BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023765
(277 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|449485688|ref|XP_004157245.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
Length = 322
Score = 349 bits (896), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 201/257 (78%), Positives = 213/257 (82%), Gaps = 14/257 (5%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSR+SRT+YVGNLPGD R+REVEDLFYKYGPIVDIDLKIPPRPPGYAF+EFED RDAED
Sbjct: 1 MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRG-VSRRSDYRVLVTGLPS 119
AI GRDGY FDG RLRVE AHGGR HSSS+DRYS SG SRG V RR+DYRVLVTGLPS
Sbjct: 61 AIYGRDGYKFDGCRLRVEFAHGGRGHSSSVDRYSR--SGSSRGGVPRRTDYRVLVTGLPS 118
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRS 179
SASWQDLKDHMRRAGDVCFS+VFRDRGGM GIVDYT+YDDMKYAIRKLD SEFRNAFSR+
Sbjct: 119 SASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRA 178
Query: 180 YVRVREYDSRRSYSRSP---SRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSR------- 229
YVRV+EYDSR SYSRSP SR YSRS SRSPY R RS SRS S S
Sbjct: 179 YVRVKEYDSRHSYSRSPSLDSRRSDYSRSPSRSPYRGRGRSQSRSRSRSRSRSRSYSGRS 238
Query: 230 -SYSPRGKYSRRSPSLS 245
S SPR K+SRRS S+S
Sbjct: 239 TSLSPRHKHSRRSRSVS 255
>gi|357441751|ref|XP_003591153.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355480201|gb|AES61404.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 290
Score = 341 bits (874), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 195/246 (79%), Positives = 210/246 (85%), Gaps = 3/246 (1%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS RSSRTLYVGNLPGD R+REVEDLFYKYGPIVDIDLKIPP+PPGYAF+EFED RDA+D
Sbjct: 32 MSGRSSRTLYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQD 91
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSS-GGSRGVSRRSDYRVLVTGLPS 119
AI RDGY+FDGYRL VELAHGGR SSS+DRYS +S GSRGVSRRSDYRVLVTGLP
Sbjct: 92 AIYYRDGYDFDGYRLLVELAHGGRGSSSSVDRYSRHSGRSGSRGVSRRSDYRVLVTGLPP 151
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRS 179
SASWQDLKDHMR+AG VCFSQVFR+RGG+TGIVDYT+YDD+KYAIRKLD SEFRNAFSRS
Sbjct: 152 SASWQDLKDHMRKAGHVCFSQVFRERGGLTGIVDYTNYDDVKYAIRKLDDSEFRNAFSRS 211
Query: 180 YVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYSPRGKYSR 239
Y+RVREYD S S S S SRSRSPY SRSRS S S SYS RSRS SP+ K+SR
Sbjct: 212 YIRVREYDRSHSRSPSRDSRR--SYSRSRSPYVSRSRSCSLSHSYSGRSRSLSPKAKHSR 269
Query: 240 RSPSLS 245
RS SLS
Sbjct: 270 RSFSLS 275
>gi|388515137|gb|AFK45630.1| unknown [Medicago truncatula]
Length = 259
Score = 339 bits (870), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 195/246 (79%), Positives = 210/246 (85%), Gaps = 3/246 (1%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS RSSRTLYVGNLPGD R+REVEDLFYKYGPIVDIDLKIPP+PPGYAF+EFED RDA+D
Sbjct: 1 MSGRSSRTLYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQD 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSS-GGSRGVSRRSDYRVLVTGLPS 119
AI RDGY+FDGYRL VELAHGGR SSS+DRYS +S GSRGVSRRSDYRVLVTGLP
Sbjct: 61 AIYYRDGYDFDGYRLLVELAHGGRGSSSSVDRYSRHSGRSGSRGVSRRSDYRVLVTGLPP 120
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRS 179
SASWQDLKDHMR+AG VCFSQVFR+RGG+TGIVDYT+YDD+KYAIRKLD SEFRNAFSRS
Sbjct: 121 SASWQDLKDHMRKAGHVCFSQVFRERGGLTGIVDYTNYDDVKYAIRKLDDSEFRNAFSRS 180
Query: 180 YVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYSPRGKYSR 239
Y+RVREYD S S S S SRSRSPY SRSRS S S SYS RSRS SP+ K+SR
Sbjct: 181 YIRVREYDRSHSRSPSRDSRR--SYSRSRSPYVSRSRSCSLSHSYSGRSRSLSPKAKHSR 238
Query: 240 RSPSLS 245
RS SLS
Sbjct: 239 RSFSLS 244
>gi|255542756|ref|XP_002512441.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223548402|gb|EEF49893.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 300
Score = 339 bits (869), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 210/268 (78%), Positives = 221/268 (82%), Gaps = 9/268 (3%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSR+SRTLYVGNLPGD R REV+DLFYKYGPIV++DLKIPPRPPGYAF+EFED RDAED
Sbjct: 38 MSSRASRTLYVGNLPGDIRQREVKDLFYKYGPIVEVDLKIPPRPPGYAFVEFEDARDAED 97
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV-SRRSDYRVLVTGLPS 119
AIRGRDGYNFDG RLRVELAHGGRRHSS DRYSSYS SRRSDYRVLVTGLPS
Sbjct: 98 AIRGRDGYNFDGCRLRVELAHGGRRHSSPGDRYSSYSGRSGSRGPSRRSDYRVLVTGLPS 157
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRS 179
SASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYT+YDDMK+AI+KLD SEFRNAFSRS
Sbjct: 158 SASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRS 217
Query: 180 YVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYSPRGKYSR 239
YVRVREYDSRRSYSRSPS PY RSRS SR+RS W SRS SP KY
Sbjct: 218 YVRVREYDSRRSYSRSPSCGPY---DRSRSRSRSRTRSRHSDW-----SRSKSPGAKYHS 269
Query: 240 RSPSLSPARSASQRSPSGSPPRSFSRSG 267
RS S+SP RS S RS +GS PRS S G
Sbjct: 270 RSLSVSPGRSVSPRSHAGSSPRSSSNLG 297
>gi|449435631|ref|XP_004135598.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
Length = 315
Score = 338 bits (866), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 195/256 (76%), Positives = 207/256 (80%), Gaps = 19/256 (7%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSR+SRT+YVGNLPGD R+REVEDLFYKYGPIVDIDLKIPPRPPGYAF+EFED RDAED
Sbjct: 1 MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRDGY FDG RLRVE AHGGR HSSS+DRYS SG SR D+ VLVTGLPSS
Sbjct: 61 AIYGRDGYKFDGCRLRVEFAHGGRGHSSSVDRYS--RSGSSR------DFAVLVTGLPSS 112
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSY 180
ASWQDLKDHMRRAGDVCFS+VFRDRGGM GIVDYT+YDDMKYAIRKLD SEFRNAFSR+Y
Sbjct: 113 ASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAY 172
Query: 181 VRVREYDSRRSYSRSP---SRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSR-------- 229
VRV+EYDSR SYSRSP SR YSRS SRSPY R RS SRS S S
Sbjct: 173 VRVKEYDSRHSYSRSPSLDSRRSDYSRSPSRSPYRGRGRSQSRSRSRSRSRSRSYSGRST 232
Query: 230 SYSPRGKYSRRSPSLS 245
S SPR K+SRRS S+S
Sbjct: 233 SLSPRHKHSRRSRSVS 248
>gi|217073712|gb|ACJ85216.1| unknown [Medicago truncatula]
Length = 246
Score = 335 bits (860), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 192/242 (79%), Positives = 207/242 (85%), Gaps = 3/242 (1%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS RSSRTLYVGNLPGD R+REVEDLFYKYGPIVDIDLKIPP+PPGYAF+EFED RDA+D
Sbjct: 1 MSGRSSRTLYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQD 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSS-GGSRGVSRRSDYRVLVTGLPS 119
AI RDGY+FDGYRL VELAHGGR SSS+DRYS +S GSRGVSRRSDYRVLVTGLP
Sbjct: 61 AIYYRDGYDFDGYRLLVELAHGGRGSSSSVDRYSRHSGRSGSRGVSRRSDYRVLVTGLPP 120
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRS 179
SASWQDLKDHMR+AG VCFSQVFR+RGG+TGIVDYT+YDD+KYAIRKLD SEFRNAFSRS
Sbjct: 121 SASWQDLKDHMRKAGHVCFSQVFRERGGLTGIVDYTNYDDVKYAIRKLDDSEFRNAFSRS 180
Query: 180 YVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYSPRGKYSR 239
Y+RVREYD S S S S SRSRSPY SRSRS S S SYS RSRS SP+ K+SR
Sbjct: 181 YIRVREYDRSHSRSPSRDSRR--SYSRSRSPYVSRSRSCSLSHSYSGRSRSLSPKAKHSR 238
Query: 240 RS 241
RS
Sbjct: 239 RS 240
>gi|148909953|gb|ABR18062.1| unknown [Picea sitchensis]
Length = 331
Score = 328 bits (840), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 163/188 (86%), Positives = 171/188 (90%), Gaps = 2/188 (1%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSR+SRTLYVGNLPGD R REVEDLFYKYGPIVDIDLKIPPRPPGY F+EFED RDAED
Sbjct: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIVDIDLKIPPRPPGYCFIEFEDARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR--GVSRRSDYRVLVTGLP 118
AIRGRDGYNFDG RLRVELAHGGR SS+ DRYSSYSS G R GVSRRS+YRVLV+GLP
Sbjct: 61 AIRGRDGYNFDGNRLRVELAHGGRGQSSTNDRYSSYSSAGGRSGGVSRRSEYRVLVSGLP 120
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSR 178
SSASWQDLKDHMRRAGDVCFSQVFRD G TGIVDYT+YDDMKYAIRKLD SEFRNAFSR
Sbjct: 121 SSASWQDLKDHMRRAGDVCFSQVFRDSSGTTGIVDYTNYDDMKYAIRKLDDSEFRNAFSR 180
Query: 179 SYVRVREY 186
Y+RV+EY
Sbjct: 181 GYIRVKEY 188
>gi|357441755|ref|XP_003591155.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355480203|gb|AES61406.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 316
Score = 326 bits (836), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 184/233 (78%), Positives = 199/233 (85%), Gaps = 3/233 (1%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS RSSRTLYVGNLPGD R+REVEDLFYKYGPIVDIDLKIPP+PPGYAF+EFED RDA+D
Sbjct: 32 MSGRSSRTLYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQD 91
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSS-GGSRGVSRRSDYRVLVTGLPS 119
AI RDGY+FDGYRL VELAHGGR SSS+DRYS +S GSRGVSRRSDYRVLVTGLP
Sbjct: 92 AIYYRDGYDFDGYRLLVELAHGGRGSSSSVDRYSRHSGRSGSRGVSRRSDYRVLVTGLPP 151
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRS 179
SASWQDLKDHMR+AG VCFSQVFR+RGG+TGIVDYT+YDD+KYAIRKLD SEFRNAFSRS
Sbjct: 152 SASWQDLKDHMRKAGHVCFSQVFRERGGLTGIVDYTNYDDVKYAIRKLDDSEFRNAFSRS 211
Query: 180 YVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYS 232
Y+RVREYD S S S S SRSRSPY SRSRS S S SYS RSR ++
Sbjct: 212 YIRVREYDRSHSRSPSRDSRR--SYSRSRSPYVSRSRSCSLSHSYSGRSRRFT 262
>gi|357441753|ref|XP_003591154.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355480202|gb|AES61405.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 322
Score = 326 bits (836), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 184/233 (78%), Positives = 199/233 (85%), Gaps = 3/233 (1%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS RSSRTLYVGNLPGD R+REVEDLFYKYGPIVDIDLKIPP+PPGYAF+EFED RDA+D
Sbjct: 32 MSGRSSRTLYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQD 91
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSS-GGSRGVSRRSDYRVLVTGLPS 119
AI RDGY+FDGYRL VELAHGGR SSS+DRYS +S GSRGVSRRSDYRVLVTGLP
Sbjct: 92 AIYYRDGYDFDGYRLLVELAHGGRGSSSSVDRYSRHSGRSGSRGVSRRSDYRVLVTGLPP 151
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRS 179
SASWQDLKDHMR+AG VCFSQVFR+RGG+TGIVDYT+YDD+KYAIRKLD SEFRNAFSRS
Sbjct: 152 SASWQDLKDHMRKAGHVCFSQVFRERGGLTGIVDYTNYDDVKYAIRKLDDSEFRNAFSRS 211
Query: 180 YVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYS 232
Y+RVREYD S S S S SRSRSPY SRSRS S S SYS RSR ++
Sbjct: 212 YIRVREYDRSHSRSPSRDSRR--SYSRSRSPYVSRSRSCSLSHSYSGRSRRFT 262
>gi|357441749|ref|XP_003591152.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355480200|gb|AES61403.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 334
Score = 326 bits (835), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 184/233 (78%), Positives = 199/233 (85%), Gaps = 3/233 (1%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS RSSRTLYVGNLPGD R+REVEDLFYKYGPIVDIDLKIPP+PPGYAF+EFED RDA+D
Sbjct: 32 MSGRSSRTLYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQD 91
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSS-GGSRGVSRRSDYRVLVTGLPS 119
AI RDGY+FDGYRL VELAHGGR SSS+DRYS +S GSRGVSRRSDYRVLVTGLP
Sbjct: 92 AIYYRDGYDFDGYRLLVELAHGGRGSSSSVDRYSRHSGRSGSRGVSRRSDYRVLVTGLPP 151
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRS 179
SASWQDLKDHMR+AG VCFSQVFR+RGG+TGIVDYT+YDD+KYAIRKLD SEFRNAFSRS
Sbjct: 152 SASWQDLKDHMRKAGHVCFSQVFRERGGLTGIVDYTNYDDVKYAIRKLDDSEFRNAFSRS 211
Query: 180 YVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYS 232
Y+RVREYD S S S S SRSRSPY SRSRS S S SYS RSR ++
Sbjct: 212 YIRVREYDRSHSRSPSRDSR--RSYSRSRSPYVSRSRSCSLSHSYSGRSRRFT 262
>gi|224123080|ref|XP_002318990.1| predicted protein [Populus trichocarpa]
gi|222857366|gb|EEE94913.1| predicted protein [Populus trichocarpa]
Length = 224
Score = 317 bits (813), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 162/184 (88%), Positives = 172/184 (93%), Gaps = 1/184 (0%)
Query: 3 SRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAI 62
SR+SRTLYVGNLPGD R+REVEDLFYKYGPIVDIDLKIPPRPPGYAF+EFE+ RDAEDAI
Sbjct: 2 SRASRTLYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEEARDAEDAI 61
Query: 63 RGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGS-RGVSRRSDYRVLVTGLPSSA 121
RGRDGYNFDG RLRVELAHGGRRHSS +D YSSYS RG S+RSDYRVLVTGLPSSA
Sbjct: 62 RGRDGYNFDGCRLRVELAHGGRRHSSPVDHYSSYSGSSGSRGPSKRSDYRVLVTGLPSSA 121
Query: 122 SWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYV 181
SWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYT+YDDMKYAI+KLD SEFRNAFSR+Y+
Sbjct: 122 SWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRAYI 181
Query: 182 RVRE 185
RVRE
Sbjct: 182 RVRE 185
>gi|357516357|ref|XP_003628467.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355522489|gb|AET02943.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 347
Score = 313 bits (801), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 188/249 (75%), Positives = 208/249 (83%), Gaps = 3/249 (1%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS SSRT+YVGNLPGD R REVEDLF KYG I IDLK+PPRPPGYAF+EFED +DAED
Sbjct: 27 MSRHSSRTVYVGNLPGDIREREVEDLFMKYGHITHIDLKVPPRPPGYAFVEFEDVQDAED 86
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSS-GGSRGVSRRSDYRVLVTGLPS 119
AIRGRDGY+FDG+RLRVE AHGGR +SSS DRYSS+S+ G RGVSRRS+YRV+V GLPS
Sbjct: 87 AIRGRDGYDFDGHRLRVEAAHGGRGNSSSRDRYSSHSNGRGGRGVSRRSEYRVIVNGLPS 146
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRS 179
SASWQDLKDHMR+AGDVCFSQVF D G TGIVDYT+YDDMKYAI+KLD SEFRNAFS+S
Sbjct: 147 SASWQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSKS 206
Query: 180 YVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYSPRGKYSR 239
YVRVREYDSRR SRSP R P +SR RS S SRSRS SRS SRS SP+GK S+
Sbjct: 207 YVRVREYDSRRD-SRSPGRGPSHSRGRSYSRSRSRSRSHSRS-YSPGHSRSKSPKGKSSQ 264
Query: 240 RSPSLSPAR 248
RSP+ SPA+
Sbjct: 265 RSPAKSPAK 273
>gi|357516353|ref|XP_003628465.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355522487|gb|AET02941.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 326
Score = 313 bits (801), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 180/249 (72%), Positives = 200/249 (80%), Gaps = 3/249 (1%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS SSRT+YVGNLPGD R REVEDLF KYG I IDLK+PPRPPGYAF+EFED +DAED
Sbjct: 27 MSRHSSRTVYVGNLPGDIREREVEDLFMKYGHITHIDLKVPPRPPGYAFVEFEDVQDAED 86
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSS-GGSRGVSRRSDYRVLVTGLPS 119
AIRGRDGY+FDG+RLRVE AHGGR +SSS DRYSS+S+ G RGVSRRS+YRV+V GLPS
Sbjct: 87 AIRGRDGYDFDGHRLRVEAAHGGRGNSSSRDRYSSHSNGRGGRGVSRRSEYRVIVNGLPS 146
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRS 179
SASWQDLKDHMR+AGDVCFSQVF D G TGIVDYT+YDDMKYAI+KLD SEFRNAFS+S
Sbjct: 147 SASWQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSKS 206
Query: 180 YVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYSPRGKYSR 239
YVRVREYDSRR SRSP R P +SR RS S SRS SP+GK S+
Sbjct: 207 YVRVREYDSRRD-SRSPGRGPSHSRGRSYS-RSRSRSRSHSRSYSPGHSRSKSPKGKSSQ 264
Query: 240 RSPSLSPAR 248
RSP+ SPA+
Sbjct: 265 RSPAKSPAK 273
>gi|357511267|ref|XP_003625922.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355500937|gb|AES82140.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 401
Score = 312 bits (800), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 188/249 (75%), Positives = 208/249 (83%), Gaps = 3/249 (1%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS SSRT+YVGNLPGD R REVEDLF KYG I IDLK+PPRPPGYAF+EFED +DAED
Sbjct: 102 MSRHSSRTVYVGNLPGDIREREVEDLFMKYGHITHIDLKVPPRPPGYAFVEFEDVQDAED 161
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSS-GGSRGVSRRSDYRVLVTGLPS 119
AIRGRDGY+FDG+RLRVE AHGGR +SSS DRYSS+S+ G RGVSRRS+YRV+V GLPS
Sbjct: 162 AIRGRDGYDFDGHRLRVEAAHGGRGNSSSRDRYSSHSNGRGGRGVSRRSEYRVIVNGLPS 221
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRS 179
SASWQDLKDHMR+AGDVCFSQVF D G TGIVDYT+YDDMKYAI+KLD SEFRNAFS+S
Sbjct: 222 SASWQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSKS 281
Query: 180 YVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYSPRGKYSR 239
YVRVREYDSRR SRSP R P +SR RS S SRSRS SRS SRS SP+GK S+
Sbjct: 282 YVRVREYDSRRD-SRSPGRGPSHSRGRSYSRSRSRSRSHSRS-YSPGHSRSKSPKGKSSQ 339
Query: 240 RSPSLSPAR 248
RSP+ SPA+
Sbjct: 340 RSPAKSPAK 348
>gi|357511859|ref|XP_003626218.1| Arginine/serine-rich splicing factor [Medicago truncatula]
gi|355501233|gb|AES82436.1| Arginine/serine-rich splicing factor [Medicago truncatula]
Length = 296
Score = 312 bits (800), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 164/197 (83%), Positives = 180/197 (91%), Gaps = 2/197 (1%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS RSSRT+YVGNLPGD R+REVEDLFYK+GPIVDI+LKIPPRPPGYAF+EFED RDAED
Sbjct: 1 MSRRSSRTIYVGNLPGDIRLREVEDLFYKFGPIVDIELKIPPRPPGYAFVEFEDARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AIR RDGY FDG+RLRVELAHGGR +SSS+DR S S GSRGVS+ S+YRVLVTGLP S
Sbjct: 61 AIRYRDGYKFDGFRLRVELAHGGRGYSSSVDR-YSSYSSGSRGVSKHSEYRVLVTGLPPS 119
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSY 180
ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIV+YT+Y+DMKYAIRKLD SEFRNAFS +Y
Sbjct: 120 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVEYTNYEDMKYAIRKLDDSEFRNAFSWAY 179
Query: 181 VRVREYDSRRSYSRSPS 197
+RVREYD RR Y+RSPS
Sbjct: 180 IRVREYD-RRRYTRSPS 195
>gi|357516355|ref|XP_003628466.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355522488|gb|AET02942.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 329
Score = 311 bits (797), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 188/249 (75%), Positives = 208/249 (83%), Gaps = 3/249 (1%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS SSRT+YVGNLPGD R REVEDLF KYG I IDLK+PPRPPGYAF+EFED +DAED
Sbjct: 27 MSRHSSRTVYVGNLPGDIREREVEDLFMKYGHITHIDLKVPPRPPGYAFVEFEDVQDAED 86
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSS-GGSRGVSRRSDYRVLVTGLPS 119
AIRGRDGY+FDG+RLRVE AHGGR +SSS DRYSS+S+ G RGVSRRS+YRV+V GLPS
Sbjct: 87 AIRGRDGYDFDGHRLRVEAAHGGRGNSSSRDRYSSHSNGRGGRGVSRRSEYRVIVNGLPS 146
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRS 179
SASWQDLKDHMR+AGDVCFSQVF D G TGIVDYT+YDDMKYAI+KLD SEFRNAFS+S
Sbjct: 147 SASWQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSKS 206
Query: 180 YVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYSPRGKYSR 239
YVRVREYDSRR SRSP R P +SR RS S SRSRS SRS SRS SP+GK S+
Sbjct: 207 YVRVREYDSRRD-SRSPGRGPSHSRGRSYSRSRSRSRSHSRS-YSPGHSRSKSPKGKSSQ 264
Query: 240 RSPSLSPAR 248
RSP+ SPA+
Sbjct: 265 RSPAKSPAK 273
>gi|218188085|gb|EEC70512.1| hypothetical protein OsI_01613 [Oryza sativa Indica Group]
Length = 447
Score = 311 bits (796), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 168/236 (71%), Positives = 183/236 (77%), Gaps = 20/236 (8%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R+SRT+YVGNLPGD R REVEDLFYKYG I+DIDLKIPPRPPGYAF+EFED RDA+D
Sbjct: 190 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADD 249
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRD YNFDGYRLRVELAHGGR S S DR SYSSG GVSRRS+YRV+VTGLPSS
Sbjct: 250 AICGRDRYNFDGYRLRVELAHGGRGQSYSYDRPRSYSSGRRGGVSRRSEYRVMVTGLPSS 309
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSY 180
ASWQDLKDHMRRAGDVCFS V+R+ G GIVDYT+Y+DMKYAIRKLD SEFRNAFSR+Y
Sbjct: 310 ASWQDLKDHMRRAGDVCFSDVYREAGATVGIVDYTTYEDMKYAIRKLDDSEFRNAFSRAY 369
Query: 181 VRVREYDSR--------------------RSYSRSPSRSPYYSRSRSRSPYYSRSR 216
+RVREYD R +S SRSPS S SRSR+P S SR
Sbjct: 370 IRVREYDDRSRSRSRSYSRSRSYSRSRSPKSVSRSPSPVDERSISRSRTPVSSPSR 425
>gi|449436495|ref|XP_004136028.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
gi|449498497|ref|XP_004160553.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
Length = 309
Score = 310 bits (795), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 157/197 (79%), Positives = 170/197 (86%), Gaps = 1/197 (0%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSR+SRT+YVGNLPGD R +EVEDLFYKYG I IDLK+PPRPPGYAF+EFED DA+D
Sbjct: 1 MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRS-DYRVLVTGLPS 119
AIRGRDGY+FDG+RLRVELAHGGR HSSS DRYSS+ R DYRVLVTGLPS
Sbjct: 61 AIRGRDGYDFDGHRLRVELAHGGRGHSSSNDRYSSHGGSRGGRGVSRRSDYRVLVTGLPS 120
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRS 179
SASWQDLKDHMRRAGDVCFSQVFRD G TGIVDYT+YDDMKYAI+KLD SEFRNAFSR+
Sbjct: 121 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRA 180
Query: 180 YVRVREYDSRRSYSRSP 196
YVRVREYDS+R SRSP
Sbjct: 181 YVRVREYDSKRDLSRSP 197
>gi|255646543|gb|ACU23746.1| unknown [Glycine max]
Length = 310
Score = 307 bits (786), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 178/257 (69%), Positives = 200/257 (77%), Gaps = 6/257 (2%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS RSSRT+YVGNLPGD R REVEDLF KYG I IDLK+PPRPPGYAF+EFED +DAED
Sbjct: 1 MSRRSSRTVYVGNLPGDIREREVEDLFLKYGHITHIDLKVPPRPPGYAFVEFEDAQDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRS-DYRVLVTGLPS 119
AIRGRDGY+FDG+RLRVE AHGGR HSSS DR++S+S+G R +YRVLVTGLPS
Sbjct: 61 AIRGRDGYDFDGHRLRVEPAHGGRGHSSSKDRHNSHSNGRGGRGVSRRSEYRVLVTGLPS 120
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRS 179
SASWQDLKDHMR+AGDVCFSQVF D G TGIVDYT+YDDMKYAI+KLD SEFRNAFS+
Sbjct: 121 SASWQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSKG 180
Query: 180 YVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYSPRGKYSR 239
YVRVREYDSRR SRSPS P +SR RS RS+S SP+GK S+
Sbjct: 181 YVRVREYDSRRDSSRSPSHGPSHSRGRS-----YSRSRSRSHSYSRDRSQSKSPKGKSSQ 235
Query: 240 RSPSLSPARSASQRSPS 256
RSP+ SP +SQRSP+
Sbjct: 236 RSPAKSPKGKSSQRSPA 252
>gi|356572736|ref|XP_003554522.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Glycine max]
Length = 309
Score = 307 bits (786), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 178/257 (69%), Positives = 200/257 (77%), Gaps = 6/257 (2%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS RSSRT+YVGNLPGD R REVEDLF KYG I IDLK+PPRPPGYAF+EFED +DAED
Sbjct: 1 MSRRSSRTVYVGNLPGDIREREVEDLFLKYGHITHIDLKVPPRPPGYAFVEFEDAQDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRS-DYRVLVTGLPS 119
AIRGRDGY+FDG+RLRVE AHGGR HSSS DR++S+S+G R +YRVLVTGLPS
Sbjct: 61 AIRGRDGYDFDGHRLRVEPAHGGRGHSSSKDRHNSHSNGRGGRGVSRRSEYRVLVTGLPS 120
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRS 179
SASWQDLKDHMR+AGDVCFSQVF D G TGIVDYT+YDDMKYAI+KLD SEFRNAFS+
Sbjct: 121 SASWQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSKG 180
Query: 180 YVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYSPRGKYSR 239
YVRVREYDSRR SRSPS P +SR RS RS+S SP+GK S+
Sbjct: 181 YVRVREYDSRRDSSRSPSHGPSHSRGRS-----YSRSRSRSHSYSRDRSQSKSPKGKSSQ 235
Query: 240 RSPSLSPARSASQRSPS 256
RSP+ SP +SQRSP+
Sbjct: 236 RSPAKSPKGKSSQRSPA 252
>gi|224068334|ref|XP_002302710.1| predicted protein [Populus trichocarpa]
gi|222844436|gb|EEE81983.1| predicted protein [Populus trichocarpa]
Length = 252
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 160/207 (77%), Positives = 178/207 (85%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSR+SRTLYVGNLPGD R +EVEDLFYKYGP+ IDLKIPPRPPGYAF+EFE+ RDAED
Sbjct: 1 MSSRASRTLYVGNLPGDIREKEVEDLFYKYGPVAHIDLKIPPRPPGYAFVEFEEARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AIRGRDGY+FDG+RLRVELAHGGR HSSS S G G SRRS+YRV+VTGLPSS
Sbjct: 61 AIRGRDGYDFDGHRLRVELAHGGRGHSSSDRHSSYSGGRGRGGASRRSEYRVVVTGLPSS 120
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSY 180
ASWQDLKDHMRRAGDVCFSQVFRD G TGIVDYT+Y+DMKYAI+K+D SEFRNAFS++Y
Sbjct: 121 ASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYEDMKYAIKKIDDSEFRNAFSQAY 180
Query: 181 VRVREYDSRRSYSRSPSRSPYYSRSRS 207
VRVREYDS+R SRSP R +SR R+
Sbjct: 181 VRVREYDSKRDSSRSPGRDRSHSRGRN 207
>gi|147855944|emb|CAN80749.1| hypothetical protein VITISV_040486 [Vitis vinifera]
Length = 282
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 159/187 (85%), Positives = 170/187 (90%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSRSSRT+YVGNLPGD R REVEDLFYKYGPIVDIDLKIPPRPPGYAF+EFED RDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRDGYNFDG+RLRVELAHGGR SSS+D YSSYSS G+SR S+YRVLVTGLP S
Sbjct: 61 AIYGRDGYNFDGHRLRVELAHGGRGQSSSVDHYSSYSSSSRGGLSRHSEYRVLVTGLPYS 120
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSY 180
ASWQDLKDHMRRAGDVCFSQVFR RGGMTGIVDYT+YDDMKYAIRKLD S F+N FSR+Y
Sbjct: 121 ASWQDLKDHMRRAGDVCFSQVFRGRGGMTGIVDYTNYDDMKYAIRKLDDSLFKNQFSRAY 180
Query: 181 VRVREYD 187
+RVREY+
Sbjct: 181 IRVREYE 187
>gi|296089689|emb|CBI39508.3| unnamed protein product [Vitis vinifera]
Length = 249
Score = 303 bits (777), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 159/187 (85%), Positives = 170/187 (90%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSRSSRT+YVGNLPGD R REVEDLFYKYGPIVDIDLKIPPRPPGYAF+EFED RDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRDGYNFDG+RLRVELAHGGR SSS+D YSSYSS G+SR S+YRVLVTGLP S
Sbjct: 61 AIYGRDGYNFDGHRLRVELAHGGRGQSSSVDHYSSYSSSSRGGLSRHSEYRVLVTGLPYS 120
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSY 180
ASWQDLKDHMRRAGDVCFSQVFR RGGMTGIVDYT+YDDMKYAIRKLD S F+N FSR+Y
Sbjct: 121 ASWQDLKDHMRRAGDVCFSQVFRGRGGMTGIVDYTNYDDMKYAIRKLDDSLFKNQFSRAY 180
Query: 181 VRVREYD 187
+RVREY+
Sbjct: 181 IRVREYE 187
>gi|356574963|ref|XP_003555612.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Glycine max]
Length = 264
Score = 303 bits (775), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 158/188 (84%), Positives = 171/188 (90%), Gaps = 1/188 (0%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS RSSRT+YVGNLPGD R+REVEDLFYKYGPIVDIDLKIPPRPPGYAF+EFED RDAED
Sbjct: 1 MSGRSSRTIYVGNLPGDVRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRS-DYRVLVTGLPS 119
AI+ RDGYNFDG+RLRVELAHGGR +SSS+DRYSSYS G R DYRVLVTGLP
Sbjct: 61 AIQYRDGYNFDGFRLRVELAHGGRGYSSSVDRYSSYSGGSGSRGVSRRSDYRVLVTGLPP 120
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRS 179
SASWQDLKDHMR+AGDVCFSQVFR+RGGMTGIVDYT+YDDMKYAIRKLD SEFRNAFSR+
Sbjct: 121 SASWQDLKDHMRKAGDVCFSQVFRERGGMTGIVDYTNYDDMKYAIRKLDDSEFRNAFSRA 180
Query: 180 YVRVREYD 187
++RVREYD
Sbjct: 181 FIRVREYD 188
>gi|147853033|emb|CAN81258.1| hypothetical protein VITISV_000965 [Vitis vinifera]
Length = 720
Score = 303 bits (775), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 155/188 (82%), Positives = 168/188 (89%), Gaps = 1/188 (0%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSR+SRTLYVGNLPGD R REVEDLFYKYGPI IDLKIPPRPPGYAF+EFE+ RDAED
Sbjct: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEESRDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRS-DYRVLVTGLPS 119
AIRGRDGY+FDG+RLRVELAHGGR HSSS+DR+S S G RG + R +YRVLVTGLPS
Sbjct: 61 AIRGRDGYDFDGHRLRVELAHGGRGHSSSIDRHSHSSGRGGRGGASRRSEYRVLVTGLPS 120
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRS 179
SASWQDLKDHMRRAGDVCFSQVF D GG GIVDYT+YDDMK+AIRKLD SEFRNAFSR+
Sbjct: 121 SASWQDLKDHMRRAGDVCFSQVFHDGGGTVGIVDYTNYDDMKFAIRKLDDSEFRNAFSRA 180
Query: 180 YVRVREYD 187
YVRV+EYD
Sbjct: 181 YVRVKEYD 188
>gi|224123814|ref|XP_002330215.1| predicted protein [Populus trichocarpa]
gi|222871671|gb|EEF08802.1| predicted protein [Populus trichocarpa]
Length = 226
Score = 302 bits (774), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 156/186 (83%), Positives = 167/186 (89%), Gaps = 1/186 (0%)
Query: 3 SRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAI 62
SR+SRTLYVGNLPGD R+REVEDLFYKYGPIVDIDLKIPPRPPGYAF+EFED DA+ AI
Sbjct: 2 SRASRTLYVGNLPGDIRVREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDAHDAKYAI 61
Query: 63 RGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVS-RRSDYRVLVTGLPSSA 121
RG DGYNFD RLRVELAHGGRRHSS +DRYSSYS + SDYRVLV+GLPSSA
Sbjct: 62 RGLDGYNFDACRLRVELAHGGRRHSSPVDRYSSYSGSSGSRGPPKHSDYRVLVSGLPSSA 121
Query: 122 SWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYV 181
SWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYT+YDDMKYAI+KLD SEFRNAFSR+Y+
Sbjct: 122 SWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRAYI 181
Query: 182 RVREYD 187
RVREYD
Sbjct: 182 RVREYD 187
>gi|225450797|ref|XP_002283865.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Vitis vinifera]
Length = 288
Score = 301 bits (772), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 159/187 (85%), Positives = 170/187 (90%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSRSSRT+YVGNLPGD R REVEDLFYKYGPIVDIDLKIPPRPPGYAF+EFED RDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRDGYNFDG+RLRVELAHGGR SSS+D YSSYSS G+SR S+YRVLVTGLP S
Sbjct: 61 AIYGRDGYNFDGHRLRVELAHGGRGQSSSVDHYSSYSSSSRGGLSRHSEYRVLVTGLPYS 120
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSY 180
ASWQDLKDHMRRAGDVCFSQVFR RGGMTGIVDYT+YDDMKYAIRKLD S F+N FSR+Y
Sbjct: 121 ASWQDLKDHMRRAGDVCFSQVFRGRGGMTGIVDYTNYDDMKYAIRKLDDSLFKNQFSRAY 180
Query: 181 VRVREYD 187
+RVREY+
Sbjct: 181 IRVREYE 187
>gi|302791860|ref|XP_002977696.1| hypothetical protein SELMODRAFT_107678 [Selaginella moellendorffii]
gi|300154399|gb|EFJ21034.1| hypothetical protein SELMODRAFT_107678 [Selaginella moellendorffii]
Length = 298
Score = 301 bits (770), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 149/184 (80%), Positives = 166/184 (90%), Gaps = 4/184 (2%)
Query: 3 SRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAI 62
SRSSRT+YVGNLPGD R RE++DLF+KYGPIVDIDLK+PPRPPGY F+EFED RDAEDAI
Sbjct: 2 SRSSRTIYVGNLPGDVREREIDDLFHKYGPIVDIDLKLPPRPPGYCFIEFEDVRDAEDAI 61
Query: 63 RGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSS-GGSRGVSRRSDYRVLVTGLPSSA 121
RGRDGYNFDGYRLRVE+AHGGR SS DRYSSY GGS VSRRS+YRV++TGLPSSA
Sbjct: 62 RGRDGYNFDGYRLRVEIAHGGRGPPSS-DRYSSYGGRGGS--VSRRSEYRVIITGLPSSA 118
Query: 122 SWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYV 181
SWQDLKDHMRRAGDVCF+QVFR+ G TGIVD+T+YDDMKYAI+KLD SEFRN FSRSY+
Sbjct: 119 SWQDLKDHMRRAGDVCFAQVFREGNGTTGIVDFTNYDDMKYAIKKLDDSEFRNPFSRSYI 178
Query: 182 RVRE 185
RV+E
Sbjct: 179 RVKE 182
>gi|225437350|ref|XP_002265998.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 1 [Vitis
vinifera]
gi|359480272|ref|XP_003632425.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 2 [Vitis
vinifera]
Length = 296
Score = 300 bits (769), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 155/188 (82%), Positives = 168/188 (89%), Gaps = 1/188 (0%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSR+SRTLYVGNLPGD R REVEDLFYKYGPI IDLKIPPRPPGYAF+EFE+ RDAED
Sbjct: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEESRDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRS-DYRVLVTGLPS 119
AIRGRDGY+FDG+RLRVELAHGGR HSSS+DR+S S G RG + R +YRVLVTGLPS
Sbjct: 61 AIRGRDGYDFDGHRLRVELAHGGRGHSSSIDRHSHSSGRGGRGGASRRSEYRVLVTGLPS 120
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRS 179
SASWQDLKDHMRRAGDVCFSQVF D GG GIVDYT+YDDMK+AIRKLD SEFRNAFSR+
Sbjct: 121 SASWQDLKDHMRRAGDVCFSQVFHDGGGTVGIVDYTNYDDMKFAIRKLDDSEFRNAFSRA 180
Query: 180 YVRVREYD 187
YVRV+EYD
Sbjct: 181 YVRVKEYD 188
>gi|297849206|ref|XP_002892484.1| hypothetical protein ARALYDRAFT_470995 [Arabidopsis lyrata subsp.
lyrata]
gi|297338326|gb|EFH68743.1| hypothetical protein ARALYDRAFT_470995 [Arabidopsis lyrata subsp.
lyrata]
Length = 265
Score = 300 bits (767), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 161/197 (81%), Positives = 180/197 (91%), Gaps = 2/197 (1%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSR +RT+YVGNLPGD RMREVEDLFYKYGPIVDIDLKIPPRPPGYAF+EFED RDA+D
Sbjct: 1 MSSRWNRTIYVGNLPGDIRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRDGY+FDG RLRVE+AHGGRR SSS+DRYSS + GSR SRRS YRVLVTGLP S
Sbjct: 61 AIYGRDGYDFDGCRLRVEIAHGGRRGSSSVDRYSSSYT-GSRAPSRRSAYRVLVTGLPPS 119
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSY 180
ASWQDLKDHMR+AGDVCFS+VFRDRG M+G+VDY++YDDMKYAIRKLD +EFRNAFSR+Y
Sbjct: 120 ASWQDLKDHMRKAGDVCFSEVFRDRGRMSGVVDYSNYDDMKYAIRKLDDTEFRNAFSRAY 179
Query: 181 VRVREYDSRRSYSRSPS 197
+RVREY+S RS SRSP+
Sbjct: 180 IRVREYES-RSVSRSPN 195
>gi|357131986|ref|XP_003567614.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Brachypodium
distachyon]
Length = 262
Score = 299 bits (766), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 150/188 (79%), Positives = 163/188 (86%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M +S T+YVGNLPGD R REVEDLFYKYG IVDIDLKIPPRPPGYAF+EFED RDA+D
Sbjct: 1 MGRTNSCTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRDGYNFDGYRLRVELAHGGR S +R SYSSG GVSRRS+YRVLV GLPSS
Sbjct: 61 AIYGRDGYNFDGYRLRVELAHGGRGQSYQYERPRSYSSGRRGGVSRRSEYRVLVDGLPSS 120
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSY 180
ASWQDLKDHMRRAGDVCFS V+R+ G + GIVDYT+YDDMKYAIRKLD +EFRNAFSRSY
Sbjct: 121 ASWQDLKDHMRRAGDVCFSDVYREAGAIVGIVDYTNYDDMKYAIRKLDGTEFRNAFSRSY 180
Query: 181 VRVREYDS 188
+RVREYD+
Sbjct: 181 IRVREYDA 188
>gi|326495758|dbj|BAJ85975.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 255
Score = 299 bits (766), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 149/188 (79%), Positives = 165/188 (87%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M R+S T+YVGNLPGD R REVEDLFYKYG IVDIDLKIPPRPPGYAF+EFED RDA+D
Sbjct: 1 MGRRNSCTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRDGY+FDGYRLRVELAHGG+ S S DR SS+SSG GVSRRS+YRV+V GLPSS
Sbjct: 61 AIYGRDGYDFDGYRLRVELAHGGKAQSYSYDRPSSFSSGRRGGVSRRSEYRVMVDGLPSS 120
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSY 180
ASWQDLKDHMRRAGDVCFS V+R+ G GIVDYT+YDDMKYAIRKLD +EFRNAFSR+Y
Sbjct: 121 ASWQDLKDHMRRAGDVCFSDVYREAGATVGIVDYTNYDDMKYAIRKLDGTEFRNAFSRAY 180
Query: 181 VRVREYDS 188
+RVREYD+
Sbjct: 181 IRVREYDA 188
>gi|255542752|ref|XP_002512439.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223548400|gb|EEF49891.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 444
Score = 299 bits (766), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 191/306 (62%), Positives = 221/306 (72%), Gaps = 31/306 (10%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSS +SRTLYVGNLPGD R REV+DLFYKYG IV +DL+ PPR PGYAF++FED +AE+
Sbjct: 1 MSSCASRTLYVGNLPGDIRWREVKDLFYKYGLIVRVDLRNPPRTPGYAFVQFEDACNAEE 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMD---------RYSSYSSGGS--RGVSRRSD 109
AIRGRDGYNF+G RLRVELA+GGR+HS+ R+ + SG S G S+ SD
Sbjct: 61 AIRGRDGYNFNGCRLRVELAYGGRKHSTPGHGGRKHSFPGRHYNTCSGISENHGPSKHSD 120
Query: 110 YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDR 169
+RVLVTGLPSSASWQDLKDHMR+AGDVCFS+VF RGG TGIVDY +YDDMK+AI+KLD
Sbjct: 121 HRVLVTGLPSSASWQDLKDHMRQAGDVCFSRVFPGRGGKTGIVDYKNYDDMKHAIKKLDD 180
Query: 170 SEFRNAFSRSYVRVREYDSRRSYSRSPSR-SPYYSRSRSRSPYYSRSRSPSRSWSYSPRS 228
SEFRNAFSRSYVRVR+ DSRRSYS+SPS + S+SRSRS S+SRS SRS + S RS
Sbjct: 181 SEFRNAFSRSYVRVRKDDSRRSYSQSPSHGTRDRSKSRSRSRSGSQSRSRSRSRNCSERS 240
Query: 229 RSYSPRGKYSRRSPSLSPARSASQRSPSGSPPRS----------------FSRSGSF--- 269
RS SP KYS RS S+SP RS S S +G PRS F R G
Sbjct: 241 RSKSPGAKYSHRSLSVSPGRSVSPHSHAGLSPRSSSPFIDGLDHYSGAHEFMRVGKIWLC 300
Query: 270 ARTWGV 275
A TWG+
Sbjct: 301 AATWGL 306
>gi|226504020|ref|NP_001150424.1| pre-mRNA-splicing factor SF2 [Zea mays]
gi|195639150|gb|ACG39043.1| pre-mRNA-splicing factor SF2 [Zea mays]
Length = 263
Score = 299 bits (765), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 171/228 (75%), Positives = 187/228 (82%), Gaps = 8/228 (3%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R+SRT+YVGNLPGD R REVEDLFYKYG I+DIDLKIPPRPPGYAF+EFED RDA+D
Sbjct: 4 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADD 63
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRDGYNFDGYRLRVELAHGGR S S DR SSYSS GVSRRSD+RV+VTGLPSS
Sbjct: 64 AIYGRDGYNFDGYRLRVELAHGGRGQSYSYDRSSSYSSACRGGVSRRSDFRVMVTGLPSS 123
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSY 180
ASWQDLKDHMRRAGDVCFS V+R+ G GIVDYT+YDDMKYAIRKLD S+FRNAFSR+Y
Sbjct: 124 ASWQDLKDHMRRAGDVCFSDVYREAGETIGIVDYTNYDDMKYAIRKLDDSQFRNAFSRAY 183
Query: 181 VRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRS 228
+RVREYD+R S S SR+P YSRSRSP +S S SP S
Sbjct: 184 IRVREYDARSRSRSR-------SHSYSRTPSYSRSRSP-KSVSQSPSS 223
>gi|297743877|emb|CBI36847.3| unnamed protein product [Vitis vinifera]
Length = 264
Score = 298 bits (763), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 155/188 (82%), Positives = 168/188 (89%), Gaps = 1/188 (0%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSR+SRTLYVGNLPGD R REVEDLFYKYGPI IDLKIPPRPPGYAF+EFE+ RDAED
Sbjct: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEESRDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRS-DYRVLVTGLPS 119
AIRGRDGY+FDG+RLRVELAHGGR HSSS+DR+S S G RG + R +YRVLVTGLPS
Sbjct: 61 AIRGRDGYDFDGHRLRVELAHGGRGHSSSIDRHSHSSGRGGRGGASRRSEYRVLVTGLPS 120
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRS 179
SASWQDLKDHMRRAGDVCFSQVF D GG GIVDYT+YDDMK+AIRKLD SEFRNAFSR+
Sbjct: 121 SASWQDLKDHMRRAGDVCFSQVFHDGGGTVGIVDYTNYDDMKFAIRKLDDSEFRNAFSRA 180
Query: 180 YVRVREYD 187
YVRV+EYD
Sbjct: 181 YVRVKEYD 188
>gi|302795628|ref|XP_002979577.1| hypothetical protein SELMODRAFT_36388 [Selaginella moellendorffii]
gi|300152825|gb|EFJ19466.1| hypothetical protein SELMODRAFT_36388 [Selaginella moellendorffii]
Length = 236
Score = 297 bits (761), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 148/183 (80%), Positives = 165/183 (90%), Gaps = 4/183 (2%)
Query: 4 RSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIR 63
RSSRT+YVGNLPGD R RE++DLF+KYGPIVDIDLK+PPRPPGY F+EFED RDAEDAIR
Sbjct: 1 RSSRTIYVGNLPGDVREREIDDLFHKYGPIVDIDLKLPPRPPGYCFIEFEDVRDAEDAIR 60
Query: 64 GRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSS-GGSRGVSRRSDYRVLVTGLPSSAS 122
GRDGYNFDGYRLRVE+AHGGR SS DRYSSY GGS VSRRS+YRV++TGLPSSAS
Sbjct: 61 GRDGYNFDGYRLRVEIAHGGRGPPSS-DRYSSYGGRGGS--VSRRSEYRVIITGLPSSAS 117
Query: 123 WQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVR 182
WQDLKDHMRRAGDVCF+QVFR+ G TGIVD+T+YDDMKYAI+KLD SEFRN FSRSY+R
Sbjct: 118 WQDLKDHMRRAGDVCFAQVFREGNGTTGIVDFTNYDDMKYAIKKLDDSEFRNPFSRSYIR 177
Query: 183 VRE 185
V+E
Sbjct: 178 VKE 180
>gi|168043399|ref|XP_001774172.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674440|gb|EDQ60948.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 240
Score = 296 bits (758), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 145/183 (79%), Positives = 163/183 (89%), Gaps = 1/183 (0%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSR+SRT+YVGNLPGD R RE+ED+FYKYG IVDIDLK+PPRPPGY FLEFED RDAED
Sbjct: 1 MSSRASRTIYVGNLPGDVREREIEDIFYKYGRIVDIDLKLPPRPPGYCFLEFEDARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AIRGRDGYNFDG RLRVE+AHGGR ++DR ++ S G + GVSRRS+YRV+VTGLPSS
Sbjct: 61 AIRGRDGYNFDGNRLRVEIAHGGRGPPPAVDRSAAESGGRAGGVSRRSEYRVMVTGLPSS 120
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSY 180
ASWQDLKDHMRRAGDVCF+QVFRD G M GIVD+T+YDDMKYAIRKLD SEFRN FSRS+
Sbjct: 121 ASWQDLKDHMRRAGDVCFAQVFRDAGTM-GIVDFTNYDDMKYAIRKLDDSEFRNPFSRSF 179
Query: 181 VRV 183
+RV
Sbjct: 180 IRV 182
>gi|414877279|tpg|DAA54410.1| TPA: hypothetical protein ZEAMMB73_543160 [Zea mays]
Length = 272
Score = 295 bits (755), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 153/188 (81%), Positives = 167/188 (88%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R+SRT+YVGNLPGD R REVEDLFYKYG I+DIDLKIPPRPPGYAF+EFED RDA+D
Sbjct: 4 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADD 63
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRDGYNFDGYRLRVELAHGGR S S DR SSYSS GVSRRSD+RV+VTGLPSS
Sbjct: 64 AIYGRDGYNFDGYRLRVELAHGGRGQSYSYDRSSSYSSACRGGVSRRSDFRVMVTGLPSS 123
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSY 180
ASWQDLKDHMRRAGDVCFS V+R+ G GIVDYT+YDDMKYAIRKLD S+FRNAFSR+Y
Sbjct: 124 ASWQDLKDHMRRAGDVCFSDVYREAGETIGIVDYTNYDDMKYAIRKLDDSQFRNAFSRAY 183
Query: 181 VRVREYDS 188
+RVREYD+
Sbjct: 184 IRVREYDA 191
>gi|33146854|dbj|BAC79849.1| putative pre-mRNA splicing factor SF2 [Oryza sativa Japonica Group]
Length = 362
Score = 295 bits (755), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 146/187 (78%), Positives = 164/187 (87%), Gaps = 2/187 (1%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SRT+YVGNLPGD R REVEDLFYKYG IVDIDLKIPPRPPG+AF+EFED RDAED
Sbjct: 67 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAED 126
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AIRGRDGYNFDG RLRVELAHGGR +SSS + +S G GVSR ++YRVLVTGLPSS
Sbjct: 127 AIRGRDGYNFDGNRLRVELAHGGRGNSSSFN--NSGGGGRRGGVSRHTEYRVLVTGLPSS 184
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSY 180
ASWQDLKDHMR AGDVC+S+V+R+ GG GIVDYT+YDDMKYAIRKLD SEF+NAFS++Y
Sbjct: 185 ASWQDLKDHMRNAGDVCYSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDSEFKNAFSKAY 244
Query: 181 VRVREYD 187
+RV+EYD
Sbjct: 245 IRVKEYD 251
>gi|414877278|tpg|DAA54409.1| TPA: hypothetical protein ZEAMMB73_543160 [Zea mays]
Length = 254
Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 153/188 (81%), Positives = 167/188 (88%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R+SRT+YVGNLPGD R REVEDLFYKYG I+DIDLKIPPRPPGYAF+EFED RDA+D
Sbjct: 4 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADD 63
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRDGYNFDGYRLRVELAHGGR S S DR SSYSS GVSRRSD+RV+VTGLPSS
Sbjct: 64 AIYGRDGYNFDGYRLRVELAHGGRGQSYSYDRSSSYSSACRGGVSRRSDFRVMVTGLPSS 123
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSY 180
ASWQDLKDHMRRAGDVCFS V+R+ G GIVDYT+YDDMKYAIRKLD S+FRNAFSR+Y
Sbjct: 124 ASWQDLKDHMRRAGDVCFSDVYREAGETIGIVDYTNYDDMKYAIRKLDDSQFRNAFSRAY 183
Query: 181 VRVREYDS 188
+RVREYD+
Sbjct: 184 IRVREYDA 191
>gi|218196647|gb|EEC79074.1| hypothetical protein OsI_19658 [Oryza sativa Indica Group]
Length = 328
Score = 295 bits (754), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 149/190 (78%), Positives = 167/190 (87%), Gaps = 2/190 (1%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R+SRT+YVGNLPGD R REVEDLFYKYG IVDIDLKIPPRPPGYAF+EFED RDA+D
Sbjct: 24 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQD 83
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GR+GY+FDG+RLRVELAHGGR S DR SSYSS G RG ++R+DYRV+VTGLPSS
Sbjct: 84 AIYGRNGYDFDGHRLRVELAHGGR--GPSFDRSSSYSSAGRRGAAKRTDYRVMVTGLPSS 141
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSY 180
ASWQDLKDHMRRAGDVCFS V+R+ G GIVDYT+Y+DMK AIRKLD SEFRNAFSR+Y
Sbjct: 142 ASWQDLKDHMRRAGDVCFSDVYREGGATIGIVDYTNYEDMKQAIRKLDDSEFRNAFSRAY 201
Query: 181 VRVREYDSRR 190
+RVREYDS +
Sbjct: 202 IRVREYDSAK 211
>gi|222637670|gb|EEE67802.1| hypothetical protein OsJ_25544 [Oryza sativa Japonica Group]
Length = 338
Score = 295 bits (754), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 146/189 (77%), Positives = 165/189 (87%), Gaps = 2/189 (1%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SRT+YVGNLPGD R REVEDLFYKYG IVDIDLKIPPRPPG+AF+EFED RDAED
Sbjct: 67 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAED 126
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AIRGRDGYNFDG RLRVELAHGGR +SSS + +S G GVSR ++YRVLVTGLPSS
Sbjct: 127 AIRGRDGYNFDGNRLRVELAHGGRGNSSSFN--NSGGGGRRGGVSRHTEYRVLVTGLPSS 184
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSY 180
ASWQDLKDHMR AGDVC+S+V+R+ GG GIVDYT+YDDMKYAIRKLD SEF+NAFS++Y
Sbjct: 185 ASWQDLKDHMRNAGDVCYSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDSEFKNAFSKAY 244
Query: 181 VRVREYDSR 189
+RV+EYD +
Sbjct: 245 IRVKEYDGK 253
>gi|42561847|ref|NP_172386.3| splicing factor, arginine/serine-rich 1/9 [Arabidopsis thaliana]
gi|4775270|emb|CAB42557.1| SF2/ASF-like splicing modulator Srp30 [Arabidopsis thaliana]
gi|23297699|gb|AAN13011.1| putative SF2/ASF splicing modulator Srp30 [Arabidopsis thaliana]
gi|332190279|gb|AEE28400.1| splicing factor, arginine/serine-rich 1/9 [Arabidopsis thaliana]
Length = 268
Score = 294 bits (753), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 155/196 (79%), Positives = 172/196 (87%), Gaps = 2/196 (1%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSR +RT+YVGNLPGD R EVEDLFYKYGPIVDIDLKIPPRPPGYAF+EFED RDA+D
Sbjct: 1 MSSRWNRTIYVGNLPGDIRKCEVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRDGY+FDG RLRVE+AHGGRR S S+DRYSS S SRRSDYRVLVTGLP S
Sbjct: 61 AIYGRDGYDFDGCRLRVEIAHGGRRFSPSVDRYSSSYSASRAP-SRRSDYRVLVTGLPPS 119
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSY 180
ASWQDLKDHMR+AGDVCFS+VF DR GM+G+VDY++YDDMKYAIRKLD +EFRNAFS +Y
Sbjct: 120 ASWQDLKDHMRKAGDVCFSEVFPDRKGMSGVVDYSNYDDMKYAIRKLDATEFRNAFSSAY 179
Query: 181 VRVREYDSRRSYSRSP 196
+RVREY+S RS SRSP
Sbjct: 180 IRVREYES-RSVSRSP 194
>gi|194696448|gb|ACF82308.1| unknown [Zea mays]
gi|414877280|tpg|DAA54411.1| TPA: ASF/SF2-like pre-mRNA splicing factor SRP30 [Zea mays]
Length = 263
Score = 294 bits (752), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 153/188 (81%), Positives = 167/188 (88%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R+SRT+YVGNLPGD R REVEDLFYKYG I+DIDLKIPPRPPGYAF+EFED RDA+D
Sbjct: 4 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADD 63
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRDGYNFDGYRLRVELAHGGR S S DR SSYSS GVSRRSD+RV+VTGLPSS
Sbjct: 64 AIYGRDGYNFDGYRLRVELAHGGRGQSYSYDRSSSYSSACRGGVSRRSDFRVMVTGLPSS 123
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSY 180
ASWQDLKDHMRRAGDVCFS V+R+ G GIVDYT+YDDMKYAIRKLD S+FRNAFSR+Y
Sbjct: 124 ASWQDLKDHMRRAGDVCFSDVYREAGETIGIVDYTNYDDMKYAIRKLDDSQFRNAFSRAY 183
Query: 181 VRVREYDS 188
+RVREYD+
Sbjct: 184 IRVREYDA 191
>gi|3249109|gb|AAC24092.1| Contains similarity to pre-mRNA splicing factor (SF2), P33 subunit
gb|M72709 from Homo sapiens. ESTs gb|T42588 and
gb|R65514 come from this gene [Arabidopsis thaliana]
Length = 237
Score = 294 bits (752), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 155/196 (79%), Positives = 172/196 (87%), Gaps = 2/196 (1%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSR +RT+YVGNLPGD R EVEDLFYKYGPIVDIDLKIPPRPPGYAF+EFED RDA+D
Sbjct: 1 MSSRWNRTIYVGNLPGDIRKCEVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRDGY+FDG RLRVE+AHGGRR S S+DRYSS S SRRSDYRVLVTGLP S
Sbjct: 61 AIYGRDGYDFDGCRLRVEIAHGGRRFSPSVDRYSSSYSASRAP-SRRSDYRVLVTGLPPS 119
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSY 180
ASWQDLKDHMR+AGDVCFS+VF DR GM+G+VDY++YDDMKYAIRKLD +EFRNAFS +Y
Sbjct: 120 ASWQDLKDHMRKAGDVCFSEVFPDRKGMSGVVDYSNYDDMKYAIRKLDATEFRNAFSSAY 179
Query: 181 VRVREYDSRRSYSRSP 196
+RVREY+S RS SRSP
Sbjct: 180 IRVREYES-RSVSRSP 194
>gi|148908052|gb|ABR17145.1| unknown [Picea sitchensis]
Length = 263
Score = 294 bits (752), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 143/191 (74%), Positives = 162/191 (84%), Gaps = 5/191 (2%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSR +RTLYVGNLPGD R E+EDLFYKYG I+D+DLK+PPRPPGY F+EFED RDAED
Sbjct: 1 MSSRMTRTLYVGNLPGDVREGEIEDLFYKYGRIIDVDLKVPPRPPGYCFIEFEDARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRG-----VSRRSDYRVLVT 115
AIRGRDGYNFDG+R+RVE AHGGRR SSS+ R SSYSS V+R +DYRVLVT
Sbjct: 61 AIRGRDGYNFDGHRIRVEFAHGGRRTSSSLGRPSSYSSIAGGRGGRGGVTRHTDYRVLVT 120
Query: 116 GLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNA 175
GLPSSASWQDLKDHMRRAGDVC+++VFRD G G VDYT+ +DMKYAIRKLD SEFRNA
Sbjct: 121 GLPSSASWQDLKDHMRRAGDVCYAEVFRDSNGTRGTVDYTNLEDMKYAIRKLDDSEFRNA 180
Query: 176 FSRSYVRVREY 186
FSRSY++V+EY
Sbjct: 181 FSRSYIQVKEY 191
>gi|115474019|ref|NP_001060608.1| Os07g0673500 [Oryza sativa Japonica Group]
gi|113612144|dbj|BAF22522.1| Os07g0673500 [Oryza sativa Japonica Group]
Length = 296
Score = 293 bits (751), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 146/187 (78%), Positives = 164/187 (87%), Gaps = 2/187 (1%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SRT+YVGNLPGD R REVEDLFYKYG IVDIDLKIPPRPPG+AF+EFED RDAED
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AIRGRDGYNFDG RLRVELAHGGR +SSS + +S G GVSR ++YRVLVTGLPSS
Sbjct: 61 AIRGRDGYNFDGNRLRVELAHGGRGNSSSFN--NSGGGGRRGGVSRHTEYRVLVTGLPSS 118
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSY 180
ASWQDLKDHMR AGDVC+S+V+R+ GG GIVDYT+YDDMKYAIRKLD SEF+NAFS++Y
Sbjct: 119 ASWQDLKDHMRNAGDVCYSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDSEFKNAFSKAY 178
Query: 181 VRVREYD 187
+RV+EYD
Sbjct: 179 IRVKEYD 185
>gi|52140009|gb|AAU29331.1| ASF/SF2-like pre-mRNA splicing factor SRP30 [Zea mays]
gi|414877275|tpg|DAA54406.1| TPA: ASF/SF2-like pre-mRNA splicing factor SRP30 isoform 1 [Zea
mays]
gi|414877276|tpg|DAA54407.1| TPA: ASF/SF2-like pre-mRNA splicing factor SRP30 isoform 2 [Zea
mays]
Length = 260
Score = 293 bits (751), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 153/188 (81%), Positives = 167/188 (88%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R+SRT+YVGNLPGD R REVEDLFYKYG I+DIDLKIPPRPPGYAF+EFED RDA+D
Sbjct: 1 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRDGYNFDGYRLRVELAHGGR S S DR SSYSS GVSRRSD+RV+VTGLPSS
Sbjct: 61 AIYGRDGYNFDGYRLRVELAHGGRGQSYSYDRSSSYSSACRGGVSRRSDFRVMVTGLPSS 120
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSY 180
ASWQDLKDHMRRAGDVCFS V+R+ G GIVDYT+YDDMKYAIRKLD S+FRNAFSR+Y
Sbjct: 121 ASWQDLKDHMRRAGDVCFSDVYREAGETIGIVDYTNYDDMKYAIRKLDDSQFRNAFSRAY 180
Query: 181 VRVREYDS 188
+RVREYD+
Sbjct: 181 IRVREYDA 188
>gi|115463447|ref|NP_001055323.1| Os05g0364600 [Oryza sativa Japonica Group]
gi|113578874|dbj|BAF17237.1| Os05g0364600 [Oryza sativa Japonica Group]
Length = 294
Score = 293 bits (751), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 149/188 (79%), Positives = 165/188 (87%), Gaps = 2/188 (1%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R+SRT+YVGNLPGD R REVEDLFYKYG IVDIDLKIPPRPPGYAF+EFED RDA+D
Sbjct: 1 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQD 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GR GY+FDG+RLRVELAHGGR S DR SSYSS G RG ++R+DYRV+VTGLPSS
Sbjct: 61 AIYGRHGYDFDGHRLRVELAHGGR--GPSFDRSSSYSSAGRRGAAKRTDYRVMVTGLPSS 118
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSY 180
ASWQDLKDHMRRAGDVCFS V+R+ G GIVDYT+Y+DMK AIRKLD SEFRNAFSR+Y
Sbjct: 119 ASWQDLKDHMRRAGDVCFSDVYREGGATIGIVDYTNYEDMKQAIRKLDDSEFRNAFSRAY 178
Query: 181 VRVREYDS 188
+RVREYDS
Sbjct: 179 IRVREYDS 186
>gi|79582138|ref|NP_683288.2| splicing factor, arginine/serine-rich 1/9 [Arabidopsis thaliana]
gi|4775271|emb|CAB42558.1| SF2/ASF-like splicing modulator Srp30, variant 1 [Arabidopsis
thaliana]
gi|332190280|gb|AEE28401.1| splicing factor, arginine/serine-rich 1/9 [Arabidopsis thaliana]
Length = 256
Score = 293 bits (751), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 155/196 (79%), Positives = 172/196 (87%), Gaps = 2/196 (1%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSR +RT+YVGNLPGD R EVEDLFYKYGPIVDIDLKIPPRPPGYAF+EFED RDA+D
Sbjct: 1 MSSRWNRTIYVGNLPGDIRKCEVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRDGY+FDG RLRVE+AHGGRR S S+DRYSS S SRRSDYRVLVTGLP S
Sbjct: 61 AIYGRDGYDFDGCRLRVEIAHGGRRFSPSVDRYSSSYSASRAP-SRRSDYRVLVTGLPPS 119
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSY 180
ASWQDLKDHMR+AGDVCFS+VF DR GM+G+VDY++YDDMKYAIRKLD +EFRNAFS +Y
Sbjct: 120 ASWQDLKDHMRKAGDVCFSEVFPDRKGMSGVVDYSNYDDMKYAIRKLDATEFRNAFSSAY 179
Query: 181 VRVREYDSRRSYSRSP 196
+RVREY+S RS SRSP
Sbjct: 180 IRVREYES-RSVSRSP 194
>gi|222631305|gb|EEE63437.1| hypothetical protein OsJ_18250 [Oryza sativa Japonica Group]
Length = 305
Score = 293 bits (751), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 149/188 (79%), Positives = 165/188 (87%), Gaps = 2/188 (1%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R+SRT+YVGNLPGD R REVEDLFYKYG IVDIDLKIPPRPPGYAF+EFED RDA+D
Sbjct: 1 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQD 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GR GY+FDG+RLRVELAHGGR S DR SSYSS G RG ++R+DYRV+VTGLPSS
Sbjct: 61 AIYGRHGYDFDGHRLRVELAHGGR--GPSFDRSSSYSSAGRRGAAKRTDYRVMVTGLPSS 118
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSY 180
ASWQDLKDHMRRAGDVCFS V+R+ G GIVDYT+Y+DMK AIRKLD SEFRNAFSR+Y
Sbjct: 119 ASWQDLKDHMRRAGDVCFSDVYREGGATIGIVDYTNYEDMKQAIRKLDDSEFRNAFSRAY 178
Query: 181 VRVREYDS 188
+RVREYDS
Sbjct: 179 IRVREYDS 186
>gi|224032703|gb|ACN35427.1| unknown [Zea mays]
gi|414877277|tpg|DAA54408.1| TPA: hypothetical protein ZEAMMB73_543160 [Zea mays]
Length = 234
Score = 293 bits (749), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 153/188 (81%), Positives = 167/188 (88%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R+SRT+YVGNLPGD R REVEDLFYKYG I+DIDLKIPPRPPGYAF+EFED RDA+D
Sbjct: 1 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRDGYNFDGYRLRVELAHGGR S S DR SSYSS GVSRRSD+RV+VTGLPSS
Sbjct: 61 AIYGRDGYNFDGYRLRVELAHGGRGQSYSYDRSSSYSSACRGGVSRRSDFRVMVTGLPSS 120
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSY 180
ASWQDLKDHMRRAGDVCFS V+R+ G GIVDYT+YDDMKYAIRKLD S+FRNAFSR+Y
Sbjct: 121 ASWQDLKDHMRRAGDVCFSDVYREAGETIGIVDYTNYDDMKYAIRKLDDSQFRNAFSRAY 180
Query: 181 VRVREYDS 188
+RVREYD+
Sbjct: 181 IRVREYDA 188
>gi|414877281|tpg|DAA54412.1| TPA: ASF/SF2-like pre-mRNA splicing factor SRP30 [Zea mays]
Length = 244
Score = 293 bits (749), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 153/188 (81%), Positives = 167/188 (88%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R+SRT+YVGNLPGD R REVEDLFYKYG I+DIDLKIPPRPPGYAF+EFED RDA+D
Sbjct: 4 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADD 63
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRDGYNFDGYRLRVELAHGGR S S DR SSYSS GVSRRSD+RV+VTGLPSS
Sbjct: 64 AIYGRDGYNFDGYRLRVELAHGGRGQSYSYDRSSSYSSACRGGVSRRSDFRVMVTGLPSS 123
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSY 180
ASWQDLKDHMRRAGDVCFS V+R+ G GIVDYT+YDDMKYAIRKLD S+FRNAFSR+Y
Sbjct: 124 ASWQDLKDHMRRAGDVCFSDVYREAGETIGIVDYTNYDDMKYAIRKLDDSQFRNAFSRAY 183
Query: 181 VRVREYDS 188
+RVREYD+
Sbjct: 184 IRVREYDA 191
>gi|448878368|gb|AGE46147.1| arginine/serine-rich splicing factor SR30 transcript VI [Sorghum
bicolor]
Length = 237
Score = 292 bits (748), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 171/236 (72%), Positives = 193/236 (81%), Gaps = 10/236 (4%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M+ R+ T+YVGNLPGD R REV+DLFYKYG IV+IDLKIPPRPPG+AF+EFED DAED
Sbjct: 1 MTRRNGCTIYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDPHDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRDGYNFDG+RLRVELAHGGR SS DR SSYSS G RG S+RSDYRV+VTGLPSS
Sbjct: 61 AIYGRDGYNFDGHRLRVELAHGGR-GPSSFDRSSSYSSAGQRGASKRSDYRVMVTGLPSS 119
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSY 180
ASWQDLKDHMRRAGDVCF+ V+R+ G GI DYT+Y+DMK+AIRKLD SEFRNAFSR+Y
Sbjct: 120 ASWQDLKDHMRRAGDVCFTDVYREAGATIGIADYTNYEDMKHAIRKLDDSEFRNAFSRTY 179
Query: 181 VRVREYDSRRSYSRSPSRSPYYSRSRSRSPYY------SRSRSPSRSWSYSPRSRS 230
+RVREYD+RR SRS S+SP +RS SRSP S SRSP+RS S PRS S
Sbjct: 180 IRVREYDARR--SRSQSKSPVKARSPSRSPPVSPPRDKSISRSPARSKSL-PRSCS 232
>gi|52140010|gb|AAU29332.1| ASF/SF2-like pre-mRNA splicing factor SRP30' [Zea mays]
Length = 241
Score = 292 bits (747), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 153/188 (81%), Positives = 167/188 (88%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R+SRT+YVGNLPGD R REVEDLFYKYG I+DIDLKIPPRPPGYAF+EFED RDA+D
Sbjct: 1 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRDGYNFDGYRLRVELAHGGR S S DR SSYSS GVSRRSD+RV+VTGLPSS
Sbjct: 61 AIYGRDGYNFDGYRLRVELAHGGRGQSYSYDRSSSYSSACRGGVSRRSDFRVMVTGLPSS 120
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSY 180
ASWQDLKDHMRRAGDVCFS V+R+ G GIVDYT+YDDMKYAIRKLD S+FRNAFSR+Y
Sbjct: 121 ASWQDLKDHMRRAGDVCFSDVYREAGETIGIVDYTNYDDMKYAIRKLDDSQFRNAFSRAY 180
Query: 181 VRVREYDS 188
+RVREYD+
Sbjct: 181 IRVREYDA 188
>gi|448878370|gb|AGE46148.1| arginine/serine-rich splicing factor SR27 transcript I [Sorghum
bicolor]
Length = 230
Score = 292 bits (747), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 153/188 (81%), Positives = 167/188 (88%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R+SRT+YVGNLPGD R REVEDLFYKYG I+DIDLKIPPRPPGYAF+EFED RDA+D
Sbjct: 1 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRDGYNFDGYRLRVELAHGGR S S DR SSYSS GVSRRSD+RV+VTGLPSS
Sbjct: 61 AIYGRDGYNFDGYRLRVELAHGGRGQSYSYDRSSSYSSARRGGVSRRSDFRVMVTGLPSS 120
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSY 180
ASWQDLKDHMRRAGDVCFS V+R+ G GIVDYT+YDDMKYAIRKLD S+FRNAFSR+Y
Sbjct: 121 ASWQDLKDHMRRAGDVCFSDVYREAGETIGIVDYTNYDDMKYAIRKLDDSQFRNAFSRAY 180
Query: 181 VRVREYDS 188
+RVREYD+
Sbjct: 181 IRVREYDA 188
>gi|215741122|dbj|BAG97617.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 247
Score = 291 bits (746), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 146/187 (78%), Positives = 164/187 (87%), Gaps = 2/187 (1%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SRT+YVGNLPGD R REVEDLFYKYG IVDIDLKIPPRPPG+AF+EFED RDAED
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AIRGRDGYNFDG RLRVELAHGGR +SSS + +S G GVSR ++YRVLVTGLPSS
Sbjct: 61 AIRGRDGYNFDGNRLRVELAHGGRGNSSSFN--NSGGGGRRGGVSRHTEYRVLVTGLPSS 118
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSY 180
ASWQDLKDHMR AGDVC+S+V+R+ GG GIVDYT+YDDMKYAIRKLD SEF+NAFS++Y
Sbjct: 119 ASWQDLKDHMRNAGDVCYSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDSEFKNAFSKAY 178
Query: 181 VRVREYD 187
+RV+EYD
Sbjct: 179 IRVKEYD 185
>gi|30678395|ref|NP_850934.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|22135918|gb|AAM91541.1| SF2/ASF-like splicing modulator Srp30, putative [Arabidopsis
thaliana]
gi|30023782|gb|AAP13424.1| At1g02840 [Arabidopsis thaliana]
gi|332189357|gb|AEE27478.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
Length = 285
Score = 291 bits (744), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 170/268 (63%), Positives = 192/268 (71%), Gaps = 15/268 (5%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSRSSRT+YVGNLPGD R REVEDLF KYGP+V IDLK+PPRPPGYAF+EF+D RDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV---------SRRSDYR 111
AI GRDGY+FDG+RLRVELAHGGRR S + G SRRS++R
Sbjct: 61 AIHGRDGYDFDGHRLRVELAHGGRRSSDDTRGSFNGGGRGGGRGRGDGGSRGPSRRSEFR 120
Query: 112 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSE 171
VLVTGLPSSASWQDLKDHMR+ GDVCFSQV+RD G TG+VDYT Y+DMKYA++KLD +E
Sbjct: 121 VLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKLDDTE 180
Query: 172 FRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSY 231
FRNAFS YVRVREYDSR+ SRSP RS S+S RSRS
Sbjct: 181 FRNAFSNGYVRVREYDSRKD-----SRSPSRGRSYSKS-RSRSRGRSVSRSRSRSRSRSR 234
Query: 232 SPRGKYSRRSPSLSPARSASQRSPSGSP 259
SP+ K SRRSP+ S +RS RS S SP
Sbjct: 235 SPKAKSSRRSPAKSTSRSPGPRSKSRSP 262
>gi|356505580|ref|XP_003521568.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor SF2-like
[Glycine max]
Length = 326
Score = 290 bits (742), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 146/187 (78%), Positives = 161/187 (86%), Gaps = 1/187 (0%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS RSSRT+YVGNLPGD R REVEDLF KYG I IDLK+PPRPPGYAF+EFED +DAED
Sbjct: 1 MSRRSSRTVYVGNLPGDIREREVEDLFLKYGHITHIDLKVPPRPPGYAFVEFEDAQDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRS-DYRVLVTGLPS 119
AIRGRDGY+FDG+RLRVE AHGGR HSSS DRY+S+S+G R +YRVLV+GLPS
Sbjct: 61 AIRGRDGYDFDGHRLRVEPAHGGRGHSSSRDRYNSHSNGRGGRGVSRRSEYRVLVSGLPS 120
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRS 179
SASWQDLKDHMR+AGDVCFSQVF D G TGIVDYT+YDDMKYAI+KLD SEFRNAFS+
Sbjct: 121 SASWQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSKG 180
Query: 180 YVRVREY 186
YVRVREY
Sbjct: 181 YVRVREY 187
>gi|2443473|gb|AAB71386.1| ASF/SF2 homolog [Arabidopsis thaliana]
Length = 272
Score = 290 bits (741), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 167/268 (62%), Positives = 188/268 (70%), Gaps = 15/268 (5%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSRSSRT+YVGNLPGD R REVEDLF KYGP+V IDLK+PPRPPGYAF+EF+D RDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV---------SRRSDYR 111
AI GRDGY+FDG+RLRVELAHGGRR S + G SRRS++R
Sbjct: 61 AIHGRDGYDFDGHRLRVELAHGGRRSSDDTRGSFNGGGRGGGRGRGDGGSRGPSRRSEFR 120
Query: 112 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSE 171
VLVTGLPSSASWQDLKDHMR+ GDVCFSQV+RD G TG+VDYT Y+DMKYA++KLD +E
Sbjct: 121 VLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKLDDTE 180
Query: 172 FRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSY 231
FRNAFS YVRVREYDSR+ SRSPS RSRS
Sbjct: 181 FRNAFSNGYVRVREYDSRKD-SRSPS-----RGRSYSKSRSRSRGRSVSRSRSRSRSRSR 234
Query: 232 SPRGKYSRRSPSLSPARSASQRSPSGSP 259
SP+ K SRRSP+ S +RS RS S SP
Sbjct: 235 SPKAKSSRRSPAKSTSRSPGPRSKSRSP 262
>gi|30678391|ref|NP_850933.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|30678398|ref|NP_563665.3| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|3929368|sp|O22315.1|SFRS1_ARATH RecName: Full=Pre-mRNA-splicing factor SF2; AltName: Full=SR1
protein
gi|6056417|gb|AAF02881.1|AC009525_15 alternative splicing factor SF2a [Arabidopsis thaliana]
gi|2443472|gb|AAB71385.1| ASF/SF2 homolog [Arabidopsis thaliana]
gi|21554051|gb|AAM63132.1| SF2/ASF-like splicing modulator Srp30, putative [Arabidopsis
thaliana]
gi|26451794|dbj|BAC42991.1| putative ribonucleoprotein SF-2 [Arabidopsis thaliana]
gi|332189356|gb|AEE27477.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|332189358|gb|AEE27479.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
Length = 303
Score = 290 bits (741), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 146/205 (71%), Positives = 164/205 (80%), Gaps = 10/205 (4%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSRSSRT+YVGNLPGD R REVEDLF KYGP+V IDLK+PPRPPGYAF+EF+D RDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV---------SRRSDYR 111
AI GRDGY+FDG+RLRVELAHGGRR S + G SRRS++R
Sbjct: 61 AIHGRDGYDFDGHRLRVELAHGGRRSSDDTRGSFNGGGRGGGRGRGDGGSRGPSRRSEFR 120
Query: 112 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSE 171
VLVTGLPSSASWQDLKDHMR+ GDVCFSQV+RD G TG+VDYT Y+DMKYA++KLD +E
Sbjct: 121 VLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKLDDTE 180
Query: 172 FRNAFSRSYVRVREYDSRRSYSRSP 196
FRNAFS YVRVREYDSR+ SRSP
Sbjct: 181 FRNAFSNGYVRVREYDSRKD-SRSP 204
>gi|108708090|gb|ABF95885.1| Pre-mRNA splicing factor SF2, putative, expressed [Oryza sativa
Japonica Group]
Length = 236
Score = 290 bits (741), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 147/190 (77%), Positives = 166/190 (87%), Gaps = 1/190 (0%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SRT+YVGNLPGD R REVEDLFYKYG IVDIDLKIPPRPPGYAF+EFED RDAE+
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAEE 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHS-SSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPS 119
A GRDGYNFDG+RLRVE AHGGR + SS DR S++ GG RGVSR S+YRVLVTGLPS
Sbjct: 61 ACAGRDGYNFDGHRLRVEPAHGGRGNGGSSFDRPSNFGGGGRRGVSRHSEYRVLVTGLPS 120
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRS 179
SASWQDLKDHMR+AGDVCFS+V+R+ GG GIVDYT+YDDMKYAI+KLD SEFRNAFS+
Sbjct: 121 SASWQDLKDHMRKAGDVCFSEVYREGGGTVGIVDYTNYDDMKYAIKKLDDSEFRNAFSKG 180
Query: 180 YVRVREYDSR 189
++RV+EYD +
Sbjct: 181 HIRVKEYDGK 190
>gi|326490421|dbj|BAJ84874.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326522680|dbj|BAJ88386.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 286
Score = 289 bits (740), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 142/186 (76%), Positives = 162/186 (87%), Gaps = 1/186 (0%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SRT+YVGNLPGD R REVEDLFYKYG IV+IDLK+PPRPPG+AF+EFED RDAED
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI+GRDGYNFDG RLRVELAHGGR +SSS+ S G GVSR ++YRVLVTGLPSS
Sbjct: 61 AIQGRDGYNFDGNRLRVELAHGGRANSSSLPN-SHGGGGRRGGVSRHTEYRVLVTGLPSS 119
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSY 180
ASWQDLKDHMR+AGDVCFS+V+R+ GG GIVDYT+YDDMKYAIRKLD +EF+NAFSR+
Sbjct: 120 ASWQDLKDHMRKAGDVCFSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDTEFKNAFSRAP 179
Query: 181 VRVREY 186
+RV+EY
Sbjct: 180 IRVKEY 185
>gi|5815239|gb|AAD52613.1| splicing factor SR1E [Arabidopsis thaliana]
Length = 270
Score = 289 bits (740), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 170/272 (62%), Positives = 192/272 (70%), Gaps = 19/272 (6%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSRSSRT+YVGNLPGD R REVEDLF KYGP+V IDLK+PPRPPGYAF+EF+D RDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV-------------SRR 107
AI GRDGY+FDG+RLRVELAHGGRR S + G SRR
Sbjct: 61 AIHGRDGYDFDGHRLRVELAHGGRRSSDDTRGSFNGGGRGGGRGRGDGRGDGGSRGPSRR 120
Query: 108 SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKL 167
S++RVLVTGLPSSASWQDLKDHMR+ GDVCFSQV+RD G TG+VDYT Y+DMKYA++KL
Sbjct: 121 SEFRVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKL 180
Query: 168 DRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPR 227
D +EFRNAFS YVRVREYDSR+ SRSP RS S+S R
Sbjct: 181 DDTEFRNAFSNGYVRVREYDSRKD-----SRSPSRGRSYSKS-RSRSRGRSVSRSRSRSR 234
Query: 228 SRSYSPRGKYSRRSPSLSPARSASQRSPSGSP 259
SRS SP+ K SRRSP+ S +RS RS S SP
Sbjct: 235 SRSRSPKAKSSRRSPAKSTSRSPGPRSKSRSP 266
>gi|255564164|ref|XP_002523079.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223537641|gb|EEF39264.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 292
Score = 289 bits (740), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 154/187 (82%), Positives = 167/187 (89%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSR+SRTLYVGNLPGD R REVEDLFYKYGPI IDLKIPPRPPGYAF+EFE+ RDAED
Sbjct: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AIRGRDGY+FDG++LRVELAHGGR HSSS S G RGVSRRS+YRVLVTGLPSS
Sbjct: 61 AIRGRDGYDFDGHQLRVELAHGGRGHSSSDRHSSHSGGGRGRGVSRRSEYRVLVTGLPSS 120
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSY 180
ASWQDLKDHMRRAGDVCFSQVFRD G TGIVDYT+Y+DMK+AI+KLD SEFRNAFSR+Y
Sbjct: 121 ASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYEDMKHAIKKLDDSEFRNAFSRAY 180
Query: 181 VRVREYD 187
VRV+EYD
Sbjct: 181 VRVKEYD 187
>gi|5815236|gb|AAD52610.1| splicing factor SR1B [Arabidopsis thaliana]
Length = 289
Score = 289 bits (740), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 170/272 (62%), Positives = 192/272 (70%), Gaps = 19/272 (6%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSRSSRT+YVGNLPGD R REVEDLF KYGP+V IDLK+PPRPPGYAF+EF+D RDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV-------------SRR 107
AI GRDGY+FDG+RLRVELAHGGRR S + G SRR
Sbjct: 61 AIHGRDGYDFDGHRLRVELAHGGRRSSDDTRGSFNGGGRGGGRGRGDGRGDGGSRGPSRR 120
Query: 108 SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKL 167
S++RVLVTGLPSSASWQDLKDHMR+ GDVCFSQV+RD G TG+VDYT Y+DMKYA++KL
Sbjct: 121 SEFRVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKL 180
Query: 168 DRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPR 227
D +EFRNAFS YVRVREYDSR+ SRSP RS S+S R
Sbjct: 181 DDTEFRNAFSNGYVRVREYDSRKD-----SRSPSRGRSYSKS-RSRSRGRSVSRSRSRSR 234
Query: 228 SRSYSPRGKYSRRSPSLSPARSASQRSPSGSP 259
SRS SP+ K SRRSP+ S +RS RS S SP
Sbjct: 235 SRSRSPKAKSSRRSPAKSTSRSPGPRSKSRSP 266
>gi|5815237|gb|AAD52611.1| splicing factor SR1C [Arabidopsis thaliana]
Length = 276
Score = 288 bits (737), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 167/272 (61%), Positives = 188/272 (69%), Gaps = 19/272 (6%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSRSSRT+YVGNLPGD R REVEDLF KYGP+V IDLK+PPRPPGYAF+EF+D RDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV-------------SRR 107
AI GRDGY+FDG+RLRVELAHGGRR S + G SRR
Sbjct: 61 AIHGRDGYDFDGHRLRVELAHGGRRSSDDTRGSFNGGGRGGGRGRGDGRGDGGSRGPSRR 120
Query: 108 SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKL 167
S++RVLVTGLPSSASWQDLKDHMR+ GDVCFSQV+RD G TG+VDYT Y+DMKYA++KL
Sbjct: 121 SEFRVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKL 180
Query: 168 DRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPR 227
D +EFRNAFS YVRVREYDSR+ SRSPS R
Sbjct: 181 DDTEFRNAFSNGYVRVREYDSRKD-SRSPS-----RGRSYSKSRSRSRGRSVSRSRSRSR 234
Query: 228 SRSYSPRGKYSRRSPSLSPARSASQRSPSGSP 259
SRS SP+ K SRRSP+ S +RS RS S SP
Sbjct: 235 SRSRSPKAKSSRRSPAKSTSRSPGPRSKSRSP 266
>gi|5815235|gb|AAD52609.1|AF173640_1 splicing factor SR1 [Arabidopsis thaliana]
Length = 307
Score = 288 bits (737), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 146/209 (69%), Positives = 164/209 (78%), Gaps = 14/209 (6%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSRSSRT+YVGNLPGD R REVEDLF KYGP+V IDLK+PPRPPGYAF+EF+D RDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV-------------SRR 107
AI GRDGY+FDG+RLRVELAHGGRR S + G SRR
Sbjct: 61 AIHGRDGYDFDGHRLRVELAHGGRRSSDDTRGSFNGGGRGGGRGRGDGRGDGGSRGPSRR 120
Query: 108 SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKL 167
S++RVLVTGLPSSASWQDLKDHMR+ GDVCFSQV+RD G TG+VDYT Y+DMKYA++KL
Sbjct: 121 SEFRVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKL 180
Query: 168 DRSEFRNAFSRSYVRVREYDSRRSYSRSP 196
D +EFRNAFS YVRVREYDSR+ SRSP
Sbjct: 181 DDTEFRNAFSNGYVRVREYDSRKD-SRSP 208
>gi|52140012|gb|AAU29333.1| ASF/SF2-like pre-mRNA splicing factor SRP31 [Zea mays]
gi|194698470|gb|ACF83319.1| unknown [Zea mays]
gi|413944987|gb|AFW77636.1| pre-mRNA-splicing factor SF2 [Zea mays]
Length = 276
Score = 288 bits (736), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 147/188 (78%), Positives = 166/188 (88%), Gaps = 1/188 (0%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M+ R+ T+YVGNLPGD R REV+DLFYKYG IV+IDLKIPPRPPG+AF+EFED RDAED
Sbjct: 1 MTRRNGCTIYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRDGYNFDG+RLRVELAHGGR +SS DR SSYSS G RG S+RSDYRV+VTGLPSS
Sbjct: 61 AIYGRDGYNFDGHRLRVELAHGGR-GTSSFDRSSSYSSAGQRGASKRSDYRVMVTGLPSS 119
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSY 180
ASWQDLKDHMRRAGDVCF+ V+R+ G GI DYT+Y+DMK+AIRKLD SEFRNAFSR+Y
Sbjct: 120 ASWQDLKDHMRRAGDVCFTDVYREAGATIGIADYTNYEDMKHAIRKLDDSEFRNAFSRTY 179
Query: 181 VRVREYDS 188
VRVREYD+
Sbjct: 180 VRVREYDA 187
>gi|242040955|ref|XP_002467872.1| hypothetical protein SORBIDRAFT_01g035680 [Sorghum bicolor]
gi|241921726|gb|EER94870.1| hypothetical protein SORBIDRAFT_01g035680 [Sorghum bicolor]
gi|448878354|gb|AGE46140.1| arginine/serine-rich splicing factor SR32 transcript I [Sorghum
bicolor]
Length = 286
Score = 288 bits (736), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 146/193 (75%), Positives = 165/193 (85%), Gaps = 3/193 (1%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SRT+YVGNLPGD R REVEDLFYKYG IVDIDLK+PPRPPGYAF+EFED RDAED
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKVPPRPPGYAFVEFEDARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMD---RYSSYSSGGSRGVSRRSDYRVLVTGL 117
AI GRDGYNFDG+RLRVE AHGGR ++SS D + G RGVSR S+YRVLVTGL
Sbjct: 61 AIAGRDGYNFDGHRLRVEAAHGGRGNTSSYDRSSGFGGGGGGARRGVSRHSEYRVLVTGL 120
Query: 118 PSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFS 177
PSSASWQDLKDHMR+AGDVCFS+V+R+ GG GIVDYT+YDDMKYAI+KLD +EFRNAF
Sbjct: 121 PSSASWQDLKDHMRKAGDVCFSEVYREGGGTVGIVDYTNYDDMKYAIKKLDDTEFRNAFG 180
Query: 178 RSYVRVREYDSRR 190
R+Y+RV+EYD +R
Sbjct: 181 RAYIRVKEYDGKR 193
>gi|68037673|gb|AAY84884.1| alternative splicing regulator [Triticum aestivum]
Length = 284
Score = 287 bits (734), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 142/186 (76%), Positives = 161/186 (86%), Gaps = 1/186 (0%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SRT+YVGNLPGD R REVEDLFYKYG IV+IDLK+PPRPPG+AF+EFED RDAED
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRDGYNFDG RLRVELAHGGR +SSS+ S G GVSR ++YRVLVTGLPSS
Sbjct: 61 AIHGRDGYNFDGNRLRVELAHGGRANSSSLPN-SYGGGGRRGGVSRHTEYRVLVTGLPSS 119
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSY 180
ASWQDLKDHMR+AGDVCFS+V+R+ GG GIVDYT+YDDMKYAIRKLD +EF+NAFSR+
Sbjct: 120 ASWQDLKDHMRKAGDVCFSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDTEFKNAFSRAP 179
Query: 181 VRVREY 186
+RV+EY
Sbjct: 180 IRVKEY 185
>gi|115452963|ref|NP_001050082.1| Os03g0344100 [Oryza sativa Japonica Group]
gi|113548553|dbj|BAF11996.1| Os03g0344100 [Oryza sativa Japonica Group]
Length = 264
Score = 286 bits (733), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 147/188 (78%), Positives = 165/188 (87%), Gaps = 1/188 (0%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SRT+YVGNLPGD R REVEDLFYKYG IVDIDLKIPPRPPGYAF+EFED RDAE+
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAEE 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRH-SSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPS 119
A GRDGYNFDG+RLRVE AHGGR + SS DR S++ GG RGVSR S+YRVLVTGLPS
Sbjct: 61 ACAGRDGYNFDGHRLRVEPAHGGRGNGGSSFDRPSNFGGGGRRGVSRHSEYRVLVTGLPS 120
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRS 179
SASWQDLKDHMR+AGDVCFS+V+R+ GG GIVDYT+YDDMKYAI+KLD SEFRNAFS+
Sbjct: 121 SASWQDLKDHMRKAGDVCFSEVYREGGGTVGIVDYTNYDDMKYAIKKLDDSEFRNAFSKG 180
Query: 180 YVRVREYD 187
++RV+EYD
Sbjct: 181 HIRVKEYD 188
>gi|168009612|ref|XP_001757499.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691193|gb|EDQ77556.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 262
Score = 286 bits (733), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 146/197 (74%), Positives = 161/197 (81%), Gaps = 14/197 (7%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSR+SRT+YVGNLPGD R RE+EDLFYKYG IVDIDLK+PPRPPGY F+EFED RDAED
Sbjct: 1 MSSRASRTIYVGNLPGDVREREIEDLFYKYGRIVDIDLKLPPRPPGYCFIEFEDGRDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSY-------------SSGGSRGVSRR 107
AIRGRDGYNFDG RLRVE+AHGGR ++DRYS Y G + GVSRR
Sbjct: 61 AIRGRDGYNFDGNRLRVEIAHGGRGPPPAVDRYSIYSSGGRGGGGSAADCGGRAGGVSRR 120
Query: 108 SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD-RGGMTGIVDYTSYDDMKYAIRK 166
S+YRV VTGLPSSASWQDLKDHMRRAGDVCF+QVFRD G GIVD+T+YDDMKYAIRK
Sbjct: 121 SEYRVTVTGLPSSASWQDLKDHMRRAGDVCFAQVFRDGTSGTMGIVDFTNYDDMKYAIRK 180
Query: 167 LDRSEFRNAFSRSYVRV 183
LD SEFRN FSRS++RV
Sbjct: 181 LDDSEFRNPFSRSFIRV 197
>gi|448878356|gb|AGE46141.1| arginine/serine-rich splicing factor SR32 transcript II [Sorghum
bicolor]
Length = 322
Score = 286 bits (732), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 146/193 (75%), Positives = 165/193 (85%), Gaps = 3/193 (1%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SRT+YVGNLPGD R REVEDLFYKYG IVDIDLK+PPRPPGYAF+EFED RDAED
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKVPPRPPGYAFVEFEDARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMD---RYSSYSSGGSRGVSRRSDYRVLVTGL 117
AI GRDGYNFDG+RLRVE AHGGR ++SS D + G RGVSR S+YRVLVTGL
Sbjct: 61 AIAGRDGYNFDGHRLRVEAAHGGRGNTSSYDRSSGFGGGGGGARRGVSRHSEYRVLVTGL 120
Query: 118 PSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFS 177
PSSASWQDLKDHMR+AGDVCFS+V+R+ GG GIVDYT+YDDMKYAI+KLD +EFRNAF
Sbjct: 121 PSSASWQDLKDHMRKAGDVCFSEVYREGGGTVGIVDYTNYDDMKYAIKKLDDTEFRNAFG 180
Query: 178 RSYVRVREYDSRR 190
R+Y+RV+EYD +R
Sbjct: 181 RAYIRVKEYDGKR 193
>gi|52140015|gb|AAU29336.1| ASF/SF2-like pre-mRNA splicing factor SRP31''' [Zea mays]
gi|413944988|gb|AFW77637.1| ASF/SF2-like pre-mRNA splicing factor SRP31 [Zea mays]
Length = 264
Score = 286 bits (732), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 147/188 (78%), Positives = 166/188 (88%), Gaps = 1/188 (0%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M+ R+ T+YVGNLPGD R REV+DLFYKYG IV+IDLKIPPRPPG+AF+EFED RDAED
Sbjct: 1 MTRRNGCTIYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRDGYNFDG+RLRVELAHGGR +SS DR SSYSS G RG S+RSDYRV+VTGLPSS
Sbjct: 61 AIYGRDGYNFDGHRLRVELAHGGR-GTSSFDRSSSYSSAGQRGASKRSDYRVMVTGLPSS 119
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSY 180
ASWQDLKDHMRRAGDVCF+ V+R+ G GI DYT+Y+DMK+AIRKLD SEFRNAFSR+Y
Sbjct: 120 ASWQDLKDHMRRAGDVCFTDVYREAGATIGIADYTNYEDMKHAIRKLDDSEFRNAFSRTY 179
Query: 181 VRVREYDS 188
VRVREYD+
Sbjct: 180 VRVREYDA 187
>gi|219363191|ref|NP_001137034.1| uncharacterized protein LOC100217203 [Zea mays]
gi|52140005|gb|AAU29328.1| ASF/SF2-like pre-mRNA splicing factor SRP32 [Zea mays]
gi|194693886|gb|ACF81027.1| unknown [Zea mays]
gi|194698082|gb|ACF83125.1| unknown [Zea mays]
gi|413955774|gb|AFW88423.1| ASF/SF2-like pre-mRNA splicing factor SRP32 isoform 1 [Zea mays]
gi|413955775|gb|AFW88424.1| ASF/SF2-like pre-mRNA splicing factor SRP32 isoform 2 [Zea mays]
Length = 285
Score = 286 bits (732), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 144/192 (75%), Positives = 164/192 (85%), Gaps = 2/192 (1%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SRT+YVGNLPGD R REVEDLFYKYG IVDIDLK+PPRPPGYAF+EFED RDAE+
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGKIVDIDLKVPPRPPGYAFVEFEDPRDAEE 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMD--RYSSYSSGGSRGVSRRSDYRVLVTGLP 118
AI GRDGYNFDG+RLRVE AHGGR ++SS D G RGVSR S+YRVLVTGLP
Sbjct: 61 AIAGRDGYNFDGHRLRVEAAHGGRGNASSHDRSSGFGGGGGARRGVSRHSEYRVLVTGLP 120
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSR 178
SSASWQDLKDHMR+AGDVCFS+V+R+ GG GIVDYT+YDDMKYAI+KLD +EFRNAF R
Sbjct: 121 SSASWQDLKDHMRKAGDVCFSEVYREGGGTVGIVDYTNYDDMKYAIKKLDDTEFRNAFGR 180
Query: 179 SYVRVREYDSRR 190
+Y+RV+EY+ +R
Sbjct: 181 AYIRVKEYNGKR 192
>gi|52140013|gb|AAU29334.1| ASF/SF2-like pre-mRNA splicing factor SRP31' [Zea mays]
gi|413944989|gb|AFW77638.1| ASF/SF2-like pre-mRNA splicing factor SRP31 [Zea mays]
Length = 253
Score = 286 bits (731), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 147/188 (78%), Positives = 166/188 (88%), Gaps = 1/188 (0%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M+ R+ T+YVGNLPGD R REV+DLFYKYG IV+IDLKIPPRPPG+AF+EFED RDAED
Sbjct: 1 MTRRNGCTIYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRDGYNFDG+RLRVELAHGGR +SS DR SSYSS G RG S+RSDYRV+VTGLPSS
Sbjct: 61 AIYGRDGYNFDGHRLRVELAHGGR-GTSSFDRSSSYSSAGQRGASKRSDYRVMVTGLPSS 119
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSY 180
ASWQDLKDHMRRAGDVCF+ V+R+ G GI DYT+Y+DMK+AIRKLD SEFRNAFSR+Y
Sbjct: 120 ASWQDLKDHMRRAGDVCFTDVYREAGATIGIADYTNYEDMKHAIRKLDDSEFRNAFSRTY 179
Query: 181 VRVREYDS 188
VRVREYD+
Sbjct: 180 VRVREYDA 187
>gi|357121520|ref|XP_003562467.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Brachypodium
distachyon]
Length = 288
Score = 286 bits (731), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 143/189 (75%), Positives = 160/189 (84%), Gaps = 3/189 (1%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SRT+YVGNLPGD R REVEDLFYKYG IV+IDLK+PPRPPG+AF+EFED RDAED
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDR---YSSYSSGGSRGVSRRSDYRVLVTGL 117
AI GRDGYNFDG RLRVELAHGGR +SSS+ G GVSR ++YRVLVTGL
Sbjct: 61 AIHGRDGYNFDGNRLRVELAHGGRANSSSLPNSYGGGGGGGGRRGGVSRHTEYRVLVTGL 120
Query: 118 PSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFS 177
PSSASWQDLKDHMR+AGDVCFS+V+R+ G TGIVDYT+YDDMKYAIRKLD SEFRNAFS
Sbjct: 121 PSSASWQDLKDHMRKAGDVCFSEVYREGDGTTGIVDYTNYDDMKYAIRKLDDSEFRNAFS 180
Query: 178 RSYVRVREY 186
R+ +RV+EY
Sbjct: 181 RAPIRVKEY 189
>gi|413955773|gb|AFW88422.1| ASF/SF2-like pre-mRNA splicing factor SRP32 [Zea mays]
Length = 283
Score = 286 bits (731), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 142/192 (73%), Positives = 163/192 (84%), Gaps = 2/192 (1%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SRT+YVGNLPGD R REVEDLFYKYG IVDIDLK+PPRPPGYAF+EFED RDAE+
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGKIVDIDLKVPPRPPGYAFVEFEDPRDAEE 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSR--RSDYRVLVTGLP 118
AI GRDGYNFDG+RLRVE AHGGR ++SS DR S + GG S+YRVLVTGLP
Sbjct: 61 AIAGRDGYNFDGHRLRVEAAHGGRGNASSHDRSSGFGGGGGARRGVSRHSEYRVLVTGLP 120
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSR 178
SSASWQDLKDHMR+AGDVCFS+V+R+ GG GIVDYT+YDDMKYAI+KLD +EFRNAF R
Sbjct: 121 SSASWQDLKDHMRKAGDVCFSEVYREGGGTVGIVDYTNYDDMKYAIKKLDDTEFRNAFGR 180
Query: 179 SYVRVREYDSRR 190
+Y+RV+EY+ +R
Sbjct: 181 AYIRVKEYNGKR 192
>gi|294461096|gb|ADE76115.1| unknown [Picea sitchensis]
Length = 298
Score = 286 bits (731), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 139/192 (72%), Positives = 162/192 (84%), Gaps = 4/192 (2%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M SRS+R LYVGNLP D R R++ED+F+KYGP+V IDLK PPRPPGY F+EFE+ RDAED
Sbjct: 1 MGSRSNRILYVGNLPVDFRERDIEDIFHKYGPVVKIDLKFPPRPPGYCFIEFENARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSR---RSDYRVLVTGL 117
AIRGRDGY+ DG+RLRVELAHGGR + S+DRYSS+SSGG R R DYRV ++GL
Sbjct: 61 AIRGRDGYDIDGHRLRVELAHGGR-GALSVDRYSSFSSGGGRRNGRLQSHCDYRVTISGL 119
Query: 118 PSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFS 177
PSSASWQDLKDHMRRAGDV F+QVFRD G TG+VDYT+YDDMKYAIRKLD +EF+N FS
Sbjct: 120 PSSASWQDLKDHMRRAGDVTFAQVFRDSNGTTGVVDYTNYDDMKYAIRKLDDTEFKNPFS 179
Query: 178 RSYVRVREYDSR 189
RSY+RV+EY S+
Sbjct: 180 RSYIRVKEYGSK 191
>gi|297843082|ref|XP_002889422.1| hypothetical protein ARALYDRAFT_311385 [Arabidopsis lyrata subsp.
lyrata]
gi|297335264|gb|EFH65681.1| hypothetical protein ARALYDRAFT_311385 [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 285 bits (730), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 162/274 (59%), Positives = 184/274 (67%), Gaps = 15/274 (5%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSRSSRT+YVGNLPGD R REVEDLF KYGP+V IDLK+PPRPPGYAF+EF+D RDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV-------------SRR 107
AI+GRDGY+FDG+RLRVELAHGGRR S + G SRR
Sbjct: 61 AIQGRDGYDFDGHRLRVELAHGGRRSSDDTRGSFNGGGRGGGRGRGDGRGDGGSRGPSRR 120
Query: 108 SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKL 167
S++RVLVTGLPSSASWQDLKDHMR+ GDVCFSQV+RD G TG+VDYT Y+DMKYA++KL
Sbjct: 121 SEFRVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDGRGTTGVVDYTCYEDMKYAVKKL 180
Query: 168 DRSEFRNAFSRSYVRVREYDSRRS--YSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYS 225
D +EFRNAFS YVRVREYDSR+
Sbjct: 181 DDTEFRNAFSHGYVRVREYDSRKDSRSPSRGRSYSRSRSRSRSRGRSLSRSRSRSRSRSR 240
Query: 226 PRSRSYSPRGKYSRRSPSLSPARSASQRSPSGSP 259
RSRS SP+ K SRRSP+ S +RS RS S SP
Sbjct: 241 SRSRSRSPKAKSSRRSPAKSTSRSPGPRSKSRSP 274
>gi|168000741|ref|XP_001753074.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695773|gb|EDQ82115.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 279
Score = 285 bits (730), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 147/199 (73%), Positives = 163/199 (81%), Gaps = 16/199 (8%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSR+SRT+YVGNLPGD R RE+EDLFYKYG IVDIDLK+PPRPPGY F+EFED RDAED
Sbjct: 1 MSSRASRTIYVGNLPGDVREREIEDLFYKYGRIVDIDLKLPPRPPGYCFIEFEDARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRR-HSSSMDRYSSY--------------SSGGSRGVS 105
AIRGRDGYNFDG RLRVE+AHGGR +S+DRYS Y + G + GVS
Sbjct: 61 AIRGRDGYNFDGNRLRVEIAHGGRGPPPASVDRYSIYSSGGGRGGGGSASENGGRAGGVS 120
Query: 106 RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD-RGGMTGIVDYTSYDDMKYAI 164
RRS+YRV VTGLPSSASWQDLKDHMRRAGDVCF+QVFRD G GIVD+T+YDDMKYAI
Sbjct: 121 RRSEYRVTVTGLPSSASWQDLKDHMRRAGDVCFAQVFRDGSAGTMGIVDFTNYDDMKYAI 180
Query: 165 RKLDRSEFRNAFSRSYVRV 183
RKLD SEFRN FSRS++RV
Sbjct: 181 RKLDDSEFRNPFSRSFIRV 199
>gi|5815238|gb|AAD52612.1| splicing factor SR1D [Arabidopsis thaliana]
Length = 261
Score = 285 bits (729), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 143/210 (68%), Positives = 163/210 (77%), Gaps = 13/210 (6%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSRSSRT+YVGNLPGD R REVEDLF KYGP+V IDLK+PPRPPGYAF+EF+D RDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV-------------SRR 107
AI GRDGY+FDG+RLRVELAHGGRR S + G SRR
Sbjct: 61 AIHGRDGYDFDGHRLRVELAHGGRRSSDDTRGSFNGGGRGGGRGRGDGRGDGGSRGPSRR 120
Query: 108 SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKL 167
S++RVLVTGLPSSASWQDLKDHMR+ GDVCFSQV+RD G TG+VDYT Y+DMKYA++KL
Sbjct: 121 SEFRVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKL 180
Query: 168 DRSEFRNAFSRSYVRVREYDSRRSYSRSPS 197
D +EFRNAFS YVRVREYDSR+ R+ +
Sbjct: 181 DDTEFRNAFSNGYVRVREYDSRKDSRRAEA 210
>gi|68035998|gb|AAY84875.1| alternative splicing regulator [Triticum aestivum]
Length = 254
Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 139/188 (73%), Positives = 161/188 (85%), Gaps = 2/188 (1%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R+ RT+YVGNLP D R RE+EDLF KYGPIVDIDLKIPPRPP YAF+EFED RDA+D
Sbjct: 1 MSRRNGRTIYVGNLPEDIREREIEDLFCKYGPIVDIDLKIPPRPPVYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRDGY+FDG +LRVELAHGG+ S DR +SY+S G RG RRSDYRV+VTGLPSS
Sbjct: 61 AIYGRDGYDFDGCKLRVELAHGGK--GPSFDRPNSYTSSGRRGALRRSDYRVIVTGLPSS 118
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSY 180
ASWQDLKDHMRRAGDVCFS V+ G +TGIV++ +Y+DMK+AIRKLD SEFRNAFSR+Y
Sbjct: 119 ASWQDLKDHMRRAGDVCFSDVYPGAGAITGIVEFPNYEDMKHAIRKLDDSEFRNAFSRTY 178
Query: 181 VRVREYDS 188
+RVREY++
Sbjct: 179 IRVREYNA 186
>gi|55792397|gb|AAV65309.1| splicing factor SF2-like protein [Hordeum vulgare subsp. vulgare]
Length = 245
Score = 284 bits (727), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 141/186 (75%), Positives = 161/186 (86%), Gaps = 1/186 (0%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SRT+YVGNLPGD R REVEDLFYKYG IV+IDLK+PPRPPG+AF+EFED RDAED
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI+GRDGYNFDG RLRVELAHGGR +SSS+ S G GVSR ++YRVLVTGLPSS
Sbjct: 61 AIQGRDGYNFDGNRLRVELAHGGRANSSSLPN-SHGGGGRRGGVSRHTEYRVLVTGLPSS 119
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSY 180
ASWQDLKDHMR+AGDVCFS+V+R+ G GIVDYT+YDDMKYAIRKLD +EF+NAFSR+
Sbjct: 120 ASWQDLKDHMRKAGDVCFSEVYREVVGTIGIVDYTNYDDMKYAIRKLDDTEFKNAFSRAP 179
Query: 181 VRVREY 186
+RV+EY
Sbjct: 180 IRVKEY 185
>gi|357112280|ref|XP_003557937.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Brachypodium
distachyon]
Length = 289
Score = 283 bits (723), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 146/195 (74%), Positives = 162/195 (83%), Gaps = 7/195 (3%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SRT+YVGNLPGD R REVEDLFYKYG IVDIDLK+PPRPPGYAF+EFED RDAED
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKVPPRPPGYAFVEFEDPRDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSS-SMDRYSSYSSGGSRG------VSRRSDYRVL 113
A GRDGYNFDG RLRVE AHGGR S DR SS+ GG G VSR +DYRVL
Sbjct: 61 ACAGRDGYNFDGNRLRVEPAHGGRGSGGPSHDRSSSFGGGGGGGGGGRRGVSRHTDYRVL 120
Query: 114 VTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
VTGLPSSASWQDLKDHMRRAGDVCFS+V+R+ G TGIVDYT+YDDMKYAI+KLD +EF+
Sbjct: 121 VTGLPSSASWQDLKDHMRRAGDVCFSEVYREGSGTTGIVDYTNYDDMKYAIKKLDDTEFK 180
Query: 174 NAFSRSYVRVREYDS 188
NAFS+ Y+RV+EYD+
Sbjct: 181 NAFSKGYIRVKEYDA 195
>gi|52140006|gb|AAU29329.1| ASF/SF2-like pre-mRNA splicing factor SRP32' [Zea mays]
gi|413955776|gb|AFW88425.1| ASF/SF2-like pre-mRNA splicing factor SRP32 [Zea mays]
Length = 257
Score = 283 bits (723), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 144/192 (75%), Positives = 164/192 (85%), Gaps = 2/192 (1%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SRT+YVGNLPGD R REVEDLFYKYG IVDIDLK+PPRPPGYAF+EFED RDAE+
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGKIVDIDLKVPPRPPGYAFVEFEDPRDAEE 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMD--RYSSYSSGGSRGVSRRSDYRVLVTGLP 118
AI GRDGYNFDG+RLRVE AHGGR ++SS D G RGVSR S+YRVLVTGLP
Sbjct: 61 AIAGRDGYNFDGHRLRVEAAHGGRGNASSHDRSSGFGGGGGARRGVSRHSEYRVLVTGLP 120
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSR 178
SSASWQDLKDHMR+AGDVCFS+V+R+ GG GIVDYT+YDDMKYAI+KLD +EFRNAF R
Sbjct: 121 SSASWQDLKDHMRKAGDVCFSEVYREGGGTVGIVDYTNYDDMKYAIKKLDDTEFRNAFGR 180
Query: 179 SYVRVREYDSRR 190
+Y+RV+EY+ +R
Sbjct: 181 AYIRVKEYNGKR 192
>gi|448878366|gb|AGE46146.1| arginine/serine-rich splicing factor SR30 transcript V [Sorghum
bicolor]
Length = 278
Score = 283 bits (723), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 145/188 (77%), Positives = 164/188 (87%), Gaps = 1/188 (0%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M+ R+ T+YVGNLPGD R REV+DLFYKYG IV+IDLKIPPRPPG+AF+EFED DAED
Sbjct: 1 MTRRNGCTIYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDPHDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRDGYNFDG+RLRVELAHGGR SS DR SSYSS G RG S+RSDYRV+VTGLPSS
Sbjct: 61 AIYGRDGYNFDGHRLRVELAHGGR-GPSSFDRSSSYSSAGQRGASKRSDYRVMVTGLPSS 119
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSY 180
ASWQDLKDHMRRAGDVCF+ V+R+ G GI DYT+Y+DMK+AIRKLD SEFRNAFSR+Y
Sbjct: 120 ASWQDLKDHMRRAGDVCFTDVYREAGATIGIADYTNYEDMKHAIRKLDDSEFRNAFSRTY 179
Query: 181 VRVREYDS 188
+RVREYD+
Sbjct: 180 IRVREYDA 187
>gi|226496385|ref|NP_001151386.1| LOC100285019 [Zea mays]
gi|195646352|gb|ACG42644.1| pre-mRNA-splicing factor SF2 [Zea mays]
Length = 275
Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 146/188 (77%), Positives = 165/188 (87%), Gaps = 2/188 (1%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M+ R+ T+YVGNLPGD R REV+DLFYKYG IV+IDLKIPPRPPG+AF+EFED DAED
Sbjct: 1 MTRRNGCTIYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDA-DAED 59
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRDGYNFDG+RLRVELAHGGR +SS DR SSYSS G RG S+RSDYRV+VTGLPSS
Sbjct: 60 AIYGRDGYNFDGHRLRVELAHGGR-GTSSFDRSSSYSSAGQRGASKRSDYRVMVTGLPSS 118
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSY 180
ASWQDLKDHMRRAGDVCF+ V+R+ G GI DYT+Y+DMK+AIRKLD SEFRNAFSR+Y
Sbjct: 119 ASWQDLKDHMRRAGDVCFTDVYREAGATIGIADYTNYEDMKHAIRKLDDSEFRNAFSRTY 178
Query: 181 VRVREYDS 188
VRVREYD+
Sbjct: 179 VRVREYDA 186
>gi|108708089|gb|ABF95884.1| Pre-mRNA splicing factor SF2, putative, expressed [Oryza sativa
Japonica Group]
gi|215692748|dbj|BAG88168.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218192809|gb|EEC75236.1| hypothetical protein OsI_11526 [Oryza sativa Indica Group]
gi|222624911|gb|EEE59043.1| hypothetical protein OsJ_10806 [Oryza sativa Japonica Group]
Length = 286
Score = 281 bits (719), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 178/261 (68%), Positives = 202/261 (77%), Gaps = 5/261 (1%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SRT+YVGNLPGD R REVEDLFYKYG IVDIDLKIPPRPPGYAF+EFED RDAE+
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAEE 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHS-SSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPS 119
A GRDGYNFDG+RLRVE AHGGR + SS DR S++ GG RGVSR S+YRVLVTGLPS
Sbjct: 61 ACAGRDGYNFDGHRLRVEPAHGGRGNGGSSFDRPSNFGGGGRRGVSRHSEYRVLVTGLPS 120
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRS 179
SASWQDLKDHMR+AGDVCFS+V+R+ GG GIVDYT+YDDMKYAI+KLD SEFRNAFS+
Sbjct: 121 SASWQDLKDHMRKAGDVCFSEVYREGGGTVGIVDYTNYDDMKYAIKKLDDSEFRNAFSKG 180
Query: 180 YVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYSPRGKYSR 239
++RV+EYD +R+ S S SRSP SRS+SRS S S S S S S S+
Sbjct: 181 HIRVKEYDGKRARSYSRSRSPSRSRSKSRSLSKSPRTRRSASRSRSRSRSVSSRSRSASK 240
Query: 240 RS-PSLSPARSASQRSPSGSP 259
PS SPARS +SP+ SP
Sbjct: 241 GRSPSRSPARS---KSPNASP 258
>gi|448878358|gb|AGE46142.1| arginine/serine-rich splicing factor SR30 transcript I [Sorghum
bicolor]
Length = 255
Score = 280 bits (717), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 145/188 (77%), Positives = 164/188 (87%), Gaps = 1/188 (0%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M+ R+ T+YVGNLPGD R REV+DLFYKYG IV+IDLKIPPRPPG+AF+EFED DAED
Sbjct: 1 MTRRNGCTIYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDPHDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRDGYNFDG+RLRVELAHGGR SS DR SSYSS G RG S+RSDYRV+VTGLPSS
Sbjct: 61 AIYGRDGYNFDGHRLRVELAHGGR-GPSSFDRSSSYSSAGQRGASKRSDYRVMVTGLPSS 119
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSY 180
ASWQDLKDHMRRAGDVCF+ V+R+ G GI DYT+Y+DMK+AIRKLD SEFRNAFSR+Y
Sbjct: 120 ASWQDLKDHMRRAGDVCFTDVYREAGATIGIADYTNYEDMKHAIRKLDDSEFRNAFSRTY 179
Query: 181 VRVREYDS 188
+RVREYD+
Sbjct: 180 IRVREYDA 187
>gi|52140014|gb|AAU29335.1| ASF/SF2-like pre-mRNA splicing factor SRP31'' [Zea mays]
gi|224035263|gb|ACN36707.1| unknown [Zea mays]
gi|413944990|gb|AFW77639.1| ASF/SF2-like pre-mRNA splicing factor SRP31 [Zea mays]
Length = 284
Score = 280 bits (717), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 147/196 (75%), Positives = 166/196 (84%), Gaps = 9/196 (4%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYK--------YGPIVDIDLKIPPRPPGYAFLEF 52
M+ R+ T+YVGNLPGD R REV+DLFYK YG IV+IDLKIPPRPPG+AF+EF
Sbjct: 1 MTRRNGCTIYVGNLPGDIREREVDDLFYKGRQCGLRMYGRIVEIDLKIPPRPPGFAFVEF 60
Query: 53 EDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRV 112
ED RDAEDAI GRDGYNFDG+RLRVELAHGGR +SS DR SSYSS G RG S+RSDYRV
Sbjct: 61 EDARDAEDAIYGRDGYNFDGHRLRVELAHGGR-GTSSFDRSSSYSSAGQRGASKRSDYRV 119
Query: 113 LVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
+VTGLPSSASWQDLKDHMRRAGDVCF+ V+R+ G GI DYT+Y+DMK+AIRKLD SEF
Sbjct: 120 MVTGLPSSASWQDLKDHMRRAGDVCFTDVYREAGATIGIADYTNYEDMKHAIRKLDDSEF 179
Query: 173 RNAFSRSYVRVREYDS 188
RNAFSR+YVRVREYD+
Sbjct: 180 RNAFSRTYVRVREYDA 195
>gi|166844|gb|AAA32856.1| ribonucleoprotein [Arabidopsis thaliana]
gi|1582992|prf||2119375A Ser/Arg-rich protein
Length = 303
Score = 279 bits (714), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 142/205 (69%), Positives = 161/205 (78%), Gaps = 10/205 (4%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSRSSRT+YVGNLPGD R REVEDLF KYGP+V IDLK+PPRPPGYAF+EF+D RDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV---------SRRSDYR 111
AI GRDGY+FDG+RLRVELAHGGRR S + G SRRS++R
Sbjct: 61 AIHGRDGYDFDGHRLRVELAHGGRRSSDDTRGSFNGGGRGGGRGRGDGGSRGPSRRSEFR 120
Query: 112 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSE 171
VLVT L SSASWQDLKDH+ + GDVCFSQV+RD G TG+VDYT Y+DMKYA++KLD +E
Sbjct: 121 VLVTWLASSASWQDLKDHIAKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKLDDTE 180
Query: 172 FRNAFSRSYVRVREYDSRRSYSRSP 196
FRNAFS YVRVREYDSR+ SRSP
Sbjct: 181 FRNAFSNGYVRVREYDSRKD-SRSP 204
>gi|242052807|ref|XP_002455549.1| hypothetical protein SORBIDRAFT_03g013010 [Sorghum bicolor]
gi|241927524|gb|EES00669.1| hypothetical protein SORBIDRAFT_03g013010 [Sorghum bicolor]
Length = 186
Score = 276 bits (706), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 146/181 (80%), Positives = 158/181 (87%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R+SRT+YVGNLPGD R REVEDLFYKYG I+DIDLKIPPRPPGYAF+EFED RDA+D
Sbjct: 1 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRDGYNFDGYRLRVELAHGGR S S DR SSYSS GVSRRSD+RV+VTGLPSS
Sbjct: 61 AIYGRDGYNFDGYRLRVELAHGGRGQSYSYDRSSSYSSARRGGVSRRSDFRVMVTGLPSS 120
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSY 180
ASWQDLKDHMRRAGDVCFS V+R+ G GIVDYT+YDDMKYAIRKLD S+FRNAFSR
Sbjct: 121 ASWQDLKDHMRRAGDVCFSDVYREAGETIGIVDYTNYDDMKYAIRKLDDSQFRNAFSRCS 180
Query: 181 V 181
+
Sbjct: 181 I 181
>gi|297814065|ref|XP_002874916.1| hypothetical protein ARALYDRAFT_327556 [Arabidopsis lyrata subsp.
lyrata]
gi|297320753|gb|EFH51175.1| hypothetical protein ARALYDRAFT_327556 [Arabidopsis lyrata subsp.
lyrata]
Length = 281
Score = 271 bits (692), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 140/192 (72%), Positives = 154/192 (80%), Gaps = 10/192 (5%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSRSSRT+YVGNLPGD R REVEDLF KYGP+V IDLKIPPRPPGYAF+EFED RDA+D
Sbjct: 1 MSSRSSRTIYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADD 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV----------SRRSDY 110
AI GRDGY+FDG+RLRVELAHGGRR S S G R SRRS+Y
Sbjct: 61 AIYGRDGYDFDGHRLRVELAHGGRRSSHDARGSYSGGGRGGRDGGDGGVRGRGPSRRSEY 120
Query: 111 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRS 170
RV+V+GLPSSASWQDLKDHMR+ G+VCFSQVFRD G TGIVDYTSY+DMKYAI+KLD +
Sbjct: 121 RVVVSGLPSSASWQDLKDHMRKGGEVCFSQVFRDGRGTTGIVDYTSYEDMKYAIKKLDDT 180
Query: 171 EFRNAFSRSYVR 182
EFRNAFS YVR
Sbjct: 181 EFRNAFSHGYVR 192
>gi|30679143|ref|NP_567235.3| splicing factor SR1B [Arabidopsis thaliana]
gi|332656770|gb|AEE82170.1| splicing factor SR1B [Arabidopsis thaliana]
Length = 278
Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 143/197 (72%), Positives = 156/197 (79%), Gaps = 13/197 (6%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSRSSRT+YVGNLPGD R REVEDLF KYGP+V IDLKIPPRPPGYAF+EFED RDA+D
Sbjct: 1 MSSRSSRTIYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADD 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV----------SRRSDY 110
AI GRDGY+FDG+ LRVELAHGGRR S S G RG SRRS+Y
Sbjct: 61 AIYGRDGYDFDGHHLRVELAHGGRRSSHDARGSYSGRGRGGRGGGDGGGRERGPSRRSEY 120
Query: 111 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRS 170
RV+V+GLPSSASWQDLKDHMR+ G+VCFSQVFRD G TGIVDYTSY+DMKYA LD +
Sbjct: 121 RVVVSGLPSSASWQDLKDHMRKGGEVCFSQVFRDGRGTTGIVDYTSYEDMKYA---LDDT 177
Query: 171 EFRNAFSRSYVRVREYD 187
EFRNAFS YVRVREYD
Sbjct: 178 EFRNAFSHEYVRVREYD 194
>gi|357516359|ref|XP_003628468.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355522490|gb|AET02944.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 273
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 152/221 (68%), Positives = 171/221 (77%), Gaps = 3/221 (1%)
Query: 29 KYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSS 88
KYG I IDLK+PPRPPGYAF+EFED +DAEDAIRGRDGY+FDG+RLRVE AHGGR +SS
Sbjct: 2 KYGHITHIDLKVPPRPPGYAFVEFEDVQDAEDAIRGRDGYDFDGHRLRVEAAHGGRGNSS 61
Query: 89 SMDRYSSYSSGGSRGVSRRS-DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 147
S DRYSS+S+G R +YRV+V GLPSSASWQDLKDHMR+AGDVCFSQVF D G
Sbjct: 62 SRDRYSSHSNGRGGRGVSRRSEYRVIVNGLPSSASWQDLKDHMRKAGDVCFSQVFHDGRG 121
Query: 148 MTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRS 207
TGIVDYT+YDDMKYAI+KLD SEFRNAFS+SYVRVREYDSRR SRSP R P +SR RS
Sbjct: 122 TTGIVDYTNYDDMKYAIKKLDDSEFRNAFSKSYVRVREYDSRRD-SRSPGRGPSHSRGRS 180
Query: 208 RSPYYSRSRSPSRSWSYSPRSRSYSPRGKYSRRSPSLSPAR 248
S SRS SP+GK S+RSP+ SPA+
Sbjct: 181 YS-RSRSRSRSHSRSYSPGHSRSKSPKGKSSQRSPAKSPAK 220
>gi|326495240|dbj|BAJ85716.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326504388|dbj|BAJ91026.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510429|dbj|BAJ87431.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326523109|dbj|BAJ88595.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 294
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 141/195 (72%), Positives = 156/195 (80%), Gaps = 8/195 (4%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SRT+YVGNLPGD R R VEDLFYKYG IVDIDLK+PPRPPGYAF+EFED RDAED
Sbjct: 1 MSRRWSRTIYVGNLPGDIRERAVEDLFYKYGRIVDIDLKVPPRPPGYAFVEFEDPRDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGR--------RHSSSMDRYSSYSSGGSRGVSRRSDYRV 112
A GRDGYNFDG RLRVE AHGGR R S + G RGVSR +DYRV
Sbjct: 61 ACAGRDGYNFDGNRLRVEPAHGGRGSGGPSHDRSGSFGGGGGAGGGSGRRGVSRHTDYRV 120
Query: 113 LVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
LVTGLPSSASWQDLKDHMRRAGDVCFS+V+R+ GG GI DYT+YDDMKYAI+KLD +EF
Sbjct: 121 LVTGLPSSASWQDLKDHMRRAGDVCFSEVYREGGGTIGIADYTNYDDMKYAIKKLDDTEF 180
Query: 173 RNAFSRSYVRVREYD 187
+NAFS+ Y+RV+EYD
Sbjct: 181 KNAFSKGYIRVKEYD 195
>gi|255557727|ref|XP_002519893.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223540939|gb|EEF42497.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 264
Score = 263 bits (673), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 145/237 (61%), Positives = 168/237 (70%), Gaps = 29/237 (12%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SRT+YVGNLP D R EVEDLFYKYG I+DI+LKIPPRPP Y F+EFE+ RDAED
Sbjct: 1 MSGRFSRTIYVGNLPSDIREWEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENTRDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSS-------MDRYSSYSSGGSRGVSRRSDYRVL 113
AIRGRDGYNFDG RLRVELAHGGR SSS SGG +SR S++RV+
Sbjct: 61 AIRGRDGYNFDGCRLRVELAHGGRGQSSSDRRGGYGGSGGGGSGSGGRYCISRHSEFRVI 120
Query: 114 VTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
V GLPSSASWQDLKDHMR+AGDVCF++V RD G GIVDYT+Y+DMKYAIRKLD +EFR
Sbjct: 121 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSDGTFGIVDYTNYEDMKYAIRKLDDTEFR 180
Query: 174 NAFSRSYVRVREYD--------------------SRRSYSRSPSRSPYYSRSRSRSP 210
N ++R+Y+RV+ Y+ +S RSPSRS S+SRS SP
Sbjct: 181 NPWARAYIRVKMYENSPSRSRSRSRSRSRSPRRNRSKSLERSPSRS--VSKSRSASP 235
>gi|302804889|ref|XP_002984196.1| hypothetical protein SELMODRAFT_119951 [Selaginella moellendorffii]
gi|300148045|gb|EFJ14706.1| hypothetical protein SELMODRAFT_119951 [Selaginella moellendorffii]
Length = 298
Score = 262 bits (670), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 139/195 (71%), Positives = 158/195 (81%), Gaps = 12/195 (6%)
Query: 3 SRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAI 62
SRSSRT+YVGNLPGD R E++DLFYKYG I+DIDLK+PPRPPGYAF+EF+D RDAEDAI
Sbjct: 2 SRSSRTIYVGNLPGDVRESEIDDLFYKYGRILDIDLKLPPRPPGYAFIEFDDPRDAEDAI 61
Query: 63 RGRDGYNFDGYRLRVELAH-GGRRHSS-SMDRYSS----------YSSGGSRGVSRRSDY 110
+ RDGY FDG+RLRVE AH GGR H S DR+S+ GG RGVSRRS+Y
Sbjct: 62 KARDGYVFDGHRLRVEFAHSGGRGHPSYGGDRHSNSYRGGGGGGGGGGGGGRGVSRRSEY 121
Query: 111 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRS 170
RV+VTGLPSSASWQDLKDHMR AGDVCF+QVFR+ G GIVD+T+YDDMK AIRKLD +
Sbjct: 122 RVVVTGLPSSASWQDLKDHMRTAGDVCFAQVFRESNGTRGIVDFTNYDDMKNAIRKLDDT 181
Query: 171 EFRNAFSRSYVRVRE 185
EFRN FS SY+RVRE
Sbjct: 182 EFRNPFSHSYIRVRE 196
>gi|297816162|ref|XP_002875964.1| hypothetical protein ARALYDRAFT_906222 [Arabidopsis lyrata subsp.
lyrata]
gi|297321802|gb|EFH52223.1| hypothetical protein ARALYDRAFT_906222 [Arabidopsis lyrata subsp.
lyrata]
Length = 301
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 131/200 (65%), Positives = 154/200 (77%), Gaps = 13/200 (6%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SR++YVGNLPGD R E+EDLFYKYG IVDI+LK+PPRPP Y F+EFE RDAED
Sbjct: 1 MSGRFSRSIYVGNLPGDIREHEIEDLFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR-------------GVSRR 107
AI+GRDGYNFDG RLRVELAHGGR SSS R GG GVSR
Sbjct: 61 AIKGRDGYNFDGCRLRVELAHGGRGQSSSDRRGGYGGGGGGGYGGGGGGGGSARFGVSRH 120
Query: 108 SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKL 167
S++RV+V GLPSSASWQDLKDHMR+AGDVCF++V RD G G+VDYT+YDDMKYAIRKL
Sbjct: 121 SEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKL 180
Query: 168 DRSEFRNAFSRSYVRVREYD 187
D +EFRN ++R ++RV++Y+
Sbjct: 181 DDTEFRNPWARGFIRVKKYE 200
>gi|302781020|ref|XP_002972284.1| hypothetical protein SELMODRAFT_97566 [Selaginella moellendorffii]
gi|300159751|gb|EFJ26370.1| hypothetical protein SELMODRAFT_97566 [Selaginella moellendorffii]
Length = 288
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 139/195 (71%), Positives = 158/195 (81%), Gaps = 12/195 (6%)
Query: 3 SRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAI 62
SRSSRT+YVGNLPGD R E++DLFYKYG I+DIDLK+PPRPPGYAF+EF+D RDAEDAI
Sbjct: 2 SRSSRTIYVGNLPGDVRESEIDDLFYKYGRILDIDLKLPPRPPGYAFIEFDDPRDAEDAI 61
Query: 63 RGRDGYNFDGYRLRVELAH-GGRRHSS-SMDRYSS----------YSSGGSRGVSRRSDY 110
+ RDGY FDG+RLRVE AH GGR H S DR+S+ GG RGVSRRS+Y
Sbjct: 62 KARDGYVFDGHRLRVEFAHSGGRGHPSYGGDRHSNSYRGGGGGGGGGGGGGRGVSRRSEY 121
Query: 111 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRS 170
RV+VTGLPSSASWQDLKDHMR AGDVCF+QVFR+ G GIVD+T+YDDMK AIRKLD +
Sbjct: 122 RVVVTGLPSSASWQDLKDHMRTAGDVCFAQVFRESNGTRGIVDFTNYDDMKNAIRKLDDT 181
Query: 171 EFRNAFSRSYVRVRE 185
EFRN FS SY+RVRE
Sbjct: 182 EFRNPFSHSYIRVRE 196
>gi|357464165|ref|XP_003602364.1| RNA-binding protein [Medicago truncatula]
gi|355491412|gb|AES72615.1| RNA-binding protein [Medicago truncatula]
Length = 380
Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 132/200 (66%), Positives = 156/200 (78%), Gaps = 13/200 (6%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSR SRT+YVGNLP D R E+EDLFYKYG I++I+LK+PPRPP Y F+EF++ RDAED
Sbjct: 108 MSSRFSRTIYVGNLPADIRESEIEDLFYKYGRIMEIELKVPPRPPCYCFVEFDNARDAED 167
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSS-------------MDRYSSYSSGGSRGVSRR 107
AIRGRDGYNFDG RLRVELAHGGR SSS + GG GVSR
Sbjct: 168 AIRGRDGYNFDGCRLRVELAHGGRGPSSSDRRGYGGGGGGGGRGGGGDSAGGGRFGVSRH 227
Query: 108 SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKL 167
S++RV+V GLPSSASWQDLKDHMR+AGDVCF++V RD G G+VDYT+YDDMKYAIRKL
Sbjct: 228 SEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYDDMKYAIRKL 287
Query: 168 DRSEFRNAFSRSYVRVREYD 187
D +EFRN ++RSY+RVR+Y+
Sbjct: 288 DDTEFRNPWARSYIRVRKYE 307
>gi|42565781|ref|NP_190512.3| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
gi|334185842|ref|NP_001190041.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
gi|124301106|gb|ABN04805.1| At3g49430 [Arabidopsis thaliana]
gi|332645020|gb|AEE78541.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
gi|332645022|gb|AEE78543.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
Length = 300
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 128/199 (64%), Positives = 152/199 (76%), Gaps = 12/199 (6%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SR++YVGNLPGD R E+ED+FYKYG IVDI+LK+PPRPP Y F+EFE RDAED
Sbjct: 1 MSGRFSRSIYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR------------GVSRRS 108
AI+GRDGYN DG RLRVELAHGGR SSS R G GVSR S
Sbjct: 61 AIKGRDGYNLDGCRLRVELAHGGRGQSSSDRRGGYGGGGSGYGGGGGGGGSARFGVSRHS 120
Query: 109 DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLD 168
++RV+V GLPSSASWQDLKDHMR+AGDVCF++V RD G G+VDYT+YDDMKYAIRKLD
Sbjct: 121 EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLD 180
Query: 169 RSEFRNAFSRSYVRVREYD 187
+EFRN ++R ++RV++Y+
Sbjct: 181 DTEFRNPWARGFIRVKKYE 199
>gi|12324445|gb|AAG52185.1|AC012329_12 putative splicing factor; 53460-55514 [Arabidopsis thaliana]
Length = 295
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 128/199 (64%), Positives = 152/199 (76%), Gaps = 12/199 (6%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SR++YVGNLPGD R E+ED+FYKYG IVDI+LK+PPRPP Y F+EFE RDAED
Sbjct: 1 MSGRFSRSIYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR------------GVSRRS 108
AI+GRDGYN DG RLRVELAHGGR SSS R G GVSR S
Sbjct: 61 AIKGRDGYNLDGCRLRVELAHGGRGQSSSDRRGGYGGGGSGYGGGGGGGGSARFGVSRHS 120
Query: 109 DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLD 168
++RV+V GLPSSASWQDLKDHMR+AGDVCF++V RD G G+VDYT+YDDMKYAIRKLD
Sbjct: 121 EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLD 180
Query: 169 RSEFRNAFSRSYVRVREYD 187
+EFRN ++R ++RV++Y+
Sbjct: 181 DTEFRNPWARGFIRVKKYE 199
>gi|145332797|ref|NP_001078264.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
gi|332645021|gb|AEE78542.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
Length = 297
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 128/199 (64%), Positives = 152/199 (76%), Gaps = 12/199 (6%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SR++YVGNLPGD R E+ED+FYKYG IVDI+LK+PPRPP Y F+EFE RDAED
Sbjct: 1 MSGRFSRSIYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR------------GVSRRS 108
AI+GRDGYN DG RLRVELAHGGR SSS R G GVSR S
Sbjct: 61 AIKGRDGYNLDGCRLRVELAHGGRGQSSSDRRGGYGGGGSGYGGGGGGGGSARFGVSRHS 120
Query: 109 DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLD 168
++RV+V GLPSSASWQDLKDHMR+AGDVCF++V RD G G+VDYT+YDDMKYAIRKLD
Sbjct: 121 EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLD 180
Query: 169 RSEFRNAFSRSYVRVREYD 187
+EFRN ++R ++RV++Y+
Sbjct: 181 DTEFRNPWARGFIRVKKYE 199
>gi|357464169|ref|XP_003602366.1| RNA-binding protein [Medicago truncatula]
gi|355491414|gb|AES72617.1| RNA-binding protein [Medicago truncatula]
Length = 273
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 132/200 (66%), Positives = 156/200 (78%), Gaps = 13/200 (6%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSR SRT+YVGNLP D R E+EDLFYKYG I++I+LK+PPRPP Y F+EF++ RDAED
Sbjct: 1 MSSRFSRTIYVGNLPADIRESEIEDLFYKYGRIMEIELKVPPRPPCYCFVEFDNARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSS-------------MDRYSSYSSGGSRGVSRR 107
AIRGRDGYNFDG RLRVELAHGGR SSS + GG GVSR
Sbjct: 61 AIRGRDGYNFDGCRLRVELAHGGRGPSSSDRRGYGGGGGGGGRGGGGDSAGGGRFGVSRH 120
Query: 108 SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKL 167
S++RV+V GLPSSASWQDLKDHMR+AGDVCF++V RD G G+VDYT+YDDMKYAIRKL
Sbjct: 121 SEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYDDMKYAIRKL 180
Query: 168 DRSEFRNAFSRSYVRVREYD 187
D +EFRN ++RSY+RVR+Y+
Sbjct: 181 DDTEFRNPWARSYIRVRKYE 200
>gi|357464167|ref|XP_003602365.1| RNA-binding protein [Medicago truncatula]
gi|355491413|gb|AES72616.1| RNA-binding protein [Medicago truncatula]
Length = 272
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 132/200 (66%), Positives = 156/200 (78%), Gaps = 13/200 (6%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSR SRT+YVGNLP D R E+EDLFYKYG I++I+LK+PPRPP Y F+EF++ RDAED
Sbjct: 1 MSSRFSRTIYVGNLPADIRESEIEDLFYKYGRIMEIELKVPPRPPCYCFVEFDNARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSS-------------MDRYSSYSSGGSRGVSRR 107
AIRGRDGYNFDG RLRVELAHGGR SSS + GG GVSR
Sbjct: 61 AIRGRDGYNFDGCRLRVELAHGGRGPSSSDRRGYGGGGGGGGRGGGGDSAGGGRFGVSRH 120
Query: 108 SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKL 167
S++RV+V GLPSSASWQDLKDHMR+AGDVCF++V RD G G+VDYT+YDDMKYAIRKL
Sbjct: 121 SEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYDDMKYAIRKL 180
Query: 168 DRSEFRNAFSRSYVRVREYD 187
D +EFRN ++RSY+RVR+Y+
Sbjct: 181 DDTEFRNPWARSYIRVRKYE 200
>gi|255648057|gb|ACU24484.1| unknown [Glycine max]
Length = 267
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 131/193 (67%), Positives = 156/193 (80%), Gaps = 6/193 (3%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SRT+YVGNLP D R E+EDLFYKYG I+DI+LK+PPRPP Y F+EF++ RDAED
Sbjct: 1 MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVEFDNARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSS------MDRYSSYSSGGSRGVSRRSDYRVLV 114
AIRGRDGYNFDG RLRVELAHGGR SSS + + GG G+SR S++RV+V
Sbjct: 61 AIRGRDGYNFDGCRLRVELAHGGRGPSSSDRRGYGGGGGNGGAGGGRFGISRHSEFRVIV 120
Query: 115 TGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRN 174
GLPSSASWQDLKDHMR+AGDVCF++V RD G GIVDYT+YDDMKYAIRKLD +EFRN
Sbjct: 121 RGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDAEFRN 180
Query: 175 AFSRSYVRVREYD 187
++R+Y+RVR+Y+
Sbjct: 181 PWARAYIRVRKYE 193
>gi|359490737|ref|XP_003634148.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 1 [Vitis
vinifera]
gi|359490739|ref|XP_003634149.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 2 [Vitis
vinifera]
gi|302143975|emb|CBI23080.3| unnamed protein product [Vitis vinifera]
Length = 250
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 149/225 (66%), Positives = 174/225 (77%), Gaps = 5/225 (2%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SRT+YVGNLP D R E+EDLFYKYG I+D++LKIPPRPP Y F+EFE+ RDAED
Sbjct: 1 MSGRFSRTIYVGNLPSDIREYEIEDLFYKYGRILDVELKIPPRPPCYCFVEFENSRDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMD--RYSSYSSGGSRGVSRRSDYRVLVTGLP 118
AIRGRDGYNFDG RLRVELAHGGR SSS D GG GVSR S+YRV+V GLP
Sbjct: 61 AIRGRDGYNFDGCRLRVELAHGGRGQSSSSDRRGGHGSGGGGRFGVSRHSEYRVIVRGLP 120
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSR 178
SSASWQDLKDHMR+AGDVCF++V RD G G+VDYT+++DMKYAIRKLD +EFRN ++R
Sbjct: 121 SSASWQDLKDHMRKAGDVCFAEVSRDADGTFGLVDYTNHEDMKYAIRKLDDTEFRNPWAR 180
Query: 179 SYVRVREYD---SRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSR 220
+Y+RV+ YD RS S SPSRS R+RS+S S SRS S+
Sbjct: 181 AYIRVKRYDVSPRSRSRSHSPSRSRSLKRNRSKSLERSVSRSASK 225
>gi|388500622|gb|AFK38377.1| unknown [Lotus japonicus]
Length = 174
Score = 257 bits (657), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 137/169 (81%), Positives = 149/169 (88%), Gaps = 1/169 (0%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSRSSRT+YVGNLPGD R+REVED+FYK+GPIVDIDLKIPPRPPGYAF++FED RDAED
Sbjct: 1 MSSRSSRTIYVGNLPGDIRLREVEDIFYKFGPIVDIDLKIPPRPPGYAFVQFEDARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGR-RHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPS 119
AI RDGY+FDG+RLRVELAHGGR SS S SRG SRRSDYRVLVTGLP
Sbjct: 61 AIYYRDGYDFDGFRLRVELAHGGRGSSSSVDRYSSYSGGSSSRGASRRSDYRVLVTGLPP 120
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLD 168
SASWQDLKDHMR+AGDVCFSQVFR+RGGMTGIVDYT+YDDMKYA+RKLD
Sbjct: 121 SASWQDLKDHMRKAGDVCFSQVFRERGGMTGIVDYTNYDDMKYALRKLD 169
>gi|224285040|gb|ACN40249.1| unknown [Picea sitchensis]
Length = 398
Score = 257 bits (656), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 134/185 (72%), Positives = 152/185 (82%), Gaps = 6/185 (3%)
Query: 4 RSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIR 63
RS+ T+YVGNLPGD R E+EDLFYKYG I+DIDLK+PPRPPGY F+EF++ RDAEDAIR
Sbjct: 3 RSNSTIYVGNLPGDIRESEIEDLFYKYGRIIDIDLKLPPRPPGYCFIEFDNARDAEDAIR 62
Query: 64 GRDGYNFDGYRLRVELAHGGRRHSSSMDRY--SSYSSGGSRGVSRRSD-YRVLVTGLPSS 120
GRDGY FDG+RLRVE AHG +SS+D Y S S S G+ RRS YRV+V GLP+S
Sbjct: 63 GRDGYKFDGHRLRVERAHG---RASSVDVYYGSHSSGSRSSGLYRRSTGYRVIVHGLPTS 119
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSY 180
ASWQDLKDHMRRAGDVCFSQV+R G G+VDYTSY+DMKYAIRKLD SEFRN FSRSY
Sbjct: 120 ASWQDLKDHMRRAGDVCFSQVYRKGSGTVGVVDYTSYEDMKYAIRKLDDSEFRNPFSRSY 179
Query: 181 VRVRE 185
+RVRE
Sbjct: 180 IRVRE 184
>gi|76573323|gb|ABA46766.1| pre-mRNA splicing factor-like protein [Solanum tuberosum]
Length = 269
Score = 256 bits (655), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 133/193 (68%), Positives = 153/193 (79%), Gaps = 7/193 (3%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SR++YVGNLP D + EVEDLFYKYG I+DI+LKIPPRPP Y F+EFE RDAED
Sbjct: 1 MSGRFSRSIYVGNLPADIKELEVEDLFYKYGRILDIELKIPPRPPCYCFVEFESSRDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMD-------RYSSYSSGGSRGVSRRSDYRVL 113
AIRGRDGYNFDG RLRVELAHGGR SSS D GG G+SR SDYRV+
Sbjct: 61 AIRGRDGYNFDGCRLRVELAHGGRGPSSSSDRRGSYGSSGGGGGGGGRHGISRHSDYRVI 120
Query: 114 VTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
+ GLPSSASWQDLKDHMR+AGDVCF++V RD G G+VDYT+Y+DMKYAIRKLD +EFR
Sbjct: 121 IRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYEDMKYAIRKLDDTEFR 180
Query: 174 NAFSRSYVRVREY 186
N ++R+Y+RVREY
Sbjct: 181 NPWTRTYIRVREY 193
>gi|224132592|ref|XP_002321360.1| predicted protein [Populus trichocarpa]
gi|222868356|gb|EEF05487.1| predicted protein [Populus trichocarpa]
Length = 240
Score = 256 bits (654), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 127/190 (66%), Positives = 155/190 (81%), Gaps = 3/190 (1%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SRT+YVGNLP D R E+EDLFYKYG I+D++LKIPPRPP Y F+EFE+ RDAED
Sbjct: 1 MSGRFSRTIYVGNLPADIRESEIEDLFYKYGRILDVELKIPPRPPCYCFVEFENARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSS---MDRYSSYSSGGSRGVSRRSDYRVLVTGL 117
AIRGRDGYNFDG RLRVELAHGGR SS+ SGG G+SR S++RV+V GL
Sbjct: 61 AIRGRDGYNFDGCRLRVELAHGGRGPSSNDRRGGYGGGGGSGGRFGISRHSEFRVIVRGL 120
Query: 118 PSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFS 177
PSSASWQDLKDHMR+AGDVCF++V RD G G+VDYT+++DMKYAIRKLD +EFRN ++
Sbjct: 121 PSSASWQDLKDHMRKAGDVCFAEVSRDSDGTFGVVDYTNHEDMKYAIRKLDDTEFRNPWA 180
Query: 178 RSYVRVREYD 187
R+Y+RV++++
Sbjct: 181 RAYIRVKQHE 190
>gi|363807302|ref|NP_001242110.1| uncharacterized protein LOC100786491 [Glycine max]
gi|255636783|gb|ACU18725.1| unknown [Glycine max]
Length = 267
Score = 256 bits (653), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 130/193 (67%), Positives = 155/193 (80%), Gaps = 6/193 (3%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SRT+YVGNLP D R E+EDLFYKYG I+DI+LK+PPRPP Y F+EF++ RDAED
Sbjct: 1 MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVEFDNARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSS------MDRYSSYSSGGSRGVSRRSDYRVLV 114
AIRGRDGYNFDG RLRVELAHGGR SSS + + GG G+SR S++RV+V
Sbjct: 61 AIRGRDGYNFDGCRLRVELAHGGRGPSSSDRRGYGGGGGNGGAGGGRFGISRHSEFRVIV 120
Query: 115 TGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRN 174
GLPSSASWQDLKDHMR+AGDVCF++V RD G GIVDYT+YDDMKYAIRKLD +EFRN
Sbjct: 121 RGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTLGIVDYTNYDDMKYAIRKLDDTEFRN 180
Query: 175 AFSRSYVRVREYD 187
++ +Y+RVR+Y+
Sbjct: 181 PWAIAYIRVRKYE 193
>gi|222618302|gb|EEE54434.1| hypothetical protein OsJ_01505 [Oryza sativa Japonica Group]
Length = 270
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 141/205 (68%), Positives = 153/205 (74%), Gaps = 25/205 (12%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R+SRT+YVGNLPGD R REVEDLFYK FED RDA+D
Sbjct: 72 MSRRNSRTIYVGNLPGDIREREVEDLFYK----------------------FEDPRDADD 109
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRDGYNFDGYRLRVELAHGGR S S DR SYSSG GVSRRS+YRV+VTGLPSS
Sbjct: 110 AICGRDGYNFDGYRLRVELAHGGRGQSYSYDRPRSYSSGRRGGVSRRSEYRVMVTGLPSS 169
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSY 180
ASWQDLKDHMRRAGDVCFS V+R+ G GIVDYT+Y+DMKYAIRKLD SEFRNAFSR+Y
Sbjct: 170 ASWQDLKDHMRRAGDVCFSDVYREAGATVGIVDYTTYEDMKYAIRKLDDSEFRNAFSRAY 229
Query: 181 VRVREYDSRRSYSRSPSRSPYYSRS 205
+RVRE SR SR+P SP RS
Sbjct: 230 IRVRESISR---SRTPVSSPSRGRS 251
>gi|224120944|ref|XP_002318458.1| predicted protein [Populus trichocarpa]
gi|222859131|gb|EEE96678.1| predicted protein [Populus trichocarpa]
Length = 280
Score = 253 bits (647), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 155/201 (77%), Gaps = 14/201 (6%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SRT+YVGNLP D R +VEDLFYKYG I+D++LKIPPRPP Y F+EFE+ RDAED
Sbjct: 1 MSGRFSRTIYVGNLPADIRESKVEDLFYKYGRILDVELKIPPRPPCYCFVEFENARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR--------------GVSR 106
AIRGRDGYNFDG RLRVELAHGGR SS+ R GG G+SR
Sbjct: 61 AIRGRDGYNFDGSRLRVELAHGGRGPSSNDRRGGYGGGGGGGGGGGGGGGGGGGRLGISR 120
Query: 107 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 166
S++RV+V GLPSSASWQDLKDHMR+AGDVCF++V RD G G+VDYT+++DMKYAIRK
Sbjct: 121 HSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDGDGTLGLVDYTNHEDMKYAIRK 180
Query: 167 LDRSEFRNAFSRSYVRVREYD 187
LD +EF+N ++R+Y+RV++Y+
Sbjct: 181 LDDTEFKNPWARAYIRVKQYE 201
>gi|448878372|gb|AGE46149.1| arginine/serine-rich splicing factor SR27 transcript II [Sorghum
bicolor]
Length = 165
Score = 250 bits (639), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 133/163 (81%), Positives = 143/163 (87%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R+SRT+YVGNLPGD R REVEDLFYKYG I+DIDLKIPPRPPGYAF+EFED RDA+D
Sbjct: 1 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GRDGYNFDGYRLRVELAHGGR S S DR SSYSS GVSRRSD+RV+VTGLPSS
Sbjct: 61 AIYGRDGYNFDGYRLRVELAHGGRGQSYSYDRSSSYSSARRGGVSRRSDFRVMVTGLPSS 120
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYA 163
ASWQDLKDHMRRAGDVCFS V+R+ G GIVDYT+YDDMKYA
Sbjct: 121 ASWQDLKDHMRRAGDVCFSDVYREAGETIGIVDYTNYDDMKYA 163
>gi|224128490|ref|XP_002320345.1| predicted protein [Populus trichocarpa]
gi|222861118|gb|EEE98660.1| predicted protein [Populus trichocarpa]
Length = 168
Score = 249 bits (637), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 133/167 (79%), Positives = 144/167 (86%), Gaps = 2/167 (1%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSR+SRTLYVGNLPGD R REVEDLFYKYGPI IDLKIPPRPPGYAF+EFE+ RDAED
Sbjct: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRH--SSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLP 118
AIRGRDGY+FDG+RLRVELAHGGR H S YS G GVSRRS+YRV+VTGLP
Sbjct: 61 AIRGRDGYDFDGHRLRVELAHGGRGHSSSDRHSSYSGSGGRGRGGVSRRSEYRVVVTGLP 120
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIR 165
SSASWQDLKDHMRRAGDVCFSQVFRD G TGIVDYT+Y+DMKYA++
Sbjct: 121 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYEDMKYAVK 167
>gi|30679138|ref|NP_849537.1| splicing factor SR1B [Arabidopsis thaliana]
gi|26451203|dbj|BAC42705.1| unknown protein [Arabidopsis thaliana]
gi|332656771|gb|AEE82171.1| splicing factor SR1B [Arabidopsis thaliana]
Length = 178
Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 128/176 (72%), Positives = 141/176 (80%), Gaps = 10/176 (5%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSRSSRT+YVGNLPGD R REVEDLF KYGP+V IDLKIPPRPPGYAF+EFED RDA+D
Sbjct: 1 MSSRSSRTIYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADD 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV----------SRRSDY 110
AI GRDGY+FDG+ LRVELAHGGRR S S G RG SRRS+Y
Sbjct: 61 AIYGRDGYDFDGHHLRVELAHGGRRSSHDARGSYSGRGRGGRGGGDGGGRERGPSRRSEY 120
Query: 111 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 166
RV+V+GLPSSASWQDLKDHMR+ G+VCFSQVFRD G TGIVDYTSY+DMKYAI+K
Sbjct: 121 RVVVSGLPSSASWQDLKDHMRKGGEVCFSQVFRDGRGTTGIVDYTSYEDMKYAIKK 176
>gi|3193304|gb|AAC19288.1| T14P8.21 [Arabidopsis thaliana]
gi|7269003|emb|CAB80736.1| AT4g02430 [Arabidopsis thaliana]
Length = 294
Score = 244 bits (623), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 127/175 (72%), Positives = 140/175 (80%), Gaps = 10/175 (5%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSRSSRT+YVGNLPGD R REVEDLF KYGP+V IDLKIPPRPPGYAF+EFED RDA+D
Sbjct: 1 MSSRSSRTIYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADD 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV----------SRRSDY 110
AI GRDGY+FDG+ LRVELAHGGRR S S G RG SRRS+Y
Sbjct: 61 AIYGRDGYDFDGHHLRVELAHGGRRSSHDARGSYSGRGRGGRGGGDGGGRERGPSRRSEY 120
Query: 111 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIR 165
RV+V+GLPSSASWQDLKDHMR+ G+VCFSQVFRD G TGIVDYTSY+DMKYA+R
Sbjct: 121 RVVVSGLPSSASWQDLKDHMRKGGEVCFSQVFRDGRGTTGIVDYTSYEDMKYAVR 175
>gi|218200241|gb|EEC82668.1| hypothetical protein OsI_27298 [Oryza sativa Indica Group]
Length = 321
Score = 241 bits (616), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 128/189 (67%), Positives = 144/189 (76%), Gaps = 19/189 (10%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SRT+YVGNLPGD R REVEDLFYKYG IVDIDLKIPPRPPG+AF+EFED RDAED
Sbjct: 67 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAED 126
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AIRGRDGYNFDG RLRVELAHGGR +SSS + +S G GVSR ++YRVLVTGLPSS
Sbjct: 127 AIRGRDGYNFDGNRLRVELAHGGRGNSSSFN--NSGGGGRRGGVSRHTEYRVLVTGLPSS 184
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSY 180
ASWQDLKDHMR AGDV T ++ IRKLD SEF+NAFS++Y
Sbjct: 185 ASWQDLKDHMRNAGDVV-----------------TLKCTVRVVIRKLDDSEFKNAFSKAY 227
Query: 181 VRVREYDSR 189
+RV+EYD +
Sbjct: 228 IRVKEYDGK 236
>gi|357442431|ref|XP_003591493.1| Serine/arginine-rich splicing factor [Medicago truncatula]
gi|355480541|gb|AES61744.1| Serine/arginine-rich splicing factor [Medicago truncatula]
Length = 390
Score = 238 bits (608), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 122/179 (68%), Positives = 138/179 (77%), Gaps = 1/179 (0%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS SRT+YVGNLPGD R REV+ LF KYG I IDLK+PPRPP YAF+ F+D +A+D
Sbjct: 54 MSRHLSRTVYVGNLPGDIREREVKHLFMKYGHITRIDLKVPPRPPCYAFVVFKDALNADD 113
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSG-GSRGVSRRSDYRVLVTGLPS 119
AI DGY+FDG RLRVE AH G +SSS DRYS +S+G G RGVS S+YRVLV LPS
Sbjct: 114 AICECDGYDFDGCRLRVEAAHVGYCNSSSRDRYSIHSNGQGGRGVSSHSEYRVLVNRLPS 173
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSR 178
SAS QDLKDHMR+AG VCFSQV D TGIVDYT+ DDMKYAI+ LD SEF+NAFSR
Sbjct: 174 SASCQDLKDHMRKAGAVCFSQVVHDGRVTTGIVDYTNCDDMKYAIKNLDGSEFQNAFSR 232
>gi|356516144|ref|XP_003526756.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Glycine max]
Length = 263
Score = 236 bits (603), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 154/260 (59%), Positives = 179/260 (68%), Gaps = 30/260 (11%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SRT+YVGNLP D R E+EDLFYKYG I+DI+LK+PPRPP Y F+EF++ RDAED
Sbjct: 1 MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVEFDNARDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRG------------VSRRS 108
AIRGRDGYNFDG RLRVELAHGGR SSS R GG G +SR S
Sbjct: 61 AIRGRDGYNFDGCRLRVELAHGGRGPSSSDRRGYGGGGGGGGGGGGSGAGGGRFGISRHS 120
Query: 109 DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLD 168
++RV+V GLPSSASWQDLKDHMR+AGDVCF++V RD G GIVDYT+YDDMKYAIRKLD
Sbjct: 121 EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLD 180
Query: 169 RSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRS 228
+EFRN ++R+Y+RVR+Y+S RS S S S S S R RS RS S SRS
Sbjct: 181 DTEFRNPWARAYIRVRKYESSRSRSHSRSPSRSRSPKRVRSRSLERSVSRSRS------- 233
Query: 229 RSYSPRGKYSRRSPSLSPAR 248
RS S+SP +
Sbjct: 234 -----------RSRSVSPIK 242
>gi|6561944|emb|CAB62448.1| PRE-MRNA SPLICING FACTOR SF2-like protein [Arabidopsis thaliana]
Length = 243
Score = 234 bits (596), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 134/179 (74%), Gaps = 12/179 (6%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SR++YVGNLPGD R E+ED+FYKYG IVDI+LK+PPRPP Y F+EFE RDAED
Sbjct: 1 MSGRFSRSIYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR------------GVSRRS 108
AI+GRDGYN DG RLRVELAHGGR SSS R G GVSR S
Sbjct: 61 AIKGRDGYNLDGCRLRVELAHGGRGQSSSDRRGGYGGGGSGYGGGGGGGGSARFGVSRHS 120
Query: 109 DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKL 167
++RV+V GLPSSASWQDLKDHMR+AGDVCF++V RD G G+VDYT+YDDMKYA+R L
Sbjct: 121 EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAVRNL 179
>gi|449456443|ref|XP_004145959.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor SF2-like
[Cucumis sativus]
Length = 248
Score = 226 bits (577), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 122/189 (64%), Positives = 142/189 (75%), Gaps = 8/189 (4%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSR SRT+YVGNLP D + E+EDLFYKYG I+DI+LKIPPRPP Y F+EFE RDAED
Sbjct: 1 MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSR--RSDYRVLVTGLP 118
AIR RDGYNFDG RLRVELAHGGR SSS DR SSY GG G DY ++ L
Sbjct: 61 AIRARDGYNFDGCRLRVELAHGGRGPSSS-DRRSSYGGGGGGGGQGFLLLDYVDMMNLLE 119
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSR 178
+DHMR+AGDVCF++V RD G GIVDYT+YDDMKYAIRKLD +EFRN ++R
Sbjct: 120 XC-----FQDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWAR 174
Query: 179 SYVRVREYD 187
+Y+RV++YD
Sbjct: 175 AYIRVKKYD 183
>gi|51854465|gb|AAU10844.1| putative SF2/ASF splicing modulator Srp30 [Oryza sativa Japonica
Group]
Length = 145
Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 117/147 (79%), Positives = 129/147 (87%), Gaps = 2/147 (1%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R+SRT+YVGNLPGD R REVEDLFYKYG IVDIDLKIPPRPPGYAF+EFED RDA+D
Sbjct: 1 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQD 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GR GY+FDG+RLRVELAHGGR S DR SSYSS G RG ++R+DYRV+VTGLPSS
Sbjct: 61 AIYGRHGYDFDGHRLRVELAHGGR--GPSFDRSSSYSSAGRRGAAKRTDYRVMVTGLPSS 118
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGG 147
ASWQDLKDHMRRAGDVCFS V+R+ GG
Sbjct: 119 ASWQDLKDHMRRAGDVCFSDVYREGGG 145
>gi|54291866|gb|AAV32234.1| putative pre-mRNA splicing factor SF2 [Oryza sativa Japonica Group]
Length = 151
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 113/139 (81%), Positives = 123/139 (88%), Gaps = 2/139 (1%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R+SRT+YVGNLPGD R REVEDLFYKYG IVDIDLKIPPRPPGYAF+EFED RDA+D
Sbjct: 1 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQD 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GR GY+FDG+RLRVELAHGGR S DR SSYSS G RG ++R+DYRV+VTGLPSS
Sbjct: 61 AIYGRHGYDFDGHRLRVELAHGGR--GPSFDRSSSYSSAGRRGAAKRTDYRVMVTGLPSS 118
Query: 121 ASWQDLKDHMRRAGDVCFS 139
ASWQDLKDHMRRAGDVCFS
Sbjct: 119 ASWQDLKDHMRRAGDVCFS 137
>gi|115436242|ref|NP_001042879.1| Os01g0316600 [Oryza sativa Japonica Group]
gi|113532410|dbj|BAF04793.1| Os01g0316600, partial [Oryza sativa Japonica Group]
Length = 178
Score = 217 bits (552), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 110/136 (80%), Positives = 119/136 (87%)
Query: 52 FEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYR 111
FED RDA+DAI GRDGYNFDGYRLRVELAHGGR S S DR SYSSG GVSRRS+YR
Sbjct: 1 FEDPRDADDAICGRDGYNFDGYRLRVELAHGGRGQSYSYDRPRSYSSGRRGGVSRRSEYR 60
Query: 112 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSE 171
V+VTGLPSSASWQDLKDHMRRAGDVCFS V+R+ G GIVDYT+Y+DMKYAIRKLD SE
Sbjct: 61 VMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREAGATVGIVDYTTYEDMKYAIRKLDDSE 120
Query: 172 FRNAFSRSYVRVREYD 187
FRNAFSR+Y+RVREYD
Sbjct: 121 FRNAFSRAYIRVREYD 136
>gi|52140007|gb|AAU29330.1| ASF/SF2-like pre-mRNA splicing factor SRP32'' [Zea mays]
Length = 150
Score = 216 bits (551), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 114/149 (76%), Positives = 126/149 (84%), Gaps = 2/149 (1%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SRT+YVGNLPGD R REVEDLFYKYG IVDIDLK+PPRPPGYAF+EFED RDAE+
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGKIVDIDLKVPPRPPGYAFVEFEDPRDAEE 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMD--RYSSYSSGGSRGVSRRSDYRVLVTGLP 118
AI GRDGYNFDG+RLRVE AHGGR ++SS D G RGVSR S+YRVLVTGLP
Sbjct: 61 AIAGRDGYNFDGHRLRVEAAHGGRGNASSHDRSSGFGGGGGARRGVSRHSEYRVLVTGLP 120
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRGG 147
SSASWQDLKDHMR+AGDVCFS+V+R+ GG
Sbjct: 121 SSASWQDLKDHMRKAGDVCFSEVYREGGG 149
>gi|147788227|emb|CAN71592.1| hypothetical protein VITISV_015931 [Vitis vinifera]
Length = 267
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 136/234 (58%), Positives = 161/234 (68%), Gaps = 18/234 (7%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS R SRT+YVGNLP D R E+EDLFYKYG I+D++LKIPPRPP Y F+EFE+ RDAED
Sbjct: 1 MSGRFSRTIYVGNLPSDIREYEIEDLFYKYGRILDVELKIPPRPPCYCFVEFENSRDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMD--RYSSYSSGGSRGVSRRSDYRVLVTGLP 118
AIRGRDGYNFDG RLRVELAHGGR SSS D GG GVSR S+YR G
Sbjct: 61 AIRGRDGYNFDGCRLRVELAHGGRGQSSSSDRRGGHGSGGGGRFGVSRHSEYR----GAY 116
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYA---------IRKLDR 169
+ DHMR+AGDVCF++V RD G G+VDYT+++DMKYA IRKLD
Sbjct: 117 EIGRYCWNLDHMRKAGDVCFAEVSRDADGTFGLVDYTNHEDMKYAQLTCSSLSQIRKLDD 176
Query: 170 SEFRNAFSRSYVRVREYD---SRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSR 220
+EFRN ++R+Y+RV+ YD RS S SPSRS R+RS+S S SRS S+
Sbjct: 177 TEFRNPWARAYIRVKRYDVSPRSRSRSHSPSRSRSLKRNRSKSLERSVSRSASK 230
>gi|227206256|dbj|BAH57183.1| AT4G02430 [Arabidopsis thaliana]
Length = 176
Score = 204 bits (518), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 109/171 (63%), Positives = 127/171 (74%), Gaps = 11/171 (6%)
Query: 7 RTLYVGNLPGDTRMREVEDLFY-KYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
R ++ L G + ++ LF+ KYGP+V IDLKIPPRPPGYAF+EFED RDA+DAI GR
Sbjct: 4 RNCWILILFGRSFLKNCSSLFFLKYGPVVQIDLKIPPRPPGYAFVEFEDARDADDAIYGR 63
Query: 66 DGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV----------SRRSDYRVLVT 115
DGY+FDG+ LRVELAHGGRR S S G RG SRRS+YRV+V+
Sbjct: 64 DGYDFDGHHLRVELAHGGRRSSHDARGSYSGRGRGGRGGGDGGGRERGPSRRSEYRVVVS 123
Query: 116 GLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 166
GLPSSASWQDLKDHMR+ G+VCFSQVFRD G TGIVDYTSY+DMKYAI+K
Sbjct: 124 GLPSSASWQDLKDHMRKGGEVCFSQVFRDGRGTTGIVDYTSYEDMKYAIKK 174
>gi|256092018|ref|XP_002581797.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
Length = 194
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 115/199 (57%), Positives = 141/199 (70%), Gaps = 12/199 (6%)
Query: 3 SRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPR-PPGYAFLEFEDYRDAEDA 61
SR++ +YVGNLP DT+ R++E+LF KYGPI IDLK R P +AF+EFED DA DA
Sbjct: 6 SRTTHKIYVGNLPPDTKTRDIENLFSKYGPIAAIDLKAGQRRGPPFAFVEFEDELDASDA 65
Query: 62 IRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSA 121
+RGRDGYNFDGY LRVEL G +R + GG+ G SRRSD+RV+VTGLP +
Sbjct: 66 VRGRDGYNFDGYALRVELPRTG-----VPERRFNRGGGGASGPSRRSDFRVIVTGLPPTG 120
Query: 122 SWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSY 180
SWQDLKDHMR AGDV ++ VFRD TG+V++ Y+DMKYAIR+LD S+FR + SY
Sbjct: 121 SWQDLKDHMREAGDVGYADVFRD---GTGVVEFLRYEDMKYAIRRLDDSKFRSHEGESSY 177
Query: 181 VRVREYDSRRSYSRSPSRS 199
+RVRE R SRS SRS
Sbjct: 178 IRVRE--ERAGGSRSRSRS 194
>gi|307103808|gb|EFN52065.1| hypothetical protein CHLNCDRAFT_36976 [Chlorella variabilis]
Length = 302
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 100/177 (56%), Positives = 122/177 (68%), Gaps = 5/177 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R REVEDLF KYG +V ID+K P RPP +AF+EF D RDAEDA+RGRDGY
Sbjct: 12 VYVGNLPDDIREREVEDLFSKYGKVVSIDMKAPVRPPAFAFVEFADPRDAEDAVRGRDGY 71
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
+F G RLRVELA G R++ +RVLV GLP SASWQDLKD
Sbjct: 72 DFYGNRLRVELAKGAGGRGR-----GFGGGPPPGFRPRQTGFRVLVKGLPMSASWQDLKD 126
Query: 129 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVRE 185
H+R+ ++ VFRDR G+TG+V++ + DDM+ IRKLD +EFRN F R+YVRV E
Sbjct: 127 HVRQVCKPAYTNVFRDRDGVTGVVEFETADDMERTIRKLDDTEFRNPFDRAYVRVVE 183
>gi|302847745|ref|XP_002955406.1| hypothetical protein VOLCADRAFT_45192 [Volvox carteri f.
nagariensis]
gi|300259248|gb|EFJ43477.1| hypothetical protein VOLCADRAFT_45192 [Volvox carteri f.
nagariensis]
Length = 245
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 104/181 (57%), Positives = 124/181 (68%), Gaps = 13/181 (7%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VGNLP D R REVEDLF+KYG I +DLKI PRPP +AF+EFED RDA DA+RGRDG
Sbjct: 1 VFVGNLPMDVREREVEDLFFKYGRIRSVDLKIGPRPPAFAFVEFEDQRDAYDAVRGRDGI 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR-------------GVSRRSDYRVLVT 115
F G RLRVE++HG R G G SRR+DYRV+VT
Sbjct: 61 EFQGQRLRVEISHGRRGGFGGGGGGGGGGGYGGGGGGGYGGGGPNPYGPSRRTDYRVIVT 120
Query: 116 GLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNA 175
GLP S+SWQDLKDHMRRAG+V FSQV RD GM G++DY + +DM+ A+RKLD SEFRN
Sbjct: 121 GLPISSSWQDLKDHMRRAGEVTFSQVMRDGRGMLGLIDYATREDMETALRKLDGSEFRNP 180
Query: 176 F 176
+
Sbjct: 181 Y 181
>gi|301116808|ref|XP_002906132.1| pre-mRNA-splicing factor SF2 [Phytophthora infestans T30-4]
gi|262107481|gb|EEY65533.1| pre-mRNA-splicing factor SF2 [Phytophthora infestans T30-4]
Length = 297
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 104/178 (58%), Positives = 129/178 (72%), Gaps = 7/178 (3%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R REVED+FYKYG I DID+K P RPP +AF++FED RDAEDAIRGRDGY
Sbjct: 6 VYVGNLPMDIRTREVEDIFYKYGRIRDIDVKFPSRPPAFAFVDFEDARDAEDAIRGRDGY 65
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGG-SRGVSRRSDYRVLVTGLPSSASWQDLK 127
++DG RLRVE A+GGRR S+ R S+ S R + ++ V V+ LP SWQDLK
Sbjct: 66 DYDGARLRVEAANGGRRESA---RDSARGSARYPRNIRGNGEFTVEVSNLPPRVSWQDLK 122
Query: 128 DHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVRE 185
D MR+AGDV F++V RGG G+V+Y++ DMKYA+ KLD +EFR SYVRVR+
Sbjct: 123 DFMRKAGDVTFTEV-DGRGG--GVVEYSNKRDMKYAVEKLDDTEFRGRSENSYVRVRQ 177
>gi|312088410|ref|XP_003145851.1| arginine/serine-rich splicing factor 3 [Loa loa]
gi|307758983|gb|EFO18217.1| arginine/serine-rich splicing factor 3 [Loa loa]
Length = 228
Score = 194 bits (492), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 122/237 (51%), Positives = 156/237 (65%), Gaps = 23/237 (9%)
Query: 3 SRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAI 62
SR SR +YVGNLP R ++VED+F KYG ++ +DLK R P +AF+EFED RDAEDA+
Sbjct: 2 SRESR-IYVGNLPTTVRAKDVEDIFSKYGKVLYVDLK-DRRQPYFAFVEFEDARDAEDAV 59
Query: 63 RGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSR------------RSDY 110
RGRDGY+++GYRLRVE G Y +G + +SR R++Y
Sbjct: 60 RGRDGYDYEGYRLRVEFPRGLGPRGPGG---RPYDTGRNLSLSRNASGGGSSSGGRRANY 116
Query: 111 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRS 170
RV+V+GLP+S SWQDLKDHMR AGDVC++ V RD TGIV+Y Y+DMKYA+RKLD +
Sbjct: 117 RVIVSGLPASGSWQDLKDHMREAGDVCYTDVLRD---GTGIVEYGRYEDMKYALRKLDDT 173
Query: 171 EFR-NAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSP 226
+F+ + SY+RVRE D+ S + S SRSP SR SP YS S S S S S+SP
Sbjct: 174 KFKSHEGETSYIRVRE-DNGESRAHSRSRSPVGRASRG-SPQYSPSYSNSGSHSHSP 228
>gi|325190523|emb|CCA25022.1| premRNAsplicing factor SF2 putative [Albugo laibachii Nc14]
Length = 303
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 97/181 (53%), Positives = 127/181 (70%), Gaps = 13/181 (7%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
S+ +YVGNLP R REVEDLFYK+G I DIDLK+P RPP YAF++FED RDAEDAI R
Sbjct: 2 SKRIYVGNLPMSIRTREVEDLFYKHGKIQDIDLKLPLRPPAYAFIDFEDARDAEDAIEAR 61
Query: 66 DGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQD 125
DGY ++G RLRVE R + ++++ S+G + V VT LPS SWQD
Sbjct: 62 DGYKYEGQRLRVE-----RANPKNIEKEKHVRGSRSKGSN-----TVKVTNLPSRVSWQD 111
Query: 126 LKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVRE 185
LKD MR+AG+V F+++ D+ G GIVD+ +DDMKYAI++LD ++FRN F R+YVRV++
Sbjct: 112 LKDFMRKAGEVTFAKI--DKHG-DGIVDFKHHDDMKYAIKRLDDTKFRNRFDRAYVRVKQ 168
Query: 186 Y 186
Sbjct: 169 L 169
>gi|348687956|gb|EGZ27770.1| hypothetical protein PHYSODRAFT_246920 [Phytophthora sojae]
Length = 838
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 106/178 (59%), Positives = 126/178 (70%), Gaps = 12/178 (6%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R REVED+FYKYG I DID+K P RPP +AF++FED RDAEDAIRGRDGY
Sbjct: 533 VYVGNLPMDIRTREVEDIFYKYGRIRDIDVKFPSRPPAFAFVDFEDPRDAEDAIRGRDGY 592
Query: 69 NFDGYRLRVELAHGGRRHSS--SMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDL 126
++DG RLRVE A+GGRR S+ RY R + DY V ++ LP SWQDL
Sbjct: 593 DYDGARLRVEPANGGRRESAPRGSGRY-------PRNIRGTGDYTVEISNLPPRVSWQDL 645
Query: 127 KDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVR 184
KD MR+AGDV F++V RGG GIV+Y++ DMKYA+ KLD SEFR SYVRVR
Sbjct: 646 KDFMRKAGDVVFTEV-DGRGG--GIVEYSNKRDMKYAVEKLDDSEFRGRSENSYVRVR 700
>gi|66548276|ref|XP_393525.2| PREDICTED: serine/arginine-rich splicing factor 1-like [Apis
mellifera]
Length = 248
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 119/247 (48%), Positives = 153/247 (61%), Gaps = 35/247 (14%)
Query: 2 SSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDA 61
R+ +YVGNLP D R ++++DLFYK+G ++ +DLK PP +AF+EF+D RDAEDA
Sbjct: 4 GGRNECRIYVGNLPPDIRTKDIQDLFYKFGKVIFVDLKNRRGPP-FAFVEFDDPRDAEDA 62
Query: 62 IRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSG-GSRGV----------SRRSDY 110
+ RDGY++DGYRLRVE GG ++ + SG G RG +RRS Y
Sbjct: 63 VHARDGYDYDGYRLRVEFPRGGGPSNNFRGGRGAGDSGRGGRGEMSNSRGRGPPARRSQY 122
Query: 111 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRS 170
RVLVTGLP S SWQDLKDHMR AGDVCF+ VF+D TG+V++ Y+DMKYA++KLD S
Sbjct: 123 RVLVTGLPPSGSWQDLKDHMREAGDVCFADVFKD---GTGVVEFLRYEDMKYAVKKLDDS 179
Query: 171 EFRNAFSR-SYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSR 229
FR+ +Y+RV+E + S R RS R RS SR SYSPR R
Sbjct: 180 RFRSHEGEVAYIRVKE--------------DHNSGDRGRSEDRERGRSHSR--SYSPRRR 223
Query: 230 ---SYSP 233
+YSP
Sbjct: 224 GSPTYSP 230
>gi|350646485|emb|CCD58884.1| arginine/serine-rich splicing factor, putative [Schistosoma
mansoni]
Length = 207
Score = 190 bits (483), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 106/185 (57%), Positives = 131/185 (70%), Gaps = 14/185 (7%)
Query: 3 SRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPR-PPGYAFLEFEDYRDAEDA 61
SR++ +YVGNLP DT+ R++E+LF KYGPI IDLK R P +AF+EFED DA DA
Sbjct: 2 SRTTHKIYVGNLPPDTKTRDIENLFSKYGPIAAIDLKAGQRRGPPFAFVEFEDELDASDA 61
Query: 62 IRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSA 121
+RGRDGYNFDGY LRVEL G + G+ G SRRSD+RV+VTGLP +
Sbjct: 62 VRGRDGYNFDGYALRVELPRTGGFNRGGG---------GASGPSRRSDFRVIVTGLPPTG 112
Query: 122 SWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSY 180
SWQDLKDHMR AGDV ++ VFRD TG+V++ Y+DMKYAIR+LD S+FR + SY
Sbjct: 113 SWQDLKDHMREAGDVGYADVFRD---GTGVVEFLRYEDMKYAIRRLDDSKFRSHEGESSY 169
Query: 181 VRVRE 185
+RVRE
Sbjct: 170 IRVRE 174
>gi|383848005|ref|XP_003699643.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Megachile
rotundata]
Length = 248
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 110/221 (49%), Positives = 143/221 (64%), Gaps = 16/221 (7%)
Query: 2 SSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDA 61
R+ +YVGNLP D R ++++DLFYK+G ++ +DLK PP +AF+EF+D RDAEDA
Sbjct: 4 GGRNECRIYVGNLPPDIRTKDIQDLFYKFGKVIFVDLKNRRGPP-FAFVEFDDPRDAEDA 62
Query: 62 IRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSG-GSRGV----------SRRSDY 110
+ RDGY++DGYRLRVE GG ++ + SG G RG +RRS Y
Sbjct: 63 VHARDGYDYDGYRLRVEFPRGGGPSNNFRGGRGAGDSGRGGRGEMSNSRGRGPPARRSQY 122
Query: 111 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRS 170
RVLVTGLP S SWQDLKDHMR AGDVCF+ V++D TG+V++ Y+DMKYA++KLD S
Sbjct: 123 RVLVTGLPPSGSWQDLKDHMREAGDVCFADVYKD---GTGVVEFLRYEDMKYAVKKLDDS 179
Query: 171 EFRNAFSR-SYVRVREYDSRRSYSRSPSRSPYYSRSRSRSP 210
FR+ +Y+RV+E S RS R S SRS SP
Sbjct: 180 RFRSHEGEVAYIRVKEDHSSGDRGRSEDRERGRSHSRSYSP 220
>gi|340726341|ref|XP_003401518.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Bombus
terrestris]
gi|350423930|ref|XP_003493634.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Bombus
impatiens]
Length = 248
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 118/247 (47%), Positives = 153/247 (61%), Gaps = 35/247 (14%)
Query: 2 SSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDA 61
R+ +YVGNLP D R ++++DLFYK+G ++ +DLK PP +AF+EF+D RDAEDA
Sbjct: 4 GGRNECRIYVGNLPPDIRTKDIQDLFYKFGKVIFVDLKNRRGPP-FAFVEFDDPRDAEDA 62
Query: 62 IRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSG-GSRGV----------SRRSDY 110
+ RDGY++DGYRLRVE GG ++ + SG G RG +RRS Y
Sbjct: 63 VHARDGYDYDGYRLRVEFPRGGGPSNNFRGGRGAGDSGRGGRGEMSNSRGRGPPARRSQY 122
Query: 111 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRS 170
RVLVTGLP S SWQDLKDHMR AGDVCF+ V++D TG+V++ Y+DMKYA++KLD S
Sbjct: 123 RVLVTGLPPSGSWQDLKDHMREAGDVCFADVYKD---GTGVVEFLRYEDMKYAVKKLDDS 179
Query: 171 EFR-NAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSR 229
FR + +Y+RV+E + S R RS R RS SR SYSPR R
Sbjct: 180 RFRSHEGEVAYIRVKE--------------DHNSGDRGRSEDRERGRSHSR--SYSPRRR 223
Query: 230 ---SYSP 233
+YSP
Sbjct: 224 GSPTYSP 230
>gi|380024306|ref|XP_003695942.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 1-like [Apis florea]
Length = 248
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 118/247 (47%), Positives = 152/247 (61%), Gaps = 35/247 (14%)
Query: 2 SSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDA 61
R+ +YVGNLP D R ++++DLFYK+G ++ +DLK PP +AF+EF+D RDAEDA
Sbjct: 4 GGRNECRIYVGNLPPDIRTKDIQDLFYKFGKVIFVDLKNRRGPP-FAFVEFDDPRDAEDA 62
Query: 62 IRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSG-GSRGV----------SRRSDY 110
+ RDGY++DGYRLRVE GG ++ + SG G RG +RRS Y
Sbjct: 63 VHARDGYDYDGYRLRVEFPRGGGPSNNFRGGRGAGDSGRGGRGEMSNSRGRGPPARRSQY 122
Query: 111 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRS 170
RVLVTGLP S SWQDLKDHMR AGDVCF+ VF+D TG+V++ Y+DMKYA++K D S
Sbjct: 123 RVLVTGLPPSGSWQDLKDHMREAGDVCFADVFKD---GTGVVEFLRYEDMKYAVKKXDDS 179
Query: 171 EFR-NAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSR 229
FR + +Y+RV+E + S R RS R RS SR SYSPR R
Sbjct: 180 RFRSHEGEVAYIRVKE--------------DHNSGDRGRSEDRERGRSHSR--SYSPRRR 223
Query: 230 ---SYSP 233
+YSP
Sbjct: 224 GSPTYSP 230
>gi|357631525|gb|EHJ78995.1| hypothetical protein KGM_15683 [Danaus plexippus]
Length = 249
Score = 187 bits (476), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 151/230 (65%), Gaps = 19/230 (8%)
Query: 3 SRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAI 62
SR+ +YVGNLP D R ++++DLFYK+G + +DLK PP +AF+EFED RDA+DA+
Sbjct: 8 SRNECRIYVGNLPPDIRTKDIQDLFYKFGKVTFVDLKNRKGPP-FAFVEFEDPRDADDAV 66
Query: 63 RGRDGYNFDGYRLRVEL----AHGGRRHSSSMDRYSSYSSGGSRGV-SRRSDYRVLVTGL 117
R RDGY++DGYRLRVE G R S DR+ + +RG +RRS+YRVLVTGL
Sbjct: 67 RARDGYDYDGYRLRVEFPRGGGGGARGGRSQPDRFGPRPA--ARGPPARRSEYRVLVTGL 124
Query: 118 PSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAF 176
P S SWQDLKDHMR AGDVCF+ F+D TG+V++ ++DMKYA++KLD S FR +
Sbjct: 125 PPSGSWQDLKDHMREAGDVCFADTFKD---GTGVVEFLRHEDMKYAVKKLDDSRFRSHEG 181
Query: 177 SRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSP 226
SY+RV+E RSP Y ++ SP Y+R SP SYSP
Sbjct: 182 EVSYIRVKEDYGSGGGGGLRDRSPEY---QAGSPSYTRRGSP----SYSP 224
>gi|157113456|ref|XP_001657837.1| arginine/serine-rich splicing factor [Aedes aegypti]
gi|108877724|gb|EAT41949.1| AAEL006473-PA [Aedes aegypti]
Length = 237
Score = 187 bits (475), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 101/191 (52%), Positives = 137/191 (71%), Gaps = 13/191 (6%)
Query: 4 RSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIR 63
R+ +YVGNLP D R ++++DLF+K+G + +DLK PP +AF+EFED RDA+DA++
Sbjct: 5 RNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADDAVK 63
Query: 64 GRDGYNFDGYRLRVELAHGGR--RHSSSMDRYSSYSSGGSRG------VSRRSDYRVLVT 115
RDGY++DGYRLRVE GG R+SSS +S GG+R +RRS +RV+VT
Sbjct: 64 ARDGYDYDGYRLRVEFPRGGGPGRYSSSSRGGNSDRGGGARDRGNRGPPARRSQFRVMVT 123
Query: 116 GLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-N 174
GLP+S SWQDLKDHMR AGDVCF+ V++D TG+V++ ++DMKYAI+KLD S FR +
Sbjct: 124 GLPASGSWQDLKDHMREAGDVCFADVYKD---GTGVVEFLRHEDMKYAIKKLDDSRFRSH 180
Query: 175 AFSRSYVRVRE 185
+Y+RVRE
Sbjct: 181 EGEVAYIRVRE 191
>gi|170588713|ref|XP_001899118.1| SF2 [Brugia malayi]
gi|158593331|gb|EDP31926.1| SF2, putative [Brugia malayi]
Length = 228
Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 124/234 (52%), Positives = 156/234 (66%), Gaps = 17/234 (7%)
Query: 3 SRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAI 62
SR SR +YVGNLP R ++VED+F KYG ++ +DLK R P +AF+EFED RDAEDA+
Sbjct: 2 SRESR-IYVGNLPTTVRAKDVEDIFSKYGRVLYVDLK-DRRQPYFAFVEFEDARDAEDAV 59
Query: 63 RGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSS---------YSSGGSRGVSRRSDYRVL 113
RGRDGY+++GYRLRVE G Y S GGS SRR++YRV+
Sbjct: 60 RGRDGYDYEGYRLRVEFPRGLGPRGPGGRPYDSGRNLSVSRSAGGGGSSSGSRRANYRVI 119
Query: 114 VTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
V+GLP+S SWQDLKDHMR AGDVC++ V RD TGIV+Y Y+DMKYA+RKLD ++F+
Sbjct: 120 VSGLPASGSWQDLKDHMREAGDVCYTDVLRD---GTGIVEYGRYEDMKYALRKLDDTKFK 176
Query: 174 -NAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSP 226
+ SY+RV+E D+ S + S SRSP SR SP YS S S S S S+SP
Sbjct: 177 SHEGETSYIRVKE-DNGESRAHSRSRSPVGRASRG-SPQYSPSYSNSGSHSHSP 228
>gi|289739445|gb|ADD18470.1| alternative splicing factor ASF/SF2 [Glossina morsitans morsitans]
Length = 236
Score = 187 bits (474), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 99/194 (51%), Positives = 133/194 (68%), Gaps = 13/194 (6%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M SR+ +YVGNLP D R ++++DLF+K+G + +DLK PP +AF+EFED RDA+D
Sbjct: 1 MGSRNESRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADD 59
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--------SRRSDYRV 112
A++ RDGY++DGYRLRVE GG R+ +R + + G ++RS YRV
Sbjct: 60 AVKARDGYDYDGYRLRVEFPRGGGRNEHRNNRGNERGNQREGGRGGGGRGPPTKRSQYRV 119
Query: 113 LVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
LVTGLPSS SWQDLKDHMR AGDVCF+ ++D TG+V++ ++DMKYAI+KLD S F
Sbjct: 120 LVTGLPSSGSWQDLKDHMREAGDVCFADTYKD---GTGVVEFLRHEDMKYAIKKLDDSRF 176
Query: 173 R-NAFSRSYVRVRE 185
R + Y+RVRE
Sbjct: 177 RSHEGEVGYIRVRE 190
>gi|21954085|gb|AAK93589.2| putative SF2/ASF splicing modulator Srp30 protein [Arabidopsis
thaliana]
Length = 207
Score = 187 bits (474), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 102/135 (75%), Positives = 115/135 (85%), Gaps = 2/135 (1%)
Query: 62 IRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSA 121
I GRDGY+FDG RLRVE+AHGGRR S S+DRYSS S SRRSDY VLVTGLP SA
Sbjct: 1 IYGRDGYDFDGCRLRVEIAHGGRRFSPSVDRYSSSYSASRAP-SRRSDYHVLVTGLPPSA 59
Query: 122 SWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYV 181
SWQDLKDHMR+AGDVCFS+VF DR GM+G+VDY++YDDMKYAIRKLD +EFRNAFS +Y+
Sbjct: 60 SWQDLKDHMRKAGDVCFSEVFPDRKGMSGVVDYSNYDDMKYAIRKLDATEFRNAFSSAYI 119
Query: 182 RVREYDSRRSYSRSP 196
RVREY+S RS SRSP
Sbjct: 120 RVREYES-RSVSRSP 133
>gi|427777641|gb|JAA54272.1| Putative sf2 [Rhipicephalus pulchellus]
Length = 223
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 105/188 (55%), Positives = 131/188 (69%), Gaps = 13/188 (6%)
Query: 1 MSSRSSRT-LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAE 59
MS R + +YVGNLP D R +++EDLFYK+G I IDLK PP +AF+EF+D RDAE
Sbjct: 1 MSFRGNECRIYVGNLPPDIRSKDIEDLFYKFGKITFIDLKNRRGPP-FAFVEFDDPRDAE 59
Query: 60 DAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV-SRRSDYRVLVTGLP 118
DA++ RDGY++DGYRLRVE G SM G RG +RRS YRVLV+GLP
Sbjct: 60 DAVQARDGYDYDGYRLRVEFPRGSAPGRGSM------GPGRGRGPPARRSQYRVLVSGLP 113
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFS 177
S SWQDLKDHMR AGDVC++ VF+D TG+V++ Y+DMKYA++KLD S FR +
Sbjct: 114 PSGSWQDLKDHMREAGDVCYADVFKD---GTGVVEFLRYEDMKYAVKKLDDSRFRSHEGE 170
Query: 178 RSYVRVRE 185
SY+RVRE
Sbjct: 171 VSYIRVRE 178
>gi|346471975|gb|AEO35832.1| hypothetical protein [Amblyomma maculatum]
Length = 223
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 105/188 (55%), Positives = 130/188 (69%), Gaps = 13/188 (6%)
Query: 1 MSSRSSRT-LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAE 59
MS R + +YVGNLP D R +++EDLFYK+G I IDLK PP +AF+EF+D RDAE
Sbjct: 1 MSFRGNECRIYVGNLPPDIRSKDIEDLFYKFGKITFIDLKNRRGPP-FAFVEFDDPRDAE 59
Query: 60 DAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV-SRRSDYRVLVTGLP 118
DA+ RDGY++DGYRLRVE G SM G RG +RRS YRVLV+GLP
Sbjct: 60 DAVHARDGYDYDGYRLRVEFPRGSAPGRGSM------GPGRGRGPPARRSQYRVLVSGLP 113
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFS 177
S SWQDLKDHMR AGDVC++ VF+D TG+V++ Y+DMKYA++KLD S FR +
Sbjct: 114 PSGSWQDLKDHMREAGDVCYADVFKD---GTGVVEFLRYEDMKYAVKKLDDSRFRSHEGE 170
Query: 178 RSYVRVRE 185
SY+RVRE
Sbjct: 171 VSYIRVRE 178
>gi|325303176|tpg|DAA34416.1| TPA_inf: alternative splicing factor ASF/SF2 [Amblyomma variegatum]
Length = 222
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 105/188 (55%), Positives = 130/188 (69%), Gaps = 13/188 (6%)
Query: 1 MSSRSSRT-LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAE 59
MS R + +YVGNLP D R +++EDLFYK+G I IDLK PP +AF+EF+D RDAE
Sbjct: 1 MSFRGNECRIYVGNLPPDIRSKDIEDLFYKFGKITFIDLKNRRGPP-FAFVEFDDPRDAE 59
Query: 60 DAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV-SRRSDYRVLVTGLP 118
DA+ RDGY++DGYRLRVE G SM G RG +RRS YRVLV+GLP
Sbjct: 60 DAVHARDGYDYDGYRLRVEFPRGSAPGRGSM------GPGRGRGPPARRSQYRVLVSGLP 113
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFS 177
S SWQDLKDHMR AGDVC++ VF+D TG+V++ Y+DMKYA++KLD S FR +
Sbjct: 114 PSGSWQDLKDHMREAGDVCYADVFKD---GTGVVEFLRYEDMKYAVKKLDDSRFRSHEGE 170
Query: 178 RSYVRVRE 185
SY+RVRE
Sbjct: 171 VSYIRVRE 178
>gi|391330558|ref|XP_003739725.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Metaseiulus
occidentalis]
Length = 217
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 104/189 (55%), Positives = 134/189 (70%), Gaps = 17/189 (8%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS ++ +YVGNLP D R +++EDLF+KYG I IDLK PP +AF+EFED RDAED
Sbjct: 1 MSYKAESRVYVGNLPPDIRTKDIEDLFHKYGKITFIDLKNRRGPP-FAFVEFEDPRDAED 59
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRG---VSRRSDYRVLVTGL 117
A+ RDGY++DGY+LRVE G +S+ R G SRG +RRS YRV+VTGL
Sbjct: 60 AVSARDGYDYDGYKLRVEFPRG----NSARPR-----GGPSRGRGPPARRSQYRVIVTGL 110
Query: 118 PSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFS 177
P + SWQDLKDHMR AGDVC++ V++D TG+V++ Y+DMKYA++KLD S FR+ S
Sbjct: 111 PPTGSWQDLKDHMREAGDVCYADVYKD---GTGVVEFLRYEDMKYAVKKLDDSRFRSHES 167
Query: 178 R-SYVRVRE 185
SYVRV+E
Sbjct: 168 EVSYVRVKE 176
>gi|358336433|dbj|GAA54942.1| splicing factor arginine/serine-rich 1/9 [Clonorchis sinensis]
Length = 251
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 110/198 (55%), Positives = 136/198 (68%), Gaps = 28/198 (14%)
Query: 3 SRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAI 62
+RS+ +YVGNLP D + R+VE+LF KYGPI +IDLK PP +AF+EFED DA DA+
Sbjct: 2 ARSTTKIYVGNLPPDVKTRDVENLFSKYGPIAEIDLKSRRGPP-FAFIEFEDELDAADAV 60
Query: 63 RGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYS-SGGS-------------RGVSRRS 108
RGRDGYNFDGY LRVE GG +SY+ SGG+ G SRRS
Sbjct: 61 RGRDGYNFDGYALRVEFPRGGT---------ASYNGSGGNFNSFRRGGFGRGGGGPSRRS 111
Query: 109 DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLD 168
D+RV+VTGLP + SWQDLKDHMR AGDV ++ VFRD TG+V++ Y+DMKYA+RKLD
Sbjct: 112 DFRVVVTGLPPTGSWQDLKDHMREAGDVGYADVFRDG---TGVVEFLRYEDMKYAVRKLD 168
Query: 169 RSEFR-NAFSRSYVRVRE 185
S+FR + SY+RVRE
Sbjct: 169 DSKFRSHEGESSYIRVRE 186
>gi|156545752|ref|XP_001605411.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Nasonia
vitripennis]
Length = 257
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 102/191 (53%), Positives = 131/191 (68%), Gaps = 13/191 (6%)
Query: 4 RSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIR 63
R+ +YVGNLP D R ++++DLFYK+G + +DLK PP +AF+EF+D RDAEDA+
Sbjct: 17 RNECRIYVGNLPPDIRTKDIQDLFYKFGKVTFVDLKNRRGPP-FAFVEFDDPRDAEDAVH 75
Query: 64 GRDGYNFDGYRLRVELAHGGRRHSS-----SMDRYSSYSSGGSRG---VSRRSDYRVLVT 115
RDGY++DGYRLRVE GG SS D G SRG +RRS YRVLVT
Sbjct: 76 ARDGYDYDGYRLRVEFPRGGGPSSSFRGRGGGDSRGRGDMGNSRGRGPPARRSQYRVLVT 135
Query: 116 GLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-N 174
GLP S SWQDLKDHMR AGDVCF+ V++D TG+V++ Y+DMKYA++KLD S FR +
Sbjct: 136 GLPPSGSWQDLKDHMREAGDVCFADVYKD---GTGVVEFLRYEDMKYAVKKLDDSRFRSH 192
Query: 175 AFSRSYVRVRE 185
+Y+RV+E
Sbjct: 193 EGEVAYIRVKE 203
>gi|158293128|ref|XP_314469.4| AGAP010496-PA [Anopheles gambiae str. PEST]
gi|157016810|gb|EAA09889.4| AGAP010496-PA [Anopheles gambiae str. PEST]
Length = 258
Score = 184 bits (466), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 113/252 (44%), Positives = 155/252 (61%), Gaps = 17/252 (6%)
Query: 4 RSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIR 63
R+ +YVGNLP D R ++++DLF+K+G + +DLK PP +AF+EFED RDA+DA++
Sbjct: 5 RNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADDAVK 63
Query: 64 GRDGYNFDGYRLRVELAHGGRRHS------SSMDRYSSYSSGGSRG-VSRRSDYRVLVTG 116
RDGY++DGYRLRVE GG S + DR S +RG +RRS +RV+VTG
Sbjct: 64 ARDGYDYDGYRLRVEFPRGGGPGSYRGSRQGNSDRNSRGGDRNNRGPPARRSQFRVMVTG 123
Query: 117 LPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAF 176
LPSS SWQDLKDHMR AGDVCF+ V++D TG+V++ ++DMKYAI+KLD S FR+
Sbjct: 124 LPSSGSWQDLKDHMREAGDVCFADVYKD---GTGVVEFLRHEDMKYAIKKLDDSRFRS-- 178
Query: 177 SRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYSPRGK 236
V + R S + R+ + S + SPR++SYSPR +
Sbjct: 179 --HEVSKKTRGEREREREKERGRERESSTCERANFIPIPIFYILSQTMSPRAKSYSPRRR 236
Query: 237 YSRRSPSLSPAR 248
R SP+ SP +
Sbjct: 237 --RGSPTYSPVQ 246
>gi|82233969|sp|Q5ZML3.3|SRSF1_CHICK RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Splicing factor, arginine/serine-rich 1
gi|53127294|emb|CAG31030.1| hypothetical protein RCJMB04_1l5 [Gallus gallus]
Length = 257
Score = 183 bits (464), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 107/204 (52%), Positives = 134/204 (65%), Gaps = 15/204 (7%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
++DGYRLRVE GR + R SRRS+YRV+V+GLP S SWQDL
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSEYRVIVSGLPPSGSWQDL 137
Query: 127 KDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 185
KDHMR AGDVC++ VFRD TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 138 KDHMREAGDVCYADVFRD---GTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK- 193
Query: 186 YDSRRSYSRSPSRSPYYSRSRSRS 209
RSP Y RSRSRS
Sbjct: 194 --------VDGPRSPSYGRSRSRS 209
>gi|428183363|gb|EKX52221.1| hypothetical protein GUITHDRAFT_41825, partial [Guillardia theta
CCMP2712]
Length = 195
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 94/177 (53%), Positives = 122/177 (68%), Gaps = 11/177 (6%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R R++EDLFYKYG I DI++K P RPP +AF+ FEDYRDAEDAIRGRDG
Sbjct: 1 IYVGNLPLDIRTRDIEDLFYKYGRIRDIEVKTPNRPPAFAFVSFEDYRDAEDAIRGRDGI 60
Query: 69 NFDGYRLRVELAHG-GRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLK 127
+F+G RLR E++ G G R S R RRSDYRV+V+ LP SASWQDLK
Sbjct: 61 SFEGARLRCEMSRGNGPRGSRQQPRRD----------LRRSDYRVIVSNLPPSASWQDLK 110
Query: 128 DHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVR 184
DH R+ G+V ++ V R GIV++ S + + AI++LD +EF+N F + Y+RV+
Sbjct: 111 DHFRQVGEVVYTDVDRSLKSSGGIVEFASRSEQEAAIKQLDDTEFKNPFDKVYIRVK 167
>gi|332027470|gb|EGI67553.1| Splicing factor, arginine/serine-rich 1 [Acromyrmex echinatior]
Length = 248
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/210 (49%), Positives = 136/210 (64%), Gaps = 16/210 (7%)
Query: 2 SSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDA 61
R+ +YVGNLP D R ++++DLFYK+G + +DLK PP +AF+EF+D RDAEDA
Sbjct: 4 GGRNECRIYVGNLPPDIRTKDIQDLFYKFGKVTFVDLKNRRGPP-FAFVEFDDPRDAEDA 62
Query: 62 IRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSG-GSRGV----------SRRSDY 110
+ RDGY++DGYRLRVE GG ++ + SG G RG +RRS Y
Sbjct: 63 VHARDGYDYDGYRLRVEFPRGGGPSNNFRGGRGAGDSGRGGRGEMSNSRGRGPPARRSQY 122
Query: 111 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRS 170
RVLV+GLP S SWQDLKDHMR AGDVCF+ V++D TG+V++ +DDMKYA++KLD S
Sbjct: 123 RVLVSGLPPSGSWQDLKDHMREAGDVCFADVYKD---GTGVVEFLRHDDMKYAVKKLDDS 179
Query: 171 EFR-NAFSRSYVRVREYDSRRSYSRSPSRS 199
FR + +Y+RV+E S RS R
Sbjct: 180 RFRSHEGEVAYIRVKEDHSGGDRGRSEDRE 209
>gi|170045710|ref|XP_001850441.1| arginine/serine-rich splicing factor [Culex quinquefasciatus]
gi|167868651|gb|EDS32034.1| arginine/serine-rich splicing factor [Culex quinquefasciatus]
Length = 241
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 109/228 (47%), Positives = 143/228 (62%), Gaps = 21/228 (9%)
Query: 2 SSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDA 61
S R+ +YVGNLP D R ++++DLF+K+G + +DLK PP +AF+EFED RDA+DA
Sbjct: 3 SGRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDNRDADDA 61
Query: 62 IRGRDGYNFDGYRLRVELAHGG-----------RRHSSSMDRYSSYSSGGSRGV-SRRSD 109
++ RDGY++DGYRLRVE GG G +RG +RRS
Sbjct: 62 VKARDGYDYDGYRLRVEFPRGGGPGSYRGSRGSTSGDRGGGSSGRDRGGNNRGPPARRSQ 121
Query: 110 YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDR 169
+RV+VTGLP+S SWQDLKDHMR AGDVCF+ V++D TG+V+Y ++DMKYAI+KLD
Sbjct: 122 FRVVVTGLPASGSWQDLKDHMREAGDVCFADVYKD---GTGVVEYLRHEDMKYAIKKLDD 178
Query: 170 SEFR-NAFSRSYVRVRE---YDSRRSYSRSPSRSPYYSRSRSRSPYYS 213
S FR + +Y+RVRE D RR RS Y R R +P YS
Sbjct: 179 SRFRSHEGEVAYIRVREDSGNDDRRGGGEHRDRS-YSPRRRRGTPTYS 225
>gi|402587972|gb|EJW81906.1| splicing factor [Wuchereria bancrofti]
Length = 228
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 124/234 (52%), Positives = 155/234 (66%), Gaps = 17/234 (7%)
Query: 3 SRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAI 62
SR SR +YVGNLP R ++VED+F KYG ++ +DLK R P +AF+EFED RDAEDA+
Sbjct: 2 SRESR-IYVGNLPTTVRAKDVEDIFSKYGRVLYVDLK-DRRQPYFAFVEFEDARDAEDAV 59
Query: 63 RGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSS---------YSSGGSRGVSRRSDYRVL 113
RGRDGY+++GYRLRVE G Y S GGS SRR+ YRV+
Sbjct: 60 RGRDGYDYEGYRLRVEFPRGLGPRGPGGRPYDSGRNLSVSRSACGGGSSSGSRRASYRVI 119
Query: 114 VTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
V+GLP+S SWQDLKDHMR AGDVC++ V RD TGIV+Y Y+DMKYA+RKLD ++F+
Sbjct: 120 VSGLPASGSWQDLKDHMREAGDVCYTDVLRD---GTGIVEYGRYEDMKYALRKLDDTKFK 176
Query: 174 -NAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSP 226
+ SY+RV+E D+ S + S SRSP SR SP YS S S S S S+SP
Sbjct: 177 SHEGETSYIRVKE-DNGESRAHSRSRSPVGRASRG-SPQYSPSYSNSGSHSHSP 228
>gi|260833614|ref|XP_002611807.1| hypothetical protein BRAFLDRAFT_243385 [Branchiostoma floridae]
gi|229297179|gb|EEN67816.1| hypothetical protein BRAFLDRAFT_243385 [Branchiostoma floridae]
Length = 177
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 96/165 (58%), Positives = 121/165 (73%), Gaps = 11/165 (6%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R++++ED+FYKYG I IDLK PP +AF+EF+D RDAEDA+RGRDGY
Sbjct: 10 IYVGNLPPDIRVKDIEDIFYKYGNIRHIDLKNKRGPP-FAFVEFDDKRDAEDAVRGRDGY 68
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
N+DGYRLRVE G R R S RRS+YRVLV+GLP + SWQDLKD
Sbjct: 69 NYDGYRLRVEFPRGTSRGGYRGGRRVGQPS-------RRSEYRVLVSGLPPTGSWQDLKD 121
Query: 129 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
HMR AGDVC++ VFRD TG+V++ +Y+DMKYA+++LD S+FR
Sbjct: 122 HMREAGDVCYADVFRDG---TGVVEFLNYEDMKYAVKQLDDSKFR 163
>gi|291228498|ref|XP_002734207.1| PREDICTED: splicing factor, arginine/serine-rich 1-like isoform 1
[Saccoglossus kowalevskii]
Length = 230
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 99/179 (55%), Positives = 128/179 (71%), Gaps = 6/179 (3%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R++++ED+FYKYG I+DIDLK PP ++F+EFED RDAEDA+RGRDGY
Sbjct: 16 IYVGNLPPDIRVKDIEDIFYKYGNILDIDLKNRRGPP-FSFVEFEDKRDAEDAVRGRDGY 74
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV-SRRSDYRVLVTGLPSSASWQDLK 127
++DGYRLRVE GG G G +RRS+YR LV+GLP + SWQDLK
Sbjct: 75 DYDGYRLRVEFPRGGGGGGGGGGGLGGGPGRGRGGPPARRSEYRCLVSGLPPTGSWQDLK 134
Query: 128 DHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 185
DHMR AGDVCF+ V+RD TG+V++ Y+DMKYA + LD ++FR + SY+RV+E
Sbjct: 135 DHMREAGDVCFADVYRDG---TGVVEFLRYEDMKYAAKHLDDTKFRSHEGETSYIRVKE 190
>gi|384252888|gb|EIE26363.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 343
Score = 181 bits (458), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 98/210 (46%), Positives = 130/210 (61%), Gaps = 23/210 (10%)
Query: 8 TLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDG 67
++VGNLPGD R RE+EDLFYKYG I +IDLK+PPRPP +AF+EFE AEDA++GRDG
Sbjct: 7 VIFVGNLPGDVREREIEDLFYKYGRIRNIDLKLPPRPPAFAFVEFEKPSHAEDAVKGRDG 66
Query: 68 YNFDGYRLRVELAHGGRRHSSSMDRYS-----------------SYSSGGSRGV-----S 105
Y FD +RVEL+ GG S D+ S ++ V
Sbjct: 67 YVFDNNPIRVELSRGGMGGRSGGDKTSGAPPRDRDEPRGGGGGATFGRAAPPPVPSNFRQ 126
Query: 106 RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIR 165
+ S YR V LP SASWQDLKDH R+ + VFRDRGG+ G+V++ + +D+ AIR
Sbjct: 127 KGSAYRATVKNLPMSASWQDLKDHFRKVCTPNYVNVFRDRGGVLGVVEFDTPEDLARAIR 186
Query: 166 KLDRSEFRNAFSRSYVR-VREYDSRRSYSR 194
KLD +EFRN F R+Y+R V + D +R++ +
Sbjct: 187 KLDDTEFRNPFERAYIRVVDDSDDKRNHGK 216
>gi|194744791|ref|XP_001954876.1| GF16525 [Drosophila ananassae]
gi|190627913|gb|EDV43437.1| GF16525 [Drosophila ananassae]
Length = 253
Score = 180 bits (457), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 98/190 (51%), Positives = 132/190 (69%), Gaps = 9/190 (4%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M SR+ +YVGNLP D R ++++DLF+K+G + +DLK PP +AF+EFED RDA+D
Sbjct: 1 MGSRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADD 59
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV----SRRSDYRVLVTG 116
A++ RDGY++DGYRLRVE GG S +R GG G ++RS YRV+VTG
Sbjct: 60 AVKARDGYDYDGYRLRVEFPRGGGPGSYRGNRNDRSRDGGRMGGRGPPAKRSQYRVMVTG 119
Query: 117 LPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NA 175
LP S SWQDLKDHMR AGDVCF+ ++D +G+V++ ++DMKYAI+KLD S FR +
Sbjct: 120 LPGSGSWQDLKDHMREAGDVCFADTYKD---GSGVVEFLRHEDMKYAIKKLDDSRFRSHE 176
Query: 176 FSRSYVRVRE 185
+Y+RVRE
Sbjct: 177 GEVAYIRVRE 186
>gi|348518702|ref|XP_003446870.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Oreochromis
niloticus]
Length = 243
Score = 180 bits (456), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 99/181 (54%), Positives = 125/181 (69%), Gaps = 11/181 (6%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R ++VED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDVEDVFYKYGIIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRG----VSRRSDYRVLVTGLPSSASWQ 124
++DGYRLRVE R + G RG SRRS+YRV+V+GLP S SWQ
Sbjct: 78 DYDGYRLRVEFP---RSGRGGGRGGGGGALGTPRGRYGPPSRRSEYRVIVSGLPPSGSWQ 134
Query: 125 DLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 183
DLKDHMR AGDVC++ V+RD TG+V++ +DM YAIRKLD ++FR + +Y+RV
Sbjct: 135 DLKDHMREAGDVCYADVYRD---GTGVVEFVRKEDMTYAIRKLDNTKFRSHEGETAYIRV 191
Query: 184 R 184
+
Sbjct: 192 K 192
>gi|195152782|ref|XP_002017315.1| GL22249 [Drosophila persimilis]
gi|198454070|ref|XP_001359460.2| GA20008 [Drosophila pseudoobscura pseudoobscura]
gi|194112372|gb|EDW34415.1| GL22249 [Drosophila persimilis]
gi|198132637|gb|EAL28606.2| GA20008 [Drosophila pseudoobscura pseudoobscura]
Length = 263
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 95/192 (49%), Positives = 131/192 (68%), Gaps = 11/192 (5%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M SR+ +YVGNLP D R ++++DLF+K+G + +DLK PP +AF+EFED RDA+D
Sbjct: 1 MGSRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADD 59
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV------SRRSDYRVLV 114
A++ RDGY++DGYRLRVE GG S +R + + ++RS YRV+V
Sbjct: 60 AVKARDGYDYDGYRLRVEFPRGGGPGSYRGNRNDRNNGRDGGRMGGRGPPAKRSQYRVMV 119
Query: 115 TGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR- 173
TGLP S SWQDLKDHMR AGDVCF+ ++D +G+V++ ++DMKYAI+KLD S FR
Sbjct: 120 TGLPPSGSWQDLKDHMREAGDVCFADTYKD---GSGVVEFLRHEDMKYAIKKLDDSRFRS 176
Query: 174 NAFSRSYVRVRE 185
+ +Y+RVRE
Sbjct: 177 HEGEVAYIRVRE 188
>gi|195038647|ref|XP_001990768.1| GH18077 [Drosophila grimshawi]
gi|193894964|gb|EDV93830.1| GH18077 [Drosophila grimshawi]
Length = 252
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 96/192 (50%), Positives = 131/192 (68%), Gaps = 11/192 (5%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M SR+ +YVGNLP D R ++++DLF+K+G + +DLK PP +AF+EFED RDA+D
Sbjct: 1 MGSRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADD 59
Query: 61 AIRGRDGYNFDGYRLRVELAHGGR----RHSSSMDRYSSYSSGGSRGV--SRRSDYRVLV 114
A++ RDGY++DGYRLRVE GG R ++ DR ++RS YRV+V
Sbjct: 60 AVKARDGYDYDGYRLRVEFPRGGGPGSYRGNNRNDRSRDGGGRMGGRGPPAKRSQYRVMV 119
Query: 115 TGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR- 173
TGLP S SWQDLKDHMR AGDVCF+ ++D +G+V++ ++DMKYAI+KLD S FR
Sbjct: 120 TGLPGSGSWQDLKDHMREAGDVCFADTYKD---GSGVVEFLRHEDMKYAIKKLDDSRFRS 176
Query: 174 NAFSRSYVRVRE 185
+ +Y+RVRE
Sbjct: 177 HEGEVAYIRVRE 188
>gi|195388956|ref|XP_002053144.1| GJ23504 [Drosophila virilis]
gi|194151230|gb|EDW66664.1| GJ23504 [Drosophila virilis]
Length = 247
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 96/192 (50%), Positives = 131/192 (68%), Gaps = 11/192 (5%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M SR+ +YVGNLP D R ++++DLF+K+G + +DLK PP +AF+EFED RDA+D
Sbjct: 1 MGSRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADD 59
Query: 61 AIRGRDGYNFDGYRLRVELAHGGR----RHSSSMDRYSSYSSGGSRGV--SRRSDYRVLV 114
A++ RDGY++DGYRLRVE GG R ++ DR ++RS YRV+V
Sbjct: 60 AVKARDGYDYDGYRLRVEFPRGGGPGSYRGNNRNDRSRDGGGRMGGRGPPAKRSQYRVMV 119
Query: 115 TGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR- 173
TGLP S SWQDLKDHMR AGDVCF+ ++D +G+V++ ++DMKYAI+KLD S FR
Sbjct: 120 TGLPGSGSWQDLKDHMREAGDVCFADTYKD---GSGVVEFLRHEDMKYAIKKLDDSRFRS 176
Query: 174 NAFSRSYVRVRE 185
+ +Y+RVRE
Sbjct: 177 HEGEVAYIRVRE 188
>gi|324504398|gb|ADY41900.1| Serine/arginine-rich splicing factor 1 [Ascaris suum]
Length = 233
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 117/233 (50%), Positives = 147/233 (63%), Gaps = 22/233 (9%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP R +++ED+F K+G ++ +DLK RPP +AF+EFED RDAEDA+R RDGY
Sbjct: 7 IYVGNLPTSVRTKDIEDIFTKFGKVLFVDLK-DKRPPYFAFVEFEDPRDAEDAVRSRDGY 65
Query: 69 NFDGYRLRVELA-------------HGGRR--HSSSMDRYSSYSSGGSRGVSRRSDYRVL 113
+F GYRLRVE HG R S D GSR RR++YRV+
Sbjct: 66 DFYGYRLRVEFPRGVGPRGPGGRPLHGNDRGYSGSRGDGGYGGGGSGSRSGGRRTNYRVI 125
Query: 114 VTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
VTGLP+S SWQDLKDHMR AGDVC++ + RD TG+V+Y DDMKYAIRKLD ++F+
Sbjct: 126 VTGLPTSGSWQDLKDHMREAGDVCYADITRD---GTGVVEYARLDDMKYAIRKLDDTKFK 182
Query: 174 -NAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYS 225
+ +Y+RVRE D RS SRSP +R+ SP YS SRS S S
Sbjct: 183 SHEGETAYIRVRE-DDINGGGRSRSRSP-MARATRGSPQYSPKGGRSRSRSTS 233
>gi|241849002|ref|XP_002415663.1| alternative splicing factor ASF/SF2, putative [Ixodes scapularis]
gi|215509877|gb|EEC19330.1| alternative splicing factor ASF/SF2, putative [Ixodes scapularis]
Length = 223
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/187 (55%), Positives = 128/187 (68%), Gaps = 11/187 (5%)
Query: 1 MSSRSSRT-LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAE 59
MS R + +YVGNLP D R +++EDLFYK+G I IDLK PP +AF+EFED RDAE
Sbjct: 1 MSFRGNECRIYVGNLPPDIRTKDIEDLFYKFGKITFIDLKNRRGPP-FAFVEFEDPRDAE 59
Query: 60 DAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPS 119
DA RDGY++DGYRLRVE G S+ R G +RRS YRVLV+GLP
Sbjct: 60 DAAHARDGYDYDGYRLRVEFPRG-----SAPGRGGMGPGRGRGPPARRSQYRVLVSGLPP 114
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSR 178
S SWQDLKDHMR AGDVC++ VF+D TG+V++ Y+DMKYA++KLD S FR +
Sbjct: 115 SGSWQDLKDHMREAGDVCYADVFKD---GTGVVEFLRYEDMKYAVKKLDDSRFRSHEGEV 171
Query: 179 SYVRVRE 185
SY+RVRE
Sbjct: 172 SYIRVRE 178
>gi|195110201|ref|XP_001999670.1| GI24651 [Drosophila mojavensis]
gi|193916264|gb|EDW15131.1| GI24651 [Drosophila mojavensis]
Length = 246
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 96/192 (50%), Positives = 131/192 (68%), Gaps = 11/192 (5%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M SR+ +YVGNLP D R ++++DLF+K+G + +DLK PP +AF+EFED RDA+D
Sbjct: 1 MGSRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADD 59
Query: 61 AIRGRDGYNFDGYRLRVELAHGGR----RHSSSMDRYSSYSSGGSRGV--SRRSDYRVLV 114
A++ RDGY++DGYRLRVE GG R ++ DR ++RS YRV+V
Sbjct: 60 AVKARDGYDYDGYRLRVEFPRGGGPGSYRGNNRNDRSRDGGGRMGGRGPPAKRSQYRVMV 119
Query: 115 TGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR- 173
TGLP S SWQDLKDHMR AGDVCF+ ++D +G+V++ ++DMKYAI+KLD S FR
Sbjct: 120 TGLPGSGSWQDLKDHMREAGDVCFADTYKD---GSGVVEFLRHEDMKYAIKKLDDSRFRS 176
Query: 174 NAFSRSYVRVRE 185
+ +Y+RVRE
Sbjct: 177 HEGEVAYIRVRE 188
>gi|195996923|ref|XP_002108330.1| hypothetical protein TRIADDRAFT_49822 [Trichoplax adhaerens]
gi|190589106|gb|EDV29128.1| hypothetical protein TRIADDRAFT_49822 [Trichoplax adhaerens]
Length = 223
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/198 (54%), Positives = 134/198 (67%), Gaps = 6/198 (3%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS + +Y+GNLP D R R++EDLFYKYG I+ I LK R P +AF+EFED RDAED
Sbjct: 1 MSRYNECRIYIGNLPSDIRERDLEDLFYKYGKILSISLKDNRRGPPFAFVEFEDKRDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV-SRRSDYRVLVTGLPS 119
AI GRDGY+FDG RLRVE GG R + G +RRSD+RV+V+GLP
Sbjct: 61 AIDGRDGYDFDGCRLRVEAPRGGGGGGGDYGRRGRGNGSGGGRGPARRSDHRVIVSGLPQ 120
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSR 178
+ SWQDLKDHMR AG+V F+ V+RD TG+V++ Y D+KYA++ LD S+FR +
Sbjct: 121 TGSWQDLKDHMREAGEVYFADVYRD---GTGVVEFAHYSDVKYALKHLDDSKFRSHEGET 177
Query: 179 SYVRVREYDSRRSYSRSP 196
SYVRV+E D RS SRSP
Sbjct: 178 SYVRVKE-DRGRSRSRSP 194
>gi|432113649|gb|ELK35931.1| Vascular endothelial zinc finger 1 [Myotis davidii]
Length = 688
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/167 (55%), Positives = 116/167 (69%), Gaps = 5/167 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
++DGYRLRVE GR + R SRRS+ RV+V+GLP S SWQDL
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137
Query: 127 KDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
KDHMR AGDVC++ V+RD TG+V++ +DM YA+RKLD ++FR
Sbjct: 138 KDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFR 181
>gi|260833612|ref|XP_002611806.1| hypothetical protein BRAFLDRAFT_141671 [Branchiostoma floridae]
gi|229297178|gb|EEN67815.1| hypothetical protein BRAFLDRAFT_141671 [Branchiostoma floridae]
Length = 175
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 97/175 (55%), Positives = 121/175 (69%), Gaps = 7/175 (4%)
Query: 2 SSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDA 61
S + +YVGNLP + R +++D+FYKYG I+ +DLKI PP +AF+EFED RDA+DA
Sbjct: 1 SGNNDCRIYVGNLPPEVRQEDIKDVFYKYGKIIHVDLKIGRGPP-FAFVEFEDKRDADDA 59
Query: 62 IRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV---SRRSDYRVLVTGLP 118
+ GRDGY DGYRLRVE G R GG+R SRRS+YRVLV+GLP
Sbjct: 60 VYGRDGYTLDGYRLRVEFPRGSARGGYGRSGGGGGGGGGARRGGAPSRRSEYRVLVSGLP 119
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
+ SWQDLKDHMR AGDVCF+ VFRD TG+V++ YDDMKYA++ LD S+FR
Sbjct: 120 PTGSWQDLKDHMREAGDVCFADVFRDG---TGVVEFLRYDDMKYAVKHLDDSKFR 171
>gi|307203784|gb|EFN82720.1| Splicing factor, arginine/serine-rich 1 [Harpegnathos saltator]
Length = 193
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 96/183 (52%), Positives = 124/183 (67%), Gaps = 15/183 (8%)
Query: 2 SSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDA 61
R+ +YVGNLP D R ++++DLFYK+G + +DLK PP +AF+EF+D RDAEDA
Sbjct: 4 GGRNECRIYVGNLPPDIRTKDIQDLFYKFGKVTFVDLKNRRGPP-FAFVEFDDPRDAEDA 62
Query: 62 IRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSG-GSRGV----------SRRSDY 110
+ RDGY++DGYRLRVE GG ++ + SG G RG +RRS Y
Sbjct: 63 VHARDGYDYDGYRLRVEFPRGGGPSNNFRGGRGAGDSGRGGRGEMSNSRGRGPPARRSQY 122
Query: 111 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRS 170
RVLVTGLP S SWQDLKDHMR AGDVCF+ V++D TG+V++ +DDMKYA++KLD S
Sbjct: 123 RVLVTGLPPSGSWQDLKDHMREAGDVCFADVYKD---GTGVVEFLRHDDMKYAVKKLDDS 179
Query: 171 EFR 173
FR
Sbjct: 180 RFR 182
>gi|312074319|ref|XP_003139917.1| arginine/serine-rich splicing factor 1B [Loa loa]
gi|307764919|gb|EFO24153.1| arginine/serine-rich splicing factor 1B [Loa loa]
Length = 266
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 121/285 (42%), Positives = 164/285 (57%), Gaps = 34/285 (11%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M+ R ++VGNLP D + R++ED+FYKYG I ID+K P +AF+EF+D RDA D
Sbjct: 1 MAGRRDCRVFVGNLPSDVKQRDLEDIFYKYGRINFIDIKFTRDVP-FAFVEFDDPRDARD 59
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRG--VSRRSDYRVLVTGLP 118
A+ GRDGY+FDG R+RVEL G R RRS YRV+++GLP
Sbjct: 60 AVHGRDGYDFDGCRIRVELTRGVGPRGPGGRPLYGPDPRSPRHGPPPRRSGYRVVISGLP 119
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFS 177
+ SWQDLKDHMR AG++C++ VFRD TG+V+YT+Y+DMKYA+RKLD ++F+ +
Sbjct: 120 DTGSWQDLKDHMRDAGEICYADVFRD---GTGVVEYTNYEDMKYALRKLDDTKFKSHEGE 176
Query: 178 RSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSP----------- 226
+Y+RVRE + SP SRSRS +P +RS S YSP
Sbjct: 177 VTYIRVREAN---------INSPNRSRSRSYTPRKTRS-----SPKYSPIRSVSRSRSRS 222
Query: 227 RSRSYSPRGKYSRRSPSLSPARSASQRSPSGSPPRSFSRSGSFAR 271
+ RR S+SP S+ RSPS + ++ RS S +R
Sbjct: 223 SRSRSHSHASFVRR--SVSPVNSSHSRSPSRTRSKTCPRSRSESR 265
>gi|56758822|gb|AAW27551.1| SJCHGC05822 protein [Schistosoma japonicum]
gi|226469552|emb|CAX76606.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469554|emb|CAX76607.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469556|emb|CAX76608.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469558|emb|CAX76609.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469560|emb|CAX76610.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469562|emb|CAX76611.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469564|emb|CAX76612.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226472960|emb|CAX71166.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226472964|emb|CAX71168.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226472966|emb|CAX71169.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
Length = 225
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 107/194 (55%), Positives = 133/194 (68%), Gaps = 14/194 (7%)
Query: 3 SRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPR-PPGYAFLEFEDYRDAEDA 61
SR++ +YVGNLP D + R++E+LF KYGPI IDLK R P +AF+EFED DA DA
Sbjct: 2 SRTTHKIYVGNLPPDAKTRDIENLFSKYGPIAAIDLKAGQRRGPPFAFVEFEDELDASDA 61
Query: 62 IRGRDGYNFDGYRLRVELAHGG---------RRHSSSMDRYSSYSSGGSRGVSRRSDYRV 112
+RGRDGYNFDGY LRVEL G + ++ GGS G SRRSD+RV
Sbjct: 62 VRGRDGYNFDGYALRVELPRTGSYNNGNGGPNNNQFRRGGFNRGGGGGSSGPSRRSDFRV 121
Query: 113 LVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
+VTGLP + SWQDLKDHMR AGDV ++ VFRD TG+V++ Y+DMKYAIR+LD S+F
Sbjct: 122 IVTGLPPTGSWQDLKDHMREAGDVGYADVFRD---GTGVVEFLRYEDMKYAIRRLDDSKF 178
Query: 173 R-NAFSRSYVRVRE 185
R + SY+RVRE
Sbjct: 179 RSHEGESSYIRVRE 192
>gi|410910210|ref|XP_003968583.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Takifugu
rubripes]
gi|47227796|emb|CAG08959.1| unnamed protein product [Tetraodon nigroviridis]
Length = 245
Score = 177 bits (448), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 96/177 (54%), Positives = 123/177 (69%), Gaps = 4/177 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R ++VED+FYKYG I DIDLK P +AF+EFED RDA+DA+ GRDGY
Sbjct: 16 IYVGNLPPDIRTKDVEDVFYKYGTIRDIDLKNRRGGPPFAFIEFEDPRDADDAVYGRDGY 75
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
++DGYRLRVE GR G SRRS+YRVLV+GLP S SWQDLKD
Sbjct: 76 DYDGYRLRVEFPRSGRGSRGGFGGIGGAPRGRYGPPSRRSEYRVLVSGLPQSGSWQDLKD 135
Query: 129 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 184
HMR AGDVC++ V+RD TG+V++ +DM YA+RKLD ++FR + +Y++V+
Sbjct: 136 HMREAGDVCYADVYRD---GTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIQVK 189
>gi|172046470|emb|CAQ34907.1| ASF/SF2 protein [Chironomus tentans]
Length = 246
Score = 177 bits (448), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 99/194 (51%), Positives = 133/194 (68%), Gaps = 13/194 (6%)
Query: 1 MSSRSSRT--LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDA 58
MSSR +YVGNLP D R ++VEDLF+++G + +DLK PP + F+EFED+RDA
Sbjct: 1 MSSRGGNENRIYVGNLPPDIRTKDVEDLFFRFGKVSFVDLKNRRGPP-FVFVEFEDHRDA 59
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGG------RRHSSSMDRYSSYSSGGSRGVSRRSDYRV 112
DA++ R Y++DGY+LRVE GG R S++ S G +R +RRS YRV
Sbjct: 60 SDAVKARSNYDYDGYKLRVEFPRGGGPGSSYRGRSNNDRGGSGRGGGNNRPAARRSQYRV 119
Query: 113 LVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
LV+GLPSS SWQDLKDHMR AGDVCF+ V++D TG+V++ Y+DMKYAI+KLD S F
Sbjct: 120 LVSGLPSSGSWQDLKDHMREAGDVCFADVYKD---GTGVVEFLRYEDMKYAIKKLDDSRF 176
Query: 173 R-NAFSRSYVRVRE 185
R + +Y+R++E
Sbjct: 177 RSHEGEVAYIRIKE 190
>gi|432889874|ref|XP_004075374.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Oryzias
latipes]
Length = 245
Score = 177 bits (448), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 96/177 (54%), Positives = 123/177 (69%), Gaps = 4/177 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R ++VED+FYKYG I DIDLK P +AF+EFED RDA+DA+ GRDGY
Sbjct: 16 IYVGNLPPDIRTKDVEDVFYKYGTIRDIDLKNRRGGPPFAFIEFEDPRDADDAVYGRDGY 75
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
++DGYRLRVE GR G SRRS+YRV+V+GLP S SWQDLKD
Sbjct: 76 DYDGYRLRVEFPRSGRGSRGGFGGIGGAPRGRYGPPSRRSEYRVVVSGLPQSGSWQDLKD 135
Query: 129 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 184
HMR AGDVC++ V+RD TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 136 HMREAGDVCYADVYRD---GTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 189
>gi|322789865|gb|EFZ15012.1| hypothetical protein SINV_14247 [Solenopsis invicta]
Length = 186
Score = 177 bits (448), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 95/183 (51%), Positives = 124/183 (67%), Gaps = 15/183 (8%)
Query: 2 SSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDA 61
R+ +YVGNLP D R ++++DLFYK+G + +DLK PP +AF+EF+D RDAEDA
Sbjct: 5 GGRNECRIYVGNLPPDIRTKDIQDLFYKFGKVTFVDLKNRRGPP-FAFVEFDDPRDAEDA 63
Query: 62 IRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSG-GSRGV----------SRRSDY 110
+ RDGY++DGYRLRVE GG ++ + SG G RG +RRS Y
Sbjct: 64 VHARDGYDYDGYRLRVEFPRGGGPSNNFRGGRGAGDSGRGGRGEMSNSRGRGPPARRSQY 123
Query: 111 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRS 170
RVLV+GLP S SWQDLKDHMR AGDVCF+ V++D TG+V++ +DDMKYA++KLD S
Sbjct: 124 RVLVSGLPPSGSWQDLKDHMREAGDVCFADVYKD---GTGVVEFLRHDDMKYAVKKLDDS 180
Query: 171 EFR 173
FR
Sbjct: 181 RFR 183
>gi|156394189|ref|XP_001636709.1| predicted protein [Nematostella vectensis]
gi|156223814|gb|EDO44646.1| predicted protein [Nematostella vectensis]
Length = 223
Score = 176 bits (447), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 96/182 (52%), Positives = 122/182 (67%), Gaps = 30/182 (16%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKI-----PPRPPGYAFLEFEDYRDAEDAIR 63
+YVGNLP D R +++ D+FYKYG I D+DLK PP +AF+EFED RDAEDA++
Sbjct: 11 VYVGNLPQDVREKDLHDIFYKYGHIADVDLKNRRGAGPP----FAFVEFEDPRDAEDAVK 66
Query: 64 GRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASW 123
GRDG+ FDGYR+RVE + GGS RRSD+RV V+GLP + SW
Sbjct: 67 GRDGHEFDGYRIRVE-----------------FPRGGSGPPPRRSDFRVQVSGLPPTGSW 109
Query: 124 QDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVR 182
QDLKDHMR AGDV F+ VF+D TG+V++ YDDMK+AIR LD S+FR + SY+R
Sbjct: 110 QDLKDHMREAGDVLFTDVFKD---GTGVVEFARYDDMKFAIRNLDDSKFRSHEGETSYIR 166
Query: 183 VR 184
V+
Sbjct: 167 VK 168
>gi|166091440|ref|NP_001107213.1| serine/arginine-rich splicing factor 1 [Gallus gallus]
Length = 248
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/179 (54%), Positives = 124/179 (69%), Gaps = 6/179 (3%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
++DGYRLRVE GR + R SRRS+YRV+V+GLP S SWQDL
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSEYRVIVSGLPPSGSWQDL 137
Query: 127 KDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 184
KDHMR AGDVC++ VFRD TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 138 KDHMREAGDVCYADVFRD---GTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 193
>gi|291190420|ref|NP_001167114.1| Splicing factor, arginine/serine-rich 1 [Salmo salar]
gi|223648208|gb|ACN10862.1| Splicing factor, arginine/serine-rich 1 [Salmo salar]
Length = 251
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/180 (53%), Positives = 122/180 (67%), Gaps = 7/180 (3%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R ++VED+FYKYG I DIDLK P +AF+EFED RDA+DA+ GRDGY
Sbjct: 17 IYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFIEFEDPRDADDAVYGRDGY 76
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV---SRRSDYRVLVTGLPSSASWQD 125
++DGYRLRVE GR SRRS+YRV+V+GLP S SWQD
Sbjct: 77 DYDGYRLRVEFPRSGRGGGRGGFGGGGVGGAPRGRYGPPSRRSEYRVIVSGLPQSGSWQD 136
Query: 126 LKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 184
LKDHMR AGDVC++ VFRD TG+V++ +DM YA+RKLD ++FR + +YVRV+
Sbjct: 137 LKDHMREAGDVCYADVFRD---GTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYVRVK 193
>gi|240848767|ref|NP_001155687.1| serine/arginine-rich splicing factor 1-like [Acyrthosiphon pisum]
gi|239789607|dbj|BAH71418.1| ACYPI006929 [Acyrthosiphon pisum]
Length = 244
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/199 (50%), Positives = 135/199 (67%), Gaps = 19/199 (9%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS+ R +YVGNLP D R ++++DLFYK+G ++ +DLK PP +AF+EF+D RDAED
Sbjct: 1 MSNNDCR-IYVGNLPPDIRTKDIQDLFYKFGKVLFVDLKNQRGPP-FAFVEFDDPRDAED 58
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRH--------SSSMDRYSSYSSGGSRGV-----SRR 107
A+ RDGY++DGYRLRVE G H SS Y+ + G G +RR
Sbjct: 59 AVHARDGYDYDGYRLRVEFPRGNGPHRSGGGGGSSSGGGSYNRGGASGGSGRSRGPPARR 118
Query: 108 SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKL 167
S YRVLVTGLP+S SWQDLKDHMR AGDVC++ V++D +G+V++ YDDMKYA+RKL
Sbjct: 119 SQYRVLVTGLPASGSWQDLKDHMREAGDVCYADVYKDG---SGVVEFLRYDDMKYAVRKL 175
Query: 168 DRSEFR-NAFSRSYVRVRE 185
D S FR + +Y+RV++
Sbjct: 176 DDSRFRSHEGEVTYIRVKD 194
>gi|198432543|ref|XP_002131859.1| PREDICTED: similar to splicing factor, arginine/serine-rich 1
[Ciona intestinalis]
Length = 235
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/187 (51%), Positives = 131/187 (70%), Gaps = 8/187 (4%)
Query: 1 MSSRSSRT--LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDA 58
MSSR +YVGNLP D R ++VEDLFYKYG I ++LK PP +AF+EFED RDA
Sbjct: 1 MSSRDDVDCRVYVGNLPPDVREKDVEDLFYKYGSIRHVNLKNRRGPP-FAFVEFEDRRDA 59
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLP 118
ED++ GR+GYNFDGY+LRVE G SS+ + G SRR+D+RV+V+GLP
Sbjct: 60 EDSVHGRNGYNFDGYKLRVEHPRGNGPSQRPAYGMSSFRARGGP-PSRRTDFRVMVSGLP 118
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFS 177
+ SWQDLKDHMR AGDVC++ V+RD TG+V++ + DDM++A++ LD ++FR +
Sbjct: 119 PTGSWQDLKDHMREAGDVCYADVYRD---GTGVVEFVNRDDMQFAVKHLDDTKFRSHEGE 175
Query: 178 RSYVRVR 184
+Y+RV+
Sbjct: 176 TAYIRVK 182
>gi|91085405|ref|XP_967263.1| PREDICTED: similar to GA20008-PA [Tribolium castaneum]
gi|270009156|gb|EFA05604.1| hypothetical protein TcasGA2_TC015810 [Tribolium castaneum]
Length = 226
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/186 (54%), Positives = 130/186 (69%), Gaps = 6/186 (3%)
Query: 2 SSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDA 61
+SR+ +YVGNLP D R ++++DLFYK+G + +DLK PP +AF+EFED RDA+DA
Sbjct: 3 NSRNDCRIYVGNLPPDIRTKDIQDLFYKFGKVTFVDLKNRRGPP-FAFVEFEDPRDADDA 61
Query: 62 IRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV-SRRSDYRVLVTGLPSS 120
+ RDGY++DGYRLRVE GG S R SRG +RRS +RVLVTGLP S
Sbjct: 62 VHARDGYDYDGYRLRVEFPRGGGHGSFRGGRGGGDRGRSSRGPPARRSQFRVLVTGLPPS 121
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRS 179
SWQDLKDHMR AGDVCF+ F+D +G+V++ Y+DMKYAI+KLD S FR + S
Sbjct: 122 GSWQDLKDHMREAGDVCFADAFKDG---SGVVEFLRYEDMKYAIKKLDDSRFRSHEGEVS 178
Query: 180 YVRVRE 185
Y+RV+E
Sbjct: 179 YIRVKE 184
>gi|45433540|ref|NP_956887.2| serine/arginine-rich splicing factor 1B [Danio rerio]
gi|71162369|sp|Q6NYA0.1|SRS1B_DANRE RecName: Full=Serine/arginine-rich splicing factor 1B; AltName:
Full=Splicing factor, arginine/serine-rich 1; AltName:
Full=Splicing factor, arginine/serine-rich 1B
gi|44890669|gb|AAH66682.1| Splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor) [Danio rerio]
Length = 245
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 98/179 (54%), Positives = 124/179 (69%), Gaps = 6/179 (3%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R ++VED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 17 IYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 76
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR--GVSRRSDYRVLVTGLPSSASWQDL 126
++DGYRLRVE GR + R SRRS+YRV+V+GLP S SWQDL
Sbjct: 77 DYDGYRLRVEFPRSGRGGGRGGGGGGGVGAPRGRYGPPSRRSEYRVIVSGLPPSGSWQDL 136
Query: 127 KDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 184
KDHMR AGDVC++ VFRD TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 137 KDHMREAGDVCYADVFRD---GTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 192
>gi|170591727|ref|XP_001900621.1| SF2 [Brugia malayi]
gi|158591773|gb|EDP30376.1| SF2, putative [Brugia malayi]
Length = 298
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 103/218 (47%), Positives = 139/218 (63%), Gaps = 16/218 (7%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M+ R ++VGNLP D + R++ED+FYKYG I ID+K P +AF+EF+D RDA D
Sbjct: 1 MAGRRDCRVFVGNLPSDVKQRDLEDIFYKYGRINFIDIKFTRDVP-FAFIEFDDPRDARD 59
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRY--SSYSSGGSRGVSRRSDYRVLVTGLP 118
A+ GRDGY+FDG R+RVEL G S RRS YRV+V+GLP
Sbjct: 60 AVHGRDGYDFDGCRIRVELTRGVGPRGPGGRPLYGPDSRSPRRGPPPRRSGYRVIVSGLP 119
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFS 177
+ SWQDLKDHMR AG++C++ VFRD TG+V+YT+Y+DMKYA+RKLD ++F+ +
Sbjct: 120 DTGSWQDLKDHMRDAGEICYADVFRDG---TGVVEYTNYEDMKYALRKLDDTKFKSHEGE 176
Query: 178 RSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRS 215
+Y+RV+E + SP SRSRS +P +RS
Sbjct: 177 VTYIRVKE---------ANINSPNRSRSRSHTPRKTRS 205
>gi|21358097|ref|NP_652611.1| SF2, isoform A [Drosophila melanogaster]
gi|386765902|ref|NP_001247139.1| SF2, isoform B [Drosophila melanogaster]
gi|194901262|ref|XP_001980171.1| GG20059 [Drosophila erecta]
gi|195349404|ref|XP_002041235.1| GM15444 [Drosophila sechellia]
gi|7243684|gb|AAF43413.1|AF232773_1 SR family splicing factor SF2 [Drosophila melanogaster]
gi|7331146|gb|AAF60294.1|AF234157_1 SR family splicing factor [Drosophila melanogaster]
gi|7300132|gb|AAF55300.1| SF2, isoform A [Drosophila melanogaster]
gi|15292149|gb|AAK93343.1| LD40489p [Drosophila melanogaster]
gi|190651874|gb|EDV49129.1| GG20059 [Drosophila erecta]
gi|194122840|gb|EDW44883.1| GM15444 [Drosophila sechellia]
gi|220946268|gb|ACL85677.1| SF2-PA [synthetic construct]
gi|220955952|gb|ACL90519.1| SF2-PA [synthetic construct]
gi|383292748|gb|AFH06457.1| SF2, isoform B [Drosophila melanogaster]
Length = 255
Score = 174 bits (440), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 96/192 (50%), Positives = 132/192 (68%), Gaps = 11/192 (5%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M SR+ +YVGNLP D R ++++DLF+K+G + +DLK PP +AF+EFED RDA+D
Sbjct: 1 MGSRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADD 59
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV------SRRSDYRVLV 114
A++ RDGY++DGYRLRVE GG S + S G + ++RS YRV+V
Sbjct: 60 AVKARDGYDYDGYRLRVEFPRGGGPGSYRGGNRNDRSRDGGGRMGGRGPPAKRSQYRVMV 119
Query: 115 TGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR- 173
TGLP+S SWQDLKDHMR AGDVCF+ ++D +G+V++ ++DMKYAI+KLD S FR
Sbjct: 120 TGLPASGSWQDLKDHMREAGDVCFADTYKD---GSGVVEFLRHEDMKYAIKKLDDSRFRS 176
Query: 174 NAFSRSYVRVRE 185
+ +Y+RVRE
Sbjct: 177 HEGEVAYIRVRE 188
>gi|195501014|ref|XP_002097620.1| GE26323 [Drosophila yakuba]
gi|194183721|gb|EDW97332.1| GE26323 [Drosophila yakuba]
Length = 254
Score = 174 bits (440), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 96/192 (50%), Positives = 132/192 (68%), Gaps = 11/192 (5%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M SR+ +YVGNLP D R ++++DLF+K+G + +DLK PP +AF+EFED RDA+D
Sbjct: 1 MGSRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADD 59
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV------SRRSDYRVLV 114
A++ RDGY++DGYRLRVE GG S + S G + ++RS YRV+V
Sbjct: 60 AVKARDGYDYDGYRLRVEFPRGGGPGSYRGGNRNDRSRDGGGRMGGRGPPAKRSQYRVMV 119
Query: 115 TGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR- 173
TGLP+S SWQDLKDHMR AGDVCF+ ++D +G+V++ ++DMKYAI+KLD S FR
Sbjct: 120 TGLPASGSWQDLKDHMREAGDVCFADTYKD---GSGVVEFLRHEDMKYAIKKLDDSRFRS 176
Query: 174 NAFSRSYVRVRE 185
+ +Y+RVRE
Sbjct: 177 HEGEVAYIRVRE 188
>gi|348505538|ref|XP_003440318.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Oreochromis
niloticus]
Length = 244
Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 96/177 (54%), Positives = 124/177 (70%), Gaps = 5/177 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R ++VED+FYKYG I DIDLK P +AF+EFED RDA+DA+ GRDGY
Sbjct: 16 IYVGNLPPDIRTKDVEDVFYKYGTIRDIDLKNRRGGPPFAFIEFEDPRDADDAVYGRDGY 75
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
++DGYRLRVE GR + G SRRS+YRV+V+GLP S SWQDLKD
Sbjct: 76 DYDGYRLRVEFPRSGRGSRGGFGIGGA-PRGRYGPPSRRSEYRVVVSGLPQSGSWQDLKD 134
Query: 129 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 184
HMR AGDVC++ V+RD TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 135 HMREAGDVCYADVYRD---GTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 188
>gi|402899743|ref|XP_003912847.1| PREDICTED: serine/arginine-rich splicing factor 1 [Papio anubis]
Length = 375
Score = 173 bits (439), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 95/179 (53%), Positives = 123/179 (68%), Gaps = 6/179 (3%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 145 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 204
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
++DGYRLRVE GR + R SRRS+ RV+V+GLP S SWQDL
Sbjct: 205 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 264
Query: 127 KDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 184
KDHMR AGDVC++ V+RD TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 265 KDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 320
>gi|334322457|ref|XP_003340247.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Monodelphis
domestica]
gi|395531888|ref|XP_003768005.1| PREDICTED: serine/arginine-rich splicing factor 1 [Sarcophilus
harrisii]
Length = 249
Score = 173 bits (439), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 95/180 (52%), Positives = 122/180 (67%), Gaps = 7/180 (3%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV---SRRSDYRVLVTGLPSSASWQD 125
++DGYRLRVE GR SRRS+YRV+V+GLP S SWQD
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGGAPRGRYGPPSRRSEYRVVVSGLPPSGSWQD 137
Query: 126 LKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 184
LKDHMR AGDVC++ V+RD TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 138 LKDHMREAGDVCYADVYRD---GTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 194
>gi|308466765|ref|XP_003095634.1| hypothetical protein CRE_13671 [Caenorhabditis remanei]
gi|308244633|gb|EFO88585.1| hypothetical protein CRE_13671 [Caenorhabditis remanei]
Length = 328
Score = 173 bits (439), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 117/277 (42%), Positives = 167/277 (60%), Gaps = 18/277 (6%)
Query: 8 TLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRP-PGYAFLEFEDYRDAEDAIRGRD 66
T+YVGNLP + R +E+ED+F+KYG I +ID+K R P +AF++F+D RDA++A+R RD
Sbjct: 5 TVYVGNLPSNVREKEIEDIFHKYGEIRNIDIKSRSRDSPAFAFIQFDDRRDAKEAVRARD 64
Query: 67 GYNFDGYRLRVELAHGGRRHSSSMDRYSSYSS--GGSRGVSRRSDYRVLVTGLPSSASWQ 124
GY FDG RLRVE G S G + G +RS+YR++V GLP S SWQ
Sbjct: 65 GYEFDGKRLRVEFPRGQGPRGPGGRPTRDNGSRFGRNGGPPKRSNYRLIVEGLPRSGSWQ 124
Query: 125 DLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 183
D+KDH+++AG++C++ V G+V++ Y+D++YAIRK D ++FR + +Y+R+
Sbjct: 125 DIKDHLKQAGEICYANVH----NGEGVVEFERYEDLEYAIRKYDDTKFRSHKGETAYIRL 180
Query: 184 RE-------YDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYSPRGK 236
+E + RR+ S S S+SP R S S R+ S S +SRS SP +
Sbjct: 181 KEDKSEYAKENKRRTRSISRSKSPIRGRCSRSSSRSKSSIRGRRNGSAS-KSRSRSPVSR 239
Query: 237 YSR-RSPSLSPARSASQ-RSPSGSPPRSFSRSGSFAR 271
R RS S SPAR S+ RSP R+ S SG+ AR
Sbjct: 240 QHRDRSESGSPARRVSRSRSPISRQRRARSESGTPAR 276
>gi|299469752|emb|CBN76606.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 330
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 91/187 (48%), Positives = 123/187 (65%), Gaps = 15/187 (8%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+GNLP D ++++D+FYK+G IVDIDLK P RPP + F+ F+D RDAE+A+R RDGY
Sbjct: 4 IYIGNLPMDVTEKDMDDVFYKFGRIVDIDLKTPARPPAFGFITFQDARDAEEAVRARDGY 63
Query: 69 NFDGYRLRVELAHGGR------------RHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTG 116
+ DG RLRVE++ G R R M G ++++YRV+VTG
Sbjct: 64 DMDGSRLRVEISRGRRDPFGMGGGGHGGRMGMPMGGGRGGFGGRGGAGFQQTEYRVIVTG 123
Query: 117 LPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAF 176
LP SASWQDLKDHMR+AG+ ++ V +GG GIV + + DDM YA+RKLD S+FRN F
Sbjct: 124 LPPSASWQDLKDHMRKAGEPTYTDVDH-KGG--GIVHFRTRDDMDYALRKLDGSDFRNPF 180
Query: 177 SRSYVRV 183
+S + V
Sbjct: 181 EKSRISV 187
>gi|11527011|gb|AAG36874.1|AF242767_1 SF2 [Caenorhabditis elegans]
Length = 258
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/194 (50%), Positives = 125/194 (64%), Gaps = 17/194 (8%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
+ +YVGNLPGD R +EVED+F+KYG I +D+K R P +AF+EFED+RDAEDA+R
Sbjct: 7 EDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIK-SGRGPAFAFVEFEDHRDAEDAVRA 65
Query: 65 RDGYNFDGYRLRVELAHG-------GRRHSSSMDRYSSYSSGGSRGVSRRSD-----YRV 112
RDGY FDG R+RVE G GR D GG G YRV
Sbjct: 66 RDGYEFDGRRIRVEFTRGVGPRGPSGRPLQDGGDHRGGDFRGGRGGGRGGGPQRRTGYRV 125
Query: 113 LVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
+V GLP + SWQDLKDHMR AGDVC++ V RD TG+V++T Y+D+KYA+RKLD ++F
Sbjct: 126 IVEGLPPTGSWQDLKDHMRDAGDVCYADVARD---GTGVVEFTRYEDVKYAVRKLDDTKF 182
Query: 173 R-NAFSRSYVRVRE 185
R + +Y+RVRE
Sbjct: 183 RSHEGETAYIRVRE 196
>gi|308459689|ref|XP_003092160.1| hypothetical protein CRE_20046 [Caenorhabditis remanei]
gi|308254090|gb|EFO98042.1| hypothetical protein CRE_20046 [Caenorhabditis remanei]
Length = 333
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/291 (39%), Positives = 166/291 (57%), Gaps = 45/291 (15%)
Query: 8 TLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRP-PGYAFLEFEDYRDAEDAIRGRD 66
T+YVGNLP D R +E+ED+F+KYG I +ID+K R P +AF++F+D RDA++A+R RD
Sbjct: 5 TVYVGNLPSDVREKEIEDIFHKYGEIRNIDIKSRSRDSPAFAFIQFDDRRDAKEAVRARD 64
Query: 67 GYNFDGYRLRVELAHGGRRHSSSMDRYSSYSS--GGSRGVSRRSDYRVLVTGLPSSASWQ 124
GY FDG RLRVE G S G + G +RS+YR++V GLP S SWQ
Sbjct: 65 GYEFDGKRLRVEFPRGQGPRGPGGRPTRDNGSRFGRNGGPPKRSNYRLIVEGLPRSGSWQ 124
Query: 125 DLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 183
D+KDH+++AG++C++ V G+V++ Y+D++YA RK D ++FR + +Y+R+
Sbjct: 125 DIKDHLKQAGEICYANVH----NGEGVVEFERYEDLEYAFRKYDDTKFRSHKGETAYIRL 180
Query: 184 REYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSY--------------SPRSR 229
+E +S Y ++ R+ SRS+SP R S + +SR
Sbjct: 181 KE-----------DKSEYAKENKRRTRSISRSKSPIRGRSSSRSKSSIRGRRTGSASKSR 229
Query: 230 SYSPRGKYSR-RSPSLSPARSASQ-----------RSPSGSPPRSFSRSGS 268
S SP ++ R RS S SPAR S+ RS SG+P R +RS S
Sbjct: 230 SRSPVSRHHRDRSESGSPARRVSRSRSPISRQRPARSESGTPARRATRSRS 280
>gi|170591729|ref|XP_001900622.1| SF2 [Brugia malayi]
gi|158591774|gb|EDP30377.1| SF2, putative [Brugia malayi]
Length = 277
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 100/193 (51%), Positives = 126/193 (65%), Gaps = 12/193 (6%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M+ R +Y+GNLP D R R++EDLFYKYG I ID+K+ P +AF+EF+D RDA D
Sbjct: 41 MAGRRDCRVYIGNLPPDIRQRDLEDLFYKYGHINFIDVKLTRGAP-FAFIEFDDPRDARD 99
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSG-------GSRGVSRRSDYRVL 113
AIRGRDGY DG R+RVE+ G G RG RRS YRVL
Sbjct: 100 AIRGRDGYELDGCRIRVEMTRGVGPRGPGGRPLYGPDRGERDRRPPPPRGPPRRSGYRVL 159
Query: 114 VTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
VTGLP + SWQDLKDHMR AGD+C++ VF+D TG+V+YT DDMKYAI+KLD ++F+
Sbjct: 160 VTGLPVTGSWQDLKDHMREAGDICYADVFKDG---TGVVEYTRQDDMKYAIKKLDDTKFK 216
Query: 174 -NAFSRSYVRVRE 185
+ SY+RV+E
Sbjct: 217 SHEGETSYIRVKE 229
>gi|195451089|ref|XP_002072763.1| GK13511 [Drosophila willistoni]
gi|194168848|gb|EDW83749.1| GK13511 [Drosophila willistoni]
Length = 263
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/195 (49%), Positives = 132/195 (67%), Gaps = 14/195 (7%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M SR+ +YVGNLP D R ++++DLF+K+G + +DLK PP +AF+EFED RDA+D
Sbjct: 1 MGSRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADD 59
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV---------SRRSDYR 111
A++ RDGY++DGYRLRVE GG S + + G G ++RS YR
Sbjct: 60 AVKARDGYDYDGYRLRVEFPRGGGPGSYRGGNRNDRNRDGGGGGGRMGGRGPPAKRSQYR 119
Query: 112 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSE 171
V+VTGLP+S SWQDLKDHMR AGDVCF+ ++D +G+V++ ++DMKYAI+KLD S
Sbjct: 120 VMVTGLPTSGSWQDLKDHMREAGDVCFADTYKD---GSGVVEFLRHEDMKYAIKKLDDSR 176
Query: 172 FR-NAFSRSYVRVRE 185
FR + +Y+RVRE
Sbjct: 177 FRSHEGEVAYIRVRE 191
>gi|63101956|gb|AAH95586.1| Sfrs1 protein [Danio rerio]
gi|182889684|gb|AAI65510.1| Sfrs1 protein [Danio rerio]
Length = 258
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/179 (54%), Positives = 123/179 (68%), Gaps = 6/179 (3%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R ++VED+FYKYG I DIDLK +AF+EFED RDAEDA+ GRDGY
Sbjct: 17 IYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGQPFAFVEFEDPRDAEDAVYGRDGY 76
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR--GVSRRSDYRVLVTGLPSSASWQDL 126
++DGYRLRVE GR + R SRRS+YRV+V+GLP S SWQDL
Sbjct: 77 DYDGYRLRVEFPRSGRGGGRGGGGGGGVGAPRGRYGPPSRRSEYRVIVSGLPPSGSWQDL 136
Query: 127 KDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 184
KDHMR AGDVC++ VFRD TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 137 KDHMREAGDVCYADVFRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 192
>gi|34785174|gb|AAH56752.1| Sfrs1 protein [Danio rerio]
Length = 188
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/167 (56%), Positives = 117/167 (70%), Gaps = 5/167 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R ++VED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 17 IYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 76
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR--GVSRRSDYRVLVTGLPSSASWQDL 126
++DGYRLRVE GR + R SRRS+YRV+V+GLP S SWQDL
Sbjct: 77 DYDGYRLRVEFPRSGRGGGRGGGGGGGVGAPRGRYGPPSRRSEYRVIVSGLPPSGSWQDL 136
Query: 127 KDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
KDHMR AGDVC++ VFRD TG+V++ +DM YA+RKLD ++FR
Sbjct: 137 KDHMREAGDVCYADVFRDG---TGVVEFVRKEDMTYAVRKLDNTKFR 180
>gi|395845812|ref|XP_003795615.1| PREDICTED: serine/arginine-rich splicing factor 1 [Otolemur
garnettii]
Length = 312
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/179 (53%), Positives = 123/179 (68%), Gaps = 6/179 (3%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 82 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 141
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
++DGYRLRVE GR + R SRRS+ RV+V+GLP S SWQDL
Sbjct: 142 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 201
Query: 127 KDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 184
KDHMR AGDVC++ V+RD TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 202 KDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 257
>gi|306966179|ref|NP_001182476.1| splicing factor, arginine/serine-rich 1B [Pan troglodytes]
gi|291405734|ref|XP_002719321.1| PREDICTED: splicing factor, arginine/serine-rich 1 [Oryctolagus
cuniculus]
gi|297272653|ref|XP_001103473.2| PREDICTED: splicing factor, arginine/serine-rich 1-like isoform 1
[Macaca mulatta]
gi|348562139|ref|XP_003466868.1| PREDICTED: serine/arginine-rich splicing factor 1-like isoform 2
[Cavia porcellus]
gi|119614898|gb|EAW94492.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_g [Homo sapiens]
Length = 253
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/179 (53%), Positives = 123/179 (68%), Gaps = 6/179 (3%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
++DGYRLRVE GR + R SRRS+ RV+V+GLP S SWQDL
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137
Query: 127 KDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 184
KDHMR AGDVC++ V+RD TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 138 KDHMREAGDVCYADVYRD---GTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 193
>gi|321460885|gb|EFX71923.1| hypothetical protein DAPPUDRAFT_59706 [Daphnia pulex]
Length = 255
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 100/200 (50%), Positives = 129/200 (64%), Gaps = 20/200 (10%)
Query: 2 SSRSSRT-LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
SSR++ +YVGNLP D R +++EDLFYK+G I IDLK PP +AF+EFED RDAED
Sbjct: 3 SSRNNEARIYVGNLPPDIRTKDIEDLFYKFGKIAYIDLKNRRGPP-FAFVEFEDPRDAED 61
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--------------SR 106
A+ RDGY++DGYRLRVE G + G G +R
Sbjct: 62 AVHARDGYDYDGYRLRVEFPRGSQNSGGGHSGGRGGDGGRGGGDGGGSNGGGRSRGPPAR 121
Query: 107 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 166
R++YRV+VTGLP + SWQDLKDHMR AGDVC++ ++D TG+V++ Y+DMKYAI+K
Sbjct: 122 RTNYRVIVTGLPPTGSWQDLKDHMREAGDVCYADTYKD---GTGMVEFLRYEDMKYAIKK 178
Query: 167 LDRSEFR-NAFSRSYVRVRE 185
LD S FR + SYVRV+E
Sbjct: 179 LDDSRFRSHEGEVSYVRVKE 198
>gi|312074323|ref|XP_003139919.1| arginine/serine-rich splicing factor 1 [Loa loa]
gi|307764921|gb|EFO24155.1| arginine/serine-rich splicing factor 1 [Loa loa]
gi|393908262|gb|EJD74982.1| arginine/serine-rich splicing factor 1, variant 1 [Loa loa]
gi|393908263|gb|EJD74983.1| arginine/serine-rich splicing factor 1, variant 2 [Loa loa]
gi|393908264|gb|EJD74984.1| arginine/serine-rich splicing factor 1, variant 3 [Loa loa]
gi|393908265|gb|EJD74985.1| arginine/serine-rich splicing factor 1, variant 4 [Loa loa]
gi|402591888|gb|EJW85817.1| hypothetical protein WUBG_03274 [Wuchereria bancrofti]
Length = 237
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 100/193 (51%), Positives = 126/193 (65%), Gaps = 12/193 (6%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M+ R +Y+GNLP D R R++EDLFYKYG I ID+K+ P +AF+EF+D RDA D
Sbjct: 1 MAGRRDCRVYIGNLPPDIRQRDLEDLFYKYGHINFIDVKLTRGAP-FAFIEFDDPRDARD 59
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSG-------GSRGVSRRSDYRVL 113
AIRGRDGY DG R+RVE+ G G RG RRS YRVL
Sbjct: 60 AIRGRDGYELDGCRIRVEMTRGVGPRGPGGRPLYGPDRGERDRRPPPPRGPPRRSGYRVL 119
Query: 114 VTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
VTGLP + SWQDLKDHMR AGD+C++ VF+D TG+V+YT DDMKYAI+KLD ++F+
Sbjct: 120 VTGLPVTGSWQDLKDHMREAGDICYADVFKDG---TGVVEYTRQDDMKYAIKKLDDTKFK 176
Query: 174 -NAFSRSYVRVRE 185
+ SY+RV+E
Sbjct: 177 SHEGETSYIRVKE 189
>gi|417409273|gb|JAA51151.1| Putative splicing factor arginine/serine-rich 1-like protein,
partial [Desmodus rotundus]
Length = 278
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/179 (53%), Positives = 123/179 (68%), Gaps = 6/179 (3%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 48 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 107
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
++DGYRLRVE GR + R SRRS+ RV+V+GLP S SWQDL
Sbjct: 108 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 167
Query: 127 KDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 184
KDHMR AGDVC++ V+RD TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 168 KDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 223
>gi|308490885|ref|XP_003107634.1| CRE-RSP-3 protein [Caenorhabditis remanei]
gi|308250503|gb|EFO94455.1| CRE-RSP-3 protein [Caenorhabditis remanei]
Length = 262
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 98/197 (49%), Positives = 125/197 (63%), Gaps = 20/197 (10%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
+ +YVGNLPGD R +EVED+F+KYG I ID+K R P +AF+EFED+RDAEDA+R
Sbjct: 7 EDQKVYVGNLPGDVREKEVEDIFHKYGRIKYIDIK-SGRGPAFAFVEFEDHRDAEDAVRA 65
Query: 65 RDGYNFDGYRLRVELAHGGRRHSSSMDRYSS---------------YSSGGSRGVSRRSD 109
RDGY FDG R+RVE G + G G RR+
Sbjct: 66 RDGYEFDGRRIRVEFTRGVGPRGPGGRPLNEEGGGYRGGGDFRGGRGGGRGGGGPQRRTG 125
Query: 110 YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDR 169
YRV+V GLP + SWQDLKDHMR AGDVC++ V RD TG+V++T YDD+KYA+RKLD
Sbjct: 126 YRVIVEGLPPTGSWQDLKDHMREAGDVCYADVARD---GTGVVEFTRYDDVKYAVRKLDD 182
Query: 170 SEFR-NAFSRSYVRVRE 185
++FR + +Y+RVRE
Sbjct: 183 TKFRSHEGETAYIRVRE 199
>gi|60811245|gb|AAX36166.1| splicing factor arginine/serine-rich 1 [synthetic construct]
Length = 249
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 95/179 (53%), Positives = 123/179 (68%), Gaps = 6/179 (3%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
++DGYRLRVE GR + R SRRS+ RV+V+GLP S SWQDL
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137
Query: 127 KDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 184
KDHMR AGDVC++ V+RD TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 138 KDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 193
>gi|197099026|ref|NP_001126337.1| serine/arginine-rich splicing factor 1 [Pongo abelii]
gi|68724975|sp|Q5R7H2.3|SRSF1_PONAB RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Splicing factor, arginine/serine-rich 1
gi|55731147|emb|CAH92288.1| hypothetical protein [Pongo abelii]
Length = 248
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 95/179 (53%), Positives = 123/179 (68%), Gaps = 6/179 (3%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
++DGYRLRVE GR + R SRRS+ RV+V+GLP S SWQDL
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137
Query: 127 KDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 184
KDHMR AGDVC++ V+RD TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 138 KDHMREAGDVCYADVYRD---GTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 193
>gi|5902076|ref|NP_008855.1| serine/arginine-rich splicing factor 1 isoform 1 [Homo sapiens]
gi|34328400|ref|NP_775550.2| serine/arginine-rich splicing factor 1 isoform 1 [Mus musculus]
gi|83921643|ref|NP_001033096.1| serine/arginine-rich splicing factor 1 [Sus scrofa]
gi|115497078|ref|NP_001069862.1| serine/arginine-rich splicing factor 1 [Bos taurus]
gi|157818019|ref|NP_001103022.1| splicing factor, arginine/serine-rich 1B [Rattus norvegicus]
gi|306966181|ref|NP_001182477.1| splicing factor, arginine/serine-rich 1 [Equus caballus]
gi|306966183|ref|NP_001182478.1| splicing factor, arginine/serine-rich 1 [Macaca mulatta]
gi|73966540|ref|XP_866729.1| PREDICTED: serine/arginine-rich splicing factor 1 isoform 2 [Canis
lupus familiaris]
gi|296202380|ref|XP_002748436.1| PREDICTED: serine/arginine-rich splicing factor 1-like isoform 1
[Callithrix jacchus]
gi|332246407|ref|XP_003272345.1| PREDICTED: serine/arginine-rich splicing factor 1 [Nomascus
leucogenys]
gi|344285799|ref|XP_003414647.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Loxodonta
africana]
gi|397493084|ref|XP_003817443.1| PREDICTED: serine/arginine-rich splicing factor 1 [Pan paniscus]
gi|403279712|ref|XP_003931390.1| PREDICTED: serine/arginine-rich splicing factor 1 [Saimiri
boliviensis boliviensis]
gi|410980663|ref|XP_003996696.1| PREDICTED: serine/arginine-rich splicing factor 1 [Felis catus]
gi|426347344|ref|XP_004041313.1| PREDICTED: serine/arginine-rich splicing factor 1 [Gorilla gorilla
gorilla]
gi|730773|sp|Q07955.2|SRSF1_HUMAN RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Alternative-splicing factor 1; Short=ASF-1;
AltName: Full=Splicing factor, arginine/serine-rich 1;
AltName: Full=pre-mRNA-splicing factor SF2, P33 subunit
gi|68725069|sp|Q6PDM2.3|SRSF1_MOUSE RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=ASF/SF2; AltName: Full=Pre-mRNA-splicing factor
SRp30a; AltName: Full=Splicing factor,
arginine/serine-rich 1
gi|114152157|sp|Q3YLA6.3|SRSF1_PIG RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Splicing factor, arginine/serine-rich 1
gi|122145605|sp|Q0VCY7.1|SRSF1_BOVIN RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Splicing factor, arginine/serine-rich 1
gi|179075|gb|AAA35565.1| alternative [Homo sapiens]
gi|338047|gb|AAA03476.1| SF2p33 [Homo sapiens]
gi|16307434|gb|AAH10264.1| Splicing factor, arginine/serine-rich 1 [Homo sapiens]
gi|21104372|dbj|BAB93456.1| OK/SW-cl.3 [Homo sapiens]
gi|28386236|gb|AAH46773.1| Sfrs1 protein [Mus musculus]
gi|35192949|gb|AAH58627.1| Splicing factor, arginine/serine-rich 1 (ASF/SF2) [Mus musculus]
gi|61364743|gb|AAX42596.1| splicing factor arginine/serine-rich 1 [synthetic construct]
gi|73810229|gb|AAZ86088.1| splicing factor arginine/serine-rich 1 [Sus scrofa]
gi|73810231|gb|AAZ86089.1| splicing factor arginine/serine-rich 1 [Sus scrofa]
gi|74151692|dbj|BAE29641.1| unnamed protein product [Mus musculus]
gi|111306978|gb|AAI19931.1| Splicing factor, arginine/serine-rich 1 [Bos taurus]
gi|119614891|gb|EAW94485.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_a [Homo sapiens]
gi|119614892|gb|EAW94486.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_a [Homo sapiens]
gi|149053807|gb|EDM05624.1| rCG34610, isoform CRA_c [Rattus norvegicus]
gi|189053478|dbj|BAG35644.1| unnamed protein product [Homo sapiens]
gi|296477057|tpg|DAA19172.1| TPA: splicing factor, arginine/serine-rich 1 [Bos taurus]
gi|336088097|dbj|BAK39908.1| splicing factor, arginine/serine-rich 1, transcript variant 1
[Cricetulus griseus]
gi|344243483|gb|EGV99586.1| Splicing factor, arginine/serine-rich 1 [Cricetulus griseus]
gi|380784743|gb|AFE64247.1| serine/arginine-rich splicing factor 1 isoform 1 [Macaca mulatta]
gi|383420721|gb|AFH33574.1| serine/arginine-rich splicing factor 1 isoform 1 [Macaca mulatta]
gi|384941916|gb|AFI34563.1| serine/arginine-rich splicing factor 1 isoform 1 [Macaca mulatta]
gi|410224700|gb|JAA09569.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410263644|gb|JAA19788.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410308964|gb|JAA33082.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410351427|gb|JAA42317.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410351431|gb|JAA42319.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|431890828|gb|ELK01707.1| Splicing factor, arginine/serine-rich 1 [Pteropus alecto]
Length = 248
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 95/179 (53%), Positives = 123/179 (68%), Gaps = 6/179 (3%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
++DGYRLRVE GR + R SRRS+ RV+V+GLP S SWQDL
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137
Query: 127 KDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 184
KDHMR AGDVC++ V+RD TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 138 KDHMREAGDVCYADVYRD---GTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 193
>gi|291228500|ref|XP_002734208.1| PREDICTED: splicing factor, arginine/serine-rich 1-like isoform 2
[Saccoglossus kowalevskii]
Length = 244
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 99/193 (51%), Positives = 127/193 (65%), Gaps = 20/193 (10%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R++++ED+FYKYG I+DIDLK PP ++F+EFED RDAEDA+RGRDGY
Sbjct: 16 IYVGNLPPDIRVKDIEDIFYKYGNILDIDLKNRRGPP-FSFVEFEDKRDAEDAVRGRDGY 74
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRR---------------SDYRVL 113
++DGYRLRVE GGR GG G S+YR L
Sbjct: 75 DYDGYRLRVEFPRGGRAGGGPPRGIGGGGGGGGGGGGGLGGGPGRGRGGPPARRSEYRCL 134
Query: 114 VTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
V+GLP + SWQDLKDHMR AGDVCF+ V+RD TG+V++ Y+DMKYA + LD ++FR
Sbjct: 135 VSGLPPTGSWQDLKDHMREAGDVCFADVYRDG---TGVVEFLRYEDMKYAAKHLDDTKFR 191
Query: 174 -NAFSRSYVRVRE 185
+ SY+RV+E
Sbjct: 192 SHEGETSYIRVKE 204
>gi|118835441|gb|AAI28932.1| Sfrs1 protein [Xenopus laevis]
Length = 294
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 100/195 (51%), Positives = 126/195 (64%), Gaps = 22/195 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 48 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 107
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV------------------SRRSDY 110
++DGYRLRVE GR SGG G SRRS+Y
Sbjct: 108 DYDGYRLRVEFPRSGRGAGGRGGGGGGGGSGGGGGGGGGGGGGGGAPRGRYGPPSRRSEY 167
Query: 111 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRS 170
RV+V+GLP S SWQDLKDHMR AGDVC++ VFRD TG+V++ +DM YA+RKLD +
Sbjct: 168 RVVVSGLPPSGSWQDLKDHMREAGDVCYADVFRDG---TGVVEFVRKEDMTYAVRKLDNT 224
Query: 171 EFR-NAFSRSYVRVR 184
+FR + +Y+RV+
Sbjct: 225 KFRSHEGETAYIRVK 239
>gi|114108043|gb|AAI23123.1| Sfrs1 protein [Xenopus laevis]
Length = 296
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 100/195 (51%), Positives = 126/195 (64%), Gaps = 22/195 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 50 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 109
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV------------------SRRSDY 110
++DGYRLRVE GR SGG G SRRS+Y
Sbjct: 110 DYDGYRLRVEFPRSGRGAGGRGGGGGGGGSGGGGGGGGGGGGGGGAPRGRYGPPSRRSEY 169
Query: 111 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRS 170
RV+V+GLP S SWQDLKDHMR AGDVC++ VFRD TG+V++ +DM YA+RKLD +
Sbjct: 170 RVVVSGLPPSGSWQDLKDHMREAGDVCYADVFRDG---TGVVEFVRKEDMTYAVRKLDNT 226
Query: 171 EFR-NAFSRSYVRVR 184
+FR + +Y+RV+
Sbjct: 227 KFRSHEGETAYIRVK 241
>gi|308459677|ref|XP_003092154.1| hypothetical protein CRE_20061 [Caenorhabditis remanei]
gi|308254084|gb|EFO98036.1| hypothetical protein CRE_20061 [Caenorhabditis remanei]
Length = 336
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 116/277 (41%), Positives = 166/277 (59%), Gaps = 18/277 (6%)
Query: 8 TLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRP-PGYAFLEFEDYRDAEDAIRGRD 66
T+YVGNLP D R +E+ED+F+KYG I +ID+K R P +AF++F+D RDA++A+R D
Sbjct: 5 TVYVGNLPSDVREKEIEDIFHKYGEIRNIDIKSRSRDSPAFAFIQFDDRRDAKEAVRACD 64
Query: 67 GYNFDGYRLRVELAHGGRRHSSSMDRYSSYSS--GGSRGVSRRSDYRVLVTGLPSSASWQ 124
GY FDG RLRVE G S G + G +RS+YR++V GLP S SWQ
Sbjct: 65 GYEFDGKRLRVEFPRGKGPRGPGGRPTRDNGSRFGRNGGPPKRSNYRLIVEGLPRSGSWQ 124
Query: 125 DLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 183
D+KDH+++AG++C++ V G+V++ Y++++YAIRK D ++FR + +Y+R+
Sbjct: 125 DIKDHLKQAGEICYANVH----NGEGVVEFERYENLEYAIRKYDDTKFRSHKGETAYIRL 180
Query: 184 RE-------YDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYSPRGK 236
+E + RR+ S S S+SP R S S R+ S S +SRS SP +
Sbjct: 181 KEDKSEYAKENKRRTRSISRSKSPNRGRCSRSSSRSKSSIRGRRTGSAS-KSRSRSPVSR 239
Query: 237 YSR-RSPSLSPARSASQ-RSPSGSPPRSFSRSGSFAR 271
R RS S SPAR S+ RSP R+ S SG+ AR
Sbjct: 240 QHRDRSESGSPARRVSRSRSPISRQRRARSESGTPAR 276
>gi|324512727|gb|ADY45260.1| Splicing factor, arginine/serine-rich 3 [Ascaris suum]
Length = 242
Score = 170 bits (431), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 112/222 (50%), Positives = 143/222 (64%), Gaps = 15/222 (6%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M SR +YVGNLP + + R++EDLF KYG I ID+K P +AFLEFED RDAED
Sbjct: 1 MGSRRDCRVYVGNLPSNVKQRDLEDLFDKYGRICFIDVKYSRGAP-FAFLEFEDSRDAED 59
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRR------SDYRVLV 114
AIRGRDGY+ DG R+RVE+ G R + R S YRV++
Sbjct: 60 AIRGRDGYDLDGCRIRVEMTRGVGPRGPGGRPIYGGGGYDRRPPAPRGPPVRRSGYRVII 119
Query: 115 TGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR- 173
+GLP+S SWQDLKDHMR AGD+C++ V++D TG+V+YT YDDMKYA+RKLD ++F+
Sbjct: 120 SGLPASGSWQDLKDHMRDAGDICYADVYKD---GTGVVEYTKYDDMKYAVRKLDDTKFKS 176
Query: 174 NAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRS 215
+ SY+RVRE S RS SR+ SRSP+ R SP YS +
Sbjct: 177 HEGDTSYIRVREA-SARSRSRTRSRSPHTKRD---SPQYSPA 214
>gi|25150290|ref|NP_499649.2| Protein RSP-3 [Caenorhabditis elegans]
gi|56749665|sp|Q9NEW6.2|RSP3_CAEEL RecName: Full=Probable splicing factor, arginine/serine-rich 3;
AltName: Full=CeSF2; AltName: Full=CeSF2/ASF
gi|21615505|emb|CAC35847.2| Protein RSP-3 [Caenorhabditis elegans]
Length = 258
Score = 170 bits (431), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 97/196 (49%), Positives = 125/196 (63%), Gaps = 21/196 (10%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
+ +YVGNLPGD R +EVED+F+KYG I +D+K R P +AF+EFED+RDAEDA+R
Sbjct: 7 EDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIK-SGRGPAFAFVEFEDHRDAEDAVRA 65
Query: 65 RDGYNFDGYRLRVE--------------LAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDY 110
RDGY FDG R+RVE L GG G RR+ Y
Sbjct: 66 RDGYEFDGRRIRVEFTRGVGPRGPGGRPLQDGGDHRGGDFRGGRGGGR--GGGPQRRTGY 123
Query: 111 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRS 170
RV+V GLP + SWQDLKDHMR AGDVC++ V RD TG+V++T Y+D+KYA+RKLD +
Sbjct: 124 RVIVEGLPPTGSWQDLKDHMRDAGDVCYADVARD---GTGVVEFTRYEDVKYAVRKLDDT 180
Query: 171 EFR-NAFSRSYVRVRE 185
+FR + +Y+RVRE
Sbjct: 181 KFRSHEGETAYIRVRE 196
>gi|269849649|sp|Q7SXP4.2|SRS1A_DANRE RecName: Full=Serine/arginine-rich splicing factor 1A; AltName:
Full=Splicing factor, arginine/serine-rich 1; AltName:
Full=Splicing factor, arginine/serine-rich 1A
gi|157423199|gb|AAI53597.1| Sfrs1l protein [Danio rerio]
gi|157423322|gb|AAI53598.1| Sfrs1l protein [Danio rerio]
Length = 257
Score = 170 bits (431), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 99/189 (52%), Positives = 124/189 (65%), Gaps = 16/189 (8%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R ++VED+FYKYG I DIDLK P +AF+EFED RDAEDA+ RDGY
Sbjct: 17 IYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYARDGY 76
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV------------SRRSDYRVLVTG 116
++DGYRLRVE GR GG G SRRS+YRV+V+G
Sbjct: 77 DYDGYRLRVEFPRSGRGMGRGGFGGGGGGGGGGGGGGGGAPRGRYGPPSRRSEYRVIVSG 136
Query: 117 LPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NA 175
LP S SWQDLKDHMR AGDVC++ VFRD TG+V++ +DM YA+RKLD ++FR +
Sbjct: 137 LPPSGSWQDLKDHMREAGDVCYADVFRD---GTGVVEFVRKEDMTYAVRKLDNTKFRSHE 193
Query: 176 FSRSYVRVR 184
+Y+RV+
Sbjct: 194 GETAYIRVK 202
>gi|27503247|gb|AAH42354.1| Sfrs1 protein, partial [Xenopus laevis]
Length = 283
Score = 170 bits (431), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 100/195 (51%), Positives = 126/195 (64%), Gaps = 22/195 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 37 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 96
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV------------------SRRSDY 110
++DGYRLRVE GR SGG G SRRS+Y
Sbjct: 97 DYDGYRLRVEFPRSGRGAGGRGGGGGGGGSGGGGGGGGGGGGGGGAPRGRYGPPSRRSEY 156
Query: 111 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRS 170
RV+V+GLP S SWQDLKDHMR AGDVC++ VFRD TG+V++ +DM YA+RKLD +
Sbjct: 157 RVVVSGLPPSGSWQDLKDHMREAGDVCYADVFRDG---TGVVEFVRKEDMTYAVRKLDNT 213
Query: 171 EFR-NAFSRSYVRVR 184
+FR + +Y+RV+
Sbjct: 214 KFRSHEGETAYIRVK 228
>gi|47087630|ref|NP_998180.1| serine/arginine-rich splicing factor 1A [Danio rerio]
gi|33416587|gb|AAH55511.1| Splicing factor, arginine/serine-rich 1, like [Danio rerio]
Length = 245
Score = 170 bits (430), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 99/190 (52%), Positives = 124/190 (65%), Gaps = 17/190 (8%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R ++VED+FYKYG I DIDLK P +AF+EFED RDAEDA+ RDGY
Sbjct: 17 IYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYARDGY 76
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV-------------SRRSDYRVLVT 115
++DGYRLRVE GR GG G SRRS+YRV+V+
Sbjct: 77 DYDGYRLRVEFPRSGRGMGRGGFGGGGGGGGGGGGGGGGGAPRGRYGPPSRRSEYRVIVS 136
Query: 116 GLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-N 174
GLP S SWQDLKDHMR AGDVC++ VFRD TG+V++ +DM YA+RKLD ++FR +
Sbjct: 137 GLPPSGSWQDLKDHMREAGDVCYADVFRD---GTGVVEFVRKEDMTYAVRKLDNTKFRSH 193
Query: 175 AFSRSYVRVR 184
+Y+RV+
Sbjct: 194 EGETAYIRVK 203
>gi|410915734|ref|XP_003971342.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Takifugu
rubripes]
Length = 238
Score = 170 bits (430), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 95/177 (53%), Positives = 122/177 (68%), Gaps = 7/177 (3%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++EDLFYK+G I DIDLK P +AF+EFED RD+ DA+ RDGY
Sbjct: 17 IYVGNLPPDIRSKDIEDLFYKFGAIRDIDLKNRRGGPPFAFVEFEDPRDSGDAVYERDGY 76
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
++DGYRLRVE GGR G SRRSDYRV+V+GLP S SWQDLKD
Sbjct: 77 DYDGYRLRVEFPRGGRGGGGRGMGPPRTRYGPP---SRRSDYRVVVSGLPQSGSWQDLKD 133
Query: 129 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 184
HMR AGDVC++ V+RD TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 134 HMREAGDVCYTDVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 187
>gi|341889616|gb|EGT45551.1| hypothetical protein CAEBREN_06053 [Caenorhabditis brenneri]
Length = 260
Score = 170 bits (430), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 99/200 (49%), Positives = 126/200 (63%), Gaps = 25/200 (12%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
+ +YVGNLPGD R +EVED+F+KYG I ID+K R P +AF+EFED+RDAEDA+R
Sbjct: 8 EDQKVYVGNLPGDVRDKEVEDIFHKYGRIKYIDIK-SGRGPAFAFVEFEDHRDAEDAVRA 66
Query: 65 RDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGG------------------SRGVSR 106
RDGY FDG R+RVE G + GG G R
Sbjct: 67 RDGYEFDGRRIRVEFTRGVGPRGPGGRPLN--DDGGYSGGRDRGDYRGGRGGGRGGGPQR 124
Query: 107 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 166
R+ YRV+V GLP + SWQDLKDHMR AGDVC++ V RD TG+V++T YDD+KYA+RK
Sbjct: 125 RTGYRVIVEGLPPTGSWQDLKDHMREAGDVCYADVARD---GTGVVEFTRYDDVKYAVRK 181
Query: 167 LDRSEFR-NAFSRSYVRVRE 185
LD ++FR + +Y+RVRE
Sbjct: 182 LDDTKFRSHEGETAYIRVRE 201
>gi|62088696|dbj|BAD92795.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor) variant [Homo sapiens]
Length = 233
Score = 169 bits (429), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 95/182 (52%), Positives = 122/182 (67%), Gaps = 6/182 (3%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 50 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 109
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
++DGYRLRVE GR + R SRRS+ RV+V+GLP S SWQDL
Sbjct: 110 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 169
Query: 127 KDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREY 186
KDHMR AGDVC++ V+RD TG+V++ +DM YA+RKLD ++FR + Y R+ +
Sbjct: 170 KDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFR-SHEVGYTRILFF 225
Query: 187 DS 188
D
Sbjct: 226 DQ 227
>gi|179074|gb|AAA35564.1| alternative [Homo sapiens]
gi|119614894|gb|EAW94488.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_c [Homo sapiens]
Length = 292
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/167 (55%), Positives = 116/167 (69%), Gaps = 5/167 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
++DGYRLRVE GR + R SRRS+ RV+V+GLP S SWQDL
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137
Query: 127 KDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
KDHMR AGDVC++ V+RD TG+V++ +DM YA+RKLD ++FR
Sbjct: 138 KDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFR 181
>gi|351713363|gb|EHB16282.1| Splicing factor, arginine/serine-rich 1 [Heterocephalus glaber]
Length = 292
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/167 (55%), Positives = 116/167 (69%), Gaps = 5/167 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
++DGYRLRVE GR + R SRRS+ RV+V+GLP S SWQDL
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137
Query: 127 KDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
KDHMR AGDVC++ V+RD TG+V++ +DM YA+RKLD ++FR
Sbjct: 138 KDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFR 181
>gi|118582269|ref|NP_001071634.1| serine/arginine-rich splicing factor 1 isoform 2 [Homo sapiens]
gi|45708738|gb|AAH33785.1| SFRS1 protein [Homo sapiens]
gi|119614895|gb|EAW94489.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_d [Homo sapiens]
gi|168277706|dbj|BAG10831.1| splicing factor, arginine/serine-rich 1 [synthetic construct]
gi|410263646|gb|JAA19789.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410308966|gb|JAA33083.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410351429|gb|JAA42318.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
Length = 201
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 95/182 (52%), Positives = 122/182 (67%), Gaps = 6/182 (3%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
++DGYRLRVE GR + R SRRS+ RV+V+GLP S SWQDL
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137
Query: 127 KDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREY 186
KDHMR AGDVC++ V+RD TG+V++ +DM YA+RKLD ++FR + Y R+ +
Sbjct: 138 KDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFR-SHEVGYTRILFF 193
Query: 187 DS 188
D
Sbjct: 194 DQ 195
>gi|324504146|gb|ADY41791.1| Splicing factor, arginine/serine-rich 3 [Ascaris suum]
Length = 215
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/197 (51%), Positives = 130/197 (65%), Gaps = 22/197 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP R +++ED+F K+G ++ +DLK RPP +AF+EFED RDAEDA+R RDGY
Sbjct: 7 IYVGNLPTSVRTKDIEDIFTKFGKVLFVDLK-DKRPPYFAFVEFEDPRDAEDAVRSRDGY 65
Query: 69 NFDGYRLRVEL-------------AHGGRR--HSSSMDRYSSYSSGGSRGVSRRSDYRVL 113
+F GYRLRVE HG R S D GSR RR++YRV+
Sbjct: 66 DFYGYRLRVEFPRGVGPRGPGGRPLHGNDRGYSGSRGDGGYGGGGSGSRSGGRRTNYRVI 125
Query: 114 VTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
VTGLP+S SWQDLKDHMR AGDVC++ + RD TG+V+Y DDMKYAIRKLD ++F+
Sbjct: 126 VTGLPTSGSWQDLKDHMREAGDVCYADITRDG---TGVVEYARLDDMKYAIRKLDDTKFK 182
Query: 174 -NAF--SRSYVRVREYD 187
+ F +Y+RVRE D
Sbjct: 183 SHEFQGETAYIRVREDD 199
>gi|426236979|ref|XP_004023550.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 1 [Ovis aries]
Length = 190
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 91/165 (55%), Positives = 114/165 (69%), Gaps = 12/165 (7%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRXGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
++DGYRLRVE GR SRRS+ RV+V+GLP S SWQDLKD
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRRGRYGPP---------SRRSENRVVVSGLPPSGSWQDLKD 128
Query: 129 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
HMR AGDVC++ V+RD TG+V++ +DM YA+RKLD ++FR
Sbjct: 129 HMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFR 170
>gi|148669917|gb|EDL01864.1| splicing factor, arginine/serine-rich 1 (ASF/SF2), isoform CRA_b
[Mus musculus]
Length = 193
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/167 (55%), Positives = 116/167 (69%), Gaps = 5/167 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
++DGYRLRVE GR + R SRRS+ RV+V+GLP S SWQDL
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137
Query: 127 KDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
KDHMR AGDVC++ V+RD TG+V++ +DM YA+RKLD ++FR
Sbjct: 138 KDHMREAGDVCYADVYRD---GTGVVEFVRKEDMTYAVRKLDNTKFR 181
>gi|55742372|ref|NP_001006919.1| serine/arginine-rich splicing factor 1 [Xenopus (Silurana)
tropicalis]
gi|92058727|sp|Q6DII2.1|SRSF1_XENTR RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Splicing factor, arginine/serine-rich 1
gi|49523075|gb|AAH75558.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor) [Xenopus (Silurana)
tropicalis]
Length = 267
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/198 (50%), Positives = 125/198 (63%), Gaps = 25/198 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGYRLRVEL-----------------AHGGRRHSSSMDRYSSYSSGGSRG----VSRR 107
++DGYRLRVE GG G RG SRR
Sbjct: 78 DYDGYRLRVEFPRSGRGAGGRGGGGGGGGGGGGGGGGGGGGGGGGGGGAPRGRYGPPSRR 137
Query: 108 SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKL 167
S+YRV+V+GLP S SWQDLKDHMR AGDVC++ VFRD TG+V++ +DM YA+RKL
Sbjct: 138 SEYRVVVSGLPPSGSWQDLKDHMREAGDVCYADVFRD---GTGVVEFVRKEDMTYAVRKL 194
Query: 168 DRSEFR-NAFSRSYVRVR 184
D ++FR + +Y+RV+
Sbjct: 195 DNTKFRSHEGETAYIRVK 212
>gi|158260889|dbj|BAF82622.1| unnamed protein product [Homo sapiens]
Length = 248
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/179 (52%), Positives = 122/179 (68%), Gaps = 6/179 (3%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED +DAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPQDAEDAVYGRDGY 77
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
++DGYRLRVE GR + R SRRS+ RV+V+GLP S SWQDL
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137
Query: 127 KDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 184
KDHMR AGDVC++ V+RD TG V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 138 KDHMREAGDVCYADVYRD---GTGAVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 193
>gi|354472029|ref|XP_003498243.1| PREDICTED: serine/arginine-rich splicing factor 1 [Cricetulus
griseus]
Length = 201
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/167 (55%), Positives = 116/167 (69%), Gaps = 5/167 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
++DGYRLRVE GR + R SRRS+ RV+V+GLP S SWQDL
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137
Query: 127 KDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
KDHMR AGDVC++ V+RD TG+V++ +DM YA+RKLD ++FR
Sbjct: 138 KDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFR 181
>gi|417397107|gb|JAA45587.1| Putative serine/arginine-rich splicing factor 1 isoform 2 [Desmodus
rotundus]
Length = 207
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 92/167 (55%), Positives = 116/167 (69%), Gaps = 5/167 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
++DGYRLRVE GR + R SRRS+ RV+V+GLP S SWQDL
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137
Query: 127 KDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
KDHMR AGDVC++ V+RD TG+V++ +DM YA+RKLD ++FR
Sbjct: 138 KDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFR 181
>gi|336088099|dbj|BAK39909.1| splicing factor, arginine/serine-rich 1, transcript variant 2
[Cricetulus griseus]
Length = 201
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 92/167 (55%), Positives = 116/167 (69%), Gaps = 5/167 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
++DGYRLRVE GR + R SRRS+ RV+V+GLP S SWQDL
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137
Query: 127 KDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
KDHMR AGDVC++ V+RD TG+V++ +DM YA+RKLD ++FR
Sbjct: 138 KDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFR 181
>gi|118582271|ref|NP_001071635.1| serine/arginine-rich splicing factor 1 isoform 2 [Mus musculus]
gi|26347437|dbj|BAC37367.1| unnamed protein product [Mus musculus]
Length = 201
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 92/167 (55%), Positives = 116/167 (69%), Gaps = 5/167 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
++DGYRLRVE GR + R SRRS+ RV+V+GLP S SWQDL
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137
Query: 127 KDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
KDHMR AGDVC++ V+RD TG+V++ +DM YA+RKLD ++FR
Sbjct: 138 KDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFR 181
>gi|348562137|ref|XP_003466867.1| PREDICTED: serine/arginine-rich splicing factor 1-like isoform 1
[Cavia porcellus]
gi|380788319|gb|AFE66035.1| serine/arginine-rich splicing factor 1 isoform 2 [Macaca mulatta]
gi|383420723|gb|AFH33575.1| serine/arginine-rich splicing factor 1 isoform 2 [Macaca mulatta]
gi|384941914|gb|AFI34562.1| serine/arginine-rich splicing factor 1 isoform 2 [Macaca mulatta]
Length = 201
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 92/167 (55%), Positives = 116/167 (69%), Gaps = 5/167 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
++DGYRLRVE GR + R SRRS+ RV+V+GLP S SWQDL
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137
Query: 127 KDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
KDHMR AGDVC++ V+RD TG+V++ +DM YA+RKLD ++FR
Sbjct: 138 KDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFR 181
>gi|355754034|gb|EHH57999.1| hypothetical protein EGM_07756 [Macaca fascicularis]
Length = 248
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 94/179 (52%), Positives = 122/179 (68%), Gaps = 6/179 (3%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
++ GYRLRVE GR + R SRRS+ RV+V+GLP S SWQDL
Sbjct: 78 DYYGYRLRVEFPRSGRGTGRGGSGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137
Query: 127 KDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 184
KDHMR AGDVC++ V+RD TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 138 KDHMREAGDVCYADVYRD---GTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 193
>gi|348518531|ref|XP_003446785.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Oreochromis
niloticus]
Length = 264
Score = 167 bits (422), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 98/188 (52%), Positives = 124/188 (65%), Gaps = 15/188 (7%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R ++VEDLFYKYG I DIDLK P +AF++F+D RDAEDA+ GRDGY
Sbjct: 17 IYVGNLPPDIRSKDVEDLFYKYGSIRDIDLKNRRGGPPFAFVQFDDPRDAEDAVYGRDGY 76
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV-----------SRRSDYRVLVTGL 117
++DGYRLRVE GR GG G SRRS+ RV+V+GL
Sbjct: 77 DYDGYRLRVEFPRSGRGGGGGGGGGGGGGGGGGGGGMGPPRGRYGPPSRRSENRVVVSGL 136
Query: 118 PSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAF 176
P S SWQDLKDHMR AGDVC++ VFRD TG+V++ +DM YA+RKLD ++FR +
Sbjct: 137 PPSGSWQDLKDHMREAGDVCYADVFRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEG 193
Query: 177 SRSYVRVR 184
+Y+RV+
Sbjct: 194 ETAYIRVK 201
>gi|26383576|dbj|BAC25546.1| unnamed protein product [Mus musculus]
Length = 248
Score = 167 bits (422), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 91/167 (54%), Positives = 115/167 (68%), Gaps = 5/167 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
++DGYRLRVE GR + R SRR++ RV+V+GLP S SWQDL
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRAENRVVVSGLPPSGSWQDL 137
Query: 127 KDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
KDHMR AGDVC++ V+RD TG+V+ +DM YA+RKLD ++FR
Sbjct: 138 KDHMREAGDVCYADVYRD---GTGVVECVPKEDMTYAVRKLDNTKFR 181
>gi|297264540|ref|XP_001103237.2| PREDICTED: splicing factor, arginine/serine-rich 1-like [Macaca
mulatta]
Length = 300
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 91/179 (50%), Positives = 120/179 (67%), Gaps = 6/179 (3%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAED + GRDGY
Sbjct: 70 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDLRDAEDVVYGRDGY 129
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
++ GYRLRVE GR + R SRR + RV+V+GLP S SWQDL
Sbjct: 130 DYYGYRLRVEFPPSGRGTGRGGSGGGGGGAPRGRYGPPSRRCENRVVVSGLPPSGSWQDL 189
Query: 127 KDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 184
KDHMR AGDVC++ V+RD TG++++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 190 KDHMREAGDVCYADVYRDG---TGVMEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 245
>gi|324500331|gb|ADY40159.1| Splicing factor, arginine/serine-rich 3 [Ascaris suum]
Length = 244
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 119/265 (44%), Positives = 154/265 (58%), Gaps = 30/265 (11%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M SR +Y+GNLP D + R++EDLFYKYG I ID+K+ P +AF+EF+D RDA D
Sbjct: 1 MGSRRESRIYIGNLPSDVKQRDLEDLFYKYGRINYIDIKLSRGAP-FAFIEFDDPRDARD 59
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRR--------HSSSMDRYSSYSSGGSRGVSRRSDYRV 112
A+ GRDGY+ DG R+RVE+ G ++S DR RRS YRV
Sbjct: 60 AVHGRDGYDMDGCRIRVEMTRGVGPRGPGGRPLYASERDRDRRPPPAPRGPPPRRSGYRV 119
Query: 113 LVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
+V+GLPSS SWQDLKDHMR AGD+C++ V+RD TG+V+YT YDDMKYAIRKLD ++F
Sbjct: 120 IVSGLPSSGSWQDLKDHMRDAGDICYADVYRDG---TGVVEYTKYDDMKYAIRKLDDTKF 176
Query: 173 R-NAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSY 231
+ + SY+RVRE +S R SP YS +RS SRS S + +
Sbjct: 177 KSHEGDTSYIRVREANSHSRSRTRSRSP----RDSRGSPRYSPTRSQSRSRSRTRSASP- 231
Query: 232 SPRGKYSRRSPSLSPARSASQRSPS 256
+ RS+ RSPS
Sbjct: 232 ------------VGAGRSSHSRSPS 244
>gi|355565042|gb|EHH21531.1| hypothetical protein EGK_04623, partial [Macaca mulatta]
Length = 231
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 90/167 (53%), Positives = 114/167 (68%), Gaps = 5/167 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAED + GRDGY
Sbjct: 48 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDLRDAEDVVYGRDGY 107
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
++ GYRLRVE GR + R SRRS+ RV+V+GLP S SWQDL
Sbjct: 108 DYYGYRLRVEFPPSGRGTGRGGSGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 167
Query: 127 KDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
KDHMR AGDVC++ V+RD TG+V++ +DM YA+RKLD ++FR
Sbjct: 168 KDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFR 211
>gi|357134013|ref|XP_003568614.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor SF2-like
[Brachypodium distachyon]
Length = 169
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 96/172 (55%), Positives = 109/172 (63%), Gaps = 30/172 (17%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYK--------------------------YGPIV 34
MS +S T+Y+GNLP D R RE EDLFYK YG I+
Sbjct: 1 MSRWNSCTVYLGNLPNDIREREHEDLFYKDGVTPHHLDSTCGYHPIWVMQEDLHKYGRIL 60
Query: 35 DIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYS 94
DIDLK PPR P YAF+E DAEDAI G DGY+F ++VELAHGG S DR
Sbjct: 61 DIDLKXPPRRPVYAFVEVIYRCDAEDAIYGHDGYDF--XIIQVELAHGGT--GPSFDRLR 116
Query: 95 SYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG 146
SYSS G R +R S+YRV+VTGLPSSASWQDLKDHMRRAGDVCFS V+R+ G
Sbjct: 117 SYSSSGRREAARHSNYRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREAG 168
>gi|355568562|gb|EHH24843.1| hypothetical protein EGK_08569 [Macaca mulatta]
Length = 292
Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 90/167 (53%), Positives = 115/167 (68%), Gaps = 5/167 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
++ GYRLRVE GR + R SRRS+ RV+V+GLP S SWQDL
Sbjct: 78 DYYGYRLRVEFPPSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137
Query: 127 KDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
KDHMR AGDVC++ V+RD TG++++ +DM YA+RKLD ++FR
Sbjct: 138 KDHMREAGDVCYADVYRDG---TGVMEFVRKEDMTYAVRKLDNTKFR 181
>gi|301790878|ref|XP_002930446.1| PREDICTED: splicing factor, arginine/serine-rich 9-like [Ailuropoda
melanoleuca]
Length = 253
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/179 (53%), Positives = 124/179 (69%), Gaps = 16/179 (8%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++EDLFYKYG I +I+LK +AF+ FED RDAEDAI GR+GY
Sbjct: 48 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 107
Query: 69 NFDGYRLRVEL--AHGGRRHSSSMDRYSSYSSGGSRGV-SRRSDYRVLVTGLPSSASWQD 125
++ RLRVE +GGR + + GG G +RRSD+RVLV+GLP S SWQD
Sbjct: 108 DYGQCRLRVEFPRTYGGR---------AGWPRGGRNGPPTRRSDFRVLVSGLPPSGSWQD 158
Query: 126 LKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 183
LKDHMR AGDVC++ V +D GM G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 159 LKDHMREAGDVCYADVQKD--GM-GMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 214
>gi|281340832|gb|EFB16416.1| hypothetical protein PANDA_020890 [Ailuropoda melanoleuca]
Length = 215
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/179 (53%), Positives = 124/179 (69%), Gaps = 16/179 (8%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++EDLFYKYG I +I+LK +AF+ FED RDAEDAI GR+GY
Sbjct: 10 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 69
Query: 69 NFDGYRLRVEL--AHGGRRHSSSMDRYSSYSSGGSRGV-SRRSDYRVLVTGLPSSASWQD 125
++ RLRVE +GGR + + GG G +RRSD+RVLV+GLP S SWQD
Sbjct: 70 DYGQCRLRVEFPRTYGGR---------AGWPRGGRNGPPTRRSDFRVLVSGLPPSGSWQD 120
Query: 126 LKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 183
LKDHMR AGDVC++ V +D GM G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 121 LKDHMREAGDVCYADVQKD--GM-GMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 176
>gi|410976794|ref|XP_003994798.1| PREDICTED: serine/arginine-rich splicing factor 9 [Felis catus]
Length = 340
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/179 (52%), Positives = 122/179 (68%), Gaps = 16/179 (8%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++EDLFYKYG I +I+LK +AF+ FED RDAEDAI GR+GY
Sbjct: 135 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 194
Query: 69 NFDGYRLRVEL--AHGGRRHSSSMDRYSSYSSGGSRGV-SRRSDYRVLVTGLPSSASWQD 125
++ RLRVE +G R + GG G +RRSD+RVLV+GLP S SWQD
Sbjct: 195 DYGQCRLRVEFPRTYGSR---------GGWPRGGRNGPPTRRSDFRVLVSGLPPSGSWQD 245
Query: 126 LKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 183
LKDHMR AGDVC++ V +D GM G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 246 LKDHMREAGDVCYADVQKD--GM-GMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 301
>gi|339244049|ref|XP_003377950.1| splicing factor, arginine/serine-rich 1 [Trichinella spiralis]
gi|316973185|gb|EFV56805.1| splicing factor, arginine/serine-rich 1 [Trichinella spiralis]
Length = 300
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/172 (47%), Positives = 113/172 (65%), Gaps = 6/172 (3%)
Query: 4 RSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIR 63
RS +YVGNLP D R R++E F ++G +V +DLK PP +AF+EFED RDAEDA+R
Sbjct: 7 RSDARIYVGNLPPDIRSRDIESCFERFGKVVAVDLKNRKGPP-FAFVEFEDARDAEDAVR 65
Query: 64 GRDGYNFDGYRLRVELAHGGRRHS--SSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSA 121
+DGY DGY+LRVE G H + +R + +G SR + +R ++GLP+S
Sbjct: 66 YKDGYELDGYKLRVEFPRGSGVHPGYNQRNRMLAGRNGCRTNASRHTGFRCYISGLPASG 125
Query: 122 SWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
SWQDLKDHMR AGDVCFS V+++ G+V+Y +D++YA+ L+ S FR
Sbjct: 126 SWQDLKDHMREAGDVCFSDVYKNG---NGVVEYMRAEDLEYALANLNESRFR 174
>gi|47086241|ref|NP_998064.1| splicing factor, arginine/serine-rich 9 [Danio rerio]
gi|45501375|gb|AAH67134.1| Zgc:77449 [Danio rerio]
Length = 244
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/179 (49%), Positives = 117/179 (65%), Gaps = 5/179 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D + R++EDLF+KYG I DI+LK +AF+ FED RDAEDA+ GR+GY
Sbjct: 6 IYVGNLPMDVQERDIEDLFFKYGKIRDIELKNNRSTIPFAFVRFEDPRDAEDAVFGRNGY 65
Query: 69 NFDGYRLRVELAH-GGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLK 127
F +LRVE G + S G +RRS++RV+VTGLP + SWQDLK
Sbjct: 66 GFGDCKLRVEYPRSSGSKFSGPAGGGGGGPRGRFGPPTRRSEFRVIVTGLPPTGSWQDLK 125
Query: 128 DHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 185
DHMR AGDVCF+ V RD G+V++ +DM+YA+R+LD +EFR + +Y+RV E
Sbjct: 126 DHMREAGDVCFADVQRD---GEGVVEFLRREDMEYALRRLDSTEFRSHQGETAYIRVME 181
>gi|302828648|ref|XP_002945891.1| hypothetical protein VOLCADRAFT_72532 [Volvox carteri f.
nagariensis]
gi|300268706|gb|EFJ52886.1| hypothetical protein VOLCADRAFT_72532 [Volvox carteri f.
nagariensis]
Length = 288
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 86/181 (47%), Positives = 118/181 (65%), Gaps = 7/181 (3%)
Query: 7 RTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRD 66
R ++VGNLP D R +E++++FYK+G I ID+K P RPPG+AF+EF+D R AE+A R R+
Sbjct: 10 RAIFVGNLPIDVREKELDEIFYKFGRIRMIDIKKPARPPGFAFIEFDDPRSAEEAARRRN 69
Query: 67 GYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDL 126
Y F G R+RVE+A GG S Y R + +R+ V GLP SASWQDL
Sbjct: 70 NYEFAGMRMRVEIARGGEGSGSQQPLRIGY-----RPIRNTLGFRLYVKGLPRSASWQDL 124
Query: 127 KDHMRRAGDVCFSQVFRD-RGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRS-YVRVR 184
KD +RR ++++F+D R + G+V++ S DDMK A+RKLD SEF N F + YVR+
Sbjct: 125 KDFVRRVCKPLYTEIFKDHRDNVLGVVEFESKDDMKAALRKLDDSEFTNPFDKGHYVRLV 184
Query: 185 E 185
E
Sbjct: 185 E 185
>gi|390336105|ref|XP_003724280.1| PREDICTED: serine/arginine-rich splicing factor 1-like
[Strongylocentrotus purpuratus]
Length = 299
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 90/191 (47%), Positives = 122/191 (63%), Gaps = 28/191 (14%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGY--------------AFLEFED 54
+YVGNLP D R +++ED+FYK+G + DIDLK RPP + AF+EF D
Sbjct: 18 IYVGNLPPDIREKDIEDMFYKFGSVADIDLK-NKRPPSFSSSGSERERFGTPFAFVEFYD 76
Query: 55 YRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLV 114
RDA+DA+ RDGYN+DGYR+RVE G + S R S YRV+V
Sbjct: 77 RRDADDAVLARDGYNYDGYRIRVEFPRGTKGFKGSRPRGPPPRR---------SSYRVIV 127
Query: 115 TGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR- 173
+GLPS+ SWQDLKDHMR AGDVC++ V+RD TG+V++ +DMKYA+++LD ++FR
Sbjct: 128 SGLPSTGSWQDLKDHMREAGDVCYADVYRDG---TGVVEFLRPEDMKYAVKQLDDTKFRS 184
Query: 174 NAFSRSYVRVR 184
+ SY+RV+
Sbjct: 185 HEGDVSYIRVK 195
>gi|74192738|dbj|BAE34886.1| unnamed protein product [Mus musculus]
Length = 222
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 95/179 (53%), Positives = 122/179 (68%), Gaps = 16/179 (8%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R R++EDLFYKYG I +I+LK +AF+ FED RDAEDAI GR+GY
Sbjct: 17 IYVGNLPSDVRERDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 76
Query: 69 NFDGYRLRVEL--AHGGRRHSSSMDRYSSYSSGGSRGV-SRRSDYRVLVTGLPSSASWQD 125
++ RLRVE +GGR + G G +RRSD+RVLV+GLP S SWQD
Sbjct: 77 DYGQCRLRVEFPRTYGGR---------GGWPRGARNGPPTRRSDFRVLVSGLPPSGSWQD 127
Query: 126 LKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 183
LKDHMR AGDVC++ V +D GM G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 128 LKDHMREAGDVCYADVQKD--GM-GMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 183
>gi|13385016|ref|NP_079849.1| serine/arginine-rich splicing factor 9 [Mus musculus]
gi|66774167|sp|Q9D0B0.1|SRSF9_MOUSE RecName: Full=Serine/arginine-rich splicing factor 9; AltName:
Full=Splicing factor, arginine/serine-rich 9
gi|12847866|dbj|BAB27740.1| unnamed protein product [Mus musculus]
gi|15126569|gb|AAH12217.1| Splicing factor, arginine/serine rich 9 [Mus musculus]
gi|148687919|gb|EDL19866.1| splicing factor, arginine/serine rich 9, isoform CRA_b [Mus
musculus]
Length = 222
Score = 160 bits (404), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 94/179 (52%), Positives = 122/179 (68%), Gaps = 16/179 (8%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++EDLFYKYG I +I+LK +AF+ FED RDAEDAI GR+GY
Sbjct: 17 IYVGNLPSDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 76
Query: 69 NFDGYRLRVEL--AHGGRRHSSSMDRYSSYSSGGSRGV-SRRSDYRVLVTGLPSSASWQD 125
++ RLRVE +GGR + G G +RRSD+RVLV+GLP S SWQD
Sbjct: 77 DYGQCRLRVEFPRTYGGR---------GGWPRGARNGPPTRRSDFRVLVSGLPPSGSWQD 127
Query: 126 LKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 183
LKDHMR AGDVC++ V +D GM G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 128 LKDHMREAGDVCYADVQKD--GM-GMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 183
>gi|355718943|gb|AES06437.1| splicing factor, arginine/serine-rich 9 [Mustela putorius furo]
Length = 220
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/179 (52%), Positives = 122/179 (68%), Gaps = 16/179 (8%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++EDLFYKYG I +I+LK +AF+ FED RDAEDAI GR+GY
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGYRLRVEL--AHGGRRHSSSMDRYSSYSSGGSRGV-SRRSDYRVLVTGLPSSASWQD 125
++ RLRVE +G R + GG G +RRSD+RVLV+GLP S SWQD
Sbjct: 76 DYGQCRLRVEFPRTYGSR---------GGWPRGGRNGPPTRRSDFRVLVSGLPPSGSWQD 126
Query: 126 LKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 183
LKDHMR AGDVC++ V +D GM G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 127 LKDHMREAGDVCYADVQKD--GM-GMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 182
>gi|57105666|ref|XP_534706.1| PREDICTED: serine/arginine-rich splicing factor 9 isoform 1 [Canis
lupus familiaris]
Length = 221
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/179 (52%), Positives = 122/179 (68%), Gaps = 16/179 (8%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++EDLFYKYG I +I+LK +AF+ FED RDAEDAI GR+GY
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGYRLRVEL--AHGGRRHSSSMDRYSSYSSGGSRGV-SRRSDYRVLVTGLPSSASWQD 125
++ RLRVE +G R + GG G +RRSD+RVLV+GLP S SWQD
Sbjct: 76 DYGQCRLRVEFPRTYGSR---------GGWPRGGRNGPPTRRSDFRVLVSGLPPSGSWQD 126
Query: 126 LKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 183
LKDHMR AGDVC++ V +D GM G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 127 LKDHMREAGDVCYADVQKD--GM-GMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 182
>gi|57164147|ref|NP_001009255.1| serine/arginine-rich splicing factor 9 [Rattus norvegicus]
gi|92058728|sp|Q5PPI1.1|SRSF9_RAT RecName: Full=Serine/arginine-rich splicing factor 9; AltName:
Full=Splicing factor, arginine/serine-rich 9
gi|56388745|gb|AAH87684.1| Splicing factor, arginine/serine rich 9 [Rattus norvegicus]
gi|149063569|gb|EDM13892.1| splicing factor, arginine/serine rich 9, isoform CRA_b [Rattus
norvegicus]
Length = 221
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/178 (52%), Positives = 121/178 (67%), Gaps = 14/178 (7%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++EDLFYKYG I +I+LK +AF+ FED RDAEDAI GR+GY
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGYRLRVEL--AHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDL 126
++ RLRVE A+GGR R +RRSD+RVLV+GLP S SWQDL
Sbjct: 76 DYGQCRLRVEFPRAYGGRGGWPRASRNGP--------PTRRSDFRVLVSGLPPSGSWQDL 127
Query: 127 KDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 183
KDHMR AGDVC++ V +D GM G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 128 KDHMREAGDVCYADVQKD--GM-GMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 182
>gi|428170004|gb|EKX38933.1| hypothetical protein GUITHDRAFT_39633, partial [Guillardia theta
CCMP2712]
Length = 171
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 89/179 (49%), Positives = 121/179 (67%), Gaps = 14/179 (7%)
Query: 11 VGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED----AIRGRD 66
VGNLP D R R+++DLFYKYG I DI++K P RPP +AF+EF++ DAED A+ D
Sbjct: 1 VGNLPLDIRERDIDDLFYKYGRIRDIEVKTPSRPPAFAFVEFDNLYDAEDAGMCALPCTD 60
Query: 67 GYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGS--RGVSRRSDYRVLVTGLPSSASWQ 124
G F+G RLRVE++ G +++ Y SG + R + RRSDYRV+++GLP SASWQ
Sbjct: 61 GVMFEGARLRVEMSRG----TAATYGYDKRGSGKAPPRNL-RRSDYRVIISGLPKSASWQ 115
Query: 125 DLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRV 183
DLKD R+AG++ ++ V R G GIV++ + DD YAI+K D +EF N F R Y+RV
Sbjct: 116 DLKDFFRQAGEIVYTDVDRQGG---GIVEFANEDDRDYAIKKFDDTEFSNPFDRGYIRV 171
>gi|405968123|gb|EKC33223.1| Splicing factor, arginine/serine-rich 1 [Crassostrea gigas]
Length = 232
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 92/195 (47%), Positives = 119/195 (61%), Gaps = 14/195 (7%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS + +YVGNLP D R R++EDLFYK+G I +DLK PP + F+EFED RDA D
Sbjct: 1 MSRGNDVRVYVGNLPPDIRARDIEDLFYKFGKIAFVDLKTRRGPP-FCFVEFEDPRDASD 59
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRS---------DYR 111
A+ RDGYN+DGY LRVE GG S +YR
Sbjct: 60 AVHERDGYNYDGYTLRVEFPRGGGPGGSRSRGGGGGYGFRGGRGPPGGRGGPPSRRSEYR 119
Query: 112 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSE 171
VLV+GLP S SWQDLKDHMR AGDVC++ V++D TG+V++ +DMK+A+ KLD ++
Sbjct: 120 VLVSGLPPSGSWQDLKDHMREAGDVCYTDVYKD---GTGVVEFLRKEDMKHAVSKLDDTK 176
Query: 172 FR-NAFSRSYVRVRE 185
FR + SY+RV+E
Sbjct: 177 FRSHEGEVSYIRVKE 191
>gi|159479816|ref|XP_001697982.1| SR protein factor [Chlamydomonas reinhardtii]
gi|158273781|gb|EDO99567.1| SR protein factor [Chlamydomonas reinhardtii]
Length = 320
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 82/180 (45%), Positives = 115/180 (63%), Gaps = 7/180 (3%)
Query: 8 TLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDG 67
++VGNLP D R +E++++FYK+G I ID+K P RPPG+AF+EFED R AE+A R R+
Sbjct: 36 AIFVGNLPYDVREKELDEIFYKFGRIRMIDIKKPARPPGFAFVEFEDPRSAEEAARRRNN 95
Query: 68 YNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLK 127
Y F G R+RVE+A GG + Y R + +R+ V LP SASWQDLK
Sbjct: 96 YEFAGMRMRVEIARGGEAAGAQQPLRIGY-----RPIRNTMGFRLYVKNLPRSASWQDLK 150
Query: 128 DHMRRAGDVCFSQVFRD-RGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRS-YVRVRE 185
D +RR +++VF+D R + G+V++ S +DMK +RKLD +EF N F + YVR+ E
Sbjct: 151 DFVRRVCKPLYTEVFKDNRDNVVGVVEFESKEDMKATVRKLDDTEFANPFDKGHYVRLTE 210
>gi|149053805|gb|EDM05622.1| rCG34610, isoform CRA_a [Rattus norvegicus]
Length = 214
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 110/177 (62%), Gaps = 36/177 (20%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
++DGYRLRVE GR LP S SWQDLKD
Sbjct: 78 DYDGYRLRVEFPRSGR--------------------------------LPPSGSWQDLKD 105
Query: 129 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 184
HMR AGDVC++ V+RD TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 106 HMREAGDVCYADVYRD---GTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 159
>gi|159155810|gb|AAI54584.1| Zgc:77449 protein [Danio rerio]
Length = 246
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 88/181 (48%), Positives = 118/181 (65%), Gaps = 7/181 (3%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D + R++EDLF+KYG I DI+LK +AF+ FED RDAEDA+ GR+GY
Sbjct: 6 IYVGNLPMDVQERDIEDLFFKYGKIRDIELKNNRSTIPFAFVRFEDPRDAEDAVFGRNGY 65
Query: 69 NFDGYRLRVELAH-GGRRHS--SSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQD 125
F +LRVE G + S + G +RRS++RV+VTGLP + SWQD
Sbjct: 66 GFGDCKLRVEYPRSSGSKFSGPAGGGGGGGGPRGRFGPPTRRSEFRVIVTGLPPTGSWQD 125
Query: 126 LKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 184
LKDHMR AGDVCF+ V RD G+V++ +DM+YA+R+LD +EFR + +Y+RV
Sbjct: 126 LKDHMREAGDVCFADVQRD---GEGVVEFLRREDMEYALRRLDSTEFRSHQGETAYIRVM 182
Query: 185 E 185
E
Sbjct: 183 E 183
>gi|340371197|ref|XP_003384132.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Amphimedon
queenslandica]
Length = 242
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/184 (50%), Positives = 122/184 (66%), Gaps = 11/184 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLPGD R R++ED+FYKYG +VD+DL P +AF+EFED RDA+DAIRGRDGY
Sbjct: 11 VYVGNLPGDIRKRDLEDIFYKYGKLVDVDLHDRRETP-FAFIEFEDPRDADDAIRGRDGY 69
Query: 69 NFDGYRLRVEL------AHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSAS 122
FDGY+LRVEL GGR G RG R+S +++++TGLP + S
Sbjct: 70 MFDGYKLRVELPRSSPRYVGGRGGGGRGYYGGGRRDGYGRGGGRQSGHKLMITGLPPTGS 129
Query: 123 WQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRS-YV 181
WQD+KDH R+AGDV ++ V RD TG+V++ Y+ K A+R LD S+FR+ S Y+
Sbjct: 130 WQDIKDHFRQAGDVIYANVERD---GTGVVEFARYEHAKRAVRDLDDSKFRSHEGESAYI 186
Query: 182 RVRE 185
RV E
Sbjct: 187 RVSE 190
>gi|395833916|ref|XP_003789963.1| PREDICTED: serine/arginine-rich splicing factor 9 isoform 1
[Otolemur garnettii]
gi|395833918|ref|XP_003789964.1| PREDICTED: serine/arginine-rich splicing factor 9 isoform 2
[Otolemur garnettii]
Length = 221
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/176 (51%), Positives = 119/176 (67%), Gaps = 10/176 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++EDLFYKYG I +I+LK +AF+ FED RDAEDAI GR+GY
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
++ RLRVE R + +G +RRSD+RVLV+GLP S SWQDLKD
Sbjct: 76 DYGQCRLRVEFP---RTYGGQGGWPRGGRNGPP---TRRSDFRVLVSGLPPSGSWQDLKD 129
Query: 129 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 183
HMR AGDVC++ V +D GM G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 130 HMREAGDVCYADVQKD--GM-GMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 182
>gi|296490264|tpg|DAA32377.1| TPA: splicing factor, arginine/serine-rich 9-like [Bos taurus]
Length = 221
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/176 (51%), Positives = 119/176 (67%), Gaps = 10/176 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++EDLFYKYG I +I+LK +AF+ FED RDAEDA+ GR+GY
Sbjct: 16 IYVGNLPNDVREKDLEDLFYKYGHISEIELKNRHGLVPFAFVRFEDPRDAEDAVYGRNGY 75
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
++ RLRVE + R G S +RRSD+RVLV+GLP S SWQDLKD
Sbjct: 76 DYGQCRLRVEFPR------TYGGRGGWPRGGRSGPPTRRSDFRVLVSGLPPSGSWQDLKD 129
Query: 129 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 183
HMR AGDVC++ V +D GM G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 130 HMREAGDVCYADVQKD--GM-GMVEYLRKEDMEYALRKLDETKFRSHEGETSYIRV 182
>gi|426247382|ref|XP_004017465.1| PREDICTED: serine/arginine-rich splicing factor 9 isoform 1 [Ovis
aries]
Length = 226
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/176 (52%), Positives = 119/176 (67%), Gaps = 10/176 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++EDLFYKYG I +I+LK +AF+ FED RDAEDAI GR+GY
Sbjct: 16 IYVGNLPSDVREKDLEDLFYKYGRISEIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
++ RLRVE + R G S +RRSD+RVLV+GLP S SWQDLKD
Sbjct: 76 DYGQCRLRVEFPR------TYGGRGGWPRGGRSGPPTRRSDFRVLVSGLPPSGSWQDLKD 129
Query: 129 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 183
HMR AGDVC++ V +D GM G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 130 HMREAGDVCYADVQKD--GM-GMVEYLRKEDMEYALRKLDETKFRSHEGETSYIRV 182
>gi|134085783|ref|NP_001076867.1| serine/arginine-rich splicing factor 9 [Bos taurus]
gi|358421698|ref|XP_003585083.1| PREDICTED: serine/arginine-rich splicing factor 9-like [Bos taurus]
gi|133777441|gb|AAI14700.1| SFRS9 protein [Bos taurus]
gi|296478484|tpg|DAA20599.1| TPA: splicing factor, arginine/serine-rich 9 [Bos taurus]
Length = 221
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/176 (52%), Positives = 119/176 (67%), Gaps = 10/176 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++EDLFYKYG I +I+LK +AF+ FED RDAEDAI GR+GY
Sbjct: 16 IYVGNLPSDVREKDLEDLFYKYGRISEIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
++ RLRVE + R G S +RRSD+RVLV+GLP S SWQDLKD
Sbjct: 76 DYGQCRLRVEFPR------TYGGRGGWPRGGRSGPPTRRSDFRVLVSGLPPSGSWQDLKD 129
Query: 129 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 183
HMR AGDVC++ V +D GM G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 130 HMREAGDVCYADVQKD--GM-GMVEYLRKEDMEYALRKLDETKFRSHEGETSYIRV 182
>gi|444723179|gb|ELW63840.1| Serine/arginine-rich splicing factor 9 [Tupaia chinensis]
Length = 235
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/176 (51%), Positives = 119/176 (67%), Gaps = 10/176 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++EDLFYKYG I +I+LK +AF+ FED RDAEDAI GR+GY
Sbjct: 30 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNQHGLVPFAFVRFEDPRDAEDAIYGRNGY 89
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
++ RLRVE + R G + +RRSD+RVLV+GLP S SWQDLKD
Sbjct: 90 DYGQCRLRVEFPR------TYGGRGGWPRGGRNGPPTRRSDFRVLVSGLPPSGSWQDLKD 143
Query: 129 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 183
HMR AGDVC++ V +D GM G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 144 HMREAGDVCYADVQKD--GM-GMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 196
>gi|291407986|ref|XP_002720309.1| PREDICTED: splicing factor, arginine/serine-rich 1 [Oryctolagus
cuniculus]
Length = 343
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/189 (48%), Positives = 123/189 (65%), Gaps = 22/189 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D REV+D+FYKYG + D+DLK +AF+EF RDA +A+ GRDGY
Sbjct: 17 IYVGNLPPDIGTREVKDMFYKYGTVRDVDLKNRRWGRPFAFVEFNSPRDAHNAVHGRDGY 76
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV-------SRRSDYRVLVTGLPSSA 121
+++GYRLRVE R + Y GG RG+ SRRSD RVLV+GLP S
Sbjct: 77 DYEGYRLRVEFPRNYR---------AIY--GGGRGLLETRGTSSRRSDNRVLVSGLPPSG 125
Query: 122 SWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSY 180
SWQDLKDHMR AG VC++ V RD +G+V++ +DM YA+RKL+ ++FR + +Y
Sbjct: 126 SWQDLKDHMREAGYVCYAAVRRD---GSGVVEFVWKEDMSYAVRKLNNTKFRSHKGETAY 182
Query: 181 VRVREYDSR 189
+RVR ++R
Sbjct: 183 IRVRIDEAR 191
>gi|213515460|ref|NP_001133886.1| Splicing factor, arginine/serine-rich 9 [Salmo salar]
gi|209155694|gb|ACI34079.1| Splicing factor, arginine/serine-rich 9 [Salmo salar]
gi|223649152|gb|ACN11334.1| Splicing factor, arginine/serine-rich 9 [Salmo salar]
Length = 252
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/268 (42%), Positives = 146/268 (54%), Gaps = 35/268 (13%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLK-----IPPRPPGYAFLEFEDYRDAEDAIR 63
+YVGNLP D + R++EDLF+KYG I DI+LK IP +AF+ FED RDAEDA+
Sbjct: 6 IYVGNLPMDVQERDIEDLFFKYGKIRDIELKNNRGTIP-----FAFVRFEDPRDAEDAVY 60
Query: 64 GRDGYNFDGYRLRVELAH-GGRRHSSSMDRYSSYSSGGSRGV----SRRSDYRVLVTGLP 118
GR+GY +LRVE G + S M GG +G +RRS++RV+VTGLP
Sbjct: 61 GRNGYGLGDSKLRVEYPRSSGAKFSGPMGGGERGEGGGPKGRFGPPTRRSEFRVIVTGLP 120
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFS 177
S SWQDLKDHMR AGDVCF+ V RD G+V++ +DM+YA+R+LDR+EFR +
Sbjct: 121 PSGSWQDLKDHMREAGDVCFADVQRD---GEGVVEFVRREDMEYALRRLDRTEFRSHQGE 177
Query: 178 RSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYSPRGKY 237
+ +RV R S PY SR P R S PR
Sbjct: 178 MANIRVHGEHGASYGRSQSRSRSPRGRGYSPPPYKSRGSPPQRYQS--------PPRRHV 229
Query: 238 SRRSPSLSPAR--SASQRSPSGSPPRSF 263
SR SP PAR + SP PPR +
Sbjct: 230 SRHSP---PARRHPVTHHSP---PPRHY 251
>gi|268561908|ref|XP_002646556.1| Hypothetical protein CBG20414 [Caenorhabditis briggsae]
Length = 308
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/184 (42%), Positives = 113/184 (61%), Gaps = 15/184 (8%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS +S T+++GNLPGD R +E++ LF KYG I +D+K + F++F D RDA+D
Sbjct: 1 MSRDASDTIFIGNLPGDVREKELDSLFSKYGRINKVDVKSGRGGAAFGFVQFSDSRDADD 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMD------------RYSSYSSGGSRGVSRRS 108
A+RGRDGY+FDG R+RVEL G R Y S G RRS
Sbjct: 61 AVRGRDGYDFDGKRIRVELTRGSGPRGPGGRPVRDGYDRGYDRRDDGYGRRQSHGPPRRS 120
Query: 109 DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLD 168
+ R ++ GLP + SWQD+KDH++ AGD+C++ V R+ GIV++ ++DMKYAI+K D
Sbjct: 121 ENRAIIEGLPPTGSWQDIKDHLKSAGDICYADVGRN---GDGIVEFEKHEDMKYAIKKFD 177
Query: 169 RSEF 172
++F
Sbjct: 178 DTKF 181
>gi|307078155|ref|NP_001182495.1| splicing factor, arginine/serine-rich 9 [Sus scrofa]
Length = 221
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 91/176 (51%), Positives = 119/176 (67%), Gaps = 10/176 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++EDLFYKYG I +I+LK +AF+ FED RDAEDAI GR+GY
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
++ RLRVE + R G + +RRSD+RVLV+GLP S SWQDLKD
Sbjct: 76 DYGQCRLRVEFPR------TYGGRGGWPRGGRNGPPTRRSDFRVLVSGLPPSGSWQDLKD 129
Query: 129 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 183
HMR AGDVC++ V +D GM G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 130 HMREAGDVCYADVQKD--GM-GMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 182
>gi|327282648|ref|XP_003226054.1| PREDICTED: serine/arginine-rich splicing factor 9-like [Anolis
carolinensis]
Length = 245
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 88/176 (50%), Positives = 120/176 (68%), Gaps = 8/176 (4%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP + R +++E+LFYKYG I DI+LK +AF+ FED RDAEDA+ GR+GY
Sbjct: 38 IYVGNLPANVREKDLEELFYKYGRIRDIELKSKRGLVPFAFVRFEDPRDAEDAVYGRNGY 97
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
++ RLRVE + S + G + SRRS++RVLV+GLP S SWQDLKD
Sbjct: 98 DYGQCRLRVEFP----KPSRGRGGFGGGPRGRNGPPSRRSEFRVLVSGLPPSGSWQDLKD 153
Query: 129 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 183
HMR AGDVC++ V +D GM G+V++ +DM+YA+RKLD ++FR + SY+RV
Sbjct: 154 HMREAGDVCYADVQKD--GM-GVVEFLRKEDMEYALRKLDDTKFRSHEGETSYIRV 206
>gi|387219571|gb|AFJ69494.1| splicing factor, arginine/serine-rich 1/9 [Nannochloropsis gaditana
CCMP526]
Length = 277
Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 87/176 (49%), Positives = 113/176 (64%), Gaps = 12/176 (6%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R R+++DLFYKYG I ID+K P RPP YAF+ FED RDA+DA+ RD Y
Sbjct: 5 IYVGNLPMDVRERDLDDLFYKYGRIRGIDIKRPSRPPAYAFVAFEDPRDAKDAVHYRDNY 64
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
+FDG R+RVELA+ R R GG R R+D+R+ V+ LP SWQDLKD
Sbjct: 65 DFDGGRIRVELANETPR------RRDDRGFGGGRN---RTDFRLEVSDLPDRTSWQDLKD 115
Query: 129 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVR 184
+ + GDV ++ V R+ G+V++ + +DM A RKLD S FRN F +RVR
Sbjct: 116 YFKPVGDVLYADVSRN---GEGVVEFATKEDMFAAKRKLDGSTFRNPFDSREIRVR 168
>gi|384950066|gb|AFI38638.1| serine/arginine-rich splicing factor 9 [Macaca mulatta]
Length = 221
Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 90/176 (51%), Positives = 117/176 (66%), Gaps = 10/176 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++EDLFYKYG I +I+LK +AF+ FED RDAEDAI GR+GY
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKTRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
++ RLRVE + R G + +RRSD+RVLV+GLP S SWQDLKD
Sbjct: 76 DYGQCRLRVEFPR------TYGGRGGWPRGGRNGPPTRRSDFRVLVSGLPPSGSWQDLKD 129
Query: 129 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 183
HMR AGDVC++ V +D GM V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 130 HMREAGDVCYADVQKDGVGM---VEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 182
>gi|348585449|ref|XP_003478484.1| PREDICTED: serine/arginine-rich splicing factor 9-like [Cavia
porcellus]
gi|351702214|gb|EHB05133.1| Splicing factor, arginine/serine-rich 9 [Heterocephalus glaber]
Length = 221
Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 91/176 (51%), Positives = 119/176 (67%), Gaps = 10/176 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++EDLFYKYG I +I+LK +AF+ FED RDAEDAI GR+GY
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
++ RLRVE + R G + +RRSD+RVLV+GLP S SWQDLKD
Sbjct: 76 DYGQCRLRVEFPR------TYGGRGGWPRGGRTGPPTRRSDFRVLVSGLPPSGSWQDLKD 129
Query: 129 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 183
HMR AGDVC++ V +D GM G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 130 HMREAGDVCYADVQKD--GM-GMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 182
>gi|417397369|gb|JAA45718.1| Putative splicing factor arginine/serine-rich 9-like protein
[Desmodus rotundus]
gi|431914272|gb|ELK15530.1| Splicing factor, arginine/serine-rich 9 [Pteropus alecto]
Length = 221
Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 91/176 (51%), Positives = 119/176 (67%), Gaps = 10/176 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++EDLFYKYG I +I+LK +AF+ FED RDAEDAI GR+GY
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
++ RLRVE + R G + +RRSD+RVLV+GLP S SWQDLKD
Sbjct: 76 DYGQCRLRVEFPR------TYGGRGGWPRGGRNGPPTRRSDFRVLVSGLPPSGSWQDLKD 129
Query: 129 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 183
HMR AGDVC++ V +D GM G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 130 HMREAGDVCYADVQKD--GM-GMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 182
>gi|4506903|ref|NP_003760.1| serine/arginine-rich splicing factor 9 [Homo sapiens]
gi|114647286|ref|XP_001160785.1| PREDICTED: serine/arginine-rich splicing factor 9 isoform 2 [Pan
troglodytes]
gi|297693182|ref|XP_002823915.1| PREDICTED: serine/arginine-rich splicing factor 9 [Pongo abelii]
gi|332262536|ref|XP_003280317.1| PREDICTED: serine/arginine-rich splicing factor 9 [Nomascus
leucogenys]
gi|402887863|ref|XP_003907300.1| PREDICTED: serine/arginine-rich splicing factor 9 [Papio anubis]
gi|410047369|ref|XP_003952371.1| PREDICTED: serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|3929377|sp|Q13242.1|SRSF9_HUMAN RecName: Full=Serine/arginine-rich splicing factor 9; AltName:
Full=Pre-mRNA-splicing factor SRp30C; AltName:
Full=Splicing factor, arginine/serine-rich 9
gi|1049078|gb|AAA93069.1| SRp30c [Homo sapiens]
gi|4099429|gb|AAD00626.1| splicing factor SRp30c [Homo sapiens]
gi|62739648|gb|AAH93973.1| Splicing factor, arginine/serine-rich 9 [Homo sapiens]
gi|62740064|gb|AAH93971.1| Splicing factor, arginine/serine-rich 9 [Homo sapiens]
gi|119618600|gb|EAW98194.1| splicing factor, arginine/serine-rich 9 [Homo sapiens]
gi|261861074|dbj|BAI47059.1| splicing factor, arginine/serine-rich 9 [synthetic construct]
gi|380817540|gb|AFE80644.1| serine/arginine-rich splicing factor 9 [Macaca mulatta]
gi|383422449|gb|AFH34438.1| serine/arginine-rich splicing factor 9 [Macaca mulatta]
gi|410227624|gb|JAA11031.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410227626|gb|JAA11032.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410227628|gb|JAA11033.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410263740|gb|JAA19836.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410263742|gb|JAA19837.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410263744|gb|JAA19838.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410305344|gb|JAA31272.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410305346|gb|JAA31273.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410305348|gb|JAA31274.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410340983|gb|JAA39438.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410340985|gb|JAA39439.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
Length = 221
Score = 153 bits (386), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 90/176 (51%), Positives = 117/176 (66%), Gaps = 10/176 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++EDLFYKYG I +I+LK +AF+ FED RDAEDAI GR+GY
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
++ RLRVE + R G + +RRSD+RVLV+GLP S SWQDLKD
Sbjct: 76 DYGQCRLRVEFPR------TYGGRGGWPRGGRNGPPTRRSDFRVLVSGLPPSGSWQDLKD 129
Query: 129 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 183
HMR AGDVC++ V +D GM V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 130 HMREAGDVCYADVQKDGVGM---VEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 182
>gi|426247384|ref|XP_004017466.1| PREDICTED: serine/arginine-rich splicing factor 9 isoform 2 [Ovis
aries]
Length = 200
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/165 (53%), Positives = 113/165 (68%), Gaps = 9/165 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++EDLFYKYG I +I+LK +AF+ FED RDAEDAI GR+GY
Sbjct: 16 IYVGNLPSDVREKDLEDLFYKYGRISEIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
++ RLRVE + R G S +RRSD+RVLV+GLP S SWQDLKD
Sbjct: 76 DYGQCRLRVEFPR------TYGGRGGWPRGGRSGPPTRRSDFRVLVSGLPPSGSWQDLKD 129
Query: 129 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
HMR AGDVC++ V +D GM G+V+Y +DM+YA+RKLD ++FR
Sbjct: 130 HMREAGDVCYADVQKD--GM-GMVEYLRKEDMEYALRKLDETKFR 171
>gi|148669918|gb|EDL01865.1| splicing factor, arginine/serine-rich 1 (ASF/SF2), isoform CRA_c
[Mus musculus]
Length = 212
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 110/177 (62%), Gaps = 38/177 (21%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
++DGYRLRVE RR LP S SWQDLKD
Sbjct: 78 DYDGYRLRVEF-------------------------PRR---------LPPSGSWQDLKD 103
Query: 129 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 184
HMR AGDVC++ V+RD TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 104 HMREAGDVCYADVYRD---GTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 157
>gi|268563921|ref|XP_002647045.1| C. briggsae CBR-RSP-3 protein [Caenorhabditis briggsae]
Length = 234
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/187 (47%), Positives = 115/187 (61%), Gaps = 26/187 (13%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
+ +YVGNLP D R +EVED+F+KYG I ID+K R P +AF+EFED RDAEDA+R
Sbjct: 6 EDQKVYVGNLPADVRDKEVEDIFHKYGRIKYIDVK-SGRGPAFAFIEFEDNRDAEDAVRA 64
Query: 65 RDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVT-----GLPS 119
RDGY FDG R+RVE G G RG +S + + T +
Sbjct: 65 RDGYEFDGRRIRVEFTRG----------------VGPRGPVAQSTRKEVATVEAVTIVED 108
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSR 178
+DLKDHMR AGDVC++ V RD TG+V++T YDD+KYAIRKLD ++FR +
Sbjct: 109 VVVVKDLKDHMREAGDVCYADVARD---GTGVVEFTRYDDVKYAIRKLDDTKFRSHEGET 165
Query: 179 SYVRVRE 185
+Y+RVRE
Sbjct: 166 AYIRVRE 172
>gi|334327169|ref|XP_003340840.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 9-like [Monodelphis domestica]
Length = 220
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/227 (44%), Positives = 131/227 (57%), Gaps = 26/227 (11%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
S + +YV NLP D R +++EDLFYKYG I DI+LK +AF+ FED RDAED
Sbjct: 10 QSHDNDERIYVENLPADVREKDLEDLFYKYGRIRDIELKNRRGLAPFAFVRFEDPRDAED 69
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI GR+GY++ RLRVEL SRRS++RVLV+GLP S
Sbjct: 70 AIYGRNGYDYGQCRLRVELPRNPGGGGPRGRTGPP---------SRRSEFRVLVSGLPPS 120
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRS 179
SWQDLKDHMR AG VC++ V +D GM G+V++ +DM+YA+R+LD S+FR + S
Sbjct: 121 GSWQDLKDHMREAGGVCYADVQKD--GM-GVVEFLRKEDMEYALRRLDDSKFRSHEGETS 177
Query: 180 YVRVREYDSRRSYSRSPSR--------SPYYSRSRSRSPYYSRSRSP 218
Y+RV Y R + SPY SR SPYY+ +P
Sbjct: 178 YIRV--YPERSTSYGYSRSRSGSRGRDSPYQSRG---SPYYTSPYAP 219
>gi|158254720|dbj|BAF83333.1| unnamed protein product [Homo sapiens]
Length = 221
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/176 (50%), Positives = 116/176 (65%), Gaps = 10/176 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++EDLFYKYG I +I+LK +AF+ FED RDAEDAI GR+GY
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
++ RLRVE + R G + +RRSD+RVLV+GLP S SWQDLKD
Sbjct: 76 DYGQCRLRVEFPR------TYGGRGGWPRGGRNGPPTRRSDFRVLVSGLPPSGSWQDLKD 129
Query: 129 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 183
HMR AGD C++ V +D GM V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 130 HMREAGDACYADVQKDGVGM---VEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 182
>gi|348532825|ref|XP_003453906.1| PREDICTED: serine/arginine-rich splicing factor 9-like [Oreochromis
niloticus]
Length = 241
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/213 (44%), Positives = 126/213 (59%), Gaps = 10/213 (4%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D + R++EDLFYKYG I +I+LK +AF+ FED RDA+DA+ GR+GY
Sbjct: 6 IYVGNLPMDVQERDIEDLFYKYGKIREIELKNNRGTIPFAFVRFEDPRDADDAVYGRNGY 65
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
+ +LRVE R M G +RRS++RV+V+GLP S SWQDLKD
Sbjct: 66 GYGDSKLRVEYP---RSKPGPMGGGGGAPRGRFGPPTRRSEFRVIVSGLPPSGSWQDLKD 122
Query: 129 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVREYD 187
HMR AGDVCF+ V RD G+V++ +DM+YA+R+LD +EFR + +Y+RV E
Sbjct: 123 HMREAGDVCFADVQRD---GEGVVEFLRREDMEYALRRLDGTEFRSHQGETAYIRVYE-- 177
Query: 188 SRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSR 220
R SPYY+R P+R
Sbjct: 178 -ERGTPNWDRSRSRSRSRGRYSPYYNRRSPPAR 209
>gi|397525476|ref|XP_003832692.1| PREDICTED: serine/arginine-rich splicing factor 9 [Pan paniscus]
Length = 274
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 88/173 (50%), Positives = 114/173 (65%), Gaps = 10/173 (5%)
Query: 12 GNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFD 71
GNLP D R +++EDLFYKYG I +I+LK +AF+ FED RDAEDAI GR+GY++
Sbjct: 72 GNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGYDYG 131
Query: 72 GYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMR 131
RLRVE + R G + +RRSD+RVLV+GLP S SWQDLKDHMR
Sbjct: 132 QCRLRVEFPR------TYGGRGGWPRGGRNGPPTRRSDFRVLVSGLPPSGSWQDLKDHMR 185
Query: 132 RAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 183
AGDVC++ V +D GM V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 186 EAGDVCYADVQKDGVGM---VEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 235
>gi|52345494|ref|NP_001004795.1| serine/arginine-rich splicing factor 9 [Xenopus (Silurana)
tropicalis]
gi|49257722|gb|AAH74531.1| splicing factor, arginine/serine-rich 9 [Xenopus (Silurana)
tropicalis]
gi|89272901|emb|CAJ83204.1| splicing factor, arginine/serine-rich 9 [Xenopus (Silurana)
tropicalis]
Length = 225
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 116/182 (63%), Gaps = 18/182 (9%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLK------IPPRPPGYAFLEFEDYRDAEDAI 62
+YVGNLP D R +E+EDLF +YG I I+LK P +AF+ F+D RDAEDA+
Sbjct: 18 IYVGNLPADIREKELEDLFDRYGRIRTIELKNRGGSSAAP----FAFISFQDPRDAEDAV 73
Query: 63 RGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSAS 122
R+GY F RLRVE R S G + SRRS+YRV+V+GLP S S
Sbjct: 74 FARNGYEFGSCRLRVEFP----RSFRGSGGGYGGSRGRNGPPSRRSEYRVIVSGLPPSGS 129
Query: 123 WQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYV 181
WQDLKDHMR AGDVC++ V +D GM GIV++ +DM+YA+RKLD ++FR + SY+
Sbjct: 130 WQDLKDHMREAGDVCYADVHKD--GM-GIVEFIRKEDMEYALRKLDDTKFRSHEGETSYI 186
Query: 182 RV 183
RV
Sbjct: 187 RV 188
>gi|326433655|gb|EGD79225.1| splicing factor [Salpingoeca sp. ATCC 50818]
Length = 255
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/178 (47%), Positives = 115/178 (64%), Gaps = 21/178 (11%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
S R +YVGNLP D R RE++DLFYK+G I +I +K P YAF+ FED RDAEDA+R
Sbjct: 2 SRRRIYVGNLPYDIREREIDDLFYKFGRIEEITIKGP-----YAFVSFEDSRDAEDAVRR 56
Query: 65 RDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVS-RRSDYRVLVTGLPSSASW 123
RDGY F G RLRVE A+GGRR G+R + + S++R+ V+ LP +ASW
Sbjct: 57 RDGYEFGGGRLRVEFANGGRRER------------GARAFNGQHSEFRLRVSNLPRTASW 104
Query: 124 QDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYV 181
QD+KD R AG+V F++VF D TG+V++ DDM++A+R L+ + R+ S +
Sbjct: 105 QDVKDFCREAGEVLFAEVFHD---GTGLVEFRREDDMEWALRNLNERKLRSHLGDSDI 159
>gi|148228289|ref|NP_001088400.1| serine/arginine-rich splicing factor 9 [Xenopus laevis]
gi|54261635|gb|AAH84289.1| LOC495254 protein [Xenopus laevis]
Length = 230
Score = 146 bits (369), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 88/179 (49%), Positives = 116/179 (64%), Gaps = 7/179 (3%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPG-YAFLEFEDYRDAEDAIRGRDG 67
+YVGNLP D R +E+EDLF +YG I ++LK +AF+ ++D RDAEDA+ GR+G
Sbjct: 18 IYVGNLPSDIREKELEDLFDRYGRIRTVELKNRGGSSAPFAFISYQDPRDAEDAVFGRNG 77
Query: 68 YNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQD 125
Y+F RLRVE R Y R SRRS+YRV+V+GLP S SWQD
Sbjct: 78 YDFGSCRLRVEFPRSFRGSGGGGGGGGGYGGSRGRNGPPSRRSEYRVIVSGLPPSGSWQD 137
Query: 126 LKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 183
LKDHMR AGDVC++ V +D GM GIV++ +DM+YA+RKLD ++FR + SY+RV
Sbjct: 138 LKDHMREAGDVCYADVHKD--GM-GIVEFIRKEDMEYALRKLDDTKFRSHEGETSYIRV 193
>gi|297693630|ref|XP_002824116.1| PREDICTED: serine/arginine-rich splicing factor 9-like [Pongo
abelii]
Length = 221
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 114/177 (64%), Gaps = 10/177 (5%)
Query: 8 TLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDG 67
+YVGNLP D R +++EDLFYKYG I +++LK +AF+ ED RDAEDAI GR+G
Sbjct: 15 CIYVGNLPTDVREKDLEDLFYKYGRIREMELKNRHGLVPFAFVRLEDPRDAEDAIYGRNG 74
Query: 68 YNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLK 127
Y++ RLRVE + R G + +RRSD+RVLV+GLP S SWQDLK
Sbjct: 75 YDYGQCRLRVEFPR------TYGGRGGWPRGGRNGPPTRRSDFRVLVSGLPPSGSWQDLK 128
Query: 128 DHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 183
DHMR AGDVC++ V +D GM V+Y +DM+YA+RKL ++F + SY+RV
Sbjct: 129 DHMREAGDVCYADVRKDGVGM---VEYLRKEDMEYALRKLHDTKFHSHEGETSYIRV 182
>gi|428673079|gb|EKX73992.1| pre-mRNA splicing factor, putative [Babesia equi]
Length = 325
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/208 (44%), Positives = 122/208 (58%), Gaps = 10/208 (4%)
Query: 2 SSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRP--PGYAFLEFEDYRDAE 59
++RS ++VGNLP R++ ++F KYG I DID+K YAF+EFE R AE
Sbjct: 8 ANRSPSCVFVGNLPEKVDDRDIHEIFDKYGEIRDIDIKHGKTSNYTSYAFIEFESVRSAE 67
Query: 60 DAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLP 118
DA+ RDGY FD YRLRVE A G + S R SSY GSR R+DYR++++ LP
Sbjct: 68 DAVECRDGYEFDRYRLRVEFA--GEKKSRRHPR-SSYEDRGSRYPPPTRTDYRLVISNLP 124
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSR 178
WQ LKDHMR+AG V + + RG VD+ DMKYA+RKLD +E +
Sbjct: 125 HGCRWQHLKDHMRKAGPVGYVNIQHGRG----YVDFMHKSDMKYALRKLDGTELSTSEDS 180
Query: 179 SYVRVREYDSRRSYSRSPSRSPYYSRSR 206
+ +R+++ D RRS SR R +SR R
Sbjct: 181 ARIRIKKDDYRRSRSRDAYRRRSHSRGR 208
>gi|399218146|emb|CCF75033.1| unnamed protein product [Babesia microti strain RI]
Length = 230
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/199 (44%), Positives = 124/199 (62%), Gaps = 22/199 (11%)
Query: 8 TLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRP--PGYAFLEFEDYRDAEDAIRGR 65
++VGNLP D +RE+E++F K+G I DID+K YAF+EF RDAEDA+ R
Sbjct: 15 CIFVGNLPEDITVREIENIFGKFGEIRDIDIKKGKTSNYTAYAFIEFYHMRDAEDAVESR 74
Query: 66 DGYNFDGYRLRVELAHGGRRHSSS----MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSA 121
DGYNFD YRLRVE + GR+ S + + RY+ YS+ R+++R++++ + SS
Sbjct: 75 DGYNFDKYRLRVEFS--GRKRSGNQGDKLRRYNDYSN-------TRTEHRLVISNISSSC 125
Query: 122 SWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSY- 180
WQD+KDHM+RAG V + RG V+Y + DMKYA+ K D SE ++A RSY
Sbjct: 126 RWQDIKDHMKRAGPVGHVCIKDGRG----YVEYINKSDMKYALEKYDGSELQSA-GRSYR 180
Query: 181 VRVREYDSRRSYSRSPSRS 199
++VR D RS+S S RS
Sbjct: 181 IKVR-MDDHRSHSHSNERS 198
>gi|221130501|ref|XP_002159641.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Hydra
magnipapillata]
Length = 265
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/191 (42%), Positives = 119/191 (62%), Gaps = 12/191 (6%)
Query: 2 SSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDA 61
S+ S +YVGNLP + R++EDLF KYGPI ID+ P +AFLEFED RDA DA
Sbjct: 7 STSSECRVYVGNLPQFVKNRDIEDLFDKYGPIKAIDIH-NRFDPAFAFLEFEDPRDASDA 65
Query: 62 IRGRDGYNFDGYRLRVEL---AHGGRRHSSSMDRYSSYSSGGSRGVS----RRSDYRVLV 114
+ G+DG F+G R+RV+ + GR + S + RRS+ RVLV
Sbjct: 66 VYGKDGERFEGQRIRVQFPRNSAAGRERTESGSNNNGGGGYVRGRGRGPPIRRSENRVLV 125
Query: 115 TGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR- 173
+GLP + SWQDLKDHMR AG+V ++ V++D T + ++ +Y+DMK+A++ LD S+F+
Sbjct: 126 SGLPPTGSWQDLKDHMREAGEVLYADVYKDG---TAVCEFANYEDMKWAVKYLDDSKFKS 182
Query: 174 NAFSRSYVRVR 184
+ ++VRV+
Sbjct: 183 HENETTFVRVK 193
>gi|449522400|ref|XP_004168214.1| PREDICTED: pre-mRNA-splicing factor SF2-like, partial [Cucumis
sativus]
Length = 106
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 74/96 (77%), Positives = 80/96 (83%), Gaps = 1/96 (1%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MSSR SRT+YVGNLP D + E+EDLFYKYG I+DI+LKIPPRPP Y F+EFE RDAED
Sbjct: 1 MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAED 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSY 96
AIR RDGYNFDG RLRVELAHGGR SSS DR SSY
Sbjct: 61 AIRARDGYNFDGCRLRVELAHGGRGPSSS-DRRSSY 95
>gi|384950064|gb|AFI38637.1| serine/arginine-rich splicing factor 9 [Macaca mulatta]
Length = 216
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/176 (49%), Positives = 114/176 (64%), Gaps = 15/176 (8%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++EDLFYKYG I +I+LK +AF+ FED RDAEDAI GR+GY
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKTRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
++ RLRVE + R G + +RRSD+RVLV+G SWQDLKD
Sbjct: 76 DYGQCRLRVEFPR------TYGGRGGWPRGGRNGPPTRRSDFRVLVSG-----SWQDLKD 124
Query: 129 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 183
HMR AGDVC++ V +D GM V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 125 HMREAGDVCYADVQKDGVGM---VEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 177
>gi|167515992|ref|XP_001742337.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778961|gb|EDQ92575.1| predicted protein [Monosiga brevicollis MX1]
Length = 164
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/164 (48%), Positives = 108/164 (65%), Gaps = 19/164 (11%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
SR +YVGNLP D R RE+++LFYKYG I+DI +K P YAF+ FED RDAEDA+ GR
Sbjct: 5 SRRVYVGNLPRDIRERELDELFYKYGRILDIHIKGP-----YAFVTFEDERDAEDAVHGR 59
Query: 66 DGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQD 125
DG NF G RLRVEL++ GRR ++ D +S + S++RVL+ GLP +ASWQD
Sbjct: 60 DGINFAGGRLRVELSNPGRRGANPRDNFS----------GKHSEFRVLIKGLPRTASWQD 109
Query: 126 LKDHMRRA-GDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLD 168
+KD + DV F+ V RD GM ++ + +DM +A+ K++
Sbjct: 110 VKDFFKDERLDVVFTDVNRDGVGMA---EFGNQEDMNFALDKMN 150
>gi|383422447|gb|AFH34437.1| serine/arginine-rich splicing factor 9 [Macaca mulatta]
Length = 216
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/176 (49%), Positives = 114/176 (64%), Gaps = 15/176 (8%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++EDLFYKYG I +I+LK +AF+ FED RDAEDAI GR+GY
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
++ RLRVE + R G + +RRSD+RVLV+G SWQDLKD
Sbjct: 76 DYGQCRLRVEFPR------TYGGRGGWPRGGRNGPPTRRSDFRVLVSG-----SWQDLKD 124
Query: 129 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 183
HMR AGDVC++ V +D GM V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 125 HMREAGDVCYADVQKDGVGM---VEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 177
>gi|12860555|dbj|BAB31986.1| unnamed protein product [Mus musculus]
Length = 190
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/163 (52%), Positives = 109/163 (66%), Gaps = 16/163 (9%)
Query: 25 DLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVEL--AHG 82
DLFYKYG I +I+LK +AF+ FED RDAEDAI GR+GY++ RLRVE +G
Sbjct: 1 DLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGYDYGQCRLRVEFPRTYG 60
Query: 83 GRRHSSSMDRYSSYSSGGSRGV-SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQV 141
GR + G G +RRSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V
Sbjct: 61 GR---------GGWPRGARNGPPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADV 111
Query: 142 FRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 183
+D GM G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 112 QKD--GM-GMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 151
>gi|237841065|ref|XP_002369830.1| splicing factor, putative [Toxoplasma gondii ME49]
gi|211967494|gb|EEB02690.1| splicing factor, putative [Toxoplasma gondii ME49]
Length = 512
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/183 (43%), Positives = 111/183 (60%), Gaps = 12/183 (6%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIP-PRPPGYAFLEFEDYRDAEDAIRGRDG 67
++V NLP D E+EDLFYK+G I DI+++ AF++F +Y+ A+DAI GRDG
Sbjct: 22 IFVANLPLDVTENELEDLFYKFGRIEDIEMRRDRTNDSTIAFVQFAEYKAADDAIEGRDG 81
Query: 68 YNFDGYRLRVELAHGGRRHSSSMDRYSSYS-------SGGSRGVSRRSDYRVLVTGLPSS 120
+ +R+R+E + R R +G + G RRS++RV V GLP +
Sbjct: 82 AHLGFHRIRIERSRQRLRRPGEFRRDRGGYGGRESGGNGPAYGPPRRSEFRVRVYGLPPT 141
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSY 180
ASWQDLKDHMRRAGDV ++ + G G+V+Y++ DDM YA+RKL S FRN F +
Sbjct: 142 ASWQDLKDHMRRAGDVGYANI----EGGVGVVEYSNGDDMDYALRKLHGSVFRNIFHTAK 197
Query: 181 VRV 183
+RV
Sbjct: 198 IRV 200
>gi|221483656|gb|EEE21968.1| hypothetical protein TGGT1_121760 [Toxoplasma gondii GT1]
Length = 513
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/183 (43%), Positives = 111/183 (60%), Gaps = 12/183 (6%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIP-PRPPGYAFLEFEDYRDAEDAIRGRDG 67
++V NLP D E+EDLFYK+G I DI+++ AF++F +Y+ A+DAI GRDG
Sbjct: 22 IFVANLPLDVTENELEDLFYKFGRIEDIEMRRDRTNDSTIAFVQFAEYKAADDAIEGRDG 81
Query: 68 YNFDGYRLRVELAHGGRRHSSSMDRYSSYS-------SGGSRGVSRRSDYRVLVTGLPSS 120
+ +R+R+E + R R +G + G RRS++RV V GLP +
Sbjct: 82 AHLGFHRIRIERSRQRLRRPGEFRRDRGGYGGRESGGNGPAYGPPRRSEFRVRVYGLPPT 141
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSY 180
ASWQDLKDHMRRAGDV ++ + G G+V+Y++ DDM YA+RKL S FRN F +
Sbjct: 142 ASWQDLKDHMRRAGDVGYANI----EGGVGVVEYSNGDDMDYALRKLHGSVFRNIFHTAK 197
Query: 181 VRV 183
+RV
Sbjct: 198 IRV 200
>gi|221504321|gb|EEE29996.1| arginine/serine-rich splicing factor, putative [Toxoplasma gondii
VEG]
Length = 513
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/183 (43%), Positives = 111/183 (60%), Gaps = 12/183 (6%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIP-PRPPGYAFLEFEDYRDAEDAIRGRDG 67
++V NLP D E+EDLFYK+G I DI+++ AF++F +Y+ A+DAI GRDG
Sbjct: 22 IFVANLPLDVTENELEDLFYKFGRIEDIEMRRDRTNDSTIAFVQFAEYKAADDAIEGRDG 81
Query: 68 YNFDGYRLRVELAHGGRRHSSSMDRYSSYS-------SGGSRGVSRRSDYRVLVTGLPSS 120
+ +R+R+E + R R +G + G RRS++RV V GLP +
Sbjct: 82 AHLGFHRIRIERSRQRLRRPGEFRRDRGGYGGRESGGNGPAYGPPRRSEFRVRVYGLPPT 141
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSY 180
ASWQDLKDHMRRAGDV ++ + G G+V+Y++ DDM YA+RKL S FRN F +
Sbjct: 142 ASWQDLKDHMRRAGDVGYANI----EGGVGVVEYSNGDDMDYALRKLHGSVFRNIFHTAK 197
Query: 181 VRV 183
+RV
Sbjct: 198 IRV 200
>gi|124802534|ref|XP_001347501.1| pre-mRNA splicing factor, putative [Plasmodium falciparum 3D7]
gi|23495082|gb|AAN35414.1|AE014832_36 pre-mRNA splicing factor, putative [Plasmodium falciparum 3D7]
Length = 538
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/183 (45%), Positives = 110/183 (60%), Gaps = 11/183 (6%)
Query: 3 SRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLK-IPPRPPGYAFLEFEDYRDAEDA 61
S+SS +YVGNLPG+ EV DLF KYG I ID+K YAF+ + D +DA+ A
Sbjct: 8 SKSSSCIYVGNLPGNVIEEEVYDLFGKYGRIKYIDIKPSRSSSSSYAFVHYYDLKDADYA 67
Query: 62 IRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSA 121
I RDGY FDG+RLRVE H G + S +Y G G R++ RV+VT LP +
Sbjct: 68 IERRDGYKFDGFRLRVE--HSG--ENRSFGKYRKKDDGV--GPPIRTENRVIVTNLPDNC 121
Query: 122 SWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYV 181
WQ LKD MR+ GDV ++ + R + GIV++ SYDDM YAI K D +EF+ + +
Sbjct: 122 RWQHLKDIMRQCGDVGYANIERGK----GIVEFVSYDDMLYAIEKFDGAEFKVYDDVTNI 177
Query: 182 RVR 184
+VR
Sbjct: 178 KVR 180
>gi|49037494|gb|AAT49042.1| splice factor [Toxoplasma gondii]
Length = 345
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/195 (42%), Positives = 116/195 (59%), Gaps = 13/195 (6%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIP-PRPPGYAFLEFEDYRDAEDAIRGRDG 67
++V NLP D E+EDLFYK+G I DI+++ AF++F +Y+ A+DAI GRDG
Sbjct: 22 IFVANLPLDVTENELEDLFYKFGRIEDIEMRRDRTNDSTIAFVQFAEYKAADDAIEGRDG 81
Query: 68 YNFDGYRLRVELAHGGRRHSSSMDRYSSYS-------SGGSRGVSRRSDYRVLVTGLPSS 120
+ +R+R+E + R R +G + G RRS++RV V GLP +
Sbjct: 82 AHLGFHRIRIERSRQRLRRPGEFRRDRGGYGGRESGGNGPAYGPPRRSEFRVRVYGLPPT 141
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSY 180
ASWQDLKDHMRRAGDV ++ + G G+V+Y++ DDM YA+RKL S FRN F +
Sbjct: 142 ASWQDLKDHMRRAGDVGYANI----EGGVGVVEYSNGDDMDYALRKLHGSVFRNIFHTAK 197
Query: 181 VRVREYDSRRSYSRS 195
+RV E D+ R R
Sbjct: 198 IRV-ERDTERGKPRE 211
>gi|221053983|ref|XP_002261739.1| pre-mRNA splicing factor [Plasmodium knowlesi strain H]
gi|193808199|emb|CAQ38902.1| pre-mRNA splicing factor, putative [Plasmodium knowlesi strain H]
Length = 495
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/186 (45%), Positives = 112/186 (60%), Gaps = 15/186 (8%)
Query: 3 SRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPG----YAFLEFEDYRDA 58
SR S +YVGNLPG+ EV DLF KYG I ID+K PR PG +AF+ + D RDA
Sbjct: 9 SRISSCIYVGNLPGNVVEDEVYDLFSKYGRIKYIDVK-KPRAPGVPYSFAFVHYFDSRDA 67
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLP 118
E AI RDGY +DG RLRVE + R S +Y + G G R+++R++++ LP
Sbjct: 68 EYAIDRRDGYKYDGVRLRVEYSGENR----SYGKYRNKEEGT--GPPVRTEHRIIISNLP 121
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSR 178
S WQ LKD MR+ GDV ++ V R +G +V++ S DDM YAI K D SEF+
Sbjct: 122 ESCKWQHLKDVMRQCGDVGYANVERGKG----VVEFISRDDMLYAIEKFDGSEFKVYDDV 177
Query: 179 SYVRVR 184
+ ++VR
Sbjct: 178 TNIKVR 183
>gi|402581303|gb|EJW75251.1| alternative splicing regulator, partial [Wuchereria bancrofti]
Length = 217
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 100/234 (42%), Positives = 132/234 (56%), Gaps = 33/234 (14%)
Query: 49 FLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRY--SSYSSGGSRGVSR 106
F + ED RDA DA+ GRDGY+FDG R+RVEL G S R
Sbjct: 1 FGKLEDCRDARDAVHGRDGYDFDGCRIRVELTRGVGPRGPGGRPLYGPDPRSPRRGPPPR 60
Query: 107 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 166
RS YRV+V+GLP + SWQDLKDHMR AG++C++ VFRD TG+V+YT+Y+DMKYA+RK
Sbjct: 61 RSGYRVIVSGLPDTGSWQDLKDHMRDAGEICYADVFRD---GTGVVEYTNYEDMKYALRK 117
Query: 167 LDRSEFRNAFSR-SYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYS 225
LD ++F++ +Y+RV+E + SP SRSRS +P +RS S YS
Sbjct: 118 LDDTKFKSHEGEVTYIRVKE---------ANINSPNRSRSRSHTPRKTRS-----SPKYS 163
Query: 226 P-----------RSRSYSPRGKYSRRSPSLSPARSASQRSPSGSPPRSFSRSGS 268
P R + RR S SP S++ RSPS + ++ SRSGS
Sbjct: 164 PTRSPSKSRSRSSRSRSHSRTSFVRR--STSPVHSSNSRSPSKTRSKTRSRSGS 215
>gi|156082103|ref|XP_001608544.1| pre-mRNA splicing factor [Plasmodium vivax Sal-1]
gi|148801115|gb|EDL42520.1| pre-mRNA splicing factor, putative [Plasmodium vivax]
Length = 544
Score = 136 bits (343), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 81/186 (43%), Positives = 111/186 (59%), Gaps = 15/186 (8%)
Query: 3 SRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPG----YAFLEFEDYRDA 58
+R S +YVGNLPG+ EV DLF K+G I ID+K PR PG +AF+ + D RDA
Sbjct: 9 NRISSCIYVGNLPGNVVEDEVYDLFAKFGRIKYIDVK-KPRAPGVPYSFAFVHYFDSRDA 67
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLP 118
E AI RDGY +DG RLRVE + + S +Y G G R+++R++++ LP
Sbjct: 68 EYAIDRRDGYKYDGVRLRVEYSG----ENKSYGKYRKKEEGA--GPPVRTEHRIIISNLP 121
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSR 178
S WQ LKD MR+ GDV ++ + R RG +V++ S DDM YAI K D SEF+
Sbjct: 122 ESCKWQHLKDVMRQCGDVGYANIERGRG----VVEFISRDDMLYAIEKFDGSEFKVYDDV 177
Query: 179 SYVRVR 184
+ ++VR
Sbjct: 178 TNIKVR 183
>gi|429329410|gb|AFZ81169.1| splicing factor 1, putative [Babesia equi]
Length = 207
Score = 136 bits (343), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 105/186 (56%), Gaps = 16/186 (8%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M S LYVGNLP D REVE+ F K+G IV +LK +AF+EF DYRDA D
Sbjct: 1 MESDKVVRLYVGNLPDDCTQREVEEEFEKFGKIVYCELKRTVSGLPFAFVEFSDYRDARD 60
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI+ +DG F+G RLRVE+ +R S D R+ Y V VTGLP +
Sbjct: 61 AIKNKDGAEFNGKRLRVEVPFSSKRQSRRSDP------------PRKGKYLVEVTGLPPT 108
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRS 179
SWQDLKDH+R AG+ + VFR G G V + S DM+YAI K D S F+ + ++
Sbjct: 109 GSWQDLKDHLRAAGECGHANVFR---GGVGEVSFFSRGDMEYAIDKFDGSTFKSHQGEKA 165
Query: 180 YVRVRE 185
+ VRE
Sbjct: 166 RITVRE 171
>gi|401399758|ref|XP_003880627.1| cDNA FLJ53078, highly similar to Splicing
factor,arginine/serine-rich 1, related [Neospora caninum
Liverpool]
gi|325115038|emb|CBZ50594.1| cDNA FLJ53078, highly similar to Splicing
factor,arginine/serine-rich 1, related [Neospora caninum
Liverpool]
Length = 448
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/193 (43%), Positives = 112/193 (58%), Gaps = 13/193 (6%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIP-PRPPGYAFLEFEDYRDAEDAIRGRDG 67
++V NLP D E+EDLFYK+G I DI+L+ AF++F DY+ A++AI GRDG
Sbjct: 23 IFVANLPLDVTENELEDLFYKFGRIEDIELRRDRTNDSTIAFVQFADYKAADEAIEGRDG 82
Query: 68 YNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR-------GVSRRSDYRVLVTGLPSS 120
+R+R+E + R R G G RRS++RV V GLP +
Sbjct: 83 TRLGFHRIRIERSRQRLRRPGEFGRSDRSGYGREGGGSGPAYGPPRRSEFRVRVYGLPPT 142
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSY 180
ASWQDLKDHMRRAGDV ++ + G G+V+Y++ DM YA+RKL S FRN F +
Sbjct: 143 ASWQDLKDHMRRAGDVGYANI----DGGVGVVEYSNGSDMDYALRKLHGSVFRNIFHTAK 198
Query: 181 VRVREYDSRRSYS 193
+RV E DS YS
Sbjct: 199 IRV-ERDSAGDYS 210
>gi|119614893|gb|EAW94487.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_b [Homo sapiens]
Length = 230
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/179 (46%), Positives = 109/179 (60%), Gaps = 24/179 (13%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R + + GP +AF+EFED RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKN-----RRGGPP-------------FAFVEFEDPRDAEDAVYGRDGY 59
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
++DGYRLRVE GR + R SRRS+ RV+V+GLP S SWQDL
Sbjct: 60 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 119
Query: 127 KDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 184
KDHMR AGDVC++ V+RD TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 120 KDHMREAGDVCYADVYRD---GTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 175
>gi|413948773|gb|AFW81422.1| hypothetical protein ZEAMMB73_489346 [Zea mays]
Length = 446
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/119 (57%), Positives = 80/119 (67%), Gaps = 2/119 (1%)
Query: 28 YKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 87
Y+YG I+DIDLKIPPRPP YA +EFED DA+DAI GRD YNFDGYRL + +A
Sbjct: 269 YQYGRILDIDLKIPPRPPRYAVVEFEDPHDADDAIYGRDEYNFDGYRLLLIVAEASLILM 328
Query: 88 SSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG 146
S ++ G V+VTGLPSS SWQDLKDHMRRAGDVCFS V+R+ G
Sbjct: 329 IVQAAISVHAVEVFLGA--LISMVVMVTGLPSSVSWQDLKDHMRRAGDVCFSDVYREVG 385
>gi|399216785|emb|CCF73472.1| unnamed protein product [Babesia microti strain RI]
Length = 230
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/183 (43%), Positives = 110/183 (60%), Gaps = 23/183 (12%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPR--PPGYAFLEFEDYRDAEDAI 62
++ +YV NLP D E++D FYK+G I I +K R YA++EF+ +DAI
Sbjct: 4 TNACIYVANLPPDITEHELDDKFYKFGRIRQITIKQSRRRDDECYAYIEFDSSSSVDDAI 63
Query: 63 RGRDGYNFDGYRLRVEL--AHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
+ RDGY F YR+ V++ GG+ SRG R+DYRV+V LPSS
Sbjct: 64 KYRDGYKFGRYRIFVDILREKGGK---------------SSRGPPMRTDYRVIVDNLPSS 108
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSY 180
ASWQDLKDHMR+AG V +S V R + G V+Y + DM++A+ LD+SEF+N +S+S
Sbjct: 109 ASWQDLKDHMRKAGPVGYSSVNRGK----GYVEYETKKDMEWALENLDKSEFKNIYSKSI 164
Query: 181 VRV 183
+RV
Sbjct: 165 IRV 167
>gi|307173759|gb|EFN64546.1| Splicing factor, arginine/serine-rich 1 [Camponotus floridanus]
Length = 262
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 100/159 (62%), Gaps = 15/159 (9%)
Query: 39 KIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSS 98
K+ P+ D RDAEDA+ RDGY++DGYRLRVE GG ++ + S
Sbjct: 54 KLEPKSKAPIISLQNDSRDAEDAVHARDGYDYDGYRLRVEFPRGGGPSNNFRGGRGAGDS 113
Query: 99 G-GSRGV----------SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 147
G G RG +RRS YRVLV+GLP + SWQDLKDHMR AGDVCF+ V++D
Sbjct: 114 GRGGRGEMSNSRGRGPPARRSQYRVLVSGLPPTGSWQDLKDHMREAGDVCFADVYKDG-- 171
Query: 148 MTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 185
TG+V++ +DDMKYA++KLD S FR + +Y+RVRE
Sbjct: 172 -TGVVEFLRHDDMKYAVKKLDDSRFRSHEGEVAYIRVRE 209
>gi|296004548|ref|XP_001351730.2| splicing factor, putative [Plasmodium falciparum 3D7]
gi|225631680|emb|CAD51537.2| splicing factor, putative [Plasmodium falciparum 3D7]
Length = 298
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/165 (45%), Positives = 96/165 (58%), Gaps = 3/165 (1%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP R+VE+ F KYG I+ D+K +AF+EFED RDA DAI+ +DG
Sbjct: 10 IYVGNLPSHVSSRDVENEFRKYGNILKCDVKKTVSGAAFAFIEFEDARDAADAIKEKDGC 69
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
+F+G +LRVE+ R + R SRR Y V VTGLP S SWQDLKD
Sbjct: 70 DFEGNKLRVEVPFNARENGRYNARGGGRGMMHRGPKSRRGRYVVEVTGLPISGSWQDLKD 129
Query: 129 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
H+R AG+ + VF+D TG V + + DDM AI K + S FR
Sbjct: 130 HLREAGECGHADVFKD---GTGEVSFFNKDDMLEAIDKFNGSIFR 171
>gi|428162693|gb|EKX31812.1| hypothetical protein GUITHDRAFT_82780, partial [Guillardia theta
CCMP2712]
Length = 208
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/175 (46%), Positives = 104/175 (59%), Gaps = 34/175 (19%)
Query: 11 VGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR-DGYN 69
VGNLP D R R+VEDLFYKYG ++P PP +AF+ FE DAEDA+RGR DG
Sbjct: 5 VGNLPLDIRTRDVEDLFYKYG-------RLPTIPPAFAFVSFEYPEDAEDAVRGRADGVM 57
Query: 70 FDGYRLRVELAHGGRRHSSSMDRYSSY--------------SSGGSRGVSR---RSDYRV 112
F+G RLRVE++ SS D Y + S G+R R RSD+R+
Sbjct: 58 FEGQRLRVEMSR------SSQDGYVEWGGSWVGKEEDGGRASQAGNRAPPRDLRRSDHRI 111
Query: 113 LVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKL 167
+++GLP SASWQDLKD R AG+V FS V R G GIV++ + D +YAI K+
Sbjct: 112 IISGLPPSASWQDLKDFFRSAGEVIFSDVDRQGG---GIVEFANKSDQEYAISKV 163
>gi|71033489|ref|XP_766386.1| hypothetical protein [Theileria parva strain Muguga]
gi|68353343|gb|EAN34103.1| hypothetical protein TP01_0865 [Theileria parva]
Length = 343
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/192 (42%), Positives = 108/192 (56%), Gaps = 17/192 (8%)
Query: 2 SSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRP--PGYAFLEFEDYRDAE 59
++RS ++VGNLP R+++DLF K+G I DID+K YAF+EF R AE
Sbjct: 8 ANRSPSCVFVGNLPDRVDERDIQDLFDKFGEIKDIDIKHGKTSNYTSYAFIEFASVRSAE 67
Query: 60 DAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSR------RSDYRVL 113
DA+ RDGY +D YRLRVE A G +R RY SY R S R+DYR++
Sbjct: 68 DAVDSRDGYEYDRYRLRVEFA-GEKRPR----RYPSYERPRDRDRSNRYPPPTRTDYRLV 122
Query: 114 VTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
++ LP WQ LKDHMR+AG V + + + G VD+ DMKYAIRKLD SE
Sbjct: 123 ISNLPHGCRWQHLKDHMRKAGPVGYVNIVHGK----GFVDFLHKSDMKYAIRKLDGSELS 178
Query: 174 NAFSRSYVRVRE 185
+RV++
Sbjct: 179 TPDDSCRIRVKK 190
>gi|70945413|ref|XP_742529.1| pre-mRNA splicing factor [Plasmodium chabaudi chabaudi]
gi|56521563|emb|CAH75989.1| pre-mRNA splicing factor, putative [Plasmodium chabaudi chabaudi]
Length = 373
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/209 (41%), Positives = 116/209 (55%), Gaps = 17/209 (8%)
Query: 1 MSSRSSR----TLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIP--PRPPGYAFLEFED 54
M RSSR +YVGNLPG+ EV DLF KYG I ID+K+ YAF+ + D
Sbjct: 1 MGYRSSRYRTSCIYVGNLPGNVLEDEVYDLFGKYGRIKYIDIKLTRGSSSTAYAFVHYYD 60
Query: 55 YRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLV 114
+DAE AI RDGY FDG RLRVE + + S +Y G G R+++R++V
Sbjct: 61 IKDAEYAIERRDGYKFDGERLRVEFSG----ENKSFGKYRRKEDG--IGPPLRTEHRIIV 114
Query: 115 TGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRN 174
+ LP + WQ LKD MR+ GDV ++ + + GIV++ D M YAI K DR+EF+
Sbjct: 115 SNLPDNCKWQHLKDIMRQCGDVGYANIEHGK----GIVEFVDRDGMLYAIEKFDRAEFKV 170
Query: 175 AFSRSYVRVREYDSRRSYSRSPSRSPYYS 203
+ ++VR SY + RS YYS
Sbjct: 171 HDQVTNIKVRRDKRSLSYIK-KHRSDYYS 198
>gi|84998374|ref|XP_953908.1| splicing factor (SR protein) [Theileria annulata]
gi|65304906|emb|CAI73231.1| splicing factor (SR protein), putative [Theileria annulata]
Length = 341
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 107/192 (55%), Gaps = 17/192 (8%)
Query: 2 SSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRP--PGYAFLEFEDYRDAE 59
++RS ++VGNLP R++ DLF K+G I D+D+K YAF+EF R AE
Sbjct: 8 ANRSPSCVFVGNLPDRVDERDIHDLFDKFGEIKDVDIKHGKTSNYTSYAFIEFASVRSAE 67
Query: 60 DAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSR------RSDYRVL 113
DA+ RDGY +D YRLRVE A G ++ RY SY R S R+DYR++
Sbjct: 68 DAVDSRDGYEYDRYRLRVEFA-GEKKPR----RYPSYDRPRDRDRSNRYPPPTRTDYRLV 122
Query: 114 VTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
++ LP WQ LKDHMR+AG V + + + G VDY DMKYAIRKLD SE
Sbjct: 123 ISNLPHGCRWQHLKDHMRKAGPVGYVNIVHGK----GFVDYMHKSDMKYAIRKLDGSELT 178
Query: 174 NAFSRSYVRVRE 185
+RV++
Sbjct: 179 TPDDSCRIRVKK 190
>gi|83273559|ref|XP_729451.1| splicing factor [Plasmodium yoelii yoelii 17XNL]
gi|23487306|gb|EAA21016.1| splicing factor, arginine/serine-rich 4 [Plasmodium yoelii yoelii]
Length = 516
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/206 (41%), Positives = 117/206 (56%), Gaps = 15/206 (7%)
Query: 2 SSRSSRT--LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIP--PRPPGYAFLEFEDYRD 57
SSR +RT +YVGNLPG+ EV DLF K+G I ID+K+ YAF+ + D +D
Sbjct: 5 SSRYNRTSCIYVGNLPGNVLEDEVYDLFGKFGRIKYIDIKLTRGSSSTAYAFVHYYDIKD 64
Query: 58 AEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGL 117
AE AI RDGY FDG RLRVE + + S +Y G G R+++R++V+ L
Sbjct: 65 AEYAIERRDGYKFDGERLRVEFSG----ENKSFGKYRRKEDG--IGPPLRTEHRIIVSNL 118
Query: 118 PSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFS 177
P + WQ LKD MR+ GDV ++ + + GIV++ D M YAI K DR+EF+
Sbjct: 119 PDNCKWQHLKDIMRQCGDVGYANIEHGK----GIVEFVDRDGMLYAIEKFDRAEFKVHDQ 174
Query: 178 RSYVRVREYDSRRSYSRSPSRSPYYS 203
+ ++VR SY + RS YYS
Sbjct: 175 VTNIKVRRDKRSLSYIK-KHRSDYYS 199
>gi|324516767|gb|ADY46629.1| Splicing factor, arginine/serine-rich 3 [Ascaris suum]
Length = 210
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 70/140 (50%), Positives = 93/140 (66%), Gaps = 6/140 (4%)
Query: 38 LKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRY---S 94
+I R +F+EF+D RDA DA+RGRDGY+FDG RLRVEL G
Sbjct: 5 CQIHTRRTILSFIEFDDPRDARDAVRGRDGYSFDGCRLRVELTRGVGPRGPGGRPLYAAE 64
Query: 95 SYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDY 154
S RRS YRV+++GLP+S SWQDLKDHMR AGD+C+++V +D TG+V+Y
Sbjct: 65 QMSPRRRAPPPRRSGYRVVISGLPASGSWQDLKDHMREAGDICYAEVSKDG---TGVVEY 121
Query: 155 TSYDDMKYAIRKLDRSEFRN 174
+YDDMKYA+RKLD ++F++
Sbjct: 122 INYDDMKYAVRKLDDTKFKS 141
>gi|444720822|gb|ELW61591.1| Vascular endothelial zinc finger 1 [Tupaia chinensis]
Length = 399
Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 77/167 (46%), Positives = 101/167 (60%), Gaps = 23/167 (13%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
++DGYRLRVE GR + R SRRS+ RV+V+
Sbjct: 78 DYDGYRLRVEFPRSGRGAGRGGGGGGGGGAPRGRYGPPSRRSENRVVVS----------- 126
Query: 127 KDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
GDVC++ V+RD TG+V++ +DM YA+RKLD ++FR
Sbjct: 127 -------GDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFR 163
>gi|82540657|ref|XP_724630.1| splicing factor 1 [Plasmodium yoelii yoelii 17XNL]
gi|23479337|gb|EAA16195.1| splicing factor, arginine/serine-rich 1 [Plasmodium yoelii yoelii]
Length = 309
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 73/165 (44%), Positives = 97/165 (58%), Gaps = 5/165 (3%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP R+VE+ F K+G I+ D+K +AF+EFED RDA DAI+ +DG
Sbjct: 10 IYVGNLPSHVTSRDVENEFRKFGTILKCDVKKTVSGAAFAFIEFEDARDAADAIKEKDGC 69
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
+F G +LRVE+ R + R GS+ SRR Y V V+GLP S SWQDLKD
Sbjct: 70 DFGGNKLRVEVPFNARDNGKYNSRGRGMMGRGSK--SRRGRYVVEVSGLPLSGSWQDLKD 127
Query: 129 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
H+R AG+ + VF++ TG V + +DM AI K + S FR
Sbjct: 128 HLREAGECGHADVFKN---GTGEVSFFHKEDMLEAIEKFNGSTFR 169
>gi|412989158|emb|CCO15749.1| predicted protein [Bathycoccus prasinos]
Length = 347
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/202 (42%), Positives = 106/202 (52%), Gaps = 26/202 (12%)
Query: 8 TLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDG 67
T++VGNLP D R RE++DLFYKYG IV I + PP +AF+EFED RDAEDA RDG
Sbjct: 16 TIFVGNLPLDIRERELDDLFYKYGRIVHIKMPRCNHPPAFAFIEFEDKRDAEDAQYYRDG 75
Query: 68 YNFDGYRLRVEL------------------------AHGGRRHSSSMDRYSSYSSGGSRG 103
Y FDG RLRVE+ GGR S+ +R GS
Sbjct: 76 YEFDGNRLRVEISKGSSGGGGFGGTRDDRGGGERGGRGGGRFGGSADERGGGRGGRGSFE 135
Query: 104 VSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD--RGGMTGIVDYTSYDDMK 161
RR+++ V+V LP ASWQDLKD RR+G V ++ F D G G VD+ D +
Sbjct: 136 RPRRTEFCVVVRNLPPRASWQDLKDFFRRSGKVTYANAFIDSNTGEQIGEVDFEYLTDAE 195
Query: 162 YAIRKLDRSEFRNAFSRSYVRV 183
A D EF N F S ++
Sbjct: 196 NACDDCDGIEFENRFGVSKIQC 217
>gi|84996527|ref|XP_952985.1| splicing factor [Theileria annulata strain Ankara]
gi|65303981|emb|CAI76360.1| splicing factor, putative [Theileria annulata]
Length = 269
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/166 (46%), Positives = 98/166 (59%), Gaps = 10/166 (6%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+GNLP D RE+E+ F K+G I+ DLK +AF+EF D RDA DAIR +DGY
Sbjct: 9 IYIGNLPEDCSQRELEEEFEKFGRIIYCDLKKSYSGSPFAFIEFSDSRDARDAIRDKDGY 68
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
F G +LRVEL R+ R SS G +RR Y + VTGLP + SWQDLKD
Sbjct: 69 EFHGKKLRVELPF---RYRDEPRRPSSRRY----GTTRRGKYVLEVTGLPPTGSWQDLKD 121
Query: 129 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRN 174
HMR AG+ + VFR G G + + S DM YAI + D S FR+
Sbjct: 122 HMRDAGECGHADVFR---GGVGEITFFSRSDMDYAIERFDGSTFRS 164
>gi|156084620|ref|XP_001609793.1| splicing factor, arginine/serine-rich 3 [Babesia bovis T2Bo]
gi|154797045|gb|EDO06225.1| splicing factor, arginine/serine-rich 3, putative [Babesia bovis]
Length = 239
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 101/178 (56%), Gaps = 11/178 (6%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP +++ED F K+G ++ DLK +AFLE+ED RDA DAI+ RDG
Sbjct: 10 VYVGNLPESCTQKDIEDEFGKFGKLISCDLKKNAGGSTFAFLEYEDARDAHDAIKDRDGS 69
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
++G RLRVE + R + RR Y V V+GLP + SWQDLKD
Sbjct: 70 EYEGRRLRVETPFSAKDDGRPARRRGPGA-------PRRGRYIVEVSGLPPTGSWQDLKD 122
Query: 129 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 185
HMR AG+ + VFR G G V + S DM+YAI K D S F+ + +S +RVRE
Sbjct: 123 HMREAGECAHADVFR---GGVGEVSFYSRSDMEYAIDKFDGSTFKSHEGEKSKIRVRE 177
>gi|156095500|ref|XP_001613785.1| splicing factor, arginine/serine-rich 1 [Plasmodium vivax Sal-1]
gi|148802659|gb|EDL44058.1| splicing factor, arginine/serine-rich 1, putative [Plasmodium
vivax]
Length = 314
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/190 (43%), Positives = 112/190 (58%), Gaps = 12/190 (6%)
Query: 1 MSSRSSRT-LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAE 59
MS R S + +YVGNLP R+VE+ F KYG I+ D+K +AF+EFED RDA
Sbjct: 1 MSMRESISRIYVGNLPSHVTPRDVENEFRKYGTILKCDVKKTVSGAAFAFIEFEDARDAA 60
Query: 60 DAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV---SRRSDYRVLVTG 116
DAI+ +DG +F G +LRVE+ R + +YSS G G SRR Y V V+G
Sbjct: 61 DAIKEKDGCDFGGNKLRVEVPFNARDNG----KYSSRGGRGMMGRGMKSRRGRYVVEVSG 116
Query: 117 LPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NA 175
LP S SWQDLKDH+R AG+ + VF++ G+ G V + +DM AI K + S FR +
Sbjct: 117 LPLSGSWQDLKDHLREAGECGHADVFKN--GL-GEVSFFHKEDMLEAIEKFNGSTFRSHE 173
Query: 176 FSRSYVRVRE 185
+S + +R+
Sbjct: 174 GEKSKITIRQ 183
>gi|389584162|dbj|GAB66895.1| splicing factor arginine/serine-rich 1 [Plasmodium cynomolgi strain
B]
Length = 316
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/190 (43%), Positives = 112/190 (58%), Gaps = 12/190 (6%)
Query: 1 MSSRSSRT-LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAE 59
MS R S + +YVGNLP R+VE+ F KYG I+ D+K +AF+EFED RDA
Sbjct: 1 MSMRESISRIYVGNLPSHVTPRDVENEFRKYGTILKCDVKKTVSGAAFAFIEFEDARDAA 60
Query: 60 DAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV---SRRSDYRVLVTG 116
DAI+ +DG +F G +LRVE+ R + +Y+S G G SRR Y V V+G
Sbjct: 61 DAIKEKDGCDFGGNKLRVEVPFNARDNG----KYNSRGGRGMMGRGMKSRRGRYVVEVSG 116
Query: 117 LPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NA 175
LP S SWQDLKDH+R AG+ + VF++ G+ G V + +DM AI K + S FR +
Sbjct: 117 LPLSGSWQDLKDHLREAGECGHADVFKN--GL-GEVSFFHKEDMLEAIEKFNGSTFRSHE 173
Query: 176 FSRSYVRVRE 185
+S + +RE
Sbjct: 174 GEKSKITIRE 183
>gi|399219025|emb|CCF75912.1| unnamed protein product [Babesia microti strain RI]
Length = 227
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 79/178 (44%), Positives = 99/178 (55%), Gaps = 16/178 (8%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP + RE+E+ F K+G I D+K +AF+EFED RDA+DAI+ +DGY
Sbjct: 10 VYVGNLPSECDQREIEEEFEKFGKIKRCDVKRGANGSSFAFVEFEDPRDAKDAIKEKDGY 69
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
F G RLRVE+ R +S R RR Y V V GLP S SWQDLKD
Sbjct: 70 EFKGSRLRVEVPFSDRGYSR------------RRPTPRRGHYTVEVLGLPPSGSWQDLKD 117
Query: 129 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 185
HMR AG+ + VFR G G V + S DM AI D S FR + ++ + VRE
Sbjct: 118 HMRDAGECGHADVFR---GGVGEVSFFSRRDMDAAIEMFDGSTFRSHEGEKAKITVRE 172
>gi|351700803|gb|EHB03722.1| Splicing factor, arginine/serine-rich 9 [Heterocephalus glaber]
Length = 266
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/217 (43%), Positives = 124/217 (57%), Gaps = 23/217 (10%)
Query: 8 TLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDG 67
+YV NL R K G I +I+LK +AF+ F+D RDAEDAI GR+G
Sbjct: 65 CIYVANLRQTCSRRTC-----KCGRICEIELKNRHGLVPFAFVRFKDPRDAEDAICGRNG 119
Query: 68 YNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLK 127
Y++ RLRVE + R G + +R SD+RVLV+GLP S SWQDLK
Sbjct: 120 YDYGQCRLRVEFPR------TYGGRGGCPRGGRTGAPARGSDFRVLVSGLPPSGSWQDLK 173
Query: 128 DHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV--- 183
DH+ AGDVC++ V +D GM G+V++ +DM YA+RKLD ++FR + SY+RV
Sbjct: 174 DHIPEAGDVCYADVQKD--GM-GMVEHLRKEDMDYALRKLDDTKFRSHEGETSYIRVYPE 230
Query: 184 REYDSRRSYSRSPSR---SPYYSRSRSRSPYYSRSRS 217
R S+SRS SR SPY +SR PY+S RS
Sbjct: 231 RNTSYCYSWSRSGSRDLDSPY--QSRGSPPYFSPFRS 265
>gi|449480417|ref|XP_002196866.2| PREDICTED: serine/arginine-rich splicing factor 1 [Taeniopygia
guttata]
Length = 210
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 69/132 (52%), Positives = 89/132 (67%), Gaps = 6/132 (4%)
Query: 56 RDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVL 113
RDAEDA+ GRDGY++DGYRLRVE GR + R SRRS+YRV+
Sbjct: 22 RDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSEYRVI 81
Query: 114 VTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
V+GLP S SWQDLKDHMR AGDVC++ VFRD TG+V++ +DM YA+RKLD ++FR
Sbjct: 82 VSGLPPSGSWQDLKDHMREAGDVCYADVFRD---GTGVVEFVRKEDMTYAVRKLDNTKFR 138
Query: 174 -NAFSRSYVRVR 184
+ +Y+RV+
Sbjct: 139 SHEGETAYIRVK 150
>gi|449529130|ref|XP_004171554.1| PREDICTED: pre-mRNA-splicing factor SF2-like, partial [Cucumis
sativus]
Length = 158
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 55/75 (73%), Positives = 67/75 (89%)
Query: 113 LVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
+V GLPSSASWQDLKDHMR+AGDVCF++V RD G GIVDYT+YDDMKYAIRKLD +EF
Sbjct: 1 IVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEF 60
Query: 173 RNAFSRSYVRVREYD 187
RN ++R+Y+RV++YD
Sbjct: 61 RNPWARAYIRVKKYD 75
>gi|298710995|emb|CBJ32302.1| arginine/serine-rich splicing factor 6 [Ectocarpus siliculosus]
Length = 235
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/177 (42%), Positives = 103/177 (58%), Gaps = 22/177 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G+L TR R+++ F +YG I ID+++ G+AF+EFED RDAEDA+ DG
Sbjct: 5 IYIGHLSPHTRDRDLDRAFGRYGRIEKIDVRM-----GFAFIEFEDRRDAEDAVAEMDGR 59
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
FDG R+ V+ G R G + +RR+++R+ V GL S SWQDLKD
Sbjct: 60 EFDGARIVVQPGRGHR-------------PNGPKFATRRTEHRITVEGLDSHTSWQDLKD 106
Query: 129 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVRE 185
R+AG V +S VF +G G+V+Y S DDMK AIR LD + Y+RVRE
Sbjct: 107 FGRQAGQVLYSDVFFRQGRRWGVVEYVSRDDMKAAIRTLDDTR----LGGKYIRVRE 159
>gi|320038617|gb|EFW20552.1| pre-RNA splicing factor Srp2 [Coccidioides posadasii str. Silveira]
gi|392870837|gb|EJB12074.1| pre-RNA splicing factor Srp2 [Coccidioides immitis RS]
Length = 302
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/252 (37%), Positives = 127/252 (50%), Gaps = 39/252 (15%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDA 58
MS SS LY+GNLP + ++VE+ F ++G I DI L G+ F+E+ED DA
Sbjct: 1 MSEVSSTRLYLGNLPRNVTKQDVEEHFNQHGSGKITDIKLMS-----GFGFIEYEDALDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLP 118
D + G +F G RL V+ A G R + +S S + RR+ YR+ ++GLP
Sbjct: 56 RDVVPAYHGTDFKGSRLTVQFARGPRHKET----FSGPSDRSNAPRPRRTPYRMQISGLP 111
Query: 119 SSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFS 177
+ SWQDLKD R++G DV +S+ RD G G V++ + D+K AI KLD EF+ +
Sbjct: 112 ET-SWQDLKDFARQSGLDVVYSETLRDHEG-RGFVEFETGADLKTAIEKLDGREFKGSRV 169
Query: 178 RSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRS-------RS 230
++ D R P R PY RSRSP R Y P R
Sbjct: 170 TCTQDIQAPDDR------PVRDPY------------RSRSPVRRGGYPPMDDYDRRPPRG 211
Query: 231 YSPRGKYSRRSP 242
YSPRG Y RSP
Sbjct: 212 YSPRGHYRERSP 223
>gi|71028610|ref|XP_763948.1| splicing factor [Theileria parva strain Muguga]
gi|68350902|gb|EAN31665.1| splicing factor, putative [Theileria parva]
Length = 257
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 96/169 (56%), Gaps = 16/169 (9%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+GNLP D RE+E+ F K+G I+ +LK +AF+EF D RDA DAIR +DGY
Sbjct: 9 IYIGNLPEDCSQRELEEEFEKFGRIIYCELKKSYSGSPFAFIEFSDSRDARDAIRDKDGY 68
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSY---SSGGSRGVSRRSDYRVLVTGLPSSASWQD 125
F G +LRVEL RY SG +RR Y + VTGLP S SWQD
Sbjct: 69 EFHGKKLRVELPF----------RYKDEPRRPSGRRYRTTRRGKYVLEVTGLPPSGSWQD 118
Query: 126 LKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRN 174
LKDHMR AG+ + VFR G G + + S DM YAI + D S FR+
Sbjct: 119 LKDHMRDAGECGHADVFR---GGVGEITFFSRSDMDYAIERFDGSTFRS 164
>gi|198436398|ref|XP_002124933.1| PREDICTED: similar to splicing factor, arginine/serine-rich 1,
partial [Ciona intestinalis]
Length = 166
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/129 (48%), Positives = 91/129 (70%), Gaps = 7/129 (5%)
Query: 57 DAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTG 116
DA+DA+R R+GYNFDGY+L+VE R S R S+Y G S+R++YRV+V G
Sbjct: 1 DADDAVRARNGYNFDGYKLKVERP---RSSSGFQGRPSNYIRGRPGPPSKRTEYRVIVEG 57
Query: 117 LPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NA 175
LP S SWQDLKDHMR AGDVC++ V+RD +G+V++ + +DMK+A++ +D ++FR +
Sbjct: 58 LPGSGSWQDLKDHMREAGDVCYADVYRD---GSGVVEFVNKEDMKFALKHMDDTKFRSHE 114
Query: 176 FSRSYVRVR 184
SY+RV+
Sbjct: 115 GETSYIRVK 123
>gi|303317336|ref|XP_003068670.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240108351|gb|EER26525.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
Length = 300
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/252 (37%), Positives = 128/252 (50%), Gaps = 41/252 (16%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKY--GPIVDIDLKIPPRPPGYAFLEFEDYRDA 58
MS SS LY+GNLP + ++VE+ F ++ G I DI L G+ F+E+ED DA
Sbjct: 1 MSEVSSTRLYLGNLPRNVTKQDVEEHFNQHGSGKITDIKLMS-----GFGFIEYEDALDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLP 118
D + DG +F G RL V+ A G R + +S S + RR+ YR+ ++GLP
Sbjct: 56 RDVV--PDGTDFKGSRLTVQFARGPRHKET----FSGPSDRSNAPRPRRTPYRMQISGLP 109
Query: 119 SSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFS 177
+ SWQDLKD R++G DV +S+ RD G G V++ + D+K AI KLD EF+ +
Sbjct: 110 ET-SWQDLKDFARQSGLDVVYSETLRDHEG-RGFVEFETGADLKTAIEKLDGREFKGSRV 167
Query: 178 RSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRS-------RS 230
++ D R P R PY RSRSP R Y P R
Sbjct: 168 TCTQDIQAPDDR------PVRDPY------------RSRSPVRRGGYPPMDDYDRRPPRG 209
Query: 231 YSPRGKYSRRSP 242
YSPRG Y RSP
Sbjct: 210 YSPRGHYRERSP 221
>gi|326932930|ref|XP_003212564.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Meleagris
gallopavo]
Length = 475
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/172 (42%), Positives = 102/172 (59%), Gaps = 18/172 (10%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSG-GSRGVSR-------RSDYRVLVTGLPSS 120
+ G R+ VE A G RR SS Y S SG G R R R++YR++V L S
Sbjct: 59 DLCGERVIVEHARGPRRDSS----YGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSR 114
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
SWQDLKD+MR+AG+V ++ + R G++++ SY DMK A+ KLD +E
Sbjct: 115 CSWQDLKDYMRQAGEVTYADAHKGRKN-EGVIEFKSYSDMKRALEKLDGTEV 165
>gi|242782227|ref|XP_002479958.1| electron transfer flavoprotein-ubiquinone oxidoreductase [Talaromyces
stipitatus ATCC 10500]
gi|218720105|gb|EED19524.1| electron transfer flavoprotein-ubiquinone oxidoreductase [Talaromyces
stipitatus ATCC 10500]
Length = 1100
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/246 (35%), Positives = 126/246 (51%), Gaps = 23/246 (9%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLF--YKYGPIVDIDLKIPPRPPGYAFLEFEDYRDA 58
MS SS LY+GNLP + +++E+ F + G I +I L G+ F+E+ED DA
Sbjct: 796 MSEVSSTRLYLGNLPRNVTKKDIEEYFGSHGTGKITEIKLMN-----GFGFIEYEDAMDA 850
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLP 118
D + G +F G RL V+ A G R + ++ S + RR+ +R+ V+GLP
Sbjct: 851 RDVVPAFHGSDFKGERLTVQFARGPRHKET----FNGPSDRPAAPRPRRTVFRMQVSGLP 906
Query: 119 SSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFS 177
+ SWQDLKD R++G DV +S+ R+R G G V++ S+ D+K A+ KLD E + +
Sbjct: 907 TETSWQDLKDFARQSGLDVVYSETTRERDG-RGFVEFESHADLKTAVEKLDGRELKGSQV 965
Query: 178 RSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYSPRGKY 237
D + + R+P R PY SRS R R P + R YSPR Y
Sbjct: 966 TCVA-----DVQPAEERAPYRDPYRSRSPPR-----RGYPPMDDYDRRGPPRGYSPRQHY 1015
Query: 238 SRRSPS 243
RSP
Sbjct: 1016 RERSPQ 1021
>gi|427777415|gb|JAA54159.1| Putative alternative splicing factor [Rhipicephalus pulchellus]
Length = 484
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/165 (44%), Positives = 99/165 (60%), Gaps = 8/165 (4%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG+L R R++E F +G I ++ LK G+ F+EF+DYRDA+DA+ +G
Sbjct: 4 VYVGHLSYRVRERDLERFFRGFGKIREVLLK-----NGFGFVEFDDYRDADDAVYELNGR 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLK 127
DG R+ VELAHG R R + SG +R G R+DYRV++ L S SWQDLK
Sbjct: 59 ELDGERVVVELAHGTARRPPPP-RSAWADSGTNRYGPPTRTDYRVIIENLSSRISWQDLK 117
Query: 128 DHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
D MR+ GDV ++ R R G+V++ SY DMK AI KLD +E
Sbjct: 118 DRMRQVGDVTYADAHRHRRN-EGVVEFASYSDMKRAIEKLDNTEI 161
>gi|165377173|ref|NP_065612.2| serine/arginine-rich splicing factor 4 [Mus musculus]
gi|26449170|dbj|BAC36925.1| unnamed protein product [Mus musculus]
gi|74152317|dbj|BAE33925.1| unnamed protein product [Mus musculus]
gi|148698178|gb|EDL30125.1| splicing factor, arginine/serine-rich 4 (SRp75) [Mus musculus]
Length = 491
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 100/168 (59%), Gaps = 10/168 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
+ G R+ VE A G RR S S Y SG + G R++YR++V L S SWQ
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
DLKD+MR+AG+V ++ + R G++++ SY DMK A+ KLD +E
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEKLDGTEV 165
>gi|301104435|ref|XP_002901302.1| splicing factor, arginine/serine-rich, putative [Phytophthora
infestans T30-4]
gi|262100777|gb|EEY58829.1| splicing factor, arginine/serine-rich, putative [Phytophthora
infestans T30-4]
Length = 214
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 100/179 (55%), Gaps = 24/179 (13%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VGNLP D R RE+ D F +YG I + +K P RPP +AFL +E+ +DA DA+R +
Sbjct: 4 VFVGNLPEDVRERELSDKFERYGRITSVRIKFPARPPPFAFLTYENEQDASDAVRSMNNT 63
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
F G R+RVE++ G RG + YRV ++GLP + SWQDLKD
Sbjct: 64 TFGGSRIRVEMSRG-------------IDDARPRG----TQYRVKISGLPDTMSWQDLKD 106
Query: 129 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYD 187
+R+ GDV S V DR G G + + D+M AIRKLD ++ VR+RE D
Sbjct: 107 FLRKGGDVVHSDV--DRRG-NGSASFATPDEMLRAIRKLDGTDLDG----ERVRIREDD 158
>gi|20978758|sp|Q8VE97.1|SRSF4_MOUSE RecName: Full=Serine/arginine-rich splicing factor 4; AltName:
Full=Splicing factor, arginine/serine-rich 4
gi|18043896|gb|AAH19437.1| Sfrs4 protein [Mus musculus]
Length = 489
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 100/168 (59%), Gaps = 10/168 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
+ G R+ VE A G RR S S Y SG + G R++YR++V L S SWQ
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
DLKD+MR+AG+V ++ + R G++++ SY DMK A+ KLD +E
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEKLDGTEV 165
>gi|384494440|gb|EIE84931.1| hypothetical protein RO3G_09641 [Rhizopus delemar RA 99-880]
Length = 252
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/172 (41%), Positives = 99/172 (57%), Gaps = 19/172 (11%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS+R +Y+G L D R++E LF YG I +I+LK G+ F+EF D RDA+D
Sbjct: 1 MSTR----VYIGRLARDASKRDIERLFKNYGDIREINLKT-----GFGFVEFADERDAKD 51
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
+ G +F G RL VE+A G RRH R + S RS YR++V +
Sbjct: 52 VVYDFHGKSFLGERLIVEIAKGTRRHDERRPRGNDRS---------RSHYRLIVENIAPG 102
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
+WQDLKD MR+AG+V F+ + RDR GIV++ DDM+YA++KL+ E
Sbjct: 103 TNWQDLKDMMRKAGEVTFADISRDRPS-EGIVEFHVRDDMEYALKKLNDREL 153
>gi|157822515|ref|NP_001102155.1| splicing factor, arginine/serine-rich 4 [Rattus norvegicus]
gi|149024115|gb|EDL80612.1| similar to Sfrs4 protein (predicted) [Rattus norvegicus]
Length = 488
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 100/168 (59%), Gaps = 10/168 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
+ G R+ VE A G RR S S Y SG + G R++YR++V L S SWQ
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
DLKD+MR+AG+V ++ + R G++++ SY DMK A+ KLD +E
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEKLDGTEV 165
>gi|425767261|gb|EKV05835.1| Pre-RNA splicing factor Srp2, putative [Penicillium digitatum
PHI26]
gi|425780059|gb|EKV18081.1| Pre-RNA splicing factor Srp2, putative [Penicillium digitatum Pd1]
Length = 303
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/248 (34%), Positives = 128/248 (51%), Gaps = 30/248 (12%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP + ++E+ F +G I +I L G+ F+E++D DA
Sbjct: 1 MTEVSSTRLYLGNLPRNVTKSDIEEHFSSHGSGKITEIKLMN-----GFGFIEYDDQLDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLP 118
D + G +F G RL V+ A G RR + + + RR+ +R+ ++GLP
Sbjct: 56 RDIVPAFHGSDFKGERLTVQFARGPRRKEA----FQGPPDRNALPRPRRTMFRMQISGLP 111
Query: 119 SSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFS 177
+ SWQDLKD R++G DV +S+ R++G G V++ + D+K A+ KLD+ EF+ +
Sbjct: 112 ET-SWQDLKDFARQSGLDVVYSETGREQG--RGFVEFETASDLKTAVEKLDQREFKGSVV 168
Query: 178 RSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYS---PRSRSYSPR 234
++ ++ R P R PY SRS R PY P+ Y P R YSPR
Sbjct: 169 SCVADIQNFEER------PVRDPYRSRSPPRRPY------PATMEEYDRRIPPPRGYSPR 216
Query: 235 GKYSRRSP 242
Y RSP
Sbjct: 217 DHYRERSP 224
>gi|68075657|ref|XP_679748.1| splicing factor [Plasmodium berghei strain ANKA]
gi|56500569|emb|CAH96908.1| splicing factor, putative [Plasmodium berghei]
Length = 287
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/139 (45%), Positives = 84/139 (60%), Gaps = 2/139 (1%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP R+VE+ F K+G I+ D+K +AF+EFED RDA DAI+ +DG
Sbjct: 10 IYVGNLPSHVTSRDVENEFRKFGTILKCDVKKTVSGAAFAFIEFEDARDAADAIKEKDGC 69
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
+F G +LRVE+ R + R GS+ SRR Y V V+GLP S SWQDLKD
Sbjct: 70 DFGGNKLRVEVPFNARDNGKYNSRGRGMMGRGSK--SRRGRYVVEVSGLPLSGSWQDLKD 127
Query: 129 HMRRAGDVCFSQVFRDRGG 147
H+R AG+ + VF++ G
Sbjct: 128 HLREAGECGHADVFKNGTG 146
>gi|300121283|emb|CBK21663.2| unnamed protein product [Blastocystis hominis]
Length = 381
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/175 (43%), Positives = 104/175 (59%), Gaps = 14/175 (8%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++V NLP D R E++D F +YG ++D+ LK+ P Y F+EFE+ AE+A++G++G
Sbjct: 5 VFVANLPKDVRESELKDEFSRYGTVIDVTLKLTGHTP-YGFVEFEEESAAEEAVKGKNGS 63
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
G LRVE+A+G DR S Y G ++YRV VT LP SWQDLKD
Sbjct: 64 VLGGLSLRVEVANG---RGPKGDRGSKY------GPPVHTNYRVEVTHLPYHCSWQDLKD 114
Query: 129 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRV 183
HMR+ GDV + V G GIV+YT+YDDM AI+ LD S+ + SY+ V
Sbjct: 115 HMRKEGDVGYCSV----DGGVGIVEYTNYDDMMRAIKYLDDSKCLSRGESSYIHV 165
>gi|348571040|ref|XP_003471304.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Cavia
porcellus]
Length = 497
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 100/168 (59%), Gaps = 10/168 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
+ G R+ VE A G RR S S Y SG + G R++YR++V L S SWQ
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
DLKD+MR+AG+V ++ + R G++++ SY DMK A+ KLD +E
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEKLDGTEV 165
>gi|70947849|ref|XP_743501.1| splicing factor [Plasmodium chabaudi chabaudi]
gi|56523027|emb|CAH75823.1| splicing factor, putative [Plasmodium chabaudi chabaudi]
Length = 283
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/141 (46%), Positives = 86/141 (60%), Gaps = 6/141 (4%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP R+VE+ F K+G I+ D+K +AF+EFED RDA DAI+ +DG
Sbjct: 10 IYVGNLPSHVTSRDVENEFRKFGTILKCDVKKTVSGAAFAFIEFEDARDAADAIKEKDGC 69
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSG--GSRGVSRRSDYRVLVTGLPSSASWQDL 126
+F G +LRVE+ R + +YSS G G SRR Y V V+GLP S SWQDL
Sbjct: 70 DFGGNKLRVEVPFNARDNG----KYSSRGRGMMGRGSKSRRGRYVVEVSGLPLSGSWQDL 125
Query: 127 KDHMRRAGDVCFSQVFRDRGG 147
KDH+R AG+ + VF++ G
Sbjct: 126 KDHLREAGECGHADVFKNGTG 146
>gi|126328783|ref|XP_001365267.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Monodelphis
domestica]
Length = 491
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 100/168 (59%), Gaps = 10/168 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
+ G R+ VE A G RR S S Y SG + G R++YR++V L S SWQ
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
DLKD+MR+AG+V ++ + R G++++ SY DMK A+ KLD +E
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEKLDGTEV 165
>gi|281340422|gb|EFB16006.1| hypothetical protein PANDA_019831 [Ailuropoda melanoleuca]
Length = 488
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 100/168 (59%), Gaps = 10/168 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
+ G R+ VE A G RR S S Y SG + G R++YR++V L S SWQ
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
DLKD+MR+AG+V ++ + R G++++ SY DMK A+ KLD +E
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEKLDGTEV 165
>gi|301788378|ref|XP_002929604.1| PREDICTED: hypothetical protein LOC100475275 [Ailuropoda
melanoleuca]
Length = 498
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 100/168 (59%), Gaps = 10/168 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
+ G R+ VE A G RR S S Y SG + G R++YR++V L S SWQ
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
DLKD+MR+AG+V ++ + R G++++ SY DMK A+ KLD +E
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEKLDGTEV 165
>gi|221057011|ref|XP_002259643.1| Splicing factor [Plasmodium knowlesi strain H]
gi|193809715|emb|CAQ40417.1| Splicing factor, putative [Plasmodium knowlesi strain H]
Length = 312
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 104/186 (55%), Gaps = 6/186 (3%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS SR +YVGNLP R+VE+ F KYG I+ D+K +AF+EFED RDA D
Sbjct: 3 MSESISR-IYVGNLPSHVSPRDVENEFRKYGNILKCDVKKTVSGAAFAFIEFEDARDAAD 61
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI+ +DG ++ G +LRVE+ R + G SRR Y V V+GLP S
Sbjct: 62 AIKEKDGSDYGGNKLRVEVPFNA-RDNGKYGPRGGRGMMGRGMRSRRGRYVVEVSGLPLS 120
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRS 179
SWQDLKDH+R AG+ + VF++ G V + +DM AI K + S FR + +S
Sbjct: 121 GSWQDLKDHLREAGECGHADVFKNG---IGEVSFFHKEDMLEAIEKFNGSTFRSHEGEKS 177
Query: 180 YVRVRE 185
+ +RE
Sbjct: 178 KITIRE 183
>gi|155372181|ref|NP_001094701.1| serine/arginine-rich splicing factor 4 [Bos taurus]
gi|154425888|gb|AAI51319.1| SFRS4 protein [Bos taurus]
gi|296490028|tpg|DAA32141.1| TPA: splicing factor, arginine/serine-rich 4 [Bos taurus]
Length = 493
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 100/168 (59%), Gaps = 10/168 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
+ G R+ VE A G RR S S Y SG + G R++YR++V L S SWQ
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
DLKD+MR+AG+V ++ + R G++++ SY DMK A+ KLD +E
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEKLDGTEV 165
>gi|410966619|ref|XP_003989828.1| PREDICTED: serine/arginine-rich splicing factor 4 [Felis catus]
Length = 499
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 100/168 (59%), Gaps = 10/168 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
+ G R+ VE A G RR S S Y SG + G R++YR++V L S SWQ
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
DLKD+MR+AG+V ++ + R G++++ SY DMK A+ KLD +E
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEKLDGTEV 165
>gi|395730870|ref|XP_003775801.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 4 [Pongo abelii]
Length = 492
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 100/168 (59%), Gaps = 10/168 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
+ G R+ VE A G RR S S Y SG + G R++YR++V L S SWQ
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
DLKD+MR+AG+V ++ + R G++++ SY DMK A+ KLD +E
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEKLDGTEV 165
>gi|402853658|ref|XP_003891508.1| PREDICTED: serine/arginine-rich splicing factor 4 [Papio anubis]
Length = 494
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 100/168 (59%), Gaps = 10/168 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
+ G R+ VE A G RR S S Y SG + G R++YR++V L S SWQ
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
DLKD+MR+AG+V ++ + R G++++ SY DMK A+ KLD +E
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEKLDGTEV 165
>gi|332245240|ref|XP_003271770.1| PREDICTED: uncharacterized protein LOC100597914 isoform 1 [Nomascus
leucogenys]
Length = 494
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 100/168 (59%), Gaps = 10/168 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
+ G R+ VE A G RR S S Y SG + G R++YR++V L S SWQ
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
DLKD+MR+AG+V ++ + R G++++ SY DMK A+ KLD +E
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEKLDGTEV 165
>gi|384939756|gb|AFI33483.1| serine/arginine-rich splicing factor 4 [Macaca mulatta]
Length = 494
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 100/168 (59%), Gaps = 10/168 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
+ G R+ VE A G RR S S Y SG + G R++YR++V L S SWQ
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
DLKD+MR+AG+V ++ + R G++++ SY DMK A+ KLD +E
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEKLDGTEV 165
>gi|386780975|ref|NP_001247807.1| serine/arginine-rich splicing factor 4 [Macaca mulatta]
gi|355745074|gb|EHH49699.1| hypothetical protein EGM_00406 [Macaca fascicularis]
gi|380787433|gb|AFE65592.1| serine/arginine-rich splicing factor 4 [Macaca mulatta]
gi|383408863|gb|AFH27645.1| serine/arginine-rich splicing factor 4 [Macaca mulatta]
Length = 494
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 100/168 (59%), Gaps = 10/168 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
+ G R+ VE A G RR S S Y SG + G R++YR++V L S SWQ
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
DLKD+MR+AG+V ++ + R G++++ SY DMK A+ KLD +E
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEKLDGTEV 165
>gi|325182716|emb|CCA17171.1| splicing factor putative [Albugo laibachii Nc14]
Length = 224
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 96/167 (57%), Gaps = 19/167 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VGNLP + ++ F K+G I I LK+P RPP +AF+E+E+ A++A+R +G
Sbjct: 4 IFVGNLPTEIDEETLQSHFSKHGQIACIRLKVPSRPPAFAFIEYEESSGADNAVRESNGI 63
Query: 69 NFDGYRLRVELAHGG---RRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQD 125
G ++RVE++ G R +SS R+ + YRV V+ L S SWQD
Sbjct: 64 ELLGSKIRVEISRSGPNQTRDTSSNKRFG-------------TQYRVTVSNLSSKISWQD 110
Query: 126 LKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
LKD RR GDV + V D G +G+ + +YD+M+ AIRKLDR +
Sbjct: 111 LKDFFRRGGDVVHTNV--DHSG-SGVGSFATYDEMERAIRKLDRVKL 154
>gi|119628064|gb|EAX07659.1| splicing factor, arginine/serine-rich 4, isoform CRA_c [Homo
sapiens]
Length = 464
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 100/168 (59%), Gaps = 10/168 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
+ G R+ VE A G RR S S Y SG + G R++YR++V L S SWQ
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
DLKD+MR+AG+V ++ + R G++++ SY DMK A+ KLD +E
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEKLDGTEV 165
>gi|119628063|gb|EAX07658.1| splicing factor, arginine/serine-rich 4, isoform CRA_b [Homo
sapiens]
gi|158256450|dbj|BAF84198.1| unnamed protein product [Homo sapiens]
Length = 494
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 100/168 (59%), Gaps = 10/168 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
+ G R+ VE A G RR S S Y SG + G R++YR++V L S SWQ
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
DLKD+MR+AG+V ++ + R G++++ SY DMK A+ KLD +E
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEKLDGTEV 165
>gi|395856813|ref|XP_003800813.1| PREDICTED: serine/arginine-rich splicing factor 4 [Otolemur
garnettii]
Length = 503
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 100/168 (59%), Gaps = 10/168 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
+ G R+ VE A G RR S S Y SG + G R++YR++V L S SWQ
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
DLKD+MR+AG+V ++ + R G++++ SY DMK A+ KLD +E
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEKLDGTEV 165
>gi|296213104|ref|XP_002753142.1| PREDICTED: serine/arginine-rich splicing factor 9, partial
[Callithrix jacchus]
Length = 167
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/137 (51%), Positives = 90/137 (65%), Gaps = 10/137 (7%)
Query: 48 AFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRR 107
AF+ FED RDAEDAI GR+GY++ RLRVE + R G + +RR
Sbjct: 1 AFVRFEDPRDAEDAIYGRNGYDYGQCRLRVEFPR------TYGGRGGWPRGGRNGPPTRR 54
Query: 108 SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKL 167
SD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D GM V+Y +DM+YA+RKL
Sbjct: 55 SDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDGVGM---VEYLRKEDMEYALRKL 111
Query: 168 DRSEFR-NAFSRSYVRV 183
D ++FR + SY+RV
Sbjct: 112 DDTKFRSHEGETSYIRV 128
>gi|21361282|ref|NP_005617.2| serine/arginine-rich splicing factor 4 [Homo sapiens]
gi|20981726|sp|Q08170.2|SRSF4_HUMAN RecName: Full=Serine/arginine-rich splicing factor 4; AltName:
Full=Pre-mRNA-splicing factor SRP75; AltName:
Full=SRP001LB; AltName: Full=Splicing factor,
arginine/serine-rich 4
gi|12803875|gb|AAH02781.1| Splicing factor, arginine/serine-rich 4 [Homo sapiens]
gi|30583669|gb|AAP36083.1| splicing factor, arginine/serine-rich 4 [Homo sapiens]
gi|60655747|gb|AAX32437.1| splicing factor arginine/serine-rich 4 [synthetic construct]
gi|123994341|gb|ABM84772.1| splicing factor, arginine/serine-rich 4 [synthetic construct]
Length = 494
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 100/168 (59%), Gaps = 10/168 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
+ G R+ VE A G RR S S Y SG + G R++YR++V L S SWQ
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
DLKD+MR+AG+V ++ + R G++++ SY DMK A+ KLD +E
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEKLDGTEV 165
>gi|30585347|gb|AAP36946.1| Homo sapiens splicing factor, arginine/serine-rich 4 [synthetic
construct]
gi|60652653|gb|AAX29021.1| splicing factor arginine/serine-rich 4 [synthetic construct]
Length = 495
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 100/168 (59%), Gaps = 10/168 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
+ G R+ VE A G RR S S Y SG + G R++YR++V L S SWQ
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
DLKD+MR+AG+V ++ + R G++++ SY DMK A+ KLD +E
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEKLDGTEV 165
>gi|114555162|ref|XP_001155042.1| PREDICTED: serine/arginine-rich splicing factor 4 isoform 5 [Pan
troglodytes]
gi|397515847|ref|XP_003828154.1| PREDICTED: serine/arginine-rich splicing factor 4 [Pan paniscus]
gi|261858864|dbj|BAI45954.1| splicing factor, arginine/serine-rich 4 [synthetic construct]
gi|410219650|gb|JAA07044.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
gi|410253776|gb|JAA14855.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
gi|410253778|gb|JAA14856.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
gi|410300938|gb|JAA29069.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
gi|410356834|gb|JAA44544.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
Length = 494
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 100/168 (59%), Gaps = 10/168 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
+ G R+ VE A G RR S S Y SG + G R++YR++V L S SWQ
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
DLKD+MR+AG+V ++ + R G++++ SY DMK A+ KLD +E
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEKLDGTEV 165
>gi|357511861|ref|XP_003626219.1| Arginine/serine-rich splicing factor [Medicago truncatula]
gi|355501234|gb|AES82437.1| Arginine/serine-rich splicing factor [Medicago truncatula]
Length = 168
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/68 (85%), Positives = 64/68 (94%), Gaps = 1/68 (1%)
Query: 130 MRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSR 189
MRRAGDVCFSQVFRDRGGMTGIV+YT+Y+DMKYAIRKLD SEFRNAFS +Y+RVREYD R
Sbjct: 1 MRRAGDVCFSQVFRDRGGMTGIVEYTNYEDMKYAIRKLDDSEFRNAFSWAYIRVREYD-R 59
Query: 190 RSYSRSPS 197
R Y+RSPS
Sbjct: 60 RRYTRSPS 67
>gi|344295340|ref|XP_003419370.1| PREDICTED: serine/arginine-rich splicing factor 9-like, partial
[Loxodonta africana]
Length = 174
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/138 (49%), Positives = 89/138 (64%), Gaps = 10/138 (7%)
Query: 47 YAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSR 106
+AF+ FE RDAEDAI GR+GY++ RLRVE + +R
Sbjct: 7 FAFVRFETPRDAEDAIYGRNGYDYGQCRLRVEFPRAYGGRGGWPRGGRNGPP------TR 60
Query: 107 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 166
RSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D GM G+V+Y +DM+YA+RK
Sbjct: 61 RSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKD--GM-GMVEYLRKEDMEYALRK 117
Query: 167 LDRSEFR-NAFSRSYVRV 183
LD ++FR + SY+RV
Sbjct: 118 LDDTKFRSHEGETSYIRV 135
>gi|328770953|gb|EGF80994.1| hypothetical protein BATDEDRAFT_36927 [Batrachochytrium
dendrobatidis JAM81]
Length = 246
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 102/252 (40%), Positives = 132/252 (52%), Gaps = 26/252 (10%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G LP D REVE L ++G I D+ G+AF+E+ D RDA D +R DG
Sbjct: 8 VYIGRLPRDITEREVERLAREFGRIRDVRCL-----NGFAFVEYSDSRDARDCVRELDGS 62
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
+D RL V+ A G S DR +S S RR DY ++V GLP+ SWQDLKD
Sbjct: 63 RYDRERLSVQPAKSG---SDRRDRPASSSL-------RRGDYGIVVQGLPARTSWQDLKD 112
Query: 129 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAF----SRSYVRVR 184
R+ GDV F+ + D G GIV++TS D AI + D++EF+ A R +
Sbjct: 113 LFRKVGDVIFTNI--DNSG-DGIVEFTSETDKNSAIEQFDKTEFQGAVISVKDRDAANGK 169
Query: 185 EYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSP-RSRSYSPRGKYS---RR 240
+ D+RRS R S S R SP RS SP R S SP R RS SPR S RR
Sbjct: 170 DSDARRSPDRRGSPGRRSSPGRRSSPRRDRSVSPRRDRSVSPRRDRSVSPRRDRSVSPRR 229
Query: 241 SPSLSPARSASQ 252
S++P R S+
Sbjct: 230 DRSITPPRHHSE 241
>gi|351695941|gb|EHA98859.1| Splicing factor, arginine/serine-rich 4 [Heterocephalus glaber]
Length = 489
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 100/168 (59%), Gaps = 10/168 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
+ G R+ VE A G RR S S Y SG + G R++YR++V L S SWQ
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
DLKD+MR+AG+V ++ + R G++++ SY DMK A+ KLD +E
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEKLDGTEV 165
>gi|255936927|ref|XP_002559490.1| Pc13g10700 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584110|emb|CAP92139.1| Pc13g10700 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 301
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/248 (35%), Positives = 129/248 (52%), Gaps = 32/248 (12%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP + ++E+ F +G I +I L G+ F+E++D DA
Sbjct: 1 MTEVSSTRLYLGNLPRNVTKSDIEEHFSSHGSGKITEIKLMN-----GFGFIEYDDQLDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLP 118
D + DG F G RL V+ A G RR + + S + RR+ +R+ ++GLP
Sbjct: 56 RDIVP--DGSEFKGERLTVQFARGPRRKEA----FPGPSERNALPRPRRTIFRMQISGLP 109
Query: 119 SSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFS 177
+ SWQDLKD R++G DV +S+ R++G G V++ + +D+K A+ KLD+ EF+ +
Sbjct: 110 ET-SWQDLKDFARQSGLDVVYSETGREQG--RGFVEFETANDLKTAVEKLDQREFKGSVV 166
Query: 178 RSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYS---PRSRSYSPR 234
++ ++ R P R PY SRS R PY P Y P R YSPR
Sbjct: 167 SCVADIQSFEER------PMRDPYRSRSPPRRPY------PVTMDEYDRRIPPPRGYSPR 214
Query: 235 GKYSRRSP 242
Y RSP
Sbjct: 215 EHYRERSP 222
>gi|403293287|ref|XP_003937651.1| PREDICTED: serine/arginine-rich splicing factor 4 [Saimiri
boliviensis boliviensis]
Length = 500
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 100/168 (59%), Gaps = 10/168 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
+ G R+ VE A G RR S S Y SG + G R++YR++V L S SWQ
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
DLKD+MR+AG+V ++ + R G++++ SY DMK A+ KLD +E
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEKLDGTEV 165
>gi|242011682|ref|XP_002426576.1| Splicing factor, arginine/serine-rich, putative [Pediculus humanus
corporis]
gi|212510716|gb|EEB13838.1| Splicing factor, arginine/serine-rich, putative [Pediculus humanus
corporis]
Length = 176
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/130 (53%), Positives = 86/130 (66%), Gaps = 9/130 (6%)
Query: 62 IRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV-----SRRSDYRVLVTG 116
+ RDGY++DGYRLRVE GG S +R S G G +RRS +RVLVTG
Sbjct: 1 VHARDGYDYDGYRLRVEFPRGGGPGSYRGNRSGGSSGGDRGGGRRGPPARRSQFRVLVTG 60
Query: 117 LPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NA 175
LP S SWQDLKDHMR AGDVCF+ VF+D TG+V++ +DMKYA++KLD S FR +
Sbjct: 61 LPPSGSWQDLKDHMREAGDVCFADVFKD---GTGVVEFLRLEDMKYAVKKLDDSRFRSHE 117
Query: 176 FSRSYVRVRE 185
SYVRV+E
Sbjct: 118 GEVSYVRVKE 127
>gi|296207272|ref|XP_002750572.1| PREDICTED: serine/arginine-rich splicing factor 4 [Callithrix
jacchus]
Length = 500
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 100/168 (59%), Gaps = 10/168 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
+ G R+ VE A G RR S S Y SG + G R++YR++V L S SWQ
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
DLKD+MR+AG+V ++ + R G++++ SY DMK A+ KLD +E
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEKLDGTEV 165
>gi|307438|gb|AAA36649.1| pre-mRNA splicing factor [Homo sapiens]
Length = 494
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 100/168 (59%), Gaps = 10/168 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
+ G R+ VE A G RR S S Y SG + G R++YR++V L S SWQ
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
DLKD+MR+AG+V ++ + R G++++ SY DMK A+ KLD +E
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEKLDGTEV 165
>gi|431891168|gb|ELK02045.1| Splicing factor, arginine/serine-rich 4 [Pteropus alecto]
Length = 500
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 100/168 (59%), Gaps = 10/168 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
+ G R+ VE A G RR S S Y SG + G R++YR++V L S SWQ
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
DLKD+MR+AG+V ++ + R G++++ SY DMK A+ KLD +E
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEKLDGTEV 165
>gi|62898449|dbj|BAD97164.1| splicing factor, arginine/serine-rich 4 variant [Homo sapiens]
Length = 382
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 100/168 (59%), Gaps = 10/168 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
+ G R+ VE A G RR S S Y SG + G R++YR++V L S SWQ
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
DLKD+MR+AG+V ++ + R G++++ SY DMK A+ KLD +E
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEKLDGTEV 165
>gi|341902095|gb|EGT58030.1| CBN-RSP-3 protein [Caenorhabditis brenneri]
Length = 275
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 104/178 (58%), Gaps = 10/178 (5%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M LYVGN+P D ++ DLF YG ++ +D+K + +AF+ + D+RDA+D
Sbjct: 1 MPQEDEAKLYVGNIPEDATKEDIYDLFETYGRVLYVDIK-NGKISRFAFVAYRDFRDADD 59
Query: 61 AIRGRDGYNFDGYRLRVELAHG------GRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLV 114
A+ D +++ G LRVE + G G + SS++ + + G G RRSD+RV V
Sbjct: 60 AVNYLDKFDYHGRSLRVEHSTGVGPRGWGGQPLSSINGDNFRIARGPGGPQRRSDFRVFV 119
Query: 115 TGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
G+P + SWQDLKDH R AG++CF+ + ++ TGIV++ ++ +I D++EF
Sbjct: 120 EGIPQTGSWQDLKDHFRPAGEICFAMISHNK---TGIVEFEKKSSVQRSIDIFDKTEF 174
>gi|403221223|dbj|BAM39356.1| splicing factor [Theileria orientalis strain Shintoku]
Length = 334
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 94/175 (53%), Gaps = 18/175 (10%)
Query: 2 SSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRP--PGYAFLEFEDYRDAE 59
++RS ++VGNLP R++ DLF K+G I DID+K YAF++F R AE
Sbjct: 8 ANRSPSCVFVGNLPEKVDNRDIHDLFDKFGEIKDIDIKHGKTTNYTSYAFIDFASVRSAE 67
Query: 60 DAIRGRDGYNFDGYRLRVELAHGG--RRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGL 117
DA+ RDGY +D Y+LRVE A G R+H + + ++++ L
Sbjct: 68 DAVDSRDGYEYDRYKLRVEFAGEGKPRKHDDDRRDRDRHRTDYR----------LVISNL 117
Query: 118 PSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
P WQ LKDHMR+AG V + + + G VD+ DMKYA+RK+D SE
Sbjct: 118 PHGCRWQHLKDHMRKAGPVGYVNISHGK----GYVDFIHKSDMKYALRKMDGSEL 168
>gi|348683415|gb|EGZ23230.1| hypothetical protein PHYSODRAFT_556082 [Phytophthora sojae]
Length = 222
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 101/180 (56%), Gaps = 23/180 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VGNLP D R R++ D F ++G I + +K P RPP +AF+ +++ DA DA+R G
Sbjct: 4 VFVGNLPEDVRERDLSDKFERFGRISSVRIKFPTRPPPFAFIAYDNEEDASDAVRSMHGA 63
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
G RLRVE++ G RG + YRV ++GLP++ SWQDLKD
Sbjct: 64 MLSGCRLRVEMSRG------------LVDDARPRG----TQYRVKISGLPATMSWQDLKD 107
Query: 129 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDS 188
+R+ GDV S V DR G G + + D+M+ AIR+LD ++ VRVRE D+
Sbjct: 108 FLRKGGDVVHSDV--DRRG-NGTASFATSDEMRRAIRQLDGTDLDG----ERVRVREEDA 160
>gi|116175257|ref|NP_001070684.1| serine/arginine-rich splicing factor 4 [Sus scrofa]
gi|115371753|gb|ABI96201.1| SFRS4 [Sus scrofa]
Length = 491
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 100/168 (59%), Gaps = 10/168 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
+ G R+ VE A G RR S S Y SG + G R++YR++V L S SWQ
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
DLKD+MR+AG+V ++ + R G++++ SY DMK A+ KLD +E
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEKLDGTEV 165
>gi|241159531|ref|XP_002408582.1| alternative splicing factor ASF/SF2, putative [Ixodes scapularis]
gi|215494365|gb|EEC04006.1| alternative splicing factor ASF/SF2, putative [Ixodes scapularis]
Length = 339
Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 97/164 (59%), Gaps = 8/164 (4%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VG L D R R++E F YG I ++ LK GY F+EF+DYRDAEDA+ +G
Sbjct: 5 VFVGRLNYDVRERDLEKFFKGYGRIGEVLLK-----NGYGFVEFDDYRDAEDAVHDLNGK 59
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
G R+ VELA G RR + Y SS G R++Y++LV L SS SWQDLKD
Sbjct: 60 KLMGERISVELARGIRRGPGTG--YGGASSSRRYGPPSRTEYQLLVENLSSSVSWQDLKD 117
Query: 129 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
MR+AG+V ++ + R G+V++ +Y DMK A+ KL+ +
Sbjct: 118 FMRQAGEVTYTDAHKLRRN-EGVVEFATYSDMKNALIKLNHMDL 160
>gi|325186279|emb|CCA20785.1| splicing factor putative [Albugo laibachii Nc14]
Length = 275
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 95/159 (59%), Gaps = 12/159 (7%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VGNLP + E+E F ++G IV++ LK P RPP +AF+E+ED RDAEDA++ G
Sbjct: 27 IFVGNLPQEISEPELEKTFGEFGKIVNVILKFPRRPPPFAFIEYEDLRDAEDAVQQMHGK 86
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
G +RVE++ G + +S +++ G + +RV ++ +P S SWQDLKD
Sbjct: 87 ELHGAEIRVEISRNGPK-ASRDEKFGGRHHG--------TQFRVELSNIPRSVSWQDLKD 137
Query: 129 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKL 167
+R G V + V DR G G+ +T+ +M+ AIRKL
Sbjct: 138 FLRIGGVVVHADV--DRRG-NGVASFTNQQEMERAIRKL 173
>gi|403224084|dbj|BAM42214.1| splicing factor [Theileria orientalis strain Shintoku]
Length = 259
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 98/167 (58%), Gaps = 14/167 (8%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+GNLP D +E+E+ F K+G I+ DLK +AF+EF D RDA DAIR +DG+
Sbjct: 9 IYIGNLPSDCSQKELEEEFEKFGRILYCDLKRSYTGSSFAFIEFSDSRDARDAIRDKDGF 68
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVS-RRSDYRVLVTGLPSSASWQDLK 127
F G +LRVEL R +SGGSR RR Y + VTGLP S SWQDLK
Sbjct: 69 EFHGKKLRVELPF----------RERDQASGGSRRHGPRRGKYVLEVTGLPPSGSWQDLK 118
Query: 128 DHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRN 174
DHMR AG + VFR G G + + S DM+YAI K D S F++
Sbjct: 119 DHMRDAGHCGHADVFR---GGVGEISFFSRSDMEYAIEKYDGSTFKS 162
>gi|344287504|ref|XP_003415493.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Loxodonta
africana]
Length = 500
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 100/168 (59%), Gaps = 10/168 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
+ G R+ VE A G RR S S Y SG + G R++YR++V L S SWQ
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
DLKD+MR+AG+V ++ + R G++++ SY DMK A+ KLD +E
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKN-EGVIEFLSYSDMKRALEKLDGTEV 165
>gi|317143798|ref|XP_003189536.1| pre-RNA splicing factor Srp2 [Aspergillus oryzae RIB40]
Length = 299
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/255 (36%), Positives = 128/255 (50%), Gaps = 46/255 (18%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP + +++E+ F +G I +I L G+ F+E+ED DA
Sbjct: 1 MTEVSSTRLYLGNLPRNVTKQDIEEHFSTHGSGKITEIKLMN-----GFGFIEYEDAMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSS---SMDRYSSYSSGGSRGVSRRSDYRVLVT 115
D + G +F G RL V+ A G RR + MDR + RR+ YR++V+
Sbjct: 56 RDVVPAFHGSDFKGERLTVQFARGPRRKENFPGPMDRPNMPR-------PRRTVYRMMVS 108
Query: 116 GLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRN 174
GLP + SWQDLKD R AG DV +S+ R+ G G V++ + +D+K AI KLD +F+
Sbjct: 109 GLPET-SWQDLKDFARGAGLDVVYSETGREPG--RGFVEFETANDLKTAIEKLDGRDFKG 165
Query: 175 AFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYS-------PR 227
+ ++ D R P R PY RSRSP RS+ P
Sbjct: 166 SRVSCVADIQPVDER------PFRDPY------------RSRSPRRSYPPVDEYDRRFPP 207
Query: 228 SRSYSPRGKYSRRSP 242
R YSPR Y RSP
Sbjct: 208 PRGYSPRAHYRERSP 222
>gi|238487096|ref|XP_002374786.1| pre-RNA splicing factor Srp2, putative [Aspergillus flavus
NRRL3357]
gi|317143800|ref|XP_001819713.2| pre-RNA splicing factor Srp2 [Aspergillus oryzae RIB40]
gi|220699665|gb|EED56004.1| pre-RNA splicing factor Srp2, putative [Aspergillus flavus
NRRL3357]
Length = 300
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/249 (37%), Positives = 129/249 (51%), Gaps = 34/249 (13%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP + +++E+ F +G I +I L G+ F+E+ED DA
Sbjct: 1 MTEVSSTRLYLGNLPRNVTKQDIEEHFSTHGSGKITEIKLMN-----GFGFIEYEDAMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSS---SMDRYSSYSSGGSRGVSRRSDYRVLVT 115
D + G +F G RL V+ A G RR + MDR + RR+ YR++V+
Sbjct: 56 RDVVPAFHGSDFKGERLTVQFARGPRRKENFPGPMDRPNMPR-------PRRTVYRMMVS 108
Query: 116 GLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRN 174
GLP + SWQDLKD R AG DV +S+ R+ G G V++ + +D+K AI KLD +F+
Sbjct: 109 GLPET-SWQDLKDFARGAGLDVVYSETGREPG--RGFVEFETANDLKTAIEKLDGRDFKG 165
Query: 175 AFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYS-PRSRSYSP 233
+ ++ D R P R PY RSRSP RS P + P R YSP
Sbjct: 166 SRVSCVADIQPVDER------PFRDPY----RSRSP--RRSYPPVDEYDRRFPPPRGYSP 213
Query: 234 RGKYSRRSP 242
R Y RSP
Sbjct: 214 RAHYRERSP 222
>gi|354497469|ref|XP_003510842.1| PREDICTED: serine/arginine-rich splicing factor 9-like, partial
[Cricetulus griseus]
Length = 201
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/131 (51%), Positives = 89/131 (67%), Gaps = 16/131 (12%)
Query: 57 DAEDAIRGRDGYNFDGYRLRVEL--AHGGRRHSSSMDRYSSYSSGGSRGV-SRRSDYRVL 113
DAEDAI GR+GY++ RLRVE +GGR + + G G +RRSD+RVL
Sbjct: 44 DAEDAIYGRNGYDYGQCRLRVEFPRTYGGR---------AGWPRGARNGPPTRRSDFRVL 94
Query: 114 VTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
V+GLP S SWQDLKDHMR AGDVC++ V +D GM G+V+Y +DM+YA+RKLD ++FR
Sbjct: 95 VSGLPPSGSWQDLKDHMREAGDVCYADVQKD--GM-GMVEYLRKEDMEYALRKLDDTKFR 151
Query: 174 -NAFSRSYVRV 183
+ SY+RV
Sbjct: 152 SHEGETSYIRV 162
>gi|325302612|tpg|DAA34674.1| TPA_inf: alternative splicing factor SRp55/B52/SRp75 [Amblyomma
variegatum]
Length = 281
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 103/180 (57%), Gaps = 24/180 (13%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G+L R R+V+ F YG + DI LK G+ F+EFED+RDA+DAI+ +G
Sbjct: 5 VFIGHLSYQVRERDVDRFFKGYGRVGDIHLK-----NGFGFVEFEDHRDADDAIKDLNGK 59
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSS-------GGSR---------GVSRRSDYRV 112
G R+ VELAHG RR R + S GG R G R++Y++
Sbjct: 60 ELLGERVSVELAHGSRRGPGG--RIVAPGSRDWRSPPGGGRFNAPRESRFGPPVRTNYQL 117
Query: 113 LVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
+V L S SWQDLKD+MR+AG+V F+ +R GIV++++Y DM+ A+ KLD ++
Sbjct: 118 VVENLSSHVSWQDLKDYMRQAGEVTFTDAHSNRPNQ-GIVEFSNYADMRNALNKLDNTDL 176
>gi|317036141|ref|XP_001397700.2| pre-RNA splicing factor Srp2 [Aspergillus niger CBS 513.88]
gi|358368362|dbj|GAA84979.1| pre-RNA splicing factor Srp2 [Aspergillus kawachii IFO 4308]
Length = 301
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/249 (36%), Positives = 130/249 (52%), Gaps = 33/249 (13%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP + +++E+ F +G I +I L G+ F+E+ED DA
Sbjct: 1 MTEVSSTRLYLGNLPRNVTKQDIEEHFSTHGSGKITEIKLMN-----GFGFIEYEDAMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSS---SMDRYSSYSSGGSRGVSRRSDYRVLVT 115
D + G +F G RL V+ A G RR + MDR + RR+ +R++V+
Sbjct: 56 RDVVPAFHGSDFKGERLTVQFARGPRRKENFPGPMDRPNMPR-------PRRTIFRMMVS 108
Query: 116 GLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRN 174
GLP + SWQDLKD R++G DV +S+ R+ G G V++ + +D+K AI KLD EF+
Sbjct: 109 GLPET-SWQDLKDFARQSGLDVVYSETGRELG--RGFVEFETANDLKTAIEKLDGREFKG 165
Query: 175 AFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYS-PRSRSYSP 233
+ ++ Y R+ R PY RSRSP RS P + P R YSP
Sbjct: 166 SRVTCIADIQTYPDERAI-----RDPY----RSRSP--RRSYPPMDEYDRRFPAPRGYSP 214
Query: 234 RGKYSRRSP 242
R Y RSP
Sbjct: 215 RAHYRERSP 223
>gi|67537616|ref|XP_662582.1| hypothetical protein AN4978.2 [Aspergillus nidulans FGSC A4]
gi|40741866|gb|EAA61056.1| hypothetical protein AN4978.2 [Aspergillus nidulans FGSC A4]
gi|259482149|tpe|CBF76354.1| TPA: pre-RNA splicing factor Srp2, putative (AFU_orthologue;
AFUA_3G10100) [Aspergillus nidulans FGSC A4]
Length = 296
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/245 (35%), Positives = 128/245 (52%), Gaps = 26/245 (10%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP + +++E+ F +G I +I L G+ F+E+ED DA
Sbjct: 1 MTEVSSTRLYLGNLPRNVTKQDIEEHFSTHGTGKITEIKLMN-----GFGFIEYEDAMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLP 118
D + G +F G RL V+ A G RR + + + + RR+ +R++++GLP
Sbjct: 56 RDIVPAFHGSDFKGERLTVQFARGPRRKEN----FPVPTDRPNLPRPRRTIFRMIISGLP 111
Query: 119 SSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFS 177
+ SWQDLKD R++G DV +S+ R+ G GIV++ + +D+K A+ KLD EF+
Sbjct: 112 ET-SWQDLKDFARQSGLDVVYSETGREPG--RGIVEFETANDLKTAVEKLDGREFKGTRV 168
Query: 178 RSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYSPRGKY 237
++ YD R P R PY SRS R Y R +S R YSPR Y
Sbjct: 169 TCVPDIQPYDDR------PYRDPYRSRSPRRG--YPPMDEYDRRYSV---PRGYSPRSHY 217
Query: 238 SRRSP 242
RSP
Sbjct: 218 RERSP 222
>gi|325189186|emb|CCA23709.1| splicing factor putative [Albugo laibachii Nc14]
Length = 233
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 95/159 (59%), Gaps = 12/159 (7%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VGNLP + E+E F ++G IV++ LK P RPP +AF+E+ED RDAEDA++ G
Sbjct: 27 IFVGNLPQEISEPELEKTFGEFGKIVNVILKFPRRPPPFAFIEYEDLRDAEDAVQQMHGK 86
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
G +RVE++ G + +S +++ G + +RV ++ +P S SWQDLKD
Sbjct: 87 ELHGAEIRVEISRNGPK-ASRDEKFGGRHHG--------TQFRVELSNIPRSVSWQDLKD 137
Query: 129 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKL 167
+R G V + V DR G G+ +T+ +M+ AIRKL
Sbjct: 138 FLRIGGVVVHADV--DRRG-NGVASFTNQQEMERAIRKL 173
>gi|346468507|gb|AEO34098.1| hypothetical protein [Amblyomma maculatum]
Length = 280
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 101/181 (55%), Gaps = 28/181 (15%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G+L R R+V+ F YG + DI LK G+ F+EFED+RDA+DAI+ +G
Sbjct: 5 VFIGHLSYQVRERDVDRFFKGYGRVGDIHLK-----NGFGFVEFEDHRDADDAIKDLNGK 59
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR-----------------GVSRRSDYR 111
G R+ VELAHG RR + GSR G R++Y+
Sbjct: 60 ELLGERVSVELAHGSRRGPG-----GRIVAPGSRDWRSPPGRFNAPRESRFGPPVRTNYQ 114
Query: 112 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSE 171
++V L S SWQDLKD+MR+AG+V F+ +R GIV++++Y DM+ A+ KLD ++
Sbjct: 115 LIVENLSSHVSWQDLKDYMRQAGEVTFTDAHSNRPNQ-GIVEFSNYADMRNALNKLDNTD 173
Query: 172 F 172
Sbjct: 174 L 174
>gi|427777529|gb|JAA54216.1| Putative alternative splicing factor asf/sf2 [Rhipicephalus
pulchellus]
Length = 308
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 95/162 (58%), Gaps = 15/162 (9%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VG L D R R++E F YG I DI LK G+ F++ DYRDAEDA+R +G
Sbjct: 5 VFVGRLNYDVRERDLERFFRGYGRIEDIVLK-----NGFGFVDISDYRDAEDAVRDLNGK 59
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR--GVSRRSDYRVLVTGLPSSASWQDL 126
G R+ VELA G RR DR G R G R++Y++LV L +S SWQDL
Sbjct: 60 RLMGERVTVELARGMRRGPPDYDR-------GPRRFGPPTRTNYQLLVENLSTSVSWQDL 112
Query: 127 KDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLD 168
KD MR+AGDV ++ + R G+V++ SY DMK A+R LD
Sbjct: 113 KDFMRQAGDVTYTDAHKLR-RHQGVVEFASYSDMKNALRSLD 153
>gi|47575808|ref|NP_001001248.1| arginine/serine-rich splicing factor 4 isoform 1 [Xenopus
(Silurana) tropicalis]
gi|45872604|gb|AAH68213.1| splicing factor, arginine/serine-rich 6 [Xenopus (Silurana)
tropicalis]
Length = 568
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 100/170 (58%), Gaps = 12/170 (7%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R ++++ F YG ++++DLK GY F+EFED RDA+DA+ +G
Sbjct: 4 VYIGRLGYHVREKDIQRFFGGYGKLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSS-----SMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSAS 122
+ G R+ VE A G RR S Y + SG + G R+++R++V L S S
Sbjct: 59 DLCGERVIVEHARGPRRDRDGYGYGSRSGYRNQRSGRDKYGPPVRTEFRLIVENLSSRCS 118
Query: 123 WQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
WQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ KLD +E
Sbjct: 119 WQDLKDFMRQAGEVTYADAHKERAN-EGVIEFRSYSDMKRAMEKLDGTEI 167
>gi|134083249|emb|CAK46820.1| unnamed protein product [Aspergillus niger]
Length = 367
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/249 (36%), Positives = 131/249 (52%), Gaps = 35/249 (14%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP + +++E+ F +G I +I L G+ F+E+ED DA
Sbjct: 1 MTEVSSTRLYLGNLPRNVTKQDIEEHFSTHGSGKITEIKLMN-----GFGFIEYEDAMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSS---SMDRYSSYSSGGSRGVSRRSDYRVLVT 115
D + DG +F G RL V+ A G RR + MDR + RR+ +R++V+
Sbjct: 56 RDVVP--DGSDFKGERLTVQFARGPRRKENFPGPMDR-------PNMPRPRRTIFRMMVS 106
Query: 116 GLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRN 174
GLP + SWQDLKD R++G DV +S+ R+ G G V++ + +D+K AI KLD EF+
Sbjct: 107 GLPET-SWQDLKDFARQSGLDVVYSETGRELG--RGFVEFETANDLKTAIEKLDGREFKG 163
Query: 175 AFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYS-PRSRSYSP 233
+ ++ Y R+ R PY RSRSP RS P + P R YSP
Sbjct: 164 SRVTCIADIQTYPDERAI-----RDPY----RSRSP--RRSYPPMDEYDRRFPAPRGYSP 212
Query: 234 RGKYSRRSP 242
R Y RSP
Sbjct: 213 RAHYRERSP 221
>gi|83767572|dbj|BAE57711.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391867601|gb|EIT76847.1| alternative splicing factor SRp55/B52/SRp75 [Aspergillus oryzae
3.042]
Length = 298
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/249 (37%), Positives = 130/249 (52%), Gaps = 36/249 (14%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP + +++E+ F +G I +I L G+ F+E+ED DA
Sbjct: 1 MTEVSSTRLYLGNLPRNVTKQDIEEHFSTHGSGKITEIKLMN-----GFGFIEYEDAMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSS---SMDRYSSYSSGGSRGVSRRSDYRVLVT 115
D + DG +F G RL V+ A G RR + MDR + RR+ YR++V+
Sbjct: 56 RDVVP--DGSDFKGERLTVQFARGPRRKENFPGPMDRPNMPRP-------RRTVYRMMVS 106
Query: 116 GLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRN 174
GLP + SWQDLKD R AG DV +S+ R+ G G V++ + +D+K AI KLD +F+
Sbjct: 107 GLPET-SWQDLKDFARGAGLDVVYSETGREPG--RGFVEFETANDLKTAIEKLDGRDFKG 163
Query: 175 AFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYS-PRSRSYSP 233
+ ++ D R P R PY RSRSP RS P + P R YSP
Sbjct: 164 SRVSCVADIQPVDER------PFRDPY----RSRSP--RRSYPPVDEYDRRFPPPRGYSP 211
Query: 234 RGKYSRRSP 242
R Y RSP
Sbjct: 212 RAHYRERSP 220
>gi|320168404|gb|EFW45303.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 239
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 95/161 (59%), Gaps = 13/161 (8%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
LYVG + D R R+VE LF KYG D+ LK G+ F+EF+D RDA+DA+R G
Sbjct: 4 LYVGRVSADARERDVEHLFGKYGRTRDVTLK-----NGFGFVEFDDVRDADDAMRDLHGR 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
+F G RL VE A+ G R R ++ R+ YRVLV L + SWQDLKD
Sbjct: 59 DFMGDRLIVERANSGGRRDRGEPRERRFAP------PTRTQYRVLVENLSTRISWQDLKD 112
Query: 129 HMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLD 168
+R G +V F+ R+R G TG+V++ + DM++AIR+LD
Sbjct: 113 FVRTCGVEVTFADAHRERDG-TGVVEFANSTDMRHAIRRLD 152
>gi|326482144|gb|EGE06154.1| pre-mRNA splicing factor [Trichophyton equinum CBS 127.97]
Length = 304
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/245 (35%), Positives = 126/245 (51%), Gaps = 24/245 (9%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLF--YKYGPIVDIDLKIPPRPPGYAFLEFEDYRDA 58
MS SS LY+GNLP + +++E+ F + G I +I L G+ F+E+ED DA
Sbjct: 1 MSEVSSTRLYLGNLPRNVNKQDIEEHFGSHGTGKITEIKLMQ-----GFGFIEYEDAMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLP 118
+D + G +F G RL V+ A G RR + + RR+ YR+ +TGLP
Sbjct: 56 KDVVPAFHGTDFKGERLTVQFARGPRRREP----FPGPPERSAAPRPRRTIYRMQITGLP 111
Query: 119 SSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFS 177
+ SWQDLKD R++G DV +S+ RDR G G V++ + +D++ A+ KLD ++F+ +
Sbjct: 112 ET-SWQDLKDFARQSGLDVVYSET-RDRDG-KGFVEFENGNDLRTAVEKLDGTDFKGSRV 168
Query: 178 RSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYSPRGKY 237
++ R R PY SRS R P Y P + R YSPRG Y
Sbjct: 169 TCTADIQPPMEDRV-----PRDPYRSRSPRRGPPY----PPVDEYDRRGPPRGYSPRGHY 219
Query: 238 SRRSP 242
RSP
Sbjct: 220 RERSP 224
>gi|350633625|gb|EHA21990.1| hypothetical protein ASPNIDRAFT_56436 [Aspergillus niger ATCC 1015]
Length = 299
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 92/249 (36%), Positives = 131/249 (52%), Gaps = 35/249 (14%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP + +++E+ F +G I +I L G+ F+E+ED DA
Sbjct: 1 MTEVSSTRLYLGNLPRNVTKQDIEEHFSTHGSGKITEIKLMN-----GFGFIEYEDAMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSS---SMDRYSSYSSGGSRGVSRRSDYRVLVT 115
D + DG +F G RL V+ A G RR + MDR + RR+ +R++V+
Sbjct: 56 RDVVP--DGSDFKGERLTVQFARGPRRKENFPGPMDRPNMPRP-------RRTIFRMMVS 106
Query: 116 GLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRN 174
GLP + SWQDLKD R++G DV +S+ R+ G G V++ + +D+K AI KLD EF+
Sbjct: 107 GLPET-SWQDLKDFARQSGLDVVYSETGRELG--RGFVEFETANDLKTAIEKLDGREFKG 163
Query: 175 AFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYS-PRSRSYSP 233
+ ++ Y R+ R PY RSRSP RS P + P R YSP
Sbjct: 164 SRVTCIADIQTYPDERAI-----RDPY----RSRSP--RRSYPPMDEYDRRFPAPRGYSP 212
Query: 234 RGKYSRRSP 242
R Y RSP
Sbjct: 213 RAHYRERSP 221
>gi|355778262|gb|EHH63298.1| Adapter-related protein complex 3 subunit beta-2 [Macaca
fascicularis]
Length = 1156
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 101/193 (52%), Gaps = 47/193 (24%)
Query: 8 TLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDG 67
+YV LP D R +++ED FYKY I +I+LK +AF+ FED RDAEDAI GR+G
Sbjct: 7 CIYVVGLPTDVREKDLEDFFYKYDRIHEIELKNWHGLVPFAFVHFEDPRDAEDAIYGRNG 66
Query: 68 YNFDGYRLRVEL--AHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQD 125
Y++ RLRVE +GGR SWQD
Sbjct: 67 YDYGQCRLRVEFPRTYGGR------------------------------------GSWQD 90
Query: 126 LKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSR-SYVRVR 184
LKDHMR DVC++ V +D GM V+Y DM+YA+RKLD +F + S SY+RV
Sbjct: 91 LKDHMRAVWDVCYAHVQKDGVGM---VEYLRKADMEYALRKLDDIKFCSHDSETSYIRV- 146
Query: 185 EYDSRRS---YSR 194
Y RR+ YSR
Sbjct: 147 -YPERRTSYGYSR 158
>gi|440907568|gb|ELR57702.1| Serine/arginine-rich splicing factor 4, partial [Bos grunniens
mutus]
Length = 488
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 97/165 (58%), Gaps = 10/165 (6%)
Query: 12 GNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFD 71
G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G +
Sbjct: 1 GRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGKDLC 55
Query: 72 GYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQDLK 127
G R+ VE A G RR S S Y SG + G R++YR++V L S SWQDLK
Sbjct: 56 GERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLK 115
Query: 128 DHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
D+MR+AG+V ++ + R G++++ SY DMK A+ KLD +E
Sbjct: 116 DYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEKLDGTEV 159
>gi|147904116|ref|NP_001079647.1| serine/arginine-rich splicing factor 6 [Xenopus laevis]
gi|28436899|gb|AAH46668.1| MGC52985 protein [Xenopus laevis]
Length = 667
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 100/170 (58%), Gaps = 12/170 (7%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R ++++ F YG +++IDLK GY F+EFED RDA+DA+ +G
Sbjct: 4 VYIGRLGYHVREKDLQRFFGGYGKLLEIDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSS-----SMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSAS 122
+ G R+ +E A G RR S Y + +G + G R+++R++V L S S
Sbjct: 59 DLCGERVIIEHARGPRRDRDGYGYGSRSGYRNQRTGRDKYGPPVRTEFRLVVENLSSRCS 118
Query: 123 WQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
WQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ KLD +E
Sbjct: 119 WQDLKDFMRQAGEVTYADAHKERAN-EGVIEFRSYSDMKRAVEKLDGTEI 167
>gi|2914669|gb|AAC04476.1| SRP0001LB [Homo sapiens]
Length = 192
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 100/168 (59%), Gaps = 10/168 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
+ G R+ VE A G RR S S Y SG + G R++YR++V L S SWQ
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
DLKD+MR+AG+V ++ + R G++++ SY DMK A+ KLD +E
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEKLDGTEV 165
>gi|119614896|gb|EAW94490.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_e [Homo sapiens]
Length = 142
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/120 (55%), Positives = 80/120 (66%), Gaps = 2/120 (1%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
++DGYRLRVE GR + R SRRS+ RV+V+GLP S SWQDL
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137
>gi|148224986|ref|NP_001080148.1| splicing factor, arginine/serine-rich 6 [Xenopus laevis]
gi|28422195|gb|AAH44265.1| B52-prov protein [Xenopus laevis]
Length = 660
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 102/181 (56%), Gaps = 28/181 (15%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG L R ++++ F YG ++++DLK GY F+EFED RDA+DA+ +G
Sbjct: 4 VYVGRLGYHVREKDIQRFFGSYGKLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDR----YSSYSSGGSRGVSR-------------RSDYR 111
+ G R+ VE A G RR DR Y S S GS G R R+++R
Sbjct: 59 DLCGERVIVEHARGPRR-----DRDGYGYGSRSKHGSPGGYRNQRSGRDKYGPPVRTEFR 113
Query: 112 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSE 171
++V L S SWQDLKD MR+AG+V ++ ++R G++++ SY D+K A+ KLD +E
Sbjct: 114 LVVENLSSRCSWQDLKDFMRQAGEVTYADAHKERPN-EGVIEFRSYSDLKRAVEKLDGTE 172
Query: 172 F 172
Sbjct: 173 I 173
>gi|47212671|emb|CAF94152.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1550
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 101/188 (53%), Gaps = 7/188 (3%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R +VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYRARENDVERFFKGYGKILEVDLK-----NGYGFVEFDDPRDADDAVYDLNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLK 127
G R+ VE G RR R G R G R+DYR++V L S SWQDLK
Sbjct: 59 ELCGERVIVEHTKGPRRDGGYSGRSGYGRWGRDRYGPPIRTDYRLIVENLSSRCSWQDLK 118
Query: 128 DHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYD 187
D+MR+AG+V ++ + R G++++ Y DMK A+ KLD +E R
Sbjct: 119 DYMRQAGEVTYADTHKGRKN-EGVIEFRQYSDMKRALEKLDGTEVNGRKIRLIEDRPGAK 177
Query: 188 SRRSYSRS 195
RRSYSRS
Sbjct: 178 RRRSYSRS 185
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 73/127 (57%), Gaps = 2/127 (1%)
Query: 47 YAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR-GVS 105
Y F+EF+D RDA+DA+ +G G R+ VE G RR R G R G
Sbjct: 1209 YGFVEFDDPRDADDAVYDLNGKELCGERVIVEHTKGPRRDGGYSGRSGYGRWGRDRYGPP 1268
Query: 106 RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIR 165
R+DYR++V L S SWQDLKD+MR+AG+V ++ + R G++++ Y DMK A+
Sbjct: 1269 IRTDYRLIVENLSSRCSWQDLKDYMRQAGEVTYADTHKGRKN-EGVIEFRQYSDMKRALE 1327
Query: 166 KLDRSEF 172
KLD +E
Sbjct: 1328 KLDGTEV 1334
>gi|402219133|gb|EJT99207.1| hypothetical protein DACRYDRAFT_23817 [Dacryopinax sp. DJM-731 SS1]
Length = 319
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 106/207 (51%), Gaps = 26/207 (12%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
SS+ +Y+G +P D +++E F YG I DI + G+ F+EFE+ +DAED +
Sbjct: 2 SSKRIYIGKMPRDAMKQDIEKFFEGYGRIQDIRIMN-----GFGFVEFENPKDAEDVVAN 56
Query: 65 RDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQ 124
G N G + +ELA RR R + G R +RR YRVL+ G+ SWQ
Sbjct: 57 FQGKNLLGEPIIIELAKESRRE-----RGGGFEERGPRPFTRRPGYRVLIHGVSRDTSWQ 111
Query: 125 DLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSR------ 178
DLKD R AG V FS + R+ G GI++Y + DD++ A+R L+ E R R
Sbjct: 112 DLKDFGREAGAVTFSDLDRENPG-EGILEYLTPDDLENALRLLNNRELRGVTVRVSRGEG 170
Query: 179 -------SYVRVREYDSRRSYSRSPSR 198
Y R +E+ RR SRSP R
Sbjct: 171 GLGGSGVDYSRDKEF--RRDRSRSPGR 195
>gi|159463554|ref|XP_001690007.1| SR protein factor [Chlamydomonas reinhardtii]
gi|158283995|gb|EDP09745.1| SR protein factor [Chlamydomonas reinhardtii]
Length = 338
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/76 (68%), Positives = 61/76 (80%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VGNLP D R REVEDLF+KYG I +DLKI PRPP +AF+EFED RDA DA+RGRDG
Sbjct: 6 VFVGNLPMDVREREVEDLFFKYGRIRSVDLKIGPRPPAFAFVEFEDERDAADAVRGRDGI 65
Query: 69 NFDGYRLRVELAHGGR 84
F G RLRVE++HG R
Sbjct: 66 EFQGQRLRVEVSHGRR 81
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 65/83 (78%)
Query: 103 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 162
G SRR+D+RV+VT LP S SWQDLKDHMRRAG+V FSQV RD GM G++DY + D++
Sbjct: 162 GPSRRTDFRVIVTNLPLSCSWQDLKDHMRRAGEVTFSQVMRDGRGMLGLIDYATRSDLEL 221
Query: 163 AIRKLDRSEFRNAFSRSYVRVRE 185
A+RKLD SEF+N + + +RVRE
Sbjct: 222 ALRKLDDSEFKNPYDTARIRVRE 244
>gi|307192389|gb|EFN75624.1| Serine-arginine protein 55 [Harpegnathos saltator]
Length = 313
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 149/321 (46%), Gaps = 68/321 (21%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS+R ++VG L R R++E F KYG I ++ +K G+AF+EF+DYRDA+D
Sbjct: 1 MSTR----VFVGGLTYRVRERDLEKFFRKYGRIKEVAMK-----NGFAFVEFDDYRDADD 51
Query: 61 AIRGRDGYNFDGYRLRVELAHG-------------------GRRHSSSMDRYSSYSSGGS 101
A+ +G G R+ VE A G RR + S++R + +S
Sbjct: 52 AVYELNGKELLGERITVERARGTPRGSDQWRYGDSRGGYGDSRRSADSVNRNTRTASSYK 111
Query: 102 RGVSR-----RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTS 156
+ + R R++YR+ V L S SWQDLKD+MR+AG+V ++ + R G+V++ +
Sbjct: 112 QSLPRYGPPTRTEYRLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRN-EGVVEFAT 170
Query: 157 YDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSY--------------------SRSP 196
Y D+K AI KLD +E R+R + +R S +P
Sbjct: 171 YSDLKNAIDKLDDTELNGR------RIRLIEDKRQVAVVPVAAAVAVAVPNQEHIRSPNP 224
Query: 197 SRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYSPRGKYSRRSPSLSPARSASQRSPS 256
S +P + + P ++ + SR+ S SP +P R SP RS +P
Sbjct: 225 SLNPNLRNAAAHVPNPNQETAQSRNLSQSP-----NPDLVLGPRLRGQSPGRSP---NPK 276
Query: 257 GSPPRSFSRSGSFARTWGVGY 277
S P+ R+ S +G+
Sbjct: 277 PSLPQRIDRAASAHEVTDLGH 297
>gi|395505266|ref|XP_003756964.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 2
[Sarcophilus harrisii]
Length = 321
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 102/170 (60%), Gaps = 12/170 (7%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R ++++ F YG ++++DLK GY F+EFED RDA+DA+ +G
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRR----HSSSMDRYSSYSSGG--SRGVSRRSDYRVLVTGLPSSAS 122
+ G R+ VE A G RR +S RYSS + G G R++YR++V L S S
Sbjct: 59 DLCGERVIVEHARGPRRDRDGYSYGSRRYSSRRATGRDKYGPPVRTEYRLIVENLSSRCS 118
Query: 123 WQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
WQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ KLD +E
Sbjct: 119 WQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 167
>gi|195451842|ref|XP_002073099.1| GK13948 [Drosophila willistoni]
gi|194169184|gb|EDW84085.1| GK13948 [Drosophila willistoni]
Length = 362
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 99/182 (54%), Gaps = 25/182 (13%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP R R++E F YG DI +K GY F+EFEDYRDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSY-------------SSGGSRGVSR-----RSDY 110
G R+ VE A G R S+ DRY + SR SR R++Y
Sbjct: 61 ELLGERVVVEPARGTAR-GSNRDRYDDRYGNRRGGGGRYNDKNKNSRSSSRYGPPLRTEY 119
Query: 111 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRS 170
R++V L S SWQDLKD+MR+AG+V ++ + R G+V++ S DMK AI KLD +
Sbjct: 120 RLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRN-EGVVEFASLSDMKTAIEKLDDT 178
Query: 171 EF 172
E
Sbjct: 179 EL 180
>gi|440909520|gb|ELR59420.1| Serine/arginine-rich splicing factor 9, partial [Bos grunniens
mutus]
Length = 159
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 67/129 (51%), Positives = 86/129 (66%), Gaps = 10/129 (7%)
Query: 56 RDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVT 115
RDAEDAI GR+GY++ RLRVE + R G S +RRSD+RVLV+
Sbjct: 1 RDAEDAIYGRNGYDYGQCRLRVEFPR------TYGGRGGWPRGGRSGPPTRRSDFRVLVS 54
Query: 116 GLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-N 174
GLP S SWQDLKDHMR AGDVC++ V +D GM G+V+Y +DM+YA+RKLD ++FR +
Sbjct: 55 GLPPSGSWQDLKDHMREAGDVCYADVQKD--GM-GMVEYLRKEDMEYALRKLDETKFRSH 111
Query: 175 AFSRSYVRV 183
SY+RV
Sbjct: 112 EGETSYIRV 120
>gi|395513899|ref|XP_003761159.1| PREDICTED: serine/arginine-rich splicing factor 9 [Sarcophilus
harrisii]
Length = 274
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/171 (43%), Positives = 96/171 (56%), Gaps = 26/171 (15%)
Query: 57 DAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTG 116
DAEDAI GR+GY++ RLRVEL SRRS+YRVLV+G
Sbjct: 120 DAEDAIYGRNGYDYGQCRLRVELPRNPGGGGPRGRTGPP---------SRRSEYRVLVSG 170
Query: 117 LPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NA 175
LP S SWQDLKDHMR AG VC++ V +D GM G+V++ +DM+YA+R+LD S+FR +
Sbjct: 171 LPPSGSWQDLKDHMREAGGVCYADVQKD--GM-GVVEFLRKEDMEYALRRLDDSKFRSHE 227
Query: 176 FSRSYVRVREYDSRRSYSRSPSR--------SPYYSRSRSRSPYYSRSRSP 218
SY+RV Y R + SPY SR SPYY+ +P
Sbjct: 228 GETSYIRV--YPERSTSYGYSRSRSGSRGRDSPYQSRG---SPYYTSPYAP 273
>gi|310772202|ref|NP_001006476.2| serine/arginine-rich splicing factor 5a [Gallus gallus]
gi|326920574|ref|XP_003206544.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Meleagris
gallopavo]
Length = 278
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 95/166 (57%), Gaps = 8/166 (4%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VG+L R R+VE F YG I +I LK G+ F+EFED+RDA+DAI +G
Sbjct: 6 VFVGHLSSRARERDVEKFFKGYGRIREIHLK-----NGFGFVEFEDHRDADDAIYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR--GVSRRSDYRVLVTGLPSSASWQDL 126
R+ +E A R R+S YS GS G R+++R++V L S SWQDL
Sbjct: 61 ELCDERVTIEHARARRGRGRFAQRFSYYSQSGSSRYGPPVRTEHRIIVENLSSRISWQDL 120
Query: 127 KDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
KD MR+AG+V + R+ G+V++ SY DMK A+ KLD +E
Sbjct: 121 KDVMRKAGEVTYVDAHRNNRN-EGVVEFASYSDMKSALEKLDGTEL 165
>gi|391330800|ref|XP_003739841.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Metaseiulus
occidentalis]
Length = 303
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 97/176 (55%), Gaps = 27/176 (15%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
LYVG L TR R++E LF YG I +I LK G+AF+EFED RDAEDA +G
Sbjct: 9 LYVGRLSHRTRERDLERLFSPYGRIREILLK-----SGFAFVEFEDTRDAEDACYELNGK 63
Query: 69 NFDGYRLRVELAHG-----------GRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGL 117
+ G R+ VE+A G G+R MD+Y + +R+DYRV+V L
Sbjct: 64 DLLGDRIVVEMAKGTERGRGGLPMRGQRDKGWMDKYGPF---------KRTDYRVIVGNL 114
Query: 118 PSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
+ SWQDLKD MR+ G +VC++ + R ++++ + DMK AI+K D E
Sbjct: 115 STRVSWQDLKDMMRKVGCEVCYADAHKHRKN-EAVIEFATRSDMKRAIQKYDGHEV 169
>gi|338727750|ref|XP_001488704.3| PREDICTED: serine/arginine-rich splicing factor 9 [Equus caballus]
Length = 289
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/145 (47%), Positives = 90/145 (62%), Gaps = 16/145 (11%)
Query: 46 GYAFLEFEDYR------DAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSG 99
G+ FLE DAEDAI GR+GY++ RLRVE + R G
Sbjct: 115 GWWFLEATALSWSLPSGDAEDAIYGRNGYDYGQCRLRVEFPR------TYGGRGGWPRGG 168
Query: 100 GSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDD 159
+ +RRSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D GM G+V+Y +D
Sbjct: 169 RNGPPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKD--GM-GMVEYLRKED 225
Query: 160 MKYAIRKLDRSEFR-NAFSRSYVRV 183
M+YA+RKLD ++FR + SY+RV
Sbjct: 226 MEYALRKLDDTKFRSHEGETSYIRV 250
>gi|410911522|ref|XP_003969239.1| PREDICTED: uncharacterized protein LOC101080136 isoform 1 [Takifugu
rubripes]
Length = 374
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/165 (40%), Positives = 93/165 (56%), Gaps = 7/165 (4%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R +VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYRARENDVERFFKGYGKILEVDLK-----NGYGFVEFDDPRDADDAVYDLNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLK 127
G R+ VE G RR R G R G R+DYR++V L S SWQDLK
Sbjct: 59 ELCGERVIVEHTKGPRRDGGYSGRSGYGRWGRDRYGPPIRTDYRLIVENLSSRCSWQDLK 118
Query: 128 DHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
D+MR+AG+V ++ + R G++++ Y DMK A+ KLD +E
Sbjct: 119 DYMRQAGEVTYADTHKGRKN-EGVIEFRQYSDMKRALEKLDGTEV 162
>gi|432092851|gb|ELK25217.1| Serine/arginine-rich splicing factor 9 [Myotis davidii]
Length = 199
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 63/129 (48%), Positives = 83/129 (64%), Gaps = 10/129 (7%)
Query: 56 RDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVT 115
RDAEDA+ GR+GY++ RLRVE + +RRSD+RVLV+
Sbjct: 41 RDAEDAVYGRNGYDYGQCRLRVEFPRAYGGRGGWPRGGRNGPP------TRRSDFRVLVS 94
Query: 116 GLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-N 174
GLP S SWQDLKDHMR AGDVC++ V +D GM G+V+Y +DM+YA+RKLD ++FR +
Sbjct: 95 GLPPSGSWQDLKDHMREAGDVCYADVQKD--GM-GMVEYLRKEDMEYALRKLDDTKFRSH 151
Query: 175 AFSRSYVRV 183
SY+RV
Sbjct: 152 EGETSYIRV 160
>gi|112982956|ref|NP_001037676.1| splicing factor arginine/serine-rich 6 [Bombyx mori]
gi|109706819|gb|ABG42996.1| splicing factor arginine/serine-rich 6 [Bombyx mori]
Length = 306
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 98/171 (57%), Gaps = 13/171 (7%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP R R++E F +G I DI +K GY F+EFEDYRDA+DA+ +G
Sbjct: 6 VYVGGLPFGVRERDLEKFFKGFGRIRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSM---DRYSSYSSGG----SRGVSRRSDYRVLVTGLPSSA 121
G R+ VE A G R + DR+ S GG G R++YR++V + S
Sbjct: 61 ELLGERVVVEPARGIDRSADRYRRGDRHYERSGGGRSRYEYGPPTRTEYRLIVENVSSRI 120
Query: 122 SWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
SWQDLKD+MR+AG+V ++ + G+V++ ++ DM+ AI KLD +E
Sbjct: 121 SWQDLKDYMRQAGEVTYADAHKQHRN-EGVVEFATHSDMRAAIEKLDGTEL 170
>gi|189233695|ref|XP_001812208.1| PREDICTED: similar to B52 CG10851-PA [Tribolium castaneum]
Length = 300
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 98/171 (57%), Gaps = 13/171 (7%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VG L R R++E F KYG I ++ +K G+AF+EF+DYRDA+DA+ +G
Sbjct: 5 VFVGGLTYRVRERDIEKFFRKYGRIKEVAMK-----NGFAFVEFDDYRDADDAVYELNGK 59
Query: 69 NFDGYRLRVELAHGGRRHSS----SMDRYSSYSSGGSR---GVSRRSDYRVLVTGLPSSA 121
G R+ VE A G R S R G SR G R++YR++V L S
Sbjct: 60 ELLGERVSVERARGTPRGCDQWRGSGGRGYGPPRGRSRDKYGPPTRTEYRLIVENLSSRV 119
Query: 122 SWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
SWQDLKD+MR+AG+V ++ + R G+V++ SY DMK AI KLD +E
Sbjct: 120 SWQDLKDYMRQAGEVTYADAHKQRRN-EGVVEFASYSDMKNAIDKLDDTEL 169
>gi|241574282|ref|XP_002403075.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
gi|215502148|gb|EEC11642.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
Length = 364
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 104/177 (58%), Gaps = 18/177 (10%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M+SR +YVG L D R R++E F +G I +I +K G+ F+EF+D RDA+D
Sbjct: 1 MTSR----VYVGRLNYDVRERDLERFFKGFGRIREISIK-----NGFGFVEFDDPRDADD 51
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR-----GVSRRSDYRVLVT 115
A+ +G + G R+ VELA G RR + D Y S S+ S G R++Y++ V
Sbjct: 52 AVYELNGKDLMGDRVSVELARGIRRGA---DYYRSRSTAPSPPRRRYGPPTRTEYQLTVE 108
Query: 116 GLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
L S SWQDLKD+MR+AG+V ++ + R G+V++ +Y DMK A+ KLD ++
Sbjct: 109 NLSSRVSWQDLKDYMRQAGEVTYADAHKLRRN-EGVVEFATYSDMKNALDKLDNTDL 164
>gi|78099805|sp|P26686.4|SRR55_DROME RecName: Full=Serine-arginine protein 55; Short=SRP55; AltName:
Full=52 kDa bracketing protein; AltName: Full=B52
protein; AltName: Full=Protein enhancer of deformed
Length = 376
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 97/182 (53%), Gaps = 24/182 (13%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP R R++E F YG DI +K GY F+EFEDYRDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYS-------------SYSSGGSRGVSR-----RSDY 110
G R+ VE A G R S+ + + SR SR R++Y
Sbjct: 61 ELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPLRTEY 120
Query: 111 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRS 170
R++V L S SWQDLKD+MR+AG+V ++ + R G+V++ S DMK AI KLD +
Sbjct: 121 RLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRN-EGVVEFASLSDMKTAIEKLDDT 179
Query: 171 EF 172
E
Sbjct: 180 EL 181
>gi|7637|emb|CAA44483.1| 52-kD bracketing protein [Drosophila melanogaster]
Length = 376
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 97/182 (53%), Gaps = 24/182 (13%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP R R++E F YG DI +K GY F+EFEDYRDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYS-------------SYSSGGSRGVSR-----RSDY 110
G R+ VE A G R S+ + + SR SR R++Y
Sbjct: 61 ELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPLRTEY 120
Query: 111 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRS 170
R++V L S SWQDLKD+MR+AG+V ++ + R G+V++ S DMK AI KLD +
Sbjct: 121 RLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRN-EGVVEFASLSDMKTAIEKLDDT 179
Query: 171 EF 172
E
Sbjct: 180 EL 181
>gi|348688828|gb|EGZ28642.1| hypothetical protein PHYSODRAFT_353568 [Phytophthora sojae]
Length = 173
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/174 (40%), Positives = 100/174 (57%), Gaps = 15/174 (8%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP D RE++D F +YG + +I + PPG+AF++FED RDA+DAIR DG
Sbjct: 5 VYVGGLPRDATSREIQDGFNRYGHVSNI--WVARNPPGFAFVDFEDPRDADDAIRSMDGR 62
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGG----------SRGVSRRSDYRVLVTGLP 118
+F G R+RVELA GG R R G R +R+DYRV VT LP
Sbjct: 63 DFLGGRIRVELARGGSRRDGGGRRGDDDRGGYGGRGGDRFDRGRNPPQRTDYRVRVTDLP 122
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
W+++KD +R G+V + + D + I ++ + DDM+ AI+KLD +EF
Sbjct: 123 RDVDWRNVKDFLRTGGEVTYCNIEAD---GSAIAEFQTKDDMEDAIKKLDDTEF 173
>gi|378727012|gb|EHY53471.1| hypothetical protein HMPREF1120_01663 [Exophiala dermatitidis
NIH/UT8656]
Length = 316
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/254 (34%), Positives = 122/254 (48%), Gaps = 33/254 (12%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGP--IVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP + ++++D F +G I +I L G+ F+E+ED DA
Sbjct: 1 MADVSSTRLYLGNLPRNITKQDIQDHFGTHGAGSIKEIKLMN-----GFGFIEYEDPMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTG 116
D + G F G RL V+ A G RR ++ R + RR+ YR+ +TG
Sbjct: 56 RDVVPAFHGTEFKGERLTVQFARGPRRK-------DDFNGPSDRNIPRPRRTIYRMQITG 108
Query: 117 LPSSASWQDLKDHMRRAG--DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRN 174
L SWQDLKD R +G DV +S+ R+R G G V++ + D+K A+ KLD F+
Sbjct: 109 LQPDTSWQDLKDFARNSGQLDVVYSETGRERDG-KGFVEFETQADLKTAVEKLDGQTFKG 167
Query: 175 AFSRSYVRVR-EYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYSP 233
A ++ E RSY + RSP R Y+ R P R W SP
Sbjct: 168 ATVHCVADIQDERPDMRSYRQ---RSPPRGRYGPMDDYHDRRGPPQRGW---------SP 215
Query: 234 RGK-YSRRSPSLSP 246
RG Y RSP P
Sbjct: 216 RGSGYRERSPGRRP 229
>gi|348514746|ref|XP_003444901.1| PREDICTED: hypothetical protein LOC100690823 [Oreochromis
niloticus]
Length = 396
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 97/172 (56%), Gaps = 18/172 (10%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R ++++ F YG +++IDLK GY F+EFED RDA+DA+ +G
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGKLMEIDLK-----NGYGFVEFEDNRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRR-------HSSSMDRYSSYSSGGSRGVSR-----RSDYRVLVTG 116
G R+ VE A G RR R + YSS G + R++YR++V
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYGGGYWGGGRSNGYSSRSRSGRDKYGPPVRTEYRLIVEN 118
Query: 117 LPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLD 168
L S SWQDLKD MR+AG+V ++ ++R G++++ +Y DMK A+ KLD
Sbjct: 119 LSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRTYSDMKRALDKLD 169
>gi|347972221|ref|XP_003436860.1| AGAP004592-PE [Anopheles gambiae str. PEST]
gi|333469348|gb|EGK97259.1| AGAP004592-PE [Anopheles gambiae str. PEST]
Length = 351
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 98/180 (54%), Gaps = 22/180 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP R R++E F YG DI +K GY F+EFEDYRDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSS---------------SMDRYSSYSSGGSR-GVSRRSDYRV 112
G R+ VE A G R S D+Y S S SR G R++YR+
Sbjct: 61 ELLGERVVVEPARGTARGPSGYRERDRYDRDRRGGRYDKYKSNSRNSSRYGPPLRTEYRL 120
Query: 113 LVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
+V L + SWQDLKD+MR+AG+V ++ + R G+V++ + DMK AI KLD +E
Sbjct: 121 VVENLSTRVSWQDLKDYMRQAGEVTYADAHKQRKN-EGVVEFATLSDMKTAIEKLDDTEL 179
>gi|300123677|emb|CBK24949.2| unnamed protein product [Blastocystis hominis]
Length = 325
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 100/180 (55%), Gaps = 17/180 (9%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
S+ LYVGNL ++ LF ++G I DI +K + YAF+EF +A++A
Sbjct: 2 SKRLYVGNLEYGVENDDLSKLFGQFGEITDIAIKDRGQGAVYAFVEFSKEEEADNAQSSL 61
Query: 66 DGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGS--RGVSRRSDYRVLVTGLPSSASW 123
+ +F G +RVE G R YS+G S RG RR+DYR+ VT LP + SW
Sbjct: 62 NSTHFMGRDIRVEYTRGLR-----------YSTGDSIRRGPPRRTDYRIEVTHLPHNCSW 110
Query: 124 QDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRV 183
QDLKD+M R G V + + R G G+V++ Y+DMK A+RKLD ++ + +Y+ V
Sbjct: 111 QDLKDYMSRIGPVGYCDI---RHGY-GVVEFIHYEDMKRAVRKLDDTKMYSNGESNYIHV 166
>gi|1403024|emb|CAA90876.1| hnRNP protein [Chironomus tentans]
Length = 322
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 96/178 (53%), Gaps = 20/178 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP TR R++E F YG DI +K GY F+EFEDYRDA+DA+ +G
Sbjct: 6 VYVGGLPYGTRERDLEKFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSS---------SMDRYSSYSSGGSRGVSR-----RSDYRVLV 114
G R+ VE A G R S + SR SR R++YR++V
Sbjct: 61 ELLGERVVVEPARGTARGGSHRDRYDDRYGRRGRYDRYNNSSRSNSRYGPPLRTEYRLIV 120
Query: 115 TGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
L S SWQDLKD+MR+AG+V ++ + + G+V++ + DMK AI KLD +E
Sbjct: 121 ENLSSRVSWQDLKDYMRQAGEVTYADAHK-QNRNEGVVEFATLKDMKTAIEKLDDTEL 177
>gi|442754133|gb|JAA69226.1| Putative alternative splicing factor srp55/b52/srp75 rrm
superfamily [Ixodes ricinus]
Length = 363
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 104/177 (58%), Gaps = 18/177 (10%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M+SR +YVG L D R R++E F +G I +I +K G+ F+EF+D RDA+D
Sbjct: 1 MTSR----VYVGRLNYDVRERDLERFFKGFGRIREISIK-----NGFGFVEFDDPRDADD 51
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR-----GVSRRSDYRVLVT 115
A+ +G + G R+ VELA G RR + D Y S S+ S G R++Y++ V
Sbjct: 52 AVYELNGKDLMGDRVSVELARGIRRGA---DYYRSRSTAPSPPRRRYGPPTRTEYQLTVE 108
Query: 116 GLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
L S SWQDLKD+MR+AG+V ++ + R G+V++ +Y DMK A+ KLD ++
Sbjct: 109 NLSSRVSWQDLKDYMRQAGEVTYADAHKLRRN-EGVVEFATYSDMKNALDKLDNTDL 164
>gi|91091338|ref|XP_966697.1| PREDICTED: similar to hnRNP protein [Tribolium castaneum]
Length = 282
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 94/164 (57%), Gaps = 6/164 (3%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP T R++E F YG + D+ +K GY F+EF+D+RDA+DA+ +G
Sbjct: 6 VYVGGLPYGTTERDLERFFRGYGRMRDVLIK-----NGYGFVEFDDHRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
G R+ VE A G R S + S G R++YR++V L S SWQDLKD
Sbjct: 61 KLLGERVTVERARGTPRGRDQWSSRSDHRSHERYGPPTRTNYRLIVENLSSRISWQDLKD 120
Query: 129 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
+MR+AG+V ++ + G+V++ SY D+K AI KLD +E
Sbjct: 121 YMRQAGEVTYADAHKQHRN-EGVVEFASYSDLKNAIEKLDDTEL 163
>gi|449274709|gb|EMC83787.1| Splicing factor, arginine/serine-rich 4, partial [Columba livia]
Length = 257
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 96/166 (57%), Gaps = 8/166 (4%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VG+L R R+VE F YG I +I LK G+ F+EFED+RDA+DAI +G
Sbjct: 6 VFVGHLSSRARERDVEKFFKGYGRIREIHLK-----NGFGFVEFEDHRDADDAIYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSY-SSGGSR-GVSRRSDYRVLVTGLPSSASWQDL 126
R+ +E A R R+S Y S GSR G R+++R++V L S SWQDL
Sbjct: 61 ELCDERVTIEHARARRGRGRFSQRFSYYPSQSGSRYGPPIRTEHRIIVENLSSRISWQDL 120
Query: 127 KDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
KD MR+AG+V + R+ G+V++ SY DMK A+ KLD +E
Sbjct: 121 KDVMRKAGEVTYVDAHRNNRN-EGVVEFASYSDMKSALEKLDGTEL 165
>gi|226288775|gb|EEH44287.1| hypothetical protein PADG_00576 [Paracoccidioides brasiliensis
Pb18]
Length = 303
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/256 (34%), Positives = 125/256 (48%), Gaps = 46/256 (17%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKY---GPIVDIDLKIPPRPPGYAFLEFEDYRD 57
MS SS LY+GNLP + +E+ED F + G I +I L G+ F+E+ED D
Sbjct: 1 MSEVSSTRLYLGNLPRNVTKQEIEDHFNSHHGSGKITEIKLMS-----GFGFIEYEDAMD 55
Query: 58 AEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGL 117
A+D + DG +F G RL V+ A G R + +S S RR+ YR+ ++GL
Sbjct: 56 AKDVV--PDGTDFKGERLTVQFARGPRHKET----FSGPPDRSSAPRPRRTIYRMQISGL 109
Query: 118 PSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAF 176
P + SWQDLKD R++G DV +S+ D G V++ + D+K A+ KLD EF+ +
Sbjct: 110 PET-SWQDLKDFARQSGLDVVYSETGHD---GRGFVEFETGSDLKTAVEKLDGREFKGSR 165
Query: 177 SRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRS-------- 228
++ + R+ R PY RSRSP R Y P
Sbjct: 166 VLCTQDIQSQEDRQ------PREPY------------RSRSPGRRGGYHPYEEYDRRGAP 207
Query: 229 -RSYSPRGKYSRRSPS 243
R YSPR Y RSP+
Sbjct: 208 PRGYSPRNHYRERSPA 223
>gi|355557751|gb|EHH14531.1| hypothetical protein EGK_00474, partial [Macaca mulatta]
Length = 477
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 92/154 (59%), Gaps = 10/154 (6%)
Query: 23 VEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHG 82
VE F YG I+++DLK GY F+EF+D RDA+DA+ +G + G R+ VE A G
Sbjct: 1 VERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARG 55
Query: 83 GRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCF 138
RR S S Y SG + G R++YR++V L S SWQDLKD+MR+AG+V +
Sbjct: 56 PRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTY 115
Query: 139 SQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
+ + R G++++ SY DMK A+ KLD +E
Sbjct: 116 ADAHKGRKN-EGVIEFVSYSDMKRALEKLDGTEV 148
>gi|386765708|ref|NP_788671.2| B52, isoform M [Drosophila melanogaster]
gi|386765712|ref|NP_001014619.2| B52, isoform O [Drosophila melanogaster]
gi|312596948|gb|ADQ89797.1| GH20537p [Drosophila melanogaster]
gi|383292689|gb|AAN13579.2| B52, isoform M [Drosophila melanogaster]
gi|383292691|gb|AAX52949.2| B52, isoform O [Drosophila melanogaster]
Length = 355
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 97/182 (53%), Gaps = 24/182 (13%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP R R++E F YG DI +K GY F+EFEDYRDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYS-------------SYSSGGSRGVSR-----RSDY 110
G R+ VE A G R S+ + + SR SR R++Y
Sbjct: 61 ELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPLRTEY 120
Query: 111 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRS 170
R++V L S SWQDLKD+MR+AG+V ++ + R G+V++ S DMK AI KLD +
Sbjct: 121 RLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRN-EGVVEFASLSDMKTAIEKLDDT 179
Query: 171 EF 172
E
Sbjct: 180 EL 181
>gi|440893251|gb|ELR46093.1| Serine/arginine-rich splicing factor 6 [Bos grunniens mutus]
Length = 348
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 103/177 (58%), Gaps = 19/177 (10%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L + R ++++ F YG +++IDLK GY F+EFED RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRH------SSSMDR-----YSSYSSGG--SRGVSRRSDYRVLVT 115
G R+ VE A G RR SS D+ YSS + G G R+++R++V
Sbjct: 59 ELCGERVIVEHARGPRRDRGDWVVVSSHDKGGGGGYSSRRTSGRDKYGPPVRTEFRLIVE 118
Query: 116 GLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
L S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ KLD +E
Sbjct: 119 NLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 174
>gi|340378226|ref|XP_003387629.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Amphimedon
queenslandica]
Length = 309
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 98/176 (55%), Gaps = 18/176 (10%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G LP R ++VE F +G I DI+LK G+ F+EF+DYRDAEDA+ G
Sbjct: 7 IYIGRLPYQAREKDVERFFRGFGRIRDINLK-----NGFGFVEFDDYRDAEDAVYELHGR 61
Query: 69 NFDGYRLRVELAHGGRRHSSS-----------MDRYSSYSSGGSR-GVSRRSDYRVLVTG 116
G R+ VE A G R DR S S+ G R+D+R+LV
Sbjct: 62 ELLGERVIVEHARGNRDRDDYRDRRGGGRDFRQDRGRDGRSNASKYGPPLRTDFRILVEN 121
Query: 117 LPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
+ S SWQDLKD MR AG++ ++ + + G GIV+Y +Y+DMK AIRKL+ ++
Sbjct: 122 VSSRVSWQDLKDFMRTAGEITYADAHKQKTG-EGIVEYATYEDMKNAIRKLNGTDL 176
>gi|221130958|ref|XP_002164143.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 2
[Hydra magnipapillata]
Length = 264
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 105/180 (58%), Gaps = 14/180 (7%)
Query: 1 MSSRSS---RTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDY 55
MSSR + ++VG L + R+R++E+ F G + D+++K+ GYAF+EFED
Sbjct: 1 MSSRDNPNRNRIFVGRLNPEARVRDLENFFKDNGFSRLKDVNIKL-----GYAFVEFEDK 55
Query: 56 RDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM---DRYSSYSSGGSRGVSRRSDYRV 112
RDA+DA+ D F G RL VE A G R DR + + RG +++R+
Sbjct: 56 RDADDAVYELDRKEFFGSRLTVEHAKHGPRADMDKRDGDRRKGHENDRGRGRPYNTEWRL 115
Query: 113 LVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
+VT L S W DLKD+ R AG+V F++ ++R G G+V++ SY +MK A++K D SEF
Sbjct: 116 IVTNLSSRVGWMDLKDYFRSAGEVTFTKANKERVG-EGVVEFRSYREMKRALKKFDGSEF 174
>gi|8497|emb|CAA41556.1| SRp55 [Drosophila melanogaster]
Length = 350
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 94/177 (53%), Gaps = 19/177 (10%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP R R++E F YG DI +K GY F+EFEDYRDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYS-------------SYSSGGSRGVSRRSDYRVLVT 115
G R+ VE A G R S+ + S G R++YR++V
Sbjct: 61 ELLGERVVVEPARGSARGSNRDRYDDRYGGRRGGGGGRYNEKSSSRYGPPLRTEYRLIVE 120
Query: 116 GLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
L S SWQDLKD+MR+AG+V ++ + R G+V++ S DMK AI KLD +E
Sbjct: 121 NLSSRVSWQDLKDYMRQAGEVTYADAHKQRRN-EGVVEFASLSDMKTAIEKLDDTEL 176
>gi|449502441|ref|XP_002200515.2| PREDICTED: serine/arginine-rich splicing factor 4-like [Taeniopygia
guttata]
Length = 277
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 97/167 (58%), Gaps = 9/167 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VG+L R R+VE F YG I +I LK G+ F+EFED+RDA+DAI +G
Sbjct: 6 VFVGHLSSRARERDVEKFFKGYGRIREIHLK-----NGFGFVEFEDHRDADDAIYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSY--SSGGSR-GVSRRSDYRVLVTGLPSSASWQD 125
R+ +E A R R+S Y +SG SR G R+++R++V L S SWQD
Sbjct: 61 ELCDERVTIEHARARRGRGRFSQRFSYYQSTSGSSRYGPPVRTEHRIIVENLSSRISWQD 120
Query: 126 LKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
LKD MR+AG+V + R+ G+V++ SY DMK A+ KLD +E
Sbjct: 121 LKDVMRKAGEVTYVDAHRNNRN-EGVVEFASYSDMKSALEKLDGTEL 166
>gi|239606902|gb|EEQ83889.1| pre-RNA splicing factor Srp2 [Ajellomyces dermatitidis ER-3]
gi|327351368|gb|EGE80225.1| RNA recognition domain-containing protein containing protein
[Ajellomyces dermatitidis ATCC 18188]
Length = 299
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/259 (35%), Positives = 130/259 (50%), Gaps = 38/259 (14%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKY---GPIVDIDLKIPPRPPGYAFLEFEDYRD 57
M+ SS LY+GNLP + +E+ED F + G I +I L G+ F+E+ED D
Sbjct: 1 MTEVSSTRLYLGNLPRNVTKQEIEDHFNSHHGSGKITEIKLMS-----GFGFIEYEDAMD 55
Query: 58 AEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGL 117
A+D + DG +F G RL V+ A G R + +S S S RR+ YR+ ++GL
Sbjct: 56 AKDVVP--DGTDFKGERLTVQFARGPRHKET----FSGPSDRSSAPRPRRTIYRMQISGL 109
Query: 118 PSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAF 176
P + SWQDLKD R++G DV +S+ D G V++ + D+K A+ KLD EF+ +
Sbjct: 110 PET-SWQDLKDFARQSGLDVVYSETGHD---GRGFVEFETGSDLKTAVEKLDGREFKGSR 165
Query: 177 SRSYVRVREYDSRRSYSRSPSRSPYYSRSRSR----SPYYSRSRSPSRSWSYSPRS---- 228
++ + R+ SR PY SRS R PY R + YSPR+
Sbjct: 166 VLCTQDIQSLEDRQ------SRDPYRSRSPGRRGGYHPYDDYDRRGAPRGGYSPRNHYRE 219
Query: 229 -----RSYSPRGKYSRRSP 242
R Y R Y RR+P
Sbjct: 220 RSPGRRDYYDRDGYGRRTP 238
>gi|195036928|ref|XP_001989920.1| GH18528 [Drosophila grimshawi]
gi|193894116|gb|EDV92982.1| GH18528 [Drosophila grimshawi]
Length = 360
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 96/177 (54%), Gaps = 20/177 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP R R++E F YG DI +K GY F+EFEDYRDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSY-------------SSGGSRGVSRRSDYRVLVT 115
G R+ VE A G R S+ DRY S G R++YR++V
Sbjct: 61 ELLGERVVVEPARGTAR-GSNRDRYEDRYGGRRGGGGRYNDKSSSRYGPPLRTEYRLIVE 119
Query: 116 GLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
L S SWQDLKD+MR+AG+V ++ + R G+V++ S DMK AI KLD +E
Sbjct: 120 NLSSRVSWQDLKDYMRQAGEVTYADAHKQRRN-EGVVEFASLSDMKTAIEKLDDTEL 175
>gi|297263673|ref|XP_001089031.2| PREDICTED: splicing factor, arginine/serine-rich 9-like [Macaca
mulatta]
Length = 162
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/129 (50%), Positives = 84/129 (65%), Gaps = 10/129 (7%)
Query: 56 RDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVT 115
RDAEDAI GR+GY++ RLRVE + R G + +RRSD+RVLV+
Sbjct: 4 RDAEDAIYGRNGYDYGQCRLRVEFPR------TYGGRGGWPRGGRNGPPTRRSDFRVLVS 57
Query: 116 GLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-N 174
GLP S SWQDLKDHMR AGDVC++ V +D GM V+Y +DM+YA+RKLD ++FR +
Sbjct: 58 GLPPSGSWQDLKDHMREAGDVCYADVQKDGVGM---VEYLRKEDMEYALRKLDDTKFRSH 114
Query: 175 AFSRSYVRV 183
SY+RV
Sbjct: 115 EGETSYIRV 123
>gi|355786589|gb|EHH66772.1| hypothetical protein EGM_03825, partial [Macaca fascicularis]
Length = 159
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/129 (50%), Positives = 84/129 (65%), Gaps = 10/129 (7%)
Query: 56 RDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVT 115
RDAEDAI GR+GY++ RLRVE + R G + +RRSD+RVLV+
Sbjct: 1 RDAEDAIYGRNGYDYGQCRLRVEFPR------TYGGRGGWPRGGRNGPPTRRSDFRVLVS 54
Query: 116 GLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-N 174
GLP S SWQDLKDHMR AGDVC++ V +D GM V+Y +DM+YA+RKLD ++FR +
Sbjct: 55 GLPPSGSWQDLKDHMREAGDVCYADVQKDGVGM---VEYLRKEDMEYALRKLDDTKFRSH 111
Query: 175 AFSRSYVRV 183
SY+RV
Sbjct: 112 EGETSYIRV 120
>gi|154284490|ref|XP_001543040.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150406681|gb|EDN02222.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 300
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/253 (36%), Positives = 129/253 (50%), Gaps = 40/253 (15%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKY---GPIVDIDLKIPPRPPGYAFLEFEDYRD 57
M+ SS LY+GNLP + +E+ED F + G I +I L G+ F+E+ED D
Sbjct: 1 MTEVSSTRLYLGNLPRNVTKQEIEDHFNSHHGSGKITEIKLMS-----GFGFIEYEDAMD 55
Query: 58 AEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGL 117
A+D + DG +F G RL V+ A G R + +S S S RR+ YR+ ++GL
Sbjct: 56 AKDVV--PDGTDFKGERLTVQFARGPRHKET----FSGPSDRSSAPRPRRTIYRMQISGL 109
Query: 118 PSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAF 176
P + SWQDLKD R++G DV +S+ D G V++ + D+K A+ KLD EF+ +
Sbjct: 110 PET-SWQDLKDFARQSGLDVVYSEAGHD---GRGFVEFETGSDLKTAVEKLDGREFKGSR 165
Query: 177 SRSYVRVREYDSRRSYSRSPSRSPYYSRSRSR----SPY--YSRSRSPSRSWSYSPRSRS 230
++ + R+ R PY SRS R PY Y R R P RS
Sbjct: 166 VLCTQDIQSQEDRQ------PRDPYRSRSPGRRGGYHPYDDYDR-RGPPRS--------G 210
Query: 231 YSPRGKYSRRSPS 243
YSPR Y RSP+
Sbjct: 211 YSPRNHYRERSPA 223
>gi|241574285|ref|XP_002403076.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
gi|215502149|gb|EEC11643.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
Length = 268
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 109/194 (56%), Gaps = 24/194 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G+L R ++++ F YG + DI LK G+ F+EF+D+RDA+DAI +G
Sbjct: 5 VFIGHLSCQVREKDLDKFFKGYGRVGDIHLK-----NGFGFVEFDDHRDADDAISDLNGK 59
Query: 69 NFDGYRLRVELAHGGRR-----------HSSSMDRYSSYSSGGSR-GVSRRSDYRVLVTG 116
G R+ VELA+G RR S ++ +R G +R++Y+++V
Sbjct: 60 ELLGERVSVELAYGSRRGPGGRIVPPRPDWRSPPPRRPFAPRDTRFGPPQRTEYQLIVEN 119
Query: 117 LPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAF 176
L S SWQDLKD+MR+AG+V ++ + R G+V++ +Y DMK AI KLD ++
Sbjct: 120 LSSHVSWQDLKDYMRQAGEVTYADAHKIRPN-EGVVEFANYSDMKNAISKLDNTDL---- 174
Query: 177 SRSYVRVREYDSRR 190
S R+R Y+ ++
Sbjct: 175 --SGRRIRLYEEKK 186
>gi|195113427|ref|XP_002001269.1| GI22065 [Drosophila mojavensis]
gi|193917863|gb|EDW16730.1| GI22065 [Drosophila mojavensis]
Length = 361
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 96/181 (53%), Gaps = 23/181 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP R R++E F YG DI +K GY F+EFEDYRDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSM-----------------DRYSSYSSGGSRGVSRRSDYR 111
G R+ VE A G R S+ D+ + S G R++YR
Sbjct: 61 ELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGRYNDKNKNSRSSSRYGPPLRTEYR 120
Query: 112 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSE 171
++V L S SWQDLKD+MR+AG+V ++ + R G+V++ S DMK AI KLD +E
Sbjct: 121 LIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRN-EGVVEFASLSDMKTAIEKLDDTE 179
Query: 172 F 172
Sbjct: 180 L 180
>gi|270014159|gb|EFA10607.1| hypothetical protein TcasGA2_TC012868 [Tribolium castaneum]
Length = 424
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 94/164 (57%), Gaps = 6/164 (3%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP T R++E F YG + D+ +K GY F+EF+D+RDA+DA+ +G
Sbjct: 6 VYVGGLPYGTTERDLERFFRGYGRMRDVLIK-----NGYGFVEFDDHRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
G R+ VE A G R S + S G R++YR++V L S SWQDLKD
Sbjct: 61 KLLGERVTVERARGTPRGRDQWSSRSDHRSHERYGPPTRTNYRLIVENLSSRISWQDLKD 120
Query: 129 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
+MR+AG+V ++ + G+V++ SY D+K AI KLD +E
Sbjct: 121 YMRQAGEVTYADAHKQHRN-EGVVEFASYSDLKNAIEKLDDTEL 163
>gi|427777525|gb|JAA54214.1| Putative alternative splicing factor asf/sf2 [Rhipicephalus
pulchellus]
Length = 333
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/186 (39%), Positives = 97/186 (52%), Gaps = 38/186 (20%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VG L D R R++E F YG I DI LK G+ F++ DYRDAEDA+R +G
Sbjct: 5 VFVGRLNYDVRERDLERFFRGYGRIEDIVLK-----NGFGFVDISDYRDAEDAVRDLNGK 59
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR--GVSRRSDYRVLVTGLPSSASWQDL 126
G R+ VELA G RR DR G R G R++Y++LV L +S SWQDL
Sbjct: 60 RLMGERVTVELARGMRRGPPDYDR-------GPRRFGPPTRTNYQLLVENLSTSVSWQDL 112
Query: 127 KDHMRRAGDVCFS-------------QVFRDRGGMT-----------GIVDYTSYDDMKY 162
KD MR+AGDV ++ R G +T G+V++ SY DMK
Sbjct: 113 KDFMRQAGDVTYTXNLSTSVSWQDLKDFMRQAGDVTYTDAHKLRRHQGVVEFASYSDMKN 172
Query: 163 AIRKLD 168
A+R LD
Sbjct: 173 ALRSLD 178
>gi|195144342|ref|XP_002013155.1| GL23543 [Drosophila persimilis]
gi|194102098|gb|EDW24141.1| GL23543 [Drosophila persimilis]
Length = 358
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 94/176 (53%), Gaps = 18/176 (10%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP R R++E F YG DI +K GY F+EFEDYRDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSY------------SSGGSRGVSRRSDYRVLVTG 116
G R+ VE A G R S+ Y S G R++YR++V
Sbjct: 61 ELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGRYNDKSSSRYGPPLRTEYRLIVEN 120
Query: 117 LPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
L S SWQDLKD+MR+AG+V ++ + R G+V++ S DMK AI KLD +E
Sbjct: 121 LSSRVSWQDLKDYMRQAGEVTYADAHKQRRN-EGVVEFASLSDMKTAIEKLDDTEL 175
>gi|28571689|ref|NP_788665.1| B52, isoform A [Drosophila melanogaster]
gi|28571699|ref|NP_788666.1| B52, isoform C [Drosophila melanogaster]
gi|386765710|ref|NP_788667.2| B52, isoform N [Drosophila melanogaster]
gi|21064205|gb|AAM29332.1| AT29232p [Drosophila melanogaster]
gi|23171192|gb|AAF54969.2| B52, isoform A [Drosophila melanogaster]
gi|23171193|gb|AAN13575.1| B52, isoform C [Drosophila melanogaster]
gi|25012274|gb|AAN71250.1| LD30815p [Drosophila melanogaster]
gi|27820026|gb|AAO25044.1| GM10155p [Drosophila melanogaster]
gi|220950988|gb|ACL88037.1| B52-PA [synthetic construct]
gi|220957884|gb|ACL91485.1| B52-PA [synthetic construct]
gi|383292690|gb|AAN13576.2| B52, isoform N [Drosophila melanogaster]
Length = 350
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 94/177 (53%), Gaps = 19/177 (10%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP R R++E F YG DI +K GY F+EFEDYRDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYS-------------SYSSGGSRGVSRRSDYRVLVT 115
G R+ VE A G R S+ + S G R++YR++V
Sbjct: 61 ELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKSSSRYGPPLRTEYRLIVE 120
Query: 116 GLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
L S SWQDLKD+MR+AG+V ++ + R G+V++ S DMK AI KLD +E
Sbjct: 121 NLSSRVSWQDLKDYMRQAGEVTYADAHKQRRN-EGVVEFASLSDMKTAIEKLDDTEL 176
>gi|296412014|ref|XP_002835723.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629512|emb|CAZ79880.1| unnamed protein product [Tuber melanosporum]
Length = 342
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/254 (33%), Positives = 130/254 (51%), Gaps = 15/254 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
LY+GNL D R +EVED F ++G +++K+ G+ F++++ DA+D + G
Sbjct: 10 LYLGNLHKDARKQEVEDFFKEHGSGNVVEIKLMN---GFGFIQYDSEADAKDVVPAYHGR 66
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSR--RSDYRVLVTGLPSSASWQDL 126
+F G L V+ A G R + R+ + G R R R+ +R+ ++GL SWQDL
Sbjct: 67 DFKGQPLTVQFARGSRHNP----RHHDFPGGADRTFPRPRRTAFRMNISGLNPDTSWQDL 122
Query: 127 KDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNA-FSRSYVRVR 184
KD R++G DV FS+V R+R G G+V++ ++DD++ A+ LDR+EF+ S + +
Sbjct: 123 KDFARKSGSDVVFSEVTRERDGR-GMVEFETHDDLRRAVAFLDRTEFKGTQVSCTPDVLA 181
Query: 185 EYDSRRSYS---RSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYSPRGKYSRRS 241
++D R + RS S Y R S +P P S Y SR Y R R
Sbjct: 182 DHDVPRGHGPGRRSVSPRGYGGRRYSPNPSRGYHSPPRHSRRYESPSRGYRERSPRGGRE 241
Query: 242 PSLSPARSASQRSP 255
P + RSP
Sbjct: 242 PYYNGGGGGRDRSP 255
>gi|403290688|ref|XP_003936440.1| PREDICTED: serine/arginine-rich splicing factor 6 [Saimiri
boliviensis boliviensis]
Length = 344
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 100/174 (57%), Gaps = 16/174 (9%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L + R ++++ F YG ++++DLK GY F+EFED RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRH---------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLP 118
G R+ VE A G RR S S +SG + G R++YR++V L
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS 118
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ KLD +E
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 171
>gi|28571691|ref|NP_788668.1| B52, isoform B [Drosophila melanogaster]
gi|7299789|gb|AAF54968.1| B52, isoform B [Drosophila melanogaster]
Length = 329
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 97/182 (53%), Gaps = 24/182 (13%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP R R++E F YG DI +K GY F+EFEDYRDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYS-------------SYSSGGSRGVSR-----RSDY 110
G R+ VE A G R S+ + + SR SR R++Y
Sbjct: 61 ELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPLRTEY 120
Query: 111 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRS 170
R++V L S SWQDLKD+MR+AG+V ++ + R G+V++ S DMK AI KLD +
Sbjct: 121 RLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRN-EGVVEFASLSDMKTAIEKLDDT 179
Query: 171 EF 172
E
Sbjct: 180 EL 181
>gi|390462611|ref|XP_003732879.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 6-like [Callithrix jacchus]
Length = 344
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 100/174 (57%), Gaps = 16/174 (9%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L + R ++++ F YG ++++DLK GY F+EFED RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRH---------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLP 118
G R+ VE A G RR S S +SG + G R++YR++V L
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS 118
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ KLD +E
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 171
>gi|410911524|ref|XP_003969240.1| PREDICTED: uncharacterized protein LOC101080136 isoform 2 [Takifugu
rubripes]
Length = 374
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 93/170 (54%), Gaps = 12/170 (7%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R +VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYRARENDVERFFKGYGKILEVDLK-----NGYGFVEFDDPRDADDAVYDLNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR------GVSRRSDYRVLVTGLPSSAS 122
G R+ VE G RR R G R G R+DYR++V L S S
Sbjct: 59 ELCGERVIVEHTKGPRRDGGYSGRSKPRPGGYGRWGRDRYGPPIRTDYRLIVENLSSRCS 118
Query: 123 WQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
WQDLKD+MR+AG+V ++ + R G++++ Y DMK A+ KLD +E
Sbjct: 119 WQDLKDYMRQAGEVTYADTHKGRKN-EGVIEFRQYSDMKRALEKLDGTEV 167
>gi|367029667|ref|XP_003664117.1| hypothetical protein MYCTH_2306567 [Myceliophthora thermophila ATCC
42464]
gi|347011387|gb|AEO58872.1| hypothetical protein MYCTH_2306567 [Myceliophthora thermophila ATCC
42464]
Length = 296
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 97/178 (54%), Gaps = 16/178 (8%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP +VE F +G I +I L G+ F+E++D DA
Sbjct: 1 MTEVSSTRLYLGNLPRHATKADVEAHFATHGTGEITEIKLMN-----GFGFIEYKDAMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLP 118
D + G +F G RL V+ A G R DR S+ RR+ +R+ +TGLP
Sbjct: 56 RDVVPAFHGSDFMGERLTVQFARGSRHREHGHDRNSAPRP-------RRTPHRMQITGLP 108
Query: 119 SSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNA 175
+ SWQDLKD R++G DV +S+ R+ GG G V++ + D++ A+ KLD EF+N
Sbjct: 109 NDTSWQDLKDFARQSGADVVYSETNRN-GGTEGFVEFETAADLRTAVEKLDGREFKNV 165
>gi|357621499|gb|EHJ73311.1| splicing factor arginine/serine-rich 6 [Danaus plexippus]
Length = 408
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 95/174 (54%), Gaps = 16/174 (9%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP R R++E F +G I DI +K GY F+EFEDYRDA+DA+ +G
Sbjct: 6 VYVGGLPFGVRERDLEKFFKGFGRIRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR----------GVSRRSDYRVLVTGLP 118
G R+ VE A G R + R Y R G R++YR++V L
Sbjct: 61 ELLGERVVVEPARGIDRSADRYRRDRYYERDRGRSRYDDYNYRYGPPTRTEYRLIVENLS 120
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
S SWQDLKD+MR+AG+V ++ + G+V++ ++ DM+ AI KLD +E
Sbjct: 121 SRISWQDLKDYMRQAGEVTYADAHKQHRN-EGVVEFATHSDMRAAIEKLDGTEL 173
>gi|270015083|gb|EFA11531.1| hypothetical protein TcasGA2_TC016051 [Tribolium castaneum]
Length = 303
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 97/181 (53%), Gaps = 23/181 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VG L R R++E F KYG I ++ +K G+AF+EF+DYRDA+DA+ +G
Sbjct: 5 VFVGGLTYRVRERDIEKFFRKYGRIKEVAMK-----NGFAFVEFDDYRDADDAVYELNGK 59
Query: 69 NFDGYRLRVELAHGGRR-----------------HSSSMDRYSSYSSGGSRGVSRRSDYR 111
G R+ VE A G R S +R S G R++YR
Sbjct: 60 ELLGERVSVERARGTPRGCDQWRGSGGRGYGPPRGRSRDNREPDMRSHDRYGPPTRTEYR 119
Query: 112 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSE 171
++V L S SWQDLKD+MR+AG+V ++ + R G+V++ SY DMK AI KLD +E
Sbjct: 120 LIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRN-EGVVEFASYSDMKNAIDKLDDTE 178
Query: 172 F 172
Sbjct: 179 L 179
>gi|225718298|gb|ACO14995.1| Splicing factor, arginine/serine-rich 4 [Caligus clemensi]
Length = 234
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 98/175 (56%), Gaps = 17/175 (9%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
LY+GN+ +TR R+VE F YG + +I LK GY F+EFED+RDA+DA++ DG
Sbjct: 8 LYLGNVSDETRERDVEKFFKGYGKLREIALK-----NGYGFVEFEDHRDADDAVQDLDGK 62
Query: 69 NFDGYRLRVELA------HGGRRHSSSMDRYSSYSSGGSRGVS-----RRSDYRVLVTGL 117
+ +G R+RVE A GG R+ S+ R S + RR+ YR+ V L
Sbjct: 63 DMNGSRVRVEFARSPRDKRGGSRYPSTSSRRSPPRGRRGAPIKRNPPGRRTQYRIRVENL 122
Query: 118 PSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
S ASWQDLKD+ R GD+ ++ + R G+V++ M+ A+ +LD +E
Sbjct: 123 SSRASWQDLKDYFRSCGDITYTNAHKPRNN-EGVVEFGDKRAMENALDRLDDTEL 176
>gi|198452967|ref|XP_001359013.2| GA10599 [Drosophila pseudoobscura pseudoobscura]
gi|198132156|gb|EAL28156.2| GA10599 [Drosophila pseudoobscura pseudoobscura]
Length = 357
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 94/176 (53%), Gaps = 18/176 (10%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP R R++E F YG DI +K GY F+EFEDYRDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSY------------SSGGSRGVSRRSDYRVLVTG 116
G R+ VE A G R S+ Y S G R++YR++V
Sbjct: 61 ELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGRYNDKSSSRYGPPLRTEYRLIVEN 120
Query: 117 LPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
L S SWQDLKD+MR+AG+V ++ + R G+V++ S DMK AI KLD +E
Sbjct: 121 LSSRVSWQDLKDYMRQAGEVTYADAHKQRRN-EGVVEFASLSDMKTAIEKLDDTEL 175
>gi|194741292|ref|XP_001953123.1| GF17608 [Drosophila ananassae]
gi|190626182|gb|EDV41706.1| GF17608 [Drosophila ananassae]
Length = 350
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 94/176 (53%), Gaps = 18/176 (10%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP R R++E F YG DI +K GY F+EFEDYRDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSY------------SSGGSRGVSRRSDYRVLVTG 116
G R+ VE A G R S+ Y S G R++YR++V
Sbjct: 61 ELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGRYNDKSSSRYGPPLRTEYRLIVEN 120
Query: 117 LPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
L S SWQDLKD+MR+AG+V ++ + R G+V++ S DMK AI KLD +E
Sbjct: 121 LSSRVSWQDLKDYMRQAGEVTYADAHKQRRN-EGVVEFASLSDMKTAIEKLDDTEL 175
>gi|196004628|ref|XP_002112181.1| hypothetical protein TRIADDRAFT_23659 [Trichoplax adhaerens]
gi|190586080|gb|EDV26148.1| hypothetical protein TRIADDRAFT_23659 [Trichoplax adhaerens]
Length = 266
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 98/168 (58%), Gaps = 9/168 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG L R R+VE F +G I ++ LK G+ F+EF+D RDAEDAI +
Sbjct: 4 VYVGRLSYRARERDVEHFFRGFGKIREVTLK-----NGFGFVEFDDPRDAEDAIYELNNR 58
Query: 69 NFDGYRLRVELAHGGR---RHSSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
+ G R+ VE A G R R + SY R G R +++R+++ L S A+W+
Sbjct: 59 DLMGERVIVEFAKGTRYDDRRGAYPLITPSYLLFRPRFGRPRNTEWRLVINNLSSRATWR 118
Query: 125 DLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
D+KD+MR+AGDV F+ + G G+VD+ +YDDMK A+++LD +E
Sbjct: 119 DIKDYMRQAGDVTFADAHKQLGEGRGVVDFATYDDMKDALKRLDGTEL 166
>gi|443724659|gb|ELU12563.1| hypothetical protein CAPTEDRAFT_175470 [Capitella teleta]
Length = 321
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 94/181 (51%), Gaps = 23/181 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG L R R++E F YG IVD+ LK GY F+EF+DYRDA+DA+ +G
Sbjct: 5 IYVGRLSYSVRERDIERFFRNYGRIVDVLLK-----NGYGFVEFDDYRDADDAVYELNGK 59
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSY-----------------SSGGSRGVSRRSDYR 111
G R+ +E A G R Y SG G R++YR
Sbjct: 60 ELCGERVVIEHARGPNRKDDRDGGYRDRGDRGGGRGGGRQPGWMDKSGSRYGPPARTEYR 119
Query: 112 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSE 171
++V L S SWQDLKD+MR+AG+V ++ + GIV+++S DMK A+ KLD +E
Sbjct: 120 LVVENLSSRVSWQDLKDYMRQAGEVTYADAHKQHKN-EGIVEFSSRADMKTALEKLDDTE 178
Query: 172 F 172
Sbjct: 179 I 179
>gi|410930984|ref|XP_003978877.1| PREDICTED: uncharacterized protein LOC101068731 [Takifugu rubripes]
Length = 379
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 98/169 (57%), Gaps = 11/169 (6%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R ++++ F YG +++IDLK GY F+EFED RDA+DA+ +G
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGKLMEIDLK-----NGYGFVEFEDNRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSR-----RSDYRVLVTGLPSSASW 123
G R+ VE A G RR S YSS G + R++YR++V L S SW
Sbjct: 59 ELCGERVIVEHARGPRRDRDFYGGGSGYSSRSRTGRDKYGPPVRTEYRLVVENLSSRCSW 118
Query: 124 QDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
QDLKD MR+AG+V ++ ++R G++++ S+ DMK A+ KLD ++
Sbjct: 119 QDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSHSDMKRALDKLDGTDI 166
>gi|327283237|ref|XP_003226348.1| PREDICTED: serine/arginine-rich splicing factor 6-like [Anolis
carolinensis]
Length = 343
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 101/172 (58%), Gaps = 14/172 (8%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R ++++ F YG ++++DLK GY F+EFED RDAEDA+ +G
Sbjct: 4 VYIGRLSYHVREKDLQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDAEDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRH-------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSS 120
+ G R+ VE A G RR S S S +SG + G R++YR++V L S
Sbjct: 59 DLCGERVIVEHARGPRRDRDGYSYSSRSGGYSSRRTSGRDKYGPPVRTEYRLIVENLSSR 118
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ KLD +E
Sbjct: 119 CSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 169
>gi|449296860|gb|EMC92879.1| hypothetical protein BAUCODRAFT_114866 [Baudoinia compniacensis
UAMH 10762]
Length = 326
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 108/204 (52%), Gaps = 17/204 (8%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDAEDAI 62
S+ LY+GNLP + +VE+ F +G I +I L G+ F+E++D DA D +
Sbjct: 12 SNTRLYLGNLPRNATKADVENHFNTHGTGEITEIKLMN-----GFGFIEYKDAMDARDVV 66
Query: 63 RGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSAS 122
G F G RL V+ A GG R D Y+ R RR+ +R+ +TGLP S
Sbjct: 67 PAFHGSEFMGERLVVQFARGGNR---PRDGYNDAPRMAPR--PRRTVHRMTITGLPFETS 121
Query: 123 WQDLKDHMRRAG-DVCFSQVFRDR---GGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSR 178
WQDLKD R++G DV +S+V R+R GG G V+Y + D+ A+ KLD +F+ + R
Sbjct: 122 WQDLKDFARQSGLDVVYSEVARERDASGGGKGFVEYETAQDLASAVEKLDNHDFKGSTVR 181
Query: 179 SYVRVREYDSRRSYSRSPSRSPYY 202
+ + D R R SRSP Y
Sbjct: 182 C-ISDPQADIPRPRERFRSRSPGY 204
>gi|198432077|ref|XP_002131581.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 4
(Pre-mRNA-splicing factor SRP75) (SRP001LB) [Ciona
intestinalis]
Length = 332
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 96/190 (50%), Gaps = 28/190 (14%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
S R ++VG L R ++E F +G I DI++K G+ F+EF+D RDA+DA+
Sbjct: 2 SGRRIFVGRLSYRAREGDIERFFKGFGRITDINIK-----NGFCFVEFDDSRDADDAVYE 56
Query: 65 RDGYNFDGYRLRVELAHGGRR-------------HSSSMDRYSSYSSGGSRGVSRR---- 107
+ G R+ VELA G +R + RG RR
Sbjct: 57 MNNQMLCGERVTVELAKGTQRWGQERRDYGGGRDYGRGDYGGGYGGRNNDRGFGRRQSKF 116
Query: 108 -----SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 162
++YRV+V L + +WQ+LKDH+R+AG++ ++ + R G+VD+ SYDDMK
Sbjct: 117 APPMRTEYRVIVENLSTRVAWQELKDHLRQAGEITYADAHKHRRN-EGVVDFASYDDMKN 175
Query: 163 AIRKLDRSEF 172
AI K + +E
Sbjct: 176 AIEKFNNTEL 185
>gi|442749577|gb|JAA66948.1| Putative alternative splicing factor srp55/b52/srp75 rrm
superfamily [Ixodes ricinus]
Length = 268
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 109/194 (56%), Gaps = 24/194 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G+L R ++++ F YG + DI LK G+ F+EF+D+RDA+DAI +G
Sbjct: 5 VFIGHLSCQVREKDLDKFFKGYGRVGDIHLK-----NGFGFVEFDDHRDADDAISDLNGK 59
Query: 69 NFDGYRLRVELAHGGRR-----------HSSSMDRYSSYSSGGSR-GVSRRSDYRVLVTG 116
G R+ VELA+G RR S ++ +R G +R++Y+++V
Sbjct: 60 ELLGERVSVELAYGSRRGPGGRIVPPRPDWRSPPPRRPFAPRDTRFGPPQRTEYQLIVEN 119
Query: 117 LPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAF 176
L S SWQDLKD+MR+AG+V ++ + R G+V++ +Y DMK AI KLD ++
Sbjct: 120 LSSHVSWQDLKDYMRQAGEVTYADAHKIRPN-EGVVEFANYSDMKNAISKLDNTDL---- 174
Query: 177 SRSYVRVREYDSRR 190
S R+R Y+ ++
Sbjct: 175 --SGRRIRLYEEKK 186
>gi|225712276|gb|ACO11984.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
Length = 329
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 95/185 (51%), Gaps = 18/185 (9%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M SR +++GNLP R R++E F +YG + +I +K Y F EF+DYRDA+D
Sbjct: 1 MPSREGCRVFLGNLPYSVRERDIERFFERYGRVYNIFIK----SGKYGFCEFDDYRDADD 56
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSR-------------R 107
A+ +G + R+ VE A GGRR S G R R
Sbjct: 57 AVYKLNGCELNSERITVEHARGGRRAEGRSSGGSGGGGGYRGDRYRGRRGGRGKYGPPTR 116
Query: 108 SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKL 167
++YRV+V L + SWQDLKD MRRAG+V F+ D+ G+V++ S DM+ AI K
Sbjct: 117 TNYRVIVENLSTRVSWQDLKDVMRRAGEVTFADAHNDKRN-EGVVEFISRRDMERAIDKF 175
Query: 168 DRSEF 172
D E
Sbjct: 176 DNHEL 180
>gi|302690366|ref|XP_003034862.1| hypothetical protein SCHCODRAFT_84382 [Schizophyllum commune H4-8]
gi|300108558|gb|EFI99959.1| hypothetical protein SCHCODRAFT_84382 [Schizophyllum commune H4-8]
Length = 292
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 93/174 (53%), Gaps = 14/174 (8%)
Query: 2 SSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDA 61
S+ R LY+G LP DT +V+ F YG +VD + G+ F+E+E +DAEDA
Sbjct: 4 SATMGRRLYLGKLPPDTAPEDVKKTFGAYGTVVDCRVMT-----GFGFIEYESSKDAEDA 58
Query: 62 IRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRR--SDYRVLVTGLPS 119
+ +G F+G + VE A R +R Y G RR +RVLVTG+
Sbjct: 59 VNEMNGKTFNGNSIAVEFARENRPRREPYERDREY------GAPRRRPGGFRVLVTGVSR 112
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
SWQDLKD R AG V F+ + RD G G+++Y S DD +A+R LDR + R
Sbjct: 113 DTSWQDLKDFGREAGSVTFADIDRDVPGQ-GVLEYMSRDDADHAVRYLDRRDLR 165
>gi|346468607|gb|AEO34148.1| hypothetical protein [Amblyomma maculatum]
Length = 338
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 104/177 (58%), Gaps = 18/177 (10%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M+SR +YVG L + R R++E F +G I +I +K G+ F+EF+D+RDA+D
Sbjct: 1 MTSR----VYVGRLNYEVRERDLERFFKGFGRIREISIK-----NGFGFVEFDDHRDADD 51
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGS-----RGVSRRSDYRVLVT 115
A+ +G G R+ VELA G RR + D Y S ++ S G R++Y++ V
Sbjct: 52 AVYELNGKELLGDRVSVELARGIRRGA---DYYRSRAASRSPPRRRYGPPTRTEYQLTVE 108
Query: 116 GLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
L S SWQDLKD+MR+AG+V ++ R R G+V++ +Y DMK A+ KLD ++
Sbjct: 109 NLSSRVSWQDLKDYMRQAGEVTYADAHRLRRN-EGVVEFATYSDMKNALEKLDNTDL 164
>gi|294950021|ref|XP_002786421.1| Serine-arginine protein, putative [Perkinsus marinus ATCC 50983]
gi|239900713|gb|EER18217.1| Serine-arginine protein, putative [Perkinsus marinus ATCC 50983]
Length = 317
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 109/215 (50%), Gaps = 42/215 (19%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPP------RPPGYAFLEFEDYRDAEDAI 62
+ V N+P + R RE++D+FYK+G I I+++ R YA+++F D++DA DA
Sbjct: 4 IVVSNIPSNLRERELDDIFYKFGRIESIEIRGARINESSRRRTAYAYVQFRDWQDAADAA 63
Query: 63 RGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSG----------------------- 99
+ R+GY DG + VE+ R D Y+ G
Sbjct: 64 KSRNGYEIDGQPITVEVDSDSRD-----DSRGPYAKGKGKGGRYDDYGGGYGKGGSGSPL 118
Query: 100 ---GSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTS 156
S G+S YRV+VT LP ASWQDLKD MR AG+ F++V RD G+ G +
Sbjct: 119 GFYDSMGMSENY-YRVVVTNLPRGASWQDLKDRMRDAGECRFTEVTRDGVGVAG---FAG 174
Query: 157 YDDMKYAIRKLDRSEFRNAFS-RSYVRVREYDSRR 190
D++ A+R LD +E ++ F S +RV E++ +
Sbjct: 175 QSDVERAVRTLDDTEMKSHFGDTSIIRVEEFNEEK 209
>gi|348510431|ref|XP_003442749.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Oreochromis
niloticus]
Length = 342
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 98/173 (56%), Gaps = 15/173 (8%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG L R ++++ F YG +++IDLK GY F+EFED RDA+DA+ +G
Sbjct: 4 VYVGKLSYHVREKDIQRFFSGYGKLLEIDLK-----NGYGFVEFEDMRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRR-------HSSSMDRYSSYSSGG--SRGVSRRSDYRVLVTGLPS 119
G R+ +E A G RR H YSS++ G G R+++R++V L S
Sbjct: 59 ELCGERVVIEHARGPRRDGYGYGGHQGDGGGYSSWNRTGRDKYGPPVRTEHRLIVENLSS 118
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
SWQDLKD MR+AG+V ++ + R G++++ S DMK A+ KLD ++
Sbjct: 119 RCSWQDLKDFMRQAGEVTYADAHKGRAN-EGVIEFRSRSDMKRALEKLDGTDI 170
>gi|289739639|gb|ADD18567.1| arginine/serine-rich 6 splicing factor [Glossina morsitans
morsitans]
Length = 346
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 96/181 (53%), Gaps = 23/181 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP R R++E F YG DI +K GY F+EFEDYRDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSM-----------------DRYSSYSSGGSRGVSRRSDYR 111
G R+ VE A G R S+ D+ + S G R++YR
Sbjct: 61 ELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGRYNDKNKNSRSSSRYGPPLRTEYR 120
Query: 112 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSE 171
++V L S SWQDLKD+MR+AG+V ++ + R G+V++ S DMK AI KLD ++
Sbjct: 121 LIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRN-EGVVEFASLSDMKTAIEKLDDTD 179
Query: 172 F 172
Sbjct: 180 L 180
>gi|348563835|ref|XP_003467712.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 6-like [Cavia porcellus]
Length = 341
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 100/174 (57%), Gaps = 16/174 (9%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L + R ++++ F YG ++++DLK GY F+EFED RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRH---------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLP 118
G R+ VE A G RR S S +SG + G R++YR++V L
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS 118
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ KLD +E
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 171
>gi|428182228|gb|EKX51089.1| hypothetical protein GUITHDRAFT_161608 [Guillardia theta CCMP2712]
Length = 258
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 95/175 (54%), Gaps = 25/175 (14%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG+L R R+++D F ++G I DI LK G+AF+E++ DAE A+R DG
Sbjct: 7 VYVGHLSSRVRERDLDDEFSRFGKIRDISLK-----QGFAFVEYDHSEDAEYAVRKMDGV 61
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
N +G R+ VE A G RG S YR+ L + SWQDLKD
Sbjct: 62 NLEGMRILVEFA-------------KETPKRGPRGGS---GYRIYAENLSQNTSWQDLKD 105
Query: 129 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRV 183
R+AG V ++ VF +RG G+++Y + +DM+ A+ KLD +E RS VR+
Sbjct: 106 FARKAGKVIYTDVFSERGEKLGVIEYATREDMEDALYKLDGTELH----RSKVRL 156
>gi|294890805|ref|XP_002773323.1| arginine/serine-rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239878375|gb|EER05139.1| arginine/serine-rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 317
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 108/207 (52%), Gaps = 33/207 (15%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPP------RPPGYAFLEFEDYRDAEDAI 62
+ V N+P R RE++D+FYK+G I I+++ R YA+++F D++DA DA
Sbjct: 4 IVVSNIPSTLRERELDDIFYKFGRIESIEIRGARINESSRRRTAYAYVQFRDWQDAADAA 63
Query: 63 RGRDGYNFDGYRLRVELAHGGRRHSSSM----------------------DRYSSYSSGG 100
+ R+GY DG + VE+ R S S+ S +
Sbjct: 64 KSRNGYEIDGQPITVEVDGDYRDDSRSIPSKGKGKGGGRYGDYGGGYGKGGSGSPSAGYD 123
Query: 101 SRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDM 160
S G+S + YRV+VT LP ASWQDLKD MR AG+ F++V RD G+ G + D+
Sbjct: 124 SMGMSEKY-YRVVVTNLPRGASWQDLKDKMRDAGECRFTEVTRDGVGVAG---FAGQSDV 179
Query: 161 KYAIRKLDRSEFRNAF-SRSYVRVREY 186
+ A+R LD +E ++ F S +RV E+
Sbjct: 180 ERAVRTLDDTEMKSHFGDTSIIRVEEF 206
>gi|402882500|ref|XP_003904778.1| PREDICTED: serine/arginine-rich splicing factor 6 [Papio anubis]
gi|380815566|gb|AFE79657.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
gi|380815568|gb|AFE79658.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
gi|383420733|gb|AFH33580.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
gi|383420735|gb|AFH33581.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
gi|384948770|gb|AFI37990.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
gi|384948772|gb|AFI37991.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
Length = 343
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 100/174 (57%), Gaps = 16/174 (9%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L + R ++++ F YG ++++DLK GY F+EFED RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRH---------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLP 118
G R+ VE A G RR S S +SG + G R++YR++V L
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS 118
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ KLD +E
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 171
>gi|195390405|ref|XP_002053859.1| GJ24113 [Drosophila virilis]
gi|194151945|gb|EDW67379.1| GJ24113 [Drosophila virilis]
Length = 347
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 94/176 (53%), Gaps = 18/176 (10%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP R R++E F YG DI +K GY F+EFEDYRDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSY------------SSGGSRGVSRRSDYRVLVTG 116
G R+ VE A G R S+ Y S G R++YR++V
Sbjct: 61 ELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGRYNDKSSSRYGPPLRTEYRLIVEN 120
Query: 117 LPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
L S SWQDLKD+MR+AG+V ++ + R G+V++ S DMK AI KLD +E
Sbjct: 121 LSSRVSWQDLKDYMRQAGEVTYADAHKQRRN-EGVVEFASLSDMKTAIEKLDDTEL 175
>gi|56270156|gb|AAH87121.1| Splicing factor, arginine/serine-rich 6 [Rattus norvegicus]
Length = 339
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 109/196 (55%), Gaps = 24/196 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L + R ++++ F YG +++IDLK GY F+EFED RDA+DA+ +
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNSK 58
Query: 69 NFDGYRLRVELAHGGRRH---------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLP 118
G R+ VE A G RR S S +SG + G R++YR++V L
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS 118
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF--RNAF 176
S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ KLD +E RN
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDKLDGTEINGRN-- 175
Query: 177 SRSYVRVREYDSRRSY 192
+R+ EY R S+
Sbjct: 176 ----IRLIEYKPRTSH 187
>gi|355564745|gb|EHH21245.1| hypothetical protein EGK_04262, partial [Macaca mulatta]
Length = 159
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/129 (49%), Positives = 83/129 (64%), Gaps = 10/129 (7%)
Query: 56 RDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVT 115
RDAEDAI GR+GY++ LRVE + R G + +RRSD+RVLV+
Sbjct: 1 RDAEDAIYGRNGYDYGQCWLRVEFPR------TYGGRGGWPRGGRNGPPTRRSDFRVLVS 54
Query: 116 GLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-N 174
GLP S SWQDLKDHMR AGDVC++ V +D GM V+Y +DM+YA+RKLD ++FR +
Sbjct: 55 GLPPSGSWQDLKDHMREAGDVCYADVQKDGVGM---VEYLRKEDMEYALRKLDDTKFRSH 111
Query: 175 AFSRSYVRV 183
SY+RV
Sbjct: 112 EGETSYIRV 120
>gi|62087532|dbj|BAD92213.1| arginine/serine-rich splicing factor 6 variant [Homo sapiens]
Length = 279
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 100/174 (57%), Gaps = 16/174 (9%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L + R ++++ F YG ++++DLK GY F+EFED RDA+DA+ +G
Sbjct: 38 VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 92
Query: 69 NFDGYRLRVELAHGGRRH---------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLP 118
G R+ VE A G RR S S +SG + G R++YR++V L
Sbjct: 93 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS 152
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ KLD +E
Sbjct: 153 SRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 205
>gi|30584231|gb|AAP36364.1| Homo sapiens splicing factor, arginine/serine-rich 6 [synthetic
construct]
gi|61371415|gb|AAX43663.1| splicing factor arginine/serine-rich 6 [synthetic construct]
gi|61371422|gb|AAX43664.1| splicing factor arginine/serine-rich 6 [synthetic construct]
Length = 345
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 100/174 (57%), Gaps = 16/174 (9%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L + R ++++ F YG ++++DLK GY F+EFED RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRH---------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLP 118
G R+ VE A G RR S S +SG + G R++YR++V L
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS 118
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ KLD +E
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 171
>gi|74226809|dbj|BAE27050.1| unnamed protein product [Mus musculus]
Length = 339
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 99/174 (56%), Gaps = 16/174 (9%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L + R ++++ F YG +++IDLK GY F+EFED RDA+DA+ +
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNSK 58
Query: 69 NFDGYRLRVELAHGGRRH---------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLP 118
G R+ VE A G RR S S +SG + G R++YR++V L
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS 118
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ KLD +E
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 171
>gi|158255842|dbj|BAF83892.1| unnamed protein product [Homo sapiens]
Length = 344
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 100/174 (57%), Gaps = 16/174 (9%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L + R ++++ F YG ++++DLK GY F+EFED RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRH---------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLP 118
G R+ VE A G RR S S +SG + G R++YR++V L
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS 118
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ KLD +E
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 171
>gi|403281819|ref|XP_003932372.1| PREDICTED: serine/arginine-rich splicing factor 9 [Saimiri
boliviensis boliviensis]
Length = 155
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 93/156 (59%), Gaps = 11/156 (7%)
Query: 48 AFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRR 107
A + F+ +DAEDAI GR+GY++ RLRVE + R G + +RR
Sbjct: 9 AIVVFQ--QDAEDAIYGRNGYDYGQCRLRVEFPR------TYGGRGGWPRGGRNGPPTRR 60
Query: 108 SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKL 167
SD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D GM V+Y +DM+YA+RKL
Sbjct: 61 SDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDGVGM---VEYLRKEDMEYALRKL 117
Query: 168 DRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYS 203
D ++FR+ S ++DS Y + + Y +
Sbjct: 118 DDTKFRSHEESSCCFGSQFDSSGDYPFGTTETRYQT 153
>gi|359322750|ref|XP_003639908.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 1 [Canis
lupus familiaris]
Length = 344
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 100/174 (57%), Gaps = 16/174 (9%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L + R ++++ F YG +++IDLK GY F+EFED RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRH---------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLP 118
G R+ VE A G RR S S +SG + G R+++R++V L
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEFRLIVENLS 118
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ KLD +E
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 171
>gi|169404002|ref|NP_955868.1| serine/arginine-rich splicing factor 4 [Danio rerio]
gi|326676581|ref|XP_003200617.1| PREDICTED: hypothetical protein LOC321872 [Danio rerio]
gi|28461393|gb|AAH46895.1| Zgc:55809 [Danio rerio]
gi|182890456|gb|AAI64410.1| Zgc:55809 protein [Danio rerio]
Length = 366
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 96/171 (56%), Gaps = 13/171 (7%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG L R ++VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYVGKLSYRAREKDVERFFKGYGKILEVDLK-----NGYGFVEFDDPRDADDAVYDLNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSR-------RSDYRVLVTGLPSSA 121
+ G R+ VE G RR + S+ G G R+DYR++V L S
Sbjct: 59 DLCGKRVIVEHTIGQRRDGGNRSGRSNRYGRGGGGGGGDRYGPPTRTDYRLIVENLSSRC 118
Query: 122 SWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
SWQDLKD+MR+AG+V ++ + R G++++ Y DMK A+ KLD +E
Sbjct: 119 SWQDLKDYMRQAGEVTYADTNKGRKN-EGVIEFRQYSDMKRALEKLDGTEV 168
>gi|20127499|ref|NP_006266.2| serine/arginine-rich splicing factor 6 [Homo sapiens]
gi|307078161|ref|NP_001182497.1| splicing factor, arginine/serine-rich 6 [Pongo abelii]
gi|332209067|ref|XP_003253632.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 1
[Nomascus leucogenys]
gi|397511164|ref|XP_003825949.1| PREDICTED: serine/arginine-rich splicing factor 6 [Pan paniscus]
gi|426391709|ref|XP_004062210.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 1
[Gorilla gorilla gorilla]
gi|20981728|sp|Q13247.2|SRSF6_HUMAN RecName: Full=Serine/arginine-rich splicing factor 6; AltName:
Full=Pre-mRNA-splicing factor SRP55; AltName:
Full=Splicing factor, arginine/serine-rich 6
gi|13905094|gb|AAH06832.1| Splicing factor, arginine/serine-rich 6 [Homo sapiens]
gi|119596370|gb|EAW75964.1| splicing factor, arginine/serine-rich 6, isoform CRA_a [Homo
sapiens]
gi|119596373|gb|EAW75967.1| splicing factor, arginine/serine-rich 6, isoform CRA_a [Homo
sapiens]
Length = 344
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 100/174 (57%), Gaps = 16/174 (9%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L + R ++++ F YG ++++DLK GY F+EFED RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRH---------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLP 118
G R+ VE A G RR S S +SG + G R++YR++V L
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS 118
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ KLD +E
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 171
>gi|410215040|gb|JAA04739.1| serine/arginine-rich splicing factor 6 [Pan troglodytes]
gi|410302392|gb|JAA29796.1| serine/arginine-rich splicing factor 6 [Pan troglodytes]
gi|410360346|gb|JAA44682.1| serine/arginine-rich splicing factor 6 [Pan troglodytes]
Length = 344
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 100/174 (57%), Gaps = 16/174 (9%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L + R ++++ F YG ++++DLK GY F+EFED RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRH---------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLP 118
G R+ VE A G RR S S +SG + G R++YR++V L
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS 118
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ KLD +E
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 171
>gi|116175261|ref|NP_001070685.1| serine/arginine-rich splicing factor 6 [Sus scrofa]
gi|115371751|gb|ABI96200.1| SFRS6 [Sus scrofa]
Length = 345
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 100/174 (57%), Gaps = 16/174 (9%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L + R ++++ F YG +++IDLK GY F+EFED RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRH---------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLP 118
G R+ VE A G RR S S +SG + G R+++R++V L
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEFRLIVENLS 118
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ KLD +E
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 171
>gi|290562251|gb|ADD38522.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
Length = 331
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 96/187 (51%), Gaps = 20/187 (10%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M SR +++GNLP R R++E F +YG + +I +K Y F EF+DYRDA+D
Sbjct: 1 MPSREGCRVFLGNLPYSVRERDIERFFERYGRVYNIFIK----SGKYGFCEFDDYRDADD 56
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSR-------------- 106
A+ +G + R+ VE A GGRR S GG R
Sbjct: 57 AVYKLNGCELNSERITVEHARGGRRAEGRSSGGSGGGGGGGYRGDRYRGRGGGRGKYGPP 116
Query: 107 -RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIR 165
R++YRV+V L + SWQDLKD MRRAG+V F+ D+ G+V++ S DM+ AI
Sbjct: 117 TRTNYRVIVENLSTRVSWQDLKDVMRRAGEVTFADAHNDKRN-EGVVEFISRRDMERAID 175
Query: 166 KLDRSEF 172
K D E
Sbjct: 176 KFDNHEL 182
>gi|392870838|gb|EJB12075.1| pre-RNA splicing factor Srp2, variant [Coccidioides immitis RS]
Length = 399
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 115/232 (49%), Gaps = 39/232 (16%)
Query: 21 REVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVE 78
++VE+ F ++G I DI L G+ F+E+ED DA D + G +F G RL V+
Sbjct: 118 QDVEEHFNQHGSGKITDIKLMS-----GFGFIEYEDALDARDVVPAYHGTDFKGSRLTVQ 172
Query: 79 LAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVC 137
A G R + +S S + RR+ YR+ ++GLP + SWQDLKD R++G DV
Sbjct: 173 FARGPRHKET----FSGPSDRSNAPRPRRTPYRMQISGLPET-SWQDLKDFARQSGLDVV 227
Query: 138 FSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPS 197
+S+ RD G G V++ + D+K AI KLD EF+ + ++ D R P
Sbjct: 228 YSETLRDHEG-RGFVEFETGADLKTAIEKLDGREFKGSRVTCTQDIQAPDDR------PV 280
Query: 198 RSPYYSRSRSRSPYYSRSRSPSRSWSYSPRS-------RSYSPRGKYSRRSP 242
R PY RSRSP R Y P R YSPRG Y RSP
Sbjct: 281 RDPY------------RSRSPVRRGGYPPMDDYDRRPPRGYSPRGHYRERSP 320
>gi|328714675|ref|XP_003245425.1| PREDICTED: serine-arginine protein 55-like isoform 2 [Acyrthosiphon
pisum]
Length = 309
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 96/181 (53%), Gaps = 23/181 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G+LP R R+V+ F +G I +I LK GY F+EF+DYRDA+DA+ +G
Sbjct: 7 IYIGHLPYGVRERDVKKFFKGFGRIKEILLK-----NGYGFIEFDDYRDADDAVYELNGR 61
Query: 69 NFDGYRLRVELAHGGRRHSS-----------------SMDRYSSYSSGGSRGVSRRSDYR 111
+G R+ VE A G R S R + G R++YR
Sbjct: 62 ELNGERVSVERARGTPRGSDVWRGSGRGGDLPPPPPRRPRRDARDDRNDRYGPPTRTNYR 121
Query: 112 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSE 171
++V L S SWQDLKD MR+AG+V ++ + R G+V++ SY D+K A+ KLD +E
Sbjct: 122 LIVENLSSRVSWQDLKDFMRQAGEVTYADAHKQRKN-EGVVEFASYSDLKTALDKLDDTE 180
Query: 172 F 172
Sbjct: 181 L 181
>gi|213401865|ref|XP_002171705.1| pre-mRNA-splicing factor srp2 [Schizosaccharomyces japonicus
yFS275]
gi|211999752|gb|EEB05412.1| pre-mRNA-splicing factor srp2 [Schizosaccharomyces japonicus
yFS275]
Length = 375
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 92/161 (57%), Gaps = 15/161 (9%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
L++G LP +VED F YG I+D L G+ FLE E+ RDA D + DG
Sbjct: 6 LFIGRLPSQAAREDVEDFFKGYGRILDCKLMN-----GFGFLELENPRDARDIVN--DGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLK 127
F G R+ VE A G RR R ++ G ++ RR+ YR++V L SWQDLK
Sbjct: 59 EFMGERIIVEPARGERR------RRDTFRDGAAKYPRPRRTGYRLIVENLAEDVSWQDLK 112
Query: 128 DHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLD 168
D MR+AG+ F+ R++ G TG+V++++ DDMK+A+ L+
Sbjct: 113 DVMRKAGEPTFTDAHREQRG-TGVVEFSTEDDMKHALDTLN 152
>gi|45120092|ref|NP_957161.1| serine/arginine-rich splicing factor 5a [Danio rerio]
gi|37681945|gb|AAQ97850.1| splicing factor, arginine/serine-rich 5 [Danio rerio]
Length = 259
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 94/175 (53%), Gaps = 17/175 (9%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R R+VE F YG I +I+LK G+ F+EF+DYRDA+DA+ +G
Sbjct: 6 VFIGRLSPHARERDVEKFFKGYGRIREINLK-----NGFGFVEFDDYRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS----------SGGSR-GVSRRSDYRVLVTGL 117
R+ +E A R +S SGGSR G R+++R++V L
Sbjct: 61 ELCSERVTIEHARSRRGRGGGPGMGGRFSPRFGGYRQSRSGGSRYGPPVRTEHRIIVENL 120
Query: 118 PSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
S SWQDLKD MR+ G+V F R + G+V++ S+ DMK AI KLD ++
Sbjct: 121 SSRISWQDLKDLMRKVGEVTFVDAHRTKKN-EGVVEFASHSDMKNAIEKLDGTDL 174
>gi|289740685|gb|ADD19090.1| serine-arginine protein 55 [Glossina morsitans morsitans]
Length = 351
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 95/182 (52%), Gaps = 24/182 (13%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP R R++E F YG DI +K GY F+EFEDYRDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSM------------------DRYSSYSSGGSRGVSRRSDY 110
G R+ VE A G R S D+ + S G R++Y
Sbjct: 61 ELLGERVVVEPARGTARGSHRDRYGDDRYGGRRGGGGRYNDKNKNSRSSSRYGPPLRTEY 120
Query: 111 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRS 170
R++V L S SWQDLKD+MR+AG+V ++ + R G+V++ S DMK AI KLD +
Sbjct: 121 RLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRN-EGVVEFASLSDMKTAIEKLDDT 179
Query: 171 EF 172
+
Sbjct: 180 DL 181
>gi|296481070|tpg|DAA23185.1| TPA: splicing factor, arginine/serine-rich 6 [Bos taurus]
Length = 345
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 100/174 (57%), Gaps = 16/174 (9%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L + R ++++ F YG +++IDLK GY F+EFED RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRH---------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLP 118
G R+ VE A G RR S S +SG + G R+++R++V L
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEFRLIVENLS 118
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ KLD +E
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 171
>gi|327280352|ref|XP_003224916.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Anolis
carolinensis]
Length = 261
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 95/169 (56%), Gaps = 11/169 (6%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VG L R R+VE F YG I +I+LK G+ F+EFED+RDA+DA+ +G
Sbjct: 6 VFVGRLSPHARERDVEKFFKGYGRIREINLK-----NGFGFVEFEDHRDADDAVYELNGK 60
Query: 69 NFDGYRLRVE----LAHGGRRHSSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASW 123
R+ +E G R+S Y SY G S+ G R+++R++V L S SW
Sbjct: 61 ELCNERVTIEHARARRGGRGRYSQRFSYYQSYGGGSSQYGPPLRTEHRLIVENLSSRVSW 120
Query: 124 QDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
QDLKD MR+AG+V F R+ G+V++ S DMK A+ KLD SE
Sbjct: 121 QDLKDFMRKAGEVTFVDAHRNNPN-EGVVEFASSSDMKSAMDKLDGSEL 168
>gi|225718228|gb|ACO14960.1| Serine-arginine protein 55 [Caligus clemensi]
Length = 355
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 97/180 (53%), Gaps = 12/180 (6%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M SR +++GNLP R R++E F +YG + +I +K Y F EF+DYRDA+D
Sbjct: 1 MPSREGSRVFLGNLPYSVRERDIERFFERYGRVYNIFIK----SGKYGFCEFDDYRDADD 56
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSR-------RSDYRVL 113
A+ +G +G R+ VE A GGRR + + G R R++YRV+
Sbjct: 57 AVYKLNGGELNGERITVEHARGGRRAEGRGGGFRGDRNRGRGVGGRGKYGPPTRTNYRVI 116
Query: 114 VTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
V L S SWQDLKD MRRAG+V F+ DR G+V++ S DM AI K D E +
Sbjct: 117 VENLSSRVSWQDLKDVMRRAGEVTFADAHNDRRN-EGVVEFISRRDMDRAIEKFDNHELQ 175
>gi|345571438|gb|EGX54252.1| hypothetical protein AOL_s00004g285 [Arthrobotrys oligospora ATCC
24927]
Length = 377
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/252 (35%), Positives = 126/252 (50%), Gaps = 36/252 (14%)
Query: 9 LYVGNLP--GDTRM------------------REVEDLFYKYGPIVDIDLKIPPRPPGYA 48
LY+GNLP G +R ++VED F K+G ++K+ G+
Sbjct: 6 LYLGNLPRTGKSRFLHAIQLVYLCPFVSTATKKDVEDFFVKHGHGTIQEIKLMN---GFG 62
Query: 49 FLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRS 108
F+E+ + DA D + G F RL V+ A G R + + SG RR+
Sbjct: 63 FIEYSNPSDARDIVPIFHGKEFMDSRLTVQFARGPRPTRNDF----NGPSGDRTPRPRRT 118
Query: 109 DYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKL 167
YR+ ++GLP+ SWQDLKD R++G DV FS+V R+R G +GIV++ + DD++ AI KL
Sbjct: 119 PYRMNISGLPTDTSWQDLKDFARKSGVDVVFSEVSRNRDG-SGIVEFETADDLRIAINKL 177
Query: 168 DRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPR 227
D +F+ S ++ + R SRSP P R SP R SP R YSP
Sbjct: 178 DNYDFKGG-RVSCTSDQQARNSRGRSRSP---PPAGRRNGYSPREGRGYSPGRRGGYSPH 233
Query: 228 ---SRSYSPRGK 236
R YSPRG+
Sbjct: 234 RGGDRGYSPRGR 245
>gi|347972223|ref|XP_315232.3| AGAP004592-PA [Anopheles gambiae str. PEST]
gi|347972225|ref|XP_003436861.1| AGAP004592-PH [Anopheles gambiae str. PEST]
gi|333469344|gb|EAA10559.4| AGAP004592-PA [Anopheles gambiae str. PEST]
gi|333469351|gb|EGK97262.1| AGAP004592-PH [Anopheles gambiae str. PEST]
Length = 345
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 95/174 (54%), Gaps = 16/174 (9%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP R R++E F YG DI +K GY F+EFEDYRDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSS---------SMDRYSSYSSGGSR-GVSRRSDYRVLVTGLP 118
G R+ VE A G R S R Y SR G R++YR++V L
Sbjct: 61 ELLGERVVVEPARGTARGPSGYRERDRYDRDRRGGRYDKNSSRYGPPLRTEYRLVVENLS 120
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
+ SWQDLKD+MR+AG+V ++ + R G+V++ + DMK AI KLD +E
Sbjct: 121 TRVSWQDLKDYMRQAGEVTYADAHKQRKN-EGVVEFATLSDMKTAIEKLDDTEL 173
>gi|431894401|gb|ELK04201.1| Splicing factor, arginine/serine-rich 6 [Pteropus alecto]
Length = 343
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 100/174 (57%), Gaps = 16/174 (9%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R ++++ F YG +++IDLK GY F+EFED RDA+DA+ +G
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRH---------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLP 118
+ G R+ VE A G RR S S +SG + G R+++R++V L
Sbjct: 59 DLCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEFRLIVENLS 118
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ KLD +E
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 171
>gi|121705498|ref|XP_001271012.1| pre-RNA splicing factor Srp2, putative [Aspergillus clavatus NRRL
1]
gi|119399158|gb|EAW09586.1| pre-RNA splicing factor Srp2, putative [Aspergillus clavatus NRRL
1]
Length = 296
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 133/260 (51%), Gaps = 41/260 (15%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP + +++E+ F +G I +I L G+ F+E+ED DA
Sbjct: 1 MTEVSSTRLYLGNLPRNVTKQDIEEHFSSHGSGKITEIKLMN-----GFGFIEYEDAMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSS---SMDRYSSYSSGGSRGVSRRSDYRVLVT 115
D + DG +F G RL V+ A G RR + MDR + RR+ +R+L++
Sbjct: 56 RDVVP--DGSDFKGERLTVQFARGPRRKENFPGPMDR-------PNMPRPRRTVFRMLIS 106
Query: 116 GLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRN 174
GLP + SWQDLKD R++G DV +S+ R+ G G V++ + D+K A+ KLD +F+
Sbjct: 107 GLPET-SWQDLKDFARQSGLDVVYSETGREPG--RGFVEFETAADLKTAVDKLDGRDFKG 163
Query: 175 AFSRSYVRVREYDSRRS----YSRSPSRS--PY------YSRSRSRSPYYSRSRSPSRSW 222
+ ++ +D R SRSP RS P + R SP + R RSP
Sbjct: 164 SRVSCIADIQSHDDRALRDPYRSRSPRRSYPPMEEYDRRFPAPRGYSPRHYRERSP---- 219
Query: 223 SYSPRSRSYSPRGKYSRRSP 242
P R Y R Y RRSP
Sbjct: 220 --VPVRREYYERDGYGRRSP 237
>gi|401412768|ref|XP_003885831.1| Function: human SRp75 can complement a splicing-deficient extract,
related [Neospora caninum Liverpool]
gi|325120251|emb|CBZ55805.1| Function: human SRp75 can complement a splicing-deficient extract,
related [Neospora caninum Liverpool]
Length = 353
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 99/187 (52%), Gaps = 16/187 (8%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G+LPG+ ++VE F K+G IV ++ K GY FLE+ D RDA DAI G
Sbjct: 17 IYIGSLPGEYTEKDVEREFEKFGKIVKLEFKRTVSGAGYCFLEYADPRDARDAIAQLHGR 76
Query: 69 NFDGYR----LRVE--LAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSAS 122
G+R LRVE LA GR S D +G RR + + V GLP S S
Sbjct: 77 PPPGFRDAAPLRVEIPLARSGRTDGFSDDAMPRGLAG------RRGRFVLEVRGLPPSGS 130
Query: 123 WQDLKDHMRRAGDVCFSQVFRDRGG---MTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSR 178
WQDLKDH R GDV F++V +D + G V + S DM AI LD S FR + +
Sbjct: 131 WQDLKDHFRGIGDVGFAEVRKDPDAPDSVMGKVSFFSKRDMMEAIEALDGSTFRSHEGEK 190
Query: 179 SYVRVRE 185
S + VRE
Sbjct: 191 SRITVRE 197
>gi|338721826|ref|XP_001500325.3| PREDICTED: serine/arginine-rich splicing factor 4 [Equus caballus]
Length = 497
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 91/153 (59%), Gaps = 10/153 (6%)
Query: 24 EDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGG 83
+D YG I+++DLK GY F+EF+D RDA+DA+ +G + G R+ VE A G
Sbjct: 15 QDNTMGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGP 69
Query: 84 RRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFS 139
RR S S Y SG + G R++YR++V L S SWQDLKD+MR+AG+V ++
Sbjct: 70 RRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYA 129
Query: 140 QVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
+ R G++++ SY DMK A+ KLD +E
Sbjct: 130 DAHKGRKN-EGVIEFVSYSDMKRALEKLDGTEV 161
>gi|119187025|ref|XP_001244119.1| hypothetical protein CIMG_03560 [Coccidioides immitis RS]
Length = 398
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 116/232 (50%), Gaps = 41/232 (17%)
Query: 21 REVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVE 78
++VE+ F ++G I DI L G+ F+E+ED DA D + DG +F G RL V+
Sbjct: 119 QDVEEHFNQHGSGKITDIKLMS-----GFGFIEYEDALDARDVVP--DGTDFKGSRLTVQ 171
Query: 79 LAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVC 137
A G R + +S S + RR+ YR+ ++GLP + SWQDLKD R++G DV
Sbjct: 172 FARGPRHKET----FSGPSDRSNAPRPRRTPYRMQISGLPET-SWQDLKDFARQSGLDVV 226
Query: 138 FSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPS 197
+S+ RD G G V++ + D+K AI KLD EF+ + ++ D R P
Sbjct: 227 YSETLRDHEGR-GFVEFETGADLKTAIEKLDGREFKGSRVTCTQDIQAPDDR------PV 279
Query: 198 RSPYYSRSRSRSPYYSRSRSPSRSWSYSPRS-------RSYSPRGKYSRRSP 242
R PY RSRSP R Y P R YSPRG Y RSP
Sbjct: 280 RDPY------------RSRSPVRRGGYPPMDDYDRRPPRGYSPRGHYRERSP 319
>gi|193716028|ref|XP_001949124.1| PREDICTED: serine-arginine protein 55-like isoform 1 [Acyrthosiphon
pisum]
Length = 309
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 95/181 (52%), Gaps = 23/181 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VG L R R++E F K G + DI +K GYAF+EF+DYRDA+DA+ +G
Sbjct: 7 VFVGGLSHRVRERDLERFFQKIGRVKDIAMK-----NGYAFVEFDDYRDADDAVYELNGR 61
Query: 69 NFDGYRLRVELAHGGRRHSS-----------------SMDRYSSYSSGGSRGVSRRSDYR 111
+G R+ VE A G R S R + G R++YR
Sbjct: 62 ELNGERVSVERARGTPRGSDVWRGSGRGGDLPPPPPRRPRRDARDDRNDRYGPPTRTNYR 121
Query: 112 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSE 171
++V L S SWQDLKD MR+AG+V ++ + R G+V++ SY D+K A+ KLD +E
Sbjct: 122 LIVENLSSRVSWQDLKDFMRQAGEVTYADAHKQRKN-EGVVEFASYSDLKTALDKLDDTE 180
Query: 172 F 172
Sbjct: 181 L 181
>gi|395829006|ref|XP_003787652.1| PREDICTED: serine/arginine-rich splicing factor 6 [Otolemur
garnettii]
Length = 345
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 100/174 (57%), Gaps = 16/174 (9%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L + R ++++ F YG ++++DLK GY F+EFED RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRH---------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLP 118
G R+ VE A G RR S S +SG + G R++YR++V L
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS 118
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ +LD +E
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDRLDGTEI 171
>gi|198415633|ref|XP_002121331.1| PREDICTED: similar to splicing factor, arginine/serine-rich 4
[Ciona intestinalis]
Length = 292
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 96/191 (50%), Gaps = 33/191 (17%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R +VE F +G I DI+LK GY F+EF+D RDA+DA+ +
Sbjct: 6 VFIGRLSHRARENDVERFFKGFGKIRDINLK-----NGYGFVEFDDSRDADDAVYEMNNR 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMD---------------------------RYSSYSSGGS 101
+ G R+ VELA G R S D Y + G
Sbjct: 61 DLCGERVTVELARGVPRSSGGRDYRPDFRNDYRNDYRRRDDRGGGGGGRVNYFDSRAIGK 120
Query: 102 RGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMK 161
G R++YRV+V L + SWQDLKD++R AG+V ++ + R G+VD+ +YDDMK
Sbjct: 121 YGPPTRTNYRVIVENLSTRVSWQDLKDYLREAGEVTYADAHKHRRN-EGVVDFATYDDMK 179
Query: 162 YAIRKLDRSEF 172
AI KLD +E
Sbjct: 180 RAIDKLDNTEI 190
>gi|95007448|emb|CAJ20669.1| splicing factor, putative [Toxoplasma gondii RH]
Length = 216
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/157 (43%), Positives = 89/157 (56%), Gaps = 16/157 (10%)
Query: 35 DIDLKIPPRPPG------YAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVEL-AHGGRRHS 87
DID+K R G YAF+EFE R AEDA+ R GY + G LRVE A RR
Sbjct: 59 DIDIK---RARGGMSDSCYAFVEFETIRAAEDAVACRHGYLYRGRSLRVEFTAQPARRLG 115
Query: 88 SSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 147
S+ + GG+ G RR+ +R LV+ LP WQ LKDHMRRAG V F++V
Sbjct: 116 SNPN---FIPMGGASGPPRRTGFRALVSFLPPGCRWQHLKDHMRRAGPVGFAEVLSHG-- 170
Query: 148 MTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVR 184
G+V++ +D+KYA+R LD+SE R S ++VR
Sbjct: 171 -RGVVEFEHAEDLKYAVRSLDKSEMRVEGRGSVIKVR 206
>gi|403166701|ref|XP_003326577.2| hypothetical protein PGTG_07555 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375166678|gb|EFP82158.2| hypothetical protein PGTG_07555 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 258
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 93/169 (55%), Gaps = 16/169 (9%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
+ R +YVG +P D +VE F +YG ++D+ + G+ FLE++ RDAEDA+
Sbjct: 4 AGRRIYVGRIPPDASRTDVEKYFGRYGTLMDVRIM-----AGFGFLEYDSVRDAEDAVHD 58
Query: 65 RDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQ 124
+G +F G RL VE A R SGG RR +R+LV GL SWQ
Sbjct: 59 LNGRDFMGERLIVEFAKAPRGRD--------IHSGGHG--PRRGGFRLLVKGLSHETSWQ 108
Query: 125 DLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
DLKD R+AG+V + V R+ G G++++ S DD AIRKLD +E +
Sbjct: 109 DLKDFARQAGNVTRADVDRNMPG-EGLIEFASQDDADNAIRKLDGTELK 156
>gi|15080592|gb|AAH12039.1| Splicing factor, arginine/serine-rich 6 [Mus musculus]
Length = 339
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 99/174 (56%), Gaps = 16/174 (9%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L + R ++++ F YG +++IDLK GY F+EFED RDA+DA+ +
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNSK 58
Query: 69 NFDGYRLRVELAHGGRRH---------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLP 118
G R+ VE A G RR S S +SG + G R++YR++V L
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS 118
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ KLD +E
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 171
>gi|170045194|ref|XP_001850202.1| 52K active chromatin boundary protein [Culex quinquefasciatus]
gi|167868189|gb|EDS31572.1| 52K active chromatin boundary protein [Culex quinquefasciatus]
Length = 370
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 94/180 (52%), Gaps = 22/180 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP R R++E F YG DI +K GY F+EFEDYRDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHG------GRRHSSSMDRYSSYS---------SGGSR-GVSRRSDYRV 112
G R+ VE A G GRR SR G R++YR+
Sbjct: 61 ELLGERVVVEPARGTARGPGGRREYDRGGDRYGDRGRGGGGRYDKNSSRYGPPLRTEYRL 120
Query: 113 LVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
+V L S SWQDLKD+MR+AG+V ++ + R G+V++ + DMK AI KLD +E
Sbjct: 121 IVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRKN-EGVVEFATSSDMKTAIEKLDDTEL 179
>gi|221130960|ref|XP_002164119.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 1
[Hydra magnipapillata]
Length = 264
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 107/182 (58%), Gaps = 18/182 (9%)
Query: 1 MSSRSS---RTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDY 55
MSSR + ++VG L + R+R++E+ F G + D+++K+ GYAF+EFED
Sbjct: 1 MSSRDNPNRNRIFVGRLNPEARVRDLENFFKDNGFSRLKDVNIKL-----GYAFVEFEDK 55
Query: 56 RDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM---DR--YSSYSSGGSRGVSRRSDY 110
RDA+DA+ D F G R+ VE A G R + DR YS G RG +++
Sbjct: 56 RDADDAVYELDRKEFFGSRITVEHATGTARGGDTRGERDRGGYSVRERG--RGRPYNTEW 113
Query: 111 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRS 170
R++VT L S W DLKD+ R AG+V F++ ++R G G+V++ SY +MK A++K D S
Sbjct: 114 RLIVTNLSSRVGWMDLKDYFRSAGEVTFTKANKERVG-EGVVEFRSYREMKRALKKFDGS 172
Query: 171 EF 172
EF
Sbjct: 173 EF 174
>gi|224967104|ref|NP_080775.3| arginine/serine-rich splicing factor 6 [Mus musculus]
gi|306922366|ref|NP_001014207.2| splicing factor, arginine/serine-rich 6 [Rattus norvegicus]
gi|74197209|dbj|BAE35148.1| unnamed protein product [Mus musculus]
gi|74228832|dbj|BAE21902.1| unnamed protein product [Mus musculus]
gi|148674361|gb|EDL06308.1| splicing factor, arginine/serine-rich 6 [Mus musculus]
gi|149043026|gb|EDL96600.1| similar to dJ862K6.2.2 (splicing factor, arginine/serine-rich 6
(SRP55-2)(isoform 2)), isoform CRA_a [Rattus norvegicus]
Length = 339
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 99/174 (56%), Gaps = 16/174 (9%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L + R ++++ F YG +++IDLK GY F+EFED RDA+DA+ +
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNSK 58
Query: 69 NFDGYRLRVELAHGGRRH---------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLP 118
G R+ VE A G RR S S +SG + G R++YR++V L
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS 118
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ KLD +E
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 171
>gi|12836310|dbj|BAB23599.1| unnamed protein product [Mus musculus]
Length = 339
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 99/174 (56%), Gaps = 16/174 (9%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L + R ++++ F YG +++IDLK GY F+EFED RDA+DA+ +
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNSK 58
Query: 69 NFDGYRLRVELAHGGRRH---------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLP 118
G R+ VE A G RR S S +SG + G R++YR++V L
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS 118
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ KLD +E
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 171
>gi|417399301|gb|JAA46673.1| Putative serine/arginine-rich splicing factor 6 [Desmodus rotundus]
Length = 345
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 100/174 (57%), Gaps = 16/174 (9%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R ++++ F YG +++IDLK GY F+EFED RDA+DA+ +G
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRH---------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLP 118
+ G R+ VE A G RR S S +SG + G R+++R++V L
Sbjct: 59 DLCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEFRLIVENLS 118
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ KLD +E
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 171
>gi|395505264|ref|XP_003756963.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 1
[Sarcophilus harrisii]
Length = 340
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 99/174 (56%), Gaps = 16/174 (9%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R ++++ F YG ++++DLK GY F+EFED RDA+DA+ +G
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRH---------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLP 118
+ G R+ VE A G RR S ++G + G R++YR++V L
Sbjct: 59 DLCGERVIVEHARGPRRDRDGYSYGSRGGGGGYSSRRATGRDKYGPPVRTEYRLIVENLS 118
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ KLD +E
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 171
>gi|1049088|gb|AAA93073.1| SRp55-1 [Homo sapiens]
Length = 344
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 99/174 (56%), Gaps = 16/174 (9%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L + R ++++ F YG ++++DLK GY F+EFED RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRH---------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLP 118
G + VE A G RR S S +SG + G R++YR++V L
Sbjct: 59 ELCGEHVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS 118
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ KLD +E
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 171
>gi|78369222|ref|NP_001030349.1| serine/arginine-rich splicing factor 6 [Bos taurus]
gi|122145041|sp|Q3B7L6.1|SRSF6_BOVIN RecName: Full=Serine/arginine-rich splicing factor 6; AltName:
Full=Splicing factor, arginine/serine-rich 6
gi|77567850|gb|AAI07554.1| Splicing factor, arginine/serine-rich 6 [Bos taurus]
Length = 345
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 99/174 (56%), Gaps = 16/174 (9%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L + R ++++ F YG ++ IDLK GY F+EFED RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLGIDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRH---------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLP 118
G R+ VE A G RR S S +SG + G R+++R++V L
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEFRLIVENLS 118
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ KLD +E
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 171
>gi|1049086|gb|AAA93072.1| SRp55-3, partial [Homo sapiens]
Length = 335
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 99/174 (56%), Gaps = 16/174 (9%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L + R ++++ F YG ++++DLK GY F+EFED RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRR---------HSSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLP 118
G + VE A G RR S S +SG + G R++YR++V L
Sbjct: 59 ELCGEHVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS 118
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ KLD +E
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 171
>gi|126291113|ref|XP_001371339.1| PREDICTED: serine/arginine-rich splicing factor 6-like [Monodelphis
domestica]
Length = 340
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 99/174 (56%), Gaps = 16/174 (9%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R ++++ F YG ++++DLK GY F+EFED RDA+DA+ +G
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRH---------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLP 118
+ G R+ VE A G RR S ++G + G R++YR++V L
Sbjct: 59 DLCGERVIVEHARGPRRDRDGYSYGSRGGGGGYSSRRATGRDKYGPPVRTEYRLIVENLS 118
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ KLD +E
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 171
>gi|449486099|ref|XP_002195735.2| PREDICTED: serine/arginine-rich splicing factor 6 [Taeniopygia
guttata]
Length = 348
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 98/175 (56%), Gaps = 17/175 (9%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R ++++ F YG ++++DLK GY F+EFED RDA+DA+ +G
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRH----------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGL 117
+ G R+ VE A G RR S SG + G R+++R++V L
Sbjct: 59 DLCGERVIVEHARGPRRDRDGYSYSSRSGGGGGYSSRRQSGRDKYGPPVRTEFRLIVENL 118
Query: 118 PSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ KLD +E
Sbjct: 119 SSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 172
>gi|68066368|ref|XP_675167.1| pre-mRNA splicing factor [Plasmodium berghei strain ANKA]
gi|56494193|emb|CAH97347.1| pre-mRNA splicing factor, putative [Plasmodium berghei]
Length = 457
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 96/176 (54%), Gaps = 13/176 (7%)
Query: 30 YGPIVDIDLKIP--PRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 87
+G I ID+K+ YAF+ + D +DAE AI RDGY FDG RLRVE + +
Sbjct: 1 FGRIKYIDIKLTRGSTSTAYAFVHYYDIKDAEYAIERRDGYKFDGERLRVEFSGENK--- 57
Query: 88 SSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 147
S +Y G G R+++R++V+ LP + WQ LKD MR+ GDV ++ + +
Sbjct: 58 -SFGKYRRKEDGI--GPPLRTEHRIIVSNLPDNCKWQHLKDIMRQCGDVGYANIEHGK-- 112
Query: 148 MTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYS 203
GIV++ D M YAI K DR+EF+ + ++VR SY + RS YYS
Sbjct: 113 --GIVEFVDRDGMLYAIEKFDRAEFKVHDQVTNIKVRRDKRSLSYIK-KHRSDYYS 165
>gi|322792693|gb|EFZ16561.1| hypothetical protein SINV_05882 [Solenopsis invicta]
Length = 386
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 96/169 (56%), Gaps = 16/169 (9%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP TR R++E F YG D+ +K GY F+EF+DYRDA+DA+ Y
Sbjct: 59 VYVGGLPYGTRERDLERFFRGYGRFRDVLIK-----NGYGFVEFDDYRDADDAV-----Y 108
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSR-----RSDYRVLVTGLPSSASW 123
+G L E R S++R + +S + + R R++YR+ V L S SW
Sbjct: 109 ELNGKELLGESRDDMRHDRDSVNRNTRTASSYKQSLPRYGPPTRTEYRLTVENLSSRVSW 168
Query: 124 QDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
QDLKD+MR+AG+V ++ + R G+V++ +Y D+K AI KLD +E
Sbjct: 169 QDLKDYMRQAGEVTYADAHKQRRN-EGVVEFATYSDLKNAIDKLDDTEL 216
>gi|307189409|gb|EFN73819.1| Serine-arginine protein 55 [Camponotus floridanus]
Length = 387
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 101/196 (51%), Gaps = 38/196 (19%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP TR R++E F YG D+ +K GY F+EF+DYRDA+DA+ +G
Sbjct: 59 VYVGGLPYGTRERDLERFFRGYGRFRDVLIK-----NGYGFVEFDDYRDADDAVYELNGK 113
Query: 69 NFDGYRLRVELAHGGRRHSS---------------------------SMDRYSSYSSGGS 101
G R+ VE A G R S S++R + +S
Sbjct: 114 ELLGERITVERARGTPRGSDQWRYGDSRGGYGDSRRSARDDMRHDRDSVNRNTRTASSYK 173
Query: 102 RGVSR-----RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTS 156
+ + R R++YR+ V L S SWQDLKD+MR+AG+V ++ + R G+V++ +
Sbjct: 174 QSLPRYGPPTRTEYRLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRN-EGVVEFAT 232
Query: 157 YDDMKYAIRKLDRSEF 172
Y D+K AI KLD +E
Sbjct: 233 YSDLKNAIDKLDDTEL 248
>gi|326471023|gb|EGD95032.1| pre-RNA splicing factor Srp2 [Trichophyton tonsurans CBS 112818]
Length = 317
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 88/260 (33%), Positives = 127/260 (48%), Gaps = 41/260 (15%)
Query: 1 MSSRSSRTLYVGNLPGD---------------TRMREVEDLF--YKYGPIVDIDLKIPPR 43
MS SS LY+GNLP + +++E+ F + G I +I L
Sbjct: 1 MSEVSSTRLYLGNLPRNADSKGHLFCLDSLPPVNKQDIEEHFGSHGTGKITEIKLMQ--- 57
Query: 44 PPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRG 103
G+ F+E+ED DA+D + DG +F G RL V+ A G RR + +
Sbjct: 58 --GFGFIEYEDAMDAKDVVP--DGTDFKGERLTVQFARGPRRREP----FPGPPERSAAP 109
Query: 104 VSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKY 162
RR+ YR+ +TGLP + SWQDLKD R++G DV +S+ RDR G G V++ + +D++
Sbjct: 110 RPRRTIYRMQITGLPET-SWQDLKDFARQSGLDVVYSET-RDRDG-KGFVEFENGNDLRT 166
Query: 163 AIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSW 222
A+ KLD ++F+ + ++ R R PY SRS R P Y P +
Sbjct: 167 AVEKLDGTDFKGSRVTCTADIQPPMEDRV-----PRDPYRSRSPRRGPPYP----PVDEY 217
Query: 223 SYSPRSRSYSPRGKYSRRSP 242
R YSPRG Y RSP
Sbjct: 218 DRRGPPRGYSPRGHYRERSP 237
>gi|47220462|emb|CAG03242.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1292
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 97/176 (55%), Gaps = 18/176 (10%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R ++++ F YG +++IDLK GY F+EFED RDA+DA+ +G
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGKLMEIDLK-----NGYGFVEFEDNRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRR-----------HSSSMDRYSSYSSGGSR-GVSRRSDYRVLVTG 116
G R+ VE A G RR S S +G + G R++YR++V
Sbjct: 59 ELCGERVIVEHARGPRRDRDFYGGGYGGGGRSSSYNSRSRTGRDKYGPPVRTEYRLVVEN 118
Query: 117 LPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
L S SWQDLKD MR+AG+V ++ ++ G++++ SY DMK A+ KLD ++
Sbjct: 119 LSSRCSWQDLKDFMRQAGEVTYADAHKEHTN-EGVIEFRSYSDMKRALDKLDGTDI 173
>gi|156379214|ref|XP_001631353.1| predicted protein [Nematostella vectensis]
gi|156218392|gb|EDO39290.1| predicted protein [Nematostella vectensis]
Length = 200
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 92/171 (53%), Gaps = 13/171 (7%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G LP D R +VE YG I DI LK GY F+EF+D+RDAEDA+ +G
Sbjct: 4 IFLGRLPRDVRESDVEKFLRGYGKIRDISLK-----RGYGFVEFDDHRDAEDAVHDLNGR 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDR--YSSYSSGGSR-----GVSRRSDYRVLVTGLPSSA 121
+ G R+ VE + G R DR +S G R++Y V+V L S
Sbjct: 59 DLIGERVVVEFSKGRRSEGGGRDRRDFSGRGGRDGGRRPIYGPPVRTNYSVIVENLSSRT 118
Query: 122 SWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
SWQDLKD+ R+ G V ++ + R G G+V++ S DD+ AI KLD +E
Sbjct: 119 SWQDLKDYFRKYGKVTYADAHKKRIG-EGVVEFESKDDLNTAIEKLDDTEL 168
>gi|401397011|ref|XP_003879960.1| hypothetical protein NCLIV_004090 [Neospora caninum Liverpool]
gi|325114368|emb|CBZ49925.1| hypothetical protein NCLIV_004090 [Neospora caninum Liverpool]
Length = 378
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 89/152 (58%), Gaps = 7/152 (4%)
Query: 47 YAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVEL-AHGGRRHSSSMDRYSSYSS---GGSR 102
YAF+EFE R AEDA+ R GY + G LRVE A RR S ++ + + GGS
Sbjct: 6 YAFVEFETIRAAEDAVACRHGYLYRGRSLRVEFTAQPSRRAGSGVNPNTIPTGSFGGGSA 65
Query: 103 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 162
G RR+ +RVLV+ LP WQ LKDHMR+AG V F++V G+V+Y +D++Y
Sbjct: 66 GPPRRTGHRVLVSFLPPGCRWQHLKDHMRKAGPVGFAEVLSQ---GRGVVEYEHPEDLQY 122
Query: 163 AIRKLDRSEFRNAFSRSYVRVREYDSRRSYSR 194
A+R LD++E R S ++V + S R Y R
Sbjct: 123 AVRSLDKTELRVDGRGSIIKVEKDYSARDYDR 154
>gi|390352204|ref|XP_003727843.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 1
[Strongylocentrotus purpuratus]
Length = 302
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 94/186 (50%), Gaps = 24/186 (12%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
SS +YVG L R R+VE F +G I +I+LK G+ F+EFEDYRDA+DA+
Sbjct: 2 SSGRVYVGRLSYQARERDVERFFRGFGRIREINLK-----NGFGFVEFEDYRDADDAVYE 56
Query: 65 RDGYNFDGYRLRVELAHGGRR------------------HSSSMDRYSSYSSGGSRGVSR 106
+G G R+ +E A G R S G
Sbjct: 57 LNGKELVGERVIIEHARGPARGRDEYRFGGEGGGGGGGRGRDGGGGGGGSRSSQRYGPPV 116
Query: 107 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 166
R+++R++V L S SWQDLKD+MR+AG+V F+ + GIV++ +Y DMK A+ K
Sbjct: 117 RTEFRIVVENLSSRVSWQDLKDYMRQAGEVTFADAHKQHKN-EGIVEFATYSDMKNAVEK 175
Query: 167 LDRSEF 172
LD +E
Sbjct: 176 LDGTEI 181
>gi|157110209|ref|XP_001651001.1| arginine/serine-rich splicing factor [Aedes aegypti]
gi|108883952|gb|EAT48177.1| AAEL000769-PA [Aedes aegypti]
Length = 247
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 94/172 (54%), Gaps = 15/172 (8%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y G LP DTR R++E F +G I +I L+ GYAF+EF+DYRDAEDAI +G
Sbjct: 5 VYAGKLPHDTRERDLERFFEGFGRIREILLR-----RGYAFVEFDDYRDAEDAIYELNGA 59
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
G R+ VE R S +R +R+ +R++V L S W++LK
Sbjct: 60 KLLGQRIVVEATKRPPRFGGSSNRPKP---------PQRTYHRLIVENLSSRIDWRELKA 110
Query: 129 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSY 180
+MR+AG+V F+ RDR G+V++ S DMK A++ D +E + R Y
Sbjct: 111 YMRKAGNVTFADAHRDRMN-EGVVEFASRHDMKQALKMFDDTELNGRYIRLY 161
>gi|443710288|gb|ELU04543.1| hypothetical protein CAPTEDRAFT_220292 [Capitella teleta]
Length = 291
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 100/183 (54%), Gaps = 25/183 (13%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG + DI LK GY F+EFEDYRDA+DA+ +G
Sbjct: 5 VYIGRLSYQVRERDVERFFKGYGRVTDILLK-----NGYGFVEFEDYRDADDAVYELNGK 59
Query: 69 NFDGYRLRVELAHGG-------------RRHSSSMDRYSSY-----SSGGSR-GVSRRSD 109
+ G R+ VE A G DRY+SY S+ SR G R+
Sbjct: 60 DLMGDRVLVEHAKGTPRGEGRSSSGGRGSDRGGGGDRYNSYAPPRRSARDSRYGPPVRTQ 119
Query: 110 YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDR 169
YR++V L S SWQDLKD+MR+AG+V ++ + + GIV++ + DM AIRKL++
Sbjct: 120 YRLVVENLSSRVSWQDLKDYMRQAGEVTYADAHKSKRN-EGIVEFATRSDMDNAIRKLNK 178
Query: 170 SEF 172
+E
Sbjct: 179 TEI 181
>gi|336465804|gb|EGO53969.1| hypothetical protein NEUTE1DRAFT_118022 [Neurospora tetrasperma
FGSC 2508]
gi|350287365|gb|EGZ68612.1| hypothetical protein NEUTE2DRAFT_146011 [Neurospora tetrasperma
FGSC 2509]
Length = 315
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/248 (35%), Positives = 126/248 (50%), Gaps = 23/248 (9%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP +VE F +G I +I L G+ F+E++D DA
Sbjct: 1 MTEVSSTRLYLGNLPRHATKADVEAHFATHGTGEITEIKLMN-----GFGFIEYKDAMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLP 118
D + G +F G RL V+ A G R H ++ + R RR+ +R+ ++GLP
Sbjct: 56 RDVVPAFHGSDFMGERLTVQFARGAR-HREGGPGFTHERNSQPR--PRRTPHRMQISGLP 112
Query: 119 SSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFS 177
+ SWQDLKD R++G DV +S+ R++ G G V++ + D++ A+ KLD EF+
Sbjct: 113 NETSWQDLKDFARQSGLDVVYSETTRNQNG-EGFVEFENAADLRTAVEKLDNREFKGQRV 171
Query: 178 RSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPY---YSRSRSPSRSWSYSPRSRSYSPR 234
+ V + D R+ R+ SRSP R R P Y R P R YSPR Y R
Sbjct: 172 -TCVANTQPDIPRNDHRARSRSP---RGRPYPPPMDDYDRRGPPPR--GYSPRRDGY--R 223
Query: 235 GKYSRRSP 242
Y RSP
Sbjct: 224 DGYRDRSP 231
>gi|336266018|ref|XP_003347779.1| hypothetical protein SMAC_03877 [Sordaria macrospora k-hell]
gi|380091314|emb|CCC11171.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 315
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/248 (35%), Positives = 126/248 (50%), Gaps = 23/248 (9%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP +VE F +G I +I L G+ F+E++D DA
Sbjct: 1 MTEVSSTRLYLGNLPRHATKADVEAHFATHGTGEITEIKLMN-----GFGFIEYKDAMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLP 118
D + G +F G RL V+ A G R H ++ + R RR+ +R+ ++GLP
Sbjct: 56 RDVVPAFHGSDFMGERLTVQFARGAR-HREGGPGFTHERNSQPR--PRRTPHRMQISGLP 112
Query: 119 SSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFS 177
+ SWQDLKD R++G DV +S+ R++ G G V++ + D++ A+ KLD EF+
Sbjct: 113 NETSWQDLKDFARQSGLDVVYSETTRNQNG-EGFVEFENAADLRTAVEKLDNREFKGQRV 171
Query: 178 RSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPY---YSRSRSPSRSWSYSPRSRSYSPR 234
+ V + D R+ R+ SRSP R R P Y R P R YSPR Y R
Sbjct: 172 -TCVANTQPDIPRNDHRARSRSP---RGRPYPPPVDDYDRRGPPPR--GYSPRRDGY--R 223
Query: 235 GKYSRRSP 242
Y RSP
Sbjct: 224 DGYRDRSP 231
>gi|156358473|ref|XP_001624543.1| predicted protein [Nematostella vectensis]
gi|156211330|gb|EDO32443.1| predicted protein [Nematostella vectensis]
Length = 189
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 102/181 (56%), Gaps = 25/181 (13%)
Query: 3 SRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAI 62
SRS+R +Y G LP D R R++E YG + +I +K+ GY F+EF+DYRDA+D +
Sbjct: 2 SRSTR-VYFGRLPRDCRERDLEKFVRGYGRVREISMKL-----GYGFVEFDDYRDADDCV 55
Query: 63 RGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYS-----------SGGSRGVSRRSDYR 111
+G N G R+ VE HS + R S Y S R R+++R
Sbjct: 56 YDLNGRNLLGERVVVE-------HSRNPSRGSDYGYRRDSSSRSRSSRRGRTPPIRTEHR 108
Query: 112 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSE 171
+ V L S ++WQDLK++M + G+V F+ + R G G+V++ + DDMK A++KLD +E
Sbjct: 109 LAVENLSSRSNWQDLKEYMGKVGEVTFADAHKRRQG-EGVVEFATKDDMKTALKKLDDTE 167
Query: 172 F 172
F
Sbjct: 168 F 168
>gi|341881506|gb|EGT37441.1| hypothetical protein CAEBREN_07353 [Caenorhabditis brenneri]
Length = 401
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 99/185 (53%), Gaps = 11/185 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D +V F +G + +D K + AF+ + D R+A+DA+ +
Sbjct: 8 VYVGNLPLDVTKEQVGQFFSNWGEVTYVDFK-QTKTGRCAFVGYYDRREAQDAVMMMNSA 66
Query: 69 NFDGYRLRVELAHG----GRRHS--SSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSAS 122
F G RLRVE +G GR SSM+ + +G+ RR+D+RV V G+P + S
Sbjct: 67 VFHGRRLRVEFPNGLGPRGRNGQPMSSMNSNARIRRPPGQGIQRRTDFRVQVRGIPETGS 126
Query: 123 WQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVR 182
WQD+KDH+R AG+V F+ + RG GIV++ ++ I +F + + + V+
Sbjct: 127 WQDIKDHVRAAGEVVFADI---RGHGIGIVEFEEEGSVRKCIEMFHNQDFTSHYHET-VK 182
Query: 183 VREYD 187
++ D
Sbjct: 183 LQMID 187
>gi|432882989|ref|XP_004074178.1| PREDICTED: uncharacterized protein LOC101163182 isoform 2 [Oryzias
latipes]
Length = 384
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 101/180 (56%), Gaps = 22/180 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R ++VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYRAREKDVERFFKGYGKILEVDLK-----NGYGFVEFDDPRDADDAVYDLNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSS------SMDRYSSYSSG-------GSR---GVSRRSDYRV 112
G R+ VE G RR ++D+ SS SS G R G R+DYR+
Sbjct: 59 ELCGERVIVEHTKGPRRDGGYGGGGRNLDQESSRSSKNGGYGRWGGRDRYGPPVRTDYRL 118
Query: 113 LVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
+V L S SWQDLKD+MR+AG+V ++ + R G++++ Y DMK A+ KLD +E
Sbjct: 119 IVENLSSRCSWQDLKDYMRQAGEVTYADTHKGRRN-EGVIEFRQYSDMKRALEKLDGTEV 177
>gi|345491212|ref|XP_001603815.2| PREDICTED: serine-arginine protein 55-like isoform 2 [Nasonia
vitripennis]
Length = 364
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 106/204 (51%), Gaps = 42/204 (20%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS+R ++VG L R R++E F KYG I ++ +K G+AF+EF+DYRDA+D
Sbjct: 1 MSTR----VFVGGLTYRVRERDLEKFFRKYGRIKEVAMK-----NGFAFVEFDDYRDADD 51
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHS---------------------------SSMDRY 93
A+ +G G R+ VE A G R S S++R
Sbjct: 52 AVYELNGKELLGERITVERARGTPRGSDQWRYGDSRGGYGDSRRSARDDMRHDRDSVNRN 111
Query: 94 SSYSSGGSRGVSR-----RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM 148
+ +S + + R R++YR+ V L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 112 TRTTSSYKQSLPRYGPPTRTEYRLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRN- 170
Query: 149 TGIVDYTSYDDMKYAIRKLDRSEF 172
G+V++ +Y D+K AI KLD +E
Sbjct: 171 EGVVEFATYSDLKNAIEKLDDTEL 194
>gi|328786878|ref|XP_391860.4| PREDICTED: serine/arginine-rich splicing factor 4 [Apis mellifera]
Length = 419
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 101/196 (51%), Gaps = 38/196 (19%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP TR R++E F YG D+ +K GY F+EF+DYRDA+DA+ +G
Sbjct: 59 VYVGGLPYGTRERDLERFFRGYGRFRDVLIK-----NGYGFVEFDDYRDADDAVYELNGK 113
Query: 69 NFDGYRLRVELAHGGRRHSS---------------------------SMDRYSSYSSGGS 101
G R+ VE A G R S S++R + +S
Sbjct: 114 ELLGERITVERARGTPRGSDQWRYGDSRGGYGDSRRSARDDMRHDRDSVNRNTRTASSYK 173
Query: 102 RGVSR-----RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTS 156
+ + R R++YR+ V L S SWQDLKD+MR+AG+V ++ + R G+V++ +
Sbjct: 174 QSLPRYGPPTRTEYRLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRN-EGVVEFAT 232
Query: 157 YDDMKYAIRKLDRSEF 172
Y D+K AI KLD +E
Sbjct: 233 YSDLKNAIDKLDDTEL 248
>gi|225714068|gb|ACO12880.1| Splicing factor, arginine/serine-rich 4 [Lepeophtheirus salmonis]
gi|290462833|gb|ADD24464.1| Splicing factor, arginine/serine-rich 4 [Lepeophtheirus salmonis]
Length = 233
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 95/173 (54%), Gaps = 17/173 (9%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
LY+GN+ DTR R+VE F YG + ++ LK GY F+EFED+RDA+DA++ DG
Sbjct: 8 LYLGNISDDTRERDVEKFFKGYGKLREVALK-----NGYGFVEFEDHRDADDAVQDLDGK 62
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV---------SRRSDYRVLVTGLPS 119
+ +G R+RVE A R +S RY S S RR+ YR+ V L +
Sbjct: 63 DMNGSRVRVEFARSPREKRNS--RYQSRRSPPRGRRGPPMKRNPPGRRTQYRIRVENLST 120
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
SWQDLKD+ R G++ ++ + R G+V++ M+ A+ +LD ++
Sbjct: 121 RTSWQDLKDYFRSCGEITYTNAHKPRNN-EGVVEFGDKRAMENALDRLDDTDL 172
>gi|350408072|ref|XP_003488292.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 1
[Bombus impatiens]
Length = 394
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 101/196 (51%), Gaps = 38/196 (19%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP TR R++E F YG D+ +K GY F+EF+DYRDA+DA+ +G
Sbjct: 59 VYVGGLPYGTRERDLERFFRGYGRFRDVLIK-----NGYGFVEFDDYRDADDAVYELNGK 113
Query: 69 NFDGYRLRVELAHGGRRHSS---------------------------SMDRYSSYSSGGS 101
G R+ VE A G R S S++R + +S
Sbjct: 114 ELLGERITVERARGTPRGSDQWRYGDSRGGYGDSRRSARDDMRHDRDSVNRNTRTASSYK 173
Query: 102 RGVSR-----RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTS 156
+ + R R++YR+ V L S SWQDLKD+MR+AG+V ++ + R G+V++ +
Sbjct: 174 QSLPRYGPPTRTEYRLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRN-EGVVEFAT 232
Query: 157 YDDMKYAIRKLDRSEF 172
Y D+K AI KLD +E
Sbjct: 233 YSDLKNAIDKLDDTEL 248
>gi|156356000|ref|XP_001623720.1| predicted protein [Nematostella vectensis]
gi|156210446|gb|EDO31620.1| predicted protein [Nematostella vectensis]
Length = 188
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 103/193 (53%), Gaps = 11/193 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y G LP +++E+L +G + ++D K GYA++ F++ +DA+ A+ +
Sbjct: 5 VYCGRLPATATEKDLENLVKVFGKVREVDFK-----EGYAYVVFKENKDADRAVAALNNS 59
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGG-SRGVSRRSDYRVLVTGLPSSASWQDLK 127
F G ++ +E A R Y++ G RS++RV+V L + A W +LK
Sbjct: 60 EFHGAKILMEKAKEMRNGVGGYTAAGGYTARTRQMGPPVRSEFRVIVENLSTRAKWLELK 119
Query: 128 DHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYD 187
+ M AG+VC++ R R G G+V++T+ +DMK AI LD+ EF +R+R+
Sbjct: 120 EFMNNAGEVCYADTHRRRPG-EGVVEFTTEEDMKRAIASLDKCEFYG----KRIRLRQEL 174
Query: 188 SRRSYSRSPSRSP 200
R S+S SRSP
Sbjct: 175 PRSGTSKSRSRSP 187
>gi|346326093|gb|EGX95689.1| Nucleotide-binding, alpha-beta plait [Cordyceps militaris CM01]
Length = 332
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 100/182 (54%), Gaps = 23/182 (12%)
Query: 1 MSSRSSRT-LYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRD 57
MS+ S T LY+GNLP + ++E F +G I ++ L G+ F+E++D D
Sbjct: 1 MSNEVSNTRLYLGNLPPNATKADIEAHFATHGTGEITEVKLMH-----GFGFIEYKDPMD 55
Query: 58 AEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV-----SRRSDYRV 112
A D + DG +F G RL V+ A G R Y +GG+ RR+ +R+
Sbjct: 56 ARDVVP--DGSDFKGTRLTVQFARGPRPREPP-----GYGAGGAHHERAAPRPRRTIHRM 108
Query: 113 LVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSE 171
+TGLP+ SWQDLKD R+AG DV +S+ RD G G V+Y + +D++ A+ KLD E
Sbjct: 109 TITGLPNETSWQDLKDFARQAGPDVVYSETARDSG--RGFVEYENANDLRTAVEKLDGFE 166
Query: 172 FR 173
F+
Sbjct: 167 FK 168
>gi|71895047|ref|NP_001026014.1| splicing factor, arginine/serine-rich 6 [Gallus gallus]
gi|53133810|emb|CAG32234.1| hypothetical protein RCJMB04_20j14 [Gallus gallus]
Length = 348
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 98/175 (56%), Gaps = 17/175 (9%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R ++++ F YG ++++DLK GY F++FED RDA+DA+ +G
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGRLLEVDLK-----NGYGFVKFEDSRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRH----------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGL 117
+ G R+ VE A G RR S SG + G R+++R++V L
Sbjct: 59 DLCGERVIVEHARGPRRDRDGYSYSSRSGGGGGYSSRRQSGRDKYGPPVRTEHRLIVENL 118
Query: 118 PSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ KLD +E
Sbjct: 119 SSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 172
>gi|156030683|ref|XP_001584668.1| hypothetical protein SS1G_14437 [Sclerotinia sclerotiorum 1980]
gi|154700828|gb|EDO00567.1| hypothetical protein SS1G_14437 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 307
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 97/178 (54%), Gaps = 14/178 (7%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP + +VE F +G I +I L G+ F+E++D DA
Sbjct: 1 MTEVSSTRLYLGNLPRNATKADVEAHFNTHGTGEITEIKLMN-----GFGFIEYKDAMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLP 118
D + G +F G RL V+ A G R + D +++ R RR+ +R+ ++GLP
Sbjct: 56 RDVVPAFHGSDFMGERLTVQFARGTR----NRDTFANPERTAPR--PRRTPHRMQISGLP 109
Query: 119 SSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNA 175
SWQDLKD R++ DV +S+ RDR G V++ + D+K A+ KLD EF+ A
Sbjct: 110 GETSWQDLKDFARQSSLDVVYSETGRDRDGKGSFVEFETAADLKTAVEKLDGREFKGA 167
>gi|302894677|ref|XP_003046219.1| hypothetical protein NECHADRAFT_33691 [Nectria haematococca mpVI
77-13-4]
gi|256727146|gb|EEU40506.1| hypothetical protein NECHADRAFT_33691 [Nectria haematococca mpVI
77-13-4]
Length = 329
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 103/186 (55%), Gaps = 20/186 (10%)
Query: 1 MSSRSSRT-LYVGNLPGDTRMREVEDLFYKYGP--IVDIDLKIPPRPPGYAFLEFEDYRD 57
M++ S T LY+GNLP + +VE F +G I ++ L G+ F+E++D D
Sbjct: 1 MTTEVSSTRLYLGNLPRNATKSDVEAHFATHGTGEITEVKLM-----NGFGFIEYKDPMD 55
Query: 58 AEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGL 117
A+D + DG NF G RL V+ AHG R + ++ R RR+ +R+ +TGL
Sbjct: 56 AQDVVP--DGSNFMGERLTVQFAHGPRHREGG---FGNHERAAPR--PRRTPHRMQITGL 108
Query: 118 PSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF---R 173
P+ SWQDLKD R++ DV +S+ RD G G V++ + D++ A+ KLD EF R
Sbjct: 109 PNDTSWQDLKDFARQSSLDVVYSETGRDSNGR-GFVEFETAADLRTAVEKLDGREFKGQR 167
Query: 174 NAFSRS 179
N +RS
Sbjct: 168 NMLTRS 173
>gi|209876590|ref|XP_002139737.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209555343|gb|EEA05388.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 377
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 116/232 (50%), Gaps = 24/232 (10%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
+ R ++VGNLP +++ D F K G I ++LK + F+E+E+ AE A R
Sbjct: 7 NPRKVFVGNLPAGYAEQDLRDFFSKVGTISKLELKQ-----RFCFIEYEEESQAEAAHRE 61
Query: 65 RDGYNFDGYRLRVE----LAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
DG F G R+ V+ L +++ +Y+ RG R+ YRV V L +
Sbjct: 62 LDGVEFGGQRIAVQPHDPLVRTKDVENTNKPQYNRPLPSDGRGPPRKH-YRVCVFNLDEN 120
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSY 180
ASW+DLKD+ R+ G+V +S VF +G G+V+Y + ++MK A+ ++ F R+
Sbjct: 121 ASWRDLKDYGRQIGEVNYSAVFHYQGQKVGVVEYLTVEEMKRALEEIPNLPFLGKTIRAE 180
Query: 181 VRVREYDSRRSYS-------RSP---SRSPYYSRSRSRSP----YYSRSRSP 218
V + D + + RSP S PY R RSR P Y RSRSP
Sbjct: 181 EDVGQLDRELAAANGYGIKRRSPPSYSSGPYGGRPRSRYPSPPRYRQRSRSP 232
>gi|85096852|ref|XP_960334.1| hypothetical protein NCU07069 [Neurospora crassa OR74A]
gi|28921822|gb|EAA31098.1| predicted protein [Neurospora crassa OR74A]
Length = 313
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 127/248 (51%), Gaps = 25/248 (10%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP +VE F +G I +I L G+ F+E++D DA
Sbjct: 1 MTEVSSTRLYLGNLPRHATKADVEAHFATHGTGEITEIKLMN-----GFGFIEYKDAMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLP 118
D + DG +F G RL V+ A G R H ++ + R RR+ +R+ ++GLP
Sbjct: 56 RDVVP--DGSDFMGERLTVQFARGAR-HREGGPGFTHERNSQPR--PRRTPHRMQISGLP 110
Query: 119 SSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFS 177
+ SWQDLKD R++G DV +S+ R++ G G V++ + D++ A+ KLD EF+
Sbjct: 111 NETSWQDLKDFARQSGLDVVYSETTRNQNG-EGFVEFENAADLRTAVEKLDNREFKGQRV 169
Query: 178 RSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPY---YSRSRSPSRSWSYSPRSRSYSPR 234
+ V + D R+ R+ SRSP R R P Y R P R YSPR Y R
Sbjct: 170 -TCVANTQPDIPRNDHRARSRSP---RGRPYPPPIDDYDRRGPPPR--GYSPRRDGY--R 221
Query: 235 GKYSRRSP 242
Y RSP
Sbjct: 222 DGYRDRSP 229
>gi|350408075|ref|XP_003488293.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 2
[Bombus impatiens]
Length = 418
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 101/196 (51%), Gaps = 38/196 (19%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP TR R++E F YG D+ +K GY F+EF+DYRDA+DA+ +G
Sbjct: 59 VYVGGLPYGTRERDLERFFRGYGRFRDVLIK-----NGYGFVEFDDYRDADDAVYELNGK 113
Query: 69 NFDGYRLRVELAHGGRRHSS---------------------------SMDRYSSYSSGGS 101
G R+ VE A G R S S++R + +S
Sbjct: 114 ELLGERITVERARGTPRGSDQWRYGDSRGGYGDSRRSARDDMRHDRDSVNRNTRTASSYK 173
Query: 102 RGVSR-----RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTS 156
+ + R R++YR+ V L S SWQDLKD+MR+AG+V ++ + R G+V++ +
Sbjct: 174 QSLPRYGPPTRTEYRLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRN-EGVVEFAT 232
Query: 157 YDDMKYAIRKLDRSEF 172
Y D+K AI KLD +E
Sbjct: 233 YSDLKNAIDKLDDTEL 248
>gi|390352206|ref|XP_798746.2| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 2
[Strongylocentrotus purpuratus]
Length = 349
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 98/195 (50%), Gaps = 33/195 (16%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
SS +YVG L R R+VE F +G I +I+LK G+ F+EFEDYRDA+DA+
Sbjct: 40 SSGRVYVGRLSYQARERDVERFFRGFGRIREINLK-----NGFGFVEFEDYRDADDAVYE 94
Query: 65 RDGYNFDGYRLRVELAHGGRRHSSSM--------DRYSSYSSGGSR-------------- 102
+G G R+ +E A G R D++ GG
Sbjct: 95 LNGKELVGERVIIEHARGPARGRDEYRYGYRRRGDKFGGEGGGGGGGRGRDGGGGGGGSR 154
Query: 103 -----GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSY 157
G R+++R++V L S SWQDLKD+MR+AG+V F+ + GIV++ +Y
Sbjct: 155 SSQRYGPPVRTEFRIVVENLSSRVSWQDLKDYMRQAGEVTFADAHKQHKN-EGIVEFATY 213
Query: 158 DDMKYAIRKLDRSEF 172
DMK A+ KLD +E
Sbjct: 214 SDMKNAVEKLDGTEI 228
>gi|148238297|ref|NP_001085381.1| serine/arginine-rich splicing factor 4 [Xenopus laevis]
gi|49257226|gb|AAH71160.1| MGC83263 protein [Xenopus laevis]
Length = 259
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 97/176 (55%), Gaps = 18/176 (10%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R R+VE F YG I +I+LK G+ F+EF+D+RDA+DA+ +G
Sbjct: 6 VFIGRLSPHARERDVEKFFKGYGRIREINLK-----NGFGFVEFDDHRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSM--------DRYS---SYSSGGSR-GVSRRSDYRVLVTG 116
R+ +ELA R M +R++ S S G SR G R+++R++V
Sbjct: 61 VLCNERVTIELARNRRGRGGMMGGGGGRYPNRFAYRQSNSGGPSRYGPPVRTEHRIIVEN 120
Query: 117 LPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
L S SWQDLKD MR+AG+V + R G+V++ SY DMK A+ KLD E
Sbjct: 121 LSSRVSWQDLKDFMRKAGEVTYVDAHRSNRN-EGVVEFASYSDMKSALDKLDGVEL 175
>gi|452989025|gb|EME88780.1| hypothetical protein MYCFIDRAFT_209897, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 209
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 106/205 (51%), Gaps = 17/205 (8%)
Query: 2 SSRSSRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDAE 59
+S S+ LY+GNLP + +VE+ F +G I +I L G+ F+E++D DA
Sbjct: 15 ASVSNTRLYLGNLPRNATKADVENHFNTHGTGEITEIKLM-----NGFGFIEYKDAMDAR 69
Query: 60 DAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPS 119
D + G F G RL V+ A G R + + RR+ +R+ +TGLP
Sbjct: 70 DVVPAFHGSEFMGERLVVQFARGSTRPREGFEHQPRMAP-----RPRRTIHRMTITGLPF 124
Query: 120 SASWQDLKDHMRRAG-DVCFSQVFRDR---GGMTGIVDYTSYDDMKYAIRKLDRSEFRNA 175
SWQDLKD R++G DV +S+V R+R G G V+Y + D+ A+ KLD SEF+ +
Sbjct: 125 ETSWQDLKDFARQSGLDVVYSEVNRERDPSGTGKGFVEYETAADLASAVEKLDNSEFKGS 184
Query: 176 FSRSYVRVREYDSRRSYSRSPSRSP 200
R + + D R R SRSP
Sbjct: 185 TVRC-ISDPQTDIPRPRERFRSRSP 208
>gi|47087341|ref|NP_998631.1| serine/arginine-rich splicing factor 6a [Danio rerio]
gi|32822789|gb|AAH55238.1| Splicing factor, arginine/serine-rich 6a [Danio rerio]
Length = 347
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 93/164 (56%), Gaps = 24/164 (14%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R ++++ F YG ++++DLK GY F+EFED RDA+DA+ +G
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGKLLEVDLK-----NGYGFVEFEDTRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
GY R + GR D+Y G R++YR++V L S SWQDLKD
Sbjct: 59 ELCGYSSR---SRTGR------DKY---------GPPVRTEYRLIVENLSSRCSWQDLKD 100
Query: 129 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
MR+AG+V ++ ++R G++++ SY DM+ A+ KLD ++
Sbjct: 101 FMRQAGEVTYADAHKERAN-EGVIEFRSYSDMRRALEKLDGTDI 143
>gi|221485545|gb|EEE23826.1| splicing factor, putative [Toxoplasma gondii GT1]
Length = 351
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/186 (39%), Positives = 100/186 (53%), Gaps = 14/186 (7%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G+LPG+ ++VE F K+G I+ ++ K GY FLE+ D RDA DAI G
Sbjct: 17 IYIGSLPGEYTDKDVEREFEKFGKIIKLEFKRTVSGAGYCFLEYADPRDARDAIAQLHGR 76
Query: 69 NFDGYR----LRVELAHGGRRHSSSMDRYSSYSSGGSRGVS-RRSDYRVLVTGLPSSASW 123
G R LRVE+ SS D + + RG++ RR + + V GLP S SW
Sbjct: 77 PPPGMRGAAPLRVEIPLA---RSSRPDGFGEEAL--PRGLAGRRGRFVLEVRGLPPSGSW 131
Query: 124 QDLKDHMRRAGDVCFSQVFRDRGG---MTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRS 179
QDLKDH R GDV F++V +D + G V + S DM AI LD S FR + +S
Sbjct: 132 QDLKDHFRGIGDVGFAEVRKDPDAPDSVMGKVSFFSKRDMMEAIEVLDGSTFRSHEGEKS 191
Query: 180 YVRVRE 185
+ VRE
Sbjct: 192 RISVRE 197
>gi|237844047|ref|XP_002371321.1| splicing factor, putative [Toxoplasma gondii ME49]
gi|211968985|gb|EEB04181.1| splicing factor, putative [Toxoplasma gondii ME49]
gi|221506395|gb|EEE32030.1| splicing factor, putative [Toxoplasma gondii VEG]
Length = 351
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/186 (39%), Positives = 100/186 (53%), Gaps = 14/186 (7%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G+LPG+ ++VE F K+G I+ ++ K GY FLE+ D RDA DAI G
Sbjct: 17 IYIGSLPGEYTDKDVEREFEKFGKIIKLEFKRTVSGAGYCFLEYADPRDARDAIAQLHGR 76
Query: 69 NFDGYR----LRVELAHGGRRHSSSMDRYSSYSSGGSRGVS-RRSDYRVLVTGLPSSASW 123
G R LRVE+ SS D + + RG++ RR + + V GLP S SW
Sbjct: 77 PPPGMRGAAPLRVEIPLA---RSSRPDGFGEEAL--PRGLAGRRGRFVLEVRGLPPSGSW 131
Query: 124 QDLKDHMRRAGDVCFSQVFRDRGG---MTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRS 179
QDLKDH R GDV F++V +D + G V + S DM AI LD S FR + +S
Sbjct: 132 QDLKDHFRGIGDVGFAEVRKDPDAPDSVMGKVSFFSKRDMMEAIEVLDGSTFRSHEGEKS 191
Query: 180 YVRVRE 185
+ VRE
Sbjct: 192 RISVRE 197
>gi|410916817|ref|XP_003971883.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Takifugu
rubripes]
Length = 310
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 90/174 (51%), Gaps = 16/174 (9%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EF+D RDAEDA+ DG
Sbjct: 6 IFIGRLSPTAREKDVERFFKGYGRIRDIDLK-----KGFGFVEFDDPRDAEDAVYELDGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSM--------DRYS--SYSSGGSRGVSRRSDYRVLVTGLP 118
R+ +E A R DRY S SS R++ R++V L
Sbjct: 61 ELCNERVTIEHARVRLRGGRGRRPGGGRFSDRYGRGSQSSRSRNPPPVRTENRLIVENLS 120
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
S SWQDLKD MR+AG+V F+ R + G+V++ SY D+K A+ KL E
Sbjct: 121 SRVSWQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYSDLKNALEKLSGKEM 173
>gi|432864636|ref|XP_004070385.1| PREDICTED: uncharacterized protein LOC101162527 isoform 1 [Oryzias
latipes]
Length = 367
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 98/178 (55%), Gaps = 20/178 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R ++++ F YG ++++D+K GY F+EFED RDA+DA+ +G
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGKLLEVDMK-----NGYGFVEFEDNRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR--------------GVSRRSDYRVLV 114
G R+ VE A G RR SS+ G S G R++YR++V
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYGGGSSWGGGRSNNSSSSRTRVGRDKYGPPVRTEYRLIV 118
Query: 115 TGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
L S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ KLD ++
Sbjct: 119 ENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNQ-GVIEFRSYSDMKRALDKLDGTDI 175
>gi|383848642|ref|XP_003699957.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Megachile
rotundata]
Length = 418
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 101/196 (51%), Gaps = 38/196 (19%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP TR R++E F YG D+ +K GY F+EF+DYRDA+DA+ +G
Sbjct: 59 VYVGGLPYGTRERDLERFFRGYGRFRDVLIK-----NGYGFVEFDDYRDADDAVYELNGK 113
Query: 69 NFDGYRLRVELAHGGRRHS---------------------------SSMDRYSSYSSGGS 101
G R+ VE A G R S S++R + +S
Sbjct: 114 ELLGERITVERARGTPRGSDQWRYGDSRGGYGDSRRSARDDMRHDRDSVNRNTRTASSYK 173
Query: 102 RGVSR-----RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTS 156
+ + R R++YR++V L S SWQDLKD+MR AG+V ++ + R G+V++ +
Sbjct: 174 QSLPRYGPPTRTEYRLIVENLSSRVSWQDLKDYMRHAGEVTYADAHKQRRN-EGVVEFAT 232
Query: 157 YDDMKYAIRKLDRSEF 172
Y D+K AI KLD +E
Sbjct: 233 YSDLKNAIDKLDDTEL 248
>gi|452839557|gb|EME41496.1| hypothetical protein DOTSEDRAFT_73793 [Dothistroma septosporum
NZE10]
Length = 327
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 96/181 (53%), Gaps = 16/181 (8%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDAEDAI 62
S+ LY+GNLP + +VE+ F +G I++I L G+ F+E++D DA D +
Sbjct: 7 SNTRLYLGNLPRNATKADVENHFNTHGTGEIMEIKLMN-----GFGFIEYKDAMDARDVV 61
Query: 63 RGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSAS 122
G F G RL V+ A G R + + RR+ +R+ +TGLP S
Sbjct: 62 PAFHGSEFMGERLVVQFARGSNRPREGFEHQPRMAP-----RPRRTVHRMTITGLPFETS 116
Query: 123 WQDLKDHMRRAG-DVCFSQVFRDR---GGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSR 178
WQDLKD R++G DV +S+V R+R G G V+Y + D+ A+ KLD SEF+ + R
Sbjct: 117 WQDLKDFARQSGLDVVYSEVNRERDPSGTGKGYVEYETAADLATAVEKLDNSEFKGSNVR 176
Query: 179 S 179
Sbjct: 177 C 177
>gi|398406965|ref|XP_003854948.1| hypothetical protein MYCGRDRAFT_99129 [Zymoseptoria tritici IPO323]
gi|339474832|gb|EGP89924.1| hypothetical protein MYCGRDRAFT_99129 [Zymoseptoria tritici IPO323]
Length = 333
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 97/186 (52%), Gaps = 17/186 (9%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ S+ LY+GNLP + +VE+ F +G I +I L G+ F+E++D DA
Sbjct: 1 MAEVSNTRLYLGNLPRNATKADVENHFNTHGTGEITEIKLMN-----GFGFIEYKDAMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLP 118
D + G F G RL V+ A G R ++ + RR+ +R+ +TGLP
Sbjct: 56 RDVVPAFHGSEFMGERLVVQFARGSNRPRDGFEQQPRQAP-----RPRRTVHRMTITGLP 110
Query: 119 SSASWQDLKDHMRRAG-DVCFSQVFRDRG----GMTGIVDYTSYDDMKYAIRKLDRSEFR 173
SWQDLKD R++G DV +S+V R+R G V+Y + D+ A+ KLD +EF+
Sbjct: 111 FETSWQDLKDFARQSGLDVVYSEVGRERDSSGTGKGSFVEYETAADLAAAVEKLDNNEFK 170
Query: 174 NAFSRS 179
A R
Sbjct: 171 GATVRC 176
>gi|432882993|ref|XP_004074180.1| PREDICTED: uncharacterized protein LOC101163182 isoform 4 [Oryzias
latipes]
Length = 344
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 92/164 (56%), Gaps = 26/164 (15%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R ++VE F YG I+++DLK GY F+EF+D RDA+DA+ Y
Sbjct: 4 VYIGRLSYRAREKDVERFFKGYGKILEVDLK-----NGYGFVEFDDPRDADDAV-----Y 53
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
+ +G L GGR DRY G R+DYR++V L S SWQDLKD
Sbjct: 54 DLNGKELCGYGRWGGR------DRY---------GPPVRTDYRLIVENLSSRCSWQDLKD 98
Query: 129 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
+MR+AG+V ++ + R G++++ Y DMK A+ KLD +E
Sbjct: 99 YMRQAGEVTYADTHKGRRN-EGVIEFRQYSDMKRALEKLDGTEV 141
>gi|212526968|ref|XP_002143641.1| pre-RNA splicing factor Srp2, putative [Talaromyces marneffei ATCC
18224]
gi|210073039|gb|EEA27126.1| pre-RNA splicing factor Srp2, putative [Talaromyces marneffei ATCC
18224]
Length = 261
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 103/199 (51%), Gaps = 18/199 (9%)
Query: 46 GYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVS 105
G+ F+E+ED DA D + DG +F G RL V+ A G R + ++ S S
Sbjct: 3 GFGFIEYEDAMDARDVVP--DGSDFKGERLTVQFARGPRHKET----FNGPSDRPSAPRP 56
Query: 106 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 164
RR+ +R+ V+GLP+ SWQDLKD R++G DV +S+ R+R G G V++ S+ D+K A+
Sbjct: 57 RRTVFRMQVSGLPTETSWQDLKDFARQSGLDVVYSETTRERDGR-GFVEFESHADLKTAV 115
Query: 165 RKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSY 224
KLD E + + D + + R P R PY SRS R R P+ +
Sbjct: 116 EKLDGRELKGSQVTCVA-----DVQPAEERPPYRDPYRSRSPPR-----RGYPPTDEYDR 165
Query: 225 SPRSRSYSPRGKYSRRSPS 243
R YSPR Y RSP
Sbjct: 166 RGPPRGYSPRPHYRERSPQ 184
>gi|426241491|ref|XP_004014624.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 1 [Ovis
aries]
Length = 344
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 100/174 (57%), Gaps = 17/174 (9%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L + R ++++ F YG +++IDLK GY F+EFED RDA+DA+ +
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLK-----NGYGFVEFEDSRDADDAVYEPNA- 57
Query: 69 NFDGYRLRVELAHGGRRHS---SSMDR-----YSSYSSGG--SRGVSRRSDYRVLVTGLP 118
G R+ VE A G SS D+ YSS + G G R+++R++V L
Sbjct: 58 KLCGERVIVEHARGPXXXXXXFSSHDKGGGGGYSSRRTSGRDKYGPPVRTEFRLIVENLS 117
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ KLD +E
Sbjct: 118 SRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 170
>gi|339239261|ref|XP_003381185.1| 26S protease regulatory subunit 4 [Trichinella spiralis]
gi|316975801|gb|EFV59199.1| 26S protease regulatory subunit 4 [Trichinella spiralis]
Length = 646
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 99/188 (52%), Gaps = 36/188 (19%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG L D R ++E+ F YG I +I LK GY F+EF++ RDA+DA+ +G
Sbjct: 6 VYVGQLTSDIRENDLENFFKGYGRIREITLK-----NGYGFVEFDERRDADDAVHDLNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSS-------GGSRGVSR--------------- 106
G ++RVE+AH S DR++S G RG R
Sbjct: 61 PLLGEKIRVEMAH-----RFSRDRFASGRGGGFRGRYNGDRGYDRSRHGGRWERRRPVNP 115
Query: 107 --RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 164
RS YR+LV L S+ SW++LKD M +AG+VCF+ V+ R GIV++ S M+ A+
Sbjct: 116 PRRSRYRLLVENLSSAISWRELKDFMNQAGEVCFTDVYPQR--REGIVEFESSSAMENAL 173
Query: 165 RKLDRSEF 172
+KL+ E
Sbjct: 174 KKLNGEEL 181
>gi|426241493|ref|XP_004014625.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 2 [Ovis
aries]
Length = 339
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 98/169 (57%), Gaps = 12/169 (7%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L + R ++++ F YG +++IDLK GY F+EFED RDA+DA+ +
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLK-----NGYGFVEFEDSRDADDAVYEPNA- 57
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSY----SSGGSR-GVSRRSDYRVLVTGLPSSASW 123
G R+ VE A G R S Y +SG + G R+++R++V L S SW
Sbjct: 58 KLCGERVIVEHARGPSREGSYSSGGGGYSSRRTSGRDKYGPPVRTEFRLIVENLSSRCSW 117
Query: 124 QDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
QDLKD MR+AG+V ++ ++R G++++ SY DMK A+ KLD +E
Sbjct: 118 QDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 165
>gi|89273959|emb|CAJ82241.1| splicing factor, arginine/serine-rich 5 [Xenopus (Silurana)
tropicalis]
Length = 261
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 93/178 (52%), Gaps = 20/178 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R R+VE F YG I +I+LK G+ F+EF+D+RDA+DA+ +G
Sbjct: 6 VFIGRLSPHARERDVEKFFKGYGRIREINLK-----NGFGFVEFDDHRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDR-------------YSSYSSGGSR-GVSRRSDYRVLV 114
R+ +E A R M Y +SGG R G R+++R++V
Sbjct: 61 VLCNERVTIEHARNRRGRGGMMGGGGGGGGRYPNRFAYRQSNSGGPRYGPPVRTEHRIIV 120
Query: 115 TGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
L S SWQDLKD MR+AG+V + R G+V++ SY DMK A+ KLD E
Sbjct: 121 ENLSSRVSWQDLKDFMRKAGEVTYVDAHRSNRN-EGVVEFASYTDMKNALDKLDGVEL 177
>gi|348517719|ref|XP_003446380.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Oreochromis
niloticus]
Length = 293
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 101/270 (37%), Positives = 137/270 (50%), Gaps = 30/270 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EF+D RDAEDA+ Y
Sbjct: 6 IFIGRLSPSAREKDVERFFKGYGRIRDIDLKR-----GFGFVEFDDPRDAEDAV-----Y 55
Query: 69 NFDGYRL---RVELAHGGRRHSSSM------------DRYS--SYSSGGSRGVSRRSDYR 111
DG L RV + H R DRY S +S R++ R
Sbjct: 56 ELDGKELCNERVTIEHARVRLRGGRGRGGGGGGGRFSDRYGRGSQNSRSRNPPPMRTENR 115
Query: 112 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSE 171
++V L S SWQDLKD MR+AG+V F+ R + G+V++ S+ D+K A+ KL E
Sbjct: 116 LIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASHSDLKNALDKLSGKE 174
Query: 172 FRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSY 231
+ ++ RS S S SRS SR RS S RSRSP+++ + S RSRS
Sbjct: 175 INGRKIKLIEAAKKRSRSRSRSESSSRSRSRSRGRSASRSPRRSRSPAKAHNRS-RSRSG 233
Query: 232 SPRGKYSR-RSPSLSPARSASQRSPSGSPP 260
SP G S S S PA+ +S+ S S +PP
Sbjct: 234 SPAGGASSPTSKSKEPAKRSSKMSKSATPP 263
>gi|154304025|ref|XP_001552418.1| pre-mRNA splicing factor [Botryotinia fuckeliana B05.10]
Length = 308
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 95/180 (52%), Gaps = 17/180 (9%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP +VE F +G I +I L G+ F+E++D DA
Sbjct: 1 MTEVSSTRLYLGNLPRSATKADVEAHFNTHGTGEITEIKLMN-----GFGFIEYKDAMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSR--RSDYRVLVTG 116
D + G +F G RL V+ A G R + +++ R R R+ +R+ ++G
Sbjct: 56 RDVVPAFHGSDFMGERLTVQFARGTRNRDT-------FANNPERTAPRPRRTPHRMQISG 108
Query: 117 LPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNA 175
LP SWQDLKD R++ DV +S+ RDR G V++ + D+K A+ KLD EF+ A
Sbjct: 109 LPGETSWQDLKDFARQSSLDVVYSETGRDRDGKGSFVEFETAADLKTAVEKLDGREFKGA 168
>gi|393216709|gb|EJD02199.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 270
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 92/170 (54%), Gaps = 16/170 (9%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
+R LY+G LP DTR EV F +GP+VD+ + G+ F+EFE RDAEDA+R
Sbjct: 2 ARRLYLGKLPPDTRTDEVTKYFDGFGPLVDVRVMT-----GFGFVEFESSRDAEDALRDI 56
Query: 66 DGYNFDGYRLRVELA--HGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASW 123
G F G + VE A + GRR+ Y S R R + R+ V + SW
Sbjct: 57 RGKPFLGSNIVVEFAKENRGRRND-----YEDRSFAPRR---RPAGIRISVDNISKDTSW 108
Query: 124 QDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
QDLKD R AG V F+ + R+ G GI++Y S DD + A+++LD E R
Sbjct: 109 QDLKDFGREAGSVSFADIDREVPGR-GILEYASRDDAEQAVKELDGKELR 157
>gi|347441498|emb|CCD34419.1| hypothetical protein [Botryotinia fuckeliana]
Length = 324
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 95/180 (52%), Gaps = 17/180 (9%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP +VE F +G I +I L G+ F+E++D DA
Sbjct: 1 MTEVSSTRLYLGNLPRSATKADVEAHFNTHGTGEITEIKLMN-----GFGFIEYKDAMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSR--RSDYRVLVTG 116
D + G +F G RL V+ A G R + +++ R R R+ +R+ ++G
Sbjct: 56 RDVVPAFHGSDFMGERLTVQFARGTRNRDT-------FANNPERTAPRPRRTPHRMQISG 108
Query: 117 LPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNA 175
LP SWQDLKD R++ DV +S+ RDR G V++ + D+K A+ KLD EF+ A
Sbjct: 109 LPGETSWQDLKDFARQSSLDVVYSETGRDRDGKGSFVEFETAADLKTAVEKLDGREFKGA 168
>gi|291224545|ref|XP_002732262.1| PREDICTED: splicing factor, arginine/serine-rich 4-like
[Saccoglossus kowalevskii]
Length = 274
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 110/211 (52%), Gaps = 36/211 (17%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L TR R+VE F YG + +I+LK G+ F+EFED RD++DA+ +G
Sbjct: 30 VYIGRLSYQTRERDVERFFRGYGRLREINLK-----NGFGFVEFEDPRDSDDAVYELNGK 84
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSS-GGSR-----------------GVSR---- 106
G R+ +E A G R R S YS+ GG R GV +
Sbjct: 85 ELCGERVTIEHARGPVRRDY---RDSGYSNRGGDRDSYRSDRGGFGPPRRRGGVDKYGPP 141
Query: 107 -RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIR 165
R+++R++V L S SWQDLKD+MR+AG+V F+ + G+V+ S+ D+K I
Sbjct: 142 TRTEHRLIVENLSSRCSWQDLKDYMRQAGEVTFADAHKQHKN-EGVVELASHSDLKNVIA 200
Query: 166 KLDRSEFRNAFSRSYVRVREYDSRRSYSRSP 196
KLD +E S +++ E +R SRSP
Sbjct: 201 KLDGTE----ISGRKIKLIEDRPKRHRSRSP 227
>gi|346977018|gb|EGY20470.1| pre-mRNA splicing factor [Verticillium dahliae VdLs.17]
Length = 322
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/255 (34%), Positives = 123/255 (48%), Gaps = 32/255 (12%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP + EVE F +G I +I L G+ F+E++D DA
Sbjct: 1 MTEVSSTRLYLGNLPRNVTKAEVEGHFATHGTGEITEIKLMN-----GFGFIEYKDAMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRH---SSSMDRYSSYSSGGSRGVSR--RSDYRVL 113
D + DG +F G RL V+ A G R ++ ++ ++ R R R+ +R+
Sbjct: 56 RDVVP--DGSDFMGERLTVQFARGTRHRDGGAAPGGFNNNNNTHNERAAPRPRRTQHRMQ 113
Query: 114 VTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
+TGLP+ SWQDLKD R++ DV +S+ RD G G V++ + D++ A+ KLD EF
Sbjct: 114 ITGLPTDTSWQDLKDFARQSSLDVVYSETGRD-GNGRGFVEFETAADLRTAVEKLDGREF 172
Query: 173 RNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRS--RS 230
+ + P P +R RSRSP R P Y R R
Sbjct: 173 KGKPVNCVADTQ-----------PDIPPRDNRGRSRSPNGRRPPPPPPVDDYDRRGPPRG 221
Query: 231 YSPRG---KYSRRSP 242
YSPRG Y RSP
Sbjct: 222 YSPRGYRDGYRDRSP 236
>gi|432882987|ref|XP_004074177.1| PREDICTED: uncharacterized protein LOC101163182 isoform 1 [Oryzias
latipes]
Length = 372
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 92/168 (54%), Gaps = 10/168 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R ++VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYRAREKDVERFFKGYGKILEVDLK-----NGYGFVEFDDPRDADDAVYDLNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR----GVSRRSDYRVLVTGLPSSASWQ 124
G R+ VE G RR S G R+DYR++V L S SWQ
Sbjct: 59 ELCGERVIVEHTKGPRRDGGYGGGGRSGYGRWGGRDRYGPPVRTDYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
DLKD+MR+AG+V ++ + R G++++ Y DMK A+ KLD +E
Sbjct: 119 DLKDYMRQAGEVTYADTHKGRRN-EGVIEFRQYSDMKRALEKLDGTEV 165
>gi|52345470|ref|NP_001004783.1| serine/arginine-rich splicing factor 5 [Xenopus (Silurana)
tropicalis]
gi|49522053|gb|AAH74518.1| splicing factor, arginine/serine-rich 5 [Xenopus (Silurana)
tropicalis]
gi|89273344|emb|CAJ81460.1| splicing factor, arginine/serine-rich 5 [Xenopus (Silurana)
tropicalis]
Length = 272
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 91/172 (52%), Gaps = 14/172 (8%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EF+D RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFDDPRDADDAVYELDGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSM-------DRYSSYSSGGSRGVS-RRSDYRVLVTGLPSS 120
R+ +E A R DR+SS G R R++ R++V L S
Sbjct: 61 ELCNERVTIEHARLRSRGGPRGLGRGRYNDRFSSRRPRGDRSAPPIRTENRLIVENLSSR 120
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
SWQDLKD MR+AG+V F+ R + G+V++ SY D+K AI KL E
Sbjct: 121 VSWQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYSDLKNAIEKLSGKEI 171
>gi|392567011|gb|EIW60186.1| hypothetical protein TRAVEDRAFT_27854 [Trametes versicolor
FP-101664 SS1]
Length = 288
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 90/168 (53%), Gaps = 12/168 (7%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
+R LY+G LP D R EV F YG IVD + G+ F+EFE RDAEDA++
Sbjct: 2 ARRLYLGRLPPDVRSEEVSKFFDGYGRIVDCRVMT-----GFGFVEFESSRDAEDAMQNF 56
Query: 66 DGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQD 125
+G NF G + VE A + R Y + + R +RV+V+G+ SWQD
Sbjct: 57 NGKNFMGSNIVVEFAK------ETRPRRDPYDADRAVRARRPPGFRVIVSGISRDTSWQD 110
Query: 126 LKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
LKD R AG V ++ + RD G GI++Y S +D + A++ LD + R
Sbjct: 111 LKDFGREAGSVSYADIDRDNPG-EGILEYLSREDSERAVKDLDGRDLR 157
>gi|432882991|ref|XP_004074179.1| PREDICTED: uncharacterized protein LOC101163182 isoform 3 [Oryzias
latipes]
Length = 388
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 92/168 (54%), Gaps = 10/168 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R ++VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYRAREKDVERFFKGYGKILEVDLK-----NGYGFVEFDDPRDADDAVYDLNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR----GVSRRSDYRVLVTGLPSSASWQ 124
G R+ VE G RR S G R+DYR++V L S SWQ
Sbjct: 59 ELCGERVIVEHTKGPRRDGGYGGGGRSGYGRWGGRDRYGPPVRTDYRLIVENLSSRCSWQ 118
Query: 125 DLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
DLKD+MR+AG+V ++ + R G++++ Y DMK A+ KLD +E
Sbjct: 119 DLKDYMRQAGEVTYADTHKGRRN-EGVIEFRQYSDMKRALEKLDGTEV 165
>gi|405963003|gb|EKC28616.1| Splicing factor, arginine/serine-rich 4 [Crassostrea gigas]
Length = 553
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 99/212 (46%), Gaps = 46/212 (21%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M +R +Y+G L R R+VE F YG + D+ LK GY F+EFEDYRDA+D
Sbjct: 236 MKNRMGTRVYIGRLSHHARERDVERFFKGYGRLRDVMLK-----NGYGFVEFEDYRDADD 290
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSY---------SSGGSRGVSRRSDYR 111
A+ +G + G R+ VE A GG R + Y Y G R++YR
Sbjct: 291 AVYELNGKDLAGERVIVEHARGGPRGDDRRNSYRDYPPARRSRGGGGRDKYGPPTRTEYR 350
Query: 112 VLVTGLPSSASWQ-------------------------------DLKDHMRRAGDVCFSQ 140
++V L S SWQ DLKD+MR+AG+V ++
Sbjct: 351 LIVENLSSRVSWQVSWFHCEDELGNHATTLTVGGAFRVQSTAVEDLKDYMRQAGEVTYAD 410
Query: 141 VFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
++ GIV++ SY DMK A+ KLD +E
Sbjct: 411 AHKEHKN-EGIVEFASYSDMKNAVSKLDGTEI 441
>gi|432864638|ref|XP_004070386.1| PREDICTED: uncharacterized protein LOC101162527 isoform 2 [Oryzias
latipes]
Length = 373
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 98/184 (53%), Gaps = 26/184 (14%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R ++++ F YG ++++D+K GY F+EFED RDA+DA+ +G
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGKLLEVDMK-----NGYGFVEFEDNRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR--------------------GVSRRS 108
G R+ VE A G RR SS+ G S G R+
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYGGGSSWGGGRSSGYSSSSNSSSSRTRVGRDKYGPPVRT 118
Query: 109 DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLD 168
+YR++V L S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ KLD
Sbjct: 119 EYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNQ-GVIEFRSYSDMKRALDKLD 177
Query: 169 RSEF 172
++
Sbjct: 178 GTDI 181
>gi|440637919|gb|ELR07838.1| hypothetical protein GMDG_00459 [Geomyces destructans 20631-21]
Length = 296
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 94/176 (53%), Gaps = 10/176 (5%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M+ SS LY+GNLP D +VE F +G ++K+ G+ F+E+ED DA D
Sbjct: 1 MTEVSSTRLYLGNLPRDATKADVEAHFATHGTGTIKEIKLMN---GFGFIEYEDAMDARD 57
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
+ G G RL V+ A G R+ D +++ R RR+ +R+ ++GL
Sbjct: 58 VVPAFHGSELKGDRLTVQFARGSRQR----DNFAATDRTAPR--PRRTPHRMQISGLSGE 111
Query: 121 ASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNA 175
SWQDLKD R++ DV +S+ RDR G V++ + D++ A+ KLD EF+ A
Sbjct: 112 TSWQDLKDFARQSSLDVVYSETGRDRDGKGSFVEFETAADLRTAVEKLDGREFKGA 167
>gi|313227405|emb|CBY22552.1| unnamed protein product [Oikopleura dioica]
Length = 318
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/224 (33%), Positives = 101/224 (45%), Gaps = 51/224 (22%)
Query: 8 TLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDG 67
++++G LP R R+++D F YG IVDI +K YAF+EFED RDA DA++ D
Sbjct: 7 SVWMGGLPERVRSRDIDDFFKGYGRIVDISIKTK-----YAFVEFEDERDAADAVKDLDD 61
Query: 68 YNFDGYRLRVELAHGGRR-----HSSSMDRYSSYSSGGS--------------------- 101
+G R+R+E++ G + + RY SYS S
Sbjct: 62 QKLNGSRVRLEVSKGCKDKYRDFQRTGRVRYRSYSKSVSPGRRRHRSRSPVGKGRSRSRS 121
Query: 102 --RGVSRRSDY-----------------RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVF 142
RG RR + V V L S SWQDLKD MR+AG+V +
Sbjct: 122 PARGSDRRETFYSKPAYKKYGAPEKTRWTVEVDNLSSRCSWQDLKDFMRKAGEVTYGDAH 181
Query: 143 -RDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVRE 185
D G G+V Y DD K AI +LD EF + +VRE
Sbjct: 182 GSDIGRNRGVVCYEREDDAKRAIEELDGREFNGRDVKLAFKVRE 225
>gi|159163525|pdb|1X4A|A Chain A, Solution Structure Of Rrm Domain In Splicing Factor Sf2
Length = 109
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/81 (61%), Positives = 60/81 (74%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 25 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 84
Query: 69 NFDGYRLRVELAHGGRRHSSS 89
++DGYRLRVE GR S
Sbjct: 85 DYDGYRLRVEFPRSGRGTGSG 105
>gi|432936464|ref|XP_004082128.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 2
[Oryzias latipes]
Length = 289
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 92/172 (53%), Gaps = 14/172 (8%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R R+VE F YG I +I+LK G+ F+EF+D+RDA+DA+ +G
Sbjct: 23 VFIGRLSPQARERDVEKFFKGYGRIREINLK-----NGFGFVEFDDHRDADDAVYELNGK 77
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSG-------GSR-GVSRRSDYRVLVTGLPSS 120
R+ +E A R + + G GSR G R+++R++V L S
Sbjct: 78 ELLSERVTIEHARSRRGRGGGPPGMARFGGGYRQSRNTGSRYGPPVRTEHRLIVENLSSR 137
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
SWQDLKD MR+AG+V F R G+V++ S D+K AI KLD +E
Sbjct: 138 ISWQDLKDLMRKAGEVTFVDAHRPTKN-EGVVEFASRSDLKNAISKLDGTEL 188
>gi|348519443|ref|XP_003447240.1| PREDICTED: hypothetical protein LOC100690923 isoform 1 [Oreochromis
niloticus]
Length = 390
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 94/167 (56%), Gaps = 9/167 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R ++VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYRAREKDVERFFKGYGKILEVDLK-----NGYGFVEFDDPRDADDAVYDLNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR---GVSRRSDYRVLVTGLPSSASWQD 125
G R+ VE G RR Y G R G R+DYR++V L S SWQD
Sbjct: 59 ELCGERVIVEHTRGPRRDGGYGGGGGGYGRWGGRDRYGPPIRTDYRLIVENLSSRCSWQD 118
Query: 126 LKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
LKD+MR+AG+V ++ + R G++++ Y DMK A+ KLD +E
Sbjct: 119 LKDYMRQAGEVTYADTHKGRKN-EGVIEFRLYSDMKRALEKLDGTEV 164
>gi|54020785|ref|NP_001005638.1| keratin 5, gene 1 [Xenopus (Silurana) tropicalis]
gi|49250524|gb|AAH74634.1| keratin 5, gene 1 [Xenopus (Silurana) tropicalis]
Length = 262
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 96/179 (53%), Gaps = 21/179 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R R+VE F YG I +I+LK G+ F+EF+D+RDA+DA+ +G
Sbjct: 6 VFIGRLSPHARERDVEKFFKGYGRIREINLK-----NGFGFVEFDDHRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSM-----------DRYS---SYSSGGSR-GVSRRSDYRVL 113
R+ +E A R M +R++ S S G SR G R+++R++
Sbjct: 61 VLCNERVTIEHARNRRGRGGMMGGGGGGGGRYPNRFAYRQSNSGGPSRYGPPVRTEHRII 120
Query: 114 VTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
V L S SWQDLKD MR+AG+V + R G+V++ SY DMK A+ KLD E
Sbjct: 121 VENLSSRVSWQDLKDFMRKAGEVTYVDAHRSNRN-EGVVEFASYTDMKNALDKLDGVEL 178
>gi|432936462|ref|XP_004082127.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 1
[Oryzias latipes]
Length = 272
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 92/172 (53%), Gaps = 14/172 (8%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R R+VE F YG I +I+LK G+ F+EF+D+RDA+DA+ +G
Sbjct: 6 VFIGRLSPQARERDVEKFFKGYGRIREINLK-----NGFGFVEFDDHRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSG-------GSR-GVSRRSDYRVLVTGLPSS 120
R+ +E A R + + G GSR G R+++R++V L S
Sbjct: 61 ELLSERVTIEHARSRRGRGGGPPGMARFGGGYRQSRNTGSRYGPPVRTEHRLIVENLSSR 120
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
SWQDLKD MR+AG+V F R G+V++ S D+K AI KLD +E
Sbjct: 121 ISWQDLKDLMRKAGEVTFVDAHRPTKN-EGVVEFASRSDLKNAISKLDGTEL 171
>gi|116202487|ref|XP_001227055.1| hypothetical protein CHGG_09128 [Chaetomium globosum CBS 148.51]
gi|88177646|gb|EAQ85114.1| hypothetical protein CHGG_09128 [Chaetomium globosum CBS 148.51]
Length = 324
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 99/184 (53%), Gaps = 19/184 (10%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP + +VE F +G I +I L G+ F+E++D DA
Sbjct: 1 MTEVSSTRLYLGNLPRNATKADVEAHFATHGTGEITEIKLMN-----GFGFIEYKDAMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDR------YSSYSSGGSRGVSRRSDYRV 112
D + DG +F G RL V+ A G R Y+ + R RR+ +R+
Sbjct: 56 RDVVP--DGSDFMGERLTVQFARGSRHREQGGGGGGGGGGYNHDRNSAPR--PRRTPHRM 111
Query: 113 LVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSE 171
++GLP+ SWQDLKD R++G DV +S+ R+ G G V++ + D++ A+ KLD E
Sbjct: 112 QISGLPNDTSWQDLKDFARQSGLDVVYSETNRN-GSNEGFVEFETAADLRSAVEKLDNRE 170
Query: 172 FRNA 175
F+NA
Sbjct: 171 FKNA 174
>gi|348519445|ref|XP_003447241.1| PREDICTED: hypothetical protein LOC100690923 isoform 2 [Oreochromis
niloticus]
Length = 386
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 91/164 (55%), Gaps = 7/164 (4%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R ++VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYRAREKDVERFFKGYGKILEVDLK-----NGYGFVEFDDPRDADDAVYDLNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
G R+ VE G RR G R+DYR++V L S SWQDLKD
Sbjct: 59 ELCGERVIVEHTRGPRRDGGYG-GGGGGGGRDRYGPPIRTDYRLIVENLSSRCSWQDLKD 117
Query: 129 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
+MR+AG+V ++ + R G++++ Y DMK A+ KLD +E
Sbjct: 118 YMRQAGEVTYADTHKGRKN-EGVIEFRLYSDMKRALEKLDGTEV 160
>gi|321472329|gb|EFX83299.1| hypothetical protein DAPPUDRAFT_195083 [Daphnia pulex]
Length = 221
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 97/178 (54%), Gaps = 20/178 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G LP + R++E F YG + ++ +K GY F+EFEDYRDA+DA+ +G
Sbjct: 5 VYIGGLPYRVKERDIERFFRGYGKLREVLIK-----NGYGFVEFEDYRDADDAVYELNGK 59
Query: 69 NFDGYRLRVELAHGGRRHSSSMD-----------RYSSYSSGGS---RGVSRRSDYRVLV 114
G R+ VE A G R D R S++ + G R+DYR++V
Sbjct: 60 ELCGERVSVEHARGSGRRGGRDDRNDRDHRDRGSRRSNWMDNNAPPRYGPPTRTDYRLVV 119
Query: 115 TGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
L S SWQDLKD+MR+AG+V ++ + G+V++ SY D+K AI KLD ++
Sbjct: 120 ENLSSRVSWQDLKDYMRQAGEVTYADAHKQHRN-EGVVEFASYSDLKTAIEKLDGTDL 176
>gi|402085268|gb|EJT80166.1| hypothetical protein, variant [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 317
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/248 (32%), Positives = 109/248 (43%), Gaps = 39/248 (15%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLF--YKYGPIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP +V F + G I +I L G+ F+E+ED DA
Sbjct: 1 MTEVSSTRLYLGNLPRQATKEDVASHFGAHGTGKITEIKLMN-----GFGFIEYEDMMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSR--RSDYRVLVTG 116
D + G F G RL V+ A G R + G R R R+ YR+ ++G
Sbjct: 56 RDVVPAFHGSQFMGERLTVQFARGSRNRDGGGGAGNGSGFSGERSAPRPRRTPYRMQISG 115
Query: 117 LPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNA 175
LP+ SWQDLKD R++ DV +S+ R G G V++ + D+ A+ LD EF+
Sbjct: 116 LPNDTSWQDLKDFARQSQLDVVYSETGRSNNG-EGFVEFETAADLATAVDALDGKEFKEK 174
Query: 176 FSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYSPRG 235
R + + P R RSRSP P RSY+P G
Sbjct: 175 VVRCVANAQ------------ADPPVRDRGRSRSP---------------PGRRSYAPPG 207
Query: 236 -KYSRRSP 242
Y RR P
Sbjct: 208 DDYDRRGP 215
>gi|147907282|ref|NP_001079543.1| keratin 5, gene 1 b [Xenopus laevis]
gi|28278124|gb|AAH44085.1| MGC52712 protein [Xenopus laevis]
Length = 261
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 95/180 (52%), Gaps = 25/180 (13%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R R+VE F YG I +I+LK G+ F+EF+D+RDA+DA+ +G
Sbjct: 6 VFIGRLSPHARERDVEKFFKGYGRIREINLK-----NGFGFVEFDDHRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSM------------DRYS---SYSSGGSR-GVSRRSDYRV 112
R+ +E A R H +R++ S S G SR G R+++R+
Sbjct: 61 VLCSERVTIEHA---RNHRGRGGMMGGGGGGRYPNRFAYRQSNSGGNSRYGPPVRTEHRI 117
Query: 113 LVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
+V L S SWQDLK MR+AG+V + R G+V++ SY DMK A+ KLD E
Sbjct: 118 IVENLSSRVSWQDLKGFMRKAGEVTYVDAHRSNRN-EGVVEFASYTDMKSALDKLDGVEL 176
>gi|354472339|ref|XP_003498397.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Cricetulus
griseus]
Length = 476
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 84/140 (60%), Gaps = 7/140 (5%)
Query: 37 DLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSY 96
D+K P GY F+EF+D RDA+DA+ +G + G R+ VE A G RR S S Y
Sbjct: 14 DVKEPQ--AGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSYGSGRSGY 71
Query: 97 S---SGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIV 152
SG + G R++YR++V L S SWQDLKD+MR+AG+V ++ + R G++
Sbjct: 72 GYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKN-EGVI 130
Query: 153 DYTSYDDMKYAIRKLDRSEF 172
++ SY DMK A+ KLD +E
Sbjct: 131 EFVSYSDMKRALEKLDGTEV 150
>gi|402085269|gb|EJT80167.1| hypothetical protein GGTG_00170 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 318
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/248 (32%), Positives = 109/248 (43%), Gaps = 39/248 (15%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLF--YKYGPIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP +V F + G I +I L G+ F+E+ED DA
Sbjct: 1 MTEVSSTRLYLGNLPRQATKEDVASHFGAHGTGKITEIKLMN-----GFGFIEYEDMMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSR--RSDYRVLVTG 116
D + G F G RL V+ A G R + G R R R+ YR+ ++G
Sbjct: 56 RDVVPAFHGSQFMGERLTVQFARGSRNRDGGGGAGNGSGFSGERSAPRPRRTPYRMQISG 115
Query: 117 LPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNA 175
LP+ SWQDLKD R++ DV +S+ R G G V++ + D+ A+ LD EF+
Sbjct: 116 LPNDTSWQDLKDFARQSQLDVVYSETGRSNNG-EGFVEFETAADLATAVDALDGKEFKEK 174
Query: 176 FSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYSPRG 235
R + + P R RSRSP P RSY+P G
Sbjct: 175 VVRCVANAQ------------ADPPVRDRGRSRSP---------------PGRRSYAPPG 207
Query: 236 -KYSRRSP 242
Y RR P
Sbjct: 208 DDYDRRGP 215
>gi|198421232|ref|XP_002126906.1| PREDICTED: similar to splicing factor, arginine/serine-rich 4
isoform 1 [Ciona intestinalis]
Length = 272
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 93/169 (55%), Gaps = 12/169 (7%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R +VE F YG I D+ LK G+ F+ F+D RDA+DAI +G
Sbjct: 7 VYIGRLSHRARENDVEHFFRGYGKINDLMLK-----NGFGFVIFDDERDADDAIHDLNGK 61
Query: 69 NFDGYRLRVELAHG-----GRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASW 123
+ G R+ +E+A G G SSS ++G+ YR++V L S +W
Sbjct: 62 SLCGERVMLEIAKGTPRGPGGESSSSSYYQQQQPRSSTKGIPNHG-YRLIVENLSSRVTW 120
Query: 124 QDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
QDLKD+MR+ G+V ++ R R G+V+++S +MKYAI KL+ +E
Sbjct: 121 QDLKDYMRQCGEVVYADANRYRRN-EGVVEFSSRKEMKYAIEKLNGTEI 168
>gi|53130660|emb|CAG31659.1| hypothetical protein RCJMB04_9e4 [Gallus gallus]
Length = 165
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 88/155 (56%), Gaps = 8/155 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VG+L R R+VE F YG I +I LK G+ F+EFED+RDA+DAI +G
Sbjct: 6 VFVGHLSSRARERDVEKFFKGYGRIREIHLK-----NGFGFVEFEDHRDADDAIYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR--GVSRRSDYRVLVTGLPSSASWQDL 126
R+ +E A R R+S YS GS G R+++R++V L S SWQDL
Sbjct: 61 ELCDERVTIEHARARRGRGRFAQRFSYYSQSGSSRYGPPVRTEHRIIVENLSSRISWQDL 120
Query: 127 KDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMK 161
KD MR+AG+V + R+ G+V++ SY D++
Sbjct: 121 KDVMRKAGEVTYVDAHRNNRN-EGVVEFASYSDIE 154
>gi|358398894|gb|EHK48245.1| hypothetical protein TRIATDRAFT_298403 [Trichoderma atroviride IMI
206040]
Length = 312
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 81/245 (33%), Positives = 119/245 (48%), Gaps = 35/245 (14%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP + +VE F +G I ++ L G+ F+E++D DA
Sbjct: 1 MTEVSSTRLYLGNLPRNATKADVEAHFATHGTGEITEVKLMN-----GFGFIEYKDAMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLP 118
D + G +F G RL V+ A G R M + RR+ +R+ +TGLP
Sbjct: 56 RDVVPAFHGSDFMGERLTVQFARGARHREGGMGHERAPPR------PRRTPHRMQITGLP 109
Query: 119 SSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFS 177
+ SWQDLKD R++ DV +S+ RD G G V++ + D++ A+ KLD EF+ A
Sbjct: 110 NDTSWQDLKDFARQSSLDVVYSETGRDSNG-RGFVEFETAADLRTAVEKLDGREFKGARV 168
Query: 178 RSYVRVR-EYDSR--RSYSRSPSRSPY-----------------YSRSRSRSPYYSRSRS 217
+ V + + R R+ SRSP R PY Y+R + Y R RS
Sbjct: 169 QCLVDTQPDMPPRDPRARSRSPGRRPYPPPQFDNYDRRGGPHRGYNREGAAPSYGYRDRS 228
Query: 218 PSRSW 222
P R +
Sbjct: 229 PRREY 233
>gi|395504171|ref|XP_003756430.1| PREDICTED: serine/arginine-rich splicing factor 5 [Sarcophilus
harrisii]
Length = 266
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 92/170 (54%), Gaps = 12/170 (7%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EFED RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSAS 122
R+ +E A R RYS +SS R R R++ R++V L S S
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVS 120
Query: 123 WQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
WQDLKD MR+AG+V F+ R + G+V++ SY D+K AI KL E
Sbjct: 121 WQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYSDLKNAIEKLSGKEI 169
>gi|126282694|ref|XP_001370225.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Monodelphis
domestica]
Length = 265
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 92/170 (54%), Gaps = 12/170 (7%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EFED RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSAS 122
R+ +E A R RYS +SS R R R++ R++V L S S
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVS 120
Query: 123 WQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
WQDLKD MR+AG+V F+ R + G+V++ SY D+K AI KL E
Sbjct: 121 WQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYSDLKNAIEKLSGKEI 169
>gi|344273957|ref|XP_003408785.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Loxodonta
africana]
Length = 271
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 92/170 (54%), Gaps = 12/170 (7%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EFED RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIKDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSAS 122
R+ +E A R RYS +SS R R R++ R++V L S S
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVS 120
Query: 123 WQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
WQDLKD MR+AG+V F+ R + G+V++ SY D+K AI KL E
Sbjct: 121 WQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYGDLKNAIEKLSGKEI 169
>gi|322694046|gb|EFY85887.1| pre-mRNA splicing factor [Metarhizium acridum CQMa 102]
Length = 314
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 86/258 (33%), Positives = 124/258 (48%), Gaps = 39/258 (15%)
Query: 1 MSSRSSRT-LYVGNLPGDTRMREVEDLFYKYGP--IVDIDLKIPPRPPGYAFLEFEDYRD 57
M++ S T LY+GNLP + ++E F +G I ++ L G+ F+E++D D
Sbjct: 1 MTTEVSNTRLYLGNLPRNATKADIEAHFATHGTGDITEVKLMN-----GFGFIEYKDPMD 55
Query: 58 AEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGL 117
A D + DG +F G RL V+ A G R+ S + RR+ +R+ +TGL
Sbjct: 56 ARDVVP--DGSDFMGERLTVQFARGPRQRESGFSGHERAPP-----RPRRTPHRMQITGL 108
Query: 118 PSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAF 176
P+ SWQDLKD R+ G DV +S+ RD G G V+Y + D++ A+ KLD EF+
Sbjct: 109 PNETSWQDLKDFARQPGLDVVYSETGRDSNGR-GFVEYETAADLRTAVDKLDGREFKGNR 167
Query: 177 SRSYV-------------RVREYDSRRSYSRSPSRSPYYSR--------SRSRSPYYSRS 215
+ R R RR Y+ P+R Y R +R PY R
Sbjct: 168 VQCIADTQPDMPPRDGRGRSRSPGGRRPYNNMPTRFDEYDRRGPPPRGYNRDPGPYGYRD 227
Query: 216 RSPSRSWSYSPRSRSYSP 233
RSP R + Y R+R SP
Sbjct: 228 RSPRREY-YEDRARYRSP 244
>gi|432898455|ref|XP_004076510.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Oryzias
latipes]
Length = 222
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/71 (67%), Positives = 57/71 (80%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R ++VEDLFYKYG I DIDLK P +AF++FED RDAEDA+ GRDGY
Sbjct: 17 IYVGNLPPDIRSKDVEDLFYKYGSIRDIDLKNRRGGPPFAFVQFEDPRDAEDAVYGRDGY 76
Query: 69 NFDGYRLRVEL 79
++DGYRLRVE
Sbjct: 77 DYDGYRLRVEF 87
Score = 43.9 bits (102), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 34/49 (69%), Gaps = 4/49 (8%)
Query: 137 CFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 184
C++ VFRD TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 114 CYADVFRD---GTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 159
>gi|390597697|gb|EIN07096.1| hypothetical protein PUNSTDRAFT_71302 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 282
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 91/169 (53%), Gaps = 13/169 (7%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
++R LY+G LP DTR +V F YG IVD + G+ F+EFE RDAEDA+
Sbjct: 2 AARRLYLGRLPPDTRSEDVSKFFDGYGHIVDCRVMT-----GFGFVEFESTRDAEDALNH 56
Query: 65 RDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQ 124
+G F+G + +E A S R Y + R R R++V+G+ SWQ
Sbjct: 57 FNGKPFNGANIVIEFA------KESRPRRDVYEADRPR-ARRPPGIRLIVSGVSRDTSWQ 109
Query: 125 DLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
DLKD R AG+V ++ + RD G GI++Y + +D A+R+LD + R
Sbjct: 110 DLKDFGREAGNVSYADIDRDHPG-EGILEYLTREDADRAVRELDGKDLR 157
>gi|389748594|gb|EIM89771.1| hypothetical protein STEHIDRAFT_128672 [Stereum hirsutum FP-91666
SS1]
Length = 276
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 109/232 (46%), Gaps = 22/232 (9%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
SR LY+G LP D R +V F YG IVD + G+ F+EFE RDAEDA+
Sbjct: 2 SRRLYLGRLPTDARTDDVSKFFEGYGKIVDCRVMT-----GFGFVEFESSRDAEDALNHF 56
Query: 66 DGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQD 125
+G F G L VE A S R Y R R R++V+G+ SWQD
Sbjct: 57 NGKPFMGTNLVVEFAK------ESRPRRDPYDDRAPRA-RRPPGIRIIVSGISRDTSWQD 109
Query: 126 LKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVRE 185
LKD R AG V F+ + RD G G+++Y + +D + A++ LD + R VRV
Sbjct: 110 LKDFGREAGSVSFADIERDVPGQ-GVLEYLAREDAERAVKDLDGKDLRG----QPVRVAL 164
Query: 186 YDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYSPRGKY 237
+ R + S S Y R R P Y R SY RSRS PR Y
Sbjct: 165 SEDRGADSYSRRDDRYERRDRYERPSYRDERP-----SYRGRSRSPPPRRHY 211
>gi|426233598|ref|XP_004023549.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 5 [Ovis aries]
Length = 274
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 92/170 (54%), Gaps = 12/170 (7%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EFED RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGXIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSAS 122
R+ +E A R RYS +SS R R R++ R++V L S S
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVS 120
Query: 123 WQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
WQDLKD MR+AG+V F+ R + G+V++ SY D+K AI KL E
Sbjct: 121 WQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYGDLKNAIEKLSGKEI 169
>gi|417398268|gb|JAA46167.1| Putative serine/arginine-rich splicing factor 5 [Desmodus rotundus]
Length = 278
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 92/170 (54%), Gaps = 12/170 (7%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EFED RDA+DA+ DG
Sbjct: 6 VFIGRLNPSAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSAS 122
R+ +E A R RYS +SS R R R++ R++V L S S
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVS 120
Query: 123 WQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
WQDLKD MR+AG+V F+ R + G+V++ SY D+K AI KL E
Sbjct: 121 WQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYGDLKNAIEKLSGKEI 169
>gi|348515955|ref|XP_003445505.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 2
[Oreochromis niloticus]
Length = 258
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 88/164 (53%), Gaps = 26/164 (15%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R R+VE F YG I +I+LK G+ F+EF+D+RDA+DA+ Y
Sbjct: 6 VFIGRLSPHARERDVEKFFKGYGRIREINLK-----NGFGFVEFDDHRDADDAV-----Y 55
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
+G L E R S +RY G R+D+R++V L S SWQDLKD
Sbjct: 56 ELNGKELCSE------RSLSGPNRY---------GPPVRTDHRLVVENLSSRTSWQDLKD 100
Query: 129 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
MR+AG+V F R G+V++ S DMK AI KLD +E
Sbjct: 101 LMRKAGEVTFVDAHRPTKN-EGVVEFASRSDMKNAISKLDGTEL 143
>gi|119628062|gb|EAX07657.1| splicing factor, arginine/serine-rich 4, isoform CRA_a [Homo
sapiens]
Length = 484
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 83/139 (59%), Gaps = 5/139 (3%)
Query: 38 LKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYS 97
L++ P Y F+EF+D RDA+DA+ +G + G R+ VE A G RR S S Y
Sbjct: 18 LEVLHPAPRYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSYGSGRSGYG 77
Query: 98 ---SGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVD 153
SG + G R++YR++V L S SWQDLKD+MR+AG+V ++ + R G+++
Sbjct: 78 YRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKN-EGVIE 136
Query: 154 YTSYDDMKYAIRKLDRSEF 172
+ SY DMK A+ KLD +E
Sbjct: 137 FVSYSDMKRALEKLDGTEV 155
>gi|351708666|gb|EHB11585.1| Splicing factor, arginine/serine-rich 5 [Heterocephalus glaber]
Length = 270
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 92/170 (54%), Gaps = 12/170 (7%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EFED RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSAS 122
R+ +E A R RYS +SS R R R++ R++V L S S
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRSAPPVRTENRLIVENLSSRVS 120
Query: 123 WQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
WQDLKD MR+AG+V F+ R + G+V++ SY D+K AI KL E
Sbjct: 121 WQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYGDLKNAIEKLSGKEI 169
>gi|432107111|gb|ELK32534.1| Serine/arginine-rich splicing factor 5 [Myotis davidii]
Length = 280
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 92/170 (54%), Gaps = 12/170 (7%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EFED RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSAS 122
R+ +E A R RYS +SS R R R++ R++V L S S
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVS 120
Query: 123 WQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
WQDLKD MR+AG+V F+ R + G+V++ SY D+K AI KL E
Sbjct: 121 WQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYGDLKNAIEKLSGKEI 169
>gi|402876562|ref|XP_003902030.1| PREDICTED: serine/arginine-rich splicing factor 5 [Papio anubis]
Length = 272
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 92/170 (54%), Gaps = 12/170 (7%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EFED RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSAS 122
R+ +E A R RYS +SS R R R++ R++V L S S
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVS 120
Query: 123 WQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
WQDLKD MR+AG+V F+ R + G+V++ SY D+K AI KL E
Sbjct: 121 WQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYGDLKNAIEKLSGKEI 169
>gi|348573304|ref|XP_003472431.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Cavia
porcellus]
Length = 273
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 92/170 (54%), Gaps = 12/170 (7%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EFED RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSAS 122
R+ +E A R RYS +SS R R R++ R++V L S S
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVS 120
Query: 123 WQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
WQDLKD MR+AG+V F+ R + G+V++ SY D+K AI KL E
Sbjct: 121 WQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYGDLKNAIEKLSGKEI 169
>gi|291410875|ref|XP_002721708.1| PREDICTED: splicing factor, arginine/serine-rich 5 [Oryctolagus
cuniculus]
Length = 275
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 92/170 (54%), Gaps = 12/170 (7%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EFED RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSAS 122
R+ +E A R RYS +SS R R R++ R++V L S S
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVS 120
Query: 123 WQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
WQDLKD MR+AG+V F+ R + G+V++ SY D+K AI KL E
Sbjct: 121 WQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYGDLKNAIEKLSGKEI 169
>gi|307133730|ref|NP_001182521.1| splicing factor, arginine/serine-rich 5 [Pongo abelii]
gi|109084084|ref|XP_001109903.1| PREDICTED: splicing factor, arginine/serine-rich 5 isoform 2
[Macaca mulatta]
gi|297298154|ref|XP_001110094.2| PREDICTED: splicing factor, arginine/serine-rich 5 isoform 3
[Macaca mulatta]
gi|297298156|ref|XP_001110146.2| PREDICTED: splicing factor, arginine/serine-rich 5 isoform 4
[Macaca mulatta]
gi|119601409|gb|EAW81003.1| splicing factor, arginine/serine-rich 5, isoform CRA_b [Homo
sapiens]
Length = 271
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 92/170 (54%), Gaps = 12/170 (7%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EFED RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSAS 122
R+ +E A R RYS +SS R R R++ R++V L S S
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVS 120
Query: 123 WQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
WQDLKD MR+AG+V F+ R + G+V++ SY D+K AI KL E
Sbjct: 121 WQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYGDLKNAIEKLSGKEI 169
>gi|149643059|ref|NP_001092399.1| serine/arginine-rich splicing factor 5 [Bos taurus]
gi|73963391|ref|XP_867135.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 9 [Canis
lupus familiaris]
gi|301763317|ref|XP_002917076.1| PREDICTED: splicing factor, arginine/serine-rich 5-like [Ailuropoda
melanoleuca]
gi|345803610|ref|XP_867196.2| PREDICTED: serine/arginine-rich splicing factor 5 isoform 15 [Canis
lupus familiaris]
gi|410962543|ref|XP_003987828.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1 [Felis
catus]
gi|410962545|ref|XP_003987829.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2 [Felis
catus]
gi|410962547|ref|XP_003987830.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 3 [Felis
catus]
gi|148878097|gb|AAI46186.1| SFRS5 protein [Bos taurus]
gi|281349392|gb|EFB24976.1| hypothetical protein PANDA_005250 [Ailuropoda melanoleuca]
gi|296482956|tpg|DAA25071.1| TPA: splicing factor, arginine/serine-rich 5 [Bos taurus]
gi|440897364|gb|ELR49075.1| Serine/arginine-rich splicing factor 5 [Bos grunniens mutus]
Length = 272
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 92/170 (54%), Gaps = 12/170 (7%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EFED RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSAS 122
R+ +E A R RYS +SS R R R++ R++V L S S
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVS 120
Query: 123 WQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
WQDLKD MR+AG+V F+ R + G+V++ SY D+K AI KL E
Sbjct: 121 WQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYGDLKNAIEKLSGKEI 169
>gi|86991438|ref|NP_001034554.1| serine/arginine-rich splicing factor 5 [Homo sapiens]
gi|86991440|ref|NP_008856.2| serine/arginine-rich splicing factor 5 [Homo sapiens]
gi|296215383|ref|XP_002754098.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2
[Callithrix jacchus]
gi|332229001|ref|XP_003263676.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1
[Nomascus leucogenys]
gi|332229003|ref|XP_003263677.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2
[Nomascus leucogenys]
gi|332842591|ref|XP_510034.2| PREDICTED: serine/arginine-rich splicing factor 5 isoform 6 [Pan
troglodytes]
gi|332842593|ref|XP_001143701.2| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2 [Pan
troglodytes]
gi|390469250|ref|XP_002754097.2| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1
[Callithrix jacchus]
gi|397507326|ref|XP_003824150.1| PREDICTED: serine/arginine-rich splicing factor 5 [Pan paniscus]
gi|403264529|ref|XP_003924530.1| PREDICTED: serine/arginine-rich splicing factor 5 [Saimiri
boliviensis boliviensis]
gi|426377318|ref|XP_004055414.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1
[Gorilla gorilla gorilla]
gi|426377320|ref|XP_004055415.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2
[Gorilla gorilla gorilla]
gi|3929378|sp|Q13243.1|SRSF5_HUMAN RecName: Full=Serine/arginine-rich splicing factor 5; AltName:
Full=Delayed-early protein HRS; AltName:
Full=Pre-mRNA-splicing factor SRP40; AltName:
Full=Splicing factor, arginine/serine-rich 5
gi|1049080|gb|AAA93070.1| SRp40-1 [Homo sapiens]
gi|17511888|gb|AAH18823.1| Splicing factor, arginine/serine-rich 5 [Homo sapiens]
gi|30583017|gb|AAP35752.1| splicing factor, arginine/serine-rich 5 [Homo sapiens]
gi|61362109|gb|AAX42162.1| splicing factor arginine/serine-rich 5 [synthetic construct]
gi|61362114|gb|AAX42163.1| splicing factor arginine/serine-rich 5 [synthetic construct]
gi|71297198|gb|AAH40209.1| Splicing factor, arginine/serine-rich 5 [Homo sapiens]
gi|90075796|dbj|BAE87578.1| unnamed protein product [Macaca fascicularis]
gi|119601408|gb|EAW81002.1| splicing factor, arginine/serine-rich 5, isoform CRA_a [Homo
sapiens]
gi|119601411|gb|EAW81005.1| splicing factor, arginine/serine-rich 5, isoform CRA_a [Homo
sapiens]
gi|119601412|gb|EAW81006.1| splicing factor, arginine/serine-rich 5, isoform CRA_a [Homo
sapiens]
gi|208967490|dbj|BAG73759.1| splicing factor, arginine/serine-rich 5 [synthetic construct]
gi|355693393|gb|EHH27996.1| hypothetical protein EGK_18328 [Macaca mulatta]
gi|355778697|gb|EHH63733.1| hypothetical protein EGM_16760 [Macaca fascicularis]
gi|380815560|gb|AFE79654.1| serine/arginine-rich splicing factor 5 [Macaca mulatta]
gi|380815562|gb|AFE79655.1| serine/arginine-rich splicing factor 5 [Macaca mulatta]
gi|380815564|gb|AFE79656.1| serine/arginine-rich splicing factor 5 [Macaca mulatta]
gi|383420727|gb|AFH33577.1| serine/arginine-rich splicing factor 5 [Macaca mulatta]
gi|383420729|gb|AFH33578.1| serine/arginine-rich splicing factor 5 [Macaca mulatta]
gi|383420731|gb|AFH33579.1| serine/arginine-rich splicing factor 5 [Macaca mulatta]
gi|410218428|gb|JAA06433.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410218430|gb|JAA06434.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410252412|gb|JAA14173.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410252414|gb|JAA14174.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410303912|gb|JAA30556.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410303914|gb|JAA30557.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410357772|gb|JAA44585.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410357774|gb|JAA44586.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410358000|gb|JAA44587.1| splicing factor, arginine/serine-rich 5 [Pan troglodytes]
Length = 272
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 92/170 (54%), Gaps = 12/170 (7%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EFED RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSAS 122
R+ +E A R RYS +SS R R R++ R++V L S S
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVS 120
Query: 123 WQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
WQDLKD MR+AG+V F+ R + G+V++ SY D+K AI KL E
Sbjct: 121 WQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYGDLKNAIEKLSGKEI 169
>gi|119226243|ref|NP_001073162.1| serine/arginine-rich splicing factor 5 [Mus musculus]
gi|119226245|ref|NP_033185.2| serine/arginine-rich splicing factor 5 [Mus musculus]
gi|119226247|ref|NP_001073163.1| serine/arginine-rich splicing factor 5 [Mus musculus]
gi|158631248|ref|NP_062130.2| serine/arginine-rich splicing factor 5 [Rattus norvegicus]
gi|306774128|ref|NP_001182434.1| serine/arginine-rich splicing factor 5 [Rattus norvegicus]
gi|306774130|ref|NP_001182435.1| serine/arginine-rich splicing factor 5 [Rattus norvegicus]
gi|354472150|ref|XP_003498303.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Cricetulus
griseus]
gi|1168968|sp|Q09167.1|SRSF5_RAT RecName: Full=Serine/arginine-rich splicing factor 5; AltName:
Full=Delayed-early protein HRS; AltName:
Full=Insulin-induced growth response protein CL-4;
AltName: Full=Pre-mRNA-splicing factor SRP40; AltName:
Full=Splicing factor, arginine/serine-rich 5
gi|410516929|sp|O35326.2|SRSF5_MOUSE RecName: Full=Serine/arginine-rich splicing factor 5; AltName:
Full=Delayed-early protein HRS; AltName:
Full=Pre-mRNA-splicing factor SRP40; AltName:
Full=Splicing factor, arginine/serine-rich 5
gi|349079|gb|AAA62266.1| growth response protein [Rattus norvegicus]
gi|34849628|gb|AAH58479.1| Sfrs5 protein [Rattus norvegicus]
gi|52139013|gb|AAH82593.1| Splicing factor, arginine/serine-rich 5 (SRp40, HRS) [Mus musculus]
gi|74144656|dbj|BAE27313.1| unnamed protein product [Mus musculus]
gi|148670738|gb|EDL02685.1| mCG7614, isoform CRA_a [Mus musculus]
gi|148670740|gb|EDL02687.1| mCG7614, isoform CRA_a [Mus musculus]
gi|148670743|gb|EDL02690.1| mCG7614, isoform CRA_a [Mus musculus]
gi|148670745|gb|EDL02692.1| mCG7614, isoform CRA_a [Mus musculus]
gi|148670746|gb|EDL02693.1| mCG7614, isoform CRA_a [Mus musculus]
gi|149025034|gb|EDL81401.1| splicing factor, arginine/serine-rich 5, isoform CRA_b [Rattus
norvegicus]
gi|149025037|gb|EDL81404.1| splicing factor, arginine/serine-rich 5, isoform CRA_b [Rattus
norvegicus]
gi|344235744|gb|EGV91847.1| Splicing factor, arginine/serine-rich 5 [Cricetulus griseus]
Length = 269
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 92/170 (54%), Gaps = 12/170 (7%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EFED RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSAS 122
R+ +E A R RYS +SS R R R++ R++V L S S
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVS 120
Query: 123 WQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
WQDLKD MR+AG+V F+ R + G+V++ SY D+K AI KL E
Sbjct: 121 WQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYGDLKNAIEKLSGKEI 169
>gi|335292735|ref|XP_001927454.2| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1 [Sus
scrofa]
gi|335292737|ref|XP_001927469.2| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2 [Sus
scrofa]
Length = 272
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 92/170 (54%), Gaps = 12/170 (7%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EFED RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSAS 122
R+ +E A R RYS +SS R R R++ R++V L S S
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVS 120
Query: 123 WQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
WQDLKD MR+AG+V F+ R + G+V++ SY D+K AI KL E
Sbjct: 121 WQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYGDLKNAIEKLSGKEI 169
>gi|12841460|dbj|BAB25217.1| unnamed protein product [Mus musculus]
gi|148670741|gb|EDL02688.1| mCG7614, isoform CRA_c [Mus musculus]
gi|148670742|gb|EDL02689.1| mCG7614, isoform CRA_c [Mus musculus]
gi|148670747|gb|EDL02694.1| mCG7614, isoform CRA_c [Mus musculus]
Length = 270
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 92/170 (54%), Gaps = 12/170 (7%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EFED RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSAS 122
R+ +E A R RYS +SS R R R++ R++V L S S
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVS 120
Query: 123 WQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
WQDLKD MR+AG+V F+ R + G+V++ SY D+K AI KL E
Sbjct: 121 WQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYGDLKNAIEKLSGKEI 169
>gi|307133720|ref|NP_001182516.1| splicing factor, arginine/serine-rich 5 [Equus caballus]
Length = 271
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 92/170 (54%), Gaps = 12/170 (7%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EFED RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSAS 122
R+ +E A R RYS +SS R R R++ R++V L S S
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVS 120
Query: 123 WQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
WQDLKD MR+AG+V F+ R + G+V++ SY D+K AI KL E
Sbjct: 121 WQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYGDLKNAIEKLSGKEI 169
>gi|30583835|gb|AAP36166.1| Homo sapiens splicing factor, arginine/serine-rich 5 [synthetic
construct]
gi|60653861|gb|AAX29623.1| splicing factor arginine/serine-rich 5 [synthetic construct]
Length = 273
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 92/170 (54%), Gaps = 12/170 (7%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EFED RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSAS 122
R+ +E A R RYS +SS R R R++ R++V L S S
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVS 120
Query: 123 WQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
WQDLKD MR+AG+V F+ R + G+V++ SY D+K AI KL E
Sbjct: 121 WQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYGDLKNAIEKLSGKEI 169
>gi|46134285|ref|XP_389458.1| hypothetical protein FG09282.1 [Gibberella zeae PH-1]
Length = 330
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 109/216 (50%), Gaps = 17/216 (7%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGP--IVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ S+ LY+GNLP + +VE F +G I ++ L G+ F+E++D DA
Sbjct: 1 MTEVSATRLYLGNLPRNATKTDVEAHFATHGTGEITEVKLM-----NGFGFIEYKDPMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLP 118
D + G +F G RL V+ A G R + ++ R RR+ +R+ +TGLP
Sbjct: 56 RDVVPAFHGSDFMGERLTVQFARGSRHREGG--NFGNHERTAPR--PRRTPHRMQITGLP 111
Query: 119 SSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF---RN 174
+ SWQDLKD R++ DV +S+ RD G G V++ + D++ A+ KLD EF R
Sbjct: 112 NDTSWQDLKDFARQSSLDVVYSETGRDSNGR-GFVEFETAADLRTAVEKLDGREFKGQRV 170
Query: 175 AFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSP 210
SR+ + V D R +P+ P+ + P
Sbjct: 171 QLSRTCLPVSVAD-RALLDDAPTLLPWTITTAVALP 205
>gi|384498124|gb|EIE88615.1| hypothetical protein RO3G_13326 [Rhizopus delemar RA 99-880]
Length = 429
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 87/168 (51%), Gaps = 37/168 (22%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M S +Y+GNLP + E+E +F Y P V++ LK + F+EF++ DA+D
Sbjct: 180 MGSSDGNRVYLGNLPVNVSKSEIESVFKNYNP-VEVTLK-----ERFGFVEFDNKVDADD 233
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
AI D + + SG SR RS YRV++ LP
Sbjct: 234 AIH---------------------------DLHGTKVSGSSR--EERS-YRVVIKNLPPR 263
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLD 168
+WQD+KD MR+AG V F+ V +D G G+V++ YDDMKYA+R+LD
Sbjct: 264 TTWQDVKDFMRKAGRVVFADVLKDCDG-EGVVEFAQYDDMKYALRELD 310
>gi|225712990|gb|ACO12341.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
gi|290462763|gb|ADD24429.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
gi|290562097|gb|ADD38445.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
Length = 250
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 90/181 (49%), Gaps = 23/181 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP + R R+VE LF +YG I ++ +K GY F+EF+D RDA+D + DG
Sbjct: 7 VYVGNLPENVRERDVEKLFKEYGRIREVVIK-----SGYGFVEFDDPRDADDVVNDMDGK 61
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSR-----------------RSDYR 111
F G R+RVE+A R GG G R++YR
Sbjct: 62 EFQGGRVRVEMARDPRERRGRDRDRGYERRGGGGGGYDRRDTRGDRGRRGNPPGPRTNYR 121
Query: 112 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSE 171
+ V L S SWQDLKD+ R AG++ ++ R G G+V++ S + YAI D E
Sbjct: 122 ITVQNLSSRTSWQDLKDYFRAAGEITYTNAHTPRQG-EGVVEFASSRGLDYAIDHQDELE 180
Query: 172 F 172
Sbjct: 181 L 181
>gi|47221305|emb|CAG13241.1| unnamed protein product [Tetraodon nigroviridis]
Length = 315
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 90/175 (51%), Gaps = 17/175 (9%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G+L R R+VE F YG I +I+LK G+ F+EF+D+RDA+DA+ +G
Sbjct: 6 VFIGHLSPHARERDVEKFFKGYGRIREINLK-----NGFGFVEFDDHRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELA-----------HGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGL 117
R+ +E A G S SSG G R+++R++V L
Sbjct: 61 ELCSERVTIEHARSRRGRGGGPGMGRFGGGGGGGYRPSRSSGPRYGPPVRTEHRLIVENL 120
Query: 118 PSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
S SWQDLKD MR+AG+V F R G+V++ S DMK AI K D +E
Sbjct: 121 SSRISWQDLKDMMRKAGEVTFVDAHRPNKN-EGVVEFASRSDMKSAISKFDGTEL 174
>gi|395522106|ref|XP_003765081.1| PREDICTED: serine/arginine-rich splicing factor 4 [Sarcophilus
harrisii]
Length = 338
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 80/131 (61%), Gaps = 5/131 (3%)
Query: 46 GYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR 102
GY F+EF+D RDA+DA+ +G + G R+ VE A G RR S S Y SG +
Sbjct: 31 GYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDK 90
Query: 103 -GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMK 161
G R++YR++V L S SWQDLKD+MR+AG+V ++ + R G++++ SY DMK
Sbjct: 91 YGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMK 149
Query: 162 YAIRKLDRSEF 172
A+ KLD +E
Sbjct: 150 RALEKLDGTEV 160
>gi|451847680|gb|EMD60987.1| hypothetical protein COCSADRAFT_163394 [Cochliobolus sativus
ND90Pr]
Length = 340
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 96/176 (54%), Gaps = 14/176 (7%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP + +VE F +G I +I L G+ F+E++D DA
Sbjct: 1 MTEVSSTRLYLGNLPRNATKADVEGHFQTHGTGEITEIKLMN-----GFGFIEYKDAMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLP 118
D + G +F G RL V+ A G R + + + RR+ YR+ + LP
Sbjct: 56 RDVVPAFHGSDFMGERLIVQFARGSRARNENFTPHERVPP-----RPRRTPYRMRIANLP 110
Query: 119 SSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
SWQDLKD R++G DV +S+V R+R G TG V+Y + D+K A+ KLDR EF+
Sbjct: 111 VETSWQDLKDFARQSGLDVVYSEVGRERDG-TGFVEYETAADLKTAVEKLDRREFK 165
>gi|395849594|ref|XP_003797407.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1
[Otolemur garnettii]
gi|395849596|ref|XP_003797408.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2
[Otolemur garnettii]
Length = 270
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 92/170 (54%), Gaps = 12/170 (7%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EFED RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSAS 122
R+ +E A R RYS +SS R R R++ R++V L S S
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVS 120
Query: 123 WQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
WQDLKD MR+AG+V F+ R + G+V++ SY D+K AI KL E
Sbjct: 121 WQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYGDLKNAIEKLSGKEI 169
>gi|330941512|ref|XP_003306066.1| hypothetical protein PTT_19086 [Pyrenophora teres f. teres 0-1]
gi|311316625|gb|EFQ85835.1| hypothetical protein PTT_19086 [Pyrenophora teres f. teres 0-1]
Length = 342
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 96/176 (54%), Gaps = 14/176 (7%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP + +VE F +G I +I L G+ F+E++D DA
Sbjct: 1 MTEVSSTRLYLGNLPRNATKADVEGHFQTHGTGEITEIKLMN-----GFGFIEYKDAMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLP 118
D + G +F G RL V+ A G R + + + RR+ YR+ + LP
Sbjct: 56 RDVVPAFHGSDFMGERLIVQFARGSRARNENFTPHERVPP-----RPRRTPYRMRIANLP 110
Query: 119 SSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
SWQDLKD R++G DV +S+V R+R G TG V+Y + D+K A+ KLDR EF+
Sbjct: 111 VETSWQDLKDFARQSGLDVVYSEVGRERDG-TGFVEYETAADLKAAVEKLDRREFK 165
>gi|119601416|gb|EAW81010.1| splicing factor, arginine/serine-rich 5, isoform CRA_e [Homo
sapiens]
Length = 209
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 92/170 (54%), Gaps = 12/170 (7%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EFED RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSAS 122
R+ +E A R RYS +SS R R R++ R++V L S S
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVS 120
Query: 123 WQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
WQDLKD MR+AG+V F+ R + G+V++ SY D+K AI KL E
Sbjct: 121 WQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYGDLKNAIEKLSGKEI 169
>gi|335307313|ref|XP_003360793.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Sus scrofa]
Length = 221
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 92/170 (54%), Gaps = 12/170 (7%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EFED RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSAS 122
R+ +E A R RYS +SS R R R++ R++V L S S
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVS 120
Query: 123 WQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
WQDLKD MR+AG+V F+ R + G+V++ SY D+K AI KL E
Sbjct: 121 WQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYGDLKNAIEKLSGKEI 169
>gi|327281934|ref|XP_003225700.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Anolis
carolinensis]
Length = 266
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 92/176 (52%), Gaps = 23/176 (13%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EFED RDA+DA+ Y
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAV-----Y 55
Query: 69 NFDGYRL---RVELAHGGRRHSSSM-------DRYSSYSSGGSRGVS--RRSDYRVLVTG 116
DG L RV + H R DR+SS R + R++ R++V
Sbjct: 56 ELDGKELCSERVTIEHARARSRGGRGRGGRYSDRFSSRRPRNDRRNAPPVRTENRLIVEN 115
Query: 117 LPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
L S SWQDLKD MR+AG+V F+ R + G+V++ SY D+K AI KL E
Sbjct: 116 LSSRVSWQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYSDLKNAIEKLSGKEI 170
>gi|408390763|gb|EKJ70150.1| hypothetical protein FPSE_09676 [Fusarium pseudograminearum CS3096]
Length = 312
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 95/176 (53%), Gaps = 13/176 (7%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ S+ LY+GNLP + +VE F +G I ++ L G+ F+E++D DA
Sbjct: 1 MTEVSATRLYLGNLPRNATKTDVEAHFATHGTGEITEVKLMN-----GFGFIEYKDPMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLP 118
D + G +F G RL V+ A G R + ++ R RR+ +R+ +TGLP
Sbjct: 56 RDVVPAFHGSDFMGERLTVQFARGSRHREGG--NFGNHERTAPR--PRRTPHRMQITGLP 111
Query: 119 SSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
+ SWQDLKD R++ DV +S+ RD G G V++ + D++ A+ KLD EF+
Sbjct: 112 NDTSWQDLKDFARQSSLDVVYSETGRDSNGR-GFVEFETAADLRTAVEKLDGREFK 166
>gi|340516476|gb|EGR46724.1| predicted protein [Trichoderma reesei QM6a]
Length = 311
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/243 (34%), Positives = 121/243 (49%), Gaps = 33/243 (13%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP +VE F +G I ++ L G+ F+E++D DA
Sbjct: 1 MTEVSSTRLYLGNLPRHATKSDVEAHFATHGTGEITEVKLMN-----GFGFIEYKDAMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLP 118
D + G +F G RL V+ A G R M + RR+ +R+ +TGLP
Sbjct: 56 RDVVPAFHGSDFMGERLTVQFARGTRHREGGMGHERAPPR------PRRTPHRMQITGLP 109
Query: 119 SSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFS 177
+ SWQDLKD R++ DV +S+ RD G G V++ + D++ AI KLD EF+ +
Sbjct: 110 NDTSWQDLKDFARQSSLDVVYSETGRDSNG-RGFVEFETAADLRTAIEKLDGREFKGSRV 168
Query: 178 RSYVRVR-EYDSR-RSYSRSPSRSPY-------YSR--------SRSRSPYYS-RSRSPS 219
+ V ++ + R R+ SRSP R PY Y R SR P YS R RSP
Sbjct: 169 QCIVDLQPDMPPRDRARSRSPGRRPYPPPAFDNYDRRGGPHRGYSREAPPAYSYRDRSPR 228
Query: 220 RSW 222
R +
Sbjct: 229 REY 231
>gi|170087376|ref|XP_001874911.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650111|gb|EDR14352.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 297
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 89/171 (52%), Gaps = 12/171 (7%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
SR LY+G LP D R +V F YG I+D + G+ F+EFE+ +DAEDA+
Sbjct: 2 SRRLYLGRLPTDARSDDVSKFFDGYGRIIDCRVMT-----GFGFVEFENAKDAEDAVHNF 56
Query: 66 DGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRR---SDYRVLVTGLPSSAS 122
+G F G + VE A R Y + GG G R R++V+G+ S
Sbjct: 57 NGKPFMGVNIVVEFAKESRPRREV---YDNDRGGGGHGAPRSRRPPGIRLIVSGVSRDTS 113
Query: 123 WQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
WQDLKD R AG V F+ + RD G G+++Y S +D A+++LD + R
Sbjct: 114 WQDLKDFGRDAGSVSFADIDRDVPGQ-GVLEYLSREDADRAVKELDGKDLR 163
>gi|449488807|ref|XP_002189002.2| PREDICTED: serine/arginine-rich splicing factor 4 [Taeniopygia
guttata]
Length = 446
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 81/134 (60%), Gaps = 13/134 (9%)
Query: 47 YAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSG-GSRGVS 105
Y F+EF+D RDA+DA+ +G + G R+ VE A G RR SS Y S SG G R
Sbjct: 6 YGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDSS----YGSGRSGYGYRRSG 61
Query: 106 R-------RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYD 158
R R++YR++V L S SWQDLKD+MR+AG+V ++ + R G++++ SY
Sbjct: 62 RDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKN-EGVIEFKSYS 120
Query: 159 DMKYAIRKLDRSEF 172
DMK A+ KLD +E
Sbjct: 121 DMKRALEKLDGTEV 134
>gi|50540286|ref|NP_001002610.1| splicing factor, arginine/serine-rich 5 [Danio rerio]
gi|49900455|gb|AAH75982.1| Splicing factor, arginine/serine-rich 5b [Danio rerio]
Length = 285
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 87/172 (50%), Gaps = 14/172 (8%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EF+D RDAEDA+ DG
Sbjct: 6 IFIGRLNPSAREKDVERFFKGYGRIRDIDLKR-----GFGFVEFDDPRDAEDAVYELDGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVS--------RRSDYRVLVTGLPSS 120
R+ +E A R + + RG R++ R++V L S
Sbjct: 61 ELCNERVTIEHARVRLRGGRGRGGGGRFPARYGRGSQDSRRNPPPMRTENRLIVENLSSR 120
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
SWQDLKD MR+AG+V F+ R G+V++ S+ D+K A+ KL E
Sbjct: 121 VSWQDLKDFMRQAGEVTFADAHRPNLN-EGVVEFASHSDLKNALEKLSGKEI 171
>gi|2435503|gb|AAC39946.1| HRS [Mus musculus]
Length = 270
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 88/165 (53%), Gaps = 12/165 (7%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EFED RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRR------SDYRVLVTGLPSSAS 122
R+ +E A R RYS + G RR + R++V L S S
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRLAVADLGNDRRKCSTCKNRNRLIVENLSSRVS 120
Query: 123 WQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKL 167
WQDLKD MR+AG+V F+ R + G+V++ SY D+K AI KL
Sbjct: 121 WQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYGDLKNAIEKL 164
>gi|171849000|pdb|3BEG|B Chain B, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 115
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 62/81 (76%), Gaps = 4/81 (4%)
Query: 105 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 164
SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD TG+V++ +DM YA+
Sbjct: 12 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRD---GTGVVEFVRKEDMTYAV 68
Query: 165 RKLDRSEFR-NAFSRSYVRVR 184
RKLD ++FR + +Y+RV+
Sbjct: 69 RKLDNTKFRSHEGETAYIRVK 89
>gi|336367304|gb|EGN95649.1| hypothetical protein SERLA73DRAFT_186792 [Serpula lacrymans var.
lacrymans S7.3]
gi|336380022|gb|EGO21176.1| hypothetical protein SERLADRAFT_441550 [Serpula lacrymans var.
lacrymans S7.9]
Length = 324
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 91/186 (48%), Gaps = 25/186 (13%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDI-------DLKIPPRP------PGYAFLEF 52
+R LY+G LP D R +V F YG IVD D + P G+ F+EF
Sbjct: 2 ARRLYLGRLPPDARSDDVAKFFDGYGRIVDCRVMTGSSDKRRSANPGLTAPSSGFGFVEF 61
Query: 53 EDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVS-----RR 107
E+ +DAEDA+ +G F G + VE A S R Y GG RG R
Sbjct: 62 ENSKDAEDAVHHFNGKPFMGVNIVVEFA------KESRPRRDVYEGGGERGFGSARSRRP 115
Query: 108 SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKL 167
R++V+G+ SWQDLKD R AG V F+ + RD G GI++Y S DD A++ L
Sbjct: 116 PGIRLIVSGISRDTSWQDLKDFGREAGSVSFADIDRDFPGQ-GILEYLSRDDADRAVKDL 174
Query: 168 DRSEFR 173
D + R
Sbjct: 175 DGKDLR 180
>gi|308482317|ref|XP_003103362.1| hypothetical protein CRE_27700 [Caenorhabditis remanei]
gi|308260152|gb|EFP04105.1| hypothetical protein CRE_27700 [Caenorhabditis remanei]
Length = 201
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 81/173 (46%), Gaps = 58/173 (33%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M +R +YVGNLP D R +E+ DLFYKYG + IDLK R P +AF+EF D+R+
Sbjct: 1 MVTRDETQIYVGNLPNDVRTKEIGDLFYKYGRVRYIDLK-TCRGPSFAFVEFSDHRN--- 56
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
G R+ ++R+ VT LP
Sbjct: 57 ------------------------------------------GPQRKFNFRIRVTNLPRP 74
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
W DLKD+M+ D+ F GIV++TSY D+KYAIRK D +FR
Sbjct: 75 TRWHDLKDYMQSIKDIVF-----------GIVEFTSY-DVKYAIRKFDGRKFR 115
>gi|328849877|gb|EGF99050.1| hypothetical protein MELLADRAFT_79554 [Melampsora larici-populina
98AG31]
Length = 259
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 102/191 (53%), Gaps = 8/191 (4%)
Query: 7 RTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRD 66
R LY+G +P + ++E F +YG ++D+ + G+ FLE++ RDAEDA+ +
Sbjct: 6 RRLYIGRIPQEATRTDIEKYFGRYGTLLDVRIM-----AGFGFLEYDQVRDAEDAVHDLN 60
Query: 67 GYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDL 126
G F G RL VE A R S GG RRS +R++V G+ SWQDL
Sbjct: 61 GREFMGDRLIVEFAKAPRGGREMYGGGGGGSYGGGG-GPRRSGFRLIVKGISHETSWQDL 119
Query: 127 KDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREY 186
KD R+AG+V + V R+ G G+++Y+S DD A+RKLD ++ + + R
Sbjct: 120 KDFARQAGNVIRADVDRNMPG-EGLIEYSSQDDADNALRKLDGTDLKGMVV-TLFEDRPG 177
Query: 187 DSRRSYSRSPS 197
RR SRSPS
Sbjct: 178 GGRRDRSRSPS 188
>gi|159163317|pdb|1WG4|A Chain A, Solution Structure Of Rrm Domain In Protein Bab31986
Length = 98
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 63/80 (78%), Gaps = 4/80 (5%)
Query: 105 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 164
+RRSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D GM G+V+Y +DM+YA+
Sbjct: 11 TRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKD--GM-GMVEYLRKEDMEYAL 67
Query: 165 RKLDRSEFR-NAFSRSYVRV 183
RKLD ++FR + SY+RV
Sbjct: 68 RKLDDTKFRSHEGETSYIRV 87
>gi|22268151|gb|AAH26944.1| Sfrs4 protein [Mus musculus]
Length = 489
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 79/130 (60%), Gaps = 5/130 (3%)
Query: 47 YAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR- 102
Y F+EF+D RDA+DA+ +G + G R+ VE A G RR S S Y SG +
Sbjct: 37 YGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKY 96
Query: 103 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 162
G R++YR++V L S SWQDLKD+MR+AG+V ++ + R G++++ SY DMK
Sbjct: 97 GPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKR 155
Query: 163 AIRKLDRSEF 172
A+ KLD +E
Sbjct: 156 ALEKLDGTEV 165
>gi|148669916|gb|EDL01863.1| splicing factor, arginine/serine-rich 1 (ASF/SF2), isoform CRA_a
[Mus musculus]
gi|149053806|gb|EDM05623.1| rCG34610, isoform CRA_b [Rattus norvegicus]
Length = 168
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/71 (66%), Positives = 57/71 (80%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++ED+FYKYG I DIDLK P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGYRLRVEL 79
++DGYRLRVE
Sbjct: 78 DYDGYRLRVEF 88
>gi|403418011|emb|CCM04711.1| predicted protein [Fibroporia radiculosa]
Length = 328
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 89/168 (52%), Gaps = 12/168 (7%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
+R LY+G LP D R +V F YG IVD + G+ F+EFE RDA+DA+R
Sbjct: 2 ARRLYLGRLPPDARSEDVSKFFDGYGRIVDCRVMT-----GFGFVEFESSRDADDAVRDF 56
Query: 66 DGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQD 125
+G F G + VE A S R + + R +R++V+G+ SWQD
Sbjct: 57 NGKAFMGANIVVEFAK------ESRPRREVFEPERAPRARRPPGFRLVVSGISRDTSWQD 110
Query: 126 LKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
LKD R AG V ++ + RD G GI++Y S DD + A+++LD + R
Sbjct: 111 LKDFGREAGSVSYADIDRDAAG-EGILEYLSRDDAERAVKELDGKDLR 157
>gi|189211717|ref|XP_001942187.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187979386|gb|EDU46012.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 340
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 97/176 (55%), Gaps = 16/176 (9%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP + +VE F +G I +I L G+ F+E++D DA
Sbjct: 1 MTEVSSTRLYLGNLPRNATKADVEGHFQTHGTGEITEIKLMN-----GFGFIEYKDAMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLP 118
D + DG +F G RL V+ A G R + + + RR+ YR+ + LP
Sbjct: 56 RDVVP--DGSDFMGERLIVQFARGSRARNENFTPHERVPP-----RPRRTPYRMRIANLP 108
Query: 119 SSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
SWQDLKD R++G DV +S+V R+R G TG V+Y + D+K A+ KLDR EF+
Sbjct: 109 VETSWQDLKDFARQSGLDVVYSEVGRERDG-TGFVEYETAADLKAAVEKLDRREFK 163
>gi|451996756|gb|EMD89222.1| hypothetical protein COCHEDRAFT_1158038 [Cochliobolus
heterostrophus C5]
Length = 338
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 97/176 (55%), Gaps = 16/176 (9%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP + +VE F +G I +I L G+ F+E++D DA
Sbjct: 1 MTEVSSTRLYLGNLPRNATKADVEGHFQTHGTGEITEIKLMN-----GFGFIEYKDAMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLP 118
D + DG +F G RL V+ A G R + + + RR+ YR+ + LP
Sbjct: 56 RDVVP--DGSDFMGERLIVQFARGSRARNENFTPHERVPP-----RPRRTPYRMRIANLP 108
Query: 119 SSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
SWQDLKD R++G DV +S+V R+R G TG V+Y + D+K A+ KLDR EF+
Sbjct: 109 VETSWQDLKDFARQSGLDVVYSEVGRERDG-TGFVEYETAADLKTAVEKLDRREFK 163
>gi|158429186|pdb|2O3D|A Chain A, Structure Of Human Sf2ASF RNA RECOGNITION MOTIF 2 (RRM2)
Length = 113
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 62/81 (76%), Gaps = 4/81 (4%)
Query: 105 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 164
SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD TG+V++ +DM YA+
Sbjct: 11 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAV 67
Query: 165 RKLDRSEFR-NAFSRSYVRVR 184
RKLD ++FR + +Y+RV+
Sbjct: 68 RKLDNTKFRSHEGETAYIRVK 88
>gi|146323402|ref|XP_754610.2| pre-RNA splicing factor Srp2 [Aspergillus fumigatus Af293]
gi|129558308|gb|EAL92572.2| pre-RNA splicing factor Srp2, putative [Aspergillus fumigatus
Af293]
gi|159127623|gb|EDP52738.1| pre-RNA splicing factor Srp2, putative [Aspergillus fumigatus
A1163]
Length = 272
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/214 (36%), Positives = 110/214 (51%), Gaps = 28/214 (13%)
Query: 31 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 90
G I +I L G+ F+E+ED DA D + DG +F G RL V+ A G RR +
Sbjct: 8 GKITEIKLMN-----GFGFIEYEDAMDARDVVP--DGSDFKGERLTVQFARGPRRKEN-- 58
Query: 91 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMT 149
+ + RR+ +R+LV+GLP + SWQDLKD R++G DV +S+ R++G
Sbjct: 59 --FPGPPDRPNMPRPRRTIFRMLVSGLPET-SWQDLKDFARQSGLDVVYSETGREQG--R 113
Query: 150 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRS 209
G V++ + D+K AI KLD EF+ + ++ +D R R PY RSRS
Sbjct: 114 GFVEFETAADLKTAIDKLDGREFKGSRVSCVADIQPHDDRI------FRDPY----RSRS 163
Query: 210 PYYSRSRSPSRSWSYS-PRSRSYSPRGKYSRRSP 242
P RS P + P R YSPR Y RSP
Sbjct: 164 P--RRSYPPIDEYDRRFPAPRGYSPRAHYRERSP 195
>gi|90076960|dbj|BAE88160.1| unnamed protein product [Macaca fascicularis]
Length = 182
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 62/81 (76%), Gaps = 4/81 (4%)
Query: 105 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 164
SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD TG+V++ +DM YA+
Sbjct: 45 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAV 101
Query: 165 RKLDRSEFR-NAFSRSYVRVR 184
RKLD ++FR + +Y+RV+
Sbjct: 102 RKLDNTKFRSHEGETAYIRVK 122
>gi|119491909|ref|XP_001263449.1| pre-RNA splicing factor Srp2, putative [Neosartorya fischeri NRRL
181]
gi|119411609|gb|EAW21552.1| pre-RNA splicing factor Srp2, putative [Neosartorya fischeri NRRL
181]
Length = 258
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 106/199 (53%), Gaps = 23/199 (11%)
Query: 46 GYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVS 105
G+ F+E+ED DA D + DG +F G RL V+ A G RR + + + +
Sbjct: 3 GFGFIEYEDAMDARDVVP--DGSDFKGERLTVQFARGPRRKEN----FPGPTDRPNMPRP 56
Query: 106 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 164
RR+ +R+LV+GLP + SWQDLKD R++G DV +S+ R++G G V++ + D+K AI
Sbjct: 57 RRTIFRMLVSGLPET-SWQDLKDFARQSGLDVVYSETGREQG--RGFVEFETAADLKTAI 113
Query: 165 RKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSY 224
KLD EF+ + ++ +D R R PY RSRSP RS P +
Sbjct: 114 DKLDGREFKGSRVSCVADIQPHDDRI------FRDPY----RSRSP--RRSYPPIDEYDR 161
Query: 225 S-PRSRSYSPRGKYSRRSP 242
P R YSPR Y RSP
Sbjct: 162 RFPAPRGYSPRAHYRERSP 180
>gi|308499132|ref|XP_003111752.1| hypothetical protein CRE_02981 [Caenorhabditis remanei]
gi|308239661|gb|EFO83613.1| hypothetical protein CRE_02981 [Caenorhabditis remanei]
Length = 317
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 75/116 (64%), Gaps = 10/116 (8%)
Query: 98 SGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSY 157
SG G RRSDYR++V GLP S SWQD+KDH+R AGD+C++ V R GIV++T
Sbjct: 147 SGRQGGPLRRSDYRLIVEGLPPSGSWQDVKDHLREAGDICYANVENGR----GIVEFTRA 202
Query: 158 DDMKYAIRKLDRSEFR-NAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYY 212
+DM AIRK D ++ + + +Y+RV+E D+R S SRSP SR RSRS Y
Sbjct: 203 EDMHKAIRKFDDTKLKSHKGETAYIRVKE-DTRSSRSRSPK----TSRRRSRSNTY 253
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 60/80 (75%), Gaps = 1/80 (1%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKI-PPRPPGYAFLEFEDYRDAE 59
MSS S T+YVGNLP D R +EVEDLF+KYG I ++++K +AF++F+ +RDA+
Sbjct: 1 MSSSSESTIYVGNLPPDVREKEVEDLFHKYGDIRNVEVKTRHGETHSFAFVQFDSHRDAK 60
Query: 60 DAIRGRDGYNFDGYRLRVEL 79
+A+R RDGY+FDG RLRVE
Sbjct: 61 EAVRSRDGYDFDGKRLRVEF 80
>gi|149053808|gb|EDM05625.1| rCG34610, isoform CRA_d [Rattus norvegicus]
Length = 181
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 62/81 (76%), Gaps = 4/81 (4%)
Query: 105 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 164
SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD TG+V++ +DM YA+
Sbjct: 49 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAV 105
Query: 165 RKLDRSEFR-NAFSRSYVRVR 184
RKLD ++FR + +Y+RV+
Sbjct: 106 RKLDNTKFRSHEGETAYIRVK 126
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 21/25 (84%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPI 33
+YVGNLP D R +++ED+FYKYG I
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAI 42
>gi|345793997|ref|XP_865416.2| PREDICTED: serine/arginine-rich splicing factor 4 isoform 3 [Canis
lupus familiaris]
Length = 469
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 79/130 (60%), Gaps = 5/130 (3%)
Query: 47 YAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR- 102
Y F+EF+D RDA+DA+ +G + G R+ VE A G RR S S Y SG +
Sbjct: 6 YGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKY 65
Query: 103 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 162
G R++YR++V L S SWQDLKD+MR+AG+V ++ + R G++++ SY DMK
Sbjct: 66 GPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKR 124
Query: 163 AIRKLDRSEF 172
A+ KLD +E
Sbjct: 125 ALEKLDGTEV 134
>gi|225709420|gb|ACO10556.1| Serine-arginine protein 55 [Caligus rogercresseyi]
Length = 244
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 86/173 (49%), Gaps = 15/173 (8%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+GNLP + R R+VE +G I ++ +K GY F+EF+D RDA+D + DG
Sbjct: 7 VYIGNLPENVRERDVEKFLKDHGRIREVVIK-----SGYGFVEFDDPRDADDVVNDMDGK 61
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSR---------RSDYRVLVTGLPS 119
+F G R+RVE+A R +++YRV+V L S
Sbjct: 62 DFQGGRIRVEMARDPRDRRDRDRGSDRRGGFDRGRDRGGRRGNPPGPKTNYRVVVENLSS 121
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
SWQDLKD+ R AGD+ ++ R G GIV++ S + YA+ + E
Sbjct: 122 RTSWQDLKDYFRAAGDITYTNAHTPRQG-EGIVEFASSKGLDYALDHQNELEL 173
>gi|291224547|ref|XP_002732263.1| PREDICTED: splicing factor, arginine/serine-rich 4-like
[Saccoglossus kowalevskii]
Length = 261
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 99/193 (51%), Gaps = 43/193 (22%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L TR R+VE F +G + +++LK G+ F+EF+D RDA+DA+ +G
Sbjct: 5 VYIGRLSYQTRERDVERFFRGFGHLREVNLK-----NGFGFVEFDDPRDADDAVYELNGK 59
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSR---------------------- 106
+ G R+ +E A G R DR SGG RG R
Sbjct: 60 DLCGERVIIEHARGPVRR----DR----DSGGYRGSERDYRGDRGGGYGPPRRRGGGGGI 111
Query: 107 -------RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDD 159
R+D R++V L S SWQDLKD+MR+AG+V ++ ++ G+V++ +Y D
Sbjct: 112 DKYGPPTRTDNRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKEHKN-EGVVEFATYSD 170
Query: 160 MKYAIRKLDRSEF 172
MK A+ KLD +E
Sbjct: 171 MKNAMSKLDGTEI 183
>gi|171682128|ref|XP_001906007.1| hypothetical protein [Podospora anserina S mat+]
gi|170941023|emb|CAP66673.1| unnamed protein product [Podospora anserina S mat+]
Length = 319
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 129/267 (48%), Gaps = 34/267 (12%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGP--IVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ S+ LY+GNLP + ++E F +G I +I L G+ F+E++D DA
Sbjct: 1 MTEVSATRLYLGNLPRNATKADIEAHFSTHGTGDIAEIKLMN-----GFGFIEYKDPMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDR------YSSYSSGGSRGVSRRSDYRV 112
D + DG F G RL V+ A G R ++ +++ S R RR+ +R+
Sbjct: 56 RDVVP--DGSTFLGERLTVQFARGNRHRENNGGGGGGGGGFNNDRSSAPR--PRRTPHRL 111
Query: 113 LVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSE 171
++GLP SWQDLKD R G DV +S+ R+ G G V++ + D++ A+ KL+ +
Sbjct: 112 QISGLPPDTSWQDLKDFARTPGLDVVYSETGRN-GSSEGFVEFETAADLRTAVEKLNERD 170
Query: 172 FR----NAFSRSYVRVREYDSRRSYS--RSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYS 225
F+ + + + D RS S R P R Y R R P R+ SP R+ Y
Sbjct: 171 FKGVRVTCTANTQADIPRGDRGRSMSPRRGPGRMNDYDR---RGP--PRAYSPHRNGDYR 225
Query: 226 P--RSRSYSPRGKY--SRRSPSLSPAR 248
P R RS PR Y R P SP R
Sbjct: 226 PDYRDRSPVPRRDYYEDRARPYRSPPR 252
>gi|325087601|gb|EGC40911.1| conserved hypothetical protein [Ajellomyces capsulatus H88]
Length = 316
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/233 (35%), Positives = 116/233 (49%), Gaps = 38/233 (16%)
Query: 21 REVEDLFYKY---GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRV 77
+E+ED F + G I +I L G+ F+E+ED DA+D + G +F G RL V
Sbjct: 35 QEIEDHFNSHHGSGKITEIKLMS-----GFGFIEYEDAMDAKDVVPAFHGTDFKGERLTV 89
Query: 78 ELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DV 136
+ A G R + +S S S RR+ YR+ ++GLP + SWQDLKD R++G DV
Sbjct: 90 QFARGPRHKET----FSGPSDRSSAPRPRRTIYRMQISGLPET-SWQDLKDFARQSGLDV 144
Query: 137 CFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSP 196
+S+ D G V++ + D+K A+ KLD EF+ + ++ + R+
Sbjct: 145 VYSETGHD---GRGFVEFETGSDLKTAVEKLDGREFKGSRVLCTQDIQSQEDRQ------ 195
Query: 197 SRSPYYSRSRSR----SPY--YSRSRSPSRSWSYSPRSRSYSPRGKYSRRSPS 243
R PY SRS R PY Y R R P RS YSPR Y RSP+
Sbjct: 196 PRDPYRSRSPGRRGGYHPYDDYDR-RGPPRS--------GYSPRNHYRERSPA 239
>gi|66360300|ref|XP_627232.1| splicing factor SRP40 like 2x RRM domains [Cryptosporidium parvum
Iowa II]
gi|46228840|gb|EAK89710.1| splicing factor SRP40 like 2x RRM domains [Cryptosporidium parvum
Iowa II]
Length = 416
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 120/243 (49%), Gaps = 27/243 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VGNLP ++++D F K G I ++LK + F+E+ED AE A R DG
Sbjct: 19 VFVGNLPPGYAEQDLKDFFSKVGEIKKLELKQ-----RFCFIEYEDETQAEAAHRELDGV 73
Query: 69 NFDGYRLRVE----LAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQ 124
F G + V+ + ++++ +Y+ RG R+ +RV V L +ASW+
Sbjct: 74 EFGGQVIAVQPHDPMVRNKETNAANKPQYNRPLPSDGRGPPRKH-FRVCVFNLDDNASWR 132
Query: 125 DLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVR 184
DLKD+ R+ G+V +S VF +G G+V+Y + ++MK A+ ++ F R +
Sbjct: 133 DLKDYGRQIGEVNYSAVFHYQGQKVGVVEYLTVEEMKRALEEIPNLPFLGKSIRVEEDIG 192
Query: 185 EYDSRRSYS-------RSP---SRSPYYSRSRSRSPYYS------RSRSPSRSWSYSPRS 228
+ D + + RSP S PY + R+R Y S RSRSP R Y R
Sbjct: 193 QLDRELAAANGYGAKRRSPPPFSSGPYNTGGRARGRYPSPSRFRMRSRSPRRD-PYDRRE 251
Query: 229 RSY 231
RS+
Sbjct: 252 RSH 254
>gi|156402923|ref|XP_001639839.1| predicted protein [Nematostella vectensis]
gi|156226970|gb|EDO47776.1| predicted protein [Nematostella vectensis]
Length = 185
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 101/181 (55%), Gaps = 27/181 (14%)
Query: 3 SRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAI 62
SR ++VG LP R++E F +G I DI+LK G+AF+EF+D RDA+DA+
Sbjct: 2 SREGGRVFVGRLPPRANDRDLEKFFKGFGRINDINLK-----QGFAFVEFDDARDADDAV 56
Query: 63 RGRDGYNFDGYRLRVELAH-----------GGRRHSSSMDRYSSYSSGGSRGVSRRSDYR 111
+ G R+ VE AH G R S DRY Y++ +YR
Sbjct: 57 YELNHKELLGERVSVEHAHPSRGGGGGGGRGFRDRSPRRDRYPPYNT----------EYR 106
Query: 112 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSE 171
++V L + A WQDLKD+MR+AG+V F+Q +DR G G+ D+++ DM YA++KLD +E
Sbjct: 107 LIVENLSTRAGWQDLKDYMRQAGEVTFTQCHKDRVG-EGVCDFSNESDMLYALKKLDGTE 165
Query: 172 F 172
Sbjct: 166 L 166
>gi|157133042|ref|XP_001662753.1| arginine/serine-rich splicing factor [Aedes aegypti]
gi|108870967|gb|EAT35192.1| AAEL012621-PA [Aedes aegypti]
Length = 342
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 92/184 (50%), Gaps = 26/184 (14%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDA-IRGRDG 67
+YVG LP R R++E F YG DI +K GY F+EFEDYRDA+DA +
Sbjct: 6 VYVGGLPHGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAPTQTHYI 60
Query: 68 YNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR-------------------GVSRRS 108
+ YR+ VE A G R S + Y R G R+
Sbjct: 61 FLLLIYRVTVEPARGTARGGGSRRDHDRYDRYDRRGGGGRYDKNRSNSRNSSRYGPPLRT 120
Query: 109 DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLD 168
+YR+ V L S SWQDLKD+MR+AG+V ++ + R G+V++ + DMK AI KLD
Sbjct: 121 EYRLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRKN-EGVVEFATSSDMKTAIDKLD 179
Query: 169 RSEF 172
+E
Sbjct: 180 DTEL 183
>gi|345315998|ref|XP_001512981.2| PREDICTED: hypothetical protein LOC100082305, partial
[Ornithorhynchus anatinus]
Length = 393
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 80/133 (60%), Gaps = 5/133 (3%)
Query: 44 PPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGG 100
P Y F+EF+D RDA+DA+ +G + G R+ VE A G RR S S Y SG
Sbjct: 23 PVWYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGR 82
Query: 101 SR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDD 159
+ G R++YR++V L S SWQDLKD+MR+AG+V ++ + R G++++ SY D
Sbjct: 83 DKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGR-KNEGVIEFVSYSD 141
Query: 160 MKYAIRKLDRSEF 172
MK A+ KLD +E
Sbjct: 142 MKRALEKLDGTEV 154
>gi|417410943|gb|JAA51935.1| Putative serine/arginine-rich splicing factor 4, partial [Desmodus
rotundus]
Length = 467
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 79/130 (60%), Gaps = 5/130 (3%)
Query: 47 YAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR- 102
Y F+EF+D RDA+DA+ +G + G R+ VE A G RR S S Y SG +
Sbjct: 1 YGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKY 60
Query: 103 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 162
G R++YR++V L S SWQDLKD+MR+AG+V ++ + R G++++ SY DMK
Sbjct: 61 GPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKR 119
Query: 163 AIRKLDRSEF 172
A+ KLD +E
Sbjct: 120 ALEKLDGTEV 129
>gi|56797744|ref|NP_001008732.1| serine/arginine-rich splicing factor 6b [Danio rerio]
gi|56541079|gb|AAH86820.1| Splicing factor, arginine/serine-rich 6b [Danio rerio]
Length = 355
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 94/178 (52%), Gaps = 20/178 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R ++++ F YG +++ DLK GY F+EFED RDA+DA+ +G
Sbjct: 4 VYIGKLSYHVREKDIQRFFGGYGKLMETDLK-----NGYGFVEFEDTRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR--------------GVSRRSDYRVLV 114
G R+ VE A G RR G S G R++YR++V
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYGGGYGGFGGRSNSGYSSRSRSGRDKYGPPVRTEYRLIV 118
Query: 115 TGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
L S SWQDLKD MR+AG+V ++ ++R G++++ S+ DM+ A+ KLD ++
Sbjct: 119 ENLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSHSDMRRALDKLDVTDI 175
>gi|388856974|emb|CCF49394.1| related to pre-mrna splicing factor srp55 [Ustilago hordei]
Length = 259
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 96/194 (49%), Gaps = 31/194 (15%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS+R +YVG LP D R ++EDLF YG + D+ + + F+EFE +RDAED
Sbjct: 1 MSTR----VYVGKLPADVRRGDIEDLFRDYGRLYDVRIM-----GTFGFVEFEHHRDAED 51
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSS-----MDRYSSYSSGGSRGVSR--------- 106
A++ DG NF G R+ V+ A R D Y GG SR
Sbjct: 52 AVKDFDGKNFMGERIVVQHAKQSERRRPEPAGYGSDPYDRRGGGGREPPSRYGSSVAPPP 111
Query: 107 -------RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDD 159
R +R +V+ LP + SWQDLKD R G V F+ V R G+++Y + DD
Sbjct: 112 RREPRLRRGQFRCIVSNLPPNTSWQDLKDIGREHGSVSFADVDAARPD-EGVIEYDNRDD 170
Query: 160 MKYAIRKLDRSEFR 173
+ A+ K++ +E R
Sbjct: 171 YERALDKIEGTELR 184
>gi|260819154|ref|XP_002604902.1| hypothetical protein BRAFLDRAFT_114372 [Branchiostoma floridae]
gi|229290231|gb|EEN60912.1| hypothetical protein BRAFLDRAFT_114372 [Branchiostoma floridae]
Length = 289
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 96/182 (52%), Gaps = 24/182 (13%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G LP R ++VE F YG I +I+LK G+ F+EF+D RDA+DA+ +G
Sbjct: 5 VYIGRLPYHAREKDVERFFRGYGRIREINLK-----NGFGFVEFDDPRDADDAVYELNGK 59
Query: 69 NFDGYRLRVELAHGGRRHSSS------------MDRYSSYSSGGSR------GVSRRSDY 110
G R+ VE A G R +D G G R+DY
Sbjct: 60 ELCGERVIVENARGPARGGGGFRGGGYGYRPGWLDNGRGSGGGRGSDSRNRYGPPVRTDY 119
Query: 111 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRS 170
R++V L S SWQDLKD+MR+AG+V ++ + + GIV++ +Y DM+ A+RKLD +
Sbjct: 120 RLIVENLSSRCSWQDLKDYMRQAGEVTYADAHK-QNKNEGIVEFATYRDMENALRKLDGT 178
Query: 171 EF 172
E
Sbjct: 179 EI 180
>gi|393245625|gb|EJD53135.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 265
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 88/168 (52%), Gaps = 7/168 (4%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
+R LY+G +P D R +V+ F YG IVD + G+ F+EFE +DAE+ ++
Sbjct: 2 TRRLYLGRIPTDARSEDVQKFFEGYGRIVDCRVMT-----GFGFVEFESSKDAEEVVQVF 56
Query: 66 DGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQD 125
+G F G + VE A R Y + R R R++V+G+ SWQD
Sbjct: 57 NGKAFMGAPILVEFAKENRPRRDDDRGYGGGGAYPPRA-RRPPGVRLIVSGISRDTSWQD 115
Query: 126 LKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
LKD R AG++ F+ + RD G G+++Y S DD +A++ LD + R
Sbjct: 116 LKDFGREAGNITFADIDRDVPGQ-GVLEYMSRDDADHAVKTLDGKDLR 162
>gi|198421230|ref|XP_002126938.1| PREDICTED: similar to splicing factor, arginine/serine-rich 4
isoform 2 [Ciona intestinalis]
Length = 280
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 93/177 (52%), Gaps = 20/177 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R +VE F YG I D+ LK G+ F+ F+D RDA+DAI +G
Sbjct: 7 VYIGRLSHRARENDVEHFFRGYGKINDLMLK-----NGFGFVIFDDERDADDAIHDLNGK 61
Query: 69 NFDGYRLRVELAHGGRR-------------HSSSMDRYSSYSSGGSRGVSRRSDYRVLVT 115
+ G R+ +E+A G R SSS ++G+ YR++V
Sbjct: 62 SLCGERVMLEIAKGTPRGPGGDRRESSSRRSSSSSYYQQQQPRSSTKGIPNHG-YRLIVE 120
Query: 116 GLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
L S +WQDLKD+MR+ G+V ++ R R G+V+++S +MKYAI KL+ +E
Sbjct: 121 NLSSRVTWQDLKDYMRQCGEVVYADANRYRRN-EGVVEFSSRKEMKYAIEKLNGTEI 176
>gi|225556594|gb|EEH04882.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 314
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/233 (35%), Positives = 117/233 (50%), Gaps = 40/233 (17%)
Query: 21 REVEDLFYKY---GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRV 77
+E+ED F + G I +I L G+ F+E+ED DA+D + DG +F G RL V
Sbjct: 35 QEIEDHFNSHHGSGKITEIKLMS-----GFGFIEYEDAMDAKDVVP--DGTDFKGERLTV 87
Query: 78 ELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DV 136
+ A G R + +S S S RR+ YR+ ++GLP + SWQDLKD R++G DV
Sbjct: 88 QFARGPRHKET----FSGPSDRSSAPRPRRTIYRMQISGLPET-SWQDLKDFARQSGLDV 142
Query: 137 CFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSP 196
+S+ D G V++ + D+K A+ KLD EF+ + ++ + R+
Sbjct: 143 VYSETGHD---GRGFVEFETGSDLKTAVEKLDGREFKGSRVLCTQDIQSQEDRQ------ 193
Query: 197 SRSPYYSRSRSR----SPY--YSRSRSPSRSWSYSPRSRSYSPRGKYSRRSPS 243
R PY SRS R PY Y R R P RS YSPR Y RSP+
Sbjct: 194 PRDPYRSRSPGRRGGYHPYDDYDR-RGPPRS--------GYSPRNHYRERSPA 237
>gi|119596372|gb|EAW75966.1| splicing factor, arginine/serine-rich 6, isoform CRA_c [Homo
sapiens]
Length = 383
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 83/151 (54%), Gaps = 17/151 (11%)
Query: 38 LKIPPR------PPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRH----- 86
L PPR P Y F+EFED RDA+DA+ +G G R+ VE A G RR
Sbjct: 61 LTTPPRLSGPRTAPRYGFVEFEDSRDADDAVYELNGKELCGERVIVEHARGPRRDRDGYS 120
Query: 87 ----SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQV 141
S S +SG + G R++YR++V L S SWQDLKD MR+AG+V ++
Sbjct: 121 YGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADA 180
Query: 142 FRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
++R G++++ SY DMK A+ KLD +E
Sbjct: 181 HKERTN-EGVIEFRSYSDMKRALDKLDGTEI 210
>gi|332024474|gb|EGI64672.1| Serine-arginine protein 55 [Acromyrmex echinatior]
Length = 367
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 93/185 (50%), Gaps = 38/185 (20%)
Query: 20 MREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVEL 79
R++E F YG D+ +K GY F+EF+DYRDA+DA+ +G G R+ VE
Sbjct: 50 QRDLERFFRGYGRFRDVLIK-----NGYGFVEFDDYRDADDAVYELNGKELLGERITVER 104
Query: 80 AHGGRRHSS---------------------------SMDRYSSYSSGGSRGVSR-----R 107
A G R S S++R + +S + + R R
Sbjct: 105 ARGTPRGSDQWRYGDSRGGYGDSRRSARDDMRHDRDSVNRNTRTASSYKQSLPRYGPPTR 164
Query: 108 SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKL 167
++YR+ V L S SWQDLKD+MR+AG+V ++ + R G+V++ +Y D+K AI KL
Sbjct: 165 TEYRLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRN-EGVVEFATYSDLKNAIDKL 223
Query: 168 DRSEF 172
D +E
Sbjct: 224 DDTEL 228
>gi|409082207|gb|EKM82565.1| hypothetical protein AGABI1DRAFT_111169 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426200034|gb|EKV49958.1| hypothetical protein AGABI2DRAFT_190388 [Agaricus bisporus var.
bisporus H97]
Length = 289
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 89/168 (52%), Gaps = 10/168 (5%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
SR LY+G LP D R +V+ F +G I+D + G+ F+EFE +DAE+A+
Sbjct: 2 SRRLYLGRLPPDARSEDVQKFFDGFGRIIDCRVMT-----GFGFVEFESPKDAEEAVHTF 56
Query: 66 DGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQD 125
+G +F G + VE A R Y + G R R R++VTG+ SWQD
Sbjct: 57 NGKSFMGANIVVEFAKESRPRREP---YENERGHGPR-ARRPPGIRLVVTGVSRDTSWQD 112
Query: 126 LKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
LKD R AG V F+ + R+ G G+++Y + +D A+R+LD E R
Sbjct: 113 LKDFGRDAGSVSFADIDRESPGQ-GVLEYLNREDADRAVRELDGKELR 159
>gi|426222714|ref|XP_004005530.1| PREDICTED: uncharacterized protein LOC101109078 [Ovis aries]
Length = 437
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 79/130 (60%), Gaps = 5/130 (3%)
Query: 47 YAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR- 102
Y F+EF+D RDA+DA+ +G + G R+ VE A G RR S S Y SG +
Sbjct: 23 YGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKY 82
Query: 103 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 162
G R++YR++V L S SWQDLKD+MR+AG+V ++ + R G++++ SY DMK
Sbjct: 83 GPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKR 141
Query: 163 AIRKLDRSEF 172
A+ KLD +E
Sbjct: 142 ALEKLDGTEV 151
>gi|223648456|gb|ACN10986.1| Splicing factor, arginine/serine-rich 5 [Salmo salar]
Length = 315
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 93/190 (48%), Gaps = 32/190 (16%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R R+VE F YG I +++LK G+ F+EF+D+RDA+DA+ +G
Sbjct: 6 VFIGRLSPHARERDVEKFFKGYGRIREVNLK-----NGFGFVEFDDHRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMD---------------RYSSYSSGGSR----------- 102
R+ +E A R R+SSY G
Sbjct: 61 ELCSERVTIEHARSRRGRGGGPGMGGGGGGGGGGRFSPRFSSYRQGSGGHGGGGGGSSRY 120
Query: 103 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 162
G R+++R++V L S SWQDLKD MR+AG+V F R G+V++ S+ DMK
Sbjct: 121 GPPVRTEHRIIVENLSSRISWQDLKDLMRKAGEVTFVDAHRTNKN-EGVVEFASHSDMKN 179
Query: 163 AIRKLDRSEF 172
AI KLD ++
Sbjct: 180 AIDKLDGTDL 189
>gi|209154606|gb|ACI33535.1| Splicing factor, arginine/serine-rich 5 [Salmo salar]
Length = 329
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 90/186 (48%), Gaps = 28/186 (15%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R R+VE F YG I +++LK G+ F+EF+D RDA+DA+ +G
Sbjct: 6 VFIGRLSPHARERDVEKFFKGYGRIREVNLKN-----GFGFVEFDDPRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMD----------RYSSYSSGGSRGVSR------------ 106
R+ +E A R R+SSY G
Sbjct: 61 ELCSERVTIEHARSRRGRGGGPGMGGGGGRFSPRFSSYRQGSGDRRGGGGGGSSRYGPPV 120
Query: 107 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 166
R+++R++V L S SWQDLKD MR+ G+V F R G+V++ S+ DMK A+ K
Sbjct: 121 RTEHRIIVENLSSRISWQDLKDLMRKVGEVTFVDAHRTNKN-EGVVEFASHSDMKNALDK 179
Query: 167 LDRSEF 172
LD ++
Sbjct: 180 LDGTDL 185
>gi|256077392|ref|XP_002574989.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
gi|353229591|emb|CCD75762.1| putative arginine/serine-rich splicing factor [Schistosoma mansoni]
Length = 370
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 88/171 (51%), Gaps = 13/171 (7%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG +P R++E F YG + DI LK GY F+EF++ +DA+DA+ G
Sbjct: 4 VYVGRIPPRCTERDIERFFKGYGRLRDIVLK-----NGYGFVEFDNEKDADDAVYDLHGR 58
Query: 69 NFDGYRLRVELA-------HGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSA 121
+ G RL VE A G RR S G R++YRV+V L S
Sbjct: 59 DLRGERLIVEHARLPPGTRGGSRRAGGGGGGGGGGSGRDRYGPPTRTEYRVIVENLSSRV 118
Query: 122 SWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
SWQDLKD MR+AG+V ++ + GIV++ +Y DMK AI K D E
Sbjct: 119 SWQDLKDLMRKAGEVTYADAHKS-AKNDGIVEFAAYADMKEAIEKFDGYEL 168
>gi|156402467|ref|XP_001639612.1| predicted protein [Nematostella vectensis]
gi|156226741|gb|EDO47549.1| predicted protein [Nematostella vectensis]
Length = 174
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 94/173 (54%), Gaps = 16/173 (9%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIR 63
S +Y+G LP TR +V+ FY YG I +I LK GY F+EF+ DAEDA+
Sbjct: 2 SNRVYLGRLPYGTREDDVKKFFYTYGRFKIREIILK-----DGYGFVEFDYSDDAEDAVY 56
Query: 64 GRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR---GVSRRSDYRVLVTGLPSS 120
+G G R+ VE A G +S YSS G +R G R+ +R+ V L S
Sbjct: 57 ECNGKKMLGERILVEPARG-----TSKGGYSSGRRGRARDKYGPPLRTPWRMTVENLSSR 111
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
SWQDLKD+ R+ GDV + + + G G++++ + D+K A+RKLD E +
Sbjct: 112 VSWQDLKDYCRQIGDVTYGDAHKQKQG-EGVIEFATKKDLKKALRKLDGKELK 163
>gi|221117454|ref|XP_002167286.1| PREDICTED: uncharacterized protein LOC100197032 [Hydra
magnipapillata]
Length = 394
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 90/177 (50%), Gaps = 23/177 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G LPGD R R+++ F K+G + +I +K Y FL++E R+AEDA+
Sbjct: 28 IYIGKLPGDIRERDIDKAFSKFGHVREIAMK-----GNYCFLQYEKTREAEDAVYEMHDR 82
Query: 69 NFDGYRLRVELAHG----GRRHSSSMDRYSSYSSGGSRGVS-------------RRSDYR 111
+F G R++VE A G R S Y +RSDYR
Sbjct: 83 SFFGERIQVEHARQPKEFGFRAPSRFGGSRGYGGYSRSSTYSSSRDYSRRRSPPQRSDYR 142
Query: 112 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLD 168
+ VT L + QDLK M++AGDV FS R R G G+V++ S DM+ A++KLD
Sbjct: 143 LSVTNLSTRCDAQDLKAVMQKAGDVVFSDAHRRRVG-EGVVEFASRKDMERALKKLD 198
>gi|256077394|ref|XP_002574990.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
gi|353229592|emb|CCD75763.1| putative arginine/serine-rich splicing factor [Schistosoma mansoni]
Length = 371
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 85/172 (49%), Gaps = 14/172 (8%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG +P R++E F YG + DI LK GY F+EF++ +DA+DA+ G
Sbjct: 4 VYVGRIPPRCTERDIERFFKGYGRLRDIVLK-----NGYGFVEFDNEKDADDAVYDLHGR 58
Query: 69 NFDGYRLRVELA--------HGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
+ G RL VE A R G R++YRV+V L S
Sbjct: 59 DLRGERLIVEHARLPPGTRGGSRRAGGGGGGGGGGSGRDRRYGPPTRTEYRVIVENLSSR 118
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
SWQDLKD MR+AG+V ++ + GIV++ +Y DMK AI K D E
Sbjct: 119 VSWQDLKDLMRKAGEVTYADAHKS-AKNDGIVEFAAYADMKEAIEKFDGYEL 169
>gi|345309522|ref|XP_001517768.2| PREDICTED: serine/arginine-rich splicing factor 5-like, partial
[Ornithorhynchus anatinus]
Length = 251
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 86/158 (54%), Gaps = 12/158 (7%)
Query: 21 REVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELA 80
++VE F YG I DIDLK G+ F+EFED RDA+DA+ DG R+ +E A
Sbjct: 2 KDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGKELCSERVTIEHA 56
Query: 81 HGGRRHSSSMDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSASWQDLKDHMRRAG 134
R RYS +SS R R R++ R++V L S SWQDLKD MR+AG
Sbjct: 57 RARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVSWQDLKDFMRQAG 116
Query: 135 DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
+V F+ R + G+V++ SY D+K AI KL E
Sbjct: 117 EVTFADAHRPKLN-EGVVEFASYSDLKNAIEKLSGKEI 153
>gi|343426008|emb|CBQ69540.1| related to pre-mrna splicing factor srp55 [Sporisorium reilianum
SRZ2]
Length = 248
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 97/192 (50%), Gaps = 29/192 (15%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS+R +Y+G LP D R ++EDLF YG + D+ + + F+EFE RDAED
Sbjct: 1 MSTR----VYIGKLPADVRRGDIEDLFRDYGRLYDVRIM-----GSFGFVEFEHPRDAED 51
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSRGV------------- 104
A++ DG NF G R+ V+ A G R + Y+S GG+R
Sbjct: 52 AVKDFDGKNFMGERILVQHAKSGERRRAEPAGYASDPYDRRGGARDAPSSRYGAPPPPRR 111
Query: 105 ---SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMK 161
RR +R +++ LP + SWQDLKD R G + F+ V + G ++Y + DD +
Sbjct: 112 EPRLRRGQFRCVISNLPPNTSWQDLKDIGREHGSISFADVDPNNPD-EGFIEYDNRDDYE 170
Query: 162 YAIRKLDRSEFR 173
A+ K++ E R
Sbjct: 171 RALDKIEGIELR 182
>gi|380482542|emb|CCF41176.1| pre-mRNA splicing factor [Colletotrichum higginsianum]
Length = 312
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 20/247 (8%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP + +VE F +G I +I L G+ F+E++D DA
Sbjct: 1 MTEVSSTRLYLGNLPRNATKADVEAHFATHGTGEITEIKLMN-----GFGFIEYKDAMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLP 118
D + DG +F G RL V+ A G R + +++ + RR+ +R+ +TGLP
Sbjct: 56 RDVVP--DGSDFMGERLTVQFARGTRHREGGS--AAGFNNERAPPRPRRTPHRMQITGLP 111
Query: 119 SSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFS 177
+ SWQDLKD R++ DV +S+ RD G G V++ + D++ A+ KLD EF+ +
Sbjct: 112 TDTSWQDLKDFARQSSLDVVYSETGRD-GNGRGFVEFETAADLRTAVEKLDGREFKGSRV 170
Query: 178 RSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPY--YSRSRSPSRSWSYSPRSRSYSPRG 235
+ R + SRSP R P Y R R P R YSPR Y R
Sbjct: 171 TCVADTQPDMPPRDLRGARSRSPGGGRRPYPPPVDDYER-RGPPR--GYSPRRDGY--RE 225
Query: 236 KYSRRSP 242
Y RSP
Sbjct: 226 GYRERSP 232
>gi|226467221|emb|CAX76091.1| Splicing factor, arginine/serine-rich 4 [Schistosoma japonicum]
Length = 372
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 85/175 (48%), Gaps = 17/175 (9%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG +P R++E F YG + DI LK GY F+EF++ +DA+DA+ G
Sbjct: 4 VYVGRIPPRCTERDIERFFKGYGRLRDIVLK-----NGYGFVEFDNEKDADDAVYDLHGR 58
Query: 69 NFDGYRLRVELA-----------HGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGL 117
+ G RL VE A G G R++YRV+V L
Sbjct: 59 DLRGERLIVEHARLPPGTRGGSRRAGGGGGGGGGGGGGSGRDRRYGPPTRTEYRVIVENL 118
Query: 118 PSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
S SWQDLKD MR+AG+V ++ + GIV++ +Y DMK AI K D E
Sbjct: 119 SSRVSWQDLKDLMRKAGEVTYADAHKS-AKNDGIVEFAAYADMKEAIEKFDGYEL 172
>gi|226467219|emb|CAX76090.1| Splicing factor, arginine/serine-rich 4 [Schistosoma japonicum]
Length = 372
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 85/175 (48%), Gaps = 17/175 (9%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG +P R++E F YG + DI LK GY F+EF++ +DA+DA+ G
Sbjct: 4 VYVGRIPPRCTERDIERFFKGYGRLRDIVLK-----NGYGFVEFDNEKDADDAVYDLHGR 58
Query: 69 NFDGYRLRVELA-----------HGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGL 117
+ G RL VE A G G R++YRV+V L
Sbjct: 59 DLRGERLIVEHARLPPGTRGGSRRAGGGGGGGGGGGGGSGRDRRYGPPTRTEYRVIVENL 118
Query: 118 PSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
S SWQDLKD MR+AG+V ++ + GIV++ +Y DMK AI K D E
Sbjct: 119 SSRVSWQDLKDLMRKAGEVTYADAHKS-AKNDGIVEFAAYADMKEAIEKFDGYEL 172
>gi|453083473|gb|EMF11519.1| hypothetical protein SEPMUDRAFT_150428 [Mycosphaerella populorum
SO2202]
Length = 359
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 85/164 (51%), Gaps = 16/164 (9%)
Query: 22 EVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVEL 79
+VE+ F +G I +I L G+ F+E++D DA D + G F G RL V+
Sbjct: 50 DVENHFNTHGTGEITEIKLMN-----GFGFIEYKDAMDARDVVPAFHGSEFMGERLVVQF 104
Query: 80 AHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCF 138
A G R + + RR+ +R+ +TGLP SWQDLKD R++G DV +
Sbjct: 105 ARGSTRPREGFEHQPRMAP-----RPRRTVHRMTITGLPFETSWQDLKDFARQSGLDVVY 159
Query: 139 SQVFRDR---GGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRS 179
S+V R+R G G V+Y + D+ A+ KLD SEF+ A R
Sbjct: 160 SEVNRERDPAGTGKGFVEYETAADLASAVEKLDNSEFKGATVRC 203
>gi|298714075|emb|CBJ33838.1| similar to arginine/serine-rich splicing factor 7 [Ectocarpus
siliculosus]
Length = 249
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 92/189 (48%), Gaps = 23/189 (12%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M ++VGNL R++ D F K+G + + + PPG+AF+ F D RDA D
Sbjct: 1 MGDVPGTKVWVGNLGSTCEERDLRDEFSKFGELNKV--WVARNPPGFAFVWFADDRDAGD 58
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR-----------------G 103
A+R DG + G RVE++H R GG G
Sbjct: 59 AVREIDGKSIAGREWRVEVSHQRGRDRGPPGGGYGGGGGGGGYGGGGGGGGGYGAPRVGG 118
Query: 104 VSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYA 163
+ R+ Y+V +TGLP W +LKD +R+AGDV ++ V G G+ ++++ DDM A
Sbjct: 119 AAPRTGYKVRITGLPEGMRWSELKDFVRKAGDVTYADVR----GDEGVAEFSNRDDMSRA 174
Query: 164 IRKLDRSEF 172
+R+LD + F
Sbjct: 175 VRELDDTYF 183
>gi|296824244|ref|XP_002850623.1| pre-mRNA splicing factor [Arthroderma otae CBS 113480]
gi|238838177|gb|EEQ27839.1| pre-mRNA splicing factor [Arthroderma otae CBS 113480]
Length = 363
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 130/304 (42%), Gaps = 83/304 (27%)
Query: 1 MSSRSSRTLYVGNLPGDTRM-------------------REVEDLF--YKYGPIVDIDLK 39
MS SS LY+GNLP + + +++E+ F + G I +I L
Sbjct: 1 MSEVSSTRLYLGNLPRNGMLLVLLHPISVTVIVSLSFNKQDIEEHFGSHGTGKITEIKLM 60
Query: 40 IPPRPPGYAFLEFEDYRDAEDAIRGRD--------------------------------- 66
G+ F+E+ED DA+D + G D
Sbjct: 61 Q-----GFGFIEYEDAMDAKDVVPGEDTSVVAFTFLDFFFLCFSLFSVYSMDDALLIMGP 115
Query: 67 -------GYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPS 119
G +F G RL V+ A G RR + + RR+ YR+ +TGLP
Sbjct: 116 VLILPSNGTDFKGERLTVQFARGPRRREP----FPGPPERSTAPRPRRTIYRMQITGLPE 171
Query: 120 SASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSR 178
+ SWQDLKD R++G DV +S+ RDR G G V++ + +D++ A+ KLD ++F+ +
Sbjct: 172 T-SWQDLKDFARQSGLDVVYSET-RDRDG-KGFVEFENGNDLRTAVEKLDGTDFKGSRVT 228
Query: 179 SYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYSPRGKYS 238
++ R + PY SRS R P Y P+ + R YSPRG Y
Sbjct: 229 CTADIQPPMEDRV-----PKDPYRSRSPRRGPPYP----PAEDYDRRGPPRGYSPRGHYR 279
Query: 239 RRSP 242
RSP
Sbjct: 280 ERSP 283
>gi|402576825|gb|EJW70782.1| hypothetical protein WUBG_18310 [Wuchereria bancrofti]
Length = 153
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/113 (48%), Positives = 69/113 (61%), Gaps = 3/113 (2%)
Query: 17 DTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLR 76
D + R++ED+FYKYG I ID+K P +AF+EF+D RDA DA+ GRDGY+FDG R+R
Sbjct: 31 DVKQRDLEDIFYKYGRINFIDIKFTRDVP-FAFIEFDDPRDARDAVHGRDGYDFDGCRIR 89
Query: 77 VELAHGGRRHSSSMDRY--SSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLK 127
VEL G S RRS YRV+V+GLP + SWQDLK
Sbjct: 90 VELTRGVGPRGPGGRPLYGPDPRSPRRGPPPRRSGYRVIVSGLPDTGSWQDLK 142
>gi|226467223|emb|CAX76092.1| Splicing factor, arginine/serine-rich 4 [Schistosoma japonicum]
Length = 372
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 85/175 (48%), Gaps = 17/175 (9%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG +P R++E F YG + DI LK GY F+EF++ +DA+DA+ G
Sbjct: 4 VYVGRIPPRCTERDIERFFKGYGRLRDIVLK-----NGYGFVEFDNEKDADDAVYDLHGR 58
Query: 69 NFDGYRLRVELA-----------HGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGL 117
+ G RL VE A G G R++YRV+V L
Sbjct: 59 DLRGERLIVEHARLPPGTRGGSRRAGGGGGGGGGGGGGSGRDRRYGPPTRTEYRVIVENL 118
Query: 118 PSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
S SWQDLKD MR+AG+V ++ + GIV++ +Y DMK AI K D E
Sbjct: 119 SSRVSWQDLKDLMRKAGEVTYADAHKS-AKNDGIVEFAAYADMKEAIEKFDGYEL 172
>gi|332858668|ref|XP_003317036.1| PREDICTED: serine/arginine-rich splicing factor 6 [Pan troglodytes]
Length = 407
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 79/138 (57%), Gaps = 11/138 (7%)
Query: 45 PGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRH---------SSSMDRYSS 95
P Y F+EFED RDA+DA+ +G G R+ VE A G RR S S
Sbjct: 98 PRYGFVEFEDSRDADDAVYELNGKELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSR 157
Query: 96 YSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDY 154
+SG + G R++YR++V L S SWQDLKD MR+AG+V ++ ++R G++++
Sbjct: 158 RTSGRDKYGPPVRTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEF 216
Query: 155 TSYDDMKYAIRKLDRSEF 172
SY DMK A+ KLD +E
Sbjct: 217 RSYSDMKRALDKLDGTEI 234
>gi|340939264|gb|EGS19886.1| splicing factor srp2-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 307
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 84/249 (33%), Positives = 113/249 (45%), Gaps = 46/249 (18%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
SS LY+GNLP +VE F K+G ++KI G+ F+E++D DA D +
Sbjct: 6 SSTRLYLGNLPKHATKADVEAHFSKHGTGEITEIKIMN---GFGFIEYKDPMDARDVVPA 62
Query: 65 RDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQ 124
G F G RL V+ A G R ++ + Y + RR+ +R+ +TGLP SWQ
Sbjct: 63 FHGSMFMGERLTVQFARGNRHRDTA----NGYGHERAPPRPRRTPHRMEITGLPDGCSWQ 118
Query: 125 DLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRV 183
AG DV +++ R GIV++ + DM+ AI KLD EF+N
Sbjct: 119 --------AGVDVVYTETSRRGNSWEGIVEFETPADMRTAIEKLDGREFKN--------- 161
Query: 184 REYDSRRSYSRSPSRSPYYSRSRSRSPY----------YSRSRSPSRSWSYSPRSRSYSP 233
S + PS P Y R RSRSP Y R P R YSPR Y
Sbjct: 162 -------SRTAQPSEPPRYDRGRSRSPIRRYPPPPLDDYDRRGPPPR--GYSPRRDGY-- 210
Query: 234 RGKYSRRSP 242
R Y R+P
Sbjct: 211 RDAYRERTP 219
>gi|449502419|ref|XP_004174507.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2
[Taeniopygia guttata]
Length = 265
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 86/174 (49%), Gaps = 21/174 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EFED RDA+DA+ Y
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAV-----Y 55
Query: 69 NFDGYRL---RVELAHGGRRHSSSMDRY-------SSYSSGGSRGVSRRSDYRVLVTGLP 118
DG L RV + H R S R++ R++V L
Sbjct: 56 ELDGKELCSERVTIEHARARSRGRGRGRYSDRFSSRRPRSDRRNAPPLRTENRLIVENLS 115
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
S SWQDLKD MR+AG+V F+ R + G+V++ SY D+K AI KL E
Sbjct: 116 SRVSWQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYSDLKNAIEKLSGKEI 168
>gi|224051266|ref|XP_002200500.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1
[Taeniopygia guttata]
Length = 264
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 86/174 (49%), Gaps = 21/174 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EFED RDA+DA+ Y
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAV-----Y 55
Query: 69 NFDGYRL---RVELAHGGRRHSSSMDRY-------SSYSSGGSRGVSRRSDYRVLVTGLP 118
DG L RV + H R S R++ R++V L
Sbjct: 56 ELDGKELCSERVTIEHARARSRGRGRGRYSDRFSSRRPRSDRRNAPPLRTENRLIVENLS 115
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
S SWQDLKD MR+AG+V F+ R + G+V++ SY D+K AI KL E
Sbjct: 116 SRVSWQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYSDLKNAIEKLSGKEI 168
>gi|426328680|ref|XP_004025378.1| PREDICTED: uncharacterized protein LOC101134512, partial [Gorilla
gorilla gorilla]
Length = 434
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 86/164 (52%), Gaps = 30/164 (18%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 2 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 56
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
+ G R+ VE A G RR S Y S S S+G+ L D
Sbjct: 57 DLCGERVIVEHARGPRRDGS----YGSGRSKHSKGIL--------------------LSD 92
Query: 129 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
+MR+AG+V ++ + R G++++ SY DMK A+ KLD +E
Sbjct: 93 YMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEKLDGTEV 135
>gi|410897813|ref|XP_003962393.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Takifugu
rubripes]
Length = 288
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 88/175 (50%), Gaps = 17/175 (9%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G+L R R+VE F YG I +I+LK G+ F+EF+D+RDA+DA+ +G
Sbjct: 6 VFIGHLSPHARERDVEKFFKGYGRIREINLK-----NGFGFVEFDDHRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSR-----------RSDYRVLVTGL 117
R+ +E A R GG G R+++R++V L
Sbjct: 61 ELCSERVTIEHARSRRGRGGGPGMGRFGGGGGGGGGGGGGGGYRYGPPVRTEHRLIVENL 120
Query: 118 PSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
S SWQDLKD MR+AG+V F R G+V++ S DMK AI K D +E
Sbjct: 121 SSRISWQDLKDMMRKAGEVTFVDAHRPNKN-EGVVEFASRSDMKSAISKFDGTEL 174
>gi|393912529|gb|EFO18201.2| Sfrs5 protein [Loa loa]
Length = 287
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 92/175 (52%), Gaps = 10/175 (5%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS+ S+R +YVG L R++E F YG I DI LK G+ F+EF+D RDA+D
Sbjct: 1 MSNMSAR-VYVGRLSYRASERDIEHFFRGYGRIRDIVLK-----NGFGFVEFDDPRDADD 54
Query: 61 AIRGRDGYNFDGYRLRVELAHGG---RRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGL 117
A+ +G G R+ +E + G R DR+ G +++ YR++V L
Sbjct: 55 AVYELNGKELCGERVILEFSRRGPRSRMGFGGFDRFPPPRRESRYGPPQQTRYRLIVENL 114
Query: 118 PSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
S SWQDLKD MR AG+V F+ + GIV + + DD++ A+ KL E
Sbjct: 115 SSRCSWQDLKDIMRTAGEVTFADAHKQHPN-EGIVCFLTRDDLERALDKLQGKEV 168
>gi|160333128|ref|NP_001026368.2| splicing factor, arginine/serine-rich 5 [Gallus gallus]
Length = 264
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 86/174 (49%), Gaps = 21/174 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EFED RDA+DA+ Y
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAV-----Y 55
Query: 69 NFDGYRL---RVELAHGGRRHSSSMDRY-------SSYSSGGSRGVSRRSDYRVLVTGLP 118
DG L RV + H R S R++ R++V L
Sbjct: 56 ELDGKELCSERVTIEHARARSRGRGRGRYSDRFSSRRPRSDRRSAPPLRTENRLIVENLS 115
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
S SWQDLKD MR+AG+V F+ R + G+V++ SY D+K AI KL E
Sbjct: 116 SRVSWQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYSDLKNAIEKLSGKEI 168
>gi|310798588|gb|EFQ33481.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 312
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 121/247 (48%), Gaps = 20/247 (8%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP + +VE F +G I +I L G+ F+E++D DA
Sbjct: 1 MTEVSSTRLYLGNLPRNATKADVEAHFATHGTGEITEIKLMN-----GFGFIEYKDAMDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLP 118
D + DG +F G RL V+ A G R +++ + RR+ +R+ +TGLP
Sbjct: 56 RDVVP--DGSDFMGERLTVQFARGTRHREGGS--APGFNNERAPPRPRRTPHRMQITGLP 111
Query: 119 SSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFS 177
+ SWQDLKD R++ DV +S+ RD G G V++ + D++ A+ KLD EF+ +
Sbjct: 112 TDTSWQDLKDFARQSSLDVVYSETGRD-GNGRGFVEFETAADLRTAVEKLDGREFKGSRV 170
Query: 178 RSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPY--YSRSRSPSRSWSYSPRSRSYSPRG 235
+ R + SRSP R P Y R R P R YSPR Y R
Sbjct: 171 ICVADTQPDMPPRDLRGARSRSPGGGRRPYPPPVDDYDR-RGPPR--GYSPRRDGY--RD 225
Query: 236 KYSRRSP 242
Y RSP
Sbjct: 226 GYRERSP 232
>gi|363742346|ref|XP_417747.3| PREDICTED: serine/arginine-rich splicing factor 4 [Gallus gallus]
Length = 214
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 77/129 (59%), Gaps = 13/129 (10%)
Query: 47 YAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS---SSMDRYSSYSSGGSRG 103
Y F+EF+D RDA+DA+ +G + G R+ VE A G R + S D+Y G
Sbjct: 4 YGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRGYGYRRSGRDKY---------G 54
Query: 104 VSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYA 163
R++YR++V L S SWQDLKD+MR+AG+V ++ + R G++++ SY DMK A
Sbjct: 55 PPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKN-EGVIEFKSYSDMKRA 113
Query: 164 IRKLDRSEF 172
+ KLD +E
Sbjct: 114 LEKLDGTEV 122
>gi|225717806|gb|ACO14749.1| Serine-arginine protein 55 [Caligus clemensi]
Length = 189
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 85/172 (49%), Gaps = 27/172 (15%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP + R R+VE F +YG I ++ +K GY F+EF+D RDA+D + DG
Sbjct: 7 VYVGNLPENVRERDVEKFFKEYGRIREVVIK-----SGYGFVEFDDPRDADDVVNDMDGK 61
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSR---------------------R 107
F G R+RVE+A R S GS S +
Sbjct: 62 EFQGGRVRVEMARDPRDRRGRDRGSDRGSDRGSDRGSDRRSSYDRRDSGRGRRGNPPGPK 121
Query: 108 SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDD 159
++YR+ V L S SWQDLKD+ R AGD+ ++ R G G+V++ S D
Sbjct: 122 TNYRITVQNLSSRTSWQDLKDYFRAAGDITYTNAHTPRQG-EGVVEFASSQD 172
>gi|226467225|emb|CAX76093.1| Splicing factor, arginine/serine-rich 4 [Schistosoma japonicum]
Length = 372
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 85/175 (48%), Gaps = 17/175 (9%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG +P R++E F YG + DI LK GY F+EF++ +DA+DA+ G
Sbjct: 4 VYVGRIPPRCTERDIERFFKGYGRLRDIVLK-----NGYGFVEFDNEKDADDAVYDLHGR 58
Query: 69 NFDGYRLRVELA-----------HGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGL 117
+ G RL VE A G G R++YRV+V L
Sbjct: 59 DLRGERLIVEHARLPPGTRGGSRRAGGGGGGGGGGGGGSGRDRRYGPPTRTEYRVIVENL 118
Query: 118 PSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
S SWQ+LKD MR+AG+V ++ + GIV++ +Y DMK AI K D E
Sbjct: 119 SSRVSWQELKDLMRKAGEVTYADAHKS-AKNDGIVEFAAYADMKEAIEKFDGYEL 172
>gi|299753075|ref|XP_001833047.2| hypothetical protein CC1G_01109 [Coprinopsis cinerea okayama7#130]
gi|298410132|gb|EAU88736.2| hypothetical protein CC1G_01109 [Coprinopsis cinerea okayama7#130]
Length = 279
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 83/176 (47%), Gaps = 17/176 (9%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
SR LY+G LP D R +V F YG I+D + G+ F+EFE +DAEDA+
Sbjct: 2 SRRLYLGRLPPDARSDDVSKFFEGYGRIIDCRVMT-----GFGFVEFESSKDAEDAVHQF 56
Query: 66 DGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQD 125
+G F G + VE A R R R R++V+G+ SWQD
Sbjct: 57 NGKPFMGTAIVVEFAKESRPRREVAPR-----------ARRPPGVRLIVSGISRDTSWQD 105
Query: 126 LKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYV 181
LKD R V F+ + RD G G+++Y S +D A++ LD E R R +
Sbjct: 106 LKDFGREVASVSFADIDRDVPGQ-GVLEYLSREDADRAVKDLDGRELRGKLVRVVL 160
>gi|225711268|gb|ACO11480.1| Serine-arginine protein 55 [Caligus rogercresseyi]
Length = 197
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 88/170 (51%), Gaps = 12/170 (7%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP D EV ++F KY D+ LK +AF+EF+ RDA+ A+ DG
Sbjct: 19 VYVGGLPSDVTTSEVGEIFAKYRNRFDVVLK-----TRFAFVEFDHNRDADHALERLDGT 73
Query: 69 NFDGYRLRVELAHGGRRHSS-----SMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSAS 122
F G R+ VE+A G + MDR + ++ + G + Y++++ L +
Sbjct: 74 LFRGQRIVVEIARGPKTADKYLFRGGMDREPTQATWVQKYGAPEITQYKLIIRNLSTRIE 133
Query: 123 WQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
WQDLKD MR+AG V ++QV R+ GIV + + DM AI D E
Sbjct: 134 WQDLKDLMRKAGRVTYAQVHRN-NLREGIVCFENKHDMLRAIDIFDDYEL 182
>gi|341888855|gb|EGT44790.1| CBN-RSP-2 protein [Caenorhabditis brenneri]
gi|341896980|gb|EGT52915.1| hypothetical protein CAEBREN_32319 [Caenorhabditis brenneri]
Length = 283
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 94/177 (53%), Gaps = 19/177 (10%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G LP R+VE F YG +VD+ +K G+ F++F+D RDA+DA+ +G
Sbjct: 4 VYIGRLPNRATDRDVEHFFRGYGKLVDVIMK-----NGFGFVDFQDQRDADDAVHDLNGK 58
Query: 69 NFDGYRLRVELA------HGGRRHSSSMDRYSSYSSGGSRGVSRR------SDYRVLVTG 116
+ G R+ +E + R S R ++ GG R S R + +R+++
Sbjct: 59 DLCGERVILEFPRRKVGYNEERSGSGYRGREPTFRRGGERQFSNRYSRPCSTRFRLVIDN 118
Query: 117 LPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
L + SWQD+KDH+R+ G + +S+ + R +V ++++DD++ A+ KL E
Sbjct: 119 LSTRFSWQDIKDHIRKLGIEPTYSEAHK-RNVNQALVCFSTHDDLREAMNKLQGEEL 174
>gi|348515953|ref|XP_003445504.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 1
[Oreochromis niloticus]
Length = 295
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 88/181 (48%), Gaps = 23/181 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R R+VE F YG I +I+LK G+ F+EF+D+RDA+DA+ +G
Sbjct: 6 VFIGRLSPHARERDVEKFFKGYGRIREINLK-----NGFGFVEFDDHRDADDAVYELNGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSR-----------------RSDYR 111
R+ +E A R GG G R+D+R
Sbjct: 61 ELCSERVTIEHARSRRGRGGGPGMGRFGGGGGGGGGGGGYRQSRSSGSSRYGPPVRTDHR 120
Query: 112 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSE 171
++V L S SWQDLKD MR+AG+V F R G+V++ S DMK AI KLD +E
Sbjct: 121 LVVENLSSRTSWQDLKDLMRKAGEVTFVDAHRPTKN-EGVVEFASRSDMKNAISKLDGTE 179
Query: 172 F 172
Sbjct: 180 L 180
>gi|226471686|emb|CAX70924.1| Splicing factor, arginine/serine-rich 4 [Schistosoma japonicum]
Length = 371
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 84/174 (48%), Gaps = 16/174 (9%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG +P R++E F YG + DI LK GY F+EF++ +DA+DA+ G
Sbjct: 4 VYVGRIPPRCTERDIERFFKGYGRLRDIVLK-----NGYGFVEFDNEKDADDAVYDLHGR 58
Query: 69 NFDGYRLRVELA----------HGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLP 118
+ G RL VE A S G R++YRV+V L
Sbjct: 59 DLRGERLIVEHARLPPGTRGGSRRAGGGGGGGGGGGGGSGRDRYGPPTRTEYRVIVENLS 118
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
S SWQDLKD R+AG+V ++ + GIV++ +Y DMK AI K D E
Sbjct: 119 SRVSWQDLKDLTRKAGEVTYADAHKS-AKNDGIVEFAAYADMKEAIEKFDGYEL 171
>gi|159163527|pdb|1X4C|A Chain A, Solution Structure Of Rrm Domain In Splicing Factor 2
Length = 108
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 57/75 (76%), Gaps = 4/75 (5%)
Query: 111 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRS 170
RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD TG+V++ +DM YA+RKLD +
Sbjct: 17 RVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNT 73
Query: 171 EFR-NAFSRSYVRVR 184
+FR + +Y+RV+
Sbjct: 74 KFRSHEGETAYIRVK 88
>gi|313227227|emb|CBY22374.1| unnamed protein product [Oikopleura dioica]
Length = 263
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 86/196 (43%), Gaps = 44/196 (22%)
Query: 4 RSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIR 63
R LY+G LP RM +VE+ F +G I I+LK PGY F+ FED RDAE+A R
Sbjct: 3 REEAQLYIGYLPNQARMSDVEEFFKGFGHIKSINLK-----PGYGFVVFEDKRDAEEAAR 57
Query: 64 GRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSR----------------- 106
DG G ++ VE+A G S YS G R + R
Sbjct: 58 DLDGKRMCGEKVDVEMAKGPGNKSR-----KEYSRSGDRPIVRDTRSGFNGRRRSRSRDR 112
Query: 107 ----------RSDYRVLVTGLPSSASWQDLKDHMRRAG----DVCFSQVFRDRGGMTGIV 152
R D + +T L + SWQDLKD +R D C + + DR V
Sbjct: 113 GFSSRKKEPYRDDATISITNLSTRCSWQDLKDFIRDNARVEPDFCDAHKYEDR---IATV 169
Query: 153 DYTSYDDMKYAIRKLD 168
+ S DM+ A+ ++D
Sbjct: 170 SFRSSSDMRKAVDRMD 185
>gi|443899862|dbj|GAC77190.1| alternative splicing factor SRp55/B52/SRp75 [Pseudozyma antarctica
T-34]
Length = 260
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 92/191 (48%), Gaps = 28/191 (14%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS+R +YVG LP D R +++DLF YG + D+ + + F+EFE RDAED
Sbjct: 1 MSTR----VYVGKLPPDVRRGDIDDLFRDYGRLQDVRIMG-----SFGFVEFEHPRDAED 51
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSS----SMDRYSSYSSGGSRGVSRR--------- 107
A++ DG NF G R+ V+ A G R D Y R R
Sbjct: 52 AVKDFDGRNFMGERIVVQHAKSGERRREPAGYGADPYDRRGGPPGREPPSRYGAPPPRRE 111
Query: 108 -----SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 162
+R +V+ LP + SWQDLKD R G + F+ V R G+++Y + DD +
Sbjct: 112 PRIRRGQFRCIVSNLPPNTSWQDLKDIGREHGSISFADVDPSRPD-EGVIEYDNRDDYER 170
Query: 163 AIRKLDRSEFR 173
A+ K++ E R
Sbjct: 171 ALDKIEGIELR 181
>gi|449274700|gb|EMC83778.1| Splicing factor, arginine/serine-rich 5 [Columba livia]
Length = 265
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 86/174 (49%), Gaps = 21/174 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EF+D RDA+DA+ Y
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFDDPRDADDAV-----Y 55
Query: 69 NFDGYRL---RVELAHGGRRHSSSMDRY-------SSYSSGGSRGVSRRSDYRVLVTGLP 118
DG L RV + H R S R++ R++V L
Sbjct: 56 ELDGKELCSERVTIEHARARSRGRGRGRYSDRFSSRRPRSDRRSAPPLRTENRLIVENLS 115
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
S SWQDLKD MR+AG+V F+ R + G+V++ SY D+K AI KL E
Sbjct: 116 SRVSWQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYSDLKNAIEKLSGKEI 168
>gi|358387407|gb|EHK25002.1| hypothetical protein TRIVIDRAFT_145450 [Trichoderma virens Gv29-8]
Length = 311
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 96/182 (52%), Gaps = 13/182 (7%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M+ SS LY+GNLP +VE F +G ++K+ G+ F+E++D DA D
Sbjct: 1 MTEVSSTRLYLGNLPRHATKADVEAHFATHGTGEITEVKLMN---GFGFIEYKDAMDARD 57
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
+ DG +F G RL V+ A G R M + RR+ +R+ +TGLP+
Sbjct: 58 VVP--DGSDFMGERLTVQFARGTRHREGGMGHERAPPR------PRRTPHRMQITGLPND 109
Query: 121 ASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRS 179
SWQDLKD R++ DV +S+ RD G G V++ + D++ A+ KLD EF+ + +
Sbjct: 110 TSWQDLKDFARQSSLDVVYSETGRDSNG-RGFVEFETAADLRTAVEKLDGREFKGSRVQC 168
Query: 180 YV 181
V
Sbjct: 169 LV 170
>gi|149063568|gb|EDM13891.1| splicing factor, arginine/serine rich 9, isoform CRA_a [Rattus
norvegicus]
Length = 124
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 70/110 (63%), Gaps = 10/110 (9%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++EDLFYKYG I +I+LK +AF+ FED RDAEDAI GR+GY
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGYRLRVEL--AHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTG 116
++ RLRVE A+GGR R +RRSD+RVLV+G
Sbjct: 76 DYGQCRLRVEFPRAYGGRGGWPRASRNGP--------PTRRSDFRVLVSG 117
>gi|156098601|ref|XP_001615316.1| alternative splicing factor ASF-1 [Plasmodium vivax Sal-1]
gi|148804190|gb|EDL45589.1| alternative splicing factor ASF-1, putative [Plasmodium vivax]
Length = 208
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 95/201 (47%), Gaps = 33/201 (16%)
Query: 2 SSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPG--YAFLEFEDYRDAE 59
+ +S +YVGN+PG +E+ F ++G I +ID+K G YAF+E+E Y+ AE
Sbjct: 3 AGKSGHRIYVGNIPGSMSKQEIIKAFEEFGKITEIDIKYNRNTNGTNYAFIEYESYKSAE 62
Query: 60 DAIRGRDGYNFDGYRLRVE-------------LAHGGRRHSSSMDRYSSYSSGGSRGV-- 104
I ++G GY L+VE +A GGR + S G V
Sbjct: 63 KTIENKNGQKLKGYMLKVEYSIDKKNKEGGDLIALGGR---------EAVSKGLLTNVRL 113
Query: 105 -SRRSDYRVLVTGLPSSASWQD-LKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 162
RS YRV+V P D +K + +AG V ++Q+ + I +Y + M
Sbjct: 114 PKNRSHYRVVVKNFPRKKIKLDGIKTFLMKAGKVIYTQLEDE----ITIAEYDCREGMLR 169
Query: 163 AIRKLDRSEFRNAFSRSYVRV 183
A+ LDR+ F N+ + YVRV
Sbjct: 170 AVNTLDRTMF-NSTRKVYVRV 189
>gi|396459915|ref|XP_003834570.1| hypothetical protein LEMA_P062390.1 [Leptosphaeria maculans JN3]
gi|312211119|emb|CBX91205.1| hypothetical protein LEMA_P062390.1 [Leptosphaeria maculans JN3]
Length = 493
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 95/194 (48%), Gaps = 30/194 (15%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP +VE F +G I ++ L G+ F+E++D DA
Sbjct: 131 MTEVSSTRLYLGNLPRSATKADVEAHFQTHGTGEITEVKLMN-----GFGFIEYKDPMDA 185
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLP 118
D + G +F G RL V+ A G R + + + RR+ YR+ +T LP
Sbjct: 186 RDVVPAFHGSDFMGERLIVQFARGSRARNENFTPHERVPP-----RPRRTPYRMRITSLP 240
Query: 119 SSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGI-----------------VDYTSYDDM 160
SWQDLKD R++G DV +S+V R+R G + V+Y + D+
Sbjct: 241 VETSWQDLKDFARQSGLDVVYSEVGRERDGTGSVLYMSALARPRLTCACRFVEYETAADL 300
Query: 161 KYAIRKLDRSEFRN 174
K A+ KLDR EF+
Sbjct: 301 KAAVEKLDRREFKG 314
>gi|17535713|ref|NP_496441.1| Protein RSP-2 [Caenorhabditis elegans]
gi|56749459|sp|Q23120.1|RSP2_CAEEL RecName: Full=Probable splicing factor, arginine/serine-rich 2;
AltName: Full=CeSRp40; AltName: Full=RNA-binding protein
srp-4
gi|3880428|emb|CAA91394.1| Protein RSP-2 [Caenorhabditis elegans]
Length = 281
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 91/172 (52%), Gaps = 19/172 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G LP R+VE F YG + D+ +K G+ F++F+D RDA+DA+ +G
Sbjct: 4 VYIGRLPNRASDRDVEHFFRGYGKLSDVIMK-----NGFGFVDFQDQRDADDAVHDLNGK 58
Query: 69 NFDGYRLRVELA------HGGRRHSSSMDRYSSYSSGGSRGVSRR------SDYRVLVTG 116
G R+ +E + R S R ++ GG R S R + +R+++
Sbjct: 59 ELCGERVILEFPRRKVGYNEERSGSGFRGREPTFRKGGERQFSNRYSRPCSTRFRLVIDN 118
Query: 117 LPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKL 167
L + SWQD+KDH+R+ G + +S+ + R IV +TS+DD++ A+ KL
Sbjct: 119 LSTRYSWQDIKDHIRKLGIEPTYSEAHK-RNVNQAIVCFTSHDDLRDAMNKL 169
>gi|261194216|ref|XP_002623513.1| pre-RNA splicing factor Srp2 [Ajellomyces dermatitidis SLH14081]
gi|239588527|gb|EEQ71170.1| pre-RNA splicing factor Srp2 [Ajellomyces dermatitidis SLH14081]
Length = 258
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 106/211 (50%), Gaps = 30/211 (14%)
Query: 46 GYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVS 105
G+ F+E+ED DA+D + DG +F G RL V+ A G R + +S S S
Sbjct: 3 GFGFIEYEDAMDAKDVVP--DGTDFKGERLTVQFARGPRHKET----FSGPSDRSSAPRP 56
Query: 106 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 164
RR+ YR+ ++GLP + SWQDLKD R++G DV +S+ D G V++ + D+K A+
Sbjct: 57 RRTIYRMQISGLPET-SWQDLKDFARQSGLDVVYSETGHD---GRGFVEFETGSDLKTAV 112
Query: 165 RKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSR----SPYYSRSRSPSR 220
KLD EF+ + ++ + R+ SR PY SRS R PY R +
Sbjct: 113 EKLDGREFKGSRVLCTQDIQSLEDRQ------SRDPYRSRSPGRRGGYHPYDDYDRRGAP 166
Query: 221 SWSYSPRS---------RSYSPRGKYSRRSP 242
YSPR+ R Y R Y RR+P
Sbjct: 167 RGGYSPRNHYRERSPGRRDYYDRDGYGRRTP 197
>gi|221042258|dbj|BAH12806.1| unnamed protein product [Homo sapiens]
Length = 143
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 61/90 (67%), Gaps = 5/90 (5%)
Query: 97 SSGGS-RGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYT 155
S GG RG + +D R+ V LP SWQDLKDHMR AGDVC++ V+RD TG+V++
Sbjct: 2 SGGGVIRGPAGNNDCRIYVGNLPPGGSWQDLKDHMREAGDVCYADVYRDG---TGVVEFV 58
Query: 156 SYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 184
+DM YA+RKLD ++FR + +Y+RV+
Sbjct: 59 RKEDMTYAVRKLDNTKFRSHEGETAYIRVK 88
>gi|432852804|ref|XP_004067393.1| PREDICTED: serine/arginine-rich splicing factor 9-like [Oryzias
latipes]
Length = 146
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 75/116 (64%), Gaps = 6/116 (5%)
Query: 106 RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIR 165
RR + V V GLP + SWQDLKDHMR AGDVCF+ V RD G+V++ +DM+YA+R
Sbjct: 6 RRREEDVGVPGLPPTGSWQDLKDHMREAGDVCFADVQRD---GEGVVEFLRREDMEYALR 62
Query: 166 KLDRSEFR-NAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSR 220
+LDR+EFR + SY+RV ++ R + S + SRS SR R P+Y+R P R
Sbjct: 63 RLDRTEFRSHQGETSYIRV--FEDRGATSWARSRSRSRSRGRYSPPFYNRGSPPPR 116
>gi|308510478|ref|XP_003117422.1| CRE-RSP-2 protein [Caenorhabditis remanei]
gi|308242336|gb|EFO86288.1| CRE-RSP-2 protein [Caenorhabditis remanei]
Length = 281
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 93/177 (52%), Gaps = 19/177 (10%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G LP R+VE F YG +VD+ +K G+ F++F+D RDA+DA+ +G
Sbjct: 4 VYIGRLPNRATDRDVEHFFRGYGKLVDVIMK-----NGFGFVDFQDQRDADDAVHDLNGK 58
Query: 69 NFDGYRLRVELA------HGGRRHSSSMDRYSSYSSGGSRGVSRR------SDYRVLVTG 116
+ G R+ +E + R R ++ GG R S R + +R++V
Sbjct: 59 DLCGERVILEFPRRKVGYNEERSGGGYRGREPTFRRGGERQFSNRYSRPCSTRFRLVVDN 118
Query: 117 LPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
L + SWQD+KDH+R+ G + +S+ + R +V ++++DD++ A+ KL E
Sbjct: 119 LSTRYSWQDIKDHIRKLGIEPTYSEAHK-RNVNQALVCFSTHDDLRDAMNKLQGEEL 174
>gi|19115482|ref|NP_594570.1| mRNA export factor Srp2 [Schizosaccharomyces pombe 972h-]
gi|26399937|sp|P78814.2|SRP2_SCHPO RecName: Full=Pre-mRNA-splicing factor srp2
gi|2749972|gb|AAC39357.1| putative pre-mRNA splicing factor [Schizosaccharomyces pombe]
gi|6013092|emb|CAB57400.1| mRNA export factor Srp2 [Schizosaccharomyces pombe]
Length = 365
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 80/160 (50%), Gaps = 10/160 (6%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
L+VG +P ++ D F YG I+D L G+ F+E ED RDA D + G
Sbjct: 6 LFVGRIPPQATREDMMDFFKGYGQILDCKLMN-----GFGFVEVEDARDARDIVNDFQGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
F G R+ VE A S+ RR+ +R++V L SWQDLKD
Sbjct: 61 EFMGSRIVVEPAR----GERRRRENFRESAASKYPRPRRTGFRLIVENLSEDVSWQDLKD 116
Query: 129 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLD 168
MR+AG+ F+ R+ G G+V++++ +DM+ A+ L+
Sbjct: 117 VMRKAGEPTFTDAHRENPG-AGVVEFSTEEDMRNALTSLN 155
>gi|124804016|ref|XP_001347876.1| alternative splicing factor ASF-1 [Plasmodium falciparum 3D7]
gi|23496128|gb|AAN35789.1| alternative splicing factor ASF-1 [Plasmodium falciparum 3D7]
Length = 200
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 97/177 (54%), Gaps = 23/177 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPG--YAFLEFEDYRDAEDAIRGRD 66
LYVGN+PG +E+ +F +YG I DID+K G YAF+E+E+ + AE I+ R+
Sbjct: 11 LYVGNIPGSATRQELIKIFEEYGKISDIDIKYNRNSNGTNYAFIEYENPKSAEKTIQKRN 70
Query: 67 GYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDL 126
G F GY L+VE + +++ D Y RS+YRV+V P ++++
Sbjct: 71 GKKFKGYMLKVEYS-IEKKNRDLNDIY-------------RSEYRVVVKHFPR--FFKNI 114
Query: 127 KDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRV 183
K+ + RAG V + + +D G + I +Y + M AI LDR+ + N+ + YVRV
Sbjct: 115 KEFLSRAGKVLY--IHKDNGLI--IAEYEDKESMIKAISTLDRTIY-NSKRKVYVRV 166
>gi|327284522|ref|XP_003226986.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Anolis
carolinensis]
Length = 195
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 84/169 (49%), Gaps = 11/169 (6%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G+L R +E F YG IV++DLK GY FLEF D DA+DA+ +G
Sbjct: 4 VYIGHLSNQAHKRNMEP-FKGYGKIVEVDLK-----NGYGFLEFGDVCDADDAVHELNGK 57
Query: 69 NFDGYRLRVELAHGGR----RHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQ 124
+ G + VE G R S S G ++YR++ L +WQ
Sbjct: 58 DLCGDHVIVEHTWGPRCDSSYSSGRSGYGYRRSGRDKNGPPTHTEYRLIDENLTGCCNWQ 117
Query: 125 DLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
DLKD+M +AG+V ++ R G++++ SY DMK A+ LD +E
Sbjct: 118 DLKDYMHQAGEVTYADAHNGRKN-EGVIEFKSYSDMKRALENLDGTEVN 165
>gi|1749534|dbj|BAA13825.1| unnamed protein product [Schizosaccharomyces pombe]
Length = 361
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 80/160 (50%), Gaps = 10/160 (6%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
L+VG +P ++ D F YG I+D L G+ F+E ED RDA D + G
Sbjct: 2 LFVGRIPPQATREDMMDFFKGYGQILDCKLMN-----GFGFVEVEDARDARDIVNDFQGK 56
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
F G R+ VE A S+ RR+ +R++V L SWQDLKD
Sbjct: 57 EFMGSRIVVEPAR----GERRRRENFRESAASKYPRPRRTGFRLIVENLSEDVSWQDLKD 112
Query: 129 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLD 168
MR+AG+ F+ R+ G G+V++++ +DM+ A+ L+
Sbjct: 113 VMRKAGEPTFTDAHRENPG-AGVVEFSTEEDMRNALTSLN 151
>gi|254565225|ref|XP_002489723.1| RNA-binding protein that carries poly(A)+ mRNA from the nucleus
into the cytoplasm [Komagataella pastoris GS115]
gi|238029519|emb|CAY67442.1| RNA-binding protein that carries poly(A)+ mRNA from the nucleus
into the cytoplasm [Komagataella pastoris GS115]
gi|328350141|emb|CCA36541.1| Polyadenylate-binding protein 1-like [Komagataella pastoris CBS
7435]
Length = 329
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 89/170 (52%), Gaps = 25/170 (14%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS S+ L+V LPGD R E++DLF K+GPI ++ + GYAF+E+E+ DA
Sbjct: 1 MSDLSTSQLFVRPLPGDVRPEELQDLFGKFGPIKEVKIMR-----GYAFVEYEEGADASA 55
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
A+ + F L++E A SY ++R + RV VT +P S
Sbjct: 56 ALENLNNTPFGDQDLQIEFAK----------EKPSY--------AKRGENRVKVTNIPES 97
Query: 121 ASWQDLKDHMRRAGDVC--FSQVFRDRGGMTGIVDYTSYDDMKYAIRKLD 168
+WQDLKD + + D+ F+++ R T +++ + ++++ A+ K++
Sbjct: 98 IAWQDLKDFIAKEIDILPTFARLNRHDEPPTATLEFNNREELEAAVEKIN 147
>gi|410904228|ref|XP_003965594.1| PREDICTED: serine/arginine-rich splicing factor 9-like [Takifugu
rubripes]
Length = 227
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 86/161 (53%), Gaps = 28/161 (17%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLK-----IPPRPPGYAFLEFEDYRDAEDAIR 63
+YVGNLP D + R++EDLFYKYG I +I+LK IP +AF+ FED RDA+DA+
Sbjct: 6 IYVGNLPMDVQERDIEDLFYKYGKIREIELKNNRGTIP-----FAFIRFEDPRDADDAVY 60
Query: 64 GRDGYNFDGYRLRVEL--AHGGRRHSSSMDRYSSYSSGGSRGV-----SRRSDYRVLVTG 116
GR+GY + +LRVE + G + GG +RRSD+RV+V+G
Sbjct: 61 GRNGYVYGDSKLRVEYPRSTGAKFGGMGGGGGGGGGGGGGPRGRFGPPTRRSDFRVIVSG 120
Query: 117 -----------LPSSASWQDLKDHMRRAGDVCFSQVFRDRG 146
+ +S + K+ + G+ F +VF +RG
Sbjct: 121 GLADKGTNTRHVYNSHGGLEYKEQVEDTGETAFIRVFEERG 161
>gi|209155162|gb|ACI33813.1| Splicing factor, arginine/serine-rich 5 [Salmo salar]
Length = 316
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 103/275 (37%), Positives = 134/275 (48%), Gaps = 39/275 (14%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VG L R ++VE F YG I DIDLK G+ F+EF+D RDAEDA+ Y
Sbjct: 6 IFVGRLNPSAREKDVERFFKGYGRIRDIDLKR-----GFGFVEFDDPRDAEDAV-----Y 55
Query: 69 NFDGYRL---RVELAHGGRRHSSSM------------------DRYS--SYSSGGSRGVS 105
DG L RV + H R DRY S S
Sbjct: 56 ELDGKELCNERVTIEHARVRLRGGRGRGGDRGGGGGGGGGRFPDRYGRGSQDSRSRNPPP 115
Query: 106 RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIR 165
R++ R++V L S SWQDLKD MR+AG+V F+ R + G+V++ SY D+K A+
Sbjct: 116 MRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYSDLKNALE 174
Query: 166 KLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYS 225
KL E R + R S SRS S S SRSRSR+ SRSR+P RS S+S
Sbjct: 175 KLSGKEIN---GRKIKLIEAAKKRGSRSRSRSESSSRSRSRSRNRSPSRSRTPRRSRSHS 231
Query: 226 PRSRSYSPRGKYSRRSPSLSPARSASQRSPSGSPP 260
P+SR SP+ Y+R A + + GSPP
Sbjct: 232 PKSR--SPKRDYNRSHSRSHSGSPAPRGAAPGSPP 264
>gi|389640647|ref|XP_003717956.1| hypothetical protein MGG_11457 [Magnaporthe oryzae 70-15]
gi|351640509|gb|EHA48372.1| hypothetical protein MGG_11457 [Magnaporthe oryzae 70-15]
Length = 331
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 91/195 (46%), Gaps = 17/195 (8%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLF--YKYGPIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP +V F + G I +I L G+ F+E++D DA
Sbjct: 1 MTEVSSTRLYLGNLPRSATKEDVSTHFSSHGTGKITEIKLMN-----GFGFIEYDDPLDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVS--------RRSDY 110
D + G F G RL V+ A G R GG G RR+ +
Sbjct: 56 RDVVPAFHGSTFMGERLTVQFARGTRNREGGSGGGGGGGGGGGGGYGGERSGPRPRRTAF 115
Query: 111 RVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDR 169
R+ ++GLP SWQDLKD R++ DV +S+ R+ G G V++ + D+ A+ LD
Sbjct: 116 RMQISGLPVDTSWQDLKDFARQSQLDVVYSETGRNNNG-EGFVEFETAADLASAVEALDG 174
Query: 170 SEFRNAFSRSYVRVR 184
EF++ R +
Sbjct: 175 KEFKDKIVRCVANTQ 189
>gi|196007380|ref|XP_002113556.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190583960|gb|EDV24030.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 263
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 86/179 (48%), Gaps = 20/179 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG + ++ LK + F+EF+D RDAEDA+ +
Sbjct: 4 VYLGRLNSSVRERDVEKFFRDYGKLKEVTLK-----GTFGFVEFDDSRDAEDAVYDLNNK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSR--------------RSDYRVLV 114
G R+ VE A R D S GG R+DYR+ +
Sbjct: 59 ELCGDRIIVEFARNRREARGRGDDRYGRSRGGRSSGGGGGGGPAAGYGSAPVRTDYRLYI 118
Query: 115 TGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM-TGIVDYTSYDDMKYAIRKLDRSEF 172
L S SWQDLKD++R D+ S + + IV++ S DD++YAI+KLD +E
Sbjct: 119 NNLSSRVSWQDLKDYIRNKTDISVSYADAHKQSVGQAIVEFDSKDDLRYAIKKLDNTEI 177
>gi|355721871|gb|AES07404.1| splicing factor SRp55-1 [Mustela putorius furo]
Length = 250
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 77/136 (56%), Gaps = 11/136 (8%)
Query: 47 YAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRH---------SSSMDRYSSYS 97
Y F+EFED RDA+DA+ +G G R+ VE A G RR S +
Sbjct: 1 YGFVEFEDSRDADDAVYELNGKELCGERVIVEHARGPRRDRDGYSYGSRXGGGGYSSRRT 60
Query: 98 SGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTS 156
SG + G R+++R++V L S SWQDLKD MR+AG+V ++ ++R G++++ S
Sbjct: 61 SGRDKYGPPVRTEFRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRS 119
Query: 157 YDDMKYAIRKLDRSEF 172
Y DMK A+ KLD +E
Sbjct: 120 YSDMKRALDKLDGTEI 135
>gi|391343504|ref|XP_003746049.1| PREDICTED: serine-arginine protein 55-like [Metaseiulus
occidentalis]
Length = 296
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 83/164 (50%), Gaps = 7/164 (4%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G LP +R +++E F + G I I LK GYAF++F RDA DA+ +G
Sbjct: 6 VFIGRLPRGSREQDIEKFFSRCGRIRGIMLK-----RGYAFVDFRTDRDASDAVHDMNGR 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
+ G R+ VE+A G +R S ++ S S+ S +Y+++V L S SW+D KD
Sbjct: 61 SMRGERMTVEIASGRQRKGSRDQKHRSSSARND--ASSNGEYQIVVENLSSRISWKDFKD 118
Query: 129 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
+RR GIV + ++ D+K AI+K E
Sbjct: 119 MIRREDIEVVHVDAHKLHKHQGIVKFRTHSDLKRAIKKFQNREI 162
>gi|55824572|gb|AAV66406.1| splicing factor arginine/serine-rich protein 5 [Macaca
fascicularis]
Length = 208
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 81/149 (54%), Gaps = 12/149 (8%)
Query: 30 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 89
YG I DIDLK G+ F+EFED RDA+DA+ DG R+ +E A R
Sbjct: 3 YGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGKELCSERVTIEHARARSRGGRG 57
Query: 90 MDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFR 143
RYS +SS R R R++ R++V L S SWQDLKD MR+AG+V F+ R
Sbjct: 58 RGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR 117
Query: 144 DRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
+ G+V++ SY D+K AI KL E
Sbjct: 118 PKLN-EGVVEFASYGDLKNAIEKLSGKEI 145
>gi|389640645|ref|XP_003717955.1| hypothetical protein, variant [Magnaporthe oryzae 70-15]
gi|351640508|gb|EHA48371.1| hypothetical protein, variant [Magnaporthe oryzae 70-15]
Length = 330
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 92/195 (47%), Gaps = 19/195 (9%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLF--YKYGPIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP +V F + G I +I L G+ F+E++D DA
Sbjct: 1 MTEVSSTRLYLGNLPRSATKEDVSTHFSSHGTGKITEIKLMN-----GFGFIEYDDPLDA 55
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVS--------RRSDY 110
D + DG F G RL V+ A G R GG G RR+ +
Sbjct: 56 RDVVP--DGSTFMGERLTVQFARGTRNREGGSGGGGGGGGGGGGGYGGERSGPRPRRTAF 113
Query: 111 RVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDR 169
R+ ++GLP SWQDLKD R++ DV +S+ R+ G G V++ + D+ A+ LD
Sbjct: 114 RMQISGLPVDTSWQDLKDFARQSQLDVVYSETGRNNNG-EGFVEFETAADLASAVEALDG 172
Query: 170 SEFRNAFSRSYVRVR 184
EF++ R +
Sbjct: 173 KEFKDKIVRCVANTQ 187
>gi|406862976|gb|EKD16025.1| pre-mRNA splicing factor [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 326
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/234 (33%), Positives = 111/234 (47%), Gaps = 38/234 (16%)
Query: 22 EVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR--------DGYNFD 71
+VE F +G I +I L G+ F+E++D DA D + G G +F
Sbjct: 35 DVEAHFNTHGTGEITEIKLMN-----GFGFIEYKDAMDARDVVPGMTAQQLQAFHGSDFM 89
Query: 72 GYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMR 131
G RL V+ A G R + D +++ R RR+ +R+ ++GLP SWQDLKD R
Sbjct: 90 GERLTVQFARGTR----NRDTFAASERTAPR--PRRTPHRMQISGLPGETSWQDLKDFAR 143
Query: 132 RAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREY-DSR 189
++ DV +S+ RDR G V++ + D+K A+ KLD EF+ VRV D++
Sbjct: 144 QSSLDVVYSETGRDRDGKGSFVEFETALDLKTAVEKLDGREFKG------VRVTCIADTQ 197
Query: 190 RSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYSP-RGKYSRRSP 242
R R RSRSP R+ P SR YSP R Y RSP
Sbjct: 198 PDIPR--------DRGRSRSPIPRRAHLVDDYDRRGPPSRGYSPRRDTYRERSP 243
>gi|210075657|ref|XP_502448.2| YALI0D05547p [Yarrowia lipolytica]
gi|199425767|emb|CAG80636.2| YALI0D05547p [Yarrowia lipolytica CLIB122]
Length = 339
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 87/170 (51%), Gaps = 16/170 (9%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
L++ + DT ++EDLF +GPI ++ L Y F+EF+ +DAIR +D
Sbjct: 16 LFLRPIGPDTNKEQIEDLFSSHGPIKEVKLI-----KNYGFIEFDSL---DDAIRAKD-- 65
Query: 69 NFDGYRLRVE---LAHGGRRHSSSMDRYSSYSSGGSRGVSRRSD-YRVLVTGLPSSASWQ 124
N DG L E + Y + RG R+ D +RV ++GL SWQ
Sbjct: 66 NVDGQPLNGEPLFCTYANPIKVREPRTYRDRNDRNDRGGDRKEDIFRVNISGLAPGVSWQ 125
Query: 125 DLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
DLKD R A DV ++ V RDR G G V++ S D M+ A+ KLD +EF+
Sbjct: 126 DLKDFGRTADVDVTYTNVSRDREG-EGTVEFRSADQMEQAVSKLDGTEFK 174
>gi|221056122|ref|XP_002259199.1| RNA binding protein [Plasmodium knowlesi strain H]
gi|193809270|emb|CAQ39972.1| RNA binding protein, putative [Plasmodium knowlesi strain H]
Length = 206
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 93/189 (49%), Gaps = 12/189 (6%)
Query: 2 SSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPG--YAFLEFEDYRDAE 59
+ +S +YVGN+PG T E+ F ++G I ID+K G YAF+E+E+Y A+
Sbjct: 3 AEKSGYRVYVGNIPGSTTKEEIIKAFQEFGKITGIDIKYNRNANGTNYAFIEYENYESAK 62
Query: 60 DAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGG----SRGVSRRSDYRVLVT 115
++ ++G NF G L+VE + + + G R RS+YRV+V
Sbjct: 63 KTVQKKNGQNFMGNMLKVEYTNDKKNKEGHIIPVGKEKLKGFMRNLRLPRNRSNYRVVVK 122
Query: 116 GLPSSASWQD-LKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRN 174
P D +K + +AG V +Q+ + I +Y S + M A+ LDR+ + N
Sbjct: 123 NFPKRKIQLDYVKKFLMKAGKVIHTQLEDE----ITIAEYDSKEGMLRAVNTLDRTLYNN 178
Query: 175 AFSRSYVRV 183
S+ YVRV
Sbjct: 179 R-SKVYVRV 186
>gi|320589309|gb|EFX01771.1| pre-RNA splicing factor [Grosmannia clavigera kw1407]
Length = 398
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 109/256 (42%), Gaps = 52/256 (20%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
S+ LY+GNLP + +VE F K+G +D+K+ G+ F+E+ D DA D +
Sbjct: 22 SNTRLYLGNLPRNVTRSDVESHFNKHGTGEILDIKLMN---GFGFIEYRDAMDARDVVPA 78
Query: 65 RDGYNFDGYRLRVELAHGGR----------------------------------RHSSSM 90
G +F G RL V+ A G R
Sbjct: 79 FHGSDFMGERLTVQFARGRRGEGGGPGGGPGGGLGGGPNHGPGGGGLGHGPYGGGGGGGP 138
Query: 91 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMT 149
S RR+ +R+ +TGLP+ SWQDLKD RR+G +V FS+ +R G
Sbjct: 139 GGGGYNSHDRPPPRPRRTAHRMAITGLPNDTSWQDLKDFARRSGLEVVFSET--NRFG-D 195
Query: 150 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYS------ 203
G V++ S D+ AI KLD +EFR+ V V S S S S YS
Sbjct: 196 GSVEFESAQDLATAIEKLDNTEFRDKIVTCSVGVSLAVSDLSASASVCLLTMYSQVFTDM 255
Query: 204 -----RSRSRSPYYSR 214
R RSRSP+ R
Sbjct: 256 PPRDGRGRSRSPHPGR 271
>gi|299472989|emb|CBN77390.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 313
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 57/78 (73%), Gaps = 3/78 (3%)
Query: 106 RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIR 165
R+++YR +VTGLP SASWQDLKDHMR+AGDV ++ V +GG G+V + + + M YA+R
Sbjct: 190 RQTEYRAVVTGLPQSASWQDLKDHMRKAGDVNYADV-DHKGG--GVVHFNNKEGMDYALR 246
Query: 166 KLDRSEFRNAFSRSYVRV 183
KLD SEF N + + + V
Sbjct: 247 KLDGSEFSNRYDTATISV 264
>gi|324526478|gb|ADY48681.1| Splicing factor, arginine/serine-rich 6 [Ascaris suum]
Length = 158
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 60/95 (63%), Gaps = 9/95 (9%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP D +E+ED F+++G I + + RPPG+AF+EFED RDAEDA+R DG
Sbjct: 12 VYVGGLPNDATSQELEDAFHRFGRIRKV--WVARRPPGFAFIEFEDSRDAEDAVRALDGT 69
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRG 103
G R RVEL+HG RR+ + GGSRG
Sbjct: 70 RICGVRARVELSHGRRRNGAP-------DYGGSRG 97
>gi|392577928|gb|EIW71056.1| hypothetical protein TREMEDRAFT_56308 [Tremella mesenterica DSM
1558]
Length = 273
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 88/165 (53%), Gaps = 9/165 (5%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
S+R +Y+G+LP + +VED+F GPI+D+ + Y F+EFE RDAEDA+R
Sbjct: 2 SNRRVYIGHLPPNVTKTDVEDVFKGLGPILDVRIL-----GNYGFVEFESSRDAEDALRD 56
Query: 65 RDGYNFDGYRLRVELAHGGRRHS-SSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASW 123
+G + G + VE RR + RG RR R+ V G+P S SW
Sbjct: 57 YNGVSLLGENIIVEAPRERRRDAYGPGVGGYRGGDAPPRGPPRRG-VRINVVGIPGSTSW 115
Query: 124 QDLKDHMRRAGD-VCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKL 167
QDLKD+ R + V ++ V R G+ G+++Y + + + A+ +L
Sbjct: 116 QDLKDYGRLGSNMVTYADVDRYNPGV-GVIEYPTMGEAEEAMSRL 159
>gi|448111013|ref|XP_004201740.1| Piso0_001939 [Millerozyma farinosa CBS 7064]
gi|359464729|emb|CCE88434.1| Piso0_001939 [Millerozyma farinosa CBS 7064]
Length = 281
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 82/172 (47%), Gaps = 28/172 (16%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++V L D ++E F GPI D+ L G+AF+ FE DA+ A+ D
Sbjct: 7 IFVRPLGFDVEREKLEAHFQDIGPITDVQLM-----RGFAFVTFESEEDAKKAVETLDNS 61
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
FDG L++E A + + R +RV VT LP +WQD KD
Sbjct: 62 EFDGQPLQIEFAREKKEDT-------------------RGQFRVKVTNLPDGTAWQDFKD 102
Query: 129 HMRRAGDVC--FSQVFR--DRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAF 176
+R ++ F++VFR D G + G +++ S +++ A+ L+ SEF+ A
Sbjct: 103 FVRDKTELAPTFAKVFRNYDTGEVIGALEFASAEELAQAVPLLNESEFQEAI 154
>gi|315055555|ref|XP_003177152.1| hypothetical protein MGYG_01236 [Arthroderma gypseum CBS 118893]
gi|311338998|gb|EFQ98200.1| hypothetical protein MGYG_01236 [Arthroderma gypseum CBS 118893]
Length = 371
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 128/312 (41%), Gaps = 91/312 (29%)
Query: 1 MSSRSSRTLYVGNLPGDTRM-----------------REVEDLF--YKYGPIVDIDLKIP 41
MS SS LY+GNLP + + +++E+ F + G I +I L
Sbjct: 1 MSEVSSTRLYLGNLPRNGTLLVLLHPISVTVSPSFNKQDIEEHFGSHGTGKITEIKLMQ- 59
Query: 42 PRPPGYAFLEFEDYRDAEDAIRGR------------------------------------ 65
G+ F+E+ED DA+D + G
Sbjct: 60 ----GFGFIEYEDAMDAKDVVPGEGTSVVAFTFLDPFIFFPCLFFCLLFIFYPWNDALLI 115
Query: 66 --------------DGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYR 111
G +F G RL V+ A G RR + + RR+ YR
Sbjct: 116 LDPSSARFLLQLSVHGTDFKGERLTVQFARGPRRREP----FPGPPERSAAPRPRRTIYR 171
Query: 112 VLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRS 170
+ +TGLP + SWQDLKD R++G DV +S+ RDR G G V++ + +D++ A+ KLD +
Sbjct: 172 MQITGLPET-SWQDLKDFARQSGLDVVYSET-RDRDG-KGFVEFENGNDLRTAVEKLDGT 228
Query: 171 EFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRS 230
+F+ + ++ R R PY SRS R P Y P + R
Sbjct: 229 DFKGSRVTCTADIQPPMEDRV-----PRDPYRSRSPRRGPPYP----PVDDYDRRGPPRG 279
Query: 231 YSPRGKYSRRSP 242
YSPRG Y RSP
Sbjct: 280 YSPRGHYRERSP 291
>gi|448096991|ref|XP_004198563.1| Piso0_001939 [Millerozyma farinosa CBS 7064]
gi|359379985|emb|CCE82226.1| Piso0_001939 [Millerozyma farinosa CBS 7064]
Length = 280
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 82/172 (47%), Gaps = 28/172 (16%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++V L D ++E F GPI D+ L G+AF+ FE DA+ A+ D
Sbjct: 7 IFVRPLGFDVEREKLEAHFQDIGPITDVQLM-----RGFAFVTFESEEDAKKAVETLDNS 61
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
FDG L++E A + + R +RV VT LP +WQD KD
Sbjct: 62 EFDGQPLQIEFAREKKEDT-------------------RGQFRVKVTNLPDGTAWQDFKD 102
Query: 129 HMRRAGDVC--FSQVFR--DRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAF 176
+R ++ F++VFR D G + G +++ S +++ A+ L+ SEF+ A
Sbjct: 103 FVRDKTELAPTFAKVFRNYDTGEVIGALEFASAEELAQAVPLLNESEFQEAI 154
>gi|194376808|dbj|BAG57550.1| unnamed protein product [Homo sapiens]
Length = 125
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 69/109 (63%), Gaps = 6/109 (5%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP D R +++EDLFYKYG I +I+LK +AF+ FED RDAEDAI GR+GY
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGL 117
++ RLRVE + R G + +RRSD+RVLV+G+
Sbjct: 76 DYGQCRLRVEFPR------TYGGRGGWPRGGRNGPPTRRSDFRVLVSGM 118
>gi|241846316|ref|XP_002415562.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
gi|215509774|gb|EEC19227.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
Length = 355
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 94/183 (51%), Gaps = 28/183 (15%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G+L R R++E F +G I ++ LK G+ F+EF+D RDA+DA+ +G
Sbjct: 6 VYIGHLSYRVRERDLEKFFRGFGKIREVLLK-----NGFGFVEFDDDRDADDAVYELNGR 60
Query: 69 NFDGYRLRVELAHGGRR-----------------HSSSMDRYSSYSSGGSR--GVSRRSD 109
DG R L GRR H S+ R ++ G R+D
Sbjct: 61 ELDGERYFTTL---GRRAGSRNGTPRPGCAQLYGHVSNCFRLFGRATAPVNRYGPPTRTD 117
Query: 110 YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDR 169
YRV++ L S SWQDLKD MR+ GDV ++ R R G+V++ SY DM+ AI KLD
Sbjct: 118 YRVIIENLSSRISWQDLKDRMRQVGDVTYADAHR-RKRNEGVVEFASYSDMRRAIDKLDN 176
Query: 170 SEF 172
+E
Sbjct: 177 TEL 179
>gi|313212059|emb|CBY17785.1| unnamed protein product [Oikopleura dioica]
Length = 259
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 88/168 (52%), Gaps = 12/168 (7%)
Query: 8 TLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDG 67
T+++G L R +++ED F KYG + I L+ Y F++F+D RDAEDAI+ DG
Sbjct: 6 TVFIGGLSDRARDKDIEDFFDKYGKVTQIRLR-----DRYGFVDFDDRRDAEDAIKDLDG 60
Query: 68 YNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVS-------RRSDYRVLVTGLPSS 120
+ G R+R+ELA+ R S R G G R+ + + V L S
Sbjct: 61 SSLCGERVRLELANRSRGSRRSGSRDRGRRGGDRGGDERRGSNRPHRTRFTLEVENLSSR 120
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLD 168
SW DLKD MR+AG+V ++ + G G V + + +D++ A +K D
Sbjct: 121 VSWADLKDMMRKAGEVTYTDAHQRMGKNRGEVCFANSEDLRAAYKKFD 168
>gi|89267363|emb|CAJ82789.1| splicing factor, arginine/serine-rich 5 [Xenopus (Silurana)
tropicalis]
Length = 234
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 83/155 (53%), Gaps = 21/155 (13%)
Query: 33 IVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM-- 90
I +I+LK G+ F+EF+D+RDA+DA+ +G R+ +E A R M
Sbjct: 2 IREINLK-----NGFGFVEFDDHRDADDAVYELNGKVLCNERVTIEHARNRRGRGGMMGG 56
Query: 91 ---------DRYS---SYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVC 137
+R++ S S G SR G R+++R++V L S SWQDLKD MR+AG+V
Sbjct: 57 GGGGGGRYPNRFAYRQSNSGGPSRYGPPVRTEHRIIVENLSSRVSWQDLKDFMRKAGEVT 116
Query: 138 FSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
+ R G+V++ SY DMK A+ KLD E
Sbjct: 117 YVDAHRSNRN-EGVVEFASYTDMKNALDKLDGVEL 150
>gi|156086366|ref|XP_001610592.1| RNA recognition motif containing protein [Babesia bovis T2Bo]
gi|154797845|gb|EDO07024.1| RNA recognition motif containing protein [Babesia bovis]
Length = 382
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 83/160 (51%), Gaps = 18/160 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VGNL G ++ + F K+GPI ID + +AF++F RDAE A+R +
Sbjct: 176 VFVGNLDGKVSEEDLTNAFSKFGPINKIDYRR-----NFAFVDFVKSRDAEVAMREMNER 230
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
G +L+V + H R S +R ++S + V L +SASWQDLKD
Sbjct: 231 VLLGTKLKV-VPHSERSKRSETNREPDFASQAT------------VLNLDNSASWQDLKD 277
Query: 129 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLD 168
R+AG+V ++ V G+V++TS MK A+ +L+
Sbjct: 278 FARQAGEVVYASVIIRDQKRYGLVEFTSPKTMKAAVEQLN 317
>gi|389583241|dbj|GAB65976.1| RNA binding protein [Plasmodium cynomolgi strain B]
Length = 728
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 92/173 (53%), Gaps = 14/173 (8%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VGN+ D R +V F KYG IV++ K +AF+E+E AE AI+ +G
Sbjct: 140 IFVGNISPDAREEDVRRKFLKYGDIVNMQWKTR-----FAFIEYEKISHAEIAIKEENGQ 194
Query: 69 NFDGYRLRVELAHGGRR-HSSSMDR------YS-SYSSGGSRGVSRRSDYRVLVTGLPSS 120
F G L V+ H G H+ + +R Y+ +YS + +++ R++V +
Sbjct: 195 FFFGEELNVQPHHAGNYFHNRNDNRGFYPPPYARNYSPNRNENREKKNALRIVVKNVDEK 254
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMT-GIVDYTSYDDMKYAIRKLDRSEF 172
ASWQDLKD R G V ++ + +D GI++Y +Y+++K A+ L+ +F
Sbjct: 255 ASWQDLKDFGRDVGSVNYANIIQDDNKERFGIIEYYNYENVKKAVEVLNGRKF 307
>gi|290562259|gb|ADD38526.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
Length = 195
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 86/162 (53%), Gaps = 12/162 (7%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP DT ++ D+F KY D+ LK +AF+EF+ +RDA+ A+ DG
Sbjct: 19 VYVGGLPTDTSRSDIRDIFSKYRDRFDMKLK-----TRFAFIEFDYHRDADHAVDNLDGL 73
Query: 69 NFDGYRLRVELAHGGR-----RHSSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSAS 122
F G R+ VE+A G R R ++ ++ R G + Y++LV L +
Sbjct: 74 TFRGRRISVEVARGPRTADKYRFKGGLNHEPVQATWVKRYGTPEITKYKILVKNLSTRIE 133
Query: 123 WQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 164
WQDLKD M++AG V ++ ++ G+V +++ + M AI
Sbjct: 134 WQDLKDLMKKAGTVTYALAHKN-NMHEGMVCFSNEEGMLKAI 174
>gi|47224367|emb|CAG09213.1| unnamed protein product [Tetraodon nigroviridis]
Length = 151
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 73/145 (50%), Gaps = 15/145 (10%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EF+D RDAEDA+ DG
Sbjct: 6 IFIGRLSPTAREKDVERFFKGYGRIRDIDLK-----KGFGFVEFDDPRDAEDAVYELDGK 60
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSS-----YSSGGSRGVSR-----RSDYRVLVTGLP 118
R+ +E A R Y G G SR R++ R++V L
Sbjct: 61 ELCNERVTIEHARVRLRGGRGRTWTGGRFSDRYGRGSQSGRSRNPPPVRTENRLIVENLS 120
Query: 119 SSASWQDLKDHMRRAGDVCFSQVFR 143
S SWQDLKD MR+AG+V F+ R
Sbjct: 121 SRVSWQDLKDFMRQAGEVTFADAHR 145
>gi|221055067|ref|XP_002258672.1| RNA binding protein [Plasmodium knowlesi strain H]
gi|193808742|emb|CAQ39444.1| RNA binding protein, putative [Plasmodium knowlesi strain H]
Length = 837
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 90/173 (52%), Gaps = 14/173 (8%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VGN+ + R +V F KYG IV++ K +AF+E+E AE AI+ +G
Sbjct: 311 IFVGNISPEAREEDVRRKFLKYGDIVNMQWKTR-----FAFIEYEKTSHAEIAIKEENGQ 365
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYS--------SYSSGGSRGVSRRSDYRVLVTGLPSS 120
F G L V+ H G ++ D + +YS + +++ R+++ +
Sbjct: 366 LFFGEELNVQPHHAGNYFNNRNDNRNYYPPTYGRNYSPNRNEIREKKNALRIVIRNVDEK 425
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMT-GIVDYTSYDDMKYAIRKLDRSEF 172
ASWQDLKD R G V ++ +F+D GI++Y +Y+++K A+ L+ +F
Sbjct: 426 ASWQDLKDFGRDIGSVNYANIFQDENKERFGIIEYYNYENVKKAVEVLNGRKF 478
>gi|255564609|ref|XP_002523299.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223537387|gb|EEF39015.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 259
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 106/224 (47%), Gaps = 31/224 (13%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
+R ++VGN +TR E+E LF KYG + +D+K G+AF+ FED RDA DAIRG
Sbjct: 2 ARPIFVGNFEFETRQSELERLFSKYGRVERVDMK-----SGFAFVYFEDERDAADAIRGL 56
Query: 66 DGYNF--DGYRLRVELAHGGR-RHSSSMDRYSSYSSGGSRGVSRRSDYRVL--VTGLPSS 120
D +F D +L VE A G R RH GSR ++ + + L + P
Sbjct: 57 DNISFGYDRRKLSVEWARGERGRHRD-----------GSRSMANQRPTKTLFVINFDPIH 105
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSY 180
+D+K H R G+V ++ R+ V + + +D A+ ++ +
Sbjct: 106 TRVEDIKRHFERYGEVLHVRIRRN----FAFVQFETQEDATKALECTHMTKILDRVVSVE 161
Query: 181 VRVREYDSRRSYSRSPSRSPYYSRS------RSRSPYYSRSRSP 218
+R+ R S SP R +Y RS R SP Y R+RSP
Sbjct: 162 YALRDDSERGDKSDSPRRGSHYGRSPSPVYRRRPSPDYGRARSP 205
>gi|449664983|ref|XP_002156792.2| PREDICTED: serine/arginine-rich splicing factor 4-like [Hydra
magnipapillata]
Length = 244
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 98/176 (55%), Gaps = 18/176 (10%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYG---PIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
L++G+L D R R++E F +G I ++ +K GY F+ F+D RDA+DAI
Sbjct: 6 LFIGHLSPDARTRDLERFFKDHGFSKTIQEVVVK-----TGYGFVVFDDRRDADDAIYEL 60
Query: 66 DGYNFDGYRLRVELAH-GGR--RHSSSMDRYSSYSSGGSRGVSRR------SDYRVLVTG 116
+G G RL+VE A GR ++ S G S R +D+R+++
Sbjct: 61 NGKELMGARLQVEYAKPSGRSDKYDGGYRDRERERSRDRGGFSSRYGRPYNTDFRLVIEN 120
Query: 117 LPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
+ + SWQD+KD+ R+AG+V F++ R++ G G+V++ S DMK A+RKLD SE
Sbjct: 121 VSTRCSWQDIKDYFRQAGEVTFAKCHREKMG-EGVVEFASSSDMKNALRKLDGSEL 175
>gi|399217969|emb|CCF74856.1| unnamed protein product [Babesia microti strain RI]
Length = 385
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 83/166 (50%), Gaps = 15/166 (9%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VGN+P DT + E++ +F K G +V D++ +AF+E+ A DA+ +GY
Sbjct: 175 VFVGNIPLDTTVDELKAVFEKCGELVKCDMR-----KRFAFIEYHKPESASDALNQLNGY 229
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
G +++V + HS + +RY + Y V V + + SWQDLKD
Sbjct: 230 ILHGEKIKV------KPHSDNSNRYREKVPPPRH----KPGYAVTVANIEETTSWQDLKD 279
Query: 129 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRN 174
R AG+V ++ + G G+++Y + + K A+ +L + N
Sbjct: 280 FGRLAGEVSYASIVIKDGKKYGVIEYLAPESAKNALVELQGKQITN 325
>gi|242023192|ref|XP_002432020.1| transformer-2 sex-determining protein, putative [Pediculus
humanus corporis]
gi|212517371|gb|EEB19282.1| transformer-2 sex-determining protein, putative [Pediculus
humanus corporis]
Length = 132
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 57/86 (66%), Gaps = 2/86 (2%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
S +YVGNL + E+E +F KYGP+ ++ + PPG+AF+EFED RDAEDA+RG
Sbjct: 10 SCKVYVGNLGNNGSKYELECIFSKYGPLRNV--WVARNPPGFAFIEFEDPRDAEDAVRGL 67
Query: 66 DGYNFDGYRLRVELAHGGRRHSSSMD 91
DG G R RVE++ G RH S+++
Sbjct: 68 DGSRMCGTRARVEMSSGRTRHRSALE 93
>gi|342876767|gb|EGU78325.1| hypothetical protein FOXB_11186 [Fusarium oxysporum Fo5176]
Length = 1835
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 83/155 (53%), Gaps = 14/155 (9%)
Query: 22 EVEDLFYKYG--PIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVEL 79
+VE F +G I ++ L G+ F+E++D DA D + G +F G RL V+
Sbjct: 1547 DVEAHFATHGTGEITEVKLM-----NGFGFIEYKDPMDARDVVPAFHGSDFMGERLTVQF 1601
Query: 80 AHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCF 138
A G R + ++ R RR+ +R+ +TGLP+ SWQDLKD R++ DV +
Sbjct: 1602 ARGSRHREGG---FGNHERTAPR--PRRTPHRMQITGLPNDTSWQDLKDFARQSSLDVVY 1656
Query: 139 SQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
S+ RD G G V++ + D++ A+ KLD EF+
Sbjct: 1657 SETGRDSNG-RGFVEFETAADLRTAVEKLDGREFK 1690
>gi|225712350|gb|ACO12021.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
gi|290463073|gb|ADD24584.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
Length = 195
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 85/162 (52%), Gaps = 12/162 (7%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP DT + D+F KY D+ LK +AF+EF+ +RDA+ A+ DG
Sbjct: 19 VYVGGLPTDTSRSGIRDIFSKYRDRFDMKLKTR-----FAFIEFDYHRDADHAVDNLDGL 73
Query: 69 NFDGYRLRVELAHGGR-----RHSSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSAS 122
F G R+ VE+A G R R ++ ++ R G + Y++LV L +
Sbjct: 74 TFRGRRISVEVARGPRTADKYRFKGGLNHEPVQATWVKRYGTPEITKYKILVKNLSTRIE 133
Query: 123 WQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 164
WQDLKD M++AG V ++ ++ G+V +++ + M AI
Sbjct: 134 WQDLKDLMKKAGTVTYALAHKN-NMHEGMVCFSNEEGMLKAI 174
>gi|432885940|ref|XP_004074826.1| PREDICTED: serine/arginine-rich splicing factor 9-like isoform 1
[Oryzias latipes]
Length = 117
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 68/110 (61%), Gaps = 4/110 (3%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+GNLP D + R++EDLF+KYG I +I+LK +AF+ FED RDA+DA+ GR+GY
Sbjct: 6 IYIGNLPIDVQERDIEDLFFKYGKIREIELKNNRGTIPFAFIRFEDPRDADDAVYGRNGY 65
Query: 69 NFDGYRLRVEL--AHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTG 116
+ +LRVE + GG+ G +RRS++RV+VTG
Sbjct: 66 VYGNSKLRVEYPRSTGGKPTPMGPGGAGPRGRFGPP--TRRSEFRVIVTG 113
>gi|238878201|gb|EEQ41839.1| predicted protein [Candida albicans WO-1]
Length = 331
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 84/173 (48%), Gaps = 28/173 (16%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
++ L+V L D EV+D F + P+V++ L GYAF+ FE+ DA+ A+
Sbjct: 53 TKQLFVRPLRNDVTREEVQDHFSRAAPVVEVRLM-----EGYAFVTFENEDDAKQALELL 107
Query: 66 DGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQD 125
+ F+G +L++E A R + R YR+L+T L +WQD
Sbjct: 108 NDAEFNGEKLQIEFAKERREDT-------------------RGKYRLLITNLAEGTAWQD 148
Query: 126 LKDHMRRAGDV--CFSQVFR--DRGGMTGIVDYTSYDDMKYAIRKLDRSEFRN 174
+KD +R D + +VF D G T + + S +D+ AI LD++ FR+
Sbjct: 149 IKDFVREKTDSQPSYVKVFTNFDNGETTCSMQFQSREDLDRAIPLLDKAVFRD 201
>gi|240848709|ref|NP_001155652.1| RNA-binding protein-like [Acyrthosiphon pisum]
gi|239788597|dbj|BAH70971.1| ACYPI006120 [Acyrthosiphon pisum]
Length = 135
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 52/76 (68%), Gaps = 2/76 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+GNL + E+EDLF KYGP+ +I I PPG+AF+E+ED RDAEDA+RG DG
Sbjct: 13 VYIGNLKSNANKYEIEDLFTKYGPLKNI--WIARNPPGFAFIEYEDPRDAEDAVRGLDGT 70
Query: 69 NFDGYRLRVELAHGGR 84
G R+ V+++ G R
Sbjct: 71 RCCGSRIIVQMSTGKR 86
>gi|148687918|gb|EDL19865.1| splicing factor, arginine/serine rich 9, isoform CRA_a [Mus
musculus]
Length = 184
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 55/77 (71%), Gaps = 4/77 (5%)
Query: 108 SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKL 167
+ + + GLP S SWQDLKDHMR AGDVC++ V +D GM G+V+Y +DM+YA+RKL
Sbjct: 72 AHFPFMTPGLPPSGSWQDLKDHMREAGDVCYADVQKD--GM-GMVEYLRKEDMEYALRKL 128
Query: 168 DRSEFR-NAFSRSYVRV 183
D ++FR + SY+RV
Sbjct: 129 DDTKFRSHEGETSYIRV 145
>gi|156096635|ref|XP_001614351.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148803225|gb|EDL44624.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 778
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 86/172 (50%), Gaps = 13/172 (7%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VGN+ + R +V F KYG IV++ K +AF+E+E AE AI+ +G
Sbjct: 227 IFVGNISPEAREEDVRRKFLKYGDIVNMQWKTR-----FAFIEYEKTSHAEIAIKEENGQ 281
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYS-------SYSSGGSRGVSRRSDYRVLVTGLPSSA 121
F G L V+ H G + D S +YS + +++ R++V + A
Sbjct: 282 FFFGEELNVQPHHAGNYFHNRSDNRSFYPPYGRTYSPNRNESREKKNALRIVVKNIDEKA 341
Query: 122 SWQDLKDHMRRAGDVCFSQVFRDRGGMT-GIVDYTSYDDMKYAIRKLDRSEF 172
SWQDLKD R G V ++ + +D GI++Y + + +K A+ L+ +F
Sbjct: 342 SWQDLKDFGRDVGSVNYANIIQDDNKERFGIIEYYNSETVKKAVEVLNGRKF 393
>gi|241950483|ref|XP_002417964.1| conserved hypothetical protein [Candida dubliniensis CD36]
gi|223641302|emb|CAX45682.1| conserved hypothetical protein [Candida dubliniensis CD36]
Length = 291
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 85/175 (48%), Gaps = 28/175 (16%)
Query: 4 RSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIR 63
+++ L+V L D EV+D F + P+V++ L GYAF+ FE+ D++ A+
Sbjct: 6 EATKQLFVRPLRNDVTREEVQDHFSRAAPVVEVRLM-----EGYAFVTFENEDDSKQALE 60
Query: 64 GRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASW 123
+ F+G +L++E A R + R YR+L+T L +W
Sbjct: 61 LLNDAEFNGEKLQIEFAKEKREDT-------------------RGKYRLLITNLAEGTAW 101
Query: 124 QDLKDHMRRAGDV--CFSQVFR--DRGGMTGIVDYTSYDDMKYAIRKLDRSEFRN 174
QD+KD +R D + +VF D G T + + S +D+ AI LD++ FR+
Sbjct: 102 QDIKDFVREKTDSQPSYVKVFTNYDNGETTCSMQFQSREDLDRAIPLLDKAVFRD 156
>gi|225713170|gb|ACO12431.1| Splicing factor, arginine/serine-rich 4 [Lepeophtheirus salmonis]
Length = 129
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 68/125 (54%), Gaps = 16/125 (12%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
LY+GN+ DTR R+VE F YG + ++ LK GY F+EFED+RDA+DA++ DG
Sbjct: 8 LYLGNISDDTRERDVEKFFKGYGKLREVALK-----NGYGFVEFEDHRDADDAVQDLDGK 62
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV---------SRRSDYRVLVTGLPS 119
+ +G R+RVE A R +S RY S S RR+ YR+ V L +
Sbjct: 63 DMNGSRVRVEFARSPREKRNS--RYQSRRSPPRGRRGPPMKRNPPGRRTQYRIRVENLST 120
Query: 120 SASWQ 124
SWQ
Sbjct: 121 RTSWQ 125
>gi|68482041|ref|XP_715038.1| hypothetical protein CaO19.7238 [Candida albicans SC5314]
gi|46436641|gb|EAK96000.1| hypothetical protein CaO19.7238 [Candida albicans SC5314]
Length = 286
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 84/173 (48%), Gaps = 28/173 (16%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
++ L+V L D EV+D F + P+V++ L GYAF+ FE+ DA+ A+
Sbjct: 8 TKQLFVRPLRNDVTREEVQDHFSRAAPVVEVRLM-----EGYAFVTFENEDDAKQALELL 62
Query: 66 DGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQD 125
+ F+G +L++E A R + R YR+L+T L +WQD
Sbjct: 63 NDAEFNGEKLQIEFAKERREDT-------------------RGKYRLLITNLAEGTAWQD 103
Query: 126 LKDHMRRAGDV--CFSQVFR--DRGGMTGIVDYTSYDDMKYAIRKLDRSEFRN 174
+KD +R D + +VF D G T + + S +D+ AI LD++ FR+
Sbjct: 104 IKDFVREKTDSQPSYVKVFTNFDNGETTCSMQFQSREDLDRAIPLLDKAVFRD 156
>gi|391339441|ref|XP_003744058.1| PREDICTED: uncharacterized protein LOC100905097 [Metaseiulus
occidentalis]
Length = 355
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 88/177 (49%), Gaps = 15/177 (8%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS+R ++VG+LP R++ED F + G I D+ K YAF+EF D RDA D
Sbjct: 1 MSAR----VFVGHLPRKVDRRDIEDYFDRIGRIRDVVHK-----GNYAFVEFADERDARD 51
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYS-----SGGSRGVSRRSDYRVLVT 115
AI +G ++ G R+ VELA+ RR S + +RG RR+DY++ +
Sbjct: 52 AISELNGTSWKGERIIVELANRRRRSRSQSGDRRGRNPRRKPGRITRGPPRRTDYQISIK 111
Query: 116 GLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
L + SWQDLKD V ++ R GIV++ + ++M K + F
Sbjct: 112 NLSTRVSWQDLKDIFGEVAKVVYADAHNKRRNY-GIVEFDTKEEMNRCYEKFNGKSF 167
>gi|50420251|ref|XP_458658.1| DEHA2D04400p [Debaryomyces hansenii CBS767]
gi|49654325|emb|CAG86797.1| DEHA2D04400p [Debaryomyces hansenii CBS767]
Length = 282
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 82/171 (47%), Gaps = 28/171 (16%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++V L + +VE F GP+ D+ L G+AF+ FE+ DA+ A+ D
Sbjct: 7 IFVRPLAFEVEREQVEAHFSDVGPLTDVQLM-----RGFAFVTFENEEDAKRAVETLDNT 61
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
+F+G L++E A + + R +RV VT LP +WQD KD
Sbjct: 62 DFEGQPLQIEFAREKKEDT-------------------RGQFRVKVTNLPDGTAWQDFKD 102
Query: 129 HMRRAGDVC--FSQVFR--DRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNA 175
+R ++ F++VFR D + G +++ S D++ I L+ SEF+ A
Sbjct: 103 FVRDRTELAPTFAKVFRNYDTDEVIGALEFGSADELATVIPLLNESEFQGA 153
>gi|349604033|gb|AEP99695.1| Splicing factor, arginine/serine-rich 9-like protein, partial
[Equus caballus]
Length = 105
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 52/69 (75%), Gaps = 4/69 (5%)
Query: 116 GLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-N 174
GLP S SWQDLKDHMR AGDVC++ V +D GM G+V+Y +DM+YA+RKLD ++FR +
Sbjct: 1 GLPPSGSWQDLKDHMREAGDVCYADVQKD--GM-GMVEYLRKEDMEYALRKLDDTKFRSH 57
Query: 175 AFSRSYVRV 183
SY+RV
Sbjct: 58 EGETSYIRV 66
>gi|194374487|dbj|BAG57139.1| unnamed protein product [Homo sapiens]
Length = 158
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 70/123 (56%), Gaps = 9/123 (7%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L R R+VE F YG I+++DLK GY F+EF+D RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
+ G R+ VE A G RR S S Y SG + G R++YR++V L S SWQ
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 125 DLK 127
DLK
Sbjct: 119 DLK 121
>gi|68058719|ref|XP_671328.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56487404|emb|CAI03297.1| hypothetical protein PB301122.00.0 [Plasmodium berghei]
Length = 96
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNLP R+VE+ F K+G I+ D+K +AF+EFED RDA DAI+ +DG
Sbjct: 10 IYVGNLPSHVTSRDVENEFRKFGTILKCDVKKTVSGAAFAFIEFEDARDAADAIKEKDGC 69
Query: 69 NFDGYRLRVELAHGGRRHSS 88
+F G +LRVE+ R + +
Sbjct: 70 DFGGNKLRVEVPFNARANGN 89
>gi|224130604|ref|XP_002320882.1| predicted protein [Populus trichocarpa]
gi|222861655|gb|EEE99197.1| predicted protein [Populus trichocarpa]
Length = 236
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 112/248 (45%), Gaps = 24/248 (9%)
Query: 7 RTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRD 66
R ++VGN +TR E+E LF KYG + +D+K G+AF+ FED RDA DAIRG D
Sbjct: 1 RPIFVGNFEQETRQSELERLFRKYGRVERVDMK-----SGFAFVYFEDDRDAADAIRGLD 55
Query: 67 G--YNFDGYRLRVELA--HGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGL-PSSA 121
+ +D RL VE A + G R + G V++R + V P
Sbjct: 56 NIPFGYDRRRLSVEWARVYAGER--------GRHRDGPRSTVNQRPTKTLFVINFDPIHT 107
Query: 122 SWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYV 181
+D+K H R G+V ++ R+ V + + +D A+++ ++ +
Sbjct: 108 RVEDIKRHFERYGEVLHVRIRRN----FAFVQFETQEDATKALQRTHMTKILDRVVSVEY 163
Query: 182 RVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYSPRGKYSRRS 241
+R+ R SP R YY RS SP + R +P +SP Y+ RRS
Sbjct: 164 ALRDDSERGDRYDSPRRGSYY--GRSPSPAHHRRPNPDYGRGHSPVYDKYNGPVHDRRRS 221
Query: 242 PSLSPARS 249
P RS
Sbjct: 222 PDYGRNRS 229
>gi|393904919|gb|EJD73832.1| hypothetical protein LOAG_18772 [Loa loa]
Length = 199
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP D +E+ED F ++G I + + RPPG+AF+EFED RDAEDA++ DG
Sbjct: 12 VYVGGLPQDATSQELEDAFNRFGRIRKV--WVARRPPGFAFVEFEDARDAEDAVKALDGT 69
Query: 69 NFDGYRLRVELAH 81
G R RVE++H
Sbjct: 70 RICGVRARVEISH 82
>gi|126274640|ref|XP_001388006.1| predicted protein [Scheffersomyces stipitis CBS 6054]
gi|126213876|gb|EAZ63983.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 271
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 88/177 (49%), Gaps = 28/177 (15%)
Query: 3 SRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAI 62
S + ++V L + ++E F GPI D+ + G+A++ FE+ DA AI
Sbjct: 2 SEAGVKVFVRPLSFEVEREQLESHFGTAGPIADVLIL-----RGFAYITFENSEDATRAI 56
Query: 63 RGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSAS 122
+ FDG +L+VE A R R YRV +T LP +A+
Sbjct: 57 ETFNATEFDGQQLQVETAR-------------------ERPEDTRGKYRVKITNLPDNAA 97
Query: 123 WQDLKDHMRRAG--DVCFSQVFRD--RGGMTGIVDYTSYDDMKYAIRKLDRSEFRNA 175
WQDLKD +R F+++ RD G ++G +++ S ++++ AI LD++EF++A
Sbjct: 98 WQDLKDFVREKTGYQGLFAKINRDYESGEVSGSLEFASAEELERAIPLLDKAEFQDA 154
>gi|149390935|gb|ABR25485.1| pre mRNA splicing factor sf2 [Oryza sativa Indica Group]
Length = 154
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/42 (78%), Positives = 39/42 (92%)
Query: 146 GGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYD 187
GG GIVDYT+YDDMKYAIRKLD SEF+NAFS++Y+RV+EYD
Sbjct: 2 GGTIGIVDYTNYDDMKYAIRKLDDSEFKNAFSKAYIRVKEYD 43
>gi|428186342|gb|EKX55192.1| hypothetical protein GUITHDRAFT_160399 [Guillardia theta CCMP2712]
Length = 321
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 70/139 (50%), Gaps = 3/139 (2%)
Query: 43 RPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHG-GRRHSSSMDRYSSYSSGGS 101
+ GY F++FE DAEDAI DGY +G +LRV+ HG + DR GS
Sbjct: 2 KSAGYGFVKFEKSSDAEDAISQYDGYELEGNKLRVQ--HGRSQAGRRGDDRGGYDGGQGS 59
Query: 102 RGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMK 161
RG RV V G+ SWQDLKD R+AG+ ++ D G G+++Y + +D
Sbjct: 60 RGPRPTGQNRVYVDGIDEKTSWQDLKDFARKAGNPAYTDTVMDSKGKYGVIEYRTAEDCY 119
Query: 162 YAIRKLDRSEFRNAFSRSY 180
A R LD + + R Y
Sbjct: 120 SACRMLDGTMIGSCKVRVY 138
>gi|340506876|gb|EGR32928.1| splicing arginine serine-rich 4, putative [Ichthyophthirius
multifiliis]
Length = 243
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
L++GNL D R++E++F KYG + +I +K Y F+EF+D+RDA+DA+ +
Sbjct: 25 LFIGNLSKDADKRDLENIFKKYGTVKEIKIKATG-SNHYGFIEFQDHRDAKDALDDCNNM 83
Query: 69 NFDGYRLRVELAHGGRR 85
F G ++R+E HGG+R
Sbjct: 84 EFKGKQIRLEFGHGGKR 100
>gi|426374380|ref|XP_004054052.1| PREDICTED: serine/arginine-rich splicing factor 9 [Gorilla gorilla
gorilla]
Length = 115
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 50/71 (70%), Gaps = 4/71 (5%)
Query: 114 VTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
GLP S SWQDLKDHMR AGDVC++ V +D GM V+Y +DM+YA+RKLD ++FR
Sbjct: 9 CLGLPPSGSWQDLKDHMREAGDVCYADVQKDGVGM---VEYLRKEDMEYALRKLDDTKFR 65
Query: 174 -NAFSRSYVRV 183
+ SY+RV
Sbjct: 66 SHEGETSYIRV 76
>gi|300681317|emb|CAZ96031.1| arginine/serine-rich splicing factor [Sorghum bicolor]
Length = 324
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 101/223 (45%), Gaps = 33/223 (14%)
Query: 7 RTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRD 66
R ++ GNL D R+ EVE LF KYG + +DLK R G+AF+ ED RDAEDAI D
Sbjct: 26 RPVFCGNLDYDVRISEVERLFGKYGRVERVDLKTVERSGGFAFVYMEDERDAEDAIHRLD 85
Query: 67 GYNF--DGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRV-------LVTGL 117
G +F G R+RVE R + G RG SRRS + ++
Sbjct: 86 GIDFGRKGRRIRVEWTKEDR-------------TAGRRGSSRRSPTQARPTKTLFVINFD 132
Query: 118 PSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFS 177
P + +DL+ H + G V ++ ++ V + +D A+ + S F +
Sbjct: 133 PINTRIRDLERHFDKYGRVANVRIKKN----FAFVQFEVQEDATRALEGTNGSHFMDRVI 188
Query: 178 RSYVRVREYDSR--RSYSRSPSRSPYYSRSRSRSPYYSRSRSP 218
+R+ D + R SP R R R RSP RS SP
Sbjct: 189 SVEYALRDDDEKGERGNGYSPDR-----RGRERSPGRRRSPSP 226
>gi|307187926|gb|EFN72839.1| RNA-binding protein 1 [Camponotus floridanus]
Length = 213
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
S +YVGNL E+E F KYGP+ +I + PPG+AF+EFED RDAEDA+RG
Sbjct: 10 SCKVYVGNLGSSASKHELEGKFSKYGPLRNI--WVARNPPGFAFVEFEDPRDAEDAVRGL 67
Query: 66 DGYNFDGYRLRVEL 79
DG + G R+RVE+
Sbjct: 68 DGVHLCGTRVRVEM 81
>gi|225712010|gb|ACO11851.1| RNA-binding protein 1 [Lepeophtheirus salmonis]
Length = 152
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
S +Y+GNL E+ED F KYGP+ ++ + PPG+AF+EFED RDAED++RG
Sbjct: 10 SCKVYIGNLGNSASKYELEDAFSKYGPLKNV--WVARNPPGFAFVEFEDPRDAEDSVRGL 67
Query: 66 DGYNFDGYRLRVELAHGGRRH 86
DG G R+RVE++ G R+
Sbjct: 68 DGTRVCGQRVRVEMSSGQSRN 88
>gi|226472962|emb|CAX71167.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
Length = 161
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 49/64 (76%), Gaps = 4/64 (6%)
Query: 123 WQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYV 181
WQDLKDHMR AGDV ++ VFRD TG+V++ Y+DMKYAIR+LD S+FR + SY+
Sbjct: 68 WQDLKDHMREAGDVGYADVFRDG---TGVVEFLRYEDMKYAIRRLDDSKFRSHEGESSYI 124
Query: 182 RVRE 185
RVRE
Sbjct: 125 RVRE 128
>gi|290561220|gb|ADD38012.1| RNA-binding protein 1 [Lepeophtheirus salmonis]
Length = 152
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
S +Y+GNL E+ED F KYGP+ ++ + PPG+AF+EFED RDAED++RG
Sbjct: 10 SCKVYIGNLGNSASKYELEDAFSKYGPLKNV--WVARNPPGFAFVEFEDPRDAEDSVRGL 67
Query: 66 DGYNFDGYRLRVELAHGGRRH 86
DG G R+RVE++ G R+
Sbjct: 68 DGTRVCGQRVRVEMSSGQSRN 88
>gi|440803033|gb|ELR23947.1| hypothetical protein ACA1_075260 [Acanthamoeba castellanii str.
Neff]
Length = 178
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 58/95 (61%), Gaps = 5/95 (5%)
Query: 3 SRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAI 62
S S+ +YVG L TR R++ED F KYG I+ +D+K GYAF+E+ D RDA+DA+
Sbjct: 2 SGSNCVVYVGRLSSRTRERDLEDAFSKYGRIIRLDMKA-----GYAFIEYNDSRDADDAV 56
Query: 63 RGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYS 97
RG DG + DG R+ VE +H G S + ++
Sbjct: 57 RGMDGNDLDGARISVEPSHRGEGRCFSCGKEGHWA 91
>gi|148298845|ref|NP_001091768.1| arginine/serine-rich splicing factor 7 [Bombyx mori]
gi|95103084|gb|ABF51483.1| arginine/serine-rich splicing factor 7 [Bombyx mori]
gi|102269217|gb|ABF55972.2| xl6 [Bombyx mori]
Length = 176
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS +YVG+L + E+ED F YGP+ ++ + PPG+AF+EFED RDAED
Sbjct: 1 MSRYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNV--WVARNPPGFAFVEFEDPRDAED 58
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSS 88
A+RG DG G R RVE+++GGR + S
Sbjct: 59 AVRGLDGRTICGRRARVEMSNGGRGYGS 86
>gi|443712169|gb|ELU05591.1| hypothetical protein CAPTEDRAFT_222188 [Capitella teleta]
Length = 225
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS RS +L++G L TR R++ED F KYG I+ D+K YAFL+FED+RDAED
Sbjct: 1 MSRRSQGSLFIGRLDKHTRTRDLEDRFEKYGRILRCDVKYGAEM-AYAFLDFEDHRDAED 59
Query: 61 AIRGRDGYNFDGYRLRVELAHGG-RRHSSSMDRY 93
A++ +G + G + VE A G RR SS Y
Sbjct: 60 ALKEENGREYQGVSMVVEWAKGAPRRQQSSQQAY 93
>gi|324532579|gb|ADY49247.1| Splicing factor, arginine/serine-rich 6, partial [Ascaris suum]
Length = 156
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP D +EVED F +YG I + + RPPG+AF+EFED RDAED+++ DG
Sbjct: 12 VYVGGLPQDATSQEVEDAFSRYGRIRKV--WVARRPPGFAFVEFEDSRDAEDSVKALDGT 69
Query: 69 NFDGYRLRVELAH 81
G R RVEL+H
Sbjct: 70 RICGVRARVELSH 82
>gi|300681351|emb|CAZ96098.1| arginine/serine-rich splicing factor [Saccharum hybrid cultivar
R570]
Length = 315
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 108/256 (42%), Gaps = 53/256 (20%)
Query: 7 RTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRD 66
R ++ GNL D R+ EVE LF KYG + +DLK R G+AF+ ED RDAEDAI D
Sbjct: 26 RPVFCGNLDYDVRISEVERLFGKYGRVERVDLKTVERSGGFAFVYMEDERDAEDAIHRLD 85
Query: 67 GYNF--DGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRV-------LVTGL 117
G +F G R+RVE R + G RG SRRS ++
Sbjct: 86 GIDFGRKGRRIRVEWTKEDR-------------TVGRRGSSRRSPTNARPTKTLFVINFD 132
Query: 118 PSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFS 177
P + +DL+ H + G V ++ ++ V + +D A+ + S F +
Sbjct: 133 PINTRIRDLERHFDKYGRVANVRIKKN----FAFVQFEVQEDATRALEGTNGSHFMDRVI 188
Query: 178 RSYVRVREYDS-----------RRSYSRSPSR--------------SPYYSRSRSR-SPY 211
+R+ D RR RSP R SP Y RS+ R SP
Sbjct: 189 SVEYALRDDDEKGERGNGYSPDRRGRERSPGRRRSPSPYGRGRERGSPDYGRSKERGSPD 248
Query: 212 YSR-SRSPSRSWSYSP 226
Y R RSP SP
Sbjct: 249 YGRGGRSPDNGRGVSP 264
>gi|268533694|ref|XP_002631976.1| Hypothetical protein CBG10243 [Caenorhabditis briggsae]
Length = 545
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 82/179 (45%), Gaps = 15/179 (8%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRP-PGYAFLEFEDYRDAEDAIRGRDG 67
+++GNLP D + D F G I ID+K PGY F+EF DAE A++ R+G
Sbjct: 173 IFLGNLPTDIDEDLLRDFFKTSGEIKYIDVKKGKAGRPGYGFMEFVKLEDAEKAVKTRNG 232
Query: 68 YNFDGYRLRVELAH-GGRRHSSSM-----DRYSSYSSG-GSRGVSRRSDYRVLVTGLPSS 120
+ +RVE + GG R M + YS G G RS +RV V P S
Sbjct: 233 FPICDKFIRVEFSTSGGPRGPGGMVLREGEISEEYSVARGRGGPQLRSVHRVYVDNCPPS 292
Query: 121 ASWQDLKDHMRRAGD-----VCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRN 174
+WQD+KD R D VCFS + + V++ +D+ AIR + N
Sbjct: 293 TTWQDIKDLFRGKNDPTGIEVCFSAI--NPIQRRAFVEFRLKEDVAKAIRLFHNKPYIN 349
>gi|389615269|dbj|BAM20617.1| RNA-binding protein [Papilio polytes]
Length = 159
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+E +F KYG I ++ + PPG+AF+EFED RDAED++RG DG
Sbjct: 13 VYVGNLGTNASKYEIEKIFSKYGNIRNV--WVARNPPGFAFVEFEDPRDAEDSVRGLDGT 70
Query: 69 NFDGYRLRVELAHG 82
G R+RVE+++G
Sbjct: 71 RCCGTRIRVEMSNG 84
>gi|170033187|ref|XP_001844460.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167873739|gb|EDS37122.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 159
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F KYGP+ ++ + PPG+AF+EFED RDAEDA R DG
Sbjct: 13 VYVGNLGSSASKHEIESAFGKYGPLRNV--WVARNPPGFAFVEFEDKRDAEDACRSLDGQ 70
Query: 69 NFDGYRLRVELAHG 82
G R+RVE++ G
Sbjct: 71 RCCGTRIRVEMSSG 84
>gi|322801941|gb|EFZ22488.1| hypothetical protein SINV_01609 [Solenopsis invicta]
Length = 289
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F KYGP+ ++ + PPG+AF+EFED RDAEDA+RG DG
Sbjct: 40 VYVGNLGSSASKHEIESAFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRGLDGT 97
Query: 69 NFDGYRLRVEL 79
G R+RVE+
Sbjct: 98 RCCGTRVRVEM 108
>gi|312089498|ref|XP_003146269.1| hypothetical protein LOAG_10696 [Loa loa]
Length = 113
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP D +E+ED F ++G I + + RPPG+AF+EFED RDAEDA++ DG
Sbjct: 12 VYVGGLPQDATSQELEDAFNRFGRIRKV--WVARRPPGFAFVEFEDARDAEDAVKALDGT 69
Query: 69 NFDGYRLRVELAH 81
G R RVE++H
Sbjct: 70 RICGVRARVEISH 82
>gi|255728963|ref|XP_002549407.1| predicted protein [Candida tropicalis MYA-3404]
gi|240133723|gb|EER33279.1| predicted protein [Candida tropicalis MYA-3404]
Length = 283
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 82/176 (46%), Gaps = 28/176 (15%)
Query: 4 RSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIR 63
SS+ L+V L + +V+D F + P+VD+ L GYAF+ FE+ DA+ AI
Sbjct: 6 ESSKQLFVRPLAYEVTSEQVQDHFSRAAPVVDVRLM-----EGYAFVTFENEEDAKQAIE 60
Query: 64 GRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASW 123
+G +L++E A R R YR+ +T LP +W
Sbjct: 61 LLGETELNGVKLQIEFAR-------------------ERKEDTRGKYRLSITNLPEGTAW 101
Query: 124 QDLKDHMRRAGD--VCFSQVFR--DRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNA 175
QD+KD +R + V + +VF + T + + S +D++ AI LD+S F +
Sbjct: 102 QDVKDFVREKTNSPVNYVKVFTNYETNETTCSLQFESAEDLEKAIPLLDKSIFNDV 157
>gi|224138530|ref|XP_002322837.1| predicted protein [Populus trichocarpa]
gi|222867467|gb|EEF04598.1| predicted protein [Populus trichocarpa]
Length = 179
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/218 (36%), Positives = 101/218 (46%), Gaps = 56/218 (25%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
+S LYVG+L TR R++E LF KYG + D+D+K YAF+EF D RDA+DA
Sbjct: 9 ASTRLYVGHLAARTRSRDLEHLFSKYGRVRDVDMKR-----DYAFVEFSDPRDADDARHY 63
Query: 65 RDGYNFDGYRLRVELAHGGRRHSSS-MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASW 123
DG +FDG R+ VE A G R S + R SG R G+ W
Sbjct: 64 LDGKDFDGSRIIVEFAKGVPRGSREYLGRGPPPGSG-----------RCFNCGI--DGHW 110
Query: 124 -QDLKDHMRRAGD---VCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRS 179
+D K AGD C+ R G G ++ + K + +KL +
Sbjct: 111 ARDCK-----AGDWKNKCY------RCGERGHIER----NCKNSPKKLTKRG-------- 147
Query: 180 YVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRS 217
RSYSRSP RSP R RSRSP YSR RS
Sbjct: 148 ----------RSYSRSPDRSPSPHRGRSRSPSYSRGRS 175
>gi|222137596|gb|ACM45325.1| rbp1-like RNA-binding protein PB [Bombyx mori]
Length = 159
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 58/91 (63%), Gaps = 6/91 (6%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+E +F KYG I ++ + PPG+AF+EFED RDAED++RG DG
Sbjct: 13 VYVGNLGTNASKYEIEKIFSKYGNIRNV--WVARNPPGFAFVEFEDPRDAEDSVRGLDGT 70
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSG 99
G R+RVE+++G R DR S +S+
Sbjct: 71 RCCGTRIRVEMSNGRTRR----DRRSIFSTN 97
>gi|172046468|emb|CAQ34906.1| SR family splicing factor 9G8 [Chironomus tentans]
Length = 216
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG+L + +E+ED F YGP+ + + PPG+AF+EFED RDAEDA+RG DG
Sbjct: 16 VYVGDLGSNADKQEIEDAFSYYGPLRSV--WVARNPPGFAFVEFEDARDAEDAVRGLDGR 73
Query: 69 NFDGYRLRVELAHG 82
G R RVEL+ G
Sbjct: 74 TICGRRARVELSTG 87
>gi|270000727|gb|EEZ97174.1| hypothetical protein TcasGA2_TC004361 [Tribolium castaneum]
Length = 123
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 56/94 (59%), Gaps = 2/94 (2%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
S +YVGNL E+E F KYGP+ ++ + PPG+AF+EFED RDAEDA+RG
Sbjct: 10 SCKVYVGNLGSSASKHEIESAFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRGL 67
Query: 66 DGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSG 99
DG G R+RVE+++G R YSSG
Sbjct: 68 DGTRCCGTRVRVEMSNGRSRRGGGRRGPMRYSSG 101
>gi|195394324|ref|XP_002055795.1| GJ10582 [Drosophila virilis]
gi|194142504|gb|EDW58907.1| GJ10582 [Drosophila virilis]
Length = 140
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E+ F KYGP+ ++ I PPG+AF+EFED RDAEDA R DG
Sbjct: 13 VYVGNLGSSASKFEIENAFNKYGPLRNV--WIARNPPGFAFVEFEDRRDAEDATRALDGT 70
Query: 69 NFDGYRLRVELAHG 82
G R+RVE++ G
Sbjct: 71 RCCGTRIRVEMSSG 84
>gi|225710746|gb|ACO11219.1| RNA-binding protein 1 [Caligus rogercresseyi]
Length = 152
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
S +Y+GNL E+ED F KYGP+ ++ + PPG+AF+EFED RDAED++RG
Sbjct: 10 SCKVYIGNLGNSASKYELEDAFSKYGPLKNV--WVARNPPGFAFVEFEDPRDAEDSVRGL 67
Query: 66 DGYNFDGYRLRVELAHG 82
DG G R+RVE++ G
Sbjct: 68 DGTRVCGQRVRVEMSSG 84
>gi|393904918|gb|EJD73831.1| hypothetical protein, variant [Loa loa]
Length = 145
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP D +E+ED F ++G I + + RPPG+AF+EFED RDAEDA++ DG
Sbjct: 12 VYVGGLPQDATSQELEDAFNRFGRIRKV--WVARRPPGFAFVEFEDARDAEDAVKALDGT 69
Query: 69 NFDGYRLRVELAH 81
G R RVE++H
Sbjct: 70 RICGVRARVEISH 82
>gi|448878364|gb|AGE46145.1| arginine/serine-rich splicing factor SR30 transcript IV [Sorghum
bicolor]
Length = 97
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 45/71 (63%), Gaps = 19/71 (26%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYK-------------------YGPIVDIDLKIP 41
M+ R+ T+YVGNLPGD R REV+DLFYK YG IV+IDLKIP
Sbjct: 1 MTRRNGCTIYVGNLPGDIREREVDDLFYKSNGWSSGREGNVDCEWSIFYGRIVEIDLKIP 60
Query: 42 PRPPGYAFLEF 52
PRPPG+AF+E
Sbjct: 61 PRPPGFAFVEL 71
>gi|198432071|ref|XP_002131223.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 4
(Pre-mRNA-splicing factor SRP75) (SRP001LB) [Ciona
intestinalis]
Length = 277
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 107 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 166
R+ YRV+V L S SWQDLKD++R+AGDV F++ + GIVD+ +YDDMK AI K
Sbjct: 151 RTKYRVIVENLSSRVSWQDLKDYLRQAGDVSFAEAHQSVQN-EGIVDFATYDDMKAAIEK 209
Query: 167 LDRSEF 172
LD +E
Sbjct: 210 LDDTEL 215
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L +VE F +G I ++ LK GY F+EFE+ RDAEDA+ +
Sbjct: 21 VFIGRLSNRATESDVERFFKGFGRIREVKLK-----TGYGFVEFEENRDAEDAVYEMNNQ 75
Query: 69 NFDGYRLRVELAHG 82
+ G R+ VE A G
Sbjct: 76 SLCGERVTVEHAKG 89
>gi|356520256|ref|XP_003528779.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like [Glycine
max]
Length = 259
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 120/273 (43%), Gaps = 51/273 (18%)
Query: 7 RTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRD 66
R ++ GNL DTR E+E LF KYG I +D+K G+AF+ +ED RDAE+AIR D
Sbjct: 2 RPIFAGNLEYDTRQSELERLFAKYGRIDRVDMK-----SGFAFVYYEDERDAEEAIRALD 56
Query: 67 GYNF--DGYRLRVELAHG--GRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSAS 122
F + RL VE A G GR H GS+ + + ++ P
Sbjct: 57 NVPFGHEKRRLSVEWARGERGRHHD------------GSKANQKPTKTLFVINFDPIRTR 104
Query: 123 WQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVR 182
+D++ H G+V ++ R+ V + + +D A+ + S+ +
Sbjct: 105 VRDIEKHFEPYGNVLHVRIRRN----FAFVQFETQEDATKALECTNMSKILDRVVSVEYA 160
Query: 183 VRE-------YDSRR---SYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYS 232
+R+ YDS R Y RSP SPY+ R SP Y R RSP Y+
Sbjct: 161 LRDDGERGDNYDSPRRRGGYERSP--SPYHRRP---SPDYGRPRSPVYD--------RYN 207
Query: 233 PRGKYSRRSPSLSPARSAS---QRSPSGSPPRS 262
G RRSP RS +RSP PRS
Sbjct: 208 GGGPDMRRSPDYGRHRSPDYGRRRSPDYGKPRS 240
>gi|443725387|gb|ELU13010.1| hypothetical protein CAPTEDRAFT_155910 [Capitella teleta]
Length = 268
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 54/81 (66%), Gaps = 2/81 (2%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
S +YVG+LP D + +E+E F YGP+ + + PPG+AF+EFED RDA+D++RG
Sbjct: 28 SDTKVYVGDLPRDAQEKELERAFSYYGPLKSV--WVARNPPGFAFVEFEDPRDADDSVRG 85
Query: 65 RDGYNFDGYRLRVELAHGGRR 85
DG + G R+RVEL+ G R
Sbjct: 86 LDGSSLCGTRVRVELSTGKVR 106
>gi|393904920|gb|EFO17802.2| hypothetical protein LOAG_10698 [Loa loa]
Length = 133
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VG LP D E+E+ F KYG I + L RPPG+AF+EFED RDAEDA++G DG
Sbjct: 12 VFVGGLPNDASSEELEEAFSKYGRIKKVWL--ARRPPGFAFVEFEDSRDAEDAVKGLDGT 69
Query: 69 NFDGYRLRVELAH 81
G R RVE +H
Sbjct: 70 RICGVRPRVEFSH 82
>gi|170596504|ref|XP_001902788.1| RNA-binding protein. [Brugia malayi]
gi|158589316|gb|EDP28363.1| RNA-binding protein., putative [Brugia malayi]
Length = 130
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VG LP D E+E+ F KYG I + L RPPG+AF+EFED RDAEDA++G DG
Sbjct: 12 VFVGGLPNDASSEELEEAFSKYGRIKKVWL--ARRPPGFAFIEFEDSRDAEDAVKGLDGT 69
Query: 69 NFDGYRLRVELAH 81
G R RVE +H
Sbjct: 70 RICGVRPRVEFSH 82
>gi|324512982|gb|ADY45358.1| Splicing factor, arginine/serine-rich 6 [Ascaris suum]
Length = 142
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP D +E+ED F ++G I + + RPPG+AF+EFED RDAED+++ DG
Sbjct: 12 VYVGGLPQDATSQEIEDAFNRFGRIRKV--WVARRPPGFAFVEFEDSRDAEDSVKALDGT 69
Query: 69 NFDGYRLRVELAH 81
G R RVEL+H
Sbjct: 70 RICGVRARVELSH 82
>gi|324506217|gb|ADY42661.1| Splicing factor, arginine/serine-rich 6 [Ascaris suum]
Length = 163
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP D +E+ED F ++G I + + RPPG+AF+EFED RDAED+++ DG
Sbjct: 12 VYVGGLPQDATSQEIEDAFNRFGRIRKV--WVARRPPGFAFVEFEDSRDAEDSVKALDGT 69
Query: 69 NFDGYRLRVELAH 81
G R RVEL+H
Sbjct: 70 RICGVRARVELSH 82
>gi|255645349|gb|ACU23171.1| unknown [Glycine max]
Length = 259
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 120/273 (43%), Gaps = 51/273 (18%)
Query: 7 RTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRD 66
R ++ GNL DTR E+E LF KYG I +D+K G+AF+ +ED RDAE+AIR D
Sbjct: 2 RPIFAGNLEYDTRQSELERLFAKYGRIDRVDMK-----SGFAFVFYEDERDAEEAIRALD 56
Query: 67 GYNF--DGYRLRVELAHG--GRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSAS 122
F + RL VE A G GR H GS+ + + ++ P
Sbjct: 57 NVPFGHEKRRLSVEWARGERGRHHD------------GSKANQKPTKTLFVINFDPIRTR 104
Query: 123 WQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVR 182
+D++ H G+V ++ R+ V + + +D A+ + S+ +
Sbjct: 105 VRDIEKHFEPYGNVLHVRIRRN----FAFVQFETQEDATKALECTNMSKILDRVVSVEYA 160
Query: 183 VRE-------YDS---RRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYS 232
+R+ YDS R Y RSP SPY+ R SP Y R RSP Y+
Sbjct: 161 LRDDGERGDNYDSPRRRGGYERSP--SPYHRRP---SPDYGRPRSPVYD--------RYN 207
Query: 233 PRGKYSRRSPSLSPARSAS---QRSPSGSPPRS 262
G RRSP RS +RSP PRS
Sbjct: 208 GGGPDMRRSPDYGRHRSPDYGRRRSPDYGKPRS 240
>gi|332027347|gb|EGI67431.1| RNA-binding protein 1 [Acromyrmex echinatior]
Length = 133
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
S +YVGNL E+E F KYGP+ ++ + PPG+AF+EFED RDAEDA+RG
Sbjct: 10 SCKVYVGNLGSSASKHEIESAFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRGL 67
Query: 66 DGYNFDGYRLRVEL 79
DG G R+RVE+
Sbjct: 68 DGTRCCGTRVRVEM 81
>gi|402591119|gb|EJW85049.1| hypothetical protein WUBG_04043 [Wuchereria bancrofti]
Length = 129
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP D +E+ED F ++G I + + RPPG+AF+EFED RDAEDA++ DG
Sbjct: 12 VYVGGLPQDATSQELEDAFNRFGRIRKV--WVARRPPGFAFVEFEDARDAEDAVKALDGT 69
Query: 69 NFDGYRLRVELAH 81
G R RVE++H
Sbjct: 70 RICGVRARVEISH 82
>gi|222137600|gb|ACM45327.1| rbp1-like RNA-binding protein PD [Bombyx mori]
Length = 117
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
S +YVGNL + E+E +F KYG I ++ + PPG+AF+EFED RDAED++RG
Sbjct: 10 SCKVYVGNLGTNASKYEIEKIFSKYGNIRNV--WVARNPPGFAFVEFEDPRDAEDSVRGL 67
Query: 66 DGYNFDGYRLRVELAHG 82
DG G R+RVE+++G
Sbjct: 68 DGTRCCGTRIRVEMSNG 84
>gi|222137598|gb|ACM45326.1| rbp1-like RNA-binding protein PC [Bombyx mori]
Length = 91
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
S +YVGNL + E+E +F KYG I ++ + PPG+AF+EFED RDAED++RG
Sbjct: 10 SCKVYVGNLGTNASKYEIEKIFSKYGNIRNV--WVARNPPGFAFVEFEDPRDAEDSVRGL 67
Query: 66 DGYNFDGYRLRVELAHG 82
DG G R+RVE+++G
Sbjct: 68 DGTRCCGTRIRVEMSNG 84
>gi|342326382|gb|AEL23106.1| hnRNP protein [Cherax quadricarinatus]
Length = 284
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 89/175 (50%), Gaps = 30/175 (17%)
Query: 10 YVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYN 69
YVG L R+++ F YG + DI +K G+ F+EF+D RDA+DA+ +G
Sbjct: 1 YVGGLSYRVGERDLDRFFRSYGRLRDIVIK-----NGFGFVEFDDDRDADDAVYEMNGKE 55
Query: 70 FDGYRLRVELAHGGRR------------HSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGL 117
G R+ VE A R HSS G++ R+DYR+ V L
Sbjct: 56 LLGGRVTVEKARAAPRMRWPRAPPPRGFHSSRF------------GMAARTDYRLTVEDL 103
Query: 118 PSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
S SWQDLKD MR+AG+V ++ + R G+V++ +Y DMK A+ +LD E
Sbjct: 104 SSRVSWQDLKDFMRQAGEVTYADAHKYRRN-EGVVEFATYADMKNAMHRLDGKEL 157
>gi|356559961|ref|XP_003548264.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like [Glycine
max]
Length = 264
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 103/224 (45%), Gaps = 37/224 (16%)
Query: 7 RTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRD 66
R ++ GNL DTR E+E LF KYG I +D+K G+AF+ +ED RDAE+AIR D
Sbjct: 2 RPIFAGNLEYDTRQSELERLFSKYGRIDRVDMK-----SGFAFVYYEDERDAEEAIRALD 56
Query: 67 GYNF--DGYRLRVELAHGGR-RHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASW 123
F + RL VE A G R RH GS+ + + ++ P
Sbjct: 57 NVPFGHEKRRLSVEWARGERGRHRD-----------GSKANQKPTKTLFVINFDPIRTRV 105
Query: 124 QDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRN-------AF 176
+D++ H G+V ++ R+ V + + +D AI + S+ + A
Sbjct: 106 RDIEKHFEPYGNVLHVRIRRN----FAFVQFETQEDATKAIECTNMSKILDRVVSVEYAL 161
Query: 177 SRSYVRVREYDSRR--SYSRSPSRSPYYSRSRSRSPYYSRSRSP 218
R YDS R Y RSP SPY+ R SP Y R RSP
Sbjct: 162 RDDGERGDNYDSPRRGGYERSP--SPYHRRP---SPDYGRPRSP 200
>gi|449273171|gb|EMC82779.1| Splicing factor, arginine/serine-rich 4, partial [Columba livia]
Length = 417
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 66/111 (59%), Gaps = 5/111 (4%)
Query: 66 DGYNFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSA 121
+G + G R+ VE A G RR SS S Y SG + G R++YR++V L S
Sbjct: 18 NGKDLCGERVIVEHARGPRRDSSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRC 77
Query: 122 SWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
SWQDLKD+MR+AG+V ++ + R G++++ SY DMK A+ KLD +E
Sbjct: 78 SWQDLKDYMRQAGEVTYADAHKGR-KNEGVIEFKSYSDMKRALEKLDGTEV 127
>gi|427795611|gb|JAA63257.1| Hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 127
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F K+GP+ ++ + PPG+AF+EFED RDAEDA R DG
Sbjct: 29 VYVGNLGSGAAKHEIEAAFTKFGPLRNV--WVARNPPGFAFVEFEDSRDAEDACRALDGS 86
Query: 69 NFDGYRLRVELAH 81
G R+RVE++H
Sbjct: 87 RLCGTRVRVEMSH 99
>gi|389609451|dbj|BAM18337.1| RNA-binding protein 1 [Papilio xuthus]
Length = 141
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
S +YVGNL + E+E +F KYG I ++ + PPG+AF+EFED RDAED++RG
Sbjct: 10 SCKVYVGNLGTNASKYEIEKIFSKYGNIRNV--WVARNPPGFAFVEFEDPRDAEDSVRGL 67
Query: 66 DGYNFDGYRLRVELAHG 82
DG G R+RVE+++G
Sbjct: 68 DGTRCCGTRIRVEMSNG 84
>gi|115361548|gb|ABI95863.1| RNA-binding protein [Bombyx mori]
Length = 142
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
S +YVGNL + E+E +F KYG I ++ + PPG+AF+EFED RDAED++RG
Sbjct: 10 SCKVYVGNLGTNASKYEIEKIFSKYGNIRNV--WVARNPPGFAFVEFEDPRDAEDSVRGL 67
Query: 66 DGYNFDGYRLRVELAHG 82
DG G R+RVE+++G
Sbjct: 68 DGTRCCGTRIRVEMSNG 84
>gi|307187925|gb|EFN72838.1| RNA-binding protein 1 [Camponotus floridanus]
Length = 101
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
S +YVGNL E+E F KYGP+ ++ + PPG+AF+EFED RDAEDA+RG
Sbjct: 10 SCKVYVGNLGSSASKHEIEGKFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRGL 67
Query: 66 DGYNFDGYRLRVEL 79
DG + G R+RVE+
Sbjct: 68 DGIHLCGTRVRVEM 81
>gi|383852334|ref|XP_003701683.1| PREDICTED: uncharacterized protein LOC100878663 [Megachile
rotundata]
Length = 263
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
S +YVGNL E+E F KYGP+ ++ + PPG+AF+EFED RDAEDA+RG
Sbjct: 10 SCKVYVGNLGNSASKHEIETAFSKYGPLRNV--WVARNPPGFAFVEFEDSRDAEDAVRGL 67
Query: 66 DGYNFDGYRLRVEL 79
DG G R+RVE+
Sbjct: 68 DGTRCCGTRVRVEM 81
>gi|170595883|ref|XP_001902557.1| Sr protein [Brugia malayi]
gi|158589706|gb|EDP28594.1| Sr protein, putative [Brugia malayi]
Length = 153
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP D +E+ED F ++G I + + RPPG+AF+EFED RDAEDA++ DG
Sbjct: 21 VYVGGLPQDATSQELEDAFNRFGRIRKV--WVARRPPGFAFVEFEDARDAEDAVKALDGT 78
Query: 69 NFDGYRLRVELAH 81
G R RVE++H
Sbjct: 79 RICGVRARVEISH 91
>gi|346473483|gb|AEO36586.1| hypothetical protein [Amblyomma maculatum]
Length = 131
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F K+GP+ ++ + PPG+AF+EFED RDAEDA R DG
Sbjct: 9 VYVGNLGSGAAKHEIEAAFTKFGPLRNV--WVARNPPGFAFVEFEDSRDAEDACRALDGS 66
Query: 69 NFDGYRLRVELAH 81
G R+RVE++H
Sbjct: 67 RLCGTRVRVEMSH 79
>gi|70943756|ref|XP_741887.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56520548|emb|CAH80503.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 562
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 89/187 (47%), Gaps = 28/187 (14%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VGN+ D R EV F KYG I++I K +AF+E+ AE+AI +G
Sbjct: 143 IFVGNISPDAREEEVRRKFAKYGDIINIQWKRR-----FAFIEYSKPIYAENAIHEENGK 197
Query: 69 NFDGYRLRVELAH------------GGRRHSSSMD------RYS-SYSSGGSRGVSRRSD 109
++ G L V+ H G ++ D +YS +YS + +++
Sbjct: 198 HYMGEELSVQAHHLSPFKNSYSGNYGNSYNNYKSDPRNYENKYSRNYSDNKFESIEKKNS 257
Query: 110 YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT----GIVDYTSYDDMKYAIR 165
R++V + SWQDLKD R G V ++ V + G GI++Y +Y+ MK A+
Sbjct: 258 LRIVVKNIDEKVSWQDLKDFGREVGSVNYANVIYNNNGNNKEWYGIIEYYNYETMKRAVE 317
Query: 166 KLDRSEF 172
L+ +F
Sbjct: 318 VLNGKKF 324
>gi|390457607|ref|XP_003731973.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 1-like [Callithrix jacchus]
Length = 373
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 84/163 (51%), Gaps = 14/163 (8%)
Query: 13 NLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDG 72
+LP ++ ++ ED+ YKY I D+DLK P PPG +DA+ G ++D
Sbjct: 32 HLPSESPTKDTEDMIYKYCTIRDMDLKNPRDPPGPLLSSV-----TQDAVYGLHSCDYDR 86
Query: 73 YRLRVELAHGGRRHSSSMDRYSSYSSGGSRG--VSRRSDYRVLVTGLPSSASWQDLKDHM 130
+V G + + S S G G ++R S RV+V+ LP S Q+LK HM
Sbjct: 87 CLTQV----GSPPNGLGTGQGGSESPQGFHGSPLTRWSXNRVVVSWLPPDGSXQELKXHM 142
Query: 131 RRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
G V +++V+++ +G+++ +DM + RKLD ++FR
Sbjct: 143 HETGGVYYAEVYQNG---SGVMEDVKKEDMNFLARKLDNTKFR 182
>gi|313227858|emb|CBY23007.1| unnamed protein product [Oikopleura dioica]
Length = 336
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 86/181 (47%), Gaps = 19/181 (10%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++GNL R+VED F K+G I +I LK G+ F+EF+D RDAEDAI +G
Sbjct: 4 VFIGNLTDRAEGRDVEDAFRKFGRIKEISLK-----NGFGFVEFDDVRDAEDAIHEMNGE 58
Query: 69 NFDGYRLRVELAH---------GGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPS 119
G R+ VELA R + S SG R R+ Y V+V L S
Sbjct: 59 RLCGDRITVELAKGGGGGGRDRSRSRSRGRSSHWDSRRSGRER--PHRTPYAVMVDNLSS 116
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRS 179
+W +LKD R+ G+V ++ G G V + + ++ R LD +E + RS
Sbjct: 117 RCTWAELKDIFRKFGEVTYTDAHYRSGDGRGEVCFATREEQD---RCLDEAEGMDINGRS 173
Query: 180 Y 180
Sbjct: 174 I 174
>gi|91094459|ref|XP_967049.1| PREDICTED: similar to AGAP007325-PA isoform 1 [Tribolium
castaneum]
Length = 129
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
S +YVGNL E+E F KYGP+ ++ + PPG+AF+EFED RDAEDA+RG
Sbjct: 10 SCKVYVGNLGSSASKHEIESAFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRGL 67
Query: 66 DGYNFDGYRLRVELAH 81
DG G R+RVE+++
Sbjct: 68 DGTRCCGTRVRVEMSN 83
>gi|300681335|emb|CAZ96065.1| arginine/serine-rich splicing factor [Saccharum hybrid cultivar
R570]
Length = 324
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 96/312 (30%), Positives = 125/312 (40%), Gaps = 74/312 (23%)
Query: 7 RTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRD 66
R ++ GNL D R+ EVE LF KYG + +DLK R G+AF+ ED RDAEDAI D
Sbjct: 26 RPIFCGNLDYDVRISEVERLFGKYGRVERVDLKTVERSGGFAFVYMEDERDAEDAIHRLD 85
Query: 67 GYNF--DGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRV-------LVTGL 117
G +F G R+RVE R + G RG SRRS ++
Sbjct: 86 GIDFGRKGRRIRVEWTKEDR-------------TVGRRGSSRRSPTNARPTKTLFVINFD 132
Query: 118 PSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFS 177
P + +DL+ H + G V ++ ++ V + +D A+ + S F +
Sbjct: 133 PINTRIRDLERHFDKYGRVANVRIKKN----FAFVQFEVQEDATRALEGTNGSHFMDRVI 188
Query: 178 RSYVRVREYDS-----------RRSYSRSPSR--------------SPYYSRSRSR-SPY 211
+R+ D RR RSP R SP Y RS+ R SP
Sbjct: 189 SVEYALRDDDEKGERGNGYSPDRRGRERSPGRRRSPSPYGRGRERGSPDYGRSKERGSPD 248
Query: 212 YSRS----------RSPSRSWSYSP--RSRSYSPRG----KYSRRSPSLSPARSASQ--- 252
Y R RSP SP SR RG Y R SP R +
Sbjct: 249 YGRGGRSPDNGRGGRSPDNGRGVSPINGSRGDHDRGGRSPDYDREHREASPRRERREASP 308
Query: 253 ---RSPSGSPPR 261
RSPS SP R
Sbjct: 309 GYDRSPSRSPGR 320
>gi|380012960|ref|XP_003690540.1| PREDICTED: uncharacterized protein LOC100863202 [Apis florea]
Length = 191
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
S +YVGNL E+E F KYGP+ ++ + PPG+AF+EFED RDAEDA+RG
Sbjct: 41 SCKVYVGNLGNSASKHEIESAFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRGL 98
Query: 66 DGYNFDGYRLRVEL 79
DG G R+RVE+
Sbjct: 99 DGTRCCGTRVRVEM 112
>gi|237843959|ref|XP_002371277.1| hypothetical protein TGME49_011420 [Toxoplasma gondii ME49]
gi|211968941|gb|EEB04137.1| hypothetical protein TGME49_011420 [Toxoplasma gondii ME49]
Length = 171
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M + R +Y+G + DT E+E +F KYG I + + PPG+AFL F+DYRDA+D
Sbjct: 6 MDDQEGRKVYIGGIEADTTTEELESIFGKYGTISTV--WVARNPPGFAFLTFDDYRDAKD 63
Query: 61 AIRGRDGYNFDGYRLRVELAHG 82
A+ DGY + G +RVE+A G
Sbjct: 64 AVAELDGYRYRGKPIRVEIARG 85
>gi|146414105|ref|XP_001483023.1| hypothetical protein PGUG_04978 [Meyerozyma guilliermondii ATCC
6260]
Length = 251
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 67/134 (50%), Gaps = 23/134 (17%)
Query: 46 GYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVS 105
GYAF+ FE+ D A+ +G FDG L+VE A R
Sbjct: 3 GYAFVTFENSEDTAKAVETMNGTEFDGQTLQVEFAK-------------------ERKED 43
Query: 106 RRSDYRVLVTGLPSSASWQDLKDHMRRAGDV--CFSQVFRD--RGGMTGIVDYTSYDDMK 161
R +RV VT LP +WQD KD +R ++ F++VFRD G + G +++ S +++
Sbjct: 44 TRGQFRVKVTNLPDGTAWQDFKDFVRDKTELTPTFAKVFRDYESGEVIGALEFGSREELD 103
Query: 162 YAIRKLDRSEFRNA 175
A+ LD++EF++
Sbjct: 104 KAVPLLDKAEFQDV 117
>gi|91094467|ref|XP_976127.1| PREDICTED: similar to AGAP007325-PA isoform 5 [Tribolium
castaneum]
Length = 111
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
S +YVGNL E+E F KYGP+ ++ + PPG+AF+EFED RDAEDA+RG
Sbjct: 10 SCKVYVGNLGSSASKHEIESAFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRGL 67
Query: 66 DGYNFDGYRLRVELAH 81
DG G R+RVE+++
Sbjct: 68 DGTRCCGTRVRVEMSN 83
>gi|312089500|ref|XP_003146270.1| hypothetical protein LOAG_10698 [Loa loa]
Length = 111
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VG LP D E+E+ F KYG I + L RPPG+AF+EFED RDAEDA++G DG
Sbjct: 12 VFVGGLPNDASSEELEEAFSKYGRIKKVWLA--RRPPGFAFVEFEDSRDAEDAVKGLDGT 69
Query: 69 NFDGYRLRVELAH 81
G R RVE +H
Sbjct: 70 RICGVRPRVEFSH 82
>gi|389608975|dbj|BAM18099.1| hypothetical protein [Papilio xuthus]
Length = 145
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 53/84 (63%), Gaps = 2/84 (2%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS +YVG+L + E+ED F YGP+ ++ + PPG+AF+EFED RDAED
Sbjct: 1 MSRYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNV--WVARNPPGFAFVEFEDPRDAED 58
Query: 61 AIRGRDGYNFDGYRLRVELAHGGR 84
AIRG DG G R RVE+++G R
Sbjct: 59 AIRGLDGRTICGRRARVEMSNGSR 82
>gi|328793355|ref|XP_001123058.2| PREDICTED: RNA-binding protein 1-like [Apis mellifera]
Length = 150
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
S +YVGNL E+E F KYGP+ ++ + PPG+AF+EFED RDAEDA+RG
Sbjct: 14 SCKVYVGNLGNSASKHEIESAFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRGL 71
Query: 66 DGYNFDGYRLRVEL 79
DG G R+RVE+
Sbjct: 72 DGTRCCGTRVRVEM 85
>gi|158285865|ref|XP_001687957.1| AGAP007325-PB [Anopheles gambiae str. PEST]
gi|157020194|gb|EDO64606.1| AGAP007325-PB [Anopheles gambiae str. PEST]
Length = 124
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F KYGP+ ++ + PPG+AF+EFED RDAEDA+R DG
Sbjct: 13 VYVGNLGSSASKHEIESAFGKYGPLRNV--WVARNPPGFAFVEFEDKRDAEDAVRSLDGT 70
Query: 69 NFDGYRLRVELAHG 82
G R+RVE++ G
Sbjct: 71 RCCGTRIRVEMSSG 84
>gi|118778182|ref|XP_308500.3| AGAP007325-PA [Anopheles gambiae str. PEST]
gi|116132260|gb|EAA04307.3| AGAP007325-PA [Anopheles gambiae str. PEST]
Length = 132
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F KYGP+ ++ + PPG+AF+EFED RDAEDA+R DG
Sbjct: 13 VYVGNLGSSASKHEIESAFGKYGPLRNV--WVARNPPGFAFVEFEDKRDAEDAVRSLDGT 70
Query: 69 NFDGYRLRVELAHG 82
G R+RVE++ G
Sbjct: 71 RCCGTRIRVEMSSG 84
>gi|380012958|ref|XP_003690539.1| PREDICTED: uncharacterized protein LOC100863202 [Apis florea]
Length = 193
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
S +YVGNL E+E F KYGP+ ++ + PPG+AF+EFED RDAEDA+RG
Sbjct: 41 SCKVYVGNLGNSASKHEIESAFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRGL 98
Query: 66 DGYNFDGYRLRVEL 79
DG G R+RVE+
Sbjct: 99 DGTRCCGTRVRVEM 112
>gi|328777414|ref|XP_003249337.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Apis
mellifera]
Length = 177
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
S +YVGNL E+E F KYGP+ ++ + PPG+AF+EFED RDAEDA+RG
Sbjct: 41 SCKVYVGNLGNSASKHEIESAFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRGL 98
Query: 66 DGYNFDGYRLRVEL 79
DG G R+RVE+
Sbjct: 99 DGTRCCGTRVRVEM 112
>gi|321469591|gb|EFX80571.1| hypothetical protein DAPPUDRAFT_304081 [Daphnia pulex]
Length = 162
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+E+ F KYG + ++ + PPG+AF+EFED RDAEDA+R DG
Sbjct: 14 VYVGNLGSNAARGEIEEAFSKYGTLRNV--WVARNPPGFAFVEFEDPRDAEDAVRALDGV 71
Query: 69 NFDGYRLRVELAHGGRR 85
G R++VE++ G RR
Sbjct: 72 RLCGARVKVEMSTGKRR 88
>gi|221483766|gb|EEE22078.1| arginine/serine-rich splicing factor, putative [Toxoplasma gondii
GT1]
Length = 184
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M + R +Y+G + DT E+E +F KYG I + + PPG+AFL F+DYRDA+D
Sbjct: 1 MDDQEGRKVYIGGIEADTTTEELESIFGKYGTISTV--WVARNPPGFAFLTFDDYRDAKD 58
Query: 61 AIRGRDGYNFDGYRLRVELAHG 82
A+ DGY + G +RVE+A G
Sbjct: 59 AVAELDGYRYRGKPIRVEIARG 80
>gi|340711199|ref|XP_003394166.1| PREDICTED: RNA-binding protein 1-like [Bombus terrestris]
Length = 161
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
S +YVGNL E+E F KYGP+ ++ + +PPG+AF+EFED RDAEDA+RG
Sbjct: 10 SCKVYVGNLGNSASKHEIESAFSKYGPLRNV--WVARKPPGFAFVEFEDPRDAEDAVRGL 67
Query: 66 DGYNFDGYRLRVEL 79
DG G R+RVE+
Sbjct: 68 DGTRCCGTRVRVEM 81
>gi|328777412|ref|XP_397274.4| PREDICTED: serine/arginine-rich splicing factor 7-like [Apis
mellifera]
Length = 193
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
S +YVGNL E+E F KYGP+ ++ + PPG+AF+EFED RDAEDA+RG
Sbjct: 41 SCKVYVGNLGNSASKHEIESAFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRGL 98
Query: 66 DGYNFDGYRLRVEL 79
DG G R+RVE+
Sbjct: 99 DGTRCCGTRVRVEM 112
>gi|402591118|gb|EJW85048.1| hypothetical protein WUBG_04041 [Wuchereria bancrofti]
Length = 141
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VG LP D E+E+ F KYG I + L RPPG+AF+EFED RDAEDA++G DG
Sbjct: 12 VFVGGLPNDASSEELEEAFSKYGRIKKVWLA--RRPPGFAFIEFEDSRDAEDAVKGLDGT 69
Query: 69 NFDGYRLRVELAH 81
G R RVE +H
Sbjct: 70 RICGVRPRVEFSH 82
>gi|324509930|gb|ADY44158.1| Splicing factor, arginine/serine-rich 6 [Ascaris suum]
Length = 136
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VG LP D +E+E+ F +YGPI + + RPPG+AF+EFED RDA+DA++ +G
Sbjct: 17 VFVGGLPHDATTQELEEAFGRYGPIRKV--WMARRPPGFAFIEFEDSRDADDAVKALNGA 74
Query: 69 NFDGYRLRVELAH 81
G R RVE++H
Sbjct: 75 RICGVRPRVEISH 87
>gi|357623469|gb|EHJ74606.1| rbp1-like RNA-binding protein PB [Danaus plexippus]
Length = 156
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+E +F KYG I ++ + PPG+AF+E+ED RDAED++RG DG
Sbjct: 13 VYVGNLGTNASKYEIEKVFSKYGSIRNV--WVARNPPGFAFVEYEDPRDAEDSVRGLDGT 70
Query: 69 NFDGYRLRVELAHG 82
G R+RVE+++G
Sbjct: 71 RCCGTRIRVEMSNG 84
>gi|346473189|gb|AEO36439.1| hypothetical protein [Amblyomma maculatum]
Length = 141
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F K+GP+ ++ + PPG+AF+EFED RDAEDA R DG
Sbjct: 9 VYVGNLGSGAAKHEIEAAFTKFGPLRNV--WVARNPPGFAFVEFEDSRDAEDACRALDGS 66
Query: 69 NFDGYRLRVELAH 81
G R+RVE++H
Sbjct: 67 RLCGTRVRVEMSH 79
>gi|242089645|ref|XP_002440655.1| hypothetical protein SORBIDRAFT_09g004685 [Sorghum bicolor]
gi|241945940|gb|EES19085.1| hypothetical protein SORBIDRAFT_09g004685 [Sorghum bicolor]
Length = 241
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 84/246 (34%), Positives = 110/246 (44%), Gaps = 42/246 (17%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
LYVG + TR ++ EDLF KYG + ++DLK + F+EF D RDA+DA DG
Sbjct: 2 LYVGQISPHTRTQDHEDLFSKYGRLRNVDLKRD-----FGFVEFSDPRDADDARHDLDGR 56
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
FDG + VE A G RR G GV + V G P +
Sbjct: 57 RFDGSYIIVEFARGARR--------------GPGGVP------LDVRGPPFPGRCYNCG- 95
Query: 129 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDS 188
M C + +RDR G + + + K + + L R ++SRS
Sbjct: 96 -MDGWVRDCKADDWRDRCFRCGELGHIER-NCKNSPKDLKRGR---SYSRSPSPHHGKGR 150
Query: 189 RRSYSRSPSRSPYYSRSR----SRSPYYSRSRSPSRSWSYSPRSRSYSPRGKYSRRSPSL 244
RSYS+ S SP++ R R SRSP + R R RSWSY SRS SPR K+ L
Sbjct: 151 GRSYSK--SLSPHHGRGRGRSYSRSPSHCRGR--GRSWSY---SRSLSPRNKFKADGEEL 203
Query: 245 SPARSA 250
P S
Sbjct: 204 PPRTSG 209
>gi|380023824|ref|XP_003695711.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Apis
florea]
Length = 166
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
S +YVGNL E+E F KYGP+ ++ + PPG+AF+EFED RDAEDA+RG
Sbjct: 14 SCKVYVGNLGNSASKHEIESAFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRGL 71
Query: 66 DGYNFDGYRLRVEL 79
DG G R+RVE+
Sbjct: 72 DGTRCCGTRVRVEM 85
>gi|194767988|ref|XP_001966096.1| GF19500 [Drosophila ananassae]
gi|190622981|gb|EDV38505.1| GF19500 [Drosophila ananassae]
Length = 179
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E+ F KYGP+ ++ + PPG+AF+EFED RDAEDA RG DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRGLDGT 70
Query: 69 NFDGYRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|350405857|ref|XP_003487573.1| PREDICTED: RNA-binding protein 1-like [Bombus impatiens]
Length = 162
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
S +YVGNL E+E F KYGP+ ++ + +PPG+AF+EFED RDAEDA+RG
Sbjct: 10 SCKVYVGNLGNSASKHEIESAFSKYGPLRNV--WVARKPPGFAFVEFEDPRDAEDAVRGL 67
Query: 66 DGYNFDGYRLRVEL 79
DG G R+RVE+
Sbjct: 68 DGTRCCGTRVRVEM 81
>gi|189241002|ref|XP_968789.2| PREDICTED: similar to conserved hypothetical protein [Tribolium
castaneum]
Length = 200
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
S +YVG+L +E+ED F YGP+ ++ + PPG+AF+EFED RDAEDAIRG
Sbjct: 6 SDCKVYVGDLGNSASKQELEDAFRYYGPLRNV--WVARNPPGFAFVEFEDARDAEDAIRG 63
Query: 65 RDGYNFDGYRLRVELAHG 82
DG G R RVE+++G
Sbjct: 64 LDGRTICGRRARVEMSNG 81
>gi|270012981|gb|EFA09429.1| hypothetical protein TcasGA2_TC010640 [Tribolium castaneum]
Length = 202
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
S +YVG+L +E+ED F YGP+ ++ + PPG+AF+EFED RDAEDAIRG
Sbjct: 6 SDCKVYVGDLGNSASKQELEDAFRYYGPLRNV--WVARNPPGFAFVEFEDARDAEDAIRG 63
Query: 65 RDGYNFDGYRLRVELAHG 82
DG G R RVE+++G
Sbjct: 64 LDGRTICGRRARVEMSNG 81
>gi|242247509|ref|NP_001156211.1| serine/arginine-rich splicing factor 3-like [Acyrthosiphon pisum]
gi|239790491|dbj|BAH71803.1| ACYPI006320 [Acyrthosiphon pisum]
Length = 152
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
S +Y+GNL + E+E F KYGP+ + I PPG+AF+EFED RDAEDA+RG
Sbjct: 8 QSCKVYIGNLGQNGTKHEIEASFTKYGPLKNT--WIARNPPGFAFVEFEDPRDAEDAVRG 65
Query: 65 RDGYNFDGYRLRVELA 80
DG G R+RVE++
Sbjct: 66 LDGTRICGVRVRVEMS 81
>gi|429859457|gb|ELA34237.1| pre-mRNA splicing factor [Colletotrichum gloeosporioides Nara gc5]
Length = 328
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 76/155 (49%), Gaps = 11/155 (7%)
Query: 22 EVEDLFYKYGP--IVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVEL 79
+VE F +G I +I L G+ F+E++D DA D + G +F G RL V+
Sbjct: 26 DVEAHFATHGTGEITEIKLM-----NGFGFIEYKDAMDARDVVPAFHGSDFMGERLTVQF 80
Query: 80 AHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCF 138
A G R + R ++ TGLP+ SWQDLKD R++ DV +
Sbjct: 81 ARGTRHREGGNGGGFNNERAPPRPRRTPHRMQI--TGLPTDTSWQDLKDFARQSSLDVVY 138
Query: 139 SQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
S+ RD G G V++ + D++ A+ KLD EF+
Sbjct: 139 SETGRDGNG-RGFVEFETAADLRTAVEKLDGREFK 172
>gi|262401189|gb|ACY66497.1| splicing factor arginine/serine-rich 7 [Scylla paramamosain]
Length = 119
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M S +YVG+L +E+E+ F YGP+ ++ + PPG+AF+EFED RDAED
Sbjct: 1 MPSSLDCKVYVGDLGSGASKQELEEAFSYYGPLRNV--WVARNPPGFAFVEFEDVRDAED 58
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRH 86
A+RG DG G R+RVEL+ G R+
Sbjct: 59 AVRGLDGRTICGRRVRVELSTGKSRN 84
>gi|112983196|ref|NP_001037604.1| RNA-binding protein 1 [Bombyx mori]
gi|95115204|gb|ABF55968.1| Rbp1 [Bombyx mori]
Length = 156
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 59/92 (64%), Gaps = 6/92 (6%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
S +YVGNL + E+E +F KYG I ++ + PPG+AF+EFED RDAED++RG
Sbjct: 10 SCKVYVGNLGTNASKYEIEKIFSKYGNIRNV--WVARNPPGFAFVEFEDPRDAEDSVRGL 67
Query: 66 DGYNFDGYRLRVELAHG----GRRHSSSMDRY 93
DG G R+RVE+++G RR+ ++D Y
Sbjct: 68 DGTRCCGTRIRVEMSNGRTRRDRRYFLNVDSY 99
>gi|224068024|ref|XP_002302651.1| predicted protein [Populus trichocarpa]
gi|222844377|gb|EEE81924.1| predicted protein [Populus trichocarpa]
Length = 236
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 100/222 (45%), Gaps = 27/222 (12%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
+R ++VGN +TR ++E LF KYG + +D+K G+AF+ FED RDA DA+RG
Sbjct: 2 ARPVFVGNFEHETRQSDLERLFSKYGRVERVDMK-----SGFAFVYFEDDRDAADAVRGL 56
Query: 66 DG--YNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGL-PSSAS 122
D + +D RL VE A G R + G ++R + V P
Sbjct: 57 DNIPFGYDRRRLSVEWARGER---------GRHRDGPRSTANQRPTKTLFVINFDPIHTR 107
Query: 123 WQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVR 182
+D+K H R G+V ++ R+ V + + +D A+ ++ +
Sbjct: 108 VEDIKRHFERYGEVLHVRIRRN----FAFVQFETQEDATKALECTHMTKILDRVVSVEYA 163
Query: 183 VREYDSRRSYSRSPSRSPYYSRS------RSRSPYYSRSRSP 218
+R+ R SP R Y RS R SP Y R+RSP
Sbjct: 164 LRDDSERGDRYDSPRRGSYNGRSPSPVYRRRPSPDYVRARSP 205
>gi|313241655|emb|CBY33880.1| unnamed protein product [Oikopleura dioica]
Length = 247
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 78/180 (43%), Gaps = 44/180 (24%)
Query: 20 MREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVEL 79
M +VE+ F +G I I+LK PGY F+ FED RDAE+A R DG G ++ VE+
Sbjct: 1 MSDVEEFFKGFGHIKSINLK-----PGYGFVVFEDRRDAEEAARDLDGKRMCGEKVDVEM 55
Query: 80 AHGGRRHSSSMDRYSSYSSGGSRGVSR---------------------------RSDYRV 112
A G S YS G R + R R D +
Sbjct: 56 AKGPGNKSR-----KEYSRSGDRPIVRDTRSGFNGRRRSRSRDRGFSSRKKEPYRDDATI 110
Query: 113 LVTGLPSSASWQDLKDHMRRAG----DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLD 168
+T L + SWQDLKD +R D C + + DR V + S DM+ A+ ++D
Sbjct: 111 SITNLSTRCSWQDLKDFIRDNARVEPDFCDAHKYEDR---IATVSFRSSGDMRKAVDRMD 167
>gi|195401867|ref|XP_002059532.1| GJ14774 [Drosophila virilis]
gi|194147239|gb|EDW62954.1| GJ14774 [Drosophila virilis]
Length = 155
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E+ F KYGP+ ++ + PPG+AF+EFED RDAEDA RG DG
Sbjct: 13 VYVGNLGSSASKHEIENAFSKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRGLDGT 70
Query: 69 NFDGYRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|195438960|ref|XP_002067399.1| GK16401 [Drosophila willistoni]
gi|194163484|gb|EDW78385.1| GK16401 [Drosophila willistoni]
Length = 176
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E+ F KYGP+ ++ + PPG+AF+EFED RDAEDA RG DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRGLDGT 70
Query: 69 NFDGYRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|326428383|gb|EGD73953.1| hypothetical protein PTSG_05647 [Salpingoeca sp. ATCC 50818]
Length = 372
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 80/176 (45%), Gaps = 25/176 (14%)
Query: 2 SSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPR--PPGYAFLEFEDYRDAE 59
S T+YVG LP + ++DL K GP+ +++ G + F DA+
Sbjct: 162 SGEMGSTVYVGGLPYSMTWQHLKDLMRKAGPVEHVEVMYDGNGMSKGCGLVRFATAEDAQ 221
Query: 60 DAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPS 119
+AIR + DG L V R + D+Y RGVS V V LP
Sbjct: 222 NAIRMFNEQPLDGRNLLV-------RVDAEADKYR-------RGVS------VHVGNLPW 261
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRDRGGMT---GIVDYTSYDDMKYAIRKLDRSEF 172
+W++LKD MR AG+V ++V D G++ GIV + S D AI + + E+
Sbjct: 262 EVTWRELKDLMRPAGEVIHAEVMHDNNGLSRGWGIVRFVSADGANAAIEQFNEFEW 317
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 88/213 (41%), Gaps = 29/213 (13%)
Query: 8 TLYVGNLPGDTRMREVEDLFYKYGPIV--DIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
++YVGNL T +++ + G + D+ + R G + F D A AI
Sbjct: 59 SVYVGNLSWSTTWPRLKEFMSEIGHVAFADVLRDMNGRSKGCGIVVFGDVETANRAIAEM 118
Query: 66 DGYNFDGYRLRVELAHGGRR------------HSSSMDRYSSYSSGGSRGVSRRSDYRVL 113
G DG ++ V R H S + +++S G G + V
Sbjct: 119 SGRELDGRQIMVREDREAHRFPRRSARPPAPMHRPSTNYTATFS--GEMGST------VY 170
Query: 114 VTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT---GIVDYTSYDDMKYAIRKLDRS 170
V GLP S +WQ LKD MR+AG V +V D GM+ G+V + + +D + AIR +
Sbjct: 171 VGGLPYSMTWQHLKDLMRKAGPVEHVEVMYDGNGMSKGCGLVRFATAEDAQNAIRMFNEQ 230
Query: 171 EF--RNAFSRSYVRVREYDSRRSYSRSPSRSPY 201
RN R +Y RR S P+
Sbjct: 231 PLDGRNLLVRVDAEADKY--RRGVSVHVGNLPW 261
>gi|442757015|gb|JAA70666.1| Putative alternative splicing factor srp20/9g8 rrm superfamily
[Ixodes ricinus]
Length = 141
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F K+GP+ ++ + PPG+AF+EFED RDAEDA R DG
Sbjct: 9 VYVGNLGSGAAKHEIEAAFTKFGPLRNV--WVARNPPGFAFVEFEDSRDAEDACRALDGS 66
Query: 69 NFDGYRLRVELAH 81
G R+RVE++H
Sbjct: 67 RLCGTRVRVEMSH 79
>gi|449432024|ref|XP_004133800.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like [Cucumis
sativus]
gi|449477961|ref|XP_004155176.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like [Cucumis
sativus]
Length = 253
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 108/244 (44%), Gaps = 30/244 (12%)
Query: 7 RTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRD 66
R ++VGN DTR E+E LF KYG + ID+K G+AF+ FED RDAEDAIRG D
Sbjct: 2 RPIFVGNFGYDTRQSELERLFSKYGRVERIDMK-----SGFAFVYFEDERDAEDAIRGLD 56
Query: 67 G--YNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGL-PSSASW 123
+ +D RL VE A G R + G ++R + V P
Sbjct: 57 NLPFGYDRRRLSVEWARGER---------GRHRDGSKSMANQRPTKTLFVINFDPIRTRV 107
Query: 124 QDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRN-AFSRSYVR 182
+D++ H G V ++ R+ V + + +D A+ S+ + S Y
Sbjct: 108 RDIERHFEPYGKVLNVRIRRN----FAFVQFETQEDATKALECTHMSKILDRVVSVEYAL 163
Query: 183 VREYDSRRSYSRSPSRSPYYSRS------RSRSPYYSRSRSPSRSWSYSPRSRSYSPRGK 236
+ + + SP R+ Y R RS SP + R SP ++SP Y+ G
Sbjct: 164 RDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYN--GP 221
Query: 237 YSRR 240
Y RR
Sbjct: 222 YERR 225
>gi|353241704|emb|CCA73501.1| related to pre-mrna splicing factor srp55 [Piriformospora indica
DSM 11827]
Length = 194
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 94/187 (50%), Gaps = 22/187 (11%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
SR LYVG LP D +V F + +D +I G+ F+EF+ D + A+R
Sbjct: 2 SRRLYVGKLPPDVNSEDVRRFFEDEARVKVVDCRIMT---GFGFIEFDSSEDMDTALR-L 57
Query: 66 DGYNFDGYRLRVELAHGG--RRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASW 123
DG++F G + V++A RR R SSG +GV+ V+V+ + SW
Sbjct: 58 DGHDFQGQPILVQVAREKPPRREPPREMR----SSGRRQGVT------VIVSNVSRDVSW 107
Query: 124 QDLKDHMRRA-GDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVR 182
QDLKD R A G V FS + RD GI++Y + ++ + A+R+LD E R V
Sbjct: 108 QDLKDFGREAGGGVIFSDIDRDVPNQ-GILEYYTAEEAERAVRELDGRELRG----HTVT 162
Query: 183 VREYDSR 189
+R DSR
Sbjct: 163 LRLQDSR 169
>gi|313232321|emb|CBY09430.1| unnamed protein product [Oikopleura dioica]
Length = 344
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 84/167 (50%), Gaps = 11/167 (6%)
Query: 8 TLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDG 67
T+++G+LP + V+D F +YGP+ I L + F++F +DA++A++ DG
Sbjct: 8 TVWMGDLPPGIKRGHVKDFFEEYGPLGGIRL-----MNNFGFIDFRKKKDAKEAVKELDG 62
Query: 68 YNFDGYRLRVELAHG---GRRHSSSMDRYSSYSSGGSRGVSRR---SDYRVLVTGLPSSA 121
G R+R+E + G ++ D + GG + R + Y + V+ L +
Sbjct: 63 KKLKGARIRLEHSDGPGGSKKKGEDYDAVNFPPIGGQSSMYERPYRTKYTISVSNLSTRF 122
Query: 122 SWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLD 168
SW DLK+ MRRAG+V ++ G G V + + A++KL+
Sbjct: 123 SWADLKNFMRRAGEVTYTDAHVRSGEGNGEVCFKDRKGLYRAMQKLN 169
>gi|403182431|gb|EJY57381.1| AAEL017082-PA [Aedes aegypti]
Length = 243
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 54/85 (63%), Gaps = 7/85 (8%)
Query: 1 MSSRSSR-----TLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDY 55
MS + SR +YVG L + +E+ED F YGP+ ++ + PPG+AF+EF+D
Sbjct: 1 MSKKMSRYPHDAKVYVGELGNNASKQEIEDAFSYYGPLRNV--WVARNPPGFAFVEFDDA 58
Query: 56 RDAEDAIRGRDGYNFDGYRLRVELA 80
RDAED++RG DG G R+RVEL+
Sbjct: 59 RDAEDSVRGLDGRTVCGRRVRVELS 83
>gi|307212780|gb|EFN88451.1| RNA-binding protein 1 [Harpegnathos saltator]
Length = 101
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
S +YVGNL E+E F K+GP+ ++ + PPG+AF+EFED RDAEDA+RG
Sbjct: 10 SCKVYVGNLGSSASKHEIESAFSKFGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRGL 67
Query: 66 DGYNFDGYRLRVEL 79
DG G R+RVE+
Sbjct: 68 DGTRCCGTRVRVEM 81
>gi|291409640|ref|XP_002721124.1| PREDICTED: splicing factor SRp55 homolog [Oryctolagus cuniculus]
Length = 284
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 13/105 (12%)
Query: 70 FDGY--RLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLK 127
F GY L V+L +G RR +S D+Y G R++YR++V L S SWQDLK
Sbjct: 22 FSGYGRLLEVDLKNGSRR-TSGRDKY---------GPPVRTEYRLIVENLSSRCSWQDLK 71
Query: 128 DHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
D MR+AG+V ++ ++R G++++ SY DMK A+ KLD +E
Sbjct: 72 DFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 115
>gi|345486250|ref|XP_003425431.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Nasonia
vitripennis]
gi|345486252|ref|XP_003425432.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Nasonia
vitripennis]
Length = 163
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
S +YVGNL E+E F KYGP+ ++ + PPG+AF+EFED RDAEDA+RG
Sbjct: 11 SCKVYVGNLGSSASKHEIESAFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRGL 68
Query: 66 DGYNFDGYRLRVEL 79
DG G R+RVE+
Sbjct: 69 DGTRCCGTRVRVEM 82
>gi|344229776|gb|EGV61661.1| hypothetical protein CANTEDRAFT_135600 [Candida tenuis ATCC 10573]
Length = 228
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 85/177 (48%), Gaps = 28/177 (15%)
Query: 3 SRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAI 62
+ SR ++V L T E+E+ F G I ++ + GYAF+ FE+ A+ A+
Sbjct: 31 ALESRKVFVRPLDYQTPTEEIEEFFAPAGAIAEVQMMR-----GYAFVSFEEDGAAQKAV 85
Query: 63 RGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSAS 122
+ +F G L VELA R R YRV VT LP +
Sbjct: 86 DEFNNTDFHGQPLIVELAR-------------------ERKEDTRGKYRVKVTNLPDGTA 126
Query: 123 WQDLKDHMR-RAGDV-CFSQVFR--DRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNA 175
WQD KD +R + G F++V+R D G + G +++ + D+++ AI L+ SEF+ A
Sbjct: 127 WQDFKDFVRDKTGTTPTFAKVYRDYDSGEVIGALEFGARDELEGAIPVLNGSEFQGA 183
>gi|308493016|ref|XP_003108698.1| hypothetical protein CRE_10826 [Caenorhabditis remanei]
gi|308248438|gb|EFO92390.1| hypothetical protein CRE_10826 [Caenorhabditis remanei]
Length = 277
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP D +E+E++F ++G I + + RPPG+AF+E++D RDAEDA+R DG
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIRKV--WVARRPPGFAFVEYDDVRDAEDAVRALDGS 62
Query: 69 NFDGYRLRVELAHG 82
G R RVEL+ G
Sbjct: 63 RICGVRARVELSTG 76
>gi|71034173|ref|XP_766728.1| hypothetical protein [Theileria parva strain Muguga]
gi|68353685|gb|EAN34445.1| hypothetical protein TP01_1207 [Theileria parva]
Length = 543
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 88/179 (49%), Gaps = 20/179 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++GNL GD E+ F +GPI ID + +AF+++ +DAE AIR
Sbjct: 362 IFIGNLSGDVTQEELTSKFSSFGPINRIDFR-----RKFAFIDYVRSKDAESAIREMHNK 416
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
G L+V+ + SS D S+ ++ V+ L S SWQDLKD
Sbjct: 417 FIWGSYLKVQPHIDQNKKLSSRDPKPSF--------------QITVSNLDQSVSWQDLKD 462
Query: 129 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLD-RSEFRNAFSRSYVRVREY 186
R+AGDV ++ + G+++YT+ + ++ A+++L+ + N +++ + E+
Sbjct: 463 FGRQAGDVHYTSIIIKGDRRFGLIEYTNEESVQNAMKELNGKKIVDNTLELTHIPMSEF 521
>gi|190348431|gb|EDK40880.2| hypothetical protein PGUG_04978 [Meyerozyma guilliermondii ATCC
6260]
Length = 251
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 66/134 (49%), Gaps = 23/134 (17%)
Query: 46 GYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVS 105
GYAF+ FE+ D A+ +G FDG L+VE A R
Sbjct: 3 GYAFVTFENSEDTAKAVETMNGTEFDGQTLQVEFAK-------------------ERKED 43
Query: 106 RRSDYRVLVTGLPSSASWQDLKDHMRRAGDV--CFSQVFRD--RGGMTGIVDYTSYDDMK 161
R +RV VT LP +WQD KD +R + F++VFRD G + G +++ S +++
Sbjct: 44 TRGQFRVKVTNLPDGTAWQDFKDFVRDKTESTPTFAKVFRDYESGEVIGALEFGSREELD 103
Query: 162 YAIRKLDRSEFRNA 175
A+ LD++EF++
Sbjct: 104 KAVPLLDKAEFQDV 117
>gi|242014601|ref|XP_002427975.1| RNA-binding protein, putative [Pediculus humanus corporis]
gi|212512474|gb|EEB15237.1| RNA-binding protein, putative [Pediculus humanus corporis]
Length = 106
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
S +YVGNL + E+E F KYGP+ ++ + PPG+AF+EFED RDAED++RG
Sbjct: 10 SCKVYVGNLGSNASKHEIEAAFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDSVRGL 67
Query: 66 DGYNFDGYRLRVEL 79
DG G R+RVE+
Sbjct: 68 DGTRCCGTRIRVEM 81
>gi|391333364|ref|XP_003741086.1| PREDICTED: serine/arginine-rich splicing factor 3-like
[Metaseiulus occidentalis]
Length = 162
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+GNL +VE +F KYG + ++ + PPG+AF+EFED RDAEDA+R DG
Sbjct: 12 VYIGNLATHASRHDVESVFSKYGNLRNV--WVARNPPGFAFVEFEDSRDAEDAVRAVDGS 69
Query: 69 NFDGYRLRVELAHG 82
G R++ E++HG
Sbjct: 70 RICGSRVKCEMSHG 83
>gi|242063870|ref|XP_002453224.1| hypothetical protein SORBIDRAFT_04g001910 [Sorghum bicolor]
gi|241933055|gb|EES06200.1| hypothetical protein SORBIDRAFT_04g001910 [Sorghum bicolor]
gi|448878270|gb|AGE46098.1| arginine/serine-rich splicing factor RS34 [Sorghum bicolor]
Length = 295
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 100/223 (44%), Gaps = 38/223 (17%)
Query: 7 RTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRD 66
R ++ GNL D R+ EVE LF KYG + +DLK G+AF+ ED RDAEDAI D
Sbjct: 2 RPVFCGNLDYDVRISEVERLFGKYGRVERVDLKT-----GFAFVYMEDERDAEDAIHRLD 56
Query: 67 GYNF--DGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRV-------LVTGL 117
G +F G R+RVE R + G RG SRRS + ++
Sbjct: 57 GIDFGRKGRRIRVEWTKEDR-------------TAGRRGSSRRSPTQARPTKTLFVINFD 103
Query: 118 PSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFS 177
P + +DL+ H + G V ++ ++ V + +D A+ + S F +
Sbjct: 104 PINTRIRDLERHFDKYGRVANVRIKKN----FAFVQFEVQEDATRALEGTNGSHFMDRVI 159
Query: 178 RSYVRVREYDSR--RSYSRSPSRSPYYSRSRSRSPYYSRSRSP 218
+R+ D + R SP R R R RSP RS SP
Sbjct: 160 SVEYALRDDDEKGERGNGYSPDR-----RGRERSPGRRRSPSP 197
>gi|440471047|gb|ELQ40084.1| hypothetical protein OOU_Y34scaffold00462g38 [Magnaporthe oryzae
Y34]
Length = 905
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 84/194 (43%), Gaps = 25/194 (12%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLF--YKYGPIVDIDLKIPPRPPGYAFLEFEDYRDA 58
M+ SS LY+GNLP +V F + G I +I L G+ F+E++D DA
Sbjct: 584 MTEVSSTRLYLGNLPRSATKEDVSTHFSSHGTGKITEIKLM-----NGFGFIEYDDPLDA 638
Query: 59 EDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVS--------RRSDY 110
D + G F G RL V+ A G R GG G RR+ +
Sbjct: 639 RDVVPAFHGSTFMGERLTVQFARGTRNREGGSGGGGGGGGGGGGGYGGERSGPRPRRTAF 698
Query: 111 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRS 170
R+ ++GLP SWQ DV +S+ R+ G G V++ + D+ A+ LD
Sbjct: 699 RMQISGLPVDTSWQ---------LDVVYSETGRNNNG-EGFVEFETAADLASAVEALDGK 748
Query: 171 EFRNAFSRSYVRVR 184
EF++ R +
Sbjct: 749 EFKDKIVRCVANTQ 762
>gi|344302325|gb|EGW32630.1| hypothetical protein SPAPADRAFT_61691 [Spathaspora passalidarum
NRRL Y-27907]
Length = 291
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 82/172 (47%), Gaps = 28/172 (16%)
Query: 6 SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR 65
S L+V + D ++E+ F G +VD+ L G+AF+ F++ DA A+
Sbjct: 15 STQLFVRPIGFDVPREQLEEHFAPAGHVVDVQLM-----RGFAFVRFDNEEDATRAVETL 69
Query: 66 DGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQD 125
+ FDG RL VE A R R YRV +T L +WQD
Sbjct: 70 NDSEFDGQRLLVEYAK-------------------ERKEDTRGKYRVKLTNLEDGTAWQD 110
Query: 126 LKDHMRRAGDV--CFSQVFR--DRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
+KD +R D + +VFR D + G ++++S ++++ AI LD++EFR
Sbjct: 111 IKDFVRDKTDSEPSYVKVFRNYDTNEIVGALEFSSAEELEKAIPLLDKAEFR 162
>gi|170054825|ref|XP_001863306.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167874993|gb|EDS38376.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 246
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 48/72 (66%), Gaps = 2/72 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG L + +E+ED F YGP+ ++ + PPG+AF+EFED RDAED++RG DG
Sbjct: 10 VYVGELGNNASKQEIEDAFSYYGPLRNV--WVARNPPGFAFVEFEDARDAEDSVRGLDGR 67
Query: 69 NFDGYRLRVELA 80
G R RVEL+
Sbjct: 68 TICGRRARVELS 79
>gi|389582698|dbj|GAB65435.1| pre-mRNA splicing factor, partial [Plasmodium cynomolgi strain B]
Length = 450
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 46/67 (68%), Gaps = 4/67 (5%)
Query: 107 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 166
R+++R++++ LP S WQ LKD MR+ GDV ++ + R +G +V++ + DDM YAI K
Sbjct: 16 RTEHRIIISNLPESCKWQHLKDAMRQCGDVGYANIERGKG----VVEFINRDDMLYAIEK 71
Query: 167 LDRSEFR 173
D SEF+
Sbjct: 72 FDGSEFK 78
>gi|307206112|gb|EFN84192.1| Splicing factor, arginine/serine-rich 7 [Harpegnathos saltator]
Length = 127
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG+L + +E+ED F YG + ++ + PPG+AF+EFED RDAEDA+RG DG
Sbjct: 10 VYVGDLGSNASKQELEDAFSYYGSLRNV--WVARHPPGFAFVEFEDPRDAEDAVRGLDGR 67
Query: 69 NFDGYRLRVELAHGGR 84
G R RVEL++G R
Sbjct: 68 TICGRRARVELSNGKR 83
>gi|403221560|dbj|BAM39693.1| uncharacterized protein TOT_010001366 [Theileria orientalis strain
Shintoku]
Length = 458
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 91/188 (48%), Gaps = 21/188 (11%)
Query: 1 MSSRSSRT-LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAE 59
+ SR +T +++GNL G+ E+ F +GPI ID + +AF++F +DAE
Sbjct: 239 LPSRYHKTKVFIGNLSGEVTQDELTAKFSSFGPINRIDFRR-----KFAFVDFVRSKDAE 293
Query: 60 DAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPS 119
AIR G L+V+ H + S+ + Y++ VT L
Sbjct: 294 TAIREMHNKLIWGSWLKVQP------HIEQQKKLSAREP--------KPGYQITVTNLDQ 339
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSR 178
S SWQDLKD R+AG+V ++ + G++++T+ + ++ A++ L+ + N
Sbjct: 340 SVSWQDLKDFARQAGEVNYASIIIKGNKRFGLIEFTNDESVQNALKDLNGKKIDVNKLEL 399
Query: 179 SYVRVREY 186
+V V E+
Sbjct: 400 IHVPVSEF 407
>gi|395854494|ref|XP_003799724.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Otolemur
garnettii]
Length = 179
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 77/142 (54%), Gaps = 15/142 (10%)
Query: 96 YSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYT 155
+ G G S +D + V LP SWQDLKDH R AGDVC++ +++D T +V++
Sbjct: 38 WGGGVIHGPSWNNDCSIFVGNLPPGGSWQDLKDHPREAGDVCYADIYQD---TTSVVEFV 94
Query: 156 SYDDMKYAIRKLDRSEFR-NAFSRSYVRVREYDSRRSYSRSPSRSPYYS--RSRSRSPYY 212
+D+ YAI +LD ++FR + +Y++V + RSP Y S+S S
Sbjct: 95 QKEDITYAIEELDNTKFRSHEGETAYIQV---------NVDGPRSPSYGRSPSQSHSSSR 145
Query: 213 SRSRSPSRSWSYSPRSRSYSPR 234
S SR S+S SY+PR SPR
Sbjct: 146 SGSRGNSKSPSYAPRRSRASPR 167
>gi|195451607|ref|XP_002072997.1| GK13897 [Drosophila willistoni]
gi|194169082|gb|EDW83983.1| GK13897 [Drosophila willistoni]
Length = 140
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E+ F KYGP+ ++ + PPG+AF+EFED RDAEDA R DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLKNV--WVARNPPGFAFVEFEDRRDAEDATRALDGT 70
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRG 103
G R+RVE++ G R S S +G +RG
Sbjct: 71 RCCGTRIRVEMSSGRSRERSRRGGGQSGEAGSNRG 105
>gi|294653211|gb|ADF28513.1| rbp1-like RNA-binding protein PB [Pelinobius muticus]
Length = 134
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+GNL ++E +F +YGPI ++ + PPG+AF+EFED RDAEDA++ DG
Sbjct: 13 VYIGNLGSRATKDDIEAVFSRYGPIRNV--WVARNPPGFAFVEFEDSRDAEDAVKALDGT 70
Query: 69 NFDGYRLRVELAH 81
G R+RVE++H
Sbjct: 71 RICGARVRVEMSH 83
>gi|313233455|emb|CBY24570.1| unnamed protein product [Oikopleura dioica]
Length = 583
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 76/166 (45%), Gaps = 31/166 (18%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M + ++++GNL R ++E F YG + DI LK GY F++F+D DA+D
Sbjct: 406 MGAGEMHSVFIGNLSDHARHEDIEKFFKGYGSLRDISLK-----GGYGFVQFKDKYDAKD 460
Query: 61 AIRGRDGYNFDGYRLRVELAH------------------------GGRRHSSSMDRYSSY 96
A++ DG G ++R+EL++ R +S R S Y
Sbjct: 461 AVQDLDGKEICGQKVRIELSNGGRDRTRRGRDSYSRSRSRSRDNSRYSRSTSKSPRRSFY 520
Query: 97 SSGGSR--GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQ 140
R G +++ Y + + L SWQDLKD RR G+V + +
Sbjct: 521 ERTAYRKYGAPKKTKYAIEIENLSERVSWQDLKDFFRRVGEVSYGE 566
>gi|193636560|ref|XP_001952396.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Acyrthosiphon pisum]
gi|328724544|ref|XP_003248180.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Acyrthosiphon pisum]
Length = 181
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG+L +++ED F YG I ++ + PPG+AF+EFED RDAEDA+RG DG
Sbjct: 17 IYVGDLGSSASKQDLEDAFSYYGSIRNV--WVARNPPGFAFVEFEDPRDAEDAVRGLDGR 74
Query: 69 NFDGYRLRVELAHGGRRHSS 88
+ G R+RVEL++ G R +
Sbjct: 75 SICGRRVRVELSNAGSRKGA 94
>gi|224088597|ref|XP_002308490.1| predicted protein [Populus trichocarpa]
gi|222854466|gb|EEE92013.1| predicted protein [Populus trichocarpa]
Length = 181
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/218 (36%), Positives = 99/218 (45%), Gaps = 57/218 (26%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
+S LYVG+L TR R++E LF KYG + D+D+K YAF+EF D RDA+DA
Sbjct: 9 ASTRLYVGHLAARTRSRDLEHLFSKYGRVRDVDMKRD-----YAFVEFSDPRDADDARHY 63
Query: 65 RDGYNFDGYRLRVELAHGGRRHSSS-MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASW 123
DG FDG R+ VE A G R S + R SG R G+ W
Sbjct: 64 LDGKEFDGSRIIVEFAKGVPRGSREYLGRGPPPGSG-----------RCFNCGI--DGHW 110
Query: 124 -QDLKDHMRRAGD---VCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRS 179
+D K AGD C+ R G G ++ + K + +KL R
Sbjct: 111 ARDCK-----AGDWKNKCY------RCGERGHIER----NCKNSPKKLTRG--------- 146
Query: 180 YVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRS 217
+SYSRSP RS R RSRSP YSR RS
Sbjct: 147 ----------KSYSRSPGRSRSPHRGRSRSPSYSRGRS 174
>gi|194742457|ref|XP_001953719.1| GF17902 [Drosophila ananassae]
gi|190626756|gb|EDV42280.1| GF17902 [Drosophila ananassae]
Length = 163
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E+ F KYGP+ ++ + PPG+AF+EFED RDAEDA R DG
Sbjct: 13 VYVGNLGSSASKYEIENAFAKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRALDGT 70
Query: 69 NFDGYRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|328724546|ref|XP_003248181.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 3
[Acyrthosiphon pisum]
gi|328724548|ref|XP_003248182.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 4
[Acyrthosiphon pisum]
Length = 137
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG+L +++ED F YG I ++ + PPG+AF+EFED RDAEDA+RG DG
Sbjct: 17 IYVGDLGSSASKQDLEDAFSYYGSIRNV--WVARNPPGFAFVEFEDPRDAEDAVRGLDGR 74
Query: 69 NFDGYRLRVELAHGGRRHSS 88
+ G R+RVEL++ G R +
Sbjct: 75 SICGRRVRVELSNAGSRKGA 94
>gi|341903887|gb|EGT59822.1| CBN-RSP-6 protein [Caenorhabditis brenneri]
Length = 248
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP D +E+E++F ++G I + + RPPG+AF+E++D RDAEDA+R DG
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIRKV--WVARRPPGFAFVEYDDVRDAEDAVRALDGS 62
Query: 69 NFDGYRLRVELAHG 82
G R RVEL+ G
Sbjct: 63 RICGVRARVELSTG 76
>gi|354548311|emb|CCE45047.1| hypothetical protein CPAR2_700510 [Candida parapsilosis]
Length = 272
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 83/174 (47%), Gaps = 30/174 (17%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M ++ L+V + D R ++ + F P+V++ L GYAF+ F+ +A+
Sbjct: 1 MEQVPTKQLFVRPIRDDVREDDLIEFFSTAAPVVEVRLM-----QGYAFVSFQTEDEADA 55
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
A++ DG +G +L+VE A ++ +RV +TGL
Sbjct: 56 ALKKMDGQELNGEQLQVEFAK-----------------------PKKEVHRVKLTGLIDG 92
Query: 121 ASWQDLKDHMR-RAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
+WQD+KD +R + G + F +VF + G + + S DD++ AI LD+S F
Sbjct: 93 TAWQDIKDFVRDKTGTEPSFVRVFTNESGTVCDLQFESRDDLEKAIPLLDKSTF 146
>gi|297821068|ref|XP_002878417.1| arginine/serine-rich splicing factor 31 [Arabidopsis lyrata subsp.
lyrata]
gi|297324255|gb|EFH54676.1| arginine/serine-rich splicing factor 31 [Arabidopsis lyrata subsp.
lyrata]
Length = 264
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 107/249 (42%), Gaps = 35/249 (14%)
Query: 7 RTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRD 66
R ++VGN +TR ++E LF KYG + +D+K GYAF+ FED RDAEDAIR D
Sbjct: 2 RPVFVGNFEYETRQSDLERLFDKYGRVERVDMKS-----GYAFVYFEDERDAEDAIRKLD 56
Query: 67 GYNFDGY---RLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVL--VTGLPSSA 121
+ F GY RL VE A G R G ++ S + L + P
Sbjct: 57 NFPF-GYEKRRLSVEWAKGER----------GRPRGDAKATSNLKPTKTLFVINFDPIRT 105
Query: 122 SWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYV 181
D++ H G V ++ R+ V + + +D A+ RS+ +
Sbjct: 106 KEHDIEKHFEPYGKVINVRIRRN----FSFVQFETQEDATKALEATQRSKILDRVVSVEY 161
Query: 182 RVREYDSR--RSYSRSPSR--SPYYSR------SRSRSPYYSRSRSPSRSWSYSPRSRSY 231
+++ D R R RSP R SP Y R R SP Y R SP + SP Y
Sbjct: 162 ALKDDDERDDRYGGRSPRRSLSPVYRRRPSPDYGRRPSPDYGRRPSPDNGRARSPEYDRY 221
Query: 232 SPRGKYSRR 240
Y RR
Sbjct: 222 KGPAAYERR 230
>gi|157117871|ref|XP_001653077.1| RNA-binding protein [Aedes aegypti]
gi|108883341|gb|EAT47566.1| AAEL001356-PA [Aedes aegypti]
Length = 131
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F KYGP+ ++ + PPG+AF+EFED RDAEDA+R DG
Sbjct: 13 VYVGNLGSSASKHEIESAFGKYGPLRNV--WVARNPPGFAFVEFEDKRDAEDAVRSLDGT 70
Query: 69 NFDGYRLRVELA 80
G R+RVE++
Sbjct: 71 RCCGTRIRVEMS 82
>gi|24645769|ref|NP_731510.1| RNA-binding protein 1, isoform D [Drosophila melanogaster]
gi|194902212|ref|XP_001980643.1| GG17683 [Drosophila erecta]
gi|195330033|ref|XP_002031713.1| GM23896 [Drosophila sechellia]
gi|195571925|ref|XP_002103951.1| GD18708 [Drosophila simulans]
gi|55584177|sp|Q02427.3|RBP1_DROME RecName: Full=RNA-binding protein 1
gi|17861840|gb|AAL39397.1| GM02602p [Drosophila melanogaster]
gi|23170942|gb|AAN13487.1| RNA-binding protein 1, isoform D [Drosophila melanogaster]
gi|190652346|gb|EDV49601.1| GG17683 [Drosophila erecta]
gi|194120656|gb|EDW42699.1| GM23896 [Drosophila sechellia]
gi|194199878|gb|EDX13454.1| GD18708 [Drosophila simulans]
gi|220943202|gb|ACL84144.1| Rbp1-PB [synthetic construct]
gi|220953396|gb|ACL89241.1| Rbp1-PB [synthetic construct]
Length = 144
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 45/71 (63%), Gaps = 2/71 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F KYGP+ ++ + PPG+AF+EFED RDAEDA R DG
Sbjct: 13 VYVGNLGSSASKHEIEGAFAKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRALDGT 70
Query: 69 NFDGYRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|156086400|ref|XP_001610609.1| splicing factor, arginine/serine-rich 3 [Babesia bovis T2Bo]
gi|154797862|gb|EDO07041.1| splicing factor, arginine/serine-rich 3, putative [Babesia bovis]
Length = 140
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
S R +Y+GNL + + +VE LF K+G I +I + RPPG+AF+ FED RDA D
Sbjct: 5 FESTEGRKVYIGNLNPEATVEDVESLFSKFGTIGNI--WVARRPPGFAFVTFEDPRDATD 62
Query: 61 AIRGRDGYNFDGYRLRVELAHG 82
AI DG + G L+VEL+ G
Sbjct: 63 AIEELDGSEYKGQNLKVELSKG 84
>gi|24641772|ref|NP_572880.2| Rbp1-like, isoform A [Drosophila melanogaster]
gi|21064531|gb|AAM29495.1| RE47308p [Drosophila melanogaster]
gi|22832194|gb|AAF48264.2| Rbp1-like, isoform A [Drosophila melanogaster]
gi|220948574|gb|ACL86830.1| Rbp1-like-PA [synthetic construct]
gi|220957848|gb|ACL91467.1| Rbp1-like-PA [synthetic construct]
Length = 158
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E+ F KYGP+ ++ + PPG+AF+EFED RDAEDA RG DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRGLDGT 70
Query: 69 NFDGYRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|198471193|ref|XP_001355529.2| GA15173 [Drosophila pseudoobscura pseudoobscura]
gi|198145808|gb|EAL32588.2| GA15173 [Drosophila pseudoobscura pseudoobscura]
Length = 161
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E+ F KYGP+ ++ + PPG+AF+EFED RDAEDA RG DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRGLDGT 70
Query: 69 NFDGYRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|195478268|ref|XP_002100463.1| GE16161 [Drosophila yakuba]
gi|194187987|gb|EDX01571.1| GE16161 [Drosophila yakuba]
Length = 160
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E+ F KYGP+ ++ + PPG+AF+EFED RDAEDA RG DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRGLDGT 70
Query: 69 NFDGYRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|195129938|ref|XP_002009411.1| GI15337 [Drosophila mojavensis]
gi|193907861|gb|EDW06728.1| GI15337 [Drosophila mojavensis]
Length = 151
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E+ F KYGP+ ++ + PPG+AF+EFED RDAEDA RG DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRGLDGT 70
Query: 69 NFDGYRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|195045313|ref|XP_001991952.1| GH24472 [Drosophila grimshawi]
gi|193892793|gb|EDV91659.1| GH24472 [Drosophila grimshawi]
Length = 163
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E+ F KYGP+ ++ + PPG+AF+EFED RDAEDA RG DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRGLDGT 70
Query: 69 NFDGYRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|194895540|ref|XP_001978277.1| GG19507 [Drosophila erecta]
gi|190649926|gb|EDV47204.1| GG19507 [Drosophila erecta]
Length = 159
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E+ F KYGP+ ++ + PPG+AF+EFED RDAEDA RG DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRGLDGT 70
Query: 69 NFDGYRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|342326406|gb|AEL23118.1| 52K active chromatin boundary protein [Cherax quadricarinatus]
Length = 169
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 65/132 (49%), Gaps = 5/132 (3%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG L R++ F YGP+ D+ + I G+ F+E +DYRDA DA+ +G
Sbjct: 39 VYVGGLYYRVGERDLMRFFLCYGPLGDLVIMI-----GFCFVEIDDYRDAYDAVCYMNGK 93
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
G R +E A R SS G+ ++YR+ + L S SWQDLKD
Sbjct: 94 ELLGGRCSMEKARAAPRMMWPRAPPPIGSSSSLFGMPALANYRLTIENLSSRVSWQDLKD 153
Query: 129 HMRRAGDVCFSQ 140
MR+AG V +
Sbjct: 154 FMRQAGKVTYGH 165
>gi|313222821|emb|CBY41772.1| unnamed protein product [Oikopleura dioica]
Length = 730
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 76/168 (45%), Gaps = 31/168 (18%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M + ++++GNL R ++E F YG + DI LK GY F++F+D DA+D
Sbjct: 162 MGAGEMHSVFIGNLSDHARHEDIEKFFKGYGSLRDISLK-----GGYGFVQFKDKYDAKD 216
Query: 61 AIRGRDGYNFDGYRLRVELAH------------------------GGRRHSSSMDRYSSY 96
A++ DG G ++R+EL++ R +S R S Y
Sbjct: 217 AVQDLDGKEICGQKVRIELSNGGRDRTRRGRDSYSRSRSRSRDNSRYSRSTSKSPRRSFY 276
Query: 97 SSGGSR--GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVF 142
R G +++ Y + + L SWQDLKD RR G+V + F
Sbjct: 277 ERTAYRKYGAPKKTKYAIEIENLSERVSWQDLKDFFRRVGEVSYDNHF 324
>gi|195107293|ref|XP_001998248.1| GI23736 [Drosophila mojavensis]
gi|193914842|gb|EDW13709.1| GI23736 [Drosophila mojavensis]
Length = 137
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E+ F KYGP+ ++ I PPG+AF+EFED RDAEDA R DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLKNV--WIARNPPGFAFVEFEDRRDAEDATRALDGT 70
Query: 69 NFDGYRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|410953846|ref|XP_003983581.1| PREDICTED: serine/arginine-rich splicing factor 6 [Felis catus]
Length = 318
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 85/166 (51%), Gaps = 26/166 (15%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLK--IPPRPPGYAFLEFEDYRDAEDAIRGRD 66
+Y+G L + R ++++ F YG +++IDLK +P R +A RDA G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLKNGVPGRRCLHACPG--QLRDAGARGLGCG 61
Query: 67 GYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDL 126
G + R +S D+Y G R+++R++V L S SWQDL
Sbjct: 62 GGGYSS------------RRTSGRDKY---------GPPVRTEFRLIVENLSSRCSWQDL 100
Query: 127 KDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
KD MR+AG+V ++ ++R G++++ SY DMK A+ KLD +E
Sbjct: 101 KDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 145
>gi|268552699|ref|XP_002634332.1| C. briggsae CBR-RSP-6 protein [Caenorhabditis briggsae]
Length = 157
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP D +E+E++F ++G I + + RPPG+AF+E++D RDAEDA+R DG
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIRKV--WVARRPPGFAFVEYDDVRDAEDAVRALDGS 62
Query: 69 NFDGYRLRVELAHG 82
G R RVEL+ G
Sbjct: 63 RICGVRARVELSTG 76
>gi|324513594|gb|ADY45580.1| Splicing factor, arginine/serine-rich 6 [Ascaris suum]
Length = 144
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
++VG LP D +E+E+ F +YGPI + + RPPG+AF+EFED RDA+DA++ +G
Sbjct: 12 VFVGGLPHDATTQELEEAFGRYGPIRKVWMA--RRPPGFAFIEFEDSRDADDAVKALNGA 69
Query: 69 NFDGYRLRVELAH 81
G R RVE++H
Sbjct: 70 RICGVRPRVEISH 82
>gi|307180295|gb|EFN68328.1| Splicing factor, arginine/serine-rich 7 [Camponotus floridanus]
Length = 156
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG+L +E+ED F YG + ++ + PPG+AF+EFED RDAEDA+RG DG
Sbjct: 13 VYVGDLGSSASKQELEDAFSYYGSLQNV--WVARNPPGFAFVEFEDPRDAEDAVRGLDGR 70
Query: 69 NFDGYRLRVELAHG 82
G R+RVEL++G
Sbjct: 71 TLCGRRVRVELSNG 84
>gi|62089194|dbj|BAD93041.1| CS0DF038YO05 variant [Homo sapiens]
Length = 326
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 92/221 (41%), Gaps = 63/221 (28%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++G L R ++VE F YG I DIDLK G+ F+EFED RDA+DA+ DG
Sbjct: 9 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 63
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSAS 122
R+ +E A R RYS +SS R R R++ R++V L S S
Sbjct: 64 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVS 123
Query: 123 WQ---------------------------------------------------DLKDHMR 131
WQ DLKD MR
Sbjct: 124 WQVCILIEYKCGKCHVCTLSNIFSFSSLVFFISCDCLCVPFPLLCLTQLSCVKDLKDFMR 183
Query: 132 RAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
+AG+V F+ R + G+V++ SY D+K AI KL E
Sbjct: 184 QAGEVTFADAHRPKLN-EGVVEFASYGDLKNAIEKLSGKEI 223
>gi|226494041|ref|NP_001147698.1| arginine/serine-rich splicing factor RSP41 [Zea mays]
gi|195613160|gb|ACG28410.1| arginine/serine-rich splicing factor RSP41 [Zea mays]
gi|195655913|gb|ACG47424.1| arginine/serine-rich splicing factor RSP41 [Zea mays]
Length = 279
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 123/295 (41%), Gaps = 59/295 (20%)
Query: 7 RTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRD 66
R ++ GNL D R+ EVE LF KYG + +DLK G+AF+ ED RDAEDAI D
Sbjct: 2 RPVFCGNLDYDVRISEVERLFGKYGRVERVDLKT-----GFAFVYMEDERDAEDAISRLD 56
Query: 67 GYNF--DGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVL--VTGLPSSAS 122
G +F G R+RVE + DR S R + + L + P +
Sbjct: 57 GIDFGRKGRRIRVEW--------TKEDRTVGRKSSSRRSPTNTKPTKTLFVINFDPINTR 108
Query: 123 WQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVR 182
+DL+ H + G V ++ ++ + + +D A+ + S F +
Sbjct: 109 IRDLERHFDKYGRVANVRIKKN----FAFIQFEVQEDATRALEGTNGSHFMDRVISVEYA 164
Query: 183 VREYDS-----------RRSYSRSPSR--------------SPYYSRSRSR-SPYYSR-S 215
+R+ D RR RSP R SP Y RS+ R SP Y R
Sbjct: 165 LRDDDEKGERGNGYSPDRRGRERSPGRRRSPSPYGRGRERGSPDYGRSKERGSPDYGRGG 224
Query: 216 RSPSRSWSYSPRSRSYSPRGKYSR---RSPSLSPARSAS-----QRSPSGSPPRS 262
RSP SP + RG ++R RSP R + RSPS SP R
Sbjct: 225 RSPDNGRGVSP---AGGGRGDHARGGGRSPDYDRQRREASPPGYDRSPSRSPGRE 276
>gi|225717656|gb|ACO14674.1| RNA-binding protein 1 [Caligus clemensi]
Length = 139
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+ED+F +YG + + + PPG+AF+EFED RDAEDA +G DG
Sbjct: 14 VYVGNLGDNASKHEIEDVFRRYGKVRSV--WVARNPPGFAFVEFEDERDAEDAAKGLDGS 71
Query: 69 NFDGYRLRVELA 80
G R VE++
Sbjct: 72 RICGVRAAVEMS 83
>gi|145346370|ref|XP_001417662.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577890|gb|ABO95955.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 129
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 73/136 (53%), Gaps = 7/136 (5%)
Query: 7 RTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRD 66
R +YVGNLP D R+V+ F +G + +++K P PP +AF+ F+D RDAE A R D
Sbjct: 1 RAVYVGNLPLDASSRDVDRRFAAHGVVARVEVKRPRHPPAFAFVTFDDARDAERAARAED 60
Query: 67 GYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDL 126
G FDG R G D + S R +R++++ V V LP A W+D+
Sbjct: 61 GTTFDGRR-------GPYDRPRWRDGADARSMVRERAATRKTEHSVKVEDLPRGADWRDV 113
Query: 127 KDHMRRAGDVCFSQVF 142
KD RRAG V ++ F
Sbjct: 114 KDAFRRAGRVTYASTF 129
>gi|55926178|ref|NP_001007487.1| serine/arginine-rich splicing factor 7 [Xenopus (Silurana)
tropicalis]
gi|51262158|gb|AAH79925.1| splicing factor, arginine/serine-rich 7, 35kDa [Xenopus
(Silurana) tropicalis]
Length = 234
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDTRDAEDAVRGLDGK 70
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R S
Sbjct: 71 VICGSRVRVELSTGMPRRS 89
>gi|260947976|ref|XP_002618285.1| hypothetical protein CLUG_01743 [Clavispora lusitaniae ATCC 42720]
gi|238848157|gb|EEQ37621.1| hypothetical protein CLUG_01743 [Clavispora lusitaniae ATCC 42720]
Length = 317
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 78/169 (46%), Gaps = 28/169 (16%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
L+V L +T VE F + GP+VD+ + GYAF+ +E+ DA A+
Sbjct: 46 LFVRPLGYETSREMVEAHFSEVGPLVDVQMMR-----GYAFITYENPSDATRAVDTLTNT 100
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
+ G L++E A R + R +R T LP +WQD KD
Sbjct: 101 DLGGAPLQIEFAREKREDT-------------------RGQHRAKATNLPEGTAWQDFKD 141
Query: 129 HMRRAGDV--CFSQVFR--DRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
+R F++VFR D G G ++++S D+++ AI +L+ ++F
Sbjct: 142 FVREKTGCSPTFAKVFRDYDSGNTIGALEFSSADELQKAISELNEADFN 190
>gi|195628072|gb|ACG35866.1| arginine/serine-rich splicing factor RSP41 [Zea mays]
Length = 255
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 81/167 (48%), Gaps = 21/167 (12%)
Query: 7 RTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRD 66
R ++ GN DTR ++E LF KYGPI ID+K+ GYAF+ FED RDAEDAIR D
Sbjct: 2 RPVFCGNFDHDTRQYDLERLFSKYGPISRIDMKL-----GYAFIYFEDERDAEDAIRRLD 56
Query: 67 GYNFDGY---RLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASW 123
+F GY RL VE + S DR + G + + ++ P
Sbjct: 57 NVSF-GYNRRRLSVEWSRQVEPVPKSRDRPT--------GDVKPTRTLFVINFDPIRTKV 107
Query: 124 QDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRS 170
QD++ H G + ++ R+ V Y + ++ A++ D+S
Sbjct: 108 QDIEKHFEPYGKIANIRIRRN----FAFVQYETQEEASAAVKNTDKS 150
>gi|212722812|ref|NP_001131484.1| uncharacterized protein LOC100192821 [Zea mays]
gi|194691660|gb|ACF79914.1| unknown [Zea mays]
gi|224032781|gb|ACN35466.1| unknown [Zea mays]
gi|413957159|gb|AFW89808.1| arginine/serine-rich splicing factor RSP41 isoform 1 [Zea mays]
gi|413957160|gb|AFW89809.1| arginine/serine-rich splicing factor RSP41 isoform 2 [Zea mays]
gi|413957161|gb|AFW89810.1| arginine/serine-rich splicing factor RSP41 isoform 3 [Zea mays]
Length = 255
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 81/167 (48%), Gaps = 21/167 (12%)
Query: 7 RTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRD 66
R ++ GN DTR ++E LF KYGPI ID+K+ GYAF+ FED RDAEDAIR D
Sbjct: 2 RPVFCGNFDHDTRQYDLERLFSKYGPISRIDMKL-----GYAFIYFEDERDAEDAIRRLD 56
Query: 67 GYNFDGY---RLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASW 123
+F GY RL VE + S DR + G + + ++ P
Sbjct: 57 NVSF-GYNRRRLSVEWSRQVEPVPKSRDRPT--------GDVKPTRTLFVINFDPIRTKV 107
Query: 124 QDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRS 170
QD++ H G + ++ R+ V Y + ++ A++ D+S
Sbjct: 108 QDIEKHFEPYGKIANIRIRRN----FAFVQYETQEEASAAVKNTDKS 150
>gi|194696906|gb|ACF82537.1| unknown [Zea mays]
gi|413935351|gb|AFW69902.1| arginine/serine-rich splicing factor RSP41 [Zea mays]
Length = 279
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 123/295 (41%), Gaps = 59/295 (20%)
Query: 7 RTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRD 66
R ++ GNL D R+ EVE LF KYG + +DLK G+AF+ ED RDAEDAI D
Sbjct: 2 RPVFCGNLDYDVRISEVERLFGKYGRVERVDLKT-----GFAFVYMEDERDAEDAISRLD 56
Query: 67 GYNF--DGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVL--VTGLPSSAS 122
G +F G R+RVE + DR S R + + L + P +
Sbjct: 57 GIDFGRKGRRIRVEW--------TKEDRTVGRKSSSRRSPTNTKPTKTLFVINFDPINTR 108
Query: 123 WQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVR 182
+DL+ H + G V ++ ++ + + +D A+ + S F +
Sbjct: 109 IRDLERHFDKYGRVANVRIKKN----FAFIQFEIQEDATRALEGTNGSHFMDRVISVEYA 164
Query: 183 VREYDS-----------RRSYSRSPSR--------------SPYYSRSRSR-SPYYSR-S 215
+R+ D RR RSP R SP Y RS+ R SP Y R
Sbjct: 165 LRDDDEKGERGNGYSPDRRGRERSPGRRRSPSPYGRGRERGSPDYGRSKERGSPDYGRGG 224
Query: 216 RSPSRSWSYSPRSRSYSPRGKYSR---RSPSLSPARSAS-----QRSPSGSPPRS 262
RSP SP + RG ++R RSP R + RSPS SP R
Sbjct: 225 RSPDNGRGVSP---AGGGRGDHARGGGRSPDYDRQRREASPPGYDRSPSRSPGRE 276
>gi|346466769|gb|AEO33229.1| hypothetical protein [Amblyomma maculatum]
Length = 289
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 65/112 (58%), Gaps = 9/112 (8%)
Query: 66 DGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR-----GVSRRSDYRVLVTGLPSS 120
+G G R+ VELA G RR + D Y S ++ S G R++Y++ V L S
Sbjct: 4 NGKELLGDRVSVELARGIRRGA---DYYRSRAASRSPPRRRYGPPTRTEYQLTVENLSSR 60
Query: 121 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
SWQDLKD+MR+AG+V ++ R R G+V++ +Y DMK A+ KLD ++
Sbjct: 61 VSWQDLKDYMRQAGEVTYADAHRLRRN-EGVVEFATYSDMKNALEKLDNTDL 111
>gi|341886966|gb|EGT42901.1| hypothetical protein CAEBREN_25648 [Caenorhabditis brenneri]
Length = 183
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP D +E+E++F ++G I + + RPPG+AF+E++D RDAEDA+R DG
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIRKV--WVARRPPGFAFVEYDDVRDAEDAVRALDGS 62
Query: 69 NFDGYRLRVELAHG 82
G R RVEL+ G
Sbjct: 63 RICGVRARVELSTG 76
>gi|158296825|ref|XP_317163.4| AGAP008303-PA [Anopheles gambiae str. PEST]
gi|157014898|gb|EAA12231.4| AGAP008303-PA [Anopheles gambiae str. PEST]
Length = 228
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG L + +++E+ F YGP+ ++ + PPG+AF+EFED RDAEDA+RG DG
Sbjct: 10 VYVGELGNNASKQDIEEAFGYYGPLRNV--WVARNPPGFAFVEFEDARDAEDAVRGLDGR 67
Query: 69 NFDGYRLRVEL 79
G R RVEL
Sbjct: 68 TISGRRARVEL 78
>gi|391331353|ref|XP_003740112.1| PREDICTED: uncharacterized protein LOC100903643 [Metaseiulus
occidentalis]
Length = 162
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+GNL T ++E F KYG + ++ + PPG+AF+EFED RDAEDA+R DG
Sbjct: 12 VYIGNLANHTSRHDIESAFGKYGNLRNV--WVARNPPGFAFVEFEDSRDAEDAVRALDGS 69
Query: 69 NFDGYRLRVELAH 81
G R++ E++H
Sbjct: 70 RICGSRVKCEMSH 82
>gi|268531974|ref|XP_002631115.1| C. briggsae CBR-RSP-1 protein [Caenorhabditis briggsae]
Length = 304
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 86/186 (46%), Gaps = 33/186 (17%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L +++E F YG I D+ LK G+ F+EF+D RDAEDA+ +G
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRDVLLK-----NGFGFVEFDDKRDAEDAVHDLNGK 59
Query: 69 NFDGYRLRVELAH--------GGRRHSSSMDRYSSYSSGG--------SRGVSRRSD--- 109
G R+ ++ + GG R SSYS GG RG RR
Sbjct: 60 ELGGDRVILDYSKPRGGGGSGGGYGDRRGGGRVSSYSGGGGRDRFDRYDRGPPRRESRYG 119
Query: 110 ------YRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKY 162
+RVLV L S SWQDLKD +RR G + +++ + ++ + + D+K
Sbjct: 120 RPYSTRHRVLVENLSSRISWQDLKDQVRRQGVEPTYAEAHKRPN--EALLCFATPSDLKR 177
Query: 163 AIRKLD 168
I K D
Sbjct: 178 CIDKCD 183
>gi|320542033|ref|NP_001188585.1| Rbp1-like, isoform B [Drosophila melanogaster]
gi|318069370|gb|ADV37667.1| Rbp1-like, isoform B [Drosophila melanogaster]
Length = 247
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E+ F KYGP+ ++ + PPG+AF+EFED RDAEDA RG DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRGLDGT 70
Query: 69 NFDGYRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|322787527|gb|EFZ13615.1| hypothetical protein SINV_15244 [Solenopsis invicta]
Length = 128
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 52/78 (66%), Gaps = 2/78 (2%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
S +YVG+L +++ED F YGP+ ++ + PPG+AF+EFED RDAEDA+RG
Sbjct: 8 SDGKVYVGDLGSSASKQQLEDAFSYYGPLHNV--WVARNPPGFAFVEFEDPRDAEDAVRG 65
Query: 65 RDGYNFDGYRLRVELAHG 82
DG G R+RVEL++G
Sbjct: 66 LDGRIVCGRRIRVELSNG 83
>gi|413944557|gb|AFW77206.1| hypothetical protein ZEAMMB73_752942 [Zea mays]
Length = 330
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 91/261 (34%), Positives = 115/261 (44%), Gaps = 43/261 (16%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
S+ LYVG + TR +++ED+F KYG + ++D+K + F+EF D RDA+DA
Sbjct: 88 SNTKLYVGQISPYTRTQDLEDIFRKYGRLRNVDMKRE-----FGFVEFTDPRDADDARHD 142
Query: 65 RDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASW- 123
DG FDG L VE A G +R GG + + W
Sbjct: 143 LDGRIFDGSHLIVEFARGAQR-----------GPGGVPLDGKGPSFPGRCYNCGMDGHWV 191
Query: 124 QDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRV 183
+D K R D CF R G G ++ + K R RS R+A S + +
Sbjct: 192 RDCKAGDWR--DKCF------RCGELGHIERNCKNSSKDLKR--GRSYLRSA-SPHHGKG 240
Query: 184 REYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSP----SRSWSYSPRSRSYSPRGKYSR 239
R RSYSRS SPY R R RS YSRS S RSWSY SRS+SPR
Sbjct: 241 RG----RSYSRSL--SPYLGRGRGRS--YSRSPSHYHRRGRSWSY---SRSHSPRNNSKA 289
Query: 240 RSPSLSPARSASQRSPSGSPP 260
L RS R P S P
Sbjct: 290 YGEELPSTRSGYSRGPRRSSP 310
>gi|195168745|ref|XP_002025191.1| GL26725 [Drosophila persimilis]
gi|194108636|gb|EDW30679.1| GL26725 [Drosophila persimilis]
Length = 174
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E+ F KYGP+ ++ + PPG+AF+EFED RDAEDA RG DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRGLDGT 70
Query: 69 NFDGYRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|28629815|gb|AAO45173.1| splicing factor arginine/serine-rich 3 [Paralichthys olivaceus]
Length = 168
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + + PPG+AF+EFED RDA DA+R DG
Sbjct: 16 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDASDAVRELDGR 73
Query: 69 NFDGYRLRVELAHGGRRHSS 88
N G +LRVEL+ G +R S
Sbjct: 74 NMCGCKLRVELSTGEKRSRS 93
>gi|297259798|ref|XP_001084701.2| PREDICTED: hypothetical protein LOC696054 [Macaca mulatta]
Length = 294
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 78/164 (47%), Gaps = 45/164 (27%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L + R ++++ F YG ++++DLK +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK--------------------------NGC 37
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
GY R +S D+Y G R++YR++V L S SWQDLKD
Sbjct: 38 GGGGY---------SSRRTSGRDKY---------GPPVRTEYRLIVENLSSRCSWQDLKD 79
Query: 129 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
MR+AG+V ++ ++R G++++ SY DMK A+ KLD +E
Sbjct: 80 FMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 122
>gi|149239658|ref|XP_001525705.1| hypothetical protein LELG_03633 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451198|gb|EDK45454.1| hypothetical protein LELG_03633 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 286
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 84/180 (46%), Gaps = 32/180 (17%)
Query: 1 MSSRS----SRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYR 56
MSSR+ ++ L+V + DT +E+ED F + P++D + GYAF+ FE+
Sbjct: 1 MSSRAPSEPTKQLFVRPVRSDTDKQELEDFFAQAAPVIDSRIM-----EGYAFVSFENVE 55
Query: 57 DAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTG 116
D++ A+ F G L++E A R R YRV + G
Sbjct: 56 DSQSALDKLVNTEFQGEPLQIEFAK-------------------ERKEDTRGKYRVKILG 96
Query: 117 LPSSASWQDLKDHMRRAGDV--CFSQVFRD--RGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
LP + +W + +R D F +V+RD G ++++S ++M+ I LD++EF
Sbjct: 97 LPENTAWARCQGFRQRQTDFQPSFVKVYRDSESGETICNMEFSSAEEMEKGIPLLDKAEF 156
>gi|45387765|ref|NP_991236.1| splicing factor, arginine/serine-rich 7 [Danio rerio]
gi|41350982|gb|AAH65586.1| Zgc:77155 [Danio rerio]
Length = 258
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG+L E+E F YGP+ + + PPG+AF+E+ED RDAEDA++G DG
Sbjct: 16 VYVGDLGNGAAKGELERAFSYYGPLRSV--WVARNPPGFAFVEYEDARDAEDAVKGMDGK 73
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL++G R S
Sbjct: 74 VLCGARVRVELSNGMSRKS 92
>gi|312371045|gb|EFR19313.1| hypothetical protein AND_22699 [Anopheles darlingi]
Length = 225
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 48/72 (66%), Gaps = 2/72 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG L + +++E+ F YGP+ ++ + PPG+AF+EFED RDAEDA+RG DG
Sbjct: 10 VYVGELGNNASKQDIEEAFGYYGPLRNV--WVARNPPGFAFVEFEDARDAEDAVRGLDGR 67
Query: 69 NFDGYRLRVELA 80
G R RVEL+
Sbjct: 68 TISGRRARVELS 79
>gi|357609122|gb|EHJ66310.1| arginine/serine-rich splicing factor 7 [Danaus plexippus]
Length = 174
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
MS +YVG+L + E+ED F YGP+ ++ + PPG+AF+EFED RDAED
Sbjct: 1 MSRYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNV--WVARNPPGFAFVEFEDPRDAED 58
Query: 61 AIRGRDGYNFDGYRLRVELAH 81
AIRG DG G R RVE+++
Sbjct: 59 AIRGLDGRTICGRRARVEMSN 79
>gi|24645765|ref|NP_524307.1| RNA-binding protein 1, isoform A [Drosophila melanogaster]
gi|195499861|ref|XP_002097127.1| GE26048 [Drosophila yakuba]
gi|7299363|gb|AAF54555.1| RNA-binding protein 1, isoform A [Drosophila melanogaster]
gi|194183228|gb|EDW96839.1| GE26048 [Drosophila yakuba]
gi|384217|prf||1905314A RNA-binding protein
Length = 135
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 45/71 (63%), Gaps = 2/71 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F KYGP+ ++ + PPG+AF+EFED RDAEDA R DG
Sbjct: 13 VYVGNLGSSASKHEIEGAFAKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRALDGT 70
Query: 69 NFDGYRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|62089298|dbj|BAD93093.1| splicing factor, arginine/serine-rich 4 variant [Homo sapiens]
Length = 419
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 107 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 166
R++YR++V L S SWQDLKD+MR+AG+V ++ + R G++++ SY DMK A+ K
Sbjct: 26 RTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEK 84
Query: 167 LDRSEF 172
LD +E
Sbjct: 85 LDGTEV 90
>gi|448534987|ref|XP_003870881.1| Npl3 RNA-binding protein [Candida orthopsilosis Co 90-125]
gi|380355237|emb|CCG24753.1| Npl3 RNA-binding protein [Candida orthopsilosis]
Length = 282
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 83/179 (46%), Gaps = 28/179 (15%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M ++ L+V + D R ++ + F P+V++ L GYAFL F++ DA +
Sbjct: 1 MEQAPTKQLFVRPIRSDVREEDLIEHFSAAAPVVEVRLM-----EGYAFLTFDNESDAGE 55
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
A+ G +F +L+VE A R R YR+ +TGLP
Sbjct: 56 ALSKFAGTDFRDEQLQVEFAK-------------------ERKEDTRGKYRLKITGLPEG 96
Query: 121 ASWQDLKDHMR--RAGDVCFSQVFR--DRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNA 175
+WQD+KD +R + F +VFR D G + + + +D++ +I LD++ F A
Sbjct: 97 TAWQDVKDFVRDKTGTEANFVRVFRDYDSGDTICSLQFETGEDLEKSIPLLDKANFGEA 155
>gi|167536851|ref|XP_001750096.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771425|gb|EDQ85092.1| predicted protein [Monosiga brevicollis MX1]
Length = 136
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
SR ++VGNLP D ++E+ F ++G ++D+ + +PPG+AF++FED RDAEDA++G
Sbjct: 44 QSRQVFVGNLPDDIEKMDLENEFRQFGRLLDV--WVARKPPGFAFVKFEDQRDAEDAVQG 101
Query: 65 RDGYNFDGYRLRVELAH 81
+ G +RVE++H
Sbjct: 102 LNRRTAFGREIRVEISH 118
>gi|297828391|ref|XP_002882078.1| hypothetical protein ARALYDRAFT_483824 [Arabidopsis lyrata subsp.
lyrata]
gi|297327917|gb|EFH58337.1| hypothetical protein ARALYDRAFT_483824 [Arabidopsis lyrata subsp.
lyrata]
Length = 250
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 100/226 (44%), Gaps = 29/226 (12%)
Query: 7 RTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRD 66
R ++VGN DTR ++E LF KYG + +D+K GYAF+ FED RDAEDAIRG D
Sbjct: 2 RPVFVGNFDYDTRQSDLERLFSKYGRVERVDMK-----SGYAFVYFEDERDAEDAIRGTD 56
Query: 67 GYNFDGY---RLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASW 123
F GY +L VE A G + G + R + ++ P
Sbjct: 57 NTTF-GYERRKLSVEWAKGFKGERGKP------RDGKAASNQRPTKTLFVINFDPIRTRE 109
Query: 124 QDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRV 183
+D++ H G V ++ R+ V + + +D A+ S+ + +
Sbjct: 110 RDMERHFEPYGKVLNVRIRRN----FAFVQFATQEDATKALDCTHNSKILDRVVSVEYAL 165
Query: 184 REYDSRRS-YSRSPSR---SPYYSR------SRSRSPYYSRSRSPS 219
RE R Y+ SP R SP Y R R RSP Y R + P+
Sbjct: 166 REDGEREDRYAGSPRRRSPSPVYRRRPSPDYGRPRSPEYDRYKGPA 211
>gi|25144922|ref|NP_741447.1| Protein RSP-6, isoform b [Caenorhabditis elegans]
gi|351058800|emb|CCD66575.1| Protein RSP-6, isoform b [Caenorhabditis elegans]
Length = 153
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP D +E+E++F ++G I + + RPPG+AF+E++D RDAEDA+R DG
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIRKV--WVARRPPGFAFVEYDDVRDAEDAVRALDGS 62
Query: 69 NFDGYRLRVELA 80
G R RVEL+
Sbjct: 63 RICGVRARVELS 74
>gi|289740745|gb|ADD19120.1| alternative splicing factor SRP20/9G8 [Glossina morsitans
morsitans]
Length = 145
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E+ F KYGP+ ++ + PPG+AF+EF+D RDAEDA RG DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLRNV--WVARNPPGFAFVEFDDRRDAEDATRGLDGT 70
Query: 69 NFDGYRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|385305161|gb|EIF49152.1| npl3p [Dekkera bruxellensis AWRI1499]
Length = 321
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 82/177 (46%), Gaps = 26/177 (14%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
M S L+V + DT+ E+E+ F + GPI ++ + PGYAF+E+E A+
Sbjct: 1 MVEYSDVQLFVRPIGPDTKHEEIEEFFSEVGPIKELRMM-----PGYAFIEYETPEVAKK 55
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
A F G L++E A + Y+ G YR VT LP
Sbjct: 56 AFSEFIEKPFKGENLQIEYAK----------KKPEYAKKGL--------YRAKVTNLPEG 97
Query: 121 ASWQDLKDHMRRAGDV--CFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNA 175
+WQD KD +R V F ++ +D + ++++S DD+ AI +L + ++++
Sbjct: 98 TAWQDFKDFIRDEVKVHPTFVRIPQDEPTIC-YLEFSSEDDLTAAIEQLGQLQYKDV 153
>gi|225706912|gb|ACO09302.1| Splicing factor, arginine/serine-rich 7 [Osmerus mordax]
Length = 208
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG+L E+E F YGP+ + + PPG+AF+E+ED RDAEDA++G DG
Sbjct: 17 VYVGDLGNGAAKGELERAFSYYGPLRSV--WVARNPPGFAFVEYEDTRDAEDAVKGMDGK 74
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R S
Sbjct: 75 VLCGARIRVELSTGMSRKS 93
>gi|346468811|gb|AEO34250.1| hypothetical protein [Amblyomma maculatum]
Length = 161
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG L E+E+ F YGP+ ++ + PPG+AF+EFED RDA DA+R DG
Sbjct: 23 VYVGELGNSGTKHELEEAFGYYGPLRNV--WVARSPPGFAFVEFEDARDARDAVRALDGK 80
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R+S
Sbjct: 81 MLCGRRVRVELSTGKSRNS 99
>gi|339243139|ref|XP_003377495.1| splicing factor, arginine/serine-rich 3 [Trichinella spiralis]
gi|316973698|gb|EFV57260.1| splicing factor, arginine/serine-rich 3 [Trichinella spiralis]
Length = 163
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 53/82 (64%), Gaps = 2/82 (2%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
S +YVG LP E+E++F ++GP+ ++ + RP G+AF+EFED RDA DA+R
Sbjct: 34 SDCKVYVGGLPERASRGELEEIFGRFGPLRNV--WVARRPWGFAFVEFEDARDAIDAVRQ 91
Query: 65 RDGYNFDGYRLRVELAHGGRRH 86
DG G R RVEL+HG RR+
Sbjct: 92 LDGSRMCGVRARVELSHGQRRN 113
>gi|148706557|gb|EDL38504.1| mCG17902, isoform CRA_c [Mus musculus]
Length = 266
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
S +YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG
Sbjct: 37 SETKVYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRG 94
Query: 65 RDGYNFDGYRLRVELAHGGRRHS 87
DG G R+RVEL+ G R S
Sbjct: 95 LDGKVICGSRVRVELSTGMPRRS 117
>gi|168038912|ref|XP_001771943.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676725|gb|EDQ63204.1| predicted protein [Physcomitrella patens subsp. patens]
gi|448878393|gb|AGE46159.1| arginine/serine-rich splicing factor RS27 transcript I
[Physcomitrella patens subsp. patens]
Length = 233
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 105/252 (41%), Gaps = 42/252 (16%)
Query: 7 RTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRD 66
R +Y GN D R E+E LF +YG + +D+K G++F+ ED RDAEDAIR D
Sbjct: 6 RPVYCGNFEYDARQSEIERLFKEYGRVERVDMKT-----GFSFIYMEDERDAEDAIRHLD 60
Query: 67 GYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGL--------- 117
F R R+ + ++ G + RR D R T L
Sbjct: 61 NMEFGRQRRRLSV---------------EWAKQGDGAIRRREDARRNNTKLRPSKTLFVV 105
Query: 118 ---PSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRN 174
P + +DL+ H G + Q+ ++ G V Y + D+ A+ + S+ +
Sbjct: 106 NFDPINTRVRDLERHFEPYGKLVRVQIRKN----FGFVQYETQDEATKALESTNMSKVMD 161
Query: 175 AFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYSPR 234
RE S R S S Y SR SP Y R RSP R S R+RS R
Sbjct: 162 RVITVEYAAREDGEPPSSGRGGSPSRYRGSSRG-SPSYGRDRSPVRG---SGRNRSPPAR 217
Query: 235 GKYSRRSPSLSP 246
G+ RSP P
Sbjct: 218 GRS--RSPDYRP 227
>gi|392879762|gb|AFM88713.1| Splicing factor, arginine/serine-rich 3 [Callorhinchus milii]
Length = 164
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + + PPG+AF+EFED RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDASDAVRELDGR 69
Query: 69 NFDGYRLRVELAHGGRRHS 87
+ G R+RVEL++G RR +
Sbjct: 70 SLCGCRVRVELSNGERRRA 88
>gi|148706561|gb|EDL38508.1| mCG17902, isoform CRA_g [Mus musculus]
Length = 165
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
S +YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG
Sbjct: 37 SETKVYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRG 94
Query: 65 RDGYNFDGYRLRVELAHGGRRHS 87
DG G R+RVEL+ G R S
Sbjct: 95 LDGKVICGSRVRVELSTGMPRRS 117
>gi|221122641|ref|XP_002154006.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Hydra
magnipapillata]
Length = 259
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 90/176 (51%), Gaps = 18/176 (10%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
LYVG L R+++ F YG I DI +K GYAF++F+DYRDA+DA+ +G
Sbjct: 4 LYVGRLNNRVIERDLKKFFDNYGKIRDIMMK-----NGYAFVDFDDYRDADDAVYDLNGK 58
Query: 69 NFDGYRLRVELAHGGRRHSSSM----DRYSSYSSGGSR--------GVSRRSDYRVLVTG 116
G R+ +E A G R S +R+ SG R G R+ + + V
Sbjct: 59 ELMGDRVIIEHAKGIERGSGGAPYGRERFKDDRSGFGRKQRARDKYGPPVRTKWMLRVEN 118
Query: 117 LPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
L S SWQDLKD+ R +V ++ R G+ I ++Y+DMK IRK+D +E
Sbjct: 119 LSSRVSWQDLKDYCRPHAEVTYADAHRKERGVACIC-TSTYEDMKNLIRKIDNTEL 173
>gi|392877166|gb|AFM87415.1| Splicing factor, arginine/serine-rich 3 [Callorhinchus milii]
Length = 164
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + + PPG+AF+EFED RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDASDAVRELDGR 69
Query: 69 NFDGYRLRVELAHGGRRHS 87
+ G R+RVEL++G RR +
Sbjct: 70 SLCGCRVRVELSNGERRRA 88
>gi|18412169|ref|NP_567120.1| arginine/serine-rich-splicing factor RSP31 [Arabidopsis thaliana]
gi|26454661|sp|P92964.2|RSP31_ARATH RecName: Full=Arginine/serine-rich-splicing factor RSP31
gi|16612268|gb|AAL27502.1|AF439831_1 AT3g61860/F21F14_30 [Arabidopsis thaliana]
gi|21928093|gb|AAM78075.1| AT3g61860/F21F14_30 [Arabidopsis thaliana]
gi|332646749|gb|AEE80270.1| arginine/serine-rich-splicing factor RSP31 [Arabidopsis thaliana]
Length = 264
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 101/227 (44%), Gaps = 27/227 (11%)
Query: 7 RTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRD 66
R ++VGN +TR ++E LF KYG + +D+K GYAF+ FED RDAEDAIR D
Sbjct: 2 RPVFVGNFEYETRQSDLERLFDKYGRVDRVDMKS-----GYAFVYFEDERDAEDAIRKLD 56
Query: 67 GYNFDGY---RLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVL--VTGLPSSA 121
+ F GY RL VE A G R G ++ S + L + P
Sbjct: 57 NFPF-GYEKRRLSVEWAKGER----------GRPRGDAKAPSNLKPTKTLFVINFDPIRT 105
Query: 122 SWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYV 181
D++ H G V ++ R+ V + + +D A+ RS+ +
Sbjct: 106 KEHDIEKHFEPYGKVTNVRIRRN----FSFVQFETQEDATKALEATQRSKILDRVVSVEY 161
Query: 182 RVREYDSR--RSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSP 226
+++ D R R+ RSP RS R SP Y R SP + SP
Sbjct: 162 ALKDDDERDDRNGGRSPRRSLSPVYRRRPSPDYGRRPSPGQGRRPSP 208
>gi|71162370|sp|Q8BL97.1|SRSF7_MOUSE RecName: Full=Serine/arginine-rich splicing factor 7; AltName:
Full=Splicing factor, arginine/serine-rich 7
gi|26337671|dbj|BAC32521.1| unnamed protein product [Mus musculus]
Length = 267
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
S +YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG
Sbjct: 38 SETKVYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRG 95
Query: 65 RDGYNFDGYRLRVELAHGGRRHS 87
DG G R+RVEL+ G R S
Sbjct: 96 LDGKVICGSRVRVELSTGMPRRS 118
>gi|224063963|ref|XP_002301323.1| predicted protein [Populus trichocarpa]
gi|222843049|gb|EEE80596.1| predicted protein [Populus trichocarpa]
Length = 264
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 99/215 (46%), Gaps = 28/215 (13%)
Query: 7 RTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRD 66
+ ++ GNL D R +VE LF +YG I +D+K G+AF+ ED RDAEDAIR D
Sbjct: 2 KAIFCGNLDYDARQSDVERLFRRYGRIDRVDMK-----SGFAFVYMEDERDAEDAIRRLD 56
Query: 67 GYNF--DGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQ 124
F G RLRVE R + R SS + S+ + ++ P +
Sbjct: 57 QTEFGRKGRRLRVEWTKQERDSKPAGSRRSSANMTPSKTL-------FVINFDPIHTRTR 109
Query: 125 DLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVR 184
DL+ H G + +++ R+ V Y +D A+ + S+ + R
Sbjct: 110 DLERHFDPYGKILSTRIRRN----FAFVQYELQEDATKALEATNMSKLMDRVISVEYAAR 165
Query: 185 EYDSRRS-YS-------RSPSRSPYYSRSRSRSPY 211
+ D RR+ YS RSP R+ YSR RS SPY
Sbjct: 166 DDDERRNGYSPERRGRDRSPDRN--YSRERSPSPY 198
>gi|387916036|gb|AFK11627.1| Splicing factor, arginine/serine-rich 3 [Callorhinchus milii]
Length = 168
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + + PPG+AF+EFED RDA DA+R DG
Sbjct: 16 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDASDAVRELDGR 73
Query: 69 NFDGYRLRVELAHGGRRHS 87
+ G R+RVEL++G RR +
Sbjct: 74 SLCGCRVRVELSNGERRRA 92
>gi|195338789|ref|XP_002036006.1| GM13734 [Drosophila sechellia]
gi|194129886|gb|EDW51929.1| GM13734 [Drosophila sechellia]
Length = 226
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
S R +YVG+L + R ++E +F YG + + I PPG+AF+EFE RDA DA+RG
Sbjct: 6 SDRKVYVGDLGNNARKNDLEYVFGAYGSLRSV--WIARNPPGFAFVEFESARDAADAVRG 63
Query: 65 RDGYNFDGYRLRVELAHG 82
DG G R RVEL+ G
Sbjct: 64 LDGRTVCGRRARVELSTG 81
>gi|325179817|emb|CCA14220.1| RNA binding protein putative [Albugo laibachii Nc14]
Length = 360
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 87/185 (47%), Gaps = 22/185 (11%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVD-IDLKIPPRPPGYAFLEFEDYRDAE 59
M + R +YVGNL + ++++D G + + +++ R G + + +A+
Sbjct: 64 MEVVTGRRVYVGNLSWKVKWQDLKDHMRSAGDVEHAVIMEVGGRSKGCGIVTYATESEAQ 123
Query: 60 DAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPS 119
+AI + DG ++ V DR + S+ R RV V LP
Sbjct: 124 NAIETLNDTELDGRKIFV-----------REDREENASA-----QPRAKGCRVYVGNLPW 167
Query: 120 SASWQDLKDHMRRAGDVCFSQVFRDRGGMT---GIVDYTSYDDMKYAIRKLDRSEF--RN 174
+ WQ LKDHM++AG V + V + GG + G+V++++ D+ + AI L+ +E RN
Sbjct: 168 TVKWQALKDHMKQAGTVIHADVLEEAGGWSKGCGLVEFSTPDEAQNAIDMLNDTELEGRN 227
Query: 175 AFSRS 179
F R
Sbjct: 228 IFVRE 232
Score = 44.3 bits (103), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 7 RTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPP--RPPGYAFLEFEDYRDAEDAIRG 64
+ +YVGNLP DT R +E+LF G + ++ P R G+ ++F+ +A+ AI
Sbjct: 282 KQVYVGNLPWDTTSRNLENLFQSAGDVERAEVVEFPDGRSRGFGIVKFKSSSEAQCAIDE 341
Query: 65 RDGYNFDGYRLRVEL 79
+G +G RL V L
Sbjct: 342 LNGTEHNGRRLEVRL 356
>gi|390176510|ref|XP_003736158.1| GA30013 [Drosophila pseudoobscura pseudoobscura]
gi|388858711|gb|EIM52231.1| GA30013 [Drosophila pseudoobscura pseudoobscura]
Length = 259
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
S R +YVG+L + R ++E +F YG + + I PPG+AF+EFE RDA DA+RG
Sbjct: 6 SDRKVYVGDLGNNARKNDLEYVFGAYGSLRSV--WIARNPPGFAFVEFESARDAADAVRG 63
Query: 65 RDGYNFDGYRLRVELAHG 82
DG G R RVEL+ G
Sbjct: 64 LDGRTVCGRRARVELSTG 81
>gi|395508189|ref|XP_003758396.1| PREDICTED: uncharacterized protein LOC100934570 [Sarcophilus
harrisii]
Length = 235
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
Query: 1 MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
S + +YVGNL E+E F YGP+ + I PPG+AF+EFED RDAED
Sbjct: 7 FCSLTETKVYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAED 64
Query: 61 AIRGRDGYNFDGYRLRVELAHGGRRHS 87
A+RG DG G R+RVEL+ G R S
Sbjct: 65 AVRGLDGKVICGSRVRVELSTGMPRRS 91
>gi|156354446|ref|XP_001623405.1| predicted protein [Nematostella vectensis]
gi|156210100|gb|EDO31305.1| predicted protein [Nematostella vectensis]
Length = 137
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+GN+ + RE+E F +GP+ D+ + PPG+AF FED RDAEDA+R DG
Sbjct: 4 VYIGNIGDNASKREIEREFETFGPLRDV--WVARNPPGFAFCVFEDRRDAEDAVRELDGR 61
Query: 69 NFDGYRLRVELAHG 82
G R RVELA G
Sbjct: 62 YICGQRARVELAKG 75
>gi|339246347|ref|XP_003374807.1| splicing factor, arginine/serine-rich 6 [Trichinella spiralis]
gi|316971934|gb|EFV55647.1| splicing factor, arginine/serine-rich 6 [Trichinella spiralis]
Length = 305
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 79/157 (50%), Gaps = 30/157 (19%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G LP R R+VED F YG I +I LK G+ F+EF+D RDA+DA+ +G
Sbjct: 92 VYIGRLPYRARERDVEDFFKGYGRIREILLK-----NGFGFVEFDDPRDADDAVYHLNGR 146
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRY-SSY-SSGGSRGVS---------------RRSDYR 111
G R+ VE+ +R D + SSY S GSRG S ++ +R
Sbjct: 147 ELCGERIIVEMT---KRPPKGRDAFRSSYRGSYGSRGFSPERRRRDRDDKYGPPSQTPWR 203
Query: 112 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM 148
+V+ + + SWQ H+R A CF Q+F G +
Sbjct: 204 CIVSNVSTRVSWQ----HLRMAQAKCF-QIFFSTGNV 235
>gi|388494340|gb|AFK35236.1| unknown [Medicago truncatula]
Length = 249
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 100/222 (45%), Gaps = 30/222 (13%)
Query: 7 RTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRD 66
R ++ GNL DTR E+E LF KYG I +D+K G+AF+ +ED RDAE+AIR D
Sbjct: 2 RPVFAGNLEYDTRQSELERLFSKYGRIERVDMK-----SGFAFVYYEDERDAEEAIRALD 56
Query: 67 GYNF--DGYRLRVELAHGGR-RHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASW 123
F D RL VE A G R RH GS+ + + ++ P
Sbjct: 57 NIPFGHDKRRLSVEWARGERGRHRD-----------GSKPNQKPTKTLFVINFDPIRTRV 105
Query: 124 QDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRN-AFSRSYVR 182
D++ H + G + ++ R+ V Y + +D A+ + S+ + S Y
Sbjct: 106 SDIERHFKPYGPLHHVRIRRN----FAFVQYETQEDATKALECTNMSKILDRVVSVEYAL 161
Query: 183 VREYDSRRSYSRSPSRSPYYSRS------RSRSPYYSRSRSP 218
+ D +Y SP R +RS R SP Y R RSP
Sbjct: 162 RDDSDRVDNYGGSPRRGGGLARSPSPGYRRRPSPDYGRPRSP 203
>gi|217072928|gb|ACJ84824.1| unknown [Medicago truncatula]
Length = 242
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 100/222 (45%), Gaps = 30/222 (13%)
Query: 7 RTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRD 66
R ++ GNL DTR E+E LF KYG I +D+K G+AF+ +ED RDAE+AIR D
Sbjct: 2 RPVFAGNLEYDTRQSELERLFSKYGRIERVDMK-----SGFAFVYYEDERDAEEAIRALD 56
Query: 67 GYNF--DGYRLRVELAHGGR-RHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASW 123
F D RL VE A G R RH GS+ + + ++ P
Sbjct: 57 NIPFGHDKRRLSVEWARGERGRHRD-----------GSKPNQKPTKTLFVINFDPIRTRV 105
Query: 124 QDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRN-AFSRSYVR 182
D++ H + G + ++ R+ V Y + +D A+ + S+ + S Y
Sbjct: 106 SDIERHFKPYGPLHHVRIRRN----FAFVQYETQEDATKALECTNMSKILDRVVSVEYAL 161
Query: 183 VREYDSRRSYSRSP------SRSPYYSRSRSRSPYYSRSRSP 218
+ D +Y SP +RSP R SP Y R RSP
Sbjct: 162 RDDSDRVDNYGGSPRRGGGLARSPSPGYRRRPSPDYGRPRSP 203
>gi|428672140|gb|EKX73055.1| RNA recognition motif domain containing protein [Babesia equi]
Length = 158
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Query: 2 SSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDA 61
S + LYVGNL DT +++ LF ++G + ++ + RPPG+AF+ FED RDA DA
Sbjct: 6 ESMEGKRLYVGNLNEDTTTDQIDSLFSRFGILTNV--WVARRPPGFAFVTFEDPRDASDA 63
Query: 62 IRGRDGYNFDGYRLRVELAHGGR 84
I +G F G LRVE G R
Sbjct: 64 IAELNGREFQGTTLRVEYCKGAR 86
>gi|209155708|gb|ACI34086.1| Splicing factor, arginine/serine-rich 7 [Salmo salar]
Length = 129
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFGYYGPLRTV--WIARNPPGFAFVEFEDTRDAEDAVRGLDGK 70
Query: 69 NFDGYRLRVELAHG 82
G R+RVEL+ G
Sbjct: 71 LISGSRVRVELSTG 84
>gi|388506284|gb|AFK41208.1| unknown [Medicago truncatula]
Length = 249
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 100/222 (45%), Gaps = 30/222 (13%)
Query: 7 RTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRD 66
R ++ GNL DTR E+E LF KYG I +D+K G+AF+ +ED RDAE+AIR D
Sbjct: 2 RPVFAGNLEYDTRQSELERLFSKYGRIERVDMK-----SGFAFVYYEDERDAEEAIRALD 56
Query: 67 GYNF--DGYRLRVELAHGGR-RHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASW 123
F D RL VE A G R RH GS+ + + ++ P
Sbjct: 57 NIPFGHDKRRLSVEWARGERGRHRD-----------GSKPNQKPTKTLFVINFDPIRTRV 105
Query: 124 QDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRN-AFSRSYVR 182
D++ H + G + ++ R+ V Y + +D A+ + S+ + S Y
Sbjct: 106 SDIERHFKPYGPLHHVRIRRN----FAFVQYETQEDATKALECTNMSKILDRVVSVEYAL 161
Query: 183 VREYDSRRSYSRSPSRSPYYSRS------RSRSPYYSRSRSP 218
+ D +Y SP R +RS R SP Y R RSP
Sbjct: 162 RDDSDRVDNYGGSPRRGGGLARSPSPGYRRRPSPDYGRPRSP 203
>gi|442761097|gb|JAA72707.1| Putative splicing factor sc35, partial [Ixodes ricinus]
Length = 226
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 57/97 (58%), Gaps = 7/97 (7%)
Query: 1 MSSRSSR----TLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKI---PPRPPGYAFLEFE 53
SSR SR +L++ N+P TR ++ LF KYGPI D+ + + RP G+A+++FE
Sbjct: 22 CSSRYSRPPNSSLFIRNVPDGTRPEDLRSLFGKYGPITDVYIPVDYYARRPRGFAYVQFE 81
Query: 54 DYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 90
D RDAEDA+ D F G L +E A G R+ S M
Sbjct: 82 DLRDAEDAMYSLDRTRFYGRELEIEFAQGDRKTPSEM 118
>gi|110767678|ref|XP_001122800.1| PREDICTED: serine/arginine-rich splicing factor 7 [Apis
mellifera]
gi|380013414|ref|XP_003690755.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Apis
florea]
Length = 206
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG+L +E+ED F YG + ++ + PPG+AF+EFED RDAEDAIRG DG
Sbjct: 13 VYVGDLGSGATKQELEDAFSYYGSLRNV--WVARNPPGFAFVEFEDARDAEDAIRGLDGR 70
Query: 69 NFDGYRLRVELAHGGR 84
G R RVE ++G R
Sbjct: 71 TICGRRARVEPSNGRR 86
>gi|341889018|gb|EGT44953.1| hypothetical protein CAEBREN_15444 [Caenorhabditis brenneri]
gi|341896973|gb|EGT52908.1| hypothetical protein CAEBREN_18115 [Caenorhabditis brenneri]
Length = 305
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 86/188 (45%), Gaps = 38/188 (20%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L +++E F YG I D+ LK G+ F+EF+D RDAEDA+ +G
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGNIRDVLLK-----NGFGFVEFDDKRDAEDAVHDLNGK 59
Query: 69 NFDGYRLRVELAH---------------------GGRRHSSSMDRYSSYSSGG-SRGVSR 106
G R+ ++ + GG + DRY + GG R SR
Sbjct: 60 ELGGERVILDYSKPRGGGGFGGSGGRGGRVSSYSGG---AGGRDRYDRFDRGGPPRRESR 116
Query: 107 -----RSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDM 160
+ +RVLV L S SWQDLKD +RR G + +++ + ++ + + D+
Sbjct: 117 YGRPYSTRHRVLVENLSSRISWQDLKDQVRRQGVEPTYAEAHKRPN--EALLCFATPSDL 174
Query: 161 KYAIRKLD 168
K I K D
Sbjct: 175 KRCIEKCD 182
>gi|84997688|ref|XP_953565.1| hypothetical protein [Theileria annulata]
gi|65304562|emb|CAI72887.1| hypothetical protein, conserved [Theileria annulata]
Length = 732
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 78/159 (49%), Gaps = 19/159 (11%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+++GNL GD E+ D F +GPI ID + +AF+++ +DA+ AIR
Sbjct: 537 IFIGNLSGDVTQEELTDKFSSFGPINRIDFR-----RKFAFIDYVRSKDADAAIRDMHNK 591
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
G L+V+ H R SS S +++ V+ L S SWQDLKD
Sbjct: 592 FIWGSYLKVQP------HIDQNKRLSSRDPKPS--------FQITVSNLDQSVSWQDLKD 637
Query: 129 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKL 167
R+AGDV ++ + G+++YT+ ++ A+ +L
Sbjct: 638 FGRQAGDVHYTSIIIKGDKRFGLIEYTNEQSVQKAMNEL 676
>gi|6899884|emb|CAB71893.1| ARGININE/SERINE-RICH SPLICING FACTOR RSP31 [Arabidopsis thaliana]
Length = 271
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 101/227 (44%), Gaps = 27/227 (11%)
Query: 7 RTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRD 66
R ++VGN +TR ++E LF KYG + +D+K GYAF+ FED RDAEDAIR D
Sbjct: 2 RPVFVGNFEYETRQSDLERLFDKYGRVDRVDMK-----SGYAFVYFEDERDAEDAIRKLD 56
Query: 67 GYNFDGY---RLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVL--VTGLPSSA 121
+ F GY RL VE A G R G ++ S + L + P
Sbjct: 57 NFPF-GYEKRRLSVEWAKGER----------GRPRGDAKAPSNLKPTKTLFVINFDPIRT 105
Query: 122 SWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYV 181
D++ H G V ++ R+ V + + +D A+ RS+ +
Sbjct: 106 KEHDIEKHFEPYGKVTNVRIRRN----FSFVQFETQEDATKALEATQRSKILDRVVSVEY 161
Query: 182 RVREYDSR--RSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSP 226
+++ D R R+ RSP RS R SP Y R SP + SP
Sbjct: 162 ALKDDDERDDRNGGRSPRRSLSPVYRRRPSPDYGRRPSPGQGRRPSP 208
>gi|147900017|ref|NP_001086749.1| serine/arginine-rich splicing factor 7 [Xenopus laevis]
gi|50603927|gb|AAH77393.1| MGC81677 protein [Xenopus laevis]
Length = 234
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDTRDAEDAVRGLDGK 70
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R S
Sbjct: 71 VICGSRVRVELSTGMPRRS 89
>gi|354484028|ref|XP_003504193.1| PREDICTED: serine/arginine-rich splicing factor 3-like
[Cricetulus griseus]
gi|344255990|gb|EGW12094.1| Splicing factor, arginine/serine-rich 3 [Cricetulus griseus]
Length = 164
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + + PPG+AF+EFED RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELEHAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 69 NFDGYRLRVELAHGGRR 85
G R+RVEL++G +R
Sbjct: 70 TLCGCRVRVELSNGEKR 86
>gi|417396073|gb|JAA45070.1| Putative splicing factor arginine/serine-rich 3 isoform cra c
[Desmodus rotundus]
Length = 135
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + + PPG+AF+EFED RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 69 NFDGYRLRVELAHGGRR 85
G R+RVEL++G +R
Sbjct: 70 TLCGCRVRVELSNGEKR 86
>gi|253723275|pdb|2I38|A Chain A, Solution Structure Of The Rrm Of Srp20
Length = 150
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + + PPG+AF+EFED RDA DA+R DG
Sbjct: 76 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRDLDGR 133
Query: 69 NFDGYRLRVELAHGGRR 85
G R+RVEL++G +R
Sbjct: 134 TLCGCRVRVELSNGEKR 150
>gi|25144924|ref|NP_741448.1| Protein RSP-6, isoform c [Caenorhabditis elegans]
gi|351058801|emb|CCD66576.1| Protein RSP-6, isoform c [Caenorhabditis elegans]
Length = 118
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVG LP D +E+E++F ++G I + + RPPG+AF+E++D RDAEDA+R DG
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIRKV--WVARRPPGFAFVEYDDVRDAEDAVRALDGS 62
Query: 69 NFDGYRLRVEL 79
G R RVEL
Sbjct: 63 RICGVRARVEL 73
>gi|288806618|gb|ADC54214.1| RE57382p [Drosophila melanogaster]
Length = 178
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 45/71 (63%), Gaps = 2/71 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F KYGP+ ++ + PPG+AF+EFED RDAEDA R DG
Sbjct: 56 VYVGNLGSSASKHEIEGAFAKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRALDGT 113
Query: 69 NFDGYRLRVEL 79
G R+RVE+
Sbjct: 114 RCCGTRIRVEM 124
>gi|148223523|ref|NP_001086618.1| MGC78845 protein [Xenopus laevis]
gi|50603914|gb|AAH77185.1| MGC78845 protein [Xenopus laevis]
Length = 224
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDTRDAEDAVRGLDGK 70
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R S
Sbjct: 71 VICGSRVRVELSTGMPRRS 89
>gi|432856730|ref|XP_004068509.1| PREDICTED: serine/arginine-rich splicing factor 3-like isoform 1
[Oryzias latipes]
Length = 166
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + + PPG+AF+EFED RDA DA+R DG
Sbjct: 11 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDATDAVRELDGR 68
Query: 69 NFDGYRLRVELAHGGRRHSS 88
G R+RVEL++G +R S
Sbjct: 69 TLCGCRVRVELSNGEKRSRS 88
>gi|253722541|pdb|2I2Y|A Chain A, Solution Structure Of The Rrm Of Srp20 Bound To The Rna
Cauc
Length = 150
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + + PPG+AF+EFED RDA DA+R DG
Sbjct: 76 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRELDGR 133
Query: 69 NFDGYRLRVELAHGGRR 85
G R+RVEL++G +R
Sbjct: 134 TLCGCRVRVELSNGEKR 150
>gi|432857012|ref|XP_004068510.1| PREDICTED: serine/arginine-rich splicing factor 3-like isoform 2
[Oryzias latipes]
Length = 182
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + + PPG+AF+EFED RDA DA+R DG
Sbjct: 11 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDATDAVRELDGR 68
Query: 69 NFDGYRLRVELAHGGRR 85
G R+RVEL++G +R
Sbjct: 69 TLCGCRVRVELSNGEKR 85
>gi|442626458|ref|NP_001260168.1| x16, isoform B [Drosophila melanogaster]
gi|440213469|gb|AGB92704.1| x16, isoform B [Drosophila melanogaster]
Length = 257
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
S R +YVG+L + R ++E +F YG + + I PPG+AF+EFE RDA DA+RG
Sbjct: 6 SDRKVYVGDLGNNARKNDLEYVFGAYGSLRSV--WIARNPPGFAFVEFESARDAADAVRG 63
Query: 65 RDGYNFDGYRLRVELAHG 82
DG G R RVEL+ G
Sbjct: 64 LDGRTVCGRRARVELSTG 81
>gi|1707366|emb|CAA67798.1| splicing factor [Arabidopsis thaliana]
Length = 264
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 101/227 (44%), Gaps = 27/227 (11%)
Query: 7 RTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRD 66
R ++VGN +TR ++E LF KYG + +D+K GYAF+ FED RDAEDAIR D
Sbjct: 2 RPVFVGNFEYETRQSDLERLFDKYGRVDRVDMKS-----GYAFVYFEDERDAEDAIRKLD 56
Query: 67 GYNFDGY---RLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVL--VTGLPSSA 121
+ F GY +L VE A G R G ++ S + L + P
Sbjct: 57 NFPF-GYEKRKLSVEWAKGER----------GRPRGDAKAPSNLKPTKTLFVINFDPIRT 105
Query: 122 SWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYV 181
D++ H G V ++ R+ V + + +D A+ RS+ +
Sbjct: 106 KEHDIEKHFEPYGKVTNVRIRRN----FSFVQFETQEDATKALEATQRSKILDRVVSVEY 161
Query: 182 RVREYDSR--RSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSP 226
+++ D R R+ RSP RS R SP Y R SP + SP
Sbjct: 162 ALKDDDERDDRNGGRSPRRSLSPVYRRRPSPDYGRRPSPGQGRRPSP 208
>gi|390473557|ref|XP_003734621.1| PREDICTED: serine/arginine-rich splicing factor 10-like
[Callithrix jacchus]
Length = 262
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 54/88 (61%), Gaps = 7/88 (7%)
Query: 8 TLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPP-----RPPGYAFLEFEDYRDAEDAI 62
+L+V N+ DTR ++ F +YGPIVD+ +PP RP G+A+++FED RDAEDA+
Sbjct: 11 SLFVRNVANDTRSEDLRREFGRYGPIVDV--YVPPDFYTRRPRGFAYVQFEDVRDAEDAL 68
Query: 63 RGRDGYNFDGYRLRVELAHGGRRHSSSM 90
R D G ++ ++ A G R+ + M
Sbjct: 69 RNLDRKWICGRQMEIQFAQGDRKTPNQM 96
>gi|294899382|ref|XP_002776614.1| arginine/serine-rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239883668|gb|EER08430.1| arginine/serine-rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 138
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 4/82 (4%)
Query: 110 YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDR 169
YRV+VT LP ASWQDLKD MR AG+ F++V RD G+ G + D++ A+R LD
Sbjct: 41 YRVVVTNLPRGASWQDLKDKMRDAGECRFTEVTRDGVGVAG---FAGQSDVERAVRTLDD 97
Query: 170 SEFRNAF-SRSYVRVREYDSRR 190
+E ++ F S +RV E+ +
Sbjct: 98 TEMKSHFGDTSIIRVEEFTDEK 119
>gi|149422794|ref|XP_001506905.1| PREDICTED: serine/arginine-rich splicing factor 7-like, partial
[Ornithorhynchus anatinus]
Length = 228
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG DG
Sbjct: 3 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 60
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R S
Sbjct: 61 VICGSRVRVELSTGMPRRS 79
>gi|148223201|ref|NP_001080460.1| serine/arginine-rich splicing factor 3 [Xenopus laevis]
gi|28302173|gb|AAH46661.1| Sfrs3-prov protein [Xenopus laevis]
Length = 191
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + + PPG+AF+EFED RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDLRDAADAVRELDGR 69
Query: 69 NFDGYRLRVELAHGGRR 85
G R+RVEL++G +R
Sbjct: 70 TLCGCRVRVELSNGEKR 86
>gi|242012315|ref|XP_002426878.1| arginine/serine-rich splicing factor, putative [Pediculus humanus
corporis]
gi|212511107|gb|EEB14140.1| arginine/serine-rich splicing factor, putative [Pediculus humanus
corporis]
Length = 192
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 61/105 (58%), Gaps = 13/105 (12%)
Query: 3 SRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAI 62
S S +YVG+L +++ED F YGP+ ++ + PPG+AF+EFED RDA+DA+
Sbjct: 7 SGSDCKVYVGDLGSSASKQDLEDAFGYYGPLKNV--WVARHPPGFAFVEFEDPRDADDAV 64
Query: 63 RGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRR 107
RG DG + G R+RVE ++G R G RGVSRR
Sbjct: 65 RGLDGRSIAGRRVRVEPSNGMARR-----------RGRDRGVSRR 98
>gi|355718921|gb|AES06431.1| splicing factor, arginine/serine-rich 3 [Mustela putorius furo]
Length = 150
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + + PPG+AF+EFED RDA DA+R DG
Sbjct: 49 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRELDGR 106
Query: 69 NFDGYRLRVELAHGGRR 85
G R+RVEL++G +R
Sbjct: 107 TLCGCRVRVELSNGEKR 123
>gi|24582360|ref|NP_723226.1| x16, isoform A [Drosophila melanogaster]
gi|7243686|gb|AAF43414.1|AF232774_1 SR family splicing factor 9G8 [Drosophila melanogaster]
gi|6433840|emb|CAB60724.1| DXl6 protein [Drosophila melanogaster]
gi|7297188|gb|AAF52454.1| x16, isoform A [Drosophila melanogaster]
gi|20152051|gb|AAM11385.1| LD46359p [Drosophila melanogaster]
gi|220946366|gb|ACL85726.1| xl6-PA [synthetic construct]
gi|220956098|gb|ACL90592.1| xl6-PA [synthetic construct]
Length = 258
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 5 SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
S R +YVG+L + R ++E +F YG + + I PPG+AF+EFE RDA DA+RG
Sbjct: 6 SDRKVYVGDLGNNARKNDLEYVFGAYGSLRSV--WIARNPPGFAFVEFESARDAADAVRG 63
Query: 65 RDGYNFDGYRLRVELAHG 82
DG G R RVEL+ G
Sbjct: 64 LDGRTVCGRRARVELSTG 81
>gi|281345554|gb|EFB21138.1| hypothetical protein PANDA_005614 [Ailuropoda melanoleuca]
Length = 319
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 81/165 (49%), Gaps = 23/165 (13%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+Y+G L + R ++++ F YG +++IDLK + E RG
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLK-------------NGHGTPERXXRG---- 46
Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLK 127
V LA G S +SG + G R+++R++V L S SWQDLK
Sbjct: 47 ----LGCGVCLARVGVFGGGGGGYSSRRTSGRDKYGPPVRTEFRLIVENLSSRCSWQDLK 102
Query: 128 DHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
D MR+AG+V ++ ++R G++++ SY DMK A+ KLD +E
Sbjct: 103 DFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 146
>gi|417397587|gb|JAA45827.1| Putative serine/arginine-rich splicing factor 7 [Desmodus
rotundus]
Length = 235
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R S
Sbjct: 71 VICGSRVRVELSTGMPRRS 89
>gi|327262671|ref|XP_003216147.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Anolis carolinensis]
Length = 235
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R S
Sbjct: 71 VICGSRVRVELSTGMPRRS 89
>gi|328908705|gb|AEB61020.1| serine/arginine-rich splicing factor 7-like protein [Equus
caballus]
Length = 238
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL E+E F YGP+ + I PPG+AF+EFED RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIAGNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 NFDGYRLRVELAHGGRRHS 87
G R+RVEL+ G R S
Sbjct: 71 VICGSRVRVELSTGMPRRS 89
>gi|149640565|ref|XP_001509029.1| PREDICTED: serine/arginine-rich splicing factor 3-like
[Ornithorhynchus anatinus]
Length = 164
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + + PPG+AF+EFED RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 69 NFDGYRLRVELAHGGRRH 86
G R+RVEL++G +R+
Sbjct: 70 TLCGCRVRVELSNGEKRN 87
>gi|291396115|ref|XP_002714714.1| PREDICTED: splicing factor, arginine/serine-rich 3 [Oryctolagus
cuniculus]
gi|297290700|ref|XP_001112817.2| PREDICTED: splicing factor, arginine/serine-rich 3-like [Macaca
mulatta]
gi|2125864|emb|CAA62845.1| Srp20 [Mus musculus]
gi|74139694|dbj|BAE31698.1| unnamed protein product [Mus musculus]
gi|74214717|dbj|BAE31197.1| unnamed protein product [Mus musculus]
gi|74220550|dbj|BAE31490.1| unnamed protein product [Mus musculus]
gi|119624303|gb|EAX03898.1| splicing factor, arginine/serine-rich 3, isoform CRA_a [Homo
sapiens]
gi|148690656|gb|EDL22603.1| mCG21131, isoform CRA_a [Mus musculus]
gi|149043498|gb|EDL96949.1| rCG61099, isoform CRA_b [Rattus norvegicus]
gi|194385252|dbj|BAG65003.1| unnamed protein product [Homo sapiens]
Length = 124
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + + PPG+AF+EFED RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 69 NFDGYRLRVELAHGGRR 85
G R+RVEL++G +R
Sbjct: 70 TLCGCRVRVELSNGEKR 86
>gi|392333750|ref|XP_003752989.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Rattus
norvegicus]
gi|392354119|ref|XP_003751684.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Rattus
norvegicus]
Length = 147
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 9 LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + + PPG+AF+EFED RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 69 NFDGYRLRVELAHGGRR 85
G R+RVEL++G +R
Sbjct: 70 TLCGCRVRVELSNGEKR 86
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.133 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,737,438,060
Number of Sequences: 23463169
Number of extensions: 215527942
Number of successful extensions: 1106643
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5367
Number of HSP's successfully gapped in prelim test: 17625
Number of HSP's that attempted gapping in prelim test: 859401
Number of HSP's gapped (non-prelim): 124905
length of query: 277
length of database: 8,064,228,071
effective HSP length: 140
effective length of query: 137
effective length of database: 9,074,351,707
effective search space: 1243186183859
effective search space used: 1243186183859
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 76 (33.9 bits)