BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023757
(277 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5M7X9|MUL1A_DANRE Mitochondrial ubiquitin ligase activator of nfkb 1-A OS=Danio rerio
GN=mul1a PE=2 SV=1
Length = 341
Score = 87.8 bits (216), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 114/286 (39%), Gaps = 31/286 (10%)
Query: 1 MRSFLRQSRVSINSRSWTERHFLKHNDAGS-WIQDSALMLSMSKEVPW-YLDDGTGCVFV 58
+RS ++S V + + H L N G W ++L VP+ L V V
Sbjct: 76 LRSQFQESSVGVIQKLVLREHKLVWNSLGRIWTDSERVLLQRVNAVPFNLLGLNKSFVRV 135
Query: 59 VGARGATGFALTVGSEVFEESGRSLVHGTLDYLQGLKMLGVKRIGRLLPTGTSLTVVGEA 118
+ ATG + + E F ++ YL G K G +L G SLTVVGE
Sbjct: 136 LCPLEATGPKMEIVHEKFHQATYGFTDLIGQYLSGEKPKGQLETEEMLKVGASLTVVGEL 195
Query: 119 VKDDIGTVRIQRPHKGP-FYVSPKTIDELL-ENLGKWARWYKYASFGLTIFGAFLI--AK 174
+ D ++I+ P G +++S + LL E G+ W +A A LI +
Sbjct: 196 ILDTDRLLKIRPPTDGSEYFLSSADFETLLMEQEGQAEVWRVFACICALAGVAVLIWTGR 255
Query: 175 RVIRCILQRKRRWELR--RRVLAAAAVQRSEQDNEGTNGQAENGSDSTQRDRVMPDLCVI 232
R R Q K RWE RR E+DN N CVI
Sbjct: 256 RYYR---QLKLRWEQENLRREFEGMGTGEREEDNGVENA------------------CVI 294
Query: 233 CLEQEYNAVFFPCGHLCCCLICSSRLTN--CPLCRRRIDQVVRTFR 276
CL V CGH+CCC C L CP+CR+ I +VV ++
Sbjct: 295 CLSNPRGCVLLDCGHVCCCFRCYQALPQPFCPICRQHIKRVVPLYQ 340
>sp|Q6NTT6|MUL1_XENLA Mitochondrial ubiquitin ligase activator of nfkb 1 OS=Xenopus
laevis GN=mul1 PE=2 SV=1
Length = 353
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 114/257 (44%), Gaps = 27/257 (10%)
Query: 31 WIQDSALMLSMSKEVPWYL---DDGTGCVFVVGARG--ATGFALTVGSEVFEESGRSLVH 85
W ++ S VP+ L + G V V R A L E F + +S +
Sbjct: 110 WNDHEKIIHQRSNTVPFDLAPENPGESGVSVRVLRPLEAVDLGLETIYEKFHPAVQSFSN 169
Query: 86 GTLDYLQGLKMLGVKRIGRLLPTGTSLTVVGEAVKDDIGTVRIQRPHKGP-FYVSPKTID 144
Y+ G + GV+ +L G ++T VGE V D+ T+++Q P G FY+S +
Sbjct: 170 ILGHYMTGERPKGVQETEEMLKIGATITGVGELVLDN-KTIKLQPPKDGMLFYLSSMDYE 228
Query: 145 ELLENLGKWARWYKYAS--FGL-TIFGAFLIAKRVIRCILQRKRRWELRRRVLAAAAVQR 201
LLE RW++ S FG+ + F I +R R +++ L+R + A QR
Sbjct: 229 GLLEKQEVQMRWWRILSIVFGVASCITLFFILRRKYRHYKEKQHLKNLQREFEESRARQR 288
Query: 202 SEQDNEGTNGQAENGSDSTQRDRVMPDLCVICLEQEYNAVFFPCGHLCCCLICSSRLTN- 260
+Q+ Q + + C ICL E + VF CGH+C C+ C L +
Sbjct: 289 VQQE--------------PQNKEEVQNPCSICLSTEKSCVFLECGHVCSCISCYQALPSP 334
Query: 261 --CPLCRRRIDQVVRTF 275
CP+CR ID++V +
Sbjct: 335 KKCPICRNFIDRIVPLY 351
>sp|Q969V5|MUL1_HUMAN Mitochondrial ubiquitin ligase activator of NFKB 1 OS=Homo sapiens
GN=MUL1 PE=1 SV=1
Length = 352
Score = 82.4 bits (202), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 122/283 (43%), Gaps = 26/283 (9%)
Query: 4 FLRQSRVSINSRSWTERHFLKHNDAGSWIQDSALMLSMSKEVPWYL---DDGTG-CVFVV 59
F+ + I + E + + W S ++ + VP+ L +DG V V+
Sbjct: 83 FVENCKGVIQRLTLQEHKMVWNRTTHLWNDCSKIIHQRTNTVPFDLVPHEDGVDVAVRVL 142
Query: 60 GARGATGFALTVGSEVFEESGRSLVHGTLDYLQGLKMLGVKRIGRLLPTGTSLTVVGEAV 119
+ L E F S +S Y+ G + G++ +L G +LT VGE V
Sbjct: 143 KPLDSVDLGLETVYEKFHPSIQSFTDVIGHYISGERPKGIQETEEMLKVGATLTGVGELV 202
Query: 120 KDDIGTVRIQRPHKG-PFYVSPKTIDELLENLGKWARWYKYAS--FGLTIFGAFLIAKRV 176
D+ +VR+Q P +G +Y+S + D LL+ R +K + FG R
Sbjct: 203 LDN-NSVRLQPPKQGMQYYLSSQDFDSLLQRQESSVRLWKVLALVFGFATCATLFFILR- 260
Query: 177 IRCILQRKRRWELRRRVLAAAAVQRSEQDNEGTNGQAENGSDSTQRDR-VMPDLCVICLE 235
+ LQR+ R L++ +Q Q++E A+ S + DR + CV+CL
Sbjct: 261 -KQYLQRQERLRLKQ-------MQEEFQEHE-----AQLLSRAKPEDRESLKSACVVCLS 307
Query: 236 QEYNAVFFPCGHLCCCLICSSRLT---NCPLCRRRIDQVVRTF 275
+ VF CGH+C C C L CP+CR+ I +V+ +
Sbjct: 308 SFKSCVFLECGHVCSCTECYRALPEPKKCPICRQAITRVIPLY 350
>sp|Q4R7G8|MUL1_MACFA Mitochondrial ubiquitin ligase activator of NFKB 1 OS=Macaca
fascicularis GN=MUL1 PE=2 SV=1
Length = 352
Score = 82.0 bits (201), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 122/283 (43%), Gaps = 26/283 (9%)
Query: 4 FLRQSRVSINSRSWTERHFLKHNDAGSWIQDSALMLSMSKEVPWYL---DDGTG-CVFVV 59
F+ + I + E + + W S ++ + VP+ L +DG V V+
Sbjct: 83 FVENCKGVIQRLTLQEHKMVWNRTTHLWNDCSKIIHQRTNTVPFDLVPHEDGVDVAVRVL 142
Query: 60 GARGATGFALTVGSEVFEESGRSLVHGTLDYLQGLKMLGVKRIGRLLPTGTSLTVVGEAV 119
+ L E F S +S Y+ G + G++ +L G +LT VGE V
Sbjct: 143 KPLDSVDLGLEAVYEKFHPSIQSFTDVIGHYISGERPKGIQETEEMLKVGATLTGVGELV 202
Query: 120 KDDIGTVRIQRPHKG-PFYVSPKTIDELLENLGKWARWYKYAS--FGLTIFGAFLIAKRV 176
D+ +VR+Q P +G +Y+S + D LL+ R +K + FG R
Sbjct: 203 LDN-NSVRLQPPKQGMQYYLSSQDFDSLLQRQESSVRLWKVLALVFGFATCATLFFILR- 260
Query: 177 IRCILQRKRRWELRRRVLAAAAVQRSEQDNEGTNGQAENGSDSTQRDR-VMPDLCVICLE 235
+ LQR+ R L++ +Q Q++E A+ S + DR + CV+CL
Sbjct: 261 -KQYLQRQERLRLKQ-------MQEEFQEHE-----AQLLSRAKPEDRESLKSACVVCLS 307
Query: 236 QEYNAVFFPCGHLCCCLICSSRLT---NCPLCRRRIDQVVRTF 275
+ VF CGH+C C C L CP+CR+ I +V+ +
Sbjct: 308 SFKSCVFLECGHVCSCTECYRALPEPKKCPICRQAITRVIPLY 350
>sp|Q8VCM5|MUL1_MOUSE Mitochondrial ubiquitin ligase activator of NFKB 1 OS=Mus musculus
GN=Mul1 PE=2 SV=2
Length = 352
Score = 74.7 bits (182), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 118/282 (41%), Gaps = 24/282 (8%)
Query: 4 FLRQSRVSINSRSWTERHFLKHNDAGSWIQDSALMLSMSKEVPWYL---DDGTGC-VFVV 59
F+ + I S E + + W S ++ + VP+ L +DG V V+
Sbjct: 83 FVENCKGVIQRLSLQEHKMVWNRTTHLWNDYSKIIHQRTNTVPFDLVPHEDGVAVSVRVL 142
Query: 60 GARGATGFALTVGSEVFEESGRSLVHGTLDYLQGLKMLGVKRIGRLLPTGTSLTVVGEAV 119
+ L E F S +S Y+ G + G++ +L G +LT +GE V
Sbjct: 143 KPLDSVDLGLETVYEKFHPSVQSFTDAIGHYISGERPKGIQETEEMLKVGATLTGIGELV 202
Query: 120 KDDIGTVRIQRPHKG-PFYVSPKTIDELLENLGKWARWYKYASFGLTIFGAFLIAKRVIR 178
D+ VR+Q P +G +Y+S + D LL R +K + +FG A
Sbjct: 203 LDN-NAVRLQPPKQGMQYYLSSQDFDSLLHRQESSVRLWKIL---VLVFGFATCATLF-- 256
Query: 179 CILQRKRRWELRRRVLAAAAVQRSEQDNEG-TNGQAENGSDSTQRDR-VMPDLCVICLEQ 236
+ LR++ L R +Q E +A+ S ++ DR + CV+CL
Sbjct: 257 --------FILRKQYLHRQERLRQQQLQEEFLEHEAQLLSQASPEDRESLKSACVVCLSN 308
Query: 237 EYNAVFFPCGHLCCCLICSSRLTN---CPLCRRRIDQVVRTF 275
+ VF CGH+C C C L CP+CRR I +V+ +
Sbjct: 309 FKSCVFLECGHVCSCRQCYLALPEPKRCPICRREITRVIPLY 350
>sp|Q557E7|CBLA_DICDI E3 ubiquitin-protein ligase cblA OS=Dictyostelium discoideum
GN=cblA-1 PE=1 SV=1
Length = 665
Score = 72.4 bits (176), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 6/66 (9%)
Query: 211 GQAENGSDSTQRDRVMPDLCVICLEQEYNAVFFPCGHLCCCLICSSRLTNCPLCRRRIDQ 270
NGSD ++ DLC +C++ E N VF CGHL CC +CS +L CP+CR RI +
Sbjct: 605 NNNNNGSDESK------DLCTVCMDNEINTVFLECGHLSCCSLCSVKLKKCPICRSRITR 658
Query: 271 VVRTFR 276
V+ F+
Sbjct: 659 VINIFK 664
>sp|Q7XI08|XB34_ORYSJ Probable E3 ubiquitin-protein ligase XBOS34 OS=Oryza sativa subsp.
japonica GN=XBOS34 PE=2 SV=1
Length = 513
Score = 61.2 bits (147), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 205 DNEGTNGQAENGSDSTQRDRVMPDLCVICLEQEYNAVFFPCGHLCCCLIC----SSRLTN 260
+NEG AE+ ++++ P CVICL+ PCGH+ C+ C S+
Sbjct: 437 ENEGDAKPAESDANASNSGNTPPGTCVICLDAPVEGACIPCGHMAGCMSCLKDIESKKWG 496
Query: 261 CPLCRRRIDQVVRTF 275
CP+CR +I+Q++R +
Sbjct: 497 CPICRAKINQIIRLY 511
>sp|Q24306|IAP1_DROME Apoptosis 1 inhibitor OS=Drosophila melanogaster GN=th PE=1 SV=2
Length = 438
Score = 61.2 bits (147), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 208 GTNGQAENGSDSTQRDRVMPDLCVICLEQEYNAVFFPCGHLCCCLICSSRLTNCPLCRRR 267
T +GS S ++ LC IC EYN F PCGH+ C C+S +T CPLCR+
Sbjct: 373 ATPSTNSSGSTSIPEEK----LCKICYGAEYNTAFLPCGHVVACAKCASSVTKCPLCRKP 428
Query: 268 IDQVVRTF 275
V+R +
Sbjct: 429 FTDVMRVY 436
>sp|D3ZDI6|MYLIP_RAT E3 ubiquitin-protein ligase MYLIP OS=Rattus norvegicus GN=Mylip
PE=2 SV=1
Length = 445
Score = 60.8 bits (146), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 9/66 (13%)
Query: 219 STQRDRVMPD---------LCVICLEQEYNAVFFPCGHLCCCLICSSRLTNCPLCRRRID 269
S Q+ RV+ + LC++C E+E N+ F PCGH CC C+++L +CP+CR R++
Sbjct: 367 SCQQTRVLQEKLRKLKEAMLCMVCCEEEINSTFCPCGHTVCCESCAAQLQSCPVCRSRVE 426
Query: 270 QVVRTF 275
V +
Sbjct: 427 HVQHVY 432
>sp|Q8WY64|MYLIP_HUMAN E3 ubiquitin-protein ligase MYLIP OS=Homo sapiens GN=MYLIP PE=1
SV=2
Length = 445
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 9/66 (13%)
Query: 219 STQRDRVMPD---------LCVICLEQEYNAVFFPCGHLCCCLICSSRLTNCPLCRRRID 269
S Q+ RV+ + LC++C E+E N+ F PCGH CC C+++L +CP+CR R++
Sbjct: 367 SCQQTRVLQEKLRKLKEAMLCMVCCEEEINSTFCPCGHTVCCESCAAQLQSCPVCRSRVE 426
Query: 270 QVVRTF 275
V +
Sbjct: 427 HVQHVY 432
>sp|Q24307|IAP2_DROME Apoptosis 2 inhibitor OS=Drosophila melanogaster GN=Iap2 PE=2 SV=3
Length = 498
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 30/47 (63%)
Query: 229 LCVICLEQEYNAVFFPCGHLCCCLICSSRLTNCPLCRRRIDQVVRTF 275
LC +CL++E VF PCGHL C C+ + NCP+CR I VRTF
Sbjct: 450 LCKVCLDEEVGVVFLPCGHLATCNQCAPSVANCPMCRADIKGFVRTF 496
>sp|Q8BM54|MYLIP_MOUSE E3 ubiquitin-protein ligase MYLIP OS=Mus musculus GN=Mylip PE=1
SV=1
Length = 445
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 9/66 (13%)
Query: 219 STQRDRVMPD---------LCVICLEQEYNAVFFPCGHLCCCLICSSRLTNCPLCRRRID 269
S Q+ RV+ + LC+ C E+E N+ F PCGH CC C+++L +CP+CR R++
Sbjct: 367 SCQQTRVLQEKLRKLKEAMLCMACCEEEINSTFCPCGHTVCCESCAAQLQSCPVCRSRVE 426
Query: 270 QVVRTF 275
V +
Sbjct: 427 HVQHVY 432
>sp|Q6TEM9|MYLIA_DANRE E3 ubiquitin-protein ligase MYLIP-A OS=Danio rerio GN=mylipa PE=1
SV=2
Length = 472
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 33/47 (70%)
Query: 229 LCVICLEQEYNAVFFPCGHLCCCLICSSRLTNCPLCRRRIDQVVRTF 275
LC++C E+E +A F PCGH+ CC C+++L +CP+CR ++ V +
Sbjct: 383 LCMLCCEEEIDAAFCPCGHMVCCQNCAAQLQSCPVCRSEVEHVQHVY 429
>sp|Q05AK5|MYLIB_DANRE E3 ubiquitin-protein ligase MYLIP-B OS=Danio rerio GN=mylipb PE=2
SV=1
Length = 464
Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 31/46 (67%)
Query: 230 CVICLEQEYNAVFFPCGHLCCCLICSSRLTNCPLCRRRIDQVVRTF 275
C +C EQE +A F PCGH+ CC C+S+L CP+CR +D+V +
Sbjct: 381 CALCCEQEISAAFCPCGHMFCCYNCASQLQCCPVCRSEVDRVQHVY 426
>sp|O76050|NEU1A_HUMAN Neuralized-like protein 1A OS=Homo sapiens GN=NEURL PE=2 SV=1
Length = 574
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 36/77 (46%), Gaps = 11/77 (14%)
Query: 211 GQAENGSDSTQRDRVMP------DLCVICLEQEYNAVFFPCGHLCCCLICSSRLTN---- 260
G A N S V P D C IC E + V + CGH+C C C RL
Sbjct: 496 GTAPNSPVSLPESPVTPGLGQWSDECTICYEHAVDTVIYTCGHMCLCYACGLRLKKALHA 555
Query: 261 -CPLCRRRIDQVVRTFR 276
CP+CRR I +++T+R
Sbjct: 556 CCPICRRPIKDIIKTYR 572
>sp|Q923S6|NEU1A_MOUSE Neuralized-like protein 1A OS=Mus musculus GN=Neurl PE=1 SV=1
Length = 574
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 36/77 (46%), Gaps = 11/77 (14%)
Query: 211 GQAENGSDSTQRDRVMP------DLCVICLEQEYNAVFFPCGHLCCCLICSSRLTN---- 260
G A N S V P D C IC E + V + CGH+C C C RL
Sbjct: 496 GTAPNSPVSLPESPVTPGLGQWSDECTICYEHAVDTVIYTCGHMCLCYSCGLRLKKALHA 555
Query: 261 -CPLCRRRIDQVVRTFR 276
CP+CRR I +++T+R
Sbjct: 556 CCPICRRPIKDIIKTYR 572
>sp|Q13489|BIRC3_HUMAN Baculoviral IAP repeat-containing protein 3 OS=Homo sapiens
GN=BIRC3 PE=1 SV=2
Length = 604
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%)
Query: 230 CVICLEQEYNAVFFPCGHLCCCLICSSRLTNCPLCRRRIDQVVRTF 275
C +C+++E + VF PCGHL C C+ L CP+CR I VRTF
Sbjct: 557 CKVCMDKEVSIVFIPCGHLVVCKDCAPSLRKCPICRSTIKGTVRTF 602
>sp|O08863|BIRC3_MOUSE Baculoviral IAP repeat-containing protein 3 OS=Mus musculus
GN=Birc3 PE=1 SV=2
Length = 600
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 229 LCVICLEQEYNAVFFPCGHLCCCLICSSRLTNCPLCRRRIDQVVRTF 275
+C +C+++E + VF PCGHL C C+ L CP+CR I VRTF
Sbjct: 552 MCKVCMDREVSIVFIPCGHLVVCKDCAPSLRKCPICRGTIKGTVRTF 598
>sp|Q13490|BIRC2_HUMAN Baculoviral IAP repeat-containing protein 2 OS=Homo sapiens
GN=BIRC2 PE=1 SV=2
Length = 618
Score = 55.1 bits (131), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%)
Query: 230 CVICLEQEYNAVFFPCGHLCCCLICSSRLTNCPLCRRRIDQVVRTF 275
C +C+++E + VF PCGHL C C+ L CP+CR I VRTF
Sbjct: 571 CKVCMDKEVSVVFIPCGHLVVCQECAPSLRKCPICRGIIKGTVRTF 616
>sp|Q90660|BIR_CHICK Inhibitor of apoptosis protein OS=Gallus gallus GN=ITA PE=2 SV=1
Length = 611
Score = 55.1 bits (131), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%)
Query: 230 CVICLEQEYNAVFFPCGHLCCCLICSSRLTNCPLCRRRIDQVVRTF 275
C +C+++E + VF PCGHL C C+ L CP+CR I VRTF
Sbjct: 564 CKVCMDKEVSIVFIPCGHLVVCKECAPSLRKCPICRGTIKGTVRTF 609
>sp|Q62210|BIRC2_MOUSE Baculoviral IAP repeat-containing protein 2 OS=Mus musculus
GN=Birc2 PE=1 SV=1
Length = 612
Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%)
Query: 230 CVICLEQEYNAVFFPCGHLCCCLICSSRLTNCPLCRRRIDQVVRTF 275
C +C+++E + VF PCGHL C C+ L CP+CR I VRTF
Sbjct: 565 CKVCMDREVSIVFIPCGHLVVCQECAPSLRKCPICRGTIKGTVRTF 610
>sp|P41437|IAP3_NPVOP E3 ubiquitin-protein ligase IAP-3 OS=Orgyia pseudotsugata
multicapsid polyhedrosis virus GN=IAP3 PE=1 SV=1
Length = 268
Score = 54.3 bits (129), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 51/123 (41%), Gaps = 24/123 (19%)
Query: 154 ARWYKYASFGLTIFGAFLIAKRVIRCILQRKRRWELRRRVLAAAAVQRSEQDNEGTNGQA 213
ARWY + L + G + +RV+ A V R + A
Sbjct: 169 ARWYDRCEYVLLVKGRDFV------------------QRVMTEACVVRDADNEPHIERPA 210
Query: 214 ENGSDSTQRDRVMPDLCVICLEQEYNAVFFPCGHLCCCLICSSRLTNCPLCRRRIDQVVR 273
+ R LC ICL E F PCGH+ C C++ +T CP+CR ++D+ VR
Sbjct: 211 VEAEVADDR------LCKICLGAEKTVCFVPCGHVVACGKCAAGVTTCPVCRGQLDKAVR 264
Query: 274 TFR 276
++
Sbjct: 265 MYQ 267
>sp|O62640|PIAP_PIG Putative inhibitor of apoptosis OS=Sus scrofa GN=PIAP PE=2 SV=1
Length = 358
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%)
Query: 230 CVICLEQEYNAVFFPCGHLCCCLICSSRLTNCPLCRRRIDQVVRTF 275
C +C+++E + VF PCGHL C C+ L CP+CR I VRTF
Sbjct: 311 CKVCMDKEVSIVFIPCGHLVVCKDCAPSLRKCPICRGTIKGTVRTF 356
>sp|A1E2V0|BIRC3_CANFA Baculoviral IAP repeat-containing protein 3 OS=Canis familiaris
GN=BIRC3 PE=2 SV=1
Length = 604
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%)
Query: 230 CVICLEQEYNAVFFPCGHLCCCLICSSRLTNCPLCRRRIDQVVRTF 275
C +C+++E + VF PCGHL C C+ L CP+CR + VRTF
Sbjct: 557 CKVCMDKEVSIVFIPCGHLVVCRDCAPSLRKCPICRGTVRGTVRTF 602
>sp|Q95M71|BIRC8_GORGO Baculoviral IAP repeat-containing protein 8 OS=Gorilla gorilla
gorilla GN=BIRC8 PE=2 SV=1
Length = 236
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 39/82 (47%)
Query: 194 LAAAAVQRSEQDNEGTNGQAENGSDSTQRDRVMPDLCVICLEQEYNAVFFPCGHLCCCLI 253
L +A +E ++ T+ Q E + R LC IC+++ VF PCGHL C
Sbjct: 153 LVSAQKDTTENESNQTSLQREISPEEPLRRLQEEKLCKICMDRHIAVVFIPCGHLVTCKQ 212
Query: 254 CSSRLTNCPLCRRRIDQVVRTF 275
C+ + CP+C ID R F
Sbjct: 213 CAEAVDRCPMCNAVIDFKQRVF 234
>sp|Q84ME1|LUL3_ARATH Probable E3 ubiquitin-protein ligase LUL3 OS=Arabidopsis thaliana
GN=LUL3 PE=1 SV=1
Length = 378
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 54/116 (46%), Gaps = 18/116 (15%)
Query: 171 LIAKRVIRCILQRKRRWELRRRVLAAAAVQRSEQ---------DNEGTNGQAENGSDSTQ 221
L+ K++ + +L++ + +V+ E+ DN T G A +G + T
Sbjct: 258 LVHKQITQAVLEKTNDGSFKVKVMKQILWIEGERYELQELYGIDNSITQGTAASGLEDTG 317
Query: 222 RDRVMPDLCVICLEQEYNAVFFPCGHLCCCLICSSRL---TN-CPLCRRRIDQVVR 273
CVICL + + PC HLC C C+ L TN CP+CR+ I ++V+
Sbjct: 318 GKE-----CVICLTEPKDTAVMPCRHLCLCSDCAEELRFQTNKCPICRQPIHELVK 368
>sp|Q9FPH0|XB34_ARATH Putative E3 ubiquitin-protein ligase XBAT34 OS=Arabidopsis thaliana
GN=XBAT34 PE=2 SV=1
Length = 376
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 229 LCVICLEQEYNAVFFPCGHLCCCLICSSRLTN----CPLCRRRIDQVVRTF 275
LCVIC++ AV PCGH+ C+ C + N CP+CR IDQV++ +
Sbjct: 324 LCVICVDAPSEAVCVPCGHVAGCISCLKEIENKKMGCPVCRANIDQVIKLY 374
>sp|Q6ZQM0|RFFL_MOUSE E3 ubiquitin-protein ligase rififylin OS=Mus musculus GN=Rffl PE=1
SV=1
Length = 377
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 43/96 (44%), Gaps = 11/96 (11%)
Query: 185 RRWELRRRVLAAAAVQRSEQD----NEGTNGQAENGSDSTQRDRVMPDLCVICLEQEYNA 240
+WEL RV Q+ Q NE NG A + +LC IC++ +
Sbjct: 288 EKWELMERVTRLYKDQKGLQHLVSGNEDQNGGAVPSG-------LEENLCKICMDSPIDC 340
Query: 241 VFFPCGHLCCCLICSSRLTNCPLCRRRIDQVVRTFR 276
V CGH+ C C R+ CP+CR+ + + V FR
Sbjct: 341 VLLECGHMVTCTKCGKRMNECPICRQYVIRAVHVFR 376
>sp|Q95M72|BIRC8_PANTR Baculoviral IAP repeat-containing protein 8 OS=Pan troglodytes
GN=BIRC8 PE=2 SV=1
Length = 236
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 39/82 (47%)
Query: 194 LAAAAVQRSEQDNEGTNGQAENGSDSTQRDRVMPDLCVICLEQEYNAVFFPCGHLCCCLI 253
L +A +E ++ T+ Q E + R LC IC+++ VF PCGHL C
Sbjct: 153 LVSAQKDTTENESNQTSLQREISPEEPLRRLQDEKLCKICMDRHIAVVFIPCGHLVTCKQ 212
Query: 254 CSSRLTNCPLCRRRIDQVVRTF 275
C+ + CP+C ID R F
Sbjct: 213 CAEAVDRCPMCSAVIDFKQRVF 234
>sp|Q8JHV9|BIR7A_XENLA Baculoviral IAP repeat-containing protein 7-A OS=Xenopus laevis
GN=birc7-a PE=1 SV=1
Length = 401
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 229 LCVICLEQEYNAVFFPCGHLCCCLICSSRLTNCPLCRRRIDQVVRTF 275
+C +C++++ + +F PCGHL C C+ L +CP+CR I VR F
Sbjct: 353 MCKVCMDKDVSMLFVPCGHLVVCTECAPNLRHCPICRAAIRGSVRAF 399
>sp|Q8CIN9|RFFL_RAT E3 ubiquitin-protein ligase rififylin OS=Rattus norvegicus GN=Rffl
PE=1 SV=1
Length = 362
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 43/96 (44%), Gaps = 11/96 (11%)
Query: 185 RRWELRRRVLAAAAVQRSEQD----NEGTNGQAENGSDSTQRDRVMPDLCVICLEQEYNA 240
+WEL RV Q+ Q NE NG A + +LC IC++ +
Sbjct: 273 EKWELMERVTRLYKDQKGLQHLVSGNEDQNGGAVPSG-------LEENLCKICMDSPIDC 325
Query: 241 VFFPCGHLCCCLICSSRLTNCPLCRRRIDQVVRTFR 276
V CGH+ C C R+ CP+CR+ + + V FR
Sbjct: 326 VLLECGHMVTCTKCGKRMNECPICRQYVIRAVHVFR 361
>sp|Q4FE47|XB35_ARATH Putative E3 ubiquitin-protein ligase XBAT35 OS=Arabidopsis thaliana
GN=XBAT35 PE=2 SV=1
Length = 462
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 230 CVICLEQEYNAVFFPCGHLCCCLIC----SSRLTNCPLCRRRIDQVVRTFR 276
C ICL+ AV PCGH+ C+ C S+ CP+CR +IDQV++ +R
Sbjct: 411 CAICLDAPSEAVCVPCGHVAGCMSCLKEIKSKNWGCPVCRAKIDQVIKLYR 461
>sp|A9ULZ2|BIR7B_XENLA Baculoviral IAP repeat-containing protein 7-B OS=Xenopus laevis
GN=birc7-b PE=2 SV=2
Length = 345
Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 229 LCVICLEQEYNAVFFPCGHLCCCLICSSRLTNCPLCRRRIDQVVRTF 275
+C +C++++ + +F PCGHL C C+ L +CP+CR I VR F
Sbjct: 297 MCKVCMDKDVSMLFVPCGHLVVCTECAPNLRHCPICRAAIRGSVRAF 343
>sp|A9JTP3|BIRC7_XENTR Baculoviral IAP repeat-containing protein 7 OS=Xenopus tropicalis
GN=birc7 PE=2 SV=1
Length = 365
Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 229 LCVICLEQEYNAVFFPCGHLCCCLICSSRLTNCPLCRRRIDQVVRTF 275
+C +C++ + + VF PCGHL C C+ L +CP+CR I VR F
Sbjct: 317 MCKVCMDNDVSMVFVPCGHLVVCTECAPNLRHCPICRAAIRGSVRAF 363
>sp|Q96P09|BIRC8_HUMAN Baculoviral IAP repeat-containing protein 8 OS=Homo sapiens
GN=BIRC8 PE=1 SV=2
Length = 236
Score = 51.6 bits (122), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 38/82 (46%)
Query: 194 LAAAAVQRSEQDNEGTNGQAENGSDSTQRDRVMPDLCVICLEQEYNAVFFPCGHLCCCLI 253
L +A +E + T+ Q E + R LC IC+++ VF PCGHL C
Sbjct: 153 LVSAQKDTTENELNQTSLQREISPEEPLRRLQEEKLCKICMDRHIAVVFIPCGHLVTCKQ 212
Query: 254 CSSRLTNCPLCRRRIDQVVRTF 275
C+ + CP+C ID R F
Sbjct: 213 CAEAVDRCPMCSAVIDFKQRVF 234
>sp|Q6AYH3|RNF34_RAT E3 ubiquitin-protein ligase RNF34 OS=Rattus norvegicus GN=Rnf34
PE=1 SV=1
Length = 381
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 8/91 (8%)
Query: 186 RWELRRRVLAAAAVQRSEQDNEGTNGQAENGSDSTQRDRVMPDLCVICLEQEYNAVFFPC 245
+WEL +V Q + G Q ++ D + LC IC++ + V C
Sbjct: 298 KWELVEKVNRLYKENEENQKSYGERMQLQDEEDDS--------LCRICMDAVIDCVLLEC 349
Query: 246 GHLCCCLICSSRLTNCPLCRRRIDQVVRTFR 276
GH+ C C R++ CP+CR+ + + V F+
Sbjct: 350 GHMVTCTKCGKRMSECPICRQYVVRAVHVFK 380
>sp|Q7M3S9|RNGB_DICDI RING finger protein B OS=Dictyostelium discoideum GN=rngB PE=2 SV=2
Length = 943
Score = 50.1 bits (118), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 25/47 (53%)
Query: 230 CVICLEQEYNAVFFPCGHLCCCLICSSRLTNCPLCRRRIDQVVRTFR 276
CVIC N V PC H C C S+LT CP+CR I+ + ++
Sbjct: 897 CVICASNPPNIVLLPCRHSSLCSDCCSKLTKCPICRSHIENKISIYQ 943
>sp|Q99KR6|RNF34_MOUSE E3 ubiquitin-protein ligase RNF34 OS=Mus musculus GN=Rnf34 PE=1
SV=1
Length = 376
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 8/91 (8%)
Query: 186 RWELRRRVLAAAAVQRSEQDNEGTNGQAENGSDSTQRDRVMPDLCVICLEQEYNAVFFPC 245
+WEL +V Q + G Q ++ D + LC IC++ + V C
Sbjct: 293 KWELVEKVNRLYKENEENQKSYGERMQLQDEEDDS--------LCRICMDAVIDCVLLEC 344
Query: 246 GHLCCCLICSSRLTNCPLCRRRIDQVVRTFR 276
GH+ C C R++ CP+CR+ + + V F+
Sbjct: 345 GHMVTCTKCGKRMSECPICRQYVVRAVHVFK 375
>sp|Q8WZ73|RFFL_HUMAN E3 ubiquitin-protein ligase rififylin OS=Homo sapiens GN=RFFL PE=1
SV=1
Length = 363
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 13/97 (13%)
Query: 185 RRWELRRRVLAAAAVQRSEQDNEGTNGQAENGSDSTQRDRVMP-----DLCVICLEQEYN 239
+WEL RV R +D +G D Q +P +LC IC++ +
Sbjct: 274 EKWELMERVT------RLYKDQKGLQHLVSGAED--QNGGAVPSGLEENLCKICMDSPID 325
Query: 240 AVFFPCGHLCCCLICSSRLTNCPLCRRRIDQVVRTFR 276
V CGH+ C C R+ CP+CR+ + + V FR
Sbjct: 326 CVLLECGHMVTCTKCGKRMNECPICRQYVIRAVHVFR 362
>sp|A8MQ27|NEU1B_HUMAN E3 ubiquitin-protein ligase NEURL1B OS=Homo sapiens GN=NEURL1B PE=1
SV=1
Length = 555
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Query: 230 CVICLEQEYNAVFFPCGHLCCCLICSSRLTN-----CPLCRRRIDQVVRTFR 276
C +C + E + V + CGH+C C C RL CP+CRR I V++ +R
Sbjct: 503 CTVCFDGEVDTVIYTCGHMCLCHSCGLRLKRQARACCPICRRPIKDVIKIYR 554
>sp|Q0MW30|NEU1B_MOUSE E3 ubiquitin-protein ligase NEURL1B OS=Mus musculus GN=Neurl1b PE=1
SV=1
Length = 546
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Query: 230 CVICLEQEYNAVFFPCGHLCCCLICSSRLTN-----CPLCRRRIDQVVRTFR 276
C +C + E + V + CGH+C C C RL CP+CRR I V++ +R
Sbjct: 494 CTVCFDSEVDTVIYTCGHMCLCHGCGLRLRRQARACCPICRRPIKDVIKIYR 545
>sp|Q5E9J6|RNF34_BOVIN E3 ubiquitin-protein ligase RNF34 OS=Bos taurus GN=RNF34 PE=2 SV=1
Length = 375
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 8/91 (8%)
Query: 186 RWELRRRVLAAAAVQRSEQDNEGTNGQAENGSDSTQRDRVMPDLCVICLEQEYNAVFFPC 245
+WEL +V Q + G Q ++ D + LC IC++ + V C
Sbjct: 292 KWELVEKVNRLYKENEENQKSYGERLQLQDEEDDS--------LCRICMDAVIDCVLLEC 343
Query: 246 GHLCCCLICSSRLTNCPLCRRRIDQVVRTFR 276
GH+ C C R++ CP+CR+ + + V F+
Sbjct: 344 GHMVTCTKCGKRMSECPICRQYVVRAVHVFK 374
>sp|Q5NVC7|RNF34_PONAB E3 ubiquitin-protein ligase RNF34 OS=Pongo abelii GN=RNF34 PE=2
SV=2
Length = 372
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 8/91 (8%)
Query: 186 RWELRRRVLAAAAVQRSEQDNEGTNGQAENGSDSTQRDRVMPDLCVICLEQEYNAVFFPC 245
+WEL +V Q + G Q ++ D + LC IC++ + V C
Sbjct: 289 KWELVEKVNRLYKENEENQKSYGERLQLQDEEDDS--------LCRICMDAVIDCVLLEC 340
Query: 246 GHLCCCLICSSRLTNCPLCRRRIDQVVRTFR 276
GH+ C C R++ CP+CR+ + + V F+
Sbjct: 341 GHMVTCTKCGKRMSECPICRQYVVRAVHVFK 371
>sp|Q969K3|RNF34_HUMAN E3 ubiquitin-protein ligase RNF34 OS=Homo sapiens GN=RNF34 PE=1
SV=1
Length = 372
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 8/91 (8%)
Query: 186 RWELRRRVLAAAAVQRSEQDNEGTNGQAENGSDSTQRDRVMPDLCVICLEQEYNAVFFPC 245
+WEL +V Q + G Q ++ D + LC IC++ + V C
Sbjct: 289 KWELVEKVNRLYKENEENQKSYGERLQLQDEEDDS--------LCRICMDAVIDCVLLEC 340
Query: 246 GHLCCCLICSSRLTNCPLCRRRIDQVVRTFR 276
GH+ C C R++ CP+CR+ + + V F+
Sbjct: 341 GHMVTCTKCGKRMSECPICRQYVVRAVHVFK 371
>sp|Q8BUH7|RNF26_MOUSE Ring finger protein 26 OS=Mus musculus GN=Rnf26 PE=2 SV=1
Length = 424
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 41/97 (42%), Gaps = 12/97 (12%)
Query: 188 ELRRRVLAAAAVQRSEQDNEG--TNGQAENGSDSTQRDRVMPDLCVICLEQEYNAVFFPC 245
E V+ A + EQ NE GQ Q +R CVIC +Q + PC
Sbjct: 330 EAEEEVIRTAPARGREQLNEDEPAAGQDPWKLLKEQEER---KKCVICQDQSKTVLLLPC 386
Query: 246 GHLCCCLICSSRLT-------NCPLCRRRIDQVVRTF 275
HLC C C+ L NCPLCRR I Q + +
Sbjct: 387 RHLCLCQACTEILMRHPVYHRNCPLCRRSILQTLNVY 423
>sp|Q80ZI6|LRSM1_MOUSE E3 ubiquitin-protein ligase LRSAM1 OS=Mus musculus GN=Lrsam1 PE=2
SV=1
Length = 727
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 30/46 (65%)
Query: 230 CVICLEQEYNAVFFPCGHLCCCLICSSRLTNCPLCRRRIDQVVRTF 275
CV+CLE+E VF CGH+CCC C L CPLCR+ I Q +R +
Sbjct: 679 CVVCLEREAQMVFLTCGHVCCCQQCCQPLRTCPLCRQEISQRLRIY 724
>sp|Q804S5|MIB1_DANRE E3 ubiquitin-protein ligase mib1 OS=Danio rerio GN=mib1 PE=1 SV=1
Length = 1030
Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 36/62 (58%)
Query: 207 EGTNGQAENGSDSTQRDRVMPDLCVICLEQEYNAVFFPCGHLCCCLICSSRLTNCPLCRR 266
E T+GQ + S S + + C++C + + + +F PCGH+ C +CS R+ C +C+
Sbjct: 794 EKTSGQVGSRSPSLNSNNETLEECMVCSDMKRDTLFGPCGHIATCSLCSPRVKKCLICKE 853
Query: 267 RI 268
++
Sbjct: 854 QV 855
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 29/49 (59%)
Query: 222 RDRVMPDLCVICLEQEYNAVFFPCGHLCCCLICSSRLTNCPLCRRRIDQ 270
+ R + CV+C +++ +F PCGH+C C C+S + C CR +++
Sbjct: 856 QSRTKIEECVVCSDKKAAVLFQPCGHMCACENCASLMKKCVQCRAVVER 904
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 198 AVQRSEQDNEGTNGQAENGSDSTQRDRVMPDLCVICLEQEYNAVFFPCGHLCCCLICSSR 257
A+QR ++DN N + Q D +C +CL++ N +F CGH C L C R
Sbjct: 957 ALQR-DKDNTNVNADVQKLQQQLQ-DIKEQTMCPVCLDRLKNMIFM-CGHGTCQL-CGDR 1012
Query: 258 LTNCPLCRRRIDQVVRTF 275
++ CP+CR+ I++ + +
Sbjct: 1013 MSECPICRKAIERRILLY 1030
>sp|Q9VUX2|MIB_DROME E3 ubiquitin-protein ligase mind-bomb OS=Drosophila melanogaster
GN=mib1 PE=1 SV=3
Length = 1226
Score = 48.1 bits (113), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Query: 210 NGQAENGSDSTQRD----RVMPDLCVICLEQEYNAVFFPCGHLCCCLICSSRLTNCPLCR 265
NG A S S D D C++C + + + VF PCGH+ CC C+ R+ C +CR
Sbjct: 946 NGIANEMSQSLHEDPPKSSASLDECLVCSDAKRDTVFKPCGHVSCCETCAPRVKKCLICR 1005
Query: 266 RRI 268
+
Sbjct: 1006 ETV 1008
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 220 TQRDRVMPDLCVICLEQEYNAVFFPCGHLCCCLICSSRLTNCPLCRRRIDQVV 272
+ R+++ D C++C ++ F PCGH+ C CS+ + C LCR +ID+++
Sbjct: 1009 SSREKI--DECLVCSDRRAAVFFRPCGHMVACEHCSALMKKCVLCRTQIDEIL 1059
Score = 38.5 bits (88), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 229 LCVICLEQEYNAVFFPCGHLCCCLICSSRLTNCPLCRRRIDQVVRTF 275
+C +C ++ N VF CGH C +C ++ CP+CR+ +++ + F
Sbjct: 1182 MCPVCFDRIKNMVFL-CGH-GTCQMCGDQIEGCPICRKTVEKRILLF 1226
>sp|Q6R7I2|IAP1_OSHVF Putative apoptosis inhibitor ORF42 OS=Ostreid herpesvirus 1
(isolate France) GN=ORF42 PE=4 SV=1
Length = 364
Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 230 CVICLEQEYNAVFFPCGHLCCCLICSSRLTNCPLCRRRIDQVVRT 274
CVICL + + + PC H C CS+++ CPLCR++I++ V+T
Sbjct: 315 CVICLGAKADTILKPCLHYSLCYGCSTQVQKCPLCRKKIEKRVQT 359
>sp|O60291|MGRN1_HUMAN E3 ubiquitin-protein ligase MGRN1 OS=Homo sapiens GN=MGRN1 PE=1
SV=2
Length = 552
Score = 47.8 bits (112), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 29/63 (46%), Gaps = 6/63 (9%)
Query: 207 EGTNGQAENGSDSTQRDRVMPDLCVICLEQEYNAVFFPCGHLCCCLICSSRL----TNCP 262
E N Q SD D + CV+CL + + PC HLC C C+ L NCP
Sbjct: 257 ENKNNQETKPSDDENSDNS--NECVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANNCP 314
Query: 263 LCR 265
+CR
Sbjct: 315 ICR 317
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.138 0.438
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,103,023
Number of Sequences: 539616
Number of extensions: 4224089
Number of successful extensions: 14470
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 127
Number of HSP's successfully gapped in prelim test: 205
Number of HSP's that attempted gapping in prelim test: 14213
Number of HSP's gapped (non-prelim): 379
length of query: 277
length of database: 191,569,459
effective HSP length: 116
effective length of query: 161
effective length of database: 128,974,003
effective search space: 20764814483
effective search space used: 20764814483
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 60 (27.7 bits)