Query 023761
Match_columns 277
No_of_seqs 276 out of 2175
Neff 5.1
Searched_HMMs 13730
Date Mon Mar 25 12:21:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023761.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/023761hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1bdoa_ b.84.1.1 (A:) Biotinyl 99.9 2.8E-23 2E-27 157.7 10.1 75 202-276 6-80 (80)
2 d1dcza_ b.84.1.1 (A:) Biotin c 99.8 1.2E-19 8.6E-24 136.2 9.5 69 200-275 8-76 (77)
3 d1iyua_ b.84.1.1 (A:) Lipoyl d 99.7 5.3E-17 3.9E-21 122.0 7.1 68 203-277 4-74 (79)
4 d1ghja_ b.84.1.1 (A:) Lipoyl d 99.6 1.9E-15 1.4E-19 113.6 8.7 63 208-277 15-77 (79)
5 d1qjoa_ b.84.1.1 (A:) Lipoyl d 99.6 1.5E-15 1.1E-19 114.2 7.7 63 208-277 14-76 (80)
6 d1k8ma_ b.84.1.1 (A:) Lipoyl d 99.5 3E-15 2.2E-19 114.5 7.1 62 208-276 18-79 (87)
7 d1laba_ b.84.1.1 (A:) Lipoyl d 99.5 8.1E-16 5.9E-20 116.0 3.6 62 208-276 15-76 (80)
8 d1gjxa_ b.84.1.1 (A:) Lipoyl d 99.5 2.3E-15 1.7E-19 113.4 2.7 64 207-277 14-77 (81)
9 d1y8ob1 b.84.1.1 (B:128-229) L 99.4 1.2E-13 9.1E-18 108.2 8.3 61 208-275 19-80 (102)
10 d1pmra_ b.84.1.1 (A:) Lipoyl d 99.4 3.1E-15 2.2E-19 112.8 -1.4 63 207-276 15-77 (80)
11 d1vf7a_ f.46.1.1 (A:) Multidru 97.7 2.4E-06 1.8E-10 71.2 0.8 65 201-272 16-137 (237)
12 d1onla_ b.84.1.1 (A:) Protein 97.2 0.00027 2E-08 56.0 5.8 40 222-261 42-81 (127)
13 d1hpca_ b.84.1.1 (A:) Protein 97.1 0.00031 2.2E-08 56.0 5.8 41 222-262 43-83 (131)
14 d1dcza_ b.84.1.1 (A:) Biotin c 97.0 0.00028 2E-08 51.2 4.1 32 245-276 9-40 (77)
15 d1iyua_ b.84.1.1 (A:) Lipoyl d 96.5 0.00094 6.9E-08 48.4 3.7 34 201-241 42-75 (79)
16 d1bdoa_ b.84.1.1 (A:) Biotinyl 96.5 0.00095 6.9E-08 48.8 3.6 32 201-239 49-80 (80)
17 d1qjoa_ b.84.1.1 (A:) Lipoyl d 96.4 0.001 7.3E-08 48.4 3.5 34 201-241 44-77 (80)
18 d1k8ma_ b.84.1.1 (A:) Lipoyl d 96.2 0.0023 1.7E-07 47.3 4.4 35 201-242 48-82 (87)
19 d1gpra_ b.84.3.1 (A:) Glucose 96.1 0.0068 5E-07 49.5 7.3 65 201-276 10-113 (158)
20 d1ghja_ b.84.1.1 (A:) Lipoyl d 96.0 0.0024 1.8E-07 46.3 3.6 33 201-240 45-77 (79)
21 d2f3ga_ b.84.3.1 (A:) Glucose- 95.8 0.0053 3.8E-07 49.7 5.4 64 202-276 3-105 (150)
22 d1laba_ b.84.1.1 (A:) Lipoyl d 95.8 0.00088 6.4E-08 48.9 0.5 34 201-241 45-78 (80)
23 d1pmra_ b.84.1.1 (A:) Lipoyl d 95.8 0.0018 1.3E-07 47.3 2.1 34 200-240 45-78 (80)
24 d2gpra_ b.84.3.1 (A:) Glucose 95.5 0.012 8.6E-07 47.8 6.3 65 201-276 8-111 (154)
25 d1gjxa_ b.84.1.1 (A:) Lipoyl d 95.3 0.0018 1.3E-07 47.1 0.7 34 201-241 45-78 (81)
26 d1gpra_ b.84.3.1 (A:) Glucose 94.5 0.018 1.3E-06 46.8 4.7 74 201-276 47-158 (158)
27 d2gpra_ b.84.3.1 (A:) Glucose 94.5 0.015 1.1E-06 47.2 4.1 53 221-276 93-154 (154)
28 d2f3ga_ b.84.3.1 (A:) Glucose- 93.7 0.039 2.9E-06 44.4 5.3 75 201-276 39-149 (150)
29 d1y8ob1 b.84.1.1 (B:128-229) L 93.4 0.025 1.8E-06 42.7 3.3 26 251-276 18-43 (102)
30 d1brwa3 d.41.3.1 (A:331-433) P 85.6 0.53 3.8E-05 34.9 5.0 20 257-276 49-68 (103)
31 d1e2wa2 b.84.2.2 (A:169-232) C 82.8 0.44 3.2E-05 32.7 3.1 57 204-273 4-61 (64)
32 d1brwa3 d.41.3.1 (A:331-433) P 81.5 0.59 4.3E-05 34.7 3.7 21 221-241 50-70 (103)
33 d1uoua3 d.41.3.1 (A:374-480) T 81.3 1 7.6E-05 33.5 5.1 20 257-276 47-66 (105)
34 d2tpta3 d.41.3.1 (A:336-440) T 77.8 0.7 5.1E-05 34.3 3.0 19 258-276 50-68 (105)
35 d1e2wa2 b.84.2.2 (A:169-232) C 77.7 0.45 3.3E-05 32.6 1.7 21 216-236 41-61 (64)
36 d1uoua3 d.41.3.1 (A:374-480) T 76.9 1 7.4E-05 33.5 3.7 20 221-240 48-67 (105)
37 d1ci3m2 b.84.2.2 (M:170-231) C 76.4 0.47 3.4E-05 32.1 1.5 21 216-236 39-59 (62)
38 d2tpta3 d.41.3.1 (A:336-440) T 75.3 0.39 2.8E-05 35.8 0.9 20 221-240 50-69 (105)
39 d1qpoa2 d.41.2.1 (A:2-116) Qui 73.6 0.79 5.8E-05 34.4 2.3 20 221-240 75-94 (115)
40 d1hcza2 b.84.2.2 (A:168-230) C 71.0 0.79 5.8E-05 31.6 1.6 26 210-235 35-60 (63)
41 d1o4ua2 d.41.2.1 (A:1-103) Qui 70.8 1.1 7.7E-05 32.7 2.4 20 221-240 63-82 (103)
42 d1qapa2 d.41.2.1 (A:8-129) Qui 70.0 1.2 8.4E-05 33.7 2.6 20 221-240 82-101 (122)
43 d1tu2b2 b.84.2.2 (B:170-235) C 68.3 0.96 7E-05 31.4 1.6 32 203-235 30-62 (66)
44 d1vf5c2 b.84.2.2 (C:170-231) C 61.4 0.98 7.2E-05 31.0 0.5 34 201-235 28-62 (62)
45 d1ci3m2 b.84.2.2 (M:170-231) C 48.1 1.9 0.00014 28.8 0.1 56 203-273 3-59 (62)
46 d1qwya_ b.84.3.2 (A:) Peptidog 46.8 4.2 0.0003 34.8 2.2 19 221-239 220-238 (270)
47 d1qpoa2 d.41.2.1 (A:2-116) Qui 46.6 8.2 0.0006 28.4 3.7 25 252-276 69-93 (115)
48 d1qapa2 d.41.2.1 (A:8-129) Qui 40.9 7.4 0.00054 28.9 2.6 22 255-276 79-100 (122)
49 d2vv5a1 b.38.1.3 (A:113-179) M 37.6 19 0.0014 23.7 4.1 35 222-256 17-51 (67)
50 d1o4ua2 d.41.2.1 (A:1-103) Qui 36.1 6.7 0.00049 28.1 1.6 22 255-276 60-81 (103)
51 d1vf7a_ f.46.1.1 (A:) Multidru 26.6 35 0.0026 26.1 4.7 28 201-235 110-137 (237)
52 d1qwya_ b.84.3.2 (A:) Peptidog 22.1 34 0.0025 28.8 3.9 21 255-275 217-237 (270)
No 1
>d1bdoa_ b.84.1.1 (A:) Biotinyl domain of acetyl-CoA carboxylase {Escherichia coli [TaxId: 562]}
Probab=99.89 E-value=2.8e-23 Score=157.75 Aligned_cols=75 Identities=53% Similarity=0.994 Sum_probs=73.8
Q ss_pred CccCCccEEEEecCCCCCCCcccCCCEEecCCeEEEEEccceeeEEecCCCeEEEEEecCCCCccCCCCeEEEEc
Q 023761 202 PLKCPMAGTFYRSPAPGEPPFVKVGDRVQKGQVLCIIEAMKLMNEIEADRSGTIVEIIAEDRKPVSVDTPLFVIE 276 (277)
Q Consensus 202 ~I~APm~G~~~~sp~p~~~~~VkvGd~V~kGqvL~~IEamK~~~eI~Ap~sG~V~~IlVe~Gd~V~~GqpL~~Ie 276 (277)
.|+|||+|+||++|+|+.++||++||+|++||+||+||+||++++|+||++|+|.+|++++||.|++||+||.|+
T Consensus 6 ~I~aPm~G~~~~~~~p~~~~~V~~Gd~V~~Gq~l~~iEamKm~~~i~a~~~G~v~~i~v~~G~~V~~G~~L~~ie 80 (80)
T d1bdoa_ 6 IVRSPMVGTFYRTPSPDAKAFIEVGQKVNVGDTLCIVEAMKMMNQIEADKSGTVKAILVESGQPVEFDEPLVVIE 80 (80)
T ss_dssp EEECSSSEEEESSSSTTSCCSCCTTCEECTTCEEEEEEETTEEEEEECSSCEEEEEECSCTTCEECTTCEEEEEC
T ss_pred EEeCCCcEEEEecCCCCCCeEccCCCeEeCCCEEEEEEcCcccEEEEcCCCeEEEEEEeCCCCEECCCCEEEEEC
Confidence 699999999999999999999999999999999999999999999999999999999999999999999999986
No 2
>d1dcza_ b.84.1.1 (A:) Biotin carboxyl carrier domain of transcarboxylase (TC 1.3S) {Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]}
Probab=99.79 E-value=1.2e-19 Score=136.15 Aligned_cols=69 Identities=33% Similarity=0.540 Sum_probs=67.1
Q ss_pred CCCccCCccEEEEecCCCCCCCcccCCCEEecCCeEEEEEccceeeEEecCCCeEEEEEecCCCCccCCCCeEEEE
Q 023761 200 LPPLKCPMAGTFYRSPAPGEPPFVKVGDRVQKGQVLCIIEAMKLMNEIEADRSGTIVEIIAEDRKPVSVDTPLFVI 275 (277)
Q Consensus 200 ~~~I~APm~G~~~~sp~p~~~~~VkvGd~V~kGqvL~~IEamK~~~eI~Ap~sG~V~~IlVe~Gd~V~~GqpL~~I 275 (277)
...|+|||+|++++ |+|++||+|++||+||+||+||+.++|+||++|+|.+|++++||.|++|++|++|
T Consensus 8 ~~~v~ap~~G~v~~-------~~V~~Gd~V~~G~~l~~vE~~K~~~~i~ap~~G~V~~i~v~~G~~V~~G~~L~~i 76 (77)
T d1dcza_ 8 EGEIPAPLAGTVSK-------ILVKEGDTVKAGQTVLVLEAMKMETEINAPTDGKVEKVLVKERDAVQGGQGLIKI 76 (77)
T ss_dssp SSEEEBSSSCEEEE-------ECCCTTCEECTTSEEEEEEETTEEEEEECSSSEEEEEECCCTTCBCCBTSEEEEE
T ss_pred CCEEECCCCcEEEE-------EEcCCCCEEeCCCeEEEEEccCccEEEEeCCCEEEEEEeeCCCCEECCCCEEEEe
Confidence 34799999999999 9999999999999999999999999999999999999999999999999999997
No 3
>d1iyua_ b.84.1.1 (A:) Lipoyl domain of dihydrolipoamide acetyltransferase {Azotobacter vinelandii [TaxId: 354]}
Probab=99.66 E-value=5.3e-17 Score=122.01 Aligned_cols=68 Identities=21% Similarity=0.381 Sum_probs=64.2
Q ss_pred ccCC---ccEEEEecCCCCCCCcccCCCEEecCCeEEEEEccceeeEEecCCCeEEEEEecCCCCccCCCCeEEEEcC
Q 023761 203 LKCP---MAGTFYRSPAPGEPPFVKVGDRVQKGQVLCIIEAMKLMNEIEADRSGTIVEIIAEDRKPVSVDTPLFVIEP 277 (277)
Q Consensus 203 I~AP---m~G~~~~sp~p~~~~~VkvGd~V~kGqvL~~IEamK~~~eI~Ap~sG~V~~IlVe~Gd~V~~GqpL~~Iep 277 (277)
|+.| +.|++.+ |+|++||.|++||+||+||+||+.++|+|+++|+|.+++++.||.|..|++|+.|++
T Consensus 4 i~~P~~g~~g~i~~-------~~v~~Gd~V~~gd~l~~iE~~K~~~~i~a~~~G~v~~i~v~~G~~V~~G~~l~~ie~ 74 (79)
T d1iyua_ 4 IRVPDIGGDGEVIE-------LLVKTGDLIEVEQGLVVLESAKASMEVPSPKAGVVKSVSVKLGDKLKEGDAIIELEP 74 (79)
T ss_dssp EECCCCSSEEEEEE-------ECCCTTCBCCSSSEEEEEECSSCEEEEECSSSSEEEEESCCTTCEEETTSEEEEEEC
T ss_pred EECCCCCCCEEEEE-------EEecCCCEEecCceEEEEEecCcEEEEEeccccEEEEEeeCCCCEECCCCEEEEEec
Confidence 4445 6789999 999999999999999999999999999999999999999999999999999999985
No 4
>d1ghja_ b.84.1.1 (A:) Lipoyl domain of the 2-oxoglutarate dehydrogenase complex {Azotobacter vinelandii [TaxId: 354]}
Probab=99.58 E-value=1.9e-15 Score=113.63 Aligned_cols=63 Identities=25% Similarity=0.319 Sum_probs=61.0
Q ss_pred cEEEEecCCCCCCCcccCCCEEecCCeEEEEEccceeeEEecCCCeEEEEEecCCCCccCCCCeEEEEcC
Q 023761 208 AGTFYRSPAPGEPPFVKVGDRVQKGQVLCIIEAMKLMNEIEADRSGTIVEIIAEDRKPVSVDTPLFVIEP 277 (277)
Q Consensus 208 ~G~~~~sp~p~~~~~VkvGd~V~kGqvL~~IEamK~~~eI~Ap~sG~V~~IlVe~Gd~V~~GqpL~~Iep 277 (277)
.|++.+ |+|++||.|++||+||+||+||+.++|+||++|+|.++++++||.|..|++|+.|+.
T Consensus 15 eg~i~~-------w~v~~Gd~V~~gd~l~~vEt~K~~~ei~a~~~G~v~~i~v~~Gd~v~~G~~l~~i~~ 77 (79)
T d1ghja_ 15 DGTVAT-------WHKKPGEAVKRDELIVDIETDKVVMEVLAEADGVIAEIVKNEGDTVLSGELLGKLTE 77 (79)
T ss_dssp CEEECC-------CSSCTTSEECSSCEEEEEECSSCEEEEECSSCEEEEEESSCTTCEECTTCEEEEECC
T ss_pred EEEEEE-------EEcCCCCEEeeCccEEEEEcCceEEEEEeceeEEEEEEEcCCCCEECCCCEEEEEeC
Confidence 599999 999999999999999999999999999999999999999999999999999999863
No 5
>d1qjoa_ b.84.1.1 (A:) Lipoyl domain of dihydrolipoamide acetyltransferase {Escherichia coli [TaxId: 562]}
Probab=99.58 E-value=1.5e-15 Score=114.17 Aligned_cols=63 Identities=25% Similarity=0.297 Sum_probs=60.3
Q ss_pred cEEEEecCCCCCCCcccCCCEEecCCeEEEEEccceeeEEecCCCeEEEEEecCCCCccCCCCeEEEEcC
Q 023761 208 AGTFYRSPAPGEPPFVKVGDRVQKGQVLCIIEAMKLMNEIEADRSGTIVEIIAEDRKPVSVDTPLFVIEP 277 (277)
Q Consensus 208 ~G~~~~sp~p~~~~~VkvGd~V~kGqvL~~IEamK~~~eI~Ap~sG~V~~IlVe~Gd~V~~GqpL~~Iep 277 (277)
.|++.+ |++++||.|++||+||+||+||+.++|.||++|+|.+++++.||.|..|++|+.|+.
T Consensus 14 ~~~v~~-------~~v~~Gd~V~~g~~l~~iEt~K~~~~v~a~~~G~v~~i~v~~G~~V~~G~~l~~ie~ 76 (80)
T d1qjoa_ 14 EVEVTE-------VMVKVGDKVAAEQSLITVEGDKASMEVPAPFAGVVKELKVNVGDKVKTGSLIMIFEV 76 (80)
T ss_dssp CEEEEE-------CCCCTTCEECBTSEEEEEESSSSCEEEEBSSCEEEEECCCCTTCEECTTCCCEEEES
T ss_pred eEEEEE-------EEeCCCCEECCCCEEEEEEcCcccceEeCCeeEEEEEEEeCCCCEECCCCEEEEEec
Confidence 358999 999999999999999999999999999999999999999999999999999999863
No 6
>d1k8ma_ b.84.1.1 (A:) Lipoyl domain of the mitochondrial branched-chain alpha-ketoacid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.55 E-value=3e-15 Score=114.54 Aligned_cols=62 Identities=26% Similarity=0.282 Sum_probs=60.6
Q ss_pred cEEEEecCCCCCCCcccCCCEEecCCeEEEEEccceeeEEecCCCeEEEEEecCCCCccCCCCeEEEEc
Q 023761 208 AGTFYRSPAPGEPPFVKVGDRVQKGQVLCIIEAMKLMNEIEADRSGTIVEIIAEDRKPVSVDTPLFVIE 276 (277)
Q Consensus 208 ~G~~~~sp~p~~~~~VkvGd~V~kGqvL~~IEamK~~~eI~Ap~sG~V~~IlVe~Gd~V~~GqpL~~Ie 276 (277)
-|++.. |++++||.|++||+||+||+||+.++|+||++|+|.+++++.|+.|..|++|+.|+
T Consensus 18 eg~i~~-------w~v~~Gd~V~~g~~l~~vEt~K~~~~v~A~~~G~I~~i~v~~G~~v~~G~~l~~i~ 79 (87)
T d1k8ma_ 18 EVTVKE-------WYVKEGDTVSQFDSICEVQSDKASVTITSRYDGVIKKLYYNLDDIAYVGKPLVDIE 79 (87)
T ss_dssp CEEEEE-------ECCCTTCEECSSSCCEEEECSSCEEECCCSSCEEEEEECCCSSCEECTTSEEEEEE
T ss_pred eEEEEE-------EEcCCCCEEecCCEEEEEEccCceEEEEeCCCEEEEEEEeCCCCEECCCCEEEEEE
Confidence 599999 99999999999999999999999999999999999999999999999999999986
No 7
>d1laba_ b.84.1.1 (A:) Lipoyl domain of dihydrolipoamide acetyltransferase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=99.55 E-value=8.1e-16 Score=116.00 Aligned_cols=62 Identities=29% Similarity=0.516 Sum_probs=60.4
Q ss_pred cEEEEecCCCCCCCcccCCCEEecCCeEEEEEccceeeEEecCCCeEEEEEecCCCCccCCCCeEEEEc
Q 023761 208 AGTFYRSPAPGEPPFVKVGDRVQKGQVLCIIEAMKLMNEIEADRSGTIVEIIAEDRKPVSVDTPLFVIE 276 (277)
Q Consensus 208 ~G~~~~sp~p~~~~~VkvGd~V~kGqvL~~IEamK~~~eI~Ap~sG~V~~IlVe~Gd~V~~GqpL~~Ie 276 (277)
-|++.+ |+|++||.|++||+||+||+||+.++|.||.+|+|.+++++.||.|..|++|+.|+
T Consensus 15 eg~i~~-------w~v~~Gd~V~~gd~l~~vEt~K~~~ei~A~~~G~v~~i~v~~Gd~v~~G~~l~~ie 76 (80)
T d1laba_ 15 EGEIVK-------WFVKPGDEVNEDDVLCEVQNDKAVVEIPSPVKGKVLEILVPEGTVATVGQTLITLD 76 (80)
T ss_dssp SEEEEE-------CCCSSCCEECSSCCCEEEECSSCEEEECCSSCEECCCBSSCSSSEECSSSCSBCBB
T ss_pred eEEEEE-------EEeCCCCEEeeCcCEEEEEcccEEEEEEcCCCEEEEEEEeCCCCEECCCCEEEEEe
Confidence 599999 99999999999999999999999999999999999999999999999999999885
No 8
>d1gjxa_ b.84.1.1 (A:) Lipoyl domain of dihydrolipoamide acetyltransferase {Neisseria meningitidis [TaxId: 487]}
Probab=99.50 E-value=2.3e-15 Score=113.39 Aligned_cols=64 Identities=20% Similarity=0.250 Sum_probs=60.9
Q ss_pred ccEEEEecCCCCCCCcccCCCEEecCCeEEEEEccceeeEEecCCCeEEEEEecCCCCccCCCCeEEEEcC
Q 023761 207 MAGTFYRSPAPGEPPFVKVGDRVQKGQVLCIIEAMKLMNEIEADRSGTIVEIIAEDRKPVSVDTPLFVIEP 277 (277)
Q Consensus 207 m~G~~~~sp~p~~~~~VkvGd~V~kGqvL~~IEamK~~~eI~Ap~sG~V~~IlVe~Gd~V~~GqpL~~Iep 277 (277)
..|++.+ |+|++||.|++||+||+||+||+.++|+||.+|+|.++++++|+.|..|++|+.|++
T Consensus 14 ~~~~v~~-------w~v~~Gd~V~~gd~l~~iEt~K~~~~i~a~~~G~i~~i~v~~G~~v~~G~~l~~ie~ 77 (81)
T d1gjxa_ 14 ENVDIIA-------VEVNVGDTIAVDDTLITLETDKATMDVPAEVAGVVKEVKVKVGDKISEGGLIVVVEA 77 (81)
T ss_dssp SSEEEEE-------ECCCSSCBCCSSCCCEEEECSSCEEEECCCCSSBBCCCCCCSSCEECSSSCCCEECC
T ss_pred cEEEEEE-------EEeCCCCEECCCCEEEEEEcCCcEEEEEeeeeEEEEEEEeCCCCEECCCCEEEEEec
Confidence 3478888 999999999999999999999999999999999999999999999999999999974
No 9
>d1y8ob1 b.84.1.1 (B:128-229) Lipoyl domain of dihydrolipoamide acetyltransferase {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.43 E-value=1.2e-13 Score=108.23 Aligned_cols=61 Identities=31% Similarity=0.468 Sum_probs=59.1
Q ss_pred cEEEEecCCCCCCCcccCCCEEecCCeEEEEEccceeeEEecCCCeEEEEEecCCCC-ccCCCCeEEEE
Q 023761 208 AGTFYRSPAPGEPPFVKVGDRVQKGQVLCIIEAMKLMNEIEADRSGTIVEIIAEDRK-PVSVDTPLFVI 275 (277)
Q Consensus 208 ~G~~~~sp~p~~~~~VkvGd~V~kGqvL~~IEamK~~~eI~Ap~sG~V~~IlVe~Gd-~V~~GqpL~~I 275 (277)
-|++.+ |+|++||.|++||+||.||++|+.++|.|+++|+|.++++++|+ .|..|++|+.|
T Consensus 19 eg~i~~-------w~v~~Gd~V~~gd~l~~vETdK~~~ei~a~~~G~l~~i~v~eGd~~v~vG~~ia~i 80 (102)
T d1y8ob1 19 MGTVQR-------WEKKVGEKLSEGDLLAEIETDKATIGFEVQEEGYLAKILVPEGTRDVPLGTPLCII 80 (102)
T ss_dssp EEEEEE-------ECSCTTCEECTTCEEEEEECSSCEEEEECCSCEEEEEESSCTTCCSEETTCEEEEE
T ss_pred EEEEEE-------EEeCCCCEEecCccEEEEEcCcEEEEEecCCcEEEEEEEEccCCEEEcCCCEEEEE
Confidence 599999 99999999999999999999999999999999999999999997 69999999988
No 10
>d1pmra_ b.84.1.1 (A:) Lipoyl domain of the 2-oxoglutarate dehydrogenase complex {Escherichia coli [TaxId: 562]}
Probab=99.43 E-value=3.1e-15 Score=112.83 Aligned_cols=63 Identities=24% Similarity=0.273 Sum_probs=60.6
Q ss_pred ccEEEEecCCCCCCCcccCCCEEecCCeEEEEEccceeeEEecCCCeEEEEEecCCCCccCCCCeEEEEc
Q 023761 207 MAGTFYRSPAPGEPPFVKVGDRVQKGQVLCIIEAMKLMNEIEADRSGTIVEIIAEDRKPVSVDTPLFVIE 276 (277)
Q Consensus 207 m~G~~~~sp~p~~~~~VkvGd~V~kGqvL~~IEamK~~~eI~Ap~sG~V~~IlVe~Gd~V~~GqpL~~Ie 276 (277)
..|++.+ |+|++||.|++||.||.||+||+.++|.||++|+|.+++++.||.|..|++|++|+
T Consensus 15 ~eg~i~~-------w~v~~Gd~V~~gd~l~~vEtdK~~~ev~a~~~G~l~~i~v~~Gd~v~~G~~l~~i~ 77 (80)
T d1pmra_ 15 ADATVAT-------WHKKPGDAVVRDEVLVEIETDKVVLEVPASADGILDAVLEDEGTTVTSRQILGRLR 77 (80)
T ss_dssp SCEECCB-------CCCCTTCCBSSSCCBCBCCSSSCCCCCBCCSBCCCCBCTTCTTCEECSSSEEEBCC
T ss_pred cEEEEEE-------EEeCCCCEEcCCCEEEEEEcCceEEEEeccCCEEEEEEEeCCCCEECCCCEEEEEe
Confidence 3589999 99999999999999999999999999999999999999999999999999999886
No 11
>d1vf7a_ f.46.1.1 (A:) Multidrug resistance protein MexA domain {Pseudomonas aeruginosa [TaxId: 287]}
Probab=97.75 E-value=2.4e-06 Score=71.25 Aligned_cols=65 Identities=18% Similarity=0.246 Sum_probs=56.0
Q ss_pred CCccCCccEEEEecCCCCCCCcccCCCEEecCCeEEEEEccce-------------------------------------
Q 023761 201 PPLKCPMAGTFYRSPAPGEPPFVKVGDRVQKGQVLCIIEAMKL------------------------------------- 243 (277)
Q Consensus 201 ~~I~APm~G~~~~sp~p~~~~~VkvGd~V~kGqvL~~IEamK~------------------------------------- 243 (277)
..|.+++.|++.. ++|++||.|++||+|+.|+...+
T Consensus 16 ~~V~s~v~G~V~~-------v~V~~G~~VkkGq~L~~ld~~~~~~~l~~a~a~~~~a~~~~~r~~~l~~~~~~~~~~~~~ 88 (237)
T d1vf7a_ 16 AEVRPQVNGIILK-------RLFKEGSDVKAGQQLYQIDPATYEADYQSAQANLASTQEQAQRYKLLVADQAVSKQQYAD 88 (237)
T ss_dssp EEECCSSCEEEEE-------CCSCSSEEECTTSEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHH
T ss_pred EEEEeecCEEEEE-------EECCCcCEECCCCEEEEEehHHHHhhhhhhhhhhhhhhhhhhhhhhhhhccccccchhhh
Confidence 3699999999999 99999999999999999975322
Q ss_pred --------------------eeEEecCCCeEEEEEecCCCCccCCCCeE
Q 023761 244 --------------------MNEIEADRSGTIVEIIAEDRKPVSVDTPL 272 (277)
Q Consensus 244 --------------------~~eI~Ap~sG~V~~IlVe~Gd~V~~GqpL 272 (277)
...|.||++|+|..+.++.|+.+..|..+
T Consensus 89 ~~~~~~~a~~~l~~a~~~l~~~~i~ap~~G~v~~~~~~~g~~~~~~~~~ 137 (237)
T d1vf7a_ 89 ANAAYLQSKAAVEQARINLRYTKVLSPISGRIGRSAVTEGALVTNGQAN 137 (237)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTEEECSSSEEECCCSSCBTCEECTTCSS
T ss_pred hhhhcchhHHHHHHHhhhhcccccccchhceeeeEEeccCcEEcCCcce
Confidence 33466999999999999999999888644
No 12
>d1onla_ b.84.1.1 (A:) Protein H of glycine cleavage system {Thermus thermophilus [TaxId: 274]}
Probab=97.16 E-value=0.00027 Score=55.99 Aligned_cols=40 Identities=33% Similarity=0.535 Sum_probs=37.4
Q ss_pred cccCCCEEecCCeEEEEEccceeeEEecCCCeEEEEEecC
Q 023761 222 FVKVGDRVQKGQVLCIIEAMKLMNEIEADRSGTIVEIIAE 261 (277)
Q Consensus 222 ~VkvGd~V~kGqvL~~IEamK~~~eI~Ap~sG~V~~IlVe 261 (277)
+.++|+.|++|+.++.||+.|...+|.+|++|+|++++-+
T Consensus 42 lp~~g~~v~~g~~~~~iEs~k~~~~i~sPvsG~Vv~vN~~ 81 (127)
T d1onla_ 42 LPEVGRVVEKGEAVAVVESVKTASDIYAPVAGEIVEVNLA 81 (127)
T ss_dssp CBCTTCEECTTCEEEEEEESSBEEEEECSSSEEEEEECTH
T ss_pred CCCCCchhcCCCceEEEeeccceeeccCCccceEEEEhhh
Confidence 4589999999999999999999999999999999999854
No 13
>d1hpca_ b.84.1.1 (A:) Protein H of glycine cleavage system {Pea (Pisum sativum) [TaxId: 3888]}
Probab=97.12 E-value=0.00031 Score=55.98 Aligned_cols=41 Identities=22% Similarity=0.365 Sum_probs=37.6
Q ss_pred cccCCCEEecCCeEEEEEccceeeEEecCCCeEEEEEecCC
Q 023761 222 FVKVGDRVQKGQVLCIIEAMKLMNEIEADRSGTIVEIIAED 262 (277)
Q Consensus 222 ~VkvGd~V~kGqvL~~IEamK~~~eI~Ap~sG~V~~IlVe~ 262 (277)
+-++|+.|++|+.+|.||+.|...+|.+|++|+|++++-+.
T Consensus 43 lp~~g~~v~~g~~~~~iEs~k~~~~i~sPv~G~vv~vN~~l 83 (131)
T d1hpca_ 43 LPEPGVSVTKGKGFGAVESVKATSDVNSPISGEVIEVNTGL 83 (131)
T ss_dssp CCCTTCEECBTSEEEEEEESSCEEEEEBSSCEEEEEECTHH
T ss_pred CCCCCccccCCCceEEEEeecccccccCCcchhheeehhhh
Confidence 35899999999999999999999999999999999997543
No 14
>d1dcza_ b.84.1.1 (A:) Biotin carboxyl carrier domain of transcarboxylase (TC 1.3S) {Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]}
Probab=97.00 E-value=0.00028 Score=51.15 Aligned_cols=32 Identities=28% Similarity=0.504 Sum_probs=30.4
Q ss_pred eEEecCCCeEEEEEecCCCCccCCCCeEEEEc
Q 023761 245 NEIEADRSGTIVEIIAEDRKPVSVDTPLFVIE 276 (277)
Q Consensus 245 ~eI~Ap~sG~V~~IlVe~Gd~V~~GqpL~~Ie 276 (277)
..|+||..|+|.+|++++||.|..||+|+.|+
T Consensus 9 ~~v~ap~~G~v~~~~V~~Gd~V~~G~~l~~vE 40 (77)
T d1dcza_ 9 GEIPAPLAGTVSKILVKEGDTVKAGQTVLVLE 40 (77)
T ss_dssp SEEEBSSSCEEEEECCCTTCEECTTSEEEEEE
T ss_pred CEEECCCCcEEEEEEcCCCCEEeCCCeEEEEE
Confidence 47999999999999999999999999999986
No 15
>d1iyua_ b.84.1.1 (A:) Lipoyl domain of dihydrolipoamide acetyltransferase {Azotobacter vinelandii [TaxId: 354]}
Probab=96.48 E-value=0.00094 Score=48.42 Aligned_cols=34 Identities=26% Similarity=0.455 Sum_probs=31.8
Q ss_pred CCccCCccEEEEecCCCCCCCcccCCCEEecCCeEEEEEcc
Q 023761 201 PPLKCPMAGTFYRSPAPGEPPFVKVGDRVQKGQVLCIIEAM 241 (277)
Q Consensus 201 ~~I~APm~G~~~~sp~p~~~~~VkvGd~V~kGqvL~~IEam 241 (277)
..|+||..|++.+ +++++||.|..||+||.||..
T Consensus 42 ~~i~a~~~G~v~~-------i~v~~G~~V~~G~~l~~ie~~ 75 (79)
T d1iyua_ 42 MEVPSPKAGVVKS-------VSVKLGDKLKEGDAIIELEPA 75 (79)
T ss_dssp EEEECSSSSEEEE-------ESCCTTCEEETTSEEEEEECC
T ss_pred EEEEeccccEEEE-------EeeCCCCEECCCCEEEEEecC
Confidence 4799999999999 999999999999999999864
No 16
>d1bdoa_ b.84.1.1 (A:) Biotinyl domain of acetyl-CoA carboxylase {Escherichia coli [TaxId: 562]}
Probab=96.47 E-value=0.00095 Score=48.81 Aligned_cols=32 Identities=25% Similarity=0.366 Sum_probs=30.5
Q ss_pred CCccCCccEEEEecCCCCCCCcccCCCEEecCCeEEEEE
Q 023761 201 PPLKCPMAGTFYRSPAPGEPPFVKVGDRVQKGQVLCIIE 239 (277)
Q Consensus 201 ~~I~APm~G~~~~sp~p~~~~~VkvGd~V~kGqvL~~IE 239 (277)
..|+||..|++.+ ++|+.||.|..||+|+.||
T Consensus 49 ~~i~a~~~G~v~~-------i~v~~G~~V~~G~~L~~ie 80 (80)
T d1bdoa_ 49 NQIEADKSGTVKA-------ILVESGQPVEFDEPLVVIE 80 (80)
T ss_dssp EEEECSSCEEEEE-------ECSCTTCEECTTCEEEEEC
T ss_pred EEEEcCCCeEEEE-------EEeCCCCEECCCCEEEEEC
Confidence 4799999999999 9999999999999999987
No 17
>d1qjoa_ b.84.1.1 (A:) Lipoyl domain of dihydrolipoamide acetyltransferase {Escherichia coli [TaxId: 562]}
Probab=96.42 E-value=0.001 Score=48.39 Aligned_cols=34 Identities=32% Similarity=0.526 Sum_probs=31.7
Q ss_pred CCccCCccEEEEecCCCCCCCcccCCCEEecCCeEEEEEcc
Q 023761 201 PPLKCPMAGTFYRSPAPGEPPFVKVGDRVQKGQVLCIIEAM 241 (277)
Q Consensus 201 ~~I~APm~G~~~~sp~p~~~~~VkvGd~V~kGqvL~~IEam 241 (277)
..|.||..|++.+ +++++||.|+.||+||.||..
T Consensus 44 ~~v~a~~~G~v~~-------i~v~~G~~V~~G~~l~~ie~e 77 (80)
T d1qjoa_ 44 MEVPAPFAGVVKE-------LKVNVGDKVKTGSLIMIFEVE 77 (80)
T ss_dssp EEEEBSSCEEEEE-------CCCCTTCEECTTCCCEEEESC
T ss_pred ceEeCCeeEEEEE-------EEeCCCCEECCCCEEEEEecC
Confidence 4799999999999 999999999999999999864
No 18
>d1k8ma_ b.84.1.1 (A:) Lipoyl domain of the mitochondrial branched-chain alpha-ketoacid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.17 E-value=0.0023 Score=47.31 Aligned_cols=35 Identities=17% Similarity=0.228 Sum_probs=32.5
Q ss_pred CCccCCccEEEEecCCCCCCCcccCCCEEecCCeEEEEEccc
Q 023761 201 PPLKCPMAGTFYRSPAPGEPPFVKVGDRVQKGQVLCIIEAMK 242 (277)
Q Consensus 201 ~~I~APm~G~~~~sp~p~~~~~VkvGd~V~kGqvL~~IEamK 242 (277)
..|.||..|++.+ +++++||.|+.|++||.|+...
T Consensus 48 ~~v~A~~~G~I~~-------i~v~~G~~v~~G~~l~~i~~~~ 82 (87)
T d1k8ma_ 48 VTITSRYDGVIKK-------LYYNLDDIAYVGKPLVDIETEA 82 (87)
T ss_dssp EECCCSSCEEEEE-------ECCCSSCEECTTSEEEEEECSC
T ss_pred EEEEeCCCEEEEE-------EEeCCCCEECCCCEEEEEEcCC
Confidence 4799999999999 9999999999999999998754
No 19
>d1gpra_ b.84.3.1 (A:) Glucose permease IIa domain, IIa-glc {Bacillus subtilis [TaxId: 1423]}
Probab=96.08 E-value=0.0068 Score=49.45 Aligned_cols=65 Identities=17% Similarity=0.295 Sum_probs=51.8
Q ss_pred CCccCCccEEEEecCCCCCCCcccCCCEE----ecCCeEEEEEccceeeEEecCCCeEEE--------------------
Q 023761 201 PPLKCPMAGTFYRSPAPGEPPFVKVGDRV----QKGQVLCIIEAMKLMNEIEADRSGTIV-------------------- 256 (277)
Q Consensus 201 ~~I~APm~G~~~~sp~p~~~~~VkvGd~V----~kGqvL~~IEamK~~~eI~Ap~sG~V~-------------------- 256 (277)
..|.||+.|++.. +-++.|.| --|+-++++-.. ..|.||++|+|.
T Consensus 10 ~~i~aP~~G~vi~--------L~~V~D~vFs~~~~G~G~aI~P~~---~~v~AP~~G~I~~i~~T~HAigi~t~~G~evL 78 (158)
T d1gpra_ 10 EVFVSPITGEIHP--------ITDVPDQVFSGKMMGDGFAILPSE---GIVVSPVRGKILNVFPTKHAIGLQSDGGREIL 78 (158)
T ss_dssp BCCBCSSSEEEEE--------GGGSSSHHHHTTSSCEEEEEEESS---CEEECSSSEEEEEECTTSSEEEEEETTSCEEE
T ss_pred EEEEecCCcEEEE--------hhhCCChHhccCCccceEEEEEcC---CEEEEeeCeEEEEEcCCCCEEEEEeCCCeEEE
Confidence 3699999999987 55666665 237777776544 468999999887
Q ss_pred ---------------EEecCCCCccCCCCeEEEEc
Q 023761 257 ---------------EIIAEDRKPVSVDTPLFVIE 276 (277)
Q Consensus 257 ---------------~IlVe~Gd~V~~GqpL~~Ie 276 (277)
+++++.||.|..||+|+++.
T Consensus 79 iHiGiDTV~L~G~gF~~~v~~Gd~Vk~G~~L~~~D 113 (158)
T d1gpra_ 79 IHFGIDTVSLKGEGFTSFVSEGDRVEPGQKLLEVD 113 (158)
T ss_dssp EECSBSCGGGTTTTEEECCCTTCEECTTCEEEEEC
T ss_pred EEEeecccccCCcceEEEEcCCCEEcCCCEEEEeC
Confidence 78899999999999999873
No 20
>d1ghja_ b.84.1.1 (A:) Lipoyl domain of the 2-oxoglutarate dehydrogenase complex {Azotobacter vinelandii [TaxId: 354]}
Probab=95.98 E-value=0.0024 Score=46.29 Aligned_cols=33 Identities=18% Similarity=0.224 Sum_probs=31.0
Q ss_pred CCccCCccEEEEecCCCCCCCcccCCCEEecCCeEEEEEc
Q 023761 201 PPLKCPMAGTFYRSPAPGEPPFVKVGDRVQKGQVLCIIEA 240 (277)
Q Consensus 201 ~~I~APm~G~~~~sp~p~~~~~VkvGd~V~kGqvL~~IEa 240 (277)
..|.||..|++.+ +++++||.|..||+|++|+.
T Consensus 45 ~ei~a~~~G~v~~-------i~v~~Gd~v~~G~~l~~i~~ 77 (79)
T d1ghja_ 45 MEVLAEADGVIAE-------IVKNEGDTVLSGELLGKLTE 77 (79)
T ss_dssp EEEECSSCEEEEE-------ESSCTTCEECTTCEEEEECC
T ss_pred EEEEeceeEEEEE-------EEcCCCCEECCCCEEEEEeC
Confidence 4799999999999 99999999999999999975
No 21
>d2f3ga_ b.84.3.1 (A:) Glucose-specific factor III (glsIII) {Escherichia coli [TaxId: 562]}
Probab=95.83 E-value=0.0053 Score=49.75 Aligned_cols=64 Identities=27% Similarity=0.354 Sum_probs=49.4
Q ss_pred CccCCccEEEEecCCCCCCCcccCCCEEec----CCeEEEEEccceeeEEecCCCeEEE---------------------
Q 023761 202 PLKCPMAGTFYRSPAPGEPPFVKVGDRVQK----GQVLCIIEAMKLMNEIEADRSGTIV--------------------- 256 (277)
Q Consensus 202 ~I~APm~G~~~~sp~p~~~~~VkvGd~V~k----GqvL~~IEamK~~~eI~Ap~sG~V~--------------------- 256 (277)
.|.||+.|++.. +-++-|.|=. |+-++++-.. ..|.||++|+|.
T Consensus 3 ~i~aP~~G~vi~--------L~~v~D~vFs~~~mG~GvAI~P~~---~~v~AP~dG~V~~v~~T~HAigi~t~~G~eiLI 71 (150)
T d2f3ga_ 3 EIIAPLSGEIVN--------IEDVPDVVFAEKIVGDGIAIKPTG---NKMVAPVDGTIGKIFETNHAFSIESDSGVELFV 71 (150)
T ss_dssp EEECSSSEEEEC--------GGGSSCHHHHTTSSCEEEEEEECS---SEEECSSSEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred EEEEecCceEEE--------cccCCChHHhcCCccCeEEEEeCC---CeEEeecCEEEEEECCCCCEEEEEeCCceEEEE
Confidence 588999999987 4456555443 6777776544 468899999887
Q ss_pred --------------EEecCCCCccCCCCeEEEEc
Q 023761 257 --------------EIIAEDRKPVSVDTPLFVIE 276 (277)
Q Consensus 257 --------------~IlVe~Gd~V~~GqpL~~Ie 276 (277)
+.+++.||.|..||+|+++.
T Consensus 72 HiGidTV~L~G~gF~~~v~~Gd~V~~G~~L~~~D 105 (150)
T d2f3ga_ 72 HFGIDTVELKGEGFKRIAEEGQRVKVGDTVIEFD 105 (150)
T ss_dssp ECSBSGGGGTTTTEEECSCTTCEECTTCEEEEEC
T ss_pred EEccchhhcCCcceEEEecCCCEECCCCEEEEEc
Confidence 67888899999999999873
No 22
>d1laba_ b.84.1.1 (A:) Lipoyl domain of dihydrolipoamide acetyltransferase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=95.80 E-value=0.00088 Score=48.91 Aligned_cols=34 Identities=24% Similarity=0.358 Sum_probs=31.7
Q ss_pred CCccCCccEEEEecCCCCCCCcccCCCEEecCCeEEEEEcc
Q 023761 201 PPLKCPMAGTFYRSPAPGEPPFVKVGDRVQKGQVLCIIEAM 241 (277)
Q Consensus 201 ~~I~APm~G~~~~sp~p~~~~~VkvGd~V~kGqvL~~IEam 241 (277)
..|.||..|++.+ +++++||.|+.||+||.||..
T Consensus 45 ~ei~A~~~G~v~~-------i~v~~Gd~v~~G~~l~~ie~~ 78 (80)
T d1laba_ 45 VEIPSPVKGKVLE-------ILVPEGTVATVGQTLITLDAP 78 (80)
T ss_dssp EEECCSSCEECCC-------BSSCSSSEECSSSCSBCBBCS
T ss_pred EEEEcCCCEEEEE-------EEeCCCCEECCCCEEEEEecC
Confidence 4799999999999 999999999999999999864
No 23
>d1pmra_ b.84.1.1 (A:) Lipoyl domain of the 2-oxoglutarate dehydrogenase complex {Escherichia coli [TaxId: 562]}
Probab=95.77 E-value=0.0018 Score=47.27 Aligned_cols=34 Identities=15% Similarity=0.189 Sum_probs=31.4
Q ss_pred CCCccCCccEEEEecCCCCCCCcccCCCEEecCCeEEEEEc
Q 023761 200 LPPLKCPMAGTFYRSPAPGEPPFVKVGDRVQKGQVLCIIEA 240 (277)
Q Consensus 200 ~~~I~APm~G~~~~sp~p~~~~~VkvGd~V~kGqvL~~IEa 240 (277)
...|.||..|++.+ +++++||.|..||+||.|+.
T Consensus 45 ~~ev~a~~~G~l~~-------i~v~~Gd~v~~G~~l~~i~e 78 (80)
T d1pmra_ 45 VLEVPASADGILDA-------VLEDEGTTVTSRQILGRLRE 78 (80)
T ss_dssp CCCCBCCSBCCCCB-------CTTCTTCEECSSSEEEBCCC
T ss_pred EEEEeccCCEEEEE-------EEeCCCCEECCCCEEEEEeC
Confidence 35799999999999 99999999999999999974
No 24
>d2gpra_ b.84.3.1 (A:) Glucose permease IIa domain, IIa-glc {Mycoplasma capricolum [TaxId: 2095]}
Probab=95.48 E-value=0.012 Score=47.81 Aligned_cols=65 Identities=25% Similarity=0.349 Sum_probs=50.5
Q ss_pred CCccCCccEEEEecCCCCCCCcccCCCEE----ecCCeEEEEEccceeeEEecCCCeEEE--------------------
Q 023761 201 PPLKCPMAGTFYRSPAPGEPPFVKVGDRV----QKGQVLCIIEAMKLMNEIEADRSGTIV-------------------- 256 (277)
Q Consensus 201 ~~I~APm~G~~~~sp~p~~~~~VkvGd~V----~kGqvL~~IEamK~~~eI~Ap~sG~V~-------------------- 256 (277)
..|.||+.|++.. .-++-|.| --|+-++++-.. ..|.||++|+|.
T Consensus 8 ~~i~aP~~G~vi~--------l~~v~D~vFs~k~~G~G~aI~P~~---~~v~AP~dG~I~~i~~T~HAigi~t~~G~eiL 76 (154)
T d2gpra_ 8 LKVLAPCDGTIIT--------LDEVEDEVFKERMLGDGFAINPKS---NDFHAPVSGKLVTAFPTKHAFGIQTKSGVEIL 76 (154)
T ss_dssp EEEECSSSEEEEC--------GGGSSCHHHHTTSSCEEEEEEESS---SEEECSSCEEEEECCTTCSEEEEECTTSCEEE
T ss_pred eEEEecCCceEEE--------cccCCChhhccCCCcCeEEEEecC---CEEEEecCeEEEEECCCCcEEEEEeCCCCEEE
Confidence 4699999999987 44555554 246777776543 568899999887
Q ss_pred ---------------EEecCCCCccCCCCeEEEEc
Q 023761 257 ---------------EIIAEDRKPVSVDTPLFVIE 276 (277)
Q Consensus 257 ---------------~IlVe~Gd~V~~GqpL~~Ie 276 (277)
+.+++.||.|..||+|+++.
T Consensus 77 IHiGidTV~L~G~gF~~~v~~Gd~V~~G~~L~~~D 111 (154)
T d2gpra_ 77 LHIGLDTVSLDGNGFESFVTQDQEVNAGDKLVTVD 111 (154)
T ss_dssp EECSSSGGGGTTCSEEECCCTTCEECTTCEEEEEC
T ss_pred EEEcccccccCCceeEEEecCCCEEcCCCEEEEEc
Confidence 68889999999999999873
No 25
>d1gjxa_ b.84.1.1 (A:) Lipoyl domain of dihydrolipoamide acetyltransferase {Neisseria meningitidis [TaxId: 487]}
Probab=95.34 E-value=0.0018 Score=47.11 Aligned_cols=34 Identities=29% Similarity=0.500 Sum_probs=31.4
Q ss_pred CCccCCccEEEEecCCCCCCCcccCCCEEecCCeEEEEEcc
Q 023761 201 PPLKCPMAGTFYRSPAPGEPPFVKVGDRVQKGQVLCIIEAM 241 (277)
Q Consensus 201 ~~I~APm~G~~~~sp~p~~~~~VkvGd~V~kGqvL~~IEam 241 (277)
..|.||..|++.+ +++++||.|..||+||.||..
T Consensus 45 ~~i~a~~~G~i~~-------i~v~~G~~v~~G~~l~~ie~~ 78 (81)
T d1gjxa_ 45 MDVPAEVAGVVKE-------VKVKVGDKISEGGLIVVVEAE 78 (81)
T ss_dssp EEECCCCSSBBCC-------CCCCSSCEECSSSCCCEECCS
T ss_pred EEEEeeeeEEEEE-------EEeCCCCEECCCCEEEEEecc
Confidence 4789999999999 999999999999999999863
No 26
>d1gpra_ b.84.3.1 (A:) Glucose permease IIa domain, IIa-glc {Bacillus subtilis [TaxId: 1423]}
Probab=94.46 E-value=0.018 Score=46.83 Aligned_cols=74 Identities=23% Similarity=0.280 Sum_probs=45.2
Q ss_pred CCccCCccEEEEecCCCCC----------------------------CCcccCCCEEecCCeEEEEEccc-------eee
Q 023761 201 PPLKCPMAGTFYRSPAPGE----------------------------PPFVKVGDRVQKGQVLCIIEAMK-------LMN 245 (277)
Q Consensus 201 ~~I~APm~G~~~~sp~p~~----------------------------~~~VkvGd~V~kGqvL~~IEamK-------~~~ 245 (277)
..|.||..|++..-.+-+. ..+|+.||+|++||.|+.++-.. +..
T Consensus 47 ~~v~AP~~G~I~~i~~T~HAigi~t~~G~evLiHiGiDTV~L~G~gF~~~v~~Gd~Vk~G~~L~~~D~~~i~~~g~~~~t 126 (158)
T d1gpra_ 47 GIVVSPVRGKILNVFPTKHAIGLQSDGGREILIHFGIDTVSLKGEGFTSFVSEGDRVEPGQKLLEVDLDAVKPNVPSLMT 126 (158)
T ss_dssp CEEECSSSEEEEEECTTSSEEEEEETTSCEEEEECSBSCGGGTTTTEEECCCTTCEECTTCEEEEECHHHHGGGSSBCCE
T ss_pred CEEEEeeCeEEEEEcCCCCEEEEEeCCCeEEEEEEeecccccCCcceEEEEcCCCEEcCCCEEEEeCHHHHHhhCCCCce
Confidence 4799999999865332111 28899999999999999986532 222
Q ss_pred EE--ecCCCeEEEEEecC-CCCccCCCCeEEEEc
Q 023761 246 EI--EADRSGTIVEIIAE-DRKPVSVDTPLFVIE 276 (277)
Q Consensus 246 eI--~Ap~sG~V~~IlVe-~Gd~V~~GqpL~~Ie 276 (277)
.| .-..+. ..+... .|+....+++|+.|+
T Consensus 127 ~vvvtn~~~~--~~i~~~~~~~v~~g~~~i~~v~ 158 (158)
T d1gpra_ 127 PIVFTNLAEG--ETVSIKASGSVNREQEDIVKIE 158 (158)
T ss_dssp EEEESSCCTT--CCEEECCCSEECTTCBCCEEEC
T ss_pred EEEEEecccc--ceEEEecCCcEEcCCceEEEEC
Confidence 22 222222 223333 444444456788875
No 27
>d2gpra_ b.84.3.1 (A:) Glucose permease IIa domain, IIa-glc {Mycoplasma capricolum [TaxId: 2095]}
Probab=94.45 E-value=0.015 Score=47.19 Aligned_cols=53 Identities=13% Similarity=0.166 Sum_probs=33.9
Q ss_pred CcccCCCEEecCCeEEEEEccce---------eeEEecCCCeEEEEEecCCCCccCCCCeEEEEc
Q 023761 221 PFVKVGDRVQKGQVLCIIEAMKL---------MNEIEADRSGTIVEIIAEDRKPVSVDTPLFVIE 276 (277)
Q Consensus 221 ~~VkvGd~V~kGqvL~~IEamK~---------~~eI~Ap~sG~V~~IlVe~Gd~V~~GqpL~~Ie 276 (277)
++|++||+|++||.|+.++-..+ ..-+.-..... +.......|..|++|++|+
T Consensus 93 ~~v~~Gd~V~~G~~L~~~D~~~i~~~g~~~~t~vvitn~~~~~---~~~~~~g~V~~Gd~i~~ik 154 (154)
T d2gpra_ 93 SFVTQDQEVNAGDKLVTVDLKSVAKKVPSIKSPIIFTNNGGKT---LEIVKMGEVKQGDVVAILK 154 (154)
T ss_dssp ECCCTTCEECTTCEEEEECHHHHHHHSSCCCEEEEEEECSSCC---CSCBCCEEECTTCEEEEEC
T ss_pred EEecCCCEEcCCCEEEEEcHHHHHhcCCCCceEEEEEcCCCce---EEecccCcCcCCCEEEEeC
Confidence 88999999999999999864321 11122111111 2222333589999999885
No 28
>d2f3ga_ b.84.3.1 (A:) Glucose-specific factor III (glsIII) {Escherichia coli [TaxId: 562]}
Probab=93.73 E-value=0.039 Score=44.37 Aligned_cols=75 Identities=20% Similarity=0.306 Sum_probs=47.2
Q ss_pred CCccCCccEEEEecCCCCC----------------------------CCcccCCCEEecCCeEEEEEccce-------ee
Q 023761 201 PPLKCPMAGTFYRSPAPGE----------------------------PPFVKVGDRVQKGQVLCIIEAMKL-------MN 245 (277)
Q Consensus 201 ~~I~APm~G~~~~sp~p~~----------------------------~~~VkvGd~V~kGqvL~~IEamK~-------~~ 245 (277)
..|.||..|++..-.+-+. ..+|++||+|++||.|+.++-..+ ..
T Consensus 39 ~~v~AP~dG~V~~v~~T~HAigi~t~~G~eiLIHiGidTV~L~G~gF~~~v~~Gd~V~~G~~L~~~D~~~i~~~g~~~~t 118 (150)
T d2f3ga_ 39 NKMVAPVDGTIGKIFETNHAFSIESDSGVELFVHFGIDTVELKGEGFKRIAEEGQRVKVGDTVIEFDLPLLEEKAKSTLT 118 (150)
T ss_dssp SEEECSSSEEEEEECTTSSEEEEEETTSCEEEEECSBSGGGGTTTTEEECSCTTCEECTTCEEEEECHHHHHHHCSBCCE
T ss_pred CeEEeecCEEEEEECCCCCEEEEEeCCceEEEEEEccchhhcCCcceEEEecCCCEECCCCEEEEEcHHHHHhcCCCCee
Confidence 4788999998875322111 288999999999999999865322 22
Q ss_pred EEecCCCeEEEEEecCCCCccCCCC-eEEEEc
Q 023761 246 EIEADRSGTIVEIIAEDRKPVSVDT-PLFVIE 276 (277)
Q Consensus 246 eI~Ap~sG~V~~IlVe~Gd~V~~Gq-pL~~Ie 276 (277)
.+--.-......+....|+ |..|+ +|++|+
T Consensus 119 ~vvitn~~~~~~~~~~~g~-v~~g~~~i~~i~ 149 (150)
T d2f3ga_ 119 PVVISNMDEIKELIKLSGS-VTVGETPVIRIK 149 (150)
T ss_dssp EEEETTGGGCSEEEECCSE-ECTTTSEEEEEE
T ss_pred EEEEECcHhcceeeecCCc-EeeCCcEEEEEE
Confidence 2221112223345556665 67775 798875
No 29
>d1y8ob1 b.84.1.1 (B:128-229) Lipoyl domain of dihydrolipoamide acetyltransferase {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.41 E-value=0.025 Score=42.67 Aligned_cols=26 Identities=23% Similarity=0.128 Sum_probs=24.5
Q ss_pred CCeEEEEEecCCCCccCCCCeEEEEc
Q 023761 251 RSGTIVEIIAEDRKPVSVDTPLFVIE 276 (277)
Q Consensus 251 ~sG~V~~IlVe~Gd~V~~GqpL~~Ie 276 (277)
..|+|.+|+++.||.|..|++|+.|+
T Consensus 18 ~eg~i~~w~v~~Gd~V~~gd~l~~vE 43 (102)
T d1y8ob1 18 TMGTVQRWEKKVGEKLSEGDLLAEIE 43 (102)
T ss_dssp SEEEEEEECSCTTCEECTTCEEEEEE
T ss_pred cEEEEEEEEeCCCCEEecCccEEEEE
Confidence 46999999999999999999999986
No 30
>d1brwa3 d.41.3.1 (A:331-433) Pyrimidine nucleoside phosphorylase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=85.58 E-value=0.53 Score=34.94 Aligned_cols=20 Identities=15% Similarity=0.046 Sum_probs=15.7
Q ss_pred EEecCCCCccCCCCeEEEEc
Q 023761 257 EIIAEDRKPVSVDTPLFVIE 276 (277)
Q Consensus 257 ~IlVe~Gd~V~~GqpL~~Ie 276 (277)
.++++.||.|+.|++|++|.
T Consensus 49 ~l~~k~Gd~V~~Gd~l~~i~ 68 (103)
T d1brwa3 49 VLHKKIGDRVQKGEALATIH 68 (103)
T ss_dssp EESCCTTCEECTTCEEEEEE
T ss_pred EEeccCCCEEcCCCeEEEEE
Confidence 45678888888888888873
No 31
>d1e2wa2 b.84.2.2 (A:169-232) Cytochrome f, small domain {Chlamydomonas reinhardtii [TaxId: 3055]}
Probab=82.76 E-value=0.44 Score=32.65 Aligned_cols=57 Identities=19% Similarity=0.253 Sum_probs=30.9
Q ss_pred cCCccEEEEecCCCCCCCcccCCCEEecCCeEEEEEccc-eeeEEecCCCeEEEEEecCCCCccCCCCeEE
Q 023761 204 KCPMAGTFYRSPAPGEPPFVKVGDRVQKGQVLCIIEAMK-LMNEIEADRSGTIVEIIAEDRKPVSVDTPLF 273 (277)
Q Consensus 204 ~APm~G~~~~sp~p~~~~~VkvGd~V~kGqvL~~IEamK-~~~eI~Ap~sG~V~~IlVe~Gd~V~~GqpL~ 273 (277)
.|+..|++.. +..+.. ++|....+|+... -..+..-|+.= +++|++||.|..||+|-
T Consensus 4 na~~aG~Vs~---------I~~~~~-~kg~~~I~I~~~dGe~~~y~Ip~g~---~l~V~eGd~V~~G~~LT 61 (64)
T d1e2wa2 4 NASAAGKIVA---------ITALSE-KKGGFEVSIEKANGEVVVDKIPAGP---DLIVKEGQTVQADQPLT 61 (64)
T ss_dssp BCSSCEEEEE---------EEESSS-SSCCEEEEEECTTSCEEEEEECSSS---CBCCCTTCEECTTCBCB
T ss_pred cCcCCEEEEE---------EEeecc-cCCcEEEEEECCCCCEEEEEcCCCC---eEEECCCCEEeCCCccc
Confidence 4677777765 222211 2444444444433 22333333332 46788888888888874
No 32
>d1brwa3 d.41.3.1 (A:331-433) Pyrimidine nucleoside phosphorylase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=81.48 E-value=0.59 Score=34.68 Aligned_cols=21 Identities=48% Similarity=0.684 Sum_probs=18.3
Q ss_pred CcccCCCEEecCCeEEEEEcc
Q 023761 221 PFVKVGDRVQKGQVLCIIEAM 241 (277)
Q Consensus 221 ~~VkvGd~V~kGqvL~~IEam 241 (277)
++++.||.|++||+||.|=+.
T Consensus 50 l~~k~Gd~V~~Gd~l~~i~~~ 70 (103)
T d1brwa3 50 LHKKIGDRVQKGEALATIHSN 70 (103)
T ss_dssp ESCCTTCEECTTCEEEEEEES
T ss_pred EeccCCCEEcCCCeEEEEEcC
Confidence 459999999999999998554
No 33
>d1uoua3 d.41.3.1 (A:374-480) Thymidine phosphorylase {Human (Homo sapiens) [TaxId: 9606]}
Probab=81.33 E-value=1 Score=33.46 Aligned_cols=20 Identities=15% Similarity=0.356 Sum_probs=16.0
Q ss_pred EEecCCCCccCCCCeEEEEc
Q 023761 257 EIIAEDRKPVSVDTPLFVIE 276 (277)
Q Consensus 257 ~IlVe~Gd~V~~GqpL~~Ie 276 (277)
.++++.||.|+.|++|++|.
T Consensus 47 ~l~~k~Gd~V~~G~~l~~ih 66 (105)
T d1uoua3 47 ELLVDVGQRLRRGTPWLRVH 66 (105)
T ss_dssp EECSCTTCEECTTCEEEEEE
T ss_pred EEeecCCCEEcCCCeEEEEE
Confidence 35678888899999998873
No 34
>d2tpta3 d.41.3.1 (A:336-440) Thymidine phosphorylase {Escherichia coli [TaxId: 562]}
Probab=77.85 E-value=0.7 Score=34.34 Aligned_cols=19 Identities=32% Similarity=0.268 Sum_probs=13.9
Q ss_pred EecCCCCccCCCCeEEEEc
Q 023761 258 IIAEDRKPVSVDTPLFVIE 276 (277)
Q Consensus 258 IlVe~Gd~V~~GqpL~~Ie 276 (277)
++++.||.|+.|++|++|.
T Consensus 50 l~~k~Gd~V~~Gd~l~~i~ 68 (105)
T d2tpta3 50 DMARLGDQVDGQRPLAVIH 68 (105)
T ss_dssp SCCCTTCEEBTTBCSEEEE
T ss_pred EEecCCCEEcCCCeEEEEE
Confidence 5667777788888887763
No 35
>d1e2wa2 b.84.2.2 (A:169-232) Cytochrome f, small domain {Chlamydomonas reinhardtii [TaxId: 3055]}
Probab=77.71 E-value=0.45 Score=32.59 Aligned_cols=21 Identities=38% Similarity=0.428 Sum_probs=18.1
Q ss_pred CCCCCCcccCCCEEecCCeEE
Q 023761 216 APGEPPFVKVGDRVQKGQVLC 236 (277)
Q Consensus 216 ~p~~~~~VkvGd~V~kGqvL~ 236 (277)
+.+..+.|++||.|++||.|.
T Consensus 41 p~g~~l~V~eGd~V~~G~~LT 61 (64)
T d1e2wa2 41 PAGPDLIVKEGQTVQADQPLT 61 (64)
T ss_dssp CSSSCBCCCTTCEECTTCBCB
T ss_pred CCCCeEEECCCCEEeCCCccc
Confidence 556779999999999999874
No 36
>d1uoua3 d.41.3.1 (A:374-480) Thymidine phosphorylase {Human (Homo sapiens) [TaxId: 9606]}
Probab=76.90 E-value=1 Score=33.52 Aligned_cols=20 Identities=25% Similarity=0.473 Sum_probs=17.8
Q ss_pred CcccCCCEEecCCeEEEEEc
Q 023761 221 PFVKVGDRVQKGQVLCIIEA 240 (277)
Q Consensus 221 ~~VkvGd~V~kGqvL~~IEa 240 (277)
++++.||.|++||+||.|=+
T Consensus 48 l~~k~Gd~V~~G~~l~~ih~ 67 (105)
T d1uoua3 48 LLVDVGQRLRRGTPWLRVHR 67 (105)
T ss_dssp ECSCTTCEECTTCEEEEEEE
T ss_pred EeecCCCEEcCCCeEEEEEC
Confidence 56999999999999999944
No 37
>d1ci3m2 b.84.2.2 (M:170-231) Cytochrome f, small domain {Phormidium laminosum [TaxId: 32059]}
Probab=76.39 E-value=0.47 Score=32.06 Aligned_cols=21 Identities=29% Similarity=0.461 Sum_probs=17.6
Q ss_pred CCCCCCcccCCCEEecCCeEE
Q 023761 216 APGEPPFVKVGDRVQKGQVLC 236 (277)
Q Consensus 216 ~p~~~~~VkvGd~V~kGqvL~ 236 (277)
+.+..+.|++||.|++||.|.
T Consensus 39 p~g~~l~V~eGd~V~aG~~LT 59 (62)
T d1ci3m2 39 PAGPELIVSEGEEVAAGAALT 59 (62)
T ss_dssp CSSSCBCCCTTCEECTTCBSB
T ss_pred CCCCEEEECCCCEEeCCCccc
Confidence 456678999999999999874
No 38
>d2tpta3 d.41.3.1 (A:336-440) Thymidine phosphorylase {Escherichia coli [TaxId: 562]}
Probab=75.28 E-value=0.39 Score=35.84 Aligned_cols=20 Identities=30% Similarity=0.577 Sum_probs=18.1
Q ss_pred CcccCCCEEecCCeEEEEEc
Q 023761 221 PFVKVGDRVQKGQVLCIIEA 240 (277)
Q Consensus 221 ~~VkvGd~V~kGqvL~~IEa 240 (277)
+++++||.|++||+||.|=+
T Consensus 50 l~~k~Gd~V~~Gd~l~~i~~ 69 (105)
T d2tpta3 50 DMARLGDQVDGQRPLAVIHA 69 (105)
T ss_dssp SCCCTTCEEBTTBCSEEEEE
T ss_pred EEecCCCEEcCCCeEEEEEC
Confidence 56999999999999999855
No 39
>d1qpoa2 d.41.2.1 (A:2-116) Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), N-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=73.58 E-value=0.79 Score=34.39 Aligned_cols=20 Identities=40% Similarity=0.519 Sum_probs=18.7
Q ss_pred CcccCCCEEecCCeEEEEEc
Q 023761 221 PFVKVGDRVQKGQVLCIIEA 240 (277)
Q Consensus 221 ~~VkvGd~V~kGqvL~~IEa 240 (277)
|+++.|+.|++||+|+.|+.
T Consensus 75 ~~~~DG~~v~~G~~I~~i~G 94 (115)
T d1qpoa2 75 DRVEDGARVPPGEALMTLEA 94 (115)
T ss_dssp EECCTTCEECTTCEEEEEEE
T ss_pred eecCCCCEEecceeEEEEec
Confidence 78999999999999999985
No 40
>d1hcza2 b.84.2.2 (A:168-230) Cytochrome f, small domain {Turnip (Brassica rapa) [TaxId: 3711]}
Probab=71.04 E-value=0.79 Score=31.57 Aligned_cols=26 Identities=19% Similarity=0.198 Sum_probs=21.6
Q ss_pred EEEecCCCCCCCcccCCCEEecCCeE
Q 023761 210 TFYRSPAPGEPPFVKVGDRVQKGQVL 235 (277)
Q Consensus 210 ~~~~sp~p~~~~~VkvGd~V~kGqvL 235 (277)
.+...=+++-+..|++||.|+.||.|
T Consensus 35 ~v~~~IP~GpeLiVseG~~V~adqpL 60 (63)
T d1hcza2 35 QVIDIIPRGLELLVSEGESIKLDQPL 60 (63)
T ss_dssp EEEEEECTTCCBCCCTTCEECTTCBS
T ss_pred EEEEecCCCCeEEEcCCCEEECCCcc
Confidence 45555678888999999999999976
No 41
>d1o4ua2 d.41.2.1 (A:1-103) Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=70.79 E-value=1.1 Score=32.70 Aligned_cols=20 Identities=25% Similarity=0.205 Sum_probs=18.7
Q ss_pred CcccCCCEEecCCeEEEEEc
Q 023761 221 PFVKVGDRVQKGQVLCIIEA 240 (277)
Q Consensus 221 ~~VkvGd~V~kGqvL~~IEa 240 (277)
|+++.|+.|++|++|+.|+.
T Consensus 63 ~~~~dG~~v~~g~~I~~i~G 82 (103)
T d1o4ua2 63 FNVEDGEYLEGTGVIGEIEG 82 (103)
T ss_dssp ESCCTTCEEESCEEEEEEEE
T ss_pred eecCCCCEEEcCceEEEEec
Confidence 78999999999999999975
No 42
>d1qapa2 d.41.2.1 (A:8-129) Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), N-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=70.05 E-value=1.2 Score=33.72 Aligned_cols=20 Identities=20% Similarity=0.283 Sum_probs=18.9
Q ss_pred CcccCCCEEecCCeEEEEEc
Q 023761 221 PFVKVGDRVQKGQVLCIIEA 240 (277)
Q Consensus 221 ~~VkvGd~V~kGqvL~~IEa 240 (277)
|+++.||.|++|++|+.|+.
T Consensus 82 ~~~~DG~~v~~G~~i~~i~G 101 (122)
T d1qapa2 82 WHVDDGDAIHANQTVFELQG 101 (122)
T ss_dssp ESCCTTCEECTTCEEEEEEE
T ss_pred ecccCccEEecCceEEEEEE
Confidence 89999999999999999985
No 43
>d1tu2b2 b.84.2.2 (B:170-235) Cytochrome f, small domain {Anabaena sp., strain PCC 7120 [TaxId: 1167]}
Probab=68.33 E-value=0.96 Score=31.39 Aligned_cols=32 Identities=25% Similarity=0.391 Sum_probs=23.0
Q ss_pred ccCCccEE-EEecCCCCCCCcccCCCEEecCCeE
Q 023761 203 LKCPMAGT-FYRSPAPGEPPFVKVGDRVQKGQVL 235 (277)
Q Consensus 203 I~APm~G~-~~~sp~p~~~~~VkvGd~V~kGqvL 235 (277)
|... .|. +...=+++-+..|++||.|+.||.|
T Consensus 30 I~t~-~G~~v~e~IP~GpeLiVseG~~VkadqpL 62 (66)
T d1tu2b2 30 IKTE-SGEVVSDTIPAGPELIVSEGQAVTAGDAL 62 (66)
T ss_dssp EETT-TTEEECCEECSSCCBSCCTTCEECTTCBS
T ss_pred EecC-CCCEEEEecCCCCeEEEcCCCEEecCCcc
Confidence 4443 354 3344567778999999999999976
No 44
>d1vf5c2 b.84.2.2 (C:170-231) Cytochrome f, small domain {Mastigocladus laminosus [TaxId: 83541]}
Probab=61.40 E-value=0.98 Score=30.98 Aligned_cols=34 Identities=21% Similarity=0.368 Sum_probs=25.4
Q ss_pred CCccCCccEE-EEecCCCCCCCcccCCCEEecCCeE
Q 023761 201 PPLKCPMAGT-FYRSPAPGEPPFVKVGDRVQKGQVL 235 (277)
Q Consensus 201 ~~I~APm~G~-~~~sp~p~~~~~VkvGd~V~kGqvL 235 (277)
+.|... .|. +...=+++-+..|++||.|+.||.|
T Consensus 28 vtI~t~-dG~~v~~~IP~GpeLiVseG~~VkadqpL 62 (62)
T d1vf5c2 28 VSIQTD-SGKTVVDTIPAGPELIVSEGQAVKAGEAL 62 (62)
T ss_dssp CBCCCC-SSSCCCCCCCSSSCCCCCTTCCCTTSCCC
T ss_pred EEEECC-CCCEEEEeeCCCCeEEEcCCCEEeCCCCC
Confidence 455544 464 5555678888999999999999975
No 45
>d1ci3m2 b.84.2.2 (M:170-231) Cytochrome f, small domain {Phormidium laminosum [TaxId: 32059]}
Probab=48.13 E-value=1.9 Score=28.82 Aligned_cols=56 Identities=14% Similarity=0.174 Sum_probs=32.6
Q ss_pred ccCCccEEEEecCCCCCCCcccCCCEEecCCeEEEEEccc-eeeEEecCCCeEEEEEecCCCCccCCCCeEE
Q 023761 203 LKCPMAGTFYRSPAPGEPPFVKVGDRVQKGQVLCIIEAMK-LMNEIEADRSGTIVEIIAEDRKPVSVDTPLF 273 (277)
Q Consensus 203 I~APm~G~~~~sp~p~~~~~VkvGd~V~kGqvL~~IEamK-~~~eI~Ap~sG~V~~IlVe~Gd~V~~GqpL~ 273 (277)
..|+..|++.. +. .-.+|-...+|+... -..+..-|..- .++|++||.|..||+|.
T Consensus 3 ~~A~~~G~V~~---------i~---~~~~g~~~I~I~~~~G~~~~y~Ip~g~---~l~V~eGd~V~aG~~LT 59 (62)
T d1ci3m2 3 YNASAAGVITA---------IA---KADDGSAEVKIRTEDGTTIVDKIPAGP---ELIVSEGEEVAAGAALT 59 (62)
T ss_dssp CBCSSCEEEEE---------EE---ECTTSCEEEEEECTTSCEEEEEECSSS---CBCCCTTCEECTTCBSB
T ss_pred EeCccCEEEEE---------eE---eccCCCEEEEEECCCCCEEEEEcCCCC---EEEECCCCEEeCCCccc
Confidence 45888898865 11 112344455554433 22222333322 47799999999999984
No 46
>d1qwya_ b.84.3.2 (A:) Peptidoglycan hydrolase LytM {Staphylococcus aureus [TaxId: 1280]}
Probab=46.83 E-value=4.2 Score=34.85 Aligned_cols=19 Identities=26% Similarity=0.415 Sum_probs=15.9
Q ss_pred CcccCCCEEecCCeEEEEE
Q 023761 221 PFVKVGDRVQKGQVLCIIE 239 (277)
Q Consensus 221 ~~VkvGd~V~kGqvL~~IE 239 (277)
+.|++||.|++||+|+.+-
T Consensus 220 ~~V~~Gq~V~~Gq~IG~vG 238 (270)
T d1qwya_ 220 LTVSAGDKVKAGDQIAYSG 238 (270)
T ss_dssp ECCCTTCEECTTCEEEECC
T ss_pred eecCCCCEECcCCEEEEeC
Confidence 6688999999999998874
No 47
>d1qpoa2 d.41.2.1 (A:2-116) Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), N-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=46.64 E-value=8.2 Score=28.39 Aligned_cols=25 Identities=28% Similarity=0.242 Sum_probs=21.3
Q ss_pred CeEEEEEecCCCCccCCCCeEEEEc
Q 023761 252 SGTIVEIIAEDRKPVSVDTPLFVIE 276 (277)
Q Consensus 252 sG~V~~IlVe~Gd~V~~GqpL~~Ie 276 (277)
.+.-...++++|+.|..|+.|++|+
T Consensus 69 ~~i~~~~~~~DG~~v~~G~~I~~i~ 93 (115)
T d1qpoa2 69 NGYRVLDRVEDGARVPPGEALMTLE 93 (115)
T ss_dssp TSEEEEEECCTTCEECTTCEEEEEE
T ss_pred cccceeeecCCCCEEecceeEEEEe
Confidence 4555668899999999999999985
No 48
>d1qapa2 d.41.2.1 (A:8-129) Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), N-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=40.88 E-value=7.4 Score=28.93 Aligned_cols=22 Identities=9% Similarity=0.294 Sum_probs=19.2
Q ss_pred EEEEecCCCCccCCCCeEEEEc
Q 023761 255 IVEIIAEDRKPVSVDTPLFVIE 276 (277)
Q Consensus 255 V~~IlVe~Gd~V~~GqpL~~Ie 276 (277)
-.++++++|+.|..|+.|++|+
T Consensus 79 ~~~~~~~DG~~v~~G~~i~~i~ 100 (122)
T d1qapa2 79 RLTWHVDDGDAIHANQTVFELQ 100 (122)
T ss_dssp EEEESCCTTCEECTTCEEEEEE
T ss_pred EEEecccCccEEecCceEEEEE
Confidence 3458899999999999999985
No 49
>d2vv5a1 b.38.1.3 (A:113-179) Mechanosensitive channel protein MscS (YggB), middle domain {Escherichia coli [TaxId: 562]}
Probab=37.58 E-value=19 Score=23.72 Aligned_cols=35 Identities=17% Similarity=0.327 Sum_probs=26.5
Q ss_pred cccCCCEEecCCeEEEEEccceeeEEecCCCeEEE
Q 023761 222 FVKVGDRVQKGQVLCIIEAMKLMNEIEADRSGTIV 256 (277)
Q Consensus 222 ~VkvGd~V~kGqvL~~IEamK~~~eI~Ap~sG~V~ 256 (277)
..++||.|+-|+..+.|+.+.+....--..+|.+.
T Consensus 17 pf~vGD~I~i~~~~G~V~~I~l~~T~l~~~dg~~i 51 (67)
T d2vv5a1 17 PFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKII 51 (67)
T ss_dssp SSCTTCEEESSSCEEEEEEECSSEEEEECTTSCEE
T ss_pred CccCCCEEEECCEEEEEEEEeceEEEEEccCCCEE
Confidence 47899999999999999988876554333466554
No 50
>d1o4ua2 d.41.2.1 (A:1-103) Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=36.10 E-value=6.7 Score=28.08 Aligned_cols=22 Identities=18% Similarity=0.090 Sum_probs=19.1
Q ss_pred EEEEecCCCCccCCCCeEEEEc
Q 023761 255 IVEIIAEDRKPVSVDTPLFVIE 276 (277)
Q Consensus 255 V~~IlVe~Gd~V~~GqpL~~Ie 276 (277)
=..+++++|+.|..|+.|++++
T Consensus 60 ~v~~~~~dG~~v~~g~~I~~i~ 81 (103)
T d1o4ua2 60 LSKFNVEDGEYLEGTGVIGEIE 81 (103)
T ss_dssp EEEESCCTTCEEESCEEEEEEE
T ss_pred ceeeecCCCCEEEcCceEEEEe
Confidence 3568899999999999999875
No 51
>d1vf7a_ f.46.1.1 (A:) Multidrug resistance protein MexA domain {Pseudomonas aeruginosa [TaxId: 287]}
Probab=26.60 E-value=35 Score=26.07 Aligned_cols=28 Identities=29% Similarity=0.394 Sum_probs=24.6
Q ss_pred CCccCCccEEEEecCCCCCCCcccCCCEEecCCeE
Q 023761 201 PPLKCPMAGTFYRSPAPGEPPFVKVGDRVQKGQVL 235 (277)
Q Consensus 201 ~~I~APm~G~~~~sp~p~~~~~VkvGd~V~kGqvL 235 (277)
..|++|+.|.+.. +.+..|+.+..|..+
T Consensus 110 ~~i~ap~~G~v~~-------~~~~~g~~~~~~~~~ 137 (237)
T d1vf7a_ 110 TKVLSPISGRIGR-------SAVTEGALVTNGQAN 137 (237)
T ss_dssp TEEECSSSEEECC-------CSSCBTCEECTTCSS
T ss_pred cccccchhceeee-------EEeccCcEEcCCcce
Confidence 4799999999988 889999999998744
No 52
>d1qwya_ b.84.3.2 (A:) Peptidoglycan hydrolase LytM {Staphylococcus aureus [TaxId: 1280]}
Probab=22.13 E-value=34 Score=28.75 Aligned_cols=21 Identities=5% Similarity=-0.035 Sum_probs=18.2
Q ss_pred EEEEecCCCCccCCCCeEEEE
Q 023761 255 IVEIIAEDRKPVSVDTPLFVI 275 (277)
Q Consensus 255 V~~IlVe~Gd~V~~GqpL~~I 275 (277)
+.++.|+.||.|..|+.|..+
T Consensus 217 l~~~~V~~Gq~V~~Gq~IG~v 237 (270)
T d1qwya_ 217 NNRLTVSAGDKVKAGDQIAYS 237 (270)
T ss_dssp ESEECCCTTCEECTTCEEEEC
T ss_pred CCeeecCCCCEECcCCEEEEe
Confidence 446889999999999999875
Done!