Query 023751
Match_columns 278
No_of_seqs 134 out of 721
Neff 6.7
Searched_HMMs 13730
Date Mon Mar 25 12:10:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023751.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/023751hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2o14a2 c.23.10.8 (A:160-367) 67.4 16 0.0011 27.5 9.2 42 89-146 66-107 (208)
2 d3dc7a1 c.23.10.9 (A:18-224) U 63.5 13 0.00096 27.4 7.9 11 94-104 65-75 (207)
3 d1vjga_ c.23.10.6 (A:) Hypothe 32.5 3.4 0.00025 30.7 -0.7 40 94-146 72-111 (201)
4 d1k7ca_ c.23.10.4 (A:) Rhamnog 30.4 78 0.0056 23.2 7.5 79 132-233 108-201 (233)
5 d3bzwa1 c.23.10.9 (A:38-285) U 26.3 7.7 0.00056 28.7 0.4 14 93-106 69-82 (248)
6 d1jrla_ c.23.10.5 (A:) Thioest 23.3 9.2 0.00067 28.3 0.4 45 94-160 62-106 (179)
7 d1es9a_ c.23.10.3 (A:) Platele 21.1 7.7 0.00056 30.0 -0.6 29 133-163 108-136 (212)
8 d1fxwf_ c.23.10.3 (F:) Platele 20.5 8.1 0.00059 30.0 -0.6 30 133-164 108-137 (212)
9 d2hsja1 c.23.10.3 (A:1-211) Un 19.3 9.5 0.00069 29.3 -0.4 31 133-165 103-133 (211)
10 d1dxha2 c.78.1.1 (A:151-335) O 15.8 27 0.002 26.6 1.6 20 1-21 9-28 (185)
No 1
>d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]}
Probab=67.42 E-value=16 Score=27.51 Aligned_cols=42 Identities=7% Similarity=0.123 Sum_probs=25.0
Q ss_pred hhccccccEEEEeccccccccccCCcceeeecCCccCCCCCHHHHHHHHHHHHHHHHH
Q 023751 89 ANKWKRADILVFNTGHWWVHGKTARGKNYFKEGDYLYPKFDAVEAYRRALKTWGKWID 146 (278)
Q Consensus 89 ~~~w~~~DvlV~ntGhWw~~~~~~~~~~y~~~g~~v~~~~~~~~ay~~al~t~~~~i~ 146 (278)
....+..|++|+..|.= +....+ -...+.|+..|+.+++-+.
T Consensus 66 ~~~~~~~D~vvi~~G~N----------D~~~~~------~~~~~~~~~~l~~li~~~~ 107 (208)
T d2o14a2 66 LKYIKPGDYFMLQLGIN----------DTNPKH------KESEAEFKEVMRDMIRQVK 107 (208)
T ss_dssp HTTCCTTCEEEEECCTG----------GGCGGG------CCCHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCCEEEEEcCCC----------cccccc------cccHHHHHHHHHHHHHHHH
Confidence 34445579999987732 111001 1235678888888887764
No 2
>d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]}
Probab=63.54 E-value=13 Score=27.44 Aligned_cols=11 Identities=27% Similarity=0.341 Sum_probs=9.2
Q ss_pred cccEEEEeccc
Q 023751 94 RADILVFNTGH 104 (278)
Q Consensus 94 ~~DvlV~ntGh 104 (278)
..|+||+..|.
T Consensus 65 ~~d~Vii~~G~ 75 (207)
T d3dc7a1 65 DADFIAVFGGV 75 (207)
T ss_dssp TCSEEEEECCH
T ss_pred CCCEEEEccCc
Confidence 57999999874
No 3
>d1vjga_ c.23.10.6 (A:) Hypothetical protein alr1529 {Nostoc sp. pcc 7120 [TaxId: 103690]}
Probab=32.49 E-value=3.4 Score=30.73 Aligned_cols=40 Identities=10% Similarity=0.037 Sum_probs=22.5
Q ss_pred cccEEEEeccccccccccCCcceeeecCCccCCCCCHHHHHHHHHHHHHHHHH
Q 023751 94 RADILVFNTGHWWVHGKTARGKNYFKEGDYLYPKFDAVEAYRRALKTWGKWID 146 (278)
Q Consensus 94 ~~DvlV~ntGhWw~~~~~~~~~~y~~~g~~v~~~~~~~~ay~~al~t~~~~i~ 146 (278)
..|++|++.|.--.. ...+.. ....+.|+..|+..++.+.
T Consensus 72 ~~d~vii~~G~ND~~---------~~~~~~----~~~~~~~~~~l~~~i~~~~ 111 (201)
T d1vjga_ 72 YNSLVVFSFGLNDTT---------LENGKP----RVSIAETIKNTREILTQAK 111 (201)
T ss_dssp SEEEEEEECCHHHHC---------EETTEE----SSCHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcccc---------cccccc----CCCHHHHHHHHHHHHHHhh
Confidence 579999999864221 111111 1224567777777766554
No 4
>d1k7ca_ c.23.10.4 (A:) Rhamnogalacturonan acetylesterase {Fungus (Aspergillus aculeatus) [TaxId: 5053]}
Probab=30.43 E-value=78 Score=23.18 Aligned_cols=79 Identities=15% Similarity=0.117 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHHHhhCCCCCcEEEEEeecCCCccCCCCCCCCCCCCCCccCCCCCCCCCchHHHHHHHHHHHhcCCce
Q 023751 132 EAYRRALKTWGKWIDDNIKPSKQLVFYRGYSSAHFRGGDWDSGGSCNGETEPIFSGPFLDSYPLKMKIVEEVIQEMRNPV 211 (278)
Q Consensus 132 ~ay~~al~t~~~~i~~~~~~~~~~vffRt~sP~Hf~~g~W~~gG~C~~~T~P~~~~~~~~~~~~~~~~v~~~~~~~~~~v 211 (278)
..|+..|+.+.+.+.. ....+++-+..|.-.. .. +..........+.++++.++. .+
T Consensus 108 ~~~~~~l~~~i~~~~~----~~~~~i~~~~~~~~~~---------~~--------~~~~~~~~~~~~~~~~~a~~~--~v 164 (233)
T d1k7ca_ 108 LTFPAYLENAAKLFTA----KGAKVILSSQTPNNPW---------ET--------GTFVNSPTRFVEYAELAAEVA--GV 164 (233)
T ss_dssp EBHHHHHHHHHHHHHH----TTCEEEEECCCCCCTT---------TT--------SSCCCCCCHHHHHHHHHHHHH--TC
T ss_pred HHHHHHHHHHHHHHHh----cCCEEEEEecCccccc---------cc--------cchhhhHHHHHHHHHHHHHHc--CC
Confidence 4577778777766542 2345666554443210 00 111111112234555665544 57
Q ss_pred EEeecccccc--------------cccCC-CCCCCCC
Q 023751 212 ILLNVTRLTN--------------YRKDG-HPSIYGQ 233 (278)
Q Consensus 212 ~lLdit~ls~--------------~R~Dg-Hps~y~~ 233 (278)
.++|+..++. +.+|+ ||+..++
T Consensus 165 ~~iDl~~~~~~~~~~~~~~~~~~~~~~DgiHpn~~G~ 201 (233)
T d1k7ca_ 165 EYVDHWSYVDSIYETLGNATVNSYFPIDHTHTSPAGA 201 (233)
T ss_dssp EEECHHHHHHHHHHHHCHHHHHHTCSSSSSCCCHHHH
T ss_pred CeeeHHHHHHHHHHHcCchhhhhhcCCCCcCCCHHHH
Confidence 8899876552 55787 9886543
No 5
>d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=26.28 E-value=7.7 Score=28.66 Aligned_cols=14 Identities=14% Similarity=0.046 Sum_probs=10.1
Q ss_pred ccccEEEEeccccc
Q 023751 93 KRADILVFNTGHWW 106 (278)
Q Consensus 93 ~~~DvlV~ntGhWw 106 (278)
...|++|+..|...
T Consensus 69 ~~~d~vii~~g~Nd 82 (248)
T d3bzwa1 69 GEVDAILVFMGTND 82 (248)
T ss_dssp TTCCEEEEECCHHH
T ss_pred CCCCEEEEEecccc
Confidence 35788988888544
No 6
>d1jrla_ c.23.10.5 (A:) Thioesterase I, TAP {Escherichia coli [TaxId: 562]}
Probab=23.34 E-value=9.2 Score=28.28 Aligned_cols=45 Identities=7% Similarity=0.038 Sum_probs=25.6
Q ss_pred cccEEEEeccccccccccCCcceeeecCCccCCCCCHHHHHHHHHHHHHHHHHhhCCCCCcEEEEEe
Q 023751 94 RADILVFNTGHWWVHGKTARGKNYFKEGDYLYPKFDAVEAYRRALKTWGKWIDDNIKPSKQLVFYRG 160 (278)
Q Consensus 94 ~~DvlV~ntGhWw~~~~~~~~~~y~~~g~~v~~~~~~~~ay~~al~t~~~~i~~~~~~~~~~vffRt 160 (278)
..|+||+..|.- +.+. + ...+.+++.++.+++-+.+. ..+|++-+
T Consensus 62 ~pd~vii~~G~N----------D~~~-~-------~~~~~~~~~~~~~i~~~~~~----~~~vil~~ 106 (179)
T d1jrla_ 62 QPRWVLVELGGN----------DGLR-G-------FQPQQTEQTLRQILQDVKAA----NAEPLLMQ 106 (179)
T ss_dssp CCSEEEEECCTT----------TTTT-T-------CCHHHHHHHHHHHHHHHHHT----TCEEEEEC
T ss_pred CCcEEEEEEecc----------cccc-c-------cchhhhhhhHHHHHHHHHhc----cCcEEEEe
Confidence 469999998852 1111 1 12456777777777666432 34555543
No 7
>d1es9a_ c.23.10.3 (A:) Platelet-activating factor acetylhydrolase {Cow (Bos taurus), alpha1 [TaxId: 9913]}
Probab=21.08 E-value=7.7 Score=30.04 Aligned_cols=29 Identities=10% Similarity=0.132 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHHHhhCCCCCcEEEEEeecC
Q 023751 133 AYRRALKTWGKWIDDNIKPSKQLVFYRGYSS 163 (278)
Q Consensus 133 ay~~al~t~~~~i~~~~~~~~~~vffRt~sP 163 (278)
-+...++++++-|.... ..+.|++-+..|
T Consensus 108 ~~~~~~~~ii~~l~~~~--p~~~Ii~~~~~p 136 (212)
T d1es9a_ 108 QVTGGIKAIVQLVNERQ--PQARVVVLGLLP 136 (212)
T ss_dssp HHHHHHHHHHHHHHHHS--TTCEEEEECCCC
T ss_pred HHHHHHHHHHHHHHHhh--ccccccceeeee
Confidence 44556666666664332 346788877766
No 8
>d1fxwf_ c.23.10.3 (F:) Platelet-activating factor acetylhydrolase {Cow (Bos taurus), alpha2 [TaxId: 9913]}
Probab=20.47 E-value=8.1 Score=29.96 Aligned_cols=30 Identities=7% Similarity=0.085 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHHhhCCCCCcEEEEEeecCC
Q 023751 133 AYRRALKTWGKWIDDNIKPSKQLVFYRGYSSA 164 (278)
Q Consensus 133 ay~~al~t~~~~i~~~~~~~~~~vffRt~sP~ 164 (278)
.+...++.+++.|.+.. ..+.|++-++.|.
T Consensus 108 ~~~~~~~~~i~~i~~~~--p~~~Ii~~~~~P~ 137 (212)
T d1fxwf_ 108 EVAGGIEAIVQLINTRQ--PQAKIIVLGLLPR 137 (212)
T ss_dssp HHHHHHHHHHHHHHHHC--TTCEEEEECCCCC
T ss_pred HHHHHHHHHHHHHHHHh--ccccccceeeccc
Confidence 34455666666664432 3567888887773
No 9
>d2hsja1 c.23.10.3 (A:1-211) Uncharacterized protein SP1450 {Streptococcus pneumoniae [TaxId: 1313]}
Probab=19.32 E-value=9.5 Score=29.33 Aligned_cols=31 Identities=3% Similarity=-0.108 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHHhhCCCCCcEEEEEeecCCC
Q 023751 133 AYRRALKTWGKWIDDNIKPSKQLVFYRGYSSAH 165 (278)
Q Consensus 133 ay~~al~t~~~~i~~~~~~~~~~vffRt~sP~H 165 (278)
.+...++.+++-|.+.. ..+.|++-|+.|.-
T Consensus 103 ~~~~~~~~li~~i~~~~--p~~~i~v~~~~P~~ 133 (211)
T d2hsja1 103 EALNNLEAIIQSVARDY--PLTEIKLLSILPVN 133 (211)
T ss_dssp HHHHHHHHHHHHHHHHC--TTCEEEEECCCCCC
T ss_pred HHHHhhhhhhhhhcccc--ccceEEEeeecCCC
Confidence 45555666665554332 35678888887754
No 10
>d1dxha2 c.78.1.1 (A:151-335) Ornithine transcarbamoylase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=15.84 E-value=27 Score=26.60 Aligned_cols=20 Identities=35% Similarity=0.365 Sum_probs=16.7
Q ss_pred CeeeccCchhHHHHHHHhhcc
Q 023751 1 MLVGDSMNRNQFESLLCLLRE 21 (278)
Q Consensus 1 ~FVGDSl~RNq~eSLlClL~~ 21 (278)
+||||.-+ |-..||+-+++.
T Consensus 9 a~vGD~~n-nV~~Sli~~~~~ 28 (185)
T d1dxha2 9 AYLGDARN-NMGNSLLLIGAK 28 (185)
T ss_dssp EEESCCSS-HHHHHHHHHHHH
T ss_pred EEEcCCcc-hHHHHHHHHHHH
Confidence 48999756 799999998874
Done!