Query 023751
Match_columns 278
No_of_seqs 134 out of 721
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 12:10:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023751.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023751hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1fll_X B-cell surface antigen 52.9 7.4 0.00025 22.0 1.7 11 245-255 6-16 (26)
2 4h08_A Putative hydrolase; GDS 51.3 34 0.0012 27.3 6.4 52 93-166 73-124 (200)
3 3dc7_A Putative uncharacterize 37.0 1.2E+02 0.0041 24.5 7.7 58 197-270 163-222 (232)
4 3r6w_A FMN-dependent NADH-azor 36.5 14 0.00047 30.6 1.7 22 87-108 80-101 (212)
5 1yzf_A Lipase/acylhydrolase; s 30.2 79 0.0027 24.3 5.3 123 93-270 66-188 (195)
6 3dci_A Arylesterase; SGNH_hydr 26.1 2.2E+02 0.0075 23.0 7.6 34 131-164 122-158 (232)
7 4hf7_A Putative acylhydrolase; 25.6 12 0.0004 30.6 -0.6 30 132-165 101-130 (209)
8 1oeg_A Apolipoprotein E; siali 25.6 26 0.00088 20.0 1.0 16 8-23 6-21 (26)
9 3lcm_A SMU.1420, putative oxid 24.9 47 0.0016 27.1 3.1 24 85-108 64-87 (196)
10 3hp4_A GDSL-esterase; psychrot 24.5 25 0.00085 27.5 1.2 46 94-161 66-111 (185)
11 2lul_A Tyrosine-protein kinase 24.4 83 0.0028 24.9 4.4 32 138-171 109-140 (164)
12 2yvc_D Neprilysin; protein-pep 21.5 24 0.00082 19.7 0.4 13 213-225 6-18 (26)
No 1
>1fll_X B-cell surface antigen CD40; TRAF3 with CD40 peptide, TNF signaling, apoptosis; 3.50A {Homo sapiens}
Probab=52.93 E-value=7.4 Score=22.01 Aligned_cols=11 Identities=27% Similarity=0.172 Sum_probs=9.3
Q ss_pred CCCcccccCCC
Q 023751 245 RQDCSHWCLPG 255 (278)
Q Consensus 245 ~~DC~HWCLPG 255 (278)
.+|-+|||+|-
T Consensus 6 vqeTl~~~qPV 16 (26)
T 1fll_X 6 VQETLHGSQPV 16 (26)
T ss_dssp CCCCCCCSSSC
T ss_pred hhHHhhcCccc
Confidence 47999999994
No 2
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=51.33 E-value=34 Score=27.26 Aligned_cols=52 Identities=17% Similarity=0.249 Sum_probs=35.1
Q ss_pred ccccEEEEeccccccccccCCcceeeecCCccCCCCCHHHHHHHHHHHHHHHHHhhCCCCCcEEEEEeecCCCc
Q 023751 93 KRADILVFNTGHWWVHGKTARGKNYFKEGDYLYPKFDAVEAYRRALKTWGKWIDDNIKPSKQLVFYRGYSSAHF 166 (278)
Q Consensus 93 ~~~DvlV~ntGhWw~~~~~~~~~~y~~~g~~v~~~~~~~~ay~~al~t~~~~i~~~~~~~~~~vffRt~sP~Hf 166 (278)
...|+|||+.|..=. + ...+.|+..|+.+++.+.+. ..++++++-+..|-..
T Consensus 73 ~~pd~Vvi~~G~ND~-------------~-------~~~~~~~~~l~~ii~~l~~~--~p~~~ii~~~~~P~~~ 124 (200)
T 4h08_A 73 TKFDVIHFNNGLHGF-------------D-------YTEEEYDKSFPKLIKIIRKY--APKAKLIWANTTPVRT 124 (200)
T ss_dssp SCCSEEEECCCSSCT-------------T-------SCHHHHHHHHHHHHHHHHHH--CTTCEEEEECCCCCEE
T ss_pred CCCCeEEEEeeeCCC-------------C-------CCHHHHHHHHHHHHHHHhhh--CCCccEEEeccCCCcc
Confidence 357999999885400 0 12457888888888877543 2356788888888543
No 3
>3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9
Probab=36.96 E-value=1.2e+02 Score=24.45 Aligned_cols=58 Identities=14% Similarity=0.041 Sum_probs=32.5
Q ss_pred HHHHHHHHHhcCCceEEeecccccccccC--CCCCCCCCCCCCCCCCCCCCCCcccccCCCchhHHHHHHHHHHhc
Q 023751 197 MKIVEEVIQEMRNPVILLNVTRLTNYRKD--GHPSIYGQNVTDGKKISRRRQDCSHWCLPGVPDAWNELIYATLVF 270 (278)
Q Consensus 197 ~~~v~~~~~~~~~~v~lLdit~ls~~R~D--gHps~y~~~~~~~~~~~~~~~DC~HWCLPGv~D~WNelL~~~L~~ 270 (278)
.+.++++.++. .+.++|+...+...+. +++.. ...|.+|----| =..|-+.|+..|..
T Consensus 163 ~~~i~~~a~~~--~v~~iD~~~~~~~~~~~~~~~~~-------------~~~DgvHpn~~G-~~~iA~~i~~~l~~ 222 (232)
T 3dc7_A 163 EAAIAQMTADY--GVPHLSLYRDAGMTFAIPAQAAI-------------YSVDTLHPNNAG-HRVIARKLQSFLDS 222 (232)
T ss_dssp HHHHHHHHHHH--TCCEEEHHHHSSCCTTSHHHHHH-------------HBSSSSSBCHHH-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHc--CCcEEecccccCCCccchhhhhh-------------ccCCCCCCCHHH-HHHHHHHHHHHHHH
Confidence 45566666554 4778999877554321 11111 136888843333 34566777776665
No 4
>3r6w_A FMN-dependent NADH-azoreductase 1; nitrofurazone, P. aeruginosa, nitroreductase, flavodoxin, oxidoreductase; HET: FMN NFZ; 2.08A {Pseudomonas aeruginosa} PDB: 3lt5_A* 2v9c_A* 3keg_A*
Probab=36.52 E-value=14 Score=30.64 Aligned_cols=22 Identities=18% Similarity=0.237 Sum_probs=17.7
Q ss_pred hhhhccccccEEEEeccccccc
Q 023751 87 KTANKWKRADILVFNTGHWWVH 108 (278)
Q Consensus 87 ~~~~~w~~~DvlV~ntGhWw~~ 108 (278)
+.......+|.|||.+=-||..
T Consensus 80 ~~~~~l~~AD~iV~~~P~y~~~ 101 (212)
T 3r6w_A 80 QLVGELFDSDLLVISTPMYNFS 101 (212)
T ss_dssp HHHHHHHHCSEEEEEEECBTTB
T ss_pred HHHHHHHhCCEEEEEcCccccc
Confidence 3345677899999999999874
No 5
>1yzf_A Lipase/acylhydrolase; structural GENO PSI, protein structure initiative, midwest center for struc genomics, MCSG; 1.90A {Enterococcus faecalis} SCOP: c.23.10.5
Probab=30.25 E-value=79 Score=24.29 Aligned_cols=123 Identities=15% Similarity=0.049 Sum_probs=62.6
Q ss_pred ccccEEEEeccccccccccCCcceeeecCCccCCCCCHHHHHHHHHHHHHHHHHhhCCCCCcEEEEEeecCCCccCCCCC
Q 023751 93 KRADILVFNTGHWWVHGKTARGKNYFKEGDYLYPKFDAVEAYRRALKTWGKWIDDNIKPSKQLVFYRGYSSAHFRGGDWD 172 (278)
Q Consensus 93 ~~~DvlV~ntGhWw~~~~~~~~~~y~~~g~~v~~~~~~~~ay~~al~t~~~~i~~~~~~~~~~vffRt~sP~Hf~~g~W~ 172 (278)
...|++|+..|.-= +.. +. .. ..+.|+..++.+++.+. ..+|++-+..|.... |
T Consensus 66 ~~pd~vvi~~G~ND----------~~~-~~----~~-~~~~~~~~l~~~i~~~~------~~~vi~~~~~p~~~~---~- 119 (195)
T 1yzf_A 66 EKPDEVVIFFGAND----------ASL-DR----NI-TVATFRENLETMIHEIG------SEKVILITPPYADSG---R- 119 (195)
T ss_dssp GCCSEEEEECCTTT----------TCT-TS----CC-CHHHHHHHHHHHHHHHC------GGGEEEECCCCCCTT---T-
T ss_pred cCCCEEEEEeeccc----------cCc-cC----CC-CHHHHHHHHHHHHHHhc------CCEEEEEcCCCCccc---c-
Confidence 36799999988521 110 10 11 24578888888877663 456787777765321 1
Q ss_pred CCCCCCCCCccCCCCCCCCCchHHHHHHHHHHHhcCCceEEeecccccccccCCCCCCCCCCCCCCCCCCCCCCCccccc
Q 023751 173 SGGSCNGETEPIFSGPFLDSYPLKMKIVEEVIQEMRNPVILLNVTRLTNYRKDGHPSIYGQNVTDGKKISRRRQDCSHWC 252 (278)
Q Consensus 173 ~gG~C~~~T~P~~~~~~~~~~~~~~~~v~~~~~~~~~~v~lLdit~ls~~R~DgHps~y~~~~~~~~~~~~~~~DC~HWC 252 (278)
|.. .........++.++++.++. .+.++|+.....-..+ .+. ....|.+|--
T Consensus 120 ----~~~--------~~~~~~~~~n~~~~~~a~~~--~~~~iD~~~~~~~~~~-~~~-------------~~~~Dg~Hp~ 171 (195)
T 1yzf_A 120 ----RPE--------RPQTRIKELVKVAQEVGAAH--NLPVIDLYKAMTVYPG-TDE-------------FLQADGLHFS 171 (195)
T ss_dssp ----CTT--------SCHHHHHHHHHHHHHHHHHT--TCCEECHHHHHHHSTT-GGG-------------GBCTTSSSBC
T ss_pred ----chh--------hhHHHHHHHHHHHHHHHHHh--CCeEEehHHHHhhcCC-ccc-------------cccCCCCCcC
Confidence 110 00000111223455555443 5889999876542211 010 1235777755
Q ss_pred CCCchhHHHHHHHHHHhc
Q 023751 253 LPGVPDAWNELIYATLVF 270 (278)
Q Consensus 253 LPGv~D~WNelL~~~L~~ 270 (278)
-.|- ..|-+.|+..|..
T Consensus 172 ~~G~-~~~a~~i~~~l~~ 188 (195)
T 1yzf_A 172 QVGY-ELLGALIVREIKG 188 (195)
T ss_dssp HHHH-HHHHHHHHHHHGG
T ss_pred HHHH-HHHHHHHHHHHHH
Confidence 4442 3455555665544
No 6
>3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str}
Probab=26.15 E-value=2.2e+02 Score=22.98 Aligned_cols=34 Identities=9% Similarity=0.080 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHHHHhhCCC---CCcEEEEEeecCC
Q 023751 131 VEAYRRALKTWGKWIDDNIKP---SKQLVFYRGYSSA 164 (278)
Q Consensus 131 ~~ay~~al~t~~~~i~~~~~~---~~~~vffRt~sP~ 164 (278)
.+.|+..|+.+++.+.+.... ..+.|++-+..|-
T Consensus 122 ~~~~~~~l~~li~~ir~~~~~~~~p~~~iil~~p~~~ 158 (232)
T 3dci_A 122 AEAAVSGMRRLAQIVETFIYKPREAVPKLLIVAPPPC 158 (232)
T ss_dssp HHHHHHHHHHHHHHHHHCCCSSTTCCCEEEEEECCCC
T ss_pred HHHHHHHHHHHHHHHHHhcccccCCCCeEEEEeCCCc
Confidence 457888888888887643210 3467777764443
No 7
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=25.63 E-value=12 Score=30.65 Aligned_cols=30 Identities=10% Similarity=0.013 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHHHhhCCCCCcEEEEEeecCCC
Q 023751 132 EAYRRALKTWGKWIDDNIKPSKQLVFYRGYSSAH 165 (278)
Q Consensus 132 ~ay~~al~t~~~~i~~~~~~~~~~vffRt~sP~H 165 (278)
+.+..-++++++.+.+ ..++|++-|..|..
T Consensus 101 ~~~~~~l~~ii~~~~~----~~~~iil~~~~P~~ 130 (209)
T 4hf7_A 101 DYTFGNIASMAELAKA----NKIKVILTSVLPAA 130 (209)
T ss_dssp HHHHHHHHHHHHHHHH----TTCEEEEECCCCCS
T ss_pred HHHHHHHHHhhHHHhc----cCceEEEEeeeccC
Confidence 4556667777665532 35689999988854
No 8
>1oeg_A Apolipoprotein E; sialic acid, heparin-binding, repeat, signal, disease mutation, polymorphism; NMR {Homo sapiens} SCOP: j.39.1.1
Probab=25.58 E-value=26 Score=20.00 Aligned_cols=16 Identities=13% Similarity=0.264 Sum_probs=12.6
Q ss_pred chhHHHHHHHhhccee
Q 023751 8 NRNQFESLLCLLREGL 23 (278)
Q Consensus 8 ~RNq~eSLlClL~~~~ 23 (278)
.|+||+.|+=-+..++
T Consensus 6 mr~Q~~~lveKvq~a~ 21 (26)
T 1oeg_A 6 MQRQWAGLVEKVQAAV 21 (26)
T ss_dssp TTTHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4899999998776554
No 9
>3lcm_A SMU.1420, putative oxidoreductase; NADPH:quinone oxidoreductase, MDAB; HET: FAD NAP; 1.80A {Streptococcus mutans} PDB: 4f8y_A*
Probab=24.92 E-value=47 Score=27.14 Aligned_cols=24 Identities=29% Similarity=0.530 Sum_probs=19.1
Q ss_pred cchhhhccccccEEEEeccccccc
Q 023751 85 IDKTANKWKRADILVFNTGHWWVH 108 (278)
Q Consensus 85 ld~~~~~w~~~DvlV~ntGhWw~~ 108 (278)
+++.......+|.|||.+=-||..
T Consensus 64 ~~~~~~~l~~AD~iV~~~P~y~~~ 87 (196)
T 3lcm_A 64 MEKYRDLVTWADHLIFIFPIWWSG 87 (196)
T ss_dssp GHHHHHHHHHCSEEEEEEECBTTB
T ss_pred HHHHHHHHHhCCEEEEECchhhcc
Confidence 444456778899999999999874
No 10
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=24.47 E-value=25 Score=27.45 Aligned_cols=46 Identities=13% Similarity=0.172 Sum_probs=28.9
Q ss_pred cccEEEEeccccccccccCCcceeeecCCccCCCCCHHHHHHHHHHHHHHHHHhhCCCCCcEEEEEee
Q 023751 94 RADILVFNTGHWWVHGKTARGKNYFKEGDYLYPKFDAVEAYRRALKTWGKWIDDNIKPSKQLVFYRGY 161 (278)
Q Consensus 94 ~~DvlV~ntGhWw~~~~~~~~~~y~~~g~~v~~~~~~~~ay~~al~t~~~~i~~~~~~~~~~vffRt~ 161 (278)
..|++|+..|.- +... + . ..+.|+..++.+++.+.+. ...|++-++
T Consensus 66 ~pd~vvi~~G~N----------D~~~-~------~-~~~~~~~~~~~~i~~~~~~----~~~vvl~~~ 111 (185)
T 3hp4_A 66 EPTHVLIELGAN----------DGLR-G------F-PVKKMQTNLTALVKKSQAA----NAMTALMEI 111 (185)
T ss_dssp CCSEEEEECCHH----------HHHT-T------C-CHHHHHHHHHHHHHHHHHT----TCEEEEECC
T ss_pred CCCEEEEEeecc----------cCCC-C------c-CHHHHHHHHHHHHHHHHHc----CCeEEEEeC
Confidence 679999998842 1110 1 1 2367888888888887643 345666554
No 11
>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens}
Probab=24.40 E-value=83 Score=24.91 Aligned_cols=32 Identities=19% Similarity=0.465 Sum_probs=18.7
Q ss_pred HHHHHHHHHhhCCCCCcEEEEEeecCCCccCCCC
Q 023751 138 LKTWGKWIDDNIKPSKQLVFYRGYSSAHFRGGDW 171 (278)
Q Consensus 138 l~t~~~~i~~~~~~~~~~vffRt~sP~Hf~~g~W 171 (278)
+..|++.|.+-+..+..+ ...+=|++|.+|.|
T Consensus 109 ~~~Wi~aL~~~i~~n~~~--~~~yHpg~~~~~~w 140 (164)
T 2lul_A 109 RDLWVKKLKEEIKNNNNI--MIKYHPKFWTDGSY 140 (164)
T ss_dssp HHHHHHHHHHHHTTCSCC--CSEECCSCCCTTCC
T ss_pred HHHHHHHHHHHHHHChhh--hhhcCCCcccCCeE
Confidence 334444444333333222 24689999999999
No 12
>2yvc_D Neprilysin; protein-peptide complex, cell adhesion; 3.20A {Mus musculus}
Probab=21.48 E-value=24 Score=19.65 Aligned_cols=13 Identities=8% Similarity=0.289 Sum_probs=10.4
Q ss_pred EeecccccccccC
Q 023751 213 LLNVTRLTNYRKD 225 (278)
Q Consensus 213 lLdit~ls~~R~D 225 (278)
-||||.++..||-
T Consensus 6 qmditdinapkpk 18 (26)
T 2yvc_D 6 QMDITDINAPKPK 18 (26)
T ss_pred ccccccccCCCcc
Confidence 4799999887774
Done!