRIIEERCGA-NIPWIFDVEGEDGFRLRETA 65
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLRH 186
+L +LS R V+ G GAV N +L+
Sbjct: 66 MLDELSHEDRTVLATGGGAVMRQENHPILKR 96
>gi|357052554|ref|ZP_09113660.1| hypothetical protein HMPREF9467_00632 [Clostridium clostridioforme
2_1_49FAA]
gi|355386560|gb|EHG33598.1| hypothetical protein HMPREF9467_00632 [Clostridium clostridioforme
2_1_49FAA]
Length = 469
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 69/137 (50%), Gaps = 9/137 (6%)
Query: 62 DTTSNTVTKVAAEDPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYY 121
D+ + K ED + ++K+A E +G ++ L+G A KT +G+ A R
Sbjct: 272 DSGTIKAAKQMIED--YLIRKQAG----EGRGENLILIGFMGAGKTSVGEHFAARYRMPM 325
Query: 122 FDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEVL-KQLSSMGRLVVCAGNGAVQSSAN 180
D+D + EAA G + + F E+ +++ ET VL K L GR V+ G G + N
Sbjct: 326 IDTDKEI-EAAAGMAISDIFATRGEEAFRRLETGVLEKLLKQGGRSVISVGGGLPLRAEN 384
Query: 181 LALLRH-GISLWIDVPP 196
ALL+ G +++DV P
Sbjct: 385 RALLKQLGTVVYLDVLP 401
>gi|445494483|ref|ZP_21461527.1| bifunctional shikimate kinase/3-dehydroquinate synthase
[Janthinobacterium sp. HH01]
gi|444790644|gb|ELX12191.1| bifunctional shikimate kinase/3-dehydroquinate synthase
[Janthinobacterium sp. HH01]
Length = 547
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+VFLVG+ A KT +G+ LA L + DSD + EA G S F E+ +++ E
Sbjct: 3 NVFLVGLMGAGKTTIGRILARKLGSRFIDSDHEI-EARTGASIPWIFEIEGEQSFRRREA 61
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR 185
+V+++L+S LV+ G GA+ ++ + A L+
Sbjct: 62 DVIRELTSQQDLVLATGGGAILNADSRAYLQ 92
>gi|433654887|ref|YP_007298595.1| shikimate kinase [Thermoanaerobacterium thermosaccharolyticum
M0795]
gi|433293076|gb|AGB18898.1| shikimate kinase [Thermoanaerobacterium thermosaccharolyticum
M0795]
Length = 171
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 78/166 (46%), Gaps = 11/166 (6%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L G K+ +GK +AD L + Y D+D L+ E G + F + EK ++ E
Sbjct: 3 NIALTGFMATGKSVVGKKVADILSFGYIDTDCLI-EKICGMKIPEIFDKYGEKYFRGLEK 61
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMVARM--DHSGFP--- 208
+K+ S + V+ G G V + +N+ LR HG+ + + P ++ R D P
Sbjct: 62 VAVKRASRLKNHVISTGGGVVLNPSNIVQLRKHGVVICLKARPEIILRNVGDADSRPILA 121
Query: 209 ESEVLPQLFALYKEMRDGYATADVTVSLQKVASQLGYDDLDAVTTE 254
+V ++ L E + Y AD T+ + S++G +D+ E
Sbjct: 122 TDDVYGRIKMLLDERQHFYEFADYTIDI----SEMGINDVALAVVE 163
>gi|110598517|ref|ZP_01386787.1| Shikimate kinase [Chlorobium ferrooxidans DSM 13031]
gi|110339890|gb|EAT58395.1| Shikimate kinase [Chlorobium ferrooxidans DSM 13031]
Length = 253
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 60/109 (55%), Gaps = 2/109 (1%)
Query: 94 TSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAE 153
T +FL G + + K+ +G LA++L Y + D D + E G++ + F E E +++ E
Sbjct: 68 TLIFLTGFSGSGKSTIGPLLANSLGYEFVDLDQTI-EKRAGKAITRIFAEEGEACFRELE 126
Query: 154 TEVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVPPGMVAR 201
+ L+++ + LV+ G G +++ + AL+R G +++ P +AR
Sbjct: 127 LQALQEVVNRTNLVISLGGGVLENERSWALVRESGTLVYLKSSPKTLAR 175
>gi|319944754|ref|ZP_08019018.1| shikimate kinase [Lautropia mirabilis ATCC 51599]
gi|319742003|gb|EFV94426.1| shikimate kinase [Lautropia mirabilis ATCC 51599]
Length = 181
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
S+FLVGM A K+ +G LA L + D+D E G S F E+G+++ ET
Sbjct: 6 SIFLVGMMGAGKSTVGVRLARRLGRAFIDADR-ELEERLGVSIPTIFELEGEEGFRRRET 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALL 184
++L +LS+ LV+ G GAV S N +L
Sbjct: 65 QLLDELSARDGLVLATGGGAVLSPVNRDML 94
>gi|91785420|ref|YP_560626.1| shikimate kinase [Burkholderia xenovorans LB400]
gi|91689374|gb|ABE32574.1| shikimate kinase [Burkholderia xenovorans LB400]
Length = 183
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+VF VG+ A KT +G+ +A L +FDSD + EA G F E G+++ E
Sbjct: 9 NVFFVGLMGAGKTTVGRAIARRLDRPFFDSDHEI-EARTGARIPVIFELEGEAGFREREA 67
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVPP 196
V+ +L++ +V+ G GAV N LR+ G+ +++ P
Sbjct: 68 NVISELTARENIVLATGGGAVLRPENREALRNRGVVIYLRANP 110
>gi|254452698|ref|ZP_05066135.1| shikimate kinase [Octadecabacter arcticus 238]
gi|198267104|gb|EDY91374.1| shikimate kinase [Octadecabacter arcticus 238]
Length = 171
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
Query: 99 VGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEVLK 158
+GM + KT +G+ +A L Y DSD+ + EAA + A+ F S E ++ E EV+
Sbjct: 1 MGMMGSGKTAIGRAMAMKLGVPYVDSDAEI-EAAANATIAEIFARSGEPFFRNREAEVIA 59
Query: 159 QLSSMGRLVVCAGNGAVQSSANLALL-RHGISLWID 193
+L V+ G GA + N A + +HG+++W+D
Sbjct: 60 RLLQSDPCVLSTGGGAYLAERNRAAISKHGVAVWLD 95
>gi|262373635|ref|ZP_06066913.1| shikimate kinase [Acinetobacter junii SH205]
gi|262311388|gb|EEY92474.1| shikimate kinase [Acinetobacter junii SH205]
Length = 186
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+++LVG A KT +G+ LA+ L + DSD + E G + F + E G++ ET
Sbjct: 17 NIYLVGPMGAGKTTVGRHLAELLGRDFIDSDHEI-ERKTGATIPWIFEKEGEVGFRLRET 75
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALL-RHGISLWIDVP 195
VL L+S LV+ G GAV + N L + GI +++ P
Sbjct: 76 NVLNDLTSRSSLVLATGGGAVTQAENRQFLHQRGIVVYLYTP 117
>gi|110800453|ref|YP_695146.1| shikimate kinase [Clostridium perfringens ATCC 13124]
gi|422345138|ref|ZP_16426052.1| hypothetical protein HMPREF9476_00125 [Clostridium perfringens
WAL-14572]
gi|110675100|gb|ABG84087.1| shikimate kinase [Clostridium perfringens ATCC 13124]
gi|373227863|gb|EHP50173.1| hypothetical protein HMPREF9476_00125 [Clostridium perfringens
WAL-14572]
Length = 167
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
+K V L+GM A KT +G+ L+ L+ + D D + E + G+ + F + +E ++
Sbjct: 1 MKKRGVLLIGMPGAGKTTIGRDLSTVLKMNFLDMDEFI-ERSTGKEIKELFAQGEEV-FR 58
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVAR-MDHSGFP- 208
E++ + LS++ +V+ +G G V N+ + I+++I+ P ++ +D G P
Sbjct: 59 DLESKSCELLSTLKNVVISSGGGIVTREENMGNFKEFITVFINRPLDLIMEDIDTEGRPL 118
Query: 209 ---ESEVLPQLFA----LYKE------MRDGYATADVTVSLQKVASQLGY 245
E L L+ LYK+ + DG T + + K S+L Y
Sbjct: 119 LWDGKERLTNLYRDRIDLYKKHSDIEIINDG-TTKEAIREIVKAISELSY 167
>gi|78064966|ref|YP_367735.1| shikimate kinase [Burkholderia sp. 383]
gi|115312141|sp|Q39KC5.1|AROK_BURS3 RecName: Full=Shikimate kinase; Short=SK
gi|77965711|gb|ABB07091.1| shikimate kinase [Burkholderia sp. 383]
Length = 184
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+VF VG+ A KT +G+ +A L +FDSD + EA G F E G++ ET
Sbjct: 9 NVFFVGLMGAGKTTVGRAVARRLDRTFFDSDHEI-EARTGARIPVIFEMEGEAGFRDRET 67
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPP 196
+V+ L+ +V+ G GAV N L+ +GI +++ P
Sbjct: 68 QVITDLTQRENIVLATGGGAVLRPENRDCLKNNGIVVYLRANP 110
>gi|430762725|ref|YP_007218582.1| Shikimate kinase I [Thioalkalivibrio nitratireducens DSM 14787]
gi|430012349|gb|AGA35101.1| Shikimate kinase I [Thioalkalivibrio nitratireducens DSM 14787]
Length = 184
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 1/101 (0%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+V LVG A K+ + + LA L+ + D+D+ + E G F E+G++Q ET
Sbjct: 3 NVVLVGPMGAGKSTIARGLAAVLKRSFVDADAEI-ERRTGVDIPTIFEFEGEEGFRQRET 61
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVP 195
E+L++L +V+ G G V N LL+ L++ VP
Sbjct: 62 EMLRELLERENIVLATGGGVVMRPENRELLKQHCVLYLRVP 102
>gi|381204727|ref|ZP_09911798.1| shikimate kinase [SAR324 cluster bacterium JCVI-SC AAA005]
Length = 164
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 73/149 (48%), Gaps = 7/149 (4%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L+G A KT +G+ LA+ L Y++ D+D + E G + + FR + E ++ ET
Sbjct: 2 NIILIGFMGAGKTTVGRKLANRLGYFFLDTDQQI-EKQQGCTIEEIFRYAGEATFRDLET 60
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVPPGMVAR-----MDHSGFP 208
++L+ L S+ ++ G G S N LL+ G ++++ V G + + ++
Sbjct: 61 KLLENLQSVRNTILSTGGGMFIRSKNQELLKDIGKTVYLQVDRGTLEQRLQCDLNRPLLQ 120
Query: 209 ESEVLPQLFALYKEMRDGYATADVTVSLQ 237
+ + + + Y TAD+T+ Q
Sbjct: 121 QPNWQKNVNQMLQHREPIYLTADLTIKAQ 149
>gi|254447343|ref|ZP_05060809.1| shikimate kinase [gamma proteobacterium HTCC5015]
gi|198262686|gb|EDY86965.1| shikimate kinase [gamma proteobacterium HTCC5015]
Length = 174
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
S+FLVG A KT +G+ LA L + DSD + E G + F E G++Q E
Sbjct: 4 SLFLVGPMGAGKTTIGRLLAKQLGLCFVDSDHAIEEKTG-VNIPTIFEYEGESGFRQREA 62
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALL 184
+++ +LS +V+ G GAV + N L
Sbjct: 63 QIIDELSQQKNIVLATGGGAVTTPQNCTHL 92
>gi|193212423|ref|YP_001998376.1| shikimate kinase [Chlorobaculum parvum NCIB 8327]
gi|238692631|sp|B3QMM3.1|AROK_CHLP8 RecName: Full=Shikimate kinase; Short=SK
gi|193085900|gb|ACF11176.1| Shikimate kinase [Chlorobaculum parvum NCIB 8327]
Length = 187
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 60/111 (54%), Gaps = 3/111 (2%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+FL G + + K+ +G LA++L + + D D + E A G+S + F E E +++ E
Sbjct: 7 IFLTGFSGSGKSTIGPLLANSLGFEFIDLDREI-ELAAGKSINRIFAEDGEAAFRELELR 65
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVPPGMVA-RMDH 204
L+++ S +VV G G +++ L+R G +++ P +++ R+ H
Sbjct: 66 TLERIGSQKEMVVSLGGGVLENDRCFELIRRTGTLVYMKSSPEILSLRLQH 116
>gi|430743502|ref|YP_007202631.1| shikimate kinase [Singulisphaera acidiphila DSM 18658]
gi|430015222|gb|AGA26936.1| shikimate kinase [Singulisphaera acidiphila DSM 18658]
Length = 173
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Query: 98 LVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEVL 157
+VG+ K+ +G+ LAD L + D+D + EAA G S F E E ++ E +L
Sbjct: 1 MVGLRGTGKSSVGRILADRLGRPFADAD-VELEAASGRSIPSIFAELGEPCFRDWEERML 59
Query: 158 KQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVPPGMVA 200
+L++ L++ G G + +N LR G +W+ P ++A
Sbjct: 60 GELTTRPELILATGGGVILRESNRKRLREFGFVVWLTADPALLA 103
>gi|349608742|ref|ZP_08888165.1| shikimate kinase [Neisseria sp. GT4A_CT1]
gi|348611599|gb|EGY61243.1| shikimate kinase [Neisseria sp. GT4A_CT1]
Length = 173
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 57/103 (55%), Gaps = 2/103 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L+G+ A KT LG+++A L ++DSD + +G S F E+G++ ET
Sbjct: 10 NLILIGLMGAGKTTLGRYIAQMLDRPFYDSDHEICTTSG-VSIPIIFEMEGEQGFRNRET 68
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLA-LLRHGISLWIDVPP 196
+LK+L++M +++ G G+V N + R+G +++ P
Sbjct: 69 AMLKKLTAMKDIILSTGGGSVLREENRQNMRRNGTVVYLHASP 111
>gi|189351752|ref|YP_001947380.1| shikimate kinase [Burkholderia multivorans ATCC 17616]
gi|189335774|dbj|BAG44844.1| shikimate kinase [Burkholderia multivorans ATCC 17616]
Length = 184
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 55/103 (53%), Gaps = 2/103 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+VF VG+ A KT +G+ +A L +FDSD + EA G F E G++ E
Sbjct: 9 NVFFVGLMGAGKTTVGRAVARRLDRTFFDSDHEI-EARTGARIPVIFELEGEAGFRDREA 67
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPP 196
+++ +L+ +V+ G GAV + N A L+ +GI +++ P
Sbjct: 68 QMIAELTQRENIVLATGGGAVLRAENRACLKGNGIVVYLRANP 110
>gi|221201611|ref|ZP_03574649.1| shikimate kinase [Burkholderia multivorans CGD2M]
gi|221207314|ref|ZP_03580324.1| shikimate kinase [Burkholderia multivorans CGD2]
gi|221213452|ref|ZP_03586427.1| shikimate kinase [Burkholderia multivorans CGD1]
gi|421471824|ref|ZP_15920073.1| shikimate kinase [Burkholderia multivorans ATCC BAA-247]
gi|421479848|ref|ZP_15927512.1| shikimate kinase [Burkholderia multivorans CF2]
gi|221166904|gb|EED99375.1| shikimate kinase [Burkholderia multivorans CGD1]
gi|221172902|gb|EEE05339.1| shikimate kinase [Burkholderia multivorans CGD2]
gi|221178427|gb|EEE10836.1| shikimate kinase [Burkholderia multivorans CGD2M]
gi|400222187|gb|EJO52587.1| shikimate kinase [Burkholderia multivorans CF2]
gi|400224537|gb|EJO54767.1| shikimate kinase [Burkholderia multivorans ATCC BAA-247]
Length = 210
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 55/103 (53%), Gaps = 2/103 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+VF VG+ A KT +G+ +A L +FDSD + EA G F E G++ E
Sbjct: 35 NVFFVGLMGAGKTTVGRAVARRLDRTFFDSDHEI-EARTGARIPVIFELEGEAGFRDREA 93
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPP 196
+++ +L+ +V+ G GAV + N A L+ +GI +++ P
Sbjct: 94 QMIAELTQRENIVLATGGGAVLRAENRACLKGNGIVVYLRANP 136
>gi|240949522|ref|ZP_04753862.1| shikimate kinase [Actinobacillus minor NM305]
gi|240296095|gb|EER46756.1| shikimate kinase [Actinobacillus minor NM305]
Length = 173
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L +FDSDS++ E AG + F E G+++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRQLAQMLGMEFFDSDSVIEERAGAD-IDWIFDVEGEAGFRKREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
++ +L+ +V+ G GAV S N +L GI ++++
Sbjct: 65 RIINELTQGQGVVLSTGGGAVLSKDNRNMLSARGIVIYLE 104
>gi|168209924|ref|ZP_02635549.1| shikimate kinase [Clostridium perfringens B str. ATCC 3626]
gi|170712023|gb|EDT24205.1| shikimate kinase [Clostridium perfringens B str. ATCC 3626]
Length = 167
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 63/119 (52%), Gaps = 3/119 (2%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
+K V L+GM A KT +G+ L+ L+ + D D + E + G+ + F + +E ++
Sbjct: 1 MKKRGVLLIGMPGAGKTTIGRELSKVLKMNFLDMDEFI-ERSTGKEIKELFAQGEEV-FR 58
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVAR-MDHSGFP 208
E++ + LS++ +V+ +G G V N+ + I+++I+ P ++ +D G P
Sbjct: 59 DLESKSCELLSTLKNVVISSGGGIVTREENMGNFKEFITVFINRPLDLIMEDIDTEGRP 117
>gi|187779496|ref|ZP_02995969.1| hypothetical protein CLOSPO_03092 [Clostridium sporogenes ATCC
15579]
gi|187773121|gb|EDU36923.1| shikimate kinase [Clostridium sporogenes ATCC 15579]
Length = 174
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 72/148 (48%), Gaps = 8/148 (5%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L+GM + K+ LG+ L+ L+Y + D+D L+ E GE+ + F+ E +++ E
Sbjct: 7 NIILIGMPLSGKSTLGRELSKILKYDFIDTDVLI-EEIEGENIKEIFKIYGEDYFREKEL 65
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVP-PGMVARMDHSGFPESEV 212
E++ +L V+ G G + N+ L++ G ++++ VP ++ RM +
Sbjct: 66 EIINKLKKEKNKVISTGGGLPIYNGNIYKLKNIGFTVYLKVPLEELIKRMVKKENNTRPL 125
Query: 213 LPQ-----LFALYKEMRDGYATADVTVS 235
L L +YKE D Y A +
Sbjct: 126 LKNNDTKFLEGMYKERIDIYEKAHTIIC 153
>gi|119384027|ref|YP_915083.1| shikimate kinase [Paracoccus denitrificans PD1222]
gi|119373794|gb|ABL69387.1| shikimate kinase [Paracoccus denitrificans PD1222]
Length = 178
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 81/171 (47%), Gaps = 13/171 (7%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L+GM A KT +G LA LR + D+D+ + E A + + F E+ ++ E+
Sbjct: 4 NIVLIGMMGAGKTAIGGELARRLRRPFSDTDAEI-ERAAAMTIPEIFARDGEEFFRARES 62
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALL-RHGISLWIDVP-PGMVARMDHSGFPESEV 212
EVL ++ + G VV G GA N A + G+S+W+D + R+ H P +
Sbjct: 63 EVLGRVLASGPGVVSTGGGAWLRPENRARIGEDGVSVWLDCDLETLWHRVRHR--PTRPL 120
Query: 213 L----PQ--LFALYKEMRDGYATADVTVSLQKVAS--QLGYDDLDAVTTED 255
L P+ L L E YA AD+ V Q+ S Q LDA+ D
Sbjct: 121 LQTPDPRGTLERLLDERSPVYALADIRVPAQRGDSIEQTADRVLDAIRAHD 171
>gi|407786293|ref|ZP_11133439.1| shikimate kinase [Celeribacter baekdonensis B30]
gi|407202025|gb|EKE72021.1| shikimate kinase [Celeribacter baekdonensis B30]
Length = 182
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+V LVGM A KT +GK +A L + DSD+ + E A S A+ F E ++Q E
Sbjct: 8 TVALVGMMGAGKTAVGKAMAARLSVPFLDSDAEI-EKAAAMSVAEIFSRDGEAFFRQREA 66
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALL-RHGISLWI 192
EV+ +L + V+ G GA + N ++ ++G+++W+
Sbjct: 67 EVIARLLETQQAVLSTGGGAFLAEVNRNIIAKNGVAVWL 105
>gi|386399833|ref|ZP_10084611.1| shikimate kinase [Bradyrhizobium sp. WSM1253]
gi|385740459|gb|EIG60655.1| shikimate kinase [Bradyrhizobium sp. WSM1253]
Length = 207
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 2/109 (1%)
Query: 85 ADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRES 144
ADI + L S+ LVGM K+ +G+ +A L+ + D+D+ + EAA G + + F
Sbjct: 14 ADILSALGTRSIVLVGMMGVGKSTIGRRMALRLKLPFVDADTEI-EAAAGMTIPEIFERH 72
Query: 145 DEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLA-LLRHGISLWI 192
E ++ E V+ +L G +V+ G GA A + IS+W+
Sbjct: 73 GEPHFRDGEARVIARLLDGGPIVLATGGGAFMREETRARIAAKAISIWL 121
>gi|312127273|ref|YP_003992147.1| shikimate kinase [Caldicellulosiruptor hydrothermalis 108]
gi|311777292|gb|ADQ06778.1| Shikimate kinase [Caldicellulosiruptor hydrothermalis 108]
Length = 172
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L G + KT +GK +A+ L D+DS V + G + K F EK +++ ET
Sbjct: 3 NIVLTGFMGSGKTTIGKLIAEKLDIELIDTDSEVIKEFGM-TIDKIFEVHGEKKFREVET 61
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRHG 187
V++++S + +V+ G G V + N+ LLR
Sbjct: 62 RVIERVSKLENVVISTGGGVVLNPENVKLLREN 94
>gi|403378941|ref|ZP_10920998.1| shikimate kinase [Paenibacillus sp. JC66]
Length = 168
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 76/154 (49%), Gaps = 14/154 (9%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
+ ++ LVG K+ +GK LA+ L + + D D + EA G+S FRE E+ ++
Sbjct: 1 MNKNNIVLVGFMGTGKSTVGKALAERLNWTFVDVDREI-EAVEGKSIPVLFREKGEEYFR 59
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSAN-LALLRHGISLWIDVPPG-MVARMDH---- 204
Q+E E + ++ R +V G GAV AN A+ G+ + + ++ R+ +
Sbjct: 60 QSEQEQIARVMQGSRQIVSMGGGAVLREANRRAMAASGLVVALTASASTILERVKNDPDR 119
Query: 205 ---SGFPESEVLPQLFALYKEMRDGYATADVTVS 235
+G PE ++ L KE ++ Y AD+ ++
Sbjct: 120 PLLAGNPEQKIA----QLLKERKNAYQFADIHIN 149
>gi|357029137|ref|ZP_09091144.1| hypothetical protein MEA186_30097, partial [Mesorhizobium amorphae
CCNWGS0123]
gi|355536211|gb|EHH05488.1| hypothetical protein MEA186_30097, partial [Mesorhizobium amorphae
CCNWGS0123]
Length = 293
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 72/175 (41%), Gaps = 27/175 (15%)
Query: 76 PSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGE 135
P A A +I L G V LVGM +A K+ +G LA LR + D+D ++ +
Sbjct: 36 PQTARSPVAKEIFAALNGRPVVLVGMPSAGKSSIGPALARRLRLPFVDTDKII-QKDTRI 94
Query: 136 SAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALL-RHGISLWIDV 194
S ++ F E ++ E V+ L G V+ G GA + L+ +S+W+D
Sbjct: 95 SISQIFEVHGEAFFRDMEARVIADLLQKGPAVIATGGGAFMREQSRHLIGEKAVSIWLDT 154
Query: 195 PPGMVARMD---------------HSGFPESEVLPQLFALYKEMRDGYATADVTV 234
R+D PE ++ L E R YA AD+TV
Sbjct: 155 ------RLDVIEKRTRNDTSRPLLQGPNPEQKIA----RLLSERRPFYAQADITV 199
>gi|18309683|ref|NP_561617.1| shikimate kinase [Clostridium perfringens str. 13]
gi|18144360|dbj|BAB80407.1| shikimate kinase [Clostridium perfringens str. 13]
Length = 171
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 63/119 (52%), Gaps = 3/119 (2%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
+K V L+GM A KT +G+ L+ L+ + D D + E + G+ + F + +E ++
Sbjct: 1 MKKRGVLLIGMPGAGKTTIGRELSKVLKMNFLDMDEFI-ERSTGKEIKELFAQGEEV-FR 58
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVAR-MDHSGFP 208
E++ + LS++ +V+ +G G V N+ + I+++I+ P ++ +D G P
Sbjct: 59 DLESKSCELLSTLKNVVISSGGGIVTREENMGNFKEFITVFINRPLDLIMEDIDTEGRP 117
>gi|255533540|ref|YP_003093912.1| shikimate kinase [Pedobacter heparinus DSM 2366]
gi|255346524|gb|ACU05850.1| Shikimate kinase [Pedobacter heparinus DSM 2366]
Length = 169
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 62/123 (50%), Gaps = 2/123 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+FL+G K+ +GK LA L Y + D D + E G++ F E E +++ E+
Sbjct: 3 KIFLIGFMGCGKSTMGKKLAVKLGYDFVDLDQQI-EKNIGKTIGAYFSEHGEAAFRKLES 61
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMVARMDHSGFPESEVL 213
+ LK +V+ G GA N+ + +G++++I++PP +A+ SG + +L
Sbjct: 62 DTLKHFDYPANVVIATGGGAPCFFDNMDWMNANGLTMYIEMPPAALAKRLESGKEKRPLL 121
Query: 214 PQL 216
L
Sbjct: 122 RDL 124
>gi|30249927|ref|NP_841997.1| shikimate kinase [Nitrosomonas europaea ATCC 19718]
gi|75540210|sp|Q82TC0.1|AROK_NITEU RecName: Full=Shikimate kinase; Short=SK
gi|30139034|emb|CAD85891.1| Shikimate kinase [Nitrosomonas europaea ATCC 19718]
Length = 211
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L+GM + KT +GK LA+ + + D D + + G F E G+++ E+
Sbjct: 28 NIILIGMMGSGKTTVGKLLANLVGKTFIDIDHEI-QRRTGVGIPVIFEIEGEAGFRKRES 86
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVP 195
EVL+ + +V+ G GA+ N ALLR HG +++ P
Sbjct: 87 EVLRDIVRQQNIVLATGGGAILHPDNRALLRQHGTVVYLCAP 128
>gi|88705190|ref|ZP_01102901.1| Shikimate kinase [Congregibacter litoralis KT71]
gi|88700280|gb|EAQ97388.1| Shikimate kinase [Congregibacter litoralis KT71]
Length = 170
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 17/164 (10%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
VFLVG A KT +GK LA L+ + DSDS + E+ G A F E+G++ E
Sbjct: 7 VFLVGPMGAGKTTIGKLLARGLKLGFADSDSEI-ESRTGADIAWIFDVEGEEGFRNREES 65
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALL-RHGISLW--------IDVPPGMVARMDHSG 206
V+ +++ + V+ G G V +AN +L G ++ I G +R +G
Sbjct: 66 VIDEMTLLDHTVLATGGGVVMRNANRRVLASRGFVIYLHATLDEQIRRTRGDRSRPLLNG 125
Query: 207 FPESEVLPQLFA----LYKEMRDGYATADVT---VSLQKVASQL 243
L +LFA LY+E+ D D + V Q++ +QL
Sbjct: 126 KDPEATLRELFALRDPLYREIADHVIDTDSSSPKVIAQRLLAQL 169
>gi|115312149|sp|Q39X05.1|AROK_GEOMG RecName: Full=Shikimate kinase; Short=SK
Length = 168
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+V L G K+ +G+ LA L + Y D D+L+ E G S + F E ++ ET
Sbjct: 3 NVILTGFMGTGKSSVGRLLAHRLGFRYCDLDALIVEGEG-VSINEIFARHGEPHFRALET 61
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR 185
E ++ +S R VV G GAV S N LLR
Sbjct: 62 EAVRSVSREERCVVSTGGGAVISPENRCLLR 92
>gi|312622092|ref|YP_004023705.1| shikimate kinase [Caldicellulosiruptor kronotskyensis 2002]
gi|312202559|gb|ADQ45886.1| Shikimate kinase [Caldicellulosiruptor kronotskyensis 2002]
Length = 172
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L G KT +GK +A+ L D+DS V + G + K F EK +++ ET
Sbjct: 3 NIVLTGFMGCGKTTIGKLIAEKLDIELIDTDSEVIKEFGM-TIDKIFEVHGEKKFREVET 61
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRHG 187
V++++S + +V+ G G V + N+ LLR
Sbjct: 62 RVIERVSKLENVVISTGGGVVLNPENVKLLREN 94
>gi|239907380|ref|YP_002954121.1| shikimate kinase II [Desulfovibrio magneticus RS-1]
gi|239797246|dbj|BAH76235.1| shikimate kinase II [Desulfovibrio magneticus RS-1]
Length = 174
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 1/107 (0%)
Query: 94 TSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAE 153
T+++L+G + KT LG+ LA++L + D D+ EA G E+ A+ +++AE
Sbjct: 7 TNIYLIGPRASGKTTLGRKLAESLGRSFVDLDARFVEARG-ETIAELVAREGWDAFRRAE 65
Query: 154 TEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVA 200
++L + ++ LV G G V N ALL G+ L++ P +A
Sbjct: 66 ADILAETAAQKGLVAATGGGVVLLPENRALLAKGLVLYLQAHPDRLA 112
>gi|168217168|ref|ZP_02642793.1| shikimate kinase [Clostridium perfringens NCTC 8239]
gi|182380745|gb|EDT78224.1| shikimate kinase [Clostridium perfringens NCTC 8239]
Length = 171
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 63/119 (52%), Gaps = 3/119 (2%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
+K V L+GM A KT +G+ L+ L+ + D D + E + G+ + F + +E ++
Sbjct: 1 MKKRGVLLIGMPGAGKTTIGRDLSKVLKMNFLDMDEFI-ERSTGKEIKELFAQGEEV-FR 58
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVAR-MDHSGFP 208
E++ + LS++ +V+ +G G V N+ + I+++I+ P ++ +D G P
Sbjct: 59 DLESKSCELLSTLKNVVISSGGGIVTREENMGNFKEFITVFINRPLDLIMEDIDTEGRP 117
>gi|425743417|ref|ZP_18861499.1| shikimate kinase 1 [Acinetobacter baumannii WC-323]
gi|425494282|gb|EKU60495.1| shikimate kinase 1 [Acinetobacter baumannii WC-323]
Length = 180
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+++LVG A KT +G+ LA+ L + DSD + E G + F + E G++ ET
Sbjct: 11 NIYLVGPMGAGKTTVGRHLAELLGRDFIDSDHEI-ERKTGATIPWIFEKEGEVGFRLRET 69
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVP 195
VL L+S LV+ G GAV N L+ GI +++ P
Sbjct: 70 NVLNDLTSRPLLVLATGGGAVTQVKNREFLKQRGIVVYLYTP 111
>gi|384515778|ref|YP_005710870.1| shikimate kinase [Corynebacterium ulcerans 809]
gi|334696979|gb|AEG81776.1| Shikimate kinase [Corynebacterium ulcerans 809]
Length = 198
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 4/101 (3%)
Query: 97 FLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQ-AETE 155
LVG A KT +GK LA+AL + D+D+L+ E + G+ F + E +++ E +
Sbjct: 33 VLVGPPGAGKTTVGKRLANALHTTFVDTDALI-EQSAGQPCGVIFSQMGEPEFRKLEENK 91
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPP 196
V + L + G VV G GAV S +LL +WIDV P
Sbjct: 92 VREALGTSG--VVSLGGGAVLSPLTRSLLLGHTVIWIDVNP 130
>gi|110802259|ref|YP_698020.1| shikimate kinase [Clostridium perfringens SM101]
gi|110682760|gb|ABG86130.1| shikimate kinase [Clostridium perfringens SM101]
Length = 167
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 63/119 (52%), Gaps = 3/119 (2%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
+K V L+GM A KT +G+ L+ L+ + D D + E + G+ + F + +E ++
Sbjct: 1 MKKRGVLLIGMPGAGKTTIGRELSTVLKMNFLDMDEFI-ERSTGKEIKELFAQGEEV-FR 58
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVAR-MDHSGFP 208
E++ + LS++ +V+ +G G V N+ + I+++I+ P ++ +D G P
Sbjct: 59 DLESKSCELLSTLKNVVISSGGGIVTREENMGNFKEFITVFINRPLDLIMEDIDTEGRP 117
>gi|421609743|ref|ZP_16050931.1| shikimate kinase II [Rhodopirellula baltica SH28]
gi|408499516|gb|EKK03987.1| shikimate kinase II [Rhodopirellula baltica SH28]
Length = 187
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 3/115 (2%)
Query: 90 ELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGY 149
E+K ++L G K+ L K LA L D D V E G+S A+ F + E G+
Sbjct: 5 EVKPQHLYLTGYRGCGKSTLAKLLAQKLSLPSVDLDD-VIETTAGKSIAEIFADETEVGF 63
Query: 150 QQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVPPG-MVARM 202
+ E L ++S + V+ G G + AN ++ + G +W+D P +VAR+
Sbjct: 64 RDREEAALMEVSRRPQHVIALGGGTILREANRNIIANSGWCVWLDAEPDVLVARL 118
>gi|114800012|ref|YP_758815.1| shikimate kinase [Hyphomonas neptunium ATCC 15444]
gi|114740186|gb|ABI78311.1| shikimate kinase [Hyphomonas neptunium ATCC 15444]
Length = 186
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 58/104 (55%), Gaps = 2/104 (1%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
+G ++ LVG+ A K+ +G+ LA+ L ++DSD + E A G S + F + E ++
Sbjct: 14 FEGRTIALVGLMGAGKSTVGRRLAEKLGRDFYDSDHEI-EKAAGLSISDIFAKHGEADFR 72
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
+ E +V+++L + V+ G GA A+LR I++W++
Sbjct: 73 RGEKQVIRRLLDLQPHVLATGGGAYLDPDTRAILRERAITVWLN 116
>gi|424912398|ref|ZP_18335775.1| shikimate kinase [Rhizobium leguminosarum bv. viciae USDA 2370]
gi|392848429|gb|EJB00952.1| shikimate kinase [Rhizobium leguminosarum bv. viciae USDA 2370]
Length = 193
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 79/156 (50%), Gaps = 9/156 (5%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ VG+ A K+ +G+ +A LR + D+D + E + ++ F E+ ++ ET
Sbjct: 24 NIVFVGLMGAGKSAIGRMVAQQLRVPFIDTD-VEIERVSRMTISELFATYGEEEFRALET 82
Query: 155 EVLKQLSSMGRLVVCAGNGA-VQSSANLALLRHGISLW----IDVPPGMVARMDHSGFPE 209
V+K+L G V+ G GA + + + R GISLW ++V V + DH +
Sbjct: 83 RVIKRLLRGGPKVISTGGGAFINDNTRRHISRGGISLWLKADLEVLWERVNKRDHRPLLK 142
Query: 210 SEVLPQ--LFALYKEMRDGYATADVTVSLQKVASQL 243
+E P+ L AL ++ Y+ AD+T+ + V ++
Sbjct: 143 TEN-PRATLAALMEKRYPIYSEADLTIESRDVRKEI 177
>gi|90422056|ref|YP_530426.1| shikimate kinase [Rhodopseudomonas palustris BisB18]
gi|90104070|gb|ABD86107.1| shikimate kinase [Rhodopseudomonas palustris BisB18]
Length = 206
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 77/169 (45%), Gaps = 7/169 (4%)
Query: 85 ADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRES 144
A+I L + LVGM A K+ +G+ LA L + D+D+ + EAA G + A+ F
Sbjct: 16 AEIVAALGRRPIVLVGMMGAGKSTVGRRLATRLHLPFVDADTEI-EAAAGMTIAEIFANH 74
Query: 145 DEKGYQQAETEVLKQLSSMGRLVVCAGNGA-VQSSANLALLRHGISLWIDVPPGMV---- 199
E ++ E V+ +L G V+ G GA ++ L + +SLW+ ++
Sbjct: 75 GEPYFRDGEARVIARLLDNGPHVLATGGGAFMRDDTRLRIAAQAVSLWLHAEADVILRRI 134
Query: 200 -ARMDHSGFPESEVLPQLFALYKEMRDGYATADVTVSLQKVASQLGYDD 247
R D ++ + L E Y +AD+T++ + V + D+
Sbjct: 135 KRRADRPLLKTADPAATIDRLIAERYPVYQSADLTIASRDVPHEKIVDE 183
>gi|338997248|ref|ZP_08635949.1| shikimate kinase [Halomonas sp. TD01]
gi|338765845|gb|EGP20776.1| shikimate kinase [Halomonas sp. TD01]
Length = 188
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FL+G A K+ +G+ LA L +FDSD + + G + F E G++Q E+
Sbjct: 6 NIFLIGPMGAGKSTIGRLLAAELSRSFFDSDHAIQDRCGAD-IPWIFDVEGEPGFRQRES 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRH 186
+++ +L+ + +VV G GAV N LR
Sbjct: 65 QMIDELTQLPSVVVATGGGAVLREENRRALRE 96
>gi|337290865|ref|YP_004629886.1| shikimate kinase [Corynebacterium ulcerans BR-AD22]
gi|334699171|gb|AEG83967.1| Shikimate kinase [Corynebacterium ulcerans BR-AD22]
Length = 198
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 4/101 (3%)
Query: 97 FLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQ-AETE 155
LVG A KT +GK LA+AL + D+D+L+ E + G+ F + E +++ E +
Sbjct: 33 VLVGPPGAGKTTVGKRLANALHTTFVDTDALI-EQSAGQPCGVIFSQMGEPEFRKLEENK 91
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPP 196
V + L + G VV G GAV S +LL +WIDV P
Sbjct: 92 VREALGTSG--VVSLGGGAVLSPLTRSLLLGHTVIWIDVNP 130
>gi|268593115|ref|ZP_06127336.1| shikimate kinase [Providencia rettgeri DSM 1131]
gi|291311385|gb|EFE51838.1| shikimate kinase [Providencia rettgeri DSM 1131]
Length = 165
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 61/106 (57%), Gaps = 3/106 (2%)
Query: 97 FLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEV 156
+++G + KT +GK A++ Y + D+D L+ E A G+S A+ + ++Q ET+V
Sbjct: 3 YIIGPRGSGKTTIGKKFAESKGYQFVDTDKLILEKA-GKSIAEIVEQHGWDYFRQLETDV 61
Query: 157 LKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMVAR 201
LK ++ ++V G G V + N ++R +G ++++ P ++A+
Sbjct: 62 LKSITQ-SDMIVSTGGGLVLAEENQQIMRNNGTVIYLNTHPEVLAK 106
>gi|293602580|ref|ZP_06685025.1| shikimate kinase [Achromobacter piechaudii ATCC 43553]
gi|292819056|gb|EFF78092.1| shikimate kinase [Achromobacter piechaudii ATCC 43553]
Length = 189
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
VFLVGM A KT +G+ LA AL + D D EA G F E G+++ E+
Sbjct: 20 VFLVGMMGAGKTTIGRSLARALGREFMDLDH-ELEARCGVRVPVIFEIEGEAGFRRRESA 78
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWI 192
L++ + +++ G GA+ +S N LR GI +++
Sbjct: 79 ALEECTQRRNIILATGGGAILASENRQRLRERGIVIYL 116
>gi|126736335|ref|ZP_01752077.1| shikimate kinase, putative [Roseobacter sp. CCS2]
gi|126714156|gb|EBA11025.1| shikimate kinase, putative [Roseobacter sp. CCS2]
Length = 185
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 59/100 (59%), Gaps = 2/100 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+V LVGM + KT +G+ LA AL + DSD+ + EAA A R+ EK +++ E
Sbjct: 12 TVVLVGMMGSGKTAIGRALAAALDVPFLDSDAAIEEAAAATIAEIFARDG-EKFFRKREA 70
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANL-ALLRHGISLWID 193
EVL++L S +V G GA + AN A+ + G+++W+D
Sbjct: 71 EVLRRLLSGPPGIVSTGGGAFLAEANRDAIAKMGVAVWLD 110
>gi|119475137|ref|ZP_01615490.1| shikimate kinase I [marine gamma proteobacterium HTCC2143]
gi|119451340|gb|EAW32573.1| shikimate kinase I [marine gamma proteobacterium HTCC2143]
Length = 171
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 94 TSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAE 153
++VFLVG A K+ +G+ LA LR + D+D + E G F E+G++ E
Sbjct: 5 SNVFLVGPMGAGKSTIGRLLAAELRLDFNDTDKAI-EDRSGVDIPWIFDMEGEEGFRDRE 63
Query: 154 TEVLKQLSSMGRLVVCAGNGAVQSSANLALL 184
VL +LS + ++++ G G +Q S N +L
Sbjct: 64 AAVLDELSQLDKVLLATGGGIIQKSENRRVL 94
>gi|421596693|ref|ZP_16040459.1| shikimate kinase [Bradyrhizobium sp. CCGE-LA001]
gi|404271198|gb|EJZ35112.1| shikimate kinase [Bradyrhizobium sp. CCGE-LA001]
Length = 207
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 2/108 (1%)
Query: 86 DISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESD 145
DI + L S+ LVGM K+ +G+ +A L+ + D+D+ + EAA G + + F
Sbjct: 15 DILSALGTRSIVLVGMMGVGKSTIGRRMAARLKLPFVDADTEI-EAAAGMTIPEIFERHG 73
Query: 146 EKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLA-LLRHGISLWI 192
E ++ E V+ +L G +V+ G GA A + +SLW+
Sbjct: 74 EPHFRDGEARVIARLLDGGPIVLATGGGAFMREETRARIAARAVSLWL 121
>gi|210632921|ref|ZP_03297596.1| hypothetical protein COLSTE_01503 [Collinsella stercoris DSM 13279]
gi|210159333|gb|EEA90304.1| shikimate kinase [Collinsella stercoris DSM 13279]
Length = 427
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 78/181 (43%), Gaps = 8/181 (4%)
Query: 19 PKGLKFDPPFSLLHSQSYAPIRTSLQYSIISRK-PRITTRSIADDTTSNTVTKVAAEDPS 77
P L+ P L Y P RT+L R P + + V + E
Sbjct: 194 PCSLESLPALEGLIDIVYNPARTALMMEAERRDVPNAGGLLMLVAQAAQAVERYTGEHID 253
Query: 78 FAVKKKAADISTELKGT--SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGE 135
A + D++ L + +V L+GM KT +G+ LA L + D D F G
Sbjct: 254 MA---RIMDVTARLSASEQNVALIGMPGCGKTRVGEQLAKLLDRTHVDIDR-AFGEEVGM 309
Query: 136 SAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALL-RHGISLWIDV 194
S A+ E+ ++ ETEVL ++++ LV+ G G V S N ALL ++ I + +D
Sbjct: 310 SCAEFIETQGEEAFRVRETEVLGRIAAQSGLVISCGGGVVTRSENYALLHQNSIIVMLDR 369
Query: 195 P 195
P
Sbjct: 370 P 370
>gi|168213890|ref|ZP_02639515.1| shikimate kinase [Clostridium perfringens CPE str. F4969]
gi|170714629|gb|EDT26811.1| shikimate kinase [Clostridium perfringens CPE str. F4969]
Length = 167
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
+K V L+GM + KT +G+ L+ L+ + D D + E + G+ + F + +E ++
Sbjct: 1 MKKRGVLLIGMPGSGKTTIGRELSKVLKMNFLDMDEFI-ERSTGKEIKELFAQGEEV-FR 58
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVAR-MDHSGFP- 208
E++ + LS++ +V+ +G G V N+ + I+++I+ P ++ +D G P
Sbjct: 59 DLESKSCELLSTLKNVVISSGGGIVTREENMGNFKEFITVFINRPLDLIMEDIDTEGRPL 118
Query: 209 ---ESEVLPQLFA----LYKE------MRDGYATADVTVSLQKVASQLGY 245
E L L+ LYK+ + DG T + + K S+L Y
Sbjct: 119 LWDGKERLTNLYRDRIDLYKKHSDIEIINDG-TTKEAIKEIVKAISELSY 167
>gi|422323479|ref|ZP_16404518.1| shikimate kinase [Achromobacter xylosoxidans C54]
gi|317401527|gb|EFV82157.1| shikimate kinase [Achromobacter xylosoxidans C54]
Length = 213
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 7/127 (5%)
Query: 69 TKVAAEDPSFA--VKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDS 126
T A E+P A +A + +L +FLVGM A KT +G+ LA AL + D D
Sbjct: 18 TGEAPENPPCASECAGRAVSLPHDL---PIFLVGMMGAGKTTIGRGLARALGRDFIDLDH 74
Query: 127 LVFEAAGGESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLR- 185
EA G F E G+++ E+ L++ + +++ G GA+ ++ N A LR
Sbjct: 75 -ELEARCGVRVPVIFEIEGETGFRRRESAALEECTQRRNIILATGGGAILAAENRARLRE 133
Query: 186 HGISLWI 192
GI +++
Sbjct: 134 RGIVVYL 140
>gi|148652212|ref|YP_001279305.1| shikimate kinase [Psychrobacter sp. PRwf-1]
gi|172048468|sp|A5WCG4.1|AROK_PSYWF RecName: Full=Shikimate kinase; Short=SK
gi|148571296|gb|ABQ93355.1| shikimate kinase [Psychrobacter sp. PRwf-1]
Length = 180
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 2/99 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
S+F+VG A KT +GK LA L + DSD + E G + F + E G+++ E
Sbjct: 7 SLFIVGPMGAGKTTVGKLLAKHLGRDFIDSDHYICEQTGAD-IPWIFEKEGETGFREREA 65
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANL-ALLRHGISLWI 192
+ +L+++ +V+ G G V N L + GI++++
Sbjct: 66 RAIAELTALPNVVLATGGGVVMQPQNRDNLTKQGITIYL 104
>gi|408784842|ref|ZP_11196592.1| shikimate kinase [Rhizobium lupini HPC(L)]
gi|408489181|gb|EKJ97485.1| shikimate kinase [Rhizobium lupini HPC(L)]
Length = 193
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 79/156 (50%), Gaps = 9/156 (5%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ VG+ A K+ +G+ +A LR + D+D + E + ++ F E+ ++ ET
Sbjct: 24 NIVFVGLMGAGKSAIGRMVAQHLRVPFIDTD-VEIERVSRMTISELFATYGEEEFRALET 82
Query: 155 EVLKQLSSMGRLVVCAGNGA-VQSSANLALLRHGISLW----IDVPPGMVARMDHSGFPE 209
V+K+L G V+ G GA + + + R GISLW ++V V + DH +
Sbjct: 83 RVIKRLLRGGPKVISTGGGAFINDNTRRHISRGGISLWLKADLEVLWERVNKRDHRPLLK 142
Query: 210 SEVLPQ--LFALYKEMRDGYATADVTVSLQKVASQL 243
+E P+ L AL ++ Y+ AD+T+ + V ++
Sbjct: 143 TEN-PRATLAALMEKRYPIYSEADLTIESRDVRKEI 177
>gi|383768883|ref|YP_005447946.1| shikimate kinase [Bradyrhizobium sp. S23321]
gi|381357004|dbj|BAL73834.1| shikimate kinase [Bradyrhizobium sp. S23321]
Length = 207
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
Query: 85 ADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRES 144
ADI + L S+ LVGM K+ +G+ LA L+ + D+D+ + EAA G + + F
Sbjct: 14 ADILSALGSRSIVLVGMMGVGKSTIGRRLALRLKLPFVDADTEI-EAAAGMTIPEIFEHH 72
Query: 145 DEKGYQQAETEVLKQLSSMGRLVVCAGNGA-VQSSANLALLRHGISLWI 192
E ++ E V+ +L G +V+ G GA ++ + +S+W+
Sbjct: 73 GEPHFRDGEARVIARLLDGGPIVLATGGGAFMREETRSRIAAKAVSIWL 121
>gi|357030301|ref|ZP_09092253.1| hypothetical protein MEA186_35734, partial [Mesorhizobium amorphae
CCNWGS0123]
gi|355532803|gb|EHH02167.1| hypothetical protein MEA186_35734, partial [Mesorhizobium amorphae
CCNWGS0123]
Length = 944
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 77/176 (43%), Gaps = 18/176 (10%)
Query: 72 AAEDPS---FAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLV 128
AAE P A A +I L G V LVGM +A K+ +G LA LR + D+D ++
Sbjct: 726 AAEQPGPPLIARSPVAKEIFAALNGRPVVLVGMPSAGKSSIGPALARRLRLPFVDTDKII 785
Query: 129 FEAAGGESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALL-RHG 187
+ S ++ F E ++ E V+ L G V+ G GA + L+
Sbjct: 786 -QKDTRISISQIFEVHGEAFFRDMEAGVIADLLQKGPAVIATGGGAFMREQSRHLIGEKA 844
Query: 188 ISLWIDVPPGMV---ARMDHS------GFPESEVLPQLFALYKEMRDGYATADVTV 234
+S+W+D ++ R D S PE ++ L E R YA AD+TV
Sbjct: 845 VSIWLDTRLDVIEKRTRNDTSRPLLQGPNPEQKIA----RLLSERRPFYAQADITV 896
>gi|182624122|ref|ZP_02951909.1| shikimate kinase [Clostridium perfringens D str. JGS1721]
gi|177910738|gb|EDT73098.1| shikimate kinase [Clostridium perfringens D str. JGS1721]
Length = 167
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
+K V L+GM + KT +G+ L+ L+ + D D + E + G+ + F + +E ++
Sbjct: 1 MKKRGVLLIGMPGSGKTTIGRELSKVLKMNFLDMDEFI-ERSTGKEIKELFAQGEEV-FR 58
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVAR-MDHSGFP- 208
E++ + LS++ +V+ +G G V N+ + I+++I+ P ++ +D G P
Sbjct: 59 DLESKSCELLSTLKNVVISSGGGIVTREENMGNFKEFITVFINRPLDLIMEDIDTEGRPL 118
Query: 209 ---ESEVLPQLFA----LYKE------MRDGYATADVTVSLQKVASQLGY 245
E L L+ LYK+ + DG T + + K S+L Y
Sbjct: 119 LWDGKERLTNLYRDRIDLYKKHSDIEIINDG-TTKEAIREIVKAISELSY 167
>gi|116688416|ref|YP_834039.1| shikimate kinase [Burkholderia cenocepacia HI2424]
gi|116646505|gb|ABK07146.1| shikimate kinase [Burkholderia cenocepacia HI2424]
Length = 184
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+VF VG+ A KT +G+ +A L +FDSD + EA G F E G++ ET
Sbjct: 9 NVFFVGLMGAGKTTVGRAVARRLDRTFFDSDHEI-EARTGARIPVIFELEGEAGFRDRET 67
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPP 196
+V+ +L+ +V+ G GAV N L+ +GI +++ P
Sbjct: 68 QVIAELAQRENIVLATGGGAVLRPENRDSLKTNGIVVYLRANP 110
>gi|372268165|ref|ZP_09504213.1| shikimate kinase [Alteromonas sp. S89]
Length = 174
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+FLVG A K+ +GK LA L + DSD V E G F E G+++ E+E
Sbjct: 6 IFLVGPMGAGKSTIGKLLAAQLGLPFADSDK-VLEDRTGADIPWIFDVEGEAGFRRRESE 64
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLRHG 187
VL+ L + V+ G G V N LL+HG
Sbjct: 65 VLRDLCNGEVQVIATGGGIVLKPENRELLKHG 96
>gi|104779613|ref|YP_606111.1| shikimate kinase [Pseudomonas entomophila L48]
gi|166219253|sp|Q1IGA8.1|AROK_PSEE4 RecName: Full=Shikimate kinase; Short=SK
gi|95108600|emb|CAK13294.1| shikimate-kinase [Pseudomonas entomophila L48]
Length = 172
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ LVG A K+ +G+ LA LR + DSD + E G + F + E G+++ E
Sbjct: 3 NLILVGPMGAGKSTIGRLLAKELRLLFKDSDKEI-ELRTGANIPWIFDKEGEPGFREREQ 61
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRHG 187
++ +L ++ +V+ G GAV AN A LR G
Sbjct: 62 AMIAELCALDGVVLATGGGAVMRDANRAALRAG 94
>gi|376261192|ref|YP_005147912.1| shikimate kinase [Clostridium sp. BNL1100]
gi|373945186|gb|AEY66107.1| shikimate kinase [Clostridium sp. BNL1100]
Length = 195
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
++ ++ L+G KT +G L++AL Y ++D D+++ + + F E ++
Sbjct: 1 MRDKNIVLIGFMGVGKTTVGNVLSNALNYNFYDCDNII-KQQFSMNIKDLFELYGEAYFR 59
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANL-ALLRHGISLWIDVPPGMVAR 201
E +V+K+LS+ + V+ G G V + +N+ L ++GI ++++ P + R
Sbjct: 60 DVEAKVIKELSNSSKSVIATGGGIVLNPSNIYNLKKNGIIIFLEALPATILR 111
>gi|399992601|ref|YP_006572841.1| shikimate kinase AroK [Phaeobacter gallaeciensis DSM 17395 = CIP
105210]
gi|398657156|gb|AFO91122.1| shikimate kinase AroK [Phaeobacter gallaeciensis DSM 17395 = CIP
105210]
Length = 196
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 73/147 (49%), Gaps = 9/147 (6%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ +VGM A KT +G+ LA L+ + DSD + EAA + + F E +++ E
Sbjct: 23 TIVMVGMMGAGKTAVGRALAARLQAPFLDSDHEI-EAAANRTIPEIFARDGEPFFRKKER 81
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALL-RHGISLW----IDVPPGMVARMDHSGFPE 209
+V+++L R V+ G GA + N ++ G+++W ++V V D
Sbjct: 82 QVIRRLLDEERGVLSTGGGAFLAEENRQIISERGVAIWLNADLEVLWNRVKHRDTRPLLR 141
Query: 210 SEVLPQ--LFALYKEMRDGYATADVTV 234
+E P L ALY + YA AD+TV
Sbjct: 142 TED-PHATLSALYHDRVPYYAQADLTV 167
>gi|424778842|ref|ZP_18205781.1| shikimate kinase [Alcaligenes sp. HPC1271]
gi|422886366|gb|EKU28789.1| shikimate kinase [Alcaligenes sp. HPC1271]
Length = 201
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+ LVGM A KT +G+ LA L+ + D D EA G A F E+G+++ E+
Sbjct: 34 IILVGMMGAGKTTIGRQLARELKREFMDLDH-ELEARSGVRVATIFEFEGEQGFRKRESA 92
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWI 192
VL S +V+ G GA+ S AN +++ GI +++
Sbjct: 93 VLDICSRQTGIVLATGGGAILSEANRQIIKDRGIVVYL 130
>gi|16127238|ref|NP_421802.1| shikimate kinase [Caulobacter crescentus CB15]
gi|221236039|ref|YP_002518476.1| shikimate kinase [Caulobacter crescentus NA1000]
gi|81534559|sp|Q9A435.1|AROK_CAUCR RecName: Full=Shikimate kinase; Short=SK
gi|254806772|sp|B8H331.1|AROK_CAUCN RecName: Full=Shikimate kinase; Short=SK
gi|13424646|gb|AAK24970.1| shikimate kinase [Caulobacter crescentus CB15]
gi|220965212|gb|ACL96568.1| shikimate kinase [Caulobacter crescentus NA1000]
Length = 200
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 69/141 (48%), Gaps = 7/141 (4%)
Query: 62 DTTSNTVTKVAAEDPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYY 121
D T +T + A E V +D L+ ++ LVG+ K+ +G+ LA+ L +
Sbjct: 5 DQTPDTAPEAAPE-----VAPIVSDDLAPLRAKTIVLVGLMGVGKSSVGRRLANVLGLPF 59
Query: 122 FDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANL 181
D+D+ V EAA G S ++ F E E ++ E V+ +L V+ G GA ++
Sbjct: 60 RDADNEV-EAAAGRSISEIFAELGEPAFRDGERRVIARLLDEPPHVLATGGGAFVNAETR 118
Query: 182 ALLRH-GISLWIDVPPGMVAR 201
AL+ +S+W+ ++AR
Sbjct: 119 ALINEKAVSVWLKADVELLAR 139
>gi|27375299|ref|NP_766828.1| shikimate kinase [Bradyrhizobium japonicum USDA 110]
gi|27348435|dbj|BAC45453.1| bll0188 [Bradyrhizobium japonicum USDA 110]
Length = 244
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 2/109 (1%)
Query: 85 ADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRES 144
ADI + L S+ LVGM K+ +G+ +A L+ + D+D+ + EAA G + + F
Sbjct: 51 ADILSALGARSIVLVGMMGVGKSTIGRRMAARLKLPFVDADTEI-EAAAGMTIPEIFERH 109
Query: 145 DEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLA-LLRHGISLWI 192
E ++ E V+ +L G +V+ G GA A + +S+W+
Sbjct: 110 GEGHFRDGEARVIARLLDGGPVVLATGGGAFMREETRARIAAKAVSIWL 158
>gi|407773807|ref|ZP_11121107.1| shikimate kinase [Thalassospira profundimaris WP0211]
gi|407283253|gb|EKF08794.1| shikimate kinase [Thalassospira profundimaris WP0211]
Length = 213
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 58/109 (53%), Gaps = 2/109 (1%)
Query: 85 ADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRES 144
A I LKG ++ +G+ A K+ +G+ +A L+ + D+D + EAAG S A F+
Sbjct: 26 AKIRDGLKGRTLVFIGLMGAGKSCIGRMVAKELKLDFVDADREIEEAAGC-SIADIFKLY 84
Query: 145 DEKGYQQAETEVLKQLSSMGRLVVCAGNGA-VQSSANLALLRHGISLWI 192
E+ ++ E V+ +L ++V+ G GA ++ +L +S+W+
Sbjct: 85 GEEAFRDGEERVIARLLDGEQIVLATGGGAFIRERTRQLILEKSVSVWL 133
>gi|302389883|ref|YP_003825704.1| 3-dehydroquinate dehydratase [Thermosediminibacter oceani DSM
16646]
gi|302200511|gb|ADL08081.1| 3-dehydroquinate dehydratase, type II [Thermosediminibacter oceani
DSM 16646]
Length = 346
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 75/151 (49%), Gaps = 15/151 (9%)
Query: 94 TSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAE 153
T++ L+G + KT +GK LA+ L + D+D L+ + G E ++ F + E+ ++ E
Sbjct: 5 TNIVLIGFMGSGKTSIGKMLAEKLGKRFLDTDELIRQECGME-ISEIFHKFGEEYFRNKE 63
Query: 154 TEVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVPP--------GMVARMDH 204
E +++ ++ V+ G G V + N+ LR GI +W+ G +R
Sbjct: 64 KETVERAAAREGTVIATGGGVVLNPENMEKLRRSGIIVWLRASEEEILQRISGDASRPLA 123
Query: 205 SGFPESEVLPQLFALYKEMRDGYAT-ADVTV 234
S ESE+L +Y + + YAT AD+ +
Sbjct: 124 SNKSESEILE----IYSKRLNLYATYADIII 150
>gi|160915147|ref|ZP_02077360.1| hypothetical protein EUBDOL_01155 [Eubacterium dolichum DSM 3991]
gi|158432946|gb|EDP11235.1| shikimate kinase [Eubacterium dolichum DSM 3991]
Length = 422
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 58/100 (58%), Gaps = 2/100 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L+GM +A K+ + K L+ A++ Y DSD + + +S + F + E G++Q E
Sbjct: 255 NIVLIGMPSAGKSSIAKELSKAMQMTYLDSDEEIVKTYR-QSIPEIFTQEGEAGFRQKEQ 313
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANL-ALLRHGISLWID 193
++ ++ V+ G GA+ + AN+ AL ++GI +++D
Sbjct: 314 AIIASIALRNHCVLATGGGAILNEANMNALAQNGIIVFLD 353
>gi|56696518|ref|YP_166875.1| shikimate kinase [Ruegeria pomeroyi DSS-3]
gi|81350011|sp|Q5LSY0.1|AROK_SILPO RecName: Full=Shikimate kinase; Short=SK
gi|56678255|gb|AAV94921.1| shikimate kinase [Ruegeria pomeroyi DSS-3]
Length = 195
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+V +VGM A KT +G+ LA L + DSD+ + E+A S + F E ++ E+
Sbjct: 22 TVVMVGMMGAGKTAVGRALAQRLGVPFLDSDAEI-ESAANMSIPEIFERDGEAFFRDRES 80
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALL-RHGISLWI 192
V+ +L V+ G GA + AN ++ HG+S+W+
Sbjct: 81 RVIARLLEGAPCVLSTGGGAFLAEANRRMISEHGVSVWL 119
>gi|386285836|ref|ZP_10063043.1| shikimate kinase [gamma proteobacterium BDW918]
gi|385281110|gb|EIF45015.1| shikimate kinase [gamma proteobacterium BDW918]
Length = 178
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
+K +VFLVG A K+ +G+ LA+ LR+ + D D + E +G + F E+G++
Sbjct: 2 MKSGAVFLVGPMGAGKSTIGRLLAETLRFEFCDVDREIEERSGVD-IPWIFDMEGEEGFR 60
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALL 184
E +L +LS ++V+ G GAV S + L+
Sbjct: 61 DREESMLSELSDGSQVVISTGGGAVLRSVSRKLM 94
>gi|225024351|ref|ZP_03713543.1| hypothetical protein EIKCOROL_01226 [Eikenella corrodens ATCC
23834]
gi|224942848|gb|EEG24057.1| hypothetical protein EIKCOROL_01226 [Eikenella corrodens ATCC
23834]
Length = 184
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 2/108 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++F +G+ A KT GK LA L+ + DSD L+ + G S A F E G+++ E
Sbjct: 10 NIFFIGLMGAGKTTHGKQLAALLQRDFIDSDQLICQRT-GVSIATIFELEGEGGFRKREA 68
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMVAR 201
++ +L+ +++ G GAV S N L G +++ P ++ R
Sbjct: 69 AIIDELTRRHPIILATGGGAVLSPDNCHCLHTRGTVIYLHATPEILYR 116
>gi|325577495|ref|ZP_08147857.1| shikimate kinase [Haemophilus parainfluenzae ATCC 33392]
gi|325160599|gb|EGC72723.1| shikimate kinase [Haemophilus parainfluenzae ATCC 33392]
Length = 180
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 57/100 (57%), Gaps = 2/100 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L + DSD+++ E AG + + F E+G+++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRQLAQQLNMDFVDSDAVIEERAGAD-ISWIFDLEGEEGFRKREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
++ +L+ + +V+ G GAV S N L GI ++++
Sbjct: 65 RIINELTQLQGVVLSTGGGAVMSKENRNYLSARGIVIYLE 104
>gi|254516136|ref|ZP_05128196.1| shikimate kinase [gamma proteobacterium NOR5-3]
gi|219675858|gb|EED32224.1| shikimate kinase [gamma proteobacterium NOR5-3]
Length = 180
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 77/165 (46%), Gaps = 19/165 (11%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
VFLVG A KT +GK LA L+ + DSDS + E G A F E+G++ E
Sbjct: 17 VFLVGPMGAGKTTIGKLLARGLKLGFADSDSEI-ETRTGADIAWIFDVEGEEGFRDREES 75
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALL-RHGISLWIDVPPGMVAR---------MDHS 205
V+ +++ + V+ G G V AN +L G +++ R + +
Sbjct: 76 VIDEMTLLDHTVLATGGGVVMREANRRVLSSRGFVIYLHATLDEQIRRTRGDRNRPLLNG 135
Query: 206 GFPESEVLPQLFAL----YKEMRDGYATADVT---VSLQKVASQL 243
PES VL +LFA+ Y+E+ D D + V Q++ +QL
Sbjct: 136 DDPES-VLRELFAVRDPYYREIADHVIDTDSSSPKVIAQRLLTQL 179
>gi|420157803|ref|ZP_14664631.1| shikimate kinase [Clostridium sp. MSTE9]
gi|394755631|gb|EJF38830.1| shikimate kinase [Clostridium sp. MSTE9]
Length = 174
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L G + KT +G+ LA +FD D + E G++ ++ F + E+ +++ ET
Sbjct: 4 NIVLCGFMGSGKTTVGQVLAQKSGRRFFDLDQYI-EQRQGKTISQIFADEGEQTFRRLET 62
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
E ++LSS LV+ G GAV N+ +LR +G+ + +D
Sbjct: 63 EAARKLSSQKDLVIATGGGAVLREENVDILRQNGVIVLLD 102
>gi|399019199|ref|ZP_10721348.1| 3-dehydroquinate synthase [Herbaspirillum sp. CF444]
gi|398098346|gb|EJL88633.1| 3-dehydroquinate synthase [Herbaspirillum sp. CF444]
Length = 567
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
S+FLVG+ A KT +G+ LA L + DSD + E+ G S F E+ +++ E
Sbjct: 4 SIFLVGLMGAGKTTIGRALAKKLNKRFVDSDHEI-ESRTGASIPVIFEIEGEESFRKREA 62
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRH 186
+V+++LS+ +V+ G GA+ + A L+
Sbjct: 63 DVIRELSAQQDIVLATGGGAILRAETRAYLKQ 94
>gi|152980219|ref|YP_001355053.1| bifunctional shikimate kinase/3-dehydroquinate synthase
[Janthinobacterium sp. Marseille]
gi|151280296|gb|ABR88706.1| bifunctional shikimate kinase/3-dehydroquinate synthase
[Janthinobacterium sp. Marseille]
Length = 577
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 93 GTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQA 152
G ++FLVG+ A KT +G+ LA L + DSD + E G + F E ++Q
Sbjct: 22 GGNIFLVGLMGAGKTTVGRALAKKLNKRFIDSDHEIEERTGA-TIPLIFEIEGEASFRQR 80
Query: 153 ETEVLKQLSSMGRLVVCAGNGAVQSSANLALLR 185
E EV++ L++ +V+ G GAV ++ + A L+
Sbjct: 81 EAEVIRDLTAQQDIVLATGGGAVLNAESRAYLK 113
>gi|115312137|sp|Q89XW7.2|AROK_BRAJA RecName: Full=Shikimate kinase; Short=SK
Length = 207
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 2/109 (1%)
Query: 85 ADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRES 144
ADI + L S+ LVGM K+ +G+ +A L+ + D+D+ + EAA G + + F
Sbjct: 14 ADILSALGARSIVLVGMMGVGKSTIGRRMAARLKLPFVDADTEI-EAAAGMTIPEIFERH 72
Query: 145 DEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLA-LLRHGISLWI 192
E ++ E V+ +L G +V+ G GA A + +S+W+
Sbjct: 73 GEGHFRDGEARVIARLLDGGPVVLATGGGAFMREETRARIAAKAVSIWL 121
>gi|390935043|ref|YP_006392548.1| shikimate kinase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
gi|389570544|gb|AFK86949.1| Shikimate kinase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
Length = 171
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 84/173 (48%), Gaps = 12/173 (6%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L G KT +GK +AD L + + D+D L+ E G + F + EK ++ E
Sbjct: 3 NIALTGFMATGKTVVGKRVADILSFSFIDTDDLI-EKISGMKIPEIFDKYGEKYFRGIEK 61
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMVARM--DHSGFP--- 208
+ + S + V+ G G V + +N+ LR HG+ + + P ++ R D+ P
Sbjct: 62 IAVARASRLKNHVISTGGGVVLNPSNIVQLRKHGVVICLKANPEVILRNIGDNDKRPILA 121
Query: 209 ESEVLPQLFALYKEMRDGYATADVTVSLQKVASQLGYDDLDAVTTEDMTLEVK 261
+V ++ AL E + Y AD T+ + S + +D+ A+T D+ ++K
Sbjct: 122 TGDVYEKIKALLAERQHYYEFADYTIDV----SNMSINDV-ALTVVDVYSKLK 169
>gi|307731210|ref|YP_003908434.1| shikimate kinase [Burkholderia sp. CCGE1003]
gi|307585745|gb|ADN59143.1| Shikimate kinase [Burkholderia sp. CCGE1003]
Length = 182
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+VF VG+ A KT +G+ +A L +FDSD + EA G F E G+++ E
Sbjct: 9 NVFFVGLMGAGKTTVGRAIARRLDRPFFDSDHEI-EARTGARIPVIFELEGEAGFREREA 67
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPP 196
V+ +L+ +V+ G GAV N A L+ G+ +++ P
Sbjct: 68 SVISELTGRDNIVLATGGGAVLRPENRAALQSRGVVIYLRANP 110
>gi|448240744|ref|YP_007404797.1| shikimate kinase II [Serratia marcescens WW4]
gi|445211108|gb|AGE16778.1| shikimate kinase II [Serratia marcescens WW4]
gi|453062500|gb|EMF03491.1| shikimate kinase II [Serratia marcescens VGH107]
Length = 174
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 70/135 (51%), Gaps = 8/135 (5%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++F++G A KT +G+ LA AL Y + D+D L + A S A+ G+++ ET
Sbjct: 4 TLFMIGARGAGKTTVGRALALALGYQFVDTD-LFMQQAAQMSVAEMVEREGWLGFRRRET 62
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMVA-RMDHSGFPESEV 212
L+ ++ +V G GA+ + N +R HG +++ P ++A R++ +PE
Sbjct: 63 VALQTVTKPS-TIVATGGGAILAEENRQFMRQHGTVIYLRAPASVLAQRLEE--YPEDAQ 119
Query: 213 LPQLFA--LYKEMRD 225
P L + +EMR+
Sbjct: 120 RPTLTGRPIAEEMRE 134
>gi|32472535|ref|NP_865529.1| shikimate kinase II [Rhodopirellula baltica SH 1]
gi|77416377|sp|Q7UU71.1|AROK_RHOBA RecName: Full=Shikimate kinase; Short=SK
gi|32443771|emb|CAD73213.1| Shikimate kinase II [Rhodopirellula baltica SH 1]
Length = 187
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 55/115 (47%), Gaps = 3/115 (2%)
Query: 90 ELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGY 149
E+K ++L G K+ L K LA L D D V E G+S A+ F E G+
Sbjct: 5 EVKPQHLYLTGYRGCGKSTLAKLLAQKLSLPSVDLDD-VIETTAGKSIAEIFANETEVGF 63
Query: 150 QQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVPPG-MVARM 202
+ E L ++S + V+ G G + AN ++ + G +W+D P +VAR+
Sbjct: 64 RDREEAALMEVSRRPQHVIALGGGTILREANRNIIANSGWCVWLDAEPDVLVARL 118
>gi|50086333|ref|YP_047843.1| shikimate kinase [Acinetobacter sp. ADP1]
gi|60389578|sp|Q6F7E4.1|AROK_ACIAD RecName: Full=Shikimate kinase; Short=SK
gi|49532309|emb|CAG70021.1| shikimate-kinase [Acinetobacter sp. ADP1]
Length = 180
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+++LVG A KT +G+ LA+ L + DSD + E G + F + E G++ ET
Sbjct: 11 NIYLVGPMGAGKTTVGRHLAELLGREFLDSDHEI-ERRTGATIPWIFEKEGEIGFRSRET 69
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVP 195
VL L+S LV+ G G V AN + L+ G+ +++ P
Sbjct: 70 IVLDDLTSRRDLVLATGGGVVTQPANRSYLKTRGVVVYLYTP 111
>gi|419845256|ref|ZP_14368534.1| shikimate kinase 1 [Haemophilus parainfluenzae HK2019]
gi|386416179|gb|EIJ30689.1| shikimate kinase 1 [Haemophilus parainfluenzae HK2019]
Length = 180
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 57/100 (57%), Gaps = 2/100 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L + DSD+++ E AG + + F E+G+++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRQLAQQLNMDFVDSDAVIEERAGAD-ISWIFDLEGEEGFRKREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
++ +L+ + +V+ G GAV S N L GI ++++
Sbjct: 65 RIINELTQLQGVVLSTGGGAVMSKENRNYLSARGIVIYLE 104
>gi|392961683|ref|ZP_10327138.1| Shikimate kinase [Pelosinus fermentans DSM 17108]
gi|421055597|ref|ZP_15518559.1| shikimate kinase [Pelosinus fermentans B4]
gi|421058775|ref|ZP_15521433.1| Shikimate kinase [Pelosinus fermentans B3]
gi|421067547|ref|ZP_15529011.1| Shikimate kinase [Pelosinus fermentans A12]
gi|421072617|ref|ZP_15533726.1| Shikimate kinase [Pelosinus fermentans A11]
gi|392439362|gb|EIW17073.1| shikimate kinase [Pelosinus fermentans B4]
gi|392445817|gb|EIW23128.1| Shikimate kinase [Pelosinus fermentans A11]
gi|392449172|gb|EIW26322.1| Shikimate kinase [Pelosinus fermentans A12]
gi|392453523|gb|EIW30399.1| Shikimate kinase [Pelosinus fermentans DSM 17108]
gi|392460183|gb|EIW36517.1| Shikimate kinase [Pelosinus fermentans B3]
Length = 177
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 73/137 (53%), Gaps = 5/137 (3%)
Query: 94 TSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAE 153
+V L+GM + KT LG +A+ L ++D D + E ++ ++ F E ++Q E
Sbjct: 5 NNVVLIGMPGSGKTSLGSIIAERLEIDFYDIDQYIQEKEN-KTISELFLLG-ESHFRQIE 62
Query: 154 TEVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVPPGMVAR-MDHSGFPESE 211
+ ++++SS +V+ G G V N+A+L+ G +ID P M+ +D + P E
Sbjct: 63 SNAVREVSSKKPIVIATGGGVVTRPENIAVLQQKGTIFYIDRPIEMIIETIDAAARPLLE 122
Query: 212 -VLPQLFALYKEMRDGY 227
+ ++++LY++ + Y
Sbjct: 123 DNVKRIYSLYEQRKHLY 139
>gi|333398578|ref|ZP_08480391.1| shikimate kinase [Leuconostoc gelidum KCTC 3527]
gi|406600077|ref|YP_006745423.1| shikimate kinase [Leuconostoc gelidum JB7]
gi|406371612|gb|AFS40537.1| shikimate kinase [Leuconostoc gelidum JB7]
Length = 266
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L+G A KT +GK +A + D DS + E G++ ++ F E G++Q ET
Sbjct: 7 TLMLIGFMGAGKTTVGKEIARQHHSKFLDIDSEI-ERVAGQTISEIFETRGEVGFRQLET 65
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRH 186
EVL + + + +V G G V+ NL +L+H
Sbjct: 66 EVLNDVQTF-KGIVATGGGVVERQENLEVLQH 96
>gi|257464987|ref|ZP_05629358.1| shikimate kinase [Actinobacillus minor 202]
gi|257450647|gb|EEV24690.1| shikimate kinase [Actinobacillus minor 202]
Length = 173
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L +FDSDS++ E AG + F E G+++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRQLAQMLGMEFFDSDSVIEERAGAD-IDWIFDVEGEAGFRKREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
++ +L+ +V+ G G+V S N +L GI ++++
Sbjct: 65 RIINELTQGQGIVLSTGGGSVLSKDNRNMLSARGIVIYLE 104
>gi|168204595|ref|ZP_02630600.1| shikimate kinase [Clostridium perfringens E str. JGS1987]
gi|170663856|gb|EDT16539.1| shikimate kinase [Clostridium perfringens E str. JGS1987]
Length = 167
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 81/170 (47%), Gaps = 18/170 (10%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
+K V L+GM A KT +G+ L+ L+ + D D + E + G+ + F + +E ++
Sbjct: 1 MKKRGVLLIGMPGAGKTTIGRELSKVLKMNFLDMDEFI-ERSTGKEIKELFAQGEEV-FR 58
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVAR-MDHSGFP- 208
E++ + LS + +V+ +G G V N+ + I+++I+ P ++ +D G P
Sbjct: 59 DLESKSCELLSILKNVVISSGGGIVTREENMGNFKEFITVFINRPLDLIMEDIDTEGRPL 118
Query: 209 ---ESEVLPQLFA----LYKE------MRDGYATADVTVSLQKVASQLGY 245
E L L+ LYK+ + DG T + + K S+L Y
Sbjct: 119 LWDGKERLTNLYRDRIDLYKKHSDIEIINDG-TTKEAIREIVKAISELSY 167
>gi|152977949|ref|YP_001343578.1| shikimate kinase [Actinobacillus succinogenes 130Z]
gi|171472930|sp|A6VKZ6.1|AROK_ACTSZ RecName: Full=Shikimate kinase; Short=SK
gi|150839672|gb|ABR73643.1| Shikimate kinase [Actinobacillus succinogenes 130Z]
Length = 175
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L +FDSDS++ E AG E + F E G+++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRQLAQQLGMEFFDSDSVIEERAGAE-ISWIFDIEGENGFRKREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSAN 180
++ +L+ +V+ G G V S N
Sbjct: 65 RIINELTQKQGIVLSTGGGVVLSKEN 90
>gi|345428828|ref|YP_004821944.1| shikimate kinase I [Haemophilus parainfluenzae T3T1]
gi|301154887|emb|CBW14350.1| shikimate kinase I [Haemophilus parainfluenzae T3T1]
Length = 180
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 57/100 (57%), Gaps = 2/100 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L + DSD+++ E AG + + F E+G+++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRQLAQQLNMDFVDSDAVIEERAGAD-ISWIFDLEGEEGFRKREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
++ +L+ + +V+ G GAV S N L GI ++++
Sbjct: 65 RIINELTQLQGVVLSTGGGAVMSKENRNYLSARGIVIYLE 104
>gi|397906470|ref|ZP_10507270.1| Shikimate kinase I # AroE I [Caloramator australicus RC3]
gi|397160427|emb|CCJ34607.1| Shikimate kinase I # AroE I [Caloramator australicus RC3]
Length = 166
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L+GM KT +G+ LA+ L YY+ D D + E G F EK +++ E+
Sbjct: 3 NISLIGMPGCGKTTIGRILAEGLGYYFVDLDEYI-ENKCGMRIDYIFENLGEKFFRKLES 61
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR 185
E LK++ + + V+ G G + N+ +LR
Sbjct: 62 ESLKEIIAGSKKVIATGGGVITVEENIKILR 92
>gi|312135449|ref|YP_004002787.1| shikimate kinase [Caldicellulosiruptor owensensis OL]
gi|311775500|gb|ADQ04987.1| Shikimate kinase [Caldicellulosiruptor owensensis OL]
Length = 172
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L G + KT +GK +A+ L D+DS V + G + K F EK +++ ET
Sbjct: 3 NIVLTGFMGSGKTTIGKLIAEKLDIELVDTDSEVIKELGM-TIDKIFEVHGEKKFREVET 61
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRHG 187
+V++++S +V+ G G V + N+ LLR
Sbjct: 62 KVIERISKYENVVISTGGGVVLNPENVKLLREN 94
>gi|451947300|ref|YP_007467895.1| shikimate kinase [Desulfocapsa sulfexigens DSM 10523]
gi|451906648|gb|AGF78242.1| shikimate kinase [Desulfocapsa sulfexigens DSM 10523]
Length = 177
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
SV+L+G K+ +G LA L Y +FD+D+L+ + G S A+ + +++ E
Sbjct: 4 SVYLIGGRAVGKSSIGVRLARKLGYRFFDTDTLITDECGC-SVAEIVARDGWQSFREHEK 62
Query: 155 EVLKQLSSMGRLVVCAGNGAV-QSSANLALLRHGISLWI 192
VL+QL VV G GA+ L L + GI +W+
Sbjct: 63 HVLRQLGLQKSCVVATGGGAILHREQWLELKKLGIVIWL 101
>gi|388455891|ref|ZP_10138186.1| shikimate kinase I [Fluoribacter dumoffii Tex-KL]
Length = 175
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
+K ++FL+G A K+ +G+ LA L+ +FDSD ++ E AG + + F E+G++
Sbjct: 4 VKVRNIFLIGPMGAGKSTIGRALAKELKLEFFDSDEVIEERAGADISW-IFDIEGEEGFR 62
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSAN 180
+ E +V+++L+ +V+ G G V + N
Sbjct: 63 RREQKVIEELTQKTNIVLATGGGVVITPEN 92
>gi|292493846|ref|YP_003529285.1| shikimate kinase [Nitrosococcus halophilus Nc4]
gi|291582441|gb|ADE16898.1| Shikimate kinase [Nitrosococcus halophilus Nc4]
Length = 182
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A KT LG++LA L + DSD + E G S F E G++Q E
Sbjct: 4 NIFLVGPMGAGKTTLGRYLAKMLGRKFHDSDREI-ECRTGVSIPVIFEIEGEAGFRQREC 62
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRHG 187
+++ +L+ + +++ G GAV + N L G
Sbjct: 63 KMIAELTQLSNIILATGGGAVLAIENRQRLAQG 95
>gi|444356106|ref|ZP_21157812.1| shikimate kinase [Burkholderia cenocepacia BC7]
gi|444366872|ref|ZP_21166879.1| shikimate kinase [Burkholderia cenocepacia K56-2Valvano]
gi|443603852|gb|ELT71831.1| shikimate kinase [Burkholderia cenocepacia K56-2Valvano]
gi|443607610|gb|ELT75294.1| shikimate kinase [Burkholderia cenocepacia BC7]
Length = 190
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+VF VG+ A KT +G+ +A L +FDSD + EA G F E G++ ET
Sbjct: 15 NVFFVGLMGAGKTTVGRAVARRLDRTFFDSDHEI-EARTGARIPVIFELEGEAGFRDRET 73
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPP 196
+V+ L+ +V+ G GAV N L+ +GI +++ P
Sbjct: 74 QVIADLTQRENIVLATGGGAVLRPENRDSLKTNGIVVYLRANP 116
>gi|302871544|ref|YP_003840180.1| shikimate kinase [Caldicellulosiruptor obsidiansis OB47]
gi|302574403|gb|ADL42194.1| Shikimate kinase [Caldicellulosiruptor obsidiansis OB47]
Length = 172
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L G + KT +GK +A+ L D+DS V + G + K F EK +++ ET
Sbjct: 3 NIVLTGFMGSGKTTIGKLIAEKLDIELIDTDSEVIKELGM-TIDKIFEVYGEKKFREVET 61
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRHG 187
V++++S + +V+ G G V + N+ LLR
Sbjct: 62 MVIERVSKLENVVISTGGGVVLNPENVKLLREN 94
>gi|300173408|ref|YP_003772574.1| shikimate kinase [Leuconostoc gasicomitatum LMG 18811]
gi|333447568|ref|ZP_08482510.1| shikimate kinase [Leuconostoc inhae KCTC 3774]
gi|299887787|emb|CBL91755.1| shikimate kinase [Leuconostoc gasicomitatum LMG 18811]
Length = 266
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L+G A KT +GK +A + D DS + E G++ ++ F E G++Q ET
Sbjct: 7 TLMLIGFMGAGKTTVGKEIARQHHSKFLDIDSEI-ERVAGQTISEIFETRGEVGFRQLET 65
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRH 186
EVL + + +V G G V+ NL +L+H
Sbjct: 66 EVLNDVQTFNG-IVATGGGVVERQENLEVLQH 96
>gi|119505542|ref|ZP_01627614.1| shikimate kinase [marine gamma proteobacterium HTCC2080]
gi|119458651|gb|EAW39754.1| shikimate kinase [marine gamma proteobacterium HTCC2080]
Length = 172
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+FLVG A K+ +G+ LA L + + DSD+ + EA G F E G++ ET+
Sbjct: 1 MFLVGPMGAGKSTVGRALAQILGFEFVDSDAEI-EARTGADIPWIFEIEGESGFRDRETK 59
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALL-RHGISLWID 193
V+++++S +V+ G GA+ N ++L R G ++++
Sbjct: 60 VIEEVTSRDTVVMATGGGAILRGENRSVLSRRGFVVYLE 98
>gi|374856713|dbj|BAL59566.1| 3-dehydroquinate synthase [uncultured candidate division OP1
bacterium]
Length = 582
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 59/108 (54%), Gaps = 2/108 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+++L+G+ + K+ +G+ LA L + D D + AG + ++ F E+G++ E+
Sbjct: 12 NIYLLGVMGSGKSTVGRLLACVLGRDFLDLDEEIVTRAGC-TISQIFEREGEQGFRARES 70
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVPPGMVAR 201
VL+++ VV G GAV N L+R GIS+++ P ++A+
Sbjct: 71 AVLREVVQRKNSVVALGGGAVLKDENWELVRQTGISIYLKARPEILAQ 118
>gi|358010319|ref|ZP_09142129.1| shikimate kinase [Acinetobacter sp. P8-3-8]
Length = 163
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 106 KTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEVLKQLSSMGR 165
KT +G+ LA+ L + DSD + E G S F + E+G++ ET V+ L+S
Sbjct: 5 KTTVGRHLAELLGREFLDSDHEI-ERKTGASIPWIFEKEGEQGFRTRETIVIDDLTSKKN 63
Query: 166 LVVCAGNGAVQSSANLALLRH-GISLWIDVP 195
LVV G GAV N L+H GI +++ P
Sbjct: 64 LVVATGGGAVTQVMNREYLKHRGIVIYLYTP 94
>gi|251778427|ref|ZP_04821347.1| shikimate kinase [Clostridium botulinum E1 str. 'BoNT E Beluga']
gi|243082742|gb|EES48632.1| shikimate kinase [Clostridium botulinum E1 str. 'BoNT E Beluga']
Length = 165
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 69/140 (49%), Gaps = 5/140 (3%)
Query: 94 TSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAE 153
VFL+GM K+ +G+ ++ L + D D + E ++ ++ F E E ++ E
Sbjct: 3 NKVFLIGMPGCGKSTIGELISKELLLKFIDMD-IYIEEKTSKTISELF-EQGEDYFRDIE 60
Query: 154 TEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVP-PGMVARMDHSGFP-ES 210
+E K++ +V+ G G V+ N+ L+ +G+ ++ID P +++ +D S P
Sbjct: 61 SEACKEIIKYDNVVIATGGGVVKKDINVETLKNNGLVIFIDRPVEKIISDIDVSRRPLLK 120
Query: 211 EVLPQLFALYKEMRDGYATA 230
++ LYKE D Y A
Sbjct: 121 NGKERIIGLYKERYDIYKKA 140
>gi|421074271|ref|ZP_15535309.1| Shikimate kinase [Pelosinus fermentans JBW45]
gi|392527631|gb|EIW50719.1| Shikimate kinase [Pelosinus fermentans JBW45]
Length = 180
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 83/158 (52%), Gaps = 10/158 (6%)
Query: 94 TSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAE 153
++ L+GM + KT LG +A+ L ++D D + + ++ ++ F E ++Q E
Sbjct: 5 NNIVLIGMPGSGKTSLGAIIAERLELDFYDIDQYI-QKKENKTISELFLLG-ESHFRQIE 62
Query: 154 TEVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVPPGMVAR-MDHSGFP-ES 210
+ ++++SS +V+ G G V N+A+L+ G +ID P M+ +D + P +
Sbjct: 63 SNAVREVSSKKPIVIATGGGVVTRPENIAVLQQKGTIFYIDRPIEMIIETIDVAARPLLA 122
Query: 211 EVLPQLFALY---KEMRDGYATADVT--VSLQKVASQL 243
+ + ++++LY K + +G+ +T +SL A Q+
Sbjct: 123 DNVKRIYSLYEQRKHLYEGHCHYRITNGLSLHSAADQI 160
>gi|334143176|ref|YP_004536332.1| shikimate kinase [Thioalkalimicrobium cyclicum ALM1]
gi|333964087|gb|AEG30853.1| Shikimate kinase [Thioalkalimicrobium cyclicum ALM1]
Length = 175
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
S+FLVG A K+ +G+ LA+ L Y + DSD + EA G + F E G++ ET
Sbjct: 5 SIFLVGPMGAGKSTVGRILAEKLGYDFMDSDHEI-EARTGVTIPVIFDIEGEAGFRARET 63
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSAN 180
V+ ++ LV+ G GAV S+ N
Sbjct: 64 TVIDDITQQPGLVLATGGGAVLSAEN 89
>gi|414169095|ref|ZP_11424932.1| shikimate kinase [Afipia clevelandensis ATCC 49720]
gi|410885854|gb|EKS33667.1| shikimate kinase [Afipia clevelandensis ATCC 49720]
Length = 204
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 1/111 (0%)
Query: 83 KAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFR 142
+ ADI L G V LVGM + K+ +G+ L L + D+D + A G S ++ F
Sbjct: 14 READIVAALHGRPVVLVGMMGSGKSTIGRRLGARLHMPFLDADHEIEVAHAGMSVSEIFA 73
Query: 143 ESDEKGYQQAETEVLKQLSSMGRLVVCAGNGA-VQSSANLALLRHGISLWI 192
+ E ++ E V+ +L G V+ G GA ++ + +S+W+
Sbjct: 74 QHGEPYFRDGEARVIARLLEGGSCVIATGGGAFMREETRNRIHDKAVSIWL 124
>gi|288942751|ref|YP_003444991.1| Shikimate kinase [Allochromatium vinosum DSM 180]
gi|288898123|gb|ADC63959.1| Shikimate kinase [Allochromatium vinosum DSM 180]
Length = 174
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 76/155 (49%), Gaps = 8/155 (5%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
L+ ++F+VG A K+ +G+ LA+AL Y + DSD + + G F E G++
Sbjct: 2 LRAQNIFIVGPMGAGKSTVGRQLAEALSYTFKDSDHEI-QRRTGVDIPTIFEFEGESGFR 60
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLA-LLRHGISLWIDVPP----GMVARMDHS 205
E +V+++L + R+V+ G GAV + N L G+ +++ P AR +
Sbjct: 61 ARERQVIEELVAEERIVLATGGGAVLNPENRQDLSARGVVIYLHCSPEQQYARTARDRNR 120
Query: 206 GFPESE-VLPQLFALYKEMRDGY-ATADVTVSLQK 238
E+E L +L + E Y AD+ VS +K
Sbjct: 121 PLLETEDPLNRLREIMAEREPLYRQVADLVVSTEK 155
>gi|51893087|ref|YP_075778.1| shikimate kinase [Symbiobacterium thermophilum IAM 14863]
gi|81388659|sp|Q67N09.1|AROK_SYMTH RecName: Full=Shikimate kinase; Short=SK
gi|51856776|dbj|BAD40934.1| shikimate kinase [Symbiobacterium thermophilum IAM 14863]
Length = 174
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 58/103 (56%), Gaps = 2/103 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ LVG+ + KT +G+ LA+ L + D+D LV EA G + A F E+G+++ E
Sbjct: 2 NIVLVGLMGSGKTAVGRLLAERLGRPFVDTDRLV-EADAGRTVADIFAAEGEEGFRRREA 60
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANL-ALLRHGISLWIDVPP 196
EV+ + ++ V+ G GAV + N AL R G +W+D P
Sbjct: 61 EVVARAAAGDNQVIATGGGAVLRTENREALRRTGFVIWLDAEP 103
>gi|400754280|ref|YP_006562648.1| shikimate kinase AroK [Phaeobacter gallaeciensis 2.10]
gi|398653433|gb|AFO87403.1| shikimate kinase AroK [Phaeobacter gallaeciensis 2.10]
Length = 196
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 73/146 (50%), Gaps = 7/146 (4%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ +VGM A KT +G+ LA L+ + DSD + EAA + + F E +++ E
Sbjct: 23 TIVMVGMMGAGKTAVGRALAARLQAPFLDSDHEI-EAAANRTIPEIFARDGELFFRKKER 81
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALL-RHGISLWIDVPPGMV-ARMDHSG----FP 208
+V+++L R V+ G GA + N ++ G+++W++ ++ R+ H
Sbjct: 82 QVIRRLLDEERGVLSTGGGAFLAEENRQIISERGVAIWLNADLEVLWNRVKHRDTRPLLR 141
Query: 209 ESEVLPQLFALYKEMRDGYATADVTV 234
+ L ALY + YA AD+TV
Sbjct: 142 TEDPHATLSALYHDRVPYYAQADLTV 167
>gi|196232000|ref|ZP_03130856.1| Shikimate kinase [Chthoniobacter flavus Ellin428]
gi|196224122|gb|EDY18636.1| Shikimate kinase [Chthoniobacter flavus Ellin428]
Length = 173
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Query: 94 TSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAE 153
++ +G + KT +G+ +A L + + D+D++V E AG + ++ F E ++ E
Sbjct: 3 NNIVFIGFMGSGKTSVGRLVAQRLGFQFVDTDAVVVERAGMQ-ISEIFARHGEPWFRDHE 61
Query: 154 TEVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWI 192
T L LS + R V+ G G V N ALL+ G +W+
Sbjct: 62 TSALSSLSILNRSVISTGGGIVLRPQNRALLQELGFVVWL 101
>gi|218779610|ref|YP_002430928.1| shikimate kinase [Desulfatibacillum alkenivorans AK-01]
gi|218760994|gb|ACL03460.1| Shikimate kinase [Desulfatibacillum alkenivorans AK-01]
Length = 176
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+++L+G KT +GK LA A+ + D+D + E G + A+ + +++ E
Sbjct: 3 NIYLIGYRATGKTTVGKALAAAMDRPFVDADEM-LEREQGRTIAEIVEAGGWEEFRRLEK 61
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANL-ALLRHGISLWIDVPPGMVA 200
E+LK+LS + R ++ G GA+ N+ A+ G+ +W+ P ++
Sbjct: 62 ELLKRLSGLDRHIIAPGGGAILDPDNVQAMQGSGLVVWLTADPKVIC 108
>gi|103487283|ref|YP_616844.1| shikimate kinase [Sphingopyxis alaskensis RB2256]
gi|98977360|gb|ABF53511.1| shikimate kinase [Sphingopyxis alaskensis RB2256]
Length = 191
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 75/158 (47%), Gaps = 13/158 (8%)
Query: 87 ISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDE 146
I ++ S+ LVG+ + K+ +G+ LA LR + D+D + E A G + A F E
Sbjct: 16 IPASIRDRSIVLVGLMGSGKSTVGRRLAQRLRMRFADADDEI-ERAAGMTIADIFARFGE 74
Query: 147 KGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLAL-LRHGISLWIDVP-PGMVARMD- 203
++ E V+ +L +V+ G GA + AL L+ + +W+D P +V R+
Sbjct: 75 THFRDGERRVIARLLGGKPMVLATGGGAFINDETRALILKDSLCIWLDADIPTLVERVGR 134
Query: 204 HSGFP------ESEVLPQLFALYKEMRDGYATADVTVS 235
S P EVL +L A+ + YA A + VS
Sbjct: 135 RSHRPLLKDRDPGEVLRELAAVRNPI---YAEAHLRVS 169
>gi|85373821|ref|YP_457883.1| shikimate kinase [Erythrobacter litoralis HTCC2594]
gi|84786904|gb|ABC63086.1| shikimate kinase [Erythrobacter litoralis HTCC2594]
Length = 189
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 15/150 (10%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
V LVG+ K+ +G+ LA ++ + D+D + EAA S ++ F E ++ E
Sbjct: 24 VVLVGLMGVGKSTVGRRLAKLMQRDFIDADDEIEEAA-QMSISEIFSAFGEDYFRDGERR 82
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLAL-LRHGISLWIDVP-PGMVAR--------MDHS 205
V+ +L G V+ G GA ++ AL L GI++WID P +V R +
Sbjct: 83 VIARLMGEGHGVIATGGGAFVNAETRALILDQGIAVWIDCDIPTLVERTGRRDTRPLLRQ 142
Query: 206 GFPESEVLPQLFALYKEMRDGYATADVTVS 235
G PE E+L + L++E Y+ A + VS
Sbjct: 143 GDPE-EILAR---LHREREKFYSQAPIRVS 168
>gi|409202515|ref|ZP_11230718.1| shikimate kinase I [Pseudoalteromonas flavipulchra JG1]
Length = 172
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ +AD L +FDSD + E G + F E+G+++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRHIADQLHLEFFDSDQEI-ERRTGADISWVFDIEGEEGFRKREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQS-SANLALLRHGISLWIDVP 195
V+ L+ M +V+ G G+V S L GI ++++ P
Sbjct: 65 SVISDLTEMQGIVLATGGGSVISKEVRNKLSARGIVVYLETP 106
>gi|53802349|ref|YP_112862.1| shikimate kinase [Methylococcus capsulatus str. Bath]
gi|81683002|sp|Q60BY3.1|AROK_METCA RecName: Full=Shikimate kinase; Short=SK
gi|53756110|gb|AAU90401.1| shikimate kinase [Methylococcus capsulatus str. Bath]
Length = 179
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FL+G A KT +G+ LA AL ++DSD + E G + F E G+++ E+
Sbjct: 6 NIFLIGPMGAGKTTVGRLLARALGMEFWDSDKEI-ERRTGVTVPMIFEYEGEAGFRRRES 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSAN 180
EV+ L+ R+V+ G G+V ++ N
Sbjct: 65 EVIADLTGKERIVLATGGGSVLAAEN 90
>gi|410084795|ref|ZP_11281516.1| Shikimate kinase III [Morganella morganii SC01]
gi|409768440|gb|EKN52500.1| Shikimate kinase III [Morganella morganii SC01]
Length = 177
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
++L+G A KT +GK LA AL Y + D+D+ V E S ++ +S + +++ E++
Sbjct: 10 IYLIGARGAGKTTVGKPLAQALLYDFIDTDACVTEQC-RMSISQLVEQSGWRSFRELESD 68
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLR 185
VL+Q+S RLV G G V + N A ++
Sbjct: 69 VLRQVSKPHRLVS-TGGGIVMAPENRAFMQ 97
>gi|206558685|ref|YP_002229445.1| shikimate kinase [Burkholderia cenocepacia J2315]
gi|198034722|emb|CAR50589.1| shikimate kinase I [Burkholderia cenocepacia J2315]
Length = 184
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+VF VG+ A KT +G+ +A L +FDSD + EA G F E G++ ET
Sbjct: 9 NVFFVGLMGAGKTTVGRAVARRLDRTFFDSDHEI-EARTGARIPVIFELEGEAGFRDRET 67
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPP 196
+V+ L+ +V+ G GAV N L+ +GI +++ P
Sbjct: 68 QVIADLTQRENIVLATGGGAVLRPENRDSLKTNGIVVYLRANP 110
>gi|306820204|ref|ZP_07453847.1| shikimate kinase [Eubacterium yurii subsp. margaretiae ATCC 43715]
gi|304551750|gb|EFM39698.1| shikimate kinase [Eubacterium yurii subsp. margaretiae ATCC 43715]
Length = 184
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 83/155 (53%), Gaps = 14/155 (9%)
Query: 80 VKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAK 139
++ K DI K T++ ++GM + KT L + LAD + + D DSL+ + S A+
Sbjct: 4 IRLKKEDIDLR-KKTNIAIIGMPGSGKTTLSEKLADLSKKDFVDVDSLIV-SENNISIAE 61
Query: 140 AFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANL-ALLRHGISLWIDVPPGM 198
F + E +++ E++++++LS M V+ G G V++ N+ L R+ I +++
Sbjct: 62 IFEKYGEAYFRKLESDMIQRLSLMDDTVISTGGGCVKNEDNINNLRRNAIIVYVKRD--- 118
Query: 199 VARMDHSGFPES----EVLPQLF----ALYKEMRD 225
+ +++ SG P S E + +LF ALY++ D
Sbjct: 119 LEKLETSGRPLSAGGLESVKKLFEERQALYEKYSD 153
>gi|83955535|ref|ZP_00964166.1| shikimate kinase [Sulfitobacter sp. NAS-14.1]
gi|83840179|gb|EAP79354.1| shikimate kinase [Sulfitobacter sp. NAS-14.1]
Length = 196
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+V +VGM A KT +G+ LA L + DSD + EAA + + F E +++ ET
Sbjct: 23 TVVMVGMMGAGKTAVGRALAAKLGVPFVDSDHEI-EAAANLTVPEIFERDGEPFFRKRET 81
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
EV+ +L ++ G GA + AN + G+S+W+D
Sbjct: 82 EVISRLLDKEPGILSTGGGAFLAEANRENISARGVSVWLD 121
>gi|386265435|ref|YP_005828927.1| shikimate kinase [Haemophilus influenzae R2846]
gi|309972671|gb|ADO95872.1| Shikimate kinase I [Haemophilus influenzae R2846]
Length = 180
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L + DSD+++ E G + + F E G+++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRQLAQQLNMDFIDSDAVIEERTGAD-ISWIFDLEGEDGFRKREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
++ +L+ M +V+ G GAV S N L GI ++++
Sbjct: 65 RIINELTQMQGIVLSTGGGAVLSKENRNYLSARGIVIYLE 104
>gi|84502969|ref|ZP_01001071.1| shikimate kinase [Oceanicola batsensis HTCC2597]
gi|84388714|gb|EAQ01585.1| shikimate kinase [Oceanicola batsensis HTCC2597]
Length = 181
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ +VGM A KT +G+ LA L + DSD + EAA S A+ F E ++ ET
Sbjct: 8 TIVMVGMMGAGKTAVGRALAAELGVPFLDSDHEI-EAAANMSIAEIFDRDGEAFFRARET 66
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
EV+++L V+ G GA + N L+ G+++W++
Sbjct: 67 EVIQRLLESAPCVLSTGGGAYLAERNRGLISDKGLAVWLN 106
>gi|392540434|ref|ZP_10287571.1| shikimate kinase I [Pseudoalteromonas piscicida JCM 20779]
Length = 172
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ +AD L +FDSD + E G + F E+G+++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRHIADQLHLEFFDSDQEI-ERRTGADISWVFDIEGEEGFRKREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQS-SANLALLRHGISLWIDVP 195
V+ L+ M +V+ G G+V S L GI ++++ P
Sbjct: 65 SVISDLTEMQGIVLATGGGSVISKEVRNKLSARGIVVYLETP 106
>gi|58040219|ref|YP_192183.1| bifunctional shikimate kinase [Gluconobacter oxydans 621H]
gi|58002633|gb|AAW61527.1| Bifunctional shikimate kinase [Gluconobacter oxydans 621H]
Length = 563
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 13/149 (8%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+V LVGM A KT +G+ LA + D+D + E A G S + F E ++ E
Sbjct: 25 TVVLVGMMGAGKTTIGRRLAQICGLPFVDAD-IEIERAAGCSIPEIFARHGEASFRDGER 83
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALL-RHGISLWIDVPPGMVARM--DHSGFP--- 208
V+++L ++ G GA + L+ RH +S+W+ P ++ + +G P
Sbjct: 84 RVIQRLLDGPPCILATGGGAWMDAQTRHLVRRHAVSVWLRAPVHVLVKRVAGRAGRPLLA 143
Query: 209 ---ESEVLPQLFALYKEMRDGYATADVTV 234
EVL +L L + YA AD+ +
Sbjct: 144 QGRPDEVLERLVGLRYPV---YAEADIII 169
>gi|170695726|ref|ZP_02886868.1| Shikimate kinase [Burkholderia graminis C4D1M]
gi|170139331|gb|EDT07517.1| Shikimate kinase [Burkholderia graminis C4D1M]
Length = 183
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+VF VG+ A KT +G+ +A L +FDSD + EA G F E G++ E
Sbjct: 9 NVFFVGLMGAGKTTVGRAIARRLDRPFFDSDHEI-EARTGARIPVIFELEGEAGFRDREA 67
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVPP 196
V+ +L+ +V+ G GAV N A L++ G+ +++ P
Sbjct: 68 SVISELTERDNIVLATGGGAVLRPENRAALQNRGVVIYLRANP 110
>gi|121999037|ref|YP_001003824.1| shikimate kinase [Halorhodospira halophila SL1]
gi|254806775|sp|A1WZB0.1|AROK_HALHL RecName: Full=Shikimate kinase; Short=SK
gi|121590442|gb|ABM63022.1| shikimate kinase [Halorhodospira halophila SL1]
Length = 177
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 55/103 (53%), Gaps = 2/103 (1%)
Query: 94 TSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAE 153
+ +FLVG A K+ +G+ LA+ L + DSD+ + EA G S F E G++ E
Sbjct: 8 SRIFLVGPMGAGKSTVGRELANLLGLEFIDSDAAI-EARTGVSIPWIFDIEGEAGFRARE 66
Query: 154 TEVLKQLSSMGRLVVCAGNGAVQSSANLALL-RHGISLWIDVP 195
V+ +L+ +VV G GAV + AN LL G+ +++ P
Sbjct: 67 AAVIDELTGRDGVVVATGGGAVTTPANRDLLGARGVVVYLYTP 109
>gi|421494111|ref|ZP_15941463.1| AROL [Morganella morganii subsp. morganii KT]
gi|455738438|ref|YP_007504704.1| Shikimate kinase III [Morganella morganii subsp. morganii KT]
gi|400191668|gb|EJO24812.1| AROL [Morganella morganii subsp. morganii KT]
gi|455420001|gb|AGG30331.1| Shikimate kinase III [Morganella morganii subsp. morganii KT]
Length = 177
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
++L+G A KT +GK LA AL Y + D+D+ V E S ++ +S + +++ E++
Sbjct: 10 IYLIGARGAGKTTVGKPLAQALLYDFIDTDACVTEQC-RMSISQLVEQSGWRSFRELESD 68
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLR 185
VL+Q+S RLV G G V + N A ++
Sbjct: 69 VLRQVSKPHRLVS-TGGGIVMAPENRAFMQ 97
>gi|392965802|ref|ZP_10331221.1| Shikimate kinase [Fibrisoma limi BUZ 3]
gi|387844866|emb|CCH53267.1| Shikimate kinase [Fibrisoma limi BUZ 3]
Length = 160
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 3/104 (2%)
Query: 101 MNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEVLKQL 160
M ++ KT LGK +A+AL Y + D+D + G + F +S E +++AE VL ++
Sbjct: 1 MPSSGKTTLGKRIAEALHYRFVDTDKRIVREE-GRTINDIFAQSGESYFREAERRVLCKI 59
Query: 161 SSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVPPG-MVARM 202
LVV G G + N+ + GIS+++DVP +V RM
Sbjct: 60 KPGSSLVVATGGGMPCFNDNMDYINATGISVFLDVPVAVLVQRM 103
>gi|441505724|ref|ZP_20987704.1| Shikimate kinase I [Photobacterium sp. AK15]
gi|441426454|gb|ELR63936.1| Shikimate kinase I [Photobacterium sp. AK15]
Length = 173
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L +FDSD+++ E G + + F E G++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRHLAQQLHMEFFDSDTVIEERTGAD-ISWVFDVEGEDGFRVREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
+V+ L+ +V+ G G+V+S N L GI ++++
Sbjct: 65 KVINDLTQEQGIVLATGGGSVKSKENRNRLSARGIVVYLE 104
>gi|398793577|ref|ZP_10553870.1| shikimate kinase [Pantoea sp. YR343]
gi|398210362|gb|EJM97011.1| shikimate kinase [Pantoea sp. YR343]
Length = 174
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 79/168 (47%), Gaps = 14/168 (8%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
++L+G KT +GK L+ AL Y + D+D + S A+ ++ ETE
Sbjct: 5 IYLIGARGCGKTTVGKALSQALGYAFNDTDHY-LQLTTQRSVAEIVASEGWDSFRARETE 63
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMVA-RMDHSGFPESEVL 213
L+ +++ V+ G G V + N +R HG +W++ P ++A R++H PE+
Sbjct: 64 SLRAVTAPN-TVIATGGGMVLAEVNCRFMREHGQVIWLNAPSEVLADRLEHQ--PEAAQR 120
Query: 214 PQLFA--LYKEMRDGYATADVTVSLQKVASQLGYDDLDAVTTEDMTLE 259
P L + +EM D+ + Q + +++A+ + D +E
Sbjct: 121 PTLTGRPIAEEM------GDILRERAHLYRQTAHHEVNAMQSPDRVVE 162
>gi|359409114|ref|ZP_09201582.1| shikimate kinase [SAR116 cluster alpha proteobacterium HIMB100]
gi|356675867|gb|EHI48220.1| shikimate kinase [SAR116 cluster alpha proteobacterium HIMB100]
Length = 213
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 80/170 (47%), Gaps = 21/170 (12%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ LVG+ + KT LGK LA AL + DSD L+ E S F S E +++ E
Sbjct: 27 TIVLVGLMGSGKTALGKRLAVALDRPFIDSDQLI-EHEASLSVRDIFELSGEPKFREIER 85
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLA-LLRHGISLWID-VPPGMVARMDH-------- 204
+ + + +++ G GA A ++ H IS+WID P ++ R+ +
Sbjct: 86 NTILKHVTGAPVILSTGGGAFCDPRTRAEIIEHAISIWIDSTPKNLLRRIGNTASRPLLT 145
Query: 205 SGFPESEVLPQL----FALYKE----MRDGYATADVTV-SLQKVASQLGY 245
+G P E+L +L A YK+ +R G T V++ + + Q GY
Sbjct: 146 TGDP-LEILTRLRETRLADYKQAELHVRTGRHTRRVSMKKILNILEQTGY 194
>gi|341615147|ref|ZP_08702016.1| shikimate kinase [Citromicrobium sp. JLT1363]
Length = 190
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 71/153 (46%), Gaps = 15/153 (9%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+ LVG+ KT +G+ LA+ L + D+D + EAA S A+ F + E ++ E
Sbjct: 24 IVLVGLMGVGKTTVGRRLANLLGRSFVDADEAIEEAA-RLSVAEIFSQFGEPYFRDGERR 82
Query: 156 VLKQLSSMGRLVVCAGNGA-VQSSANLALLRHGISLWIDVPPGMV----ARMDH-----S 205
V+ +L V+ G GA V +L ++ WID + +R DH S
Sbjct: 83 VIARLIEEDHGVIATGGGAFVDDETRALILERAVAAWIDCDIRTLVERTSRRDHRPLLRS 142
Query: 206 GFPESEVLPQLFALYKEMRDGYATADVTVSLQK 238
G PE E+L +L +E YA A V V QK
Sbjct: 143 GDPE-EILSRLM---REREGFYAQAHVRVEGQK 171
>gi|167644690|ref|YP_001682353.1| shikimate kinase [Caulobacter sp. K31]
gi|167347120|gb|ABZ69855.1| Shikimate kinase [Caulobacter sp. K31]
Length = 198
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 61/125 (48%), Gaps = 2/125 (1%)
Query: 78 FAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESA 137
F + D L+ ++ LVG+ K+ +G+ LA AL + D+D+ V EAA G S
Sbjct: 8 FRPDHEGTDPRAALRHKTIVLVGLMGVGKSSVGRRLATALDLPFRDADNEV-EAAAGRSI 66
Query: 138 AKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPP 196
+ F E E ++ E V+ +L V+ G GA + AL++ I++W+
Sbjct: 67 PEIFAEMGEPAFRDGERRVIARLLEEPPHVLATGGGAFANPETRALIKSKAIAVWLKADL 126
Query: 197 GMVAR 201
++AR
Sbjct: 127 ELLAR 131
>gi|255655854|ref|ZP_05401263.1| shikimate kinase [Clostridium difficile QCD-23m63]
gi|296450865|ref|ZP_06892615.1| shikimate kinase [Clostridium difficile NAP08]
gi|296879132|ref|ZP_06903127.1| shikimate kinase [Clostridium difficile NAP07]
gi|296260336|gb|EFH07181.1| shikimate kinase [Clostridium difficile NAP08]
gi|296429675|gb|EFH15527.1| shikimate kinase [Clostridium difficile NAP07]
Length = 177
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 80/163 (49%), Gaps = 10/163 (6%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+ L+GM + KT +GK LA + D D + + A +S A+ F E E ++ ET+
Sbjct: 9 LILIGMPGSGKTTIGKLLAREYNCSFCDMDDYIVKIAQ-KSIAELFSEG-EDIFRNYETQ 66
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVPPGMVARMDHSGFPESEVLP 214
++LS + V+ G G ++ N+ +L+ GI ++ID P + ++ +L
Sbjct: 67 ACRELSISNKAVISTGGGVIKKDVNMEILKETGIIIFIDRPIQKI--LEDININSRPLLK 124
Query: 215 ----QLFALYKEMRDGYAT-ADVTVSLQKVASQLGYDDLDAVT 252
+L+ LY E + Y +D+ + K + Y+ ++AV+
Sbjct: 125 NGKDRLYNLYNERINLYKKFSDIEILNDKSLNTAVYNIINAVS 167
>gi|407780153|ref|ZP_11127399.1| shikimate kinase [Nitratireductor pacificus pht-3B]
gi|407298030|gb|EKF17176.1| shikimate kinase [Nitratireductor pacificus pht-3B]
Length = 207
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 63/132 (47%), Gaps = 11/132 (8%)
Query: 67 TVTKVAAEDPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDS 126
TVT +AA + A + L SV VG+ A KT +G+ +A+ L + DSD
Sbjct: 2 TVTDIAA-------RFDLATLGQRLGARSVVFVGLMGAGKTVIGRRVAEMLGMPFVDSDH 54
Query: 127 LVFEAAGGESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGA-VQSSANLALLR 185
+ EA + A F E ++ E V+ +L G VV G GA V + A+ R
Sbjct: 55 EI-EAVSRMTVADLFSAYGEAEFRALERRVIARLLKTGPRVVSTGGGAFVNPATRRAVGR 113
Query: 186 HGISLWI--DVP 195
GIS+W+ D+P
Sbjct: 114 RGISVWLKADLP 125
>gi|393760675|ref|ZP_10349482.1| shikimate kinase [Alcaligenes faecalis subsp. faecalis NCIB 8687]
gi|393161173|gb|EJC61240.1| shikimate kinase [Alcaligenes faecalis subsp. faecalis NCIB 8687]
Length = 201
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+ LVGM A KT +G+ LA L+ + D D EA G + F E+G+++ E+
Sbjct: 34 IILVGMMGAGKTTIGRQLARELKREFMDLDH-ELEARSGVRVSTIFEFEGEQGFRKRESA 92
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWI 192
VL S +V+ G GA+ S AN +++ GI +++
Sbjct: 93 VLDICSRQSGIVLATGGGAILSEANRQIIKDRGIVVYL 130
>gi|145631334|ref|ZP_01787106.1| shikimate kinase [Haemophilus influenzae R3021]
gi|148825530|ref|YP_001290283.1| shikimate kinase [Haemophilus influenzae PittEE]
gi|166219245|sp|A5UAU9.1|AROK_HAEIE RecName: Full=Shikimate kinase; Short=SK
gi|144983119|gb|EDJ90619.1| shikimate kinase [Haemophilus influenzae R3021]
gi|148715690|gb|ABQ97900.1| shikimate kinase [Haemophilus influenzae PittEE]
Length = 180
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L + DSD+++ E G + + F E G+++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRQLAQQLNMDFIDSDAVIEERTGAD-ISWIFDLEGEDGFRKREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
++ +L+ M +V+ G GAV S N L GI ++++
Sbjct: 65 RIINELTQMQGIVLSTGGGAVLSKENRNYLSARGIVIYLE 104
>gi|329922662|ref|ZP_08278214.1| shikimate kinase [Paenibacillus sp. HGF5]
gi|328942004|gb|EGG38287.1| shikimate kinase [Paenibacillus sp. HGF5]
Length = 172
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 74/148 (50%), Gaps = 8/148 (5%)
Query: 93 GTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQA 152
G ++ L+GM K+ +G+ +AD+L Y D DS + E G + ++ F + E +++A
Sbjct: 7 GRNIILIGMMGTGKSTVGRLVADSLGYNLIDLDSEI-ERMEGRTISEMFEKDGEPYFREA 65
Query: 153 ETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHG---ISLWIDVPPGMVARMDHSG--- 206
E+ L+ + +V+ +G GAV S N +++ G ++L D +V R+
Sbjct: 66 ESAALRSVLLRDGIVLASGGGAVLRSDNCDVMKRGGWVVALTADAAS-IVERVRGDANRP 124
Query: 207 FPESEVLPQLFALYKEMRDGYATADVTV 234
+V ++ + E +D Y ADV V
Sbjct: 125 LLAGDVEERVRRILDERKDKYRFADVMV 152
>gi|431795543|ref|YP_007222447.1| shikimate kinase [Echinicola vietnamensis DSM 17526]
gi|430786308|gb|AGA76437.1| shikimate kinase [Echinicola vietnamensis DSM 17526]
Length = 176
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+ LVGM + K+ LGK LA L + ++D D + + G S F E+ E +++ ET
Sbjct: 7 IVLVGMPGSGKSTLGKTLAGQLGFDFYDLDEEIVKEE-GRSIPAIFMENGEGYFRRTETR 65
Query: 156 VLKQLSSM-GRLVVCAGNGAVQSSANLALL-RHGISLWIDV 194
V+++L + V+ G GA + N+ L+ RHGIS++++V
Sbjct: 66 VIEKLLQIDSAFVLSTGGGAPCFNDNMTLINRHGISVFLNV 106
>gi|414175668|ref|ZP_11430072.1| shikimate kinase [Afipia broomeae ATCC 49717]
gi|410889497|gb|EKS37300.1| shikimate kinase [Afipia broomeae ATCC 49717]
Length = 207
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 56/118 (47%), Gaps = 1/118 (0%)
Query: 85 ADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRES 144
ADI L G S+ LVGM + K+ +G+ L L + D+D + A G + ++ F +
Sbjct: 16 ADIVAALGGRSIVLVGMMGSGKSTIGRRLGARLHVPFLDADHEIEIAHAGMTVSEIFAQH 75
Query: 145 DEKGYQQAETEVLKQLSSMGRLVVCAGNGA-VQSSANLALLRHGISLWIDVPPGMVAR 201
E ++ E V+ +L G V+ G GA ++ + +S+W+ ++ R
Sbjct: 76 GEPYFRDGEARVIARLLETGPCVIATGGGAFMREETRRRIHDKAVSIWLQADGDIILR 133
>gi|238755111|ref|ZP_04616458.1| Shikimate kinase 1 [Yersinia ruckeri ATCC 29473]
gi|238706671|gb|EEP99041.1| Shikimate kinase 1 [Yersinia ruckeri ATCC 29473]
Length = 195
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 71/135 (52%), Gaps = 8/135 (5%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++F+VG A KT +G LA AL Y + D+DS + + + A RE G+++ E+
Sbjct: 25 TIFMVGARGAGKTTIGNALAQALGYRFIDTDSFMQQTSLLTVAEIVAREG-WSGFRRRES 83
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALL-RHGISLWIDVPPGMVA-RMDHSGFPESEV 212
L+ ++S VV G GAV S+ N A + RHG+ +++ ++A R+ PE
Sbjct: 84 LALQTVTS-PETVVATGGGAVLSADNRAFMRRHGLVIYLRASADILAERLAEE--PEDAQ 140
Query: 213 LPQLFA--LYKEMRD 225
P L + +EM+D
Sbjct: 141 RPSLTGKPIVEEMQD 155
>gi|156972408|ref|YP_001443315.1| shikimate kinase I [Vibrio harveyi ATCC BAA-1116]
gi|350529489|ref|ZP_08908430.1| shikimate kinase I [Vibrio rotiferianus DAT722]
gi|388598458|ref|ZP_10156854.1| shikimate kinase I [Vibrio campbellii DS40M4]
gi|166219877|sp|A7MSY3.1|AROK_VIBHB RecName: Full=Shikimate kinase; Short=SK
gi|156524002|gb|ABU69088.1| hypothetical protein VIBHAR_00028 [Vibrio harveyi ATCC BAA-1116]
Length = 172
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L + DSD+++ E G + A F E+G+++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRHLAQQLHMEFVDSDTVIEERTGAD-IAWVFDVEGEEGFRKREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
VL+ L+ +V+ G G+V+S N L G+ ++++
Sbjct: 65 AVLEDLTQEQGIVLATGGGSVKSKENRNRLSARGVVVYLE 104
>gi|22124879|ref|NP_668302.1| shikimate kinase II [Yersinia pestis KIM10+]
gi|45440570|ref|NP_992109.1| shikimate kinase [Yersinia pestis biovar Microtus str. 91001]
gi|108808698|ref|YP_652614.1| shikimate kinase [Yersinia pestis Antiqua]
gi|108811043|ref|YP_646810.1| shikimate kinase [Yersinia pestis Nepal516]
gi|145600103|ref|YP_001164179.1| shikimate kinase II [Yersinia pestis Pestoides F]
gi|149364942|ref|ZP_01886977.1| shikimate kinase II [Yersinia pestis CA88-4125]
gi|162418402|ref|YP_001607639.1| shikimate kinase [Yersinia pestis Angola]
gi|165926644|ref|ZP_02222476.1| shikimate kinase 2 [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165935849|ref|ZP_02224419.1| shikimate kinase 2 [Yersinia pestis biovar Orientalis str. IP275]
gi|166010990|ref|ZP_02231888.1| shikimate kinase 2 [Yersinia pestis biovar Antiqua str. E1979001]
gi|166213009|ref|ZP_02239044.1| shikimate kinase 2 [Yersinia pestis biovar Antiqua str. B42003004]
gi|167399065|ref|ZP_02304589.1| shikimate kinase 2 [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167421580|ref|ZP_02313333.1| shikimate kinase 2 [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167423841|ref|ZP_02315594.1| shikimate kinase 2 [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|167468110|ref|ZP_02332814.1| shikimate kinase 2 [Yersinia pestis FV-1]
gi|218930242|ref|YP_002348117.1| shikimate kinase II [Yersinia pestis CO92]
gi|229838820|ref|ZP_04458979.1| shikimate kinase II [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229896030|ref|ZP_04511200.1| shikimate kinase II [Yersinia pestis Pestoides A]
gi|229899388|ref|ZP_04514531.1| shikimate kinase II [Yersinia pestis biovar Orientalis str. India
195]
gi|229901268|ref|ZP_04516390.1| shikimate kinase II [Yersinia pestis Nepal516]
gi|270489457|ref|ZP_06206531.1| shikimate kinase [Yersinia pestis KIM D27]
gi|294504936|ref|YP_003568998.1| shikimate kinase [Yersinia pestis Z176003]
gi|384123404|ref|YP_005506024.1| shikimate kinase [Yersinia pestis D106004]
gi|384127260|ref|YP_005509874.1| shikimate kinase [Yersinia pestis D182038]
gi|384138945|ref|YP_005521647.1| shikimate kinase [Yersinia pestis A1122]
gi|384415894|ref|YP_005625256.1| shikimate kinase [Yersinia pestis biovar Medievalis str. Harbin 35]
gi|420548312|ref|ZP_15046132.1| shikimate kinase 2 [Yersinia pestis PY-01]
gi|420553631|ref|ZP_15050879.1| shikimate kinase 2 [Yersinia pestis PY-02]
gi|420559233|ref|ZP_15055754.1| shikimate kinase 2 [Yersinia pestis PY-03]
gi|420569671|ref|ZP_15065171.1| shikimate kinase 2 [Yersinia pestis PY-05]
gi|420575341|ref|ZP_15070302.1| shikimate kinase 2 [Yersinia pestis PY-06]
gi|420580657|ref|ZP_15075136.1| shikimate kinase 2 [Yersinia pestis PY-07]
gi|420585996|ref|ZP_15079972.1| shikimate kinase 2 [Yersinia pestis PY-08]
gi|420591110|ref|ZP_15084569.1| shikimate kinase 2 [Yersinia pestis PY-09]
gi|420596519|ref|ZP_15089436.1| shikimate kinase 2 [Yersinia pestis PY-10]
gi|420602167|ref|ZP_15094459.1| shikimate kinase 2 [Yersinia pestis PY-11]
gi|420607591|ref|ZP_15099362.1| shikimate kinase 2 [Yersinia pestis PY-12]
gi|420613007|ref|ZP_15104221.1| shikimate kinase 2 [Yersinia pestis PY-13]
gi|420618361|ref|ZP_15108888.1| shikimate kinase family protein [Yersinia pestis PY-14]
gi|420623657|ref|ZP_15113658.1| shikimate kinase 2 [Yersinia pestis PY-15]
gi|420628740|ref|ZP_15118270.1| shikimate kinase 2 [Yersinia pestis PY-16]
gi|420633865|ref|ZP_15122862.1| shikimate kinase 2 [Yersinia pestis PY-19]
gi|420644561|ref|ZP_15132559.1| shikimate kinase 2 [Yersinia pestis PY-29]
gi|420649827|ref|ZP_15137317.1| shikimate kinase 2 [Yersinia pestis PY-32]
gi|420671116|ref|ZP_15156498.1| shikimate kinase family protein [Yersinia pestis PY-45]
gi|420676467|ref|ZP_15161362.1| shikimate kinase 2 [Yersinia pestis PY-46]
gi|420682091|ref|ZP_15166442.1| shikimate kinase 2 [Yersinia pestis PY-47]
gi|420687423|ref|ZP_15171181.1| shikimate kinase 2 [Yersinia pestis PY-48]
gi|420692639|ref|ZP_15175760.1| shikimate kinase 2 [Yersinia pestis PY-52]
gi|420698400|ref|ZP_15180828.1| shikimate kinase 2 [Yersinia pestis PY-53]
gi|420704235|ref|ZP_15185471.1| shikimate kinase family protein [Yersinia pestis PY-54]
gi|420709614|ref|ZP_15190245.1| shikimate kinase 2 [Yersinia pestis PY-55]
gi|420715061|ref|ZP_15195085.1| shikimate kinase 2 [Yersinia pestis PY-56]
gi|420720570|ref|ZP_15199811.1| shikimate kinase 2 [Yersinia pestis PY-58]
gi|420726044|ref|ZP_15204626.1| shikimate kinase 2 [Yersinia pestis PY-59]
gi|420731637|ref|ZP_15209653.1| shikimate kinase 2 [Yersinia pestis PY-60]
gi|420736648|ref|ZP_15214178.1| shikimate kinase 2 [Yersinia pestis PY-61]
gi|420742122|ref|ZP_15219098.1| shikimate kinase 2 [Yersinia pestis PY-63]
gi|420747848|ref|ZP_15223940.1| shikimate kinase 2 [Yersinia pestis PY-64]
gi|420753278|ref|ZP_15228788.1| shikimate kinase 2 [Yersinia pestis PY-65]
gi|420759065|ref|ZP_15233446.1| shikimate kinase 2 [Yersinia pestis PY-66]
gi|420764332|ref|ZP_15238069.1| shikimate kinase 2 [Yersinia pestis PY-71]
gi|420769559|ref|ZP_15242758.1| shikimate kinase 2 [Yersinia pestis PY-72]
gi|420774540|ref|ZP_15247268.1| shikimate kinase 2 [Yersinia pestis PY-76]
gi|420780156|ref|ZP_15252211.1| shikimate kinase 2 [Yersinia pestis PY-88]
gi|420785752|ref|ZP_15257103.1| shikimate kinase 2 [Yersinia pestis PY-89]
gi|420790895|ref|ZP_15261723.1| shikimate kinase family protein [Yersinia pestis PY-90]
gi|420796418|ref|ZP_15266687.1| shikimate kinase 2 [Yersinia pestis PY-91]
gi|420801481|ref|ZP_15271237.1| shikimate kinase 2 [Yersinia pestis PY-92]
gi|420806833|ref|ZP_15276084.1| shikimate kinase 2 [Yersinia pestis PY-93]
gi|420812201|ref|ZP_15280906.1| shikimate kinase family protein [Yersinia pestis PY-94]
gi|420817696|ref|ZP_15285870.1| shikimate kinase 2 [Yersinia pestis PY-95]
gi|420823018|ref|ZP_15290645.1| shikimate kinase 2 [Yersinia pestis PY-96]
gi|420828097|ref|ZP_15295210.1| shikimate kinase 2 [Yersinia pestis PY-98]
gi|420833794|ref|ZP_15300356.1| shikimate kinase 2 [Yersinia pestis PY-99]
gi|420838651|ref|ZP_15304745.1| shikimate kinase 2 [Yersinia pestis PY-100]
gi|420843843|ref|ZP_15309458.1| shikimate kinase 2 [Yersinia pestis PY-101]
gi|420849504|ref|ZP_15314540.1| shikimate kinase 2 [Yersinia pestis PY-102]
gi|420855170|ref|ZP_15319340.1| shikimate kinase 2 [Yersinia pestis PY-103]
gi|420860360|ref|ZP_15323911.1| shikimate kinase 2 [Yersinia pestis PY-113]
gi|421764715|ref|ZP_16201503.1| shikimate kinase II [Yersinia pestis INS]
gi|30172911|sp|Q8ZC15.1|AROL_YERPE RecName: Full=Shikimate kinase 2; Short=SK 2
gi|123245614|sp|Q1C4F3.1|AROL_YERPA RecName: Full=Shikimate kinase 2; Short=SK 2
gi|123246679|sp|Q1CLC0.1|AROL_YERPN RecName: Full=Shikimate kinase 2; Short=SK 2
gi|166988293|sp|A4TPJ4.1|AROL_YERPP RecName: Full=Shikimate kinase 2; Short=SK 2
gi|226729154|sp|A9R2W3.1|AROL_YERPG RecName: Full=Shikimate kinase 2; Short=SK 2
gi|21957712|gb|AAM84553.1|AE013700_9 shikimate kinase II [Yersinia pestis KIM10+]
gi|45435427|gb|AAS60986.1| Shikimate kinase [Yersinia pestis biovar Microtus str. 91001]
gi|108774691|gb|ABG17210.1| shikimate kinase [Yersinia pestis Nepal516]
gi|108780611|gb|ABG14669.1| shikimate kinase [Yersinia pestis Antiqua]
gi|115348853|emb|CAL21809.1| shikimate kinase II [Yersinia pestis CO92]
gi|145211799|gb|ABP41206.1| shikimate kinase [Yersinia pestis Pestoides F]
gi|149291355|gb|EDM41429.1| shikimate kinase II [Yersinia pestis CA88-4125]
gi|162351217|gb|ABX85165.1| shikimate kinase 2 [Yersinia pestis Angola]
gi|165915994|gb|EDR34601.1| shikimate kinase 2 [Yersinia pestis biovar Orientalis str. IP275]
gi|165921572|gb|EDR38769.1| shikimate kinase 2 [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165989990|gb|EDR42291.1| shikimate kinase 2 [Yersinia pestis biovar Antiqua str. E1979001]
gi|166205796|gb|EDR50276.1| shikimate kinase 2 [Yersinia pestis biovar Antiqua str. B42003004]
gi|166960499|gb|EDR56520.1| shikimate kinase 2 [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167051569|gb|EDR62977.1| shikimate kinase 2 [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167058011|gb|EDR67757.1| shikimate kinase 2 [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|229681197|gb|EEO77291.1| shikimate kinase II [Yersinia pestis Nepal516]
gi|229687790|gb|EEO79863.1| shikimate kinase II [Yersinia pestis biovar Orientalis str. India
195]
gi|229695186|gb|EEO85233.1| shikimate kinase II [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229700953|gb|EEO88982.1| shikimate kinase II [Yersinia pestis Pestoides A]
gi|262363000|gb|ACY59721.1| shikimate kinase II [Yersinia pestis D106004]
gi|262366924|gb|ACY63481.1| shikimate kinase II [Yersinia pestis D182038]
gi|270337961|gb|EFA48738.1| shikimate kinase [Yersinia pestis KIM D27]
gi|294355395|gb|ADE65736.1| shikimate kinase II [Yersinia pestis Z176003]
gi|320016398|gb|ADV99969.1| shikimate kinase II [Yersinia pestis biovar Medievalis str. Harbin
35]
gi|342854074|gb|AEL72627.1| shikimate kinase II [Yersinia pestis A1122]
gi|391423304|gb|EIQ85803.1| shikimate kinase 2 [Yersinia pestis PY-01]
gi|391423642|gb|EIQ86108.1| shikimate kinase 2 [Yersinia pestis PY-02]
gi|391423788|gb|EIQ86236.1| shikimate kinase 2 [Yersinia pestis PY-03]
gi|391439410|gb|EIR00070.1| shikimate kinase 2 [Yersinia pestis PY-05]
gi|391443084|gb|EIR03432.1| shikimate kinase 2 [Yersinia pestis PY-06]
gi|391455205|gb|EIR14344.1| shikimate kinase 2 [Yersinia pestis PY-07]
gi|391456056|gb|EIR15116.1| shikimate kinase 2 [Yersinia pestis PY-08]
gi|391457945|gb|EIR16847.1| shikimate kinase 2 [Yersinia pestis PY-09]
gi|391470973|gb|EIR28577.1| shikimate kinase 2 [Yersinia pestis PY-10]
gi|391472354|gb|EIR29821.1| shikimate kinase 2 [Yersinia pestis PY-11]
gi|391473308|gb|EIR30696.1| shikimate kinase 2 [Yersinia pestis PY-12]
gi|391487075|gb|EIR43051.1| shikimate kinase 2 [Yersinia pestis PY-13]
gi|391488583|gb|EIR44410.1| shikimate kinase 2 [Yersinia pestis PY-15]
gi|391488878|gb|EIR44676.1| shikimate kinase family protein [Yersinia pestis PY-14]
gi|391503011|gb|EIR57248.1| shikimate kinase 2 [Yersinia pestis PY-16]
gi|391503183|gb|EIR57397.1| shikimate kinase 2 [Yersinia pestis PY-19]
gi|391519005|gb|EIR71677.1| shikimate kinase 2 [Yersinia pestis PY-29]
gi|391521510|gb|EIR73972.1| shikimate kinase 2 [Yersinia pestis PY-32]
gi|391538943|gb|EIR89700.1| shikimate kinase family protein [Yersinia pestis PY-45]
gi|391551924|gb|EIS01389.1| shikimate kinase 2 [Yersinia pestis PY-46]
gi|391552154|gb|EIS01603.1| shikimate kinase 2 [Yersinia pestis PY-47]
gi|391552625|gb|EIS02034.1| shikimate kinase 2 [Yersinia pestis PY-48]
gi|391566819|gb|EIS14761.1| shikimate kinase 2 [Yersinia pestis PY-52]
gi|391568030|gb|EIS15814.1| shikimate kinase 2 [Yersinia pestis PY-53]
gi|391572661|gb|EIS19861.1| shikimate kinase family protein [Yersinia pestis PY-54]
gi|391581270|gb|EIS27172.1| shikimate kinase 2 [Yersinia pestis PY-55]
gi|391583454|gb|EIS29110.1| shikimate kinase 2 [Yersinia pestis PY-56]
gi|391594008|gb|EIS38225.1| shikimate kinase 2 [Yersinia pestis PY-58]
gi|391596949|gb|EIS40822.1| shikimate kinase 2 [Yersinia pestis PY-60]
gi|391598112|gb|EIS41872.1| shikimate kinase 2 [Yersinia pestis PY-59]
gi|391611320|gb|EIS53509.1| shikimate kinase 2 [Yersinia pestis PY-61]
gi|391611890|gb|EIS54021.1| shikimate kinase 2 [Yersinia pestis PY-63]
gi|391614724|gb|EIS56561.1| shikimate kinase 2 [Yersinia pestis PY-64]
gi|391624518|gb|EIS65141.1| shikimate kinase 2 [Yersinia pestis PY-65]
gi|391629144|gb|EIS69112.1| shikimate kinase 2 [Yersinia pestis PY-66]
gi|391635251|gb|EIS74437.1| shikimate kinase 2 [Yersinia pestis PY-71]
gi|391637248|gb|EIS76191.1| shikimate kinase 2 [Yersinia pestis PY-72]
gi|391647257|gb|EIS84907.1| shikimate kinase 2 [Yersinia pestis PY-76]
gi|391650816|gb|EIS88062.1| shikimate kinase 2 [Yersinia pestis PY-88]
gi|391655305|gb|EIS92058.1| shikimate kinase 2 [Yersinia pestis PY-89]
gi|391660109|gb|EIS96298.1| shikimate kinase family protein [Yersinia pestis PY-90]
gi|391667671|gb|EIT02971.1| shikimate kinase 2 [Yersinia pestis PY-91]
gi|391677158|gb|EIT11487.1| shikimate kinase 2 [Yersinia pestis PY-93]
gi|391677996|gb|EIT12256.1| shikimate kinase 2 [Yersinia pestis PY-92]
gi|391678479|gb|EIT12688.1| shikimate kinase family protein [Yersinia pestis PY-94]
gi|391691125|gb|EIT24076.1| shikimate kinase 2 [Yersinia pestis PY-95]
gi|391694130|gb|EIT26822.1| shikimate kinase 2 [Yersinia pestis PY-96]
gi|391695748|gb|EIT28294.1| shikimate kinase 2 [Yersinia pestis PY-98]
gi|391708010|gb|EIT39303.1| shikimate kinase 2 [Yersinia pestis PY-99]
gi|391711391|gb|EIT42360.1| shikimate kinase 2 [Yersinia pestis PY-100]
gi|391712291|gb|EIT43185.1| shikimate kinase 2 [Yersinia pestis PY-101]
gi|391724128|gb|EIT53736.1| shikimate kinase 2 [Yersinia pestis PY-102]
gi|391724924|gb|EIT54447.1| shikimate kinase 2 [Yersinia pestis PY-103]
gi|391727539|gb|EIT56742.1| shikimate kinase 2 [Yersinia pestis PY-113]
gi|411174266|gb|EKS44299.1| shikimate kinase II [Yersinia pestis INS]
Length = 174
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 3/108 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++F+VG A KT +GK LA AL Y + D+D L + + A+ G++ E+
Sbjct: 4 TIFMVGARGAGKTTIGKALAQALGYRFVDTD-LFMQQTSQMTVAEVVESEGWDGFRLRES 62
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMVAR 201
L+ +++ + VV G GAV SS N A +R HG +++ ++A+
Sbjct: 63 MALQAVTA-PKTVVATGGGAVLSSENRAFMRDHGRVIYLRASAAVLAK 109
>gi|159896799|ref|YP_001543046.1| shikimate kinase., 3-dehydroquinate synthase [Herpetosiphon
aurantiacus DSM 785]
gi|159889838|gb|ABX02918.1| Shikimate kinase., 3-dehydroquinate synthase [Herpetosiphon
aurantiacus DSM 785]
Length = 539
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 93 GTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQA 152
G S+ L+G + A K+ +G LA AL + + D D L+ E A +S + F + E G+++
Sbjct: 5 GQSIALIGPSGAGKSTVGVGLAQALGWRFIDLDQLIIERAE-KSISDIFSQEGEAGFRER 63
Query: 153 ETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRH 186
ET L Q + V+ G G V N LLR
Sbjct: 64 ETAALVQALQTDQAVIACGGGIVLREINRQLLRE 97
>gi|424031899|ref|ZP_17771323.1| shikimate kinase 1 [Vibrio cholerae HENC-01]
gi|424042468|ref|ZP_17780177.1| shikimate kinase 1 [Vibrio cholerae HENC-02]
gi|408876904|gb|EKM16009.1| shikimate kinase 1 [Vibrio cholerae HENC-01]
gi|408889557|gb|EKM27952.1| shikimate kinase 1 [Vibrio cholerae HENC-02]
Length = 172
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L + DSD+++ E G + A F E+G+++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRHLAQQLHMEFVDSDTVIEERTGAD-IAWVFDVEGEEGFRKREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
VL+ L+ +V+ G G+V+S N L G+ ++++
Sbjct: 65 AVLEDLTQEQGIVLATGGGSVKSKENRNRLSARGVVVYLE 104
>gi|372487772|ref|YP_005027337.1| shikimate kinase [Dechlorosoma suillum PS]
gi|359354325|gb|AEV25496.1| shikimate kinase [Dechlorosoma suillum PS]
Length = 190
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
Query: 92 KGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQ 151
K ++ LVG+ A KT +G+ LA L + DSD V E+ G S F E G+++
Sbjct: 4 KQDNIILVGLMGAGKTTIGRLLAKRLGKRFVDSDHEV-ESRTGVSIPVIFEIEGEAGFRK 62
Query: 152 AETEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMV 199
E+ V++ LS LV+ G G V S N ++ G +++ PP ++
Sbjct: 63 RESMVIEDLSRESGLVMATGGGVVLSPENREAIKAGGFVVYLCAPPELL 111
>gi|146310520|ref|YP_001175594.1| shikimate kinase [Enterobacter sp. 638]
gi|166988288|sp|A4W763.1|AROL_ENT38 RecName: Full=Shikimate kinase 2; Short=SK 2
gi|145317396|gb|ABP59543.1| shikimate kinase [Enterobacter sp. 638]
Length = 174
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 77/166 (46%), Gaps = 24/166 (14%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+FLVG KT +G LA A + + D+D + G + A+ + + ++ ETE
Sbjct: 5 IFLVGPRGCGKTTVGLELARACQSQFVDTDHW-LQTKAGRTIAEIVEKEGWETFRALETE 63
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPG-MVARMDHSGFPE---- 209
LK +S+ V+ G G + + N +R HGI +++ P +V R++ FPE
Sbjct: 64 TLKAVSAPS-TVIATGGGIILAEHNRGFMREHGIVIYLCAPVATLVERLE--AFPEEGQR 120
Query: 210 ------------SEVLPQLFALYKEMRDGYATADVTVSLQKVASQL 243
SEVL + ALY+E + D + + ++V S +
Sbjct: 121 PTLTGKPISDEVSEVLAERDALYREA--AHHVVDASQTPEQVVSHI 164
>gi|51595261|ref|YP_069452.1| shikimate kinase [Yersinia pseudotuberculosis IP 32953]
gi|153947050|ref|YP_001402103.1| shikimate kinase [Yersinia pseudotuberculosis IP 31758]
gi|170025499|ref|YP_001722004.1| shikimate kinase [Yersinia pseudotuberculosis YPIII]
gi|186894278|ref|YP_001871390.1| shikimate kinase [Yersinia pseudotuberculosis PB1/+]
gi|81640236|sp|Q66DY2.1|AROL_YERPS RecName: Full=Shikimate kinase 2; Short=SK 2
gi|166988292|sp|A7FLH5.1|AROL_YERP3 RecName: Full=Shikimate kinase 2; Short=SK 2
gi|226729153|sp|B2K6Q9.1|AROL_YERPB RecName: Full=Shikimate kinase 2; Short=SK 2
gi|226729155|sp|B1JIG7.1|AROL_YERPY RecName: Full=Shikimate kinase 2; Short=SK 2
gi|51588543|emb|CAH20151.1| shikimate kinase II [Yersinia pseudotuberculosis IP 32953]
gi|152958545|gb|ABS46006.1| shikimate kinase 2 [Yersinia pseudotuberculosis IP 31758]
gi|169752033|gb|ACA69551.1| Shikimate kinase [Yersinia pseudotuberculosis YPIII]
gi|186697304|gb|ACC87933.1| shikimate kinase [Yersinia pseudotuberculosis PB1/+]
Length = 174
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 80/168 (47%), Gaps = 12/168 (7%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++F+VG A KT +GK LA AL Y + D+D L + + A+ G++ E+
Sbjct: 4 TIFMVGARGAGKTTIGKALAQALGYRFVDTD-LFMQQTSQMTVAEVVESEGWDGFRLRES 62
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMVARMDHSGFPESEVL 213
L+ +++ + V+ G GAV SS N A +R HG +++ ++A+ + PE
Sbjct: 63 MALQAVTA-PKTVIATGGGAVLSSENRAFMRDHGRVIYLRASAAVLAK-RLAEDPEEAQR 120
Query: 214 PQLFA--LYKEMRDGYATADVTVSLQKVASQLGYDDLDAVTTEDMTLE 259
P L + +EM DV S + + + + LD T + +E
Sbjct: 121 PSLTGKPIVEEM------LDVLASREALYQDVAHHVLDGTQTPSLVVE 162
>gi|25028297|ref|NP_738351.1| shikimate kinase [Corynebacterium efficiens YS-314]
gi|38604881|sp|Q8FT30.1|AROK_COREF RecName: Full=Shikimate kinase; Short=SK
gi|23493581|dbj|BAC18551.1| shikimate kinase [Corynebacterium efficiens YS-314]
Length = 169
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET- 154
V LVG A K+ +G+ LA AL DSD L+ E A G++ + F E E +++ E
Sbjct: 6 VVLVGPPGAGKSTIGRRLARALNADLVDSDELI-EKATGKACGEVFSELGEPAFRELEAH 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDV 194
V + L+ G VV G GA+ + + LLR +WIDV
Sbjct: 65 HVAEALNHDG--VVSLGGGAILTESTRELLREHDVVWIDV 102
>gi|343496019|ref|ZP_08734126.1| shikimate kinase I [Vibrio nigripulchritudo ATCC 27043]
gi|342821860|gb|EGU56626.1| shikimate kinase I [Vibrio nigripulchritudo ATCC 27043]
Length = 172
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L + DSD+++ E G + A F E G++Q E
Sbjct: 6 NIFLVGPMGAGKSTIGRHLAQQLHMEFVDSDTVIEERTGAD-IAWVFDVEGEDGFRQREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
V+ L+ +V+ G G+V+S N L G+ ++++
Sbjct: 65 AVINDLTEQQGIVLATGGGSVKSKENRNRLSARGVVVYLE 104
>gi|27468142|ref|NP_764779.1| shikimate kinase [Staphylococcus epidermidis ATCC 12228]
gi|251810954|ref|ZP_04825427.1| shikimate kinase [Staphylococcus epidermidis BCM-HMP0060]
gi|282876036|ref|ZP_06284903.1| shikimate kinase [Staphylococcus epidermidis SK135]
gi|420165534|ref|ZP_14672225.1| putative shikimate kinase [Staphylococcus epidermidis NIHLM088]
gi|420183201|ref|ZP_14689334.1| putative shikimate kinase [Staphylococcus epidermidis NIHLM049]
gi|420194836|ref|ZP_14700633.1| putative shikimate kinase [Staphylococcus epidermidis NIHLM021]
gi|420206143|ref|ZP_14711653.1| putative shikimate kinase [Staphylococcus epidermidis NIHLM008]
gi|420213999|ref|ZP_14719279.1| putative shikimate kinase [Staphylococcus epidermidis NIH05005]
gi|420216565|ref|ZP_14721771.1| putative shikimate kinase [Staphylococcus epidermidis NIH05001]
gi|420220485|ref|ZP_14725444.1| putative shikimate kinase [Staphylococcus epidermidis NIH04008]
gi|420221675|ref|ZP_14726602.1| shikimate kinase [Staphylococcus epidermidis NIH08001]
gi|420225735|ref|ZP_14730562.1| shikimate kinase [Staphylococcus epidermidis NIH06004]
gi|420229643|ref|ZP_14734348.1| shikimate kinase [Staphylococcus epidermidis NIH04003]
gi|420232054|ref|ZP_14736696.1| shikimate kinase [Staphylococcus epidermidis NIH051668]
gi|420234701|ref|ZP_14739261.1| shikimate kinase [Staphylococcus epidermidis NIH051475]
gi|421606968|ref|ZP_16048218.1| shikimate kinase [Staphylococcus epidermidis AU12-03]
gi|38604842|sp|Q8CSF2.1|AROK_STAES RecName: Full=Shikimate kinase; Short=SK
gi|82592631|sp|Q5HP11.2|AROK_STAEQ RecName: Full=Shikimate kinase; Short=SK
gi|27315688|gb|AAO04823.1|AE016748_57 shikimate kinase [Staphylococcus epidermidis ATCC 12228]
gi|251805464|gb|EES58121.1| shikimate kinase [Staphylococcus epidermidis BCM-HMP0060]
gi|281295061|gb|EFA87588.1| shikimate kinase [Staphylococcus epidermidis SK135]
gi|394235335|gb|EJD80907.1| putative shikimate kinase [Staphylococcus epidermidis NIHLM088]
gi|394249664|gb|EJD94877.1| putative shikimate kinase [Staphylococcus epidermidis NIHLM049]
gi|394263896|gb|EJE08617.1| putative shikimate kinase [Staphylococcus epidermidis NIHLM021]
gi|394277982|gb|EJE22299.1| putative shikimate kinase [Staphylococcus epidermidis NIHLM008]
gi|394283921|gb|EJE28082.1| putative shikimate kinase [Staphylococcus epidermidis NIH05005]
gi|394285838|gb|EJE29904.1| putative shikimate kinase [Staphylococcus epidermidis NIH04008]
gi|394290301|gb|EJE34165.1| shikimate kinase [Staphylococcus epidermidis NIH08001]
gi|394291738|gb|EJE35527.1| putative shikimate kinase [Staphylococcus epidermidis NIH05001]
gi|394293169|gb|EJE36892.1| shikimate kinase [Staphylococcus epidermidis NIH06004]
gi|394298937|gb|EJE42492.1| shikimate kinase [Staphylococcus epidermidis NIH04003]
gi|394301776|gb|EJE45230.1| shikimate kinase [Staphylococcus epidermidis NIH051668]
gi|394303944|gb|EJE47354.1| shikimate kinase [Staphylococcus epidermidis NIH051475]
gi|406657261|gb|EKC83650.1| shikimate kinase [Staphylococcus epidermidis AU12-03]
Length = 170
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 9/131 (6%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+ LVG KT +GK+L+D Y D D+ + E +S F + EKG++ ET
Sbjct: 8 IILVGFMGTGKTTVGKYLSDLYNLSYVDLDNFI-EVNECKSIPNIFNDIGEKGFRSLETR 66
Query: 156 VLKQLSSMGRL-VVCAGNGAVQSSANLALLRHGIS-LWIDVPPGMVARM----DHSGFPE 209
LK S + ++ G G ++ + +L LL++ +W+D ++ + H +
Sbjct: 67 YLK--SCLNTFDIISTGGGIIEDTNSLKLLKNQKHVVWLDCDIEIIFKRVKNDSHRPNAK 124
Query: 210 SEVLPQLFALY 220
S+ L QL ALY
Sbjct: 125 SKNLNQLDALY 135
>gi|57867056|ref|YP_188679.1| shikimate kinase [Staphylococcus epidermidis RP62A]
gi|57637714|gb|AAW54502.1| shikimate kinase [Staphylococcus epidermidis RP62A]
Length = 165
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 9/131 (6%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+ LVG KT +GK+L+D Y D D+ + E +S F + EKG++ ET
Sbjct: 3 IILVGFMGTGKTTVGKYLSDLYNLSYVDLDNFI-EVNECKSIPNIFNDIGEKGFRSLETR 61
Query: 156 VLKQLSSMGRL-VVCAGNGAVQSSANLALLRHGIS-LWIDVPPGMVARM----DHSGFPE 209
LK S + ++ G G ++ + +L LL++ +W+D ++ + H +
Sbjct: 62 YLK--SCLNTFDIISTGGGIIEDTNSLKLLKNQKHVVWLDCDIEIIFKRVKNDSHRPNAK 119
Query: 210 SEVLPQLFALY 220
S+ L QL ALY
Sbjct: 120 SKNLNQLDALY 130
>gi|118580776|ref|YP_902026.1| shikimate kinase [Pelobacter propionicus DSM 2379]
gi|118503486|gb|ABK99968.1| shikimate kinase [Pelobacter propionicus DSM 2379]
Length = 175
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 66/124 (53%), Gaps = 6/124 (4%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++F+VG + KT +G+ LA AL + D+D + E + A+ + +G+++ E+
Sbjct: 5 TIFIVGARASGKTTIGQSLAQALGCGFVDTDQHMLETT-SLTVAEVVEKEGWEGFRRRES 63
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPG-MVARMDHSGFPESEV 212
E L+ ++ G +VV G G V S AN +R +G L++ P + AR++ + PE
Sbjct: 64 EALRAVTRPG-MVVATGGGMVLSEANRQFMRDNGTVLYLSAPASVLAARLEAN--PEEAQ 120
Query: 213 LPQL 216
P L
Sbjct: 121 RPTL 124
>gi|16272170|ref|NP_438376.1| shikimate kinase [Haemophilus influenzae Rd KW20]
gi|145628514|ref|ZP_01784314.1| shikimate kinase [Haemophilus influenzae 22.1-21]
gi|145639734|ref|ZP_01795336.1| shikimate kinase [Haemophilus influenzae PittII]
gi|148827345|ref|YP_001292098.1| shikimate kinase [Haemophilus influenzae PittGG]
gi|260580911|ref|ZP_05848735.1| shikimate kinase [Haemophilus influenzae RdAW]
gi|260582426|ref|ZP_05850218.1| shikimate kinase [Haemophilus influenzae NT127]
gi|319775923|ref|YP_004138411.1| shikimate kinase I [Haemophilus influenzae F3047]
gi|319898172|ref|YP_004136369.1| shikimate kinase i [Haemophilus influenzae F3031]
gi|329123784|ref|ZP_08252342.1| shikimate kinase [Haemophilus aegyptius ATCC 11116]
gi|378696336|ref|YP_005178294.1| shikimate kinase I [Haemophilus influenzae 10810]
gi|1168515|sp|P43880.1|AROK_HAEIN RecName: Full=Shikimate kinase; Short=SK
gi|166219246|sp|A5UG09.1|AROK_HAEIG RecName: Full=Shikimate kinase; Short=SK
gi|1573166|gb|AAC21875.1| shikimic acid kinase I (aroK) [Haemophilus influenzae Rd KW20]
gi|144978984|gb|EDJ88670.1| shikimate kinase [Haemophilus influenzae 22.1-21]
gi|145271102|gb|EDK11017.1| shikimate kinase [Haemophilus influenzae PittII]
gi|148718587|gb|ABQ99714.1| shikimate kinase [Haemophilus influenzae PittGG]
gi|260092400|gb|EEW76339.1| shikimate kinase [Haemophilus influenzae RdAW]
gi|260094577|gb|EEW78473.1| shikimate kinase [Haemophilus influenzae NT127]
gi|301168859|emb|CBW28450.1| shikimate kinase I [Haemophilus influenzae 10810]
gi|309750376|gb|ADO80360.1| Shikimate kinase I [Haemophilus influenzae R2866]
gi|317433678|emb|CBY82065.1| shikimate kinase I [Haemophilus influenzae F3031]
gi|317450514|emb|CBY86731.1| shikimate kinase I [Haemophilus influenzae F3047]
gi|327469271|gb|EGF14742.1| shikimate kinase [Haemophilus aegyptius ATCC 11116]
Length = 180
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L + DSD+++ E G + + F E G+++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRQLAQQLNMDFIDSDAVIEERTGAD-ISWIFDLEGEDGFRKREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
++ +L+ M +V+ G GAV S N L GI ++++
Sbjct: 65 RIINELTQMQGIVLSTGGGAVLSKENRNYLSARGIVIYLE 104
>gi|163803104|ref|ZP_02196988.1| shikimate kinase I [Vibrio sp. AND4]
gi|159173096|gb|EDP57928.1| shikimate kinase I [Vibrio sp. AND4]
Length = 172
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L + DSD+++ E G + A F E+G+++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRHLAQQLHMEFMDSDTVIEERTGAD-IAWVFDVEGEEGFRKREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
VL+ L+ +V+ G G+V S N L G+ ++++
Sbjct: 65 SVLEDLTQEQGIVLATGGGSVMSKENRNRLSARGVVVYLE 104
>gi|68248812|ref|YP_247924.1| shikimate kinase [Haemophilus influenzae 86-028NP]
gi|145633784|ref|ZP_01789508.1| shikimate kinase [Haemophilus influenzae 3655]
gi|145635643|ref|ZP_01791340.1| shikimate kinase [Haemophilus influenzae PittAA]
gi|145637371|ref|ZP_01793031.1| shikimate kinase [Haemophilus influenzae PittHH]
gi|145641547|ref|ZP_01797125.1| shikimate kinase [Haemophilus influenzae R3021]
gi|229845199|ref|ZP_04465333.1| shikimate kinase [Haemophilus influenzae 6P18H1]
gi|229847382|ref|ZP_04467483.1| shikimate kinase [Haemophilus influenzae 7P49H1]
gi|81336774|sp|Q4QNY3.1|AROK_HAEI8 RecName: Full=Shikimate kinase; Short=SK
gi|68057011|gb|AAX87264.1| shikimate kinase [Haemophilus influenzae 86-028NP]
gi|144985355|gb|EDJ92185.1| shikimate kinase [Haemophilus influenzae 3655]
gi|145267116|gb|EDK07123.1| shikimate kinase [Haemophilus influenzae PittAA]
gi|145269463|gb|EDK09406.1| shikimate kinase [Haemophilus influenzae PittHH]
gi|145273838|gb|EDK13706.1| shikimate kinase [Haemophilus influenzae 22.4-21]
gi|229809708|gb|EEP45433.1| shikimate kinase [Haemophilus influenzae 7P49H1]
gi|229811910|gb|EEP47605.1| shikimate kinase [Haemophilus influenzae 6P18H1]
Length = 180
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L + DSD+++ E G + + F E G+++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRQLAQQLNMDFIDSDAVIEERTGAD-ISWIFDLEGEDGFRKREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
++ +L+ M +V+ G GAV S N L GI ++++
Sbjct: 65 RIINELTQMQGIVLSTGGGAVLSKENRNYLSARGIVIYLE 104
>gi|424836154|ref|ZP_18260811.1| shikimate kinase [Clostridium sporogenes PA 3679]
gi|365977556|gb|EHN13655.1| shikimate kinase [Clostridium sporogenes PA 3679]
Length = 170
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 61/110 (55%), Gaps = 3/110 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L+GM + K+ LG+ L+ L+Y + D+D L+ E G+S + F+ E +++ E
Sbjct: 3 NIILIGMPLSGKSTLGRELSKILKYDFIDTDILI-EEIEGKSIKEIFKIYGEDYFREKEL 61
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVP-PGMVARM 202
E++ +L V+ G G + N+ L++ G ++++ VP ++ RM
Sbjct: 62 EIINKLKKENNKVISTGGGLPIYNGNIYKLKNIGFTVYLKVPLEELIKRM 111
>gi|390951135|ref|YP_006414894.1| shikimate kinase [Thiocystis violascens DSM 198]
gi|390427704|gb|AFL74769.1| shikimate kinase [Thiocystis violascens DSM 198]
Length = 174
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 58/107 (54%), Gaps = 2/107 (1%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
++ ++F+VG A K+ +G+ L+++L Y + DSD + + G F E+G++
Sbjct: 2 MRAQNIFIVGPMGAGKSTVGRQLSESLSYTFKDSDQEI-QRRTGVDIPTIFEFEGEEGFR 60
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLA-LLRHGISLWIDVPP 196
E +V+++L S R+V+ G GA+ + N L G+ +++ P
Sbjct: 61 NRERQVIEELVSEERIVLATGGGAILNPENRQNLSSRGVVIYLHCSP 107
>gi|449137737|ref|ZP_21773051.1| shikimate kinase II [Rhodopirellula europaea 6C]
gi|448883669|gb|EMB14188.1| shikimate kinase II [Rhodopirellula europaea 6C]
Length = 186
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 55/115 (47%), Gaps = 3/115 (2%)
Query: 90 ELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGY 149
E+K ++L G K+ L K LA L D D V E+ G+S A+ F E E G+
Sbjct: 5 EVKPQHLYLTGYRGCGKSTLAKLLAQKLSLPAVDLDD-VIESTAGKSIAEIFAEETEVGF 63
Query: 150 QQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPG-MVARM 202
+ E L +++ V+ G G + AN ++ G +W+D P +VAR+
Sbjct: 64 RDREEAALVEVAKRPTHVIALGGGTILREANRNIIAGSGWCVWLDAEPEILVARL 118
>gi|406998900|gb|EKE16732.1| Shikimate kinase [uncultured bacterium]
Length = 167
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 104 AIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEVLKQLSSM 163
A KT +G+ LA L +++DSD + E G F E+G+++ ET+ + +LS
Sbjct: 3 AGKTTVGRQLARRLGRHFYDSDHEIVERTG-VLIPTIFEIEGEEGFRRRETQTIAELSES 61
Query: 164 GRLVVCAGNGAVQSSANLALLRH-GISLWIDVPPGMV 199
+V+ G GAV + N +L G ++++VPP ++
Sbjct: 62 NNIVLATGGGAVLNPENRKVLHETGWCVYLNVPPALL 98
>gi|402848015|ref|ZP_10896283.1| Shikimate kinase I [Rhodovulum sp. PH10]
gi|402501810|gb|EJW13454.1| Shikimate kinase I [Rhodovulum sp. PH10]
Length = 205
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 2/111 (1%)
Query: 84 AADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRE 143
AA I L S+ L+GM A K+ +G+ LA L + D+D+ + E A G S F
Sbjct: 16 AAAIVAGLGDRSLVLIGMMGAGKSSVGRRLAARLGLPFVDADTEI-ETAAGMSIPDIFAT 74
Query: 144 SDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALL-RHGISLWID 193
E ++ E V+ +L + G V+ G GA + AL+ G+S+W++
Sbjct: 75 HGEAYFRAGEARVITRLLADGPRVLATGGGAFMNDGTRALIAARGVSVWLE 125
>gi|350563406|ref|ZP_08932228.1| Shikimate kinase [Thioalkalimicrobium aerophilum AL3]
gi|349779270|gb|EGZ33617.1| Shikimate kinase [Thioalkalimicrobium aerophilum AL3]
Length = 175
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
S+FLVG A K+ +G+ LA+ L Y + DSD + EA G + F E G++ E+
Sbjct: 5 SIFLVGPMGAGKSTVGRILAEKLGYEFIDSDHEI-EARTGVTIPVIFDIEGEGGFRARES 63
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSAN 180
V+ ++ + LV+ G GAV S+ N
Sbjct: 64 AVIDDITQLPGLVLATGGGAVLSADN 89
>gi|383318083|ref|YP_005378925.1| shikimate kinase [Frateuria aurantia DSM 6220]
gi|379045187|gb|AFC87243.1| shikimate kinase [Frateuria aurantia DSM 6220]
Length = 182
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 2/100 (2%)
Query: 94 TSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAE 153
+++FLVG + A KT +G+ LA R + D D + E G A F E G++ E
Sbjct: 5 SNLFLVGPSGAGKTSIGRLLAAHYRLEFIDLD-IEIEKHTGAPVAAVFELEGESGFRSRE 63
Query: 154 TEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWI 192
+++L Q S +++ G GAV N LR G+ +W+
Sbjct: 64 SDLLDQFSQRQGILLSTGAGAVLDPRNGQRLRERGLVIWL 103
>gi|270157381|ref|ZP_06186038.1| shikimate kinase [Legionella longbeachae D-4968]
gi|289164223|ref|YP_003454361.1| shikimate kinase I [Legionella longbeachae NSW150]
gi|269989406|gb|EEZ95660.1| shikimate kinase [Legionella longbeachae D-4968]
gi|288857396|emb|CBJ11224.1| shikimate kinase I [Legionella longbeachae NSW150]
Length = 175
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
+K ++FL+G A K+ +G+ LA L+ +FDSD ++ E AG + + F E+G++
Sbjct: 4 VKVRNIFLIGPMGAGKSTIGRALAKELKLEFFDSDEVIEERAGAD-ISWIFDIEGEEGFR 62
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSAN 180
+ E +V+ +L+ +V+ G G V + N
Sbjct: 63 RREQKVIDELTQKTNIVLATGGGVVITPEN 92
>gi|393769157|ref|ZP_10357685.1| shikimate kinase [Methylobacterium sp. GXF4]
gi|392725398|gb|EIZ82735.1| shikimate kinase [Methylobacterium sp. GXF4]
Length = 203
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 75/156 (48%), Gaps = 15/156 (9%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
S+ LVG+ A K+ +G+ LA L + D+DS + EAA G + F E ++ E
Sbjct: 26 SIVLVGLMGAGKSTVGRRLASRLGLIFKDADSEI-EAAAGLTIPDIFAIYGEPSFRDGEE 84
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVPPGMVAR---------MDH 204
V+ +L G LV+ G GA A A +R IS+W+ ++ R + H
Sbjct: 85 RVISRLLRAGPLVLATGGGAYLREATRARIRESAISVWLKADLDVLMRRVRKRGNRPLLH 144
Query: 205 SGFPESEVLPQLFALYKEMRDGYATADVTVSLQKVA 240
+ PE+ + L A+ + YA ADV V ++V+
Sbjct: 145 TEDPEA-TMRDLMAVRHPV---YAAADVVVISREVS 176
>gi|238760016|ref|ZP_04621168.1| Shikimate kinase 2 [Yersinia aldovae ATCC 35236]
gi|238701769|gb|EEP94334.1| Shikimate kinase 2 [Yersinia aldovae ATCC 35236]
Length = 195
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 72/141 (51%), Gaps = 8/141 (5%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++F+VG A KT +GK LA AL Y + D+DS + ++ A RE + G++ E+
Sbjct: 25 TIFMVGARGAGKTTIGKALAQALGYRFIDTDSFMQQSLQMTVADVVAREGWD-GFRLRES 83
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPG-MVARMDHSGFPESEV 212
L+ +++ + VV G GAV + N +R HG+ L++ +V R+ PE
Sbjct: 84 MALQTVTA-PKTVVATGGGAVLARENRTFMRNHGLVLYLRASANVLVERLTEE--PEDAQ 140
Query: 213 LPQLFA--LYKEMRDGYATAD 231
P L + E+RD A+ +
Sbjct: 141 RPSLTGKPIVDEIRDVLASRE 161
>gi|148244686|ref|YP_001219380.1| shikimate kinase I [Candidatus Vesicomyosocius okutanii HA]
gi|146326513|dbj|BAF61656.1| shikimate kinase I [Candidatus Vesicomyosocius okutanii HA]
Length = 174
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFE--AAGGESAAKAFRESDEKGYQQA 152
++ LVG + KT +G+ LA L +FDSD FE A G S F EKG+++
Sbjct: 8 NIILVGPMGSGKTSVGRRLACILNRDFFDSD---FEIVARTGVSINHIFDVEGEKGFRKR 64
Query: 153 ETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHG 187
E ++L L + +V+ G G V + N +L+ G
Sbjct: 65 EMQILADLCEIKHIVIATGGGIVINPQNRKILKQG 99
>gi|418300542|ref|ZP_12912363.1| shikimate kinase [Agrobacterium tumefaciens CCNWGS0286]
gi|355533381|gb|EHH02714.1| shikimate kinase [Agrobacterium tumefaciens CCNWGS0286]
Length = 193
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 78/156 (50%), Gaps = 9/156 (5%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ VG+ A K+ +G+ +A L+ + D+D + E + ++ F E+ ++ ET
Sbjct: 24 NIVFVGLMGAGKSAVGRMVAQQLKVPFIDTD-VEIERVSRMTISELFATYGEEEFRALET 82
Query: 155 EVLKQLSSMGRLVVCAGNGA-VQSSANLALLRHGISLW----IDVPPGMVARMDHSGFPE 209
V+K+L G V+ G GA + + + R GIS W ++V V + DH +
Sbjct: 83 RVIKRLLRGGPKVISTGGGAFINDNTRRHITRGGISFWLKADLEVLWERVNKRDHRPLLK 142
Query: 210 SEVLPQ--LFALYKEMRDGYATADVTVSLQKVASQL 243
+E P+ L AL ++ YA AD+T+ + V ++
Sbjct: 143 TEN-PKATLAALMEKRYPIYAEADMTIESRDVRKEI 177
>gi|225872603|ref|YP_002754058.1| shikimate kinase [Acidobacterium capsulatum ATCC 51196]
gi|225792249|gb|ACO32339.1| shikimate kinase domain protein [Acidobacterium capsulatum ATCC
51196]
Length = 209
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 62/124 (50%), Gaps = 6/124 (4%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+V L G A KT LG+ LA L + + D D+ + + +G + A FR E G++ E
Sbjct: 30 AVVLTGFMGAGKTTLGRLLAAELGWEFRDLDTEIAQDSG-MTVADIFRAEGEAGFRAREM 88
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSA---NLALLRHGISLWIDVP-PGMVAR-MDHSGFPE 209
E+L +L R+V+ G GAV+S LA + +++ P +V R ++ G E
Sbjct: 89 EMLARLLRRERMVLALGGGAVESEGVREQLAACKDACVVYLSAPLEALVQRCLEQPGAAE 148
Query: 210 SEVL 213
VL
Sbjct: 149 RPVL 152
>gi|365873068|ref|ZP_09412601.1| 3-dehydroquinate synthetase [Thermanaerovibrio velox DSM 12556]
gi|363983155|gb|EHM09362.1| 3-dehydroquinate synthetase [Thermanaerovibrio velox DSM 12556]
Length = 524
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 69/151 (45%), Gaps = 8/151 (5%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
VFL G + KT +G+ LA + + D D +V E + + FR E+ ++ E E
Sbjct: 10 VFLTGFMGSGKTTVGRELARLMGVPFLDLDRMV-EMGSRLTVEEIFRRGGEESFRALERE 68
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMVARM---DHSGFPESE 211
L Q +GR VV G G + NL +R G + + VP + +R D ES
Sbjct: 69 ALLQTLGLGRCVVALGGGTLMDPRNLEAVRSSGRLVALKVPLDVASRRIGGDVRPPMESS 128
Query: 212 VLPQLFALYKEMRDGYATADVTVSLQKVASQ 242
L +LF + R GY A++ V + ++
Sbjct: 129 SLEELF---EARRRGYEAAEIEVGTHRTGAR 156
>gi|365131768|ref|ZP_09341933.1| shikimate 5-dehydrogenase [Subdoligranulum sp. 4_3_54A2FAA]
gi|363618165|gb|EHL69520.1| shikimate 5-dehydrogenase [Subdoligranulum sp. 4_3_54A2FAA]
Length = 416
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 60/117 (51%), Gaps = 4/117 (3%)
Query: 87 ISTELKG--TSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRES 144
I +L+G +++ LVGM + K+ LGK A L + D D ++ E GG +
Sbjct: 245 IDRKLRGKLSNLVLVGMPGSGKSSLGKACAKLLGKRFVDMDDVLVERIGG-PISSILSPG 303
Query: 145 DEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMVA 200
+E ++ E+ V +L V+ G GAV + N+ LR +G+ ++ID P G +A
Sbjct: 304 NETPFRNLESAVAAELGKENGQVIATGGGAVLRAQNVRALRQNGVVVYIDRPLGQLA 360
>gi|312264984|gb|ADQ55488.1| shikimate kinase I [uncultured organism]
Length = 176
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
++ ++FL+GM+ K+ +GK LA+ L+ ++DSD ++ + G E + E +E G++
Sbjct: 6 IRSRNIFLIGMSGVGKSTIGKQLANELKMVFYDSDEIIEKRCGAEISWILDIEGEE-GFR 64
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALL 184
+ E++++ + + +V+ G+G V +N L
Sbjct: 65 KRESDIIYEFTEKKGIVLATGSGVVLKKSNCNRL 98
>gi|308048043|ref|YP_003911609.1| shikimate kinase [Ferrimonas balearica DSM 9799]
gi|307630233|gb|ADN74535.1| Shikimate kinase [Ferrimonas balearica DSM 9799]
Length = 171
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L +FDSD + EA G + F E+G++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRHLAQMLHLEFFDSDQEI-EARSGADISWIFDVEGEEGFRNREA 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSS 178
V+ +L+ +V+ G G+VQS
Sbjct: 65 RVIHELTEKQGIVLATGGGSVQSK 88
>gi|260770883|ref|ZP_05879812.1| shikimate kinase I [Vibrio furnissii CIP 102972]
gi|375129755|ref|YP_004991853.1| shikimate kinase I [Vibrio furnissii NCTC 11218]
gi|260614120|gb|EEX39310.1| shikimate kinase I [Vibrio furnissii CIP 102972]
gi|315178927|gb|ADT85841.1| shikimate kinase I [Vibrio furnissii NCTC 11218]
Length = 172
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L + DSD+++ E G + A F E+G+++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRHLAQQLHMEFVDSDTVIEERTGAD-IAWVFDVEGEEGFRKREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
V+ L+ +V+ G G+V+S N L GI ++++
Sbjct: 65 AVINDLTEEQGIVLATGGGSVKSKENRNRLSARGIVVYLE 104
>gi|423082582|ref|ZP_17071171.1| shikimate kinase [Clostridium difficile 002-P50-2011]
gi|423087123|ref|ZP_17075513.1| shikimate kinase [Clostridium difficile 050-P50-2011]
gi|357545372|gb|EHJ27347.1| shikimate kinase [Clostridium difficile 050-P50-2011]
gi|357547700|gb|EHJ29575.1| shikimate kinase [Clostridium difficile 002-P50-2011]
Length = 177
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 83/172 (48%), Gaps = 11/172 (6%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+ L+GM + KT +GK LA + D D + + + +S A+ F E E ++ ET+
Sbjct: 9 LILIGMPGSGKTTIGKLLAKEYNCSFCDMDDYIIQISQ-KSIAELFSEG-EDIFRNYETQ 66
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVPPGMVARMDHSGFPESEVLP 214
++LS + V+ G G ++ N+ +L+ GI ++ID P + ++ +L
Sbjct: 67 ACRELSISDKTVISTGGGVIKKDVNMEILKETGIIIFIDRPIQKI--LEDININSRPLLK 124
Query: 215 ----QLFALYKEMRDGYAT-ADVTVSLQKVASQLGYDDLDAVTTEDMTLEVK 261
+L+ LY E + Y +D+ + K + Y+ +AV +E+ E K
Sbjct: 125 NGKDRLYNLYNERINLYKKFSDIEILNDKSLNNAIYNITNAV-SENFKFEFK 175
>gi|336123137|ref|YP_004565185.1| Shikimate kinase [Vibrio anguillarum 775]
gi|365538491|ref|ZP_09363666.1| shikimate kinase I [Vibrio ordalii ATCC 33509]
gi|335340860|gb|AEH32143.1| Shikimate kinase [Vibrio anguillarum 775]
Length = 173
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L + DSD+++ E G + A F E+G+++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRHLAQQLHMEFLDSDTVIEERTGAD-IAWVFDVEGEEGFRKREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
V+ L+ +V+ G G+V+S N L GI ++++
Sbjct: 65 AVINDLTEKQGIVLATGGGSVKSKENRNRLSARGIVVYLE 104
>gi|114321908|ref|YP_743591.1| shikimate kinase [Alkalilimnicola ehrlichii MLHE-1]
gi|114228302|gb|ABI58101.1| shikimate kinase [Alkalilimnicola ehrlichii MLHE-1]
Length = 179
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 2/101 (1%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
++L+G A K+ +G+ LADAL + DSD + E G + F E G+++ E +
Sbjct: 7 IYLIGPMGAGKSTVGRRLADALGLPFEDSDRYIVERTGVD-IPTIFDIEGEAGFRKREHD 65
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALL-RHGISLWIDVP 195
++ L+ LV+ G G V + AN LL GI +++ P
Sbjct: 66 AIRTLTEREELVLATGGGVVTTPANRDLLGARGIVVYLYTP 106
>gi|404493818|ref|YP_006717924.1| shikimate kinase [Pelobacter carbinolicus DSM 2380]
gi|115312134|sp|Q3A2J4.1|AROK2_PELCD RecName: Full=Shikimate kinase 2; Short=SK 2
gi|77545851|gb|ABA89413.1| shikimate kinase [Pelobacter carbinolicus DSM 2380]
Length = 172
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 66/124 (53%), Gaps = 6/124 (4%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++F+VG A KT +G+ LA+AL Y + D+D + E A E E G+++ E+
Sbjct: 4 TIFMVGARAAGKTTIGQALANALSYPFVDTDLYMLETTNLTVADVVVTEGWE-GFRRRES 62
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMV-ARMDHSGFPESEV 212
E L+ ++ G +VV G G V S N +R +G ++ P ++ AR++ +P++
Sbjct: 63 EALRTVTKPG-IVVATGGGMVLSEENRDFMRANGTVFYLSAPAEVLAARLE--AYPDAGQ 119
Query: 213 LPQL 216
P L
Sbjct: 120 RPTL 123
>gi|46579305|ref|YP_010113.1| shikimate kinase [Desulfovibrio vulgaris str. Hildenborough]
gi|120603135|ref|YP_967535.1| shikimate kinase [Desulfovibrio vulgaris DP4]
gi|387152688|ref|YP_005701624.1| shikimate kinase [Desulfovibrio vulgaris RCH1]
gi|81404948|sp|Q72DN7.1|AROK_DESVH RecName: Full=Shikimate kinase; Short=SK
gi|46448719|gb|AAS95372.1| shikimate kinase [Desulfovibrio vulgaris str. Hildenborough]
gi|120563364|gb|ABM29108.1| shikimate kinase [Desulfovibrio vulgaris DP4]
gi|311233132|gb|ADP85986.1| Shikimate kinase [Desulfovibrio vulgaris RCH1]
Length = 175
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 67/125 (53%), Gaps = 5/125 (4%)
Query: 94 TSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAE 153
VFL+G + K+ +G+ LA L + + D+D++V AG + A E ++ E
Sbjct: 6 CRVFLIGGRASGKSTVGRALAARLGWDFADTDAMVTRRAGCD-IATLVAERGWDAFRDME 64
Query: 154 TEVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVPPGMV-ARMDHSGFPESE 211
++ L+ ++ R+VV G G V + N ALLR G+++++ +P +V AR+ + PE
Sbjct: 65 SDALRDAAARERVVVATGGGMVLRAENRALLREAGVTVFLSLPVEVVAARLARN--PEHG 122
Query: 212 VLPQL 216
P L
Sbjct: 123 QRPSL 127
>gi|220921140|ref|YP_002496441.1| shikimate kinase [Methylobacterium nodulans ORS 2060]
gi|219945746|gb|ACL56138.1| shikimate kinase [Methylobacterium nodulans ORS 2060]
Length = 200
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 2/119 (1%)
Query: 75 DPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGG 134
DPS + A + L S+ LVG+ A K+ +G+ LA L + D+D + EAA G
Sbjct: 3 DPSPPDETIEARVRRGLGQRSIVLVGLMGAGKSTVGRRLAGRLGMIFMDADHEI-EAAAG 61
Query: 135 ESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGA-VQSSANLALLRHGISLWI 192
+ A F E ++ E V+ +L G +V+ G GA ++ + G+S+W+
Sbjct: 62 LTIADIFAIYGETSFRDGEERVIARLLRDGPMVLATGGGAFMRPETRRRIAERGVSVWL 120
>gi|69247993|ref|ZP_00604574.1| Shikimate kinase [Enterococcus faecium DO]
gi|257878446|ref|ZP_05658099.1| shikimate kinase [Enterococcus faecium 1,230,933]
gi|257882864|ref|ZP_05662517.1| shikimate kinase [Enterococcus faecium 1,231,502]
gi|257889357|ref|ZP_05669010.1| shikimate kinase [Enterococcus faecium 1,231,410]
gi|257894369|ref|ZP_05674022.1| shikimate kinase [Enterococcus faecium 1,231,408]
gi|260560033|ref|ZP_05832211.1| shikimate kinase [Enterococcus faecium C68]
gi|261207479|ref|ZP_05922165.1| shikimate kinase [Enterococcus faecium TC 6]
gi|289565890|ref|ZP_06446331.1| shikimate kinase [Enterococcus faecium D344SRF]
gi|293559981|ref|ZP_06676489.1| shikimate kinase [Enterococcus faecium E1162]
gi|294621058|ref|ZP_06700250.1| shikimate kinase [Enterococcus faecium U0317]
gi|314937808|ref|ZP_07845125.1| shikimate kinase [Enterococcus faecium TX0133a04]
gi|314941646|ref|ZP_07848526.1| shikimate kinase [Enterococcus faecium TX0133C]
gi|314948893|ref|ZP_07852262.1| shikimate kinase [Enterococcus faecium TX0082]
gi|314950989|ref|ZP_07854056.1| shikimate kinase [Enterococcus faecium TX0133A]
gi|314992990|ref|ZP_07858386.1| shikimate kinase [Enterococcus faecium TX0133B]
gi|314996437|ref|ZP_07861480.1| shikimate kinase [Enterococcus faecium TX0133a01]
gi|383328895|ref|YP_005354779.1| shikimate kinase [Enterococcus faecium Aus0004]
gi|389868771|ref|YP_006376194.1| shikimate kinase [Enterococcus faecium DO]
gi|424792373|ref|ZP_18218610.1| shikimate kinase [Enterococcus faecium V689]
gi|424802731|ref|ZP_18228205.1| shikimate kinase [Enterococcus faecium S447]
gi|424825939|ref|ZP_18250890.1| shikimate kinase [Enterococcus faecium R501]
gi|424852820|ref|ZP_18277205.1| shikimate kinase [Enterococcus faecium R499]
gi|424869070|ref|ZP_18292793.1| shikimate kinase [Enterococcus faecium R497]
gi|424938843|ref|ZP_18354607.1| shikimate kinase [Enterococcus faecium R496]
gi|424953575|ref|ZP_18368527.1| shikimate kinase [Enterococcus faecium R494]
gi|424958925|ref|ZP_18373540.1| shikimate kinase [Enterococcus faecium R446]
gi|424959202|ref|ZP_18373802.1| shikimate kinase [Enterococcus faecium P1986]
gi|424966008|ref|ZP_18379880.1| shikimate kinase [Enterococcus faecium P1190]
gi|424968721|ref|ZP_18382324.1| shikimate kinase [Enterococcus faecium P1140]
gi|424971927|ref|ZP_18385325.1| shikimate kinase [Enterococcus faecium P1139]
gi|424973215|ref|ZP_18386504.1| shikimate kinase [Enterococcus faecium P1137]
gi|424980410|ref|ZP_18393205.1| shikimate kinase [Enterococcus faecium ERV99]
gi|424985452|ref|ZP_18397926.1| shikimate kinase [Enterococcus faecium ERV69]
gi|424986766|ref|ZP_18399170.1| shikimate kinase [Enterococcus faecium ERV38]
gi|424995094|ref|ZP_18406992.1| shikimate kinase [Enterococcus faecium ERV168]
gi|424998676|ref|ZP_18410347.1| shikimate kinase [Enterococcus faecium ERV165]
gi|425002321|ref|ZP_18413756.1| shikimate kinase [Enterococcus faecium ERV161]
gi|425005983|ref|ZP_18417180.1| shikimate kinase [Enterococcus faecium ERV102]
gi|425006537|ref|ZP_18417709.1| shikimate kinase [Enterococcus faecium ERV1]
gi|425010597|ref|ZP_18421537.1| shikimate kinase [Enterococcus faecium E422]
gi|425015096|ref|ZP_18425737.1| shikimate kinase [Enterococcus faecium E417]
gi|425016850|ref|ZP_18427391.1| shikimate kinase [Enterococcus faecium C621]
gi|425020544|ref|ZP_18430847.1| shikimate kinase [Enterococcus faecium C497]
gi|425027886|ref|ZP_18435138.1| shikimate kinase [Enterococcus faecium C1904]
gi|425030786|ref|ZP_18435947.1| shikimate kinase [Enterococcus faecium 515]
gi|425037151|ref|ZP_18441837.1| shikimate kinase [Enterococcus faecium 514]
gi|425038428|ref|ZP_18443044.1| shikimate kinase [Enterococcus faecium 513]
gi|425043394|ref|ZP_18447635.1| shikimate kinase [Enterococcus faecium 511]
gi|425044425|ref|ZP_18448586.1| shikimate kinase [Enterococcus faecium 510]
gi|425048834|ref|ZP_18452716.1| shikimate kinase [Enterococcus faecium 509]
gi|425051858|ref|ZP_18455498.1| shikimate kinase [Enterococcus faecium 506]
gi|425060269|ref|ZP_18463566.1| shikimate kinase [Enterococcus faecium 503]
gi|430844016|ref|ZP_19461914.1| shikimate kinase [Enterococcus faecium E1050]
gi|430846017|ref|ZP_19463882.1| shikimate kinase [Enterococcus faecium E1133]
gi|430854838|ref|ZP_19472550.1| shikimate kinase [Enterococcus faecium E1392]
gi|431541924|ref|ZP_19518153.1| shikimate kinase [Enterococcus faecium E1731]
gi|431750095|ref|ZP_19538822.1| shikimate kinase [Enterococcus faecium E2297]
gi|431754840|ref|ZP_19543500.1| shikimate kinase [Enterococcus faecium E2883]
gi|431767214|ref|ZP_19555669.1| shikimate kinase [Enterococcus faecium E1321]
gi|431770840|ref|ZP_19559236.1| shikimate kinase [Enterococcus faecium E1644]
gi|431772295|ref|ZP_19560636.1| shikimate kinase [Enterococcus faecium E2369]
gi|431775762|ref|ZP_19564032.1| shikimate kinase [Enterococcus faecium E2560]
gi|431778806|ref|ZP_19567012.1| shikimate kinase [Enterococcus faecium E4389]
gi|431781878|ref|ZP_19570018.1| shikimate kinase [Enterococcus faecium E6012]
gi|431785745|ref|ZP_19573768.1| shikimate kinase [Enterococcus faecium E6045]
gi|68194608|gb|EAN09097.1| Shikimate kinase [Enterococcus faecium DO]
gi|257812674|gb|EEV41432.1| shikimate kinase [Enterococcus faecium 1,230,933]
gi|257818522|gb|EEV45850.1| shikimate kinase [Enterococcus faecium 1,231,502]
gi|257825717|gb|EEV52343.1| shikimate kinase [Enterococcus faecium 1,231,410]
gi|257830748|gb|EEV57355.1| shikimate kinase [Enterococcus faecium 1,231,408]
gi|260073868|gb|EEW62192.1| shikimate kinase [Enterococcus faecium C68]
gi|260078370|gb|EEW66075.1| shikimate kinase [Enterococcus faecium TC 6]
gi|289162350|gb|EFD10209.1| shikimate kinase [Enterococcus faecium D344SRF]
gi|291599372|gb|EFF30397.1| shikimate kinase [Enterococcus faecium U0317]
gi|291606069|gb|EFF35495.1| shikimate kinase [Enterococcus faecium E1162]
gi|313589419|gb|EFR68264.1| shikimate kinase [Enterococcus faecium TX0133a01]
gi|313592513|gb|EFR71358.1| shikimate kinase [Enterococcus faecium TX0133B]
gi|313596844|gb|EFR75689.1| shikimate kinase [Enterococcus faecium TX0133A]
gi|313599537|gb|EFR78380.1| shikimate kinase [Enterococcus faecium TX0133C]
gi|313642839|gb|EFS07419.1| shikimate kinase [Enterococcus faecium TX0133a04]
gi|313644683|gb|EFS09263.1| shikimate kinase [Enterococcus faecium TX0082]
gi|378938589|gb|AFC63661.1| shikimate kinase [Enterococcus faecium Aus0004]
gi|388534020|gb|AFK59212.1| shikimate kinase [Enterococcus faecium DO]
gi|402917736|gb|EJX38486.1| shikimate kinase [Enterococcus faecium V689]
gi|402919346|gb|EJX39955.1| shikimate kinase [Enterococcus faecium S447]
gi|402924932|gb|EJX45115.1| shikimate kinase [Enterococcus faecium R501]
gi|402933015|gb|EJX52475.1| shikimate kinase [Enterococcus faecium R499]
gi|402936055|gb|EJX55254.1| shikimate kinase [Enterococcus faecium R496]
gi|402936125|gb|EJX55323.1| shikimate kinase [Enterococcus faecium R497]
gi|402938331|gb|EJX57346.1| shikimate kinase [Enterococcus faecium R446]
gi|402938696|gb|EJX57681.1| shikimate kinase [Enterococcus faecium R494]
gi|402942088|gb|EJX60722.1| shikimate kinase [Enterococcus faecium P1190]
gi|402950822|gb|EJX68796.1| shikimate kinase [Enterococcus faecium P1140]
gi|402951072|gb|EJX69024.1| shikimate kinase [Enterococcus faecium P1986]
gi|402957052|gb|EJX74469.1| shikimate kinase [Enterococcus faecium P1139]
gi|402959060|gb|EJX76338.1| shikimate kinase [Enterococcus faecium P1137]
gi|402965887|gb|EJX82568.1| shikimate kinase [Enterococcus faecium ERV69]
gi|402966527|gb|EJX83151.1| shikimate kinase [Enterococcus faecium ERV99]
gi|402975761|gb|EJX91694.1| shikimate kinase [Enterococcus faecium ERV38]
gi|402978144|gb|EJX93906.1| shikimate kinase [Enterococcus faecium ERV168]
gi|402982375|gb|EJX97845.1| shikimate kinase [Enterococcus faecium ERV165]
gi|402983660|gb|EJX99039.1| shikimate kinase [Enterococcus faecium ERV161]
gi|402984502|gb|EJX99810.1| shikimate kinase [Enterococcus faecium ERV102]
gi|402996763|gb|EJY11127.1| shikimate kinase [Enterococcus faecium E417]
gi|402997069|gb|EJY11419.1| shikimate kinase [Enterococcus faecium ERV1]
gi|402999313|gb|EJY13510.1| shikimate kinase [Enterococcus faecium E422]
gi|403005130|gb|EJY18878.1| shikimate kinase [Enterococcus faecium C1904]
gi|403005928|gb|EJY19605.1| shikimate kinase [Enterococcus faecium C621]
gi|403009123|gb|EJY22591.1| shikimate kinase [Enterococcus faecium C497]
gi|403012055|gb|EJY25323.1| shikimate kinase [Enterococcus faecium 514]
gi|403017016|gb|EJY29797.1| shikimate kinase [Enterococcus faecium 515]
gi|403019533|gb|EJY32129.1| shikimate kinase [Enterococcus faecium 513]
gi|403020120|gb|EJY32679.1| shikimate kinase [Enterococcus faecium 511]
gi|403029652|gb|EJY41395.1| shikimate kinase [Enterococcus faecium 509]
gi|403029885|gb|EJY41609.1| shikimate kinase [Enterococcus faecium 510]
gi|403036418|gb|EJY47767.1| shikimate kinase [Enterococcus faecium 506]
gi|403042775|gb|EJY53718.1| shikimate kinase [Enterococcus faecium 503]
gi|430496606|gb|ELA72665.1| shikimate kinase [Enterococcus faecium E1050]
gi|430539837|gb|ELA80076.1| shikimate kinase [Enterococcus faecium E1133]
gi|430547717|gb|ELA87633.1| shikimate kinase [Enterococcus faecium E1392]
gi|430592971|gb|ELB30958.1| shikimate kinase [Enterococcus faecium E1731]
gi|430610568|gb|ELB47712.1| shikimate kinase [Enterococcus faecium E2297]
gi|430618668|gb|ELB55509.1| shikimate kinase [Enterococcus faecium E2883]
gi|430631222|gb|ELB67545.1| shikimate kinase [Enterococcus faecium E1321]
gi|430634489|gb|ELB70608.1| shikimate kinase [Enterococcus faecium E1644]
gi|430637983|gb|ELB73964.1| shikimate kinase [Enterococcus faecium E2369]
gi|430642410|gb|ELB78188.1| shikimate kinase [Enterococcus faecium E2560]
gi|430643467|gb|ELB79206.1| shikimate kinase [Enterococcus faecium E4389]
gi|430646904|gb|ELB82365.1| shikimate kinase [Enterococcus faecium E6045]
gi|430648279|gb|ELB83686.1| shikimate kinase [Enterococcus faecium E6012]
Length = 169
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
S+ L+G A KT +GK LA L+ Y D D+ + E S A+ F EK +++ E+
Sbjct: 3 SILLIGFMGAGKTTIGKGLAQCLQKEYVDLDTKIEEHIQL-SIAEYFHYYGEKSFRKVES 61
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR 185
++L++LS+ + ++ G G VQS+ N L+
Sbjct: 62 DILRKLSNEDK-IIATGGGIVQSAENRRFLK 91
>gi|410464929|ref|ZP_11318312.1| shikimate kinase [Desulfovibrio magneticus str. Maddingley MBC34]
gi|409981957|gb|EKO38463.1| shikimate kinase [Desulfovibrio magneticus str. Maddingley MBC34]
Length = 175
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
Query: 94 TSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAE 153
T+++L+G + KT LG+ LA++L + D D+ EA G E+ A +++AE
Sbjct: 7 TNIYLIGPRASGKTTLGRKLAESLGRPFVDLDARFVEARG-ETIADLVAREGWDAFRRAE 65
Query: 154 TEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVA 200
++L + ++ LV G G V N A+L G+ L++ P +A
Sbjct: 66 ADILAETAAQKGLVAATGGGVVLLPENRAILAKGLVLYLQAHPDRLA 112
>gi|339327467|ref|YP_004687160.1| shikimate kinase AroK [Cupriavidus necator N-1]
gi|338167624|gb|AEI78679.1| shikimate kinase AroK [Cupriavidus necator N-1]
Length = 283
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++F VG+ A KT +G+ +A L Y +FDSD EA G F E G++ E
Sbjct: 91 NLFFVGLMGAGKTTVGRTVARRLHYPFFDSDH-ELEAHCGVRIPVIFEVEGEAGFRDREA 149
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR 185
++++L++ +V+ G GAV + N +L+
Sbjct: 150 AMIRELAARQGIVLATGGGAVLRAENREVLK 180
>gi|304319750|ref|YP_003853393.1| shikimate kinase [Parvularcula bermudensis HTCC2503]
gi|303298653|gb|ADM08252.1| putative shikimate kinase [Parvularcula bermudensis HTCC2503]
Length = 188
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 70/145 (48%), Gaps = 7/145 (4%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
V L+G+ A KT +G+ LA+ L + D+D + E A S A F E +++ E +
Sbjct: 17 VVLIGLMGAGKTTVGRRLAELLALPFKDADEEI-EDAANMSVADIFETYGEGYFREGERK 75
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMVARMDHSG-----FPE 209
V+++L S G +V+ G GA ++A L++ IS+W+ ++ + +
Sbjct: 76 VIERLLSEGPMVLATGGGAFMNAATRELVKLKAISIWLRADLDLLVKRTAQKATRPLLQQ 135
Query: 210 SEVLPQLFALYKEMRDGYATADVTV 234
+ L L KE YA AD+ V
Sbjct: 136 GDAREILARLLKERAPVYAEADIVV 160
>gi|390451693|ref|ZP_10237262.1| shikimate kinase [Nitratireductor aquibiodomus RA22]
gi|389660709|gb|EIM72370.1| shikimate kinase [Nitratireductor aquibiodomus RA22]
Length = 206
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 57/113 (50%), Gaps = 4/113 (3%)
Query: 86 DISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESD 145
+++ L S+ VG+ A KT +G+ +ADAL+ + DSD + E + F
Sbjct: 14 NLAHRLGRRSLVFVGLMGAGKTVIGRRVADALKLPFIDSDHEI-ETVSRMTVPDLFAAYG 72
Query: 146 EKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSS-ANLALLRHGISLWI--DVP 195
E ++ E V+ +L G VV G GA S+ A+ R GIS+W+ D+P
Sbjct: 73 ESEFRSLERRVIARLLKSGPRVVSTGGGAFMSAQTRRAVARRGISVWLKADLP 125
>gi|336317360|ref|ZP_08572216.1| shikimate kinase [Rheinheimera sp. A13L]
gi|335878293|gb|EGM76236.1| shikimate kinase [Rheinheimera sp. A13L]
Length = 172
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 77/168 (45%), Gaps = 18/168 (10%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LAD L ++DSD + E G A F E+G++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRHLADMLHLEFYDSDQEI-ERRTGADIAWVFDLEGEEGFRVREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVP-PGMVARMD--------H 204
V+ L+ + +V+ G G+V S L GI ++++ P VAR
Sbjct: 65 NVISDLTELQGIVLATGGGSVLSKETRNRLSARGIVVYLETPIEKQVARTQRDKRRPLLQ 124
Query: 205 SGFPESEVLPQLFA----LYKEMRDGYATADVTVSL---QKVASQLGY 245
+ EVL +L A LY+E+ D D + ++ QLG+
Sbjct: 125 TEEAPKEVLERLAAERNPLYEEIADFTVRTDEQSARSVANQIVEQLGF 172
>gi|336393887|ref|ZP_08575286.1| Shikimate kinase [Lactobacillus coryniformis subsp. torquens KCTC
3535]
Length = 174
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
V LVG KT +G+ LA R D D+ + AA G+S + F +S E ++Q ET+
Sbjct: 4 VILVGFMGTGKTTVGEVLAANFRRPQIDLDAEIV-AAAGKSIKQIFADSGETAFRQLETQ 62
Query: 156 VLKQ-LSSMGRLVVCAGNGAVQSSANLALLRH 186
VL+Q + G ++ G G V+S+AN LL+
Sbjct: 63 VLQQAFAKSG--ILSTGGGVVESAANRKLLQQ 92
>gi|260596758|ref|YP_003209329.1| Shikimate kinase 2 [Cronobacter turicensis z3032]
gi|260215935|emb|CBA28532.1| Shikimate kinase 2 [Cronobacter turicensis z3032]
Length = 174
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 64/123 (52%), Gaps = 6/123 (4%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
++LVG KT G+ LA AL Y + D+D + E + A+ + G++ E+E
Sbjct: 5 IYLVGARGCGKTTTGEALARALAYGFADTDRWLLEQTQ-MTVAEVVEKEGWPGFRDRESE 63
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMVA-RMDHSGFPESEVL 213
L+ +++ VV G G V N +R HGI ++++VP ++A R++ FPE+
Sbjct: 64 ALQAVTAPA-TVVATGGGMVLRDENREFMRAHGIVIYLNVPVEVLAQRLE--AFPEAGQR 120
Query: 214 PQL 216
P L
Sbjct: 121 PTL 123
>gi|114320073|ref|YP_741756.1| shikimate kinase [Alkalilimnicola ehrlichii MLHE-1]
gi|114226467|gb|ABI56266.1| shikimate kinase [Alkalilimnicola ehrlichii MLHE-1]
Length = 173
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
S+ L+GM A K+ +G+ LA L+ + D+D+ V EA G+S E +G++ AE
Sbjct: 9 SLILIGMPAAGKSTVGRRLAARLQRPFIDTDA-VMEARCGQSLQALMAERGVEGFRAAEA 67
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVPPGMVA 200
VL L V+ G V ++ +A LR G +++D P ++A
Sbjct: 68 RVLCDLQPAEPAVIATGGSVVYAARGMAALRRLGTVVFLDCPVAVLA 114
>gi|188587814|ref|YP_001922265.1| shikimate kinase [Clostridium botulinum E3 str. Alaska E43]
gi|226729121|sp|B2UYK3.1|AROK_CLOBA RecName: Full=Shikimate kinase; Short=SK
gi|188498095|gb|ACD51231.1| shikimate kinase [Clostridium botulinum E3 str. Alaska E43]
Length = 165
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 69/140 (49%), Gaps = 5/140 (3%)
Query: 94 TSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAE 153
VFL+GM K+ +G+ ++ L + D D + E ++ ++ F E E ++ E
Sbjct: 3 NKVFLIGMPGCGKSTIGELISKELLLKFIDMD-IYIEEKTSKTISELF-EQGEDYFRDIE 60
Query: 154 TEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVP-PGMVARMDHSGFP-ES 210
+E K++ +V+ G G V+ N+ L+ +G+ ++ID P +++ +D S P
Sbjct: 61 SEACKEIIKYDNVVIATGGGVVKKGINVETLKNNGLVIFIDRPVEKIISDIDVSRRPLLK 120
Query: 211 EVLPQLFALYKEMRDGYATA 230
++ LYKE D Y A
Sbjct: 121 NGKERIIGLYKERYDIYNKA 140
>gi|420655477|ref|ZP_15142395.1| shikimate kinase 2, partial [Yersinia pestis PY-34]
gi|391520573|gb|EIR73117.1| shikimate kinase 2, partial [Yersinia pestis PY-34]
Length = 115
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 3/108 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++F+VG A KT +GK LA AL Y + D+D L + + A+ G++ E+
Sbjct: 4 TIFMVGARGAGKTTIGKALAQALGYRFVDTD-LFMQQTSQMTVAEVVESEGWDGFRLRES 62
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMVAR 201
L+ +++ + VV G GAV SS N A +R HG +++ ++A+
Sbjct: 63 MALQAVTA-PKTVVATGGGAVLSSENRAFMRDHGRVIYLRASAAVLAK 109
>gi|418609435|ref|ZP_13172587.1| shikimate kinase [Staphylococcus epidermidis VCU065]
gi|418621411|ref|ZP_13184187.1| shikimate kinase [Staphylococcus epidermidis VCU123]
gi|420163090|ref|ZP_14669837.1| putative shikimate kinase [Staphylococcus epidermidis NIHLM095]
gi|420167936|ref|ZP_14674588.1| putative shikimate kinase [Staphylococcus epidermidis NIHLM087]
gi|420170248|ref|ZP_14676809.1| putative shikimate kinase [Staphylococcus epidermidis NIHLM070]
gi|420172592|ref|ZP_14679091.1| putative shikimate kinase [Staphylococcus epidermidis NIHLM067]
gi|420187257|ref|ZP_14693278.1| putative shikimate kinase [Staphylococcus epidermidis NIHLM039]
gi|420197418|ref|ZP_14703142.1| putative shikimate kinase [Staphylococcus epidermidis NIHLM020]
gi|420201669|ref|ZP_14707279.1| putative shikimate kinase [Staphylococcus epidermidis NIHLM018]
gi|420209045|ref|ZP_14714483.1| putative shikimate kinase [Staphylococcus epidermidis NIHLM003]
gi|420211202|ref|ZP_14716576.1| putative shikimate kinase [Staphylococcus epidermidis NIHLM001]
gi|420227326|ref|ZP_14732097.1| shikimate kinase [Staphylococcus epidermidis NIH05003]
gi|374407649|gb|EHQ78501.1| shikimate kinase [Staphylococcus epidermidis VCU065]
gi|374829355|gb|EHR93159.1| shikimate kinase [Staphylococcus epidermidis VCU123]
gi|394234779|gb|EJD80353.1| putative shikimate kinase [Staphylococcus epidermidis NIHLM095]
gi|394237964|gb|EJD83450.1| putative shikimate kinase [Staphylococcus epidermidis NIHLM087]
gi|394240586|gb|EJD86009.1| putative shikimate kinase [Staphylococcus epidermidis NIHLM070]
gi|394241753|gb|EJD87162.1| putative shikimate kinase [Staphylococcus epidermidis NIHLM067]
gi|394256236|gb|EJE01169.1| putative shikimate kinase [Staphylococcus epidermidis NIHLM039]
gi|394266225|gb|EJE10871.1| putative shikimate kinase [Staphylococcus epidermidis NIHLM020]
gi|394271937|gb|EJE16416.1| putative shikimate kinase [Staphylococcus epidermidis NIHLM018]
gi|394279273|gb|EJE23581.1| putative shikimate kinase [Staphylococcus epidermidis NIHLM003]
gi|394281655|gb|EJE25881.1| putative shikimate kinase [Staphylococcus epidermidis NIHLM001]
gi|394297257|gb|EJE40860.1| shikimate kinase [Staphylococcus epidermidis NIH05003]
Length = 170
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 9/131 (6%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+ LVG KT +GK+L+D Y D D+ + E +S F + EKG++ ET
Sbjct: 8 IILVGFMGTGKTTVGKYLSDLYNLSYVDLDNFI-EVNECKSIPDIFNDIGEKGFRSLETR 66
Query: 156 VLKQLSSMGRL-VVCAGNGAVQSSANLALLRHGIS-LWIDVPPGMVARM----DHSGFPE 209
LK S + ++ G G ++ + +L LL++ +W+D ++ + H +
Sbjct: 67 YLK--SCLNTFDIISTGGGIIEDTNSLKLLKNQKHVVWLDCDIEIIFKRVKNDSHRPNAK 124
Query: 210 SEVLPQLFALY 220
S+ L QL ALY
Sbjct: 125 SKNLNQLDALY 135
>gi|343498987|ref|ZP_08736992.1| shikimate kinase I [Vibrio tubiashii ATCC 19109]
gi|418477043|ref|ZP_13046182.1| shikimate kinase I [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
gi|342823626|gb|EGU58238.1| shikimate kinase I [Vibrio tubiashii ATCC 19109]
gi|384575360|gb|EIF05808.1| shikimate kinase I [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
Length = 172
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L + DSD+++ E G + A F E+G++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRHLAQQLHMEFVDSDTVIEERTGAD-IAWVFDVEGEEGFRDREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
+V+ L+ +V+ G G+++S N L GI ++++
Sbjct: 65 KVINDLTEEQGIVLATGGGSIKSKENRNRLSARGIVVYLE 104
>gi|424978360|ref|ZP_18391292.1| shikimate kinase [Enterococcus faecium P1123]
gi|402962122|gb|EJX79092.1| shikimate kinase [Enterococcus faecium P1123]
Length = 169
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 71/142 (50%), Gaps = 16/142 (11%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
S+ L+G A KT +GK LA L+ Y D D+ + E S A+ F EK +++ E+
Sbjct: 3 SILLIGFMGAGKTTIGKGLAQCLQKEYVDLDTKIEEHIQL-SIAEYFHYYGEKSFRKVES 61
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPP-GMVARMDHS------- 205
++L++LS+ + ++ G G VQS+ N L+ I L+++ +V R+
Sbjct: 62 DILRKLSNEDK-IIATGGGIVQSAENRRFLKTQPIVLYLEAEADCLVDRIQQDETSIRPL 120
Query: 206 --GFPESEV---LPQLFALYKE 222
G E+ L Q +LY+E
Sbjct: 121 ALGKTREEIKALLAQRLSLYEE 142
>gi|387130722|ref|YP_006293612.1| shikimate kinase [Methylophaga sp. JAM7]
gi|386272011|gb|AFJ02925.1| Shikimate kinase I [Methylophaga sp. JAM7]
Length = 177
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA LR + DSD + E G S + F E G+++ E
Sbjct: 5 NLFLVGPMGAGKSTIGRHLAKRLRRTFLDSDREI-EQRTGVSISWIFEMEGEAGFREREQ 63
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSAN 180
++++ L+ M +V+ G GAV + N
Sbjct: 64 KMIEALTEMDNIVLATGGGAVLAEMN 89
>gi|113869382|ref|YP_727871.1| shikimate kinase [Ralstonia eutropha H16]
gi|113528158|emb|CAJ94503.1| shikimate kinase [Ralstonia eutropha H16]
Length = 226
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++F VG+ A KT +G+ +A L Y +FDSD EA G F E G++ E
Sbjct: 34 NLFFVGLMGAGKTTVGRTVARRLHYPFFDSDH-ELEAHCGVRIPVIFEVEGEAGFRDREA 92
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR 185
++++L++ +V+ G GAV + N +L+
Sbjct: 93 AMIRELAARQGIVLATGGGAVLRAENREVLK 123
>gi|406936069|gb|EKD69881.1| shikimate kinase I, partial [uncultured bacterium]
Length = 147
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Query: 94 TSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAE 153
++FLVG A KT +G++LA L ++DSD + E G S + F G++Q E
Sbjct: 6 NNIFLVGPMGAGKTSVGRYLAKKLNKDFYDSDEEI-ENRMGVSLSWIFDLEGMAGFRQRE 64
Query: 154 TEVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDV 194
+V+ +LS + +V+ G G V++ LR G ++++V
Sbjct: 65 MKVIDELSQLHNIVLSTGGGCVETPEVREFLRQRGTVVYMEV 106
>gi|441499919|ref|ZP_20982091.1| Shikimate kinase I [Fulvivirga imtechensis AK7]
gi|441436379|gb|ELR69751.1| Shikimate kinase I [Fulvivirga imtechensis AK7]
Length = 176
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 76/155 (49%), Gaps = 17/155 (10%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
L ++FL+GM + K+ +G+ LA+ + + D D + A G S + F DE ++
Sbjct: 3 LLNKNIFLIGMPGSGKSTVGRQLAEKFQMPFVDLDYEIMSNA-GMSIKEIFAAYDEDHFR 61
Query: 151 QAETEVLKQ-LSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMVARMDHSGFP 208
Q E E L+ + V+ G G N+ L+R +GIS++IDVP
Sbjct: 62 QLEREALRAVIQKSAGAVIATGGGTPCFFDNMELIRKNGISIFIDVPV------------ 109
Query: 209 ESEVLPQLFALYKEMRDGYA-TADVTVSLQKVASQ 242
+E++ ++ A ++ R ++ D+ V+L ++ Q
Sbjct: 110 -TELISRINAAERDKRPKFSNNTDLAVTLNQLVRQ 143
>gi|340028601|ref|ZP_08664664.1| shikimate kinase [Paracoccus sp. TRP]
Length = 178
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 11/152 (7%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L+GM A KT +G LA L + D+D+ + E A S + F E+ ++ E+
Sbjct: 4 NIVLIGMMGAGKTAIGGELARRLNRPFHDTDAEI-ERAAAMSIPEIFARDGEEFFRARES 62
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALL-RHGISLWIDVP-PGMVARMDHSGFPESEV 212
EVL+++ S G +V G GA N + + G+++W+D + R+ H P +
Sbjct: 63 EVLRRVLSSGPGIVSTGGGAWLRPENRGRIAQDGVAVWLDCDLETLWHRVRHR--PTRPL 120
Query: 213 L----PQ--LFALYKEMRDGYATADVTVSLQK 238
L P+ L L E YA AD+ V Q+
Sbjct: 121 LQTADPRGTLERLLTERSPVYALADIRVPAQR 152
>gi|333396238|ref|ZP_08478055.1| Shikimate kinase [Lactobacillus coryniformis subsp. coryniformis
KCTC 3167]
gi|420144852|ref|ZP_14652332.1| Shikimate kinase (SK) [Lactobacillus coryniformis subsp.
coryniformis CECT 5711]
gi|398403544|gb|EJN56781.1| Shikimate kinase (SK) [Lactobacillus coryniformis subsp.
coryniformis CECT 5711]
Length = 174
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
V LVG KT +G+ LA R D D+ + AA G+S + F +S E ++Q ET+
Sbjct: 4 VILVGFMGTGKTTVGEVLAANFRRPQIDLDAEIV-AAAGKSIKQIFADSGEAAFRQLETQ 62
Query: 156 VLKQ-LSSMGRLVVCAGNGAVQSSANLALLRH 186
VL+Q + G ++ G G V+S+AN LL+
Sbjct: 63 VLQQAFAKSG--ILSTGGGVVESAANRKLLQQ 92
>gi|20807724|ref|NP_622895.1| shikimate kinase [Thermoanaerobacter tengcongensis MB4]
gi|81481662|sp|Q8RAE8.1|AROK_THETN RecName: Full=Shikimate kinase; Short=SK
gi|20516276|gb|AAM24499.1| Shikimate kinase [Thermoanaerobacter tengcongensis MB4]
Length = 171
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 56/108 (51%), Gaps = 2/108 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L G KT +GK +A L + + D+D LV E G S A+ F + E+ +++ E
Sbjct: 3 NIVLTGFMGTGKTTVGKKVATTLHFNFIDTDKLV-EKMAGMSVAEIFEKHGEEYFRKLEK 61
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMVAR 201
+ + S + V+ G G V + +N+ LR +G+ + + P ++ R
Sbjct: 62 AAVIKASRLKNHVIATGGGVVLNPSNIVQLRKNGVIILLKARPEVILR 109
>gi|424669789|ref|ZP_18106814.1| shikimate kinase [Stenotrophomonas maltophilia Ab55555]
gi|401071860|gb|EJP80371.1| shikimate kinase [Stenotrophomonas maltophilia Ab55555]
Length = 186
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 82/177 (46%), Gaps = 27/177 (15%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L+G A KT +G+ LA+ + D D + +AAG S F S E G++ E
Sbjct: 12 NLILIGPMGAGKTCIGRRLAERFTLDFVDVDQAIVDAAGA-SIPTIFEHSGEAGFRSHER 70
Query: 155 EVL-KQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVPPGMVARMDH----SGFP 208
E L + L G+L V G GAV N AL+ H G +++ V + A+++ G P
Sbjct: 71 EALARVLEGRGQL-VSTGGGAVLDPGNRALIAHRGFVVYLRV--SVTAQLERLARDKGRP 127
Query: 209 ------ESEVLPQLFA----LYKEM------RDGYATADVTVSL-QKVASQLGYDDL 248
+VL L A LY+E+ D Y AD T L K+A+Q DL
Sbjct: 128 LLQRPDREQVLHDLAAHRDPLYRELADITLDTDPYTAADATAHLVVKLATQWQRQDL 184
>gi|315646136|ref|ZP_07899256.1| Shikimate kinase [Paenibacillus vortex V453]
gi|315278335|gb|EFU41651.1| Shikimate kinase [Paenibacillus vortex V453]
Length = 170
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Query: 93 GTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQA 152
G ++ L+GM K+ +G+ +AD+L Y D D+ + E G + + F E +++A
Sbjct: 5 GKNIILIGMMGTGKSTVGRLVADSLGYTLIDLDTEI-EKLDGRTIPEMFEADGESYFREA 63
Query: 153 ETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHG 187
E+ L+ + +VV +G GAV SS N ++ G
Sbjct: 64 ESAALRSVLLRKGIVVASGGGAVLSSENCEAMKQG 98
>gi|238787955|ref|ZP_04631751.1| Shikimate kinase 2 [Yersinia frederiksenii ATCC 33641]
gi|238723903|gb|EEQ15547.1| Shikimate kinase 2 [Yersinia frederiksenii ATCC 33641]
Length = 174
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 78/160 (48%), Gaps = 14/160 (8%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++F+VG A KT +GK LA AL Y + D+D + + A RE + G++ E+
Sbjct: 4 TIFMVGARGAGKTTIGKALAQALGYRFIDTDLFMQQTLQASVAELVAREGWD-GFRMRES 62
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMVA-RMDHSGFPESEV 212
L+ +++ + VV G GAV S N +R HG+ +++ ++A R+ PE
Sbjct: 63 MALQTVTA-AKTVVATGGGAVLSQENRTFMRNHGLVIYLRASANVLAGRLAED--PEDAQ 119
Query: 213 LPQLFA--LYKEMRDGYATADVTVSLQKVASQLGYDDLDA 250
P L + +EM DV S + + ++ + LDA
Sbjct: 120 RPSLTGKPIVEEM------LDVLASREALYQEVAHHVLDA 153
>gi|323498121|ref|ZP_08103125.1| shikimate kinase I [Vibrio sinaloensis DSM 21326]
gi|323316832|gb|EGA69839.1| shikimate kinase I [Vibrio sinaloensis DSM 21326]
Length = 172
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L + DSD+++ E G + A F E+G++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRHLASQLHMEFVDSDTVIEERTGAD-IAWVFDVEGEEGFRDREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
+V+ L+ +V+ G G+++S N L GI ++++
Sbjct: 65 KVINDLTEEQGIVLATGGGSIKSKENRNRLSARGIVVYLE 104
>gi|254508154|ref|ZP_05120279.1| shikimate kinase [Vibrio parahaemolyticus 16]
gi|219548876|gb|EED25876.1| shikimate kinase [Vibrio parahaemolyticus 16]
Length = 172
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L + DSD+++ E G + A F E+G++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRHLAQQLHMEFVDSDTVIEERTGAD-IAWVFDVEGEEGFRDREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
+V+ L+ +V+ G G+++S N L GI ++++
Sbjct: 65 KVINDLTEEQGIVLATGGGSIKSKENRNRLSARGIVVYLE 104
>gi|91776806|ref|YP_546562.1| shikimate kinase [Methylobacillus flagellatus KT]
gi|91710793|gb|ABE50721.1| shikimate kinase [Methylobacillus flagellatus KT]
Length = 170
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++F VG+ A KT +G+ +A L ++DSD + E G S F E G+++ E
Sbjct: 4 NIFFVGLMGAGKTTIGRIIAKHLNKAFYDSDHEI-ERRTGVSIPVIFELEKEDGFRKREA 62
Query: 155 EVLKQLSSMGRLVVCAGNGAV 175
V+++LS M +V+ G GAV
Sbjct: 63 AVIEELSHMQDIVLATGGGAV 83
>gi|15642624|ref|NP_232257.1| shikimate kinase I [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121727589|ref|ZP_01680697.1| shikimate kinase [Vibrio cholerae V52]
gi|147675064|ref|YP_001218122.1| shikimate kinase I [Vibrio cholerae O395]
gi|153819047|ref|ZP_01971714.1| shikimate kinase [Vibrio cholerae NCTC 8457]
gi|153821542|ref|ZP_01974209.1| shikimate kinase [Vibrio cholerae B33]
gi|153825153|ref|ZP_01977820.1| shikimate kinase [Vibrio cholerae MZO-2]
gi|153830203|ref|ZP_01982870.1| shikimate kinase [Vibrio cholerae 623-39]
gi|227082745|ref|YP_002811296.1| shikimate kinase I [Vibrio cholerae M66-2]
gi|227119067|ref|YP_002820963.1| shikimate kinase [Vibrio cholerae O395]
gi|229507319|ref|ZP_04396824.1| shikimate kinase I [Vibrio cholerae BX 330286]
gi|229509757|ref|ZP_04399238.1| shikimate kinase I [Vibrio cholerae B33]
gi|229513552|ref|ZP_04403016.1| shikimate kinase I [Vibrio cholerae TMA 21]
gi|229516882|ref|ZP_04406328.1| shikimate kinase I [Vibrio cholerae RC9]
gi|229521695|ref|ZP_04411113.1| shikimate kinase I [Vibrio cholerae TM 11079-80]
gi|229524609|ref|ZP_04414014.1| shikimate kinase I [Vibrio cholerae bv. albensis VL426]
gi|229527443|ref|ZP_04416835.1| shikimate kinase I [Vibrio cholerae 12129(1)]
gi|229606825|ref|YP_002877473.1| shikimate kinase I [Vibrio cholerae MJ-1236]
gi|254285823|ref|ZP_04960785.1| shikimate kinase [Vibrio cholerae AM-19226]
gi|254851168|ref|ZP_05240518.1| shikimate kinase I [Vibrio cholerae MO10]
gi|255744404|ref|ZP_05418356.1| shikimate kinase I [Vibrio cholera CIRS 101]
gi|262158484|ref|ZP_06029599.1| shikimate kinase I [Vibrio cholerae INDRE 91/1]
gi|262170122|ref|ZP_06037811.1| shikimate kinase I [Vibrio cholerae RC27]
gi|262189811|ref|ZP_06048152.1| shikimate kinase I [Vibrio cholerae CT 5369-93]
gi|297581469|ref|ZP_06943392.1| shikimate kinase I [Vibrio cholerae RC385]
gi|298500548|ref|ZP_07010352.1| shikimate kinase [Vibrio cholerae MAK 757]
gi|360036499|ref|YP_004938262.1| shikimate kinase I [Vibrio cholerae O1 str. 2010EL-1786]
gi|379742407|ref|YP_005334376.1| shikimate kinase I [Vibrio cholerae IEC224]
gi|384425556|ref|YP_005634914.1| shikimate kinase [Vibrio cholerae LMA3984-4]
gi|417814639|ref|ZP_12461291.1| shikimate kinase 1 [Vibrio cholerae HC-49A2]
gi|417818376|ref|ZP_12465003.1| shikimate kinase 1 [Vibrio cholerae HCUF01]
gi|417821933|ref|ZP_12468546.1| shikimate kinase 1 [Vibrio cholerae HE39]
gi|417825843|ref|ZP_12472430.1| shikimate kinase 1 [Vibrio cholerae HE48]
gi|418335617|ref|ZP_12944525.1| shikimate kinase 1 [Vibrio cholerae HC-06A1]
gi|418339032|ref|ZP_12947925.1| shikimate kinase 1 [Vibrio cholerae HC-23A1]
gi|418347154|ref|ZP_12951906.1| shikimate kinase 1 [Vibrio cholerae HC-28A1]
gi|418350911|ref|ZP_12955641.1| shikimate kinase 1 [Vibrio cholerae HC-43A1]
gi|418356383|ref|ZP_12959101.1| shikimate kinase 1 [Vibrio cholerae HC-61A1]
gi|419827562|ref|ZP_14351060.1| shikimate kinase family protein [Vibrio cholerae CP1033(6)]
gi|419834740|ref|ZP_14358193.1| shikimate kinase family protein [Vibrio cholerae HC-61A2]
gi|419838312|ref|ZP_14361749.1| shikimate kinase 1 [Vibrio cholerae HC-46B1]
gi|421318566|ref|ZP_15769133.1| shikimate kinase 1 [Vibrio cholerae CP1032(5)]
gi|421322369|ref|ZP_15772920.1| shikimate kinase 1 [Vibrio cholerae CP1038(11)]
gi|421326165|ref|ZP_15776688.1| shikimate kinase 1 [Vibrio cholerae CP1041(14)]
gi|421329825|ref|ZP_15780334.1| shikimate kinase 1 [Vibrio cholerae CP1042(15)]
gi|421333781|ref|ZP_15784257.1| shikimate kinase 1 [Vibrio cholerae CP1046(19)]
gi|421337323|ref|ZP_15787783.1| shikimate kinase 1 [Vibrio cholerae CP1048(21)]
gi|421340747|ref|ZP_15791178.1| shikimate kinase 1 [Vibrio cholerae HC-20A2]
gi|421344819|ref|ZP_15795221.1| shikimate kinase 1 [Vibrio cholerae HC-43B1]
gi|421348683|ref|ZP_15799059.1| shikimate kinase 1 [Vibrio cholerae HC-46A1]
gi|421352325|ref|ZP_15802689.1| shikimate kinase 1 [Vibrio cholerae HE-25]
gi|421356228|ref|ZP_15806558.1| shikimate kinase 1 [Vibrio cholerae HE-45]
gi|422308559|ref|ZP_16395707.1| shikimate kinase family protein [Vibrio cholerae CP1035(8)]
gi|422897712|ref|ZP_16935148.1| shikimate kinase 1 [Vibrio cholerae HC-40A1]
gi|422903915|ref|ZP_16938874.1| shikimate kinase 1 [Vibrio cholerae HC-48A1]
gi|422907793|ref|ZP_16942585.1| shikimate kinase 1 [Vibrio cholerae HC-70A1]
gi|422914633|ref|ZP_16949136.1| shikimate kinase 1 [Vibrio cholerae HFU-02]
gi|422918457|ref|ZP_16952768.1| shikimate kinase 1 [Vibrio cholerae HC-02A1]
gi|422923917|ref|ZP_16957053.1| shikimate kinase 1 [Vibrio cholerae BJG-01]
gi|422926838|ref|ZP_16959848.1| shikimate kinase 1 [Vibrio cholerae HC-38A1]
gi|423146159|ref|ZP_17133751.1| shikimate kinase 1 [Vibrio cholerae HC-19A1]
gi|423150862|ref|ZP_17138148.1| shikimate kinase 1 [Vibrio cholerae HC-21A1]
gi|423154671|ref|ZP_17141834.1| shikimate kinase 1 [Vibrio cholerae HC-22A1]
gi|423157738|ref|ZP_17144829.1| shikimate kinase 1 [Vibrio cholerae HC-32A1]
gi|423161309|ref|ZP_17148246.1| shikimate kinase 1 [Vibrio cholerae HC-33A2]
gi|423166143|ref|ZP_17152857.1| shikimate kinase 1 [Vibrio cholerae HC-48B2]
gi|423732170|ref|ZP_17705470.1| shikimate kinase family protein [Vibrio cholerae HC-17A1]
gi|423736272|ref|ZP_17709461.1| shikimate kinase family protein [Vibrio cholerae HC-41B1]
gi|423773391|ref|ZP_17713734.1| shikimate kinase family protein [Vibrio cholerae HC-50A2]
gi|423823352|ref|ZP_17717358.1| shikimate kinase family protein [Vibrio cholerae HC-55C2]
gi|423857314|ref|ZP_17721161.1| shikimate kinase family protein [Vibrio cholerae HC-59A1]
gi|423885151|ref|ZP_17724753.1| shikimate kinase family protein [Vibrio cholerae HC-60A1]
gi|423897218|ref|ZP_17727777.1| shikimate kinase family protein [Vibrio cholerae HC-62A1]
gi|423932436|ref|ZP_17732171.1| shikimate kinase family protein [Vibrio cholerae HC-77A1]
gi|423959771|ref|ZP_17735651.1| shikimate kinase family protein [Vibrio cholerae HE-40]
gi|423985896|ref|ZP_17739207.1| shikimate kinase family protein [Vibrio cholerae HE-46]
gi|423998874|ref|ZP_17742122.1| shikimate kinase 1 [Vibrio cholerae HC-02C1]
gi|424003585|ref|ZP_17746658.1| shikimate kinase 1 [Vibrio cholerae HC-17A2]
gi|424007379|ref|ZP_17750347.1| shikimate kinase 1 [Vibrio cholerae HC-37A1]
gi|424010607|ref|ZP_17753539.1| shikimate kinase 1 [Vibrio cholerae HC-44C1]
gi|424017778|ref|ZP_17757602.1| shikimate kinase 1 [Vibrio cholerae HC-55B2]
gi|424020864|ref|ZP_17760642.1| shikimate kinase 1 [Vibrio cholerae HC-59B1]
gi|424025359|ref|ZP_17765007.1| shikimate kinase 1 [Vibrio cholerae HC-62B1]
gi|424028245|ref|ZP_17767845.1| shikimate kinase 1 [Vibrio cholerae HC-69A1]
gi|424587525|ref|ZP_18027102.1| shikimate kinase 1 [Vibrio cholerae CP1030(3)]
gi|424592321|ref|ZP_18031743.1| shikimate kinase 1 [Vibrio cholerae CP1037(10)]
gi|424596180|ref|ZP_18035497.1| shikimate kinase 1 [Vibrio cholerae CP1040(13)]
gi|424600089|ref|ZP_18039266.1| shikimate kinase 1 [Vibrio Cholerae CP1044(17)]
gi|424602850|ref|ZP_18041988.1| shikimate kinase 1 [Vibrio cholerae CP1047(20)]
gi|424607786|ref|ZP_18046725.1| shikimate kinase 1 [Vibrio cholerae CP1050(23)]
gi|424611601|ref|ZP_18050438.1| shikimate kinase 1 [Vibrio cholerae HC-39A1]
gi|424614429|ref|ZP_18053212.1| shikimate kinase 1 [Vibrio cholerae HC-41A1]
gi|424618397|ref|ZP_18057066.1| shikimate kinase 1 [Vibrio cholerae HC-42A1]
gi|424623182|ref|ZP_18061684.1| shikimate kinase 1 [Vibrio cholerae HC-47A1]
gi|424626077|ref|ZP_18064534.1| shikimate kinase 1 [Vibrio cholerae HC-50A1]
gi|424630559|ref|ZP_18068839.1| shikimate kinase 1 [Vibrio cholerae HC-51A1]
gi|424634606|ref|ZP_18072702.1| shikimate kinase 1 [Vibrio cholerae HC-52A1]
gi|424637686|ref|ZP_18075690.1| shikimate kinase 1 [Vibrio cholerae HC-55A1]
gi|424641588|ref|ZP_18079466.1| shikimate kinase 1 [Vibrio cholerae HC-56A1]
gi|424646143|ref|ZP_18083876.1| shikimate kinase 1 [Vibrio cholerae HC-56A2]
gi|424649661|ref|ZP_18087319.1| shikimate kinase 1 [Vibrio cholerae HC-57A1]
gi|424653910|ref|ZP_18091288.1| shikimate kinase 1 [Vibrio cholerae HC-57A2]
gi|424657728|ref|ZP_18095011.1| shikimate kinase 1 [Vibrio cholerae HC-81A2]
gi|429886010|ref|ZP_19367577.1| Shikimate kinase I [Vibrio cholerae PS15]
gi|440710845|ref|ZP_20891492.1| shikimate kinase I [Vibrio cholerae 4260B]
gi|443504958|ref|ZP_21071909.1| shikimate kinase 1 [Vibrio cholerae HC-64A1]
gi|443508865|ref|ZP_21075619.1| shikimate kinase 1 [Vibrio cholerae HC-65A1]
gi|443512703|ref|ZP_21079335.1| shikimate kinase 1 [Vibrio cholerae HC-67A1]
gi|443516262|ref|ZP_21082766.1| shikimate kinase 1 [Vibrio cholerae HC-68A1]
gi|443520055|ref|ZP_21086441.1| shikimate kinase 1 [Vibrio cholerae HC-71A1]
gi|443524948|ref|ZP_21091149.1| shikimate kinase 1 [Vibrio cholerae HC-72A2]
gi|443528750|ref|ZP_21094781.1| shikimate kinase 1 [Vibrio cholerae HC-78A1]
gi|443532528|ref|ZP_21098541.1| shikimate kinase 1 [Vibrio cholerae HC-7A1]
gi|443536344|ref|ZP_21102209.1| shikimate kinase 1 [Vibrio cholerae HC-80A1]
gi|443539875|ref|ZP_21105727.1| shikimate kinase 1 [Vibrio cholerae HC-81A1]
gi|449054942|ref|ZP_21733610.1| Shikimate kinase I [Vibrio cholerae O1 str. Inaba G4222]
gi|31076620|sp|Q9KNV1.1|AROK_VIBCH RecName: Full=Shikimate kinase; Short=SK
gi|172047543|sp|A5F523.1|AROK_VIBC3 RecName: Full=Shikimate kinase; Short=SK
gi|9657219|gb|AAF95770.1| shikimate kinase [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121630080|gb|EAX62485.1| shikimate kinase [Vibrio cholerae V52]
gi|126510428|gb|EAZ73022.1| shikimate kinase [Vibrio cholerae NCTC 8457]
gi|126520927|gb|EAZ78150.1| shikimate kinase [Vibrio cholerae B33]
gi|146316947|gb|ABQ21486.1| shikimate kinase [Vibrio cholerae O395]
gi|148874306|gb|EDL72441.1| shikimate kinase [Vibrio cholerae 623-39]
gi|149741299|gb|EDM55341.1| shikimate kinase [Vibrio cholerae MZO-2]
gi|150424005|gb|EDN15944.1| shikimate kinase [Vibrio cholerae AM-19226]
gi|227010633|gb|ACP06845.1| shikimate kinase [Vibrio cholerae M66-2]
gi|227014517|gb|ACP10727.1| shikimate kinase [Vibrio cholerae O395]
gi|229335075|gb|EEO00560.1| shikimate kinase I [Vibrio cholerae 12129(1)]
gi|229338190|gb|EEO03207.1| shikimate kinase I [Vibrio cholerae bv. albensis VL426]
gi|229341289|gb|EEO06293.1| shikimate kinase I [Vibrio cholerae TM 11079-80]
gi|229345945|gb|EEO10917.1| shikimate kinase I [Vibrio cholerae RC9]
gi|229349429|gb|EEO14385.1| shikimate kinase I [Vibrio cholerae TMA 21]
gi|229353231|gb|EEO18170.1| shikimate kinase I [Vibrio cholerae B33]
gi|229354824|gb|EEO19745.1| shikimate kinase I [Vibrio cholerae BX 330286]
gi|229369480|gb|ACQ59903.1| shikimate kinase I [Vibrio cholerae MJ-1236]
gi|254846873|gb|EET25287.1| shikimate kinase I [Vibrio cholerae MO10]
gi|255737929|gb|EET93322.1| shikimate kinase I [Vibrio cholera CIRS 101]
gi|262021530|gb|EEY40242.1| shikimate kinase I [Vibrio cholerae RC27]
gi|262029645|gb|EEY48294.1| shikimate kinase I [Vibrio cholerae INDRE 91/1]
gi|262034307|gb|EEY52706.1| shikimate kinase I [Vibrio cholerae CT 5369-93]
gi|297534307|gb|EFH73145.1| shikimate kinase I [Vibrio cholerae RC385]
gi|297540717|gb|EFH76774.1| shikimate kinase [Vibrio cholerae MAK 757]
gi|327485109|gb|AEA79516.1| Shikimate kinase I [Vibrio cholerae LMA3984-4]
gi|340035197|gb|EGQ96178.1| shikimate kinase 1 [Vibrio cholerae HCUF01]
gi|340035449|gb|EGQ96429.1| shikimate kinase 1 [Vibrio cholerae HC-49A2]
gi|340035969|gb|EGQ96946.1| shikimate kinase 1 [Vibrio cholerae HE39]
gi|340045701|gb|EGR06642.1| shikimate kinase 1 [Vibrio cholerae HE48]
gi|341619250|gb|EGS45104.1| shikimate kinase 1 [Vibrio cholerae HC-48A1]
gi|341619660|gb|EGS45463.1| shikimate kinase 1 [Vibrio cholerae HC-70A1]
gi|341620120|gb|EGS45898.1| shikimate kinase 1 [Vibrio cholerae HC-40A1]
gi|341634854|gb|EGS59586.1| shikimate kinase 1 [Vibrio cholerae HC-02A1]
gi|341635928|gb|EGS60633.1| shikimate kinase 1 [Vibrio cholerae HFU-02]
gi|341642940|gb|EGS67238.1| shikimate kinase 1 [Vibrio cholerae BJG-01]
gi|341645323|gb|EGS69471.1| shikimate kinase 1 [Vibrio cholerae HC-38A1]
gi|356416210|gb|EHH69846.1| shikimate kinase 1 [Vibrio cholerae HC-06A1]
gi|356416796|gb|EHH70420.1| shikimate kinase 1 [Vibrio cholerae HC-21A1]
gi|356421921|gb|EHH75409.1| shikimate kinase 1 [Vibrio cholerae HC-19A1]
gi|356427416|gb|EHH80666.1| shikimate kinase 1 [Vibrio cholerae HC-22A1]
gi|356429075|gb|EHH82294.1| shikimate kinase 1 [Vibrio cholerae HC-28A1]
gi|356429325|gb|EHH82543.1| shikimate kinase 1 [Vibrio cholerae HC-23A1]
gi|356438727|gb|EHH91731.1| shikimate kinase 1 [Vibrio cholerae HC-32A1]
gi|356443387|gb|EHH96209.1| shikimate kinase 1 [Vibrio cholerae HC-33A2]
gi|356443803|gb|EHH96621.1| shikimate kinase 1 [Vibrio cholerae HC-43A1]
gi|356448717|gb|EHI01479.1| shikimate kinase 1 [Vibrio cholerae HC-48B2]
gi|356451597|gb|EHI04280.1| shikimate kinase 1 [Vibrio cholerae HC-61A1]
gi|356647653|gb|AET27708.1| shikimate kinase I [Vibrio cholerae O1 str. 2010EL-1786]
gi|378795917|gb|AFC59388.1| shikimate kinase I [Vibrio cholerae IEC224]
gi|395915479|gb|EJH26313.1| shikimate kinase 1 [Vibrio cholerae CP1032(5)]
gi|395915823|gb|EJH26655.1| shikimate kinase 1 [Vibrio cholerae CP1041(14)]
gi|395916918|gb|EJH27747.1| shikimate kinase 1 [Vibrio cholerae CP1038(11)]
gi|395926806|gb|EJH37575.1| shikimate kinase 1 [Vibrio cholerae CP1042(15)]
gi|395927143|gb|EJH37907.1| shikimate kinase 1 [Vibrio cholerae CP1046(19)]
gi|395930351|gb|EJH41099.1| shikimate kinase 1 [Vibrio cholerae CP1048(21)]
gi|395938734|gb|EJH49421.1| shikimate kinase 1 [Vibrio cholerae HC-20A2]
gi|395938902|gb|EJH49588.1| shikimate kinase 1 [Vibrio cholerae HC-43B1]
gi|395941047|gb|EJH51727.1| shikimate kinase 1 [Vibrio cholerae HC-46A1]
gi|395949342|gb|EJH59968.1| shikimate kinase 1 [Vibrio cholerae HE-45]
gi|395949725|gb|EJH60345.1| shikimate kinase 1 [Vibrio cholerae HE-25]
gi|395957486|gb|EJH68028.1| shikimate kinase 1 [Vibrio cholerae HC-56A2]
gi|395957934|gb|EJH68446.1| shikimate kinase 1 [Vibrio cholerae HC-57A2]
gi|395960495|gb|EJH70863.1| shikimate kinase 1 [Vibrio cholerae HC-42A1]
gi|395969997|gb|EJH79816.1| shikimate kinase 1 [Vibrio cholerae HC-47A1]
gi|395971774|gb|EJH81406.1| shikimate kinase 1 [Vibrio cholerae CP1030(3)]
gi|395973977|gb|EJH83517.1| shikimate kinase 1 [Vibrio cholerae CP1047(20)]
gi|408006038|gb|EKG44218.1| shikimate kinase 1 [Vibrio cholerae HC-39A1]
gi|408010468|gb|EKG48327.1| shikimate kinase 1 [Vibrio cholerae HC-41A1]
gi|408010639|gb|EKG48490.1| shikimate kinase 1 [Vibrio cholerae HC-50A1]
gi|408016721|gb|EKG54250.1| shikimate kinase 1 [Vibrio cholerae HC-52A1]
gi|408021674|gb|EKG58911.1| shikimate kinase 1 [Vibrio cholerae HC-56A1]
gi|408022085|gb|EKG59311.1| shikimate kinase 1 [Vibrio cholerae HC-55A1]
gi|408029568|gb|EKG66281.1| shikimate kinase 1 [Vibrio cholerae CP1037(10)]
gi|408030334|gb|EKG67001.1| shikimate kinase 1 [Vibrio cholerae CP1040(13)]
gi|408030776|gb|EKG67420.1| shikimate kinase 1 [Vibrio cholerae HC-57A1]
gi|408040378|gb|EKG76564.1| shikimate kinase 1 [Vibrio Cholerae CP1044(17)]
gi|408041595|gb|EKG77699.1| shikimate kinase 1 [Vibrio cholerae CP1050(23)]
gi|408051696|gb|EKG86777.1| shikimate kinase 1 [Vibrio cholerae HC-81A2]
gi|408052743|gb|EKG87768.1| shikimate kinase 1 [Vibrio cholerae HC-51A1]
gi|408606982|gb|EKK80395.1| shikimate kinase family protein [Vibrio cholerae CP1033(6)]
gi|408617103|gb|EKK90227.1| shikimate kinase family protein [Vibrio cholerae CP1035(8)]
gi|408622112|gb|EKK95101.1| shikimate kinase family protein [Vibrio cholerae HC-17A1]
gi|408628984|gb|EKL01701.1| shikimate kinase family protein [Vibrio cholerae HC-41B1]
gi|408632559|gb|EKL05007.1| shikimate kinase family protein [Vibrio cholerae HC-50A2]
gi|408633990|gb|EKL06264.1| shikimate kinase family protein [Vibrio cholerae HC-55C2]
gi|408639275|gb|EKL11092.1| shikimate kinase family protein [Vibrio cholerae HC-59A1]
gi|408639540|gb|EKL11349.1| shikimate kinase family protein [Vibrio cholerae HC-60A1]
gi|408648529|gb|EKL19869.1| shikimate kinase family protein [Vibrio cholerae HC-61A2]
gi|408653265|gb|EKL24438.1| shikimate kinase family protein [Vibrio cholerae HC-77A1]
gi|408653871|gb|EKL25020.1| shikimate kinase family protein [Vibrio cholerae HC-62A1]
gi|408655735|gb|EKL26844.1| shikimate kinase family protein [Vibrio cholerae HE-40]
gi|408663228|gb|EKL34111.1| shikimate kinase family protein [Vibrio cholerae HE-46]
gi|408844120|gb|EKL84256.1| shikimate kinase 1 [Vibrio cholerae HC-37A1]
gi|408844689|gb|EKL84813.1| shikimate kinase 1 [Vibrio cholerae HC-17A2]
gi|408851845|gb|EKL91698.1| shikimate kinase 1 [Vibrio cholerae HC-02C1]
gi|408855694|gb|EKL95393.1| shikimate kinase 1 [Vibrio cholerae HC-46B1]
gi|408858142|gb|EKL97820.1| shikimate kinase 1 [Vibrio cholerae HC-55B2]
gi|408863000|gb|EKM02499.1| shikimate kinase 1 [Vibrio cholerae HC-44C1]
gi|408865863|gb|EKM05253.1| shikimate kinase 1 [Vibrio cholerae HC-59B1]
gi|408869473|gb|EKM08772.1| shikimate kinase 1 [Vibrio cholerae HC-62B1]
gi|408878099|gb|EKM17113.1| shikimate kinase 1 [Vibrio cholerae HC-69A1]
gi|429227156|gb|EKY33211.1| Shikimate kinase I [Vibrio cholerae PS15]
gi|439973578|gb|ELP49791.1| shikimate kinase I [Vibrio cholerae 4260B]
gi|443430681|gb|ELS73240.1| shikimate kinase 1 [Vibrio cholerae HC-64A1]
gi|443434514|gb|ELS80667.1| shikimate kinase 1 [Vibrio cholerae HC-65A1]
gi|443438345|gb|ELS88066.1| shikimate kinase 1 [Vibrio cholerae HC-67A1]
gi|443442469|gb|ELS95778.1| shikimate kinase 1 [Vibrio cholerae HC-68A1]
gi|443446299|gb|ELT02965.1| shikimate kinase 1 [Vibrio cholerae HC-71A1]
gi|443448980|gb|ELT09283.1| shikimate kinase 1 [Vibrio cholerae HC-72A2]
gi|443452786|gb|ELT16622.1| shikimate kinase 1 [Vibrio cholerae HC-78A1]
gi|443456702|gb|ELT24100.1| shikimate kinase 1 [Vibrio cholerae HC-7A1]
gi|443460486|gb|ELT31572.1| shikimate kinase 1 [Vibrio cholerae HC-80A1]
gi|443464559|gb|ELT39221.1| shikimate kinase 1 [Vibrio cholerae HC-81A1]
gi|448265560|gb|EMB02794.1| Shikimate kinase I [Vibrio cholerae O1 str. Inaba G4222]
Length = 174
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 27/168 (16%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L + DSD+++ E G + A F E+G+++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRHLAQQLHMEFIDSDTVIEERTGAD-IAWVFDVEGEEGFRKREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVP-PGMVARMD--------H 204
V+ L+ +V+ G G+V S N L GI ++++ +AR +
Sbjct: 65 AVINDLTEQQGIVLATGGGSVISKENRNRLSARGIVVYLETTIEKQLARTNRDKKRPLLQ 124
Query: 205 SGFPESEVLPQLFA----LYKEMRDGYATADVTV-----SLQKVASQL 243
+ P EVL QL LY+E+ AD+TV S + VA+Q+
Sbjct: 125 TDCP-REVLEQLAEDRNPLYEEI------ADITVRTDDQSAKVVANQI 165
>gi|427406973|ref|ZP_18897178.1| hypothetical protein HMPREF9161_01538 [Selenomonas sp. F0473]
gi|425707448|gb|EKU70492.1| hypothetical protein HMPREF9161_01538 [Selenomonas sp. F0473]
Length = 173
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 70/152 (46%), Gaps = 16/152 (10%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+V L+G KT +G+ LA L + D D + E GG S + F E ++ E
Sbjct: 3 NVVLIGFMGTGKTTIGRLLAGRLGCAFHDLDRKI-EETGGMSIPEMFARYGEPYFRAREK 61
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRHG---ISLWIDVPPGMVARMDHSGFPESE 211
E ++ ++ G LVV G G V+ + N+A LR ++L DV ++AR G E
Sbjct: 62 EAVRAAAARGNLVVATGGGVVKDAENIAALRRSGIIVALTADVDT-ILARTARCG--ERP 118
Query: 212 VL---------PQLFALYKEMRDGYATADVTV 234
VL + +L + R Y AD+TV
Sbjct: 119 VLDGADAGDRRAAIESLLADRRHLYEGADITV 150
>gi|392553582|ref|ZP_10300719.1| shikimate kinase I [Pseudoalteromonas spongiae UST010723-006]
Length = 172
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LAD L +FDSD + E G A F E+G+++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRHLADQLHLEFFDSDQEI-ERRTGADIAWVFDIEGEEGFRRREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSS-ANLALLRHGISLWIDVP 195
V+ L+ +V+ G G++ S L GI ++++ P
Sbjct: 65 SVISDLTEKQGIVLATGGGSIISKDVRNKLSARGIVVYLETP 106
>gi|375266819|ref|YP_005024262.1| shikimate kinase I [Vibrio sp. EJY3]
gi|369842139|gb|AEX23283.1| shikimate kinase I [Vibrio sp. EJY3]
Length = 172
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L + DSD+++ E G + + F E+G+++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRHLAQQLHMEFVDSDTVIEERTGAD-ISWVFDVEGEEGFRKREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
VL+ L+ +V+ G G+V+S N L G+ ++++
Sbjct: 65 SVLEDLTQEQGIVLATGGGSVKSKENRNRLSARGVVVYLE 104
>gi|373454927|ref|ZP_09546787.1| hypothetical protein HMPREF9453_00956 [Dialister succinatiphilus
YIT 11850]
gi|371935366|gb|EHO63115.1| hypothetical protein HMPREF9453_00956 [Dialister succinatiphilus
YIT 11850]
Length = 163
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 67/131 (51%), Gaps = 5/131 (3%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L+GM KT G+ LA+ L + D+D+ + E G ++F EK ++ AE
Sbjct: 3 NIVLIGMPGCGKTTFGRALAERLHRPFIDADAYLEEKEG--RTIQSFFAESEKAFRDAEE 60
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID-VPPGMVARMDHSGFPESEV 212
++ LS+ L++ G G V+ +N+ L G+ ++ID +V ++ P +
Sbjct: 61 RTVEDLSARQGLIIATGGGVVKRQSNVVKLHASGLIIFIDRRAEDIVTDVEVEKRPLLKE 120
Query: 213 LP-QLFALYKE 222
P ++F LYKE
Sbjct: 121 GPDKVFTLYKE 131
>gi|355572380|ref|ZP_09043524.1| Shikimate kinase [Methanolinea tarda NOBI-1]
gi|354824754|gb|EHF08996.1| Shikimate kinase [Methanolinea tarda NOBI-1]
Length = 461
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
V L+G KT G LA L ++D+D+L+ E AG + F E+G+++ E E
Sbjct: 3 VVLIGFRGTGKTAAGHLLARLLGVPFYDTDALIEEKAGAH-VHEIFGAVGEEGFRKLERE 61
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLRHG 187
V+ L S G V G GAV S N+ LR G
Sbjct: 62 VIATLPS-GPGVFATGGGAVLSPENVEHLRRG 92
>gi|332185313|ref|ZP_08387062.1| shikimate kinase family protein [Sphingomonas sp. S17]
gi|332015037|gb|EGI57093.1| shikimate kinase family protein [Sphingomonas sp. S17]
Length = 180
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
Query: 93 GTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQA 152
G+ + LVG+ K+ +G+ LA+ LR + D+D + EAA G S + F + E ++
Sbjct: 14 GSPIVLVGLMGVGKSTVGRRLANRLRVPFVDADHAIEEAA-GMSVTEIFEQFGEPYFRDG 72
Query: 153 ETEVLKQLSSMGRLVVCAGNGAVQSSANLAL-LRHGISLWIDVPPGMVA 200
E V+ +L V+ G GA + AL L ++W++ P ++A
Sbjct: 73 ERRVIARLVDGRPKVIATGGGAFINDETRALILEQATAIWLNASPEVLA 121
>gi|338972213|ref|ZP_08627589.1| shikimate kinase I [Bradyrhizobiaceae bacterium SG-6C]
gi|338234605|gb|EGP09719.1| shikimate kinase I [Bradyrhizobiaceae bacterium SG-6C]
Length = 204
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 1/111 (0%)
Query: 83 KAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFR 142
+ ADI L G V LVGM + K+ +G+ L L + D+D + A G + ++ F
Sbjct: 14 READIVAALHGRPVVLVGMMGSGKSTIGRRLGARLHLPFLDADHEIEVAHAGMTVSEIFA 73
Query: 143 ESDEKGYQQAETEVLKQLSSMGRLVVCAGNGA-VQSSANLALLRHGISLWI 192
+ E ++ E V+ +L G V+ G GA ++ + +S+W+
Sbjct: 74 QHGEPYFRDGEARVIARLLEGGSCVIATGGGAFMREETRNRIHDKAVSIWL 124
>gi|405983764|ref|ZP_11042069.1| hypothetical protein HMPREF9451_01181 [Slackia piriformis YIT
12062]
gi|404388579|gb|EJZ83661.1| hypothetical protein HMPREF9451_01181 [Slackia piriformis YIT
12062]
Length = 175
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+VFLVG KT + + LA L D DS + G+ A + F++ EKG ++AE+
Sbjct: 7 NVFLVGFMGVGKTTVARRLARDLGVAAIDVDSF-LQRKCGKDANQLFKQRGEKGLRRAES 65
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRH 186
+ +MG V+ G G V + N LLR+
Sbjct: 66 CAFAECCTMGPAVISCGEGIVVAPKNRGLLRN 97
>gi|420639069|ref|ZP_15127548.1| shikimate kinase 2, partial [Yersinia pestis PY-25]
gi|391508282|gb|EIR62035.1| shikimate kinase 2, partial [Yersinia pestis PY-25]
Length = 114
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 3/108 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++F+VG A KT +GK LA AL Y + D+D L + + A+ G++ E+
Sbjct: 4 TIFMVGARGAGKTTIGKALAQALGYRFVDTD-LFMQQTSQMTVAEVVESEGWDGFRLRES 62
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMVAR 201
L+ +++ + VV G GAV SS N A +R HG +++ ++A+
Sbjct: 63 MALQAVTAP-KTVVATGGGAVLSSENRAFMRDHGRVIYLRASAAVLAK 109
>gi|118602590|ref|YP_903805.1| shikimate kinase [Candidatus Ruthia magnifica str. Cm (Calyptogena
magnifica)]
gi|118567529|gb|ABL02334.1| shikimate kinase [Candidatus Ruthia magnifica str. Cm (Calyptogena
magnifica)]
Length = 173
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 53/95 (55%), Gaps = 5/95 (5%)
Query: 94 TSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFE--AAGGESAAKAFRESDEKGYQQ 151
+++ LVG + KT +G+ LA +L+ +FDSD FE A G + F E+G+++
Sbjct: 6 SNIVLVGPMGSGKTSVGRRLACSLKRDFFDSD---FEIVARTGVAIEHIFDVEGEQGFRK 62
Query: 152 AETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRH 186
ET++L L + +++ G G V + N +L+H
Sbjct: 63 RETQMLADLCEIKNIIIATGGGIVINLKNREMLKH 97
>gi|429463041|ref|YP_007184504.1| shikimate kinase [Candidatus Kinetoplastibacterium crithidii (ex
Angomonas deanei ATCC 30255)]
gi|451811821|ref|YP_007448276.1| shikimate kinase [Candidatus Kinetoplastibacterium crithidii
TCC036E]
gi|429338555|gb|AFZ82978.1| shikimate kinase [Candidatus Kinetoplastibacterium crithidii (ex
Angomonas deanei ATCC 30255)]
gi|451776979|gb|AGF47978.1| shikimate kinase [Candidatus Kinetoplastibacterium crithidii
TCC036E]
Length = 209
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 94 TSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAE 153
T +FLVGM A K+ +G+ LA + + D D + EA+ G F E G+++ E
Sbjct: 38 TPIFLVGMMGAGKSTIGRSLAQYMERKFVDLDCEI-EASCGVKIPVIFEIEGESGFRKRE 96
Query: 154 TEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWI 192
++ L++ S ++V+ G GA+ S N +L+ GI +++
Sbjct: 97 SDFLQKYSLDEKIVLATGGGAILSPHNRQILKSRGIVIYL 136
>gi|393778306|ref|ZP_10366580.1| AroK protein [Ralstonia sp. PBA]
gi|392714577|gb|EIZ02177.1| AroK protein [Ralstonia sp. PBA]
Length = 192
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 2/109 (1%)
Query: 89 TELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKG 148
+ L ++F VG+ A KT +GK +A L +FDSD + EA G F E G
Sbjct: 2 SRLNPNNIFFVGLMGAGKTTVGKSVAKRLGRPFFDSDHEI-EARCGVRIPTIFELEGEDG 60
Query: 149 YQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPP 196
++Q E + +L+ +V+ G GAV N A L G+ +++ P
Sbjct: 61 FRQREALAIDELTRREGIVLATGGGAVLRPENRAHLHERGVVVYLRANP 109
>gi|290968006|ref|ZP_06559555.1| shikimate kinase [Megasphaera genomosp. type_1 str. 28L]
gi|335049387|ref|ZP_08542383.1| shikimate kinase [Megasphaera sp. UPII 199-6]
gi|290781912|gb|EFD94491.1| shikimate kinase [Megasphaera genomosp. type_1 str. 28L]
gi|333763210|gb|EGL40671.1| shikimate kinase [Megasphaera sp. UPII 199-6]
Length = 167
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 68/147 (46%), Gaps = 14/147 (9%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L+GM KT LG+ LAD L + + D+D V E G+S A F + E ++ ET
Sbjct: 5 NIILIGMPGCGKTTLGRKLADRLAWPFRDTDR-VAERLSGQSVAALF-QRGEAYFRDWET 62
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVPPGMVARMDHSGFPESEVL 213
+ V+ G G V N+ H + +WI P ++A +G E+ L
Sbjct: 63 RACRVCGGETHTVIACGGGTVLRPENMQCWSHRSVIIWIRRPLALLA---TAGQVETRPL 119
Query: 214 PQ-----LFALYKEMR---DGYATADV 232
Q +++LY + R + YA A V
Sbjct: 120 LQGNKETVYSLYAQRRGLYEQYAQATV 146
>gi|149278995|ref|ZP_01885129.1| putative shikimate kinase [Pedobacter sp. BAL39]
gi|149230274|gb|EDM35659.1| putative shikimate kinase [Pedobacter sp. BAL39]
Length = 168
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 60/122 (49%), Gaps = 2/122 (1%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+FL+G K+ LGK LA + Y + D D + E G + A F E ++ E++
Sbjct: 3 IFLIGFMGCGKSTLGKKLASRMGYEFIDLDHQI-EKEIGSTIANYFSAHGEAVFRSQESK 61
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALL-RHGISLWIDVPPGMVARMDHSGFPESEVLP 214
LK+ VV G G N+ + +GIS++I++PP ++A+ SG + +L
Sbjct: 62 TLKEFDYPENCVVATGGGTPCFFDNMDWINNNGISIYIELPPVVLAQRLESGKDKRPLLR 121
Query: 215 QL 216
L
Sbjct: 122 DL 123
>gi|338980486|ref|ZP_08631758.1| 3-dehydroquinate synthase [Acidiphilium sp. PM]
gi|338208614|gb|EGO96461.1| 3-dehydroquinate synthase [Acidiphilium sp. PM]
Length = 536
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 15/150 (10%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
S+ L+G+ A K+ +G+ LA L + DSD+ + EAA G++ A F E ++ E
Sbjct: 3 SIVLIGLMGAGKSAVGRRLAAQLALPFHDSDAEI-EAAAGKTVADIFASEGEAAFRARER 61
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLW----IDVPPGMVARMDH----- 204
++ +L + +V+ G GA A++R IS+W +DV V H
Sbjct: 62 AMIAELLAGPPIVLATGGGAFMDPETRAVIRARAISVWLRATLDVLLARVRGRTHRPLLN 121
Query: 205 SGFPESEVLPQLFALYKEMRDGYATADVTV 234
G P +E+L +L AL + YA AD+ V
Sbjct: 122 QGDP-AEILSRLSALRAPV---YAEADIIV 147
>gi|386829469|ref|ZP_10116576.1| shikimate kinase [Beggiatoa alba B18LD]
gi|386430353|gb|EIJ44181.1| shikimate kinase [Beggiatoa alba B18LD]
Length = 179
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 59/108 (54%), Gaps = 3/108 (2%)
Query: 87 ISTELK-GTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESD 145
+S E K ++FLVG+ KT +G+ LA AL + DSD + E G S + F
Sbjct: 1 MSAEFKQHNNIFLVGLMGVGKTTIGRQLATALDVPFKDSDKEIEERTGA-SVSLIFEVEG 59
Query: 146 EKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWI 192
E G+++ ET ++ +L++ +V+ G GA+ S N L+ G+ +++
Sbjct: 60 EAGFRKRETAMIAELTAQKGIVLATGGGAILSEENRKCLQDRGLVVYL 107
>gi|183179751|ref|ZP_02957962.1| shikimate kinase [Vibrio cholerae MZO-3]
gi|183013162|gb|EDT88462.1| shikimate kinase [Vibrio cholerae MZO-3]
Length = 154
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 22/154 (14%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L + DSD+++ E G + A F E+G+++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRHLAQQLHMEFIDSDTVIEERTGAD-IAWVFDVEGEEGFRKREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVP-PGMVARMD--------H 204
V+ L+ +V+ G G+V S N L GI ++++ +AR +
Sbjct: 65 AVINDLTEQQGIVLATGGGSVISKENRNRLSARGIVVYLETTIEKQLARTNRDKKRPLLQ 124
Query: 205 SGFPESEVLPQLFA----LYKEMRDGYATADVTV 234
+ P EVL QL LY+E+ AD+TV
Sbjct: 125 TDCP-REVLEQLAEDRNPLYEEI------ADITV 151
>gi|384086538|ref|ZP_09997713.1| shikimate kinase [Acidithiobacillus thiooxidans ATCC 19377]
Length = 173
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+V L+G + K+ +G+ LA LR Y DSD L+ G + F E G+++ E
Sbjct: 4 TVILIGPMGSGKSTIGRLLAARLRIPYVDSDQLIVTQTGVD-IPTIFEIEGEAGFREREA 62
Query: 155 EVLKQLSSMGR-LVVCAGNGAVQSSANLALLRH-GISLWIDV 194
+V+ L+ + +V+ G GA+ N A LRH G +++DV
Sbjct: 63 KVIADLAEHNQDMVLATGGGAILDPRNRAHLRHKGQVIYLDV 104
>gi|350545437|ref|ZP_08914921.1| Shikimate kinase I [Candidatus Burkholderia kirkii UZHbot1]
gi|350526808|emb|CCD39587.1| Shikimate kinase I [Candidatus Burkholderia kirkii UZHbot1]
Length = 183
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++F VG+ A KT +G+ +A L+ + DSD L EA G + E G++Q E
Sbjct: 9 NIFFVGLMGAGKTTVGRAVARRLQRSFIDSD-LEIEACTGARIPVIWEVEGETGFRQREA 67
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVPP 196
++ +LS +V+ G GAV N L++ GI +++ P
Sbjct: 68 NIIDELSQRSGIVLATGGGAVLRPENREHLKNRGIVIYLRANP 110
>gi|377821847|ref|YP_004978218.1| shikimate kinase [Burkholderia sp. YI23]
gi|357936682|gb|AET90241.1| shikimate kinase [Burkholderia sp. YI23]
Length = 181
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++F VG+ A KT +G+ +A L+ + DSD L EA G + E G++Q E
Sbjct: 9 NIFFVGLMGAGKTTVGRAVARRLQRSFIDSD-LEIEARTGARIPVIWELEGEAGFRQREA 67
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVPP 196
V+ +LS +V+ G GAV N L++ GI +++ P
Sbjct: 68 NVIDELSQRNGIVLATGGGAVLRPENREHLKNRGIVIYLRANP 110
>gi|422911446|ref|ZP_16946068.1| shikimate kinase 1 [Vibrio cholerae HE-09]
gi|424661115|ref|ZP_18098361.1| shikimate kinase 1 [Vibrio cholerae HE-16]
gi|341631416|gb|EGS56310.1| shikimate kinase 1 [Vibrio cholerae HE-09]
gi|408049691|gb|EKG84882.1| shikimate kinase 1 [Vibrio cholerae HE-16]
Length = 174
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 27/168 (16%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L + DSD+++ E G + A F E+G+++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRHLAQQLHMEFIDSDTVIEERTGAD-IAWVFDVEGEEGFRKREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVP-PGMVARMD--------H 204
V+ L+ +V+ G G+V S N L GI ++++ +AR +
Sbjct: 65 AVINDLTEQQGIVLATGGGSVISKENRNRLSARGIVVYLETTIEKQLARTNRDKKRPLLQ 124
Query: 205 SGFPESEVLPQL----FALYKEMRDGYATADVTV-----SLQKVASQL 243
+ P EVL QL LY+E+ AD+TV S + VA+Q+
Sbjct: 125 TDCP-REVLEQLADDRNPLYEEI------ADITVRTDDQSAKVVANQI 165
>gi|429088785|ref|ZP_19151517.1| Shikimate kinase III [Cronobacter universalis NCTC 9529]
gi|426508588|emb|CCK16629.1| Shikimate kinase III [Cronobacter universalis NCTC 9529]
Length = 174
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 71/140 (50%), Gaps = 8/140 (5%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
++LVG KT G+ LA AL Y + D+D + E + A+ + G++ E+E
Sbjct: 5 IYLVGARGCGKTTTGEALARALAYGFADTDRWLLEQTR-MTVAEVVEKEGWPGFRARESE 63
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMVA-RMDHSGFPESEVL 213
L+ +++ VV G G V N +R HG+ ++++VP ++A R++ FPE+
Sbjct: 64 ALQAVTAPA-TVVATGGGMVLRDENREFMRAHGVVIYLNVPVDVLAQRLE--AFPEAGQR 120
Query: 214 PQLFA--LYKEMRDGYATAD 231
P L + +E+ D A D
Sbjct: 121 PTLTGKPMTEEIADVLAVRD 140
>gi|398798235|ref|ZP_10557536.1| shikimate kinase [Pantoea sp. GM01]
gi|398100952|gb|EJL91180.1| shikimate kinase [Pantoea sp. GM01]
Length = 174
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 81/168 (48%), Gaps = 14/168 (8%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
++L+G KT +G+ L+ AL Y + D+D + S A+ + ++ ETE
Sbjct: 5 IYLIGARGCGKTTVGQALSQALGYAFNDTDHH-LQLTTQRSVAEIVASEGWESFRARETE 63
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMVA-RMDHSGFPESEVL 213
L+ +++ V+ G G V + AN +R HG +W++ P ++A R++H PE+
Sbjct: 64 SLRAVTAPN-TVIATGGGMVLAEANCRFMREHGQVIWLNAPSDVLAQRLEHQ--PEAAQR 120
Query: 214 PQLFA--LYKEMRDGYATADVTVSLQKVASQLGYDDLDAVTTEDMTLE 259
P L + +EM D+ + Q + +++A+ + + +E
Sbjct: 121 PTLTGRPIAEEM------GDILRERAHLYRQTAHHEVNAMQSPERVVE 162
>gi|260575106|ref|ZP_05843107.1| Shikimate kinase [Rhodobacter sp. SW2]
gi|259022728|gb|EEW26023.1| Shikimate kinase [Rhodobacter sp. SW2]
Length = 181
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Query: 90 ELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGY 149
E G +V LVGM A K+ +G LA L + DSD + +AA S + F E +
Sbjct: 2 ERLGKTVVLVGMMGAGKSAVGTQLAKLLGVPFRDSDDEIVKAA-QRSIPEIFARDGEPFF 60
Query: 150 QQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALL-RHGISLWI 192
+ ETEVL +L V+ G GA + N AL+ G+S+W+
Sbjct: 61 RARETEVLGRLVRGEPCVLSTGGGAFLAPQNRALIGASGVSVWL 104
>gi|148979184|ref|ZP_01815363.1| shikimate kinase I [Vibrionales bacterium SWAT-3]
gi|417947937|ref|ZP_12591087.1| shikimate kinase I [Vibrio splendidus ATCC 33789]
gi|145961942|gb|EDK27232.1| shikimate kinase I [Vibrionales bacterium SWAT-3]
gi|342810566|gb|EGU45645.1| shikimate kinase I [Vibrio splendidus ATCC 33789]
Length = 172
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L + DSD+++ E G + A F E+G+++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRHLASQLHMEFLDSDTVIEERTGAD-IAWVFDVEGEEGFRKREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
V+ L+ +V+ G G+V S N L GI ++++
Sbjct: 65 SVINDLTEEQGIVLATGGGSVMSKENRNRLSARGIVVYLE 104
>gi|414165021|ref|ZP_11421268.1| shikimate kinase [Afipia felis ATCC 53690]
gi|410882801|gb|EKS30641.1| shikimate kinase [Afipia felis ATCC 53690]
Length = 205
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 58/122 (47%), Gaps = 1/122 (0%)
Query: 81 KKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKA 140
+ + ADI + L ++ LVGM + K+ +G+ LA LR + D+D + GG + +
Sbjct: 12 QNQIADIVSALGARTIVLVGMMGSGKSTVGRRLAARLRLPFVDADHEIETRHGGMTITEI 71
Query: 141 FRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAV-QSSANLALLRHGISLWIDVPPGMV 199
F E +++ E +V+ L G V+ G GAV + + +S+W+ V
Sbjct: 72 FATHGEPYFREGEAKVISALLDGGAQVLATGGGAVLREDTRTRIHDKAVSIWLKADGATV 131
Query: 200 AR 201
R
Sbjct: 132 LR 133
>gi|358639198|dbj|BAL26495.1| shikimate kinase [Azoarcus sp. KH32C]
Length = 180
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 2/101 (1%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
V LVGM A KT +G+ A + D D + EA G F E G+++ E++
Sbjct: 3 VILVGMMGAGKTTVGREYARRHHLRFVDCDHEI-EARTGVKVPTIFEIEGEAGFRRRESQ 61
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALL-RHGISLWIDVP 195
++ +L+ LV+ G GAV + N A++ GI ++++VP
Sbjct: 62 LIDELTQESGLVLATGGGAVLNPDNRAMMSERGIVVYLNVP 102
>gi|159044158|ref|YP_001532952.1| shikimate kinase [Dinoroseobacter shibae DFL 12]
gi|157911918|gb|ABV93351.1| shikimate kinase [Dinoroseobacter shibae DFL 12]
Length = 185
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 2/99 (2%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
V LVGM A KT +G +A L + DSD + +AA + A+ F E ++ ETE
Sbjct: 13 VVLVGMMGAGKTAVGGAVAAQLGVPFIDSDHEIEQAANAK-IAEIFERDGEAFFRDRETE 71
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALL-RHGISLWID 193
VL +L ++ G GA + N AL+ G+S+W+D
Sbjct: 72 VLARLLGGVPAILSTGGGAFLAERNRALIAEKGVSVWLD 110
>gi|430822555|ref|ZP_19441133.1| shikimate kinase [Enterococcus faecium E0120]
gi|430865115|ref|ZP_19480873.1| shikimate kinase [Enterococcus faecium E1574]
gi|431743100|ref|ZP_19531981.1| shikimate kinase [Enterococcus faecium E2071]
gi|431764136|ref|ZP_19552679.1| shikimate kinase [Enterococcus faecium E4215]
gi|430443132|gb|ELA53129.1| shikimate kinase [Enterococcus faecium E0120]
gi|430553193|gb|ELA92894.1| shikimate kinase [Enterococcus faecium E1574]
gi|430607464|gb|ELB44784.1| shikimate kinase [Enterococcus faecium E2071]
gi|430631321|gb|ELB67643.1| shikimate kinase [Enterococcus faecium E4215]
Length = 169
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
S+ L+G A KT +GK LA L+ Y D D+ + E S A+ F EK +++ E+
Sbjct: 3 SILLIGFMGAGKTTIGKGLAQRLQKEYVDLDTKIEEHIQL-SIAEYFHYYGEKSFRKVES 61
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR 185
++L++LS+ + ++ G G VQS+ N L+
Sbjct: 62 DILRKLSNEDK-IIATGGGIVQSAENRRFLK 91
>gi|395493471|ref|ZP_10425050.1| shikimate kinase [Sphingomonas sp. PAMC 26617]
Length = 164
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
Query: 97 FLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEV 156
LVG+ A K+ +G+ LA L + D+DS + E A G S F E ++ E V
Sbjct: 1 MLVGLMGAGKSTVGRRLAIRLGLPFVDADSEI-ETAAGMSIPDIFERFGEAYFRDGERRV 59
Query: 157 LKQLSSMGRLVVCAGNGA-VQSSANLALLRHGISLWIDVPPGMVA 200
+ +L + R V+ G GA V +L G ++W+D P ++A
Sbjct: 60 IARLMNGDRRVIATGGGAFVDDRTRETILAQGFAVWLDAKPSVLA 104
>gi|333896999|ref|YP_004470873.1| shikimate kinase [Thermoanaerobacterium xylanolyticum LX-11]
gi|333112264|gb|AEF17201.1| Shikimate kinase [Thermoanaerobacterium xylanolyticum LX-11]
Length = 171
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 7/137 (5%)
Query: 106 KTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEVLKQLSSMGR 165
KT +GK +AD L + + D+D L+ E G + F + EK ++ E + + S +
Sbjct: 14 KTVVGKRVADILSFGFIDTDDLI-EKISGMKITEIFDKYGEKYFRGIEKIAVARASRLKN 72
Query: 166 LVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMVARMDHSG-----FPESEVLPQLFAL 219
V+ G G V + +N+ LR HG+ + + P ++ R + +V ++ AL
Sbjct: 73 HVISTGGGVVLNPSNIVQLRKHGVVICLKANPEVILRNIGNNDKRPILANGDVYEKIKAL 132
Query: 220 YKEMRDGYATADVTVSL 236
E + Y AD T+ +
Sbjct: 133 LAERQHYYEFADYTIDV 149
>gi|27364776|ref|NP_760304.1| shikimate kinase I [Vibrio vulnificus CMCP6]
gi|37681173|ref|NP_935782.1| shikimate kinase I [Vibrio vulnificus YJ016]
gi|320155170|ref|YP_004187549.1| shikimate kinase I [Vibrio vulnificus MO6-24/O]
gi|31076617|sp|Q8DCM1.1|AROK_VIBVU RecName: Full=Shikimate kinase; Short=SK
gi|39930927|sp|Q7MH83.1|AROK_VIBVY RecName: Full=Shikimate kinase; Short=SK
gi|27360921|gb|AAO09831.1| Shikimate kinase I [Vibrio vulnificus CMCP6]
gi|37199924|dbj|BAC95753.1| shikimate kinase [Vibrio vulnificus YJ016]
gi|319930482|gb|ADV85346.1| shikimate kinase I [Vibrio vulnificus MO6-24/O]
Length = 172
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G++LA L + DSD+++ E G + + F E+G+++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRYLAQQLHMEFLDSDTVIEERTGAD-ISWVFDVEGEEGFRKREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
V+ L+ +V+ G G+V+S N L GI ++++
Sbjct: 65 AVINDLTLEQGIVLATGGGSVKSRENRNRLSARGIVVYLE 104
>gi|406911614|gb|EKD51371.1| shikimate kinase [uncultured bacterium]
Length = 192
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 69/143 (48%), Gaps = 4/143 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++++ G K+ GK LA L ++ D+D V E + F E G++ E
Sbjct: 27 NIYITGFMATGKSVTGKLLARKLNRFFVDTDKEV-ETETNLAIEDIFSSQGESGFRLLER 85
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMV-ARMDHSGF-PESEV 212
E++ ++S LVV G GA+ ++ N A+ + G +++ P + R+ HS P +++
Sbjct: 86 ELIARISQRSNLVVSLGGGAILTAENRAIFKKGQLIFLSTPFQQIWERLQHSQHRPLAKL 145
Query: 213 -LPQLFALYKEMRDGYATADVTV 234
L LY++ Y +D+ +
Sbjct: 146 NFDTLHQLYQDRLPLYNESDIII 168
>gi|293569117|ref|ZP_06680424.1| shikimate kinase [Enterococcus faecium E1071]
gi|294618077|ref|ZP_06697674.1| shikimate kinase [Enterococcus faecium E1679]
gi|406580669|ref|ZP_11055860.1| shikimate kinase [Enterococcus sp. GMD4E]
gi|406582976|ref|ZP_11058071.1| shikimate kinase [Enterococcus sp. GMD3E]
gi|406585320|ref|ZP_11060312.1| shikimate kinase [Enterococcus sp. GMD2E]
gi|406589517|ref|ZP_11063951.1| shikimate kinase [Enterococcus sp. GMD1E]
gi|410937222|ref|ZP_11369083.1| shikimate kinase [Enterococcus sp. GMD5E]
gi|415898709|ref|ZP_11551432.1| shikimate kinase [Enterococcus faecium E4453]
gi|416136812|ref|ZP_11598750.1| shikimate kinase [Enterococcus faecium E4452]
gi|427396201|ref|ZP_18888960.1| hypothetical protein HMPREF9307_01136 [Enterococcus durans
FB129-CNAB-4]
gi|430825514|ref|ZP_19443718.1| shikimate kinase [Enterococcus faecium E0164]
gi|430827644|ref|ZP_19445776.1| shikimate kinase [Enterococcus faecium E0269]
gi|430833066|ref|ZP_19451079.1| shikimate kinase [Enterococcus faecium E0679]
gi|430851690|ref|ZP_19469425.1| shikimate kinase [Enterococcus faecium E1258]
gi|430860225|ref|ZP_19477829.1| shikimate kinase [Enterococcus faecium E1573]
gi|430871300|ref|ZP_19483692.1| shikimate kinase [Enterococcus faecium E1575]
gi|430949124|ref|ZP_19486043.1| shikimate kinase [Enterococcus faecium E1576]
gi|431005444|ref|ZP_19489090.1| shikimate kinase [Enterococcus faecium E1578]
gi|431146166|ref|ZP_19499063.1| shikimate kinase [Enterococcus faecium E1620]
gi|431229804|ref|ZP_19502007.1| shikimate kinase [Enterococcus faecium E1622]
gi|431252358|ref|ZP_19504416.1| shikimate kinase [Enterococcus faecium E1623]
gi|431293418|ref|ZP_19506886.1| shikimate kinase [Enterococcus faecium E1626]
gi|431370158|ref|ZP_19509857.1| shikimate kinase [Enterococcus faecium E1627]
gi|431412474|ref|ZP_19511909.1| shikimate kinase [Enterococcus faecium E1630]
gi|431746202|ref|ZP_19535036.1| shikimate kinase [Enterococcus faecium E2134]
gi|431759362|ref|ZP_19547976.1| shikimate kinase [Enterococcus faecium E3346]
gi|447912550|ref|YP_007393962.1| Shikimate kinase I [Enterococcus faecium NRRL B-2354]
gi|291588164|gb|EFF20005.1| shikimate kinase [Enterococcus faecium E1071]
gi|291595649|gb|EFF26945.1| shikimate kinase [Enterococcus faecium E1679]
gi|364089839|gb|EHM32487.1| shikimate kinase [Enterococcus faecium E4453]
gi|364091637|gb|EHM34081.1| shikimate kinase [Enterococcus faecium E4452]
gi|404453652|gb|EKA00697.1| shikimate kinase [Enterococcus sp. GMD4E]
gi|404457382|gb|EKA03926.1| shikimate kinase [Enterococcus sp. GMD3E]
gi|404462836|gb|EKA08543.1| shikimate kinase [Enterococcus sp. GMD2E]
gi|404470716|gb|EKA15315.1| shikimate kinase [Enterococcus sp. GMD1E]
gi|410734333|gb|EKQ76253.1| shikimate kinase [Enterococcus sp. GMD5E]
gi|425722871|gb|EKU85762.1| hypothetical protein HMPREF9307_01136 [Enterococcus durans
FB129-CNAB-4]
gi|430445979|gb|ELA55678.1| shikimate kinase [Enterococcus faecium E0164]
gi|430484246|gb|ELA61267.1| shikimate kinase [Enterococcus faecium E0269]
gi|430486521|gb|ELA63357.1| shikimate kinase [Enterococcus faecium E0679]
gi|430542272|gb|ELA82380.1| shikimate kinase [Enterococcus faecium E1258]
gi|430552662|gb|ELA92390.1| shikimate kinase [Enterococcus faecium E1573]
gi|430557969|gb|ELA97405.1| shikimate kinase [Enterococcus faecium E1576]
gi|430557998|gb|ELA97432.1| shikimate kinase [Enterococcus faecium E1575]
gi|430561477|gb|ELB00745.1| shikimate kinase [Enterococcus faecium E1578]
gi|430573790|gb|ELB12568.1| shikimate kinase [Enterococcus faecium E1622]
gi|430575706|gb|ELB14403.1| shikimate kinase [Enterococcus faecium E1620]
gi|430578784|gb|ELB17336.1| shikimate kinase [Enterococcus faecium E1623]
gi|430582055|gb|ELB20490.1| shikimate kinase [Enterococcus faecium E1626]
gi|430583905|gb|ELB22263.1| shikimate kinase [Enterococcus faecium E1627]
gi|430589429|gb|ELB27557.1| shikimate kinase [Enterococcus faecium E1630]
gi|430608971|gb|ELB46177.1| shikimate kinase [Enterococcus faecium E2134]
gi|430626162|gb|ELB62748.1| shikimate kinase [Enterococcus faecium E3346]
gi|445188259|gb|AGE29901.1| Shikimate kinase I [Enterococcus faecium NRRL B-2354]
Length = 169
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
S+ L+G A KT +GK LA L+ Y D D+ + E S A+ F EK +++ E+
Sbjct: 3 SILLIGFMGAGKTTIGKGLAQRLQKEYVDLDTKIEEHIQL-SIAEYFHYYGEKSFRKVES 61
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR 185
++L++LS+ + ++ G G VQS+ N L+
Sbjct: 62 DILRKLSNEDK-IIATGGGIVQSAENRRFLK 91
>gi|295690853|ref|YP_003594546.1| shikimate kinase [Caulobacter segnis ATCC 21756]
gi|295432756|gb|ADG11928.1| Shikimate kinase [Caulobacter segnis ATCC 21756]
Length = 201
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 59/112 (52%), Gaps = 2/112 (1%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
L+ ++ LVG+ K+ +G+ LA AL + D+D+ V EAA G S ++ F E E ++
Sbjct: 24 LRQKTIVLVGLMGVGKSSVGRRLATALNLPFRDADNEV-EAAAGRSISEIFAELGEAAFR 82
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVPPGMVAR 201
E V+ +L V+ G GA ++ AL+ +S+W+ ++AR
Sbjct: 83 DGERRVIARLLEEPPHVLATGGGAFVNAETRALINEKALSVWLKADVELLAR 134
>gi|209883235|ref|YP_002287092.1| shikimate kinase [Oligotropha carboxidovorans OM5]
gi|337739671|ref|YP_004631399.1| shikimate kinase AroK [Oligotropha carboxidovorans OM5]
gi|386028689|ref|YP_005949464.1| shikimate kinase AroK [Oligotropha carboxidovorans OM4]
gi|209871431|gb|ACI91227.1| shikimate kinase [Oligotropha carboxidovorans OM5]
gi|336093757|gb|AEI01583.1| shikimate kinase AroK [Oligotropha carboxidovorans OM4]
gi|336097335|gb|AEI05158.1| shikimate kinase AroK [Oligotropha carboxidovorans OM5]
Length = 213
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
Query: 80 VKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAK 139
++ + ADI L ++ LVGM + K+ +G+ LA LR + D+D + GG + +
Sbjct: 19 IQNQTADILAALGTRAIVLVGMMGSGKSTVGRRLAARLRLPFVDADQEIETRHGGMTITE 78
Query: 140 AFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGA-VQSSANLALLRHGISLWI 192
F E +++ E +V+ L G V+ G GA V+ + +S+W+
Sbjct: 79 IFATHGEPYFREGEAKVISALLDGGAQVLATGGGAFVRDDTRERIRSKAVSIWL 132
>gi|424989845|ref|ZP_18402097.1| shikimate kinase [Enterococcus faecium ERV26]
gi|402981036|gb|EJX96592.1| shikimate kinase [Enterococcus faecium ERV26]
Length = 169
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
S+ L+G A KT +GK LA L+ Y D D+ + E S A+ F EK +++ E+
Sbjct: 3 SILLIGFMGAGKTTIGKGLAQCLQKEYVDLDTKIEEHIQL-SIAEYFHYYGEKSFRKVES 61
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR 185
++L+ LS+ + ++ G G VQS+ N L+
Sbjct: 62 DILRNLSNEDK-IIATGGGIVQSAENRRFLK 91
>gi|295103849|emb|CBL01393.1| Shikimate 5-dehydrogenase [Faecalibacterium prausnitzii SL3/3]
Length = 420
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 4/123 (3%)
Query: 74 EDPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAG 133
ED V++ A + E ++ LVGM + K+ LG+ LA L D D + +A
Sbjct: 240 EDAPGEVRRITAALRRET--LNIALVGMPSCGKSTLGRLLAKQLGRPLVDLDEEIVKA-D 296
Query: 134 GESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWI 192
G S F E+G++ E + + LV+ G GAV+ + N+ LR +G+ L+I
Sbjct: 297 GRSIPDIFAAEGEEGFRAKEAAQIARFGKEKGLVLSCGGGAVKRAENVRALRQNGVVLFI 356
Query: 193 DVP 195
D P
Sbjct: 357 DRP 359
>gi|34541244|ref|NP_905723.1| shikimate kinase [Porphyromonas gingivalis W83]
gi|188994384|ref|YP_001928636.1| shikimate kinase [Porphyromonas gingivalis ATCC 33277]
gi|334146512|ref|YP_004509439.1| shikimate kinase [Porphyromonas gingivalis TDC60]
gi|34397560|gb|AAQ66622.1| shikimate kinase [Porphyromonas gingivalis W83]
gi|188594064|dbj|BAG33039.1| probable shikimate kinase [Porphyromonas gingivalis ATCC 33277]
gi|333803666|dbj|BAK24873.1| shikimate kinase [Porphyromonas gingivalis TDC60]
Length = 186
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 59/106 (55%), Gaps = 2/106 (1%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+F+VG + K+ +G+ +AD L + + D+D + E + A FR+ E +++ E
Sbjct: 5 IFIVGYMGSGKSTVGRKMADVLGWRFIDTDFFI-ENRFRKRVADIFRDEGEAVFRRRERV 63
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVPPGMVA 200
V+++LS M ++ G G S N+ L+ G++L+++V ++A
Sbjct: 64 VIEELSGMEDAIIATGGGLPCHSDNMTLMNEAGLTLYLEVSDEVLA 109
>gi|406939030|gb|EKD72132.1| shikimate kinase I [uncultured bacterium]
Length = 174
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 56/104 (53%), Gaps = 2/104 (1%)
Query: 92 KGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQ 151
K ++FL+G A K+ +GK+LA L ++D+D + E G F E G+++
Sbjct: 6 KRKNIFLIGPMGAGKSSVGKYLAAQLDMDFYDTDEEI-EKRTGVDIGWIFDLEGEMGFRK 64
Query: 152 AETEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDV 194
E V+ +L+ + +V+ G G + S +LR HG+ ++++V
Sbjct: 65 REEAVVAELAVLSNIVLATGGGTILSEECRTILRNHGVVVYLEV 108
>gi|229815213|ref|ZP_04445549.1| hypothetical protein COLINT_02259 [Collinsella intestinalis DSM
13280]
gi|229809223|gb|EEP44989.1| hypothetical protein COLINT_02259 [Collinsella intestinalis DSM
13280]
Length = 177
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+F VG A K+ L + L + D+D LV E G++ ++ F E+ ++ ETE
Sbjct: 12 IFFVGFLGAGKSTLARNLGRMFHRRFVDTDRLV-ERKCGQTVSQIFEAEGEQRFRTLETE 70
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVPPG 197
L+ L+S L+V G G V++ N+ L+ G ++++ G
Sbjct: 71 ALESLASERSLLVSCGGGVVETPRNIELIHEMGFCVYLEGDIG 113
>gi|409441768|ref|ZP_11268639.1| Shikimate kinase [Rhizobium mesoamericanum STM3625]
gi|408746760|emb|CCM79875.1| Shikimate kinase [Rhizobium mesoamericanum STM3625]
Length = 191
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
Query: 93 GTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQA 152
G + L+GM + KT +G+ LA L + D+D+ + EAA + + F + E ++
Sbjct: 17 GCCIVLIGMMGSGKTSVGRPLAGRLGLDFIDADAEI-EAAHRMTIPEIFAQHGETYFRDV 75
Query: 153 ETEVLKQLSSMGRLVVCAGNGAVQSSANLA-LLRHGISLWI 192
E +L +L + GR VV G GA ++ A + G+S+W+
Sbjct: 76 ERRMLARLLAEGRKVVATGGGAFMNAETRARIAEKGVSIWL 116
>gi|56476682|ref|YP_158271.1| shikimate kinase [Aromatoleum aromaticum EbN1]
gi|81598874|sp|Q5P5P2.1|AROK_AZOSE RecName: Full=Shikimate kinase; Short=SK
gi|56312725|emb|CAI07370.1| putative shikimate kinase I protein [Aromatoleum aromaticum EbN1]
Length = 175
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 2/101 (1%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
V LVGM A KT +G+ A + + D D + EA G F E G+++ E++
Sbjct: 3 VVLVGMMGAGKTTVGREYAKRHQMRFVDCDHEI-EARTGVKVPTIFEIEGEAGFRRRESQ 61
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALL-RHGISLWIDVP 195
+L +L+ LV+ G G V AN A+L GI ++++VP
Sbjct: 62 LLDELTHETGLVLATGGGVVLDPANRAVLAARGIVVYLNVP 102
>gi|420184513|ref|ZP_14690622.1| putative shikimate kinase [Staphylococcus epidermidis NIHLM040]
gi|394257164|gb|EJE02086.1| putative shikimate kinase [Staphylococcus epidermidis NIHLM040]
Length = 170
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 9/131 (6%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+ LVG KT +GK+L+D Y D D+ + E +S F + EKG++ ET
Sbjct: 8 IILVGFMGTGKTTVGKYLSDLYNLSYVDLDNFI-EVNECKSIPDIFNDIGEKGFRSLETR 66
Query: 156 VLKQ-LSSMGRLVVCAGNGAVQSSANLALLRHGIS-LWIDVPPGMVARM----DHSGFPE 209
LK L++ ++ G G ++ + +L LL++ +W+D ++ + H +
Sbjct: 67 YLKACLNTFD--IISTGGGIIEDTNSLKLLKNQKHVVWLDCDIEIIFKRVKNDSHRPNAK 124
Query: 210 SEVLPQLFALY 220
S+ L QL ALY
Sbjct: 125 SKNLNQLDALY 135
>gi|194290973|ref|YP_002006880.1| shikimate kinase [Cupriavidus taiwanensis LMG 19424]
gi|193224808|emb|CAQ70819.1| shikimate kinase I [Cupriavidus taiwanensis LMG 19424]
Length = 255
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++F VG+ A KT +G+ +A L Y +FDSD EA G F E G++ E
Sbjct: 63 NLFFVGLMGAGKTTVGRTVARRLHYPFFDSDH-ELEAHCGVRIPVIFELEGEAGFRDREA 121
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR 185
++++L+ +V+ G GAV + N +L+
Sbjct: 122 AMIRELAQRQGIVLATGGGAVLRAENREVLK 152
>gi|431929547|ref|YP_007242593.1| shikimate kinase [Thioflavicoccus mobilis 8321]
gi|431827850|gb|AGA88963.1| shikimate kinase [Thioflavicoccus mobilis 8321]
Length = 174
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 54/107 (50%), Gaps = 2/107 (1%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
++ ++FLVG A K+ +G+ LA+ L Y + DSD + + G F E G++
Sbjct: 2 IRAQNIFLVGPMGAGKSTIGRQLAEVLSYEFKDSDQEI-QRRTGVDIPTIFEFEGEAGFR 60
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLA-LLRHGISLWIDVPP 196
E ++L++L R+V+ G GAV N L G+ +++ P
Sbjct: 61 DRERQILEELIQGERIVLATGGGAVLRPENRQDLTARGVVVYLHCSP 107
>gi|28899519|ref|NP_799124.1| shikimate kinase I [Vibrio parahaemolyticus RIMD 2210633]
gi|91227283|ref|ZP_01261708.1| shikimate kinase I [Vibrio alginolyticus 12G01]
gi|260364778|ref|ZP_05777361.1| shikimate kinase [Vibrio parahaemolyticus K5030]
gi|260903212|ref|ZP_05911607.1| shikimate kinase [Vibrio parahaemolyticus AQ4037]
gi|269964447|ref|ZP_06178688.1| Shikimate kinase [Vibrio alginolyticus 40B]
gi|417320883|ref|ZP_12107424.1| shikimate kinase I [Vibrio parahaemolyticus 10329]
gi|31076606|sp|Q87L67.1|AROK_VIBPA RecName: Full=Shikimate kinase; Short=SK
gi|28807755|dbj|BAC61008.1| shikimate kinase [Vibrio parahaemolyticus RIMD 2210633]
gi|91188677|gb|EAS74966.1| shikimate kinase I [Vibrio alginolyticus 12G01]
gi|269830785|gb|EEZ85003.1| Shikimate kinase [Vibrio alginolyticus 40B]
gi|308108453|gb|EFO45993.1| shikimate kinase [Vibrio parahaemolyticus AQ4037]
gi|308114502|gb|EFO52042.1| shikimate kinase [Vibrio parahaemolyticus K5030]
gi|328472348|gb|EGF43218.1| shikimate kinase I [Vibrio parahaemolyticus 10329]
Length = 172
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L + DSD+++ E G + + F E+G+++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRHLAQQLHMEFVDSDTVIEERTGAD-ISWVFDVEGEEGFRKREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
VL+ L+ +V+ G G+V+S N L G+ ++++
Sbjct: 65 AVLEDLTQEQGIVLATGGGSVKSKENRNRLSARGVVVYLE 104
>gi|229496775|ref|ZP_04390486.1| shikimate kinase [Porphyromonas endodontalis ATCC 35406]
gi|229316321|gb|EEN82243.1| shikimate kinase [Porphyromonas endodontalis ATCC 35406]
Length = 179
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 54/104 (51%), Gaps = 2/104 (1%)
Query: 92 KGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQ 151
+ T +FLVG + K+ +G+ LAD + + D+D + E ES A F E+ +++
Sbjct: 4 RDTPIFLVGYMGSGKSTIGRRLADRMEREFIDTDIFI-ERRFHESVANMFTSVGEEAFRR 62
Query: 152 AETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDV 194
E V+++LS V+ G G N+ L+ G+++++ V
Sbjct: 63 REAVVIEELSGFPNAVIATGGGLPCHHGNMELMNQCGVTVFLQV 106
>gi|311280725|ref|YP_003942956.1| shikimate kinase [Enterobacter cloacae SCF1]
gi|308749920|gb|ADO49672.1| Shikimate kinase [Enterobacter cloacae SCF1]
Length = 184
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 73/140 (52%), Gaps = 8/140 (5%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+FL+G KT +G+ L++A +Y + D+D ++ + A + A G++ ET+
Sbjct: 5 IFLIGARGCGKTTIGRRLSEACQYQFIDTDQILQQRA-QMTVADIVANEGWSGFRARETQ 63
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMVA-RMDHSGFPESEVL 213
L+ +++ + V+ G G + + N +R +G+ +++ P ++A R++ FPE
Sbjct: 64 TLQTVTA-AQHVIATGGGIILAPVNREFMRQNGVVIYLKAPVSVLAGRLE--AFPEESQR 120
Query: 214 PQLFA--LYKEMRDGYATAD 231
P L + +E+R+ A D
Sbjct: 121 PTLTGKPIAEEVREVLAQRD 140
>gi|354593544|ref|ZP_09011587.1| 3-dehydroquinate synthase [Commensalibacter intestini A911]
gi|353672655|gb|EHD14351.1| 3-dehydroquinate synthase [Commensalibacter intestini A911]
Length = 549
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 60/117 (51%), Gaps = 3/117 (2%)
Query: 90 ELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGY 149
++K + L+G+ A KT +G+ LA +L + DSD V E G + A F + E +
Sbjct: 6 KIKHQPITLIGLMGAGKTTIGRKLAHSLSIPFVDSDHEV-EKTAGCTIADIFEQYGEAEF 64
Query: 150 QQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVP-PGMVARMDH 204
++ E EV+++L +V+ G GA + ALL+ ++W+ ++ R+ H
Sbjct: 65 RRVEHEVIRRLIKQAPIVLATGGGAFMHAKTRALLKERTTTIWLHCSVETLLERISH 121
>gi|359785005|ref|ZP_09288166.1| shikimate kinase [Halomonas sp. GFAJ-1]
gi|359297700|gb|EHK61927.1| shikimate kinase [Halomonas sp. GFAJ-1]
Length = 192
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FL+G A K+ +G+ LA L ++DSD + + G + F E G++Q E
Sbjct: 6 NLFLIGPMGAGKSTIGRLLAGELSRPFYDSDHAIQDRCGAD-IPWIFDVEGEPGFRQREI 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRH 186
+++ +L+ + +VV G GAV N LR
Sbjct: 65 QMIDELTRLSDVVVATGGGAVLREENRRALRE 96
>gi|261254111|ref|ZP_05946684.1| shikimate kinase I [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|417954458|ref|ZP_12597493.1| shikimate kinase I [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|260937502|gb|EEX93491.1| shikimate kinase I [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|342815361|gb|EGU50282.1| shikimate kinase I [Vibrio orientalis CIP 102891 = ATCC 33934]
Length = 172
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L + DSD+++ E G + A F E G+++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRHLAQQLHMEFVDSDTVIEERTGAD-IAWVFDVEGEDGFRKREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
V+ L+ +V+ G G+++S N L GI ++++
Sbjct: 65 SVINDLTDEQGIVLATGGGSIKSKENRNRLSARGIVVYLE 104
>gi|257784463|ref|YP_003179680.1| shikimate kinase [Atopobium parvulum DSM 20469]
gi|257472970|gb|ACV51089.1| shikimate kinase [Atopobium parvulum DSM 20469]
Length = 436
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Query: 87 ISTELKGT--SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRES 144
IS E+ + ++ L+GM KT G+ LA L + D+D L+ E +AA +
Sbjct: 271 ISQEIHSSKENIVLIGMPGVGKTSTGEALAKLLNRPWIDTDFLI-EQKVHCNAATYLQTY 329
Query: 145 DEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRH 186
E ++ E E+++++SSM +V+ G GAV + +N LLR
Sbjct: 330 GEAAFRSLEHEIIQEISSMTGVVISCGGGAVVTPSNYQLLRQ 371
>gi|418411949|ref|ZP_12985215.1| shikimate kinase [Staphylococcus epidermidis BVS058A4]
gi|410891532|gb|EKS39329.1| shikimate kinase [Staphylococcus epidermidis BVS058A4]
Length = 170
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 9/131 (6%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+ LVG KT +GK+L+D Y D D+ + E +S F + EKG++ ET
Sbjct: 8 IILVGFMGTGKTTVGKYLSDLYNLSYVDLDNFI-EVNECKSIPDIFNDIGEKGFRSLETR 66
Query: 156 VLKQ-LSSMGRLVVCAGNGAVQSSANLALLRHGIS-LWIDVPPGMVARM----DHSGFPE 209
LK L++ ++ G G ++ + +L LL++ +W+D ++ + H +
Sbjct: 67 YLKACLNTFD--IISTGGGIIEDTNSLKLLKNQKHVVWLDCDIEIIFKRVKNDSHRPNAK 124
Query: 210 SEVLPQLFALY 220
S+ L QL ALY
Sbjct: 125 SKNLNQLDALY 135
>gi|291616498|ref|YP_003519240.1| AroL [Pantoea ananatis LMG 20103]
gi|291151528|gb|ADD76112.1| AroL [Pantoea ananatis LMG 20103]
Length = 191
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 6/130 (4%)
Query: 89 TELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSD-SLVFEAAGGESAAKAFRESDEK 147
T L S+FL+G KT +G+ L+ AL Y + D+D L F + A+ +
Sbjct: 15 TALMSLSIFLIGARGCGKTTIGEALSHALGYAFRDTDHHLQFTTQ--RTVAEIVAAEGWE 72
Query: 148 GYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMVARMDHSG 206
++ ET+ LK +++ ++ G G V + N +R HG +W+ PP ++AR S
Sbjct: 73 SFRARETDSLKAVTAPS-TIIATGGGMVLAEGNRRYMREHGQVIWLSAPPDILARRLESQ 131
Query: 207 FPESEVLPQL 216
PE+ P L
Sbjct: 132 -PENAQRPTL 140
>gi|238764517|ref|ZP_04625464.1| Shikimate kinase 2 [Yersinia kristensenii ATCC 33638]
gi|238697219|gb|EEP89989.1| Shikimate kinase 2 [Yersinia kristensenii ATCC 33638]
Length = 174
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 82/169 (48%), Gaps = 14/169 (8%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A KT +GK L+ AL Y + D+D L + S A+ G++ E+
Sbjct: 4 TIFLVGARGAGKTTIGKALSQALGYRFIDTD-LFMQQTLQSSVAEIVAREGWDGFRLRES 62
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMVA-RMDHSGFPESEV 212
L+ +++ + VV G GAV S N +R HG+ L++ ++A R+ PE
Sbjct: 63 IALQTVTA-PKTVVATGGGAVLSLDNRTFMRQHGVVLYLRASANVLAERLAED--PEDAQ 119
Query: 213 LPQLFA--LYKEMRDGYATADVTVSLQKVASQLGYDDLDAVTTEDMTLE 259
P L + +EM+ DV S + + ++ + LDA + + +E
Sbjct: 120 RPSLTGKPIVEEMQ------DVLASREPLYQEVAHHMLDATQSPEEVVE 162
>gi|258620496|ref|ZP_05715534.1| Shikimate kinase [Vibrio mimicus VM573]
gi|258625708|ref|ZP_05720587.1| Shikimate kinase [Vibrio mimicus VM603]
gi|261211198|ref|ZP_05925487.1| shikimate kinase I [Vibrio sp. RC341]
gi|262166649|ref|ZP_06034386.1| shikimate kinase I [Vibrio mimicus VM223]
gi|262170434|ref|ZP_06038112.1| shikimate kinase I [Vibrio mimicus MB-451]
gi|262401918|ref|ZP_06078483.1| shikimate kinase I [Vibrio sp. RC586]
gi|424809355|ref|ZP_18234736.1| shikimate kinase I [Vibrio mimicus SX-4]
gi|449145063|ref|ZP_21775873.1| shikimate kinase [Vibrio mimicus CAIM 602]
gi|258581946|gb|EEW06816.1| Shikimate kinase [Vibrio mimicus VM603]
gi|258587375|gb|EEW12086.1| Shikimate kinase [Vibrio mimicus VM573]
gi|260839699|gb|EEX66310.1| shikimate kinase I [Vibrio sp. RC341]
gi|261891510|gb|EEY37496.1| shikimate kinase I [Vibrio mimicus MB-451]
gi|262026365|gb|EEY45033.1| shikimate kinase I [Vibrio mimicus VM223]
gi|262351890|gb|EEZ01021.1| shikimate kinase I [Vibrio sp. RC586]
gi|342323289|gb|EGU19074.1| shikimate kinase I [Vibrio mimicus SX-4]
gi|449079381|gb|EMB50305.1| shikimate kinase [Vibrio mimicus CAIM 602]
Length = 174
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L + DSD+++ E G + A F E+G+++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRHLAQQLHMEFIDSDTVIEERTGAD-IAWVFDVEGEEGFRKREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
V+ L+ +V+ G G+V S N L GI ++++
Sbjct: 65 AVINDLTEQQGIVLATGGGSVISKENRNRLSARGIVVYLE 104
>gi|348025523|ref|YP_004765327.1| shikimate kinase [Megasphaera elsdenii DSM 20460]
gi|341821576|emb|CCC72500.1| shikimate kinase [Megasphaera elsdenii DSM 20460]
Length = 168
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 5/139 (3%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L+GM K+ LGK LA L ++D+D ++ E G++ + F S E ++ AE
Sbjct: 6 NIILIGMPGCGKSTLGKALAKRLGRDFYDADDVIVEQE-GKTIPELFASS-EDCFRDAEV 63
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWID-VPPGMVARMDHSGFP-ESE 211
+ L+ +VV G G V+ S N+ + + G ++D P +V+ +D S P +
Sbjct: 64 RASQFLAHKSGIVVACGGGVVKRSENMDIFKKTGTVFFLDRSPDDIVSDVDVSTRPLLKD 123
Query: 212 VLPQLFALYKEMRDGYATA 230
+++ LY E D Y A
Sbjct: 124 GKQKVYDLYDERIDLYRNA 142
>gi|330447076|ref|ZP_08310726.1| shikimate kinase family protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328491267|dbj|GAA05223.1| shikimate kinase family protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 172
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L +FDSD+++ E G + + F E G++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRHLAQQLHMEFFDSDTVIEERTGAD-ISWVFDVEGEDGFRVREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
V+ L+ +V+ G G+V+S N L GI ++++
Sbjct: 65 AVIDDLTQEQGIVLATGGGSVKSKENRNRLSARGIVVYLE 104
>gi|312882786|ref|ZP_07742520.1| shikimate kinase I [Vibrio caribbenthicus ATCC BAA-2122]
gi|309369570|gb|EFP97088.1| shikimate kinase I [Vibrio caribbenthicus ATCC BAA-2122]
Length = 172
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L + DSD+++ E G + A F E+G++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRHLAQQLHMEFVDSDTVIEERTGAD-IAWVFDVEGEEGFRDREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
+V+ L+ +V+ G G++ S N L GI ++++
Sbjct: 65 KVINDLTEEQGIVLATGGGSINSRENRNRLSARGIVVYLE 104
>gi|410943065|ref|ZP_11374806.1| bifunctional shikimate kinase/3-dehydroquinate synthase
[Gluconobacter frateurii NBRC 101659]
Length = 560
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 15/151 (9%)
Query: 94 TSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAE 153
++V LVGM A KT +G+ LA + D+D+ + E A G + + F E ++ E
Sbjct: 21 STVVLVGMMGAGKTTVGRRLAQVYGLPFIDADAEI-ERAAGCTIPEIFARHGEAYFRAGE 79
Query: 154 TEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMVARMDHS------- 205
V+++L ++ G GA + L+R H +S+W+ P ++ R H
Sbjct: 80 RRVIQRLIKGPPCILATGGGAWMDAQTRQLVRKHAVSVWLRAPVHVLLRRVHGRGGRPLL 139
Query: 206 --GFPESEVLPQLFALYKEMRDGYATADVTV 234
G PE + + A Y YA AD+ +
Sbjct: 140 AQGSPEDIMTRLVGARYPV----YAEADIII 166
>gi|332800385|ref|YP_004461884.1| shikimate kinase [Tepidanaerobacter acetatoxydans Re1]
gi|438003764|ref|YP_007273507.1| Shikimate kinase I [Tepidanaerobacter acetatoxydans Re1]
gi|332698120|gb|AEE92577.1| Shikimate kinase [Tepidanaerobacter acetatoxydans Re1]
gi|432180558|emb|CCP27531.1| Shikimate kinase I [Tepidanaerobacter acetatoxydans Re1]
Length = 171
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L+GM + KT +G+ LA + ++D D + E G+ + F E+ ++ E+
Sbjct: 7 NIVLIGMPGSGKTSIGRILAKKINMCFYDLDEYI-ERKSGKRITEIFAIYGERHFRTLES 65
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALL-RHGISLWIDVP 195
+K++SS V+ G G V S N+ +L + GI +I+ P
Sbjct: 66 CAVKEISSKTNAVISTGGGVVLDSKNMHVLNKRGIIFFINRP 107
>gi|160942778|ref|ZP_02090019.1| hypothetical protein FAEPRAM212_00255 [Faecalibacterium prausnitzii
M21/2]
gi|158445943|gb|EDP22946.1| shikimate kinase [Faecalibacterium prausnitzii M21/2]
Length = 420
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 4/123 (3%)
Query: 74 EDPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAG 133
ED V++ A + E ++ LVGM + K+ LG+ LA L D D + +A
Sbjct: 240 EDAPGEVRRITAALRRET--LNIALVGMPSCGKSTLGRLLAKQLGRPLVDLDEEIVKA-D 296
Query: 134 GESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWI 192
G S F E+G++ E + + LV+ G GAV+ + N+ LR +G+ L+I
Sbjct: 297 GRSIPDIFAAEGEEGFRAKEAAQIARFGKEKGLVLSCGGGAVKRAENVRALRQNGVVLFI 356
Query: 193 DVP 195
D P
Sbjct: 357 DRP 359
>gi|126699447|ref|YP_001088344.1| Shikimate kinase (SK) [Clostridium difficile 630]
gi|254975474|ref|ZP_05271946.1| shikimate kinase [Clostridium difficile QCD-66c26]
gi|255092862|ref|ZP_05322340.1| shikimate kinase [Clostridium difficile CIP 107932]
gi|255101011|ref|ZP_05329988.1| shikimate kinase [Clostridium difficile QCD-63q42]
gi|255306865|ref|ZP_05351036.1| shikimate kinase [Clostridium difficile ATCC 43255]
gi|255314604|ref|ZP_05356187.1| shikimate kinase [Clostridium difficile QCD-76w55]
gi|255517278|ref|ZP_05384954.1| shikimate kinase [Clostridium difficile QCD-97b34]
gi|255650384|ref|ZP_05397286.1| shikimate kinase [Clostridium difficile QCD-37x79]
gi|260683498|ref|YP_003214783.1| shikimate kinase [Clostridium difficile CD196]
gi|260687094|ref|YP_003218227.1| shikimate kinase [Clostridium difficile R20291]
gi|306520340|ref|ZP_07406687.1| shikimate kinase [Clostridium difficile QCD-32g58]
gi|384361116|ref|YP_006198968.1| shikimate kinase [Clostridium difficile BI1]
gi|423091448|ref|ZP_17079569.1| shikimate kinase [Clostridium difficile 70-100-2010]
gi|115250884|emb|CAJ68709.1| Shikimate kinase (SK) [Clostridium difficile 630]
gi|260209661|emb|CBA63365.1| shikimate kinase [Clostridium difficile CD196]
gi|260213110|emb|CBE04513.1| shikimate kinase [Clostridium difficile R20291]
gi|357554930|gb|EHJ36623.1| shikimate kinase [Clostridium difficile 70-100-2010]
Length = 177
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+ L+GM + KT +GK LA + D D + + + +S A+ F E E ++ ET+
Sbjct: 9 LILIGMPGSGKTTIGKLLAKEYNCSFCDMDDYIIQISQ-KSIAELFSEG-EDIFRNYETQ 66
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVP 195
++LS + V+ G G ++ N+ +L+ GI ++ID P
Sbjct: 67 ACRELSISDKTVISTGGGVIKKDVNMEILKETGIIIFIDRP 107
>gi|300024675|ref|YP_003757286.1| 3-dehydroquinate synthase [Hyphomicrobium denitrificans ATCC 51888]
gi|299526496|gb|ADJ24965.1| 3-dehydroquinate synthase [Hyphomicrobium denitrificans ATCC 51888]
Length = 564
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 15/150 (10%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
S+ LVG+ K+ +GK LA L + D+D + E A ++ + F + E ++ E
Sbjct: 18 SIVLVGLMGCGKSSIGKRLAARLGLPFIDADEEI-ERAAAKTINEIFADHGEAHFRDGER 76
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWI--DVPPGM--VARMD-----H 204
+V+ +L S G V+ G GA +R +G+S+W+ D+P M V + D
Sbjct: 77 KVISRLLSNGPQVLATGGGAYMHPETRQRIRENGVSIWLRADLPVLMRRVMKRDTRPLLR 136
Query: 205 SGFPESEVLPQLFALYKEMRDGYATADVTV 234
G PE+ + + A Y YA AD+TV
Sbjct: 137 EGNPEATMRKLIEARYPI----YAEADMTV 162
>gi|221133688|ref|ZP_03559993.1| shikimate kinase I [Glaciecola sp. HTCC2999]
Length = 171
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LAD L +FDSD + E+ G A F E+G+++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRHLADELHLEFFDSDHEI-ESKTGADIAWIFDLEGEEGFRKREL 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSA 179
+ + +LS +V+ G G++ + A
Sbjct: 65 DTINELSDKQGIVLATGGGSIITPA 89
>gi|422022018|ref|ZP_16368527.1| shikimate kinase [Providencia sneebia DSM 19967]
gi|414097768|gb|EKT59421.1| shikimate kinase [Providencia sneebia DSM 19967]
Length = 165
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 97 FLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEV 156
+++G A KT +GK LA+ Y + D+D L+ E A G++ A+ + + ++Q E++V
Sbjct: 3 YIIGPRGAGKTTIGKKLAEHKEYNFVDTDKLIVERA-GKTIAQIVEQHGWEYFRQLESDV 61
Query: 157 LKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMVAR 201
L+ L L++ G G + S N ++R +G +++ P ++A+
Sbjct: 62 LESLLQ-PNLIISTGGGIILSEENQRVMRNNGTVIYLSTSPQVLAQ 106
>gi|332160700|ref|YP_004297277.1| shikimate kinase II [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|325664930|gb|ADZ41574.1| shikimate kinase II [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|330862479|emb|CBX72636.1| shikimate kinase 2 [Yersinia enterocolitica W22703]
Length = 174
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 14/169 (8%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++F+VG A KT +GK LA AL Y + D+D L + S A+ G++ E+
Sbjct: 4 TIFMVGARGAGKTTIGKALAQALEYRFIDTD-LFMQQTLQSSVAEIVAREGWDGFRLRES 62
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMVA-RMDHSGFPESEV 212
L+ +++ + VV G GAV S N +R HG+ +++ ++A R+ PE
Sbjct: 63 MALQTVTA-PKTVVATGGGAVLSHDNRTFMRQHGVVIYLRASANVLAERLAED--PEDAQ 119
Query: 213 LPQLFA--LYKEMRDGYATADVTVSLQKVASQLGYDDLDAVTTEDMTLE 259
P L + +EM DV S + + ++ + LDA + +E
Sbjct: 120 RPSLTGKPIVEEM------LDVLASREPLYQEVAHHVLDATQPPEEVVE 162
>gi|313202168|ref|YP_004040826.1| shikimate kinase [Methylovorus sp. MP688]
gi|312441484|gb|ADQ85590.1| Shikimate kinase [Methylovorus sp. MP688]
Length = 168
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 2/99 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++F VG+ A KT +G+ LA L ++DSD + E G S F E G+++ E+
Sbjct: 4 NIFFVGLMGAGKTTVGRVLAKHLHKAFYDSDHEI-ERRTGVSIPYIFEVEGEAGFRRRES 62
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWI 192
++ +L M +VV G GAV N L+ HG +++
Sbjct: 63 AMIDELVRMPDVVVATGGGAVLLDENRKNLKQHGTVIYL 101
>gi|323494822|ref|ZP_08099919.1| shikimate kinase I [Vibrio brasiliensis LMG 20546]
gi|323310930|gb|EGA64097.1| shikimate kinase I [Vibrio brasiliensis LMG 20546]
Length = 172
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L + DSD+++ E G + A F E+G++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRHLAQQLHMEFVDSDTVIEERTGAD-IAWVFDVEGEEGFRVREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
+V+ L+ +V+ G G+++S N L GI ++++
Sbjct: 65 KVINDLTEEQGIVLATGGGSIKSKENRNRLSARGIVVYLE 104
>gi|88811951|ref|ZP_01127204.1| shikimate kinase I [Nitrococcus mobilis Nb-231]
gi|88790835|gb|EAR21949.1| shikimate kinase I [Nitrococcus mobilis Nb-231]
Length = 174
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 55/115 (47%), Gaps = 3/115 (2%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
VFL+G A K+ +G+ LA L + DSD V E G A+ F E G++ E
Sbjct: 7 VFLIGPMGAGKSAVGQVLAQRLGRRFLDSDR-VLEERTGVDIARIFDVEGEVGFRAREEI 65
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVP-PGMVARMDHSGFP 208
VL+ L+ +V+ G GAV N LR G+++++ + R HS P
Sbjct: 66 VLQDLTRHDGVVLATGGGAVLRERNRVYLRERGLTVYLRTSIDTQLIRTRHSNRP 120
>gi|407715321|ref|YP_006836601.1| shikimate kinase [Cycloclasticus sp. P1]
gi|407255657|gb|AFT66098.1| Shikimate kinase I [Cycloclasticus sp. P1]
Length = 172
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 94 TSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAE 153
+++LVG A K+ +GK LA L ++D+D+ + + G E + F E+G++ E
Sbjct: 5 NNIYLVGPMAAGKSTIGKLLARRLNKAFYDTDAEIIKCTGVEISL-IFELEGEEGFRSRE 63
Query: 154 TEVLKQLSSMGRLVVCAGNGAVQSSANLALL 184
T+ LK LS + V+ G G V S N +L
Sbjct: 64 TDKLKLLSVLDGAVIATGGGIVLSEENRKVL 94
>gi|254487977|ref|ZP_05101182.1| shikimate kinase [Roseobacter sp. GAI101]
gi|214044846|gb|EEB85484.1| shikimate kinase [Roseobacter sp. GAI101]
Length = 198
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+V LVGM A KT +G+ LA L + DSD + EAA + + F E +++ E+
Sbjct: 23 TVVLVGMMGAGKTAVGRALALKLGVPFLDSDHEI-EAAANLTVPEIFERDGEPFFRKRES 81
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
EV+ +L ++ G GA + N + + G+S+W+D
Sbjct: 82 EVIARLLDEAPGILSTGGGAFLAQVNRSNISTKGVSVWLD 121
>gi|52841167|ref|YP_094966.1| shikimate kinase I [Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
gi|54293907|ref|YP_126322.1| shikimate kinase I [Legionella pneumophila str. Lens]
gi|54296953|ref|YP_123322.1| shikimate kinase I [Legionella pneumophila str. Paris]
gi|148360419|ref|YP_001251626.1| shikimate kinase [Legionella pneumophila str. Corby]
gi|296106515|ref|YP_003618215.1| shikimate kinase [Legionella pneumophila 2300/99 Alcoy]
gi|378776885|ref|YP_005185322.1| shikimate kinase [Legionella pneumophila subsp. pneumophila ATCC
43290]
gi|397663491|ref|YP_006505029.1| shikimate kinase I [Legionella pneumophila subsp. pneumophila]
gi|397666611|ref|YP_006508148.1| shikimate kinase I [Legionella pneumophila subsp. pneumophila]
gi|81601437|sp|Q5WXX6.1|AROK_LEGPL RecName: Full=Shikimate kinase; Short=SK
gi|81601918|sp|Q5X6H1.1|AROK_LEGPA RecName: Full=Shikimate kinase; Short=SK
gi|81603443|sp|Q5ZX01.1|AROK_LEGPH RecName: Full=Shikimate kinase; Short=SK
gi|166219247|sp|A5IFY0.1|AROK_LEGPC RecName: Full=Shikimate kinase; Short=SK
gi|52628278|gb|AAU27019.1| shikimate kinase [Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
gi|53750738|emb|CAH12145.1| shikimate kinase I [Legionella pneumophila str. Paris]
gi|53753739|emb|CAH15197.1| shikimate kinase I [Legionella pneumophila str. Lens]
gi|148282192|gb|ABQ56280.1| shikimate kinase [Legionella pneumophila str. Corby]
gi|295648416|gb|ADG24263.1| shikimate kinase [Legionella pneumophila 2300/99 Alcoy]
gi|307609725|emb|CBW99236.1| shikimate kinase I [Legionella pneumophila 130b]
gi|364507699|gb|AEW51223.1| shikimate kinase [Legionella pneumophila subsp. pneumophila ATCC
43290]
gi|395126902|emb|CCD05085.1| shikimate kinase I [Legionella pneumophila subsp. pneumophila]
gi|395130022|emb|CCD08255.1| shikimate kinase I [Legionella pneumophila subsp. pneumophila]
Length = 175
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
+K ++FL+G A K+ +G+ LA L+ ++DSD ++ E AG + + F E+G++
Sbjct: 4 VKVRNIFLIGPMGAGKSTIGRALAKELKLEFYDSDEVIEERAGAD-ISWIFDIEGEEGFR 62
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSAN 180
+ E +V+ +L+ +V+ G G V + N
Sbjct: 63 RREQKVIDELTQKTNIVLATGGGVVITPEN 92
>gi|222149984|ref|YP_002550941.1| shikimate kinase [Agrobacterium vitis S4]
gi|221736966|gb|ACM37929.1| shikimate kinase [Agrobacterium vitis S4]
Length = 197
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 7/146 (4%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ VG+ A K+ +G+ +A L + D+D+ + E + ++ F E ++ ET
Sbjct: 24 NLIFVGLMGAGKSAIGRLVAQQLNLPFIDTDTEI-ERVSRMTISELFAAYGETEFRALET 82
Query: 155 EVLKQLSSMGRLVVCAGNGA-VQSSANLALLRHGISLW----IDVPPGMVARMDHSGFPE 209
V+++L G VV G GA + + R GIS+W +DV V + DH +
Sbjct: 83 RVIRRLLRSGPKVVSTGGGAFINDRTRRQIERGGISIWLKADLDVLWERVNKRDHRPLLK 142
Query: 210 SEVLPQ-LFALYKEMRDGYATADVTV 234
+E Q L L E Y AD+TV
Sbjct: 143 TEHPKQTLEKLMLERYPIYQRADITV 168
>gi|392409698|ref|YP_006446305.1| 3-dehydroquinate synthase, shikimate kinase [Desulfomonile tiedjei
DSM 6799]
gi|390622834|gb|AFM24041.1| 3-dehydroquinate synthase, shikimate kinase [Desulfomonile tiedjei
DSM 6799]
Length = 532
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L G K+ +GK LA L + D+D+++ E G+S A F + E+ ++ E
Sbjct: 10 NIILTGFMGTGKSVVGKRLAALLGRNFLDTDTII-EQGSGKSVAAIFSQEGEQCFRGYEK 68
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALL-RHGISLWID 193
EV ++LS V+ G G + N LL R+GI + +D
Sbjct: 69 EVCRELSETRGFVIATGGGMLLDPENRKLLSRNGIIIRLD 108
>gi|313672192|ref|YP_004050303.1| shikimate kinase [Calditerrivibrio nitroreducens DSM 19672]
gi|312938948|gb|ADR18140.1| Shikimate kinase [Calditerrivibrio nitroreducens DSM 19672]
Length = 175
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+++ +G KT + K +AD L + D D ++ + ++ + FRE+ E+ ++ E
Sbjct: 3 NIYFIGFMGTGKTTISKLIADHLNMKWTDLDDMI-QQKEKKTVVEIFRENGEEYFRNLEK 61
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRH 186
EVLK ++ G VV G G V N+ +++
Sbjct: 62 EVLKDVAGKGGYVVSTGGGIVIVDENVKIMKE 93
>gi|332286104|ref|YP_004418015.1| shikimate kinase [Pusillimonas sp. T7-7]
gi|330430057|gb|AEC21391.1| shikimate kinase [Pusillimonas sp. T7-7]
Length = 198
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Query: 94 TSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAE 153
T +FL+GM A KT +G+ LA L + D D EA G + F E+G+++ E
Sbjct: 27 TPIFLIGMMGAGKTTIGRHLARILDRDFVDLDH-QLEARCGVRVSLIFDIEGEEGFRKRE 85
Query: 154 TEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWI 192
+ L + S +V+ G GAV +S N L+ G+ +++
Sbjct: 86 SVALDECSQRCNIVLATGGGAVLASENQRYLKERGVVVYL 125
>gi|416125280|ref|ZP_11595878.1| shikimate kinase family protein [Staphylococcus epidermidis FRI909]
gi|319400877|gb|EFV89096.1| shikimate kinase family protein [Staphylococcus epidermidis FRI909]
Length = 170
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 9/131 (6%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+ LVG KT +GK+L+D Y D D+ + E +S F + EKG++ ET+
Sbjct: 8 IILVGFMGTGKTTVGKYLSDLYNLSYVDLDNFI-EVNECKSIPDIFNDIGEKGFRSLETK 66
Query: 156 VLKQ-LSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMVARM----DHSGFPE 209
LK L++ ++ G G ++ + +L LL+ +W+D ++ + H +
Sbjct: 67 YLKACLNTFD--IISTGGGIIEDTNSLKLLKSQKHVVWLDCDIEIIFKRVKNDSHRPNAK 124
Query: 210 SEVLPQLFALY 220
S+ L QL ALY
Sbjct: 125 SKNLNQLDALY 135
>gi|304311963|ref|YP_003811561.1| shikimate kinase [gamma proteobacterium HdN1]
gi|301797696|emb|CBL45918.1| Shikimate kinase I protein [gamma proteobacterium HdN1]
Length = 175
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 15/162 (9%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+V L+G A K+ +G+ LA LRY + DSD + EA G F E+G+++ E
Sbjct: 6 NVILIGPMGAGKSTIGRQLAALLRYEFVDSDHEI-EARTGADIPWIFDVEGEEGFRKREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSAN-LALLRHGISLW----IDVPPGMVARMDHSGFPE 209
V+ L+ +V+ G GA+ AN A+ G+ ++ I+ AR + +
Sbjct: 65 AVIDDLTQRQHIVLATGGGAILREANRRAMSARGVVVYLKTSIEQQLARTARDRNRPLLQ 124
Query: 210 SE----VLPQLFA----LYKEMRDGYATADVTVSLQKVASQL 243
+E VL +L A LY E+ D Y ++++VA+Q+
Sbjct: 125 TENPRKVLTELMAIRDPLYSEIAD-YVIETDGAAIREVATQI 165
>gi|410447732|ref|ZP_11301824.1| putative shikimate kinase 1 [SAR86 cluster bacterium SAR86E]
gi|409979312|gb|EKO36074.1| putative shikimate kinase 1 [SAR86 cluster bacterium SAR86E]
Length = 169
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++F+VG + KT +GK +AD L + D+D+ + E + G + F E G+++ ET
Sbjct: 2 NIFIVGPMGSGKTTVGKIVADELFLEFHDTDAKI-EESTGVTIDWIFDIEGESGFRKRET 60
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALL-RHGISLWIDVP 195
+LK++ ++ +V+ G G + + N LL G ++ P
Sbjct: 61 SILKEVVALNSIVLATGGGIIIAEENRELLASRGTVFYLHTP 102
>gi|420178235|ref|ZP_14684568.1| putative shikimate kinase [Staphylococcus epidermidis NIHLM057]
gi|420180043|ref|ZP_14686303.1| putative shikimate kinase [Staphylococcus epidermidis NIHLM053]
gi|394246861|gb|EJD92113.1| putative shikimate kinase [Staphylococcus epidermidis NIHLM057]
gi|394251475|gb|EJD96560.1| putative shikimate kinase [Staphylococcus epidermidis NIHLM053]
Length = 170
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 9/131 (6%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+ LVG KT +GK+L+D Y D D+ + E +S F + EKG++ ET+
Sbjct: 8 IILVGFMGTGKTTVGKYLSDLYNLSYVDLDNFI-EVNECKSIPDIFNDIGEKGFRSLETK 66
Query: 156 VLKQ-LSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMVARM----DHSGFPE 209
LK L++ ++ G G ++ + +L LL+ +W+D ++ + H +
Sbjct: 67 YLKACLNTFD--IISTGGGIIEDTNSLKLLKSQKHVVWLDCDIEIIFKRVKNDSHRPNAK 124
Query: 210 SEVLPQLFALY 220
S+ L QL ALY
Sbjct: 125 SKNLNQLDALY 135
>gi|408372696|ref|ZP_11170396.1| shikimate kinase [Alcanivorax hongdengensis A-11-3]
gi|407767671|gb|EKF76108.1| shikimate kinase [Alcanivorax hongdengensis A-11-3]
Length = 164
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 103 NAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEVLKQLSS 162
A K+ LG+ LA L + ++DSD ++ E G + F E G+++ E EV+ +L+
Sbjct: 2 GAGKSTLGRHLAQQLDFPFYDSDRVIEEKTGAD-IPWIFDMEGEAGFRRREAEVIDELTR 60
Query: 163 MGRLVVCAGNGAVQSSANLALLRHG---ISLWIDV 194
+ +V+ G GAV + NL L + LW V
Sbjct: 61 LPGIVLATGGGAVTTPENLGYLHQRGCVVYLWTPV 95
>gi|420199472|ref|ZP_14705150.1| putative shikimate kinase [Staphylococcus epidermidis NIHLM031]
gi|394272254|gb|EJE16723.1| putative shikimate kinase [Staphylococcus epidermidis NIHLM031]
Length = 170
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 9/131 (6%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+ LVG KT +GK+L+D Y D D+ + E +S F + EKG++ ET+
Sbjct: 8 IILVGFMGTGKTTVGKYLSDLYNLSYVDLDNFI-EVNECKSIPDMFNDIGEKGFRSLETK 66
Query: 156 VLKQ-LSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMVARM----DHSGFPE 209
LK L++ ++ G G ++ + +L LL+ +W+D ++ + H +
Sbjct: 67 YLKACLNTFD--IISTGGGIIEDTNSLKLLKSQKHVVWLDCDIEIIFKRVKNDSHRPNAK 124
Query: 210 SEVLPQLFALY 220
S+ L QL ALY
Sbjct: 125 SKNLNQLDALY 135
>gi|333982156|ref|YP_004511366.1| shikimate kinase [Methylomonas methanica MC09]
gi|333806197|gb|AEF98866.1| Shikimate kinase [Methylomonas methanica MC09]
Length = 192
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 92 KGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQ 151
K +++L+G+ KT +GK LA AL+ ++DSD V E + G F E G++
Sbjct: 14 KLQNIYLIGLMGVGKTTIGKQLAKALQRPFYDSDK-VIEDSMGVDIPTIFSYEGEAGFRL 72
Query: 152 AETEVLKQLSSMGRLVVCAGNGAVQSSANLALLR 185
E V++QL+++ +V+ G G+V N L+
Sbjct: 73 REQAVIQQLTAIPGIVMATGGGSVIKPENREALK 106
>gi|189499916|ref|YP_001959386.1| shikimate kinase [Chlorobium phaeobacteroides BS1]
gi|238692295|sp|B3EPX3.1|AROK_CHLPB RecName: Full=Shikimate kinase; Short=SK
gi|189495357|gb|ACE03905.1| Shikimate kinase [Chlorobium phaeobacteroides BS1]
Length = 199
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 70/153 (45%), Gaps = 15/153 (9%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+FL G + + K+ +G LA++L Y + D D + E + + F E E +++ E
Sbjct: 7 IFLTGFSGSGKSTIGPLLANSLGYDFLDLDKEI-ERQADKPITRIFAEEGEDHFRERERA 65
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLAL-LRHGISLWIDVPPGMVA-RMDH--------- 204
+L+ + LVV G GA+Q++ +L + G +++ P ++A RM H
Sbjct: 66 MLESIVGRKELVVSLGGGALQNNDCFSLIISSGTMVYLHSSPLILAKRMSHKTDRPLMKG 125
Query: 205 ---SGFPESEVLPQLFALYKEMRDGYATADVTV 234
E+ ++ AL + Y TA + V
Sbjct: 126 ENGERLSSEEIEKKILALLEHREPRYKTAQIMV 158
>gi|169824935|ref|YP_001692546.1| shikimate 5-dehydrogenase [Finegoldia magna ATCC 29328]
gi|167831740|dbj|BAG08656.1| shikimate 5-dehydrogenase [Finegoldia magna ATCC 29328]
Length = 403
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 63/140 (45%), Gaps = 6/140 (4%)
Query: 92 KGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQ 151
K ++ LVGM + K+ + K +A D D ++ + G + F E +++
Sbjct: 243 KNMNIALVGMPGSGKSTVAKIIAKNTGKKLVDIDKIITQRYG--DISDIFAAQGENYFRK 300
Query: 152 AETEVLKQLSSMGRLVVCAGNGAVQSSANLALL-RHGISLWIDVPPGMVARMDHSGFPES 210
E+EVL++ S LV+ G GAV N L ++ + WID P ++R + + +
Sbjct: 301 IESEVLEEFSKEKNLVIATGGGAVTVKKNFYYLHQNSVVYWIDRPNSKLSRKNRPIYKTN 360
Query: 211 ---EVLPQLFALYKEMRDGY 227
E+ LY+ D Y
Sbjct: 361 TMREIRQNRNYLYRRFSDKY 380
>gi|350570766|ref|ZP_08939112.1| shikimate kinase [Neisseria wadsworthii 9715]
gi|349794714|gb|EGZ48524.1| shikimate kinase [Neisseria wadsworthii 9715]
Length = 172
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FL+G+ A KT +G+ L+ L ++DSD ++ E G S F E+G++ E
Sbjct: 7 NLFLIGLMGAGKTTIGRRLSQELGQPFYDSDHVICEKT-GVSIPTIFELEGEEGFRTREA 65
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPP 196
V+ +L+ +++ G GAV N L+ G+ +++ P
Sbjct: 66 CVINELTGKKGIILATGGGAVLREENRRCLQERGLVVYLHASP 108
>gi|149189157|ref|ZP_01867444.1| shikimate kinase I [Vibrio shilonii AK1]
gi|148836911|gb|EDL53861.1| shikimate kinase I [Vibrio shilonii AK1]
Length = 112
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L + DSD+++ E G + A F E+G+++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRHLAQQLHMEFVDSDTVIEERTGAD-IAWVFDVEGEEGFRKREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
V+ L+ +V+ G G+V+S N L GI ++++
Sbjct: 65 TVINDLTEQQGIVLATGGGSVKSKDNRNRLSARGIVVYLE 104
>gi|209965948|ref|YP_002298863.1| shikimate kinase [Rhodospirillum centenum SW]
gi|209959414|gb|ACJ00051.1| shikimate kinase [Rhodospirillum centenum SW]
Length = 198
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 69/150 (46%), Gaps = 15/150 (10%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ LVG+ A KT +GK LA L + D+D + E+A G + + F E ++ E
Sbjct: 12 TLVLVGLMGAGKTSIGKRLAAKLHLPFVDADHEI-ESAAGCTIQEIFDRFGEAQFRDGER 70
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMV----ARMDH----- 204
V+ +L V+ G GA AL+R G+S+W+ P ++ R D+
Sbjct: 71 RVIARLLEGQVRVLSTGGGAFMHPETRALIRERGLSVWLRAPLDLLVARTGRRDNRPLLK 130
Query: 205 SGFPESEVLPQLFALYKEMRDGYATADVTV 234
G P L AL + YA AD+TV
Sbjct: 131 QGNPRD----ILAALMAQRYPVYAEADITV 156
>gi|429085326|ref|ZP_19148302.1| Shikimate kinase III [Cronobacter condimenti 1330]
gi|426545447|emb|CCJ74343.1| Shikimate kinase III [Cronobacter condimenti 1330]
Length = 174
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 62/123 (50%), Gaps = 6/123 (4%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
++LVG KT G+ LA AL Y + D+D + E + A+ + G++ E++
Sbjct: 5 IYLVGARGCGKTTTGEALARALAYGFADTDRWLLEQTQ-MTVAQVVEQEGWAGFRARESQ 63
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMVA-RMDHSGFPESEVL 213
L +S+ VV G G V N +R HG+ ++++VP ++A R++ FPE
Sbjct: 64 ALHAVSAPA-TVVATGGGMVLREENREFMRQHGVVIYLNVPVDVLAQRLE--AFPEEGQR 120
Query: 214 PQL 216
P L
Sbjct: 121 PTL 123
>gi|227503542|ref|ZP_03933591.1| shikimate kinase [Corynebacterium accolens ATCC 49725]
gi|227075578|gb|EEI13541.1| shikimate kinase [Corynebacterium accolens ATCC 49725]
Length = 179
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 4/101 (3%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
V L+G A K+ +G+ L+ AL DSD L+ E A G+ + F E E +++ ET
Sbjct: 15 CVVLIGPPGAGKSTIGRRLSHALNCDLVDSDHLI-EMAEGKPCGEVFSEKGEPAFRELET 73
Query: 155 E-VLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDV 194
E V + L G VV G GAV +++ LL +++D+
Sbjct: 74 EHVAEALQKGG--VVSLGGGAVMTASTRELLERHTVVFLDI 112
>gi|386309553|ref|YP_006005609.1| shikimate kinase III [Yersinia enterocolitica subsp. palearctica
Y11]
gi|418241411|ref|ZP_12867940.1| shikimate kinase II [Yersinia enterocolitica subsp. palearctica
PhRBD_Ye1]
gi|433550629|ref|ZP_20506673.1| Shikimate kinase III [Yersinia enterocolitica IP 10393]
gi|318604573|emb|CBY26071.1| shikimate kinase III [Yersinia enterocolitica subsp. palearctica
Y11]
gi|351779212|gb|EHB21330.1| shikimate kinase II [Yersinia enterocolitica subsp. palearctica
PhRBD_Ye1]
gi|431789764|emb|CCO69713.1| Shikimate kinase III [Yersinia enterocolitica IP 10393]
Length = 174
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++F+VG A KT +GK LA AL Y + D+D L + S A+ G++ E+
Sbjct: 4 TIFMVGARGAGKTTIGKALAQALEYRFIDTD-LFMQQTLQSSVAEIVAREGWDGFRLRES 62
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWI 192
L+ +++ + VV G GAV S N +R HG+ +++
Sbjct: 63 MALQTVTA-PKTVVATGGGAVLSHDNRTFMRQHGVVIYL 100
>gi|296532540|ref|ZP_06895253.1| 3-dehydroquinate synthase [Roseomonas cervicalis ATCC 49957]
gi|296267141|gb|EFH13053.1| 3-dehydroquinate synthase [Roseomonas cervicalis ATCC 49957]
Length = 582
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 76/161 (47%), Gaps = 17/161 (10%)
Query: 88 STELKG---TSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRES 144
S L+G ++ L+GM A K+ +GK LA L + D+D+ + EAA G+ + F
Sbjct: 32 SQPLRGGAPRAIVLIGMPGAGKSSIGKRLAQRLGLPFRDADTEI-EAAAGQPITEIFARY 90
Query: 145 DEKGYQQAETEVLKQLSSMGRLVVCAGNG---------AVQSSANLAL-LRHGISLWIDV 194
E +++ E V+ +L + LV+ G G A++ S LA+ LR I + +
Sbjct: 91 GEPHFREGERRVIARLLAGPPLVLATGGGAYADAETRRAIRDSGALAVWLRCSIPVLLPR 150
Query: 195 PPGMVARMDHSGFPESEVLPQLFALYKEMRDGYATADVTVS 235
G R SEVL +L A + YA AD+ V+
Sbjct: 151 VSGRATRPMFLNQDPSEVLARLMAARHPL---YAEADIIVN 188
>gi|256545452|ref|ZP_05472814.1| shikimate dehydrogenase [Anaerococcus vaginalis ATCC 51170]
gi|256398848|gb|EEU12463.1| shikimate dehydrogenase [Anaerococcus vaginalis ATCC 51170]
Length = 495
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 6/142 (4%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L+GM KT LGK LA + D D L F G + + F + E +++ E+
Sbjct: 338 NIALIGMPAVGKTSLGKILAKNMNRKLVDID-LEFVKKYG-NIEEFFNKYGEDEFRKKES 395
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVARMDHSGFPESEVLP 214
+++K++S L++ G G V+ N L+ SL ++V + ++ G P S+
Sbjct: 396 QIIKEISKKTSLIISCGGGVVERKENYYFLKEN-SLIVEVKRNL-ENLETEGRPISKKY- 452
Query: 215 QLFALYKEMRDGYAT-ADVTVS 235
LF LYK+ + Y + DV V
Sbjct: 453 NLFDLYKKRKKLYDSFKDVEVE 474
>gi|374328418|ref|YP_005078602.1| shikimate kinase [Pseudovibrio sp. FO-BEG1]
gi|359341206|gb|AEV34580.1| Shikimate kinase [Pseudovibrio sp. FO-BEG1]
Length = 207
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 2/113 (1%)
Query: 81 KKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKA 140
+++ +I L + LVG+ K+ +G+ LA L + D+D+ + E A S ++
Sbjct: 12 RQRQQNILKRLGNKPIVLVGIMGCGKSTVGRRLAQYLSLNFVDADTEI-EKAADRSISEI 70
Query: 141 FRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGA-VQSSANLALLRHGISLWI 192
F E E ++Q E V+ +L G V+ G GA + + GIS+W+
Sbjct: 71 FAEHGESYFRQGEKRVIARLLDEGPQVLATGGGAFINEETRSRIKEKGISIWM 123
>gi|254360601|ref|ZP_04976750.1| shikimate kinase [Mannheimia haemolytica PHL213]
gi|261493380|ref|ZP_05989906.1| shikimate kinase [Mannheimia haemolytica serotype A2 str. BOVINE]
gi|261496646|ref|ZP_05993026.1| shikimate kinase [Mannheimia haemolytica serotype A2 str. OVINE]
gi|452745762|ref|ZP_21945594.1| shikimate kinase [Mannheimia haemolytica serotype 6 str. H23]
gi|153091141|gb|EDN73146.1| shikimate kinase [Mannheimia haemolytica PHL213]
gi|261307849|gb|EEY09172.1| shikimate kinase [Mannheimia haemolytica serotype A2 str. OVINE]
gi|261311024|gb|EEY12201.1| shikimate kinase [Mannheimia haemolytica serotype A2 str. BOVINE]
gi|452085901|gb|EME02292.1| shikimate kinase [Mannheimia haemolytica serotype 6 str. H23]
Length = 173
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FL+G A K+ +G+ LA L + DSDS++ E AG + F E+G+++ E
Sbjct: 6 NIFLIGPMGAGKSTIGRQLAQTLGMEFMDSDSVIEERAGAD-IDWIFDVEGEEGFRKREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
+L +L+ +V+ G G++ S N +L GI ++++
Sbjct: 65 RILNELTQNYGIVLSTGGGSILSKDNRNVLSARGIVIYLE 104
>gi|394990176|ref|ZP_10383008.1| hypothetical protein SCD_02602 [Sulfuricella denitrificans skB26]
gi|393790441|dbj|GAB72647.1| hypothetical protein SCD_02602 [Sulfuricella denitrificans skB26]
Length = 178
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG+ A KT +GK +A + DSD + E G + F E G++ ET
Sbjct: 4 NIFLVGLMGAGKTTVGKLIARHFSRPFVDSDHEI-EKRTGVNIPLIFELEGEAGFRIRET 62
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRH 186
V+++L+ +V+ G GA+ S N LR+
Sbjct: 63 AVIEELTRQNNIVLATGGGAILSQRNRDNLRN 94
>gi|85058612|ref|YP_454314.1| shikimate kinase [Sodalis glossinidius str. 'morsitans']
gi|108866271|sp|Q2NVB6.1|AROL_SODGM RecName: Full=Shikimate kinase 2; Short=SK 2
gi|84779132|dbj|BAE73909.1| shikimate kinase II [Sodalis glossinidius str. 'morsitans']
Length = 174
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 79/156 (50%), Gaps = 8/156 (5%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+F+VG KT +G+ LA L Y + D+D +++ + G++ A+ + G++ E+E
Sbjct: 5 LFMVGARGCGKTTVGQALARVLGYAFADTDDMLWRST-GKTVAEIVAKEGWTGFRARESE 63
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMVARMDHSGFPESEVLP 214
+L ++ G VV G G + S+AN +R G +++ ++R + +PE + P
Sbjct: 64 ILTSVTQ-GNAVVATGGGIILSAANRRFMRARGTVVYLHATAQELSRRLRA-YPEDDQRP 121
Query: 215 QLFALYKEMRDGYATADVTVSLQKVASQLGYDDLDA 250
L K M + A+V + +K+ + + LDA
Sbjct: 122 SLTG--KPMIE--EIAEVLAAREKLYQEAAHHVLDA 153
>gi|422011122|ref|ZP_16357983.1| 3-dehydroquinate synthase [Actinomyces georgiae F0490]
gi|394766670|gb|EJF47700.1| 3-dehydroquinate synthase [Actinomyces georgiae F0490]
Length = 532
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 70/134 (52%), Gaps = 7/134 (5%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
V LVGM + K+ +G+ LA AL + D+D+L+ E G +A+ F E E +++ E
Sbjct: 9 VVLVGMPGSGKSRVGRGLAKALGVPHVDTDALIEEEEGA-TASTIFAEQGEVAFREKEAR 67
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLRHGIS-LWIDVP-PGMVARMDHSGF-PESEV 212
+++ M R VV G GAV ++ LLR G+S + IDV +V R G P V
Sbjct: 68 AVERALGM-RAVVSLGGGAVVTARVRELLR-GVSVVHIDVDHEELVRRTAGKGHRPLLRV 125
Query: 213 LPQ-LFALYKEMRD 225
P+ AL + RD
Sbjct: 126 DPEGALALLRHQRD 139
>gi|374579552|ref|ZP_09652646.1| shikimate kinase [Desulfosporosinus youngiae DSM 17734]
gi|374415634|gb|EHQ88069.1| shikimate kinase [Desulfosporosinus youngiae DSM 17734]
Length = 177
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 73/148 (49%), Gaps = 5/148 (3%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L+G K+ +GK LA +L + + D+D + E S ++ FR E ++ E+
Sbjct: 3 NIVLIGFMGTGKSTVGKRLAQSLAWDFVDTDYEIGEVTS-MSVSEIFRRHGETRFRSEES 61
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANL-ALLRHGISLWIDVP-PGMVARMDHSGFPESEV 212
V+ +LS RLV+ G G V + AN AL ++GI + + ++AR+ H
Sbjct: 62 IVVTRLSQQERLVIATGGGTVLNPANWNALAQNGIVIALHASLEAILARIGHKNDRPLLK 121
Query: 213 LPQ--LFALYKEMRDGYATADVTVSLQK 238
P+ + L+ + + YA AD V K
Sbjct: 122 GPRDVIEKLWSDRQACYAQADYIVDTSK 149
>gi|241206575|ref|YP_002977671.1| shikimate kinase [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240860465|gb|ACS58132.1| Shikimate kinase [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 196
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 7/164 (4%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
L ++ LVG+ A K+ +G+ +A L + DSD L E + A+ F E+ ++
Sbjct: 20 LGSRNLILVGLMGAGKSSVGRIVASQLSIPFIDSD-LEIERVSRMTIAELFAAYGEQEFR 78
Query: 151 QAETEVLKQLSSMGRLVVCAGNGA-VQSSANLALLRHGISLW----IDVPPGMVARMDHS 205
E V+K+L G VV G GA + + + G+S+W +DV VA+ D
Sbjct: 79 ALEARVIKRLLKSGPRVVSTGGGAFINDRTRKHIKKGGLSVWLKADLDVLWDRVAKRDTR 138
Query: 206 GFPESEVLPQ-LFALYKEMRDGYATADVTVSLQKVASQLGYDDL 248
++E Q L L YA AD+TV + V ++ D++
Sbjct: 139 PLLKTENPKQTLEGLMNARYPIYAQADLTVLSRDVRKEIMADEV 182
>gi|168184585|ref|ZP_02619249.1| shikimate kinase [Clostridium botulinum Bf]
gi|237795314|ref|YP_002862866.1| shikimate kinase [Clostridium botulinum Ba4 str. 657]
gi|259585300|sp|C3KXE0.1|AROK_CLOB6 RecName: Full=Shikimate kinase; Short=SK
gi|182672398|gb|EDT84359.1| shikimate kinase [Clostridium botulinum Bf]
gi|229260499|gb|ACQ51532.1| shikimate kinase [Clostridium botulinum Ba4 str. 657]
Length = 170
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L+GM + K+ LG+ ++ L+Y D+D+L+ E G+S + F+ E +++ E
Sbjct: 3 NIVLIGMPLSGKSTLGREISKILKYDLIDTDTLI-EKMEGKSIKEIFKIYGEDYFREKEL 61
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVP-PGMVARMDHSG 206
E++ +L V+ G G + N+ L+ G ++++ VP ++ RM G
Sbjct: 62 EIINKLKKESNKVISTGGGLPIYNKNIYELKKIGFTVYLKVPLEELIKRMVKKG 115
>gi|399073365|ref|ZP_10750413.1| shikimate kinase [Caulobacter sp. AP07]
gi|398041731|gb|EJL34786.1| shikimate kinase [Caulobacter sp. AP07]
Length = 209
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 60/117 (51%), Gaps = 2/117 (1%)
Query: 86 DISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESD 145
D L+ ++ LVG+ K+ +G+ LA AL + D+D+ V EAA G + + F E
Sbjct: 23 DPRAALRLRTIVLVGLMGVGKSSVGRRLATALDLPFRDADNEV-EAAAGRTIPEIFAEMG 81
Query: 146 EKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMVAR 201
E ++ E V+ +L V+ G GA ++ AL++ I++W+ ++AR
Sbjct: 82 EPAFRDGERRVIARLLDEPPHVLATGGGAFANAETRALIKDKAIAVWLKADLELLAR 138
>gi|359792561|ref|ZP_09295361.1| hypothetical protein MAXJ12_23817 [Mesorhizobium alhagi CCNWXJ12-2]
gi|359251254|gb|EHK54641.1| hypothetical protein MAXJ12_23817 [Mesorhizobium alhagi CCNWXJ12-2]
Length = 2744
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 77/165 (46%), Gaps = 19/165 (11%)
Query: 87 ISTELKGT----SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFR 142
I+TE+ G SV LVGM A K+ LG+ LA L + DSD + EA G+S AK
Sbjct: 2556 IATEILGALGARSVVLVGMTGAGKSSLGRALAKRLGIKFVDSDREI-EAKTGKSIAKIVA 2614
Query: 143 ESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-----GISLWIDVPPG 197
E E ++ E ++Q G V+ G A + +RH +S+W++
Sbjct: 2615 EDGEAHFRNLEVNEIRQSLEQGPAVLATGGEAFM----IEEIRHHVGEKAVSIWLNTNED 2670
Query: 198 MVAR-MDHS-GFPESEVLPQLFALYKEMR---DGYATADVTVSLQ 237
++ R M H+ P+ + Q + MR Y AD+T++ Q
Sbjct: 2671 VIRRNMRHNTKGPKVQTADQDQTITDLMRVRNPIYTLADLTIAPQ 2715
>gi|187925570|ref|YP_001897212.1| shikimate kinase [Burkholderia phytofirmans PsJN]
gi|187716764|gb|ACD17988.1| Shikimate kinase [Burkholderia phytofirmans PsJN]
Length = 183
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+VF VG+ A KT +G+ +A L +FDSD + EA G F E G+++ E
Sbjct: 9 NVFFVGLMGAGKTTVGRAIARRLDRPFFDSDHEI-EARTGARIPVIFELEGEAGFREREA 67
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANL-ALLRHGISLWIDVPP 196
V+ L+ +V+ G GA+ N AL G+ +++ P
Sbjct: 68 SVISDLTGRDSIVLATGGGAILRPENREALQNRGVVIYLRANP 110
>gi|121603589|ref|YP_980918.1| shikimate kinase [Polaromonas naphthalenivorans CJ2]
gi|120592558|gb|ABM35997.1| shikimate kinase [Polaromonas naphthalenivorans CJ2]
Length = 182
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 6/146 (4%)
Query: 88 STELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEK 147
S++++ SV LVG+ + K+ +G+ LA L+ + DSD ++ E G S F E
Sbjct: 3 SSQIRLPSVALVGLPGSGKSTIGRQLARRLKLSFLDSDHVIEERLGC-SIRDYFEREGEA 61
Query: 148 GYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALL--RHGISLWIDVPPGMVARMDHS 205
++ E V+ +L+ M V+ G G+V AN L R + P + R+ H
Sbjct: 62 SFRDVEEAVIDELTGMASGVLSTGGGSVLRPANRQRLHERGHVVYLRSSPEELFRRLRHD 121
Query: 206 GFPESEVLPQLFALYKEMRDGYATAD 231
S L Q+ +RD YA D
Sbjct: 122 ---VSRPLLQVADPLGRLRDLYAQRD 144
>gi|300113066|ref|YP_003759641.1| shikimate kinase [Nitrosococcus watsonii C-113]
gi|299539003|gb|ADJ27320.1| Shikimate kinase [Nitrosococcus watsonii C-113]
Length = 189
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG + KT +G++LA ++DSD + E+ G S F E G++Q E
Sbjct: 5 NIFLVGPMGSGKTTIGRYLARITGKKFYDSDREI-ESRTGVSIPVIFEIEGESGFRQREC 63
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSAN-LALLRHGISLWIDVPPGMVAR 201
+++ +L + +V+ G GAV ++ N L + G +++ P + R
Sbjct: 64 KIIAELVQLSNIVLATGGGAVLAAENRRELSQRGTVVYLYASPRQLYR 111
>gi|419802103|ref|ZP_14327304.1| shikimate kinase 1 [Haemophilus parainfluenzae HK262]
gi|385191425|gb|EIF38839.1| shikimate kinase 1 [Haemophilus parainfluenzae HK262]
Length = 180
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 57/100 (57%), Gaps = 2/100 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L + DSD+++ E AG + + F E+G+++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRQLAQQLNMDFVDSDAVIEERAGAD-ISWIFDLEGEEGFRKREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
++ +L+ + +V+ G GAV S + L GI ++++
Sbjct: 65 RIINELTQLQGVVLSTGGGAVMSKESRNYLSARGIVIYLE 104
>gi|15607112|ref|NP_214494.1| shikimate kinase [Aquifex aeolicus VF5]
gi|7673950|sp|O67925.1|AROK_AQUAE RecName: Full=Shikimate kinase; Short=SK
gi|2984356|gb|AAC07875.1| shikimate kinase [Aquifex aeolicus VF5]
Length = 168
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
++L+G + K+ +G L+ +L ++D D V + G S + F + E +++ E E
Sbjct: 3 IYLIGFMCSGKSTVGSLLSRSLNIPFYDVDEEV-QKREGLSIPQIFEKKGEAYFRKLEFE 61
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVP-PGMVARMDHSGFPESEVL 213
VLK LS +V+ G G + L ++ G +++ID+P + R S E +L
Sbjct: 62 VLKDLSEKENVVISTGGGLGANEEALNFMKSRGTTVFIDIPFEVFLERCKDS--KERPLL 119
Query: 214 P----QLFALYKEMRDGYATADVTVSLQK 238
++ L++E R Y+ AD+ V +K
Sbjct: 120 KRPLDEIKNLFEERRKIYSKADIKVKGEK 148
>gi|269837146|ref|YP_003319374.1| 3-dehydroquinate synthase [Sphaerobacter thermophilus DSM 20745]
gi|269786409|gb|ACZ38552.1| 3-dehydroquinate synthase [Sphaerobacter thermophilus DSM 20745]
Length = 548
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 71/151 (47%), Gaps = 13/151 (8%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
V+L+G++ + KT L LA+ L + D D+ V E G S F E ++ AE +
Sbjct: 6 VYLIGLSGSGKTTLAPLLAERLGFEAVDIDAEV-ERHFGRSIPDIFAAFGEPVFRAAERD 64
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALL--RHGISLWIDVPPGMVARMDHS--GFPESE 211
L Q S R+VV G GAV AN A + R I P ++ R++ + P +E
Sbjct: 65 ALAQASRRTRVVVATGGGAVLDPANWASMRPRSAIVHLTAAPSVLIERLEAAVRATPMAE 124
Query: 212 --------VLPQLFALYKEMRDGYATADVTV 234
L +L +L++ R Y AD+T+
Sbjct: 125 RPLLRGDDPLARLESLWQARRHLYEQADLTI 155
>gi|299132833|ref|ZP_07026028.1| Shikimate kinase [Afipia sp. 1NLS2]
gi|298592970|gb|EFI53170.1| Shikimate kinase [Afipia sp. 1NLS2]
Length = 204
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 1/113 (0%)
Query: 81 KKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKA 140
+ + ADI + L ++ VGM + K+ +G+ LA LR + D+D + GG + +
Sbjct: 12 QNQIADILSALGPRAIVFVGMMGSGKSTVGRRLAARLRLPFVDADHEIETRHGGMTITEI 71
Query: 141 FRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWI 192
F E +++ E +V+ L G V+ G GA A +R +S+W+
Sbjct: 72 FANHGEPYFREGEAKVISALLDGGAQVLATGGGAFLREDTRARIRDKAVSIWL 124
>gi|291612585|ref|YP_003522742.1| 3-dehydroquinate synthase [Sideroxydans lithotrophicus ES-1]
gi|291582697|gb|ADE10355.1| 3-dehydroquinate synthase [Sideroxydans lithotrophicus ES-1]
Length = 546
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
Query: 88 STELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEK 147
+T+ + ++ LVGM A KT +GK LA L + DSD + + G + F E
Sbjct: 4 TTDKRTCNIILVGMMGAGKTTVGKLLAKQLGKTFIDSDEEI-QRRTGVTIPHIFDVEGEA 62
Query: 148 GYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWI 192
G++ E+ V+++L +V+ G GA+ S+ N L++ +G+ +++
Sbjct: 63 GFRVRESGVIQELLKQDDIVLATGGGAILSAQNRPLMKQNGVVVYL 108
>gi|21672785|ref|NP_660852.1| shikimate kinase I [Buchnera aphidicola str. Sg (Schizaphis
graminum)]
gi|25008147|sp|Q8K938.1|AROK_BUCAP RecName: Full=Shikimate kinase; Short=SK
gi|21623433|gb|AAM68063.1| shikimate kinase [Buchnera aphidicola str. Sg (Schizaphis
graminum)]
Length = 173
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FL+G A K+ +G+ L+ L +FDSD + E G + + F E G++Q E
Sbjct: 6 NIFLIGPMGAGKSTIGRQLSQQLNMEFFDSDQEI-EKRTGANISWVFDVEGEHGFRQREV 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
+V+ +L+ +V+ G G+V+ N +L GI ++++
Sbjct: 65 KVIDELTKKQGIVLATGGGSVKFKENRNILSARGIVIYLE 104
>gi|260774709|ref|ZP_05883613.1| shikimate kinase I [Vibrio coralliilyticus ATCC BAA-450]
gi|260609365|gb|EEX35516.1| shikimate kinase I [Vibrio coralliilyticus ATCC BAA-450]
Length = 172
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L + DSD+++ E G + A F E+G++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRHLAQQLHMEFVDSDTVIEERTGAD-IAWVFDVEGEEGFRVREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
V+ L+ +V+ G G+++S N L GI ++++
Sbjct: 65 RVINDLTEEHGIVLATGGGSIKSKENRNRLSARGIVVYLE 104
>gi|257792287|ref|YP_003182893.1| shikimate kinase [Eggerthella lenta DSM 2243]
gi|257476184|gb|ACV56504.1| Shikimate kinase [Eggerthella lenta DSM 2243]
Length = 189
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 2/100 (2%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
VF VG A KT + + LA D D+ E G+ + F ++ E G++ ET+
Sbjct: 19 VFFVGFMGAGKTSVARRLARTCGVASVDMDTY-LERREGKRVKEIFAQAGEDGFRAIETD 77
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDV 194
VL++L+ L+V G G V+ N A+LR G +++ V
Sbjct: 78 VLRELAGKEPLLVSCGGGVVKRDENRAILRDAGFVVYLKV 117
>gi|374293291|ref|YP_005040326.1| shikimate kinase [Azospirillum lipoferum 4B]
gi|357425230|emb|CBS88116.1| Shikimate kinase [Azospirillum lipoferum 4B]
Length = 224
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 77/162 (47%), Gaps = 16/162 (9%)
Query: 84 AADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRE 143
AA+ L +V LVG+ A K+ +G+ LA L + D+D+ + EAA G + A+ F
Sbjct: 21 AAEDKAPLLPRTVVLVGLMGAGKSAIGRRLATRLHLPFRDADTEI-EAAAGCTIAEIFAR 79
Query: 144 SDEKGYQQAETEVLKQLSSMGRLVVCA-GNGAVQSSANLALLR-HGISLW----IDVPPG 197
E ++ E ++ +L + + + A G GA A +R HGIS+W +DV
Sbjct: 80 DGEPVFRSVERRIITRLLTDEPVHILATGGGAFMDPDTRAAIRQHGISVWLRAELDVLVA 139
Query: 198 MVARMDH-----SGFPESEVLPQLFALYKEMRDGYATADVTV 234
AR H G P + L L ++ YA AD+TV
Sbjct: 140 RTARRTHRPILNQGDPRA----ILGRLMEQRYPVYAEADLTV 177
>gi|261405755|ref|YP_003241996.1| Shikimate kinase [Paenibacillus sp. Y412MC10]
gi|261282218|gb|ACX64189.1| Shikimate kinase [Paenibacillus sp. Y412MC10]
Length = 172
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 73/148 (49%), Gaps = 8/148 (5%)
Query: 93 GTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQA 152
G ++ L+GM K+ +G+ +AD+L Y D D+ + E G + ++ F E +++A
Sbjct: 7 GRNIILIGMMGTGKSTVGRLVADSLGYNLIDLDAEI-ERMEGRTISEMFETEGEPYFREA 65
Query: 153 ETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHG---ISLWIDVPPGMVARMDHSG--- 206
E+ L+ + +V+ +G GAV S N +++ G ++L D +V R+
Sbjct: 66 ESAALRSVLLRDGIVLASGGGAVLRSDNCDVMKRGGWVVALTADAAS-IVERVRGDANRP 124
Query: 207 FPESEVLPQLFALYKEMRDGYATADVTV 234
+V ++ + E +D Y ADV V
Sbjct: 125 LLAGDVEERVRRILDERKDKYRFADVMV 152
>gi|153846285|ref|ZP_01993850.1| shikimate kinase [Vibrio parahaemolyticus AQ3810]
gi|308094757|ref|ZP_05891758.2| shikimate kinase [Vibrio parahaemolyticus AN-5034]
gi|149744940|gb|EDM56284.1| shikimate kinase [Vibrio parahaemolyticus AQ3810]
gi|308089681|gb|EFO39376.1| shikimate kinase [Vibrio parahaemolyticus AN-5034]
Length = 186
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L + DSD+++ E G + + F E+G+++ E
Sbjct: 20 NIFLVGPMGAGKSTIGRHLAQQLHMEFVDSDTVIEERTGAD-ISWVFDVEGEEGFRKREE 78
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
VL+ L+ +V+ G G+V+S N L G+ ++++
Sbjct: 79 AVLEDLTQEQGIVLATGGGSVKSKENRNRLSARGVVVYLE 118
>gi|325849493|ref|ZP_08170774.1| shikimate kinase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|325480113|gb|EGC83188.1| shikimate kinase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 495
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 79/153 (51%), Gaps = 9/153 (5%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L+GM + KT LG+ LA+ ++ + D D L FE G + + F+ E ++ E+
Sbjct: 338 NIALIGMPGSGKTSLGRILAENMKRNFIDLD-LEFEKKYG-NIEEFFKNYGEDKFRYKES 395
Query: 155 EVLKQLSSM-GRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVARMDHSGFPESEV- 212
++LK+ S G+++ C G G V+ N L+ S+ ++V + ++ G P S+
Sbjct: 396 QILKEFSKKTGQIISCGG-GIVEKEENYYRLKEN-SIIVNVKRDL-ENLEIEGRPLSKKY 452
Query: 213 -LPQLFALYKEMRDGYATADV-TVSLQKVASQL 243
L L+ K++ D + +V + L K A ++
Sbjct: 453 DLEFLYNKRKDLYDKFKDFEVYNIDLDKCAKEI 485
>gi|429730596|ref|ZP_19265242.1| shikimate kinase [Corynebacterium durum F0235]
gi|429147034|gb|EKX90064.1| shikimate kinase [Corynebacterium durum F0235]
Length = 173
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 4/100 (4%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
V LVG A KT +G+ LA AL + DSD+L+ E G+ + + + E+ +++ E +
Sbjct: 6 VVLVGPPGAGKTTIGRRLARALNTTHVDSDALI-EQDQGKPCGEVYSDLGEEQFRELEAQ 64
Query: 156 VLKQ-LSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDV 194
+ Q L G VV G GAV + + ALL + +W+DV
Sbjct: 65 HVAQALQHDG--VVSLGGGAVVTDSTRALLANHEVVWVDV 102
>gi|116254086|ref|YP_769924.1| shikimate kinase [Rhizobium leguminosarum bv. viciae 3841]
gi|115258734|emb|CAK09840.1| putative shikimate kinase I [Rhizobium leguminosarum bv. viciae
3841]
Length = 185
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 7/164 (4%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
L ++ LVG+ A K+ +G+ +A L + DSD L E + A+ F E+ ++
Sbjct: 9 LGSRNLILVGLMGAGKSSVGRIVASQLAIPFIDSD-LEIERVSRMTIAELFAAYGEQEFR 67
Query: 151 QAETEVLKQLSSMGRLVVCAGNGA-VQSSANLALLRHGISLW----IDVPPGMVARMDHS 205
E V+K+L G VV G GA + + + G+S+W +DV VA+ D
Sbjct: 68 ALEARVIKRLLKSGPRVVSTGGGAFINDRTRKHIRKGGLSVWLKADLDVLWDRVAKRDTR 127
Query: 206 GFPESEVLPQ-LFALYKEMRDGYATADVTVSLQKVASQLGYDDL 248
++E Q L L YA AD+TV + V ++ D++
Sbjct: 128 PLLKTENPKQTLEGLMNARYPIYAQADLTVLSRDVRKEIMADEV 171
>gi|344339879|ref|ZP_08770806.1| Shikimate kinase [Thiocapsa marina 5811]
gi|343800058|gb|EGV18005.1| Shikimate kinase [Thiocapsa marina 5811]
Length = 174
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 75/155 (48%), Gaps = 8/155 (5%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
++ ++F+VG A K+ +G+ LA+ L Y + DSD + + G F E G++
Sbjct: 2 MRAQNIFIVGPMGAGKSTVGRQLAETLSYTFKDSDQEI-QRRTGVDIPTIFEFEGESGFR 60
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLA-LLRHGISLWIDVPP----GMVARMDHS 205
E +V+++L R+V+ G G + S+ N L G+ +++ P AR +
Sbjct: 61 ARERQVIEELVGEERIVLATGGGVILSAENRQDLAARGVVIYLHCSPEQQYARTARDRNR 120
Query: 206 GFPESE-VLPQLFALYKEMRDGY-ATADVTVSLQK 238
++E L +L L +E Y AD+ VS +K
Sbjct: 121 PLLDTEDPLAKLRELMEEREPLYRQVADMVVSTEK 155
>gi|242242810|ref|ZP_04797255.1| shikimate kinase [Staphylococcus epidermidis W23144]
gi|420174697|ref|ZP_14681145.1| putative shikimate kinase [Staphylococcus epidermidis NIHLM061]
gi|420190153|ref|ZP_14696097.1| putative shikimate kinase [Staphylococcus epidermidis NIHLM037]
gi|420192289|ref|ZP_14698149.1| putative shikimate kinase [Staphylococcus epidermidis NIHLM023]
gi|420204455|ref|ZP_14710013.1| putative shikimate kinase [Staphylococcus epidermidis NIHLM015]
gi|242233711|gb|EES36023.1| shikimate kinase [Staphylococcus epidermidis W23144]
gi|394244601|gb|EJD89936.1| putative shikimate kinase [Staphylococcus epidermidis NIHLM061]
gi|394259044|gb|EJE03914.1| putative shikimate kinase [Staphylococcus epidermidis NIHLM037]
gi|394261500|gb|EJE06297.1| putative shikimate kinase [Staphylococcus epidermidis NIHLM023]
gi|394273465|gb|EJE17896.1| putative shikimate kinase [Staphylococcus epidermidis NIHLM015]
Length = 170
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 9/131 (6%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+ LVG KT +GK+L+D Y D D+ + E +S F + EKG++ ET+
Sbjct: 8 IILVGFMGTGKTTVGKYLSDLYNLSYVDLDNFI-EVNECKSIPDIFNDIGEKGFRSLETK 66
Query: 156 VLKQ-LSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMVARM----DHSGFPE 209
LK L++ ++ G G ++ + +L LL+ +W+D ++ + H +
Sbjct: 67 YLKACLNTFD--IISTGGGIIEDTNSLKLLKSQKHVVWLDCDIEIIFKRVKNDPHRPNAK 124
Query: 210 SEVLPQLFALY 220
S+ L QL ALY
Sbjct: 125 SKNLNQLDALY 135
>gi|154252170|ref|YP_001412994.1| shikimate kinase [Parvibaculum lavamentivorans DS-1]
gi|154156120|gb|ABS63337.1| Shikimate kinase [Parvibaculum lavamentivorans DS-1]
Length = 208
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
S+ LVG+ A KT +G+ LA L + D+D+ + E A GE+ + F E ++ E
Sbjct: 28 SIVLVGLMGAGKTTVGRRLARRLDLAFVDADAEI-EQAAGETIPEIFERHGEPAFRAGER 86
Query: 155 EVLKQLSSMGRLVVCAGNGAVQ---SSANLALLRHGISLWI 192
V+ +L V+ G GA + AN+A GIS+W+
Sbjct: 87 RVIARLLGAAPQVLATGGGAFMDPVTRANVAA--RGISIWL 125
>gi|365845092|ref|ZP_09385890.1| shikimate kinase [Flavonifractor plautii ATCC 29863]
gi|373116797|ref|ZP_09530948.1| hypothetical protein HMPREF0995_01784 [Lachnospiraceae bacterium
7_1_58FAA]
gi|364562016|gb|EHM39888.1| shikimate kinase [Flavonifractor plautii ATCC 29863]
gi|371668873|gb|EHO33977.1| hypothetical protein HMPREF0995_01784 [Lachnospiraceae bacterium
7_1_58FAA]
Length = 168
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 54/107 (50%), Gaps = 2/107 (1%)
Query: 94 TSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAE 153
++ L+GM K+ +G+ A+ L + D+D + E A G + + F E+G++ E
Sbjct: 2 NNLILIGMMGCGKSTVGRLAAEKLGLAFVDTDERI-ERASGRTIPEIFASEGEEGFRARE 60
Query: 154 TEVLKQLSSMGRLVVCAGNG-AVQSSANLALLRHGISLWIDVPPGMV 199
+V + L+ G LV+ G G ++ A AL G+ W+ P ++
Sbjct: 61 LDVSRALAREGGLVIACGGGLPTRAEAIAALKASGVVFWLSREPAVI 107
>gi|269961467|ref|ZP_06175831.1| Shikimate kinase [Vibrio harveyi 1DA3]
gi|269833844|gb|EEZ87939.1| Shikimate kinase [Vibrio harveyi 1DA3]
Length = 172
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L + DSD+++ E G + + F E G+++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRHLAQQLHMEFVDSDTVIEERTGAD-ISWVFDVEGEDGFRKREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
VL+ L+ +V+ G G+V+S N L G+ ++++
Sbjct: 65 AVLEDLTQEQGIVLATGGGSVKSKENRNRLSARGVVVYLE 104
>gi|423207729|ref|ZP_17194285.1| shikimate kinase [Aeromonas veronii AMC34]
gi|404620796|gb|EKB17693.1| shikimate kinase [Aeromonas veronii AMC34]
Length = 172
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 78/163 (47%), Gaps = 16/163 (9%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FL+G A K+ +G+ LA+ L +FDSD + E G F E+G++ E
Sbjct: 6 NIFLIGPMGAGKSTIGRHLAEQLHMEFFDSDHEI-ERRSGADIGWVFDVEGEEGFRIREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVP-PGMVARMD--------H 204
+V+ +LS +V+ G GA++S L GI ++++ +AR
Sbjct: 65 KVISELSEQQGIVLATGGGAIKSRETRNKLSARGIVVYLETTIEKQLARTQRDKRRPLLQ 124
Query: 205 SGFPESEVLPQLF----ALYKEMRDGYATADVTVSLQKVASQL 243
+ P EVL +L ALY+E+ D D S + VA+Q+
Sbjct: 125 TEEPPREVLERLAQERNALYEEVADFVIQTD-DQSAKIVANQI 166
>gi|189424650|ref|YP_001951827.1| shikimate kinase [Geobacter lovleyi SZ]
gi|189420909|gb|ACD95307.1| Shikimate kinase [Geobacter lovleyi SZ]
Length = 175
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
S+ L G + KT +G+ LA L Y + D D+L+ E AG +S + F + E +++ ET
Sbjct: 4 SIILTGPMGSGKTSVGQLLAARLGYRFQDLDALLVEQAG-KSINQIFADEGEAAFRERET 62
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRHG---ISLWIDVP 195
+L L +++ G G V AN LL G ++L VP
Sbjct: 63 ALLATLVGQHGIILSTGGGVVIREANRRLLHAGGLVVNLTATVP 106
>gi|417841309|ref|ZP_12487413.1| Shikimate kinase [Haemophilus haemolyticus M19501]
gi|341949347|gb|EGT75951.1| Shikimate kinase [Haemophilus haemolyticus M19501]
Length = 180
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L + DSD+++ E G + + F E+G+++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRQLAQQLNMDFIDSDAVIEERTGAD-ISWIFDLEGEEGFRKREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
++ +L+ M +V+ G GAV S + L GI ++++
Sbjct: 65 RIINELTQMQGIVLSTGGGAVLSKESRNYLSARGIVIYLE 104
>gi|420238806|ref|ZP_14743181.1| shikimate kinase [Rhizobium sp. CF080]
gi|398084652|gb|EJL75328.1| shikimate kinase [Rhizobium sp. CF080]
Length = 202
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 79/170 (46%), Gaps = 12/170 (7%)
Query: 76 PSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGE 135
P+ + K +A L ++ VG+ A K+ +G+ +A L + D+D+ + E
Sbjct: 10 PALSEKARAV-----LGKRNLIFVGLMGAGKSAIGRLVAQTLSIPFIDTDAEI-EKVSRM 63
Query: 136 SAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGA-VQSSANLALLRHGISLW--- 191
S ++ F E ++ ET V+++L G VV G GA + + + GIS+W
Sbjct: 64 SISELFAAYGETEFRALETRVIERLLRGGPRVVSTGGGAFINENTRHQIKIGGISIWLKA 123
Query: 192 -IDVPPGMVARMDHSGFPESEVLPQ-LFALYKEMRDGYATADVTVSLQKV 239
+DV V + DH ++E Q L L + YA AD+TV Q V
Sbjct: 124 DLDVLWERVNKRDHRPLLKTENPKQTLENLMTQRYPIYAEADLTVQSQNV 173
>gi|342903898|ref|ZP_08725700.1| Shikimate kinase [Haemophilus haemolyticus M21621]
gi|373466857|ref|ZP_09558166.1| shikimate kinase [Haemophilus sp. oral taxon 851 str. F0397]
gi|417839138|ref|ZP_12485341.1| Shikimate kinase [Haemophilus haemolyticus M19107]
gi|417843151|ref|ZP_12489228.1| Shikimate kinase [Haemophilus haemolyticus M21127]
gi|341950385|gb|EGT76974.1| Shikimate kinase [Haemophilus haemolyticus M21127]
gi|341953907|gb|EGT80401.1| Shikimate kinase [Haemophilus haemolyticus M21621]
gi|341954854|gb|EGT81325.1| Shikimate kinase [Haemophilus haemolyticus M19107]
gi|371759621|gb|EHO48333.1| shikimate kinase [Haemophilus sp. oral taxon 851 str. F0397]
Length = 180
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L + DSD+++ E G + + F E+G+++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRQLAQQLNMDFIDSDAVIEERTGAD-ISWIFDLEGEEGFRKREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
++ +L+ M +V+ G GAV S + L GI ++++
Sbjct: 65 RIINELTQMQGIVLSTGGGAVLSKESRNYLSARGIVIYLE 104
>gi|325833620|ref|ZP_08166069.1| shikimate kinase [Eggerthella sp. HGA1]
gi|325485544|gb|EGC88013.1| shikimate kinase [Eggerthella sp. HGA1]
Length = 179
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 2/100 (2%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
VF VG A KT + + LA D D+ E G+ + F ++ E G++ ET+
Sbjct: 9 VFFVGFMGAGKTSVARRLARTCGVASVDMDTY-LERREGKRVKEIFAQAGEDGFRAIETD 67
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDV 194
VL++L+ L+V G G V+ N A+LR G +++ V
Sbjct: 68 VLRELAGKEPLLVSCGGGVVKRDENRAILRDAGFVVYLKV 107
>gi|149184269|ref|ZP_01862587.1| shikimate kinase [Erythrobacter sp. SD-21]
gi|148831589|gb|EDL50022.1| shikimate kinase [Erythrobacter sp. SD-21]
Length = 189
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+ LVG+ K+ +G+ LA AL + D+D + E A S A+ F E ++ E
Sbjct: 24 LVLVGLMGVGKSTIGRRLATALERDFVDADEEI-ERAANRSVAEIFEAHGEAYFRDGERR 82
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLAL-LRHGISLWIDV 194
V+ +L G V+ G GA AL L G+++W+D
Sbjct: 83 VIARLMEEGHGVIATGGGAFVDDETRALVLEQGLAIWLDC 122
>gi|126729517|ref|ZP_01745330.1| shikimate kinase [Sagittula stellata E-37]
gi|126709636|gb|EBA08689.1| shikimate kinase [Sagittula stellata E-37]
Length = 190
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 80/165 (48%), Gaps = 14/165 (8%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
L+ T VF VGM A KT +GK LA L + DSD + E A + A+ F E ++
Sbjct: 12 LRKTVVF-VGMMGAGKTAVGKTLASRLGVKFRDSDHEI-EVAAQMNIAEIFARDGEDFFR 69
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVPPGMV-ARMDHSG-- 206
+ E++++ +L V+ G GA S AN ++ G+S+W++ ++ R+ H
Sbjct: 70 RKESQIIGRLLDGAPGVLSTGGGAFMSEANRKMISELGVSVWLNADLELLWERVRHKDTR 129
Query: 207 --FPESEVLPQLFALYKEMRDGYATADVTV------SLQKVASQL 243
++ L LY YA AD+ V SL K+A+++
Sbjct: 130 PLLKTADPKGTLRGLYDRRVPIYALADLAVRSEPGMSLDKMAARV 174
>gi|395646778|ref|ZP_10434638.1| Shikimate kinase [Methanofollis liminatans DSM 4140]
gi|395443518|gb|EJG08275.1| Shikimate kinase [Methanofollis liminatans DSM 4140]
Length = 449
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
V L G KT +G+ LA L + D+D+ + E G S F + E+G++ E E
Sbjct: 3 VVLTGYRGTGKTTVGRLLARRLGLPFIDTDAEI-ERLAGASIPAIFASAGEEGFRTLERE 61
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLRHG 187
V+ LS + V+ AG GAV AN+A R G
Sbjct: 62 VIAGLSDV-EGVISAGGGAVLDPANVAAFRKG 92
>gi|197104210|ref|YP_002129587.1| shikimate kinase [Phenylobacterium zucineum HLK1]
gi|196477630|gb|ACG77158.1| shikimate kinase [Phenylobacterium zucineum HLK1]
Length = 187
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 7/164 (4%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
L+ ++ LVG+ K+ +G+ LA AL + D+DS V EAA G S + F + E ++
Sbjct: 12 LRRRTIALVGLMGVGKSSVGRRLASALGLPFRDADSEV-EAAAGRSISDIFADLGEAAFR 70
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLW----IDVPPGMVARMDHS 205
E V+ +L V+ G GA ++ L++ IS+W ++ V R D
Sbjct: 71 DGERRVIARLLDQPPHVLATGGGAFMNAETRQLIKSKAISVWLKTDLETLARRVGRKDTR 130
Query: 206 GFPESEVLPQLFALYKEMR-DGYATADVTVSLQKVASQLGYDDL 248
+ ++ E+R YA AD+TV VA + D +
Sbjct: 131 PLLAGKDPLEVLRAQAEVRYPVYAEADMTVETGDVAHHVTVDQV 174
>gi|322515016|ref|ZP_08068026.1| shikimate kinase [Actinobacillus ureae ATCC 25976]
gi|407692817|ref|YP_006817606.1| shikimate kinase [Actinobacillus suis H91-0380]
gi|322119005|gb|EFX91177.1| shikimate kinase [Actinobacillus ureae ATCC 25976]
gi|407388874|gb|AFU19367.1| shikimate kinase [Actinobacillus suis H91-0380]
Length = 173
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L + DSDS++ E AG + F E G+++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRQLAQMLNMDFIDSDSVIEERAGAD-IDWIFDVEGEAGFRKREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
++ +L+ +V+ G G+V S N +L GI ++++
Sbjct: 65 RIINELTQNQGVVLSTGGGSVLSKDNRNVLSARGIVIYLE 104
>gi|317490208|ref|ZP_07948696.1| shikimate kinase [Eggerthella sp. 1_3_56FAA]
gi|316910702|gb|EFV32323.1| shikimate kinase [Eggerthella sp. 1_3_56FAA]
Length = 179
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 2/100 (2%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
VF VG A KT + + LA D D+ E G+ + F ++ E G++ ET+
Sbjct: 9 VFFVGFMGAGKTSVARRLARTCGVASVDMDTY-LERREGKRVKEIFAQAGEDGFRAIETD 67
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDV 194
VL++L+ L+V G G V+ N A+LR G +++ V
Sbjct: 68 VLRELAGKEPLLVSCGGGVVKRDENRAILRDAGFVVYLKV 107
>gi|328955588|ref|YP_004372921.1| shikimate kinase [Coriobacterium glomerans PW2]
gi|328455912|gb|AEB07106.1| shikimate kinase [Coriobacterium glomerans PW2]
Length = 177
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 2/99 (2%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+F +G + K+ L + L + D+D L E G S AK F+ E+ ++ ET+
Sbjct: 12 IFFIGFLGSGKSTLARNLGRMFGRRFVDTDRLA-EKRAGRSVAKIFQTKGERAFRILETD 70
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWID 193
VL+ L L+V G G V++ N+ L+ G +++D
Sbjct: 71 VLRSLERERSLLVSCGGGIVETPKNIELMHEMGYCVFLD 109
>gi|375109424|ref|ZP_09755672.1| shikimate kinase I [Alishewanella jeotgali KCTC 22429]
gi|397170984|ref|ZP_10494394.1| shikimate kinase I [Alishewanella aestuarii B11]
gi|374570514|gb|EHR41649.1| shikimate kinase I [Alishewanella jeotgali KCTC 22429]
gi|396087458|gb|EJI85058.1| shikimate kinase I [Alishewanella aestuarii B11]
Length = 172
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA+ L ++DSD + E G A F E+G++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRHLAEMLHLEFYDSDQEI-ERRTGADIAWVFDLEGEEGFRVREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVP 195
V++ L+ + +V+ G G+V S L GI ++++ P
Sbjct: 65 NVIQDLTELQGIVLATGGGSVLSKETRNRLSARGIVVYLETP 106
>gi|188996471|ref|YP_001930722.1| Shikimate kinase [Sulfurihydrogenibium sp. YO3AOP1]
gi|254806783|sp|B2V895.1|AROK_SULSY RecName: Full=Shikimate kinase; Short=SK
gi|188931538|gb|ACD66168.1| Shikimate kinase [Sulfurihydrogenibium sp. YO3AOP1]
Length = 166
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 73/148 (49%), Gaps = 5/148 (3%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+++LVG + K+ +GK LA+ L + D D L+ E G F + E +++ E
Sbjct: 3 NIYLVGFMGSGKSTVGKILAEKLNMKFVDIDKLI-EEKEGMKIKDIFEQKGESYFRELER 61
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALL-RHGISLWIDVPPGMV---ARMDHSGFPES 210
+ ++ + + LVV G G + N+ L+ ++G +W+DV V + D
Sbjct: 62 KQIEAIVNQEGLVVSTGGGLGANLNNMNLMKKNGDVVWLDVSLNTVLDRLKNDQDRPLLK 121
Query: 211 EVLPQLFALYKEMRDGYATADVTVSLQK 238
+ + ++ L++E ++ Y A++ ++ K
Sbjct: 122 QPIEKIKQLFEERKNVYRLANIRINADK 149
>gi|227549185|ref|ZP_03979234.1| shikimate kinase [Corynebacterium lipophiloflavum DSM 44291]
gi|227078745|gb|EEI16708.1| shikimate kinase [Corynebacterium lipophiloflavum DSM 44291]
Length = 164
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+ LVG A K+ +G+ LA AL DSD L+ E G++ + + E EK +++ E
Sbjct: 1 MVLVGPPGAGKSTIGRRLASALNLPLVDSDELI-EQGEGKACGEVYLEHGEKSFRELEAG 59
Query: 156 -VLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDV 194
V L++ G VV G GAV + A LL+ +WIDV
Sbjct: 60 YVATALATGG--VVSLGGGAVLNDATRTLLKAHTVVWIDV 97
>gi|224541509|ref|ZP_03682048.1| hypothetical protein CATMIT_00679 [Catenibacterium mitsuokai DSM
15897]
gi|224525546|gb|EEF94651.1| shikimate kinase [Catenibacterium mitsuokai DSM 15897]
Length = 169
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 77/157 (49%), Gaps = 10/157 (6%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L+G+ + KT G L+ + D D + S F S E ++ ET
Sbjct: 3 NIVLIGIMGSGKTTFGHMLSQKTGHEMIDLDDYLVNRFN-MSIPDMFAIS-EDYFRNNET 60
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALL-RHGISLWIDVP-PGMVARMDHSGFPESEV 212
K++S + ++ G G ++ N+A L ++G+ +ID P +V +D SG P +
Sbjct: 61 TCCKEVSELEGKIISTGGGVIKRPENIAYLKKNGVVFYIDRPIEDIVKDVDPSGRPLLKD 120
Query: 213 LP-QLFALYKEMRDGY-ATADVTV----SLQKVASQL 243
P +L+AL KE RD Y ++ D + SL+KV + +
Sbjct: 121 GPDKLYALDKERRDKYMSSCDYHIINDGSLEKVINPI 157
>gi|190893663|ref|YP_001980205.1| shikimate kinase [Rhizobium etli CIAT 652]
gi|417109911|ref|ZP_11963454.1| shikimate kinase [Rhizobium etli CNPAF512]
gi|190698942|gb|ACE93027.1| shikimate kinase protein [Rhizobium etli CIAT 652]
gi|327188711|gb|EGE55910.1| shikimate kinase [Rhizobium etli CNPAF512]
Length = 196
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 76/164 (46%), Gaps = 7/164 (4%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
L ++ LVG+ A K+ +G+ +A L + DSD + E + A+ F E ++
Sbjct: 20 LGSRNLILVGLMGAGKSSVGRIVASQLGIPFIDSDHEI-ERVSRMTIAELFAAYGEDEFR 78
Query: 151 QAETEVLKQLSSMGRLVVCAGNGA-VQSSANLALLRHGISLW----IDVPPGMVARMDHS 205
ET V+K+L G VV G GA V + R G+S+W +DV V + D
Sbjct: 79 ALETRVIKRLLKSGPRVVSTGGGAFVNERTRRHIKRGGLSVWLKADLDVLWERVNKRDTR 138
Query: 206 GFPESEVLPQ-LFALYKEMRDGYATADVTVSLQKVASQLGYDDL 248
++E Q L L YA AD+TV + V ++ D++
Sbjct: 139 PLLKTENPKQTLENLMNARYPIYAQADLTVLSRDVRKEIMADEV 182
>gi|89075208|ref|ZP_01161639.1| shikimate kinase I [Photobacterium sp. SKA34]
gi|89049030|gb|EAR54597.1| shikimate kinase I [Photobacterium sp. SKA34]
Length = 172
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L +FDSD+++ E G + + F E G++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRHLAQQLHMEFFDSDTVIEERTGAD-ISWVFDVEGEDGFRVREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
V+ L+ +V+ G G+V++ N L GI ++++
Sbjct: 65 TVIDDLTQEQGIVLATGGGSVKTKENRNRLSARGIVVYLE 104
>gi|444376815|ref|ZP_21176053.1| Shikimate kinase I [Enterovibrio sp. AK16]
gi|443678940|gb|ELT85602.1| Shikimate kinase I [Enterovibrio sp. AK16]
Length = 184
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L +FDSD+++ E G + A F E+G++ E
Sbjct: 18 NIFLVGPMGAGKSTIGRHLAQQLHMEFFDSDTVIEERTGAD-IAWVFDVEGEEGFRVREE 76
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
V+ L+ +V+ G G+++S + L GI ++++
Sbjct: 77 NVINDLTEKQGIVLATGGGSIKSRESRNRLSARGIVVYLE 116
>gi|302344636|ref|YP_003809165.1| shikimate kinase., 3-dehydroquinate synthase [Desulfarculus baarsii
DSM 2075]
gi|301641249|gb|ADK86571.1| Shikimate kinase., 3-dehydroquinate synthase [Desulfarculus baarsii
DSM 2075]
Length = 520
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 7/154 (4%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FL G + K+ +G LA A+ + D DS + G + A+ F + E ++QAE+
Sbjct: 4 NIFLTGFMGSGKSTVGALLARAMGRKFVDMDSELTRHFG-QPIAEVFAQRGEAAFRQAES 62
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR--HGISLWIDVPPGMVAR----MDHSGFP 208
+L +LS LV G G + AN AL+R G +W+ AR ++ + P
Sbjct: 63 ALLARLSRRRGLVAATGGGVAANPANRALMRADGGRIVWLRAGLEHCARRLGPLETAARP 122
Query: 209 ESEVLPQLFALYKEMRDGYATADVTVSLQKVASQ 242
+ L+ + ++ YA D V + + Q
Sbjct: 123 LWRDAAAVERLFAQRQEAYADCDHAVDTEGLLPQ 156
>gi|296188518|ref|ZP_06856906.1| shikimate kinase [Clostridium carboxidivorans P7]
gi|296046782|gb|EFG86228.1| shikimate kinase [Clostridium carboxidivorans P7]
Length = 164
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 73/141 (51%), Gaps = 12/141 (8%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L+GM + KT +GK L + LR + D D + E G++ F+ E +++ E
Sbjct: 5 NIVLIGMPGSGKTTIGKILYEKLRTDFIDMDDYI-EDREGKTIPDIFKNG-EDYFRKLEK 62
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLA-LLRHGISLWIDVPPGMVAR--------MDHS 205
E + ++S+ ++ G G +++ +N+ L ++GI ++ID P +A+ +
Sbjct: 63 EAVCEVSTKKSAIISTGGGVIKNFSNIENLKKNGIVIFIDRPVENIAQDINVLSRPLLKD 122
Query: 206 GFPE-SEVLPQLFALYKEMRD 225
G + E+L + + LYK+ D
Sbjct: 123 GVGKLYELLDERYELYKKYSD 143
>gi|424872594|ref|ZP_18296256.1| shikimate kinase [Rhizobium leguminosarum bv. viciae WSM1455]
gi|393168295|gb|EJC68342.1| shikimate kinase [Rhizobium leguminosarum bv. viciae WSM1455]
Length = 196
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 7/164 (4%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
L ++ LVG+ A K+ +G+ +A L + DSD L E + A+ F E+ ++
Sbjct: 20 LGSRNLILVGLMGAGKSSVGRIVASQLAIPFIDSD-LEIERVSRMTIAELFAAYGEQEFR 78
Query: 151 QAETEVLKQLSSMGRLVVCAGNGA-VQSSANLALLRHGISLW----IDVPPGMVARMDHS 205
E V+K+L G VV G GA + + + G+S+W +DV VA+ D
Sbjct: 79 ALEARVIKRLLKSGPRVVSTGGGAFINDRTRKHIKKGGLSVWLKADLDVLWDRVAKRDTR 138
Query: 206 GFPESEVLPQ-LFALYKEMRDGYATADVTVSLQKVASQLGYDDL 248
++E Q L L YA AD+TV + V ++ D++
Sbjct: 139 PLLKTENPKQTLEGLMNARYPIYAQADLTVLSRDVRKEIMADEV 182
>gi|260433973|ref|ZP_05787944.1| shikimate kinase [Silicibacter lacuscaerulensis ITI-1157]
gi|260417801|gb|EEX11060.1| shikimate kinase [Silicibacter lacuscaerulensis ITI-1157]
Length = 195
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+V +VGM A KT +G+ LA L + DSD+ + E+A + + F E ++ E+
Sbjct: 22 TVVMVGMMGAGKTAVGRALAARLGVPFLDSDAEI-ESAANMTIPEIFERDGEAFFRAKES 80
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALL-RHGISLWI 192
+V+ +L + ++ G GA S AN ++ G+S+W+
Sbjct: 81 QVIGRLLDEQKGILSTGGGAFLSEANRRMISERGVSVWL 119
>gi|402835195|ref|ZP_10883774.1| shikimate kinase [Selenomonas sp. CM52]
gi|402275986|gb|EJU25116.1| shikimate kinase [Selenomonas sp. CM52]
Length = 176
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 9/117 (7%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+V L+G KT G+ LA L + D D ++ E AG S + F E ++ E
Sbjct: 3 NVVLIGFMGTGKTSTGRALAQRLGRAFVDLDRMIEEEAG-RSIPEIFASEGEAAFRALER 61
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLW-----IDVPPGMVARMDHSG 206
E +++ + LV+ G G V+ +AN+ALL+ +L +DV ++AR H G
Sbjct: 62 EAVRRTAKRRALVISTGGGTVKDAANVALLKENGALICLTASVDV---VLARTAHVG 115
>gi|428178767|gb|EKX47641.1| hypothetical protein GUITHDRAFT_137405 [Guillardia theta CCMP2712]
Length = 248
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 82/183 (44%), Gaps = 12/183 (6%)
Query: 83 KAADISTELKGTSVFLVGMNNAIKTHLGKFLADALR-YYYFDSDSLVFEAAGG---ESAA 138
KAA+ T L+ S++LVG+ +G +A Y Y + + ++ A+G ES+
Sbjct: 63 KAAECKTILQQRSIYLVGLPAIGIEQIGSLIARRFENYRYLNMNDVIASASGQGEVESSK 122
Query: 139 KAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGM 198
+ + E+ +++ E VL QL ++ R V+ G V +N + GI ++++
Sbjct: 123 ELISKMGEEAFREVEEAVLDQLQALLRSVISTDAGVVLRPSNWGKMNQGIVVYVEADIDK 182
Query: 199 VARMDHSGFPESEVLPQLFALYKEMRDGYATADVTVSLQKVASQLGYDDLDAVTTEDMTL 258
+A E L + A EM + ADV V K+ D++ E MT
Sbjct: 183 LAA--QQSIWSKEELQDIQARCSEM---FKQADVKV---KIDVGNAADNIAVSIIESMTR 234
Query: 259 EVK 261
E+K
Sbjct: 235 ELK 237
>gi|218510607|ref|ZP_03508485.1| shikimate kinase [Rhizobium etli Brasil 5]
Length = 241
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 76/164 (46%), Gaps = 7/164 (4%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
L ++ LVG+ A K+ +G+ +A L + DSD + E + A+ F E ++
Sbjct: 65 LGSRNLILVGLMGAGKSSVGRIVASQLGIPFIDSDHEI-ERVSRMTIAELFAAYGEDEFR 123
Query: 151 QAETEVLKQLSSMGRLVVCAGNGA-VQSSANLALLRHGISLW----IDVPPGMVARMDHS 205
ET V+K+L G VV G GA V + R G+S+W +DV V + D
Sbjct: 124 ALETRVIKRLLKSGPRVVSTGGGAFVNERTRRHIKRGGLSVWLKADLDVLWERVNKRDTR 183
Query: 206 GFPESEVLPQ-LFALYKEMRDGYATADVTVSLQKVASQLGYDDL 248
++E Q L L YA AD+TV + V ++ D++
Sbjct: 184 PLLKTENPKQTLENLMNARYPIYAQADLTVLSRDVRKEIMADEV 227
>gi|429735842|ref|ZP_19269765.1| shikimate kinase [Selenomonas sp. oral taxon 138 str. F0429]
gi|429156766|gb|EKX99387.1| shikimate kinase [Selenomonas sp. oral taxon 138 str. F0429]
Length = 173
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 14/151 (9%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+V L+G KT +G+ LA L + D D + E G S FRE E ++ E
Sbjct: 3 NVVLIGFMGTGKTSVGRLLAARLGCAFHDLDRKI-EEKHGMSIPAMFREHGEPYFRAREK 61
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRHG---ISLWIDV--------PPGMVARMD 203
+ +++ + LV+ G G V+ + N+A+LR ++L DV G +D
Sbjct: 62 DAVREAAGRTNLVIATGGGTVKDAENVAILRQNGILVALTADVDTILQRTSARGARPVLD 121
Query: 204 HSGFPESEVLPQLFALYKEMRDGYATADVTV 234
H+ + + L E R Y AD+TV
Sbjct: 122 HADAGDRR--AAVVQLLDERRSLYDGADITV 150
>gi|423014726|ref|ZP_17005447.1| shikimate kinase [Achromobacter xylosoxidans AXX-A]
gi|338782342|gb|EGP46717.1| shikimate kinase [Achromobacter xylosoxidans AXX-A]
Length = 176
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+FLVGM A KT +G+ LA AL + D D EA G F E G+++ E+
Sbjct: 7 IFLVGMMGAGKTTIGRGLARALGRDFIDLDH-ELEARCGVRVPVIFEIEGEAGFRRRESA 65
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSAN-LALLRHGISLWI 192
L++ + +++ G GA+ ++ N L L GI +++
Sbjct: 66 ALEECTQRRNIILATGGGAILAAENRLRLRERGIVVYL 103
>gi|418937433|ref|ZP_13491073.1| Shikimate kinase [Rhizobium sp. PDO1-076]
gi|375055889|gb|EHS52109.1| Shikimate kinase [Rhizobium sp. PDO1-076]
Length = 211
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 74/158 (46%), Gaps = 13/158 (8%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ VG+ A K+ +G+ +A+ L + D+D + E S ++ F E ++ ET
Sbjct: 24 NLVFVGLMGAGKSAVGRMVANQLGLPFVDTD-VEIERVSRMSISELFTAYGEDEFRALET 82
Query: 155 EVLKQLSSMGRLVVCAGNGA-VQSSANLALLRHGISLW----IDVPPGMVARMDHSGFPE 209
V+K+L G VV G GA + + R GISLW +DV V + DH +
Sbjct: 83 RVIKRLLRSGPRVVSTGGGAFINDKTRKQIERGGISLWLKADLDVLWERVNKRDHRPLLK 142
Query: 210 SEVLPQLFALYKEMRDG----YATADVTVSLQKVASQL 243
+E Q K++ D Y AD+T+ + V ++
Sbjct: 143 TENPKQTL---KDLMDKRYPIYELADLTIQSRDVRKEV 177
>gi|148658619|ref|YP_001278824.1| shikimate kinase [Roseiflexus sp. RS-1]
gi|148570729|gb|ABQ92874.1| shikimate kinase [Roseiflexus sp. RS-1]
Length = 176
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 57/109 (52%), Gaps = 3/109 (2%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+ LVG++ + K+ + + LA L ++ D+D++V E G S F E E +++ E+
Sbjct: 8 IALVGLSGSGKSTVARLLAGRLGWHMCDTDAMV-EQMTGRSIPALFAEEGEAAFRECESA 66
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPG-MVARM 202
L + +V+ G G V +N LL+ + +W+D P ++AR+
Sbjct: 67 ALAAALARTPVVIATGGGIVVRESNRVLLKDQALVVWLDAPTAVLIARL 115
>gi|378768316|ref|YP_005196788.1| shikimater kinase II AroL [Pantoea ananatis LMG 5342]
gi|386014869|ref|YP_005933146.1| shikimater kinase II AroL [Pantoea ananatis AJ13355]
gi|386080447|ref|YP_005993972.1| shikimater kinase II AroL [Pantoea ananatis PA13]
gi|327392928|dbj|BAK10350.1| shikimater kinase II AroL [Pantoea ananatis AJ13355]
gi|354989628|gb|AER33752.1| shikimater kinase II AroL [Pantoea ananatis PA13]
gi|365187801|emb|CCF10751.1| shikimater kinase II AroL [Pantoea ananatis LMG 5342]
Length = 174
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 62/124 (50%), Gaps = 6/124 (4%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDS-LVFEAAGGESAAKAFRESDEKGYQQAE 153
S+FL+G KT +G+ L+ AL Y + D+D L F + A+ + ++ E
Sbjct: 4 SIFLIGARGCGKTTIGEALSHALGYAFRDTDHHLQFTTQ--RTVAEIVAAEGWESFRARE 61
Query: 154 TEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMVARMDHSGFPESEV 212
T+ LK +++ ++ G G V + N +R HG +W+ PP ++AR S PE+
Sbjct: 62 TDSLKAVTAPS-TIIATGGGMVLAEGNRRYMREHGQVIWLSAPPDILARRLESQ-PENAQ 119
Query: 213 LPQL 216
P L
Sbjct: 120 RPTL 123
>gi|415976059|ref|ZP_11558885.1| shikimate kinase [Acidithiobacillus sp. GGI-221]
gi|339833989|gb|EGQ61786.1| shikimate kinase [Acidithiobacillus sp. GGI-221]
Length = 246
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
S+ L+G + K+ +G+ LA LR Y DSD+L+ G + F E G+++ E
Sbjct: 4 SIILIGPMGSGKSTIGRLLAARLRLPYVDSDALIVHHTGVD-IPTIFEIEGESGFRERER 62
Query: 155 EVLKQLSSMGR-LVVCAGNGAVQSSANLALLR 185
+++ LS+ +V+ G GA+ AN LR
Sbjct: 63 KIIADLSTWSEPMVLATGGGAILDPANRHHLR 94
>gi|255525073|ref|ZP_05392018.1| Shikimate kinase [Clostridium carboxidivorans P7]
gi|255511226|gb|EET87521.1| Shikimate kinase [Clostridium carboxidivorans P7]
Length = 170
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 73/141 (51%), Gaps = 12/141 (8%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L+GM + KT +GK L + LR + D D + E G++ F+ E +++ E
Sbjct: 11 NIVLIGMPGSGKTTIGKILYEKLRTDFIDMDDYI-EDREGKTIPDIFKNG-EDYFRKLEK 68
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLA-LLRHGISLWIDVPPGMVAR--------MDHS 205
E + ++S+ ++ G G +++ +N+ L ++GI ++ID P +A+ +
Sbjct: 69 EAVCEVSTKKSAIISTGGGVIKNFSNIENLKKNGIVIFIDRPVENIAQDINVLSRPLLKD 128
Query: 206 GFPE-SEVLPQLFALYKEMRD 225
G + E+L + + LYK+ D
Sbjct: 129 GVGKLYELLDERYELYKKYSD 149
>gi|262193578|ref|YP_003264787.1| 3-dehydroquinate synthase [Haliangium ochraceum DSM 14365]
gi|262076925|gb|ACY12894.1| 3-dehydroquinate synthase [Haliangium ochraceum DSM 14365]
Length = 551
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 6/168 (3%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
VFL G K+ +G+ LA LR + D D V EA G + A F E G+++ E
Sbjct: 5 VFLTGFMATGKSTVGRQLAARLRRPFLDLDDAV-EAEAGHTVADIFASEGEIGFRRRERA 63
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVPPGMVARMDHSGFPESEVL- 213
L++++ V+ G GA NLA +R G+++ + P +G E +L
Sbjct: 64 ALQRIADGPAAVIATGGGAACHGDNLAQMRRSGLTIALTAPLATARARADAGERERPLLR 123
Query: 214 ---PQLFALYKEMRDGYATADVTVSLQKVASQLGYDDLDAVTTEDMTL 258
+L ALY+ Y A V + L ++ A+ TL
Sbjct: 124 ATEAELEALYRSREPMYRQAHACVRTEDSEPALLAREIAALVARAETL 171
>gi|256371043|ref|YP_003108867.1| Shikimate kinase [Acidimicrobium ferrooxidans DSM 10331]
gi|256007627|gb|ACU53194.1| Shikimate kinase [Acidimicrobium ferrooxidans DSM 10331]
Length = 170
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSD-SLVFEAAGGESAAKAFRESDEKGYQQAET 154
V L+G A KT +G+ LA L + D+D +LV E G S FR E G++Q E
Sbjct: 8 VVLIGFMGAGKTTVGRLLARRLGADFVDADDALVAET--GRSIPDLFRVRGEVGFRQLEG 65
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVP 195
++L +L R V+ G GA++ L+ + ++++VP
Sbjct: 66 DLLGRLLRSARGVIALGGGAIEHDELAELVAPWLVIYLEVP 106
>gi|399519189|ref|ZP_10759997.1| aroK [Pseudomonas pseudoalcaligenes CECT 5344]
gi|399113013|emb|CCH36555.1| aroK [Pseudomonas pseudoalcaligenes CECT 5344]
Length = 172
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+V LVG A K+ +G+ LA LR + DSD + E G F E+G+++ E
Sbjct: 3 NVILVGPMGAGKSTIGRLLAKELRVPFKDSDKEI-EQRTGADIPWIFDVEGEQGFREREQ 61
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRHG 187
V+ +LS LV+ G GAV N L G
Sbjct: 62 AVIAELSQQDGLVLATGGGAVMRPENRQALHAG 94
>gi|358447308|ref|ZP_09157833.1| shikimate kinase [Corynebacterium casei UCMA 3821]
gi|356606677|emb|CCE56193.1| shikimate kinase [Corynebacterium casei UCMA 3821]
Length = 183
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
V LVG A K+ +G+ L+ AL DSD L+ EAA G+S + F + E ++ E +
Sbjct: 19 VVLVGPPGAGKSTIGRRLSRALNVGLVDSDQLI-EAAEGKSCGEVFADLGEPKFRDIEAQ 77
Query: 156 -VLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDV 194
V + L S G VV G GAV + + LL + + + IDV
Sbjct: 78 HVAEALQSDG--VVSLGGGAVLTESTRQLLENHVVVLIDV 115
>gi|83942299|ref|ZP_00954760.1| shikimate kinase [Sulfitobacter sp. EE-36]
gi|83846392|gb|EAP84268.1| shikimate kinase [Sulfitobacter sp. EE-36]
Length = 171
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 2/97 (2%)
Query: 98 LVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEVL 157
+VGM A KT +G+ LA L + DSD + EAA + + F E +++ ETEV+
Sbjct: 1 MVGMMGAGKTAVGRALAAKLGVPFVDSDHEI-EAAANLTVPEIFERDGEPFFRKRETEVI 59
Query: 158 KQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
+L ++ G GA + AN + G+S+W+D
Sbjct: 60 SRLLDKEPGILSTGGGAFLAEANRENISARGVSVWLD 96
>gi|419839439|ref|ZP_14362846.1| shikimate kinase 1 [Haemophilus haemolyticus HK386]
gi|386909299|gb|EIJ73974.1| shikimate kinase 1 [Haemophilus haemolyticus HK386]
Length = 180
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L + DSD+++ E G + + F E+G+++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRQLAQQLNMDFIDSDAVIEERTGAD-ISWIFDLEGEEGFRKREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
++ +L+ M +V+ G GAV S + L GI ++++
Sbjct: 65 RIINELTQMQGIVLSTGGGAVLSKESRNYLSARGIVIYLE 104
>gi|86147329|ref|ZP_01065643.1| shikimate kinase I [Vibrio sp. MED222]
gi|218710789|ref|YP_002418410.1| shikimate kinase I [Vibrio splendidus LGP32]
gi|407070276|ref|ZP_11101114.1| shikimate kinase I [Vibrio cyclitrophicus ZF14]
gi|85834894|gb|EAQ53038.1| shikimate kinase I [Vibrio sp. MED222]
gi|218323808|emb|CAV20165.1| Shikimate kinase [Vibrio splendidus LGP32]
Length = 172
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L + DSD+++ E G + A F E G+++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRHLASQLHMEFLDSDTVIEERTGAD-IAWVFDVEGEDGFRKREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
V+ L+ +V+ G G+V S N L GI ++++
Sbjct: 65 SVINDLTEEQGIVLATGGGSVLSKENRNRLSARGIVVYLE 104
>gi|429768911|ref|ZP_19301039.1| shikimate kinase [Brevundimonas diminuta 470-4]
gi|429188262|gb|EKY29150.1| shikimate kinase [Brevundimonas diminuta 470-4]
Length = 189
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ LVG+ K+ +G+ LA L + D D ++ EAA G + ++ F E ++ E
Sbjct: 17 TIALVGLMGVGKSTVGRRLAQRLGLPFADGDQVIEEAA-GMTVSEIFASRGEAEFRAGEA 75
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWI 192
V+++L +V+ G GAV + AL++ H +S+W+
Sbjct: 76 RVMRRLLEGPPIVLATGGGAVLNPDTRALMKQHAVSVWM 114
>gi|359445782|ref|ZP_09235498.1| shikimate kinase [Pseudoalteromonas sp. BSi20439]
gi|392555789|ref|ZP_10302926.1| shikimate kinase I [Pseudoalteromonas undina NCIMB 2128]
gi|115312162|sp|Q3IJC5.2|AROK_PSEHT RecName: Full=Shikimate kinase; Short=SK
gi|358040380|dbj|GAA71747.1| shikimate kinase [Pseudoalteromonas sp. BSi20439]
Length = 172
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ +AD L + DSD + E G A F E+G++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRHIADQLHLEFVDSDQEI-ERRTGADIAWVFDLEGEEGFRLREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQS-SANLALLRHGISLWIDVP 195
V+ L+ M +V+ G G+V S L GI ++++ P
Sbjct: 65 SVIGDLTEMQGIVLATGGGSVMSKEVRNKLSARGIVVYLETP 106
>gi|328954347|ref|YP_004371681.1| shikimate kinase [Desulfobacca acetoxidans DSM 11109]
gi|328454671|gb|AEB10500.1| Shikimate kinase [Desulfobacca acetoxidans DSM 11109]
Length = 186
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 4/124 (3%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L+G A KT +G+ LA+ L ++D D V E GE+ A+ + +++ E
Sbjct: 11 NIVLIGFRAAGKTTVGRRLAELLNRPFYDLDQ-VLEQEAGETIARLVAQEGWPAFRRREK 69
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMV-ARMDHSGFPESEV 212
++++ +S LV+ G G + N L+ G +W+ P + AR+ S PE
Sbjct: 70 ALVERFASQKGLVLATGGGVILDPENTTRLKASGRLVWLKTAPETIRARLRRSQ-PEHAA 128
Query: 213 LPQL 216
P L
Sbjct: 129 RPGL 132
>gi|343508382|ref|ZP_08745725.1| shikimate kinase I [Vibrio ichthyoenteri ATCC 700023]
gi|343511623|ref|ZP_08748782.1| shikimate kinase I [Vibrio scophthalmi LMG 19158]
gi|343515901|ref|ZP_08752949.1| shikimate kinase I [Vibrio sp. N418]
gi|342793890|gb|EGU29674.1| shikimate kinase I [Vibrio ichthyoenteri ATCC 700023]
gi|342797536|gb|EGU33184.1| shikimate kinase I [Vibrio sp. N418]
gi|342797825|gb|EGU33464.1| shikimate kinase I [Vibrio scophthalmi LMG 19158]
Length = 172
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L + DSD+++ E G + A F E G++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRHLAQQLHMEFVDSDTVIEERTGAD-IAWVFDVEGEAGFRDREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
+V+ L+ +V+ G G++ S N L GI ++++
Sbjct: 65 KVINDLTEEQGIVLATGGGSIMSKENRNRLSARGIVVYLE 104
>gi|182419138|ref|ZP_02950392.1| shikimate kinase [Clostridium butyricum 5521]
gi|237669182|ref|ZP_04529164.1| shikimate kinase [Clostridium butyricum E4 str. BoNT E BL5262]
gi|182377093|gb|EDT74663.1| shikimate kinase [Clostridium butyricum 5521]
gi|237655069|gb|EEP52627.1| shikimate kinase [Clostridium butyricum E4 str. BoNT E BL5262]
Length = 171
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 80/167 (47%), Gaps = 17/167 (10%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
V ++GM + KT +GK L L ++D D + E +S + F E+ E ++ ET
Sbjct: 4 KVVIIGMPGSGKTTIGKILGRELDLKFYDMDEYIQERTS-KSILELF-ENGEDYFRNIET 61
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVP-PGMVARMDHSGFP---- 208
++ ++LS +++ G G V+ N+ +L+ + +++D P ++ +D S P
Sbjct: 62 DMCRELSKEKNVLISTGGGVVKKKENIDVLKKDALIIFLDRPVEKILEDVDVSKRPLLKD 121
Query: 209 -ESEVL---PQLFALYKEMRDGYATAD-----VTVSLQKVASQLGYD 246
+ V+ + + LYK+ D D V L+ V +Q+ +D
Sbjct: 122 GKERVINLYNERYELYKKYADEIVVNDSDMIEVIERLKNVITQMNFD 168
>gi|84390818|ref|ZP_00991510.1| shikimate kinase I [Vibrio splendidus 12B01]
gi|84376621|gb|EAP93498.1| shikimate kinase I [Vibrio splendidus 12B01]
Length = 172
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L + DSD+++ E G + A F E G+++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRHLASQLHMEFLDSDTVIEERTGAD-IAWVFDVEGEDGFRKREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
V+ L+ +V+ G G+V S N L GI ++++
Sbjct: 65 SVINDLTEEQGIVLATGGGSVLSKENRNRLSARGIVVYLE 104
>gi|148676184|gb|EDL08131.1| threonine synthase-like 1 (bacterial), isoform CRA_b [Mus musculus]
Length = 749
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 84/174 (48%), Gaps = 16/174 (9%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L+G + KT +G+ L D L D DS V E A SA++ ++ + + + E
Sbjct: 59 NIVLMGPPGSGKTTVGRILGDKLGCCVIDVDSDVLEKAWNMSASEKLQDVGNERFLEEEG 118
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVP-PGMVARM----------D 203
+ + LS+ G ++ +G+ + ++ L ++GI +++DVP +++R+
Sbjct: 119 KTVLNLSASGSVISLSGSNPMHDASMWHLKKNGIVVYLDVPLTDIISRLKSMRIDRIVGQ 178
Query: 204 HSGFPESEVLPQLFALYKEMRDGYATADVTVSLQKVASQL-----GYDDLDAVT 252
++G + L + YK+ D + S ++VA ++ Y D+D+ T
Sbjct: 179 NTGASLRDSLKHVRLYYKKWYDARVFCESGASAEEVADKVLDVVKRYQDVDSET 232
>gi|121607017|ref|YP_994824.1| shikimate kinase [Verminephrobacter eiseniae EF01-2]
gi|121551657|gb|ABM55806.1| shikimate kinase [Verminephrobacter eiseniae EF01-2]
Length = 175
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 67/138 (48%), Gaps = 9/138 (6%)
Query: 98 LVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEVL 157
LVGM A K+ +G+ LAD + + D D E A G S F E+ ++ E++ L
Sbjct: 7 LVGMPGAGKSTVGQRLADRVGVPFIDLDQW-LEQAIGSSIRSYFEAQGEERFRDLESQGL 65
Query: 158 KQLSSM-GRLVVCAGNGAVQSSANLALLR---HGISLWIDVPPGMVARMDHSGFPESEVL 213
+++ G LV+ G GAV + N A+LR H + LW +P + R+ H ++ L
Sbjct: 66 AEVARQPGGLVLATGGGAVLRAPNRAVLRQFGHVLYLWA-MPEDLYQRVKHD---QTRPL 121
Query: 214 PQLFALYKEMRDGYATAD 231
Q + +R YA D
Sbjct: 122 LQTDDPLRRLRQLYAERD 139
>gi|37525212|ref|NP_928556.1| shikimate kinase II [Photorhabdus luminescens subsp. laumondii
TTO1]
gi|81419992|sp|Q7N7B0.1|AROL_PHOLL RecName: Full=Shikimate kinase 2; Short=SK 2
gi|36784639|emb|CAE13539.1| Shikimate kinase II (SKII) [Photorhabdus luminescens subsp.
laumondii TTO1]
Length = 174
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 70/134 (52%), Gaps = 8/134 (5%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+F+VG A KT +GK LA+ L Y + D+D + + + A + + ++Q E++
Sbjct: 5 LFIVGARGAGKTTVGKLLANELSYTFIDTDHHI-QQTSNMTIADIVNQQGWQQFRQLESQ 63
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMVA-RMDHSGFPESEVL 213
L+Q++ + R V+ G G + S+ N +R +G +++ ++A R+ PES
Sbjct: 64 ALQQVTQINR-VISTGGGIILSAENRQYMRQNGTVIYLQASASILAERLMQQ--PESTQR 120
Query: 214 PQLF--ALYKEMRD 225
P L ++ +EM +
Sbjct: 121 PSLTGKSIVEEMEE 134
>gi|319785494|ref|YP_004144970.1| shikimate kinase [Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|337270846|ref|YP_004614901.1| Shikimate kinase [Mesorhizobium opportunistum WSM2075]
gi|433777086|ref|YP_007307553.1| shikimate kinase [Mesorhizobium australicum WSM2073]
gi|317171382|gb|ADV14920.1| Shikimate kinase [Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|336031156|gb|AEH90807.1| Shikimate kinase [Mesorhizobium opportunistum WSM2075]
gi|433669101|gb|AGB48177.1| shikimate kinase [Mesorhizobium australicum WSM2073]
Length = 1733
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 65/150 (43%), Gaps = 5/150 (3%)
Query: 56 TRSIADDTTSNTVTKVAAEDPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLAD 115
+RS A T+ + + VA + + + A I L V LVGM + K+ +G LA
Sbjct: 1425 SRSRAAGTSRSPI--VARQQSAVILSPHAGKILAALGTRPVVLVGMPASGKSSIGPRLAR 1482
Query: 116 ALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAV 175
L + D D L+ + G F S E +++ ET L + G +V+ G G
Sbjct: 1483 ELGVEFVDIDKLIIKGHG--DIKDIFERSGEPYFRELETRELAEQLKKGPMVIATGGGGF 1540
Query: 176 QSSANLALLRH-GISLWIDVPPGMVARMDH 204
N L+R +S+W++ + R H
Sbjct: 1541 VKQPNRDLIREKAVSIWLNTDLDEIGRRLH 1570
>gi|297181066|gb|ADI17265.1| shikimate kinase [uncultured alpha proteobacterium HF0070_17D04]
Length = 190
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 7/145 (4%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
V LVGM + KT +GK LA L + DSD+ + E A G S A+ F + E ++ E +
Sbjct: 22 VTLVGMMGSGKTIIGKKLAQELDLPFIDSDTRIVETA-GISIAEIFDIAGEAKFRAMERD 80
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALL-RHGISLWIDVPP-GMVARMDHSG----FPE 209
++ G ++ G GA+ + LL + I +W+ P ++ R+ +G
Sbjct: 81 AIRIAVDEGPAILSTGGGAICAPDTAELLCKRTIVVWLSAAPETLLGRIGSTGSRPLLHG 140
Query: 210 SEVLPQLFALYKEMRDGYATADVTV 234
+ L L L E Y A +T+
Sbjct: 141 DDPLGMLGRLAAERETDYGKAHITI 165
>gi|29243946|ref|NP_808256.1| threonine synthase-like 1 isoform a [Mus musculus]
gi|62511210|sp|Q8BH55.1|THNS1_MOUSE RecName: Full=Threonine synthase-like 1; Short=TSH1
gi|26325470|dbj|BAC26489.1| unnamed protein product [Mus musculus]
gi|26350829|dbj|BAC39051.1| unnamed protein product [Mus musculus]
gi|109731427|gb|AAI17855.1| Threonine synthase-like 1 (bacterial) [Mus musculus]
gi|111598877|gb|AAH90667.1| Threonine synthase-like 1 (bacterial) [Mus musculus]
Length = 747
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 84/174 (48%), Gaps = 16/174 (9%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L+G + KT +G+ L D L D DS V E A SA++ ++ + + + E
Sbjct: 57 NIVLMGPPGSGKTTVGRILGDKLGCCVIDVDSDVLEKAWNMSASEKLQDVGNERFLEEEG 116
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVP-PGMVARM----------D 203
+ + LS+ G ++ +G+ + ++ L ++GI +++DVP +++R+
Sbjct: 117 KTVLNLSASGSVISLSGSNPMHDASMWHLKKNGIVVYLDVPLTDIISRLKSMRIDRIVGQ 176
Query: 204 HSGFPESEVLPQLFALYKEMRDGYATADVTVSLQKVASQL-----GYDDLDAVT 252
++G + L + YK+ D + S ++VA ++ Y D+D+ T
Sbjct: 177 NTGASLRDSLKHVRLYYKKWYDARVFCESGASAEEVADKVLDVVKRYQDVDSET 230
>gi|392534021|ref|ZP_10281158.1| shikimate kinase I [Pseudoalteromonas arctica A 37-1-2]
Length = 172
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ +AD L + DSD + E G A F E+G++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRHIADQLHLEFVDSDQEI-ERRTGADIAWVFDLEGEEGFRLREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQS-SANLALLRHGISLWIDVP 195
V+ L+ M +V+ G G+V S L GI ++++ P
Sbjct: 65 SVIGDLTEMQGIVLATGGGSVMSKEVRNKLSARGIVVYLETP 106
>gi|440228122|ref|YP_007335213.1| shikimate kinase [Rhizobium tropici CIAT 899]
gi|440039633|gb|AGB72667.1| shikimate kinase [Rhizobium tropici CIAT 899]
Length = 239
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 102/237 (43%), Gaps = 13/237 (5%)
Query: 35 SYAPIRTS---LQYSIISRKPRITTRSIADDTTSNTVTKVAAEDPSFAVKKKAADISTEL 91
+Y P R S LQ + R+ R+ DDT S + + + + D +
Sbjct: 4 NYIPSRVSRRILQTCL--RQRRLDATGAFDDTVSKEIVNGPMSEQVLTLAESLRDKARAA 61
Query: 92 KGT-SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
G ++ VG+ A K+ +G+ +A L + D+D+ + E + A+ F E+ ++
Sbjct: 62 LGQRNLVFVGLMGAGKSSIGRPVAHQLGLPFVDTDAEI-ERVSRMTIAELFAAYGEQEFR 120
Query: 151 QAETEVLKQLSSMGRLVVCAGNGA-VQSSANLALLRHGISLW----IDVPPGMVARMDHS 205
ET V+K+L G VV G GA + L + R +S+W +DV V + D
Sbjct: 121 ALETRVIKRLLKGGPRVVSTGGGAFINERTRLHVKRGSLSVWLKADLDVLWERVNKRDTR 180
Query: 206 GFPESEVLPQ-LFALYKEMRDGYATADVTVSLQKVASQLGYDDLDAVTTEDMTLEVK 261
++E Q L L YA AD+TV + V + ++ A E T E K
Sbjct: 181 PLLKTENPKQTLENLMNARYPIYAEADITVLSRDVNKDIMVREVLAAIAEGKTAESK 237
>gi|424864429|ref|ZP_18288333.1| shikimate kinase [SAR86 cluster bacterium SAR86B]
gi|400759858|gb|EJP74039.1| shikimate kinase [SAR86 cluster bacterium SAR86B]
Length = 169
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 77/158 (48%), Gaps = 14/158 (8%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++F+VG + K+ +GK ++D L + D+D + E G S F E+G+++ ET
Sbjct: 2 NIFIVGPMGSGKSTVGKIISDELFLTFHDTDEEI-ENRTGASIDWIFDLEGEEGFRKRET 60
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANL-ALLRHGISLWIDVPPGMVAR---------MDH 204
++L +L+ + +V+ G G + S N L G ++ P + +
Sbjct: 61 KILDELAQLNSIVLSTGGGIILSDKNRDTLSSRGTVFYLATPISVQLERTSKDKDRPLLK 120
Query: 205 SGFPESEVLPQLFALYKEMRDGYATADVTVSLQKVASQ 242
+G PE+ +L +L +E+ + + AD V+ + + SQ
Sbjct: 121 NGDPET-ILKELHETREELYE--SVADYVVNTENLTSQ 155
>gi|118445057|ref|YP_879086.1| shikimate kinase [Clostridium novyi NT]
gi|118135513|gb|ABK62557.1| shikimate kinase [Clostridium novyi NT]
Length = 164
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 73/138 (52%), Gaps = 5/138 (3%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L+GM KT +GK L++ L+ + D D + + G+S + F E+ E+ ++ E+
Sbjct: 7 NIVLIGMPGCGKTTIGKKLSEILKCDFCDVDEYIVNST-GKSINEIF-ENGEEFFRDIES 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANL-ALLRHGISLWIDVP-PGMVARMDHSGFP-ESE 211
+ +K++SS V+ G GA++ N+ +L G +I+ P + + +D P +
Sbjct: 65 KSIKEVSSCIPKVISTGGGAIKRKQNIDSLKEKGTIFFINRPIEDICSDVDVKSRPLLKD 124
Query: 212 VLPQLFALYKEMRDGYAT 229
+ +++ LY+E D Y
Sbjct: 125 GVGKIYKLYEERYDLYKN 142
>gi|430819939|ref|ZP_19438583.1| shikimate kinase [Enterococcus faecium E0045]
gi|430440142|gb|ELA50419.1| shikimate kinase [Enterococcus faecium E0045]
Length = 169
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
S+ L+G KT +GK LA L+ Y D D+ + E S A+ F EK +++ E+
Sbjct: 3 SILLIGFMGVGKTTIGKGLAQRLQKEYVDLDTKIEEHIQL-SIAEYFHYYGEKSFRKVES 61
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR 185
++L++LS+ + ++ G G VQS+ N L+
Sbjct: 62 DILRKLSNEDK-IIATGGGIVQSAENRRFLK 91
>gi|392576505|gb|EIW69636.1| hypothetical protein TREMEDRAFT_44120 [Tremella mesenterica DSM
1558]
Length = 1595
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+FL+GM A KT++G+ A L Y D+D +VFE S + + +++ ETE
Sbjct: 879 IFLIGMRGAGKTYIGQLAASTLLCPYIDAD-VVFETRTSMSVSDYVAVNGWPAFRETETE 937
Query: 156 VLKQLSSM-GRLVVCAGNGAVQSSANLALLRHGI 188
+L +LS+ G+ ++ G G V++ +L+ I
Sbjct: 938 ILSELSATAGKSIISLGGGVVETPEARDILKSHI 971
>gi|354558141|ref|ZP_08977397.1| Shikimate kinase [Desulfitobacterium metallireducens DSM 15288]
gi|353548866|gb|EHC18310.1| Shikimate kinase [Desulfitobacterium metallireducens DSM 15288]
Length = 175
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
+K ++ L+G KT +GK LA L + + D+D L E G S ++ FR+ E ++
Sbjct: 1 MKIENIVLIGFMGTGKTSVGKRLAKHLGWDFLDTD-LAIEEISGTSVSEIFRKHGETRFR 59
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSAN 180
ET ++K+L ++V+ G G + N
Sbjct: 60 SEETVLVKRLKERKKMVIATGGGTPLNPEN 89
>gi|188036033|pdb|2PT5|A Chain A, Crystal Structure Of Shikimate Kinase (Aq_2177) From
Aquifex Aeolicus Vf5
gi|188036034|pdb|2PT5|B Chain B, Crystal Structure Of Shikimate Kinase (Aq_2177) From
Aquifex Aeolicus Vf5
gi|188036035|pdb|2PT5|C Chain C, Crystal Structure Of Shikimate Kinase (Aq_2177) From
Aquifex Aeolicus Vf5
gi|188036036|pdb|2PT5|D Chain D, Crystal Structure Of Shikimate Kinase (Aq_2177) From
Aquifex Aeolicus Vf5
Length = 168
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 73/149 (48%), Gaps = 9/149 (6%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
++L+G + K+ +G L+ +L ++D D V + G S + F + E +++ E E
Sbjct: 3 IYLIGFXCSGKSTVGSLLSRSLNIPFYDVDEEV-QKREGLSIPQIFEKKGEAYFRKLEFE 61
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVP-PGMVARMDHSGFPESEVL 213
VLK LS +V+ G G + L + G +++ID+P + R S E +L
Sbjct: 62 VLKDLSEKENVVISTGGGLGANEEALNFXKSRGTTVFIDIPFEVFLERCKDS--KERPLL 119
Query: 214 P----QLFALYKEMRDGYATADVTVSLQK 238
++ L++E R Y+ AD+ V +K
Sbjct: 120 KRPLDEIKNLFEERRKIYSKADIKVKGEK 148
>gi|399886931|ref|ZP_10772808.1| shikimate kinase [Clostridium arbusti SL206]
Length = 170
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 74/144 (51%), Gaps = 8/144 (5%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ +GM + KT + K +A +D+D + E G++ F++ E +++ ET
Sbjct: 6 NIVFIGMPGSGKTTIAKNIAKIHGLKLYDTDEYI-EKKEGKTITDIFKQG-ESYFRKLET 63
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVP-PGMVARMDHSGFPESE- 211
+V+K++SS +V+ G G ++S N+ L+ +GI L+I+ P ++ +D P +
Sbjct: 64 QVVKEISSEKSVVISTGGGVIKSLDNMKYLKENGIVLFINRPIEDIIKDVDTVNRPLLKG 123
Query: 212 VLPQLFALYKE---MRDGYATADV 232
L+ LY E + GY ++
Sbjct: 124 TKEHLYKLYDERFHLYKGYCDYEI 147
>gi|330828669|ref|YP_004391621.1| Shikimate kinase I [Aeromonas veronii B565]
gi|406678121|ref|ZP_11085299.1| shikimate kinase [Aeromonas veronii AMC35]
gi|423200773|ref|ZP_17187353.1| shikimate kinase [Aeromonas veronii AER39]
gi|423210645|ref|ZP_17197199.1| shikimate kinase [Aeromonas veronii AER397]
gi|328803805|gb|AEB49004.1| Shikimate kinase I [Aeromonas veronii B565]
gi|404615030|gb|EKB12003.1| shikimate kinase [Aeromonas veronii AER397]
gi|404619344|gb|EKB16258.1| shikimate kinase [Aeromonas veronii AER39]
gi|404622807|gb|EKB19663.1| shikimate kinase [Aeromonas veronii AMC35]
Length = 172
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 78/163 (47%), Gaps = 16/163 (9%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FL+G A K+ +G+ LA+ L +FDSD + E G F E+G++ E
Sbjct: 6 NIFLIGPMGAGKSTIGRHLAEQLHMEFFDSDHEI-ERRSGADIGWVFDVEGEEGFRIREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVP-PGMVARMD--------H 204
+V+ +LS +V+ G GA++S L GI ++++ +AR
Sbjct: 65 KVIGELSEQQGIVLATGGGAIKSRETRNKLSARGIVVYLETTIEKQLARTQRDKRRPLLQ 124
Query: 205 SGFPESEVLPQLF----ALYKEMRDGYATADVTVSLQKVASQL 243
+ P EVL +L ALY+E+ D D S + VA+Q+
Sbjct: 125 TEEPAREVLERLAQERNALYEEVADFVVHTD-DQSAKIVANQI 166
>gi|386815568|ref|ZP_10102786.1| shikimate kinase [Thiothrix nivea DSM 5205]
gi|386420144|gb|EIJ33979.1| shikimate kinase [Thiothrix nivea DSM 5205]
Length = 180
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ LVG+ A K+ +G+ LA L ++DSD V E G S F E+G++ E
Sbjct: 4 NIILVGLMGAGKSTIGRQLARRLNLEFYDSDK-VIEERTGVSIPTIFAIEGEQGFRDREE 62
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRHG 187
+++++L ++ +++ G G+V N A ++ G
Sbjct: 63 QIIEELCALPGILLATGGGSVLRETNRAHIKAG 95
>gi|408822903|ref|ZP_11207793.1| shikimate kinase [Pseudomonas geniculata N1]
Length = 180
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 83/179 (46%), Gaps = 27/179 (15%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L+G A KT +G+ LA+ + D D + +AAG S F S E G++ E
Sbjct: 6 NLILIGPMGAGKTCIGRRLAERFTLDFVDVDQAIVDAAGA-SIPTIFEHSGEAGFRSHER 64
Query: 155 EVLKQ-LSSMGRLVVCAGNGAVQSSANLALL-RHGISLWIDVPPGMVARMDH----SGFP 208
E L + L G+L V G GAV N AL+ + G +++ V + A+++ G P
Sbjct: 65 EALARVLEGRGQL-VSTGGGAVLDPGNRALIAQRGFVVYLRV--SVAAQLERLARDKGRP 121
Query: 209 ------ESEVLPQLFA----LYKEM------RDGYATADVTVSL-QKVASQLGYDDLDA 250
+VL L A LY+E+ D Y AD T L K+A+Q DL A
Sbjct: 122 LLQRPDREQVLHDLAAHRDPLYRELADLTLDTDPYTAADATAHLVVKLATQWQRQDLTA 180
>gi|302877408|ref|YP_003845972.1| shikimate kinase [Gallionella capsiferriformans ES-2]
gi|302580197|gb|ADL54208.1| Shikimate kinase [Gallionella capsiferriformans ES-2]
Length = 187
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 56/106 (52%), Gaps = 2/106 (1%)
Query: 88 STELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEK 147
+ +++ ++ LVGM + KT +G+ LA L + DSD + + G + F E
Sbjct: 9 TRKIQSGNLILVGMMGSGKTTMGRILARHLNKVFVDSDEEI-QFRTGVTIPHIFDVEGEP 67
Query: 148 GYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALL-RHGISLWI 192
G++Q ET+ L L LV+ G GAV + N A++ +GI +++
Sbjct: 68 GFRQRETDALAALVVRNDLVLATGGGAVLAPENRAMMSENGIVIYL 113
>gi|270307832|ref|YP_003329890.1| shikimate kinase [Dehalococcoides sp. VS]
gi|270153724|gb|ACZ61562.1| shikimate kinase [Dehalococcoides sp. VS]
Length = 176
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 76/148 (51%), Gaps = 7/148 (4%)
Query: 94 TSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAE 153
++ L+G A KT + K L++ L +D+ + E G S + F+E E+ ++Q E
Sbjct: 5 NNIALIGFMGAGKTSVSKLLSEKLGKTLVSTDTCI-ETCEGLSISSIFKEKGEEYFRQME 63
Query: 154 TEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDV-PPGMVARM-DHSGFP-- 208
+ VL+ + ++ G G V NL+++R + + ++++ P + AR+ +H+ P
Sbjct: 64 SRVLEDVCRQPNQIIDCGGGIVTRPQNLSIMRLNCLVIYLESRPEDLEARLKNHTNRPLY 123
Query: 209 ESEVLPQLFALYKEMRDGYA-TADVTVS 235
+E ++ L + + Y AD+TVS
Sbjct: 124 NAERSDKMIKLLESRQPLYRDAADITVS 151
>gi|452963625|gb|EME68687.1| shikimate kinase [Magnetospirillum sp. SO-1]
Length = 191
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Query: 93 GTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQA 152
G +V LVG+ A K+ +G+ LA L + DSD + FEAA G S + F E ++
Sbjct: 17 GRTVVLVGLMGAGKSCVGRRLAARLGLDFLDSD-VEFEAASGSSISDYFARFGEAAFRDG 75
Query: 153 ETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWI 192
E +V+ +L +V+ G GA A ++ G S+WI
Sbjct: 76 ERKVIARLLDGPPVVLATGGGAFIDPATRERIKSTGTSVWI 116
>gi|359782653|ref|ZP_09285873.1| shikimate kinase [Pseudomonas psychrotolerans L19]
gi|359369473|gb|EHK70044.1| shikimate kinase [Pseudomonas psychrotolerans L19]
Length = 172
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG + K+ +G+ LA LR + DSD ++ E G + F E+G+++ E
Sbjct: 3 NLFLVGPMGSGKSTIGRLLAKELRLPFKDSDKVIEERTGAD-IPWIFDVEGEQGFRERER 61
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRHG 187
+ +L + LV+ G GAV N L+ G
Sbjct: 62 AAIAELCAENGLVMATGGGAVLREDNRQALKRG 94
>gi|194366808|ref|YP_002029418.1| shikimate kinase [Stenotrophomonas maltophilia R551-3]
gi|238693492|sp|B4SSA3.1|AROK_STRM5 RecName: Full=Shikimate kinase; Short=SK
gi|194349612|gb|ACF52735.1| Shikimate kinase [Stenotrophomonas maltophilia R551-3]
Length = 180
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 81/177 (45%), Gaps = 23/177 (12%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L+G A KT +G+ LA+ + D D + +AAG S F S E G++ E
Sbjct: 6 NLILIGPMGAGKTCIGRRLAERFTLDFVDVDQAIVDAAGA-SIPTIFEHSGETGFRSHER 64
Query: 155 EVL-KQLSSMGRLVVCAGNGAVQSSANLALL-RHGISLWIDVPPG-MVARMDH-SGFP-- 208
E L + L G+L V G GAV N AL+ R G +++ V + R+ G P
Sbjct: 65 EALARVLEGRGQL-VSTGGGAVLDPDNRALIARRGFVVYLRVSVAEQLERLARDKGRPLL 123
Query: 209 ----ESEVLPQLFA----LYKEM------RDGYATADVTVSL-QKVASQLGYDDLDA 250
+VL L A LY+E+ D Y AD T L K+A+Q DL A
Sbjct: 124 QRPDREQVLHDLAAHRDPLYRELADLILDTDPYTAADATAQLVVKLATQWQRQDLTA 180
>gi|431658098|ref|ZP_19523898.1| shikimate kinase [Enterococcus faecium E1904]
gi|430600458|gb|ELB38103.1| shikimate kinase [Enterococcus faecium E1904]
Length = 169
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
S+ L+G A KT +GK LA L+ Y D D+ + E S A+ F EK +++ E+
Sbjct: 3 SILLIGFMGAGKTTIGKGLAQRLQKEYVDLDTKIEEHIQL-SIAEYFHYYGEKSFRKVES 61
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR 185
+L++LS+ + ++ G G VQS+ N L+
Sbjct: 62 VILRKLSNEDK-IIATGGGIVQSAENRRFLK 91
>gi|402571545|ref|YP_006620888.1| shikimate kinase [Desulfosporosinus meridiei DSM 13257]
gi|402252742|gb|AFQ43017.1| shikimate kinase [Desulfosporosinus meridiei DSM 13257]
Length = 177
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L+G K+ +GK LA +L + + D+D + E S ++ FR E ++ E+
Sbjct: 3 NIVLIGFMGTGKSTVGKRLAQSLSWNFVDTDCEIGEVTS-LSVSEIFRRHGETRFRSEES 61
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANL-ALLRHGISLWIDVP-PGMVARMDHSGFPESEV 212
V+ +LS +LV+ G G V + NL AL ++GI + + +++R+ H
Sbjct: 62 IVVTRLSQQEQLVIATGGGTVLNPLNLSALAKNGIVIALHASLEAILSRIGHKNDRPLLK 121
Query: 213 LPQ--LFALYKEMRDGYATADVTV 234
P+ + L+ E ++ Y AD V
Sbjct: 122 GPREAIEKLWSERQNVYVQADYIV 145
>gi|429107611|ref|ZP_19169480.1| Shikimate kinase III [Cronobacter malonaticus 681]
gi|426294334|emb|CCJ95593.1| Shikimate kinase III [Cronobacter malonaticus 681]
Length = 174
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 70/140 (50%), Gaps = 8/140 (5%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
++LVG KT G+ LA AL Y + D+D + E A RE G++ E++
Sbjct: 5 IYLVGARGCGKTTTGEALARALAYGFADTDRWLLEQTQMTVAEVVEREG-WPGFRARESK 63
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMVA-RMDHSGFPESEVL 213
L+ +++ VV G G V N +R HG+ ++++VP ++A R++ FPE+
Sbjct: 64 ALQAVTAPA-TVVATGGGMVLRDENREFMRAHGVVIYLNVPVDVLAQRLE--AFPEAGQR 120
Query: 214 PQLFA--LYKEMRDGYATAD 231
P L + +E+ D A D
Sbjct: 121 PTLTGKPMTEEIADVLAVRD 140
>gi|319790258|ref|YP_004151891.1| Shikimate kinase [Thermovibrio ammonificans HB-1]
gi|317114760|gb|ADU97250.1| Shikimate kinase [Thermovibrio ammonificans HB-1]
Length = 168
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
V LVG + K+ +GK L LR D DSL+ E G++ + FRE ++ +++ E+
Sbjct: 2 KVVLVGFMGSGKSTVGKLLERELRIPLIDLDSLI-EERTGKTIPQIFREEGQERFREIES 60
Query: 155 EVLKQ-LSSMGRLVVCAGNGAVQSSANLALL-RHGISLWIDVP 195
++L++ LSS G ++ G G N + R +S+++ P
Sbjct: 61 QLLRELLSSKGSFIISTGGGTPCHKNNAEEINRKAVSVFLYAP 103
>gi|253990690|ref|YP_003042046.1| Shikimate kinase 2 [Photorhabdus asymbiotica]
gi|253782140|emb|CAQ85304.1| Shikimate kinase 2 [Photorhabdus asymbiotica]
Length = 174
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 74/141 (52%), Gaps = 10/141 (7%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+F+VG A KT +GK LA+ L Y + D+D + + + A R+ ++ ++Q E++
Sbjct: 5 LFIVGARGAGKTTVGKLLANELSYTFIDTDHHIQQTSNMTIADIVNRQGWQQ-FRQLESQ 63
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALL-RHGISLWIDVPPGMVAR--MDHSGFPESEV 212
L+Q+S R V+ G G + S+ N + ++G+ +++ ++A M H PE+
Sbjct: 64 ALQQVSQKNR-VISTGGGIILSAENRQYMQQNGMVIYLQASADILAERLMQH---PENTQ 119
Query: 213 LPQLF--ALYKEMRDGYATAD 231
P L ++ +EM + A +
Sbjct: 120 RPSLTGKSIVEEMEEVLAARE 140
>gi|302379675|ref|ZP_07268160.1| shikimate kinase [Finegoldia magna ACS-171-V-Col3]
gi|302312582|gb|EFK94578.1| shikimate kinase [Finegoldia magna ACS-171-V-Col3]
Length = 403
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 63/140 (45%), Gaps = 6/140 (4%)
Query: 92 KGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQ 151
K +V LVGM + K+ + K +A D D ++ + G + F E +++
Sbjct: 243 KNMNVALVGMPGSGKSTVAKIIAKNTGKKLVDIDKIITQRYG--DISDIFAAQGENYFRK 300
Query: 152 AETEVLKQLSSMGRLVVCAGNGAVQSSANLALL-RHGISLWIDVPPGMVARMDHSGFPES 210
E+EVL++ S LV+ G GAV N L ++ + WID P +++ + + +
Sbjct: 301 IESEVLEEFSKEKNLVIATGGGAVTVKKNFYYLHQNSVVYWIDRPNSKLSKKNRPIYKTN 360
Query: 211 ---EVLPQLFALYKEMRDGY 227
E+ LY+ D Y
Sbjct: 361 TMREIRQNRNYLYRRFSDKY 380
>gi|256425222|ref|YP_003125875.1| shikimate kinase [Chitinophaga pinensis DSM 2588]
gi|256040130|gb|ACU63674.1| Shikimate kinase [Chitinophaga pinensis DSM 2588]
Length = 170
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 2/99 (2%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+FL+G A KT+ GK LA+ L ++D D ++ E+ S + F E ++Q E
Sbjct: 3 IFLLGFMGAGKTYWGKQLAEHLSLPFYDLDDVIVESEAM-SISDIFATKGEDYFRQQENY 61
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALL-RHGISLWID 193
LK+LS V+ G GA N+ ++ +G ++W++
Sbjct: 62 WLKELSRNESFVISCGGGAPCFQDNMDIMNENGATIWLN 100
>gi|115312145|sp|Q47JK7.1|AROK_DECAR RecName: Full=Shikimate kinase; Short=SK
gi|71845478|gb|AAZ44974.1| shikimate kinase [Dechloromonas aromatica RCB]
Length = 183
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 59/116 (50%), Gaps = 2/116 (1%)
Query: 82 KKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAF 141
+ +A I+T +++LVG+ A KT +G+ LA L +FD+D + E G F
Sbjct: 4 QDSAKITTVEHRRNIYLVGLMGAGKTTVGRQLARRLSRPFFDTDHEIVERT-GVPIPTIF 62
Query: 142 RESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVPP 196
E+G+++ E + + L++ +V+ G G V + N L G ++++V P
Sbjct: 63 EIEGEEGFRRREAQTIYDLTAENNIVLATGGGVVINPENRRRLHDTGWVVYLNVSP 118
>gi|300087347|ref|YP_003757869.1| shikimate kinase [Dehalogenimonas lykanthroporepellens BL-DC-9]
gi|299527080|gb|ADJ25548.1| Shikimate kinase [Dehalogenimonas lykanthroporepellens BL-DC-9]
Length = 176
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 2/94 (2%)
Query: 94 TSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAE 153
+++ L+G + K+ +GK LA L + ++D LV EAAG + A FRES E +++ E
Sbjct: 3 SNIALIGFMGSGKSSVGKRLARRLGRDFLETDRLVEEAAGA-TIADIFRESGEGAFRELE 61
Query: 154 TEVLKQLSSMGR-LVVCAGNGAVQSSANLALLRH 186
V+K + R V+ G G + NL L+
Sbjct: 62 AGVIKNIGLTARNAVIACGGGIITRPENLENLKR 95
>gi|170724710|ref|YP_001758736.1| shikimate kinase I [Shewanella woodyi ATCC 51908]
gi|238688712|sp|B1KP71.1|AROK_SHEWM RecName: Full=Shikimate kinase; Short=SK
gi|169810057|gb|ACA84641.1| Shikimate kinase [Shewanella woodyi ATCC 51908]
Length = 171
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 77/169 (45%), Gaps = 21/169 (12%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L + DSD + E+ G A F E+G++ ET
Sbjct: 6 NIFLVGPMGAGKSTIGRHLAQMLHLEFHDSDQEI-ESRTGADIAWVFDVEGEEGFRIRET 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSA---NLALLRHGISLWIDVP-PGMVARMDHSGF--- 207
+V+ L+ +V+ G G++QS NL+ GI ++++ VAR
Sbjct: 65 QVVADLTEKQGIVLATGGGSIQSKEIRNNLSA--RGIVVYLETTIDKQVARTQRDKRRPL 122
Query: 208 ----PESEVLPQLFA----LYKEMRDGYATAD---VTVSLQKVASQLGY 245
EVL L A LY+E+ D D V ++ QLG+
Sbjct: 123 LQVEDPREVLENLAATRNPLYEEIADVIVKTDEQSAKVVANQIIEQLGF 171
>gi|296112091|ref|YP_003622473.1| shikimate kinase [Leuconostoc kimchii IMSNU 11154]
gi|339490693|ref|YP_004705198.1| shikimate kinase [Leuconostoc sp. C2]
gi|295833623|gb|ADG41504.1| shikimate kinase [Leuconostoc kimchii IMSNU 11154]
gi|338852365|gb|AEJ30575.1| shikimate kinase [Leuconostoc sp. C2]
Length = 266
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ LVG A KT +G+ +A + + D DS + E +S A+ F E G+++ ET
Sbjct: 7 TLMLVGFMGAGKTTVGREIARQHQSLFIDVDSEI-ERLANQSIAEIFVARGEAGFRELET 65
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRH 186
+VL ++ + +V G G V+ S NLA+L
Sbjct: 66 QVLSEVQTFNG-IVATGGGVVERSENLAILEQ 96
>gi|228476061|ref|ZP_04060769.1| shikimate kinase [Staphylococcus hominis SK119]
gi|228269884|gb|EEK11364.1| shikimate kinase [Staphylococcus hominis SK119]
Length = 169
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
+ L G K+ +G++LA L Y Y D D+ + E ++ F E EKG+++ E
Sbjct: 8 LILTGFMGTGKSTIGEYLASKLYYSYIDLDTYI-EMKEFKTIPDIFNEIGEKGFRKLEYN 66
Query: 156 VLKQLSSMGRL-VVCAGNGAVQSSANLALLRHGISLWIDVPPGMV 199
LK +G+ ++ G G +++ +++LL++ +W+D ++
Sbjct: 67 YLKD--CIGKYDIISTGGGIIENDDSISLLKNKTVIWLDCDIDII 109
>gi|312795822|ref|YP_004028744.1| shikimate kinase [Burkholderia rhizoxinica HKI 454]
gi|312167597|emb|CBW74600.1| Shikimate kinase (EC 2.7.1.71) [Burkholderia rhizoxinica HKI 454]
Length = 202
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
SVF +G+ A KT +G+ +A L + DSD + E G F E G++ E+
Sbjct: 14 SVFFIGLMGAGKTTVGRAVARRLARPFVDSDHEI-EVRTGARIPVIFEHEGEDGFRHRES 72
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPP 196
++ +L+ LV+ G GAV N L GI +++ P
Sbjct: 73 AIIDELTRRPGLVLATGGGAVMRPQNREWLHARGIVIYLRATP 115
>gi|260886338|ref|ZP_05897601.1| shikimate kinase [Selenomonas sputigena ATCC 35185]
gi|330839689|ref|YP_004414269.1| Shikimate kinase [Selenomonas sputigena ATCC 35185]
gi|260864057|gb|EEX78557.1| shikimate kinase [Selenomonas sputigena ATCC 35185]
gi|329747453|gb|AEC00810.1| Shikimate kinase [Selenomonas sputigena ATCC 35185]
Length = 176
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 58/117 (49%), Gaps = 9/117 (7%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+V L+G KT G+ LA L + D D ++ E AG S + F E ++ E
Sbjct: 3 NVVLIGFMGTGKTSTGRALAQRLGRAFVDLDRMIEEEAG-RSIPEIFASEGEAAFRALER 61
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRHG-----ISLWIDVPPGMVARMDHSG 206
E +++ + LV+ G G V+ +AN+ALL+ ++ +DV ++AR H G
Sbjct: 62 EAVRRTAKRRALVISTGGGTVKDAANVALLKENGAIICLTASVDV---VLARTAHVG 115
>gi|120600632|ref|YP_965206.1| shikimate kinase I [Shewanella sp. W3-18-1]
gi|146294789|ref|YP_001185213.1| shikimate kinase I [Shewanella putrefaciens CN-32]
gi|386315677|ref|YP_006011842.1| shikimate kinase [Shewanella putrefaciens 200]
gi|166219873|sp|A4YBT1.1|AROK_SHEPC RecName: Full=Shikimate kinase; Short=SK
gi|166219875|sp|A1RPQ7.1|AROK_SHESW RecName: Full=Shikimate kinase; Short=SK
gi|120560725|gb|ABM26652.1| shikimate kinase [Shewanella sp. W3-18-1]
gi|145566479|gb|ABP77414.1| shikimate kinase [Shewanella putrefaciens CN-32]
gi|319428302|gb|ADV56376.1| Shikimate kinase [Shewanella putrefaciens 200]
Length = 171
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L + DSD + E G A F E+G+++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRHLAQMLHLEFHDSDQEI-EQRTGADIAWVFDVEGEEGFRRREA 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSS 178
+V+ LS +V+ G G+VQS
Sbjct: 65 QVIADLSEKQGIVLATGGGSVQSK 88
>gi|305680814|ref|ZP_07403621.1| shikimate kinase [Corynebacterium matruchotii ATCC 14266]
gi|305659019|gb|EFM48519.1| shikimate kinase [Corynebacterium matruchotii ATCC 14266]
Length = 173
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
V LVG A KT +G+ LA L D+D ++ E A G++ F E E +++ E E
Sbjct: 8 VVLVGPPGAGKTTIGRRLAHTLNTVLIDTDHMI-EEATGKTCGAVFSELGEPEFRRLEAE 66
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDV 194
+ ++ R V+ G GAV + +N LL +WID+
Sbjct: 67 QVA-VALQQRGVISLGGGAVLTESNRNLLVDHPVVWIDM 104
>gi|90580859|ref|ZP_01236661.1| shikimate kinase I [Photobacterium angustum S14]
gi|90437930|gb|EAS63119.1| shikimate kinase I [Photobacterium angustum S14]
Length = 172
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L +FDSD+++ E G + + F E G++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRHLAQQLHMEFFDSDTVIEERTGAD-ISWVFDVEGEDGFRVREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
V+ L+ +V+ G G+V++ N L GI ++++
Sbjct: 65 GVIDDLTQEQGIVLATGGGSVKTKENRNRLSARGIVVYLE 104
>gi|126176298|ref|YP_001052447.1| shikimate kinase I [Shewanella baltica OS155]
gi|153002583|ref|YP_001368264.1| shikimate kinase I [Shewanella baltica OS185]
gi|160877304|ref|YP_001556620.1| shikimate kinase I [Shewanella baltica OS195]
gi|217975148|ref|YP_002359899.1| shikimate kinase I [Shewanella baltica OS223]
gi|336313223|ref|ZP_08568166.1| shikimate kinase I [Shewanella sp. HN-41]
gi|373951399|ref|ZP_09611360.1| Shikimate kinase [Shewanella baltica OS183]
gi|378710520|ref|YP_005275414.1| shikimate kinase [Shewanella baltica OS678]
gi|386322781|ref|YP_006018898.1| shikimate kinase [Shewanella baltica BA175]
gi|386343050|ref|YP_006039416.1| shikimate kinase [Shewanella baltica OS117]
gi|418022640|ref|ZP_12661626.1| Shikimate kinase [Shewanella baltica OS625]
gi|166219682|sp|A3DA15.1|AROK_SHEB5 RecName: Full=Shikimate kinase; Short=SK
gi|166219871|sp|A6WTR2.1|AROK_SHEB8 RecName: Full=Shikimate kinase; Short=SK
gi|189046336|sp|A9L695.1|AROK_SHEB9 RecName: Full=Shikimate kinase; Short=SK
gi|125999503|gb|ABN63578.1| shikimate kinase [Shewanella baltica OS155]
gi|151367201|gb|ABS10201.1| Shikimate kinase [Shewanella baltica OS185]
gi|160862826|gb|ABX51360.1| Shikimate kinase [Shewanella baltica OS195]
gi|217500283|gb|ACK48476.1| Shikimate kinase [Shewanella baltica OS223]
gi|315269509|gb|ADT96362.1| Shikimate kinase [Shewanella baltica OS678]
gi|333816926|gb|AEG09592.1| Shikimate kinase [Shewanella baltica BA175]
gi|334865451|gb|AEH15922.1| Shikimate kinase [Shewanella baltica OS117]
gi|335863343|gb|EGM68501.1| shikimate kinase I [Shewanella sp. HN-41]
gi|353537642|gb|EHC07198.1| Shikimate kinase [Shewanella baltica OS625]
gi|373887999|gb|EHQ16891.1| Shikimate kinase [Shewanella baltica OS183]
Length = 171
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L + DSD + E G A F E+G+++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRHLAQMLHLEFHDSDQEI-EQRTGADIAWVFDVEGEEGFRRREA 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSS 178
+V+ LS +V+ G G+VQS
Sbjct: 65 QVIADLSEKQGIVLATGGGSVQSK 88
>gi|387793517|ref|YP_006258582.1| shikimate kinase [Solitalea canadensis DSM 3403]
gi|379656350|gb|AFD09406.1| shikimate kinase [Solitalea canadensis DSM 3403]
Length = 167
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 2/107 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
VFL+G A KT GK LA L Y +FD D L+ E GG + + F E +++ E
Sbjct: 2 KVFLIGFMGAGKTTFGKKLAKNLNYPFFDLDHLIEEITGG-TVGEYFATHGEIKFRELEK 60
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALL-RHGISLWIDVPPGMVA 200
++L+ V+ G GA N+ + ++G ++++ + P +A
Sbjct: 61 DILQTHPFPENYVLSTGGGAPCFHDNMDWMNKNGQTIYLQLSPKALA 107
>gi|167625987|ref|YP_001676281.1| shikimate kinase I [Shewanella halifaxensis HAW-EB4]
gi|189046337|sp|B0TL77.1|AROK_SHEHH RecName: Full=Shikimate kinase; Short=SK
gi|167356009|gb|ABZ78622.1| Shikimate kinase [Shewanella halifaxensis HAW-EB4]
Length = 171
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L + DSD + E+ G A F E+G++ ET
Sbjct: 6 NIFLVGPMGAGKSTIGRHLAQMLHLEFHDSDQEI-ESRTGADIAWVFDVEGEEGFRNRET 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQS 177
+V+ L+ +V+ G G++QS
Sbjct: 65 QVVADLTEKQGIVLATGGGSIQS 87
>gi|392548746|ref|ZP_10295883.1| shikimate kinase I [Pseudoalteromonas rubra ATCC 29570]
Length = 172
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ +AD L +FDSD + E G + F E+G+++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRHIADQLHLEFFDSDQEI-ERRTGADISWVFDIEGEEGFRRREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQS-SANLALLRHGISLWIDVP 195
V+ L+ +V+ G G+V S L GI ++++ P
Sbjct: 65 TVISDLTEKQGIVLATGGGSVISKEVRNKLSARGIVVYLETP 106
>gi|315500432|ref|YP_004089235.1| shikimate kinase [Asticcacaulis excentricus CB 48]
gi|315418444|gb|ADU15084.1| Shikimate kinase [Asticcacaulis excentricus CB 48]
Length = 186
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
V LVG+ KT +G+ LA+AL + D+D + E A G S + F E G++ E +
Sbjct: 18 VALVGLMGVGKTTVGRRLAEALAVPFRDADEEI-EKAAGLSVSDIFAAFGEAGFRDGEQK 76
Query: 156 VLKQLSSMGRLVVCAGNGA-VQSSANLALLRHGISLWIDVPPGMVAR 201
V+ +L G ++ G GA VQ + + + + +++W+ ++AR
Sbjct: 77 VISRLLDDGPQILATGGGAFVQPATHDIIRQKAVTVWLKTDLRVIAR 123
>gi|254477061|ref|ZP_05090447.1| shikimate kinase [Ruegeria sp. R11]
gi|214031304|gb|EEB72139.1| shikimate kinase [Ruegeria sp. R11]
Length = 196
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 68/150 (45%), Gaps = 15/150 (10%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ +VGM A KT +G+ LA L + DSD + E A + + F E ++Q E
Sbjct: 23 TIVMVGMMGAGKTAVGRGLAARLDVPFLDSDHEI-EVAANRTIPEIFARDGEPFFRQKER 81
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALL-RHGISLW----IDVPPGMVARMD-----H 204
+V+ +L R V+ G GA + N + G+S+W +DV V D
Sbjct: 82 QVISRLLEEERGVLSTGGGAFLAEENRRTISEKGVSVWLKADLDVLWNRVKHRDTRPLLR 141
Query: 205 SGFPESEVLPQLFALYKEMRDGYATADVTV 234
+ P + L A+Y E YA AD+ V
Sbjct: 142 TADPHA----TLSAIYAERVPFYAQADLAV 167
>gi|456736951|gb|EMF61677.1| Shikimate kinase I [Stenotrophomonas maltophilia EPM1]
Length = 180
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 82/177 (46%), Gaps = 27/177 (15%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L+G A KT +G+ LA+ + D D + +AAG S F S E G++ E
Sbjct: 6 NLILIGPMGAGKTCIGRRLAERFTLDFVDVDQAIVDAAGA-SIPTIFEHSGEAGFRSHER 64
Query: 155 EVL-KQLSSMGRLVVCAGNGAVQSSANLALL-RHGISLWIDVPPGMVARMDH----SGFP 208
E L + L G+L V G GAV N AL+ + G +++ V + A+++ G P
Sbjct: 65 EALARVLEGRGQL-VSTGGGAVLDPGNRALIAQRGFVVYLRV--SVTAQLERLARDKGRP 121
Query: 209 ------ESEVLPQLFA----LYKEM------RDGYATADVTVSL-QKVASQLGYDDL 248
+VL L A LY+E+ D Y AD T L K+A+Q DL
Sbjct: 122 LLQRPDREQVLHDLAAHRDPLYRELADITLDTDPYTAADATAHLVVKLATQWQRQDL 178
>gi|117922326|ref|YP_871518.1| shikimate kinase I [Shewanella sp. ANA-3]
gi|166219874|sp|A0L243.1|AROK_SHESA RecName: Full=Shikimate kinase; Short=SK
gi|117614658|gb|ABK50112.1| shikimate kinase [Shewanella sp. ANA-3]
Length = 171
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L + DSD + E G A F E+G+++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRHLAQMLHLEFHDSDQEI-EQRTGADIAWVFDVEGEEGFRRREA 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSS 178
+V+ LS +V+ G G+VQS
Sbjct: 65 QVIADLSEKQGIVLATGGGSVQSK 88
>gi|313677795|ref|YP_004055791.1| shikimate kinase [Marivirga tractuosa DSM 4126]
gi|312944493|gb|ADR23683.1| Shikimate kinase [Marivirga tractuosa DSM 4126]
Length = 172
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 71/145 (48%), Gaps = 11/145 (7%)
Query: 97 FLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEV 156
FL+G+ + K+H G+ + L+ +FD D ++ E G S + F+ E+ ++ ET
Sbjct: 4 FLLGLPGSGKSHWGRIWSKKLKLPFFDLDEVIVENEGN-SINEIFKNEGEEHFRNLETFY 62
Query: 157 LKQL-SSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVPPGMVARMDHSGFPESEVLP 214
L++L ++ L++ G G NL L+ GIS++++ P +A + P +
Sbjct: 63 LQKLIANYSSLILSTGGGTPCFRDNLLLMNEKGISIFLNPPIEEIA--NRVWNPNEIIKR 120
Query: 215 QLFALYKEMRDGYATADVTVSLQKV 239
LF+ D + DV LQ++
Sbjct: 121 PLFS------DCNSIKDVQEVLQRL 139
>gi|329851120|ref|ZP_08265877.1| shikimate kinase family protein [Asticcacaulis biprosthecum C19]
gi|328839966|gb|EGF89538.1| shikimate kinase family protein [Asticcacaulis biprosthecum C19]
Length = 194
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+V LVG+ KT +GK LA+ + D+D + E A G+S A F EKG++ E
Sbjct: 24 TVALVGLMGVGKTTIGKRLAEHFALPFVDADEEI-EKAAGQSVADIFAHYGEKGFRDGEE 82
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWI 192
V+ +L ++ G GA+ S+ L+ I++W+
Sbjct: 83 RVISRLLDSPPQILATGGGALTSAKTRENLKAKAITVWL 121
>gi|254501848|ref|ZP_05113999.1| shikimate kinase [Labrenzia alexandrii DFL-11]
gi|222437919|gb|EEE44598.1| shikimate kinase [Labrenzia alexandrii DFL-11]
Length = 205
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 2/101 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
S+ LVG+ K+ +GK LA L + D+DS + E A + ++ F E E ++ E
Sbjct: 35 SIVLVGIMGCGKSTVGKRLAQRLGLEFVDADSEI-ERAANMTVSEIFSEHGEPYFRSGEE 93
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDV 194
V+ +L G V+ G GA S A + + +G+S+W+ V
Sbjct: 94 RVIARLLQEGPQVLATGGGAFISDATRSEIETNGLSIWLKV 134
>gi|254525029|ref|ZP_05137084.1| shikimate kinase [Stenotrophomonas sp. SKA14]
gi|219722620|gb|EED41145.1| shikimate kinase [Stenotrophomonas sp. SKA14]
Length = 180
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 83/179 (46%), Gaps = 27/179 (15%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L+G A KT +G+ LA+ + D D + +AAG S F S E G++ E
Sbjct: 6 NLILIGPMGAGKTCIGRRLAERFTLDFVDVDQAIVDAAGA-SIPTIFEHSGEAGFRSHER 64
Query: 155 EVLKQ-LSSMGRLVVCAGNGAVQSSANLALL-RHGISLWIDVPPGMVARMDH----SGFP 208
E L L G+L V G GAV + N AL+ + G +++ V + A+++ G P
Sbjct: 65 EALAHVLEGQGQL-VSTGGGAVLDADNRALIAQRGFVVYLRV--SVAAQLERLARDKGRP 121
Query: 209 ------ESEVLPQLFA----LYKEM------RDGYATADVTVSL-QKVASQLGYDDLDA 250
+VL L A LY+E+ D Y AD T L K+A+Q DL A
Sbjct: 122 LLQRPDREQVLHDLAAHRDPLYRELADLTLDTDPYTAADATAQLVVKLATQWQRQDLTA 180
>gi|24371884|ref|NP_715926.1| shikimate kinase AroK [Shewanella oneidensis MR-1]
gi|38604873|sp|Q8EK20.1|AROK_SHEON RecName: Full=Shikimate kinase; Short=SK
gi|24345710|gb|AAN53371.1| shikimate kinase AroK [Shewanella oneidensis MR-1]
Length = 171
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L + DSD + E G A F E+G+++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRHLAQMLHLEFHDSDQEI-EQRTGADIAWVFDVEGEEGFRRREA 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSS 178
+V+ LS +V+ G G+VQS
Sbjct: 65 QVIADLSEKQGIVLATGGGSVQSK 88
>gi|220936187|ref|YP_002515086.1| Shikimate kinase [Thioalkalivibrio sulfidophilus HL-EbGr7]
gi|254806785|sp|B8GPV2.1|AROK_THISH RecName: Full=Shikimate kinase; Short=SK
gi|219997497|gb|ACL74099.1| Shikimate kinase [Thioalkalivibrio sulfidophilus HL-EbGr7]
Length = 190
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 94 TSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAE 153
+++ L+G A K+ +G+ LA AL + DSD + E G F E+G++ E
Sbjct: 5 SNIILIGPMGAGKSTIGRQLAAALHLPFRDSDKEI-EKRTGVDIPTIFEFEGEEGFRNRE 63
Query: 154 TEVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWI 192
+ +L++L + +V+ G GAV N ALLR G+ +++
Sbjct: 64 SAMLEELCTEQGIVLATGGGAVMRPQNRALLRDCGLVVYL 103
>gi|113972025|ref|YP_735818.1| shikimate kinase I [Shewanella sp. MR-4]
gi|114045759|ref|YP_736309.1| shikimate kinase I [Shewanella sp. MR-7]
gi|123130013|sp|Q0HDV6.1|AROK_SHESM RecName: Full=Shikimate kinase; Short=SK
gi|123131834|sp|Q0I053.1|AROK_SHESR RecName: Full=Shikimate kinase; Short=SK
gi|113886709|gb|ABI40761.1| shikimate kinase [Shewanella sp. MR-4]
gi|113887201|gb|ABI41252.1| shikimate kinase [Shewanella sp. MR-7]
Length = 171
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L + DSD + E G A F E+G+++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRHLAQMLHLEFHDSDQEI-EQRTGADIAWVFDVEGEEGFRRREA 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSS 178
+V+ LS +V+ G G+VQS
Sbjct: 65 QVIADLSEKQGIVLATGGGSVQSK 88
>gi|437999651|ref|YP_007183384.1| shikimate kinase [Candidatus Kinetoplastibacterium blastocrithidii
(ex Strigomonas culicis)]
gi|451813274|ref|YP_007449727.1| shikimate kinase [Candidatus Kinetoplastibacterium blastocrithidii
TCC012E]
gi|429338885|gb|AFZ83307.1| shikimate kinase [Candidatus Kinetoplastibacterium blastocrithidii
(ex Strigomonas culicis)]
gi|451779243|gb|AGF50123.1| shikimate kinase [Candidatus Kinetoplastibacterium blastocrithidii
TCC012E]
Length = 211
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 15/146 (10%)
Query: 94 TSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAE 153
T +FL+GM + KT +G+ L+ L + D D L E+ G S F E G+++ E
Sbjct: 39 TPIFLIGMMGSGKTTIGRNLSSILDRKFIDLD-LAIESRCGVSIPTIFEIEGESGFRKRE 97
Query: 154 TEVLKQLSSMGRLVVCAGNGAVQSSANLALL-RHGISLW-------------IDVPPGMV 199
VL S+ V+ G GAV S +N +L + GI ++ +D ++
Sbjct: 98 EIVLLDCSNEINTVLATGGGAVLSHSNRDVLKKRGIVVYFQASLDDLFQRTNLDSNRPLL 157
Query: 200 ARMDHSGFPESEVLPQLFALYKEMRD 225
+ D E+L Q +YKE+ D
Sbjct: 158 SNTDKPYAILRELLEQREPIYKEVAD 183
>gi|425054544|ref|ZP_18458049.1| shikimate kinase [Enterococcus faecium 505]
gi|403035496|gb|EJY46882.1| shikimate kinase [Enterococcus faecium 505]
Length = 169
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
S+ L+G A KT +GK LA L+ Y D D+ + E S A+ F E +++ E+
Sbjct: 3 SILLIGFMGAGKTTIGKGLAQRLQKEYVDLDTKIEEHIQL-SIAEYFHYYGENSFRKVES 61
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR 185
+VL++LS+ + ++ G G VQ +AN L+
Sbjct: 62 KVLRKLSNEDK-IIATGGGIVQCAANRQFLQ 91
>gi|127511147|ref|YP_001092344.1| shikimate kinase I [Shewanella loihica PV-4]
gi|166219872|sp|A3Q9D7.1|AROK_SHELP RecName: Full=Shikimate kinase; Short=SK
gi|126636442|gb|ABO22085.1| shikimate kinase [Shewanella loihica PV-4]
Length = 171
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L + DSD + E G A F E+G+++ ET
Sbjct: 6 NIFLVGPMGAGKSTIGRHLAQMLHLEFHDSDQEI-ENRTGADIAWVFDVEGEEGFRRRET 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSS 178
+V+ L+ +V+ G G++QS
Sbjct: 65 QVVADLTEKQGIVLATGGGSIQSK 88
>gi|167855589|ref|ZP_02478349.1| shikimate kinase [Haemophilus parasuis 29755]
gi|167853280|gb|EDS24534.1| shikimate kinase [Haemophilus parasuis 29755]
Length = 173
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FL+G A K+ +G+ LA L + DSD+++ E AG + F E G+++ E
Sbjct: 6 NIFLIGPMGAGKSTIGRQLAQMLNMDFLDSDAVIEERAGAD-IDWIFDIEGETGFRKREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWID 193
++ +L+ LV+ G G+V S N +L GI ++++
Sbjct: 65 RIINELTQSQGLVLSTGGGSVLSKDNRNVLSARGIVVYLE 104
>gi|157377397|ref|YP_001475997.1| shikimate kinase I [Shewanella sediminis HAW-EB3]
gi|189046339|sp|A8G196.1|AROK_SHESH RecName: Full=Shikimate kinase; Short=SK
gi|157319771|gb|ABV38869.1| Shikimate kinase [Shewanella sediminis HAW-EB3]
Length = 171
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 77/169 (45%), Gaps = 21/169 (12%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L + DSD + E+ G A F E+G++ ET
Sbjct: 6 NIFLVGPMGAGKSTIGRHLAQMLHLDFHDSDQEI-ESRTGADIAWVFDVEGEEGFRVRET 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSA---NLALLRHGISLWIDVP-PGMVARMDHSGF--- 207
+V+ L+ +V+ G G++QS NL+ GI ++++ VAR
Sbjct: 65 QVVADLTEKQGIVLATGGGSIQSKEIRNNLSA--RGIVVYLETTIDKQVARTQRDKRRPL 122
Query: 208 ----PESEVLPQLFA----LYKEMRDGYATAD---VTVSLQKVASQLGY 245
EVL L A LY+E+ D D V ++ QLG+
Sbjct: 123 LQVDDPREVLENLAATRNPLYEEIADVIVKTDEQSAKVVANQIIEQLGF 171
>gi|354501386|ref|XP_003512773.1| PREDICTED: threonine synthase-like 1-like [Cricetulus griseus]
gi|344258092|gb|EGW14196.1| Threonine synthase-like 1 [Cricetulus griseus]
Length = 747
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 82/174 (47%), Gaps = 16/174 (9%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L+G A KT +G+ + L D D + E SA++ ++ + + + E
Sbjct: 57 NIILMGPPGAGKTTVGRIIGHKLGCCVIDVDDDILEKTWNMSASEKLQDVGNEQFLEEEG 116
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVP-PGMVARM----------D 203
+ + LS+ G ++ +G+ + ++ L ++GI +++DVP +++R+
Sbjct: 117 KAILNLSASGSVISLSGSNPMHDASMWHLKKNGIVVYLDVPLVDIISRLKSMKIDRIVGQ 176
Query: 204 HSGFPESEVLPQLFALYKEMRDGYATADVTVSLQKVASQL-----GYDDLDAVT 252
+SG P ++L YK+ D + S ++VA ++ Y D+D+ T
Sbjct: 177 NSGTPMRDLLKHRRLCYKKWYDARVFCESGASPEEVADKVLDVVKRYQDVDSET 230
>gi|293556181|ref|ZP_06674771.1| shikimate kinase [Enterococcus faecium E1039]
gi|291601600|gb|EFF31862.1| shikimate kinase [Enterococcus faecium E1039]
Length = 169
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
S+ L+G A KT +GK LA L+ Y D D+ + E S A+ F E +++ E+
Sbjct: 3 SILLIGFMGAGKTTIGKGLAQRLQKEYVDLDTKIEEHIQL-SIAEYFHYYGENSFRKVES 61
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR 185
+VL++LS+ + ++ G G VQ +AN L+
Sbjct: 62 KVLRKLSNEDK-IIATGGGIVQCAANRQFLQ 91
>gi|71279819|ref|YP_267230.1| shikimate kinase [Colwellia psychrerythraea 34H]
gi|115312144|sp|Q489N4.1|AROK_COLP3 RecName: Full=Shikimate kinase; Short=SK
gi|71145559|gb|AAZ26032.1| shikimate kinase [Colwellia psychrerythraea 34H]
Length = 172
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FL+G A K+ +G+ +AD L +FDSD + E G A F E+G+++ E
Sbjct: 6 NIFLIGPMGAGKSTIGREIADRLHLEFFDSDQEI-ERRTGADIAWVFDLEGEEGFRKREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSS 178
V++ LS +V+ G G+V S+
Sbjct: 65 TVIEDLSEKHGIVLATGGGSVIST 88
>gi|254787477|ref|YP_003074906.1| shikimate kinase [Teredinibacter turnerae T7901]
gi|237684559|gb|ACR11823.1| shikimate kinase [Teredinibacter turnerae T7901]
Length = 169
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
VFLVG A K+ +G+ LA L + D+D V EA G F E G++ ET
Sbjct: 5 VFLVGPMGAGKSTIGRMLAQRLEAEFHDTDQ-VIEARTGADIPWIFDVEGEAGFRDRETS 63
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLR 185
VL L+ +V+ G G V N +L+
Sbjct: 64 VLDDLAQYQDVVIATGGGIVTREQNRHILQ 93
>gi|119470431|ref|ZP_01613159.1| shikimate kinase I [Alteromonadales bacterium TW-7]
gi|392539876|ref|ZP_10287013.1| shikimate kinase I [Pseudoalteromonas marina mano4]
gi|119446356|gb|EAW27632.1| shikimate kinase I [Alteromonadales bacterium TW-7]
Length = 172
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FL+G A K+ +G+ +AD L + DSD + E G A F E+G++ E
Sbjct: 6 NIFLIGPMGAGKSTIGRHIADQLHLEFVDSDQEI-ERRTGADIAWVFDLEGEEGFRLREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQS-SANLALLRHGISLWIDVP 195
V+ L+ M +V+ G G+V S L GI ++++ P
Sbjct: 65 SVIGDLTEMQGIVLATGGGSVMSKEVRNKLSARGIVVYLETP 106
>gi|91974774|ref|YP_567433.1| shikimate kinase [Rhodopseudomonas palustris BisB5]
gi|91681230|gb|ABE37532.1| shikimate kinase [Rhodopseudomonas palustris BisB5]
Length = 204
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 61/127 (48%), Gaps = 2/127 (1%)
Query: 76 PSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGE 135
P+ A + + A+I L +V L+GM A K+ +G+ LA L + D+D+ + E+A
Sbjct: 7 PADAARSQEAEIVAALGERAVVLIGMMGAGKSTVGRRLALRLGLPFLDADTEI-ESAAAM 65
Query: 136 SAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDV 194
+ + F E ++ E V+ +L G V+ G GA +R +SLW++
Sbjct: 66 TIPEIFDTHGEPHFRDGEARVIARLLDGGAKVLATGGGAFMREETRDRIRDKAVSLWLEA 125
Query: 195 PPGMVAR 201
++ R
Sbjct: 126 DADVILR 132
>gi|421505354|ref|ZP_15952292.1| shikimate kinase [Pseudomonas mendocina DLHK]
gi|400343763|gb|EJO92135.1| shikimate kinase [Pseudomonas mendocina DLHK]
Length = 172
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+V LVG A K+ +G+ LA LR + DSD + E G F E+G+++ E
Sbjct: 3 NVILVGPMGAGKSTIGRLLAKELRLPFKDSDKEI-EQRTGADIPWIFDVEGEQGFREREQ 61
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRHG 187
V+ +LS LV+ G GAV N L G
Sbjct: 62 AVIAELSMQDGLVLATGGGAVMRPENRQALHAG 94
>gi|393764153|ref|ZP_10352765.1| shikimate kinase I [Alishewanella agri BL06]
gi|392604783|gb|EIW87682.1| shikimate kinase I [Alishewanella agri BL06]
Length = 172
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 76/163 (46%), Gaps = 16/163 (9%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA+ L ++DSD + E G A F E G++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRHLAEMLHLEFYDSDQEI-ERRTGADIAWVFDLEGEAGFRVREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVP-PGMVARMD--------H 204
V++ L+ + +V+ G G+V S L GI ++++ P VAR
Sbjct: 65 NVIQDLTELQGIVLATGGGSVLSKETRNRLSARGIVVYLETPIEKQVARTQRDKKRPLLQ 124
Query: 205 SGFPESEVLPQLFA----LYKEMRDGYATADVTVSLQKVASQL 243
+ EVL +L A LY E+ D D S + VA+Q+
Sbjct: 125 TKEEPKEVLERLAAERNPLYAEIADFTVRTD-EQSARSVANQI 166
>gi|160935634|ref|ZP_02083009.1| hypothetical protein CLOBOL_00524 [Clostridium bolteae ATCC
BAA-613]
gi|158441378|gb|EDP19088.1| hypothetical protein CLOBOL_00524 [Clostridium bolteae ATCC
BAA-613]
Length = 469
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 7/122 (5%)
Query: 77 SFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGES 136
++ KK+A E +G ++ L+G A K+ +G+ A + D+D + EAA G +
Sbjct: 285 NYLQKKQAG----EGRGDNLILIGFMGAGKSRVGEHFAARYQMPIIDTDKEI-EAAAGMA 339
Query: 137 AAKAFRESDEKGYQQAETEVL-KQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDV 194
+ F E+ +++ ET VL K L GR V+ G G N ALL+ G +++DV
Sbjct: 340 ISDIFATQGEEAFRRLETGVLEKLLEQGGRSVISVGGGLPLREENRALLKQLGTVVYLDV 399
Query: 195 PP 196
P
Sbjct: 400 LP 401
>gi|420257456|ref|ZP_14760214.1| shikimate kinase II [Yersinia enterocolitica subsp. enterocolitica
WA-314]
gi|404515105|gb|EKA28882.1| shikimate kinase II [Yersinia enterocolitica subsp. enterocolitica
WA-314]
Length = 174
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 14/169 (8%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++F+VG A KT +GK LA AL Y + D+D L + S A+ G++ E+
Sbjct: 4 TIFMVGARGAGKTTIGKALAQALGYRFIDTD-LFMQQTLQSSVAEIVAREGWDGFRLRES 62
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMVA-RMDHSGFPESEV 212
L+ +++ + VV G GAV S N +R HG+ +++ ++A R+ PE
Sbjct: 63 MALQTVTA-PKTVVATGGGAVLSHDNRTFMRQHGMVIYLRASANVLAERLAED--PEDAQ 119
Query: 213 LPQLFA--LYKEMRDGYATADVTVSLQKVASQLGYDDLDAVTTEDMTLE 259
P L + +EM DV S + + ++ + LDA + +E
Sbjct: 120 RPSLTGKPIVEEM------LDVLASREPLYQEVAHHVLDATQPPEEVVE 162
>gi|421523538|ref|ZP_15970167.1| shikimate kinase [Pseudomonas putida LS46]
gi|402752524|gb|EJX13029.1| shikimate kinase [Pseudomonas putida LS46]
Length = 172
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ LVG A K+ +G+ LA LR + DSD + E G + F + E G++ E
Sbjct: 3 NLILVGPMGAGKSTIGRLLAKELRLLFKDSDKEI-ELRCGANIPWIFDKEGEPGFRDREQ 61
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRHG 187
++ +L ++ +V+ G GAV AN L G
Sbjct: 62 AMIAELCALDGVVLATGGGAVMREANRQALHQG 94
>gi|86359409|ref|YP_471301.1| shikimate kinase [Rhizobium etli CFN 42]
gi|86283511|gb|ABC92574.1| shikimate kinase protein [Rhizobium etli CFN 42]
Length = 195
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 83/181 (45%), Gaps = 8/181 (4%)
Query: 75 DPSFAVKKKAADISTELKGT-SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAG 133
DP V D + G+ ++ LVG+ A K+ +G+ +A L + DSD + E
Sbjct: 3 DPLLTVANSLKDRARAALGSRNLVLVGLMGAGKSSVGRIVASQLGIPFIDSDHEI-ERVS 61
Query: 134 GESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGA-VQSSANLALLRHGISLW- 191
+ A+ F E+ ++ ET V+K+L G VV G GA + + + G+S+W
Sbjct: 62 RMTIAELFAAYGEEEFRALETRVMKRLLKSGPRVVSTGGGAFINGRTRRHIKKGGLSIWL 121
Query: 192 ---IDVPPGMVARMDHSGFPESEVLPQ-LFALYKEMRDGYATADVTVSLQKVASQLGYDD 247
+DV V + D ++E Q L L YA AD+TV + V ++ D+
Sbjct: 122 KADLDVLWERVNKRDTRPLLKTENPKQTLENLMNARYPIYAQADLTVISRDVRKEIMADE 181
Query: 248 L 248
+
Sbjct: 182 V 182
>gi|331006526|ref|ZP_08329823.1| Shikimate kinase I [gamma proteobacterium IMCC1989]
gi|330419662|gb|EGG94031.1| Shikimate kinase I [gamma proteobacterium IMCC1989]
Length = 175
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 94 TSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAE 153
V LVG A K+ +G+ LA+ L + DSD ++ E +G + F E+G++ E
Sbjct: 8 NKVALVGPMGAGKSTIGRLLANCLSLPFHDSDHVIEEKSGAD-IPWIFDVEGEEGFRDRE 66
Query: 154 TEVLKQLSSMGRLVVCAGNGAVQSSANLALLRH 186
T VL+ L ++V+ G G V N LL+
Sbjct: 67 TAVLESLLEEQKVVIATGGGIVLREKNRQLLQQ 99
>gi|227551646|ref|ZP_03981695.1| shikimate kinase [Enterococcus faecium TX1330]
gi|257884433|ref|ZP_05664086.1| shikimate kinase [Enterococcus faecium 1,231,501]
gi|257887216|ref|ZP_05666869.1| shikimate kinase [Enterococcus faecium 1,141,733]
gi|257895753|ref|ZP_05675406.1| shikimate kinase [Enterococcus faecium Com12]
gi|257898323|ref|ZP_05677976.1| shikimate kinase [Enterococcus faecium Com15]
gi|293377636|ref|ZP_06623825.1| shikimate kinase [Enterococcus faecium PC4.1]
gi|293571830|ref|ZP_06682846.1| shikimate kinase [Enterococcus faecium E980]
gi|431032995|ref|ZP_19490841.1| shikimate kinase [Enterococcus faecium E1590]
gi|431106103|ref|ZP_19497260.1| shikimate kinase [Enterococcus faecium E1613]
gi|431737574|ref|ZP_19526527.1| shikimate kinase [Enterococcus faecium E1972]
gi|431740004|ref|ZP_19528923.1| shikimate kinase [Enterococcus faecium E2039]
gi|431752012|ref|ZP_19540698.1| shikimate kinase [Enterococcus faecium E2620]
gi|431756827|ref|ZP_19545459.1| shikimate kinase [Enterococcus faecium E3083]
gi|431762053|ref|ZP_19550615.1| shikimate kinase [Enterococcus faecium E3548]
gi|227179209|gb|EEI60181.1| shikimate kinase [Enterococcus faecium TX1330]
gi|257820271|gb|EEV47419.1| shikimate kinase [Enterococcus faecium 1,231,501]
gi|257823270|gb|EEV50202.1| shikimate kinase [Enterococcus faecium 1,141,733]
gi|257832318|gb|EEV58739.1| shikimate kinase [Enterococcus faecium Com12]
gi|257836235|gb|EEV61309.1| shikimate kinase [Enterococcus faecium Com15]
gi|291608084|gb|EFF37390.1| shikimate kinase [Enterococcus faecium E980]
gi|292643636|gb|EFF61757.1| shikimate kinase [Enterococcus faecium PC4.1]
gi|430564096|gb|ELB03280.1| shikimate kinase [Enterococcus faecium E1590]
gi|430569635|gb|ELB08625.1| shikimate kinase [Enterococcus faecium E1613]
gi|430598661|gb|ELB36396.1| shikimate kinase [Enterococcus faecium E1972]
gi|430604131|gb|ELB41631.1| shikimate kinase [Enterococcus faecium E2039]
gi|430614621|gb|ELB51601.1| shikimate kinase [Enterococcus faecium E2620]
gi|430620681|gb|ELB57483.1| shikimate kinase [Enterococcus faecium E3083]
gi|430624745|gb|ELB61395.1| shikimate kinase [Enterococcus faecium E3548]
Length = 169
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
S+ L+G A KT +GK LA L+ Y D D+ + E S A+ F E +++ E+
Sbjct: 3 SILLIGFMGAGKTTIGKGLAQRLQKEYVDLDTKIEEHIQL-SIAEYFHYYGENSFRKVES 61
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR 185
+VL++LS+ + ++ G G VQ +AN L+
Sbjct: 62 KVLRKLSNEDK-IIATGGGIVQCAANRQFLQ 91
>gi|381396111|ref|ZP_09921803.1| shikimate kinase [Glaciecola punicea DSM 14233 = ACAM 611]
gi|379328291|dbj|GAB56936.1| shikimate kinase [Glaciecola punicea DSM 14233 = ACAM 611]
Length = 171
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+VFLVG A K+ +G+ LAD L +FDSD + E G A F E G+++ E
Sbjct: 6 NVFLVGPMGAGKSTIGRHLADELHLEFFDSDQEI-ERRTGADIAWIFDLEGEDGFRKREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSA 179
++ L+ +V+ G G++ S A
Sbjct: 65 TIIHDLTDKQGIVLATGGGSIVSKA 89
>gi|417791078|ref|ZP_12438571.1| hypothetical protein CSE899_10677 [Cronobacter sakazakii E899]
gi|449309285|ref|YP_007441641.1| shikimate kinase II [Cronobacter sakazakii SP291]
gi|333954821|gb|EGL72630.1| hypothetical protein CSE899_10677 [Cronobacter sakazakii E899]
gi|449099318|gb|AGE87352.1| shikimate kinase II [Cronobacter sakazakii SP291]
Length = 174
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 64/123 (52%), Gaps = 6/123 (4%)
Query: 96 VFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETE 155
++L+G KT G+ LA AL Y + D+D + E + A+ + G++ E+E
Sbjct: 5 IYLIGARGCGKTTTGEALARALAYGFADTDRWLREHTQ-MTVAEVVEKEGWPGFRARESE 63
Query: 156 VLKQLSSMGRLVVCAGNGAVQSSANLALLR-HGISLWIDVPPGMVA-RMDHSGFPESEVL 213
L+ +++ VV G G V N +R HG+ ++++VP ++A R++ FPE+
Sbjct: 64 ALQAVTAPA-TVVATGGGMVLRDENREFMRAHGVVIYLNVPVEVLAQRLE--AFPEAGQR 120
Query: 214 PQL 216
P L
Sbjct: 121 PTL 123
>gi|289207465|ref|YP_003459531.1| shikimate kinase [Thioalkalivibrio sp. K90mix]
gi|288943096|gb|ADC70795.1| Shikimate kinase [Thioalkalivibrio sp. K90mix]
Length = 180
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ LVG A K+ +G+ LA LR +FD+D + + G F E G+++ E+
Sbjct: 3 NIVLVGPMGAGKSTIGRGLAGLLRRPFFDTDQEI-QRRTGVDIPTIFEFEGEAGFRKRES 61
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVP 195
+L+ L +V+ G G V+ N LR +++ VP
Sbjct: 62 AMLESLLERDGIVIATGGGIVERPENRERLREHFVIYLRVP 102
>gi|212697036|ref|ZP_03305164.1| hypothetical protein ANHYDRO_01601 [Anaerococcus hydrogenalis DSM
7454]
gi|212675811|gb|EEB35418.1| hypothetical protein ANHYDRO_01601 [Anaerococcus hydrogenalis DSM
7454]
Length = 346
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 78/153 (50%), Gaps = 9/153 (5%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L+GM + KT LG+ LA+ ++ + D D L FE G + + F+ E ++ E+
Sbjct: 189 NIALIGMPGSGKTSLGRILAENMKRNFIDLD-LEFEKKYG-NIEEFFKNYGEDKFRDKES 246
Query: 155 EVLKQLSSM-GRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVARMDHSGFPESEV- 212
++LK+ S G+++ C G G V+ N L+ S+ ++V + ++ G P S+
Sbjct: 247 QILKEFSKKTGQIISCGG-GIVEKEENYYRLKEN-SIIVNVKRDL-ENLEIEGRPLSKKY 303
Query: 213 -LPQLFALYKEMRDGYATADV-TVSLQKVASQL 243
L L+ K++ D + +V L K A ++
Sbjct: 304 DLDFLYNKRKDLYDKFKDLEVYNTDLDKCAKEI 336
>gi|26991755|ref|NP_747180.1| shikimate kinase [Pseudomonas putida KT2440]
gi|148550154|ref|YP_001270256.1| shikimate kinase [Pseudomonas putida F1]
gi|37999606|sp|Q88CV1.1|AROK_PSEPK RecName: Full=Shikimate kinase; Short=SK
gi|166219254|sp|A5WAB2.1|AROK_PSEP1 RecName: Full=Shikimate kinase; Short=SK
gi|24986863|gb|AAN70644.1|AE016708_5 shikimate kinase [Pseudomonas putida KT2440]
gi|148514212|gb|ABQ81072.1| shikimate kinase [Pseudomonas putida F1]
Length = 172
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ LVG A K+ +G+ LA LR + DSD + E G + F + E G++ E
Sbjct: 3 NLILVGPMGAGKSTIGRLLAKELRLLFKDSDKEI-ELRCGANIPWIFDKEGEPGFRDREQ 61
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRHG 187
++ +L ++ +V+ G GAV AN L G
Sbjct: 62 AMIAELCALDGVVLATGGGAVMREANRQALHQG 94
>gi|350565507|ref|ZP_08934267.1| shikimate dehydrogenase [Peptoniphilus indolicus ATCC 29427]
gi|348663713|gb|EGY80266.1| shikimate dehydrogenase [Peptoniphilus indolicus ATCC 29427]
Length = 403
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 14/123 (11%)
Query: 83 KAADISTE-------------LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVF 129
KAA+I TE +K ++ LVGM ++ K+ + +A+ + + D D L
Sbjct: 219 KAAEIFTETKIENIREITSEMMKQENIVLVGMPDSGKSSIAPLIAEKMSREFVDLD-LEI 277
Query: 130 EAAGGESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGIS 189
E GE F++ E +++ ETEV K+ + LV+ G G V N L+
Sbjct: 278 EKFSGEKIDDIFKKYGEAKFREMETEVCKKFGKLNGLVISTGGGVVIREENYQPLKQNGK 337
Query: 190 LWI 192
+++
Sbjct: 338 IYL 340
>gi|424765959|ref|ZP_18193321.1| shikimate kinase [Enterococcus faecium TX1337RF]
gi|402412966|gb|EJV45317.1| shikimate kinase [Enterococcus faecium TX1337RF]
Length = 169
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
S+ L+G A KT +GK LA L+ Y D D+ + E S A+ F E +++ E+
Sbjct: 3 SILLIGFMGAGKTTIGKGLAQRLQKEYVDLDTKIEEHIQL-SIAEYFHYYGENSFRKVES 61
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLR 185
+VL++LS+ + ++ G G VQ +AN L+
Sbjct: 62 KVLRKLSNEDK-IIATGGGIVQCAANRQFLQ 91
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.129 0.360
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,981,003,975
Number of Sequences: 23463169
Number of extensions: 146246868
Number of successful extensions: 473878
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 464
Number of HSP's successfully gapped in prelim test: 2181
Number of HSP's that attempted gapping in prelim test: 472135
Number of HSP's gapped (non-prelim): 2696
length of query: 278
length of database: 8,064,228,071
effective HSP length: 140
effective length of query: 138
effective length of database: 9,074,351,707
effective search space: 1252260535566
effective search space used: 1252260535566
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 76 (33.9 bits)