Query 023753
Match_columns 277
No_of_seqs 344 out of 1942
Neff 5.5
Searched_HMMs 29240
Date Mon Mar 25 12:12:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023753.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023753hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gco_A Protein STI-1; structur 99.7 3.7E-17 1.3E-21 130.0 14.5 95 180-276 20-114 (126)
2 3gyz_A Chaperone protein IPGC; 99.7 2.4E-16 8.1E-21 130.9 13.6 94 181-276 44-137 (151)
3 4ga2_A E3 SUMO-protein ligase 99.7 3.5E-16 1.2E-20 127.1 12.4 97 178-276 36-133 (150)
4 3sz7_A HSC70 cochaperone (SGT) 99.7 1.9E-15 6.4E-20 122.4 14.0 95 180-276 18-112 (164)
5 2vgx_A Chaperone SYCD; alterna 99.6 1.7E-15 6E-20 123.2 13.1 95 180-276 28-122 (148)
6 3upv_A Heat shock protein STI1 99.6 2.3E-15 7.7E-20 116.3 13.0 91 181-273 12-102 (126)
7 2xcb_A PCRH, regulatory protei 99.6 1.9E-15 6.3E-20 120.5 12.7 94 181-276 26-119 (142)
8 1hxi_A PEX5, peroxisome target 99.6 1.4E-15 4.7E-20 119.8 11.8 94 181-276 25-118 (121)
9 4gcn_A Protein STI-1; structur 99.6 3E-15 1E-19 118.5 12.3 95 179-275 14-115 (127)
10 3rkv_A Putative peptidylprolyl 99.6 6.8E-15 2.3E-19 118.9 11.2 95 180-276 18-130 (162)
11 4ga2_A E3 SUMO-protein ligase 99.6 7.1E-16 2.4E-20 125.3 5.2 94 181-276 5-98 (150)
12 3q49_B STIP1 homology and U bo 99.6 1.8E-14 6.2E-19 111.3 12.3 94 180-275 16-109 (137)
13 1elw_A TPR1-domain of HOP; HOP 99.6 5.5E-14 1.9E-18 103.9 14.1 95 180-276 11-105 (118)
14 2lni_A Stress-induced-phosphop 99.6 5.5E-14 1.9E-18 106.6 14.5 94 181-276 24-117 (133)
15 3k9i_A BH0479 protein; putativ 99.6 3E-15 1E-19 115.5 7.2 89 186-276 3-94 (117)
16 3vtx_A MAMA; tetratricopeptide 99.6 2.6E-14 8.8E-19 116.4 12.5 96 179-276 79-174 (184)
17 2hr2_A Hypothetical protein; a 99.6 9.4E-15 3.2E-19 124.6 10.2 94 181-276 19-135 (159)
18 3urz_A Uncharacterized protein 99.6 1.9E-14 6.5E-19 122.1 12.1 94 181-276 12-121 (208)
19 2kck_A TPR repeat; tetratricop 99.6 5.2E-14 1.8E-18 103.3 12.6 96 179-276 12-110 (112)
20 2vyi_A SGTA protein; chaperone 99.6 1.3E-13 4.4E-18 103.3 14.7 95 180-276 19-113 (131)
21 2dba_A Smooth muscle cell asso 99.5 9.2E-14 3.1E-18 107.5 13.0 94 181-276 36-132 (148)
22 2pl2_A Hypothetical conserved 99.5 4.5E-14 1.5E-18 120.5 12.4 96 179-276 11-117 (217)
23 2xev_A YBGF; tetratricopeptide 99.5 1.4E-13 4.9E-18 105.2 13.8 94 181-276 10-109 (129)
24 1a17_A Serine/threonine protei 99.5 1.9E-13 6.4E-18 107.7 14.5 94 181-276 21-114 (166)
25 1zu2_A Mitochondrial import re 99.5 2.3E-14 7.9E-19 122.1 9.4 89 186-276 15-124 (158)
26 4gyw_A UDP-N-acetylglucosamine 99.5 6.9E-14 2.4E-18 142.8 14.6 96 179-276 15-110 (723)
27 1na0_A Designed protein CTPR3; 99.5 3.7E-13 1.3E-17 100.0 14.7 95 180-276 16-110 (125)
28 3urz_A Uncharacterized protein 99.5 1.4E-13 4.7E-18 116.7 12.5 97 179-276 60-190 (208)
29 4gyw_A UDP-N-acetylglucosamine 99.5 1.5E-13 5.1E-18 140.3 14.7 97 178-276 48-144 (723)
30 2fbn_A 70 kDa peptidylprolyl i 99.5 3.4E-13 1.2E-17 112.3 13.8 94 181-276 46-155 (198)
31 2pl2_A Hypothetical conserved 99.5 1.9E-13 6.5E-18 116.6 12.4 87 187-276 98-184 (217)
32 1elr_A TPR2A-domain of HOP; HO 99.5 3.6E-13 1.2E-17 101.2 12.3 94 180-275 11-111 (131)
33 3vtx_A MAMA; tetratricopeptide 99.5 5.5E-13 1.9E-17 108.4 14.3 94 180-275 12-105 (184)
34 2e2e_A Formate-dependent nitri 99.5 3.7E-13 1.3E-17 109.3 13.1 98 178-276 49-148 (177)
35 2kat_A Uncharacterized protein 99.5 1.7E-13 5.7E-18 104.6 10.2 84 190-275 2-85 (115)
36 1p5q_A FKBP52, FK506-binding p 99.5 3.6E-13 1.2E-17 123.4 14.1 95 180-276 154-263 (336)
37 4i17_A Hypothetical protein; T 99.5 5.2E-13 1.8E-17 112.5 13.9 94 181-276 15-109 (228)
38 2h6f_A Protein farnesyltransfe 99.5 2.7E-13 9.1E-18 128.1 13.1 97 178-276 102-199 (382)
39 2h6f_A Protein farnesyltransfe 99.5 2.3E-13 8E-18 128.5 10.8 95 180-276 138-233 (382)
40 1xnf_A Lipoprotein NLPI; TPR, 99.5 1.3E-12 4.3E-17 110.8 14.3 96 179-276 49-144 (275)
41 3gyz_A Chaperone protein IPGC; 99.5 3E-14 1E-18 118.1 4.0 85 191-277 20-104 (151)
42 1hh8_A P67PHOX, NCF-2, neutrop 99.4 1E-12 3.5E-17 108.7 13.2 96 179-276 43-154 (213)
43 4i17_A Hypothetical protein; T 99.4 6.5E-13 2.2E-17 111.8 12.0 95 179-275 48-149 (228)
44 2c2l_A CHIP, carboxy terminus 99.4 4.2E-13 1.4E-17 119.7 11.2 95 180-276 11-105 (281)
45 2fo7_A Synthetic consensus TPR 99.4 2.5E-12 8.7E-17 95.9 13.3 94 181-276 43-136 (136)
46 1kt0_A FKBP51, 51 kDa FK506-bi 99.4 9.8E-13 3.3E-17 125.7 13.0 94 181-276 276-384 (457)
47 2fo7_A Synthetic consensus TPR 99.4 4.7E-12 1.6E-16 94.4 13.5 95 180-276 8-102 (136)
48 3uq3_A Heat shock protein STI1 99.4 2.5E-12 8.6E-17 107.4 13.3 94 178-273 144-237 (258)
49 3as5_A MAMA; tetratricopeptide 99.4 3.2E-12 1.1E-16 100.9 12.9 95 180-276 83-177 (186)
50 2vgx_A Chaperone SYCD; alterna 99.4 2.9E-13 9.9E-18 110.0 6.9 84 192-277 6-89 (148)
51 3as5_A MAMA; tetratricopeptide 99.4 6.7E-12 2.3E-16 99.1 14.6 96 179-276 48-143 (186)
52 1ihg_A Cyclophilin 40; ppiase 99.4 1.7E-12 5.9E-17 121.5 11.3 94 181-276 231-340 (370)
53 1wao_1 Serine/threonine protei 99.4 3E-12 1E-16 123.5 12.9 92 183-276 16-107 (477)
54 4eqf_A PEX5-related protein; a 99.4 3.2E-12 1.1E-16 114.2 11.8 95 179-275 219-313 (365)
55 2q7f_A YRRB protein; TPR, prot 99.4 6.2E-12 2.1E-16 104.6 12.8 96 179-276 131-226 (243)
56 2e2e_A Formate-dependent nitri 99.4 2.1E-12 7.2E-17 104.8 9.5 90 185-276 22-114 (177)
57 2q7f_A YRRB protein; TPR, prot 99.4 1.6E-11 5.5E-16 102.1 14.7 95 180-276 64-158 (243)
58 4gco_A Protein STI-1; structur 99.4 1.9E-12 6.4E-17 102.6 8.6 77 198-276 4-80 (126)
59 3mkr_A Coatomer subunit epsilo 99.4 6.2E-12 2.1E-16 113.0 13.0 93 182-276 175-268 (291)
60 2if4_A ATFKBP42; FKBP-like, al 99.3 1.5E-12 5.1E-17 119.6 8.8 94 181-276 187-297 (338)
61 4eqf_A PEX5-related protein; a 99.3 5.1E-12 1.7E-16 112.8 12.0 94 180-275 72-165 (365)
62 1fch_A Peroxisomal targeting s 99.3 8.2E-12 2.8E-16 110.5 13.1 96 179-276 223-318 (368)
63 2xcb_A PCRH, regulatory protei 99.3 1.4E-12 4.9E-17 103.6 7.4 82 194-277 5-86 (142)
64 2vsy_A XCC0866; transferase, g 99.3 8.5E-12 2.9E-16 120.4 13.6 95 180-276 30-124 (568)
65 4abn_A Tetratricopeptide repea 99.3 4.1E-12 1.4E-16 121.6 10.9 96 179-276 176-291 (474)
66 1fch_A Peroxisomal targeting s 99.3 1.9E-11 6.6E-16 108.1 14.3 96 179-276 70-165 (368)
67 1hh8_A P67PHOX, NCF-2, neutrop 99.3 1.3E-11 4.5E-16 102.0 12.4 91 181-276 14-104 (213)
68 3uq3_A Heat shock protein STI1 99.3 1.4E-11 4.7E-16 102.9 12.5 96 179-276 85-206 (258)
69 1w3b_A UDP-N-acetylglucosamine 99.3 2.4E-11 8.3E-16 109.6 14.5 94 181-276 211-304 (388)
70 3u4t_A TPR repeat-containing p 99.3 9.5E-12 3.2E-16 105.8 11.1 97 178-276 79-175 (272)
71 3qou_A Protein YBBN; thioredox 99.3 1.5E-11 5.2E-16 109.6 12.5 94 181-276 125-252 (287)
72 4abn_A Tetratricopeptide repea 99.3 8.2E-12 2.8E-16 119.5 11.4 95 179-276 108-212 (474)
73 3ieg_A DNAJ homolog subfamily 99.3 2.8E-11 9.4E-16 105.3 13.6 93 180-274 10-102 (359)
74 3cv0_A Peroxisome targeting si 99.3 3.3E-11 1.1E-15 104.0 13.9 95 179-275 178-272 (327)
75 2vq2_A PILW, putative fimbrial 99.3 3.3E-11 1.1E-15 98.4 13.1 87 186-274 55-144 (225)
76 3ma5_A Tetratricopeptide repea 99.3 8.9E-12 3E-16 94.3 8.9 72 202-275 2-73 (100)
77 2ho1_A Type 4 fimbrial biogene 99.3 3.1E-11 1.1E-15 101.7 12.9 95 180-276 78-174 (252)
78 2vq2_A PILW, putative fimbrial 99.3 3.9E-11 1.3E-15 98.0 13.1 90 180-271 15-105 (225)
79 3ieg_A DNAJ homolog subfamily 99.3 4.2E-11 1.4E-15 104.2 14.0 95 180-276 241-339 (359)
80 2ho1_A Type 4 fimbrial biogene 99.3 5.2E-11 1.8E-15 100.3 14.1 96 179-276 147-242 (252)
81 1w3b_A UDP-N-acetylglucosamine 99.3 2.6E-11 9E-16 109.4 13.0 95 180-276 244-338 (388)
82 1xnf_A Lipoprotein NLPI; TPR, 99.3 5.3E-11 1.8E-15 100.7 14.0 94 178-274 82-175 (275)
83 3cv0_A Peroxisome targeting si 99.3 6.5E-11 2.2E-15 102.2 14.7 95 180-276 28-122 (327)
84 2l6j_A TPR repeat-containing p 99.3 1.3E-12 4.6E-17 96.9 3.5 88 180-269 11-104 (111)
85 2vsy_A XCC0866; transferase, g 99.3 4.7E-11 1.6E-15 115.2 14.8 97 178-276 62-161 (568)
86 2y4t_A DNAJ homolog subfamily 99.3 4.4E-11 1.5E-15 109.0 13.6 95 180-276 33-127 (450)
87 3u4t_A TPR repeat-containing p 99.3 2E-11 6.9E-16 103.7 10.5 93 181-276 11-107 (272)
88 3hym_B Cell division cycle pro 99.3 4.1E-11 1.4E-15 103.5 12.4 94 181-276 64-158 (330)
89 3hym_B Cell division cycle pro 99.3 4.9E-11 1.7E-15 103.1 12.8 93 181-275 167-268 (330)
90 2kc7_A BFR218_protein; tetratr 99.3 8.3E-12 2.8E-16 92.2 6.6 86 181-276 8-94 (99)
91 2pzi_A Probable serine/threoni 99.2 9.8E-12 3.3E-16 124.6 8.9 93 181-276 441-533 (681)
92 1a17_A Serine/threonine protei 99.2 9.5E-11 3.2E-15 92.1 12.5 92 179-272 53-146 (166)
93 3qky_A Outer membrane assembly 99.2 4.9E-11 1.7E-15 102.8 11.6 93 181-275 60-180 (261)
94 2gw1_A Mitochondrial precursor 99.2 1.3E-10 4.3E-15 107.0 14.0 93 181-276 14-106 (514)
95 3qky_A Outer membrane assembly 99.2 8.4E-11 2.9E-15 101.3 11.9 95 181-276 23-130 (261)
96 1na3_A Designed protein CTPR2; 99.2 1.7E-10 5.9E-15 82.6 11.6 74 180-254 16-89 (91)
97 3fp2_A TPR repeat-containing p 99.2 7.2E-11 2.5E-15 109.8 12.0 94 180-276 32-125 (537)
98 2y4t_A DNAJ homolog subfamily 99.2 1.1E-10 3.8E-15 106.3 13.0 95 180-276 264-362 (450)
99 2pzi_A Probable serine/threoni 99.2 7.4E-11 2.5E-15 118.2 12.8 92 184-277 402-501 (681)
100 2r5s_A Uncharacterized protein 99.2 3.8E-11 1.3E-15 98.4 8.7 90 184-275 17-140 (176)
101 4gcn_A Protein STI-1; structur 99.2 2.3E-11 7.9E-16 96.0 7.1 70 205-276 6-75 (127)
102 3fp2_A TPR repeat-containing p 99.2 1.9E-10 6.5E-15 106.9 13.4 94 181-276 284-377 (537)
103 2ond_A Cleavage stimulation fa 99.2 1E-10 3.6E-15 104.2 11.1 85 190-276 81-167 (308)
104 3mkr_A Coatomer subunit epsilo 99.2 2.6E-10 8.8E-15 102.4 13.5 96 179-276 136-233 (291)
105 1p5q_A FKBP52, FK506-binding p 99.2 1.8E-10 6E-15 105.5 12.5 91 180-272 203-294 (336)
106 2xpi_A Anaphase-promoting comp 99.2 2.7E-10 9.2E-15 107.8 14.0 96 179-276 481-583 (597)
107 1na3_A Designed protein CTPR2; 99.2 1.8E-10 6.2E-15 82.5 9.8 70 205-276 7-76 (91)
108 2yhc_A BAMD, UPF0169 lipoprote 99.2 1.5E-10 5.1E-15 98.7 10.8 95 181-276 12-129 (225)
109 1qqe_A Vesicular transport pro 99.2 6.6E-11 2.3E-15 105.1 8.7 96 179-276 123-232 (292)
110 1qqe_A Vesicular transport pro 99.2 1.1E-10 3.8E-15 103.7 10.2 95 180-276 84-191 (292)
111 2l6j_A TPR repeat-containing p 99.2 1.7E-10 5.9E-15 85.3 9.5 69 206-276 3-71 (111)
112 3upv_A Heat shock protein STI1 99.1 2.1E-10 7.3E-15 88.1 9.8 71 204-276 1-71 (126)
113 2ond_A Cleavage stimulation fa 99.1 2.1E-10 7E-15 102.3 10.6 98 178-276 104-202 (308)
114 2yhc_A BAMD, UPF0169 lipoprote 99.1 2.4E-10 8E-15 97.4 10.3 96 180-276 48-180 (225)
115 2kck_A TPR repeat; tetratricop 99.1 1.6E-10 5.5E-15 84.4 8.1 72 202-275 1-72 (112)
116 2if4_A ATFKBP42; FKBP-like, al 99.1 6.4E-11 2.2E-15 108.7 6.9 95 181-276 238-332 (338)
117 3q49_B STIP1 homology and U bo 99.1 6E-10 2E-14 85.7 11.3 74 201-276 3-76 (137)
118 2xpi_A Anaphase-promoting comp 99.1 6.7E-10 2.3E-14 105.1 13.7 94 181-276 381-474 (597)
119 3edt_B KLC 2, kinesin light ch 99.1 1.7E-10 5.9E-15 96.9 8.2 94 178-273 90-199 (283)
120 2gw1_A Mitochondrial precursor 99.1 2.5E-10 8.7E-15 104.9 10.0 97 178-276 377-482 (514)
121 4g1t_A Interferon-induced prot 99.1 9.7E-10 3.3E-14 101.2 13.7 97 179-276 57-171 (472)
122 3sz7_A HSC70 cochaperone (SGT) 99.1 4.8E-10 1.7E-14 90.3 9.9 72 203-276 7-78 (164)
123 2r5s_A Uncharacterized protein 99.1 4.5E-10 1.5E-14 91.9 9.8 83 188-272 89-173 (176)
124 3nf1_A KLC 1, kinesin light ch 99.1 3.2E-10 1.1E-14 97.1 9.1 96 179-276 159-311 (311)
125 3bee_A Putative YFRE protein; 99.1 8.8E-10 3E-14 84.7 10.3 72 203-276 2-76 (93)
126 1wao_1 Serine/threonine protei 99.1 1E-10 3.5E-15 112.8 5.7 96 179-276 46-154 (477)
127 3edt_B KLC 2, kinesin light ch 99.1 4.1E-10 1.4E-14 94.6 8.6 92 179-272 49-156 (283)
128 2vyi_A SGTA protein; chaperone 99.0 1.5E-09 5.2E-14 80.9 10.4 79 179-259 52-130 (131)
129 2fbn_A 70 kDa peptidylprolyl i 99.0 9.6E-10 3.3E-14 91.2 9.8 91 179-271 94-185 (198)
130 2lni_A Stress-induced-phosphop 99.0 1.8E-09 6.1E-14 81.4 10.0 78 179-258 56-133 (133)
131 3qou_A Protein YBBN; thioredox 99.0 1.6E-09 5.4E-14 96.5 10.6 85 186-272 198-284 (287)
132 3ro3_A PINS homolog, G-protein 99.0 1.3E-09 4.5E-14 83.5 8.6 93 179-273 15-119 (164)
133 4g1t_A Interferon-induced prot 99.0 1.4E-09 4.9E-14 100.0 10.1 94 181-275 255-366 (472)
134 2qfc_A PLCR protein; TPR, HTH, 99.0 6E-09 2.1E-13 91.9 13.7 92 181-274 123-227 (293)
135 1hxi_A PEX5, peroxisome target 99.0 2.9E-09 9.8E-14 83.4 10.3 66 209-276 19-84 (121)
136 2kc7_A BFR218_protein; tetratr 99.0 3.3E-09 1.1E-13 78.0 9.9 64 211-276 4-68 (99)
137 3ro3_A PINS homolog, G-protein 99.0 2.4E-09 8.2E-14 82.0 9.3 95 179-275 55-161 (164)
138 3k9i_A BH0479 protein; putativ 99.0 2.2E-09 7.7E-14 82.2 9.2 75 179-254 33-107 (117)
139 2ifu_A Gamma-SNAP; membrane fu 99.0 1.6E-09 5.4E-14 96.9 9.2 93 180-276 123-227 (307)
140 3ro2_A PINS homolog, G-protein 99.0 2.6E-09 8.8E-14 91.2 9.9 92 181-274 13-114 (338)
141 4a1s_A PINS, partner of inscut 98.9 4E-09 1.4E-13 95.0 11.0 91 181-273 56-156 (411)
142 3nf1_A KLC 1, kinesin light ch 98.9 1.4E-09 4.8E-14 93.1 7.5 95 178-274 116-226 (311)
143 1na0_A Designed protein CTPR3; 98.9 1.2E-08 4E-13 75.3 11.6 75 179-254 49-123 (125)
144 2ifu_A Gamma-SNAP; membrane fu 98.9 1.4E-09 4.7E-14 97.3 7.6 92 181-275 84-187 (307)
145 3u3w_A Transcriptional activat 98.9 1.9E-09 6.4E-14 95.2 8.3 94 178-273 160-267 (293)
146 3gw4_A Uncharacterized protein 98.9 3.1E-09 1E-13 86.3 8.9 91 180-272 33-136 (203)
147 1pc2_A Mitochondria fission pr 98.9 4.3E-09 1.5E-13 89.1 9.9 87 188-276 13-104 (152)
148 3sf4_A G-protein-signaling mod 98.9 3.9E-09 1.3E-13 93.8 9.9 93 180-274 16-118 (406)
149 1kt0_A FKBP51, 51 kDa FK506-bi 98.9 3.5E-09 1.2E-13 101.1 10.0 83 181-265 325-407 (457)
150 2qfc_A PLCR protein; TPR, HTH, 98.9 7.2E-09 2.5E-13 91.4 11.3 93 179-273 161-267 (293)
151 3ulq_A Response regulator aspa 98.9 4.8E-09 1.6E-13 95.2 10.1 93 179-273 190-294 (383)
152 1elw_A TPR1-domain of HOP; HOP 98.9 1.2E-08 4.1E-13 74.7 10.2 69 206-276 3-71 (118)
153 1ouv_A Conserved hypothetical 98.9 2.3E-08 7.8E-13 86.1 13.4 87 181-272 14-107 (273)
154 3u3w_A Transcriptional activat 98.9 2.2E-09 7.5E-14 94.7 7.1 92 181-274 123-227 (293)
155 3rjv_A Putative SEL1 repeat pr 98.9 8E-09 2.7E-13 87.8 10.3 87 186-274 102-199 (212)
156 3dra_A Protein farnesyltransfe 98.9 1.6E-08 5.3E-13 93.5 12.9 97 178-276 38-143 (306)
157 2dba_A Smooth muscle cell asso 98.9 9.7E-09 3.3E-13 78.9 9.7 74 201-276 22-98 (148)
158 3rkv_A Putative peptidylprolyl 98.9 3.8E-09 1.3E-13 84.9 7.5 73 181-254 71-144 (162)
159 1ihg_A Cyclophilin 40; ppiase 98.9 9.6E-09 3.3E-13 96.0 10.8 81 183-265 283-363 (370)
160 2ooe_A Cleavage stimulation fa 98.9 1.3E-08 4.3E-13 97.2 11.5 89 186-276 292-389 (530)
161 1ouv_A Conserved hypothetical 98.9 3.9E-08 1.3E-12 84.6 13.5 83 186-273 55-144 (273)
162 1dce_A Protein (RAB geranylger 98.8 2E-08 6.9E-13 99.5 13.1 87 188-276 44-142 (567)
163 3q15_A PSP28, response regulat 98.8 9.1E-09 3.1E-13 93.6 9.7 96 178-275 187-293 (378)
164 1elr_A TPR2A-domain of HOP; HO 98.8 7.4E-09 2.5E-13 77.3 7.5 70 205-276 2-71 (131)
165 2ooe_A Cleavage stimulation fa 98.8 1.5E-08 5.2E-13 96.6 11.2 97 178-275 326-423 (530)
166 3ulq_A Response regulator aspa 98.8 3.4E-09 1.2E-13 96.2 6.3 92 181-274 111-215 (383)
167 3u64_A Protein TP_0956; tetrat 98.8 1.1E-08 3.7E-13 95.2 9.5 88 187-275 177-272 (301)
168 3ro2_A PINS homolog, G-protein 98.8 8.6E-09 3E-13 87.9 8.2 95 179-275 229-335 (338)
169 3sf4_A G-protein-signaling mod 98.8 1.4E-08 4.9E-13 90.1 9.7 94 178-273 232-337 (406)
170 1dce_A Protein (RAB geranylger 98.8 1.8E-08 6.1E-13 99.9 11.2 86 189-276 89-177 (567)
171 1zu2_A Mitochondrial import re 98.8 7E-09 2.4E-13 88.1 7.0 60 189-249 62-132 (158)
172 3q7a_A Farnesyltransferase alp 98.8 3.6E-08 1.2E-12 93.2 12.4 97 178-276 59-158 (349)
173 2c2l_A CHIP, carboxy terminus 98.8 2.2E-08 7.5E-13 89.0 10.3 71 204-276 1-71 (281)
174 3gw4_A Uncharacterized protein 98.8 1.7E-08 5.8E-13 81.8 8.5 93 179-273 72-177 (203)
175 3ma5_A Tetratricopeptide repea 98.8 3.5E-08 1.2E-12 74.3 9.5 75 179-254 13-89 (100)
176 3ly7_A Transcriptional activat 98.8 4.1E-08 1.4E-12 93.7 12.3 102 173-276 195-343 (372)
177 4a1s_A PINS, partner of inscut 98.8 6.6E-09 2.3E-13 93.6 6.4 94 179-274 229-334 (411)
178 1klx_A Cysteine rich protein B 98.8 9.4E-08 3.2E-12 76.7 12.4 90 179-273 31-127 (138)
179 2xev_A YBGF; tetratricopeptide 98.8 9.6E-08 3.3E-12 72.4 11.5 75 179-254 45-122 (129)
180 2hr2_A Hypothetical protein; a 98.7 3.7E-08 1.3E-12 83.7 9.2 68 207-276 11-97 (159)
181 3rjv_A Putative SEL1 repeat pr 98.7 2.6E-08 8.7E-13 84.7 8.2 88 181-274 26-120 (212)
182 3dra_A Protein farnesyltransfe 98.7 9.6E-08 3.3E-12 88.2 12.6 88 187-276 124-219 (306)
183 3dss_A Geranylgeranyl transfer 98.7 1.2E-07 4.1E-12 88.9 13.0 97 178-276 112-226 (331)
184 2kat_A Uncharacterized protein 98.7 6.7E-08 2.3E-12 73.1 9.2 74 179-253 25-100 (115)
185 3n71_A Histone lysine methyltr 98.7 3.6E-08 1.2E-12 96.6 9.4 88 183-272 319-422 (490)
186 3qww_A SET and MYND domain-con 98.7 2.9E-08 9.7E-13 95.9 8.6 85 186-272 311-411 (433)
187 4f3v_A ESX-1 secretion system 98.7 3.2E-08 1.1E-12 91.1 7.3 67 207-275 171-240 (282)
188 3q15_A PSP28, response regulat 98.6 5E-08 1.7E-12 88.7 7.9 91 181-273 109-212 (378)
189 1hz4_A MALT regulatory protein 98.6 2.4E-07 8.4E-12 83.0 11.1 94 179-274 99-205 (373)
190 3dss_A Geranylgeranyl transfer 98.6 5E-07 1.7E-11 84.6 13.2 86 189-276 90-178 (331)
191 1hz4_A MALT regulatory protein 98.6 1.1E-07 3.8E-12 85.3 8.4 93 181-275 61-167 (373)
192 3qwp_A SET and MYND domain-con 98.6 1E-07 3.5E-12 91.5 8.4 86 185-272 299-400 (429)
193 2v5f_A Prolyl 4-hydroxylase su 98.5 5.8E-07 2E-11 68.9 10.2 71 179-250 11-88 (104)
194 3q7a_A Farnesyltransferase alp 98.5 3E-07 1E-11 86.9 9.8 98 177-276 91-200 (349)
195 2xm6_A Protein corresponding t 98.5 8.3E-07 2.9E-11 83.7 12.3 82 188-274 346-434 (490)
196 2v5f_A Prolyl 4-hydroxylase su 98.5 8.7E-07 3E-11 67.9 10.1 61 214-276 12-79 (104)
197 3e4b_A ALGK; tetratricopeptide 98.5 5.4E-07 1.8E-11 85.5 10.2 92 178-273 181-281 (452)
198 3bee_A Putative YFRE protein; 98.4 9.9E-07 3.4E-11 67.5 8.9 54 189-243 25-78 (93)
199 3e4b_A ALGK; tetratricopeptide 98.3 1.4E-06 4.9E-11 82.6 9.7 80 186-272 264-351 (452)
200 1nzn_A CGI-135 protein, fissio 98.3 2.1E-06 7.3E-11 70.5 9.0 88 187-276 15-107 (126)
201 1klx_A Cysteine rich protein B 98.3 2.9E-06 9.9E-11 67.9 9.1 79 187-272 9-90 (138)
202 2xm6_A Protein corresponding t 98.3 6.9E-06 2.4E-10 77.4 12.8 81 186-272 236-325 (490)
203 3n71_A Histone lysine methyltr 98.2 1.9E-06 6.6E-11 84.3 8.0 91 180-272 358-464 (490)
204 1pc2_A Mitochondria fission pr 98.1 8.6E-06 2.9E-10 68.8 7.9 72 179-251 38-114 (152)
205 4b4t_Q 26S proteasome regulato 97.9 1.6E-05 5.4E-10 72.1 7.5 88 185-274 107-206 (434)
206 3mv2_B Coatomer subunit epsilo 97.9 2.6E-05 9E-10 72.5 9.1 83 187-276 192-286 (310)
207 3mv2_B Coatomer subunit epsilo 97.9 4.1E-05 1.4E-09 71.3 9.5 97 177-275 104-210 (310)
208 3u64_A Protein TP_0956; tetrat 97.9 1.9E-05 6.6E-10 73.4 6.8 88 175-269 201-295 (301)
209 4e6h_A MRNA 3'-END-processing 97.8 7.9E-05 2.7E-09 75.7 11.0 81 190-272 326-407 (679)
210 1xi4_A Clathrin heavy chain; a 97.8 8.7E-05 3E-09 81.3 10.8 82 182-275 1085-1166(1630)
211 4b4t_Q 26S proteasome regulato 97.8 6.2E-05 2.1E-09 68.2 8.0 94 177-272 139-245 (434)
212 1y8m_A FIS1; mitochondria, unk 97.7 0.00048 1.6E-08 57.7 11.4 71 204-276 36-110 (144)
213 4e6h_A MRNA 3'-END-processing 97.6 0.00021 7.2E-09 72.6 10.8 88 187-276 484-574 (679)
214 4h7y_A Dual specificity protei 97.6 0.00029 9.8E-09 59.9 9.7 96 178-276 18-127 (161)
215 4f3v_A ESX-1 secretion system 97.6 0.00018 6.1E-09 66.0 9.1 72 176-249 174-248 (282)
216 3o48_A Mitochondria fission 1 97.6 0.00025 8.5E-09 58.8 8.1 83 191-276 25-111 (134)
217 1xi4_A Clathrin heavy chain; a 97.4 0.00063 2.1E-08 74.7 11.3 85 178-269 1110-1221(1630)
218 3ly7_A Transcriptional activat 97.4 0.00048 1.7E-08 65.7 8.7 60 183-244 287-346 (372)
219 3qww_A SET and MYND domain-con 97.3 0.00052 1.8E-08 66.0 8.8 67 179-246 346-425 (433)
220 3ffl_A Anaphase-promoting comp 97.3 0.0011 3.9E-08 56.7 9.3 86 181-268 28-147 (167)
221 3qwp_A SET and MYND domain-con 97.2 0.00042 1.4E-08 66.3 6.5 65 181-246 337-414 (429)
222 1nzn_A CGI-135 protein, fissio 97.0 0.0017 5.9E-08 53.0 7.4 63 188-251 53-117 (126)
223 2uy1_A Cleavage stimulation fa 96.9 0.0041 1.4E-07 60.1 10.2 89 179-269 292-380 (493)
224 2uy1_A Cleavage stimulation fa 96.9 0.0061 2.1E-07 58.9 11.1 59 190-250 196-254 (493)
225 1b89_A Protein (clathrin heavy 96.8 0.0057 1.9E-07 59.6 10.1 79 186-275 161-239 (449)
226 3o48_A Mitochondria fission 1 96.7 0.005 1.7E-07 50.9 7.5 64 187-251 57-121 (134)
227 1y8m_A FIS1; mitochondria, unk 96.6 0.0073 2.5E-07 50.5 8.5 64 187-251 56-120 (144)
228 1zbp_A Hypothetical protein VP 96.6 0.024 8E-07 52.0 12.4 90 184-275 8-132 (273)
229 1b89_A Protein (clathrin heavy 96.5 0.0015 5.3E-08 63.6 3.7 72 182-268 131-202 (449)
230 2ff4_A Probable regulatory pro 96.1 0.036 1.2E-06 52.0 10.9 84 186-271 128-233 (388)
231 4gns_B Protein CSD3, chitin bi 95.9 0.022 7.6E-07 58.7 9.1 58 209-268 339-396 (754)
232 1ya0_A SMG-7 transcript varian 95.8 0.027 9.3E-07 55.3 9.1 76 178-254 157-232 (497)
233 4g26_A Pentatricopeptide repea 95.6 0.15 5.1E-06 49.4 13.2 89 181-272 113-204 (501)
234 3ffl_A Anaphase-promoting comp 95.3 0.028 9.5E-07 48.0 6.0 62 209-272 22-92 (167)
235 1ya0_A SMG-7 transcript varian 95.2 0.059 2E-06 52.9 8.7 62 209-272 154-215 (497)
236 4h7y_A Dual specificity protei 94.7 0.13 4.4E-06 43.6 8.4 61 185-246 72-132 (161)
237 4g26_A Pentatricopeptide repea 94.4 0.3 1E-05 47.3 11.4 84 187-272 84-169 (501)
238 1zbp_A Hypothetical protein VP 94.1 0.11 3.9E-06 47.4 7.4 55 220-275 9-63 (273)
239 3mkq_A Coatomer beta'-subunit; 94.0 0.21 7.3E-06 48.7 9.6 65 203-268 677-761 (814)
240 3kae_A CDC27, possible protein 93.4 1.1 3.8E-05 39.2 11.8 93 175-274 35-145 (242)
241 3mkq_B Coatomer subunit alpha; 91.9 1.9 6.4E-05 36.8 11.3 48 181-234 13-60 (177)
242 4gns_B Protein CSD3, chitin bi 91.1 0.41 1.4E-05 49.4 7.5 95 182-277 257-371 (754)
243 2ff4_A Probable regulatory pro 91.0 0.66 2.3E-05 43.3 8.3 53 183-236 181-233 (388)
244 4b4t_R RPN7, 26S proteasome re 90.8 1.1 3.8E-05 42.4 9.7 93 178-272 136-237 (429)
245 3txn_A 26S proteasome regulato 90.3 1.8 6E-05 41.2 10.6 93 178-272 104-210 (394)
246 4b4t_P 26S proteasome regulato 90.2 3.1 0.00011 39.6 12.3 94 177-272 141-247 (445)
247 2o8p_A 14-3-3 domain containin 88.2 3.3 0.00011 36.8 10.1 60 178-237 129-197 (227)
248 3mkq_B Coatomer subunit alpha; 87.2 2.5 8.5E-05 36.1 8.4 55 205-269 6-60 (177)
249 3mkq_A Coatomer beta'-subunit; 86.6 1.9 6.4E-05 41.9 8.3 43 221-269 665-707 (814)
250 4b4t_S RPN3, 26S proteasome re 86.2 1.2 4.3E-05 44.0 6.8 66 207-276 231-303 (523)
251 3spa_A Mtrpol, DNA-directed RN 85.1 9 0.00031 41.2 13.0 87 182-272 136-230 (1134)
252 3esl_A Checkpoint serine/threo 83.9 5.7 0.0002 34.6 9.2 77 194-273 58-145 (202)
253 3kae_A CDC27, possible protein 83.2 22 0.00076 31.0 12.4 69 172-241 60-147 (242)
254 3iqu_A 14-3-3 protein sigma; s 81.7 6.2 0.00021 35.1 8.8 47 190-236 150-204 (236)
255 1qsa_A Protein (soluble lytic 79.9 5.6 0.00019 39.8 8.7 80 189-271 268-347 (618)
256 4fhn_B Nucleoporin NUP120; pro 77.9 7.3 0.00025 41.3 9.3 75 199-275 834-931 (1139)
257 2br9_A 14-3-3E, 14-3-3 protein 76.9 6.2 0.00021 35.0 7.2 47 190-236 147-201 (234)
258 1wy6_A Hypothetical protein ST 76.3 15 0.00052 30.9 8.8 80 187-272 75-154 (172)
259 4gq2_M Nucleoporin NUP120; bet 76.2 5.8 0.0002 41.4 7.9 76 197-274 830-928 (950)
260 2npm_A 14-3-3 domain containin 76.0 6.6 0.00023 35.5 7.2 48 190-237 173-227 (260)
261 3iqu_A 14-3-3 protein sigma; s 75.3 44 0.0015 29.6 12.4 47 225-271 150-204 (236)
262 3efz_A 14-3-3 protein; 14-3-3, 75.2 4.9 0.00017 36.5 6.1 49 189-237 168-226 (268)
263 3uzd_A 14-3-3 protein gamma; s 74.8 7.5 0.00026 34.9 7.2 47 190-236 148-202 (248)
264 4b4t_R RPN7, 26S proteasome re 74.4 2.9 0.0001 39.4 4.6 64 207-272 131-197 (429)
265 1o9d_A 14-3-3-like protein C; 74.3 7.7 0.00026 35.0 7.2 47 190-236 152-206 (260)
266 3ubw_A 14-3-3E, 14-3-3 protein 72.5 9.1 0.00031 34.6 7.2 47 190-236 173-227 (261)
267 4a1g_A Mitotic checkpoint seri 72.1 18 0.00062 29.9 8.4 47 226-273 83-131 (152)
268 2v6y_A AAA family ATPase, P60 71.2 7.4 0.00025 28.8 5.3 19 219-237 22-40 (83)
269 2w2u_A Hypothetical P60 katani 70.6 7.8 0.00027 28.8 5.3 19 219-237 30-48 (83)
270 2v6y_A AAA family ATPase, P60 68.2 7.6 0.00026 28.7 4.8 45 189-242 8-52 (83)
271 2w2u_A Hypothetical P60 katani 67.4 8.1 0.00028 28.7 4.8 46 188-242 15-60 (83)
272 4b4t_S RPN3, 26S proteasome re 67.2 6.1 0.00021 39.1 5.2 58 181-241 239-303 (523)
273 4fhn_B Nucleoporin NUP120; pro 64.5 12 0.0004 39.7 7.1 88 178-267 846-962 (1139)
274 1wfd_A Hypothetical protein 15 62.6 13 0.00046 27.9 5.3 35 187-237 10-44 (93)
275 3re2_A Predicted protein; meni 62.0 22 0.00077 34.1 7.7 65 205-271 253-324 (472)
276 3txn_A 26S proteasome regulato 61.7 19 0.00065 34.0 7.4 81 190-272 76-168 (394)
277 2cpt_A SKD1 protein, vacuolar 60.5 14 0.00047 29.2 5.2 33 189-237 15-47 (117)
278 4a5x_A MITD1, MIT domain-conta 60.5 14 0.00047 27.6 5.0 19 219-237 27-45 (86)
279 1p4b_L Antibody variable light 60.2 3.2 0.00011 32.7 1.4 15 142-156 110-124 (135)
280 4a5x_A MITD1, MIT domain-conta 60.1 14 0.00047 27.6 4.9 47 187-242 11-57 (86)
281 2o8p_A 14-3-3 domain containin 59.5 44 0.0015 29.5 8.8 52 221-272 138-197 (227)
282 1wfd_A Hypothetical protein 15 58.3 14 0.00049 27.8 4.8 16 186-201 28-43 (93)
283 2cpt_A SKD1 protein, vacuolar 58.0 52 0.0018 25.8 8.2 15 187-201 32-46 (117)
284 2br9_A 14-3-3E, 14-3-3 protein 57.4 28 0.00094 30.8 7.2 47 225-271 147-201 (234)
285 2v6x_A Vacuolar protein sortin 57.2 20 0.00067 26.2 5.3 33 189-237 10-42 (85)
286 1wy6_A Hypothetical protein ST 56.7 36 0.0012 28.6 7.3 55 183-238 101-155 (172)
287 3t5v_B Nuclear mRNA export pro 55.7 15 0.0005 35.6 5.5 86 188-275 141-253 (455)
288 2npm_A 14-3-3 domain containin 55.4 30 0.001 31.1 7.2 47 225-271 173-226 (260)
289 2l6f_A Focal adhesion kinase 1 59.9 2.6 8.7E-05 37.1 0.0 6 105-110 129-134 (215)
290 1o9d_A 14-3-3-like protein C; 54.2 32 0.0011 30.9 7.2 47 225-271 152-206 (260)
291 2ijq_A Hypothetical protein; s 54.1 57 0.002 27.1 8.3 54 216-271 41-103 (161)
292 3u84_A Menin; MLL, JUND, ledgf 54.1 35 0.0012 33.4 7.6 64 206-271 276-346 (550)
293 4aez_C MAD3, mitotic spindle c 53.6 64 0.0022 28.3 8.9 48 225-273 131-180 (223)
294 3uzd_A 14-3-3 protein gamma; s 53.6 34 0.0012 30.6 7.2 48 224-271 147-202 (248)
295 3ax2_A Mitochondrial import re 53.2 33 0.0011 25.1 5.8 35 212-247 22-56 (73)
296 2v6x_A Vacuolar protein sortin 51.9 22 0.00075 26.0 4.8 16 186-201 26-41 (85)
297 2wvi_A Mitotic checkpoint seri 51.7 87 0.003 26.0 9.0 73 193-273 43-126 (164)
298 4gq4_A Menin; tumor suppressor 50.1 42 0.0014 32.7 7.5 65 205-271 260-331 (489)
299 3t5x_A PCI domain-containing p 49.5 39 0.0013 28.7 6.7 76 177-261 18-97 (203)
300 2wpv_A GET4, UPF0363 protein Y 48.4 30 0.001 31.7 6.1 66 205-271 132-216 (312)
301 2i9o_A MHB8A peptide; beta-hai 48.0 13 0.00045 23.2 2.5 8 173-180 21-28 (37)
302 3spa_A Mtrpol, DNA-directed RN 47.6 72 0.0025 34.4 9.6 61 209-272 129-194 (1134)
303 4b4t_O 26S proteasome regulato 47.0 1.2E+02 0.0041 28.1 10.2 86 185-271 88-197 (393)
304 2i7u_A Four-alpha-helix bundle 46.9 3.2 0.00011 28.7 -0.5 8 191-198 47-54 (62)
305 4a1g_A Mitotic checkpoint seri 46.2 92 0.0032 25.6 8.2 55 190-245 82-138 (152)
306 4gq2_M Nucleoporin NUP120; bet 45.2 36 0.0012 35.4 6.8 52 213-270 816-867 (950)
307 3efz_A 14-3-3 protein; 14-3-3, 44.5 34 0.0011 31.0 5.7 49 224-272 168-226 (268)
308 3ubw_A 14-3-3E, 14-3-3 protein 43.1 31 0.0011 31.1 5.2 47 225-271 173-227 (261)
309 2cfu_A SDSA1; SDS-hydrolase, l 43.1 45 0.0015 33.3 6.9 44 212-257 454-497 (658)
310 3ax2_A Mitochondrial import re 42.3 32 0.0011 25.1 4.3 28 247-275 22-49 (73)
311 1om2_A Protein (mitochondrial 41.8 38 0.0013 26.0 4.8 30 213-244 26-55 (95)
312 2crb_A Nuclear receptor bindin 41.8 40 0.0014 26.0 4.9 29 207-236 15-43 (97)
313 3lpz_A GET4 (YOR164C homolog); 41.7 1.8E+02 0.0062 26.9 10.4 67 204-271 133-215 (336)
314 4aez_C MAD3, mitotic spindle c 41.6 1.3E+02 0.0043 26.4 8.8 54 189-243 130-185 (223)
315 2dl1_A Spartin; SPG20, MIT, st 41.5 19 0.00064 28.8 3.1 15 222-236 36-50 (116)
316 3lew_A SUSD-like carbohydrate 41.0 77 0.0026 30.2 8.0 30 242-272 203-232 (495)
317 2wvi_A Mitotic checkpoint seri 40.2 1.4E+02 0.0047 24.8 8.5 54 190-244 77-132 (164)
318 3esl_A Checkpoint serine/threo 38.3 1.9E+02 0.0066 24.8 9.9 56 187-243 93-150 (202)
319 2crb_A Nuclear receptor bindin 38.3 49 0.0017 25.6 4.9 16 184-199 26-41 (97)
320 4b4t_P 26S proteasome regulato 37.5 1.3E+02 0.0043 28.3 8.8 60 209-270 139-204 (445)
321 1om2_A Protein (mitochondrial 36.8 42 0.0015 25.7 4.4 27 181-207 28-54 (95)
322 3lew_A SUSD-like carbohydrate 36.5 75 0.0026 30.3 7.1 31 207-238 203-233 (495)
323 3kez_A Putative sugar binding 36.0 87 0.003 29.4 7.4 47 225-272 171-225 (461)
324 3myv_A SUSD superfamily protei 35.0 1E+02 0.0034 28.9 7.7 47 225-272 165-219 (454)
325 3myv_A SUSD superfamily protei 34.4 88 0.003 29.3 7.2 47 190-237 165-219 (454)
326 3snx_A SUSD homolog, putative 34.1 19 0.00065 34.2 2.5 29 242-271 191-219 (460)
327 2ca5_A MXIH; transport protein 34.1 41 0.0014 25.4 3.8 27 222-248 24-50 (85)
328 3kez_A Putative sugar binding 33.5 88 0.003 29.4 7.0 30 207-237 196-225 (461)
329 1qsa_A Protein (soluble lytic 30.1 77 0.0026 31.6 6.2 55 181-236 293-347 (618)
330 3t5v_B Nuclear mRNA export pro 30.0 1.2E+02 0.0042 29.0 7.4 60 181-241 184-254 (455)
331 2rpa_A Katanin P60 ATPase-cont 27.9 53 0.0018 24.2 3.5 26 211-237 16-41 (78)
332 4ah2_B HLA class II histocompa 27.7 11 0.00038 32.7 -0.4 15 141-155 11-25 (229)
333 3mcx_A SUSD superfamily protei 27.2 1E+02 0.0035 28.9 6.3 47 191-238 178-232 (477)
334 3mcx_A SUSD superfamily protei 27.1 1.4E+02 0.0046 28.1 7.1 48 225-273 177-232 (477)
335 2rpa_A Katanin P60 ATPase-cont 26.5 57 0.0019 24.0 3.4 26 246-272 16-41 (78)
336 2wpv_A GET4, UPF0363 protein Y 26.2 2.7E+02 0.0092 25.2 8.7 27 240-267 132-158 (312)
337 3hdx_A SUSD homolog, SUSD supe 25.7 1.4E+02 0.0047 28.1 6.8 30 242-272 197-226 (478)
338 3pmr_A Amyloid-like protein 1; 24.0 1.8E+02 0.0061 25.5 6.7 54 188-241 107-161 (219)
339 3t5x_A PCI domain-containing p 24.0 1E+02 0.0036 25.9 5.2 35 208-243 15-49 (203)
340 2cwy_A Hypothetical protein TT 23.6 2.1E+02 0.0073 21.2 6.3 19 221-239 14-32 (94)
341 2dl1_A Spartin; SPG20, MIT, st 23.6 47 0.0016 26.4 2.6 46 186-240 16-61 (116)
342 3hdx_A SUSD homolog, SUSD supe 22.5 1.4E+02 0.005 27.9 6.3 30 207-237 197-226 (478)
343 2ijq_A Hypothetical protein; s 22.5 2.9E+02 0.0098 22.8 7.4 52 186-237 45-104 (161)
344 3re2_A Predicted protein; meni 21.4 1.6E+02 0.0055 28.3 6.2 46 191-237 275-325 (472)
345 3qnk_A Putative lipoprotein; a 20.8 1.7E+02 0.006 27.7 6.6 46 226-272 155-211 (517)
346 3snx_A SUSD homolog, putative 20.2 1.4E+02 0.0049 28.1 5.7 31 206-237 190-220 (460)
No 1
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.74 E-value=3.7e-17 Score=129.98 Aligned_cols=95 Identities=19% Similarity=0.228 Sum_probs=91.2
Q ss_pred HHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 023753 180 NNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDA 259 (277)
Q Consensus 180 ~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~ 259 (277)
+..+...|++++|+.+|++||+++|.++.+|+++|.++. ..|++++|+.+|++||+++|+++.+++++|.++.. +|++
T Consensus 20 G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~-~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~-~~~~ 97 (126)
T 4gco_A 20 GNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLT-KLMEFQRALDDCDTCIRLDSKFIKGYIRKAACLVA-MREW 97 (126)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHH-hhccHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHH-CCCH
Confidence 356777899999999999999999999999999999997 89999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHHHhCCCC
Q 023753 260 SRAESYFDQAVKSAPDD 276 (277)
Q Consensus 260 deAi~~yekALeldPdD 276 (277)
++|+.+|++|++++|++
T Consensus 98 ~~A~~~~~~al~l~P~~ 114 (126)
T 4gco_A 98 SKAQRAYEDALQVDPSN 114 (126)
T ss_dssp HHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHCcCC
Confidence 99999999999999987
No 2
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.69 E-value=2.4e-16 Score=130.85 Aligned_cols=94 Identities=13% Similarity=0.141 Sum_probs=89.9
Q ss_pred HHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 023753 181 NYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDAS 260 (277)
Q Consensus 181 ~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~d 260 (277)
..+...|++++|+.+|+++++++|+++.+|+++|.++. ..|++++|+.+|++|++++|+++.+++++|.+|.. +|+++
T Consensus 44 ~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~-~~g~~~~Ai~~~~~al~l~P~~~~~~~~lg~~~~~-lg~~~ 121 (151)
T 3gyz_A 44 YDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQ-IKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLR-LKAPL 121 (151)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHH-TTCHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HHccHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHH-cCCHH
Confidence 56667899999999999999999999999999999997 89999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHHhCCCC
Q 023753 261 RAESYFDQAVKSAPDD 276 (277)
Q Consensus 261 eAi~~yekALeldPdD 276 (277)
+|+.+|++|++++|+.
T Consensus 122 eA~~~~~~al~l~~~~ 137 (151)
T 3gyz_A 122 KAKECFELVIQHSNDE 137 (151)
T ss_dssp HHHHHHHHHHHHCCCH
T ss_pred HHHHHHHHHHHhCCCH
Confidence 9999999999999974
No 3
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.68 E-value=3.5e-16 Score=127.10 Aligned_cols=97 Identities=14% Similarity=0.174 Sum_probs=90.2
Q ss_pred hHHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC
Q 023753 178 SNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHK 257 (277)
Q Consensus 178 yY~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~G 257 (277)
.+..+|...+++++|+.+|+++|+++|+++.+|+++|.++. ..+++++|+.+|++|++++|+++.+++++|.++.. .+
T Consensus 36 ~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~-~~ 113 (150)
T 4ga2_A 36 YFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYE-LEENTDKAVECYRRSVELNPTQKDLVLKIAELLCK-ND 113 (150)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HC
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCchHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cC
Confidence 35678888999999999999999999999999999999997 89999999999999999999999999999999999 99
Q ss_pred CHHHHHHH-HHHHHHhCCCC
Q 023753 258 DASRAESY-FDQAVKSAPDD 276 (277)
Q Consensus 258 d~deAi~~-yekALeldPdD 276 (277)
++++|+.. +++|++++|++
T Consensus 114 ~~~~aa~~~~~~al~l~P~~ 133 (150)
T 4ga2_A 114 VTDGRAKYWVERAAKLFPGS 133 (150)
T ss_dssp SSSSHHHHHHHHHHHHSTTC
T ss_pred ChHHHHHHHHHHHHHhCcCC
Confidence 99876654 69999999987
No 4
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.65 E-value=1.9e-15 Score=122.42 Aligned_cols=95 Identities=18% Similarity=0.227 Sum_probs=90.8
Q ss_pred HHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 023753 180 NNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDA 259 (277)
Q Consensus 180 ~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~ 259 (277)
...+...+++++|+.+|+++++++|+++.+++++|.++. ..+++++|+.+|++|++++|+++.+++++|.++.. .+++
T Consensus 18 g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~ 95 (164)
T 3sz7_A 18 GNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYS-ASGQHEKAAEDAELATVVDPKYSKAWSRLGLARFD-MADY 95 (164)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHH-HccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-ccCH
Confidence 356667899999999999999999999999999999997 89999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHHHhCCCC
Q 023753 260 SRAESYFDQAVKSAPDD 276 (277)
Q Consensus 260 deAi~~yekALeldPdD 276 (277)
++|+.+|+++++++|++
T Consensus 96 ~~A~~~~~~al~~~p~~ 112 (164)
T 3sz7_A 96 KGAKEAYEKGIEAEGNG 112 (164)
T ss_dssp HHHHHHHHHHHHHHSSS
T ss_pred HHHHHHHHHHHHhCCCc
Confidence 99999999999999987
No 5
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.65 E-value=1.7e-15 Score=123.17 Aligned_cols=95 Identities=8% Similarity=0.016 Sum_probs=90.3
Q ss_pred HHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 023753 180 NNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDA 259 (277)
Q Consensus 180 ~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~ 259 (277)
...+...|++++|+.+|+++++++|+++.+|+++|.++. ..|++++|+.+|++|+.++|+++.+++++|.++.. .|++
T Consensus 28 g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~-~g~~ 105 (148)
T 2vgx_A 28 AFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQ-AMGQYDLAIHSYSYGAVMDIXEPRFPFHAAECLLQ-XGEL 105 (148)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHH-TTCH
T ss_pred HHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHH-HHhhHHHHHHHHHHHHhcCCCCchHHHHHHHHHHH-cCCH
Confidence 356667899999999999999999999999999999997 89999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHHHhCCCC
Q 023753 260 SRAESYFDQAVKSAPDD 276 (277)
Q Consensus 260 deAi~~yekALeldPdD 276 (277)
++|+.+|+++++++|++
T Consensus 106 ~~A~~~~~~al~~~p~~ 122 (148)
T 2vgx_A 106 AEAESGLFLAQELIANX 122 (148)
T ss_dssp HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHCcCC
Confidence 99999999999999875
No 6
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.64 E-value=2.3e-15 Score=116.31 Aligned_cols=91 Identities=21% Similarity=0.116 Sum_probs=87.5
Q ss_pred HHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 023753 181 NYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDAS 260 (277)
Q Consensus 181 ~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~d 260 (277)
..+...+++++|+.+|+++++++|+++.+++++|.++. ..+++++|+.+|++|++++|+++.+++.+|.++.. .|+++
T Consensus 12 ~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~~~~~ 89 (126)
T 3upv_A 12 KEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALA-KLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIA-VKEYA 89 (126)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-HhCHH
Confidence 55667899999999999999999999999999999997 89999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHHhC
Q 023753 261 RAESYFDQAVKSA 273 (277)
Q Consensus 261 eAi~~yekALeld 273 (277)
+|+.+|+++++++
T Consensus 90 ~A~~~~~~al~~~ 102 (126)
T 3upv_A 90 SALETLDAARTKD 102 (126)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC
Confidence 9999999999999
No 7
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.64 E-value=1.9e-15 Score=120.49 Aligned_cols=94 Identities=14% Similarity=0.018 Sum_probs=89.7
Q ss_pred HHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 023753 181 NYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDAS 260 (277)
Q Consensus 181 ~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~d 260 (277)
..+...+++++|+.+|+++++++|+++.+|+++|.++. ..+++++|+.+|++|+.++|+++.+++++|.++.. .|+++
T Consensus 26 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~~ 103 (142)
T 2xcb_A 26 FNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQ-SLGLYEQALQSYSYGALMDINEPRFPFHAAECHLQ-LGDLD 103 (142)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHH-TTCHH
T ss_pred HHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHH-HHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHH-cCCHH
Confidence 55667899999999999999999999999999999997 89999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHHhCCCC
Q 023753 261 RAESYFDQAVKSAPDD 276 (277)
Q Consensus 261 eAi~~yekALeldPdD 276 (277)
+|+.+|+++++++|++
T Consensus 104 ~A~~~~~~al~~~p~~ 119 (142)
T 2xcb_A 104 GAESGFYSARALAAAQ 119 (142)
T ss_dssp HHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhCCCC
Confidence 9999999999999875
No 8
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.64 E-value=1.4e-15 Score=119.79 Aligned_cols=94 Identities=12% Similarity=-0.019 Sum_probs=85.5
Q ss_pred HHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 023753 181 NYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDAS 260 (277)
Q Consensus 181 ~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~d 260 (277)
..+...|++++|+..|+++++++|+++.+|+++|.++. ..|++++|+.+|++|++++|+++.+++.+|.++.. .|+++
T Consensus 25 ~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~-~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~-~g~~~ 102 (121)
T 1hxi_A 25 LSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQA-ENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTN-EHNAN 102 (121)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCHH
Confidence 45667899999999999999999999999999999997 89999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHHhCCCC
Q 023753 261 RAESYFDQAVKSAPDD 276 (277)
Q Consensus 261 eAi~~yekALeldPdD 276 (277)
+|+.+|+++++++|++
T Consensus 103 ~A~~~~~~al~~~P~~ 118 (121)
T 1hxi_A 103 AALASLRAWLLSQPQY 118 (121)
T ss_dssp HHHHHHHHHHC-----
T ss_pred HHHHHHHHHHHhCcCC
Confidence 9999999999999975
No 9
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.63 E-value=3e-15 Score=118.54 Aligned_cols=95 Identities=20% Similarity=0.292 Sum_probs=87.4
Q ss_pred HHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH-------HHHHHHHHH
Q 023753 179 NNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDG-------NILSLYADL 251 (277)
Q Consensus 179 Y~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~-------~al~~LA~l 251 (277)
.+..+...+++++|+.+|++||+++|+++.+|+++|.++. ..+++++|+++|++||+++|++. .++.++|.+
T Consensus 14 lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~lg~~ 92 (127)
T 4gcn_A 14 LGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYF-EEKKFAECVQFCEKAVEVGRETRADYKLIAKAMSRAGNA 92 (127)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHH-HhhhHHHHHHHHHHHHHhCcccchhhHHHHHHHHHHHHH
Confidence 3466777899999999999999999999999999999997 89999999999999999998763 578889999
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCC
Q 023753 252 IWQAHKDASRAESYFDQAVKSAPD 275 (277)
Q Consensus 252 l~~~~Gd~deAi~~yekALeldPd 275 (277)
+.. ++++++|+.+|+++|+..|+
T Consensus 93 ~~~-~~~~~~A~~~~~kal~~~~~ 115 (127)
T 4gcn_A 93 FQK-QNDLSLAVQWFHRSLSEFRD 115 (127)
T ss_dssp HHH-TTCHHHHHHHHHHHHHHSCC
T ss_pred HHH-cCCHHHHHHHHHHHHhhCcC
Confidence 998 99999999999999999886
No 10
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.59 E-value=6.8e-15 Score=118.88 Aligned_cols=95 Identities=16% Similarity=0.121 Sum_probs=89.3
Q ss_pred HHHHHhCCCcHHHHHHHHHHHHh------------------CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 023753 180 NNYSNNNHGSSSTDAYYEKMIEA------------------NPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSD 241 (277)
Q Consensus 180 ~~m~e~~Gd~deAi~~yekALel------------------dP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n 241 (277)
+..+...+++++|+.+|++||++ +|.+..+++++|.++. ..+++++|+.+|++||+++|++
T Consensus 18 G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~-~~~~~~~A~~~~~~al~~~p~~ 96 (162)
T 3rkv_A 18 GNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYL-NIGDLHEAEETSSEVLKREETN 96 (162)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHH-hcCcHHHHHHHHHHHHhcCCcc
Confidence 35566789999999999999999 7788899999999997 8999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 023753 242 GNILSLYADLIWQAHKDASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 242 ~~al~~LA~ll~~~~Gd~deAi~~yekALeldPdD 276 (277)
+.+++.+|.++.. +|++++|+.+|++|++++|++
T Consensus 97 ~~a~~~~g~~~~~-~g~~~~A~~~~~~al~l~p~~ 130 (162)
T 3rkv_A 97 EKALFRRAKARIA-AWKLDEAEEDLKLLLRNHPAA 130 (162)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCGGG
T ss_pred hHHHHHHHHHHHH-HhcHHHHHHHHHHHHhcCCCC
Confidence 9999999999999 999999999999999999986
No 11
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.59 E-value=7.1e-16 Score=125.29 Aligned_cols=94 Identities=10% Similarity=0.065 Sum_probs=88.4
Q ss_pred HHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 023753 181 NYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDAS 260 (277)
Q Consensus 181 ~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~d 260 (277)
.++...+++++|+..|++++..+|+++.+++++|.+|. ..+++++|+++|++|++++|+++.+++.+|.++.. .++++
T Consensus 5 ~~~~~~~~~e~ai~~~~~a~~~~p~~~~~~~~la~~y~-~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~-~~~~~ 82 (150)
T 4ga2_A 5 SMRRSKADVERYIASVQGSTPSPRQKSIKGFYFAKLYY-EAKEYDLAKKYICTYINVQERDPKAHRFLGLLYEL-EENTD 82 (150)
T ss_dssp --CCCHHHHHHHHHHHHHHSCSHHHHHTTHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHH
T ss_pred HHHHHcChHHHHHHHHHHhcccCcccHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCchH
Confidence 44556789999999999999999999999999999997 89999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHHhCCCC
Q 023753 261 RAESYFDQAVKSAPDD 276 (277)
Q Consensus 261 eAi~~yekALeldPdD 276 (277)
+|+.+|++|++++|++
T Consensus 83 ~A~~~~~~al~~~p~~ 98 (150)
T 4ga2_A 83 KAVECYRRSVELNPTQ 98 (150)
T ss_dssp HHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHhCCCC
Confidence 9999999999999987
No 12
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.58 E-value=1.8e-14 Score=111.33 Aligned_cols=94 Identities=17% Similarity=0.082 Sum_probs=89.5
Q ss_pred HHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 023753 180 NNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDA 259 (277)
Q Consensus 180 ~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~ 259 (277)
...+...+++++|+.+|+++++++|+++.+++++|.++. ..+++++|+.+|++|++++|+++.+++.+|.++.. .+++
T Consensus 16 g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~~~~ 93 (137)
T 3q49_B 16 GNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYL-KMQQPEQALADCRRALELDGQSVKAHFFLGQCQLE-MESY 93 (137)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCH
T ss_pred HHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCchhHHHHHHHHHHHHH-HhhH
Confidence 356667899999999999999999999999999999997 89999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHHHhCCC
Q 023753 260 SRAESYFDQAVKSAPD 275 (277)
Q Consensus 260 deAi~~yekALeldPd 275 (277)
++|+.+|+++++++|+
T Consensus 94 ~~A~~~~~~a~~~~p~ 109 (137)
T 3q49_B 94 DEAIANLQRAYSLAKE 109 (137)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHChh
Confidence 9999999999999886
No 13
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.58 E-value=5.5e-14 Score=103.86 Aligned_cols=95 Identities=19% Similarity=0.209 Sum_probs=89.9
Q ss_pred HHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 023753 180 NNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDA 259 (277)
Q Consensus 180 ~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~ 259 (277)
...+...+++++|+.+|+++++.+|+++.++.++|.++. ..+++++|+.+|+++++++|+++.++..+|.++.. .+++
T Consensus 11 ~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~-~~~~ 88 (118)
T 1elw_A 11 GNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYA-KKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEF-LNRF 88 (118)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCH
T ss_pred HHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHH-hhccHHHHHHHHHHHHHhCcccHHHHHHHHHHHHH-HhhH
Confidence 355667899999999999999999999999999999987 79999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHHHhCCCC
Q 023753 260 SRAESYFDQAVKSAPDD 276 (277)
Q Consensus 260 deAi~~yekALeldPdD 276 (277)
++|+.+|+++++++|++
T Consensus 89 ~~A~~~~~~~~~~~~~~ 105 (118)
T 1elw_A 89 EEAKRTYEEGLKHEANN 105 (118)
T ss_dssp HHHHHHHHHHHTTCTTC
T ss_pred HHHHHHHHHHHHcCCCC
Confidence 99999999999999986
No 14
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.58 E-value=5.5e-14 Score=106.58 Aligned_cols=94 Identities=20% Similarity=0.156 Sum_probs=89.4
Q ss_pred HHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 023753 181 NYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDAS 260 (277)
Q Consensus 181 ~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~d 260 (277)
..+...+++++|+.+|+++++.+|+++.+++++|.++. ..+++++|+.+|+++++++|+++.+++.+|.++.. .++++
T Consensus 24 ~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~-~~~~~ 101 (133)
T 2lni_A 24 NECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYT-KLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEA-MKDYT 101 (133)
T ss_dssp HHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHT-TTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH-HhccHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH-HhhHH
Confidence 55667899999999999999999999999999999987 89999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHHhCCCC
Q 023753 261 RAESYFDQAVKSAPDD 276 (277)
Q Consensus 261 eAi~~yekALeldPdD 276 (277)
+|+.+|+++++++|++
T Consensus 102 ~A~~~~~~~~~~~p~~ 117 (133)
T 2lni_A 102 KAMDVYQKALDLDSSC 117 (133)
T ss_dssp HHHHHHHHHHHHCGGG
T ss_pred HHHHHHHHHHHhCCCc
Confidence 9999999999999975
No 15
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.57 E-value=3e-15 Score=115.51 Aligned_cols=89 Identities=17% Similarity=0.242 Sum_probs=82.3
Q ss_pred CCCcHHHHHHHHHHHHh---CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHH
Q 023753 186 NHGSSSTDAYYEKMIEA---NPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRA 262 (277)
Q Consensus 186 ~Gd~deAi~~yekALel---dP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~deA 262 (277)
.|++++|+.+|++|+++ +|+++.+++++|.++. ..+++++|+.+|++|++++|+++.+++++|.++.. .|++++|
T Consensus 3 ~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g~~~~A 80 (117)
T 3k9i_A 3 LGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFR-TLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYN-LGRYEQG 80 (117)
T ss_dssp ----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHH
T ss_pred CCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH-cCCHHHH
Confidence 47899999999999999 6999999999999997 89999999999999999999999999999999999 9999999
Q ss_pred HHHHHHHHHhCCCC
Q 023753 263 ESYFDQAVKSAPDD 276 (277)
Q Consensus 263 i~~yekALeldPdD 276 (277)
+.+|+++++..|++
T Consensus 81 ~~~~~~al~~~p~~ 94 (117)
T 3k9i_A 81 VELLLKIIAETSDD 94 (117)
T ss_dssp HHHHHHHHHHHCCC
T ss_pred HHHHHHHHHhCCCc
Confidence 99999999999986
No 16
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.57 E-value=2.6e-14 Score=116.35 Aligned_cols=96 Identities=14% Similarity=0.012 Sum_probs=90.1
Q ss_pred HHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCC
Q 023753 179 NNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKD 258 (277)
Q Consensus 179 Y~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd 258 (277)
....+...++++.|+..++++++++|+++.++..+|.++. ..|++++|+++|+++++++|+++.++.++|.++.. +|+
T Consensus 79 ~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~-~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~-~g~ 156 (184)
T 3vtx_A 79 LGSANFMIDEKQAAIDALQRAIALNTVYADAYYKLGLVYD-SMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEG-KGL 156 (184)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTC
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHH-HhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHH-CCC
Confidence 3456667799999999999999999999999999999997 89999999999999999999999999999999999 999
Q ss_pred HHHHHHHHHHHHHhCCCC
Q 023753 259 ASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 259 ~deAi~~yekALeldPdD 276 (277)
+++|+.+|++||+++|++
T Consensus 157 ~~~A~~~~~~al~~~p~~ 174 (184)
T 3vtx_A 157 RDEAVKYFKKALEKEEKK 174 (184)
T ss_dssp HHHHHHHHHHHHHTTHHH
T ss_pred HHHHHHHHHHHHhCCccC
Confidence 999999999999999964
No 17
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.57 E-value=9.4e-15 Score=124.57 Aligned_cols=94 Identities=14% Similarity=0.066 Sum_probs=87.9
Q ss_pred HHHHhCCCcHHHHHHHHHHHHhCCC-------CHH-----HHHHHHHHHHHHcCCHHHHHHHHHHHHHh-------CCCC
Q 023753 181 NYSNNNHGSSSTDAYYEKMIEANPG-------NAL-----LLGNYARFLKEVRGDFAKAEELCGRAILA-------NPSD 241 (277)
Q Consensus 181 ~m~e~~Gd~deAi~~yekALeldP~-------n~~-----al~nLA~lL~e~~Gd~eeA~e~~ekALel-------dP~n 241 (277)
..+...|++++|+.+|++||+++|+ +.. +|.|+|.++. ..|+|++|+.+|++||++ +|++
T Consensus 19 ~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~-~Lgr~~eAl~~~~kAL~l~n~~~e~~pd~ 97 (159)
T 2hr2_A 19 QRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALA-GLRSFDEALHSADKALHYFNRRGELNQDE 97 (159)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHCCTTSTH
T ss_pred HHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHhhhccccCCCch
Confidence 4556679999999999999999999 444 9999999997 899999999999999999 9999
Q ss_pred HHHH----HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 023753 242 GNIL----SLYADLIWQAHKDASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 242 ~~al----~~LA~ll~~~~Gd~deAi~~yekALeldPdD 276 (277)
+.+| ++.|.++.. +|++++|+..|++|++++|+|
T Consensus 98 ~~A~~~~~~~rG~aL~~-lgr~eEAl~~y~kAlel~p~d 135 (159)
T 2hr2_A 98 GKLWISAVYSRALALDG-LGRGAEAMPEFKKVVEMIEER 135 (159)
T ss_dssp HHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhHHHHHHH-CCCHHHHHHHHHHHHhcCCCc
Confidence 9999 999999999 999999999999999999987
No 18
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.57 E-value=1.9e-14 Score=122.06 Aligned_cols=94 Identities=13% Similarity=0.149 Sum_probs=88.9
Q ss_pred HHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHH----------------HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Q 023753 181 NYSNNNHGSSSTDAYYEKMIEANPGNALLLGN----------------YARFLKEVRGDFAKAEELCGRAILANPSDGNI 244 (277)
Q Consensus 181 ~m~e~~Gd~deAi~~yekALeldP~n~~al~n----------------LA~lL~e~~Gd~eeA~e~~ekALeldP~n~~a 244 (277)
..+...|++++|+.+|+++++++|+++.+++. +|.++. ..|++++|+.+|++|++++|+++.+
T Consensus 12 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~~~~~ 90 (208)
T 3urz_A 12 SAAIEAGQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYK-KNRNYDKAYLFYKELLQKAPNNVDC 90 (208)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHCCCCHHH
Confidence 34456799999999999999999999999999 999997 8999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 023753 245 LSLYADLIWQAHKDASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 245 l~~LA~ll~~~~Gd~deAi~~yekALeldPdD 276 (277)
++.+|.++.. .|++++|+.+|+++++++|++
T Consensus 91 ~~~lg~~~~~-~g~~~~A~~~~~~al~~~P~~ 121 (208)
T 3urz_A 91 LEACAEMQVC-RGQEKDALRMYEKILQLEADN 121 (208)
T ss_dssp HHHHHHHHHH-HTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHH-cCCHHHHHHHHHHHHHcCCCC
Confidence 9999999999 999999999999999999986
No 19
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.56 E-value=5.2e-14 Score=103.34 Aligned_cols=96 Identities=13% Similarity=0.056 Sum_probs=90.7
Q ss_pred HHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHHc
Q 023753 179 NNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPS--DGNILSLYADLIWQAH 256 (277)
Q Consensus 179 Y~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~--n~~al~~LA~ll~~~~ 256 (277)
....+...+++++|+.+|+++++++|.++.+++++|.++. ..+++++|+.+|+++++++|+ ++.++..+|.++.. .
T Consensus 12 ~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~~~~~~-~ 89 (112)
T 2kck_A 12 EGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALY-NLERYEEAVDCYNYVINVIEDEYNKDVWAAKADALRY-I 89 (112)
T ss_dssp HHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHHHHHTT-C
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHH-HccCHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHH-H
Confidence 4456667899999999999999999999999999999987 899999999999999999999 99999999999999 9
Q ss_pred -CCHHHHHHHHHHHHHhCCCC
Q 023753 257 -KDASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 257 -Gd~deAi~~yekALeldPdD 276 (277)
+++++|+++|++++...|.+
T Consensus 90 ~~~~~~A~~~~~~~~~~~p~~ 110 (112)
T 2kck_A 90 EGKEVEAEIAEARAKLEHHHH 110 (112)
T ss_dssp SSCSHHHHHHHHHHGGGCCCC
T ss_pred hCCHHHHHHHHHHHhhcccCC
Confidence 99999999999999999986
No 20
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.56 E-value=1.3e-13 Score=103.33 Aligned_cols=95 Identities=25% Similarity=0.350 Sum_probs=89.8
Q ss_pred HHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 023753 180 NNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDA 259 (277)
Q Consensus 180 ~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~ 259 (277)
...+...+++++|+.+|+++++.+|+++.++.++|.++. ..+++++|+.+|++++.++|+++.++..+|.++.. .+++
T Consensus 19 ~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 96 (131)
T 2vyi_A 19 GNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYS-KLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSS-LNKH 96 (131)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCH
T ss_pred HHHHHHccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH-HhhchHHHHHHHHHHHhcCccCHHHHHHHHHHHHH-hCCH
Confidence 355666899999999999999999999999999999987 89999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHHHhCCCC
Q 023753 260 SRAESYFDQAVKSAPDD 276 (277)
Q Consensus 260 deAi~~yekALeldPdD 276 (277)
++|+.+|+++++++|++
T Consensus 97 ~~A~~~~~~~~~~~p~~ 113 (131)
T 2vyi_A 97 VEAVAYYKKALELDPDN 113 (131)
T ss_dssp HHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHHHhcCccc
Confidence 99999999999999976
No 21
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.54 E-value=9.2e-14 Score=107.51 Aligned_cols=94 Identities=19% Similarity=0.117 Sum_probs=89.0
Q ss_pred HHHHhCCCcHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC
Q 023753 181 NYSNNNHGSSSTDAYYEKMIEANPGN---ALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHK 257 (277)
Q Consensus 181 ~m~e~~Gd~deAi~~yekALeldP~n---~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~G 257 (277)
..+...+++++|+.+|+++++++|++ ..+++++|.++. ..+++++|+.+|+++++++|+++.+++.+|.++.. .+
T Consensus 36 ~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~-~~ 113 (148)
T 2dba_A 36 NELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHL-KLEDYDKAETEASKAIEKDGGDVKALYRRSQALEK-LG 113 (148)
T ss_dssp HHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH-HT
T ss_pred HHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHH-HHccHHHHHHHHHHHHhhCccCHHHHHHHHHHHHH-cC
Confidence 55566799999999999999999998 899999999987 89999999999999999999999999999999999 99
Q ss_pred CHHHHHHHHHHHHHhCCCC
Q 023753 258 DASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 258 d~deAi~~yekALeldPdD 276 (277)
++++|+.+|+++++++|++
T Consensus 114 ~~~~A~~~~~~al~~~p~~ 132 (148)
T 2dba_A 114 RLDQAVLDLQRCVSLEPKN 132 (148)
T ss_dssp CHHHHHHHHHHHHHHCSSC
T ss_pred CHHHHHHHHHHHHHcCCCc
Confidence 9999999999999999986
No 22
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.54 E-value=4.5e-14 Score=120.51 Aligned_cols=96 Identities=15% Similarity=-0.002 Sum_probs=91.1
Q ss_pred HHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc--
Q 023753 179 NNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAH-- 256 (277)
Q Consensus 179 Y~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~-- 256 (277)
....+...|++++|+.+|+++++++|+++.+++++|.++. ..|++++|+.+|++|++++|+++.++.++|.++.. .
T Consensus 11 lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~-~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~-~~~ 88 (217)
T 2pl2_A 11 LGVQLYALGRYDAALTLFERALKENPQDPEALYWLARTQL-KLGLVNPALENGKTLVARTPRYLGGYMVLSEAYVA-LYR 88 (217)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-hhh
Confidence 3456677899999999999999999999999999999997 89999999999999999999999999999999999 9
Q ss_pred ---------CCHHHHHHHHHHHHHhCCCC
Q 023753 257 ---------KDASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 257 ---------Gd~deAi~~yekALeldPdD 276 (277)
|++++|+.+|++|++++|++
T Consensus 89 ~~~~~~~~~g~~~~A~~~~~~al~~~P~~ 117 (217)
T 2pl2_A 89 QAEDRERGKGYLEQALSVLKDAERVNPRY 117 (217)
T ss_dssp TCSSHHHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred hhhhhcccccCHHHHHHHHHHHHHhCccc
Confidence 99999999999999999986
No 23
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.54 E-value=1.4e-13 Score=105.18 Aligned_cols=94 Identities=13% Similarity=0.080 Sum_probs=88.6
Q ss_pred HHHHhCCCcHHHHHHHHHHHHhCCCCH---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHH
Q 023753 181 NYSNNNHGSSSTDAYYEKMIEANPGNA---LLLGNYARFLKEVRGDFAKAEELCGRAILANPSD---GNILSLYADLIWQ 254 (277)
Q Consensus 181 ~m~e~~Gd~deAi~~yekALeldP~n~---~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n---~~al~~LA~ll~~ 254 (277)
..+...+++++|+.+|+++++.+|+++ .+++.+|.++. ..|++++|+.+|++++..+|++ +.+++.+|.++..
T Consensus 10 ~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~-~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la~~~~~ 88 (129)
T 2xev_A 10 FDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYY-ATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLGLSQYG 88 (129)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHH-HhccHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHH
Confidence 455668999999999999999999998 79999999997 8999999999999999999999 8999999999999
Q ss_pred HcCCHHHHHHHHHHHHHhCCCC
Q 023753 255 AHKDASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 255 ~~Gd~deAi~~yekALeldPdD 276 (277)
.|++++|+.+|+++++..|++
T Consensus 89 -~g~~~~A~~~~~~~~~~~p~~ 109 (129)
T 2xev_A 89 -EGKNTEAQQTLQQVATQYPGS 109 (129)
T ss_dssp -TTCHHHHHHHHHHHHHHSTTS
T ss_pred -cCCHHHHHHHHHHHHHHCCCC
Confidence 999999999999999999986
No 24
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.53 E-value=1.9e-13 Score=107.73 Aligned_cols=94 Identities=21% Similarity=0.120 Sum_probs=89.4
Q ss_pred HHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 023753 181 NYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDAS 260 (277)
Q Consensus 181 ~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~d 260 (277)
..+...+++++|+.+|+++++++|.++.+++++|.++. ..+++++|+.+|+++++++|+++.+++.+|.++.. .|+++
T Consensus 21 ~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~-~~~~~ 98 (166)
T 1a17_A 21 NDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYL-RTECYGYALGDATRAIELDKKYIKGYYRRAASNMA-LGKFR 98 (166)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHH
T ss_pred HHHHHccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHH-hccHH
Confidence 45566899999999999999999999999999999987 89999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHHhCCCC
Q 023753 261 RAESYFDQAVKSAPDD 276 (277)
Q Consensus 261 eAi~~yekALeldPdD 276 (277)
+|+.+|+++++++|++
T Consensus 99 ~A~~~~~~a~~~~p~~ 114 (166)
T 1a17_A 99 AALRDYETVVKVKPHD 114 (166)
T ss_dssp HHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHHHhCCCC
Confidence 9999999999999986
No 25
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.53 E-value=2.3e-14 Score=122.09 Aligned_cols=89 Identities=19% Similarity=0.179 Sum_probs=82.1
Q ss_pred CCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 023753 186 NHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGD----------FAKAEELCGRAILANPSDGNILSLYADLIWQA 255 (277)
Q Consensus 186 ~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd----------~eeA~e~~ekALeldP~n~~al~~LA~ll~~~ 255 (277)
.+.+++|++.|++|++++|+++.+|+++|.++. ..++ +++|+.+|++||+++|+++.+|+++|.+|..
T Consensus 15 ~~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~-~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~- 92 (158)
T 1zu2_A 15 ILLFEQIRQDAENTYKSNPLDADNLTRWGGVLL-ELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTS- 92 (158)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-
T ss_pred HhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHH-
Confidence 367899999999999999999999999999886 5655 4699999999999999999999999999987
Q ss_pred c-----------CCHHHHHHHHHHHHHhCCCC
Q 023753 256 H-----------KDASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 256 ~-----------Gd~deAi~~yekALeldPdD 276 (277)
+ +++++|+++|++||+++|++
T Consensus 93 lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~ 124 (158)
T 1zu2_A 93 FAFLTPDETEAKHNFDLATQFFQQAVDEQPDN 124 (158)
T ss_dssp HHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred hcccCcchhhhhccHHHHHHHHHHHHHhCCCC
Confidence 6 48999999999999999986
No 26
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.53 E-value=6.9e-14 Score=142.81 Aligned_cols=96 Identities=20% Similarity=0.207 Sum_probs=68.6
Q ss_pred HHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCC
Q 023753 179 NNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKD 258 (277)
Q Consensus 179 Y~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd 258 (277)
++.++...|++++|+.+|++||+++|+++.+++++|.+|. ..|++++|+++|++|++++|+++.+++++|.+|.. +|+
T Consensus 15 LG~~~~~~G~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~-~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~~-~g~ 92 (723)
T 4gyw_A 15 LANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQ-QQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKE-MQD 92 (723)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTC
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCC
Confidence 3455666677777777777777777777777777777665 66777777777777777777777777777777776 777
Q ss_pred HHHHHHHHHHHHHhCCCC
Q 023753 259 ASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 259 ~deAi~~yekALeldPdD 276 (277)
+++|+++|++|++++|++
T Consensus 93 ~~~A~~~~~kAl~l~P~~ 110 (723)
T 4gyw_A 93 VQGALQCYTRAIQINPAF 110 (723)
T ss_dssp HHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHhCCCC
Confidence 777777777777777764
No 27
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.53 E-value=3.7e-13 Score=100.01 Aligned_cols=95 Identities=21% Similarity=0.346 Sum_probs=90.0
Q ss_pred HHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 023753 180 NNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDA 259 (277)
Q Consensus 180 ~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~ 259 (277)
...+...+++++|+.+|+++++.+|+++.+++.+|.++. ..+++++|+.+|++++.++|.++.++..+|.++.. .+++
T Consensus 16 ~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~ 93 (125)
T 1na0_A 16 GNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYY-KQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYK-QGDY 93 (125)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH-hcCH
Confidence 356667899999999999999999999999999999987 79999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHHHhCCCC
Q 023753 260 SRAESYFDQAVKSAPDD 276 (277)
Q Consensus 260 deAi~~yekALeldPdD 276 (277)
++|+.+|+++++++|++
T Consensus 94 ~~A~~~~~~~~~~~~~~ 110 (125)
T 1na0_A 94 DEAIEYYQKALELDPNN 110 (125)
T ss_dssp HHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHhCCCc
Confidence 99999999999999976
No 28
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.51 E-value=1.4e-13 Score=116.74 Aligned_cols=97 Identities=11% Similarity=0.169 Sum_probs=87.7
Q ss_pred HHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH---
Q 023753 179 NNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQA--- 255 (277)
Q Consensus 179 Y~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~--- 255 (277)
...++...+++++|+.+|+++++++|+++.+++++|.++. ..|++++|+.+|++|++++|+++.+++++|.+|+..
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~ 138 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQKAPNNVDCLEACAEMQV-CRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTAEQ 138 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhHH
Confidence 5567778899999999999999999999999999999997 899999999999999999999999999999877541
Q ss_pred -------------------------------cCCHHHHHHHHHHHHHhCCCC
Q 023753 256 -------------------------------HKDASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 256 -------------------------------~Gd~deAi~~yekALeldPdD 276 (277)
.+++++|+.+|++|++++|+.
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~ 190 (208)
T 3urz_A 139 EKKKLETDYKKLSSPTKMQYARYRDGLSKLFTTRYEKARNSLQKVILRFPST 190 (208)
T ss_dssp HHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTSCCH
T ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCH
Confidence 246889999999999999973
No 29
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.50 E-value=1.5e-13 Score=140.31 Aligned_cols=97 Identities=22% Similarity=0.148 Sum_probs=92.3
Q ss_pred hHHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC
Q 023753 178 SNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHK 257 (277)
Q Consensus 178 yY~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~G 257 (277)
.++.++...|++++|+.+|++||+++|+++.+|+++|.+|. ..|++++|+++|++|++++|+++.+++++|.+|.. +|
T Consensus 48 nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~-~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~-~g 125 (723)
T 4gyw_A 48 NLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLK-EMQDVQGALQCYTRAIQINPAFADAHSNLASIHKD-SG 125 (723)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TT
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cC
Confidence 34577778899999999999999999999999999999997 89999999999999999999999999999999999 99
Q ss_pred CHHHHHHHHHHHHHhCCCC
Q 023753 258 DASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 258 d~deAi~~yekALeldPdD 276 (277)
++++|+++|++|++++|++
T Consensus 126 ~~~eAi~~~~~Al~l~P~~ 144 (723)
T 4gyw_A 126 NIPEAIASYRTALKLKPDF 144 (723)
T ss_dssp CHHHHHHHHHHHHHHCSCC
T ss_pred CHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999986
No 30
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.49 E-value=3.4e-13 Score=112.26 Aligned_cols=94 Identities=12% Similarity=0.033 Sum_probs=89.0
Q ss_pred HHHHhCCCcHHHHHHHHHHHHhCCCCH----------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Q 023753 181 NYSNNNHGSSSTDAYYEKMIEANPGNA----------------LLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNI 244 (277)
Q Consensus 181 ~m~e~~Gd~deAi~~yekALeldP~n~----------------~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~a 244 (277)
..+...+++++|+.+|++++++.|.++ .+++++|.++. ..+++++|+.+|++|++++|+++.+
T Consensus 46 ~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~al~~~p~~~~~ 124 (198)
T 2fbn_A 46 NEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYN-KNKDYPKAIDHASKVLKIDKNNVKA 124 (198)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCcccHHH
Confidence 455668999999999999999999998 89999999997 8999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 023753 245 LSLYADLIWQAHKDASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 245 l~~LA~ll~~~~Gd~deAi~~yekALeldPdD 276 (277)
++.+|.++.. .+++++|+.+|+++++++|++
T Consensus 125 ~~~lg~~~~~-~~~~~~A~~~~~~al~~~p~~ 155 (198)
T 2fbn_A 125 LYKLGVANMY-FGFLEEAKENLYKAASLNPNN 155 (198)
T ss_dssp HHHHHHHHHH-HTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHH-cccHHHHHHHHHHHHHHCCCc
Confidence 9999999999 999999999999999999986
No 31
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.49 E-value=1.9e-13 Score=116.62 Aligned_cols=87 Identities=21% Similarity=0.158 Sum_probs=84.9
Q ss_pred CCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Q 023753 187 HGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYF 266 (277)
Q Consensus 187 Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~deAi~~y 266 (277)
|++++|+..|+++++++|+++.+++++|.++. ..|++++|+.+|++|++++ +++.++.++|.++.. .|++++|+.+|
T Consensus 98 g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~-~~~~~~~~la~~~~~-~g~~~~A~~~~ 174 (217)
T 2pl2_A 98 GYLEQALSVLKDAERVNPRYAPLHLQRGLVYA-LLGERDKAEASLKQALALE-DTPEIRSALAELYLS-MGRLDEALAQY 174 (217)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHH-HTCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCcccHHHHHHHHHHHH-HcCChHHHHHHHHHHHhcc-cchHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 89999999999999999999999999999997 8999999999999999999 999999999999999 99999999999
Q ss_pred HHHHHhCCCC
Q 023753 267 DQAVKSAPDD 276 (277)
Q Consensus 267 ekALeldPdD 276 (277)
+++++++|++
T Consensus 175 ~~al~~~P~~ 184 (217)
T 2pl2_A 175 AKALEQAPKD 184 (217)
T ss_dssp HHHHHHSTTC
T ss_pred HHHHHhCCCC
Confidence 9999999986
No 32
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.49 E-value=3.6e-13 Score=101.16 Aligned_cols=94 Identities=18% Similarity=0.314 Sum_probs=88.2
Q ss_pred HHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-------HHHHHHHHHHH
Q 023753 180 NNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSD-------GNILSLYADLI 252 (277)
Q Consensus 180 ~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n-------~~al~~LA~ll 252 (277)
...+...+++++|+.+|+++++.+|.++.+++++|.++. ..+++++|+.+|++++.++|++ +.+++.+|.++
T Consensus 11 ~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~ 89 (131)
T 1elr_A 11 GNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYF-EKGDYNKCRELCEKAIEVGRENREDYRQIAKAYARIGNSY 89 (131)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHH-HhccHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHH
Confidence 356667899999999999999999999999999999987 7999999999999999999887 99999999999
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCC
Q 023753 253 WQAHKDASRAESYFDQAVKSAPD 275 (277)
Q Consensus 253 ~~~~Gd~deAi~~yekALeldPd 275 (277)
.. .+++++|+.+|++++++.|+
T Consensus 90 ~~-~~~~~~A~~~~~~~~~~~~~ 111 (131)
T 1elr_A 90 FK-EEKYKDAIHFYNKSLAEHRT 111 (131)
T ss_dssp HH-TTCHHHHHHHHHHHHHHCCC
T ss_pred HH-hccHHHHHHHHHHHHHhCCC
Confidence 99 99999999999999999884
No 33
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.49 E-value=5.5e-13 Score=108.43 Aligned_cols=94 Identities=12% Similarity=0.100 Sum_probs=61.6
Q ss_pred HHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 023753 180 NNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDA 259 (277)
Q Consensus 180 ~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~ 259 (277)
+..+...|++++|+.+|++|++++|+++.++.++|.++. ..+++++|+.++++++..+|+++.++..+|.++.. .+++
T Consensus 12 G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 89 (184)
T 3vtx_A 12 GDKKRTKGDFDGAIRAYKKVLKADPNNVETLLKLGKTYM-DIGLPNDAIESLKKFVVLDTTSAEAYYILGSANFM-IDEK 89 (184)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-TTCH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHHHH-cCCH
Confidence 366777899999999999999999999999999998876 66766666555555555555554444444444444 4444
Q ss_pred HHHHHHHHHHHHhCCC
Q 023753 260 SRAESYFDQAVKSAPD 275 (277)
Q Consensus 260 deAi~~yekALeldPd 275 (277)
++|+.+++++++++|+
T Consensus 90 ~~a~~~~~~a~~~~~~ 105 (184)
T 3vtx_A 90 QAAIDALQRAIALNTV 105 (184)
T ss_dssp HHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHhCcc
Confidence 4444444444444443
No 34
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.49 E-value=3.7e-13 Score=109.35 Aligned_cols=98 Identities=14% Similarity=0.140 Sum_probs=90.2
Q ss_pred hHHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH--HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 023753 178 SNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDF--AKAEELCGRAILANPSDGNILSLYADLIWQA 255 (277)
Q Consensus 178 yY~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~--eeA~e~~ekALeldP~n~~al~~LA~ll~~~ 255 (277)
.+..++...+++++|+.+|+++++++|+++.++.++|.+++...+++ ++|+.+|+++++++|+++.+++.+|.+++.
T Consensus 49 ~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~- 127 (177)
T 2e2e_A 49 LLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITALMLLASDAFM- 127 (177)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-
Confidence 34466777899999999999999999999999999999833378998 999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHHhCCCC
Q 023753 256 HKDASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 256 ~Gd~deAi~~yekALeldPdD 276 (277)
.|++++|+.+|+++++++|++
T Consensus 128 ~g~~~~A~~~~~~al~~~p~~ 148 (177)
T 2e2e_A 128 QANYAQAIELWQKVMDLNSPR 148 (177)
T ss_dssp TTCHHHHHHHHHHHHHTCCTT
T ss_pred cccHHHHHHHHHHHHhhCCCC
Confidence 999999999999999999986
No 35
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.48 E-value=1.7e-13 Score=104.60 Aligned_cols=84 Identities=14% Similarity=0.134 Sum_probs=80.3
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 023753 190 SSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQA 269 (277)
Q Consensus 190 deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~deAi~~yekA 269 (277)
++|+.+|+++++.+|+++.+++++|.++. ..+++++|+.+|++|++++|+++.+++.+|.++.. .|++++|+.+|+++
T Consensus 2 ~~a~~~~~~al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~-~g~~~~A~~~~~~a 79 (115)
T 2kat_A 2 QAITERLEAMLAQGTDNMLLRFTLGKTYA-EHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQG-QGDRAGARQAWESG 79 (115)
T ss_dssp CCHHHHHHHHHTTTCCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCcHHHHHHHHHHHH-HccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHH-cCCHHHHHHHHHHH
Confidence 47899999999999999999999999997 89999999999999999999999999999999999 99999999999999
Q ss_pred HHhCCC
Q 023753 270 VKSAPD 275 (277)
Q Consensus 270 LeldPd 275 (277)
++++|.
T Consensus 80 l~~~~~ 85 (115)
T 2kat_A 80 LAAAQS 85 (115)
T ss_dssp HHHHHH
T ss_pred HHhccc
Confidence 998874
No 36
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.48 E-value=3.6e-13 Score=123.45 Aligned_cols=95 Identities=16% Similarity=0.091 Sum_probs=89.7
Q ss_pred HHHHHhCCCcHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Q 023753 180 NNYSNNNHGSSSTDAYYEKMIEANPGN---------------ALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNI 244 (277)
Q Consensus 180 ~~m~e~~Gd~deAi~~yekALeldP~n---------------~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~a 244 (277)
+..+...+++++|+.+|++|++++|++ ..+++++|.++. ..+++++|+.+|++|++++|+++.+
T Consensus 154 g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~-~~g~~~~A~~~~~~al~~~p~~~~a 232 (336)
T 1p5q_A 154 GTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHL-KLQAFSAAIESCNKALELDSNNEKG 232 (336)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCcHHH
Confidence 355666799999999999999999999 699999999997 8999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 023753 245 LSLYADLIWQAHKDASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 245 l~~LA~ll~~~~Gd~deAi~~yekALeldPdD 276 (277)
++++|.+|.. ++++++|+.+|++|++++|++
T Consensus 233 ~~~lg~~~~~-~g~~~~A~~~~~~al~l~P~~ 263 (336)
T 1p5q_A 233 LSRRGEAHLA-VNDFELARADFQKVLQLYPNN 263 (336)
T ss_dssp HHHHHHHHHH-TTCHHHHHHHHHHHHHHCSSC
T ss_pred HHHHHHHHHH-CCCHHHHHHHHHHHHHHCCCC
Confidence 9999999999 999999999999999999986
No 37
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.48 E-value=5.2e-13 Score=112.45 Aligned_cols=94 Identities=13% Similarity=0.084 Sum_probs=89.6
Q ss_pred HHHHhCCCcHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 023753 181 NYSNNNHGSSSTDAYYEKMIEANP-GNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDA 259 (277)
Q Consensus 181 ~m~e~~Gd~deAi~~yekALeldP-~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~ 259 (277)
..+...+++++|+.+|+++++++| .+..+++++|.++. ..+++++|+.+|++|++++|+++.++..+|.++.. ++++
T Consensus 15 ~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~~~~ 92 (228)
T 4i17_A 15 NDALNAKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCAD-NIKKYKEAADYFDIAIKKNYNLANAYIGKSAAYRD-MKNN 92 (228)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHHHH-TTCH
T ss_pred HHHHHccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHH-HhhcHHHHHHHHHHHHHhCcchHHHHHHHHHHHHH-cccH
Confidence 556678999999999999999999 99999999999997 89999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHHHhCCCC
Q 023753 260 SRAESYFDQAVKSAPDD 276 (277)
Q Consensus 260 deAi~~yekALeldPdD 276 (277)
++|+.+|+++++++|++
T Consensus 93 ~~A~~~~~~al~~~p~~ 109 (228)
T 4i17_A 93 QEYIATLTEGIKAVPGN 109 (228)
T ss_dssp HHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHHHHHCCCc
Confidence 99999999999999986
No 38
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.47 E-value=2.7e-13 Score=128.14 Aligned_cols=97 Identities=12% Similarity=0.068 Sum_probs=84.4
Q ss_pred hHHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc
Q 023753 178 SNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGD-FAKAEELCGRAILANPSDGNILSLYADLIWQAH 256 (277)
Q Consensus 178 yY~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd-~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~ 256 (277)
+++.++...+++++|+.+|++||+++|+++.+|+++|.++. ..++ +++|+.+|++||+++|+++.+|+++|.++.. .
T Consensus 102 ~lg~~~~~~g~~~~Al~~~~~al~l~P~~~~a~~~~g~~l~-~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~-~ 179 (382)
T 2h6f_A 102 YFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLK-SLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEW-L 179 (382)
T ss_dssp HHHHHHHHTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-H
T ss_pred HHHHHHHHCCChHHHHHHHHHHHHhCccCHHHHHHHHHHHH-HcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-c
Confidence 45566777788999999999999999999999999998886 6785 9999999999999999999999999998888 8
Q ss_pred CCHHHHHHHHHHHHHhCCCC
Q 023753 257 KDASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 257 Gd~deAi~~yekALeldPdD 276 (277)
|++++|+.+|++||+++|++
T Consensus 180 g~~~eAl~~~~kal~ldP~~ 199 (382)
T 2h6f_A 180 RDPSQELEFIADILNQDAKN 199 (382)
T ss_dssp TCCTTHHHHHHHHHHHCTTC
T ss_pred cCHHHHHHHHHHHHHhCccC
Confidence 99999999999999998876
No 39
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.45 E-value=2.3e-13 Score=128.54 Aligned_cols=95 Identities=14% Similarity=0.081 Sum_probs=89.0
Q ss_pred HHHHHhCCC-cHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCC
Q 023753 180 NNYSNNNHG-SSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKD 258 (277)
Q Consensus 180 ~~m~e~~Gd-~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd 258 (277)
+.++...++ +++|+.+|++||+++|+++.+|+++|.++. ..+++++|+.+|++||+++|+++.+|+++|.++.. .|+
T Consensus 138 g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~-~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~-~g~ 215 (382)
T 2h6f_A 138 RVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVE-WLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQE-FKL 215 (382)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTC
T ss_pred HHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHH-cCC
Confidence 355666785 999999999999999999999999999997 88999999999999999999999999999999999 999
Q ss_pred HHHHHHHHHHHHHhCCCC
Q 023753 259 ASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 259 ~deAi~~yekALeldPdD 276 (277)
+++|+.+|++||+++|++
T Consensus 216 ~~eAl~~~~~al~l~P~~ 233 (382)
T 2h6f_A 216 WDNELQYVDQLLKEDVRN 233 (382)
T ss_dssp CTTHHHHHHHHHHHCTTC
T ss_pred hHHHHHHHHHHHHhCCCC
Confidence 999999999999999986
No 40
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.45 E-value=1.3e-12 Score=110.82 Aligned_cols=96 Identities=10% Similarity=0.097 Sum_probs=90.7
Q ss_pred HHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCC
Q 023753 179 NNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKD 258 (277)
Q Consensus 179 Y~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd 258 (277)
....+...+++++|+.+|+++++++|+++.++.++|.++. ..+++++|+.+|++|++++|+++.++..+|.++.. .|+
T Consensus 49 l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~-~g~ 126 (275)
T 1xnf_A 49 RGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLT-QAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYY-GGR 126 (275)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHH-TTC
T ss_pred HHHHHHHcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH-HccCHHHHHHHHHHHHhcCccccHHHHHHHHHHHH-hcc
Confidence 3466667899999999999999999999999999999997 89999999999999999999999999999999999 999
Q ss_pred HHHHHHHHHHHHHhCCCC
Q 023753 259 ASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 259 ~deAi~~yekALeldPdD 276 (277)
+++|+.+|+++++++|++
T Consensus 127 ~~~A~~~~~~a~~~~~~~ 144 (275)
T 1xnf_A 127 DKLAQDDLLAFYQDDPND 144 (275)
T ss_dssp HHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHhCCCC
Confidence 999999999999999986
No 41
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.45 E-value=3e-14 Score=118.15 Aligned_cols=85 Identities=12% Similarity=0.064 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 023753 191 STDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQAV 270 (277)
Q Consensus 191 eAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~deAi~~yekAL 270 (277)
.+...|+++++++|+++.+++++|.+++ ..|++++|+.+|++|+.++|+++.+|+++|.++.. .|++++|+.+|++|+
T Consensus 20 ~~~~~l~~al~l~p~~~~~~~~lg~~~~-~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~-~g~~~~Ai~~~~~al 97 (151)
T 3gyz_A 20 NSGATLKDINAIPDDMMDDIYSYAYDFY-NKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQI-KEQFQQAADLYAVAF 97 (151)
T ss_dssp HTSCCTGGGCCSCHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred HCCCCHHHHhCCCHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-HccHHHHHHHHHHHH
Confidence 3445788899999999999999999997 89999999999999999999999999999999999 999999999999999
Q ss_pred HhCCCCC
Q 023753 271 KSAPDDW 277 (277)
Q Consensus 271 eldPdD~ 277 (277)
+++|+++
T Consensus 98 ~l~P~~~ 104 (151)
T 3gyz_A 98 ALGKNDY 104 (151)
T ss_dssp HHSSSCC
T ss_pred hhCCCCc
Confidence 9999974
No 42
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.45 E-value=1e-12 Score=108.72 Aligned_cols=96 Identities=9% Similarity=0.024 Sum_probs=87.8
Q ss_pred HHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH----------------
Q 023753 179 NNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDG---------------- 242 (277)
Q Consensus 179 Y~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~---------------- 242 (277)
....+...+++++|+.+|+++++++|+++.+++++|.++. ..+++++|+.+|++++++.|.+.
T Consensus 43 lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~ 121 (213)
T 1hh8_A 43 IGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYY-QTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFAC 121 (213)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHH-HcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccch
Confidence 3456667899999999999999999999999999999987 79999999999999999888877
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 023753 243 NILSLYADLIWQAHKDASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 243 ~al~~LA~ll~~~~Gd~deAi~~yekALeldPdD 276 (277)
.+++++|.++.. .|++++|+.+|+++++++|++
T Consensus 122 ~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~p~~ 154 (213)
T 1hh8_A 122 EVLYNIAFMYAK-KEEWKKAEEQLALATSMKSEP 154 (213)
T ss_dssp HHHHHHHHHHHH-TTCHHHHHHHHHHHHTTCCSG
T ss_pred HHHHHHHHHHHH-ccCHHHHHHHHHHHHHcCccc
Confidence 999999999999 999999999999999999964
No 43
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.44 E-value=6.5e-13 Score=111.83 Aligned_cols=95 Identities=13% Similarity=0.049 Sum_probs=89.2
Q ss_pred HHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH-------HHHHHHHHH
Q 023753 179 NNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDG-------NILSLYADL 251 (277)
Q Consensus 179 Y~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~-------~al~~LA~l 251 (277)
.+..+...+++++|+.+|+++++++|+++.++.++|.++. ..+++++|+.+|+++++++|+++ .++..+|.+
T Consensus 48 ~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~ 126 (228)
T 4i17_A 48 CGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAAYR-DMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQK 126 (228)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHHHHH-HcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHH
Confidence 3466667899999999999999999999999999999997 89999999999999999999999 669999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCC
Q 023753 252 IWQAHKDASRAESYFDQAVKSAPD 275 (277)
Q Consensus 252 l~~~~Gd~deAi~~yekALeldPd 275 (277)
+.. .+++++|+.+|++|++++|+
T Consensus 127 ~~~-~~~~~~A~~~~~~al~~~p~ 149 (228)
T 4i17_A 127 FQQ-AGNIEKAEENYKHATDVTSK 149 (228)
T ss_dssp HHH-TTCHHHHHHHHHHHTTSSCH
T ss_pred HHH-hccHHHHHHHHHHHHhcCCC
Confidence 999 99999999999999999997
No 44
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.44 E-value=4.2e-13 Score=119.69 Aligned_cols=95 Identities=17% Similarity=0.084 Sum_probs=90.1
Q ss_pred HHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 023753 180 NNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDA 259 (277)
Q Consensus 180 ~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~ 259 (277)
+..+...+++++|+.+|++|++++|+++.+++++|.++. ..+++++|+.+|++|++++|+++.+++++|.++.. .|++
T Consensus 11 g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~ 88 (281)
T 2c2l_A 11 GNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYL-KMQQPEQALADCRRALELDGQSVKAHFFLGQCQLE-MESY 88 (281)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHH-TTCH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCH
Confidence 356667899999999999999999999999999999997 89999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHHHhCCCC
Q 023753 260 SRAESYFDQAVKSAPDD 276 (277)
Q Consensus 260 deAi~~yekALeldPdD 276 (277)
++|+.+|++|++++|++
T Consensus 89 ~~A~~~~~~al~l~p~~ 105 (281)
T 2c2l_A 89 DEAIANLQRAYSLAKEQ 105 (281)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCccc
Confidence 99999999999999865
No 45
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.43 E-value=2.5e-12 Score=95.91 Aligned_cols=94 Identities=20% Similarity=0.308 Sum_probs=72.9
Q ss_pred HHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 023753 181 NYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDAS 260 (277)
Q Consensus 181 ~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~d 260 (277)
.++...+++++|+.+|+++++.+|.++.+++++|.++. ..+++++|+.+|++++..+|.++.++..+|.++.. .++++
T Consensus 43 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~~ 120 (136)
T 2fo7_A 43 NAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYY-KQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYK-QGDYD 120 (136)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT-TTCHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH-HccHH
Confidence 44445677888888888888888888877878887775 67788888888888888888888778888887777 78888
Q ss_pred HHHHHHHHHHHhCCCC
Q 023753 261 RAESYFDQAVKSAPDD 276 (277)
Q Consensus 261 eAi~~yekALeldPdD 276 (277)
+|+.+|+++++.+|++
T Consensus 121 ~A~~~~~~~~~~~~~~ 136 (136)
T 2fo7_A 121 EAIEYYQKALELDPRS 136 (136)
T ss_dssp HHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHHccCCCC
Confidence 8888888888877763
No 46
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.42 E-value=9.8e-13 Score=125.74 Aligned_cols=94 Identities=14% Similarity=0.117 Sum_probs=87.2
Q ss_pred HHHHhCCCcHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Q 023753 181 NYSNNNHGSSSTDAYYEKMIEANPGN---------------ALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNIL 245 (277)
Q Consensus 181 ~m~e~~Gd~deAi~~yekALeldP~n---------------~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al 245 (277)
..+...+++++|+.+|++|++++|.+ ..+++++|.++. ..+++++|+.+|++|++++|+++.++
T Consensus 276 ~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~-~~g~~~~A~~~~~~al~~~p~~~~a~ 354 (457)
T 1kt0_A 276 TVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYL-KLREYTKAVECCDKALGLDSANEKGL 354 (457)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHhcCCccHHHH
Confidence 55667899999999999999999999 799999999997 89999999999999999999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 023753 246 SLYADLIWQAHKDASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 246 ~~LA~ll~~~~Gd~deAi~~yekALeldPdD 276 (277)
+++|.+|+. ++++++|+.+|++|++++|++
T Consensus 355 ~~~g~a~~~-~g~~~~A~~~~~~al~l~P~~ 384 (457)
T 1kt0_A 355 YRRGEAQLL-MNEFESAKGDFEKVLEVNPQN 384 (457)
T ss_dssp HHHHHHHHH-TTCHHHHHHHHHHHHTTC---
T ss_pred HHHHHHHHH-ccCHHHHHHHHHHHHHhCCCC
Confidence 999999999 999999999999999999986
No 47
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.41 E-value=4.7e-12 Score=94.41 Aligned_cols=95 Identities=20% Similarity=0.306 Sum_probs=88.8
Q ss_pred HHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 023753 180 NNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDA 259 (277)
Q Consensus 180 ~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~ 259 (277)
...+...+++++|+.+|+++++.+|.++.+++.+|.++. ..+++++|+.+|++++..+|.++.++..+|.++.. .+++
T Consensus 8 ~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~ 85 (136)
T 2fo7_A 8 GNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYY-KQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYK-QGDY 85 (136)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT-TTCH
T ss_pred HHHHHHcCcHHHHHHHHHHHHHcCCcchhHHHHHHHHHH-HhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHH-hcCH
Confidence 355566799999999999999999999999999999887 78999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHHHhCCCC
Q 023753 260 SRAESYFDQAVKSAPDD 276 (277)
Q Consensus 260 deAi~~yekALeldPdD 276 (277)
++|+.+|+++++..|++
T Consensus 86 ~~A~~~~~~~~~~~~~~ 102 (136)
T 2fo7_A 86 DEAIEYYQKALELDPRS 102 (136)
T ss_dssp HHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHhCCCC
Confidence 99999999999999875
No 48
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.41 E-value=2.5e-12 Score=107.36 Aligned_cols=94 Identities=20% Similarity=0.110 Sum_probs=88.7
Q ss_pred hHHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC
Q 023753 178 SNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHK 257 (277)
Q Consensus 178 yY~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~G 257 (277)
....++...+++++|+.+|+++++++|.++.++.++|.++. ..+++++|+.+|+++++++|+++.++..+|.++.. .|
T Consensus 144 ~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~-~g 221 (258)
T 3uq3_A 144 LEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALA-KLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIA-VK 221 (258)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TT
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHhcCcccHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH-Hh
Confidence 34466777899999999999999999999999999999987 89999999999999999999999999999999999 99
Q ss_pred CHHHHHHHHHHHHHhC
Q 023753 258 DASRAESYFDQAVKSA 273 (277)
Q Consensus 258 d~deAi~~yekALeld 273 (277)
++++|+.+|+++++++
T Consensus 222 ~~~~A~~~~~~a~~~~ 237 (258)
T 3uq3_A 222 EYASALETLDAARTKD 237 (258)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhC
Confidence 9999999999999999
No 49
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.41 E-value=3.2e-12 Score=100.93 Aligned_cols=95 Identities=19% Similarity=0.043 Sum_probs=75.4
Q ss_pred HHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 023753 180 NNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDA 259 (277)
Q Consensus 180 ~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~ 259 (277)
..++...+++++|+.+|+++++.+|.++.++..+|.++. ..+++++|+.+|+++++.+|.++.++..+|.++.. .|++
T Consensus 83 a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~ 160 (186)
T 3as5_A 83 GLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALD-NLGRFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQ-MGRH 160 (186)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCH
T ss_pred HHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHH-HcCcHHHHHHHHHHHHhcCccchHHHHHHHHHHHH-cCCH
Confidence 345556678888888888888888888888888887776 67888888888888888888888888888888877 8888
Q ss_pred HHHHHHHHHHHHhCCCC
Q 023753 260 SRAESYFDQAVKSAPDD 276 (277)
Q Consensus 260 deAi~~yekALeldPdD 276 (277)
++|+.+|+++++++|++
T Consensus 161 ~~A~~~~~~~~~~~~~~ 177 (186)
T 3as5_A 161 EEALPHFKKANELDEGA 177 (186)
T ss_dssp HHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHcCCCc
Confidence 88888888888877765
No 50
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.41 E-value=2.9e-13 Score=109.96 Aligned_cols=84 Identities=8% Similarity=-0.064 Sum_probs=79.6
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 023753 192 TDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQAVK 271 (277)
Q Consensus 192 Ai~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~deAi~~yekALe 271 (277)
+...|+++++++|+++.+++++|.++. ..|++++|+.+|++|+.++|+++.+++.+|.++.. .|++++|+.+|++|++
T Consensus 6 ~~~~~~~al~~~p~~~~~~~~~g~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 83 (148)
T 2vgx_A 6 GGGTIAMLNEISSDTLEQLYSLAFNQY-QSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQA-MGQYDLAIHSYSYGAV 83 (148)
T ss_dssp CCCSHHHHTTCCHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred hhhhHHHHHcCCHhhHHHHHHHHHHHH-HcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHH-HhhHHHHHHHHHHHHh
Confidence 345799999999999999999999997 89999999999999999999999999999999999 9999999999999999
Q ss_pred hCCCCC
Q 023753 272 SAPDDW 277 (277)
Q Consensus 272 ldPdD~ 277 (277)
++|+++
T Consensus 84 l~p~~~ 89 (148)
T 2vgx_A 84 MDIXEP 89 (148)
T ss_dssp HSTTCT
T ss_pred cCCCCc
Confidence 999874
No 51
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.40 E-value=6.7e-12 Score=99.07 Aligned_cols=96 Identities=14% Similarity=0.025 Sum_probs=88.5
Q ss_pred HHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCC
Q 023753 179 NNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKD 258 (277)
Q Consensus 179 Y~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd 258 (277)
...++...+++++|+.+|+++++.+|.++.++.++|.++. ..+++++|+.+|++++..+|.++.++..+|.++.. .++
T Consensus 48 ~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~-~~~ 125 (186)
T 3as5_A 48 LGIAYVKTGAVDRGTELLERSLADAPDNVKVATVLGLTYV-QVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDN-LGR 125 (186)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTC
T ss_pred HHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH-HhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHH-cCc
Confidence 3456677899999999999999999999999999999887 78999999999999999999999999999999999 999
Q ss_pred HHHHHHHHHHHHHhCCCC
Q 023753 259 ASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 259 ~deAi~~yekALeldPdD 276 (277)
+++|+.+|+++++.+|++
T Consensus 126 ~~~A~~~~~~~~~~~~~~ 143 (186)
T 3as5_A 126 FDEAIDSFKIALGLRPNE 143 (186)
T ss_dssp HHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHhcCccc
Confidence 999999999999999875
No 52
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.38 E-value=1.7e-12 Score=121.48 Aligned_cols=94 Identities=20% Similarity=0.148 Sum_probs=89.3
Q ss_pred HHHHhCCCcHHHHHHHHHHHH----------------hCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Q 023753 181 NYSNNNHGSSSTDAYYEKMIE----------------ANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNI 244 (277)
Q Consensus 181 ~m~e~~Gd~deAi~~yekALe----------------ldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~a 244 (277)
..+...+++++|+.+|++|++ ++|.++.+++++|.++. ..+++++|+.+|++|++++|+++.+
T Consensus 231 ~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~-~~g~~~~A~~~~~~al~~~p~~~~a 309 (370)
T 1ihg_A 231 NTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKL-KMSDWQGAVDSCLEALEIDPSNTKA 309 (370)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHTTCTTCHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHH-hccCHHHHHHHHHHHHHhCchhHHH
Confidence 556678999999999999999 88889999999999997 8999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 023753 245 LSLYADLIWQAHKDASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 245 l~~LA~ll~~~~Gd~deAi~~yekALeldPdD 276 (277)
++.+|.+|.. ++++++|+.+|++|++++|++
T Consensus 310 ~~~lg~~~~~-~g~~~eA~~~l~~Al~l~P~~ 340 (370)
T 1ihg_A 310 LYRRAQGWQG-LKEYDQALADLKKAQEIAPED 340 (370)
T ss_dssp HHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHH-ccCHHHHHHHHHHHHHhCCCC
Confidence 9999999999 999999999999999999986
No 53
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.37 E-value=3e-12 Score=123.46 Aligned_cols=92 Identities=21% Similarity=0.119 Sum_probs=88.0
Q ss_pred HHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHH
Q 023753 183 SNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRA 262 (277)
Q Consensus 183 ~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~deA 262 (277)
+...+++++|+.+|++|++++|+++.+++++|.++. ..+++++|+++|++|++++|+++.+++++|.+|.. +|++++|
T Consensus 16 ~~~~g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~-~g~~~eA 93 (477)
T 1wao_1 16 YFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYL-RTECYGYALGDATRAIELDKKYIKGYYRRAASNMA-LGKFRAA 93 (477)
T ss_dssp TTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHH-HTCHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCHHHH
Confidence 345699999999999999999999999999999997 89999999999999999999999999999999999 9999999
Q ss_pred HHHHHHHHHhCCCC
Q 023753 263 ESYFDQAVKSAPDD 276 (277)
Q Consensus 263 i~~yekALeldPdD 276 (277)
+++|++|++++|++
T Consensus 94 ~~~~~~al~~~p~~ 107 (477)
T 1wao_1 94 LRDYETVVKVKPHD 107 (477)
T ss_dssp HHHHHHHHHHSTTC
T ss_pred HHHHHHHHHhCCCC
Confidence 99999999999986
No 54
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.37 E-value=3.2e-12 Score=114.19 Aligned_cols=95 Identities=13% Similarity=-0.046 Sum_probs=79.2
Q ss_pred HHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCC
Q 023753 179 NNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKD 258 (277)
Q Consensus 179 Y~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd 258 (277)
+..++...+++++|+.+|+++++++|+++.+|+++|.++. ..|++++|+.+|+++++++|+++.++.++|.++.. .|+
T Consensus 219 l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g~ 296 (365)
T 4eqf_A 219 LGVLFHLSGEFNRAIDAFNAALTVRPEDYSLWNRLGATLA-NGDRSEEAVEAYTRALEIQPGFIRSRYNLGISCIN-LGA 296 (365)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTC
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHH-CCC
Confidence 3455566688888888888888888888888888888886 78888888888888888888888888888888888 888
Q ss_pred HHHHHHHHHHHHHhCCC
Q 023753 259 ASRAESYFDQAVKSAPD 275 (277)
Q Consensus 259 ~deAi~~yekALeldPd 275 (277)
+++|+.+|++|++++|+
T Consensus 297 ~~~A~~~~~~al~~~~~ 313 (365)
T 4eqf_A 297 YREAVSNFLTALSLQRK 313 (365)
T ss_dssp CHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhCcc
Confidence 88888888888888776
No 55
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.37 E-value=6.2e-12 Score=104.61 Aligned_cols=96 Identities=13% Similarity=0.112 Sum_probs=73.5
Q ss_pred HHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCC
Q 023753 179 NNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKD 258 (277)
Q Consensus 179 Y~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd 258 (277)
+..++...+++++|+.+|+++++++|+++.++..+|.++. ..+++++|+.+|+++++.+|+++.++..+|.++.. .|+
T Consensus 131 ~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~ 208 (243)
T 2q7f_A 131 LGTVLVKLEQPKLALPYLQRAVELNENDTEARFQFGMCLA-NEGMLDEALSQFAAVTEQDPGHADAFYNAGVTYAY-KEN 208 (243)
T ss_dssp HHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTC
T ss_pred HHHHHHHhccHHHHHHHHHHHHHhCCccHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHH-ccC
Confidence 3455566677778888888888877777777777777775 67777888888888888878777777777777777 778
Q ss_pred HHHHHHHHHHHHHhCCCC
Q 023753 259 ASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 259 ~deAi~~yekALeldPdD 276 (277)
+++|+.+|+++++++|++
T Consensus 209 ~~~A~~~~~~~~~~~p~~ 226 (243)
T 2q7f_A 209 REKALEMLDKAIDIQPDH 226 (243)
T ss_dssp TTHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHccCcch
Confidence 888888888888777765
No 56
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.36 E-value=2.1e-12 Score=104.85 Aligned_cols=90 Identities=12% Similarity=0.219 Sum_probs=81.7
Q ss_pred hCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH-HHHHcCCH--HH
Q 023753 185 NNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADL-IWQAHKDA--SR 261 (277)
Q Consensus 185 ~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~l-l~~~~Gd~--de 261 (277)
..+++++|+.+|+++++.+|+++.+++.+|.++. ..+++++|+.+|++|++++|+++.++..+|.+ ++. .+++ ++
T Consensus 22 ~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~-~~~~~~~~ 99 (177)
T 2e2e_A 22 SQQNPEAQLQALQDKIRANPQNSEQWALLGEYYL-WQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQ-ASQHMTAQ 99 (177)
T ss_dssp -----CCCCHHHHHHHHHCCSCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHH-TTTCCCHH
T ss_pred hccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHh-cCCcchHH
Confidence 3578999999999999999999999999999997 89999999999999999999999999999999 667 8998 99
Q ss_pred HHHHHHHHHHhCCCC
Q 023753 262 AESYFDQAVKSAPDD 276 (277)
Q Consensus 262 Ai~~yekALeldPdD 276 (277)
|+.+|+++++++|++
T Consensus 100 A~~~~~~al~~~p~~ 114 (177)
T 2e2e_A 100 TRAMIDKALALDSNE 114 (177)
T ss_dssp HHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHhCCCc
Confidence 999999999999986
No 57
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.36 E-value=1.6e-11 Score=102.12 Aligned_cols=95 Identities=17% Similarity=0.289 Sum_probs=79.9
Q ss_pred HHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 023753 180 NNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDA 259 (277)
Q Consensus 180 ~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~ 259 (277)
...+...+++++|+.+|+++++++|.++.++..+|.++. ..+++++|+.+|+++++++|.++.++..+|.++.. .+++
T Consensus 64 a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~-~~~~ 141 (243)
T 2q7f_A 64 ANLLSSVNELERALAFYDKALELDSSAATAYYGAGNVYV-VKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVK-LEQP 141 (243)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHH-TSCH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHcCCcchHHHHHHHHHHH-HhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-hccH
Confidence 455666788888888888888888888888888888876 78888888888888888888888888888888888 8888
Q ss_pred HHHHHHHHHHHHhCCCC
Q 023753 260 SRAESYFDQAVKSAPDD 276 (277)
Q Consensus 260 deAi~~yekALeldPdD 276 (277)
++|+.+|+++++++|++
T Consensus 142 ~~A~~~~~~~~~~~~~~ 158 (243)
T 2q7f_A 142 KLALPYLQRAVELNEND 158 (243)
T ss_dssp HHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHhCCcc
Confidence 88888888888888865
No 58
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.36 E-value=1.9e-12 Score=102.60 Aligned_cols=77 Identities=18% Similarity=0.145 Sum_probs=71.9
Q ss_pred HHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 023753 198 KMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 198 kALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~deAi~~yekALeldPdD 276 (277)
++..+||+.+.++.++|..++ ..|+|++|+++|++||+++|+++.++.++|.+++. +|++++|+..|++||+++|++
T Consensus 4 r~a~inP~~a~~~~~~G~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~-~~~~~~A~~~~~~al~~~p~~ 80 (126)
T 4gco_A 4 RLAYINPELAQEEKNKGNEYF-KKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTK-LMEFQRALDDCDTCIRLDSKF 80 (126)
T ss_dssp ---CCCHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHCHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHh-hccHHHHHHHHHHHHHhhhhh
Confidence 455689999999999999998 89999999999999999999999999999999999 999999999999999999986
No 59
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.36 E-value=6.2e-12 Score=113.01 Aligned_cols=93 Identities=14% Similarity=0.146 Sum_probs=81.9
Q ss_pred HHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHH
Q 023753 182 YSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASR 261 (277)
Q Consensus 182 m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~de 261 (277)
++...+++++|+.+|+++++.+|+++.+++++|.++. ..|++++|+.+|++|++++|+++.++.+++.++.. .|++++
T Consensus 175 l~~~~~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~-~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~-~g~~~e 252 (291)
T 3mkr_A 175 LAAGGEKLQDAYYIFQEMADKCSPTLLLLNGQAACHM-AQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQH-LGKPPE 252 (291)
T ss_dssp HHHCTTHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCCHH
T ss_pred HHhCchHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCCHH
Confidence 3344578899999999999999999999999998886 89999999999999999999999999999999988 888865
Q ss_pred -HHHHHHHHHHhCCCC
Q 023753 262 -AESYFDQAVKSAPDD 276 (277)
Q Consensus 262 -Ai~~yekALeldPdD 276 (277)
|..+++++++++|++
T Consensus 253 aa~~~~~~~~~~~P~~ 268 (291)
T 3mkr_A 253 VTNRYLSQLKDAHRSH 268 (291)
T ss_dssp HHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHhCCCC
Confidence 578999999999986
No 60
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.35 E-value=1.5e-12 Score=119.63 Aligned_cols=94 Identities=19% Similarity=0.093 Sum_probs=83.3
Q ss_pred HHHHhCCCcHHHHHHHHHHHHhCCCCH-----------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q 023753 181 NYSNNNHGSSSTDAYYEKMIEANPGNA-----------------LLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGN 243 (277)
Q Consensus 181 ~m~e~~Gd~deAi~~yekALeldP~n~-----------------~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~ 243 (277)
..+...+++++|+.+|++|++++|++. .+++++|.++. ..+++++|+.+|++|++++|+++.
T Consensus 187 ~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~-~~g~~~~A~~~~~~al~~~p~~~~ 265 (338)
T 2if4_A 187 NSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLI-KLKRYDEAIGHCNIVLTEEEKNPK 265 (338)
T ss_dssp HHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHH-TTTCCHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHH
Confidence 344457999999999999999999987 38999999997 899999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 023753 244 ILSLYADLIWQAHKDASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 244 al~~LA~ll~~~~Gd~deAi~~yekALeldPdD 276 (277)
+++++|.+|.. ++++++|+.+|++|++++|++
T Consensus 266 a~~~lg~a~~~-~g~~~~A~~~l~~al~l~p~~ 297 (338)
T 2if4_A 266 ALFRRGKAKAE-LGQMDSARDDFRKAQKYAPDD 297 (338)
T ss_dssp HHHHHHHHHHT-TTCHHHHHHHHHHTTC-----
T ss_pred HHHHHHHHHHH-cCCHHHHHHHHHHHHHHCCCC
Confidence 99999999999 999999999999999999986
No 61
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.35 E-value=5.1e-12 Score=112.84 Aligned_cols=94 Identities=15% Similarity=0.033 Sum_probs=89.2
Q ss_pred HHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 023753 180 NNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDA 259 (277)
Q Consensus 180 ~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~ 259 (277)
...+...+++++|+.+|+++++++|+++.+++++|.++. ..|++++|+.+|++|++++|+++.++..+|.++.. .|++
T Consensus 72 ~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g~~ 149 (365)
T 4eqf_A 72 GLKRLKEGDLPVTILFMEAAILQDPGDAEAWQFLGITQA-ENENEQAAIVALQRCLELQPNNLKALMALAVSYTN-TSHQ 149 (365)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCH
T ss_pred HHHHHHCCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHH-HCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHc-cccH
Confidence 356666799999999999999999999999999999997 89999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHHHhCCC
Q 023753 260 SRAESYFDQAVKSAPD 275 (277)
Q Consensus 260 deAi~~yekALeldPd 275 (277)
++|+.+|+++++++|+
T Consensus 150 ~~A~~~~~~al~~~p~ 165 (365)
T 4eqf_A 150 QDACEALKNWIKQNPK 165 (365)
T ss_dssp HHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHHhCcc
Confidence 9999999999999886
No 62
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.35 E-value=8.2e-12 Score=110.51 Aligned_cols=96 Identities=13% Similarity=0.005 Sum_probs=78.0
Q ss_pred HHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCC
Q 023753 179 NNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKD 258 (277)
Q Consensus 179 Y~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd 258 (277)
...++...+++++|+.+|+++++++|+++.+++++|.++. ..|++++|+.+|+++++++|+++.++..+|.++.. .|+
T Consensus 223 l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~-~g~ 300 (368)
T 1fch_A 223 LGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLA-NGNQSEEAVAAYRRALELQPGYIRSRYNLGISCIN-LGA 300 (368)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTC
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-CCC
Confidence 3456666788888888888888888888888888888776 78888888888888888888888888888888888 888
Q ss_pred HHHHHHHHHHHHHhCCCC
Q 023753 259 ASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 259 ~deAi~~yekALeldPdD 276 (277)
+++|+.+|+++++++|++
T Consensus 301 ~~~A~~~~~~al~~~~~~ 318 (368)
T 1fch_A 301 HREAVEHFLEALNMQRKS 318 (368)
T ss_dssp HHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhCCCC
Confidence 888888888888887764
No 63
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.35 E-value=1.4e-12 Score=103.62 Aligned_cols=82 Identities=6% Similarity=-0.092 Sum_probs=75.4
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 023753 194 AYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQAVKSA 273 (277)
Q Consensus 194 ~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~deAi~~yekALeld 273 (277)
..|+++++++|++..+++.+|..+. ..|++++|+.+|++++.++|+++.+++.+|.++.. .+++++|+.+|++|++++
T Consensus 5 ~~l~~al~~~p~~~~~~~~~a~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~ 82 (142)
T 2xcb_A 5 GTLAMLRGLSEDTLEQLYALGFNQY-QAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQS-LGLYEQALQSYSYGALMD 82 (142)
T ss_dssp ----CCTTCCHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHC
T ss_pred hhHHHHHcCCHHHHHHHHHHHHHHH-HHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH-HhhHHHHHHHHHHHHhcC
Confidence 5788999999999999999999987 89999999999999999999999999999999999 999999999999999999
Q ss_pred CCCC
Q 023753 274 PDDW 277 (277)
Q Consensus 274 PdD~ 277 (277)
|+++
T Consensus 83 p~~~ 86 (142)
T 2xcb_A 83 INEP 86 (142)
T ss_dssp TTCT
T ss_pred CCCc
Confidence 9874
No 64
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.34 E-value=8.5e-12 Score=120.40 Aligned_cols=95 Identities=15% Similarity=0.162 Sum_probs=77.3
Q ss_pred HHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 023753 180 NNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDA 259 (277)
Q Consensus 180 ~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~ 259 (277)
..++...+++++|+.+|++|++++|+++.+++++|.++. ..|++++|+++|++|++++|+++.+++++|.++.. .|++
T Consensus 30 g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~-~g~~ 107 (568)
T 2vsy_A 30 ADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRW-TQQRHAEAAVLLQQASDAAPEHPGIALWLGHALED-AGQA 107 (568)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH-cCCH
Confidence 355556688888888888888888888888888888776 67888888888888888888888888888888887 8888
Q ss_pred HHHHHHHHHHHHhCCCC
Q 023753 260 SRAESYFDQAVKSAPDD 276 (277)
Q Consensus 260 deAi~~yekALeldPdD 276 (277)
++|+++|+++++++|++
T Consensus 108 ~~A~~~~~~al~~~p~~ 124 (568)
T 2vsy_A 108 EAAAAAYTRAHQLLPEE 124 (568)
T ss_dssp HHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHhCCCC
Confidence 88888888888888865
No 65
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.33 E-value=4.1e-12 Score=121.60 Aligned_cols=96 Identities=10% Similarity=-0.123 Sum_probs=89.9
Q ss_pred HHHHHHhC---------CCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc--------CCHHHHHHHHHHHHHhCC--
Q 023753 179 NNNYSNNN---------HGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVR--------GDFAKAEELCGRAILANP-- 239 (277)
Q Consensus 179 Y~~m~e~~---------Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~--------Gd~eeA~e~~ekALeldP-- 239 (277)
+..++... +++++|+.+|++|++++|+++.+|+++|.+|. .. +++++|+.+|++|++++|
T Consensus 176 lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~~~~~~~~~g~~~~A~~~~~~al~~~p~~ 254 (474)
T 4abn_A 176 LSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYL-SLYFNTGQNPKISQQALSAYAQAEKVDRKA 254 (474)
T ss_dssp HHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHHHHTTCCHHHHHHHHHHHHHHHHHCGGG
T ss_pred HHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HHHHhhccccchHHHHHHHHHHHHHhCCCc
Confidence 34556666 89999999999999999999999999999987 67 899999999999999999
Q ss_pred -CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 023753 240 -SDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 240 -~n~~al~~LA~ll~~~~Gd~deAi~~yekALeldPdD 276 (277)
+++.+++++|.+|+. .|++++|+.+|++|++++|++
T Consensus 255 ~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~l~p~~ 291 (474)
T 4abn_A 255 SSNPDLHLNRATLHKY-EESYGEALEGFSQAAALDPAW 291 (474)
T ss_dssp GGCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTC
T ss_pred ccCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCCCC
Confidence 999999999999999 999999999999999999986
No 66
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.33 E-value=1.9e-11 Score=108.12 Aligned_cols=96 Identities=9% Similarity=0.007 Sum_probs=91.1
Q ss_pred HHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCC
Q 023753 179 NNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKD 258 (277)
Q Consensus 179 Y~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd 258 (277)
....+...+++++|+.+|+++++++|+++.+++++|.++. ..|++++|+.+|+++++++|+++.++..+|.++.. .|+
T Consensus 70 ~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~-~g~ 147 (368)
T 1fch_A 70 EGLRRLQEGDLPNAVLLFEAAVQQDPKHMEAWQYLGTTQA-ENEQELLAISALRRCLELKPDNQTALMALAVSFTN-ESL 147 (368)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTC
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HCcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH-cCC
Confidence 3466777899999999999999999999999999999997 89999999999999999999999999999999999 999
Q ss_pred HHHHHHHHHHHHHhCCCC
Q 023753 259 ASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 259 ~deAi~~yekALeldPdD 276 (277)
+++|+.+|+++++++|++
T Consensus 148 ~~~A~~~~~~~~~~~~~~ 165 (368)
T 1fch_A 148 QRQACEILRDWLRYTPAY 165 (368)
T ss_dssp HHHHHHHHHHHHHTSTTT
T ss_pred HHHHHHHHHHHHHhCcCc
Confidence 999999999999999975
No 67
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.33 E-value=1.3e-11 Score=101.99 Aligned_cols=91 Identities=11% Similarity=0.077 Sum_probs=84.4
Q ss_pred HHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 023753 181 NYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDAS 260 (277)
Q Consensus 181 ~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~d 260 (277)
..+...+++++|+.+|++++ +| ++.+++++|.++. ..+++++|+.+|++|+.++|+++.+++++|.++.. .++++
T Consensus 14 ~~~~~~~~~~~A~~~~~~a~--~~-~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~-~~~~~ 88 (213)
T 1hh8_A 14 VLAADKKDWKGALDAFSAVQ--DP-HSRICFNIGCMYT-ILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQ-TEKYD 88 (213)
T ss_dssp HHHHHTTCHHHHHHHHHTSS--SC-CHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHH
T ss_pred HHHHHhCCHHHHHHHHHHHc--CC-ChHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHH-cccHH
Confidence 55567899999999999996 44 7899999999997 89999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHHhCCCC
Q 023753 261 RAESYFDQAVKSAPDD 276 (277)
Q Consensus 261 eAi~~yekALeldPdD 276 (277)
+|+.+|++++++.|++
T Consensus 89 ~A~~~~~~al~~~~~~ 104 (213)
T 1hh8_A 89 LAIKDLKEALIQLRGN 104 (213)
T ss_dssp HHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHhCCCc
Confidence 9999999999999875
No 68
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.33 E-value=1.4e-11 Score=102.86 Aligned_cols=96 Identities=19% Similarity=0.135 Sum_probs=87.9
Q ss_pred HHHHHHhCCCcHHHHHHHHHHHH--------------------------hCCCCHHHHHHHHHHHHHHcCCHHHHHHHHH
Q 023753 179 NNNYSNNNHGSSSTDAYYEKMIE--------------------------ANPGNALLLGNYARFLKEVRGDFAKAEELCG 232 (277)
Q Consensus 179 Y~~m~e~~Gd~deAi~~yekALe--------------------------ldP~n~~al~nLA~lL~e~~Gd~eeA~e~~e 232 (277)
...++...+++++|+.+|+++++ .+|.++.++.++|.++. ..+++++|+.+|+
T Consensus 85 l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~A~~~~~ 163 (258)
T 3uq3_A 85 IGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYF-TKSDWPNAVKAYT 163 (258)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH-HTTCHHHHHHHHH
T ss_pred HHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHH-HhcCHHHHHHHHH
Confidence 33566677899999999999988 77778899999999987 8999999999999
Q ss_pred HHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 023753 233 RAILANPSDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 233 kALeldP~n~~al~~LA~ll~~~~Gd~deAi~~yekALeldPdD 276 (277)
++++++|.++.++..+|.++.. .+++++|+.+|+++++++|++
T Consensus 164 ~a~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~al~~~~~~ 206 (258)
T 3uq3_A 164 EMIKRAPEDARGYSNRAAALAK-LMSFPEAIADCNKAIEKDPNF 206 (258)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHhcCcccHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHhCHHH
Confidence 9999999999999999999999 999999999999999999985
No 69
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.32 E-value=2.4e-11 Score=109.58 Aligned_cols=94 Identities=20% Similarity=0.235 Sum_probs=65.3
Q ss_pred HHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 023753 181 NYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDAS 260 (277)
Q Consensus 181 ~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~d 260 (277)
.++...+++++|+..|+++++++|+++.++.++|.++. ..|++++|+.+|+++++++|+++.++..+|.++.. .|+++
T Consensus 211 ~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g~~~ 288 (388)
T 1w3b_A 211 NVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYY-EQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKE-KGSVA 288 (388)
T ss_dssp HHHHTTTCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHH-HSCHH
T ss_pred HHHHHcCCHHHHHHHHHHHHhhCcCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH-cCCHH
Confidence 44445566677777777777777777777777776665 56777777777777777777777777777777766 67777
Q ss_pred HHHHHHHHHHHhCCCC
Q 023753 261 RAESYFDQAVKSAPDD 276 (277)
Q Consensus 261 eAi~~yekALeldPdD 276 (277)
+|+.+|+++++++|++
T Consensus 289 ~A~~~~~~al~~~p~~ 304 (388)
T 1w3b_A 289 EAEDCYNTALRLCPTH 304 (388)
T ss_dssp HHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHhhCccc
Confidence 7777777777776654
No 70
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.31 E-value=9.5e-12 Score=105.79 Aligned_cols=97 Identities=13% Similarity=0.220 Sum_probs=87.5
Q ss_pred hHHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC
Q 023753 178 SNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHK 257 (277)
Q Consensus 178 yY~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~G 257 (277)
....++...+++++|+.+|+++++++|+++.++.++|.++. ..+++++|+.+|+++++++|+++.++..+|..++. .+
T Consensus 79 ~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~-~~ 156 (272)
T 3u4t_A 79 YYGKILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFY-NKGNFPLAIQYMEKQIRPTTTDPKVFYELGQAYYY-NK 156 (272)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHH-HTTCHHHHHHHHGGGCCSSCCCHHHHHHHHHHHHH-TT
T ss_pred HHHHHHHHcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHH-HccCHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHH-HH
Confidence 44567778899999999999999999999999999999987 89999999999999999999999999999944445 57
Q ss_pred CHHHHHHHHHHHHHhCCCC
Q 023753 258 DASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 258 d~deAi~~yekALeldPdD 276 (277)
++++|+.+|+++++++|++
T Consensus 157 ~~~~A~~~~~~a~~~~p~~ 175 (272)
T 3u4t_A 157 EYVKADSSFVKVLELKPNI 175 (272)
T ss_dssp CHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHHHHHHhCccc
Confidence 9999999999999999985
No 71
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.31 E-value=1.5e-11 Score=109.63 Aligned_cols=94 Identities=12% Similarity=0.003 Sum_probs=84.5
Q ss_pred HHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHH--------------------------------
Q 023753 181 NYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAE-------------------------------- 228 (277)
Q Consensus 181 ~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~-------------------------------- 228 (277)
..+...|++++|+..|+++++++|+++.+++++|.++. ..|++++|+
T Consensus 125 ~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~-~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l~~~~~~~~ 203 (287)
T 3qou_A 125 MQLMQESNYTDALPLLXDAWQLSNQNGEIGLLLAETLI-ALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIELLXQAADTP 203 (287)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHH-HTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHHHHHHTSCH
T ss_pred HHHHhCCCHHHHHHHHHHHHHhCCcchhHHHHHHHHHH-HCCCHHHHHHHHHhCchhhcchHHHHHHHHHHHHhhcccCc
Confidence 44556799999999999999999999999999999886 788888765
Q ss_pred --HHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 023753 229 --ELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 229 --e~~ekALeldP~n~~al~~LA~ll~~~~Gd~deAi~~yekALeldPdD 276 (277)
+.|++|++++|+++.+++++|.++.. .|++++|+..|+++++.+|++
T Consensus 204 a~~~l~~al~~~P~~~~~~~~la~~l~~-~g~~~~A~~~l~~~l~~~p~~ 252 (287)
T 3qou_A 204 EIQQLQQQVAENPEDAALATQLALQLHQ-VGRNEEALELLFGHLRXDLTA 252 (287)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTG
T ss_pred cHHHHHHHHhcCCccHHHHHHHHHHHHH-cccHHHHHHHHHHHHhccccc
Confidence 44566688899999999999999999 999999999999999999975
No 72
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.31 E-value=8.2e-12 Score=119.50 Aligned_cols=95 Identities=13% Similarity=0.065 Sum_probs=89.4
Q ss_pred HHHHHHhCCCc-HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc-
Q 023753 179 NNNYSNNNHGS-SSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAH- 256 (277)
Q Consensus 179 Y~~m~e~~Gd~-deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~- 256 (277)
.+.++...+++ ++|+.+|++|++++|+++.+|+++|.+|. ..|++++|+++|++|++++|+ +.++.++|.++.. .
T Consensus 108 lg~~~~~~g~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~-~~~~~~lg~~~~~-~~ 184 (474)
T 4abn_A 108 KGKALNVTPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYW-KKGDVTSAHTCFSGALTHCKN-KVSLQNLSMVLRQ-LQ 184 (474)
T ss_dssp HHHHHTSSSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHTTCCC-HHHHHHHHHHHTT-CC
T ss_pred HHHHHHhccccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhhCCC-HHHHHHHHHHHHH-hc
Confidence 33666677999 99999999999999999999999999997 899999999999999999999 7999999999998 9
Q ss_pred --------CCHHHHHHHHHHHHHhCCCC
Q 023753 257 --------KDASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 257 --------Gd~deAi~~yekALeldPdD 276 (277)
+++++|+.+|++|++++|++
T Consensus 185 ~~~~~~~~g~~~~A~~~~~~al~~~p~~ 212 (474)
T 4abn_A 185 TDSGDEHSRHVMDSVRQAKLAVQMDVLD 212 (474)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred cCChhhhhhhHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999986
No 73
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.30 E-value=2.8e-11 Score=105.31 Aligned_cols=93 Identities=14% Similarity=0.097 Sum_probs=88.8
Q ss_pred HHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 023753 180 NNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDA 259 (277)
Q Consensus 180 ~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~ 259 (277)
...+...|++++|+.+|+++++.+|+++.+++++|.++. ..+++++|+.+|+++++++|+++.++..+|.++.. .|++
T Consensus 10 ~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~ 87 (359)
T 3ieg_A 10 GKKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFL-AMGKSKAALPDLTKVIALKMDFTAARLQRGHLLLK-QGKL 87 (359)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCH
T ss_pred HHHHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHH-HccCHHHHHHHHHHHHHhCCCcchHHHHHHHHHHH-cCCh
Confidence 356667899999999999999999999999999999997 89999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHHHhCC
Q 023753 260 SRAESYFDQAVKSAP 274 (277)
Q Consensus 260 deAi~~yekALeldP 274 (277)
++|+.+|+++++++|
T Consensus 88 ~~A~~~~~~~~~~~~ 102 (359)
T 3ieg_A 88 DEAEDDFKKVLKSNP 102 (359)
T ss_dssp HHHHHHHHHHHTSCC
T ss_pred HHHHHHHHHHHhcCC
Confidence 999999999999998
No 74
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.30 E-value=3.3e-11 Score=103.99 Aligned_cols=95 Identities=17% Similarity=0.079 Sum_probs=86.7
Q ss_pred HHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCC
Q 023753 179 NNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKD 258 (277)
Q Consensus 179 Y~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd 258 (277)
...++...+++++|+.+|+++++.+|+++.++.++|.++. ..+++++|+.+|+++++++|+++.++..+|.++.. .|+
T Consensus 178 la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~-~g~ 255 (327)
T 3cv0_A 178 LGVLYNLSNNYDSAAANLRRAVELRPDDAQLWNKLGATLA-NGNRPQEALDAYNRALDINPGYVRVMYNMAVSYSN-MSQ 255 (327)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTC
T ss_pred HHHHHHHhccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH-hcc
Confidence 3456667899999999999999999999999999999887 78999999999999999999999999999999998 999
Q ss_pred HHHHHHHHHHHHHhCCC
Q 023753 259 ASRAESYFDQAVKSAPD 275 (277)
Q Consensus 259 ~deAi~~yekALeldPd 275 (277)
+++|+.+|+++++++|+
T Consensus 256 ~~~A~~~~~~a~~~~~~ 272 (327)
T 3cv0_A 256 YDLAAKQLVRAIYMQVG 272 (327)
T ss_dssp HHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhCCc
Confidence 99999999999999887
No 75
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.30 E-value=3.3e-11 Score=98.45 Aligned_cols=87 Identities=16% Similarity=0.179 Sum_probs=35.5
Q ss_pred CCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHH--hCCCCHHHHHHHHHHHHHHcCCHHHH
Q 023753 186 NHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVR-GDFAKAEELCGRAIL--ANPSDGNILSLYADLIWQAHKDASRA 262 (277)
Q Consensus 186 ~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~-Gd~eeA~e~~ekALe--ldP~n~~al~~LA~ll~~~~Gd~deA 262 (277)
.+++++|+.+|+++++++|+++.++.++|.++. .. +++++|+.+|+++++ .+|.+..++..+|.++.. .|++++|
T Consensus 55 ~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~-~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~A 132 (225)
T 2vq2_A 55 LKVNDKAQESFRQALSIKPDSAEINNNYGWFLC-GRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAK-QGQFGLA 132 (225)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-TTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHH-TTCHHHH
T ss_pred cCChHHHHHHHHHHHHhCCCChHHHHHHHHHHH-HhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHH-cCCHHHH
Confidence 344444444444444444444444444444333 33 444444444444444 233333344444444443 4444444
Q ss_pred HHHHHHHHHhCC
Q 023753 263 ESYFDQAVKSAP 274 (277)
Q Consensus 263 i~~yekALeldP 274 (277)
+.+|+++++.+|
T Consensus 133 ~~~~~~~~~~~~ 144 (225)
T 2vq2_A 133 EAYLKRSLAAQP 144 (225)
T ss_dssp HHHHHHHHHHST
T ss_pred HHHHHHHHHhCC
Confidence 444444444433
No 76
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.30 E-value=8.9e-12 Score=94.31 Aligned_cols=72 Identities=13% Similarity=0.100 Sum_probs=65.6
Q ss_pred hCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 023753 202 ANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPD 275 (277)
Q Consensus 202 ldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~deAi~~yekALeldPd 275 (277)
.+|+++.+++++|.++. ..|++++|+.+|++|++++|+++.+++++|.++.. .|++++|+.+|++++++.|.
T Consensus 2 ~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~-~g~~~~A~~~~~~al~l~~~ 73 (100)
T 3ma5_A 2 EDPEDPFTRYALAQEHL-KHDNASRALALFEELVETDPDYVGTYYHLGKLYER-LDRTDDAIDTYAQGIEVARE 73 (100)
T ss_dssp ---CCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred CCccCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-cCCHHHHHHHHHHHHhhhhc
Confidence 48999999999999997 89999999999999999999999999999999999 99999999999999988764
No 77
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.29 E-value=3.1e-11 Score=101.73 Aligned_cols=95 Identities=19% Similarity=0.276 Sum_probs=68.8
Q ss_pred HHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH--hCCCCHHHHHHHHHHHHHHcC
Q 023753 180 NNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAIL--ANPSDGNILSLYADLIWQAHK 257 (277)
Q Consensus 180 ~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALe--ldP~n~~al~~LA~ll~~~~G 257 (277)
..++...+++++|+.+|+++++++|.++.++.++|.++. ..+++++|+.+|++++. .+|.++.++..+|.++.. .|
T Consensus 78 a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g 155 (252)
T 2ho1_A 78 AVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGGFLY-EQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQ-MK 155 (252)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHH-TT
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHH-HHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHH-cC
Confidence 355556677777777777777777777777777777665 67777777777777777 667777777777777777 77
Q ss_pred CHHHHHHHHHHHHHhCCCC
Q 023753 258 DASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 258 d~deAi~~yekALeldPdD 276 (277)
++++|+.+|+++++.+|++
T Consensus 156 ~~~~A~~~~~~~~~~~~~~ 174 (252)
T 2ho1_A 156 KPAQAKEYFEKSLRLNRNQ 174 (252)
T ss_dssp CHHHHHHHHHHHHHHCSCC
T ss_pred CHHHHHHHHHHHHhcCccc
Confidence 7777777777777777654
No 78
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.29 E-value=3.9e-11 Score=98.03 Aligned_cols=90 Identities=19% Similarity=0.205 Sum_probs=85.8
Q ss_pred HHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc-CC
Q 023753 180 NNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAH-KD 258 (277)
Q Consensus 180 ~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~-Gd 258 (277)
...+...+++++|+.+|+++++++|+++.++..+|.++. ..+++++|+.+|++++.++|+++.++..+|.++.. . ++
T Consensus 15 ~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~-~~~~ 92 (225)
T 2vq2_A 15 AMEYMRGQDYRQATASIEDALKSDPKNELAWLVRAEIYQ-YLKVNDKAQESFRQALSIKPDSAEINNNYGWFLCG-RLNR 92 (225)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT-TTCC
T ss_pred HHHHHHHhhHHHHHHHHHHHHHhCccchHHHHHHHHHHH-HcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHHH-hcCc
Confidence 456667899999999999999999999999999999987 89999999999999999999999999999999999 9 99
Q ss_pred HHHHHHHHHHHHH
Q 023753 259 ASRAESYFDQAVK 271 (277)
Q Consensus 259 ~deAi~~yekALe 271 (277)
+++|+.+|+++++
T Consensus 93 ~~~A~~~~~~~~~ 105 (225)
T 2vq2_A 93 PAESMAYFDKALA 105 (225)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHc
Confidence 9999999999999
No 79
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.29 E-value=4.2e-11 Score=104.15 Aligned_cols=95 Identities=14% Similarity=0.157 Sum_probs=87.6
Q ss_pred HHHHHhCCCcHHHHHHHHHHHHhCCCCHH----HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 023753 180 NNYSNNNHGSSSTDAYYEKMIEANPGNAL----LLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQA 255 (277)
Q Consensus 180 ~~m~e~~Gd~deAi~~yekALeldP~n~~----al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~ 255 (277)
...+...+++++|+.+|+++++.+|+++. ++..+|.++. ..+++++|+.+|+++++++|+++.++..+|.++..
T Consensus 241 a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~- 318 (359)
T 3ieg_A 241 AEELIRDGRYTDATSKYESVMKTEPSVAEYTVRSKERICHCFS-KDEKPVEAIRICSEVLQMEPDNVNALKDRAEAYLI- 318 (359)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-
T ss_pred HHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHH-HccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHH-
Confidence 34467789999999999999999999984 4667898887 89999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHHhCCCC
Q 023753 256 HKDASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 256 ~Gd~deAi~~yekALeldPdD 276 (277)
.|++++|+.+|+++++++|++
T Consensus 319 ~g~~~~A~~~~~~a~~~~p~~ 339 (359)
T 3ieg_A 319 EEMYDEAIQDYEAAQEHNEND 339 (359)
T ss_dssp TTCHHHHHHHHHHHHTTCTTC
T ss_pred cCCHHHHHHHHHHHHhcCCCC
Confidence 999999999999999999986
No 80
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.29 E-value=5.2e-11 Score=100.35 Aligned_cols=96 Identities=18% Similarity=0.126 Sum_probs=84.7
Q ss_pred HHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCC
Q 023753 179 NNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKD 258 (277)
Q Consensus 179 Y~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd 258 (277)
+..++...+++++|+.+|+++++.+|.++.++..+|.++. ..+++++|+.+|+++++.+|+++.++..++.++.. .++
T Consensus 147 la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~ 224 (252)
T 2ho1_A 147 LGLVSLQMKKPAQAKEYFEKSLRLNRNQPSVALEMADLLY-KEREYVPARQYYDLFAQGGGQNARSLLLGIRLAKV-FED 224 (252)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHH-TTC
T ss_pred HHHHHHHcCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHH-ccC
Confidence 3456667789999999999999999999999999998886 78999999999999999999999999999998888 899
Q ss_pred HHHHHHHHHHHHHhCCCC
Q 023753 259 ASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 259 ~deAi~~yekALeldPdD 276 (277)
+++|+.+|+++++++|++
T Consensus 225 ~~~A~~~~~~~~~~~p~~ 242 (252)
T 2ho1_A 225 RDTAASYGLQLKRLYPGS 242 (252)
T ss_dssp HHHHHHHHHHHHHHCTTS
T ss_pred HHHHHHHHHHHHHHCCCC
Confidence 999999999999998876
No 81
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.29 E-value=2.6e-11 Score=109.35 Aligned_cols=95 Identities=20% Similarity=0.206 Sum_probs=79.5
Q ss_pred HHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 023753 180 NNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDA 259 (277)
Q Consensus 180 ~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~ 259 (277)
..++...+++++|+.+|+++++++|+++.++.++|.++. ..|++++|+.+|+++++++|+++.++..+|.++.. .|++
T Consensus 244 ~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g~~ 321 (388)
T 1w3b_A 244 ACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALK-EKGSVAEAEDCYNTALRLCPTHADSLNNLANIKRE-QGNI 321 (388)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHH-HHSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT-TTCH
T ss_pred HHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHH-cCCH
Confidence 355666788888888888888888888888888888876 78888888888888888888888888888888887 8888
Q ss_pred HHHHHHHHHHHHhCCCC
Q 023753 260 SRAESYFDQAVKSAPDD 276 (277)
Q Consensus 260 deAi~~yekALeldPdD 276 (277)
++|+.+|+++++++|++
T Consensus 322 ~~A~~~~~~al~~~p~~ 338 (388)
T 1w3b_A 322 EEAVRLYRKALEVFPEF 338 (388)
T ss_dssp HHHHHHHHHHTTSCTTC
T ss_pred HHHHHHHHHHHhcCCCc
Confidence 88888888888888865
No 82
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.28 E-value=5.3e-11 Score=100.74 Aligned_cols=94 Identities=14% Similarity=0.014 Sum_probs=69.8
Q ss_pred hHHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC
Q 023753 178 SNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHK 257 (277)
Q Consensus 178 yY~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~G 257 (277)
....++...+++++|+.+|+++++++|+++.++.++|.++. ..|++++|+.+|+++++++|+++.++..++.+ .. .+
T Consensus 82 ~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~-~~-~~ 158 (275)
T 1xnf_A 82 YLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALY-YGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLA-EQ-KL 158 (275)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH-HH-HH
T ss_pred HHHHHHHHccCHHHHHHHHHHHHhcCccccHHHHHHHHHHH-HhccHHHHHHHHHHHHHhCCCChHHHHHHHHH-HH-hc
Confidence 34467777899999999999999999999999999999997 89999999999999999999986433332222 22 24
Q ss_pred CHHHHHHHHHHHHHhCC
Q 023753 258 DASRAESYFDQAVKSAP 274 (277)
Q Consensus 258 d~deAi~~yekALeldP 274 (277)
++++|+.+|++++...|
T Consensus 159 ~~~~A~~~~~~~~~~~~ 175 (275)
T 1xnf_A 159 DEKQAKEVLKQHFEKSD 175 (275)
T ss_dssp CHHHHHHHHHHHHHHSC
T ss_pred CHHHHHHHHHHHHhcCC
Confidence 44444444444444333
No 83
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.28 E-value=6.5e-11 Score=102.19 Aligned_cols=95 Identities=13% Similarity=-0.012 Sum_probs=89.9
Q ss_pred HHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 023753 180 NNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDA 259 (277)
Q Consensus 180 ~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~ 259 (277)
...+...+++++|+.+|+++++.+|+++.++..+|.++. ..+++++|+.+|+++++++|+++.++..+|.++.. .+++
T Consensus 28 a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~-~~~~ 105 (327)
T 3cv0_A 28 GLSMLKLANLAEAALAFEAVCQAAPEREEAWRSLGLTQA-ENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTN-EHNA 105 (327)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCH
T ss_pred HHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHH-cCCH
Confidence 355667899999999999999999999999999999987 89999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHHHhCCCC
Q 023753 260 SRAESYFDQAVKSAPDD 276 (277)
Q Consensus 260 deAi~~yekALeldPdD 276 (277)
++|+.+|+++++.+|++
T Consensus 106 ~~A~~~~~~~~~~~~~~ 122 (327)
T 3cv0_A 106 NAALASLRAWLLSQPQY 122 (327)
T ss_dssp HHHHHHHHHHHHTSTTT
T ss_pred HHHHHHHHHHHHhCCcc
Confidence 99999999999999975
No 84
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.28 E-value=1.3e-12 Score=96.90 Aligned_cols=88 Identities=15% Similarity=0.122 Sum_probs=79.3
Q ss_pred HHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHH
Q 023753 180 NNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSD------GNILSLYADLIW 253 (277)
Q Consensus 180 ~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n------~~al~~LA~ll~ 253 (277)
+..+...+++++|+.+|+++++++|+++.+++++|.++. ..+++++|+.+|++|++++|++ ..+++.+|.++.
T Consensus 11 g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~ 89 (111)
T 2l6j_A 11 GNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALI-KLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQYRLELAQG 89 (111)
T ss_dssp HHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHH
Confidence 355667899999999999999999999999999999997 8999999999999999999999 889999999998
Q ss_pred HHcCCHHHHHHHHHHH
Q 023753 254 QAHKDASRAESYFDQA 269 (277)
Q Consensus 254 ~~~Gd~deAi~~yekA 269 (277)
. .+++++|+..|++.
T Consensus 90 ~-~~~~~~a~~~~~~~ 104 (111)
T 2l6j_A 90 A-VGSVQIPVVEVDEL 104 (111)
T ss_dssp H-HHCCCCCSSSSSSC
T ss_pred H-HHhHhhhHhHHHHh
Confidence 8 88888887766553
No 85
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.27 E-value=4.7e-11 Score=115.23 Aligned_cols=97 Identities=11% Similarity=0.037 Sum_probs=91.9
Q ss_pred hHHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc-
Q 023753 178 SNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAH- 256 (277)
Q Consensus 178 yY~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~- 256 (277)
.+..++...+++++|+.+|+++++++|+++.+++++|.++. ..|++++|+++|++|++++|+++.++.++|.++.. .
T Consensus 62 ~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~~ 139 (568)
T 2vsy_A 62 RLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWLGHALE-DAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRR-LC 139 (568)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TT
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-hh
Confidence 34567778899999999999999999999999999999997 89999999999999999999999999999999999 9
Q ss_pred --CCHHHHHHHHHHHHHhCCCC
Q 023753 257 --KDASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 257 --Gd~deAi~~yekALeldPdD 276 (277)
+++++|+++|+++++.+|++
T Consensus 140 ~~g~~~~A~~~~~~al~~~p~~ 161 (568)
T 2vsy_A 140 DWRALDVLSAQVRAAVAQGVGA 161 (568)
T ss_dssp CCTTHHHHHHHHHHHHHHTCCC
T ss_pred ccccHHHHHHHHHHHHhcCCcc
Confidence 99999999999999999985
No 86
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.27 E-value=4.4e-11 Score=109.00 Aligned_cols=95 Identities=14% Similarity=0.105 Sum_probs=90.1
Q ss_pred HHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 023753 180 NNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDA 259 (277)
Q Consensus 180 ~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~ 259 (277)
...+...+++++|+.+|+++++.+|+++.+++.+|.++. ..+++++|+.+|+++++++|+++.++..+|.++.. .|++
T Consensus 33 ~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g~~ 110 (450)
T 2y4t_A 33 GKKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFL-AMGKSKAALPDLTKVIQLKMDFTAARLQRGHLLLK-QGKL 110 (450)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCH
T ss_pred HHHHHHCCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHH-HCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH-cCCH
Confidence 356677899999999999999999999999999999997 89999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHHHhCCCC
Q 023753 260 SRAESYFDQAVKSAPDD 276 (277)
Q Consensus 260 deAi~~yekALeldPdD 276 (277)
++|+.+|+++++++|++
T Consensus 111 ~~A~~~~~~~~~~~~~~ 127 (450)
T 2y4t_A 111 DEAEDDFKKVLKSNPSE 127 (450)
T ss_dssp HHHHHHHHHHHTSCCCH
T ss_pred HHHHHHHHHHHhcCCCC
Confidence 99999999999999974
No 87
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.27 E-value=2e-11 Score=103.73 Aligned_cols=93 Identities=10% Similarity=0.106 Sum_probs=52.7
Q ss_pred HHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC----HHHHHHHHHHHHHHc
Q 023753 181 NYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSD----GNILSLYADLIWQAH 256 (277)
Q Consensus 181 ~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n----~~al~~LA~ll~~~~ 256 (277)
..+...+++++|+.+|+++++++|+++.+++.+|.++. ..+++++|+.+|++++. .|.+ +.++..+|.++.. .
T Consensus 11 ~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~-~~~~~~~~~~~~~~lg~~~~~-~ 87 (272)
T 3u4t_A 11 DFLFKNNNYAEAIEVFNKLEAKKYNSPYIYNRRAVCYY-ELAKYDLAQKDIETYFS-KVNATKAKSADFEYYGKILMK-K 87 (272)
T ss_dssp HHHHTTTCHHHHHHHHHHHHHTTCCCSTTHHHHHHHHH-HTTCHHHHHHHHHHHHT-TSCTTTCCHHHHHHHHHHHHH-T
T ss_pred HHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH-HHhhHHHHHHHHHHHHh-ccCchhHHHHHHHHHHHHHHH-c
Confidence 34444556666666666666666666656666665554 55666666666666665 3322 2235555665555 5
Q ss_pred CCHHHHHHHHHHHHHhCCCC
Q 023753 257 KDASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 257 Gd~deAi~~yekALeldPdD 276 (277)
+++++|+.+|+++++++|++
T Consensus 88 ~~~~~A~~~~~~a~~~~~~~ 107 (272)
T 3u4t_A 88 GQDSLAIQQYQAAVDRDTTR 107 (272)
T ss_dssp TCHHHHHHHHHHHHHHSTTC
T ss_pred ccHHHHHHHHHHHHhcCccc
Confidence 66666666666666665554
No 88
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.26 E-value=4.1e-11 Score=103.55 Aligned_cols=94 Identities=11% Similarity=0.047 Sum_probs=62.2
Q ss_pred HHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 023753 181 NYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRG-DFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDA 259 (277)
Q Consensus 181 ~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~G-d~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~ 259 (277)
..+...+++++|+.+|+++++.+|+++.+++.+|.++. ..+ ++++|+.+|+++++++|+++.++..+|.++.. .+++
T Consensus 64 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~-~~~~ 141 (330)
T 3hym_B 64 GTLVELNKANELFYLSHKLVDLYPSNPVSWFAVGCYYL-MVGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAV-ESEH 141 (330)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHHHHHHHH-HSCSCHHHHHHHHHHHHTTCTTCTHHHHHHHHHHHH-HTCH
T ss_pred HHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHH-HhhhhHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH-ccCH
Confidence 44444566666666666666666666666666666665 556 66666666666666666666666666666666 6666
Q ss_pred HHHHHHHHHHHHhCCCC
Q 023753 260 SRAESYFDQAVKSAPDD 276 (277)
Q Consensus 260 deAi~~yekALeldPdD 276 (277)
++|+.+|++++++.|++
T Consensus 142 ~~A~~~~~~a~~~~~~~ 158 (330)
T 3hym_B 142 DQAMAAYFTAAQLMKGC 158 (330)
T ss_dssp HHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHhcccc
Confidence 66666666666666653
No 89
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.26 E-value=4.9e-11 Score=103.06 Aligned_cols=93 Identities=14% Similarity=0.167 Sum_probs=46.5
Q ss_pred HHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC---------CCCHHHHHHHHHH
Q 023753 181 NYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILAN---------PSDGNILSLYADL 251 (277)
Q Consensus 181 ~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeld---------P~n~~al~~LA~l 251 (277)
.++...+++++|+.+|+++++++|+++.++.++|.++. ..+++++|+.+|++++.+. |.++.++..+|.+
T Consensus 167 ~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~ 245 (330)
T 3hym_B 167 LEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAF-QNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHV 245 (330)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHH
T ss_pred HHHHHHhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHH-HcccHHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHH
Confidence 33344455555555555555555555555555555443 4455555555555555543 3444445555555
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCC
Q 023753 252 IWQAHKDASRAESYFDQAVKSAPD 275 (277)
Q Consensus 252 l~~~~Gd~deAi~~yekALeldPd 275 (277)
+.. .|++++|+.+|+++++++|+
T Consensus 246 ~~~-~g~~~~A~~~~~~a~~~~~~ 268 (330)
T 3hym_B 246 CRK-LKKYAEALDYHRQALVLIPQ 268 (330)
T ss_dssp HHH-TTCHHHHHHHHHHHHHHSTT
T ss_pred HHH-hcCHHHHHHHHHHHHhhCcc
Confidence 544 55555555555555555444
No 90
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.26 E-value=8.3e-12 Score=92.20 Aligned_cols=86 Identities=14% Similarity=0.113 Sum_probs=76.8
Q ss_pred HHHHhCCCcHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 023753 181 NYSNNNHGSSSTDAYYEKMIEANPGNAL-LLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDA 259 (277)
Q Consensus 181 ~m~e~~Gd~deAi~~yekALeldP~n~~-al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~ 259 (277)
..+...+++++|+.+|+++++++|+++. +++++|.++. ..+++++|+.+|++|++++|+++.++.+ +.+
T Consensus 8 ~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~---------~~~ 77 (99)
T 2kc7_A 8 KELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYR-KLGDWQKALNNYQSAIELNPDSPALQAR---------KMV 77 (99)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCTTSTHHHHH---------HHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhcCCCcHHHHHH---------HHH
Confidence 3455679999999999999999999999 9999999997 8999999999999999999999987743 347
Q ss_pred HHHHHHHHHHHHhCCCC
Q 023753 260 SRAESYFDQAVKSAPDD 276 (277)
Q Consensus 260 deAi~~yekALeldPdD 276 (277)
.+|+.+|++++..+|++
T Consensus 78 ~~a~~~~~~~~~~~p~~ 94 (99)
T 2kc7_A 78 MDILNFYNKDMYNQLEH 94 (99)
T ss_dssp HHHHHHHCCTTHHHHCC
T ss_pred HHHHHHHHHHhccCccc
Confidence 88999999999998876
No 91
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.25 E-value=9.8e-12 Score=124.61 Aligned_cols=93 Identities=9% Similarity=-0.030 Sum_probs=86.0
Q ss_pred HHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 023753 181 NYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDAS 260 (277)
Q Consensus 181 ~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~d 260 (277)
.++...|++++|+..|+++++++|+++.+|+++|.++. ..|++++|+++|++|++++|+++.+++++|.++.. +|+++
T Consensus 441 ~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~-~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~-~g~~~ 518 (681)
T 2pzi_A 441 RALLDLGDVAKATRKLDDLAERVGWRWRLVWYRAVAEL-LTGDYDSATKHFTEVLDTFPGELAPKLALAATAEL-AGNTD 518 (681)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHH-HTCCC
T ss_pred HHHHhcCCHHHHHHHHHHHhccCcchHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH-cCChH
Confidence 45566799999999999999999999999999999887 78999999999999999999999999999999998 99999
Q ss_pred HHHHHHHHHHHhCCCC
Q 023753 261 RAESYFDQAVKSAPDD 276 (277)
Q Consensus 261 eAi~~yekALeldPdD 276 (277)
+ +.+|++|++++|++
T Consensus 519 ~-~~~~~~al~~~P~~ 533 (681)
T 2pzi_A 519 E-HKFYQTVWSTNDGV 533 (681)
T ss_dssp T-TCHHHHHHHHCTTC
T ss_pred H-HHHHHHHHHhCCch
Confidence 9 99999999999986
No 92
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.24 E-value=9.5e-11 Score=92.06 Aligned_cols=92 Identities=14% Similarity=-0.020 Sum_probs=82.3
Q ss_pred HHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH--HHHHc
Q 023753 179 NNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADL--IWQAH 256 (277)
Q Consensus 179 Y~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~l--l~~~~ 256 (277)
+..++...+++++|+.+|+++++++|+++.+++++|.++. ..+++++|+.+|+++++++|++..++..++.+ +.. .
T Consensus 53 ~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~-~ 130 (166)
T 1a17_A 53 RSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNM-ALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVK-Q 130 (166)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHH-H
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHH-HhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH-H
Confidence 3456677899999999999999999999999999999987 89999999999999999999999988665555 777 8
Q ss_pred CCHHHHHHHHHHHHHh
Q 023753 257 KDASRAESYFDQAVKS 272 (277)
Q Consensus 257 Gd~deAi~~yekALel 272 (277)
+++++|+.+++++..+
T Consensus 131 ~~~~~A~~~~~~~~~~ 146 (166)
T 1a17_A 131 KAFERAIAGDEHKRSV 146 (166)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcccchHHH
Confidence 9999999999998765
No 93
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.24 E-value=4.9e-11 Score=102.78 Aligned_cols=93 Identities=17% Similarity=0.030 Sum_probs=55.6
Q ss_pred HHHHhCCCcHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHH--------cCCHHHHHHHHHHHHHhCCCCHHHH----
Q 023753 181 NYSNNNHGSSSTDAYYEKMIEANPGN---ALLLGNYARFLKEV--------RGDFAKAEELCGRAILANPSDGNIL---- 245 (277)
Q Consensus 181 ~m~e~~Gd~deAi~~yekALeldP~n---~~al~nLA~lL~e~--------~Gd~eeA~e~~ekALeldP~n~~al---- 245 (277)
..+...+++++|+.+|+++++++|++ +.+++.+|.++. . .+++++|+.+|+++++.+|+++.+.
T Consensus 60 ~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~-~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~ 138 (261)
T 3qky_A 60 RAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYY-KLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQ 138 (261)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHH-HHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHH
T ss_pred HHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHH-HhcccccccchhHHHHHHHHHHHHHHCcCchhHHHHHH
Confidence 44445566666666666666665543 445666666554 4 5666666666666666666654444
Q ss_pred -------------HHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 023753 246 -------------SLYADLIWQAHKDASRAESYFDQAVKSAPD 275 (277)
Q Consensus 246 -------------~~LA~ll~~~~Gd~deAi~~yekALeldPd 275 (277)
+.+|.+++. .|++++|+.+|+++++..|+
T Consensus 139 ~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~l~~~p~ 180 (261)
T 3qky_A 139 KIRELRAKLARKQYEAARLYER-RELYEAAAVTYEAVFDAYPD 180 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHHCCC
Confidence 555666666 66666666666666666665
No 94
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.22 E-value=1.3e-10 Score=106.96 Aligned_cols=93 Identities=16% Similarity=0.110 Sum_probs=87.8
Q ss_pred HHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 023753 181 NYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDAS 260 (277)
Q Consensus 181 ~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~d 260 (277)
..+...|++++|+.+|+++++.+| ++.++.++|.++. ..|++++|+.+|+++++++|+++.++..+|.++.. .|+++
T Consensus 14 ~~~~~~g~~~~A~~~~~~al~~~p-~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g~~~ 90 (514)
T 2gw1_A 14 NQFFRNKKYDDAIKYYNWALELKE-DPVFYSNLSACYV-SVGDLKKVVEMSTKALELKPDYSKVLLRRASANEG-LGKFA 90 (514)
T ss_dssp HHHHHTSCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHH-TTCHH
T ss_pred HHHHHhccHHHHHHHHHHHHhcCc-cHHHHHhHHHHHH-HHhhHHHHHHHHHHHhccChHHHHHHHHHHHHHHH-HhhHH
Confidence 566678999999999999999999 6999999999997 89999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHHhCCCC
Q 023753 261 RAESYFDQAVKSAPDD 276 (277)
Q Consensus 261 eAi~~yekALeldPdD 276 (277)
+|+.+|++++.++|.+
T Consensus 91 ~A~~~~~~~~~~~~~~ 106 (514)
T 2gw1_A 91 DAMFDLSVLSLNGDFN 106 (514)
T ss_dssp HHHHHHHHHHHSSSCC
T ss_pred HHHHHHHHHHhcCCCc
Confidence 9999999999999854
No 95
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.22 E-value=8.4e-11 Score=101.30 Aligned_cols=95 Identities=15% Similarity=0.045 Sum_probs=85.8
Q ss_pred HHHHhCCCcHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHH
Q 023753 181 NYSNNNHGSSSTDAYYEKMIEANPGN---ALLLGNYARFLKEVRGDFAKAEELCGRAILANPSD---GNILSLYADLIWQ 254 (277)
Q Consensus 181 ~m~e~~Gd~deAi~~yekALeldP~n---~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n---~~al~~LA~ll~~ 254 (277)
..+...+++++|+.+|+++++.+|++ +.+++.+|.+++ ..+++++|+.+|+++++++|++ +.+++.+|.+++.
T Consensus 23 ~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~-~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~ 101 (261)
T 3qky_A 23 MEFYNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYY-QNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYK 101 (261)
T ss_dssp HHHHHTTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHH
Confidence 45556799999999999999999999 899999999997 8999999999999999998854 6789999998864
Q ss_pred H-------cCCHHHHHHHHHHHHHhCCCC
Q 023753 255 A-------HKDASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 255 ~-------~Gd~deAi~~yekALeldPdD 276 (277)
. .+++++|+.+|+++++.+|++
T Consensus 102 ~~~~~~~~~~~~~~A~~~~~~~l~~~p~~ 130 (261)
T 3qky_A 102 LSPPYELDQTDTRKAIEAFQLFIDRYPNH 130 (261)
T ss_dssp HCCCTTSCCHHHHHHHHHHHHHHHHCTTC
T ss_pred hcccccccchhHHHHHHHHHHHHHHCcCc
Confidence 2 689999999999999999986
No 96
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.21 E-value=1.7e-10 Score=82.63 Aligned_cols=74 Identities=20% Similarity=0.258 Sum_probs=63.5
Q ss_pred HHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 023753 180 NNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQ 254 (277)
Q Consensus 180 ~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~ 254 (277)
...+...+++++|+.+|+++++++|+++.+++++|.++. ..+++++|+.+|+++++++|+++.++.++|.++..
T Consensus 16 a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~ 89 (91)
T 1na3_A 16 GNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYY-KQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQK 89 (91)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH-HHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHh
Confidence 355666788999999999999999999988999998886 78899999999999999999999988888888765
No 97
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.21 E-value=7.2e-11 Score=109.75 Aligned_cols=94 Identities=18% Similarity=0.166 Sum_probs=83.3
Q ss_pred HHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 023753 180 NNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDA 259 (277)
Q Consensus 180 ~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~ 259 (277)
+..+...+++++|+.+|+++++++|+++.+++++|.++. ..|++++|+.+|+++++++|+++.++..+|.++.. .|++
T Consensus 32 g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~-~g~~ 109 (537)
T 3fp2_A 32 GNHFFTAKNFNEAIKYYQYAIELDPNEPVFYSNISACYI-STGDLEKVIEFTTKALEIKPDHSKALLRRASANES-LGNF 109 (537)
T ss_dssp HHHHHHTTCCC-CHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCH
T ss_pred HHHHHHhccHHHHHHHHHHHHhhCCCCcHHHHHHHHHHH-HcCCHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH-cCCH
Confidence 356667899999999999999999999999999999997 89999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHHHhCCCC
Q 023753 260 SRAESYFDQAVKSAPDD 276 (277)
Q Consensus 260 deAi~~yekALeldPdD 276 (277)
++|+.+|+ ++.++|+.
T Consensus 110 ~~A~~~~~-~~~~~~~~ 125 (537)
T 3fp2_A 110 TDAMFDLS-VLSLNGDF 125 (537)
T ss_dssp HHHHHHHH-HHC-----
T ss_pred HHHHHHHH-HHhcCCCC
Confidence 99999995 88887764
No 98
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.21 E-value=1.1e-10 Score=106.28 Aligned_cols=95 Identities=14% Similarity=0.153 Sum_probs=88.5
Q ss_pred HHHHHhCCCcHHHHHHHHHHHHhCCCCHH----HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 023753 180 NNYSNNNHGSSSTDAYYEKMIEANPGNAL----LLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQA 255 (277)
Q Consensus 180 ~~m~e~~Gd~deAi~~yekALeldP~n~~----al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~ 255 (277)
..++...+++++|+.+|+++++++|+++. ++.++|.++. ..|++++|+.+|+++++++|+++.++..+|.++..
T Consensus 264 ~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~- 341 (450)
T 2y4t_A 264 AEELIRDGRYTDATSKYESVMKTEPSIAEYTVRSKERICHCFS-KDEKPVEAIRVCSEVLQMEPDNVNALKDRAEAYLI- 341 (450)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-
T ss_pred HHHHHHcCCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHH-
Confidence 45666779999999999999999999954 7889999887 89999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHHhCCCC
Q 023753 256 HKDASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 256 ~Gd~deAi~~yekALeldPdD 276 (277)
.|++++|+.+|+++++++|++
T Consensus 342 ~~~~~~A~~~~~~al~~~p~~ 362 (450)
T 2y4t_A 342 EEMYDEAIQDYETAQEHNEND 362 (450)
T ss_dssp TTCHHHHHHHHHHHHTTSSSC
T ss_pred hcCHHHHHHHHHHHHHhCcch
Confidence 999999999999999999986
No 99
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.21 E-value=7.4e-11 Score=118.23 Aligned_cols=92 Identities=15% Similarity=-0.052 Sum_probs=87.0
Q ss_pred HhCCCcHHHHHHHHHHH--------HhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 023753 184 NNNHGSSSTDAYYEKMI--------EANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQA 255 (277)
Q Consensus 184 e~~Gd~deAi~~yekAL--------eldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~ 255 (277)
...+++++|++.|++++ +.+|+++.+++++|.++. ..|++++|+++|++|++++|+++.+++++|.++..
T Consensus 402 ~~~~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~-~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~- 479 (681)
T 2pzi_A 402 TVLSQPVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALL-DLGDVAKATRKLDDLAERVGWRWRLVWYRAVAELL- 479 (681)
T ss_dssp TTTCCHHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-
T ss_pred ccccCHHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHH-hcCCHHHHHHHHHHHhccCcchHHHHHHHHHHHHH-
Confidence 55689999999999999 999999999999999997 79999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHHhCCCCC
Q 023753 256 HKDASRAESYFDQAVKSAPDDW 277 (277)
Q Consensus 256 ~Gd~deAi~~yekALeldPdD~ 277 (277)
.|++++|+.+|++|++++|++.
T Consensus 480 ~g~~~~A~~~~~~al~l~P~~~ 501 (681)
T 2pzi_A 480 TGDYDSATKHFTEVLDTFPGEL 501 (681)
T ss_dssp HTCHHHHHHHHHHHHHHSTTCS
T ss_pred cCCHHHHHHHHHHHHHhCCCCh
Confidence 9999999999999999999873
No 100
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.20 E-value=3.8e-11 Score=98.39 Aligned_cols=90 Identities=11% Similarity=-0.037 Sum_probs=55.9
Q ss_pred HhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHH----------------------------------HHH
Q 023753 184 NNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAK----------------------------------AEE 229 (277)
Q Consensus 184 e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~ee----------------------------------A~e 229 (277)
...|++++|+..|+++++++|+++.+++++|.++. ..|++++ |+.
T Consensus 17 ~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~-~~g~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~a~~ 95 (176)
T 2r5s_A 17 LQQGEHAQALNVIQTLSDELQSRGDVKLAKADCLL-ETKQFELAQELLATIPLEYQDNSYKSLIAKLELHQQAAESPELK 95 (176)
T ss_dssp HHTTCHHHHHHHHHTSCHHHHTSHHHHHHHHHHHH-HTTCHHHHHHHHTTCCGGGCCHHHHHHHHHHHHHHHHTSCHHHH
T ss_pred HHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHH-HCCCHHHHHHHHHHhhhccCChHHHHHHHHHHHHhhcccchHHH
Confidence 33455555555555555555555555555555443 3444433 344
Q ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 023753 230 LCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPD 275 (277)
Q Consensus 230 ~~ekALeldP~n~~al~~LA~ll~~~~Gd~deAi~~yekALeldPd 275 (277)
+|+++++++|+++.+++.+|.++.. .|++++|+.+|+++++++|+
T Consensus 96 ~~~~al~~~P~~~~~~~~la~~~~~-~g~~~~A~~~~~~~l~~~p~ 140 (176)
T 2r5s_A 96 RLEQELAANPDNFELACELAVQYNQ-VGRDEEALELLWNILKVNLG 140 (176)
T ss_dssp HHHHHHHHSTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTTCTT
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHH-cccHHHHHHHHHHHHHhCcc
Confidence 5555666677777777777777777 77777777777777777775
No 101
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.20 E-value=2.3e-11 Score=96.03 Aligned_cols=70 Identities=19% Similarity=0.235 Sum_probs=65.4
Q ss_pred CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 023753 205 GNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 205 ~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~deAi~~yekALeldPdD 276 (277)
+.+.++.++|..++ ..|+|++|+.+|++||+++|+++.++.++|.+|+. ++++++|+.+|++||+++|++
T Consensus 6 d~A~a~~~lG~~~~-~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~-~~~~~~A~~~~~~al~~~~~~ 75 (127)
T 4gcn_A 6 DAAIAEKDLGNAAY-KQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFE-EKKFAECVQFCEKAVEVGRET 75 (127)
T ss_dssp HHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHH-hhhHHHHHHHHHHHHHhCccc
Confidence 34677889999998 89999999999999999999999999999999999 999999999999999998864
No 102
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.18 E-value=1.9e-10 Score=106.90 Aligned_cols=94 Identities=16% Similarity=0.211 Sum_probs=74.1
Q ss_pred HHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 023753 181 NYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDAS 260 (277)
Q Consensus 181 ~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~d 260 (277)
.++...+++++|+.+|+++++++|+++.++..+|.++. ..+++++|+.+|+++++++|+++.++..+|.++.. .|+++
T Consensus 284 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~-~g~~~ 361 (537)
T 3fp2_A 284 LTLADKENSQEFFKFFQKAVDLNPEYPPTYYHRGQMYF-ILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYK-QGKFT 361 (537)
T ss_dssp HHTCCSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHH-TTCHH
T ss_pred HHHHHhcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCHH
Confidence 44445677888888888888888888888888887776 67888888888888888888888888888888877 78888
Q ss_pred HHHHHHHHHHHhCCCC
Q 023753 261 RAESYFDQAVKSAPDD 276 (277)
Q Consensus 261 eAi~~yekALeldPdD 276 (277)
+|+.+|+++++++|++
T Consensus 362 ~A~~~~~~~~~~~~~~ 377 (537)
T 3fp2_A 362 ESEAFFNETKLKFPTL 377 (537)
T ss_dssp HHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHhCCCC
Confidence 8888888888887765
No 103
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.18 E-value=1e-10 Score=104.20 Aligned_cols=85 Identities=19% Similarity=0.270 Sum_probs=75.6
Q ss_pred HHHHHHHHHHHH-hCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHHHcCCHHHHHHHHH
Q 023753 190 SSTDAYYEKMIE-ANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGN-ILSLYADLIWQAHKDASRAESYFD 267 (277)
Q Consensus 190 deAi~~yekALe-ldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~-al~~LA~ll~~~~Gd~deAi~~ye 267 (277)
++|+..|++|++ ++|++..+|.++|.++. ..+++++|+.+|++|++++|.++. +|..++.++.. .+++++|+.+|+
T Consensus 81 ~~A~~~~~rAl~~~~p~~~~~~~~~~~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~-~~~~~~A~~~~~ 158 (308)
T 2ond_A 81 DEAANIYERAISTLLKKNMLLYFAYADYEE-SRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARR-AEGIKSGRMIFK 158 (308)
T ss_dssp HHHHHHHHHHHTTTTTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHH-HHCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccHHHHHHHHHHHH-hcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHH-hcCHHHHHHHHH
Confidence 889999999999 79999999999998886 789999999999999999998886 89999988888 889999999999
Q ss_pred HHHHhCCCC
Q 023753 268 QAVKSAPDD 276 (277)
Q Consensus 268 kALeldPdD 276 (277)
+|++.+|.+
T Consensus 159 ~a~~~~p~~ 167 (308)
T 2ond_A 159 KAREDARTR 167 (308)
T ss_dssp HHHTSTTCC
T ss_pred HHHhcCCCC
Confidence 999888865
No 104
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.18 E-value=2.6e-10 Score=102.38 Aligned_cols=96 Identities=10% Similarity=-0.052 Sum_probs=84.3
Q ss_pred HHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHH--HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc
Q 023753 179 NNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYA--RFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAH 256 (277)
Q Consensus 179 Y~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA--~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~ 256 (277)
...++...|++++|+..|+++++++|++..+....+ .++. ..+++++|+.+|+++++.+|+++.+++++|.++.. .
T Consensus 136 l~~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~l~~a~~~l~~-~~~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~~-~ 213 (291)
T 3mkr_A 136 TVQILLKLDRLDLARKELKKMQDQDEDATLTQLATAWVSLAA-GGEKLQDAYYIFQEMADKCSPTLLLLNGQAACHMA-Q 213 (291)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH-CTTHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHH-T
T ss_pred HHHHHHHCCCHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-c
Confidence 346777889999999999999999999875544433 3332 35899999999999999999999999999999999 9
Q ss_pred CCHHHHHHHHHHHHHhCCCC
Q 023753 257 KDASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 257 Gd~deAi~~yekALeldPdD 276 (277)
|++++|+.+|++|++++|++
T Consensus 214 g~~~eA~~~l~~al~~~p~~ 233 (291)
T 3mkr_A 214 GRWEAAEGVLQEALDKDSGH 233 (291)
T ss_dssp TCHHHHHHHHHHHHHHCTTC
T ss_pred CCHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999987
No 105
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.17 E-value=1.8e-10 Score=105.50 Aligned_cols=91 Identities=11% Similarity=0.025 Sum_probs=82.7
Q ss_pred HHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 023753 180 NNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDA 259 (277)
Q Consensus 180 ~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~ 259 (277)
...+...+++++|+.+|++||+++|+++.+++++|.+|. ..+++++|+.+|++|++++|+++.++..++.++.. .+++
T Consensus 203 a~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~-~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~-~~~~ 280 (336)
T 1p5q_A 203 AMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHL-AVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQR-IRRQ 280 (336)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHH-HHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-HHHH
Confidence 355666789999999999999999999999999999997 89999999999999999999999999999999998 9999
Q ss_pred HHH-HHHHHHHHHh
Q 023753 260 SRA-ESYFDQAVKS 272 (277)
Q Consensus 260 deA-i~~yekALel 272 (277)
++| ...|++++..
T Consensus 281 ~~a~~~~~~~~~~~ 294 (336)
T 1p5q_A 281 LAREKKLYANMFER 294 (336)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 998 5677777654
No 106
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.17 E-value=2.7e-10 Score=107.82 Aligned_cols=96 Identities=13% Similarity=0.123 Sum_probs=89.2
Q ss_pred HHHHHHhCCCcHHHHHHHHHHHHh------CCCC-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 023753 179 NNNYSNNNHGSSSTDAYYEKMIEA------NPGN-ALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADL 251 (277)
Q Consensus 179 Y~~m~e~~Gd~deAi~~yekALel------dP~n-~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~l 251 (277)
...++...|++++|+.+|++++++ +|++ ..+|..++.++. ..|++++|+++|+++++++|+++.++..++.+
T Consensus 481 l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~ 559 (597)
T 2xpi_A 481 LGVVAFNKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYR-KLKMYDAAIDALNQGLLLSTNDANVHTAIALV 559 (597)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSSCCHHHHHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCCCChHHHHHHHHH
Confidence 446667789999999999999999 7765 789999999997 89999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCC
Q 023753 252 IWQAHKDASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 252 l~~~~Gd~deAi~~yekALeldPdD 276 (277)
|.. .|++++|+.+|+++++++|++
T Consensus 560 ~~~-~g~~~~A~~~~~~~l~~~p~~ 583 (597)
T 2xpi_A 560 YLH-KKIPGLAITHLHESLAISPNE 583 (597)
T ss_dssp HHH-TTCHHHHHHHHHHHHHHCTTC
T ss_pred HHH-hCCHHHHHHHHHHHHhcCCCC
Confidence 999 999999999999999999986
No 107
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.17 E-value=1.8e-10 Score=82.50 Aligned_cols=70 Identities=19% Similarity=0.316 Sum_probs=66.3
Q ss_pred CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 023753 205 GNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 205 ~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~deAi~~yekALeldPdD 276 (277)
.++.+++++|.++. ..+++++|+.+|++|++++|+++.++..+|.++.. .+++++|+.+|+++++++|++
T Consensus 7 ~~~~~~~~la~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~~p~~ 76 (91)
T 1na3_A 7 NSAEAWYNLGNAYY-KQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYK-QGDYDEAIEYYQKALELDPNN 76 (91)
T ss_dssp HHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTC
T ss_pred ccHHHHHHHHHHHH-HccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH-HhhHHHHHHHHHHHHhcCCCC
Confidence 46788999999887 89999999999999999999999999999999999 999999999999999999986
No 108
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.16 E-value=1.5e-10 Score=98.69 Aligned_cols=95 Identities=16% Similarity=0.096 Sum_probs=84.3
Q ss_pred HHHHhCCCcHHHHHHHHHHHHhCCCCH---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH---HHHHHHHHHHH
Q 023753 181 NYSNNNHGSSSTDAYYEKMIEANPGNA---LLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGN---ILSLYADLIWQ 254 (277)
Q Consensus 181 ~m~e~~Gd~deAi~~yekALeldP~n~---~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~---al~~LA~ll~~ 254 (277)
..+...|++++|+..|+++++.+|+++ .+++++|.+++ ..+++++|+.+|+++++.+|+++. +++.+|.++..
T Consensus 12 ~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~-~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~~~~ 90 (225)
T 2yhc_A 12 QQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYY-KNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMA 90 (225)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHh
Confidence 445567999999999999999999874 78999999997 899999999999999999999864 78889988875
Q ss_pred H-----------------cCCHHHHHHHHHHHHHhCCCC
Q 023753 255 A-----------------HKDASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 255 ~-----------------~Gd~deAi~~yekALeldPdD 276 (277)
. .+++++|+..|+++++.+|++
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~ 129 (225)
T 2yhc_A 91 LDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNS 129 (225)
T ss_dssp HHC--------------CCHHHHHHHHHHHHHHTTCTTC
T ss_pred hhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCC
Confidence 1 468999999999999999986
No 109
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.16 E-value=6.6e-11 Score=105.14 Aligned_cols=96 Identities=14% Similarity=0.102 Sum_probs=82.4
Q ss_pred HHHHHHhC-CCcHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH-------H
Q 023753 179 NNNYSNNN-HGSSSTDAYYEKMIEANPGN------ALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGN-------I 244 (277)
Q Consensus 179 Y~~m~e~~-Gd~deAi~~yekALeldP~n------~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~-------a 244 (277)
.+.++... +++++|+.+|++|+++.|.+ ..++.++|.++. ..|++++|+.+|+++++++|++.. +
T Consensus 123 lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 201 (292)
T 1qqe_A 123 LGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKA-LDGQYIEASDIYSKLIKSSMGNRLSQWSLKDY 201 (292)
T ss_dssp HHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHTTSSCTTTGGGHHHH
T ss_pred HHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHhcCCcccHHHHHH
Confidence 34677776 99999999999999998865 567899999997 899999999999999999998754 5
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 023753 245 LSLYADLIWQAHKDASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 245 l~~LA~ll~~~~Gd~deAi~~yekALeldPdD 276 (277)
+.++|.++.. +|++++|+.+|+++++++|+.
T Consensus 202 ~~~lg~~~~~-~g~~~~A~~~~~~al~l~p~~ 232 (292)
T 1qqe_A 202 FLKKGLCQLA-ATDAVAAARTLQEGQSEDPNF 232 (292)
T ss_dssp HHHHHHHHHH-TTCHHHHHHHHHGGGCC----
T ss_pred HHHHHHHHHH-cCCHHHHHHHHHHHHhhCCCC
Confidence 7889999999 999999999999999999974
No 110
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.16 E-value=1.1e-10 Score=103.72 Aligned_cols=95 Identities=18% Similarity=0.078 Sum_probs=83.0
Q ss_pred HHHHHhCCCcHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHhCCCC------HHHHH
Q 023753 180 NNYSNNNHGSSSTDAYYEKMIEANPGN------ALLLGNYARFLKEVR-GDFAKAEELCGRAILANPSD------GNILS 246 (277)
Q Consensus 180 ~~m~e~~Gd~deAi~~yekALeldP~n------~~al~nLA~lL~e~~-Gd~eeA~e~~ekALeldP~n------~~al~ 246 (277)
+.++...|++++|+.+|++|+++.|.. +.++.++|.+|. .. +++++|+.+|++|+++.|.+ ..++.
T Consensus 84 g~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~-~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~ 162 (292)
T 1qqe_A 84 YKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILE-NDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFI 162 (292)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-HhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHH
Confidence 356667799999999999999998754 468899999886 75 99999999999999998865 56788
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 023753 247 LYADLIWQAHKDASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 247 ~LA~ll~~~~Gd~deAi~~yekALeldPdD 276 (277)
++|.++.. +|++++|+.+|++++++.|++
T Consensus 163 ~lg~~~~~-~g~~~~A~~~~~~al~~~~~~ 191 (292)
T 1qqe_A 163 KCADLKAL-DGQYIEASDIYSKLIKSSMGN 191 (292)
T ss_dssp HHHHHHHH-TTCHHHHHHHHHHHHHTTSSC
T ss_pred HHHHHHHH-hCCHHHHHHHHHHHHHHHhcC
Confidence 99999999 999999999999999998875
No 111
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.16 E-value=1.7e-10 Score=85.34 Aligned_cols=69 Identities=14% Similarity=0.042 Sum_probs=65.5
Q ss_pred CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 023753 206 NALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 206 n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~deAi~~yekALeldPdD 276 (277)
++.+++++|.++. ..+++++|+.+|++|++++|+++.+++++|.+++. .|++++|+.+|+++++++|++
T Consensus 3 ~~~~~~~~g~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~p~~ 71 (111)
T 2l6j_A 3 QFEKQKEQGNSLF-KQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIK-LGEYTQAIQMCQQGLRYTSTA 71 (111)
T ss_dssp HHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTSCSST
T ss_pred hHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHhCCCc
Confidence 4678899999987 89999999999999999999999999999999999 999999999999999999986
No 112
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.14 E-value=2.1e-10 Score=88.07 Aligned_cols=71 Identities=15% Similarity=0.054 Sum_probs=67.0
Q ss_pred CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 023753 204 PGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 204 P~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~deAi~~yekALeldPdD 276 (277)
|..+..+.++|..++ ..+++++|+.+|++|++++|+++.++.++|.+++. .+++++|+.+|+++++++|++
T Consensus 1 p~~a~~~~~~g~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~-~~~~~~A~~~~~~al~~~p~~ 71 (126)
T 3upv_A 1 SMKAEEARLEGKEYF-TKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAK-LMSFPEAIADCNKAIEKDPNF 71 (126)
T ss_dssp CHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTC
T ss_pred CchHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH-hcCHHHHHHHHHHHHHhCCCc
Confidence 456788999999887 89999999999999999999999999999999999 999999999999999999986
No 113
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.13 E-value=2.1e-10 Score=102.30 Aligned_cols=98 Identities=13% Similarity=0.174 Sum_probs=63.5
Q ss_pred hHHHHHHhCCCcHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc
Q 023753 178 SNNNYSNNNHGSSSTDAYYEKMIEANPGNAL-LLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAH 256 (277)
Q Consensus 178 yY~~m~e~~Gd~deAi~~yekALeldP~n~~-al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~ 256 (277)
.|..++...+++++|+..|+++++++|.++. +|.+++.++. ..+++++|+.+|++|++.+|.+..++..++.+.+...
T Consensus 104 ~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~a~~~~p~~~~~~~~~a~~~~~~~ 182 (308)
T 2ond_A 104 AYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFAR-RAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCS 182 (308)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHH-HHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHHHHTS
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHH-HhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHc
Confidence 4556667778888888888888888888876 7888887765 5566666666666666665555555544444433213
Q ss_pred CCHHHHHHHHHHHHHhCCCC
Q 023753 257 KDASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 257 Gd~deAi~~yekALeldPdD 276 (277)
|++++|+.+|++|++++|++
T Consensus 183 ~~~~~A~~~~~~al~~~p~~ 202 (308)
T 2ond_A 183 KDKSVAFKIFELGLKKYGDI 202 (308)
T ss_dssp CCHHHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHhCCCc
Confidence 55555666666555555543
No 114
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.13 E-value=2.4e-10 Score=97.43 Aligned_cols=96 Identities=10% Similarity=0.008 Sum_probs=84.1
Q ss_pred HHHHHhCCCcHHHHHHHHHHHHhCCCCHH---HHHHHHHHHHHH-----------------cCCHHHHHHHHHHHHHhCC
Q 023753 180 NNYSNNNHGSSSTDAYYEKMIEANPGNAL---LLGNYARFLKEV-----------------RGDFAKAEELCGRAILANP 239 (277)
Q Consensus 180 ~~m~e~~Gd~deAi~~yekALeldP~n~~---al~nLA~lL~e~-----------------~Gd~eeA~e~~ekALeldP 239 (277)
...+...+++++|+..|+++++.+|+++. +++.+|.++... .+++++|+.+|+++++.+|
T Consensus 48 g~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P 127 (225)
T 2yhc_A 48 IYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYP 127 (225)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCT
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCc
Confidence 46677789999999999999999999864 788899887621 4689999999999999999
Q ss_pred CCHHHH-----------------HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 023753 240 SDGNIL-----------------SLYADLIWQAHKDASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 240 ~n~~al-----------------~~LA~ll~~~~Gd~deAi~~yekALeldPdD 276 (277)
+++.+. ..+|.+++. .|++++|+..|+++++..|++
T Consensus 128 ~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~~l~~~p~~ 180 (225)
T 2yhc_A 128 NSQYTTDATKRLVFLKDRLAKYEYSVAEYYTE-RGAWVAVVNRVEGMLRDYPDT 180 (225)
T ss_dssp TCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHSTTS
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCcHHHHHHHHHHHHHHCcCC
Confidence 987654 567888998 999999999999999999985
No 115
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.13 E-value=1.6e-10 Score=84.41 Aligned_cols=72 Identities=11% Similarity=0.147 Sum_probs=68.9
Q ss_pred hCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 023753 202 ANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPD 275 (277)
Q Consensus 202 ldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~deAi~~yekALeldPd 275 (277)
++|+++.+++.+|.++. ..+++++|+.+|+++++++|.++.++..+|.++.. .+++++|+.+|+++++++|+
T Consensus 1 l~p~~~~~~~~~~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~a~~~~~~ 72 (112)
T 2kck_A 1 MVDQNPEEYYLEGVLQY-DAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYN-LERYEEAVDCYNYVINVIED 72 (112)
T ss_dssp CCCSSTTGGGGHHHHHH-SSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHTSCC
T ss_pred CCCCcHHHHHHHHHHHH-HhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHhCcc
Confidence 47999999999999987 89999999999999999999999999999999999 99999999999999999997
No 116
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.12 E-value=6.4e-11 Score=108.72 Aligned_cols=95 Identities=12% Similarity=0.020 Sum_probs=51.0
Q ss_pred HHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 023753 181 NYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDAS 260 (277)
Q Consensus 181 ~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~d 260 (277)
..+...+++++|+.+|++||+++|+++.+|+++|.+|. ..+++++|+.+|++|++++|+++.++..++.+.....++.+
T Consensus 238 ~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~a~~-~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~~~~~~~ 316 (338)
T 2if4_A 238 ACLIKLKRYDEAIGHCNIVLTEEEKNPKALFRRGKAKA-ELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQEKALYQ 316 (338)
T ss_dssp HHHHTTTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-TTTCHHHHHHHHHHTTC------------------------
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
Confidence 34445789999999999999999999999999999997 89999999999999999999999999999998555477889
Q ss_pred HHHHHHHHHHHhCCCC
Q 023753 261 RAESYFDQAVKSAPDD 276 (277)
Q Consensus 261 eAi~~yekALeldPdD 276 (277)
+|..+|.+++..+|++
T Consensus 317 ~a~~~~~~~l~~~p~~ 332 (338)
T 2if4_A 317 KQKEMYKGIFKGKDEG 332 (338)
T ss_dssp ----------------
T ss_pred HHHHHHHHhhCCCCCC
Confidence 9999999999999976
No 117
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.12 E-value=6e-10 Score=85.65 Aligned_cols=74 Identities=19% Similarity=0.116 Sum_probs=68.7
Q ss_pred HhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 023753 201 EANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 201 eldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~deAi~~yekALeldPdD 276 (277)
..+|.++.+++.+|.++. ..+++++|+.+|++++.++|+++.+++.+|.++.. .+++++|+.+|+++++++|++
T Consensus 3 ~~~~~~~~~~~~~g~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~al~~~p~~ 76 (137)
T 3q49_B 3 HMKSPSAQELKEQGNRLF-VGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLK-MQQPEQALADCRRALELDGQS 76 (137)
T ss_dssp ---CCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTC
T ss_pred CCccccHHHHHHHHHHHH-HhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHhCchh
Confidence 467889999999999997 89999999999999999999999999999999999 999999999999999999986
No 118
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.11 E-value=6.7e-10 Score=105.11 Aligned_cols=94 Identities=14% Similarity=0.050 Sum_probs=60.4
Q ss_pred HHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 023753 181 NYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDAS 260 (277)
Q Consensus 181 ~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~d 260 (277)
.++...|++++|+.+|+++++++|.+..+|+.++.++. ..|++++|+++|+++++.+|+++.++..++.++.. .|+++
T Consensus 381 ~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~ 458 (597)
T 2xpi_A 381 IYYLCVNKISEARRYFSKSSTMDPQFGPAWIGFAHSFA-IEGEHDQAISAYTTAARLFQGTHLPYLFLGMQHMQ-LGNIL 458 (597)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHH-HTCHH
T ss_pred HHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHH-cCCHH
Confidence 44555566666666666666666666666666666664 56666666666666666666666666666666666 66666
Q ss_pred HHHHHHHHHHHhCCCC
Q 023753 261 RAESYFDQAVKSAPDD 276 (277)
Q Consensus 261 eAi~~yekALeldPdD 276 (277)
+|+++|+++++++|++
T Consensus 459 ~A~~~~~~~~~~~~~~ 474 (597)
T 2xpi_A 459 LANEYLQSSYALFQYD 474 (597)
T ss_dssp HHHHHHHHHHHHCCCC
T ss_pred HHHHHHHHHHHhCCCC
Confidence 6666666666666654
No 119
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.10 E-value=1.7e-10 Score=96.88 Aligned_cols=94 Identities=16% Similarity=0.186 Sum_probs=85.5
Q ss_pred hHHHHHHhCCCcHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCC
Q 023753 178 SNNNYSNNNHGSSSTDAYYEKMIEA--------NPGNALLLGNYARFLKEVRGDFAKAEELCGRAILA--------NPSD 241 (277)
Q Consensus 178 yY~~m~e~~Gd~deAi~~yekALel--------dP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALel--------dP~n 241 (277)
.+..++...+++++|+.+|++++++ +|....++.++|.++. ..+++++|+.+|++++++ .|..
T Consensus 90 ~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 168 (283)
T 3edt_B 90 NLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQ-NQGKAEEVEYYYRRALEIYATRLGPDDPNV 168 (283)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHHHHHSCTTCHHH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHHhcCCCCHHH
Confidence 3456777789999999999999998 5777889999999997 899999999999999999 7778
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 023753 242 GNILSLYADLIWQAHKDASRAESYFDQAVKSA 273 (277)
Q Consensus 242 ~~al~~LA~ll~~~~Gd~deAi~~yekALeld 273 (277)
..++..+|.++.. .|++++|+.+|++++++.
T Consensus 169 ~~~~~~la~~~~~-~g~~~~A~~~~~~~l~~~ 199 (283)
T 3edt_B 169 AKTKNNLASCYLK-QGKYQDAETLYKEILTRA 199 (283)
T ss_dssp HHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHH
Confidence 8899999999999 999999999999999874
No 120
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.10 E-value=2.5e-10 Score=104.94 Aligned_cols=97 Identities=18% Similarity=0.118 Sum_probs=85.2
Q ss_pred hHHHHHHhCCCcHHHHHHHHHHHHhCCCCHH------HHHHHHHHHHHH---cCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 023753 178 SNNNYSNNNHGSSSTDAYYEKMIEANPGNAL------LLGNYARFLKEV---RGDFAKAEELCGRAILANPSDGNILSLY 248 (277)
Q Consensus 178 yY~~m~e~~Gd~deAi~~yekALeldP~n~~------al~nLA~lL~e~---~Gd~eeA~e~~ekALeldP~n~~al~~L 248 (277)
.+..++...+++++|+.+|+++++++|+++. ++.++|.++. . .+++++|+.+|++++.++|+++.++..+
T Consensus 377 ~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l 455 (514)
T 2gw1_A 377 FFAEILTDKNDFDKALKQYDLAIELENKLDGIYVGIAPLVGKATLLT-RNPTVENFIEATNLLEKASKLDPRSEQAKIGL 455 (514)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHTSSSCSSCSHHHHHHHHHHH-TSCCTTHHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHh-hhhhcCCHHHHHHHHHHHHHhCcccHHHHHHH
Confidence 3446667778999999999999999888855 8889998886 7 8999999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 023753 249 ADLIWQAHKDASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 249 A~ll~~~~Gd~deAi~~yekALeldPdD 276 (277)
|.++.. .|++++|+.+|+++++++|++
T Consensus 456 a~~~~~-~g~~~~A~~~~~~a~~~~~~~ 482 (514)
T 2gw1_A 456 AQMKLQ-QEDIDEAITLFEESADLARTM 482 (514)
T ss_dssp HHHHHH-TTCHHHHHHHHHHHHHHCSSH
T ss_pred HHHHHH-hcCHHHHHHHHHHHHHhcccc
Confidence 999998 999999999999999999874
No 121
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.09 E-value=9.7e-10 Score=101.18 Aligned_cols=97 Identities=12% Similarity=0.093 Sum_probs=81.6
Q ss_pred HHHHHHhCCCcHHHHHHHHHHHHh---------CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--------CCC
Q 023753 179 NNNYSNNNHGSSSTDAYYEKMIEA---------NPGNALLLGNYARFLKEVRGDFAKAEELCGRAILAN--------PSD 241 (277)
Q Consensus 179 Y~~m~e~~Gd~deAi~~yekALel---------dP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeld--------P~n 241 (277)
.+.++...|++++|+.+|++|+++ +|....++.|+|.+|. ..|++++|+.+|++|+++. +..
T Consensus 57 Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~-~~g~~~~A~~~~~ka~~i~~~~~~~~~~~~ 135 (472)
T 4g1t_A 57 LAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYY-HMGRLSDVQIYVDKVKHVCEKFSSPYRIES 135 (472)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHSCCSSCCCC
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHH-HcCChHHHHHHHHHHHHHhHhcccccchhh
Confidence 346667789999999999999987 7788889999999997 7999999999999999873 456
Q ss_pred HHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCCCC
Q 023753 242 GNILSLYADLIWQA-HKDASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 242 ~~al~~LA~ll~~~-~Gd~deAi~~yekALeldPdD 276 (277)
+.++..+|.++... .++|++|+.+|++|++++|++
T Consensus 136 ~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~ 171 (472)
T 4g1t_A 136 PELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKN 171 (472)
T ss_dssp HHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCC
Confidence 78888888777652 347899999999999999986
No 122
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.09 E-value=4.8e-10 Score=90.33 Aligned_cols=72 Identities=18% Similarity=0.111 Sum_probs=68.1
Q ss_pred CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 023753 203 NPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 203 dP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~deAi~~yekALeldPdD 276 (277)
++.++.+++.+|.+++ ..+++++|+.+|++|++++|+++.+++++|.+++. .+++++|+.+|++|++++|++
T Consensus 7 ~~~~a~~~~~~g~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~p~~ 78 (164)
T 3sz7_A 7 PTPESDKLKSEGNAAM-ARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSA-SGQHEKAAEDAELATVVDPKY 78 (164)
T ss_dssp CCHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTC
T ss_pred hhhhHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHhCCCC
Confidence 4567889999999997 89999999999999999999999999999999999 999999999999999999986
No 123
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.08 E-value=4.5e-10 Score=91.94 Aligned_cols=83 Identities=20% Similarity=0.176 Sum_probs=76.3
Q ss_pred CcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC--HHHHHHHHHHHHHHcCCHHHHHHH
Q 023753 188 GSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSD--GNILSLYADLIWQAHKDASRAESY 265 (277)
Q Consensus 188 d~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n--~~al~~LA~ll~~~~Gd~deAi~~ 265 (277)
+..+|+.+|+++++++|+++.+++++|.++. ..|++++|+.+|+++++++|+. +.++..++.++.. .|+.++|+.+
T Consensus 89 ~~~~a~~~~~~al~~~P~~~~~~~~la~~~~-~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~-~g~~~~A~~~ 166 (176)
T 2r5s_A 89 AESPELKRLEQELAANPDNFELACELAVQYN-QVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSA-LGQGNAIASK 166 (176)
T ss_dssp TSCHHHHHHHHHHHHSTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHH-HCSSCHHHHH
T ss_pred ccchHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHH-hCCCCcHHHH
Confidence 3456899999999999999999999999997 8999999999999999999975 6699999999998 9999999999
Q ss_pred HHHHHHh
Q 023753 266 FDQAVKS 272 (277)
Q Consensus 266 yekALel 272 (277)
|+++|..
T Consensus 167 y~~al~~ 173 (176)
T 2r5s_A 167 YRRQLYS 173 (176)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999863
No 124
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.08 E-value=3.2e-10 Score=97.11 Aligned_cols=96 Identities=21% Similarity=0.264 Sum_probs=85.3
Q ss_pred HHHHHHhCCCcHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-------------
Q 023753 179 NNNYSNNNHGSSSTDAYYEKMIEA--------NPGNALLLGNYARFLKEVRGDFAKAEELCGRAILA------------- 237 (277)
Q Consensus 179 Y~~m~e~~Gd~deAi~~yekALel--------dP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALel------------- 237 (277)
+..++...+++++|+.+|++++++ +|....++.++|.++. ..|++++|+.+|++++++
T Consensus 159 la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 237 (311)
T 3nf1_A 159 LALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYL-KQGKFKQAETLYKEILTRAHEREFGSVDDEN 237 (311)
T ss_dssp HHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHHHHC------
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHHhcCCCCCcch
Confidence 446677789999999999999999 7777889999999997 899999999999999984
Q ss_pred ------------------------------------CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 023753 238 ------------------------------------NPSDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 238 ------------------------------------dP~n~~al~~LA~ll~~~~Gd~deAi~~yekALeldPdD 276 (277)
+|.++.++..+|.++.. .|++++|+.+|++|+++.|..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~l~~~~ 311 (311)
T 3nf1_A 238 KPIWMHAEEREECKGKQKDGTSFGEYGGWYKACKVDSPTVTTTLKNLGALYRR-QGKFEAAETLEEAAMRSRKQG 311 (311)
T ss_dssp CCHHHHHHHHHHC-------CCSCCCC---------CHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHhcCchhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHhhcC
Confidence 46778889999999999 999999999999999998863
No 125
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.07 E-value=8.8e-10 Score=84.67 Aligned_cols=72 Identities=19% Similarity=0.070 Sum_probs=65.8
Q ss_pred CCCCHHHHHHHHHHHHHHcCC---HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 023753 203 NPGNALLLGNYARFLKEVRGD---FAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 203 dP~n~~al~nLA~lL~e~~Gd---~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~deAi~~yekALeldPdD 276 (277)
+|+|+.++..+|.+++ ..++ .++|..++++|++++|+++.+++.+|.++++ .|+|++|+.+|+++++.+|.+
T Consensus 2 ~p~~~~~~~~~a~al~-~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~-~g~y~~Ai~~w~~~l~~~p~~ 76 (93)
T 3bee_A 2 NAVTATQLAAKATTLY-YLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFI-SFRFQEAIDTWVLLLDSNDPN 76 (93)
T ss_dssp CCCCHHHHHHHHHHHH-HTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTCCCTT
T ss_pred CCCCHHHHHHHHHHHH-HhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHhhCCCC
Confidence 7899999999999886 3444 6999999999999999999999999999999 999999999999999999874
No 126
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.06 E-value=1e-10 Score=112.75 Aligned_cols=96 Identities=14% Similarity=-0.005 Sum_probs=82.9
Q ss_pred HHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH--HHHHc
Q 023753 179 NNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADL--IWQAH 256 (277)
Q Consensus 179 Y~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~l--l~~~~ 256 (277)
....+...+++++|+.+|++|++++|+++.+++++|.+|. ..+++++|+++|++|++++|+++.++..++.+ +.. +
T Consensus 46 lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~-~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~~~~~-~ 123 (477)
T 1wao_1 46 RSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNM-ALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVK-Q 123 (477)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHSTTCTTHHHHHHHHHHHHH-H
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH-H
Confidence 3466677899999999999999999999999999999997 89999999999999999999999999999988 777 8
Q ss_pred CCHHHHHHHHH-----------HHHHhCCCC
Q 023753 257 KDASRAESYFD-----------QAVKSAPDD 276 (277)
Q Consensus 257 Gd~deAi~~ye-----------kALeldPdD 276 (277)
+++++|+++++ ++++++|+.
T Consensus 124 g~~~~A~~~~~~~~~~~~~~~~~al~~~~~~ 154 (477)
T 1wao_1 124 KAFERAIAGDEHKRSVVDSLDIESMTIEDEY 154 (477)
T ss_dssp HHHCCC------CCSTTTCCTTSSCCCCTTC
T ss_pred HHHHHHhccccccchhHhhhhhhhccccccc
Confidence 99999999999 888877764
No 127
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.06 E-value=4.1e-10 Score=94.57 Aligned_cols=92 Identities=23% Similarity=0.304 Sum_probs=83.0
Q ss_pred HHHHHHhCCCcHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCH
Q 023753 179 NNNYSNNNHGSSSTDAYYEKMIEA--------NPGNALLLGNYARFLKEVRGDFAKAEELCGRAILA--------NPSDG 242 (277)
Q Consensus 179 Y~~m~e~~Gd~deAi~~yekALel--------dP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALel--------dP~n~ 242 (277)
...++...+++++|+.+|++++++ +|..+.++.++|.++. ..+++++|+.+|++|+.+ +|...
T Consensus 49 l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 127 (283)
T 3edt_B 49 LALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYG-KRGKYKEAEPLCKRALEIREKVLGKFHPDVA 127 (283)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHHHHHHHcCCCChHHH
Confidence 446666789999999999999988 4666789999999997 899999999999999998 57778
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 023753 243 NILSLYADLIWQAHKDASRAESYFDQAVKS 272 (277)
Q Consensus 243 ~al~~LA~ll~~~~Gd~deAi~~yekALel 272 (277)
.++.++|.+++. .|++++|+.+|++++++
T Consensus 128 ~~~~~la~~~~~-~g~~~~A~~~~~~al~~ 156 (283)
T 3edt_B 128 KQLNNLALLCQN-QGKAEEVEYYYRRALEI 156 (283)
T ss_dssp HHHHHHHHHHHT-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-cCCHHHHHHHHHHHHHH
Confidence 899999999999 99999999999999988
No 128
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.04 E-value=1.5e-09 Score=80.85 Aligned_cols=79 Identities=13% Similarity=0.067 Sum_probs=72.7
Q ss_pred HHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCC
Q 023753 179 NNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKD 258 (277)
Q Consensus 179 Y~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd 258 (277)
+..++...+++++|+.+|+++++++|+++.+++.+|.++. ..+++++|+.+|+++++++|+++.++..++.++.. .++
T Consensus 52 ~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~-~~~ 129 (131)
T 2vyi_A 52 RAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALS-SLNKHVEAVAYYKKALELDPDNETYKSNLKIAELK-LRE 129 (131)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH-HTT
T ss_pred HHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHHHHHH-HhCCHHHHHHHHHHHHhcCccchHHHHHHHHHHHH-Hhc
Confidence 3466667899999999999999999999999999999987 89999999999999999999999999999999988 776
Q ss_pred H
Q 023753 259 A 259 (277)
Q Consensus 259 ~ 259 (277)
+
T Consensus 130 ~ 130 (131)
T 2vyi_A 130 A 130 (131)
T ss_dssp C
T ss_pred C
Confidence 4
No 129
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.03 E-value=9.6e-10 Score=91.21 Aligned_cols=91 Identities=18% Similarity=0.105 Sum_probs=75.4
Q ss_pred HHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCC
Q 023753 179 NNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKD 258 (277)
Q Consensus 179 Y~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd 258 (277)
...++...+++++|+.+|+++++++|+++.+++++|.++. ..+++++|+.+|++|++++|+++.++..++.++.. .++
T Consensus 94 la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~~~ 171 (198)
T 2fbn_A 94 LATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANM-YFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNK-LKE 171 (198)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH-HHH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHhCcccHHHHHHHHHHHH-HcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHH-HHH
Confidence 3466677899999999999999999999999999999997 89999999999999999999999999999999988 888
Q ss_pred HHHHH-HHHHHHHH
Q 023753 259 ASRAE-SYFDQAVK 271 (277)
Q Consensus 259 ~deAi-~~yekALe 271 (277)
++++. ..|.+.+.
T Consensus 172 ~~~~~~~~~~~~f~ 185 (198)
T 2fbn_A 172 ARKKDKLTFGGMFD 185 (198)
T ss_dssp HHC-----------
T ss_pred HHHHHHHHHHHHhc
Confidence 88777 44554443
No 130
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.02 E-value=1.8e-09 Score=81.40 Aligned_cols=78 Identities=14% Similarity=0.042 Sum_probs=71.1
Q ss_pred HHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCC
Q 023753 179 NNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKD 258 (277)
Q Consensus 179 Y~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd 258 (277)
+..++...+++++|+.+|+++++++|+++.+++++|.++. ..+++++|+.+|+++++++|.+..++..++.++.. +++
T Consensus 56 la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~-~~~ 133 (133)
T 2lni_A 56 RAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALE-AMKDYTKAMDVYQKALDLDSSCKEAADGYQRCMMA-QYN 133 (133)
T ss_dssp HHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCGGGTHHHHHHHHHHHH-HTC
T ss_pred HHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHHHHH-HHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH-hcC
Confidence 3456667799999999999999999999999999999987 89999999999999999999999999999999987 553
No 131
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.00 E-value=1.6e-09 Score=96.54 Aligned_cols=85 Identities=14% Similarity=0.160 Sum_probs=77.7
Q ss_pred CCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC--HHHHHHHHHHHHHHcCCHHHHH
Q 023753 186 NHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSD--GNILSLYADLIWQAHKDASRAE 263 (277)
Q Consensus 186 ~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n--~~al~~LA~ll~~~~Gd~deAi 263 (277)
.++.++|+..|+++++++|+++.+++++|.+|. ..|++++|+.+|+++++++|++ +.++.+++.++.. .|+.++|+
T Consensus 198 ~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~-~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~-~g~~~~a~ 275 (287)
T 3qou_A 198 QAADTPEIQQLQQQVAENPEDAALATQLALQLH-QVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAA-LGTGDALA 275 (287)
T ss_dssp HHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHH-HCTTCHHH
T ss_pred hcccCccHHHHHHHHhcCCccHHHHHHHHHHHH-HcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHH-cCCCCcHH
Confidence 345556788888999999999999999999997 8999999999999999999998 8999999999988 99999999
Q ss_pred HHHHHHHHh
Q 023753 264 SYFDQAVKS 272 (277)
Q Consensus 264 ~~yekALel 272 (277)
..|++++..
T Consensus 276 ~~~r~al~~ 284 (287)
T 3qou_A 276 SXYRRQLYA 284 (287)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999864
No 132
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.00 E-value=1.3e-09 Score=83.50 Aligned_cols=93 Identities=13% Similarity=0.021 Sum_probs=71.3
Q ss_pred HHHHHHhCCCcHHHHHHHHHHHHhCCCCH------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHH
Q 023753 179 NNNYSNNNHGSSSTDAYYEKMIEANPGNA------LLLGNYARFLKEVRGDFAKAEELCGRAILANPSD------GNILS 246 (277)
Q Consensus 179 Y~~m~e~~Gd~deAi~~yekALeldP~n~------~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n------~~al~ 246 (277)
...++...+++++|+.+|++++++.+... .++.++|.++. ..+++++|+.+|++|+.+.+.. ..++.
T Consensus 15 l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~ 93 (164)
T 3ro3_A 15 LGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYI-FLGEFETASEYYKKTLLLARQLKDRAVEAQSCY 93 (164)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHH
Confidence 34556667888888888888888765422 47778888776 7888888888888888876543 55777
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 023753 247 LYADLIWQAHKDASRAESYFDQAVKSA 273 (277)
Q Consensus 247 ~LA~ll~~~~Gd~deAi~~yekALeld 273 (277)
++|.++.. .+++++|+.+|++++++.
T Consensus 94 ~l~~~~~~-~~~~~~A~~~~~~a~~~~ 119 (164)
T 3ro3_A 94 SLGNTYTL-LQDYEKAIDYHLKHLAIA 119 (164)
T ss_dssp HHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-HhhHHHHHHHHHHHHHHH
Confidence 88888888 888888888888888763
No 133
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=98.99 E-value=1.4e-09 Score=100.04 Aligned_cols=94 Identities=18% Similarity=0.116 Sum_probs=53.2
Q ss_pred HHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH------------------cCCHHHHHHHHHHHHHhCCCCH
Q 023753 181 NYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEV------------------RGDFAKAEELCGRAILANPSDG 242 (277)
Q Consensus 181 ~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~------------------~Gd~eeA~e~~ekALeldP~n~ 242 (277)
.++...+++++|+.+|++|++++|+++.+++++|.++... ...+++|+.+|++|++++|.++
T Consensus 255 ~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~ 334 (472)
T 4g1t_A 255 KFYRRKDEPDKAIELLKKALEYIPNNAYLHCQIGCCYRAKVFQVMNLRENGMYGKRKLLELIGHAVAHLKKADEANDNLF 334 (472)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHHHHHHCTTTC
T ss_pred HHHHHcCchHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhcCCchh
Confidence 4444556666666666666666666666666665544210 1123445555555555555555
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 023753 243 NILSLYADLIWQAHKDASRAESYFDQAVKSAPD 275 (277)
Q Consensus 243 ~al~~LA~ll~~~~Gd~deAi~~yekALeldPd 275 (277)
.++..+|.++.. .+++++|+.+|++|++++|+
T Consensus 335 ~~~~~lg~~~~~-~~~~~~A~~~~~kaL~~~~~ 366 (472)
T 4g1t_A 335 RVCSILASLHAL-ADQYEEAEYYFQKEFSKELT 366 (472)
T ss_dssp CCHHHHHHHHHH-TTCHHHHHHHHHHHHHSCCC
T ss_pred hhhhhHHHHHHH-hccHHHHHHHHHHHHhcCCC
Confidence 555555555555 66666677667666666654
No 134
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.99 E-value=6e-09 Score=91.89 Aligned_cols=92 Identities=10% Similarity=0.052 Sum_probs=79.4
Q ss_pred HHHHhCCCcHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHcCCHHHHHHHHHHHH---HhCCCCH----HHHHH
Q 023753 181 NYSNNNHGSSSTDAYYEKMIEANPGN------ALLLGNYARFLKEVRGDFAKAEELCGRAI---LANPSDG----NILSL 247 (277)
Q Consensus 181 ~m~e~~Gd~deAi~~yekALeldP~n------~~al~nLA~lL~e~~Gd~eeA~e~~ekAL---eldP~n~----~al~~ 247 (277)
.++...+++++|+.+|++|+++.+.. ..+++++|.+|. ..+++++|+.+|++|+ +..|++. .++++
T Consensus 123 ~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~-~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~n 201 (293)
T 2qfc_A 123 AYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYA-ENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYN 201 (293)
T ss_dssp HHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHH
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHh
Confidence 44556689999999999999876554 568999999997 8999999999999999 5567653 68999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 023753 248 YADLIWQAHKDASRAESYFDQAVKSAP 274 (277)
Q Consensus 248 LA~ll~~~~Gd~deAi~~yekALeldP 274 (277)
+|.+|.. ++++++|+.+|++|+++.+
T Consensus 202 lg~~y~~-~~~y~~Al~~~~kal~~~~ 227 (293)
T 2qfc_A 202 HAKALYL-DSRYEESLYQVNKAIEISC 227 (293)
T ss_dssp HHHHHHH-TTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-HhhHHHHHHHHHHHHHHHH
Confidence 9999999 9999999999999998753
No 135
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=98.98 E-value=2.9e-09 Score=83.36 Aligned_cols=66 Identities=11% Similarity=-0.045 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 023753 209 LLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 209 al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~deAi~~yekALeldPdD 276 (277)
.++.+|..+. ..|++++|+.+|++|++++|+++.+++.+|.++.. .|++++|+.+|++|++++|++
T Consensus 19 ~~~~~g~~~~-~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~-~g~~~~A~~~~~~al~l~P~~ 84 (121)
T 1hxi_A 19 NPMEEGLSML-KLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAE-NEKDGLAIIALNHARMLDPKD 84 (121)
T ss_dssp CHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTC
T ss_pred hHHHHHHHHH-HcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCCCC
Confidence 3678888886 79999999999999999999999999999999999 999999999999999999986
No 136
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.98 E-value=3.3e-09 Score=78.00 Aligned_cols=64 Identities=17% Similarity=0.202 Sum_probs=60.3
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 023753 211 GNYARFLKEVRGDFAKAEELCGRAILANPSDGN-ILSLYADLIWQAHKDASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 211 ~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~-al~~LA~ll~~~~Gd~deAi~~yekALeldPdD 276 (277)
++.|..+. ..+++++|+.+|+++++++|+++. +++.+|.++.. .+++++|+.+|+++++++|++
T Consensus 4 ~~~a~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~-~~~~~~A~~~~~~al~~~p~~ 68 (99)
T 2kc7_A 4 LKTIKELI-NQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRK-LGDWQKALNNYQSAIELNPDS 68 (99)
T ss_dssp HHHHHHHH-HHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHCTTS
T ss_pred HHHHHHHH-HcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHhcCCCc
Confidence 56787776 789999999999999999999999 99999999999 999999999999999999986
No 137
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.97 E-value=2.4e-09 Score=82.02 Aligned_cols=95 Identities=11% Similarity=0.046 Sum_probs=80.8
Q ss_pred HHHHHHhCCCcHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC------CHHHHH
Q 023753 179 NNNYSNNNHGSSSTDAYYEKMIEANPGN------ALLLGNYARFLKEVRGDFAKAEELCGRAILANPS------DGNILS 246 (277)
Q Consensus 179 Y~~m~e~~Gd~deAi~~yekALeldP~n------~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~------n~~al~ 246 (277)
...++...+++++|+.+|++++++.+.. ..++.++|.++. ..+++++|+.+|++++.+.+. .+.++.
T Consensus 55 l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~ 133 (164)
T 3ro3_A 55 LGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYT-LLQDYEKAIDYHLKHLAIAQELKDRIGEGRACW 133 (164)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHHHHHccchHhHHHHHH
Confidence 4466677899999999999999986653 568899999887 899999999999999987432 256788
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 023753 247 LYADLIWQAHKDASRAESYFDQAVKSAPD 275 (277)
Q Consensus 247 ~LA~ll~~~~Gd~deAi~~yekALeldPd 275 (277)
.+|.+++. .|++++|+.+|++++++...
T Consensus 134 ~la~~~~~-~g~~~~A~~~~~~a~~~~~~ 161 (164)
T 3ro3_A 134 SLGNAYTA-LGNHDQAMHFAEKHLEISRE 161 (164)
T ss_dssp HHHHHHHH-HTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHH-ccCHHHHHHHHHHHHHHHHH
Confidence 99999999 99999999999999987543
No 138
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.97 E-value=2.2e-09 Score=82.24 Aligned_cols=75 Identities=17% Similarity=0.147 Sum_probs=65.4
Q ss_pred HHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 023753 179 NNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQ 254 (277)
Q Consensus 179 Y~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~ 254 (277)
...++...+++++|+.+|+++++++|+++.+++++|.++. ..|++++|+.+|++++..+|+++.+......+...
T Consensus 33 lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~~~ai~~~ 107 (117)
T 3k9i_A 33 LGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLY-NLGRYEQGVELLLKIIAETSDDETIQSYKQAILFY 107 (117)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHCCCHHHHHTHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Confidence 3456777899999999999999999999999999999997 89999999999999999999999876554444433
No 139
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.97 E-value=1.6e-09 Score=96.86 Aligned_cols=93 Identities=14% Similarity=0.066 Sum_probs=78.7
Q ss_pred HHHHHhCCCcHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHH
Q 023753 180 NNYSNNNHGSSSTDAYYEKMIEANPGN------ALLLGNYARFLKEVRGDFAKAEELCGRAILANPSD------GNILSL 247 (277)
Q Consensus 180 ~~m~e~~Gd~deAi~~yekALeldP~n------~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n------~~al~~ 247 (277)
..++.. +++++|+.+|++|+++.|.. ..++.++|.++. ..|++++|+.+|++|+.+.|.+ ..++..
T Consensus 123 g~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 200 (307)
T 2ifu_A 123 GKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLV-RQQKFDEAAASLQKEKSMYKEMENYPTCYKKCIA 200 (307)
T ss_dssp HHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHHcCChhHHHHHHHH
Confidence 355666 99999999999999988754 578889999887 7999999999999999987654 346778
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 023753 248 YADLIWQAHKDASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 248 LA~ll~~~~Gd~deAi~~yekALeldPdD 276 (277)
++.+++. +|++++|+.+|++++ ++|+.
T Consensus 201 ~g~~~~~-~g~~~~A~~~~~~al-~~p~~ 227 (307)
T 2ifu_A 201 QVLVQLH-RADYVAAQKCVRESY-SIPGF 227 (307)
T ss_dssp HHHHHHH-TTCHHHHHHHHHHHT-TSTTS
T ss_pred HHHHHHH-cCCHHHHHHHHHHHh-CCCCC
Confidence 8888888 899999999999999 98864
No 140
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.96 E-value=2.6e-09 Score=91.19 Aligned_cols=92 Identities=8% Similarity=0.059 Sum_probs=82.6
Q ss_pred HHHHhCCCcHHHHHHHHHHHHhCCCCH----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHHHHHHHHH
Q 023753 181 NYSNNNHGSSSTDAYYEKMIEANPGNA----LLLGNYARFLKEVRGDFAKAEELCGRAILA------NPSDGNILSLYAD 250 (277)
Q Consensus 181 ~m~e~~Gd~deAi~~yekALeldP~n~----~al~nLA~lL~e~~Gd~eeA~e~~ekALel------dP~n~~al~~LA~ 250 (277)
..+...+++++|+.+|+++++++|+++ .++..+|.++. ..+++++|+.+|++|+.+ .|..+.++..+|.
T Consensus 13 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~ 91 (338)
T 3ro2_A 13 ERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYF-YLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGN 91 (338)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHhccHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHH
Confidence 556678999999999999999999994 67889999887 899999999999999988 5566788999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCC
Q 023753 251 LIWQAHKDASRAESYFDQAVKSAP 274 (277)
Q Consensus 251 ll~~~~Gd~deAi~~yekALeldP 274 (277)
++.. .|++++|+.+|++++++.|
T Consensus 92 ~~~~-~g~~~~A~~~~~~al~~~~ 114 (338)
T 3ro2_A 92 TLKV-LGNFDEAIVCCQRHLDISR 114 (338)
T ss_dssp HHHH-TTCHHHHHHHHHHHHHHHH
T ss_pred HHHH-ccCHHHHHHHHHHHHHHHH
Confidence 9999 9999999999999998754
No 141
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.94 E-value=4e-09 Score=95.04 Aligned_cols=91 Identities=11% Similarity=0.099 Sum_probs=83.4
Q ss_pred HHHHhCCCcHHHHHHHHHHHHhCCCCH----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHHHHHHHHH
Q 023753 181 NYSNNNHGSSSTDAYYEKMIEANPGNA----LLLGNYARFLKEVRGDFAKAEELCGRAILA------NPSDGNILSLYAD 250 (277)
Q Consensus 181 ~m~e~~Gd~deAi~~yekALeldP~n~----~al~nLA~lL~e~~Gd~eeA~e~~ekALel------dP~n~~al~~LA~ 250 (277)
..+...+++++|+.+|+++++++|+++ .+++.+|.++. ..|++++|+.+|++|+++ +|....++..+|.
T Consensus 56 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~ 134 (411)
T 4a1s_A 56 ERLCNAGDCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYF-YLGDYNKAMQYHKHDLTLAKSMNDRLGEAKSSGNLGN 134 (411)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHhCcHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHccCchHHHHHHHHHHH
Confidence 555677999999999999999999997 58899999987 799999999999999998 6778889999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhC
Q 023753 251 LIWQAHKDASRAESYFDQAVKSA 273 (277)
Q Consensus 251 ll~~~~Gd~deAi~~yekALeld 273 (277)
++.. .|++++|+.+|++++++.
T Consensus 135 ~~~~-~g~~~~A~~~~~~al~~~ 156 (411)
T 4a1s_A 135 TLKV-MGRFDEAAICCERHLTLA 156 (411)
T ss_dssp HHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHH-CCCHHHHHHHHHHHHHHH
Confidence 9999 999999999999999873
No 142
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=98.94 E-value=1.4e-09 Score=93.10 Aligned_cols=95 Identities=16% Similarity=0.208 Sum_probs=84.4
Q ss_pred hHHHHHHhCCCcHHHHHHHHHHHHhC--------CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCC
Q 023753 178 SNNNYSNNNHGSSSTDAYYEKMIEAN--------PGNALLLGNYARFLKEVRGDFAKAEELCGRAILA--------NPSD 241 (277)
Q Consensus 178 yY~~m~e~~Gd~deAi~~yekALeld--------P~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALel--------dP~n 241 (277)
....++...+++++|+.+|++++++. |....++.++|.++. ..+++++|+.+|++++.+ +|..
T Consensus 116 ~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~ 194 (311)
T 3nf1_A 116 NLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQ-NQGKYEEVEYYYQRALEIYQTKLGPDDPNV 194 (311)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHHHHTSCTTCHHH
T ss_pred HHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHHHhCCCCHHH
Confidence 34466777899999999999999984 566788999999987 899999999999999999 7778
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 023753 242 GNILSLYADLIWQAHKDASRAESYFDQAVKSAP 274 (277)
Q Consensus 242 ~~al~~LA~ll~~~~Gd~deAi~~yekALeldP 274 (277)
..++..+|.++.. .|++++|+.+|++++++.|
T Consensus 195 ~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~ 226 (311)
T 3nf1_A 195 AKTKNNLASCYLK-QGKFKQAETLYKEILTRAH 226 (311)
T ss_dssp HHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHH
Confidence 8899999999999 9999999999999998643
No 143
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.94 E-value=1.2e-08 Score=75.30 Aligned_cols=75 Identities=20% Similarity=0.242 Sum_probs=69.6
Q ss_pred HHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 023753 179 NNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQ 254 (277)
Q Consensus 179 Y~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~ 254 (277)
+..++...+++++|+.+|+++++++|.++.++.++|.++. ..+++++|+.+|+++++++|+++.++..++.++..
T Consensus 49 la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~ 123 (125)
T 1na0_A 49 LGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYY-KQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQK 123 (125)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHh
Confidence 3466677899999999999999999999999999999997 89999999999999999999999999999998876
No 144
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.94 E-value=1.4e-09 Score=97.29 Aligned_cols=92 Identities=13% Similarity=0.138 Sum_probs=79.9
Q ss_pred HHHHhCCCcHHHHHHHHHHHHhCCC--C----HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHH
Q 023753 181 NYSNNNHGSSSTDAYYEKMIEANPG--N----ALLLGNYARFLKEVRGDFAKAEELCGRAILANPSD------GNILSLY 248 (277)
Q Consensus 181 ~m~e~~Gd~deAi~~yekALeldP~--n----~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n------~~al~~L 248 (277)
.++...+++++|+.+|++|+++.+. + ..++.++|.+|. . +++++|+.+|++|+++.|.. ..++.++
T Consensus 84 ~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~-~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~l 161 (307)
T 2ifu_A 84 MMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLME-P-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKA 161 (307)
T ss_dssp HHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHT-T-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-c-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHH
Confidence 5666779999999999999998543 2 467889999886 6 99999999999999998754 5788999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 023753 249 ADLIWQAHKDASRAESYFDQAVKSAPD 275 (277)
Q Consensus 249 A~ll~~~~Gd~deAi~~yekALeldPd 275 (277)
|.++.. +|++++|+.+|++++++.|+
T Consensus 162 g~~~~~-~g~~~~A~~~~~~al~~~~~ 187 (307)
T 2ifu_A 162 SRLLVR-QQKFDEAAASLQKEKSMYKE 187 (307)
T ss_dssp HHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH-cCCHHHHHHHHHHHHHHHHH
Confidence 999999 99999999999999998654
No 145
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.93 E-value=1.9e-09 Score=95.19 Aligned_cols=94 Identities=12% Similarity=0.075 Sum_probs=79.6
Q ss_pred hHHHHHHhCCCcHHHHHHHHHHHHh-------CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHH
Q 023753 178 SNNNYSNNNHGSSSTDAYYEKMIEA-------NPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSD------GNI 244 (277)
Q Consensus 178 yY~~m~e~~Gd~deAi~~yekALel-------dP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n------~~a 244 (277)
..+.++...+++++|+.+|++|++. .+..+.+++++|.+|. ..+++++|+.+|++|+++.+.. +.+
T Consensus 160 ~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~-~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~ 238 (293)
T 3u3w_A 160 AIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALY-LDSRYEESLYQVNKAIEISCRINSMALIGQL 238 (293)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTBCTTHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHcCcHHHHHHH
Confidence 3446677889999999999999953 1223468899999997 8999999999999999987654 789
Q ss_pred HHHHHHHHHHHcC-CHHHHHHHHHHHHHhC
Q 023753 245 LSLYADLIWQAHK-DASRAESYFDQAVKSA 273 (277)
Q Consensus 245 l~~LA~ll~~~~G-d~deAi~~yekALeld 273 (277)
++++|.++.. +| ++++|+.+|++|+.+.
T Consensus 239 ~~~lg~~~~~-~g~~~~~A~~~~~~Al~i~ 267 (293)
T 3u3w_A 239 YYQRGECLRK-LEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp HHHHHHHHHH-TTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-hCCcHHHHHHHHHHHHHHH
Confidence 9999999999 88 5799999999999763
No 146
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.93 E-value=3.1e-09 Score=86.28 Aligned_cols=91 Identities=10% Similarity=0.057 Sum_probs=67.4
Q ss_pred HHHHHhCCCcHHHHHHHHHHHH------hCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---CCCC----HHHHH
Q 023753 180 NNYSNNNHGSSSTDAYYEKMIE------ANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILA---NPSD----GNILS 246 (277)
Q Consensus 180 ~~m~e~~Gd~deAi~~yekALe------ldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALel---dP~n----~~al~ 246 (277)
..++...+++++|+.+|+++++ ..|..+.++.++|.++. ..|++++|+.+|++|+.+ .+++ ..++.
T Consensus 33 ~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 111 (203)
T 3gw4_A 33 GYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVER-MAGNWDAARRCFLEERELLASLPEDPLAASANAY 111 (203)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHH
T ss_pred HHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHH
Confidence 3555567888888888888888 44455677788887776 678888888888888887 3422 45677
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh
Q 023753 247 LYADLIWQAHKDASRAESYFDQAVKS 272 (277)
Q Consensus 247 ~LA~ll~~~~Gd~deAi~~yekALel 272 (277)
++|.+++. .|++++|+.+|++++++
T Consensus 112 ~lg~~~~~-~g~~~~A~~~~~~al~~ 136 (203)
T 3gw4_A 112 EVATVALH-FGDLAGARQEYEKSLVY 136 (203)
T ss_dssp HHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-hCCHHHHHHHHHHHHHH
Confidence 78888887 88888888888888765
No 147
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.93 E-value=4.3e-09 Score=89.08 Aligned_cols=87 Identities=14% Similarity=0.092 Sum_probs=80.4
Q ss_pred CcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHhC-C-CCHHHHHHHHHHHHHHcCCHHHH
Q 023753 188 GSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRG---DFAKAEELCGRAILAN-P-SDGNILSLYADLIWQAHKDASRA 262 (277)
Q Consensus 188 d~deAi~~yekALeldP~n~~al~nLA~lL~e~~G---d~eeA~e~~ekALeld-P-~n~~al~~LA~ll~~~~Gd~deA 262 (277)
....+...|.++++.+|.+..+.++||++|. ... ++++|+.+|+.+++.+ | ++.+++|++|..++. .++|++|
T Consensus 13 ~l~~~~~~y~~e~~~~~~~~~~~F~ya~~Lv-~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~k-l~~Y~~A 90 (152)
T 1pc2_A 13 DLLKFEKKFQSEKAAGSVSKSTQFEYAWCLV-RSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYR-LKEYEKA 90 (152)
T ss_dssp HHHHHHHHHHHHHHTTCCCHHHHHHHHHHHH-TCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHH-TSCHHHH
T ss_pred HHHHHHHHHHHHHccCCCcHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHH-ccCHHHH
Confidence 4568899999999999999999999999997 666 7789999999999999 7 678999999999999 9999999
Q ss_pred HHHHHHHHHhCCCC
Q 023753 263 ESYFDQAVKSAPDD 276 (277)
Q Consensus 263 i~~yekALeldPdD 276 (277)
+.+++++|+++|+|
T Consensus 91 ~~y~~~lL~ieP~n 104 (152)
T 1pc2_A 91 LKYVRGLLQTEPQN 104 (152)
T ss_dssp HHHHHHHHHHCTTC
T ss_pred HHHHHHHHhcCCCC
Confidence 99999999999987
No 148
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.92 E-value=3.9e-09 Score=93.76 Aligned_cols=93 Identities=8% Similarity=0.060 Sum_probs=83.3
Q ss_pred HHHHHhCCCcHHHHHHHHHHHHhCCCCH----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHHHHHHHH
Q 023753 180 NNYSNNNHGSSSTDAYYEKMIEANPGNA----LLLGNYARFLKEVRGDFAKAEELCGRAILA------NPSDGNILSLYA 249 (277)
Q Consensus 180 ~~m~e~~Gd~deAi~~yekALeldP~n~----~al~nLA~lL~e~~Gd~eeA~e~~ekALel------dP~n~~al~~LA 249 (277)
+..+...|++++|+.+|+++++++|+++ .++..+|.++. ..+++++|+.+|++|+.+ .|..+.++..+|
T Consensus 16 g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la 94 (406)
T 3sf4_A 16 GERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYF-YLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLG 94 (406)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHhccccHHHHHHHHHHH
Confidence 4566678999999999999999999995 67889999887 899999999999999988 455677899999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCC
Q 023753 250 DLIWQAHKDASRAESYFDQAVKSAP 274 (277)
Q Consensus 250 ~ll~~~~Gd~deAi~~yekALeldP 274 (277)
.++.. .|++++|+.+|++++++.|
T Consensus 95 ~~~~~-~g~~~~A~~~~~~al~~~~ 118 (406)
T 3sf4_A 95 NTLKV-LGNFDEAIVCCQRHLDISR 118 (406)
T ss_dssp HHHHH-TTCHHHHHHHHHHHHHHHH
T ss_pred HHHHH-cCCHHHHHHHHHHHHHHHH
Confidence 99999 9999999999999998765
No 149
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=98.91 E-value=3.5e-09 Score=101.06 Aligned_cols=83 Identities=10% Similarity=0.003 Sum_probs=72.4
Q ss_pred HHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 023753 181 NYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDAS 260 (277)
Q Consensus 181 ~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~d 260 (277)
..+...+++++|+.+|++||+++|+++.+++++|.+|. ..+++++|+.+|++|++++|++..++..++.++.. .++++
T Consensus 325 ~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a~~-~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~-~~~~~ 402 (457)
T 1kt0_A 325 MCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQL-LMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKK-AKEHN 402 (457)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHTTC----CHHHHHHHHHHH-HHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHH-HccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-HHHHH
Confidence 45556789999999999999999999999999999997 89999999999999999999999999999999998 88888
Q ss_pred HHHHH
Q 023753 261 RAESY 265 (277)
Q Consensus 261 eAi~~ 265 (277)
+|...
T Consensus 403 ~a~~~ 407 (457)
T 1kt0_A 403 ERDRR 407 (457)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77643
No 150
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.91 E-value=7.2e-09 Score=91.40 Aligned_cols=93 Identities=15% Similarity=0.074 Sum_probs=80.6
Q ss_pred HHHHHHhCCCcHHHHHHHHHHH---HhCCCCH----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC------CHHHH
Q 023753 179 NNNYSNNNHGSSSTDAYYEKMI---EANPGNA----LLLGNYARFLKEVRGDFAKAEELCGRAILANPS------DGNIL 245 (277)
Q Consensus 179 Y~~m~e~~Gd~deAi~~yekAL---eldP~n~----~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~------n~~al 245 (277)
.+.++...+++++|+.+|++|+ +..|++. .+++++|.+|. ..+++++|+.+|++|+++.++ -+.++
T Consensus 161 lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~-~~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~ 239 (293)
T 2qfc_A 161 IANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALY-LDSRYEESLYQVNKAIEISCRINSMALIGQLY 239 (293)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTBCSSHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHH-HHhhHHHHHHHHHHHHHHHHhcCcHHHHHHHH
Confidence 3467777899999999999999 5677654 68999999997 899999999999999998643 27889
Q ss_pred HHHHHHHHHHcCCHHHH-HHHHHHHHHhC
Q 023753 246 SLYADLIWQAHKDASRA-ESYFDQAVKSA 273 (277)
Q Consensus 246 ~~LA~ll~~~~Gd~deA-i~~yekALeld 273 (277)
+++|.++.. .|++++| +.+|++|+.+.
T Consensus 240 ~~lg~~y~~-~g~~~~Ai~~~~~~Al~~~ 267 (293)
T 2qfc_A 240 YQRGECLRK-LEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp HHHHHHHHH-TTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-cCCcHHHHHHHHHHHHHHH
Confidence 999999999 9999999 88899998763
No 151
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.90 E-value=4.8e-09 Score=95.20 Aligned_cols=93 Identities=13% Similarity=0.090 Sum_probs=82.9
Q ss_pred HHHHHHhCCCcHHHHHHHHHHHHhCCCCH------HHHHHHHHHHHHHcCCHHHHHHHHHHHHH-----hC-CCCHHHHH
Q 023753 179 NNNYSNNNHGSSSTDAYYEKMIEANPGNA------LLLGNYARFLKEVRGDFAKAEELCGRAIL-----AN-PSDGNILS 246 (277)
Q Consensus 179 Y~~m~e~~Gd~deAi~~yekALeldP~n~------~al~nLA~lL~e~~Gd~eeA~e~~ekALe-----ld-P~n~~al~ 246 (277)
.+.++...+++++|+.+|++|+++.+... .++.++|.++. ..|++++|+.+|++|++ .+ |..+.++.
T Consensus 190 lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 268 (383)
T 3ulq_A 190 FATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKN-SQSQYEDAIPYFKRAIAVFEESNILPSLPQAYF 268 (383)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHhhccchhHHHHHH
Confidence 44667778999999999999999865443 58999999997 89999999999999999 56 88899999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 023753 247 LYADLIWQAHKDASRAESYFDQAVKSA 273 (277)
Q Consensus 247 ~LA~ll~~~~Gd~deAi~~yekALeld 273 (277)
++|.++.. .|++++|+.+|++|+++.
T Consensus 269 ~l~~~~~~-~g~~~~A~~~~~~al~~~ 294 (383)
T 3ulq_A 269 LITQIHYK-LGKIDKAHEYHSKGMAYS 294 (383)
T ss_dssp HHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-CCCHHHHHHHHHHHHHHH
Confidence 99999999 999999999999999874
No 152
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.89 E-value=1.2e-08 Score=74.72 Aligned_cols=69 Identities=17% Similarity=0.053 Sum_probs=64.9
Q ss_pred CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 023753 206 NALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 206 n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~deAi~~yekALeldPdD 276 (277)
.+.+++.+|..+. ..+++++|+.+|++++..+|+++.++..+|.+++. .+++++|+.+|+++++++|++
T Consensus 3 ~~~~~~~~~~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~~~~~ 71 (118)
T 1elw_A 3 QVNELKEKGNKAL-SVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAK-KGDYQKAYEDGCKTVDLKPDW 71 (118)
T ss_dssp HHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHCTTC
T ss_pred hHHHHHHHHHHHH-HcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHh-hccHHHHHHHHHHHHHhCccc
Confidence 4678899999887 89999999999999999999999999999999999 999999999999999999975
No 153
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.89 E-value=2.3e-08 Score=86.09 Aligned_cols=87 Identities=17% Similarity=0.201 Sum_probs=47.4
Q ss_pred HHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH--
Q 023753 181 NYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEV----RGDFAKAEELCGRAILANPSDGNILSLYADLIWQ-- 254 (277)
Q Consensus 181 ~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~----~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~-- 254 (277)
.++...+++++|+.+|+++++ |+++.+++++|.++. . .+++++|+.+|++|++++ ++.+++.+|.++..
T Consensus 14 ~~~~~~~~~~~A~~~~~~a~~--~~~~~a~~~lg~~~~-~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~g~ 88 (273)
T 1ouv_A 14 AKSYKEKDFTQAKKYFEKACD--LKENSGCFNLGVLYY-QGQGVEKNLKKAASFYAKACDLN--YSNGCHLLGNLYYSGQ 88 (273)
T ss_dssp HHHHHTTCHHHHHHHHHHHHH--TTCHHHHHHHHHHHH-HTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTS
T ss_pred HHHHhCCCHHHHHHHHHHHHH--CCCHHHHHHHHHHHH-cCCCcCCCHHHHHHHHHHHHHCC--CHHHHHHHHHHHhCCC
Confidence 344444555555555555555 455555555555554 4 555555555555555553 55555555555542
Q ss_pred -HcCCHHHHHHHHHHHHHh
Q 023753 255 -AHKDASRAESYFDQAVKS 272 (277)
Q Consensus 255 -~~Gd~deAi~~yekALel 272 (277)
..+++++|+.+|++|++.
T Consensus 89 ~~~~~~~~A~~~~~~a~~~ 107 (273)
T 1ouv_A 89 GVSQNTNKALQYYSKACDL 107 (273)
T ss_dssp SSCCCHHHHHHHHHHHHHT
T ss_pred CcccCHHHHHHHHHHHHHc
Confidence 135555555555555544
No 154
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.89 E-value=2.2e-09 Score=94.74 Aligned_cols=92 Identities=10% Similarity=0.049 Sum_probs=76.4
Q ss_pred HHHHhCCCcHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-------CCCCHHHHHH
Q 023753 181 NYSNNNHGSSSTDAYYEKMIEANPGN------ALLLGNYARFLKEVRGDFAKAEELCGRAILA-------NPSDGNILSL 247 (277)
Q Consensus 181 ~m~e~~Gd~deAi~~yekALeldP~n------~~al~nLA~lL~e~~Gd~eeA~e~~ekALel-------dP~n~~al~~ 247 (277)
..+...+++++|+.+|++|+++.+.. ..+++++|.++. ..+++++|+.+|++|+++ .+..+.++++
T Consensus 123 ~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~n 201 (293)
T 3u3w_A 123 AYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYA-ENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYN 201 (293)
T ss_dssp HHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHH
T ss_pred HHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHH
Confidence 33445579999999999999975543 347899999997 899999999999999953 2234557899
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 023753 248 YADLIWQAHKDASRAESYFDQAVKSAP 274 (277)
Q Consensus 248 LA~ll~~~~Gd~deAi~~yekALeldP 274 (277)
+|.+|.. ++++++|+.+|++|+++.+
T Consensus 202 lg~~y~~-~~~y~~A~~~~~~al~~~~ 227 (293)
T 3u3w_A 202 HAKALYL-DSRYEESLYQVNKAIEISC 227 (293)
T ss_dssp HHHHHHH-TTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-HhHHHHHHHHHHHHHHHHH
Confidence 9999999 9999999999999998764
No 155
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.89 E-value=8e-09 Score=87.81 Aligned_cols=87 Identities=9% Similarity=-0.023 Sum_probs=75.3
Q ss_pred CCCcHHHHHHHHHHHHhCC--CCHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC--
Q 023753 186 NHGSSSTDAYYEKMIEANP--GNALLLGNYARFLKEV----RGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHK-- 257 (277)
Q Consensus 186 ~Gd~deAi~~yekALeldP--~n~~al~nLA~lL~e~----~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~G-- 257 (277)
.+++++|+.+|++|++.+| +++.++++||.+|. . .+++++|+.+|++|+++ |.++.+++++|.+|....+
T Consensus 102 ~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~-~g~g~~~d~~~A~~~~~~A~~~-~~~~~a~~~Lg~~y~~g~gg~ 179 (212)
T 3rjv_A 102 ATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYA-SGVHGPEDDVKASEYFKGSSSL-SRTGYAEYWAGMMFQQGEKGF 179 (212)
T ss_dssp SCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHH-HTSSSSCCHHHHHHHHHHHHHT-SCTTHHHHHHHHHHHHCBTTT
T ss_pred ccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHcCCCCC
Confidence 6789999999999999988 45899999999886 6 67999999999999998 7788899999999987223
Q ss_pred ---CHHHHHHHHHHHHHhCC
Q 023753 258 ---DASRAESYFDQAVKSAP 274 (277)
Q Consensus 258 ---d~deAi~~yekALeldP 274 (277)
++++|+.+|++|++...
T Consensus 180 ~~~d~~~A~~~~~~A~~~g~ 199 (212)
T 3rjv_A 180 IEPNKQKALHWLNVSCLEGF 199 (212)
T ss_dssp BCCCHHHHHHHHHHHHHHTC
T ss_pred CCCCHHHHHHHHHHHHHcCC
Confidence 89999999999998753
No 156
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.88 E-value=1.6e-08 Score=93.54 Aligned_cols=97 Identities=14% Similarity=0.044 Sum_probs=87.8
Q ss_pred hHHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHhCCCCHHHHHHHHHHH---
Q 023753 178 SNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRG--DFAKAEELCGRAILANPSDGNILSLYADLI--- 252 (277)
Q Consensus 178 yY~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~G--d~eeA~e~~ekALeldP~n~~al~~LA~ll--- 252 (277)
|++.++......++|+.++.++|+++|++..+|+..+.++. ..+ ++++|++++++++.++|.+..+|++.+.++
T Consensus 38 ~~~a~~~~~e~s~~aL~~t~~~L~~nP~~~taWn~R~~~L~-~l~~~~~~eeL~~~~~~L~~nPk~y~aW~~R~~iL~~~ 116 (306)
T 3dra_A 38 LLLALMKAEEYSERALHITELGINELASHYTIWIYRFNILK-NLPNRNLYDELDWCEEIALDNEKNYQIWNYRQLIIGQI 116 (306)
T ss_dssp HHHHHHHTTCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-TCTTSCHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHCcHHHHHHHHHHHHHH-HcccccHHHHHHHHHHHHHHCcccHHHHHHHHHHHHHH
Confidence 55555666666689999999999999999999999999987 677 999999999999999999999999999998
Q ss_pred -HHHc---CCHHHHHHHHHHHHHhCCCC
Q 023753 253 -WQAH---KDASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 253 -~~~~---Gd~deAi~~yekALeldPdD 276 (277)
.. . +++++++.+++++++.+|.|
T Consensus 117 ~~~-l~~~~~~~~EL~~~~~~l~~~pkn 143 (306)
T 3dra_A 117 MEL-NNNDFDPYREFDILEAMLSSDPKN 143 (306)
T ss_dssp HHH-TTTCCCTHHHHHHHHHHHHHCTTC
T ss_pred HHh-ccccCCHHHHHHHHHHHHHhCCCC
Confidence 55 5 78999999999999999987
No 157
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.88 E-value=9.7e-09 Score=78.90 Aligned_cols=74 Identities=16% Similarity=0.103 Sum_probs=69.5
Q ss_pred HhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 023753 201 EANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSD---GNILSLYADLIWQAHKDASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 201 eldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n---~~al~~LA~ll~~~~Gd~deAi~~yekALeldPdD 276 (277)
..+|.++..++.+|..+. ..+++++|+.+|+++++++|++ ..++..+|.++.. .+++++|+.+|+++++++|++
T Consensus 22 ~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~~~~~ 98 (148)
T 2dba_A 22 TPGASSVEQLRKEGNELF-KCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLK-LEDYDKAETEASKAIEKDGGD 98 (148)
T ss_dssp CTTCCCHHHHHHHHHHHH-TTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHTSCC
T ss_pred ccchHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHH-HccHHHHHHHHHHHHhhCccC
Confidence 457889999999999887 8999999999999999999998 8999999999999 999999999999999999976
No 158
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=98.88 E-value=3.8e-09 Score=84.86 Aligned_cols=73 Identities=11% Similarity=-0.025 Sum_probs=65.9
Q ss_pred HHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH-HHHHHHHHHHHH
Q 023753 181 NYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDG-NILSLYADLIWQ 254 (277)
Q Consensus 181 ~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~-~al~~LA~ll~~ 254 (277)
..+...+++++|+.+|++||+++|+++.+++++|.++. ..|++++|+.+|++|++++|+++ .+...++.+...
T Consensus 71 ~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~-~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~~ 144 (162)
T 3rkv_A 71 QCYLNIGDLHEAEETSSEVLKREETNEKALFRRAKARI-AAWKLDEAEEDLKLLLRNHPAAASVVAREMKIVTER 144 (162)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHH
T ss_pred HHHHhcCcHHHHHHHHHHHHhcCCcchHHHHHHHHHHH-HHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 55666799999999999999999999999999999997 89999999999999999999999 667777776655
No 159
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.86 E-value=9.6e-09 Score=96.01 Aligned_cols=81 Identities=15% Similarity=0.028 Sum_probs=74.6
Q ss_pred HHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHH
Q 023753 183 SNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRA 262 (277)
Q Consensus 183 ~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~deA 262 (277)
+...+++++|+.+|++||+++|+++.+++++|.+|. ..+++++|+.+|++|++++|+++.++..++.++.. .+++++|
T Consensus 283 ~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~-~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~-~~~~~~a 360 (370)
T 1ihg_A 283 KLKMSDWQGAVDSCLEALEIDPSNTKALYRRAQGWQ-GLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQK-IKAQKDK 360 (370)
T ss_dssp HHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HHHHHHH
T ss_pred HHhccCHHHHHHHHHHHHHhCchhHHHHHHHHHHHH-HccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-HHHHHHH
Confidence 445789999999999999999999999999999997 89999999999999999999999999999999988 8888877
Q ss_pred HHH
Q 023753 263 ESY 265 (277)
Q Consensus 263 i~~ 265 (277)
...
T Consensus 361 ~k~ 363 (370)
T 1ihg_A 361 EKA 363 (370)
T ss_dssp HHC
T ss_pred HHH
Confidence 654
No 160
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.85 E-value=1.3e-08 Score=97.15 Aligned_cols=89 Identities=18% Similarity=0.240 Sum_probs=76.5
Q ss_pred CCCcH-------HHHHHHHHHHH-hCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH-HHHHHHHHHHHHHc
Q 023753 186 NHGSS-------STDAYYEKMIE-ANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDG-NILSLYADLIWQAH 256 (277)
Q Consensus 186 ~Gd~d-------eAi~~yekALe-ldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~-~al~~LA~ll~~~~ 256 (277)
.|+++ +|+..|++|++ ++|++..+|..++.++. ..|++++|+..|++|++++|.++ .+|..++.++.. .
T Consensus 292 ~g~~~~a~~~~~~A~~~~~~Al~~~~p~~~~l~~~~~~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~-~ 369 (530)
T 2ooe_A 292 KGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEE-SRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARR-A 369 (530)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHTTTTCSSCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHH-H
T ss_pred ccchhhhhhhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHH-hcCCHHHHHHHHHHHhCccccCchHHHHHHHHHHHH-h
Confidence 58877 89999999997 89999999999998885 78999999999999999999986 588888888877 7
Q ss_pred CCHHHHHHHHHHHHHhCCCC
Q 023753 257 KDASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 257 Gd~deAi~~yekALeldPdD 276 (277)
+++++|+.+|++|++..|.+
T Consensus 370 ~~~~~A~~~~~~Al~~~~~~ 389 (530)
T 2ooe_A 370 EGIKSGRMIFKKAREDARTR 389 (530)
T ss_dssp HHHHHHHHHHHHHHTCTTCC
T ss_pred cCHHHHHHHHHHHHhccCCc
Confidence 88888888888888776653
No 161
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.85 E-value=3.9e-08 Score=84.62 Aligned_cols=83 Identities=13% Similarity=0.119 Sum_probs=44.8
Q ss_pred CCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH---HcCC
Q 023753 186 NHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEV----RGDFAKAEELCGRAILANPSDGNILSLYADLIWQ---AHKD 258 (277)
Q Consensus 186 ~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~----~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~---~~Gd 258 (277)
.+++++|+.+|++|++++ ++.+++++|.++. . .+++++|+.+|++|++.+ ++.+++++|.++.. ..++
T Consensus 55 ~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~-~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~~ 129 (273)
T 1ouv_A 55 EKNLKKAASFYAKACDLN--YSNGCHLLGNLYY-SGQGVSQNTNKALQYYSKACDLK--YAEGCASLGGIYHDGKVVTRD 129 (273)
T ss_dssp CCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHH-HTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHCSSSCCC
T ss_pred CCCHHHHHHHHHHHHHCC--CHHHHHHHHHHHh-CCCCcccCHHHHHHHHHHHHHcC--CccHHHHHHHHHHcCCCcccC
Confidence 455555555555555553 4555555555554 4 555555555555555542 55555555555542 1355
Q ss_pred HHHHHHHHHHHHHhC
Q 023753 259 ASRAESYFDQAVKSA 273 (277)
Q Consensus 259 ~deAi~~yekALeld 273 (277)
+++|+.+|++|++.+
T Consensus 130 ~~~A~~~~~~a~~~~ 144 (273)
T 1ouv_A 130 FKKAVEYFTKACDLN 144 (273)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhcC
Confidence 555555555555543
No 162
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.85 E-value=2e-08 Score=99.48 Aligned_cols=87 Identities=13% Similarity=0.055 Sum_probs=53.4
Q ss_pred CcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC
Q 023753 188 GSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGD----------FAKAEELCGRAILANPSDGNILSLYADLIWQAHK 257 (277)
Q Consensus 188 d~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd----------~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~G 257 (277)
..++|++++.+||+++|++..+|+..+.++. ..++ +++|++++++|++.+|++..+|++.++++.. .+
T Consensus 44 ~~eeal~~~~~~l~~nP~~~taW~~R~~~l~-~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~~-l~ 121 (567)
T 1dce_A 44 LDESVLELTSQILGANPDFATLWNCRREVLQ-HLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSR-LP 121 (567)
T ss_dssp CSHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT-CS
T ss_pred CCHHHHHHHHHHHHHCchhHHHHHHHHHHHH-hcccccchhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cc
Confidence 3445566666666666666666666666554 3444 6666666666666666666666666666655 55
Q ss_pred --CHHHHHHHHHHHHHhCCCC
Q 023753 258 --DASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 258 --d~deAi~~yekALeldPdD 276 (277)
++++|+++++++++++|.|
T Consensus 122 ~~~~~~el~~~~k~l~~d~~N 142 (567)
T 1dce_A 122 EPNWARELELCARFLEADERN 142 (567)
T ss_dssp SCCHHHHHHHHHHHHHHCTTC
T ss_pred cccHHHHHHHHHHHHhhcccc
Confidence 4466666666666666654
No 163
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.84 E-value=9.1e-09 Score=93.58 Aligned_cols=96 Identities=14% Similarity=0.015 Sum_probs=84.7
Q ss_pred hHHHHHHhCCCcHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-----hCCCCHHHHH
Q 023753 178 SNNNYSNNNHGSSSTDAYYEKMIEANPG------NALLLGNYARFLKEVRGDFAKAEELCGRAIL-----ANPSDGNILS 246 (277)
Q Consensus 178 yY~~m~e~~Gd~deAi~~yekALeldP~------n~~al~nLA~lL~e~~Gd~eeA~e~~ekALe-----ldP~n~~al~ 246 (277)
..+.++...+++++|+.+|++|+++.+. ...++.++|.++. ..+++++|+.+|++|+. .+|..+.++.
T Consensus 187 ~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~-~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 265 (378)
T 3q15_A 187 VIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYD-RSGDDQMAVEHFQKAAKVSREKVPDLLPKVLF 265 (378)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHHCGGGHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHhhCChhHHHHHH
Confidence 4456777889999999999999997431 2468899999997 89999999999999999 8888899999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 023753 247 LYADLIWQAHKDASRAESYFDQAVKSAPD 275 (277)
Q Consensus 247 ~LA~ll~~~~Gd~deAi~~yekALeldPd 275 (277)
++|.++.. .|++++|+.+|++|+++.+.
T Consensus 266 ~la~~~~~-~g~~~~A~~~~~~al~~~~~ 293 (378)
T 3q15_A 266 GLSWTLCK-AGQTQKAFQFIEEGLDHITA 293 (378)
T ss_dssp HHHHHHHH-TTCHHHHHHHHHHHHHHCCT
T ss_pred HHHHHHHH-CCCHHHHHHHHHHHHHHHHH
Confidence 99999999 99999999999999998654
No 164
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.84 E-value=7.4e-09 Score=77.27 Aligned_cols=70 Identities=14% Similarity=0.197 Sum_probs=64.6
Q ss_pred CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 023753 205 GNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 205 ~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~deAi~~yekALeldPdD 276 (277)
..+.+++.+|.++. ..+++++|+.+|++++..+|.++.++..+|.++.. .+++++|+.+|++++++.|++
T Consensus 2 ~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~~~~~~ 71 (131)
T 1elr_A 2 KQALKEKELGNDAY-KKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFE-KGDYNKCRELCEKAIEVGREN 71 (131)
T ss_dssp HHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHHS
T ss_pred hHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHH-hccHHHHHHHHHHHHhhcccc
Confidence 34678899999887 79999999999999999999999999999999999 999999999999999997753
No 165
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.83 E-value=1.5e-08 Score=96.59 Aligned_cols=97 Identities=14% Similarity=0.207 Sum_probs=57.4
Q ss_pred hHHHHHHhCCCcHHHHHHHHHHHHhCCCCH-HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc
Q 023753 178 SNNNYSNNNHGSSSTDAYYEKMIEANPGNA-LLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAH 256 (277)
Q Consensus 178 yY~~m~e~~Gd~deAi~~yekALeldP~n~-~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~ 256 (277)
.|..++...|++++|+..|+++++++|.++ .+|.+++.++. ..+++++|+.+|++|++..|.+..++...+.+.+...
T Consensus 326 ~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~Al~~~~~~~~~~~~~a~~~~~~~ 404 (530)
T 2ooe_A 326 AYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFAR-RAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCS 404 (530)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHTCTTCCTHHHHHHHHHHHHHT
T ss_pred HHHHHHHhcCCHHHHHHHHHHHhCccccCchHHHHHHHHHHH-HhcCHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHc
Confidence 445667778999999999999999999986 58888887654 3444444444444444444443333333333322113
Q ss_pred CCHHHHHHHHHHHHHhCCC
Q 023753 257 KDASRAESYFDQAVKSAPD 275 (277)
Q Consensus 257 Gd~deAi~~yekALeldPd 275 (277)
|++++|+.+|++|++.+|+
T Consensus 405 ~~~~~A~~~~e~al~~~p~ 423 (530)
T 2ooe_A 405 KDKSVAFKIFELGLKKYGD 423 (530)
T ss_dssp CCHHHHHHHHHHHHHHHTT
T ss_pred CChhHHHHHHHHHHHHCCC
Confidence 4444444444444444443
No 166
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.83 E-value=3.4e-09 Score=96.17 Aligned_cols=92 Identities=15% Similarity=0.018 Sum_probs=71.4
Q ss_pred HHHHhCCCcHHHHHHHHHHHHh---CC---CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-------CHHHHHH
Q 023753 181 NYSNNNHGSSSTDAYYEKMIEA---NP---GNALLLGNYARFLKEVRGDFAKAEELCGRAILANPS-------DGNILSL 247 (277)
Q Consensus 181 ~m~e~~Gd~deAi~~yekALel---dP---~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~-------n~~al~~ 247 (277)
..+...+++++|+.+|++|+++ .+ ..+.+++++|.++. ..+++++|+.+|++|+++.+. .+.++.+
T Consensus 111 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~ 189 (383)
T 3ulq_A 111 MYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYY-YMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSL 189 (383)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHH
Confidence 4455678889999999998887 22 34578888888886 788888888888888887443 3457888
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 023753 248 YADLIWQAHKDASRAESYFDQAVKSAP 274 (277)
Q Consensus 248 LA~ll~~~~Gd~deAi~~yekALeldP 274 (277)
+|.++.. .|++++|+.+|++|+++.|
T Consensus 190 lg~~~~~-~g~~~~A~~~~~~al~~~~ 215 (383)
T 3ulq_A 190 FATNFLD-LKQYEDAISHFQKAYSMAE 215 (383)
T ss_dssp HHHHHHH-TTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-hcCHHHHHHHHHHHHHHHH
Confidence 8888888 8888888888888887644
No 167
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.82 E-value=1.1e-08 Score=95.22 Aligned_cols=88 Identities=14% Similarity=0.181 Sum_probs=79.6
Q ss_pred CCcHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHH-----cCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHHHcCC
Q 023753 187 HGSSSTDAYYEKMIEANPG--NALLLGNYARFLKEV-----RGDFAKAEELCGRAILANPSD-GNILSLYADLIWQAHKD 258 (277)
Q Consensus 187 Gd~deAi~~yekALeldP~--n~~al~nLA~lL~e~-----~Gd~eeA~e~~ekALeldP~n-~~al~~LA~ll~~~~Gd 258 (277)
....+|...+++||++||+ +..+|..+|.+|. . .|+.++|+++|++|++++|+. ..+++.+|..+....++
T Consensus 177 ~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~-~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd 255 (301)
T 3u64_A 177 DTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYA-AAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNN 255 (301)
T ss_dssp HHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHH-HSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTC
T ss_pred HhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHH-hCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCC
Confidence 4567999999999999999 6779999999886 5 499999999999999999975 99999999999873499
Q ss_pred HHHHHHHHHHHHHhCCC
Q 023753 259 ASRAESYFDQAVKSAPD 275 (277)
Q Consensus 259 ~deAi~~yekALeldPd 275 (277)
+++|..++++|++.+|.
T Consensus 256 ~~~a~~~L~kAL~a~p~ 272 (301)
T 3u64_A 256 RAGFDEALDRALAIDPE 272 (301)
T ss_dssp HHHHHHHHHHHHHCCGG
T ss_pred HHHHHHHHHHHHcCCCC
Confidence 99999999999999886
No 168
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.82 E-value=8.6e-09 Score=87.91 Aligned_cols=95 Identities=11% Similarity=0.022 Sum_probs=75.4
Q ss_pred HHHHHHhCCCcHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHH
Q 023753 179 NNNYSNNNHGSSSTDAYYEKMIEANPGN------ALLLGNYARFLKEVRGDFAKAEELCGRAILANPSD------GNILS 246 (277)
Q Consensus 179 Y~~m~e~~Gd~deAi~~yekALeldP~n------~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n------~~al~ 246 (277)
...++...+++++|+.+|++++++.+.. ..++..+|.++. ..|++++|+.+|++|+.+.+.. ..++.
T Consensus 229 l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~ 307 (338)
T 3ro2_A 229 LGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYT-LLQDYEKAIDYHLKHLAIAQELKDRIGEGRACW 307 (338)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHhcCCcHHHHHHHH
Confidence 3455666788999999999998887665 677888888886 7899999999999998886543 55788
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 023753 247 LYADLIWQAHKDASRAESYFDQAVKSAPD 275 (277)
Q Consensus 247 ~LA~ll~~~~Gd~deAi~~yekALeldPd 275 (277)
.+|.++.. .|++++|+.+|++++++.+.
T Consensus 308 ~la~~~~~-~g~~~~A~~~~~~a~~~~~~ 335 (338)
T 3ro2_A 308 SLGNAYTA-LGNHDQAMHFAEKHLEISRE 335 (338)
T ss_dssp HHHHHHHH-HTCHHHHHHHHHHHHHC---
T ss_pred HHHHHHHH-cCChHHHHHHHHHHHHHHHh
Confidence 88998888 89999999999999988764
No 169
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.81 E-value=1.4e-08 Score=90.09 Aligned_cols=94 Identities=11% Similarity=0.019 Sum_probs=78.1
Q ss_pred hHHHHHHhCCCcHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHH
Q 023753 178 SNNNYSNNNHGSSSTDAYYEKMIEANPGN------ALLLGNYARFLKEVRGDFAKAEELCGRAILANPSD------GNIL 245 (277)
Q Consensus 178 yY~~m~e~~Gd~deAi~~yekALeldP~n------~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n------~~al 245 (277)
....++...+++++|+.+|++++++.|.. ..++.++|.++. ..|++++|+.+|++|+++.+.. +.++
T Consensus 232 ~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~ 310 (406)
T 3sf4_A 232 NLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYT-LLQDYEKAIDYHLKHLAIAQELNDRIGEGRAC 310 (406)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHcCChHHHHHHHHHHHHHHHhCcCchHHHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHhcCCcHHHHHHH
Confidence 34466667889999999999999887766 678888998886 7899999999999999886544 6678
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 023753 246 SLYADLIWQAHKDASRAESYFDQAVKSA 273 (277)
Q Consensus 246 ~~LA~ll~~~~Gd~deAi~~yekALeld 273 (277)
..+|.++.. .|++++|+.+|++|+++.
T Consensus 311 ~~la~~~~~-~g~~~~A~~~~~~al~~~ 337 (406)
T 3sf4_A 311 WSLGNAYTA-LGNHDQAMHFAEKHLEIS 337 (406)
T ss_dssp HHHHHHHHH-HTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-cCCHHHHHHHHHHHHHHH
Confidence 889999988 899999999999998774
No 170
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.80 E-value=1.8e-08 Score=99.86 Aligned_cols=86 Identities=14% Similarity=0.151 Sum_probs=82.6
Q ss_pred cHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC-CHHHHHHH
Q 023753 189 SSSTDAYYEKMIEANPGNALLLGNYARFLKEVRG--DFAKAEELCGRAILANPSDGNILSLYADLIWQAHK-DASRAESY 265 (277)
Q Consensus 189 ~deAi~~yekALeldP~n~~al~nLA~lL~e~~G--d~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~G-d~deAi~~ 265 (277)
+++|+++|++|++.+|.+..+|++.++++. ..+ ++++|++++++|++++|+|..+|.+.+.++.. .+ .+++|+++
T Consensus 89 ~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~-~l~~~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~-l~~~~~~el~~ 166 (567)
T 1dce_A 89 VKAELGFLESCLRVNPKSYGTWHHRCWLLS-RLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQ-AAVAPAEELAF 166 (567)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-TCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcccccHHHHHHHHHHHHhhccccccHHHHHHHHHHH-cCCChHHHHHH
Confidence 899999999999999999999999999996 788 77999999999999999999999999999998 88 99999999
Q ss_pred HHHHHHhCCCC
Q 023753 266 FDQAVKSAPDD 276 (277)
Q Consensus 266 yekALeldPdD 276 (277)
++++|+.+|.|
T Consensus 167 ~~~~I~~~p~n 177 (567)
T 1dce_A 167 TDSLITRNFSN 177 (567)
T ss_dssp HHTTTTTTCCC
T ss_pred HHHHHHHCCCC
Confidence 99999999987
No 171
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=98.80 E-value=7e-09 Score=88.15 Aligned_cols=60 Identities=12% Similarity=0.125 Sum_probs=53.3
Q ss_pred cHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc-----------CCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 023753 189 SSSTDAYYEKMIEANPGNALLLGNYARFLKEVR-----------GDFAKAEELCGRAILANPSDGNILSLYA 249 (277)
Q Consensus 189 ~deAi~~yekALeldP~n~~al~nLA~lL~e~~-----------Gd~eeA~e~~ekALeldP~n~~al~~LA 249 (277)
+++|+..|++||+++|+++.+|+++|.+|. .. +++++|+++|++|++++|++..+...+.
T Consensus 62 ~~eAi~~le~AL~ldP~~~~A~~~LG~ay~-~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~~al~ 132 (158)
T 1zu2_A 62 IQEAITKFEEALLIDPKKDEAVWCIGNAYT-SFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLE 132 (158)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcCcHHHHHHHHHHHH-HhcccCcchhhhhccHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 569999999999999999999999999997 44 4899999999999999999986655443
No 172
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.79 E-value=3.6e-08 Score=93.20 Aligned_cols=97 Identities=11% Similarity=0.082 Sum_probs=88.9
Q ss_pred hHHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc
Q 023753 178 SNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRG-DFAKAEELCGRAILANPSDGNILSLYADLIWQAH 256 (277)
Q Consensus 178 yY~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~G-d~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~ 256 (277)
|++.++......++|++++.++|++||++..+|+..+.++. ..+ ++++|++++++++..+|++..+|++.+.++.. .
T Consensus 59 ~~r~~~~~~e~se~AL~lt~~~L~~nP~~ytaWn~R~~iL~-~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~-l 136 (349)
T 3q7a_A 59 YFRAIAAKEEKSERALELTEIIVRMNPAHYTVWQYRFSLLT-SLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDR-I 136 (349)
T ss_dssp HHHHHHHTTCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHH-H
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHhCchhHHHHHHHHHHHH-HhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-h
Confidence 55666666777789999999999999999999999999986 677 69999999999999999999999999999988 5
Q ss_pred -C-CHHHHHHHHHHHHHhCCCC
Q 023753 257 -K-DASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 257 -G-d~deAi~~yekALeldPdD 276 (277)
+ ++++++++++++++++|.|
T Consensus 137 ~~~~~~~EL~~~~k~L~~dpkN 158 (349)
T 3q7a_A 137 SPQDPVSEIEYIHGSLLPDPKN 158 (349)
T ss_dssp CCSCCHHHHHHHHHHTSSCTTC
T ss_pred cCCChHHHHHHHHHHHHhCCCC
Confidence 7 8999999999999999987
No 173
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.79 E-value=2.2e-08 Score=88.99 Aligned_cols=71 Identities=20% Similarity=0.118 Sum_probs=68.1
Q ss_pred CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 023753 204 PGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 204 P~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~deAi~~yekALeldPdD 276 (277)
|.++.+++.+|..+. ..|++++|+.+|++|++++|+++.+++++|.++.. .+++++|+.+|++|++++|++
T Consensus 1 p~~a~~~~~~g~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~-~~~~~~A~~~~~~al~~~p~~ 71 (281)
T 2c2l_A 1 SPSAQELKEQGNRLF-VGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLK-MQQPEQALADCRRALELDGQS 71 (281)
T ss_dssp CCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHH-TTCHHHHHHHHHHHTTSCTTC
T ss_pred ChhHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHhCCCC
Confidence 678899999999997 89999999999999999999999999999999999 999999999999999999986
No 174
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.78 E-value=1.7e-08 Score=81.81 Aligned_cols=93 Identities=15% Similarity=0.055 Sum_probs=77.4
Q ss_pred HHHHHHhCCCcHHHHHHHHHHHHh---CCCC----HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--CC----HHHH
Q 023753 179 NNNYSNNNHGSSSTDAYYEKMIEA---NPGN----ALLLGNYARFLKEVRGDFAKAEELCGRAILANP--SD----GNIL 245 (277)
Q Consensus 179 Y~~m~e~~Gd~deAi~~yekALel---dP~n----~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP--~n----~~al 245 (277)
...++...|++++|+.+|++++++ .+++ ..++.++|.++. ..|++++|+.+|++++.+.+ .+ ..++
T Consensus 72 l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 150 (203)
T 3gw4_A 72 VGMVERMAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVAL-HFGDLAGARQEYEKSLVYAQQADDQVAIACAF 150 (203)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHhccchHHHHHHH
Confidence 345667789999999999999998 4433 567899999887 79999999999999997643 23 2346
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 023753 246 SLYADLIWQAHKDASRAESYFDQAVKSA 273 (277)
Q Consensus 246 ~~LA~ll~~~~Gd~deAi~~yekALeld 273 (277)
.++|.++.. .|++++|+.+|++|+++.
T Consensus 151 ~~la~~~~~-~g~~~~A~~~~~~al~~~ 177 (203)
T 3gw4_A 151 RGLGDLAQQ-EKNLLEAQQHWLRARDIF 177 (203)
T ss_dssp HHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-CcCHHHHHHHHHHHHHHH
Confidence 889999999 999999999999999863
No 175
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.78 E-value=3.5e-08 Score=74.28 Aligned_cols=75 Identities=13% Similarity=0.097 Sum_probs=63.1
Q ss_pred HHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHH
Q 023753 179 NNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPS--DGNILSLYADLIWQ 254 (277)
Q Consensus 179 Y~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~--n~~al~~LA~ll~~ 254 (277)
++.++...+++++|+.+|+++++++|+++.+|+++|.++. ..|++++|+++|++|+++.|. +..+...+..++..
T Consensus 13 lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~-~~g~~~~A~~~~~~al~l~~~~~~~~~~~~l~~~l~~ 89 (100)
T 3ma5_A 13 LAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYE-RLDRTDDAIDTYAQGIEVAREEGTQKDLSELQDAKLK 89 (100)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhhhhcCCchhHHHHHHHHHHH
Confidence 4467777899999999999999999999999999999997 899999999999999999774 44455555554433
No 176
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.78 E-value=4.1e-08 Score=93.75 Aligned_cols=102 Identities=10% Similarity=0.011 Sum_probs=81.7
Q ss_pred CcchhhHHHHHHh----CCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHH-------------------------------
Q 023753 173 SGFSGSNNNYSNN----NHGSSSTDAYYEKMIEANPGNALLLGNYARFL------------------------------- 217 (277)
Q Consensus 173 ~~~~~yY~~m~e~----~Gd~deAi~~yekALeldP~n~~al~nLA~lL------------------------------- 217 (277)
++++.|++..... ..++.+|+.+|++|+++||+++.++..++.++
T Consensus 195 ~Aydl~Lra~~~l~~~~~~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~~~~~ 274 (372)
T 3ly7_A 195 ALLTNFYQAHDYLLHGDDKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPELN 274 (372)
T ss_dssp GGHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCGGGT
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHhcccCC
Confidence 4566677643332 24567999999999999999988777544322
Q ss_pred ------------HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 023753 218 ------------KEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 218 ------------~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~deAi~~yekALeldPdD 276 (277)
....|++++|+.++++|+.++|+ ..++..+|.++.. .|++++|++.|++|+.++|.+
T Consensus 275 ~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~-~G~~~eA~e~~~~AlrL~P~~ 343 (372)
T 3ly7_A 275 NLSIIYQIKAVSALVKGKTDESYQAINTGIDLEMS-WLNYVLLGKVYEM-KGMNREAADAYLTAFNLRPGA 343 (372)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHSCSH
T ss_pred cCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHH-CCCHHHHHHHHHHHHhcCCCc
Confidence 11368999999999999999974 7788889999988 999999999999999999963
No 177
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.78 E-value=6.6e-09 Score=93.62 Aligned_cols=94 Identities=11% Similarity=-0.049 Sum_probs=79.1
Q ss_pred HHHHHHhCCCcHHHHHHHHHHHHhCCCCHH------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHH
Q 023753 179 NNNYSNNNHGSSSTDAYYEKMIEANPGNAL------LLGNYARFLKEVRGDFAKAEELCGRAILANPSD------GNILS 246 (277)
Q Consensus 179 Y~~m~e~~Gd~deAi~~yekALeldP~n~~------al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n------~~al~ 246 (277)
...++...+++++|+.+|++++++.|.+.. ++.++|.++. ..+++++|+.+|++++.+.|.. ..++.
T Consensus 229 la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 307 (411)
T 4a1s_A 229 LGNTYYLLGDFQAAIEHHQERLRIAREFGDRAAERRANSNLGNSHI-FLGQFEDAAEHYKRTLALAVELGEREVEAQSCY 307 (411)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHcCChHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH-HCcCHHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 345666789999999999999998775433 7889998886 7899999999999999988754 67888
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 023753 247 LYADLIWQAHKDASRAESYFDQAVKSAP 274 (277)
Q Consensus 247 ~LA~ll~~~~Gd~deAi~~yekALeldP 274 (277)
.+|.++.. .|++++|+.+|++++++.+
T Consensus 308 ~la~~~~~-~g~~~~A~~~~~~al~~~~ 334 (411)
T 4a1s_A 308 SLGNTYTL-LHEFNTAIEYHNRHLAIAQ 334 (411)
T ss_dssp HHHHHHHH-TTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-cCCHHHHHHHHHHHHHHHH
Confidence 89999988 9999999999999988744
No 178
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.77 E-value=9.4e-08 Score=76.71 Aligned_cols=90 Identities=17% Similarity=0.121 Sum_probs=78.7
Q ss_pred HHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 023753 179 NNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEV----RGDFAKAEELCGRAILANPSDGNILSLYADLIWQ 254 (277)
Q Consensus 179 Y~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~----~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~ 254 (277)
+..++......++|+.+|++|.+. +++.+++++|.+|. . .+|+++|+.+|++|++. .++.+++++|.+|..
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~ 105 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYE-NGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYA 105 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHH-cCCCCCccHHHHHHHHHHHHcC--CCHHHHHHHHHHHHC
Confidence 556666667788899999999987 78999999999886 5 78999999999999987 789999999999876
Q ss_pred H---cCCHHHHHHHHHHHHHhC
Q 023753 255 A---HKDASRAESYFDQAVKSA 273 (277)
Q Consensus 255 ~---~Gd~deAi~~yekALeld 273 (277)
- .+|+++|+.+|++|.+..
T Consensus 106 G~g~~~d~~~A~~~~~~Aa~~g 127 (138)
T 1klx_A 106 GKGVVKNEKQAVKTFEKACRLG 127 (138)
T ss_dssp TSSSCCCHHHHHHHHHHHHHTT
T ss_pred CCCCCcCHHHHHHHHHHHHHCC
Confidence 2 479999999999999874
No 179
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=98.76 E-value=9.6e-08 Score=72.38 Aligned_cols=75 Identities=11% Similarity=-0.006 Sum_probs=66.6
Q ss_pred HHHHHHhCCCcHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 023753 179 NNNYSNNNHGSSSTDAYYEKMIEANPGN---ALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQ 254 (277)
Q Consensus 179 Y~~m~e~~Gd~deAi~~yekALeldP~n---~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~ 254 (277)
....+...+++++|+.+|+++++.+|++ +.+++++|.++. ..|++++|+.+|+++++..|+++.+......+...
T Consensus 45 lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~l~~l 122 (129)
T 2xev_A 45 LGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLGLSQY-GEGKNTEAQQTLQQVATQYPGSDAARVAQERLQSI 122 (129)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHH
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHCCCChHHHHHHHHHHHH
Confidence 4466777899999999999999999999 899999999997 89999999999999999999999887776665544
No 180
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=98.73 E-value=3.7e-08 Score=83.72 Aligned_cols=68 Identities=22% Similarity=0.203 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-------CHH-----HHHHHHHHHHHHcCCHHHHHHHHHHHHHh--
Q 023753 207 ALLLGNYARFLKEVRGDFAKAEELCGRAILANPS-------DGN-----ILSLYADLIWQAHKDASRAESYFDQAVKS-- 272 (277)
Q Consensus 207 ~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~-------n~~-----al~~LA~ll~~~~Gd~deAi~~yekALel-- 272 (277)
+..+.+.|..++ ..|+|++|+.+|++||+++|+ +.. +|.++|.++.. +|+|++|+.+|++||++
T Consensus 11 a~~~~~~G~~l~-~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~-Lgr~~eAl~~~~kAL~l~n 88 (159)
T 2hr2_A 11 AYLALSDAQRQL-VAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAG-LRSFDEALHSADKALHYFN 88 (159)
T ss_dssp HHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHhhh
Confidence 566889999887 899999999999999999999 544 99999999999 99999999999999999
Q ss_pred -----CCCC
Q 023753 273 -----APDD 276 (277)
Q Consensus 273 -----dPdD 276 (277)
+|++
T Consensus 89 ~~~e~~pd~ 97 (159)
T 2hr2_A 89 RRGELNQDE 97 (159)
T ss_dssp HHCCTTSTH
T ss_pred ccccCCCch
Confidence 9975
No 181
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.73 E-value=2.6e-08 Score=84.66 Aligned_cols=88 Identities=14% Similarity=0.180 Sum_probs=46.8
Q ss_pred HHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC----CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH--
Q 023753 181 NYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRG----DFAKAEELCGRAILANPSDGNILSLYADLIWQ-- 254 (277)
Q Consensus 181 ~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~G----d~eeA~e~~ekALeldP~n~~al~~LA~ll~~-- 254 (277)
.++...+++++|+.+|++|++. +++.+++++|.+|. . + ++++|+.+|++|++ +.++.+++++|.+|..
T Consensus 26 ~~~~~~~~~~~A~~~~~~a~~~--g~~~a~~~lg~~y~-~-~g~~~~~~~A~~~~~~A~~--~g~~~a~~~Lg~~y~~g~ 99 (212)
T 3rjv_A 26 DTWVSSGDYQKAEYWAQKAAAQ--GDGDALALLAQLKI-R-NPQQADYPQARQLAEKAVE--AGSKSGEIVLARVLVNRQ 99 (212)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHT--TCHHHHHHHHHHTT-S-STTSCCHHHHHHHHHHHHH--TTCHHHHHHHHHHHTCGG
T ss_pred HHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHH-c-CCCCCCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCC
Confidence 4444445566666666665543 35555556655553 2 4 55566666665533 3455555555555532
Q ss_pred -HcCCHHHHHHHHHHHHHhCC
Q 023753 255 -AHKDASRAESYFDQAVKSAP 274 (277)
Q Consensus 255 -~~Gd~deAi~~yekALeldP 274 (277)
..+++++|+.+|++|++..|
T Consensus 100 g~~~d~~~A~~~~~~A~~~~~ 120 (212)
T 3rjv_A 100 AGATDVAHAITLLQDAARDSE 120 (212)
T ss_dssp GSSCCHHHHHHHHHHHTSSTT
T ss_pred CCccCHHHHHHHHHHHHHcCC
Confidence 12455555555555555544
No 182
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.73 E-value=9.6e-08 Score=88.20 Aligned_cols=88 Identities=13% Similarity=0.160 Sum_probs=83.5
Q ss_pred CCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH--HHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCC------
Q 023753 187 HGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFA--KAEELCGRAILANPSDGNILSLYADLIWQAHKD------ 258 (277)
Q Consensus 187 Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~e--eA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd------ 258 (277)
+++++++.++.++++++|.|..+|++.+.++. ..++++ +++++++++|+++|.|..+|.+.+.++.. .++
T Consensus 124 ~~~~~EL~~~~~~l~~~pkny~aW~~R~~vl~-~l~~~~~~~EL~~~~~~i~~d~~N~sAW~~R~~ll~~-l~~~~~~~~ 201 (306)
T 3dra_A 124 FDPYREFDILEAMLSSDPKNHHVWSYRKWLVD-TFDLHNDAKELSFVDKVIDTDLKNNSAWSHRFFLLFS-KKHLATDNT 201 (306)
T ss_dssp CCTHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCTTCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHS-SGGGCCHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HhcccChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh-ccccchhhh
Confidence 68999999999999999999999999999886 788888 99999999999999999999999999888 777
Q ss_pred HHHHHHHHHHHHHhCCCC
Q 023753 259 ASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 259 ~deAi~~yekALeldPdD 276 (277)
+++++++++++|.++|+|
T Consensus 202 ~~eEl~~~~~aI~~~p~n 219 (306)
T 3dra_A 202 IDEELNYVKDKIVKCPQN 219 (306)
T ss_dssp HHHHHHHHHHHHHHCSSC
T ss_pred HHHHHHHHHHHHHhCCCC
Confidence 999999999999999997
No 183
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.71 E-value=1.2e-07 Score=88.90 Aligned_cols=97 Identities=12% Similarity=-0.017 Sum_probs=82.7
Q ss_pred hHHHHHH-hCC--CcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 023753 178 SNNNYSN-NNH--GSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGD-FAKAEELCGRAILANPSDGNILSLYADLIW 253 (277)
Q Consensus 178 yY~~m~e-~~G--d~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd-~eeA~e~~ekALeldP~n~~al~~LA~ll~ 253 (277)
+++.++. ..+ ++++++.++.+++++||.|..+|+..+.++. ..+. ++++++++.++|+.+|.|..+|.+.+.++.
T Consensus 112 ~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~-~l~~~~~eel~~~~~~I~~~p~N~SAW~~R~~ll~ 190 (331)
T 3dss_A 112 HHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAA-QAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLP 190 (331)
T ss_dssp HHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHH
T ss_pred HHHHHHHhccCcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HhCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Confidence 4443333 334 4789999999999999999999999998886 6777 699999999999999999999999999888
Q ss_pred HHc--------------CCHHHHHHHHHHHHHhCCCC
Q 023753 254 QAH--------------KDASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 254 ~~~--------------Gd~deAi~~yekALeldPdD 276 (277)
. . +.++++++++++||.++|+|
T Consensus 191 ~-l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~P~d 226 (331)
T 3dss_A 191 Q-LHPQPDSGPQGRLPENVLLKELELVQNAFFTDPND 226 (331)
T ss_dssp H-HSCCC------CCCHHHHHHHHHHHHHHHHHSTTC
T ss_pred H-hhhccccccccccchHHHHHHHHHHHHHHHhCCCC
Confidence 7 5 45889999999999999987
No 184
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.71 E-value=6.7e-08 Score=73.15 Aligned_cols=74 Identities=12% Similarity=0.108 Sum_probs=62.5
Q ss_pred HHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHH
Q 023753 179 NNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPS--DGNILSLYADLIW 253 (277)
Q Consensus 179 Y~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~--n~~al~~LA~ll~ 253 (277)
+..++...+++++|+.+|+++++++|+++.+++++|.++. ..|++++|+.+|++|++++|. +..++..+..++.
T Consensus 25 lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~l~~~l~ 100 (115)
T 2kat_A 25 LGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQ-GQGDRAGARQAWESGLAAAQSRGDQQVVKELQVFLR 100 (115)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhccccccHHHHHHHHHHHH
Confidence 3466777899999999999999999999999999999997 899999999999999999884 4455544444443
No 185
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.70 E-value=3.6e-08 Score=96.56 Aligned_cols=88 Identities=10% Similarity=0.064 Sum_probs=76.1
Q ss_pred HHhCCCcHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHH---HHH
Q 023753 183 SNNNHGSSSTDAYYEKMIEA-----NPGNA---LLLGNYARFLKEVRGDFAKAEELCGRAILA-----NPSDGN---ILS 246 (277)
Q Consensus 183 ~e~~Gd~deAi~~yekALel-----dP~n~---~al~nLA~lL~e~~Gd~eeA~e~~ekALel-----dP~n~~---al~ 246 (277)
+..+|++++|+..|+++|++ .|+++ ..+.++|.+|. .+|+|++|+.+|++|+++ -|++|. .++
T Consensus 319 ~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~-~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~ 397 (490)
T 3n71_A 319 ARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLS-YLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVM 397 (490)
T ss_dssp HHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHH
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHH
Confidence 44679999999999999987 45665 56889999997 899999999999999987 355554 588
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh
Q 023753 247 LYADLIWQAHKDASRAESYFDQAVKS 272 (277)
Q Consensus 247 ~LA~ll~~~~Gd~deAi~~yekALel 272 (277)
++|.+|+. +|++++|+.+|++|+++
T Consensus 398 nLa~~~~~-~G~~~eA~~~~~~Al~i 422 (490)
T 3n71_A 398 RAGLTNWH-AGHIEVGHGMICKAYAI 422 (490)
T ss_dssp HHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-CCCHHHHHHHHHHHHHH
Confidence 99999999 99999999999999976
No 186
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.70 E-value=2.9e-08 Score=95.86 Aligned_cols=85 Identities=13% Similarity=0.024 Sum_probs=74.2
Q ss_pred CCCcHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHH---HHHHHH
Q 023753 186 NHGSSSTDAYYEKMIEA-----NPGNA---LLLGNYARFLKEVRGDFAKAEELCGRAILA-----NPSDGN---ILSLYA 249 (277)
Q Consensus 186 ~Gd~deAi~~yekALel-----dP~n~---~al~nLA~lL~e~~Gd~eeA~e~~ekALel-----dP~n~~---al~~LA 249 (277)
.|+|++|+..|+++|++ .|+++ ..+.++|.+|. .+|+|++|+.+|++|+++ -|+.|. .++++|
T Consensus 311 ~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~-~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa 389 (433)
T 3qww_A 311 YKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCL-YMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLG 389 (433)
T ss_dssp TSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHH-hhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHH
Confidence 47899999999999985 57775 56889999997 899999999999999987 355544 588999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHh
Q 023753 250 DLIWQAHKDASRAESYFDQAVKS 272 (277)
Q Consensus 250 ~ll~~~~Gd~deAi~~yekALel 272 (277)
.+|+. +|++++|+.+|++|+++
T Consensus 390 ~~~~~-qg~~~eA~~~~~~Al~i 411 (433)
T 3qww_A 390 RLYMG-LENKAAGEKALKKAIAI 411 (433)
T ss_dssp HHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHh-ccCHHHHHHHHHHHHHH
Confidence 99999 99999999999999986
No 187
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.66 E-value=3.2e-08 Score=91.09 Aligned_cols=67 Identities=13% Similarity=-0.047 Sum_probs=58.2
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CC-CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 023753 207 ALLLGNYARFLKEVRGDFAKAEELCGRAILAN--PS-DGNILSLYADLIWQAHKDASRAESYFDQAVKSAPD 275 (277)
Q Consensus 207 ~~al~nLA~lL~e~~Gd~eeA~e~~ekALeld--P~-n~~al~~LA~ll~~~~Gd~deAi~~yekALeldPd 275 (277)
..+++++|.++. ..|++++|+.+|++++... |. .+.+++++|.++.. +|+.++|+.+|++++..+|+
T Consensus 171 ~~a~~~LG~al~-~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~-lGr~deA~~~l~~a~a~~P~ 240 (282)
T 4f3v_A 171 GAAGVAHGVAAA-NLALFTEAERRLTEANDSPAGEACARAIAWYLAMARRS-QGNESAAVALLEWLQTTHPE 240 (282)
T ss_dssp HHHHHHHHHHHH-HTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHH-HCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHH-cCCHHHHHHHHHHHHhcCCc
Confidence 347889998886 8999999999999998654 55 66789999999999 99999999999999999986
No 188
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.64 E-value=5e-08 Score=88.65 Aligned_cols=91 Identities=14% Similarity=-0.007 Sum_probs=70.8
Q ss_pred HHHHhCCCcHHHHHHHHHHHHhCC------CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-------CHHHHHH
Q 023753 181 NYSNNNHGSSSTDAYYEKMIEANP------GNALLLGNYARFLKEVRGDFAKAEELCGRAILANPS-------DGNILSL 247 (277)
Q Consensus 181 ~m~e~~Gd~deAi~~yekALeldP------~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~-------n~~al~~ 247 (277)
..+...+++++|+.+|++|+++.+ ..+.+++++|.++. ..+++++|+.++++|+++.+. .+.++.+
T Consensus 109 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~-~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~ 187 (378)
T 3q15_A 109 MYEFDQKEYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYY-HMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFV 187 (378)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHH
T ss_pred HHHHHHCCHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHH-HcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHH
Confidence 334567889999999999987732 24567888888887 788899999999998887543 2446778
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhC
Q 023753 248 YADLIWQAHKDASRAESYFDQAVKSA 273 (277)
Q Consensus 248 LA~ll~~~~Gd~deAi~~yekALeld 273 (277)
+|.++.. .|++++|+.+|++|+++.
T Consensus 188 lg~~y~~-~~~~~~A~~~~~~al~~~ 212 (378)
T 3q15_A 188 IAGNYDD-FKHYDKALPHLEAALELA 212 (378)
T ss_dssp HHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-hCCHHHHHHHHHHHHHHH
Confidence 8888888 899999999998888763
No 189
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.60 E-value=2.4e-07 Score=82.99 Aligned_cols=94 Identities=15% Similarity=0.046 Sum_probs=80.8
Q ss_pred HHHHHHhCCCcHHHHHHHHHHHHhC--------CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-----CHHHH
Q 023753 179 NNNYSNNNHGSSSTDAYYEKMIEAN--------PGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPS-----DGNIL 245 (277)
Q Consensus 179 Y~~m~e~~Gd~deAi~~yekALeld--------P~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~-----n~~al 245 (277)
...++...|++++|+.+|++++++. |....++.++|.++. ..|++++|+.+|++++.+.+. ...++
T Consensus 99 la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 177 (373)
T 1hz4_A 99 QSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLW-AWARLDEAEASARSGIEVLSSYQPQQQLQCL 177 (373)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHTTTSCGGGGHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHhhccCcHHHHHHH
Confidence 4466677899999999999999975 344567888999887 799999999999999999875 34678
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 023753 246 SLYADLIWQAHKDASRAESYFDQAVKSAP 274 (277)
Q Consensus 246 ~~LA~ll~~~~Gd~deAi~~yekALeldP 274 (277)
..+|.++.. .|++++|+.++++++++.+
T Consensus 178 ~~la~~~~~-~g~~~~A~~~l~~a~~~~~ 205 (373)
T 1hz4_A 178 AMLIQCSLA-RGDLDNARSQLNRLENLLG 205 (373)
T ss_dssp HHHHHHHHH-HTCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHH-cCCHHHHHHHHHHHHHHHh
Confidence 889999999 9999999999999998743
No 190
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.58 E-value=5e-07 Score=84.64 Aligned_cols=86 Identities=14% Similarity=0.141 Sum_probs=81.0
Q ss_pred cHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCC-HHHHHHH
Q 023753 189 SSSTDAYYEKMIEANPGNALLLGNYARFLKEVRG--DFAKAEELCGRAILANPSDGNILSLYADLIWQAHKD-ASRAESY 265 (277)
Q Consensus 189 ~deAi~~yekALeldP~n~~al~nLA~lL~e~~G--d~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd-~deAi~~ 265 (277)
+++++.++.+++..+|.+..+|++.+.++. ..+ +++++++++.++++++|.|..+|.+.+.++.. .+. +++++++
T Consensus 90 l~~EL~~~~~~L~~~PKny~aW~hR~wlL~-~l~~~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~-l~~~~~eel~~ 167 (331)
T 3dss_A 90 VKAELGFLESCLRVNPKSYGTWHHRCWLLS-RLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQ-AAVAPAEELAF 167 (331)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHh-ccCcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-hCcCHHHHHHH
Confidence 679999999999999999999999999986 677 59999999999999999999999999999988 888 6999999
Q ss_pred HHHHHHhCCCC
Q 023753 266 FDQAVKSAPDD 276 (277)
Q Consensus 266 yekALeldPdD 276 (277)
++++|+.+|.|
T Consensus 168 ~~~~I~~~p~N 178 (331)
T 3dss_A 168 TDSLITRNFSN 178 (331)
T ss_dssp HHHHHHHCSCC
T ss_pred HHHHHHHCCCC
Confidence 99999999987
No 191
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.58 E-value=1.1e-07 Score=85.27 Aligned_cols=93 Identities=14% Similarity=0.121 Sum_probs=76.0
Q ss_pred HHHHhCCCcHHHHHHHHHHHHhCCCCH------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--------CCCHHHHH
Q 023753 181 NYSNNNHGSSSTDAYYEKMIEANPGNA------LLLGNYARFLKEVRGDFAKAEELCGRAILAN--------PSDGNILS 246 (277)
Q Consensus 181 ~m~e~~Gd~deAi~~yekALeldP~n~------~al~nLA~lL~e~~Gd~eeA~e~~ekALeld--------P~n~~al~ 246 (277)
.++...|++++|+.+|++++++.|... .++.++|.++. ..|++++|+.+|++++++. |....++.
T Consensus 61 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~-~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~ 139 (373)
T 1hz4_A 61 EVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILF-AQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVR 139 (373)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHH
T ss_pred HHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHH
Confidence 455567999999999999998766432 34678888886 7899999999999999875 33456778
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 023753 247 LYADLIWQAHKDASRAESYFDQAVKSAPD 275 (277)
Q Consensus 247 ~LA~ll~~~~Gd~deAi~~yekALeldPd 275 (277)
++|.+++. .|++++|+.+|++++++.|.
T Consensus 140 ~la~~~~~-~g~~~~A~~~~~~al~~~~~ 167 (373)
T 1hz4_A 140 IRAQLLWA-WARLDEAEASARSGIEVLSS 167 (373)
T ss_dssp HHHHHHHH-TTCHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHH-hcCHHHHHHHHHHHHHHhhc
Confidence 89999998 99999999999999988774
No 192
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.57 E-value=1e-07 Score=91.52 Aligned_cols=86 Identities=13% Similarity=-0.058 Sum_probs=74.5
Q ss_pred hCCCcHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHH---HHHHH
Q 023753 185 NNHGSSSTDAYYEKMIEA-----NPGNA---LLLGNYARFLKEVRGDFAKAEELCGRAILA-----NPSDGN---ILSLY 248 (277)
Q Consensus 185 ~~Gd~deAi~~yekALel-----dP~n~---~al~nLA~lL~e~~Gd~eeA~e~~ekALel-----dP~n~~---al~~L 248 (277)
.++++++|+..|++++++ .|+++ ..+.++|.+|. .+|+|++|+.++++++++ -|++|. .++++
T Consensus 299 ~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~-~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nL 377 (429)
T 3qwp_A 299 AHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACI-NLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKV 377 (429)
T ss_dssp HTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHH
T ss_pred hhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHH-hhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHH
Confidence 468999999999999976 46665 56889999887 799999999999999976 355555 58899
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHh
Q 023753 249 ADLIWQAHKDASRAESYFDQAVKS 272 (277)
Q Consensus 249 A~ll~~~~Gd~deAi~~yekALel 272 (277)
|.+|+. +|++++|+.+|++|+++
T Consensus 378 a~~~~~-~g~~~eA~~~~~~Al~i 400 (429)
T 3qwp_A 378 GKLQLH-QGMFPQAMKNLRLAFDI 400 (429)
T ss_dssp HHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHh-cCCHHHHHHHHHHHHHH
Confidence 999999 99999999999999976
No 193
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.54 E-value=5.8e-07 Score=68.87 Aligned_cols=71 Identities=13% Similarity=0.092 Sum_probs=61.5
Q ss_pred HHHHHHhCCCcHHHHHHHHHHHHhC-------CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 023753 179 NNNYSNNNHGSSSTDAYYEKMIEAN-------PGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYAD 250 (277)
Q Consensus 179 Y~~m~e~~Gd~deAi~~yekALeld-------P~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ 250 (277)
.+..+...++|..|+.+|++|++.. +..+.++.+||.+++ ..|++++|+.++++|++++|+++.++.+++.
T Consensus 11 lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~-~~g~~~~A~~~~~~al~l~P~~~~~~~n~~~ 88 (104)
T 2v5f_A 11 LGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVY-QQGDLDKALLLTKKLLELDPEHQRANGNLKY 88 (104)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHH-HccCHHHHHHHHHHHHhcCCCCHHHHhhHHH
Confidence 4566777899999999999999973 345788999999998 8999999999999999999999999888873
No 194
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.52 E-value=3e-07 Score=86.91 Aligned_cols=98 Identities=7% Similarity=-0.012 Sum_probs=86.5
Q ss_pred hhHHH-HHHhCC-CcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc-C-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 023753 177 GSNNN-YSNNNH-GSSSTDAYYEKMIEANPGNALLLGNYARFLKEVR-G-DFAKAEELCGRAILANPSDGNILSLYADLI 252 (277)
Q Consensus 177 ~yY~~-m~e~~G-d~deAi~~yekALeldP~n~~al~nLA~lL~e~~-G-d~eeA~e~~ekALeldP~n~~al~~LA~ll 252 (277)
.+|++ ++...+ .+++++.++.++|+.+|.+..+|+..+.++. .. + ++++++++++++++++|.|..+|.+.+.++
T Consensus 91 Wn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~-~l~~~~~~~EL~~~~k~L~~dpkNy~AW~~R~wvl 169 (349)
T 3q7a_A 91 WQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLD-RISPQDPVSEIEYIHGSLLPDPKNYHTWAYLHWLY 169 (349)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHH-HHCCSCCHHHHHHHHHHTSSCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH-HhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 35553 333446 5999999999999999999999999999987 55 7 899999999999999999999999999998
Q ss_pred HHHcCCHH--------HHHHHHHHHHHhCCCC
Q 023753 253 WQAHKDAS--------RAESYFDQAVKSAPDD 276 (277)
Q Consensus 253 ~~~~Gd~d--------eAi~~yekALeldPdD 276 (277)
.. .+.++ +++++++++|+.+|.|
T Consensus 170 ~~-l~~~~~~~~~~~~eELe~~~k~I~~dp~N 200 (349)
T 3q7a_A 170 SH-FSTLGRISEAQWGSELDWCNEMLRVDGRN 200 (349)
T ss_dssp HH-HHHTTCCCHHHHHHHHHHHHHHHHHCTTC
T ss_pred HH-hccccccchhhHHHHHHHHHHHHHhCCCC
Confidence 87 77777 9999999999999987
No 195
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.50 E-value=8.3e-07 Score=83.70 Aligned_cols=82 Identities=15% Similarity=0.127 Sum_probs=66.9
Q ss_pred CcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH---HcCCHH
Q 023753 188 GSSSTDAYYEKMIEANPGNALLLGNYARFLKEV----RGDFAKAEELCGRAILANPSDGNILSLYADLIWQ---AHKDAS 260 (277)
Q Consensus 188 d~deAi~~yekALeldP~n~~al~nLA~lL~e~----~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~---~~Gd~d 260 (277)
++++|+.+|++|++. +++.+++++|.+|. . .+++++|+.+|++|++. .++.+++++|.+|.. ..+|++
T Consensus 346 ~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~-~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~Lg~~y~~g~g~~~d~~ 420 (490)
T 2xm6_A 346 EHKKAVEWFRKAAAK--GEKAAQFNLGNALL-QGKGVKKDEQQAAIWMRKAAEQ--GLSAAQVQLGEIYYYGLGVERDYV 420 (490)
T ss_dssp HHHHHHHHHHHHHHT--TCHHHHHHHHHHHH-HTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHH
T ss_pred cHHHHHHHHHHHHHC--CCHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHcCCCCCCCHH
Confidence 677888888888887 67888888888876 5 67889999999998875 468888888888875 147889
Q ss_pred HHHHHHHHHHHhCC
Q 023753 261 RAESYFDQAVKSAP 274 (277)
Q Consensus 261 eAi~~yekALeldP 274 (277)
+|+.+|++|++..|
T Consensus 421 ~A~~~~~~A~~~~~ 434 (490)
T 2xm6_A 421 QAWAWFDTASTNDM 434 (490)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHCCC
Confidence 99999999988874
No 196
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.49 E-value=8.7e-07 Score=67.89 Aligned_cols=61 Identities=13% Similarity=0.189 Sum_probs=54.9
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhC-------CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 023753 214 ARFLKEVRGDFAKAEELCGRAILAN-------PSDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 214 A~lL~e~~Gd~eeA~e~~ekALeld-------P~n~~al~~LA~ll~~~~Gd~deAi~~yekALeldPdD 276 (277)
|.+++ ..++|..|+..|++|++.. +..+.++..||.+++. +|++++|+.++++|++++|++
T Consensus 12 G~~~~-~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~-~g~~~~A~~~~~~al~l~P~~ 79 (104)
T 2v5f_A 12 GKVAY-TEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQ-QGDLDKALLLTKKLLELDPEH 79 (104)
T ss_dssp HHHHH-HTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHH-HccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHhcCCCC
Confidence 55666 7899999999999999974 3568899999999999 999999999999999999986
No 197
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.47 E-value=5.4e-07 Score=85.52 Aligned_cols=92 Identities=15% Similarity=0.112 Sum_probs=74.5
Q ss_pred hHHHHHHhCC---CcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc----CCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 023753 178 SNNNYSNNNH---GSSSTDAYYEKMIEANPGNALLLGNYARFLKEVR----GDFAKAEELCGRAILANPSDGNILSLYAD 250 (277)
Q Consensus 178 yY~~m~e~~G---d~deAi~~yekALeldP~n~~al~nLA~lL~e~~----Gd~eeA~e~~ekALeldP~n~~al~~LA~ 250 (277)
.+..++...+ ++++|+.+|+++++.+|.++.+++++|.+|. .. +++++|+.+|++|+ |.++.+++++|.
T Consensus 181 ~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~~a~~~~~Lg~~y~-~g~~~~~d~~~A~~~~~~aa---~g~~~a~~~Lg~ 256 (452)
T 3e4b_A 181 ELATVYQKKQQPEQQAELLKQMEAGVSRGTVTAQRVDSVARVLG-DATLGTPDEKTAQALLEKIA---PGYPASWVSLAQ 256 (452)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHT-CGGGSSCCHHHHHHHHHHHG---GGSTHHHHHHHH
T ss_pred HHHHHHHHcCCcccHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh-CCCCCCCCHHHHHHHHHHHc---CCCHHHHHHHHH
Confidence 4446666677 8889999999999999999988888988774 33 68899999999987 888899999998
Q ss_pred HHH--HHcCCHHHHHHHHHHHHHhC
Q 023753 251 LIW--QAHKDASRAESYFDQAVKSA 273 (277)
Q Consensus 251 ll~--~~~Gd~deAi~~yekALeld 273 (277)
+|+ ...+++++|+.+|++|++..
T Consensus 257 ~~~~~~~~~d~~~A~~~~~~Aa~~g 281 (452)
T 3e4b_A 257 LLYDFPELGDVEQMMKYLDNGRAAD 281 (452)
T ss_dssp HHHHSGGGCCHHHHHHHHHHHHHTT
T ss_pred HHHhCCCCCCHHHHHHHHHHHHHCC
Confidence 854 22788899999999888653
No 198
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.43 E-value=9.9e-07 Score=67.46 Aligned_cols=54 Identities=15% Similarity=0.070 Sum_probs=50.9
Q ss_pred cHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q 023753 189 SSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGN 243 (277)
Q Consensus 189 ~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~ 243 (277)
.++|..++++||++||+++.+++.+|..++ ..|+|++|+.+|+++++.+|.++.
T Consensus 25 ~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~-~~g~y~~Ai~~w~~~l~~~p~~~~ 78 (93)
T 3bee_A 25 TDEVSLLLEQALQLEPYNEAALSLIANDHF-ISFRFQEAIDTWVLLLDSNDPNLD 78 (93)
T ss_dssp CHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHTCCCTTCC
T ss_pred CHHHHHHHHHHHHHCcCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhhCCCCcc
Confidence 799999999999999999999999999997 799999999999999999998544
No 199
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.34 E-value=1.4e-06 Score=82.59 Aligned_cols=80 Identities=11% Similarity=0.022 Sum_probs=43.0
Q ss_pred CCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC-----CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH---cC
Q 023753 186 NHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRG-----DFAKAEELCGRAILANPSDGNILSLYADLIWQA---HK 257 (277)
Q Consensus 186 ~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~G-----d~eeA~e~~ekALeldP~n~~al~~LA~ll~~~---~G 257 (277)
.+++++|+.+|++|++. +++.+++++|.+|. .| |+++|+.+|++|+ |.++.+++++|.+|..- ..
T Consensus 264 ~~d~~~A~~~~~~Aa~~--g~~~A~~~Lg~~y~--~G~g~~~d~~~A~~~~~~Aa---~g~~~A~~~Lg~~y~~G~g~~~ 336 (452)
T 3e4b_A 264 LGDVEQMMKYLDNGRAA--DQPRAELLLGKLYY--EGKWVPADAKAAEAHFEKAV---GREVAADYYLGQIYRRGYLGKV 336 (452)
T ss_dssp GCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHH--HCSSSCCCHHHHHHHHHTTT---TTCHHHHHHHHHHHHTTTTSSC
T ss_pred CCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHH--cCCCCCCCHHHHHHHHHHHh---CCCHHHHHHHHHHHHCCCCCCc
Confidence 45555555555555543 25555555555543 23 5566666666555 55556666666555430 11
Q ss_pred CHHHHHHHHHHHHHh
Q 023753 258 DASRAESYFDQAVKS 272 (277)
Q Consensus 258 d~deAi~~yekALel 272 (277)
|+++|+.+|++|.+.
T Consensus 337 d~~~A~~~~~~Aa~~ 351 (452)
T 3e4b_A 337 YPQKALDHLLTAARN 351 (452)
T ss_dssp CHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHhh
Confidence 566666666665543
No 200
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=98.32 E-value=2.1e-06 Score=70.45 Aligned_cols=88 Identities=13% Similarity=0.049 Sum_probs=77.9
Q ss_pred CCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH---HHHHHHHHHHHHhC-C-CCHHHHHHHHHHHHHHcCCHHH
Q 023753 187 HGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDF---AKAEELCGRAILAN-P-SDGNILSLYADLIWQAHKDASR 261 (277)
Q Consensus 187 Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~---eeA~e~~ekALeld-P-~n~~al~~LA~ll~~~~Gd~de 261 (277)
.....+...|.++++.++.+..+.++||++|. ...+. .+++..++..+..+ | ..-+.++.+|..+++ .|+|++
T Consensus 15 ~~l~~~~~~y~~e~~~~~~s~~~~F~yAw~Lv-~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yk-lg~Y~~ 92 (126)
T 1nzn_A 15 EDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLV-RTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYR-LKEYEK 92 (126)
T ss_dssp HHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHT-TSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHH-TTCHHH
T ss_pred HHHHHHHHHHHHHhccCCCcHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHH-hhhHHH
Confidence 45678899999999999999999999999986 55544 45999999999987 5 577899999999999 999999
Q ss_pred HHHHHHHHHHhCCCC
Q 023753 262 AESYFDQAVKSAPDD 276 (277)
Q Consensus 262 Ai~~yekALeldPdD 276 (277)
|+.+++..|+++|+|
T Consensus 93 A~~~~~~lL~~eP~n 107 (126)
T 1nzn_A 93 ALKYVRGLLQTEPQN 107 (126)
T ss_dssp HHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHhCCCC
Confidence 999999999999987
No 201
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.29 E-value=2.9e-06 Score=67.91 Aligned_cols=79 Identities=19% Similarity=0.157 Sum_probs=68.5
Q ss_pred CCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH---HcCCHHHHH
Q 023753 187 HGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQ---AHKDASRAE 263 (277)
Q Consensus 187 Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~---~~Gd~deAi 263 (277)
.++++|+.+|++|.+.....+. +|.+|. .....++|+++|++|++. .++.+++++|.+|.. ..+|+++|+
T Consensus 9 ~d~~~A~~~~~~aa~~g~~~a~----lg~~y~-~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~ 81 (138)
T 1klx_A 9 KDLKKAIQYYVKACELNEMFGC----LSLVSN-SQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKAA 81 (138)
T ss_dssp HHHHHHHHHHHHHHHTTCTTHH----HHHHTC-TTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHH
T ss_pred cCHHHHHHHHHHHHcCCCHhhh----HHHHHH-cCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHHHH
Confidence 5789999999999998855444 888776 678899999999999987 789999999999876 257999999
Q ss_pred HHHHHHHHh
Q 023753 264 SYFDQAVKS 272 (277)
Q Consensus 264 ~~yekALel 272 (277)
.+|++|.+.
T Consensus 82 ~~~~~Aa~~ 90 (138)
T 1klx_A 82 QYYSKACGL 90 (138)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHcC
Confidence 999999876
No 202
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.28 E-value=6.9e-06 Score=77.39 Aligned_cols=81 Identities=15% Similarity=0.171 Sum_probs=46.5
Q ss_pred CCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc-----
Q 023753 186 NHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEV----RGDFAKAEELCGRAILANPSDGNILSLYADLIWQAH----- 256 (277)
Q Consensus 186 ~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~----~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~----- 256 (277)
.+++++|+.+|+++++. .++.+++++|.++. . .+++++|+.+|++|++. .++.+++.+|.++.. .
T Consensus 236 ~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~y~-~g~~~~~d~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~-~~~g~~ 309 (490)
T 2xm6_A 236 TQDYTQSRVLFSQSAEQ--GNSIAQFRLGYILE-QGLAGAKEPLKALEWYRKSAEQ--GNSDGQYYLAHLYDK-GAEGVA 309 (490)
T ss_dssp CCCHHHHHHHHHHHHTT--TCHHHHHHHHHHHH-HTTTSSCCHHHHHHHHHHHHTT--TCHHHHHHHHHHHHH-CBTTBC
T ss_pred CCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHH-CCCCCCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHc-CCCCCc
Confidence 34555666666665543 34555566665554 4 45666666666666543 455566666666655 4
Q ss_pred CCHHHHHHHHHHHHHh
Q 023753 257 KDASRAESYFDQAVKS 272 (277)
Q Consensus 257 Gd~deAi~~yekALel 272 (277)
+++++|+.+|++|++.
T Consensus 310 ~~~~~A~~~~~~a~~~ 325 (490)
T 2xm6_A 310 KNREQAISWYTKSAEQ 325 (490)
T ss_dssp CCHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHhc
Confidence 5666666666666554
No 203
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.23 E-value=1.9e-06 Score=84.28 Aligned_cols=91 Identities=10% Similarity=0.078 Sum_probs=76.3
Q ss_pred HHHHHhCCCcHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHHH--
Q 023753 180 NNYSNNNHGSSSTDAYYEKMIEA-----NPGNA---LLLGNYARFLKEVRGDFAKAEELCGRAILA-----NPSDGNI-- 244 (277)
Q Consensus 180 ~~m~e~~Gd~deAi~~yekALel-----dP~n~---~al~nLA~lL~e~~Gd~eeA~e~~ekALel-----dP~n~~a-- 244 (277)
..+|..+|++++|+.+|+++|++ -|++| ..++|+|.+|. .+|++++|+.+|++|+++ -|+.|.+
T Consensus 358 a~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~-~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~ 436 (490)
T 3n71_A 358 SEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNW-HAGHIEVGHGMICKAYAILLVTHGPSHPITKD 436 (490)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHH
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHHhCCCChHHHH
Confidence 35566789999999999999987 46665 56899999997 899999999999999986 5666654
Q ss_pred -HHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 023753 245 -LSLYADLIWQAHKDASRAESYFDQAVKS 272 (277)
Q Consensus 245 -l~~LA~ll~~~~Gd~deAi~~yekALel 272 (277)
+.+++.++.+ ++.+++|+..|.+|.+.
T Consensus 437 ~~~~l~~~~~e-~~~~~~ae~~~~~~~~~ 464 (490)
T 3n71_A 437 LEAMRMQTEME-LRMFRQNEFMYHKMREA 464 (490)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 5678888888 89999999999998764
No 204
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.08 E-value=8.6e-06 Score=68.76 Aligned_cols=72 Identities=8% Similarity=-0.049 Sum_probs=60.7
Q ss_pred HHHHHHhCC---CcHHHHHHHHHHHHhC-C-CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 023753 179 NNNYSNNNH---GSSSTDAYYEKMIEAN-P-GNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADL 251 (277)
Q Consensus 179 Y~~m~e~~G---d~deAi~~yekALeld-P-~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~l 251 (277)
|...+.... ++++++..|+..++.+ | ++..++|++|..++ +.++|++|.+|++++++++|+|..+....-.+
T Consensus 38 ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~-kl~~Y~~A~~y~~~lL~ieP~n~QA~~Lk~~i 114 (152)
T 1pc2_A 38 YAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNY-RLKEYEKALKYVRGLLQTEPQNNQAKELERLI 114 (152)
T ss_dssp HHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHH-HTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHH-HccCHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 334444444 6779999999999999 7 67899999999997 89999999999999999999999988765443
No 205
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.94 E-value=1.6e-05 Score=72.08 Aligned_cols=88 Identities=14% Similarity=0.086 Sum_probs=74.7
Q ss_pred hCCCcHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHH
Q 023753 185 NNHGSSSTDAYYEKMIEANPG------NALLLGNYARFLKEVRGDFAKAEELCGRAILA------NPSDGNILSLYADLI 252 (277)
Q Consensus 185 ~~Gd~deAi~~yekALeldP~------n~~al~nLA~lL~e~~Gd~eeA~e~~ekALel------dP~n~~al~~LA~ll 252 (277)
..+++++|+.+|++++...+. -..++.++|.++. ..|+|++|+.++++++.. .+....++..++.+|
T Consensus 107 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (434)
T 4b4t_Q 107 VPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHY-QKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVY 185 (434)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHH-HccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHH
Confidence 457889999999999887433 2578889999887 799999999999999886 344577899999999
Q ss_pred HHHcCCHHHHHHHHHHHHHhCC
Q 023753 253 WQAHKDASRAESYFDQAVKSAP 274 (277)
Q Consensus 253 ~~~~Gd~deAi~~yekALeldP 274 (277)
.. .+++++|+.+|++++.+.+
T Consensus 186 ~~-~~~~~~A~~~~~~al~~~~ 206 (434)
T 4b4t_Q 186 HK-LRNLAKSKASLTAARTAAN 206 (434)
T ss_dssp HH-TTCHHHHHHHHHHHHHHHH
T ss_pred HH-hCcHHHHHHHHHHHHHHhh
Confidence 99 9999999999999998754
No 206
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=97.94 E-value=2.6e-05 Score=72.53 Aligned_cols=83 Identities=19% Similarity=0.151 Sum_probs=71.4
Q ss_pred CCcHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----------CCCCHHHHHHHHHHHHH
Q 023753 187 HGSSSTDAYYEKMIEANPG--NALLLGNYARFLKEVRGDFAKAEELCGRAILA----------NPSDGNILSLYADLIWQ 254 (277)
Q Consensus 187 Gd~deAi~~yekALeldP~--n~~al~nLA~lL~e~~Gd~eeA~e~~ekALel----------dP~n~~al~~LA~ll~~ 254 (277)
+++.+|...|+++.+..|+ .+..+++ ++ +..|++++|+..++++++. +|+|+.++.++..+.+.
T Consensus 192 ~~~q~A~~~f~El~~~~p~~~~~~lLln---~~-~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~~LaN~i~l~~~ 267 (310)
T 3mv2_B 192 ETATSNFYYYEELSQTFPTWKTQLGLLN---LH-LQQRNIAEAQGIVELLLSDYYSVEQKENAVLYKPTFLANQITLALM 267 (310)
T ss_dssp STTTHHHHHHHHHHTTSCSHHHHHHHHH---HH-HHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCCCcccHHHHHH---HH-HHcCCHHHHHHHHHHHHHhcccccccccCCCCCHHHHHHHHHHHHH
Confidence 4899999999999988887 3445555 44 3789999999999988876 59999999999888888
Q ss_pred HcCCHHHHHHHHHHHHHhCCCC
Q 023753 255 AHKDASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 255 ~~Gd~deAi~~yekALeldPdD 276 (277)
.|+ +|.++++++.+.+|++
T Consensus 268 -lgk--~a~~l~~qL~~~~P~h 286 (310)
T 3mv2_B 268 -QGL--DTEDLTNQLVKLDHEH 286 (310)
T ss_dssp -TTC--TTHHHHHHHHHTTCCC
T ss_pred -hCh--HHHHHHHHHHHhCCCC
Confidence 887 9999999999999987
No 207
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=97.89 E-value=4.1e-05 Score=71.25 Aligned_cols=97 Identities=9% Similarity=0.004 Sum_probs=78.3
Q ss_pred hhHHHHHHhCCCcHHHHHHHHHHHHhCC--CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-----CHH-HHHHH
Q 023753 177 GSNNNYSNNNHGSSSTDAYYEKMIEANP--GNALLLGNYARFLKEVRGDFAKAEELCGRAILANPS-----DGN-ILSLY 248 (277)
Q Consensus 177 ~yY~~m~e~~Gd~deAi~~yekALeldP--~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~-----n~~-al~~L 248 (277)
.+...++...|++++|+..|.+.|..+| ++..++..++.++. ..++.+.|.+.++++.+.+|+ +.. +...-
T Consensus 104 ~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L-~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~Lae 182 (310)
T 3mv2_B 104 YLLATAQAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVAL-LNNNVSTASTIFDNYTNAIEDTVSGDNEMILNLAE 182 (310)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHH-HCCCHHHHHHHHHHHHhcCccccccchHHHHHHHH
Confidence 4556778888999999999999999997 78888888888886 899999999999999999993 333 33333
Q ss_pred HHHHHHHcC--CHHHHHHHHHHHHHhCCC
Q 023753 249 ADLIWQAHK--DASRAESYFDQAVKSAPD 275 (277)
Q Consensus 249 A~ll~~~~G--d~deAi~~yekALeldPd 275 (277)
|++.+. .| ++++|..+|+++.+..|+
T Consensus 183 a~v~l~-~g~~~~q~A~~~f~El~~~~p~ 210 (310)
T 3mv2_B 183 SYIKFA-TNKETATSNFYYYEELSQTFPT 210 (310)
T ss_dssp HHHHHH-HTCSTTTHHHHHHHHHHTTSCS
T ss_pred HHHHHH-hCCccHHHHHHHHHHHHHhCCC
Confidence 555665 56 899999999998887774
No 208
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=97.87 E-value=1.9e-05 Score=73.37 Aligned_cols=88 Identities=15% Similarity=0.091 Sum_probs=67.5
Q ss_pred chhhHHHHHHh-----CCCcHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-HHHHHH
Q 023753 175 FSGSNNNYSNN-----NHGSSSTDAYYEKMIEANPGN-ALLLGNYARFLKEVRGDFAKAEELCGRAILANPSD-GNILSL 247 (277)
Q Consensus 175 ~~~yY~~m~e~-----~Gd~deAi~~yekALeldP~n-~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n-~~al~~ 247 (277)
...+++.+|.. -|+.++|.++|++||+++|+. ..+++.||.+|....+++++|.+++++|+..+|+. |. ..
T Consensus 201 A~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~a~p~~~P~--~~ 278 (301)
T 3u64_A 201 VWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNNRAGFDEALDRALAIDPESVPH--NK 278 (301)
T ss_dssp HHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTCHHHHHHHHHHHHHCCGGGCSS--CH
T ss_pred HHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCCCCCC--hh
Confidence 34566677776 389999999999999999975 99999999998734699999999999999999873 43 23
Q ss_pred HHHHHHHHcCCHHHHHHHHHHH
Q 023753 248 YADLIWQAHKDASRAESYFDQA 269 (277)
Q Consensus 248 LA~ll~~~~Gd~deAi~~yekA 269 (277)
+++...+ ++|..+++++
T Consensus 279 lan~~~q-----~eA~~LL~~~ 295 (301)
T 3u64_A 279 LLVILSQ-----KRARWLKAHV 295 (301)
T ss_dssp HHHHHHH-----HHHHHHHHTH
T ss_pred HHHHHHH-----HHHHHHHHHh
Confidence 4444433 5565555544
No 209
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=97.82 E-value=7.9e-05 Score=75.71 Aligned_cols=81 Identities=6% Similarity=-0.050 Sum_probs=74.7
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHH-HHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 023753 190 SSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAE-ELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQ 268 (277)
Q Consensus 190 deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~-e~~ekALeldP~n~~al~~LA~ll~~~~Gd~deAi~~yek 268 (277)
+.....|++||...|.++.+|+.||.++. ..++.++|. ..|++|+...|.+...+..++.+... .+++++|...|++
T Consensus 326 ~Rv~~~Ye~aL~~~p~~~~lW~~ya~~~~-~~~~~~~a~r~il~rAi~~~P~s~~Lwl~~a~~ee~-~~~~e~aR~iyek 403 (679)
T 4e6h_A 326 ARMTYVYMQAAQHVCFAPEIWFNMANYQG-EKNTDSTVITKYLKLGQQCIPNSAVLAFSLSEQYEL-NTKIPEIETTILS 403 (679)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHH-HHSCCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHH-hcCcHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-hCCHHHHHHHHHH
Confidence 34678999999999999999999999886 788889997 99999999999999999999999988 9999999999999
Q ss_pred HHHh
Q 023753 269 AVKS 272 (277)
Q Consensus 269 ALel 272 (277)
++..
T Consensus 404 ~l~~ 407 (679)
T 4e6h_A 404 CIDR 407 (679)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9975
No 210
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.77 E-value=8.7e-05 Score=81.28 Aligned_cols=82 Identities=12% Similarity=0.059 Sum_probs=68.5
Q ss_pred HHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHH
Q 023753 182 YSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASR 261 (277)
Q Consensus 182 m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~de 261 (277)
+++..+++++|+++++++ +++.+|++||.++. ..|++++|+.+|.+| +|+.++...+.++.+ .|++++
T Consensus 1085 Lie~i~nldrAiE~Aerv-----n~p~vWsqLAKAql-~~G~~kEAIdsYiKA-----dD~say~eVa~~~~~-lGkyEE 1152 (1630)
T 1xi4_A 1085 LIEHIGNLDRAYEFAERC-----NEPAVWSQLAKAQL-QKGMVKEAIDSYIKA-----DDPSSYMEVVQAANT-SGNWEE 1152 (1630)
T ss_pred HHHHHhhHHHHHHHHHhc-----CCHHHHHHHHHHHH-hCCCHHHHHHHHHhc-----CChHHHHHHHHHHHH-cCCHHH
Confidence 333445555555555544 77999999999886 899999999999887 899999999999999 999999
Q ss_pred HHHHHHHHHHhCCC
Q 023753 262 AESYFDQAVKSAPD 275 (277)
Q Consensus 262 Ai~~yekALeldPd 275 (277)
|+++|..|++..++
T Consensus 1153 AIeyL~mArk~~~e 1166 (1630)
T 1xi4_A 1153 LVKYLQMARKKARE 1166 (1630)
T ss_pred HHHHHHHHHhhccc
Confidence 99999999988754
No 211
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.75 E-value=6.2e-05 Score=68.16 Aligned_cols=94 Identities=15% Similarity=0.061 Sum_probs=76.8
Q ss_pred hhHHHHHHhCCCcHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC---CC----HH
Q 023753 177 GSNNNYSNNNHGSSSTDAYYEKMIEA------NPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANP---SD----GN 243 (277)
Q Consensus 177 ~yY~~m~e~~Gd~deAi~~yekALel------dP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP---~n----~~ 243 (277)
.....++...|++++|+.++++++.. .+....++.+++.++. ..+++++|..+|++|+.+.+ .. ..
T Consensus 139 ~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~ 217 (434)
T 4b4t_Q 139 IKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYH-KLRNLAKSKASLTAARTAANSIYCPTQTVAE 217 (434)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHSCCCHHHHHH
T ss_pred HHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHhhcCCCchHHHHH
Confidence 34567888889999999999999886 3334678999999887 89999999999999998753 22 34
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 023753 244 ILSLYADLIWQAHKDASRAESYFDQAVKS 272 (277)
Q Consensus 244 al~~LA~ll~~~~Gd~deAi~~yekALel 272 (277)
++..+|.++.. .+++++|..+|.++++.
T Consensus 218 ~~~~~g~~~~~-~~~y~~A~~~~~~a~~~ 245 (434)
T 4b4t_Q 218 LDLMSGILHCE-DKDYKTAFSYFFESFES 245 (434)
T ss_dssp HHHHHHHHTTS-SSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-HHhHHHHHHHHHHHHHH
Confidence 56667777777 89999999999999865
No 212
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.66 E-value=0.00048 Score=57.70 Aligned_cols=71 Identities=14% Similarity=0.018 Sum_probs=62.6
Q ss_pred CCCHHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 023753 204 PGNALLLGNYARFLKEVRG---DFAKAEELCGRAILANP-SDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 204 P~n~~al~nLA~lL~e~~G---d~eeA~e~~ekALeldP-~n~~al~~LA~ll~~~~Gd~deAi~~yekALeldPdD 276 (277)
.-.+.+.++||++|. ... +..+++..++..+..+| ...+.++.+|..+++ .++|++|+.+.+..|+++|+|
T Consensus 36 ~vs~~t~F~YAw~Lv-~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~yk-l~~Y~~Ar~y~d~lL~~eP~n 110 (144)
T 1y8m_A 36 TATIQSRFNYAWGLI-KSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYK-LGEYSMAKRYVDTLFEHERNN 110 (144)
T ss_dssp TSCHHHHHHHHHHHH-HSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHT-TTCHHHHHHHHHHHHHTCCCC
T ss_pred CCcHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHH-hhhHHHHHHHHHHHHhcCCCc
Confidence 567899999999986 444 45689999999999999 467789999999999 999999999999999999987
No 213
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=97.64 E-value=0.00021 Score=72.62 Aligned_cols=88 Identities=9% Similarity=0.021 Sum_probs=60.6
Q ss_pred CCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---CHHHHHHHHHHHHHHcCCHHHHH
Q 023753 187 HGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPS---DGNILSLYADLIWQAHKDASRAE 263 (277)
Q Consensus 187 Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~---n~~al~~LA~ll~~~~Gd~deAi 263 (277)
++.+.|...|+++|+..|+++..|..|+.++. ..++.+.|...|++|+...|+ ...+|..+..+-.. .|+.+.+.
T Consensus 484 ~d~e~Ar~ife~~Lk~~p~~~~~w~~y~~fe~-~~~~~~~AR~lferal~~~~~~~~~~~lw~~~~~fE~~-~G~~~~~~ 561 (679)
T 4e6h_A 484 KDTKTACKVLELGLKYFATDGEYINKYLDFLI-YVNEESQVKSLFESSIDKISDSHLLKMIFQKVIFFESK-VGSLNSVR 561 (679)
T ss_dssp SCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHTTTSSSTTHHHHHHHHHHHHHHH-TCCSHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCchHHHHHHHHHHH-hCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH-cCCHHHHH
Confidence 34677777777777777777777777777664 567777777777777777662 44556566665555 67777777
Q ss_pred HHHHHHHHhCCCC
Q 023753 264 SYFDQAVKSAPDD 276 (277)
Q Consensus 264 ~~yekALeldPdD 276 (277)
..++++++..|++
T Consensus 562 ~v~~R~~~~~P~~ 574 (679)
T 4e6h_A 562 TLEKRFFEKFPEV 574 (679)
T ss_dssp HHHHHHHHHSTTC
T ss_pred HHHHHHHHhCCCC
Confidence 7777777777764
No 214
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=97.63 E-value=0.00029 Score=59.93 Aligned_cols=96 Identities=15% Similarity=0.085 Sum_probs=81.7
Q ss_pred hHHHHHHhCCCc------HHHHHHHHHHHHhCCCC--------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q 023753 178 SNNNYSNNNHGS------SSTDAYYEKMIEANPGN--------ALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGN 243 (277)
Q Consensus 178 yY~~m~e~~Gd~------deAi~~yekALeldP~n--------~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~ 243 (277)
-|-.+++..|+. ++-+..|++|+..-|-. ...|..||.+. ..+|.++|.+.|+.|+.+....+.
T Consensus 18 ~yl~llE~~g~p~~d~~l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~~--ei~D~d~aR~vy~~a~~~hKkFAK 95 (161)
T 4h7y_A 18 SLLLKLEKNSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAELK--AIQEPDDARDYFQMARANCKKFAF 95 (161)
T ss_dssp HHHHHHHHHTCSCCHHHHHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHHH--HHHCGGGCHHHHHHHHHHCTTBHH
T ss_pred HHHHHHHHcCCCchhhHHHHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHHH--HhcCHHHHHHHHHHHHHHhHHHHH
Confidence 345666666887 88899999999987753 46788888653 468999999999999999888999
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 023753 244 ILSLYADLIWQAHKDASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 244 al~~LA~ll~~~~Gd~deAi~~yekALeldPdD 276 (277)
+|..+|.+-.. +++.+.|.+.+.+|+.+.|..
T Consensus 96 iwi~~AqFEiR-qgnl~kARkILg~AiG~~~k~ 127 (161)
T 4h7y_A 96 VHISFAQFELS-QGNVKKSKQLLQKAVERGAVP 127 (161)
T ss_dssp HHHHHHHHHHH-TTCHHHHHHHHHHHHHTTCBC
T ss_pred HHHHHHHHHHH-cccHHHHHHHHHHHhccCCCc
Confidence 99999999999 999999999999999998853
No 215
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=97.62 E-value=0.00018 Score=66.02 Aligned_cols=72 Identities=8% Similarity=-0.009 Sum_probs=61.7
Q ss_pred hhhHHHHHHhCCCcHHHHHHHHHHHHhC--CC-CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 023753 176 SGSNNNYSNNNHGSSSTDAYYEKMIEAN--PG-NALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYA 249 (277)
Q Consensus 176 ~~yY~~m~e~~Gd~deAi~~yekALeld--P~-n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA 249 (277)
..+.+.++...|++++|+.+|++++... |. .+.+++++|.++. ..|+.++|..+|++++..+|+ +.+...|.
T Consensus 174 ~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~-~lGr~deA~~~l~~a~a~~P~-~~~~~aL~ 248 (282)
T 4f3v_A 174 GVAHGVAAANLALFTEAERRLTEANDSPAGEACARAIAWYLAMARR-SQGNESAAVALLEWLQTTHPE-PKVAAALK 248 (282)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHSCC-HHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhcCCc-HHHHHHHh
Confidence 3455678888899999999999999655 66 6679999999997 899999999999999999999 87776654
No 216
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=97.55 E-value=0.00025 Score=58.77 Aligned_cols=83 Identities=13% Similarity=-0.035 Sum_probs=65.5
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHcCCHHHHHHHH
Q 023753 191 STDAYYEKMIEANPGNALLLGNYARFLKEVRG---DFAKAEELCGRAILANPS-DGNILSLYADLIWQAHKDASRAESYF 266 (277)
Q Consensus 191 eAi~~yekALeldP~n~~al~nLA~lL~e~~G---d~eeA~e~~ekALeldP~-n~~al~~LA~ll~~~~Gd~deAi~~y 266 (277)
...+-|.+-+ ...-.+.+.++||++|. ... +..+++..++..++.+|. ..+.++.+|..+++ .|+|++|+.+.
T Consensus 25 ~l~~qy~~E~-~~~vs~qt~F~yAw~Lv-~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yk-lgdY~~Ar~y~ 101 (134)
T 3o48_A 25 ILRQQVVSEG-GPTATIQSRFNYAWGLI-KSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYK-LGEYSMAKRYV 101 (134)
T ss_dssp HHHHHHHHTT-GGGSCHHHHHHHHHHHH-HSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHH-HTCHHHHHHHH
T ss_pred HHHHHHHHHh-CCCCChhhHHHHHHHHH-cCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHH-hhhHHHHHHHH
Confidence 3444444433 23336789999999886 444 456899999999999984 57889999999999 99999999999
Q ss_pred HHHHHhCCCC
Q 023753 267 DQAVKSAPDD 276 (277)
Q Consensus 267 ekALeldPdD 276 (277)
+.+|++.|+|
T Consensus 102 d~lL~~eP~N 111 (134)
T 3o48_A 102 DTLFEHERNN 111 (134)
T ss_dssp HHHHTTCTTC
T ss_pred HHHHhhCCCC
Confidence 9999999987
No 217
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.41 E-value=0.00063 Score=74.66 Aligned_cols=85 Identities=8% Similarity=0.009 Sum_probs=69.0
Q ss_pred hHHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC----------------
Q 023753 178 SNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSD---------------- 241 (277)
Q Consensus 178 yY~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n---------------- 241 (277)
.|++++...|++++|+.+|.+| +|+.++.+.+.++. ..|++++|+++|+.|.+.+++.
T Consensus 1110 qLAKAql~~G~~kEAIdsYiKA-----dD~say~eVa~~~~-~lGkyEEAIeyL~mArk~~~e~~Idt~LafaYAKl~rl 1183 (1630)
T 1xi4_A 1110 QLAKAQLQKGMVKEAIDSYIKA-----DDPSSYMEVVQAAN-TSGNWEELVKYLQMARKKARESYVETELIFALAKTNRL 1183 (1630)
T ss_pred HHHHHHHhCCCHHHHHHHHHhc-----CChHHHHHHHHHHH-HcCCHHHHHHHHHHHHhhcccccccHHHHHHHHhhcCH
Confidence 4558888889999999999886 88999999999886 8999999999999888666431
Q ss_pred -----------HHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 023753 242 -----------GNILSLYADLIWQAHKDASRAESYFDQA 269 (277)
Q Consensus 242 -----------~~al~~LA~ll~~~~Gd~deAi~~yekA 269 (277)
...+..+|..+.. .|+|++|+.+|.+|
T Consensus 1184 eele~fI~~~n~ad~~~iGd~le~-eg~YeeA~~~Y~kA 1221 (1630)
T 1xi4_A 1184 AELEEFINGPNNAHIQQVGDRCYD-EKMYDAAKLLYNNV 1221 (1630)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHh-cCCHHHHHHHHHhh
Confidence 2234567777777 88888888888876
No 218
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=97.37 E-value=0.00048 Score=65.67 Aligned_cols=60 Identities=10% Similarity=0.031 Sum_probs=53.0
Q ss_pred HHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Q 023753 183 SNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNI 244 (277)
Q Consensus 183 ~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~a 244 (277)
+...|++++|+.++++|++++| +..+|..+|.++. ..|++++|+++|++|+.++|..+..
T Consensus 287 ~l~~gd~d~A~~~l~rAl~Ln~-s~~a~~llG~~~~-~~G~~~eA~e~~~~AlrL~P~~~t~ 346 (372)
T 3ly7_A 287 ALVKGKTDESYQAINTGIDLEM-SWLNYVLLGKVYE-MKGMNREAADAYLTAFNLRPGANTL 346 (372)
T ss_dssp HHHHTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSCSHHHH
T ss_pred HHhCCCHHHHHHHHHHHHhcCC-CHHHHHHHHHHHH-HCCCHHHHHHHHHHHHhcCCCcChH
Confidence 3346999999999999999997 4778888999886 8999999999999999999988743
No 219
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.34 E-value=0.00052 Score=66.03 Aligned_cols=67 Identities=13% Similarity=0.003 Sum_probs=55.5
Q ss_pred HHHHHHhCCCcHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHHHH
Q 023753 179 NNNYSNNNHGSSSTDAYYEKMIEA-----NPGNA---LLLGNYARFLKEVRGDFAKAEELCGRAILA-----NPSDGNIL 245 (277)
Q Consensus 179 Y~~m~e~~Gd~deAi~~yekALel-----dP~n~---~al~nLA~lL~e~~Gd~eeA~e~~ekALel-----dP~n~~al 245 (277)
...+|..+|+|++|+.+|+++|++ -|+++ ..++|+|.+|. .+|++++|+.+|++|+++ -|+.|.+.
T Consensus 346 La~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~-~qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~~ 424 (433)
T 3qww_A 346 AMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLYM-GLENKAAGEKALKKAIAIMEVAHGKDHPYIS 424 (433)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHTCTTCHHHH
T ss_pred HHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHH-hccCHHHHHHHHHHHHHHHHHHcCCCChHHH
Confidence 345666789999999999999987 45555 56899999997 899999999999999987 57777665
Q ss_pred H
Q 023753 246 S 246 (277)
Q Consensus 246 ~ 246 (277)
.
T Consensus 425 ~ 425 (433)
T 3qww_A 425 E 425 (433)
T ss_dssp H
T ss_pred H
Confidence 4
No 220
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.29 E-value=0.0011 Score=56.67 Aligned_cols=86 Identities=14% Similarity=0.003 Sum_probs=68.9
Q ss_pred HHHHhCCCcHHHHHHHHHHHHhCCCCHH---------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC---CC--------
Q 023753 181 NYSNNNHGSSSTDAYYEKMIEANPGNAL---------LLGNYARFLKEVRGDFAKAEELCGRAILAN---PS-------- 240 (277)
Q Consensus 181 ~m~e~~Gd~deAi~~yekALeldP~n~~---------al~nLA~lL~e~~Gd~eeA~e~~ekALeld---P~-------- 240 (277)
+.+...+.|+.|+.....++.+..+++. +++.+|.+++ ..++|.+|+.+|++||.+. +.
T Consensus 28 k~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf-~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~ 106 (167)
T 3ffl_A 28 RDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLF-HDKEYRNAVSKYTMALQQKKALSKTSKVRPST 106 (167)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHCC----------
T ss_pred HHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHH-cccHHHHHHHHHHHHHHHHHHHhcCCCccccc
Confidence 3444568999999999998777544443 7888999998 7999999999999997652 11
Q ss_pred --------------CHHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 023753 241 --------------DGNILSLYADLIWQAHKDASRAESYFDQ 268 (277)
Q Consensus 241 --------------n~~al~~LA~ll~~~~Gd~deAi~~yek 268 (277)
+.++.+.+|.|+.. .+++++|+..++.
T Consensus 107 ~~~ss~p~s~~~~~e~Elkykia~C~~~-l~~~~~Ai~~Le~ 147 (167)
T 3ffl_A 107 GNSASTPQSQCLPSEIEVKYKLAECYTV-LKQDKDAIAILDG 147 (167)
T ss_dssp ----------CCCCHHHHHHHHHHHHHH-TTCHHHHHHHHHT
T ss_pred cccCCCcccccccchHHHHHHHHHHHHH-HCCHHHHHHHHhc
Confidence 12678889999999 9999999998875
No 221
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=97.22 E-value=0.00042 Score=66.33 Aligned_cols=65 Identities=12% Similarity=0.001 Sum_probs=53.7
Q ss_pred HHHHhCCCcHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHHHHH
Q 023753 181 NYSNNNHGSSSTDAYYEKMIEA-----NPGNA---LLLGNYARFLKEVRGDFAKAEELCGRAILA-----NPSDGNILS 246 (277)
Q Consensus 181 ~m~e~~Gd~deAi~~yekALel-----dP~n~---~al~nLA~lL~e~~Gd~eeA~e~~ekALel-----dP~n~~al~ 246 (277)
.+|..+|++++|+.+|+++|++ -|++| ..++++|.+|. .+|++++|+.+|++|+++ -|+.|.+..
T Consensus 337 ~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~-~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~ 414 (429)
T 3qwp_A 337 DACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQL-HQGMFPQAMKNLRLAFDIMRVTHGREHSLIED 414 (429)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHH
T ss_pred HHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHHHHhcCCCChHHHH
Confidence 4556679999999999999976 36665 56889999997 899999999999999987 577776543
No 222
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=97.02 E-value=0.0017 Score=53.03 Aligned_cols=63 Identities=10% Similarity=-0.012 Sum_probs=53.7
Q ss_pred CcHHHHHHHHHHHHhC-C-CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 023753 188 GSSSTDAYYEKMIEAN-P-GNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADL 251 (277)
Q Consensus 188 d~deAi~~yekALeld-P-~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~l 251 (277)
+..+++..++..+..+ | ..-..++.+|..++ +.|+|++|..+++.+|+++|+|..|......+
T Consensus 53 d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~y-klg~Y~~A~~~~~~lL~~eP~n~QA~~Lk~~i 117 (126)
T 1nzn_A 53 DIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNY-RLKEYEKALKYVRGLLQTEPQNNQAKELERLI 117 (126)
T ss_dssp HHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHH-HhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 3446999999999887 5 56788999999888 89999999999999999999999987765443
No 223
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=96.89 E-value=0.0041 Score=60.14 Aligned_cols=89 Identities=12% Similarity=0.128 Sum_probs=68.1
Q ss_pred HHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCC
Q 023753 179 NNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKD 258 (277)
Q Consensus 179 Y~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd 258 (277)
|.......++.+.|...|++| +..+....+|..+|.+-+...++.+.|...|+++++..|+++..+..++.+... .++
T Consensus 292 y~~~~~r~~~~~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~~~~~~yid~e~~-~~~ 369 (493)
T 2uy1_A 292 HLNYVLKKRGLELFRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDSTLLKEEFFLFLLR-IGD 369 (493)
T ss_dssp HHHHHHHHHCHHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTC
T ss_pred HHHHHHHcCCHHHHHHHHHHh-hCCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-cCC
Confidence 334444567789999999999 433335667777776655344579999999999999999999888888887777 888
Q ss_pred HHHHHHHHHHH
Q 023753 259 ASRAESYFDQA 269 (277)
Q Consensus 259 ~deAi~~yekA 269 (277)
.+.|...|+++
T Consensus 370 ~~~aR~l~er~ 380 (493)
T 2uy1_A 370 EENARALFKRL 380 (493)
T ss_dssp HHHHHHHHHHS
T ss_pred HHHHHHHHHHH
Confidence 88888888876
No 224
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=96.87 E-value=0.0061 Score=58.93 Aligned_cols=59 Identities=15% Similarity=0.067 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 023753 190 SSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYAD 250 (277)
Q Consensus 190 deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ 250 (277)
+.+...|++||...|.++.+|..|+.++. ..++.++|...|++|+.. |.+...+..++.
T Consensus 196 ~Rv~~~ye~al~~~p~~~~lW~~ya~~~~-~~~~~~~ar~i~erAi~~-P~~~~l~~~y~~ 254 (493)
T 2uy1_A 196 SRMHFIHNYILDSFYYAEEVYFFYSEYLI-GIGQKEKAKKVVERGIEM-SDGMFLSLYYGL 254 (493)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHH-CCSSHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhC-CCcHHHHHHHHh
Confidence 45678999999999999999999999886 789999999999999999 988765555444
No 225
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=96.78 E-value=0.0057 Score=59.63 Aligned_cols=79 Identities=8% Similarity=-0.096 Sum_probs=44.8
Q ss_pred CCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHH
Q 023753 186 NHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESY 265 (277)
Q Consensus 186 ~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~deAi~~ 265 (277)
.|++++|++.|++| +++.+|.....++. ..++++.|..+..+ |.. +|+-+..+..+|.. .|++++|+.+
T Consensus 161 Lg~yq~AVea~~KA-----~~~~~Wk~v~~aCv-~~~ef~lA~~~~l~-L~~---~ad~l~~lv~~Yek-~G~~eEai~l 229 (449)
T 1b89_A 161 LGEYQAAVDGARKA-----NSTRTWKEVCFACV-DGKEFRLAQMCGLH-IVV---HADELEELINYYQD-RGYFEELITM 229 (449)
T ss_dssp TTCHHHHHHHHHHH-----TCHHHHHHHHHHHH-HTTCHHHHHHTTTT-TTT---CHHHHHHHHHHHHH-TTCHHHHHHH
T ss_pred hccHHHHHHHHHHc-----CCchhHHHHHHHHH-HcCcHHHHHHHHHH-HHh---CHhhHHHHHHHHHH-CCCHHHHHHH
Confidence 34455555555554 24444444444443 34455555444443 112 22333345566766 8999999999
Q ss_pred HHHHHHhCCC
Q 023753 266 FDQAVKSAPD 275 (277)
Q Consensus 266 yekALeldPd 275 (277)
|++++.+++.
T Consensus 230 Le~aL~le~a 239 (449)
T 1b89_A 230 LEAALGLERA 239 (449)
T ss_dssp HHHHTTSTTC
T ss_pred HHHHhCCcHH
Confidence 9999988864
No 226
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=96.66 E-value=0.005 Score=50.90 Aligned_cols=64 Identities=6% Similarity=-0.023 Sum_probs=55.5
Q ss_pred CCcHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 023753 187 HGSSSTDAYYEKMIEANPGN-ALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADL 251 (277)
Q Consensus 187 Gd~deAi~~yekALeldP~n-~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~l 251 (277)
.+..+++..++..++.+|.. -..++.+|..++ +.|+|++|..+++++++++|+|..|......+
T Consensus 57 ~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~y-klgdY~~Ar~y~d~lL~~eP~N~QA~~Lk~~I 121 (134)
T 3o48_A 57 NDERLGVKILTDIYKEAESRRRECLYYLTIGCY-KLGEYSMAKRYVDTLFEHERNNKQVGALKSMV 121 (134)
T ss_dssp HHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHTTCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHH-HhhhHHHHHHHHHHHHhhCCCCHHHHHHHHHH
Confidence 35568999999999999954 688999998888 89999999999999999999999987765544
No 227
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=96.65 E-value=0.0073 Score=50.50 Aligned_cols=64 Identities=6% Similarity=-0.023 Sum_probs=55.2
Q ss_pred CCcHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 023753 187 HGSSSTDAYYEKMIEANPG-NALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADL 251 (277)
Q Consensus 187 Gd~deAi~~yekALeldP~-n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~l 251 (277)
.+..+++..++..+..+|. .-..++.+|..++ +.++|.+|..|++.+++++|+|.++......+
T Consensus 56 ~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~y-kl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk~~I 120 (144)
T 1y8m_A 56 NDERLGVKILTDIYKEAESRRRECLYYLTIGCY-KLGEYSMAKRYVDTLFEHERNNKQVGALKSMV 120 (144)
T ss_dssp HHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCccchhHHHHHHHHHHH-HhhhHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 4556899999999999995 4678889998888 89999999999999999999999987655443
No 228
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=96.62 E-value=0.024 Score=51.98 Aligned_cols=90 Identities=19% Similarity=0.151 Sum_probs=75.0
Q ss_pred HhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH--------------
Q 023753 184 NNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYA-------------- 249 (277)
Q Consensus 184 e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA-------------- 249 (277)
...+++++|++.++..|+.+|.|+.....|..+|. ..|++++|...++.+.+++|........|-
T Consensus 8 l~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLc-v~G~w~RA~~QL~~~a~l~p~~~~~a~~yr~lI~aE~~R~~vfa 86 (273)
T 1zbp_A 8 LSEGQLQQALELLIEAIKASPKDASLRSSFIELLC-IDGDFERADEQLMQSIKLFPEYLPGASQLRHLVKAAQARKDFAQ 86 (273)
T ss_dssp TTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHhCchhhHHHHHHHHHHHHHHHHHHHHc
Confidence 34689999999999999999999999999999998 799999999999999999998755433321
Q ss_pred ---------------------HHHHHHcCCHHHHHHHHHHHHHhCCC
Q 023753 250 ---------------------DLIWQAHKDASRAESYFDQAVKSAPD 275 (277)
Q Consensus 250 ---------------------~ll~~~~Gd~deAi~~yekALeldPd 275 (277)
..... .|+.++|...-.+|++..|.
T Consensus 87 G~~~P~~~g~~~~w~~~ll~Al~~~~-~G~~~~A~~lr~~A~e~ap~ 132 (273)
T 1zbp_A 87 GAATAKVLGENEELTKSLVSFNLSMV-SQDYEQVSELALQIEELRQE 132 (273)
T ss_dssp SCCCEECCCSCHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHCCC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHhh-cCCHHHHHHHHHHHHhcCcc
Confidence 22222 58899999999999988875
No 229
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=96.46 E-value=0.0015 Score=63.61 Aligned_cols=72 Identities=13% Similarity=0.041 Sum_probs=58.8
Q ss_pred HHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHH
Q 023753 182 YSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASR 261 (277)
Q Consensus 182 m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~de 261 (277)
.+...|.+++|..+|.++ ..|..+|.+|. ..|+|++|+++|++| +++.+|.....++.. .++++.
T Consensus 131 ~~~~~g~yeeA~~~Y~~a--------~n~~~LA~~L~-~Lg~yq~AVea~~KA-----~~~~~Wk~v~~aCv~-~~ef~l 195 (449)
T 1b89_A 131 RCYDEKMYDAAKLLYNNV--------SNFGRLASTLV-HLGEYQAAVDGARKA-----NSTRTWKEVCFACVD-GKEFRL 195 (449)
T ss_dssp ------CTTTHHHHHHHT--------TCHHHHHHHHH-TTTCHHHHHHHHHHH-----TCHHHHHHHHHHHHH-TTCHHH
T ss_pred HHHHcCCHHHHHHHHHHh--------hhHHHHHHHHH-HhccHHHHHHHHHHc-----CCchhHHHHHHHHHH-cCcHHH
Confidence 344569999999999988 46788999997 899999999999999 588999999999999 999999
Q ss_pred HHHHHHH
Q 023753 262 AESYFDQ 268 (277)
Q Consensus 262 Ai~~yek 268 (277)
|..+..+
T Consensus 196 A~~~~l~ 202 (449)
T 1b89_A 196 AQMCGLH 202 (449)
T ss_dssp HHHTTTT
T ss_pred HHHHHHH
Confidence 9866553
No 230
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=96.10 E-value=0.036 Score=52.03 Aligned_cols=84 Identities=7% Similarity=-0.024 Sum_probs=67.8
Q ss_pred CCCcHHHHHHHHHHHHhCCCCH--------H--------------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q 023753 186 NHGSSSTDAYYEKMIEANPGNA--------L--------------LLGNYARFLKEVRGDFAKAEELCGRAILANPSDGN 243 (277)
Q Consensus 186 ~Gd~deAi~~yekALeldP~n~--------~--------------al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~ 243 (277)
.++.+.|...|++|+.+-...+ + ++..++..+. ..|++.+|+..+++++..+|-+-.
T Consensus 128 ~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l-~~g~~~~a~~~l~~~~~~~P~~E~ 206 (388)
T 2ff4_A 128 AGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEI-ACGRASAVIAELEALTFEHPYREP 206 (388)
T ss_dssp TTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCHH
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHhCCCCHH
Confidence 4788899999999999853321 1 2223334343 679999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 023753 244 ILSLYADLIWQAHKDASRAESYFDQAVK 271 (277)
Q Consensus 244 al~~LA~ll~~~~Gd~deAi~~yekALe 271 (277)
++..+-.+|+. .|+..+|+..|+++.+
T Consensus 207 ~~~~lm~al~~-~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 207 LWTQLITAYYL-SDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHHHHHHHT-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 99999999998 9999999999998754
No 231
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=95.90 E-value=0.022 Score=58.73 Aligned_cols=58 Identities=17% Similarity=0.094 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 023753 209 LLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQ 268 (277)
Q Consensus 209 al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~deAi~~yek 268 (277)
.+..-+.+|. .+++|+-|+++.++|+...|.+...|+.||.+|.. ++||+.|+-.+.-
T Consensus 339 LL~~Qa~FLl-~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~-l~d~e~ALLtLNS 396 (754)
T 4gns_B 339 LLNIQTNFLL-NRGDYELALGVSNTSTELALDSFESWYNLARCHIK-KEEYEKALFAINS 396 (754)
T ss_dssp HHHHHHHHHH-HTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHh-ccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHH-hccHHHHHHHHhc
Confidence 4555577776 78999999999999999999999999999999999 9999999976654
No 232
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=95.84 E-value=0.027 Score=55.30 Aligned_cols=76 Identities=13% Similarity=0.134 Sum_probs=64.3
Q ss_pred hHHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 023753 178 SNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQ 254 (277)
Q Consensus 178 yY~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~ 254 (277)
+.+.+..-...+..|..+|++|+.++|++...++.+|.+.. ..++.-+|+-||-|++....-.+.+..++..++-.
T Consensus 157 ~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~-~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f~~ 232 (497)
T 1ya0_A 157 HLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILAS-SKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSK 232 (497)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHH-HTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHHH
T ss_pred HcccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHh-cccccHHHHHHHHHHHhcCCCChhHHHHHHHHHHH
Confidence 45555555677889999999999999999999999998776 68899999999999999887788888888776654
No 233
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=95.59 E-value=0.15 Score=49.43 Aligned_cols=89 Identities=12% Similarity=0.055 Sum_probs=70.1
Q ss_pred HHHHhCCCcHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHcC
Q 023753 181 NYSNNNHGSSSTDAYYEKMIEAN--PGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPS-DGNILSLYADLIWQAHK 257 (277)
Q Consensus 181 ~m~e~~Gd~deAi~~yekALeld--P~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~-n~~al~~LA~ll~~~~G 257 (277)
.++...|++++|...|+++.+.. | |...|+.+-..|. ..|+.++|.+.|++..+..-. |...|..+-.+|.. .|
T Consensus 113 ~~~~~~g~~~~A~~l~~~M~~~g~~P-d~~tyn~lI~~~~-~~g~~~~A~~l~~~M~~~G~~Pd~~ty~~Li~~~~~-~g 189 (501)
T 4g26_A 113 RLAVAKDDPEMAFDMVKQMKAFGIQP-RLRSYGPALFGFC-RKGDADKAYEVDAHMVESEVVPEEPELAALLKVSMD-TK 189 (501)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHH-TT
T ss_pred HHHHhcCCHHHHHHHHHHHHHcCCCC-ccceehHHHHHHH-HCCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhh-CC
Confidence 44555699999999999998863 4 5666666666676 789999999999998876432 56677778888888 99
Q ss_pred CHHHHHHHHHHHHHh
Q 023753 258 DASRAESYFDQAVKS 272 (277)
Q Consensus 258 d~deAi~~yekALel 272 (277)
+.++|.++|++..+.
T Consensus 190 ~~d~A~~ll~~Mr~~ 204 (501)
T 4g26_A 190 NADKVYKTLQRLRDL 204 (501)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHh
Confidence 999999999987653
No 234
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=95.27 E-value=0.028 Score=48.03 Aligned_cols=62 Identities=16% Similarity=0.181 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH---------HHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 023753 209 LLGNYARFLKEVRGDFAKAEELCGRAILANPSDGN---------ILSLYADLIWQAHKDASRAESYFDQAVKS 272 (277)
Q Consensus 209 al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~---------al~~LA~ll~~~~Gd~deAi~~yekALel 272 (277)
+++.-...++ ..+.|+.|+.....++.+..++++ ++..+|.+++. .++|.+|+.+|++||+.
T Consensus 22 ~l~dqik~L~-d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~-~~eyrrA~~~y~qALq~ 92 (167)
T 3ffl_A 22 NVIDHVRDMA-AAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFH-DKEYRNAVSKYTMALQQ 92 (167)
T ss_dssp CHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-HhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHc-ccHHHHHHHHHHHHHHH
Confidence 3444444555 578999999999998777654444 78899999999 99999999999999865
No 235
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=95.15 E-value=0.059 Score=52.91 Aligned_cols=62 Identities=19% Similarity=0.191 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 023753 209 LLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQAVKS 272 (277)
Q Consensus 209 al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~deAi~~yekALel 272 (277)
.+..+|.+.. ....+..|..+|.+|+.++|++...++.+|.+... .++.-+|+-+|-+++..
T Consensus 154 ~l~~LGDL~R-Y~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~-~~~~l~a~y~y~rsl~~ 215 (497)
T 1ya0_A 154 CLVHLGDIAR-YRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASS-KGDHLTTIFYYCRSIAV 215 (497)
T ss_dssp HHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHH-TTCHHHHHHHHHHHHSS
T ss_pred HHHHcccHHH-HHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhc-ccccHHHHHHHHHHHhc
Confidence 4567787665 67889999999999999999999999999999988 99999999999999864
No 236
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=94.70 E-value=0.13 Score=43.62 Aligned_cols=61 Identities=15% Similarity=0.212 Sum_probs=55.0
Q ss_pred hCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHH
Q 023753 185 NNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILS 246 (277)
Q Consensus 185 ~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~ 246 (277)
..+|.++|...|+.|+.+....+.+|..+|.+-. .+++..+|...+.+|+.+.|...+.+.
T Consensus 72 ei~D~d~aR~vy~~a~~~hKkFAKiwi~~AqFEi-Rqgnl~kARkILg~AiG~~~k~~~~le 132 (161)
T 4h7y_A 72 AIQEPDDARDYFQMARANCKKFAFVHISFAQFEL-SQGNVKKSKQLLQKAVERGAVPLEMLE 132 (161)
T ss_dssp HHHCGGGCHHHHHHHHHHCTTBHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHTTCBCHHHHH
T ss_pred HhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH-HcccHHHHHHHHHHHhccCCCcHHHHH
Confidence 3379999999999999998889999999999886 899999999999999999999877553
No 237
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=94.37 E-value=0.3 Score=47.27 Aligned_cols=84 Identities=18% Similarity=0.039 Sum_probs=67.8
Q ss_pred CCcHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHHcCCHHHHHH
Q 023753 187 HGSSSTDAYYEKMIEANP-GNALLLGNYARFLKEVRGDFAKAEELCGRAILANP-SDGNILSLYADLIWQAHKDASRAES 264 (277)
Q Consensus 187 Gd~deAi~~yekALeldP-~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP-~n~~al~~LA~ll~~~~Gd~deAi~ 264 (277)
+++++|...|+++.+..- -|...+..+...|. +.|++++|++.|++..+..- -|...|..+-..|.. .|+.++|.+
T Consensus 84 ~~l~~A~~lf~~M~~~G~~Pd~~tyn~lI~~~~-~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~-~g~~~~A~~ 161 (501)
T 4g26_A 84 PGLSRGFDIFKQMIVDKVVPNEATFTNGARLAV-AKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCR-KGDADKAYE 161 (501)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHH-TTCHHHHHH
T ss_pred chHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHH-CCCHHHHHH
Confidence 457899999999988642 26677777777786 79999999999999887642 266677777777888 999999999
Q ss_pred HHHHHHHh
Q 023753 265 YFDQAVKS 272 (277)
Q Consensus 265 ~yekALel 272 (277)
+|++..+.
T Consensus 162 l~~~M~~~ 169 (501)
T 4g26_A 162 VDAHMVES 169 (501)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHhc
Confidence 99998764
No 238
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=94.13 E-value=0.11 Score=47.42 Aligned_cols=55 Identities=31% Similarity=0.425 Sum_probs=52.6
Q ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 023753 220 VRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPD 275 (277)
Q Consensus 220 ~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~deAi~~yekALeldPd 275 (277)
..+++++|++.+...|+.+|.|+.....|..+|.- .|++++|.+.++.+.+++|+
T Consensus 9 ~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv-~G~w~RA~~QL~~~a~l~p~ 63 (273)
T 1zbp_A 9 SEGQLQQALELLIEAIKASPKDASLRSSFIELLCI-DGDFERADEQLMQSIKLFPE 63 (273)
T ss_dssp TTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHCGG
T ss_pred hCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHh-cCCHHHHHHHHHHHHHhCch
Confidence 57999999999999999999999999999999988 99999999999999999996
No 239
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=93.99 E-value=0.21 Score=48.68 Aligned_cols=65 Identities=14% Similarity=-0.003 Sum_probs=42.6
Q ss_pred CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHH--------HHhCCCCHHHHHHHHHHHHH------------HcCCHHHH
Q 023753 203 NPGNALLLGNYARFLKEVRGDFAKAEELCGRA--------ILANPSDGNILSLYADLIWQ------------AHKDASRA 262 (277)
Q Consensus 203 dP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekA--------LeldP~n~~al~~LA~ll~~------------~~Gd~deA 262 (277)
..+++..|.++|..+. ..++++.|+++|.++ |.....+...+..++.+... ..|++++|
T Consensus 677 ~~~~~~~W~~la~~al-~~~~~~~A~~~y~~~~d~~~l~~l~~~~~~~~~~~~~~~~a~~~~~~~~A~~~~~~~g~~~~a 755 (814)
T 3mkq_A 677 DESAEMKWRALGDASL-QRFNFKLAIEAFTNAHDLESLFLLHSSFNNKEGLVTLAKDAETTGKFNLAFNAYWIAGDIQGA 755 (814)
T ss_dssp TCCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHH
T ss_pred hhCcHhHHHHHHHHHH-HcCCHHHHHHHHHHccChhhhHHHHHHcCCHHHHHHHHHHHHHcCchHHHHHHHHHcCCHHHH
Confidence 4567899999999885 899999999999986 22224444544444333322 15666666
Q ss_pred HHHHHH
Q 023753 263 ESYFDQ 268 (277)
Q Consensus 263 i~~yek 268 (277)
+++|.+
T Consensus 756 ~~~~~~ 761 (814)
T 3mkq_A 756 KDLLIK 761 (814)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666544
No 240
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=93.37 E-value=1.1 Score=39.19 Aligned_cols=93 Identities=12% Similarity=-0.022 Sum_probs=65.5
Q ss_pred chhhHHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHH--Hh---------------
Q 023753 175 FSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAI--LA--------------- 237 (277)
Q Consensus 175 ~~~yY~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekAL--el--------------- 237 (277)
+...+.-++.-+|.+..|+-++- +-+-..+.+--+.+|. ..+||.+|+.+++..+ ++
T Consensus 35 Y~lL~~I~LyyngEY~R~Lf~L~-----~lNT~Ts~YYk~LCy~-klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffv 108 (242)
T 3kae_A 35 YRMLMSIVLYLNGEYTRALFHLH-----KLNTCTSKYYESLCYK-KKKDYKKAIKSLESILEGKVERDPDVDARIQEMFV 108 (242)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHH-----TCCBHHHHHHHHHHHH-HTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSC
T ss_pred HHhhhhhhhhhcchHhHHHHHHH-----hcchHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhcccccCcccccccceeee
Confidence 34445555566677777665543 2233444444455666 8899999999999999 22
Q ss_pred CCCCHHH-HHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 023753 238 NPSDGNI-LSLYADLIWQAHKDASRAESYFDQAVKSAP 274 (277)
Q Consensus 238 dP~n~~a-l~~LA~ll~~~~Gd~deAi~~yekALeldP 274 (277)
||.|.+. +..+|.++-+ .++.++|+.+|.+.....|
T Consensus 109 d~~DkEfFy~l~a~lltq-~g~r~EaI~y~~~Sf~~~~ 145 (242)
T 3kae_A 109 DPGDEEFFESLLGDLCTL-SGYREEGIGHYVRSFGKSF 145 (242)
T ss_dssp CTTCHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCC
T ss_pred ccchHHHHHHHHHHHHHH-hcCHHHhhhHhhhhcCCcc
Confidence 4566665 5567888888 9999999999999887765
No 241
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=91.86 E-value=1.9 Score=36.85 Aligned_cols=48 Identities=8% Similarity=0.047 Sum_probs=39.7
Q ss_pred HHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 023753 181 NYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRA 234 (277)
Q Consensus 181 ~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekA 234 (277)
.+....|+++.|.+..+.. ++...|..+|.... ..++++-|+++|+++
T Consensus 13 ~LAL~lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL-~~gn~~lAe~cy~~~ 60 (177)
T 3mkq_B 13 DLALEYGNLDAALDEAKKL-----NDSITWERLIQEAL-AQGNASLAEMIYQTQ 60 (177)
T ss_dssp HHHHHTTCHHHHHHHHHHH-----CCHHHHHHHHHHHH-HTTCHHHHHHHHHHT
T ss_pred HHHHhcCCHHHHHHHHHHh-----CCHHHHHHHHHHHH-HcCChHHHHHHHHHh
Confidence 3445568999999887765 67889999999775 799999999999886
No 242
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=91.09 E-value=0.41 Score=49.35 Aligned_cols=95 Identities=11% Similarity=0.131 Sum_probs=64.5
Q ss_pred HHHhCCC-cHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHh--------CCCC----------
Q 023753 182 YSNNNHG-SSSTDAYYEKMIEANPGNALLLGNYARFLKEVR-GDFAKAEELCGRAILA--------NPSD---------- 241 (277)
Q Consensus 182 m~e~~Gd-~deAi~~yekALeldP~n~~al~nLA~lL~e~~-Gd~eeA~e~~ekALel--------dP~n---------- 241 (277)
++...++ ++.|+.++++..+.+|.+...+........+.. .+--+|++.+.++++. .+.+
T Consensus 257 ~~~~t~~~~~~a~~~le~L~~~~p~~~~~~~~~~i~~~~~~~~~Ev~av~ll~~~l~~~~~~~~~l~~~~~~~~~~~~~~ 336 (754)
T 4gns_B 257 FIAITPSLVDFTIDYLKGLTKKDPIHDIYYKTAMITILDHIETKELDMITILNETLDPLLSLLNDLPPRDADSARLMNCM 336 (754)
T ss_dssp HHHTCGGGHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHH
T ss_pred HHcccccHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhcccccccccccCcc
Confidence 3334555 578999999999999987644332111111112 2345788888887742 3333
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCC
Q 023753 242 GNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDW 277 (277)
Q Consensus 242 ~~al~~LA~ll~~~~Gd~deAi~~yekALeldPdD~ 277 (277)
...+..-+.++.. +++|+-|+++-++|+.+.|.+|
T Consensus 337 ~~LL~~Qa~FLl~-K~~~elAL~~Ak~AV~~aPseF 371 (754)
T 4gns_B 337 SDLLNIQTNFLLN-RGDYELALGVSNTSTELALDSF 371 (754)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCSSCH
T ss_pred hHHHHHHHHHHhc-cCcHHHHHHHHHHHHhcCchhh
Confidence 2345556888888 9999999999999999999875
No 243
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=91.00 E-value=0.66 Score=43.31 Aligned_cols=53 Identities=13% Similarity=-0.042 Sum_probs=47.4
Q ss_pred HHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 023753 183 SNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAIL 236 (277)
Q Consensus 183 ~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALe 236 (277)
+...|++++|+..+++++..+|-+-.+|..+-.+|+ ..|+..+|++.|+++-.
T Consensus 181 ~l~~g~~~~a~~~l~~~~~~~P~~E~~~~~lm~al~-~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 181 EIACGRASAVIAELEALTFEHPYREPLWTQLITAYY-LSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH-TTTCHHHHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHH
Confidence 335799999999999999999999999999988887 89999999999998654
No 244
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=90.80 E-value=1.1 Score=42.37 Aligned_cols=93 Identities=10% Similarity=-0.012 Sum_probs=67.8
Q ss_pred hHHHHHHhCCCcHHHHHHHHHHHHhCCC--C-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCCHHH----HHHH
Q 023753 178 SNNNYSNNNHGSSSTDAYYEKMIEANPG--N-ALLLGNYARFLKEVRGDFAKAEELCGRAILAN--PSDGNI----LSLY 248 (277)
Q Consensus 178 yY~~m~e~~Gd~deAi~~yekALeldP~--n-~~al~nLA~lL~e~~Gd~eeA~e~~ekALeld--P~n~~a----l~~L 248 (277)
-++..+...|++++|.++|.++...-.. + ..++.....++. ..+|+..|..++.+|-.+- ..++.. ....
T Consensus 136 ~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l-~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~lk~~~ 214 (429)
T 4b4t_R 136 NLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGF-FYNDQLYVKEKLEAVNSMIEKGGDWERRNRYKTYY 214 (429)
T ss_dssp HHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHTTCCCTHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHH
Confidence 3556677789999999999999876433 2 456666666665 6899999999999987652 223332 3344
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHh
Q 023753 249 ADLIWQAHKDASRAESYFDQAVKS 272 (277)
Q Consensus 249 A~ll~~~~Gd~deAi~~yekALel 272 (277)
|.+++. .++|.+|..+|-.++.-
T Consensus 215 gl~~l~-~r~f~~Aa~~f~e~~~t 237 (429)
T 4b4t_R 215 GIHCLA-VRNFKEAAKLLVDSLAT 237 (429)
T ss_dssp HHGGGG-TSCHHHHHHHHHHHHHH
T ss_pred HHHHHH-hChHHHHHHHHHHHhcc
Confidence 555666 89999999999887654
No 245
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=90.30 E-value=1.8 Score=41.23 Aligned_cols=93 Identities=12% Similarity=-0.028 Sum_probs=65.9
Q ss_pred hHHHHHHhCCCcHHHHHHHHHHHHh--CCCC----HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC---CCCHHH----
Q 023753 178 SNNNYSNNNHGSSSTDAYYEKMIEA--NPGN----ALLLGNYARFLKEVRGDFAKAEELCGRAILAN---PSDGNI---- 244 (277)
Q Consensus 178 yY~~m~e~~Gd~deAi~~yekALel--dP~n----~~al~nLA~lL~e~~Gd~eeA~e~~ekALeld---P~n~~a---- 244 (277)
-...+|...++|.+|...+.+.++- ..++ .+++..-..++. ..+++.+|..+|.+|.... +.+|..
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~-~~~n~~k~k~~l~~a~~~~~ai~~~p~i~a~i 182 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYH-ALSNLPKARAALTSARTTANAIYCPPKVQGAL 182 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHH-HhccHHHHHHHHHHHHhhhccCCCCHHHHHHH
Confidence 3456778899999999999988873 1122 234555556676 7899999999999997664 233433
Q ss_pred HHHHHHHHH-HHcCCHHHHHHHHHHHHHh
Q 023753 245 LSLYADLIW-QAHKDASRAESYFDQAVKS 272 (277)
Q Consensus 245 l~~LA~ll~-~~~Gd~deAi~~yekALel 272 (277)
...-|.++. . .++|++|..+|-.+++.
T Consensus 183 ~~~~Gi~~l~~-~rdyk~A~~~F~eaf~~ 210 (394)
T 3txn_A 183 DLQSGILHAAD-ERDFKTAFSYFYEAFEG 210 (394)
T ss_dssp HHHHHHHHHHT-TSCHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHh-ccCHHHHHHHHHHHHhc
Confidence 223355555 5 89999999999988743
No 246
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=90.17 E-value=3.1 Score=39.60 Aligned_cols=94 Identities=9% Similarity=0.148 Sum_probs=68.4
Q ss_pred hhHHHHHHhCCCcHHHHHHHHHHHHh-C-CCC----HHHHHHHHHHHHHHcCCHHHHHHHHHHHHH---hCCCCHH----
Q 023753 177 GSNNNYSNNNHGSSSTDAYYEKMIEA-N-PGN----ALLLGNYARFLKEVRGDFAKAEELCGRAIL---ANPSDGN---- 243 (277)
Q Consensus 177 ~yY~~m~e~~Gd~deAi~~yekALel-d-P~n----~~al~nLA~lL~e~~Gd~eeA~e~~ekALe---ldP~n~~---- 243 (277)
..+..+++..|++.+|...+.....- . ..+ ..++.....++. ..+|+.+|..++.++-. -.+.++.
T Consensus 141 ~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l-~~~d~~~a~~~~~ki~~~~~~~~~~~~lk~~ 219 (445)
T 4b4t_P 141 KDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSI-LKGDYSQATVLSRKILKKTFKNPKYESLKLE 219 (445)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHSSCCHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHhhcccCCcHHHHHH
Confidence 34568888999999999999887532 1 122 345666667676 68999999999999742 3444443
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 023753 244 ILSLYADLIWQAHKDASRAESYFDQAVKS 272 (277)
Q Consensus 244 al~~LA~ll~~~~Gd~deAi~~yekALel 272 (277)
++...|.++.. .++|.+|-.+|..++..
T Consensus 220 ~~~~~~~~~~~-e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 220 YYNLLVKISLH-KREYLEVAQYLQEIYQT 247 (445)
T ss_dssp HHHHHHHHHHH-HCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-hhhHHHHHHHHHHHHhc
Confidence 45556777777 89999999999988753
No 247
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=88.19 E-value=3.3 Score=36.78 Aligned_cols=60 Identities=8% Similarity=-0.052 Sum_probs=47.2
Q ss_pred hHHHHHHh-CCCcHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 023753 178 SNNNYSNN-NHGSSSTDAYYEKMIEA-----NPGNA---LLLGNYARFLKEVRGDFAKAEELCGRAILA 237 (277)
Q Consensus 178 yY~~m~e~-~Gd~deAi~~yekALel-----dP~n~---~al~nLA~lL~e~~Gd~eeA~e~~ekALel 237 (277)
||+-+.+- .|+.+.|...|+.|+++ .|.+| ....|++.+|++..++.++|....++|+.+
T Consensus 129 YyRYlAE~~~g~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~ 197 (227)
T 2o8p_A 129 ISRYKLEFGLCSLEDSKKIHQDAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKI 197 (227)
T ss_dssp HHHHHHHTTSSCHHHHHHHHHHHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHccccHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 56655554 36788999999999874 45554 567788999999999999999999999774
No 248
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=87.23 E-value=2.5 Score=36.06 Aligned_cols=55 Identities=15% Similarity=0.088 Sum_probs=47.0
Q ss_pred CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 023753 205 GNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQA 269 (277)
Q Consensus 205 ~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~deAi~~yekA 269 (277)
.|+...+.+|. ..|+++.|.+..+++ ++...|..+|...+. +++++-|+.+|+++
T Consensus 6 ~D~~~rF~LAL----~lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~-~gn~~lAe~cy~~~ 60 (177)
T 3mkq_B 6 QDPHIRFDLAL----EYGNLDAALDEAKKL-----NDSITWERLIQEALA-QGNASLAEMIYQTQ 60 (177)
T ss_dssp SCHHHHHHHHH----HTTCHHHHHHHHHHH-----CCHHHHHHHHHHHHH-TTCHHHHHHHHHHT
T ss_pred CChHHHHHHHH----hcCCHHHHHHHHHHh-----CCHHHHHHHHHHHHH-cCChHHHHHHHHHh
Confidence 46677777763 579999999998765 788899999999999 99999999999885
No 249
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=86.64 E-value=1.9 Score=41.94 Aligned_cols=43 Identities=21% Similarity=0.129 Sum_probs=35.2
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 023753 221 RGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQA 269 (277)
Q Consensus 221 ~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~deAi~~yekA 269 (277)
.+++++|.++++ ..+++..|..+|..+.+ .++++.|+.+|.++
T Consensus 665 ~~~~~~A~~~~~-----~~~~~~~W~~la~~al~-~~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 665 VGQLTLARDLLT-----DESAEMKWRALGDASLQ-RFNFKLAIEAFTNA 707 (814)
T ss_dssp HTCHHHHHHHHT-----TCCCHHHHHHHHHHHHH-TTCHHHHHHHHHHH
T ss_pred cCCHHHHHHHHH-----hhCcHhHHHHHHHHHHH-cCCHHHHHHHHHHc
Confidence 566666666543 34688999999999999 99999999999986
No 250
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=86.18 E-value=1.2 Score=44.01 Aligned_cols=66 Identities=20% Similarity=0.277 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 023753 207 ALLLGNYARFLKEVRGDFAKAEELCGRAILANPSD-------GNILSLYADLIWQAHKDASRAESYFDQAVKSAPDD 276 (277)
Q Consensus 207 ~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n-------~~al~~LA~ll~~~~Gd~deAi~~yekALeldPdD 276 (277)
+..++.+-+.|. ..+.|+.|..+..++. .|.. ..+++++|.++.. +.+|.+|.++|..|+...|.+
T Consensus 231 a~l~nllLRnYL-~~~~y~qA~~lvsk~~--fP~~~~sn~q~~rY~YY~GRI~a~-q~~Y~eA~~~L~~A~rkap~~ 303 (523)
T 4b4t_S 231 AMLINLILRDFL-NNGEVDSASDFISKLE--YPHTDVSSSLEARYFFYLSKINAI-QLDYSTANEYIIAAIRKAPHN 303 (523)
T ss_dssp HHHHHHHHHHHH-HSSCSTTHHHHHHHHC--SCTTTSCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHTSSCSCS
T ss_pred HHHHHHHHHHHH-ccCcHHHHHHHHhcCc--CCcccCCHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHhCCcc
Confidence 344555556564 7899999999999995 4432 4567788999988 999999999999999988754
No 251
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=85.09 E-value=9 Score=41.23 Aligned_cols=87 Identities=9% Similarity=-0.090 Sum_probs=67.2
Q ss_pred HHHhCCCcHHHHHHHHHHHH-----hCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHH
Q 023753 182 YSNNNHGSSSTDAYYEKMIE-----ANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILAN--PSDGNILSLYADLIWQ 254 (277)
Q Consensus 182 m~e~~Gd~deAi~~yekALe-----ldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeld--P~n~~al~~LA~ll~~ 254 (277)
.+-..|+.++|...|+++.+ ..| |...|+.+-..|. +.|++++|.+.|++..+.. | |...|..+-.++..
T Consensus 136 glcK~G~leeA~~Lf~eM~~m~~kG~~P-dvvTYNtLI~Glc-k~G~~~eA~~Lf~eM~~~G~~P-DvvTYntLI~glcK 212 (1134)
T 3spa_A 136 CCLLTDQLPLAHHLLVVHHGQRQKRKLL-TLDMYNAVMLGWA-RQGAFKELVYVLFMVKDAGLTP-DLLSYAAALQCMGR 212 (1134)
T ss_dssp HHHHHTCHHHHHHHHHHHHHSHHHHTTC-CHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHHHH
T ss_pred HHHhCCCHHHHHHHHHHHHHHhhcCCCC-CHhHHHHHHHHHH-hCCCHHHHHHHHHHHHHcCCCC-cHHHHHHHHHHHHh
Confidence 34446999999999987653 345 5677777777777 7999999999999998754 4 56667777777777
Q ss_pred HcCC-HHHHHHHHHHHHHh
Q 023753 255 AHKD-ASRAESYFDQAVKS 272 (277)
Q Consensus 255 ~~Gd-~deAi~~yekALel 272 (277)
.|+ .++|.++|++..+.
T Consensus 213 -~G~~~e~A~~Ll~EM~~k 230 (1134)
T 3spa_A 213 -QDQDAGTIERCLEQMSQE 230 (1134)
T ss_dssp -HTCCHHHHHHHHHHHHHH
T ss_pred -CCCcHHHHHHHHHHHHHc
Confidence 676 57899999988764
No 252
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=83.89 E-value=5.7 Score=34.60 Aligned_cols=77 Identities=9% Similarity=0.096 Sum_probs=57.4
Q ss_pred HHHHHHHHh---------CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHHcCCHHHH
Q 023753 194 AYYEKMIEA---------NPGNALLLGNYARFLKEVRGDFAKAEELCGRAILAN--PSDGNILSLYADLIWQAHKDASRA 262 (277)
Q Consensus 194 ~~yekALel---------dP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeld--P~n~~al~~LA~ll~~~~Gd~deA 262 (277)
..++++++. ||....+|..|+.++ ...+...+.+.|.-..... -..+..|..+|.++.. .|++++|
T Consensus 58 ~lLErc~~~F~~~~rYkND~RYLklWl~Ya~~~--~~~~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~-~g~~~~A 134 (202)
T 3esl_A 58 STMERCLIYIQDMETYRNDPRFLKIWIWYINLF--LSNNFHESENTFKYMFNKGIGTKLSLFYEEFSKLLEN-AQFFLEA 134 (202)
T ss_dssp HHHHHHHHHHTTCGGGTTCHHHHHHHHHHHHHH--STTCHHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHHH-TTCHHHH
T ss_pred HHHHHHHHHhcccccccCCHHHHHHHHHHHHhh--cccccCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHH-cCCHHHH
Confidence 567777774 333345666666643 1455778888888877755 4678888889998888 9999999
Q ss_pred HHHHHHHHHhC
Q 023753 263 ESYFDQAVKSA 273 (277)
Q Consensus 263 i~~yekALeld 273 (277)
.+.|+.+|+..
T Consensus 135 ~~Vy~~GI~~~ 145 (202)
T 3esl_A 135 KVLLELGAENN 145 (202)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHcC
Confidence 99999999864
No 253
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=83.20 E-value=22 Score=31.02 Aligned_cols=69 Identities=10% Similarity=0.023 Sum_probs=51.0
Q ss_pred CCcchhhHHHHHH-hCCCcHHHHHHHHHHHH--h---------------CCCCHHH-HHHHHHHHHHHcCCHHHHHHHHH
Q 023753 172 GSGFSGSNNNYSN-NNHGSSSTDAYYEKMIE--A---------------NPGNALL-LGNYARFLKEVRGDFAKAEELCG 232 (277)
Q Consensus 172 ~~~~~~yY~~m~e-~~Gd~deAi~~yekALe--l---------------dP~n~~a-l~nLA~lL~e~~Gd~eeA~e~~e 232 (277)
+.++..||..+.. ...++.+|+..+++.|+ + ||.+-+. +..+|.++. +.++.++|+.+|.
T Consensus 60 NT~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy~l~a~llt-q~g~r~EaI~y~~ 138 (242)
T 3kae_A 60 NTCTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDEEFFESLLGDLCT-LSGYREEGIGHYV 138 (242)
T ss_dssp CBHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHHHHHHHHHHHHH-HTTCHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccceeeeccchHHHHHHHHHHHHH-HhcCHHHhhhHhh
Confidence 3455667775543 45899999999999992 2 3555544 556787776 8999999999999
Q ss_pred HHHHhCCCC
Q 023753 233 RAILANPSD 241 (277)
Q Consensus 233 kALeldP~n 241 (277)
......|-.
T Consensus 139 ~Sf~~~~lf 147 (242)
T 3kae_A 139 RSFGKSFLF 147 (242)
T ss_dssp HHHHHCCCH
T ss_pred hhcCCcccc
Confidence 888776643
No 254
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=81.73 E-value=6.2 Score=35.14 Aligned_cols=47 Identities=21% Similarity=0.309 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHH-----hCCCCHH---HHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 023753 190 SSTDAYYEKMIE-----ANPGNAL---LLGNYARFLKEVRGDFAKAEELCGRAIL 236 (277)
Q Consensus 190 deAi~~yekALe-----ldP~n~~---al~nLA~lL~e~~Gd~eeA~e~~ekALe 236 (277)
+.|...|++|++ +.|.+|. ...|++.+|++..++.++|....++|+.
T Consensus 150 e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd 204 (236)
T 3iqu_A 150 DSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFD 204 (236)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 467888888865 5788874 4557888888888999998887777654
No 255
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=79.92 E-value=5.6 Score=39.81 Aligned_cols=80 Identities=14% Similarity=0.147 Sum_probs=59.3
Q ss_pred cHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 023753 189 SSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQ 268 (277)
Q Consensus 189 ~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~deAi~~yek 268 (277)
..++...+.+++....++..........+ ..+|++.|..+|++.-......+...+.+|.++.. .|+.++|..+|++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~e~~~r~Al--r~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~-~g~~~~a~~~~~~ 344 (618)
T 1qsa_A 268 TDEQAKWRDDAIMRSQSTSLIERRVRMAL--GTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLE-RGREAEAKEILHQ 344 (618)
T ss_dssp CHHHHHHHHHHHHTCCCHHHHHHHHHHHH--HHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred ChHHHHHHHhccccCCChHHHHHHHHHHH--HCCCHHHHHHHHHHccccccccHhHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 56788888887665544443333333333 46999999999987665444678888999998888 9999999999999
Q ss_pred HHH
Q 023753 269 AVK 271 (277)
Q Consensus 269 ALe 271 (277)
+.+
T Consensus 345 ~a~ 347 (618)
T 1qsa_A 345 LMQ 347 (618)
T ss_dssp HHT
T ss_pred Hhc
Confidence 875
No 256
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=77.90 E-value=7.3 Score=41.28 Aligned_cols=75 Identities=11% Similarity=-0.070 Sum_probs=56.0
Q ss_pred HHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----------------------CCCCHHHHHHHHHHHHHH
Q 023753 199 MIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILA-----------------------NPSDGNILSLYADLIWQA 255 (277)
Q Consensus 199 ALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALel-----------------------dP~n~~al~~LA~ll~~~ 255 (277)
.+..-|.++...+.+|.++. ..|++++|.++|++|..- ...-+.+|+....++.+
T Consensus 834 l~~~~~~~~~~~yl~g~~~L-~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~- 911 (1139)
T 4fhn_B 834 LIGWLNSDPIAVYLKALIYL-KSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFE- 911 (1139)
T ss_dssp HHHHSCCCHHHHHHHHHHHH-HTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHH-
T ss_pred HhhhccCCcHHHHHHHHHHH-hcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHH-
Confidence 44567888888899999887 899999999999987321 11123455556666656
Q ss_pred cCCHHHHHHHHHHHHHhCCC
Q 023753 256 HKDASRAESYFDQAVKSAPD 275 (277)
Q Consensus 256 ~Gd~deAi~~yekALeldPd 275 (277)
.+.++.|+++.+.||+..+.
T Consensus 912 ~~~~~~vi~fa~lAi~~~~~ 931 (1139)
T 4fhn_B 912 ESAYIDALEFSLLADASKET 931 (1139)
T ss_dssp TSCCHHHHHHHHHHHHHCCS
T ss_pred cCCHHHHHHHHHHHHHhccC
Confidence 89999999999999987654
No 257
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=76.95 E-value=6.2 Score=35.04 Aligned_cols=47 Identities=19% Similarity=0.224 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHH-----hCCCCHH---HHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 023753 190 SSTDAYYEKMIE-----ANPGNAL---LLGNYARFLKEVRGDFAKAEELCGRAIL 236 (277)
Q Consensus 190 deAi~~yekALe-----ldP~n~~---al~nLA~lL~e~~Gd~eeA~e~~ekALe 236 (277)
++|..+|++|++ +.|.+|. ...|++.+|++..++.++|....++|+.
T Consensus 147 e~a~~aY~~A~~iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd 201 (234)
T 2br9_A 147 ENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 201 (234)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 467888888874 5788874 4557888888888999999888887765
No 258
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=76.32 E-value=15 Score=30.92 Aligned_cols=80 Identities=21% Similarity=0.109 Sum_probs=55.2
Q ss_pred CCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Q 023753 187 HGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYF 266 (277)
Q Consensus 187 Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~deAi~~y 266 (277)
++...-+.+|-++ +-.+-. +++|.-+.-.++..++-.+.+...+.-++-+|..+.-+|.+|-. .|+..+|.+++
T Consensus 75 ~NlKrVi~C~~~~---n~~se~--vd~ALd~lv~~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~K-lg~~r~a~eLl 148 (172)
T 1wy6_A 75 QNLKSVVECGVIN---NTLNEH--VNKALDILVIQGKRDKLEEIGREILKNNEVSASILVAIANALRR-VGDERDATTLL 148 (172)
T ss_dssp SCTHHHHHHHHHT---TCCCHH--HHHHHHHHHHTTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred hcHHHHHHHHHHh---cchHHH--HHHHHHHHHHhccHhHHHHHHHHHhccCCCChHHHHHHHHHHHH-hcchhhHHHHH
Confidence 4566666776543 444433 33443222367888888888888777777789999999999988 99999999999
Q ss_pred HHHHHh
Q 023753 267 DQAVKS 272 (277)
Q Consensus 267 ekALel 272 (277)
.+|-+.
T Consensus 149 ~~AC~k 154 (172)
T 1wy6_A 149 IEACKK 154 (172)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 888653
No 259
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=76.25 E-value=5.8 Score=41.44 Aligned_cols=76 Identities=11% Similarity=-0.032 Sum_probs=56.7
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---------------------CCCC--HHHHHHHHHHHH
Q 023753 197 EKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILA---------------------NPSD--GNILSLYADLIW 253 (277)
Q Consensus 197 ekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALel---------------------dP~n--~~al~~LA~ll~ 253 (277)
+..+..-|.++..-|.+|.++. ..|++++|.++|++|..- .++. ..+|.....++-
T Consensus 830 ~eL~~~~~~t~~~~yv~gr~~L-~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e~~~~~~~YY~hV~~LFE 908 (950)
T 4gq2_M 830 MQLIGWLNSDPIAVYLKALIYL-KSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLF 908 (950)
T ss_dssp HHHGGGCCSSHHHHHHHHHHHH-HTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTTTCSHHHHHHHHHHHHHH
T ss_pred HHHHhhcCCChHHHHHHHHHHH-HcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCcccccchhHHHHHHHHHHHH
Confidence 4455667889888899999887 899999999999987521 1111 124555666666
Q ss_pred HHcCCHHHHHHHHHHHHHhCC
Q 023753 254 QAHKDASRAESYFDQAVKSAP 274 (277)
Q Consensus 254 ~~~Gd~deAi~~yekALeldP 274 (277)
. .+-++-++++.+.||+...
T Consensus 909 ~-~~a~~~vi~fA~lAI~~~~ 928 (950)
T 4gq2_M 909 E-ESAYIDALEFSLLADASKE 928 (950)
T ss_dssp H-TTCHHHHHHHHHHHHHTCC
T ss_pred h-cCCHHHHHHHHHHHHhhcc
Confidence 6 8999999999999997543
No 260
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=75.99 E-value=6.6 Score=35.46 Aligned_cols=48 Identities=17% Similarity=0.200 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHH----hCCCCHH---HHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 023753 190 SSTDAYYEKMIE----ANPGNAL---LLGNYARFLKEVRGDFAKAEELCGRAILA 237 (277)
Q Consensus 190 deAi~~yekALe----ldP~n~~---al~nLA~lL~e~~Gd~eeA~e~~ekALel 237 (277)
++|...|++|++ +.|.+|. ...|++.+|++..++.++|....++|+.-
T Consensus 173 e~a~~aY~~A~~iA~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~ 227 (260)
T 2npm_A 173 EDALKAYKDATVVAKDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFEM 227 (260)
T ss_dssp HHHHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 468888999886 5677773 45678888888899999999988888763
No 261
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=75.29 E-value=44 Score=29.61 Aligned_cols=47 Identities=11% Similarity=0.065 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHH-----hCCCCHHH---HHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 023753 225 AKAEELCGRAIL-----ANPSDGNI---LSLYADLIWQAHKDASRAESYFDQAVK 271 (277)
Q Consensus 225 eeA~e~~ekALe-----ldP~n~~a---l~~LA~ll~~~~Gd~deAi~~yekALe 271 (277)
+.|.++|++|.. +.|.+|.- ..+++.+|+...++.++|....++|+.
T Consensus 150 e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd 204 (236)
T 3iqu_A 150 DSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFD 204 (236)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 557777877764 45777664 445677777767888887776666653
No 262
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=75.25 E-value=4.9 Score=36.54 Aligned_cols=49 Identities=24% Similarity=0.384 Sum_probs=37.5
Q ss_pred cHHHHHHHHHHHH-----h--CCCCHH---HHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 023753 189 SSSTDAYYEKMIE-----A--NPGNAL---LLGNYARFLKEVRGDFAKAEELCGRAILA 237 (277)
Q Consensus 189 ~deAi~~yekALe-----l--dP~n~~---al~nLA~lL~e~~Gd~eeA~e~~ekALel 237 (277)
.+.|...|++|++ + .|.+|. ...|++.+|++..++.++|....++|+.-
T Consensus 168 ~e~a~~aYq~A~eiA~~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde 226 (268)
T 3efz_A 168 IKQAVEFYEDALQRERSFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQA 226 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 3467888888864 4 678874 35577888888889999999998888775
No 263
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=74.79 E-value=7.5 Score=34.87 Aligned_cols=47 Identities=26% Similarity=0.335 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHH-----hCCCCHH---HHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 023753 190 SSTDAYYEKMIE-----ANPGNAL---LLGNYARFLKEVRGDFAKAEELCGRAIL 236 (277)
Q Consensus 190 deAi~~yekALe-----ldP~n~~---al~nLA~lL~e~~Gd~eeA~e~~ekALe 236 (277)
+.|...|++|++ +.|.+|. ...|++.+|++..++.++|....++|+.
T Consensus 148 ~~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd 202 (248)
T 3uzd_A 148 ESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFD 202 (248)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 468888988865 5788874 4567888899889999999887777754
No 264
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=74.44 E-value=2.9 Score=39.42 Aligned_cols=64 Identities=17% Similarity=0.133 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 023753 207 ALLLGNYARFLKEVRGDFAKAEELCGRAILANPS---DGNILSLYADLIWQAHKDASRAESYFDQAVKS 272 (277)
Q Consensus 207 ~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~---n~~al~~LA~ll~~~~Gd~deAi~~yekALel 272 (277)
..++..+|.++. ..||+++|.++|.++...... -.+++.....+++. .+|+..|..++++|..+
T Consensus 131 ~~~~~~la~~~~-~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~-~~d~~~~~~~~~ka~~~ 197 (429)
T 4b4t_R 131 AQAWINLGEYYA-QIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFF-YNDQLYVKEKLEAVNSM 197 (429)
T ss_dssp SSCCHHHHHHHH-HHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHh
Confidence 457889999887 899999999999999886433 34566677777777 89999999999999755
No 265
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=74.30 E-value=7.7 Score=34.99 Aligned_cols=47 Identities=23% Similarity=0.265 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHH-----hCCCCHH---HHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 023753 190 SSTDAYYEKMIE-----ANPGNAL---LLGNYARFLKEVRGDFAKAEELCGRAIL 236 (277)
Q Consensus 190 deAi~~yekALe-----ldP~n~~---al~nLA~lL~e~~Gd~eeA~e~~ekALe 236 (277)
+.|...|++|++ +.|.+|. ...|++.+|++..++.++|....++|+.
T Consensus 152 e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 206 (260)
T 1o9d_A 152 ESTLTAYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (260)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 367888998875 5788874 4568888999889999999888877764
No 266
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=72.52 E-value=9.1 Score=34.61 Aligned_cols=47 Identities=19% Similarity=0.224 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHH-----hCCCCHH---HHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 023753 190 SSTDAYYEKMIE-----ANPGNAL---LLGNYARFLKEVRGDFAKAEELCGRAIL 236 (277)
Q Consensus 190 deAi~~yekALe-----ldP~n~~---al~nLA~lL~e~~Gd~eeA~e~~ekALe 236 (277)
+.|...|++|++ +.|.+|. ...|++.+|++..++.++|....++|+.
T Consensus 173 e~a~~aY~~A~~iA~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd 227 (261)
T 3ubw_A 173 ENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 227 (261)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 467888888865 5688874 4557888888888999998887777754
No 267
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=72.14 E-value=18 Score=29.94 Aligned_cols=47 Identities=4% Similarity=0.068 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHhC--CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 023753 226 KAEELCGRAILAN--PSDGNILSLYADLIWQAHKDASRAESYFDQAVKSA 273 (277)
Q Consensus 226 eA~e~~ekALeld--P~n~~al~~LA~ll~~~~Gd~deAi~~yekALeld 273 (277)
.+.+.|.-+.... -..+..|..+|.++.. .|++++|.+.|+.+|+.+
T Consensus 83 dp~~if~~L~~~~IG~~~AlfYe~wA~~lE~-~g~~~~A~~Vy~~Gi~~~ 131 (152)
T 4a1g_A 83 DLHQFFEFLYNHGIGTLSSPLYIAWAGHLEA-QGELQHASAVLQRGIQNQ 131 (152)
T ss_dssp CHHHHHHHHHTTTTTTTBHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHCCCcHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHcC
Confidence 3677777766544 4678888889998888 999999999999999865
No 268
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=71.25 E-value=7.4 Score=28.78 Aligned_cols=19 Identities=21% Similarity=0.239 Sum_probs=15.5
Q ss_pred HHcCCHHHHHHHHHHHHHh
Q 023753 219 EVRGDFAKAEELCGRAILA 237 (277)
Q Consensus 219 e~~Gd~eeA~e~~ekALel 237 (277)
...|+|++|+.+|..||+.
T Consensus 22 D~~g~y~eAl~lY~~aie~ 40 (83)
T 2v6y_A 22 DKEGKVEDAITYYKKAIEV 40 (83)
T ss_dssp HHTTCHHHHHHHHHHHHHH
T ss_pred HHhccHHHHHHHHHHHHHH
Confidence 4789999999888888763
No 269
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=70.60 E-value=7.8 Score=28.81 Aligned_cols=19 Identities=21% Similarity=0.186 Sum_probs=15.5
Q ss_pred HHcCCHHHHHHHHHHHHHh
Q 023753 219 EVRGDFAKAEELCGRAILA 237 (277)
Q Consensus 219 e~~Gd~eeA~e~~ekALel 237 (277)
...|+|++|+.+|.+||+.
T Consensus 30 D~~g~y~eAl~lY~~aie~ 48 (83)
T 2w2u_A 30 DKEGNAEEAITNYKKAIEV 48 (83)
T ss_dssp HHTTCHHHHHHHHHHHHHH
T ss_pred HHhccHHHHHHHHHHHHHH
Confidence 4789999999888888764
No 270
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=68.24 E-value=7.6 Score=28.71 Aligned_cols=45 Identities=18% Similarity=0.234 Sum_probs=31.0
Q ss_pred cHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q 023753 189 SSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDG 242 (277)
Q Consensus 189 ~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~ 242 (277)
.++|+.+.++|++.|-. .+|...+. -|.+|+++|.++++..|+..
T Consensus 8 ~~~Ai~lv~~Ave~D~~-----g~y~eAl~----lY~~aie~l~~~lk~e~d~~ 52 (83)
T 2v6y_A 8 EDMARKYAILAVKADKE-----GKVEDAIT----YYKKAIEVLSQIIVLYPESV 52 (83)
T ss_dssp HHHHHHHHHHHHHHHHT-----TCHHHHHH----HHHHHHHHHHHHHHHCTTCT
T ss_pred HHHHHHHHHHHHHHHHh-----ccHHHHHH----HHHHHHHHHHHHHHHCCCHH
Confidence 35899999999887543 22222222 26789999999999887654
No 271
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=67.36 E-value=8.1 Score=28.71 Aligned_cols=46 Identities=13% Similarity=0.154 Sum_probs=31.8
Q ss_pred CcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q 023753 188 GSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDG 242 (277)
Q Consensus 188 d~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~ 242 (277)
-.++|+.+.++|++.|-.. ++...+. -|.+|+++|.++++..|+..
T Consensus 15 ~~~~Ai~lv~~Ave~D~~g-----~y~eAl~----lY~~aie~l~~alk~e~d~~ 60 (83)
T 2w2u_A 15 LEEMARKYAINAVKADKEG-----NAEEAIT----NYKKAIEVLAQLVSLYRDGS 60 (83)
T ss_dssp HHHHHHHHHHHHHHHHHTT-----CHHHHHH----HHHHHHHHHHHHHHHSTTSS
T ss_pred HHHHHHHHHHHHHHHHHhc-----cHHHHHH----HHHHHHHHHHHHHHHCCCHH
Confidence 3568999999998875432 2222232 26789999999999877543
No 272
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=67.20 E-value=6.1 Score=39.09 Aligned_cols=58 Identities=21% Similarity=0.202 Sum_probs=45.3
Q ss_pred HHHHhCCCcHHHHHHHHHHHHhCCCC-------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 023753 181 NYSNNNHGSSSTDAYYEKMIEANPGN-------ALLLGNYARFLKEVRGDFAKAEELCGRAILANPSD 241 (277)
Q Consensus 181 ~m~e~~Gd~deAi~~yekALeldP~n-------~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n 241 (277)
..|...+.+++|..+..++. .|.+ ..+++-+|.++. .+.+|.+|.+++..|+...|.+
T Consensus 239 RnYL~~~~y~qA~~lvsk~~--fP~~~~sn~q~~rY~YY~GRI~a-~q~~Y~eA~~~L~~A~rkap~~ 303 (523)
T 4b4t_S 239 RDFLNNGEVDSASDFISKLE--YPHTDVSSSLEARYFFYLSKINA-IQLDYSTANEYIIAAIRKAPHN 303 (523)
T ss_dssp HHHHHSSCSTTHHHHHHHHC--SCTTTSCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHTSSCSCS
T ss_pred HHHHccCcHHHHHHHHhcCc--CCcccCCHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHHhCCcc
Confidence 45556789999999999985 4432 234555688776 7899999999999999988764
No 273
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=64.46 E-value=12 Score=39.75 Aligned_cols=88 Identities=8% Similarity=-0.107 Sum_probs=59.8
Q ss_pred hHH-HHHHhCCCcHHHHHHHHHHHH---h-----------------CC---CCHHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 023753 178 SNN-NYSNNNHGSSSTDAYYEKMIE---A-----------------NP---GNALLLGNYARFLKEVRGDFAKAEELCGR 233 (277)
Q Consensus 178 yY~-~m~e~~Gd~deAi~~yekALe---l-----------------dP---~n~~al~nLA~lL~e~~Gd~eeA~e~~ek 233 (277)
|.. .++...|++++|..+|++|-. . .+ .-+.+|+....++ +..+.++.|+++.+.
T Consensus 846 yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LF-e~~~~~~~vi~fa~l 924 (1139)
T 4fhn_B 846 YLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKL-FEESAYIDALEFSLL 924 (1139)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHH-HHTSCCHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHH-HHcCCHHHHHHHHHH
Confidence 443 455567999999999998721 1 11 1124455555544 588999999999999
Q ss_pred HHHhCC-CCHH----HHHHHHHHHHHHcCCHHHHHHHHH
Q 023753 234 AILANP-SDGN----ILSLYADLIWQAHKDASRAESYFD 267 (277)
Q Consensus 234 ALeldP-~n~~----al~~LA~ll~~~~Gd~deAi~~ye 267 (277)
||+..+ ++.. .|.++=..+.. .++|++|-..+-
T Consensus 925 Ai~~~~~~~~~~~~~l~~~iFk~~L~-l~~ye~Ay~aL~ 962 (1139)
T 4fhn_B 925 ADASKETDDEDLSIAITHETLKTACA-AGKFDAAHVALM 962 (1139)
T ss_dssp HHHHCCSCCHHHHHHHHHHHHHHHHH-HCCSGGGGHHHH
T ss_pred HHHhccCCChhhHHHHHHHHHHHHHh-hCCHHHHHHHHH
Confidence 999875 4432 34555566677 899998866653
No 274
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=62.63 E-value=13 Score=27.94 Aligned_cols=35 Identities=14% Similarity=0.164 Sum_probs=26.6
Q ss_pred CCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 023753 187 HGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILA 237 (277)
Q Consensus 187 Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALel 237 (277)
.-.++|+.++++|++. ...++|++|+.+|..|++.
T Consensus 10 ~~l~~Ai~lv~~Ave~----------------D~~g~y~eAl~~Y~~Aie~ 44 (93)
T 1wfd_A 10 SDSTAAVAVLKRAVEL----------------DAESRYQQALVCYQEGIDM 44 (93)
T ss_dssp CHHHHHHHHHHHHHHH----------------HHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH----------------HHhCCHHHHHHHHHHHHHH
Confidence 3566777777777433 4789999999999988874
No 275
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=62.00 E-value=22 Score=34.09 Aligned_cols=65 Identities=17% Similarity=0.107 Sum_probs=46.3
Q ss_pred CCHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHhC-----CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 023753 205 GNALLLGNYARFLKEVRG--DFAKAEELCGRAILAN-----PSDGNILSLYADLIWQAHKDASRAESYFDQAVK 271 (277)
Q Consensus 205 ~n~~al~nLA~lL~e~~G--d~eeA~e~~ekALeld-----P~n~~al~~LA~ll~~~~Gd~deAi~~yekALe 271 (277)
..|.++.|||.+- +..- ....++..|.+||... ....+-|.++|.++++ .+++.+|+.++..|-.
T Consensus 253 rYPmALgnLgDLE-e~~pt~gr~~~l~L~~~AI~sa~~yY~n~HvYPYtylgGy~yR-~~~~reAl~~WA~Aa~ 324 (472)
T 3re2_A 253 TYPMAIANLGDLE-EISPTPGRPPAEELFKEAITVAKREYSDHHIYPYTYLGGYYYR-KKKYYEAIASWVDAGY 324 (472)
T ss_dssp TCHHHHHHHHHHH-HHSCCTTSCCHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred hCchhhcchhhHH-hcCCCCCCCCHHHHHHHHHHHHHHHhccCCccchhhhhhhhhh-cchHHHHHHHHHHHHH
Confidence 3577777777643 2222 2334888999998763 3455567778888888 9999999999988754
No 276
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=61.73 E-value=19 Score=34.03 Aligned_cols=81 Identities=11% Similarity=0.028 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHHhCCCC-HH-----HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--CC----HHHHHHHHHHHHHHcC
Q 023753 190 SSTDAYYEKMIEANPGN-AL-----LLGNYARFLKEVRGDFAKAEELCGRAILANP--SD----GNILSLYADLIWQAHK 257 (277)
Q Consensus 190 deAi~~yekALeldP~n-~~-----al~nLA~lL~e~~Gd~eeA~e~~ekALeldP--~n----~~al~~LA~ll~~~~G 257 (277)
+.-+..+..+++..-++ -. .-..+|.+|+ ..++|.+|...+.++++--. ++ .+++..-..+|.. .+
T Consensus 76 ~~~~~~~~~~~~~a~~~~r~flr~~l~~kL~~l~~-~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~-~~ 153 (394)
T 3txn_A 76 GIEVQLCKDCIEWAKQEKRTFLRQSLEARLIALYF-DTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHA-LS 153 (394)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHH-TT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHH-hc
Confidence 34455555555533222 11 2237888887 79999999999999887421 22 2345555677888 99
Q ss_pred CHHHHHHHHHHHHHh
Q 023753 258 DASRAESYFDQAVKS 272 (277)
Q Consensus 258 d~deAi~~yekALel 272 (277)
++.+|..+|.+|...
T Consensus 154 n~~k~k~~l~~a~~~ 168 (394)
T 3txn_A 154 NLPKARAALTSARTT 168 (394)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhh
Confidence 999999999999765
No 277
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=60.51 E-value=14 Score=29.23 Aligned_cols=33 Identities=15% Similarity=0.109 Sum_probs=24.6
Q ss_pred cHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 023753 189 SSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILA 237 (277)
Q Consensus 189 ~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALel 237 (277)
+++|+.++.+|+ -. ...++|++|+.+|..|+++
T Consensus 15 l~kAi~lv~~Av---------------e~-D~ag~y~eAl~lY~~Aie~ 47 (117)
T 2cpt_A 15 LQKAIDLASKAA---------------QE-DKAGNYEEALQLYQHAVQY 47 (117)
T ss_dssp HHHHHHHHHHHH---------------HH-HHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH---------------HH-HHccCHHHHHHHHHHHHHH
Confidence 456666666663 23 4789999999999998874
No 278
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=60.49 E-value=14 Score=27.58 Aligned_cols=19 Identities=11% Similarity=0.064 Sum_probs=16.6
Q ss_pred HHcCCHHHHHHHHHHHHHh
Q 023753 219 EVRGDFAKAEELCGRAILA 237 (277)
Q Consensus 219 e~~Gd~eeA~e~~ekALel 237 (277)
...|+|++|+.+|..||+.
T Consensus 27 D~~g~y~eAl~lY~~Aie~ 45 (86)
T 4a5x_A 27 DSESRYPQALVCYQEGIDL 45 (86)
T ss_dssp HHTTCHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHH
Confidence 4789999999999999864
No 279
>1p4b_L Antibody variable light chain; FV antibody, antigen peptide binder, SCFV, picomolar binder, immune system; 2.35A {Mus musculus} SCOP: b.1.1.1 PDB: 1p4i_L
Probab=60.19 E-value=3.2 Score=32.70 Aligned_cols=15 Identities=47% Similarity=0.915 Sum_probs=2.2
Q ss_pred eEEEecCCCCCCCCC
Q 023753 142 QTMVMGGGLGNNGGK 156 (277)
Q Consensus 142 ~~~~~ggg~g~~~g~ 156 (277)
...|.+.++|.|||+
T Consensus 110 ~L~V~~~~~~~~~~~ 124 (135)
T 1p4b_L 110 KLTVLGGGGGSGGGG 124 (135)
T ss_dssp EEEEC----------
T ss_pred EEEEEcCCCCCCCCC
Confidence 334555555444444
No 280
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=60.10 E-value=14 Score=27.58 Aligned_cols=47 Identities=11% Similarity=0.208 Sum_probs=33.0
Q ss_pred CCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q 023753 187 HGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDG 242 (277)
Q Consensus 187 Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~ 242 (277)
++-..|+.+..+|++.|-. .+|...+. -|..|+++|..++...|+..
T Consensus 11 ~~~~~A~~lv~~Ave~D~~-----g~y~eAl~----lY~~Aie~ll~alk~e~d~~ 57 (86)
T 4a5x_A 11 PQSTAAATVLKRAVELDSE-----SRYPQALV----CYQEGIDLLLQVLKGTKDNT 57 (86)
T ss_dssp CHHHHHHHHHHHHHHHHHT-----TCHHHHHH----HHHHHHHHHHHHHHTCCCHH
T ss_pred hHHHHHHHHHHHHHHHHHc-----CCHHHHHH----HHHHHHHHHHHHHhhCCCHH
Confidence 4557899999999998532 22333232 26889999999999887643
No 281
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=59.46 E-value=44 Score=29.49 Aligned_cols=52 Identities=6% Similarity=0.034 Sum_probs=41.3
Q ss_pred cCCHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 023753 221 RGDFAKAEELCGRAILA-----NPSD---GNILSLYADLIWQAHKDASRAESYFDQAVKS 272 (277)
Q Consensus 221 ~Gd~eeA~e~~ekALel-----dP~n---~~al~~LA~ll~~~~Gd~deAi~~yekALel 272 (277)
.|+.+.|..+|+.|.++ .|.+ -....+++.+|+..+++.++|....++|+..
T Consensus 138 ~g~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~ 197 (227)
T 2o8p_A 138 LCSLEDSKKIHQDAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKI 197 (227)
T ss_dssp SSCHHHHHHHHHHHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 35678999999999875 3444 4556788899999899999999999999654
No 282
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=58.30 E-value=14 Score=27.75 Aligned_cols=16 Identities=13% Similarity=0.175 Sum_probs=11.9
Q ss_pred CCCcHHHHHHHHHHHH
Q 023753 186 NHGSSSTDAYYEKMIE 201 (277)
Q Consensus 186 ~Gd~deAi~~yekALe 201 (277)
.+++++|+.+|..|++
T Consensus 28 ~g~y~eAl~~Y~~Aie 43 (93)
T 1wfd_A 28 ESRYQQALVCYQEGID 43 (93)
T ss_dssp TTCHHHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHH
Confidence 4788888777777765
No 283
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=58.00 E-value=52 Score=25.78 Aligned_cols=15 Identities=7% Similarity=0.182 Sum_probs=9.9
Q ss_pred CCcHHHHHHHHHHHH
Q 023753 187 HGSSSTDAYYEKMIE 201 (277)
Q Consensus 187 Gd~deAi~~yekALe 201 (277)
++|++|+.+|..|++
T Consensus 32 g~y~eAl~lY~~Aie 46 (117)
T 2cpt_A 32 GNYEEALQLYQHAVQ 46 (117)
T ss_dssp TCHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHH
Confidence 677777666666655
No 284
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=57.38 E-value=28 Score=30.79 Aligned_cols=47 Identities=11% Similarity=-0.002 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHH-----hCCCCHHH---HHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 023753 225 AKAEELCGRAIL-----ANPSDGNI---LSLYADLIWQAHKDASRAESYFDQAVK 271 (277)
Q Consensus 225 eeA~e~~ekALe-----ldP~n~~a---l~~LA~ll~~~~Gd~deAi~~yekALe 271 (277)
++|.++|++|+. +.|.+|.- ..+++.+|+...++.++|...-++|+.
T Consensus 147 e~a~~aY~~A~~iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd 201 (234)
T 2br9_A 147 ENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 201 (234)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 578888998885 46788764 456788888878999999888777764
No 285
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=57.25 E-value=20 Score=26.23 Aligned_cols=33 Identities=12% Similarity=0.010 Sum_probs=24.3
Q ss_pred cHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 023753 189 SSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILA 237 (277)
Q Consensus 189 ~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALel 237 (277)
.++|+.+..+|+ -. ...++|++|+.+|..|++.
T Consensus 10 l~~A~~l~~~Av---------------~~-D~~g~y~eAl~~Y~~aie~ 42 (85)
T 2v6x_A 10 LTKGIELVQKAI---------------DL-DTATQYEEAYTAYYNGLDY 42 (85)
T ss_dssp HHHHHHHHHHHH---------------HH-HHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH---------------HH-HHcCCHHHHHHHHHHHHHH
Confidence 456666666664 22 4789999999999998874
No 286
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=56.72 E-value=36 Score=28.63 Aligned_cols=55 Identities=18% Similarity=0.062 Sum_probs=45.5
Q ss_pred HHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 023753 183 SNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILAN 238 (277)
Q Consensus 183 ~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeld 238 (277)
+-.++..++-.+.+...+.-++-+|.++..+|.+|. +.|+..+|.+.+.+|-+.-
T Consensus 101 lv~~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~-Klg~~r~a~eLl~~AC~kG 155 (172)
T 1wy6_A 101 LVIQGKRDKLEEIGREILKNNEVSASILVAIANALR-RVGDERDATTLLIEACKKG 155 (172)
T ss_dssp HHHTTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHTT
T ss_pred HHHhccHhHHHHHHHHHhccCCCChHHHHHHHHHHH-HhcchhhHHHHHHHHHHhh
Confidence 344678888888888877778888999999999997 8999999999999998754
No 287
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=55.72 E-value=15 Score=35.59 Aligned_cols=86 Identities=8% Similarity=-0.035 Sum_probs=50.9
Q ss_pred CcHHHHHHHHHHHHhCCC--CH--------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC----------CC
Q 023753 188 GSSSTDAYYEKMIEANPG--NA--------------LLLGNYARFLKEVRGDFAKAEELCGRAILANP----------SD 241 (277)
Q Consensus 188 d~deAi~~yekALeldP~--n~--------------~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP----------~n 241 (277)
..++|.....++...--+ ++ ...+++-.+|+ +.++..-|...++..-...+ .-
T Consensus 141 ~le~~a~~i~k~F~~cl~Dr~~~~~~s~p~kk~~~l~l~n~L~kiYF-kl~~~~lckni~k~i~~~~~~p~~~~~p~~q~ 219 (455)
T 3t5v_B 141 FLSHISSILSRLFNSIKPPRGNASSTNIPGKQRILLYLVNKLNNIYF-RIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQ 219 (455)
T ss_dssp HHHHHHHHHHHHHHHCCCC----CCSSCCHHHHHHHHHHHHHHHHHH-HSSCCTTHHHHHHTHHHHCCCSCGGGSCHHHH
T ss_pred HHHHHHHHHHHHHHHhcccCCCcccccccccchhHHHHHHHHHHHHH-HcCCHHHHHHHHHHhccCCCCcChhhCCccce
Confidence 455666777777665111 11 12233344555 67777777666644322222 12
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-CCC
Q 023753 242 GNILSLYADLIWQAHKDASRAESYFDQAVKS-APD 275 (277)
Q Consensus 242 ~~al~~LA~ll~~~~Gd~deAi~~yekALel-dPd 275 (277)
..++|++|.+++. +.+|.+|.+++..|++. .|.
T Consensus 220 v~Y~YYlGr~~~~-~~~y~~A~~~L~~A~~~lcp~ 253 (455)
T 3t5v_B 220 IEYRYLLGRYYLL-NSQVHNAFVQFNEAFQSLLNL 253 (455)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHC
T ss_pred EeeeHHHHHHHHH-HccHHHHHHHHHHHHHhcCCc
Confidence 3457777888877 88888888888888877 554
No 288
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=55.41 E-value=30 Score=31.10 Aligned_cols=47 Identities=11% Similarity=0.087 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHh----CCCCHHH---HHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 023753 225 AKAEELCGRAILA----NPSDGNI---LSLYADLIWQAHKDASRAESYFDQAVK 271 (277)
Q Consensus 225 eeA~e~~ekALel----dP~n~~a---l~~LA~ll~~~~Gd~deAi~~yekALe 271 (277)
++|.++|++|+++ .|.+|.- ..+++.+|+...++.++|....++|+.
T Consensus 173 e~a~~aY~~A~~iA~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 226 (260)
T 2npm_A 173 EDALKAYKDATVVAKDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFE 226 (260)
T ss_dssp HHHHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 5788899999864 6777754 456788888878999999988888775
No 289
>2l6f_A Focal adhesion kinase 1, linker1, paxillin, linke paxillin; FAT, FAK, LD2, LD4, fusion protein, chimera protei transferase,cell adhesion; NMR {Gallus gallus} PDB: 2l6g_A 2l6h_A
Probab=59.91 E-value=2.6 Score=37.13 Aligned_cols=6 Identities=17% Similarity=0.407 Sum_probs=2.8
Q ss_pred hhhhhh
Q 023753 105 RIQRLF 110 (277)
Q Consensus 105 ~~~~~~ 110 (277)
|++..|
T Consensus 129 Ri~~~~ 134 (215)
T 2l6f_A 129 RLKMIS 134 (215)
Confidence 445444
No 290
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=54.23 E-value=32 Score=30.88 Aligned_cols=47 Identities=13% Similarity=0.034 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHH-----hCCCCHHH---HHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 023753 225 AKAEELCGRAIL-----ANPSDGNI---LSLYADLIWQAHKDASRAESYFDQAVK 271 (277)
Q Consensus 225 eeA~e~~ekALe-----ldP~n~~a---l~~LA~ll~~~~Gd~deAi~~yekALe 271 (277)
++|..+|++|+. +.|.+|.- ..+++.+|+...++.++|....++|+.
T Consensus 152 e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 206 (260)
T 1o9d_A 152 ESTLTAYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (260)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 578888998875 46788764 456788888878999999887777764
No 291
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=54.07 E-value=57 Score=27.15 Aligned_cols=54 Identities=13% Similarity=0.105 Sum_probs=30.8
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHH-H--HHHHHHHcCCHHHHHHHHHHHHH
Q 023753 216 FLKEVRGDFAKAEELCGRAILANPSD------GNILSL-Y--ADLIWQAHKDASRAESYFDQAVK 271 (277)
Q Consensus 216 lL~e~~Gd~eeA~e~~ekALeldP~n------~~al~~-L--A~ll~~~~Gd~deAi~~yekALe 271 (277)
.++ ..++|=+|-+.++.+-...+.. ...+.. + |...+. .|+..-|...+.+|+.
T Consensus 41 ~lF-n~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~-rgN~~GA~~ll~~Al~ 103 (161)
T 2ijq_A 41 RLY-NSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFD-FEDDDGMRSLFRTSLQ 103 (161)
T ss_dssp HHH-HTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHH-HCCHHHHHHHHHHHHH
T ss_pred HHH-hCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHH
Confidence 344 4577777777777777665544 111222 2 223333 5777777777777765
No 292
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=54.07 E-value=35 Score=33.37 Aligned_cols=64 Identities=14% Similarity=0.128 Sum_probs=43.3
Q ss_pred CHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHhC-----CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 023753 206 NALLLGNYARFLKEVRG--DFAKAEELCGRAILAN-----PSDGNILSLYADLIWQAHKDASRAESYFDQAVK 271 (277)
Q Consensus 206 n~~al~nLA~lL~e~~G--d~eeA~e~~ekALeld-----P~n~~al~~LA~ll~~~~Gd~deAi~~yekALe 271 (277)
.|.++.|||.+- +..- ....++..|.+||... ....+-|.++|.++++ .+++.+|+.++..|-.
T Consensus 276 YPmALgnLgDLE-e~~pt~gr~~~~~L~~~AI~sa~~~Y~n~HvYPYtYlgGy~yR-~~~~reAl~~WA~Aa~ 346 (550)
T 3u84_A 276 YPMALGNLADLE-ELEPTPGRPDPLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCR-NRNVREALQAWADTAT 346 (550)
T ss_dssp CHHHHHHHHHHH-HHSCCTTCCCHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred CchhhcchhhHh-hcCCCCCCCCHHHHHHHHHHHHHHHhccCCccceeecchhhhh-cchHHHHHHHHHHHHH
Confidence 455666666532 1221 1234788888888753 3455567778888888 9999999999988754
No 293
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=53.61 E-value=64 Score=28.31 Aligned_cols=48 Identities=10% Similarity=0.093 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 023753 225 AKAEELCGRAILAN--PSDGNILSLYADLIWQAHKDASRAESYFDQAVKSA 273 (277)
Q Consensus 225 eeA~e~~ekALeld--P~n~~al~~LA~ll~~~~Gd~deAi~~yekALeld 273 (277)
+.+...|.-+.... -..+..|..+|.++.. .|++++|.+.|+.+|+..
T Consensus 131 ~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~-~g~~~~A~~Vy~~Gi~~~ 180 (223)
T 4aez_C 131 DEPVELFSFLAHHHIGQESSIFYEEYANYFES-RGLFQKADEVYQKGKRMK 180 (223)
T ss_dssp SCHHHHHHHHHHTTCSTTBHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHCCcchhHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHcC
Confidence 34555666555543 4566777777777777 888888888888887654
No 294
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=53.61 E-value=34 Score=30.55 Aligned_cols=48 Identities=13% Similarity=0.109 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHH-----hCCCCHHH---HHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 023753 224 FAKAEELCGRAIL-----ANPSDGNI---LSLYADLIWQAHKDASRAESYFDQAVK 271 (277)
Q Consensus 224 ~eeA~e~~ekALe-----ldP~n~~a---l~~LA~ll~~~~Gd~deAi~~yekALe 271 (277)
.+.|.++|++|+. +.|.+|.- ..+++.+|+...++.++|....++|+.
T Consensus 147 ~~~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd 202 (248)
T 3uzd_A 147 VESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFD 202 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3678888988875 56788764 456788888878999998887777764
No 295
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=53.24 E-value=33 Score=25.06 Aligned_cols=35 Identities=20% Similarity=0.266 Sum_probs=26.6
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 023753 212 NYARFLKEVRGDFAKAEELCGRAILANPSDGNILSL 247 (277)
Q Consensus 212 nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~ 247 (277)
.+|..+. ..|++++|..+|-+|+...|.-...+..
T Consensus 22 ~~GE~L~-~~g~~~~~~~hf~nAl~Vc~qP~~LL~i 56 (73)
T 3ax2_A 22 QLGEELL-AQGDYEKGVDHLTNAIAVCGQPQQLLQV 56 (73)
T ss_dssp HHHHHHH-HTTCHHHHHHHHHHHHHTCSSCHHHHHH
T ss_pred HHHHHHH-HCCCHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 4566665 6788889999999999988887665543
No 296
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=51.87 E-value=22 Score=25.96 Aligned_cols=16 Identities=6% Similarity=0.023 Sum_probs=11.5
Q ss_pred CCCcHHHHHHHHHHHH
Q 023753 186 NHGSSSTDAYYEKMIE 201 (277)
Q Consensus 186 ~Gd~deAi~~yekALe 201 (277)
.+++++|+.+|..|++
T Consensus 26 ~g~y~eAl~~Y~~aie 41 (85)
T 2v6x_A 26 ATQYEEAYTAYYNGLD 41 (85)
T ss_dssp TTCHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHH
Confidence 4777777777777665
No 297
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=51.67 E-value=87 Score=26.04 Aligned_cols=73 Identities=14% Similarity=0.191 Sum_probs=48.5
Q ss_pred HHHHHHHHHhCCC------CH---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHHcCCHHH
Q 023753 193 DAYYEKMIEANPG------NA---LLLGNYARFLKEVRGDFAKAEELCGRAILAN--PSDGNILSLYADLIWQAHKDASR 261 (277)
Q Consensus 193 i~~yekALeldP~------n~---~al~nLA~lL~e~~Gd~eeA~e~~ekALeld--P~n~~al~~LA~ll~~~~Gd~de 261 (277)
...++++++.--+ |+ .+|..|+. ...+ +.+.|..+.... -..+..|..+|.++-. .+++.+
T Consensus 43 ~~lLErc~~~f~~~~~YknD~RyLklWl~ya~----~~~~---p~~if~~L~~~~IG~~~AlfY~~wA~~lE~-~~~~~~ 114 (164)
T 2wvi_A 43 STLLERAVEALQGEKRYYSDPRFLNLWLKLGR----LCNE---PLDMYSYLHNQGIGVSLAQFYISWAEEYEA-RENFRK 114 (164)
T ss_dssp HHHHHHHHHHTTTCGGGTTCHHHHHHHHHHHH----HCSC---HHHHHHHHHHTTSSTTBHHHHHHHHHHHHH-TTCHHH
T ss_pred HHHHHHHHHHhhhhhhhccCHHHHHHHHHHHH----hcCC---HHHHHHHHHHCCcchhhHHHHHHHHHHHHH-cCCHHH
Confidence 4566777665322 33 34444443 2333 555666666544 4677788888888887 899999
Q ss_pred HHHHHHHHHHhC
Q 023753 262 AESYFDQAVKSA 273 (277)
Q Consensus 262 Ai~~yekALeld 273 (277)
|.+.|+.+|+..
T Consensus 115 A~~Iy~~Gi~~~ 126 (164)
T 2wvi_A 115 ADAIFQEGIQQK 126 (164)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHcC
Confidence 999999999765
No 298
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=50.08 E-value=42 Score=32.66 Aligned_cols=65 Identities=12% Similarity=0.109 Sum_probs=46.4
Q ss_pred CCHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHhC-----CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 023753 205 GNALLLGNYARFLKEVRG--DFAKAEELCGRAILAN-----PSDGNILSLYADLIWQAHKDASRAESYFDQAVK 271 (277)
Q Consensus 205 ~n~~al~nLA~lL~e~~G--d~eeA~e~~ekALeld-----P~n~~al~~LA~ll~~~~Gd~deAi~~yekALe 271 (277)
..|.++.+||.+-- ..- ....+++.|++||... .....-|.++|..++. .++|.+|+.++-.|-+
T Consensus 260 ~YPmALgnLgDLEe-i~pt~grp~~~~Lf~~AI~~ar~~Y~~~hvYPYtYlgG~~~R-~~~~~eAl~~wa~aa~ 331 (489)
T 4gq4_A 260 RYPMALGNLADLEE-LEPTPGRPDPLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCR-NRNVREALQAWADTAT 331 (489)
T ss_dssp TCHHHHHHHHHHHH-HSCCTTSCCHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred hcchhhhcccCHhh-cCCCCCCCCHHHHHHHHHHHHHHhcccCcccceeecchHHHH-hhhHHHHHHHhhhhhh
Confidence 46788888887542 322 2345788999998853 3344556667888888 9999999999988754
No 299
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=49.52 E-value=39 Score=28.68 Aligned_cols=76 Identities=8% Similarity=-0.049 Sum_probs=44.6
Q ss_pred hhHHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHH----HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 023753 177 GSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARF----LKEVRGDFAKAEELCGRAILANPSDGNILSLYADLI 252 (277)
Q Consensus 177 ~yY~~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~l----L~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll 252 (277)
-|.+.++..+.+|.+|.+++.+|+..-|.+.......... ..+..|++.. ...+++ .+. ..+..+..++
T Consensus 18 YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~~~~k~~IL~yLIp~~Ll~G~iP~-~~ll~~----~~~--~~y~~L~~Av 90 (203)
T 3t5x_A 18 YYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHMPT-VELLKK----YHL--MQFAEVTRAV 90 (203)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTTCEEC-HHHHHH----TTC--GGGHHHHHHH
T ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHcCCCCC-HHHhhh----Cch--hHHHHHHHHH
Confidence 3455777778999999999999999988764332222211 1235677654 223332 122 2356676655
Q ss_pred HHHcCCHHH
Q 023753 253 WQAHKDASR 261 (277)
Q Consensus 253 ~~~~Gd~de 261 (277)
. .||...
T Consensus 91 r--~Gdl~~ 97 (203)
T 3t5x_A 91 S--EGNLLL 97 (203)
T ss_dssp H--HTCHHH
T ss_pred H--hCCHHH
Confidence 4 487554
No 300
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=48.36 E-value=30 Score=31.72 Aligned_cols=66 Identities=14% Similarity=-0.069 Sum_probs=43.5
Q ss_pred CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHH----------------H---hCCCCHHHHHHHHHHHHHHcCCHHHHHHH
Q 023753 205 GNALLLGNYARFLKEVRGDFAKAEELCGRAI----------------L---ANPSDGNILSLYADLIWQAHKDASRAESY 265 (277)
Q Consensus 205 ~n~~al~nLA~lL~e~~Gd~eeA~e~~ekAL----------------e---ldP~n~~al~~LA~ll~~~~Gd~deAi~~ 265 (277)
.++..|..+|..|+ ..+++.+|+.||-..- + -.|.....+..-|.+.+...++...|...
T Consensus 132 Gdp~LH~~~a~~~~-~e~~~~~A~~H~i~~~~~s~~~~a~~l~~w~~~~~~~~~~e~dlf~~RaVL~yL~l~n~~~A~~~ 210 (312)
T 2wpv_A 132 GDPYLHNTIGSKLL-EGDFVYEAERYFMLGTHDSMIKYVDLLWDWLCQVDDIEDSTVAEFFSRLVFNYLFISNISFAHES 210 (312)
T ss_dssp CCHHHHHHHHHHHH-HTTCHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHTTBHHHHHHH
T ss_pred CCHHHHHHHHHHHh-hcCCHHHHHHHHHhCCCccHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 58899999999998 7899999999885221 1 12333343434443333337888888888
Q ss_pred HHHHHH
Q 023753 266 FDQAVK 271 (277)
Q Consensus 266 yekALe 271 (277)
|+..++
T Consensus 211 ~~~f~~ 216 (312)
T 2wpv_A 211 KDIFLE 216 (312)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 776553
No 301
>2i9o_A MHB8A peptide; beta-hairpin, alpha-helix, de novo protein; NMR {Synthetic}
Probab=48.05 E-value=13 Score=23.24 Aligned_cols=8 Identities=13% Similarity=-0.010 Sum_probs=3.6
Q ss_pred CcchhhHH
Q 023753 173 SGFSGSNN 180 (277)
Q Consensus 173 ~~~~~yY~ 180 (277)
++.++|-.
T Consensus 21 saaeayak 28 (37)
T 2i9o_A 21 SAAEAYAK 28 (37)
T ss_dssp SSHHHHHH
T ss_pred hHHHHHHH
Confidence 44444444
No 302
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=47.57 E-value=72 Score=34.40 Aligned_cols=61 Identities=5% Similarity=-0.201 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH-----hCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 023753 209 LLGNYARFLKEVRGDFAKAEELCGRAIL-----ANPSDGNILSLYADLIWQAHKDASRAESYFDQAVKS 272 (277)
Q Consensus 209 al~nLA~lL~e~~Gd~eeA~e~~ekALe-----ldP~n~~al~~LA~ll~~~~Gd~deAi~~yekALel 272 (277)
.++.+-..|. +.|+.++|...|++..+ ..| |...|+.+-..|.. .|+.++|.++|++..+.
T Consensus 129 TynaLIdglc-K~G~leeA~~Lf~eM~~m~~kG~~P-dvvTYNtLI~Glck-~G~~~eA~~Lf~eM~~~ 194 (1134)
T 3spa_A 129 RLLAFFKCCL-LTDQLPLAHHLLVVHHGQRQKRKLL-TLDMYNAVMLGWAR-QGAFKELVYVLFMVKDA 194 (1134)
T ss_dssp HHHHHHHHHH-HHTCHHHHHHHHHHHHHSHHHHTTC-CHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHH-hCCCHHHHHHHHHHHHHHhhcCCCC-CHhHHHHHHHHHHh-CCCHHHHHHHHHHHHHc
Confidence 4566666676 78999999999976543 344 66778888888888 99999999999998753
No 303
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=47.03 E-value=1.2e+02 Score=28.05 Aligned_cols=86 Identities=13% Similarity=0.059 Sum_probs=52.1
Q ss_pred hCCCcHHHHHHHHHHHHhC---------------CCC--HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-------CCC
Q 023753 185 NNHGSSSTDAYYEKMIEAN---------------PGN--ALLLGNYARFLKEVRGDFAKAEELCGRAILA-------NPS 240 (277)
Q Consensus 185 ~~Gd~deAi~~yekALeld---------------P~n--~~al~nLA~lL~e~~Gd~eeA~e~~ekALel-------dP~ 240 (277)
...+.++|.+++++....- -.. ..+...++.++. ..++.++|..+++++-.. +|.
T Consensus 88 ~~~d~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~ea~l~i~~~i~~~yl-~~~d~~~a~~~l~~~~~~l~~~~~~~~~ 166 (393)
T 4b4t_O 88 DSKDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLIDSEIARTYL-LKNDLVKARDLLDDLEKTLDKKDSIPLR 166 (393)
T ss_dssp HTTCHHHHHHHHHHHTTTSHHHHSSCCCCCCSSSSCCSHHHHHHHHHHHHH-HHSCHHHHHHHHHHHHHHHHHSCCSSSH
T ss_pred hcCCHHHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHhhhccCCccHH
Confidence 3467788888887653211 012 234556666665 689999999999998653 232
Q ss_pred CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 023753 241 DGNILSLYADLIWQAHKDASRAESYFDQAVK 271 (277)
Q Consensus 241 n~~al~~LA~ll~~~~Gd~deAi~~yekALe 271 (277)
....++.....|++..+++..+...+-.++.
T Consensus 167 v~~~~y~~~~~~~~~~~~~a~~y~~~l~~l~ 197 (393)
T 4b4t_O 167 ITNSFYSTNSQYFKFKNDFNSFYYTSLLYLS 197 (393)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 2333333334444447888877666655554
No 304
>2i7u_A Four-alpha-helix bundle; HOMO dimer, anesthetic binding, de novo protein/ligand binding protein complex; NMR {Synthetic} PDB: 2jst_A
Probab=46.95 E-value=3.2 Score=28.72 Aligned_cols=8 Identities=0% Similarity=0.318 Sum_probs=3.4
Q ss_pred HHHHHHHH
Q 023753 191 STDAYYEK 198 (277)
Q Consensus 191 eAi~~yek 198 (277)
+|++.|+-
T Consensus 47 kaeelfkl 54 (62)
T 2i7u_A 47 KAEELFKL 54 (62)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 34444443
No 305
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=46.23 E-value=92 Score=25.60 Aligned_cols=55 Identities=20% Similarity=0.306 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Q 023753 190 SSTDAYYEKMIEAN--PGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNIL 245 (277)
Q Consensus 190 deAi~~yekALeld--P~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al 245 (277)
+++...|+.+.... -..+..|-.+|.++ +..+++.+|.+.|+++|+.+..-.+-+
T Consensus 82 ~dp~~if~~L~~~~IG~~~AlfYe~wA~~l-E~~g~~~~A~~Vy~~Gi~~~A~P~~rL 138 (152)
T 4a1g_A 82 SDLHQFFEFLYNHGIGTLSSPLYIAWAGHL-EAQGELQHASAVLQRGIQNQAEPREFL 138 (152)
T ss_dssp SCHHHHHHHHHTTTTTTTBHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHTTCBSHHHH
T ss_pred CCHHHHHHHHHHCCCcHHHHHHHHHHHHHH-HHcCCHHHHHHHHHHHHHcCCccHHHH
Confidence 45777777776654 44577888899877 589999999999999999876655443
No 306
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=45.15 E-value=36 Score=35.44 Aligned_cols=52 Identities=19% Similarity=0.077 Sum_probs=40.7
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 023753 213 YARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQAV 270 (277)
Q Consensus 213 LA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~Gd~deAi~~yekAL 270 (277)
+...+. ..+.++-| ...+..-|.++..-+.+|.+++. .|++++|..+|++|-
T Consensus 816 l~~~L~-~~~~~~~a----~eL~~~~~~t~~~~yv~gr~~L~-~ge~~~A~~~F~kAA 867 (950)
T 4gq2_M 816 LVEKLF-LFKQYNAC----MQLIGWLNSDPIAVYLKALIYLK-SKEAVKAVRCFKTTS 867 (950)
T ss_dssp HHHHHH-HTTCHHHH----HHHGGGCCSSHHHHHHHHHHHHH-TTCHHHHHHHHHTCC
T ss_pred HHHHHH-HhcHHHHH----HHHHhhcCCChHHHHHHHHHHHH-cCCHHHHHHHHHHHh
Confidence 344443 56777654 34567778899888999999999 999999999999874
No 307
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=44.49 E-value=34 Score=31.01 Aligned_cols=49 Identities=20% Similarity=0.264 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHH-----h--CCCCHHH---HHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 023753 224 FAKAEELCGRAIL-----A--NPSDGNI---LSLYADLIWQAHKDASRAESYFDQAVKS 272 (277)
Q Consensus 224 ~eeA~e~~ekALe-----l--dP~n~~a---l~~LA~ll~~~~Gd~deAi~~yekALel 272 (277)
.++|.++|++|++ + .|.+|.- ..+++.+|+...++.++|....++|+.-
T Consensus 168 ~e~a~~aYq~A~eiA~~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde 226 (268)
T 3efz_A 168 IKQAVEFYEDALQRERSFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQA 226 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 3678889988875 3 5778764 4567888887789999999999998865
No 308
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=43.14 E-value=31 Score=31.08 Aligned_cols=47 Identities=11% Similarity=-0.002 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHH-----hCCCCHHH---HHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 023753 225 AKAEELCGRAIL-----ANPSDGNI---LSLYADLIWQAHKDASRAESYFDQAVK 271 (277)
Q Consensus 225 eeA~e~~ekALe-----ldP~n~~a---l~~LA~ll~~~~Gd~deAi~~yekALe 271 (277)
+.|.++|++|+. +.|.+|.- ..+++.+|+...++.++|....++|+.
T Consensus 173 e~a~~aY~~A~~iA~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd 227 (261)
T 3ubw_A 173 ENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 227 (261)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 678889988875 46788764 456788888878999998887777764
No 309
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=43.07 E-value=45 Score=33.32 Aligned_cols=44 Identities=27% Similarity=0.330 Sum_probs=36.9
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC
Q 023753 212 NYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHK 257 (277)
Q Consensus 212 nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~al~~LA~ll~~~~G 257 (277)
..|...+ ..|+|.-|.+.+..++..+|+|..+...+|.+|.+ ++
T Consensus 454 ~~a~~~~-~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~-l~ 497 (658)
T 2cfu_A 454 EQARASY-ARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQ-LG 497 (658)
T ss_dssp HHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HH
T ss_pred HHHHHHH-HCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH-HH
Confidence 3444444 57899999999999999999999999999998877 54
No 310
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=42.33 E-value=32 Score=25.09 Aligned_cols=28 Identities=7% Similarity=0.118 Sum_probs=23.9
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 023753 247 LYADLIWQAHKDASRAESYFDQAVKSAPD 275 (277)
Q Consensus 247 ~LA~ll~~~~Gd~deAi~~yekALeldPd 275 (277)
.+|..+.. .|++++|+.+|-+|+...|+
T Consensus 22 ~~GE~L~~-~g~~~~~~~hf~nAl~Vc~q 49 (73)
T 3ax2_A 22 QLGEELLA-QGDYEKGVDHLTNAIAVCGQ 49 (73)
T ss_dssp HHHHHHHH-TTCHHHHHHHHHHHHHTCSS
T ss_pred HHHHHHHH-CCCHHHHHHHHHHHHHHcCC
Confidence 46777887 89999999999999998775
No 311
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=41.85 E-value=38 Score=26.01 Aligned_cols=30 Identities=20% Similarity=0.193 Sum_probs=18.2
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Q 023753 213 YARFLKEVRGDFAKAEELCGRAILANPSDGNI 244 (277)
Q Consensus 213 LA~lL~e~~Gd~eeA~e~~ekALeldP~n~~a 244 (277)
+|..|. ..|+++.|+.||-+||...| .|..
T Consensus 26 lGE~L~-~~g~~e~av~Hf~nAl~Vc~-qP~~ 55 (95)
T 1om2_A 26 LGEELL-AQGDYEKGVDHLTNAIAVCG-QPQQ 55 (95)
T ss_dssp HHHHHH-HHTCHHHHHHHHHHHHHHHS-CHHH
T ss_pred HHHHHH-HCCCHHHHHHHHHHHHHHcC-CHHH
Confidence 444443 56677777777777777655 3443
No 312
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=41.79 E-value=40 Score=26.03 Aligned_cols=29 Identities=21% Similarity=0.108 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 023753 207 ALLLGNYARFLKEVRGDFAKAEELCGRAIL 236 (277)
Q Consensus 207 ~~al~nLA~lL~e~~Gd~eeA~e~~ekALe 236 (277)
+-.+...|..+. ..++|++|+++.++|..
T Consensus 15 AH~~~RrAe~ll-~~gkydeAIech~kAa~ 43 (97)
T 2crb_A 15 AHQQSRRADRLL-AAGKYEEAISCHRKATT 43 (97)
T ss_dssp HHHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred hhHhhhHHHHHH-hcCCHHHHHHHHHHHHH
Confidence 344555666564 67888888888888753
No 313
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=41.66 E-value=1.8e+02 Score=26.87 Aligned_cols=67 Identities=13% Similarity=0.119 Sum_probs=42.9
Q ss_pred CCCHHHHHHHHHHHHHHcCCHHHHHHHHHH-------HH---------HhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHH
Q 023753 204 PGNALLLGNYARFLKEVRGDFAKAEELCGR-------AI---------LANPSDGNILSLYADLIWQAHKDASRAESYFD 267 (277)
Q Consensus 204 P~n~~al~nLA~lL~e~~Gd~eeA~e~~ek-------AL---------eldP~n~~al~~LA~ll~~~~Gd~deAi~~ye 267 (277)
-.++..+..+|..|+ ..+++.+|+.+|-. ++ +..|.....+..-|.+.+...++...|...|+
T Consensus 133 ~Gdp~LH~~ig~~~~-~e~~~~~Ae~H~ilg~~~s~~~~a~mL~ew~~~~~~~e~dlfiaRaVL~yL~l~n~~~A~~~~~ 211 (336)
T 3lpz_A 133 AGDPELHHVVGTLYV-EEGEFEAAEKHLVLGTKESPEVLARMEYEWYKQDESHTAPLYCARAVLPYLLVANVRAANTAYR 211 (336)
T ss_dssp TCCHHHHHHHHHHHH-HTTCHHHHHHHHTTSCTTHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH-ccCCHHHHHHHHHhcCCchHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 357889999999888 67889999888731 11 11233444444445444444788888887665
Q ss_pred HHHH
Q 023753 268 QAVK 271 (277)
Q Consensus 268 kALe 271 (277)
..++
T Consensus 212 ~f~~ 215 (336)
T 3lpz_A 212 IFTS 215 (336)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5553
No 314
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=41.63 E-value=1.3e+02 Score=26.40 Aligned_cols=54 Identities=17% Similarity=0.272 Sum_probs=42.6
Q ss_pred cHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q 023753 189 SSSTDAYYEKMIEAN--PGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGN 243 (277)
Q Consensus 189 ~deAi~~yekALeld--P~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~ 243 (277)
.+.+...|..+.... -..+.+|-.+|.+| +..|++.+|.+.|+++|+..-.-..
T Consensus 130 ~~~p~~if~~L~~~~IG~~~AlfYe~wA~~l-E~~g~~~~A~~Vy~~Gi~~~A~P~~ 185 (223)
T 4aez_C 130 IDEPVELFSFLAHHHIGQESSIFYEEYANYF-ESRGLFQKADEVYQKGKRMKAKPFL 185 (223)
T ss_dssp CSCHHHHHHHHHHTTCSTTBHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHTCBSHH
T ss_pred cCCHHHHHHHHHHCCcchhHHHHHHHHHHHH-HHcCCHHHHHHHHHHHHHcCCccHH
Confidence 456777887777755 45678888999888 4899999999999999998766433
No 315
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=41.51 E-value=19 Score=28.79 Aligned_cols=15 Identities=20% Similarity=0.222 Sum_probs=8.5
Q ss_pred CCHHHHHHHHHHHHH
Q 023753 222 GDFAKAEELCGRAIL 236 (277)
Q Consensus 222 Gd~eeA~e~~ekALe 236 (277)
++.+.|+++|++.|.
T Consensus 36 g~k~~Al~lYk~GI~ 50 (116)
T 2dl1_A 36 GQKEEAKNYYKQGIG 50 (116)
T ss_dssp TCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH
Confidence 566666665555543
No 316
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=41.04 E-value=77 Score=30.18 Aligned_cols=30 Identities=13% Similarity=0.247 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 023753 242 GNILSLYADLIWQAHKDASRAESYFDQAVKS 272 (277)
Q Consensus 242 ~~al~~LA~ll~~~~Gd~deAi~~yekALel 272 (277)
..|+..+|.+|+. ++++++|+.+.+++|..
T Consensus 203 ~aA~allArvyL~-~~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 203 EVVLGILSRACLY-ARQWEKAKTYSDKLLAK 232 (495)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-hhhHHHHHHHHHHHHhc
Confidence 4578889999999 99999999999999875
No 317
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=40.18 E-value=1.4e+02 Score=24.80 Aligned_cols=54 Identities=17% Similarity=0.159 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Q 023753 190 SSTDAYYEKMIEAN--PGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNI 244 (277)
Q Consensus 190 deAi~~yekALeld--P~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~a 244 (277)
+.+...|+.+.... -..+..|-.+|.++ +..+++.+|.+.|+.+|+.+..-..-
T Consensus 77 ~~p~~if~~L~~~~IG~~~AlfY~~wA~~l-E~~~~~~~A~~Iy~~Gi~~~A~P~~~ 132 (164)
T 2wvi_A 77 NEPLDMYSYLHNQGIGVSLAQFYISWAEEY-EARENFRKADAIFQEGIQQKAEPLER 132 (164)
T ss_dssp SCHHHHHHHHHHTTSSTTBHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHTTCBSHHH
T ss_pred CCHHHHHHHHHHCCcchhhHHHHHHHHHHH-HHcCCHHHHHHHHHHHHHcCCCcHHH
Confidence 34666777776654 45678888999887 48999999999999999987655443
No 318
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=38.34 E-value=1.9e+02 Score=24.85 Aligned_cols=56 Identities=16% Similarity=0.175 Sum_probs=44.2
Q ss_pred CCcHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q 023753 187 HGSSSTDAYYEKMIEAN--PGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGN 243 (277)
Q Consensus 187 Gd~deAi~~yekALeld--P~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~ 243 (277)
.....+...|..+.... -..+..|-.+|.++ +..|++.+|.+.|+++|+....-..
T Consensus 93 ~~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~l-E~~g~~~~A~~Vy~~GI~~~A~P~~ 150 (202)
T 3esl_A 93 NNFHESENTFKYMFNKGIGTKLSLFYEEFSKLL-ENAQFFLEAKVLLELGAENNCRPYN 150 (202)
T ss_dssp TCHHHHHHHHHHHHHHTSSTTBHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHTTCBSHH
T ss_pred cccCCHHHHHHHHHHCCCcHHHHHHHHHHHHHH-HHcCCHHHHHHHHHHHHHcCCccHH
Confidence 33567888888887755 45678888999888 4899999999999999998765443
No 319
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=38.34 E-value=49 Score=25.56 Aligned_cols=16 Identities=6% Similarity=-0.195 Sum_probs=9.7
Q ss_pred HhCCCcHHHHHHHHHH
Q 023753 184 NNNHGSSSTDAYYEKM 199 (277)
Q Consensus 184 e~~Gd~deAi~~yekA 199 (277)
...+.|++||.+.++|
T Consensus 26 l~~gkydeAIech~kA 41 (97)
T 2crb_A 26 LAAGKYEEAISCHRKA 41 (97)
T ss_dssp HHTTCHHHHHHHHHHH
T ss_pred HhcCCHHHHHHHHHHH
Confidence 3456666666666654
No 320
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=37.50 E-value=1.3e+02 Score=28.32 Aligned_cols=60 Identities=12% Similarity=0.092 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh-C-CCC----HHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 023753 209 LLGNYARFLKEVRGDFAKAEELCGRAILA-N-PSD----GNILSLYADLIWQAHKDASRAESYFDQAV 270 (277)
Q Consensus 209 al~nLA~lL~e~~Gd~eeA~e~~ekALel-d-P~n----~~al~~LA~ll~~~~Gd~deAi~~yekAL 270 (277)
....|+.++. ..|++.+|...+.....- . ..+ .+++.....+++. .+|+.+|..+++++.
T Consensus 139 l~~~La~i~e-~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~-~~d~~~a~~~~~ki~ 204 (445)
T 4b4t_P 139 VTKDLVEIKK-EEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSIL-KGDYSQATVLSRKIL 204 (445)
T ss_dssp HHHHHHHHHH-HHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-HccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHH
Confidence 3467888775 789999999999987542 1 112 3456667788888 899999999999974
No 321
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=36.79 E-value=42 Score=25.71 Aligned_cols=27 Identities=4% Similarity=-0.210 Sum_probs=16.7
Q ss_pred HHHHhCCCcHHHHHHHHHHHHhCCCCH
Q 023753 181 NYSNNNHGSSSTDAYYEKMIEANPGNA 207 (277)
Q Consensus 181 ~m~e~~Gd~deAi~~yekALeldP~n~ 207 (277)
..+...|+++.|+.+|-+||.+.|.-.
T Consensus 28 E~L~~~g~~e~av~Hf~nAl~Vc~qP~ 54 (95)
T 1om2_A 28 EELLAQGDYEKGVDHLTNAIAVCGQPQ 54 (95)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHSCHH
T ss_pred HHHHHCCCHHHHHHHHHHHHHHcCCHH
Confidence 334445667777777777777666533
No 322
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=36.49 E-value=75 Score=30.27 Aligned_cols=31 Identities=16% Similarity=0.269 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 023753 207 ALLLGNYARFLKEVRGDFAKAEELCGRAILAN 238 (277)
Q Consensus 207 ~~al~nLA~lL~e~~Gd~eeA~e~~ekALeld 238 (277)
..++..+|++|. ..+++++|+++++++|...
T Consensus 203 ~aA~allArvyL-~~~~~~~A~~~a~~vi~~~ 233 (495)
T 3lew_A 203 EVVLGILSRACL-YARQWEKAKTYSDKLLAKD 233 (495)
T ss_dssp HHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHH-HhhhHHHHHHHHHHHHhcC
Confidence 467888999886 7899999999999999864
No 323
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=35.97 E-value=87 Score=29.40 Aligned_cols=47 Identities=9% Similarity=0.012 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHhCCC--------CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 023753 225 AKAEELCGRAILANPS--------DGNILSLYADLIWQAHKDASRAESYFDQAVKS 272 (277)
Q Consensus 225 eeA~e~~ekALeldP~--------n~~al~~LA~ll~~~~Gd~deAi~~yekALel 272 (277)
+.-+.-++.|+..-|. -..|+..+|.+|+. ++++++|+++.+++|..
T Consensus 171 ~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allArvyL~-~~~~~~A~~~a~~vi~~ 225 (461)
T 3kez_A 171 TEIISDLKNSTELLSGDFNKGKVNRWAAMTLLSRVYLY-KGEYNEALTMAENAIKG 225 (461)
T ss_dssp HHHHHHHHHHHHHSCCSCCTTSCCHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCccccCCCeeeHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHhc
Confidence 3445555666655443 35678889999998 89999999999999864
No 324
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=35.00 E-value=1e+02 Score=28.90 Aligned_cols=47 Identities=21% Similarity=0.129 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHhCCC--------CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 023753 225 AKAEELCGRAILANPS--------DGNILSLYADLIWQAHKDASRAESYFDQAVKS 272 (277)
Q Consensus 225 eeA~e~~ekALeldP~--------n~~al~~LA~ll~~~~Gd~deAi~~yekALel 272 (277)
+..+.-++.|+..-|. -..|+..+|.+|+. ++++++|+++.+++|..
T Consensus 165 ~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~-~~~~~~A~~~a~~vi~~ 219 (454)
T 3myv_A 165 DFIIETLEEAVTLMSEEKNNGRMNKYAARALLARIYLY-HDDNRKAFDLADQLIKD 219 (454)
T ss_dssp HHHHHHHHHHHHHCCCSCCTTSCCHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccccCCeecHHHHHHHHHHHHHh-cccHHHHHHHHHHHHhC
Confidence 4455556666665443 35578889999999 99999999999999864
No 325
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=34.36 E-value=88 Score=29.29 Aligned_cols=47 Identities=17% Similarity=0.029 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHhCCC--------CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 023753 190 SSTDAYYEKMIEANPG--------NALLLGNYARFLKEVRGDFAKAEELCGRAILA 237 (277)
Q Consensus 190 deAi~~yekALeldP~--------n~~al~nLA~lL~e~~Gd~eeA~e~~ekALel 237 (277)
+..++.++.|+..-|. -..++..+|++|. ..+++++|+++++++|..
T Consensus 165 ~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL-~~~~~~~A~~~a~~vi~~ 219 (454)
T 3myv_A 165 DFIIETLEEAVTLMSEEKNNGRMNKYAARALLARIYL-YHDDNRKAFDLADQLIKD 219 (454)
T ss_dssp HHHHHHHHHHHHHCCCSCCTTSCCHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccccCCeecHHHHHHHHHHHHH-hcccHHHHHHHHHHHHhC
Confidence 3445555555554332 2467888899886 789999999999999964
No 326
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=34.15 E-value=19 Score=34.21 Aligned_cols=29 Identities=17% Similarity=0.013 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 023753 242 GNILSLYADLIWQAHKDASRAESYFDQAVK 271 (277)
Q Consensus 242 ~~al~~LA~ll~~~~Gd~deAi~~yekALe 271 (277)
..|+..+|.+|+. ++++++|+++.+++|.
T Consensus 191 ~aA~aLlARvyL~-~~~~~~A~~~a~~vi~ 219 (460)
T 3snx_A 191 DVVNGLMARAYLL-TGQWGEAAKAAEAARK 219 (460)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHH-hcCHHHHHHHHHHHHh
Confidence 4466667777777 7777777777777764
No 327
>2ca5_A MXIH; transport protein, type III secretion system, needle complex, protein transport, virulence; 2.10A {Shigella flexneri} SCOP: a.2.20.1 PDB: 2v6l_0 3j0r_A
Probab=34.10 E-value=41 Score=25.39 Aligned_cols=27 Identities=22% Similarity=0.313 Sum_probs=17.2
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 023753 222 GDFAKAEELCGRAILANPSDGNILSLY 248 (277)
Q Consensus 222 Gd~eeA~e~~ekALeldP~n~~al~~L 248 (277)
++..+++.-..++++.+|+||.++..|
T Consensus 24 ~~~~~~v~~Ai~~L~~~PsnPa~LAey 50 (85)
T 2ca5_A 24 QTLQGELTLALDKLAKNPSNPQLLAEY 50 (85)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCCHHHHHHH
Confidence 345556666666667777777766554
No 328
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=33.48 E-value=88 Score=29.37 Aligned_cols=30 Identities=17% Similarity=0.230 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 023753 207 ALLLGNYARFLKEVRGDFAKAEELCGRAILA 237 (277)
Q Consensus 207 ~~al~nLA~lL~e~~Gd~eeA~e~~ekALel 237 (277)
..++..+|+++. ..+++++|+++++++|..
T Consensus 196 ~aa~allArvyL-~~~~~~~A~~~a~~vi~~ 225 (461)
T 3kez_A 196 WAAMTLLSRVYL-YKGEYNEALTMAENAIKG 225 (461)
T ss_dssp HHHHHHHHHHHH-HHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HhCCHHHHHHHHHHHHhc
Confidence 567888899886 789999999999999974
No 329
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=30.05 E-value=77 Score=31.56 Aligned_cols=55 Identities=13% Similarity=0.070 Sum_probs=43.6
Q ss_pred HHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 023753 181 NYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAIL 236 (277)
Q Consensus 181 ~m~e~~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALe 236 (277)
.+....++++.|..+|+++-......+...|-+|..+. ..|+.++|..+|+++..
T Consensus 293 r~Alr~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~-~~g~~~~a~~~~~~~a~ 347 (618)
T 1qsa_A 293 RMALGTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLL-ERGREAEAKEILHQLMQ 347 (618)
T ss_dssp HHHHHHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHH-HTTCHHHHHHHHHHHHT
T ss_pred HHHHHCCCHHHHHHHHHHccccccccHhHHHHHHHHHH-HcCCHHHHHHHHHHHhc
Confidence 33445589999999998776544456777888898885 79999999999999875
No 330
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=29.96 E-value=1.2e+02 Score=29.03 Aligned_cols=60 Identities=7% Similarity=-0.074 Sum_probs=44.9
Q ss_pred HHHHhCCCcHHHHHHHHHHHHhCC--------CC--HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-CCCC
Q 023753 181 NYSNNNHGSSSTDAYYEKMIEANP--------GN--ALLLGNYARFLKEVRGDFAKAEELCGRAILA-NPSD 241 (277)
Q Consensus 181 ~m~e~~Gd~deAi~~yekALeldP--------~n--~~al~nLA~lL~e~~Gd~eeA~e~~ekALel-dP~n 241 (277)
++|.+.++..-+...++..-...+ .. ..++|-+|.++. ...+|.+|.+++..|+.. .|.+
T Consensus 184 kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q~v~Y~YYlGr~~~-~~~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 184 NIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQIEYRYLLGRYYL-LNSQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHcCCHHHHHHHHHHhccCCCCcChhhCCccceEeeeHHHHHHHH-HHccHHHHHHHHHHHHHhcCCcc
Confidence 677788888888888765433322 11 346677788776 799999999999999998 7765
No 331
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=27.88 E-value=53 Score=24.18 Aligned_cols=26 Identities=15% Similarity=0.109 Sum_probs=19.7
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 023753 211 GNYARFLKEVRGDFAKAEELCGRAILA 237 (277)
Q Consensus 211 ~nLA~lL~e~~Gd~eeA~e~~ekALel 237 (277)
..+|+=+. ..|+|+.|+.||+.+++.
T Consensus 16 ~k~ARe~A-l~GnYdta~~yY~g~~~q 41 (78)
T 2rpa_A 16 VKLAREYA-LLGNYDSAMVYYQGVLDQ 41 (78)
T ss_dssp HHHHHHHH-HHTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHH-HhcChHHHHHHHHHHHHH
Confidence 45566555 578999999999988864
No 332
>4ah2_B HLA class II histocompatibility antigen gamma CHA class II histocompatibility antigen\,DRB1-1...; MHC II, immune system, SELF antigen; 2.36A {Homo sapiens}
Probab=27.75 E-value=11 Score=32.74 Aligned_cols=15 Identities=47% Similarity=0.889 Sum_probs=2.6
Q ss_pred eeEEEecCCCCCCCC
Q 023753 141 VQTMVMGGGLGNNGG 155 (277)
Q Consensus 141 ~~~~~~ggg~g~~~g 155 (277)
+|+|-|||||.||||
T Consensus 11 ~~~~~~~~~~~~~~~ 25 (229)
T 4ah2_B 11 MQALPMGGGGSGGGG 25 (229)
T ss_dssp CCCC-----------
T ss_pred HhhcccCCCcCCCCC
Confidence 566778877655444
No 333
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=27.22 E-value=1e+02 Score=28.92 Aligned_cols=47 Identities=13% Similarity=0.044 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHhCCC--------CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 023753 191 STDAYYEKMIEANPG--------NALLLGNYARFLKEVRGDFAKAEELCGRAILAN 238 (277)
Q Consensus 191 eAi~~yekALeldP~--------n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeld 238 (277)
..++.++.|+..-|. -..++..+|++|. ..+++++|+++++++|...
T Consensus 178 ~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL-~~~~~~~A~~~a~~vi~~~ 232 (477)
T 3mcx_A 178 QVVSDMSNALSGLRQETSNGYINYWAAQALLSRVYL-NMGEYQKAYDAATDVIKNN 232 (477)
T ss_dssp HHHHHHHHHGGGSCSSCCTTSCCHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhCcccccCCcCcHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHhCC
Confidence 444445555544332 2467778888886 7889999999999998753
No 334
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=27.08 E-value=1.4e+02 Score=28.09 Aligned_cols=48 Identities=8% Similarity=-0.013 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHhCCC--------CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 023753 225 AKAEELCGRAILANPS--------DGNILSLYADLIWQAHKDASRAESYFDQAVKSA 273 (277)
Q Consensus 225 eeA~e~~ekALeldP~--------n~~al~~LA~ll~~~~Gd~deAi~~yekALeld 273 (277)
+.-++-++.|+..-|. -..|+..+|.+|+. ++++++|+++.+++|...
T Consensus 177 ~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~-~~~~~~A~~~a~~vi~~~ 232 (477)
T 3mcx_A 177 EQVVSDMSNALSGLRQETSNGYINYWAAQALLSRVYLN-MGEYQKAYDAATDVIKNN 232 (477)
T ss_dssp HHHHHHHHHHGGGSCSSCCTTSCCHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhCcccccCCcCcHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHhCC
Confidence 4445556666655442 35578889999999 999999999999999753
No 335
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=26.47 E-value=57 Score=24.03 Aligned_cols=26 Identities=12% Similarity=0.033 Sum_probs=20.4
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 023753 246 SLYADLIWQAHKDASRAESYFDQAVKS 272 (277)
Q Consensus 246 ~~LA~ll~~~~Gd~deAi~~yekALel 272 (277)
..+|.=+.. .|+|+.|+.||+.+++.
T Consensus 16 ~k~ARe~Al-~GnYdta~~yY~g~~~q 41 (78)
T 2rpa_A 16 VKLAREYAL-LGNYDSAMVYYQGVLDQ 41 (78)
T ss_dssp HHHHHHHHH-HTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-hcChHHHHHHHHHHHHH
Confidence 345666666 89999999999998864
No 336
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=26.16 E-value=2.7e+02 Score=25.25 Aligned_cols=27 Identities=19% Similarity=0.192 Sum_probs=24.4
Q ss_pred CCHHHHHHHHHHHHHHcCCHHHHHHHHH
Q 023753 240 SDGNILSLYADLIWQAHKDASRAESYFD 267 (277)
Q Consensus 240 ~n~~al~~LA~ll~~~~Gd~deAi~~ye 267 (277)
.+|..+..+|..|+. .+++.+|+.+|-
T Consensus 132 Gdp~LH~~~a~~~~~-e~~~~~A~~H~i 158 (312)
T 2wpv_A 132 GDPYLHNTIGSKLLE-GDFVYEAERYFM 158 (312)
T ss_dssp CCHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhh-cCCHHHHHHHHH
Confidence 488999999999999 999999999884
No 337
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=25.73 E-value=1.4e+02 Score=28.14 Aligned_cols=30 Identities=17% Similarity=0.132 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 023753 242 GNILSLYADLIWQAHKDASRAESYFDQAVKS 272 (277)
Q Consensus 242 ~~al~~LA~ll~~~~Gd~deAi~~yekALel 272 (277)
..|+..+|.+|+. .+++++|+++.+++|..
T Consensus 197 ~aA~allarvyL~-~~~~~~A~~~a~~vi~~ 226 (478)
T 3hdx_A 197 LSAYSVLAHICAW-QGNYAEAETYSAFIIDH 226 (478)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-HhhHHHHHHHHHHHHhC
Confidence 3578889999998 99999999999999964
No 338
>3pmr_A Amyloid-like protein 1; heparin binding, cell adhesion; 2.11A {Homo sapiens} SCOP: a.47.4.0 PDB: 3q7l_A 3q7g_A 3qmk_A*
Probab=24.04 E-value=1.8e+02 Score=25.51 Aligned_cols=54 Identities=11% Similarity=0.140 Sum_probs=37.1
Q ss_pred CcHHHHHHHHHHHHhCCCCHHHHH-HHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 023753 188 GSSSTDAYYEKMIEANPGNALLLG-NYARFLKEVRGDFAKAEELCGRAILANPSD 241 (277)
Q Consensus 188 d~deAi~~yekALeldP~n~~al~-nLA~lL~e~~Gd~eeA~e~~ekALeldP~n 241 (277)
+...|+..|..|++.+|-++.-.. .+=.++....+|-.=.+.+|+.+...||..
T Consensus 107 rrr~Ale~y~~ALq~~pP~~~~vl~aLk~yirae~KDR~Htl~hf~Hv~~~dpe~ 161 (219)
T 3pmr_A 107 QRRAALEGFLAALQADPPQAERVLLALRRYLRAEQKEQRHTLRHYQHVAAVDPEK 161 (219)
T ss_dssp HHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHhHHHHHHHHHccCHHH
Confidence 456899999999999988864333 333333323446666888999999888853
No 339
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=24.02 E-value=1e+02 Score=25.92 Aligned_cols=35 Identities=20% Similarity=0.059 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q 023753 208 LLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGN 243 (277)
Q Consensus 208 ~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~n~~ 243 (277)
.+++-+|.++. ..++|.+|.+++.+|+...|....
T Consensus 15 ~Y~YYlGr~~~-~~~~y~~A~~~L~~A~~~~~~~~~ 49 (203)
T 3t5x_A 15 TYKYYVGRKAM-FDSDFKQAEEYLSFAFEHCHRSSQ 49 (203)
T ss_dssp HHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSCTTCH
T ss_pred HHHHHHHHHHH-HHhCHHHHHHHHHHHHHHCCHhHH
Confidence 45666788776 789999999999999999887643
No 340
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=23.64 E-value=2.1e+02 Score=21.24 Aligned_cols=19 Identities=16% Similarity=0.211 Sum_probs=9.8
Q ss_pred cCCHHHHHHHHHHHHHhCC
Q 023753 221 RGDFAKAEELCGRAILANP 239 (277)
Q Consensus 221 ~Gd~eeA~e~~ekALeldP 239 (277)
.++|=+|-+.++.+-...|
T Consensus 14 ~g~~~eaHEvlE~~W~~~~ 32 (94)
T 2cwy_A 14 AGRYYEVHEVLEPYWLKAT 32 (94)
T ss_dssp TTCHHHHHHHHHHHHHHCC
T ss_pred CCChHHHHHHHHHHHhhCC
Confidence 4555555555555555443
No 341
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.57 E-value=47 Score=26.42 Aligned_cols=46 Identities=9% Similarity=-0.016 Sum_probs=33.5
Q ss_pred CCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 023753 186 NHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPS 240 (277)
Q Consensus 186 ~Gd~deAi~~yekALeldP~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALeldP~ 240 (277)
+..+++|..+..+||++|-. -.-..|. .-|.+++.+++++|.+..+
T Consensus 16 k~~h~~AF~~Is~AL~~DE~---g~k~~Al------~lYk~GI~eLe~Gl~I~~~ 61 (116)
T 2dl1_A 16 REAYKKAFLFVNKGLNTDEL---GQKEEAK------NYYKQGIGHLLRGISISSK 61 (116)
T ss_dssp HHHHHHHHHHHHHHHHHHHH---TCHHHHH------HHHHHHHHHHHHHHSSCCC
T ss_pred HHHHHHHHHHHHHHhhhhhc---CCHHHHH------HHHHHHHHHHHHhcccccc
Confidence 34678999999999999873 1112222 2368899999999999875
No 342
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=22.50 E-value=1.4e+02 Score=27.95 Aligned_cols=30 Identities=20% Similarity=0.156 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 023753 207 ALLLGNYARFLKEVRGDFAKAEELCGRAILA 237 (277)
Q Consensus 207 ~~al~nLA~lL~e~~Gd~eeA~e~~ekALel 237 (277)
..++..+|+++. ..+++++|+++++++|..
T Consensus 197 ~aA~allarvyL-~~~~~~~A~~~a~~vi~~ 226 (478)
T 3hdx_A 197 LSAYSVLAHICA-WQGNYAEAETYSAFIIDH 226 (478)
T ss_dssp HHHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HHhhHHHHHHHHHHHHhC
Confidence 467888899886 789999999999999975
No 343
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=22.46 E-value=2.9e+02 Score=22.79 Aligned_cols=52 Identities=10% Similarity=-0.043 Sum_probs=38.0
Q ss_pred CCCcHHHHHHHHHHHHhCCCC---HHHHH---H-HHH-HHHHHcCCHHHHHHHHHHHHHh
Q 023753 186 NHGSSSTDAYYEKMIEANPGN---ALLLG---N-YAR-FLKEVRGDFAKAEELCGRAILA 237 (277)
Q Consensus 186 ~Gd~deAi~~yekALeldP~n---~~al~---n-LA~-lL~e~~Gd~eeA~e~~ekALel 237 (277)
.++|=+|-+.++.+....+.. ..+|. . +|. ++....++..-|...+.+|+..
T Consensus 45 ~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~~ 104 (161)
T 2ijq_A 45 SGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQY 104 (161)
T ss_dssp TTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 499999999999999887655 22222 2 222 2334679999999999999883
No 344
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=21.38 E-value=1.6e+02 Score=28.26 Aligned_cols=46 Identities=7% Similarity=0.042 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHhC-----CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 023753 191 STDAYYEKMIEAN-----PGNALLLGNYARFLKEVRGDFAKAEELCGRAILA 237 (277)
Q Consensus 191 eAi~~yekALeld-----P~n~~al~nLA~lL~e~~Gd~eeA~e~~ekALel 237 (277)
.++.+|.+||... -.+...+.-+|.+++ ..+++.+|+.++..|-..
T Consensus 275 ~~l~L~~~AI~sa~~yY~n~HvYPYtylgGy~y-R~~~~reAl~~WA~Aa~V 325 (472)
T 3re2_A 275 PAEELFKEAITVAKREYSDHHIYPYTYLGGYYY-RKKKYYEAIASWVDAGYV 325 (472)
T ss_dssp CHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhccCCccchhhhhhhhh-hcchHHHHHHHHHHHHHH
Confidence 4778888887752 233444555666676 789999999999887654
No 345
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=20.76 E-value=1.7e+02 Score=27.73 Aligned_cols=46 Identities=15% Similarity=0.007 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHhCCC-----------CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 023753 226 KAEELCGRAILANPS-----------DGNILSLYADLIWQAHKDASRAESYFDQAVKS 272 (277)
Q Consensus 226 eA~e~~ekALeldP~-----------n~~al~~LA~ll~~~~Gd~deAi~~yekALel 272 (277)
.-++-++.|+..-|. -..|+..+|.+|+. .+++++|+++.+++|..
T Consensus 155 ~I~~dL~~A~~~Lp~~~~~~~~gr~tk~aA~allarv~L~-~~~~~~A~~~a~~vi~~ 211 (517)
T 3qnk_A 155 FILEDLKKATEMLPASYGSREKGRATKGAAYALKSRVELY-DKRYEDVIKSCAEVYKL 211 (517)
T ss_dssp HHHHHHHHHHHHSCSCCCSTTTTSCCHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhCccccCCcccCcccHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHh
Confidence 344455556554442 24578889999999 99999999999999863
No 346
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=20.18 E-value=1.4e+02 Score=28.07 Aligned_cols=31 Identities=19% Similarity=0.230 Sum_probs=26.7
Q ss_pred CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 023753 206 NALLLGNYARFLKEVRGDFAKAEELCGRAILA 237 (277)
Q Consensus 206 n~~al~nLA~lL~e~~Gd~eeA~e~~ekALel 237 (277)
-..++..+|+++. ..+++++|+++++++|..
T Consensus 190 k~aA~aLlARvyL-~~~~~~~A~~~a~~vi~~ 220 (460)
T 3snx_A 190 TDVVNGLMARAYL-LTGQWGEAAKAAEAARKG 220 (460)
T ss_dssp HHHHHHHHHHHHH-HTTCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHH-HhcCHHHHHHHHHHHHhc
Confidence 3567888999886 789999999999999864
Done!