Query 023762
Match_columns 277
No_of_seqs 112 out of 399
Neff 6.0
Searched_HMMs 13730
Date Mon Mar 25 12:22:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023762.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/023762hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1wwra1 c.97.1.2 (A:1-151) tRN 63.2 15 0.0011 27.7 8.1 13 131-143 73-85 (151)
2 d2g84a1 c.97.1.2 (A:1-189) Put 59.7 2.6 0.00019 33.9 2.9 41 35-86 48-88 (189)
3 d1wkqa_ c.97.1.2 (A:) Guanine 52.6 4.3 0.00031 31.4 3.1 15 74-88 54-68 (158)
4 d1p6oa_ c.97.1.2 (A:) Cytosine 36.1 3.5 0.00026 32.0 -0.0 12 132-143 81-92 (156)
5 d1qr0a1 d.150.1.1 (A:1-101) 4' 24.1 25 0.0018 24.4 2.9 52 72-137 39-90 (101)
6 d1bdsa_ g.9.1.1 (A:) BDs-I def 18.5 14 0.001 21.8 0.4 8 188-195 8-15 (43)
7 d2cqea1 g.66.1.1 (A:458-513) Z 16.0 47 0.0034 21.2 2.6 28 54-81 8-35 (56)
8 d1nbja_ g.3.3.2 (A:) Cycloviol 15.5 6.2 0.00045 22.0 -1.7 9 198-206 17-25 (30)
9 d1mxaa1 d.130.1.1 (A:1-102) S- 11.1 58 0.0042 23.1 2.1 19 4-22 16-34 (102)
10 d1lmra_ g.3.6.3 (A:) ADO1 {Ass 10.0 66 0.0048 18.1 1.6 17 52-68 6-22 (35)
No 1
>d1wwra1 c.97.1.2 (A:1-151) tRNA adenosine deaminase TadA {Aquifex aeolicus [TaxId: 63363]}
Probab=63.18 E-value=15 Score=27.71 Aligned_cols=13 Identities=31% Similarity=0.590 Sum_probs=10.2
Q ss_pred EEEEeccCCCCcc
Q 023762 131 LHLYISQLPCGDA 143 (277)
Q Consensus 131 lhlYiS~~PCGdA 143 (277)
.-||+|-.||--+
T Consensus 73 ~tlY~TlEPC~mC 85 (151)
T d1wwra1 73 CELYVTLEPCIMC 85 (151)
T ss_dssp EEEEESSCCBHHH
T ss_pred cEeeecccCCcHH
Confidence 3599999999544
No 2
>d2g84a1 c.97.1.2 (A:1-189) Putative deaminase NE0047 {Nitrosomonas europaea [TaxId: 915]}
Probab=59.71 E-value=2.6 Score=33.89 Aligned_cols=41 Identities=27% Similarity=0.280 Sum_probs=22.0
Q ss_pred EEEEEEecCCCCeEEEEEeeCCCcccCCccCCCCCccchhHHHHHHHHHHHH
Q 023762 35 LAAFLISSPSKDLEVVALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLR 86 (277)
Q Consensus 35 LA~iVl~~~~~~~~vVSLgTGtKc~~~~~l~~~G~~lhD~HAEVLARR~f~r 86 (277)
++|+|+.. ++-+||+-|.-. .. ..|+.. .|||++|.|-.-+
T Consensus 48 ~GaviV~~--~~g~Iia~g~N~-~~------~~~dpt--~HAEi~AI~~A~~ 88 (189)
T d2g84a1 48 FAAAVFER--DSGLLIAAGTNR-VV------PGRCSA--AHAEILALSLAQA 88 (189)
T ss_dssp CEEEEEET--TTCBEEEEEECC-TT------TTTCTT--CCHHHHHHHHHHH
T ss_pred EEEEEEEC--CCCEEEEEEcCC-cC------cCCCCc--ccHHHHHHHHHHH
Confidence 45555532 234888866433 11 122221 1999999876533
No 3
>d1wkqa_ c.97.1.2 (A:) Guanine deaminase GuaD {Bacillus subtilis [TaxId: 1423]}
Probab=52.63 E-value=4.3 Score=31.42 Aligned_cols=15 Identities=33% Similarity=0.503 Sum_probs=11.4
Q ss_pred hHHHHHHHHHHHHHH
Q 023762 74 SHAEIVARRALLRFF 88 (277)
Q Consensus 74 ~HAEVLARR~f~r~L 88 (277)
.|||+.|.|...+.|
T Consensus 54 ~HAE~~ai~~a~~~~ 68 (158)
T d1wkqa_ 54 AHAEVTAIRKACKVL 68 (158)
T ss_dssp CCHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHhc
Confidence 599999998764444
No 4
>d1p6oa_ c.97.1.2 (A:) Cytosine deaminase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=36.13 E-value=3.5 Score=31.97 Aligned_cols=12 Identities=33% Similarity=0.706 Sum_probs=9.6
Q ss_pred EEEeccCCCCcc
Q 023762 132 HLYISQLPCGDA 143 (277)
Q Consensus 132 hlYiS~~PCGdA 143 (277)
-||+|-.||-.+
T Consensus 81 tlyvTlEPC~mC 92 (156)
T d1p6oa_ 81 TLYTTLSPCDMC 92 (156)
T ss_dssp EEEEEECCCHHH
T ss_pred EEEeeccCCHHH
Confidence 589999999443
No 5
>d1qr0a1 d.150.1.1 (A:1-101) 4'-Phosphopantetheinyl transferase SFP {Bacillus subtilis [TaxId: 1423]}
Probab=24.06 E-value=25 Score=24.44 Aligned_cols=52 Identities=19% Similarity=0.177 Sum_probs=29.1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhhccCCCcccccCCCCcceeEeeCCCCceEeeCCcEEEEEecc
Q 023762 72 NDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGPTGKYRFREGWQLHLYISQ 137 (277)
Q Consensus 72 hD~HAEVLARR~f~r~Ly~el~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~Lk~~v~lhlYiS~ 137 (277)
.|.+.= |+-|.|+|+++.+.... .+..+.|..++.|+=.|...-.+||=+|+
T Consensus 39 ~dr~~~-l~~r~llr~~l~~~~~~-------------~p~~i~~~~~~~GKP~l~~~~~i~FNiSH 90 (101)
T d1qr0a1 39 EDAHRT-LLGDVLVRSVISRQYQL-------------DKSDIRFSTQEYGKPCIPDLPDAHFNISH 90 (101)
T ss_dssp HHHHHH-HHHHHHHHHHHHHHTTC-------------CGGGCCCEECTTSCEECTTCTTCEEEEEE
T ss_pred HHHHHH-HHHHHHHHHHHHHHhCC-------------CccceeEEeCCCCCccccCCCCcEEEecc
Confidence 344433 44466777776554322 12456677778886556544445666665
No 6
>d1bdsa_ g.9.1.1 (A:) BDs-I defensin {Sea anemone (Anemonia sulcata) [TaxId: 6108]}
Probab=18.54 E-value=14 Score=21.84 Aligned_cols=8 Identities=75% Similarity=1.294 Sum_probs=6.4
Q ss_pred eCCCCCCc
Q 023762 188 RKPGRGDT 195 (277)
Q Consensus 188 tKPGrgd~ 195 (277)
-||||||-
T Consensus 8 gkpgrgdl 15 (43)
T d1bdsa_ 8 GKPGRGDL 15 (43)
T ss_dssp SCCSCCEE
T ss_pred CCCCCCcE
Confidence 48999983
No 7
>d2cqea1 g.66.1.1 (A:458-513) Zinc finger CCCH domain-containing protein C19orf7 (KIAA1064) {Human (Homo sapiens) [TaxId: 9606]}
Probab=15.99 E-value=47 Score=21.20 Aligned_cols=28 Identities=18% Similarity=0.254 Sum_probs=19.4
Q ss_pred eCCCcccCCccCCCCCccchhHHHHHHH
Q 023762 54 TGTKCIGRSLLSPHGDIVNDSHAEIVAR 81 (277)
Q Consensus 54 TGtKc~~~~~l~~~G~~lhD~HAEVLAR 81 (277)
||+||..++.=...=.-|.|---|+|++
T Consensus 8 tg~kCy~gd~C~FSH~pLt~~t~~lL~K 35 (56)
T d2cqea1 8 TTGNCINGDDCMFSHDPLTEETRELLDK 35 (56)
T ss_dssp HTSCCSSCTTCSSBCCCCCHHHHHHHHH
T ss_pred cCCcccCCCcccccCCccCHHHHHHHHH
Confidence 8999998765433336788877676654
No 8
>d1nbja_ g.3.3.2 (A:) Cycloviolacin O1 {Plant (Viola odorata) [TaxId: 97441]}
Probab=15.47 E-value=6.2 Score=21.99 Aligned_cols=9 Identities=33% Similarity=0.918 Sum_probs=6.4
Q ss_pred ccchhhHHH
Q 023762 198 SVSCSDKIA 206 (277)
Q Consensus 198 smSCSDKla 206 (277)
--|||||++
T Consensus 17 gc~c~~kvc 25 (30)
T d1nbja_ 17 GCSCSNRVC 25 (30)
T ss_dssp TCEEETTEE
T ss_pred cccccCcee
Confidence 348888865
No 9
>d1mxaa1 d.130.1.1 (A:1-102) S-adenosylmethionine synthetase {Escherichia coli [TaxId: 562]}
Probab=11.12 E-value=58 Score=23.07 Aligned_cols=19 Identities=21% Similarity=0.134 Sum_probs=15.9
Q ss_pred cchHHHHHHHHHHHHhcCC
Q 023762 4 ECWGDEVSKKVLWQYKSLP 22 (277)
Q Consensus 4 ~~~ad~Ia~~v~~~y~~L~ 22 (277)
+.++|+|++++++.|-+.-
T Consensus 16 DKicDqISDaIlD~~L~~D 34 (102)
T d1mxaa1 16 DKIADQISDAVLDAILEQD 34 (102)
T ss_dssp HHHHHHHHHHHHHHHHTTC
T ss_pred cHHHHHHHHHHHHHHHHhC
Confidence 4589999999999997653
No 10
>d1lmra_ g.3.6.3 (A:) ADO1 {Assassin bug (Agriosphodrus dohrni) [TaxId: 184613]}
Probab=10.02 E-value=66 Score=18.07 Aligned_cols=17 Identities=35% Similarity=0.710 Sum_probs=11.6
Q ss_pred EeeCCCcccCCccCCCC
Q 023762 52 LGTGTKCIGRSLLSPHG 68 (277)
Q Consensus 52 LgTGtKc~~~~~l~~~G 68 (277)
|--|+||+|..+-.-.|
T Consensus 6 lprgskclgenkqcc~~ 22 (35)
T d1lmra_ 6 LPRGSKCLGENKQCCKG 22 (35)
T ss_dssp CCTTCCCSSCCCCCCTT
T ss_pred ccccccccccchhhccC
Confidence 45689999887654443
Done!