BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023760
(277 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P53602|MVD1_HUMAN Diphosphomevalonate decarboxylase OS=Homo sapiens GN=MVD PE=1 SV=1
Length = 400
Score = 233 bits (593), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 128/272 (47%), Positives = 167/272 (61%), Gaps = 18/272 (6%)
Query: 7 QSQLSAIARQGSGSACRSLFGGFVKWILGKEGNGSDSLAVQLVDEEHWNDLVIIIAVVSS 66
+S LS +AR+GSGSACRSL+GGFV+W +G++ +G DS+A Q+ E HW +L ++I VVS+
Sbjct: 145 ESDLSEVARRGSGSACRSLYGGFVEWQMGEQADGKDSIARQVAPESHWPELRVLILVVSA 204
Query: 67 RQKETSSTTGMRESVETSLLLQHRAKEVVPKRIVQMEEAIQNHDFSSFAQLTCADSNQFH 126
+K T ST GMR SVETS LL+ RA+ VVP R+ +M I+ DF SFAQLT DSNQFH
Sbjct: 205 EKKLTGSTVGMRASVETSPLLRFRAESVVPARMAEMARCIRERDFPSFAQLTMKDSNQFH 264
Query: 127 AVCLDTSPPIFYMNDTSHRIISYVERWNRSVGSPQVAYTFDAGPNAVLIARNRKIATELL 186
A CLDT PPI Y+N S RII V R+N G +VAYTFDAGPNAV+ + +A E +
Sbjct: 265 ATCLDTFPPISYLNAISWRIIHLVHRFNAHHGDTKVAYTFDAGPNAVIFTLDDTVA-EFV 323
Query: 187 QRLLFFFPPNSETDLNSYVLGDKSILRDAGIDGMKDIEALPLPPEIN-NISAQKYSGDVN 245
+ FPP S D + G++ + PL E+ ++ + G V
Sbjct: 324 AAVWHGFPPGSNG--------------DTFLKGLQ-VRPAPLSAELQAALAMEPTPGGVK 368
Query: 246 YFICTRPGGGPVLLSDDSKALLNPKSGLPKEA 277
Y I T+ G GP +L D LL P GLPK A
Sbjct: 369 YIIVTQVGPGPQILDDPCAHLLGP-DGLPKPA 399
>sp|Q5U403|MVD1_DANRE Diphosphomevalonate decarboxylase OS=Danio rerio GN=mvd PE=2 SV=1
Length = 400
Score = 232 bits (591), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 123/271 (45%), Positives = 170/271 (62%), Gaps = 16/271 (5%)
Query: 7 QSQLSAIARQGSGSACRSLFGGFVKWILGKEGNGSDSLAVQLVDEEHWNDLVIIIAVVSS 66
+ +LS +ARQGSGSACRSL+GGFV+W LG++ +G DS+A Q+ E +W +L ++I VVS+
Sbjct: 144 EGELSGVARQGSGSACRSLYGGFVQWKLGEQSDGKDSIAEQVASELYWPELRVLILVVSA 203
Query: 67 RQKETSSTTGMRESVETSLLLQHRAKEVVPKRIVQMEEAIQNHDFSSFAQLTCADSNQFH 126
QK ST+GM SVETS LL++RA VVP R+ +M AI+ DF F +LT DSNQFH
Sbjct: 204 EQKSVGSTSGMHTSVETSHLLKYRADAVVPGRMEEMIRAIRLRDFPKFGELTMKDSNQFH 263
Query: 127 AVCLDTSPPIFYMNDTSHRIISYVERWNRSVGSPQVAYTFDAGPNAVLIARNRKIATELL 186
A+CLDT PPIFY+N+ SH+IIS V R+N+ G +VAYTFDAGPNAV+ + + E +
Sbjct: 264 AICLDTYPPIFYLNNISHQIISLVHRYNQYYGETRVAYTFDAGPNAVIYSLQDYLP-EFV 322
Query: 187 QRLLFFFPPNSETDLNSYVLGDKSILRDAGIDGMKDIEALPLPPEINNISAQKYSGDVNY 246
+ + FFPP E + + G D + ++DI P P + Y
Sbjct: 323 EVVRHFFPP--EVNEEEFFKGLPVCPADLSEEMIRDINMKPTP------------NGIRY 368
Query: 247 FICTRPGGGPVLLSDDSKALLNPKSGLPKEA 277
I T+ G GP ++ D + LL GLPK++
Sbjct: 369 MISTKAGPGPRVVEDPNLHLLG-ADGLPKKS 398
>sp|Q99JF5|MVD1_MOUSE Diphosphomevalonate decarboxylase OS=Mus musculus GN=Mvd PE=1 SV=2
Length = 401
Score = 229 bits (584), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 127/272 (46%), Positives = 167/272 (61%), Gaps = 22/272 (8%)
Query: 7 QSQLSAIARQGSGSACRSLFGGFVKWILGKEGNGSDSLAVQLVDEEHWNDLVIIIAVVSS 66
+ LS +AR+GSGSACRSL+GGFV+W +G++ +G DS+A Q+ E HW L I+I VVS+
Sbjct: 146 EGDLSEVARRGSGSACRSLYGGFVEWQMGEQADGKDSIARQIAPEWHWPQLRILILVVSA 205
Query: 67 RQKETSSTTGMRESVETSLLLQHRAKEVVPKRIVQMEEAIQNHDFSSFAQLTCADSNQFH 126
+K+T ST GM+ SVETS LL+ RA+ VVP+R+ +M IQ DF FAQLT DSNQFH
Sbjct: 206 DKKQTGSTVGMQTSVETSTLLKFRAESVVPERMKEMTRCIQEQDFQGFAQLTMKDSNQFH 265
Query: 127 AVCLDTSPPIFYMNDTSHRIISYVERWNRSVGSPQVAYTFDAGPNAVLIARNRKIATELL 186
A CLDT PPI Y+NDTS RII V R+N G +VAYTFDAGPNAV+ +A E +
Sbjct: 266 ATCLDTFPPISYLNDTSRRIIQLVHRFNTHQGQTKVAYTFDAGPNAVIFTLEDTVA-EFV 324
Query: 187 QRLLFFFPPNSETDLNSYVLGDKSILRDAGIDGMKDIEALP--LPPEIN-NISAQKYSGD 243
+ FPP + GDK +K ++ P L E+ ++ + G
Sbjct: 325 AAVRHSFPPAAN--------GDKF---------LKGLQVAPVLLSDELKAALAVEPSPGG 367
Query: 244 VNYFICTRPGGGPVLLSDDSKALLNPKSGLPK 275
V Y I T+ G GP +L D LL + GLP+
Sbjct: 368 VQYIIATQVGPGPQVLDDTHDHLLG-QDGLPQ 398
>sp|Q62967|MVD1_RAT Diphosphomevalonate decarboxylase OS=Rattus norvegicus GN=Mvd PE=2
SV=1
Length = 401
Score = 228 bits (581), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 125/272 (45%), Positives = 167/272 (61%), Gaps = 22/272 (8%)
Query: 7 QSQLSAIARQGSGSACRSLFGGFVKWILGKEGNGSDSLAVQLVDEEHWNDLVIIIAVVSS 66
+ LS +AR+GSGSACRSL+GGFV+W +G++ +G DS+A Q+ E HW L ++I VVS+
Sbjct: 146 EGDLSEVARRGSGSACRSLYGGFVEWQMGEQADGKDSIARQIAPEWHWPQLRVLILVVSA 205
Query: 67 RQKETSSTTGMRESVETSLLLQHRAKEVVPKRIVQMEEAIQNHDFSSFAQLTCADSNQFH 126
+K T ST GM+ SV TS LL+ RA+ +VP+R+ +M IQ DF +FAQLT DSNQFH
Sbjct: 206 EKKPTGSTVGMQTSVATSTLLKFRAESIVPERMKEMTRCIQEQDFQAFAQLTMKDSNQFH 265
Query: 127 AVCLDTSPPIFYMNDTSHRIISYVERWNRSVGSPQVAYTFDAGPNAVLIARNRKIATELL 186
A CLDT PPI Y+NDTS RII V R+N G +VAYTFDAGPNAV+ +A E +
Sbjct: 266 ATCLDTFPPISYLNDTSRRIIQLVHRFNAHHGQTKVAYTFDAGPNAVIFTLEDTVA-EFV 324
Query: 187 QRLLFFFPPNSETDLNSYVLGDKSILRDAGIDGMKDIEALP--LPPEI-NNISAQKYSGD 243
+ FPP + GDK +K ++ P L E+ +++ + G
Sbjct: 325 AAVRHSFPPAAN--------GDKF---------LKGLQVAPVLLSDELKTSLATEPSPGG 367
Query: 244 VNYFICTRPGGGPVLLSDDSKALLNPKSGLPK 275
V Y I T+ G GP +L D LL P GLP+
Sbjct: 368 VQYIIATQVGPGPQVLDDPHHHLLGP-DGLPQ 398
>sp|Q0P570|MVD1_BOVIN Diphosphomevalonate decarboxylase OS=Bos taurus GN=MVD PE=2 SV=1
Length = 400
Score = 225 bits (573), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 121/270 (44%), Positives = 163/270 (60%), Gaps = 16/270 (5%)
Query: 8 SQLSAIARQGSGSACRSLFGGFVKWILGKEGNGSDSLAVQLVDEEHWNDLVIIIAVVSSR 67
S LS +AR+GSGSACRSL+GGFV+W +G+ +G DS+A Q+ E HW +L ++I VVS+
Sbjct: 146 SDLSEVARRGSGSACRSLYGGFVEWQMGERPDGKDSVACQVAPESHWPELRVLILVVSAE 205
Query: 68 QKETSSTTGMRESVETSLLLQHRAKEVVPKRIVQMEEAIQNHDFSSFAQLTCADSNQFHA 127
+K ST GM+ SVETS LL+ RA+ +VP R+ +M I+ +F +F QLT DSNQFHA
Sbjct: 206 RKPMGSTAGMQTSVETSALLKFRAEALVPPRMAEMTRCIRERNFQAFGQLTMKDSNQFHA 265
Query: 128 VCLDTSPPIFYMNDTSHRIISYVERWNRSVGSPQVAYTFDAGPNAVLIARNRKIATELLQ 187
CLDT PPI Y++DTS RII V R+N G +VAYTFDAGPNAV+ + +A E +
Sbjct: 266 TCLDTFPPISYLSDTSRRIIQLVHRFNAHHGQTKVAYTFDAGPNAVVFTLDDTVA-EFVA 324
Query: 188 RLLFFFPPNSETDLNSYVLGDKSILRDAGIDGMKDIEALPLPPEINNISAQKYSGDVNYF 247
+ FPP S D L + +L + + ++ +P G + Y
Sbjct: 325 AVRHSFPPESNGDKFLKGLPVEPVLLSDELKAVLGMDPVP--------------GSIRYI 370
Query: 248 ICTRPGGGPVLLSDDSKALLNPKSGLPKEA 277
I T+ G GP +L D LL P GLPK A
Sbjct: 371 IATQVGPGPQVLDDPGAHLLGP-DGLPKPA 399
>sp|Q54YQ9|MVD1_DICDI Diphosphomevalonate decarboxylase OS=Dictyostelium discoideum
GN=mvd PE=3 SV=1
Length = 391
Score = 214 bits (545), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 115/269 (42%), Positives = 170/269 (63%), Gaps = 15/269 (5%)
Query: 10 LSAIARQGSGSACRSLFGGFVKWILGKEGNGSDSLAVQLVDEEHWNDLVIIIAVVSSRQK 69
+S IAR GSGSACRS++GGFVKW +G + +GSDS+AVQ+ E HW D+ II+ VV+ ++K
Sbjct: 134 ISGIARLGSGSACRSMYGGFVKWEMGTKDDGSDSIAVQVQPESHWPDMNIIVLVVNDKKK 193
Query: 70 ETSSTTGMRESVETSLLLQHRAKEVVPKRIVQMEEAIQNHDFSSFAQLTCADSNQFHAVC 129
ETSST GM++S TS++++ R VP R+ +EEAI DF +F +T DS+ FH VC
Sbjct: 194 ETSSTDGMQKSAATSVMMKERCAVTVPNRMRDIEEAINKKDFQTFGDITMKDSDDFHEVC 253
Query: 130 LDTSPPIFYMNDTSHRIISYVERWNRSVGSPQVAYTFDAGPNAVLIARNRKIATELLQRL 189
T+PPI+Y+NDTS I++ + R+N+ GS + AYTFDAGPNA I + TE+L
Sbjct: 254 ATTTPPIYYLNDTSRYIMNLIHRYNKLSGSIKCAYTFDAGPNAC-IYLPAESTTEVLSLF 312
Query: 190 LFFFPPNSETDLNSYVLGDKSILRDAGIDGMKDIEALP--LPPEINNISAQKYSGDVNYF 247
+ FP + D+ +Y G K + I+ E L P+ +++ K Y
Sbjct: 313 MKHFPGD---DMQTYYRGPKENI--PSIENFVPSEKLASLYTPDTTFVNSLK------YI 361
Query: 248 ICTRPGGGPVLLSDDSKALLNPKSGLPKE 276
+ T+ G GP +LS +S++L++ +GLPK+
Sbjct: 362 LHTKVGPGPQILS-ESESLIDNTTGLPKQ 389
>sp|O13963|MVD1_SCHPO Diphosphomevalonate decarboxylase OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=mvd1 PE=3 SV=1
Length = 393
Score = 209 bits (531), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 117/268 (43%), Positives = 163/268 (60%), Gaps = 25/268 (9%)
Query: 8 SQLSAIARQGSGSACRSLFGGFVKWILGKEGNGSDSLAVQLVDEEHWNDLVIIIAVVSSR 67
+QLS IARQGSGSACRSLFGG+V W +G+ +G+DS+AVQ+ E+W ++ + + V S+
Sbjct: 146 TQLSRIARQGSGSACRSLFGGYVAWEMGELHSGADSVAVQVEPVENWPEIRVAVLVASAA 205
Query: 68 QKETSSTTGMRESVETSLLLQHRAKEVVPKRIVQMEEAIQNHDFSSFAQLTCADSNQFHA 127
+K SST GM+ +V +S L QHR + +VP+RI +M+ AI+ DF +FA+LT DSNQFHA
Sbjct: 206 KKGVSSTAGMQATVASSTLFQHRIQNIVPQRIQEMKTAIRERDFETFAKLTMTDSNQFHA 265
Query: 128 VCLDTSPPIFYMNDTSHRIISYVERWNRSVGSPQVAYTFDAGPNAVLIARNRKIATELLQ 187
CLDT PPIFY+NDTS +I VE N + G AYTFDAGPNAV
Sbjct: 266 CCLDTFPPIFYLNDTSRAVIRVVENINATAGKTIAAYTFDAGPNAV-------------- 311
Query: 188 RLLFFFPPNSETDLNSYVLGDKSILRDAGIDGMKDIEALPLPPEINNISAQKYSGDVNYF 247
++F NSE LN+ ++ ++A +G + P +++ +A S ++
Sbjct: 312 --IYFLEENSEIVLNTLY----AVTKNA--EGWSK-QYGSSPVTVDSAAANIVSSGISRV 362
Query: 248 ICTRPGGGPVLLSDDSKALLNPKSGLPK 275
I TR G GP +L+ D L SG PK
Sbjct: 363 ILTRVGNGPRVLTIDES--LIDASGNPK 388
>sp|Q6BY07|MVD1_DEBHA Diphosphomevalonate decarboxylase OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=MVD1 PE=3 SV=2
Length = 388
Score = 208 bits (529), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 123/273 (45%), Positives = 165/273 (60%), Gaps = 26/273 (9%)
Query: 3 LKENQSQLSAIARQGSGSACRSLFGGFVKWILGKEGNGSDSLAVQLVDEEHWNDLVIIIA 62
L +N S++S IAR+GSGSACRSLFGG+V W +G+E NG DS AV++ HW ++ I
Sbjct: 138 LPQNMSEISKIARKGSGSACRSLFGGYVAWEMGQETNGEDSKAVEVAPLSHWPNMKAAIL 197
Query: 63 VVSSRQKETSSTTGMRESVETSLLLQHRAKEVVPKRIVQMEEAIQNHDFSSFAQLTCADS 122
VVS +K+T ST+GM+ +V TS L Q R KEVVPKR M+++I DF++F LT DS
Sbjct: 198 VVSDDKKDTPSTSGMQTTVATSDLFQWRIKEVVPKRFDDMKDSILRKDFATFGDLTMKDS 257
Query: 123 NQFHAVCLDTSPPIFYMNDTSHRIISYVERWNRSVGSPQVAYTFDAGPNAVLIARNRKIA 182
N FHAVCLD++PPIFY+NDTS +II + N+ G AYTFDAGPNAV I ++
Sbjct: 258 NSFHAVCLDSTPPIFYLNDTSKKIIKLIHELNKREGKIIAAYTFDAGPNAV-IYYEQENE 316
Query: 183 TELLQRLLFFFPPNSETDLNSYVLGDKSILRDAGIDGMKDIEALPLPPEINNISAQKYSG 242
+++L + +F S V G + L +D DI+A P + Y G
Sbjct: 317 SKVLGVIYKYF---------SKVSGWEK-LDTKTLDTTSDIQADP----------ELYKG 356
Query: 243 DVNYFICTRPGGGPVLLSDDSKALLNPKSGLPK 275
V+ I T G GP S++L+N K GLPK
Sbjct: 357 -VSKIILTEVGQGP---QGSSESLINDK-GLPK 384
>sp|P32377|MVD1_YEAST Diphosphomevalonate decarboxylase OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=MVD1 PE=1 SV=2
Length = 396
Score = 205 bits (522), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 120/280 (42%), Positives = 162/280 (57%), Gaps = 27/280 (9%)
Query: 3 LKENQSQLSAIARQGSGSACRSLFGGFVKWILGKEGNGSDSLAVQLVDEEHWNDLVIIIA 62
L ++ S++S IAR+GSGSACRSLFGG+V W +GK +G DS+AVQ+ D W + +
Sbjct: 138 LPQSTSEISRIARKGSGSACRSLFGGYVAWEMGKAEDGHDSMAVQIADSSDWPQMKACVL 197
Query: 63 VVSSRQKETSSTTGMRESVETSLLLQHRAKEVVPKRIVQMEEAIQNHDFSSFAQLTCADS 122
VVS +K+ SST GM+ +V TS L + R + VVPKR M +AI DF++FA+ T DS
Sbjct: 198 VVSDIKKDVSSTQGMQLTVATSELFKERIEHVVPKRFEVMRKAIVEKDFATFAKETMMDS 257
Query: 123 NQFHAVCLDTSPPIFYMNDTSHRIISYVERWNRSVGSPQVAYTFDAGPNAVL--IARNRK 180
N FHA CLD+ PPIFYMNDTS RIIS+ N+ G VAYTFDAGPNAVL +A N
Sbjct: 258 NSFHATCLDSFPPIFYMNDTSKRIISWCHTINQFYGETIVAYTFDAGPNAVLYYLAENES 317
Query: 181 IATELLQRLLFFFPPNSETDLNSYVLGDKSILRDAGIDGMKDIEALPLPPEINNISAQ-- 238
+ +L P DK + +EA E +N +A+
Sbjct: 318 KLFAFIYKLFGSVPG-----------WDKKFTTE-------QLEAFNHQFESSNFTAREL 359
Query: 239 --KYSGDVNYFICTRPGGGPVLLSDDSKALLNPKSGLPKE 276
+ DV I T+ G GP + +++L++ K+GLPKE
Sbjct: 360 DLELQKDVARVILTQVGSGP---QETNESLIDAKTGLPKE 396
>sp|Q751D8|MVD1_ASHGO Diphosphomevalonate decarboxylase OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=MVD1
PE=3 SV=2
Length = 397
Score = 203 bits (516), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 120/277 (43%), Positives = 162/277 (58%), Gaps = 21/277 (7%)
Query: 3 LKENQSQLSAIARQGSGSACRSLFGGFVKWILGKEGNGSDSLAVQLVDEEHWNDLVIIIA 62
L ++ S++S IAR+GSGSACRSL+GG+V W +G E +GSDS AVQ+ D EHW ++ I
Sbjct: 138 LPQDYSEISKIARKGSGSACRSLYGGYVAWEMGAEADGSDSRAVQIADVEHWPEMRAAIL 197
Query: 63 VVSSRQKETSSTTGMRESVETSLLLQHRAKEVVPKRIVQMEEAIQNHDFSSFAQLTCADS 122
VVS+ +K+T ST+GM+++V TS L + R VVP+R +M AI+ DF++FA+LT DS
Sbjct: 198 VVSADRKDTPSTSGMQQTVHTSDLFKERVATVVPRRYGEMAAAIRARDFATFARLTMQDS 257
Query: 123 NQFHAVCLDTSPPIFYMNDTSHRIISYVERWNRSVGSPQVAYTFDAGPNAVL--IARNRK 180
N FHA CLD+ PPIFYMNDTS RI+ N VAYTFDAGPNAVL +A N
Sbjct: 258 NSFHATCLDSFPPIFYMNDTSRRIVKLCHLINEFYNETIVAYTFDAGPNAVLYYLAENE- 316
Query: 181 IATELLQRLLFFFPPNS--ETDLNSYVLGDKSILRDAGIDGMKDIEALPLPPEINNISAQ 238
L L F N ET ++ + D + G A L E++
Sbjct: 317 --ARLCGFLSAVFGANDGWETTFSTEQRATFAAQFDECVRGKL---ATDLDDELHR---- 367
Query: 239 KYSGDVNYFICTRPGGGPVLLSDDSKALLNPKSGLPK 275
V I T+ G GP D +L++P++GLP+
Sbjct: 368 ----GVARLIFTKVGPGP---QDTKSSLIDPETGLPR 397
>sp|Q558Y6|PKS14_DICDI Probable polyketide synthase 14 OS=Dictyostelium discoideum GN=pks14
PE=3 SV=2
Length = 2998
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 31/54 (57%)
Query: 143 SHRIISYVERWNRSVGSPQVAYTFDAGPNAVLIARNRKIATELLQRLLFFFPPN 196
S+R++ + R+ +S+G P + + + +A L++RN IA L + L+ P N
Sbjct: 2362 SNRVLDSLSRYRKSIGLPSICTNYGSVQSAGLVSRNESIAQLLDGQGLYPLPIN 2415
>sp|A7MMG7|TRPA_CROS8 Tryptophan synthase alpha chain OS=Cronobacter sakazakii (strain
ATCC BAA-894) GN=trpA PE=3 SV=1
Length = 269
Score = 32.0 bits (71), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Query: 190 LFFFPPNSETDL----NSYVLGDKSILRDAGIDGMKDIEALPLPPEINNISAQKYSGDVN 245
+F PPN++ DL SY G +L AG+ G ++ ALPL IN ++ + +
Sbjct: 151 IFICPPNADDDLLRQIASYGRGYTYLLSRAGVTGAENRAALPLNHLINKLTEYHAAPPLQ 210
Query: 246 YFICTRPG 253
F + P
Sbjct: 211 GFGISEPA 218
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.133 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 103,391,799
Number of Sequences: 539616
Number of extensions: 4260624
Number of successful extensions: 10095
Number of sequences better than 100.0: 13
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 10076
Number of HSP's gapped (non-prelim): 13
length of query: 277
length of database: 191,569,459
effective HSP length: 116
effective length of query: 161
effective length of database: 128,974,003
effective search space: 20764814483
effective search space used: 20764814483
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)